BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= gi|254780171|ref|YP_003064584.1| ABC transporter membrane spanning protein (amino acid) [Candidatus Liberibacter asiaticus str. psy62] (398 letters) Database: nr 13,984,884 sequences; 4,792,584,752 total letters Searching..................................................done Results from round 1 >gi|254780171|ref|YP_003064584.1| ABC transporter membrane spanning protein (amino acid) [Candidatus Liberibacter asiaticus str. psy62] gi|254039848|gb|ACT56644.1| ABC transporter membrane spanning protein (amino acid) [Candidatus Liberibacter asiaticus str. psy62] Length = 398 Score = 801 bits (2070), Expect = 0.0, Method: Compositional matrix adjust. Identities = 398/398 (100%), Positives = 398/398 (100%) Query: 1 MIKNARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLG 60 MIKNARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLG Sbjct: 1 MIKNARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLG 60 Query: 61 IGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLS 120 IGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLS Sbjct: 61 IGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLS 120 Query: 121 ANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPT 180 ANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPT Sbjct: 121 ANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPT 180 Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL Sbjct: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240 Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA Sbjct: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300 Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT Sbjct: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK Sbjct: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 >gi|315122674|ref|YP_004063163.1| ABC transporter membrane spanning protein (amino acid) [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313496076|gb|ADR52675.1| ABC transporter membrane spanning protein (amino acid) [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 398 Score = 620 bits (1600), Expect = e-175, Method: Compositional matrix adjust. Identities = 301/398 (75%), Positives = 347/398 (87%) Query: 1 MIKNARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLG 60 M+KN + F MKFLYD+R+ +I +Q ++ ++T++ LW VNNV++NM KSNLSLG Sbjct: 1 MMKNIKSMFNHNFCEMKFLYDVRIRSILIQAVILSIVTMVILWLVNNVHHNMVKSNLSLG 60 Query: 61 IGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLS 120 IGFL ERAGFEIDQGI+PYTSDSSYA AI+VGF NTF +AF+G+IPATIIG LVG GRLS Sbjct: 61 IGFLKERAGFEIDQGIIPYTSDSSYAMAIVVGFSNTFMVAFAGIIPATIIGVLVGTGRLS 120 Query: 121 ANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPT 180 +NKLV+WICRVYVEVFRNIPPLVVIFF Y+SVLS+LPIP+HSI LP G+FLNNRG SFPT Sbjct: 121 SNKLVSWICRVYVEVFRNIPPLVVIFFWYRSVLSILPIPEHSISLPLGIFLNNRGFSFPT 180 Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240 L MD NAKI +FSFVLGI LS+F+ +LSR FH KTG+ LPL Y++ LI GLP LVL+AL Sbjct: 181 LIMDINAKIVLFSFVLGIALSIFSAKLSRQFHMKTGQTLPLFYVAVLLILGLPMLVLLAL 240 Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300 +QL+FDKPVLG+FNF GG T+ PEFMSLYIALSCYTA+FIAEI+R GLI+V RGQMEAA Sbjct: 241 NFQLYFDKPVLGKFNFTGGCTIGPEFMSLYIALSCYTASFIAEIIRLGLISVSRGQMEAA 300 Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 IALGLT KATRLV+LPQAMR IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG+IINQT Sbjct: 301 IALGLTPGKATRLVILPQAMRIIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGSIINQT 360 Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 GQAIEIILIWMFIYLSLSIMI+LFMN LN K+ALKE++ Sbjct: 361 GQAIEIILIWMFIYLSLSIMISLFMNWLNTKVALKERR 398 >gi|222148881|ref|YP_002549838.1| ABC transporter membrane spanning protein (amino acid) [Agrobacterium vitis S4] gi|221735867|gb|ACM36830.1| ABC transporter membrane spanning protein (amino acid) [Agrobacterium vitis S4] Length = 398 Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust. Identities = 206/382 (53%), Positives = 281/382 (73%), Gaps = 2/382 (0%) Query: 17 KFLYDMRVHNISVQIILALLLTVIFLWCV-NNVYNNMEKSNLSLGIGFLSERAGFEIDQG 75 +YD +V I Q++ L++ V F+W V NN +N++K+N++ G GFL R+GF+I Q Sbjct: 18 SLIYDPKVRGIFYQVV-TLVILVAFIWMVANNTIHNLQKANITSGFGFLQGRSGFDIGQQ 76 Query: 76 IVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEV 135 ++ Y+SDS+Y A+LVG +NT +A +G+I A+IIG VG GRLS N L+A +C+VYVE+ Sbjct: 77 LISYSSDSTYGRALLVGLLNTLQVAAAGIITASIIGFAVGLGRLSHNWLIAKLCQVYVEI 136 Query: 136 FRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFV 195 FRNIPPL+VIFF Y+ V+++LP SI LPF ++LNNRG++FP A + + + Sbjct: 137 FRNIPPLLVIFFWYRGVIAILPQARDSIALPFDIYLNNRGITFPKAIFGDEAWLLLPAIA 196 Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFN 255 +GIVLS+ + +R TG+ P+L+ S LI GLP LV +A+ L FD P++G+FN Sbjct: 197 IGIVLSILLRKWARKRQMATGQQFPILWSSLALILGLPVLVFMAIGMPLTFDLPIVGRFN 256 Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315 GGS V PEF SL++ALS YTAAFIAEIVR G+ AV +GQ EAA ALGL H +RL++ Sbjct: 257 MQGGSVVGPEFTSLFLALSFYTAAFIAEIVRGGIKAVSKGQTEAASALGLKHNHTSRLIV 316 Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375 +PQAMR IIPPLTSQYLNL KNSSLAVA+GFAD+V+VGGTI+NQTGQA+EI+ +W+ +YL Sbjct: 317 VPQAMRIIIPPLTSQYLNLAKNSSLAVAIGFADIVAVGGTILNQTGQAVEIVAVWLAVYL 376 Query: 376 SLSIMIALFMNRLNAKIALKEK 397 ++SI A+FMN NAK+AL E+ Sbjct: 377 TISISTAVFMNWFNAKMALVER 398 >gi|325292971|ref|YP_004278835.1| General L-amino acid transport system permease protein aapQ [Agrobacterium sp. H13-3] gi|325060824|gb|ADY64515.1| General L-amino acid transport system permease protein aapQ [Agrobacterium sp. H13-3] Length = 398 Score = 407 bits (1045), Expect = e-111, Method: Compositional matrix adjust. Identities = 210/389 (53%), Positives = 276/389 (70%), Gaps = 2/389 (0%) Query: 10 TRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWC-VNNVYNNMEKSNLSLGIGFLSERA 68 +R S +YD R+ I Q++ ++LT F+W V N N+++SN+S G GFL+ RA Sbjct: 11 SRAQSASSLIYDPRIRGIFYQVLTVVILTA-FVWIIVTNTITNLQRSNISSGFGFLNGRA 69 Query: 69 GFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWI 128 GF+I Q ++ YTSD++Y A+LVG +NT +AF G+I A+IIG +VG RLS N L++ + Sbjct: 70 GFDIGQSLIAYTSDATYGRALLVGILNTIQVAFFGIIAASIIGFIVGIARLSNNWLISKL 129 Query: 129 CRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188 + YVE+FRNIPPL+VIFF YK V+SVLP S+ LP G +LNNRG FP Sbjct: 130 AQAYVEIFRNIPPLLVIFFWYKGVISVLPQARDSLQLPLGTYLNNRGFFFPKPLWGEGTW 189 Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248 + +FV+ IV+S+F R ++ E+TG+ +T LI GLP +AL L FD Sbjct: 190 LIPLAFVVAIVISVFIYRWAKARQERTGEQFRTGITATLLIIGLPAATFLALGSPLTFDY 249 Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308 P+ G+FN GGS V+PEFMSL++ALS YTA+FIAEIVR G+ AV +GQ EAA ALGL Sbjct: 250 PIAGRFNLAGGSVVAPEFMSLFLALSFYTASFIAEIVRGGIKAVAKGQTEAAEALGLRAS 309 Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368 TRL+++PQAMR IIPPLTSQYLNL KNSSLAVAVGFAD+VSVGGTI+NQTGQA+E++ Sbjct: 310 TTTRLIVVPQAMRIIIPPLTSQYLNLTKNSSLAVAVGFADIVSVGGTILNQTGQAVEVVA 369 Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKEK 397 IW+ +YLSLSI+ A+ MN LNAK+AL E+ Sbjct: 370 IWLVLYLSLSILTAVVMNWLNAKMALVER 398 >gi|159184824|ref|NP_354576.2| ABC transporter, membrane spanning protein (amino acid) [Agrobacterium tumefaciens str. C58] gi|159140109|gb|AAK87361.2| ABC transporter, membrane spanning protein (amino acid) [Agrobacterium tumefaciens str. C58] Length = 398 Score = 401 bits (1031), Expect = e-110, Method: Compositional matrix adjust. Identities = 207/389 (53%), Positives = 272/389 (69%), Gaps = 2/389 (0%) Query: 10 TRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWC-VNNVYNNMEKSNLSLGIGFLSERA 68 +R S +YD R+ I Q++ ++LT F+W V N N+++SN+S G GFL RA Sbjct: 11 SRAQSASSLIYDPRIRGIFYQVLTVVILTA-FVWVIVTNTITNLQRSNISSGFGFLDGRA 69 Query: 69 GFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWI 128 GF+I Q ++ YTSDS+Y A++VG +NT +AF G+I A+IIG +VG RLS N L++ + Sbjct: 70 GFDIGQSLIAYTSDSTYGRALIVGILNTIQVAFFGIIAASIIGFIVGIARLSNNWLISKL 129 Query: 129 CRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188 + YVE+FRNIPPL+VIFF YK V+SVLP S+ LP G +LNNRG FP Sbjct: 130 AQAYVEIFRNIPPLLVIFFWYKGVISVLPQARDSLELPLGSYLNNRGFFFPKPLWGEGTW 189 Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248 + +F++ IV+S F R ++ E+TG+ + LI GLP +AL L FD Sbjct: 190 LIPLAFLVAIVISFFVYRWAKARQEQTGQQFRTGITAALLIIGLPAATFLALGSPLTFDY 249 Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308 P+ G+FN GGS V+PEFMSL++ALS YTA+FIAEIVR G+ AV +GQ EAA ALGL Sbjct: 250 PIAGRFNLSGGSVVAPEFMSLFLALSFYTASFIAEIVRGGIKAVAKGQTEAADALGLRSS 309 Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368 TRL+++PQAMR IIPPLTSQ+LNL KNSSLAVAVGFAD+VSVGGTI+NQTGQA+E++ Sbjct: 310 TTTRLIVVPQAMRIIIPPLTSQFLNLTKNSSLAVAVGFADIVSVGGTILNQTGQAVEVVA 369 Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKEK 397 IW+ IYLSLS++ AL MN NAK+AL E+ Sbjct: 370 IWLVIYLSLSLLTALVMNWFNAKMALVER 398 >gi|116251959|ref|YP_767797.1| general L-amino acid transport system permease [Rhizobium leguminosarum bv. viciae 3841] gi|3182888|sp|Q52813|AAPQ_RHIL3 RecName: Full=General L-amino acid transport system permease protein AapQ gi|1154895|emb|CAA57934.1| general amino acid ABC type transporter [Rhizobium leguminosarum] gi|115256607|emb|CAK07695.1| General L-amino acid transport system permease [Rhizobium leguminosarum bv. viciae 3841] Length = 400 Score = 395 bits (1015), Expect = e-108, Method: Compositional matrix adjust. Identities = 209/379 (55%), Positives = 267/379 (70%) Query: 19 LYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVP 78 +YD + +I QI+ ++L W +N N+ +SN + G GFL RAGFEI Q ++ Sbjct: 22 MYDPKYRSIFYQILTIVILVGFVWWVAHNTAVNLARSNTASGFGFLRGRAGFEIGQSLIT 81 Query: 79 YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138 ++SDS+YA A+LVG +NT +A +G+ ATIIG L+G GRLS N L+A +C VYVEVFRN Sbjct: 82 FSSDSTYARALLVGILNTLLVAVTGIFTATIIGFLIGIGRLSRNWLIAKLCTVYVEVFRN 141 Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198 IPPL+VIFF Y VLSVLP P S+ LPF M+LNNRGL+FP DT + V+ I Sbjct: 142 IPPLLVIFFWYLGVLSVLPQPRESVGLPFSMYLNNRGLAFPKPIFDTGMIAVGIALVIAI 201 Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258 V S+ R + TG+ ++ + LI GLP LV + + L FD PV G+FN G Sbjct: 202 VASIIIARWAHKRQAATGQPFHTVWTAIALIVGLPLLVFVVSGFPLTFDVPVAGKFNLTG 261 Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 GS V PEFMSL++ALS YTA+FIAEIVR G+ VP+GQ EAA ALGL TRLV++PQ Sbjct: 262 GSVVGPEFMSLFLALSFYTASFIAEIVRGGIRGVPKGQSEAAGALGLHPSSVTRLVVVPQ 321 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378 A+R IIPPLTSQYLNL KNSSLA+A+GF+DLV+VGGTI+NQ+GQAIEI+ IW +YLSLS Sbjct: 322 ALRIIIPPLTSQYLNLTKNSSLAIAIGFSDLVAVGGTILNQSGQAIEIVCIWGIVYLSLS 381 Query: 379 IMIALFMNRLNAKIALKEK 397 I+ +LFMN NAK+AL E+ Sbjct: 382 ILTSLFMNWFNAKMALVER 400 >gi|241204487|ref|YP_002975583.1| polar amino acid ABC transcriptional regulator inner membrane protein [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240858377|gb|ACS56044.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 400 Score = 389 bits (1000), Expect = e-106, Method: Compositional matrix adjust. Identities = 203/379 (53%), Positives = 266/379 (70%) Query: 19 LYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVP 78 +YD + +I Q++ ++L W +N N+ +SN + G GFL RAGFEI Q ++ Sbjct: 22 MYDPKYRSIFFQVLTIVILVGFVWWVAHNTAVNLARSNTASGFGFLRGRAGFEIGQSLIG 81 Query: 79 YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138 ++SDS+YA A++VG +NT +A +G+ ATIIG L+G GRLS N L+A +C VYVEVFRN Sbjct: 82 FSSDSTYARALVVGILNTLLVAVTGIFTATIIGFLIGIGRLSRNWLIAKLCTVYVEVFRN 141 Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198 IPPL+VIFF Y VLSVLP P S+ LPF M+LNNRGL+FP +T + ++ I Sbjct: 142 IPPLLVIFFWYLGVLSVLPQPRESVALPFSMYLNNRGLAFPKPIFETGMIAVGIALLIAI 201 Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258 V ++ R + TG+ ++ + LI GLP LV + + L FD PV G+FN G Sbjct: 202 VATIIIARWAHKRQAATGQPFHTVWTAIALIVGLPLLVFVVSGFPLTFDVPVAGKFNLTG 261 Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 GS V PEFMSL++ALS YTA+FIAEIVR G+ V +GQ EAA ALGL TRLV++PQ Sbjct: 262 GSVVGPEFMSLFLALSFYTASFIAEIVRGGIRGVAKGQSEAAGALGLHPSSVTRLVVVPQ 321 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378 A+R IIPPLTSQYLNL KNSSLA+A+GF+DLV+VGGTI+NQ+GQAIEI+ IW +YLSLS Sbjct: 322 ALRIIIPPLTSQYLNLTKNSSLAIAIGFSDLVAVGGTILNQSGQAIEIVCIWGIVYLSLS 381 Query: 379 IMIALFMNRLNAKIALKEK 397 I+ +LFMN NAK+AL E+ Sbjct: 382 ILTSLFMNWFNAKMALVER 400 >gi|227821879|ref|YP_002825849.1| putative amino-acid ABC transporter membrane protein [Sinorhizobium fredii NGR234] gi|227340878|gb|ACP25096.1| putative amino-acid ABC transporter membrane protein [Sinorhizobium fredii NGR234] Length = 397 Score = 389 bits (1000), Expect = e-106, Method: Compositional matrix adjust. Identities = 200/387 (51%), Positives = 275/387 (71%) Query: 11 RYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGF 70 R S + D +V I Q + ++L V+ W V N N++++N++ G GFL+ RAGF Sbjct: 11 RSKSSGSIINDPQVRGIFYQAVTIIILAVLVYWIVQNTVENLQRANIASGYGFLNSRAGF 70 Query: 71 EIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICR 130 ++ Q ++ +TSDSSY A++VGFVNT +A +G+I ATIIG +VG GRLS N ++A + Sbjct: 71 DVGQSLIAFTSDSSYGRALVVGFVNTLLVAVTGIITATIIGFIVGIGRLSHNWIIAKLSL 130 Query: 131 VYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIF 190 YVEVFRNIPPL+VIFF Y VL++LP ++ LP ++++NRG++FP ++ Sbjct: 131 AYVEVFRNIPPLLVIFFWYSGVLAILPQAREALALPLDIYVSNRGVAFPRAIFGEGSQYT 190 Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 +F+ ++ V S+ R +R E TG+ LP+L+I L+ GLP + +A L FD P+ Sbjct: 191 LFALIIAAVASVVFARYARQRQEATGQRLPVLWIVLGLLIGLPLITFLATGAPLTFDIPI 250 Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 G+FN GGS V PEF+SL++ALS YTAAFIAEIVR+G+ V +GQ EAA ALG+ R Sbjct: 251 AGKFNLTGGSVVGPEFISLFLALSFYTAAFIAEIVRAGIRGVSKGQTEAAHALGIRPRLT 310 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370 TRLV++PQAMR IIPPLTSQYLNL KNSSLAVAVG+ADLV+VGGTI+NQTGQAIE++ IW Sbjct: 311 TRLVVVPQAMRIIIPPLTSQYLNLTKNSSLAVAVGYADLVAVGGTILNQTGQAIEVVSIW 370 Query: 371 MFIYLSLSIMIALFMNRLNAKIALKEK 397 + +YLSLS+ +LFMN NA++AL E+ Sbjct: 371 IIVYLSLSLATSLFMNWYNARMALVER 397 >gi|239831566|ref|ZP_04679895.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium LMG 3301] gi|239823833|gb|EEQ95401.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium LMG 3301] Length = 408 Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust. Identities = 192/381 (50%), Positives = 263/381 (69%) Query: 17 KFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGI 76 LYD RV I Q+I+ ++ W V N N++++N++ G GFLS RAGF+I Q + Sbjct: 28 SLLYDPRVRGIFYQVIVFGVVIGAIYWIVGNTVTNLQRANIASGFGFLSGRAGFDISQTL 87 Query: 77 VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136 + Y+SDS+Y A LVG +NT ++A G++ A+IIG LVG GRLS N L+ IC VYVEVF Sbjct: 88 IQYSSDSNYGRAFLVGLMNTLYVAALGVVTASIIGFLVGIGRLSRNWLIRKICTVYVEVF 147 Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196 RNIPPL+VIFF Y VLSVLP SI LP G ++NNRG P A + + ++ Sbjct: 148 RNIPPLLVIFFWYFGVLSVLPQARDSIALPLGTYMNNRGFFMPAPVWGEGAWLLPVALLI 207 Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256 GIV S+ R ++ TG+ + ++ LI GLP L LIA + + FD P LG FN Sbjct: 208 GIVASIVIARWAKRRQMATGQPFHTIRVAAALIIGLPVLALIATGFPISFDLPKLGTFNL 267 Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316 GG+ V PEF++L++ALS YTA+FIAE VR+G++ V +GQ EAA A+GL + RL+++ Sbjct: 268 TGGAQVKPEFLALFLALSFYTASFIAETVRAGVLGVNKGQTEAAYAVGLRPGQTMRLIIV 327 Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376 PQA+R IIPPL+SQYLNL+KNSSLA+A+G+ DLV+VGGTI+NQTGQ++E++ IWM IYL Sbjct: 328 PQALRIIIPPLSSQYLNLIKNSSLAIAIGYPDLVAVGGTILNQTGQSVEVVAIWMVIYLG 387 Query: 377 LSIMIALFMNRLNAKIALKEK 397 +S++ + MN NAK+AL E+ Sbjct: 388 ISLITSGLMNWFNAKMALVER 408 >gi|86357518|ref|YP_469410.1| general L-amino acid ABC transporter, permease protein [Rhizobium etli CFN 42] gi|86281620|gb|ABC90683.1| general L-amino acid ABC transporter, permease protein [Rhizobium etli CFN 42] Length = 406 Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust. Identities = 202/385 (52%), Positives = 265/385 (68%) Query: 13 FSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEI 72 +S LYD V I Q++ +LL V W +N N+ ++N++ G GFL+ RAGFE+ Sbjct: 22 WSFQSALYDPTVRGIFFQVLTIVLLVVFVWWVAHNTAVNLARANIASGFGFLNGRAGFEV 81 Query: 73 DQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVY 132 Q ++ Y+SDS+Y A++VG +NT +A +G+I ATIIG +VG GRLS N L+A +C VY Sbjct: 82 GQSLIAYSSDSTYGRALVVGLLNTILIAVTGIITATIIGFIVGIGRLSRNWLIAKLCTVY 141 Query: 133 VEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVF 192 VEVFRNIPPL+VIFF Y VL+VLP S+ LP G +LNNRGLSFP + Sbjct: 142 VEVFRNIPPLLVIFFWYSGVLAVLPNARESLHLPLGTYLNNRGLSFPKPIFGETFWLVGV 201 Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252 +FV+ I+ + R + TG+ ++ S L+ GLP + + L FD P+ G Sbjct: 202 AFVVAIIAVIATARWAHRRQAATGQPFHTIWASIGLLVGLPLITFLLAGAPLSFDYPIAG 261 Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312 +FN GGS V PEFMSL++ALS YTAAFIAEIVR+G+ VP+GQ EAA ALGL TR Sbjct: 262 KFNLTGGSVVGPEFMSLFLALSFYTAAFIAEIVRAGIRGVPKGQTEAAGALGLHPSSITR 321 Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372 LV++PQA+R IIPPL+SQYLNL KNSSLA+A+GFADLV+VG T +NQTGQA+E+ILIWM Sbjct: 322 LVVIPQALRIIIPPLSSQYLNLTKNSSLAIAIGFADLVAVGSTTLNQTGQAVEVILIWMV 381 Query: 373 IYLSLSIMIALFMNRLNAKIALKEK 397 IYL LS++ +L MN NAK+AL E+ Sbjct: 382 IYLGLSVVTSLLMNWFNAKMALVER 406 >gi|153009883|ref|YP_001371098.1| polar amino acid ABC transporter inner membrane subunit [Ochrobactrum anthropi ATCC 49188] gi|151561771|gb|ABS15269.1| polar amino acid ABC transporter, inner membrane subunit [Ochrobactrum anthropi ATCC 49188] Length = 397 Score = 379 bits (973), Expect = e-103, Method: Compositional matrix adjust. Identities = 190/381 (49%), Positives = 262/381 (68%) Query: 17 KFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGI 76 LYD R+ I Q+I+ + W V N N++++N++ G FL+ RAGF+I Q + Sbjct: 17 SLLYDPRIRGIFYQVIVFGAVIGAIYWIVGNTITNLQRANIASGFAFLNGRAGFDISQTL 76 Query: 77 VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136 + Y SDS+Y A LVG VNT ++A G+I A+IIG LVG GRLS N L+ IC VYVE+F Sbjct: 77 IQYNSDSNYGRAFLVGLVNTLYVAALGVITASIIGFLVGIGRLSRNWLIRKICTVYVEIF 136 Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196 RNIPPL+VIFF Y VLSVLP S LP G +LNNRG P+ A + + ++ Sbjct: 137 RNIPPLLVIFFWYFGVLSVLPQARDSFSLPLGTYLNNRGFFMPSPIWGEGAWLLPVALLI 196 Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256 GIV S+ R ++ TG++ + +S LI GLP L LIA + + FD P LG FN Sbjct: 197 GIVASIIVARWAKRRQMATGQSFHTIRVSAALIIGLPILALIATGFPVSFDSPKLGTFNL 256 Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316 GG+ + PEF++L++ALS YTA+FIAE VR+G++ V +GQ EAA A+GL + RL+++ Sbjct: 257 TGGAQIKPEFLALFLALSFYTASFIAETVRAGVLGVNKGQTEAAYAVGLRPGQTMRLIIV 316 Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376 PQA+R IIPPL+SQYLNL+KNSSLA+A+G+ DLV+VGGTI+NQTGQ++E++ IWM IYL Sbjct: 317 PQALRIIIPPLSSQYLNLIKNSSLAIAIGYPDLVAVGGTILNQTGQSVEVVAIWMVIYLG 376 Query: 377 LSIMIALFMNRLNAKIALKEK 397 +S++++ MN NAK+AL E+ Sbjct: 377 ISLIVSGLMNWFNAKMALVER 397 >gi|13476742|ref|NP_108311.1| amino acid ABC transporter, permease protein [Mesorhizobium loti MAFF303099] gi|14027503|dbj|BAB53772.1| amino acid ABC transporter, permease protein [Mesorhizobium loti MAFF303099] Length = 395 Score = 378 bits (971), Expect = e-103, Method: Compositional matrix adjust. Identities = 197/394 (50%), Positives = 263/394 (66%), Gaps = 1/394 (0%) Query: 5 ARKTVTRYFS-RMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGF 63 A + V R S R F+ D ++ ++ Q ++ ++L W V NV +N+++ +++ G GF Sbjct: 2 ASQEVLREESGRASFINDPKIRSLFFQTLVVIVLFGSVWWIVQNVIDNLQRLHIASGFGF 61 Query: 64 LSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK 123 L RAGF+I + YTSDS+Y AI+VG +NT +A +G+I ATIIG ++G GRLS N Sbjct: 62 LRGRAGFDISDTPIAYTSDSTYGRAIVVGLINTVIVAVAGIITATIIGFVIGIGRLSQNW 121 Query: 124 LVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTM 183 L+ IC VYVEVFRNIPPL+VIFF Y VL+VLP P S LPFG FLN RG FP Sbjct: 122 LIQKICTVYVEVFRNIPPLLVIFFWYSGVLAVLPAPRDSYHLPFGSFLNQRGFYFPRPVW 181 Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243 + + V + ++GI ++ F R +R TG+ P+L+ S LI GLP L + + Sbjct: 182 GEGSWLIVVALLVGIAMAWFVARTARQRQMATGQQFPVLWTSVALIVGLPLLAYVLSGFP 241 Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 L FD P FN GG V PEF+SLY+ALSCYTAAFIAEIVR+G+ V +GQ EAA AL Sbjct: 242 LSFDLPKQSTFNLTGGFQVKPEFLSLYLALSCYTAAFIAEIVRAGIRGVSKGQTEAAAAL 301 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363 GL RLV++PQAMR +IPPLTSQYLNL KNSSLA+A+G+ DL + GT++NQTGQA Sbjct: 302 GLRSGSILRLVVVPQAMRIVIPPLTSQYLNLTKNSSLAIAIGYPDLTATAGTVLNQTGQA 361 Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 +E +LI M YL LS++ + MN +NA++AL E+ Sbjct: 362 VEGVLIMMIAYLILSLVTSAVMNVVNARMALVER 395 >gi|260463340|ref|ZP_05811541.1| polar amino acid ABC transporter, inner membrane subunit [Mesorhizobium opportunistum WSM2075] gi|259030930|gb|EEW32205.1| polar amino acid ABC transporter, inner membrane subunit [Mesorhizobium opportunistum WSM2075] Length = 395 Score = 378 bits (970), Expect = e-103, Method: Compositional matrix adjust. Identities = 194/384 (50%), Positives = 259/384 (67%) Query: 14 SRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEID 73 SR F+ D +V ++ Q ++ ++L W V NV +N+++ +++ G GFL RAGF+I Sbjct: 12 SRASFVNDPKVRSLFFQTLVVIVLFGSVWWIVQNVIDNLQRLHIASGFGFLRGRAGFDIS 71 Query: 74 QGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYV 133 + YTSDS+Y AI+VG +NT +A +G+I ATIIG ++G GRLS N L+ IC VYV Sbjct: 72 DTPIAYTSDSTYGRAIVVGLINTIIVAVAGIITATIIGFVIGIGRLSQNWLIQKICTVYV 131 Query: 134 EVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFS 193 E+FRNIPPL+VIFF Y VL+VLP P S LPFG FLN RG FP + + + + Sbjct: 132 EIFRNIPPLLVIFFWYSGVLAVLPPPRDSYNLPFGSFLNQRGFYFPRPVWGDGSWLILVA 191 Query: 194 FVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ 253 V+GI ++ F R +R TG+ P+L+ S LI GLP L + + L FD P Sbjct: 192 LVVGIAMAWFVARKARQRQMATGQQFPVLWTSVALIVGLPLLAYVLSGFPLSFDLPKQST 251 Query: 254 FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313 FN GG V PEF+SLY+ALSCYTAAFIAEIVR+G+ V +GQ EAA ALGL RL Sbjct: 252 FNLTGGFQVKPEFLSLYLALSCYTAAFIAEIVRAGIRGVSKGQTEAAAALGLRSGSILRL 311 Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI 373 V++PQAMR +IPPLTSQYLNL KNSSLA+A+G+ DL + GT++NQTGQA+E +LI M Sbjct: 312 VVVPQAMRIVIPPLTSQYLNLTKNSSLAIAIGYPDLTATAGTVLNQTGQAVEGVLIMMIA 371 Query: 374 YLSLSIMIALFMNRLNAKIALKEK 397 YL LS++ + MN +NA++AL E+ Sbjct: 372 YLILSLVTSAVMNVVNARMALVER 395 >gi|209549161|ref|YP_002281078.1| polar amino acid ABC transporter inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209534917|gb|ACI54852.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 400 Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust. Identities = 206/379 (54%), Positives = 266/379 (70%) Query: 19 LYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVP 78 +YD + +I QI+ ++L W +N N+ +SN + G GFL RAGFEI Q ++ Sbjct: 22 MYDPKYRSIFFQILTIVVLVAFVWWVAHNTAVNLARSNTASGFGFLRGRAGFEIGQSLIG 81 Query: 79 YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138 Y+SDS+YA A+ VG +NT +A +G++ ATIIG ++G GRLS N L+A + VYVE+FRN Sbjct: 82 YSSDSTYARALFVGILNTLLVAVTGIVTATIIGFIIGIGRLSRNWLIAKLSTVYVEIFRN 141 Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198 IPPL+VIFF Y VLSVLP P S+ LPF MFLNNRGL+FP +T + ++ I Sbjct: 142 IPPLLVIFFWYLGVLSVLPQPRESVGLPFSMFLNNRGLAFPKPIFETGMVAVGIALLIAI 201 Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258 V ++ R + TG+ ++ S LI GLP LV +A + L FD PV G+FN G Sbjct: 202 VAAIIMARWAHKRQAATGQPFHTVWASIALIVGLPLLVFVASGFPLTFDVPVAGKFNLTG 261 Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 GS V PEFMSL++ALS YTA+FIAEIVR G+ VP+GQ EAA ALGL TRLV++PQ Sbjct: 262 GSVVGPEFMSLFLALSFYTASFIAEIVRGGIRGVPKGQSEAAGALGLHPSNVTRLVVVPQ 321 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378 A+R IIPPLTSQYLNL KNSSLA+A+GF+DLV+VGGTI+NQ+GQAIEI+ IW YLSLS Sbjct: 322 ALRIIIPPLTSQYLNLTKNSSLAIAIGFSDLVAVGGTILNQSGQAIEIVCIWGIAYLSLS 381 Query: 379 IMIALFMNRLNAKIALKEK 397 I+ +LFMN NAK+AL E+ Sbjct: 382 ILTSLFMNWFNAKMALVER 400 >gi|190410095|ref|YP_001965619.1| probable general L-amino acid transport permease ABC transporter protein [Sinorhizobium meliloti] gi|125631125|gb|ABN47126.1| probable general L-amino acid transport permease ABC transporter protein [Sinorhizobium meliloti SM11] Length = 391 Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust. Identities = 202/387 (52%), Positives = 272/387 (70%) Query: 11 RYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGF 70 R S + D +V I Q I ++L + W V+N +N+ ++N++ G FL RAGF Sbjct: 5 RSKSSGSIINDPQVRGIFYQAITIIILAALIYWIVDNTVDNLRRANIASGYDFLRSRAGF 64 Query: 71 EIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICR 130 ++ Q ++ +TSDS+Y A+LVGF+NT +A +G+I ATIIG LVG GRLS N ++A + Sbjct: 65 DVGQSLISFTSDSTYGRALLVGFINTLLVAITGIITATIIGFLVGIGRLSHNWIIAKLSL 124 Query: 131 VYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIF 190 YVEVFRNIPPL+VIFF Y VLS+LP ++ LPF +FL+NRG++FP A+ Sbjct: 125 AYVEVFRNIPPLLVIFFWYSGVLSILPQARDALALPFDIFLSNRGVAFPRPVAGEGAEYT 184 Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 + +F++ I S+F TR +R TG+ LP+L+ LI GLP + + + FD PV Sbjct: 185 LLAFIIAIAASVFCTRYARQRQLATGERLPVLWTVLGLIIGLPLITFLVTGAPIGFDVPV 244 Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 G+FN GGS V PEFMSL++ALS YTAAFIAEIVR+G+ V +GQ EAA ALG+ Sbjct: 245 AGKFNLTGGSVVGPEFMSLFLALSFYTAAFIAEIVRAGIRGVSKGQTEAAHALGIRPSLT 304 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370 TRLV++PQAMR IIPPLTSQYLNL KNSSLAVA+G+ADLV+VGGTI+NQTGQ+IE++ IW Sbjct: 305 TRLVVVPQAMRIIIPPLTSQYLNLTKNSSLAVAIGYADLVAVGGTILNQTGQSIEVVSIW 364 Query: 371 MFIYLSLSIMIALFMNRLNAKIALKEK 397 + +YLSLS+ +LFMN NA++AL E+ Sbjct: 365 LIVYLSLSLATSLFMNWYNARMALVER 391 >gi|319784339|ref|YP_004143815.1| polar amino acid ABC transporter inner membrane subunit [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317170227|gb|ADV13765.1| polar amino acid ABC transporter, inner membrane subunit [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 395 Score = 373 bits (958), Expect = e-101, Method: Compositional matrix adjust. Identities = 195/384 (50%), Positives = 256/384 (66%) Query: 14 SRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEID 73 SR F+ D ++ I Q+++ +LL W +NV +N+ + ++ G GFL RAGF+I Sbjct: 12 SRGSFINDPKIRGIFFQVLVVVLLVAGVWWIAHNVIDNLTRLRIASGFGFLKGRAGFDIS 71 Query: 74 QGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYV 133 + + Y+SDS+Y AILVG +NT +A G+I ATIIG ++G GRLS N L+ IC VYV Sbjct: 72 ESAIAYSSDSTYGRAILVGLLNTVIVAIVGIITATIIGFVIGIGRLSKNWLIRKICTVYV 131 Query: 134 EVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFS 193 EVFRNIPPL+VIFF Y VL+VLP P SI LPFG FLN RG FP + + + Sbjct: 132 EVFRNIPPLLVIFFWYSGVLAVLPAPRDSINLPFGSFLNQRGFYFPRAVWGDGSWLIFVA 191 Query: 194 FVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ 253 ++GI ++ F R +R TG+ P+ + S LI GLP L + L FD P Sbjct: 192 LLVGIAMAWFVARKARQRQMATGQQFPVFWTSAALIVGLPLLAYALSGFPLSFDYPKQST 251 Query: 254 FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313 FN GG V PEF+SLY+ALSCYTAAFIAEIVR+G+ V GQ EAA ALGL RL Sbjct: 252 FNLTGGFQVRPEFLSLYLALSCYTAAFIAEIVRAGIRGVSAGQTEAAGALGLRSGSILRL 311 Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI 373 V++PQAMR +IPPLTSQYLNL KNSSLA+A+G+ DL + GT++NQTGQA+E ++I M I Sbjct: 312 VVVPQAMRIVIPPLTSQYLNLTKNSSLAIAIGYPDLTATAGTVLNQTGQAVEGVVIMMVI 371 Query: 374 YLSLSIMIALFMNRLNAKIALKEK 397 YL++S++ +L MN NAK+AL E+ Sbjct: 372 YLAISLLTSLVMNWFNAKMALVER 395 >gi|265999519|ref|ZP_05466765.2| polar amino acid ABC transporter [Brucella melitensis bv. 2 str. 63/9] gi|263094478|gb|EEZ18300.1| polar amino acid ABC transporter [Brucella melitensis bv. 2 str. 63/9] Length = 454 Score = 373 bits (958), Expect = e-101, Method: Compositional matrix adjust. Identities = 191/403 (47%), Positives = 265/403 (65%), Gaps = 8/403 (1%) Query: 3 KNARKTVTRYFSRMK--------FLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEK 54 + RK + YF + LYD+R I Q+++ + W V N N+++ Sbjct: 52 ERHRKHMASYFGTERRQGSGGTSLLYDLRARGIFYQVVVFGAVIAGIYWIVGNTITNLQR 111 Query: 55 SNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLV 114 +N++ G GFL RAGF+I Q ++ Y SDS+Y A LVG VNT ++A G++ A+IIG LV Sbjct: 112 ANIASGFGFLYGRAGFDISQTLIQYNSDSTYGRAFLVGLVNTLYVAALGVVTASIIGFLV 171 Query: 115 GAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNR 174 G GRLS N L+ IC VYVEVFRNIPPL+VIFF Y VLSVLP S +P ++NNR Sbjct: 172 GIGRLSHNWLIRNICTVYVEVFRNIPPLLVIFFWYFGVLSVLPPVRQSYSMPLSTYINNR 231 Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234 G P+ A + ++GI+ S R ++ TG+ + +S LI GLP Sbjct: 232 GFFMPSPVWGEGAWAVPVALLIGILASFAVARWAKRRQMATGQPFHTIRVSAALIIGLPI 291 Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294 L LIA + + FD P LG FN GG+ + PEF++L++ALS YTA+FIAE VR+G++ V + Sbjct: 292 LALIATGFPVSFDVPKLGTFNLTGGAQIKPEFLALFLALSFYTASFIAETVRAGVLGVSK 351 Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354 GQ EAA A+GL + RL+++PQA+R IIPPL+SQYLNL+KNSSLA+A+G+ DLV+VGG Sbjct: 352 GQTEAAYAVGLRSGQTMRLIIVPQALRIIIPPLSSQYLNLIKNSSLAIAIGYPDLVAVGG 411 Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 TI+NQTGQA+E++ IWM IYL +S++++ MN NAK+AL E+ Sbjct: 412 TILNQTGQAVEVVAIWMVIYLGISLIVSGLMNWFNAKMALVER 454 >gi|150378346|ref|YP_001314940.1| polar amino acid ABC transporter, inner membrane subunit [Sinorhizobium medicae WSM419] gi|150396326|ref|YP_001326793.1| polar amino acid ABC transporter inner membrane subunit [Sinorhizobium medicae WSM419] gi|150027841|gb|ABR59958.1| polar amino acid ABC transporter, inner membrane subunit [Sinorhizobium medicae WSM419] gi|150032893|gb|ABR65007.1| polar amino acid ABC transporter, inner membrane subunit [Sinorhizobium medicae WSM419] Length = 397 Score = 372 bits (956), Expect = e-101, Method: Compositional matrix adjust. Identities = 202/387 (52%), Positives = 272/387 (70%) Query: 11 RYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGF 70 R S + D +V I Q I ++L + W V+N +N+ ++N++ G FL RAGF Sbjct: 11 RSKSSGSIINDPQVRGIFYQAITIIILAALIYWIVDNTVDNLRRANIASGYDFLRSRAGF 70 Query: 71 EIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICR 130 ++ Q ++ +TSDS+Y A+LVGF+NT +A +G+I ATIIG LVG GRLS N ++A + Sbjct: 71 DVGQSLISFTSDSTYGRALLVGFINTLLVAITGIITATIIGFLVGIGRLSHNWIIAKLSL 130 Query: 131 VYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIF 190 YVEVFRNIPPL+VIFF Y VLS+LP ++ LPF +FL+NRG++FP A+ Sbjct: 131 AYVEVFRNIPPLLVIFFWYSGVLSILPQARDALALPFDIFLSNRGVAFPRPVAGEGAEYT 190 Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 + +F++ I S+F TR +R TG+ LP+L+ LI GLP + + + FD PV Sbjct: 191 LLAFIIAIAASVFFTRYARQRQLATGERLPVLWTVLGLIIGLPLITFLVTGAPIGFDVPV 250 Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 G+FN GGS V PEFMSL++ALS YTAAFIAEIVR+G+ V +GQ EAA ALG+ Sbjct: 251 AGKFNLTGGSVVGPEFMSLFLALSFYTAAFIAEIVRAGIRGVSKGQTEAAHALGIRPSLT 310 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370 TRLV++PQAMR IIPPLTSQYLNL KNSSLAVA+G+ADLV+VGGTI+NQTGQ+IE++ IW Sbjct: 311 TRLVVVPQAMRIIIPPLTSQYLNLTKNSSLAVAIGYADLVAVGGTILNQTGQSIEVVSIW 370 Query: 371 MFIYLSLSIMIALFMNRLNAKIALKEK 397 + +YLSLS+ +LFMN NA++AL E+ Sbjct: 371 LIVYLSLSLATSLFMNWYNARMALVER 397 >gi|225852261|ref|YP_002732494.1| His/Glu/Gln/Arg/opine family amino acid ABC transporter permease [Brucella melitensis ATCC 23457] gi|225640626|gb|ACO00540.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family protein [Brucella melitensis ATCC 23457] Length = 397 Score = 372 bits (956), Expect = e-101, Method: Compositional matrix adjust. Identities = 187/381 (49%), Positives = 258/381 (67%) Query: 17 KFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGI 76 LYD+R I Q+++ + W V N N++++N++ G GFL RAGF+I Q + Sbjct: 17 SLLYDLRARGIFYQVVVFGAVIAGIYWIVGNTITNLQRANIASGFGFLYGRAGFDISQTL 76 Query: 77 VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136 + Y SDS+Y A LVG VNT ++A G++ A+IIG LVG GRLS N L+ IC VYVEVF Sbjct: 77 IQYNSDSTYGRAFLVGLVNTLYVAALGVVTASIIGFLVGIGRLSHNWLIRNICTVYVEVF 136 Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196 RNIPPL+VIFF Y VLSVLP S +P ++NNRG P+ A + ++ Sbjct: 137 RNIPPLLVIFFWYFGVLSVLPPVRQSYSMPLSTYINNRGFFMPSPVWGEGAWAVPVALLI 196 Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256 GI+ S R ++ TG+ + +S LI GLP L LIA + + FD P LG FN Sbjct: 197 GILASFAVARWAKRRQMATGQPFHTIRVSAALIIGLPILALIATGFPVSFDVPKLGTFNL 256 Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316 GG+ + PEF++L++ALS YTA+FIAE VR+G++ V +GQ EAA A+GL + RL+++ Sbjct: 257 TGGAQIKPEFLALFLALSFYTASFIAETVRAGVLGVSKGQTEAAYAVGLRSGQTMRLIIV 316 Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376 PQA+R IIPPL+SQYLNL+KNSSLA+A+G+ DLV+VGGTI+NQTGQA+E++ IWM IYL Sbjct: 317 PQALRIIIPPLSSQYLNLIKNSSLAIAIGYPDLVAVGGTILNQTGQAVEVVAIWMVIYLG 376 Query: 377 LSIMIALFMNRLNAKIALKEK 397 +S++++ MN NAK+AL E+ Sbjct: 377 ISLIVSGLMNWFNAKMALVER 397 >gi|148560133|ref|YP_001258724.1| amino acid ABC transporter permease [Brucella ovis ATCC 25840] gi|148371390|gb|ABQ61369.1| amino acid ABC transporter, permease protein [Brucella ovis ATCC 25840] Length = 454 Score = 372 bits (954), Expect = e-101, Method: Compositional matrix adjust. Identities = 191/403 (47%), Positives = 264/403 (65%), Gaps = 8/403 (1%) Query: 3 KNARKTVTRYFSRMK--------FLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEK 54 + RK + YF + LYD R I Q+++ + W V N N+++ Sbjct: 52 ERHRKHMASYFGTERRQGSGGTSLLYDPRARGIFYQVVVFGAVIAGIYWIVGNTITNLQR 111 Query: 55 SNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLV 114 +N++ G GFL RAGF+I Q ++ Y SDS+Y A LVG VNT ++A G++ A+IIG LV Sbjct: 112 ANIASGFGFLYGRAGFDISQTLIQYNSDSTYGRAFLVGLVNTLYVAALGVVTASIIGFLV 171 Query: 115 GAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNR 174 G GRLS N L+ IC VYVEVFRNIPPL+VIFF Y VLSVLP S +P ++NNR Sbjct: 172 GIGRLSHNWLIRNICTVYVEVFRNIPPLLVIFFWYFGVLSVLPPVRQSYSMPLSTYINNR 231 Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234 G P+ A + ++GI+ S R ++ TG+ + +S LI GLP Sbjct: 232 GFFMPSPVWGEGAWALPVALLIGILASFAVARWAKRRQMATGQPFHTIRVSAALIIGLPI 291 Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294 L LIA + + FD P LG FN GG+ + PEF++L++ALS YTA+FIAE VR+G++ V + Sbjct: 292 LALIATGFPVSFDVPKLGTFNLTGGAQIKPEFLALFLALSFYTASFIAETVRAGVLGVSK 351 Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354 GQ EAA A+GL + RL+++PQA+R IIPPL+SQYLNL+KNSSLA+A+G+ DLV+VGG Sbjct: 352 GQTEAAYAVGLRSGQTMRLIIVPQALRIIIPPLSSQYLNLIKNSSLAIAIGYPDLVAVGG 411 Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 TI+NQTGQA+E++ IWM IYL +S++++ MN NAK+AL E+ Sbjct: 412 TILNQTGQAVEVVAIWMVIYLGISLIVSGLMNWFNAKMALVER 454 >gi|260563784|ref|ZP_05834270.1| polar amino acid ABC transporter [Brucella melitensis bv. 1 str. 16M] gi|260153800|gb|EEW88892.1| polar amino acid ABC transporter [Brucella melitensis bv. 1 str. 16M] Length = 454 Score = 372 bits (954), Expect = e-101, Method: Compositional matrix adjust. Identities = 191/403 (47%), Positives = 264/403 (65%), Gaps = 8/403 (1%) Query: 3 KNARKTVTRYFSRMK--------FLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEK 54 + RK + YF + LYD R I Q+++ + W V N N+++ Sbjct: 52 ERHRKHMASYFGTERRQGSGGTSLLYDPRARGIFYQVVVFGAVIAGIYWIVGNTITNLQR 111 Query: 55 SNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLV 114 +N++ G GFL RAGF+I Q ++ Y SDS+Y A LVG VNT ++A G++ A+IIG LV Sbjct: 112 ANIASGFGFLYGRAGFDISQTLIQYNSDSTYGRAFLVGLVNTLYVAALGVVTASIIGFLV 171 Query: 115 GAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNR 174 G GRLS N L+ IC VYVEVFRNIPPL+VIFF Y VLSVLP S +P ++NNR Sbjct: 172 GIGRLSHNWLIRNICTVYVEVFRNIPPLLVIFFWYFGVLSVLPPVRQSYSMPLSTYINNR 231 Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234 G P+ A + ++GI+ S R ++ TG+ + +S LI GLP Sbjct: 232 GFFMPSPVWGEGAWAVPVALLIGILASFAVARWAKRRQMATGQPFHTIRVSAALIIGLPI 291 Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294 L LIA + + FD P LG FN GG+ + PEF++L++ALS YTA+FIAE VR+G++ V + Sbjct: 292 LALIATGFPVSFDVPKLGTFNLTGGAQIKPEFLALFLALSFYTASFIAETVRAGVLGVSK 351 Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354 GQ EAA A+GL + RL+++PQA+R IIPPL+SQYLNL+KNSSLA+A+G+ DLV+VGG Sbjct: 352 GQTEAAYAVGLRSGQTMRLIIVPQALRIIIPPLSSQYLNLIKNSSLAIAIGYPDLVAVGG 411 Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 TI+NQTGQA+E++ IWM IYL +S++++ MN NAK+AL E+ Sbjct: 412 TILNQTGQAVEVVAIWMVIYLGISLIVSGLMNWFNAKMALVER 454 >gi|225627244|ref|ZP_03785281.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family protein [Brucella ceti str. Cudo] gi|225617249|gb|EEH14294.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family protein [Brucella ceti str. Cudo] Length = 454 Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust. Identities = 190/403 (47%), Positives = 264/403 (65%), Gaps = 8/403 (1%) Query: 3 KNARKTVTRYFSRMK--------FLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEK 54 + RK + YF + LYD R I Q+++ + W V N N+++ Sbjct: 52 ERHRKHMASYFGTERRQGSGGTSLLYDPRARGIFYQVVVFGAVIAGIYWIVGNTITNLQR 111 Query: 55 SNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLV 114 +N++ G GF+ RAGF+I Q ++ Y SDS+Y A LVG VNT ++A G++ A+IIG LV Sbjct: 112 ANIASGFGFIYGRAGFDISQTLIQYNSDSTYGRAFLVGLVNTLYVAALGVVTASIIGFLV 171 Query: 115 GAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNR 174 G GRLS N L+ IC VYVEVFRNIPPL+VIFF Y VLSVLP S +P ++NNR Sbjct: 172 GIGRLSHNWLIRNICTVYVEVFRNIPPLLVIFFWYFGVLSVLPPVRQSYSMPLSTYINNR 231 Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234 G P+ A + ++GI+ S R ++ TG+ + +S LI GLP Sbjct: 232 GFFMPSPVWGEGAWALPVALLIGILASFAVARWAKRRQMATGQPFHTIRVSAALIIGLPI 291 Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294 L LIA + + FD P LG FN GG+ + PEF++L++ALS YTA+FIAE VR+G++ V + Sbjct: 292 LALIATGFPVSFDVPKLGTFNLTGGAQIKPEFLALFLALSFYTASFIAETVRAGVLGVSK 351 Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354 GQ EAA A+GL + RL+++PQA+R IIPPL+SQYLNL+KNSSLA+A+G+ DLV+VGG Sbjct: 352 GQTEAAYAVGLRSGQTMRLIIVPQALRIIIPPLSSQYLNLIKNSSLAIAIGYPDLVAVGG 411 Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 TI+NQTGQA+E++ IWM IYL +S++++ MN NAK+AL E+ Sbjct: 412 TILNQTGQAVEVVAIWMVIYLGISLIVSGLMNWFNAKMALVER 454 >gi|326408765|gb|ADZ65830.1| His/Glu/Gln/Arg/opine family amino acid ABC transporter permease [Brucella melitensis M28] gi|326538483|gb|ADZ86698.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family protein [Brucella melitensis M5-90] Length = 397 Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust. Identities = 187/381 (49%), Positives = 257/381 (67%) Query: 17 KFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGI 76 LYD+R I Q+++ + W V N N++++N++ G GFL RAGF+I Q + Sbjct: 17 SLLYDLRARGIFYQVVVFGAVIAGIYWIVGNTITNLQRANIASGFGFLYGRAGFDISQTL 76 Query: 77 VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136 + Y SDS+Y A LVG VNT ++A G++ A+IIG LVG GRLS N L+ IC VYVEVF Sbjct: 77 IQYNSDSTYGRAFLVGLVNTLYVAALGVVTASIIGFLVGIGRLSHNWLIRNICTVYVEVF 136 Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196 RNIPPL+VIFF Y VLSVLP S +P ++NNRG P A + ++ Sbjct: 137 RNIPPLLVIFFWYFGVLSVLPPVRQSYSMPLSTYINNRGFFMPLPVWGEGAWAVPVALLI 196 Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256 GI+ S R ++ TG+ + +S LI GLP L LIA + + FD P LG FN Sbjct: 197 GILASFAVARWAKRRQMATGQPFHTIRVSAALIIGLPILALIATGFPVSFDVPKLGTFNL 256 Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316 GG+ + PEF++L++ALS YTA+FIAE VR+G++ V +GQ EAA A+GL + RL+++ Sbjct: 257 TGGAQIKPEFLALFLALSFYTASFIAETVRAGVLGVSKGQTEAAYAVGLRSGQTMRLIIV 316 Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376 PQA+R IIPPL+SQYLNL+KNSSLA+A+G+ DLV+VGGTI+NQTGQA+E++ IWM IYL Sbjct: 317 PQALRIIIPPLSSQYLNLIKNSSLAIAIGYPDLVAVGGTILNQTGQAVEVVAIWMVIYLG 376 Query: 377 LSIMIALFMNRLNAKIALKEK 397 +S++++ MN NAK+AL E+ Sbjct: 377 ISLIVSGLMNWFNAKMALVER 397 >gi|254707030|ref|ZP_05168858.1| amino acid ABC transporter, permease protein [Brucella pinnipedialis M163/99/10] gi|254718862|ref|ZP_05180673.1| amino acid ABC transporter, permease protein [Brucella sp. 83/13] gi|256369176|ref|YP_003106684.1| amino acid ABC transporter, permease protein [Brucella microti CCM 4915] gi|261314498|ref|ZP_05953695.1| polar amino acid ABC transporter [Brucella pinnipedialis M163/99/10] gi|265983847|ref|ZP_06096582.1| polar amino acid ABC transporter [Brucella sp. 83/13] gi|306837635|ref|ZP_07470505.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Brucella sp. NF 2653] gi|255999336|gb|ACU47735.1| amino acid ABC transporter, permease protein [Brucella microti CCM 4915] gi|261303524|gb|EEY07021.1| polar amino acid ABC transporter [Brucella pinnipedialis M163/99/10] gi|264662439|gb|EEZ32700.1| polar amino acid ABC transporter [Brucella sp. 83/13] gi|306407284|gb|EFM63493.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Brucella sp. NF 2653] Length = 397 Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust. Identities = 187/381 (49%), Positives = 257/381 (67%) Query: 17 KFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGI 76 LYD R I Q+++ + W V N N++++N++ G GFL RAGF+I Q + Sbjct: 17 SLLYDPRARGIFYQVVVFGAVIAGIYWIVGNTITNLQRANIASGFGFLYGRAGFDISQTL 76 Query: 77 VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136 + Y SDS+Y A LVG VNT ++A G++ A+IIG LVG GRLS N L+ IC VYVEVF Sbjct: 77 IQYNSDSTYGRAFLVGLVNTLYVAALGVVTASIIGFLVGIGRLSHNWLIRNICTVYVEVF 136 Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196 RNIPPL+VIFF Y VLSVLP S +P ++NNRG P+ A + ++ Sbjct: 137 RNIPPLLVIFFWYFGVLSVLPPVRQSYSMPLSTYINNRGFFMPSPVWGEGAWALPVALLI 196 Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256 GI+ S R ++ TG+ + +S LI GLP L LIA + + FD P LG FN Sbjct: 197 GILASFAVARWAKRRQMATGQPFHTIRVSAALIIGLPILALIATGFPVSFDVPKLGTFNL 256 Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316 GG+ + PEF++L++ALS YTA+FIAE VR+G++ V +GQ EAA A+GL + RL+++ Sbjct: 257 TGGAQIKPEFLALFLALSFYTASFIAETVRAGVLGVSKGQTEAAYAVGLRSGQTMRLIIV 316 Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376 PQA+R IIPPL+SQYLNL+KNSSLA+A+G+ DLV+VGGTI+NQTGQA+E++ IWM IYL Sbjct: 317 PQALRIIIPPLSSQYLNLIKNSSLAIAIGYPDLVAVGGTILNQTGQAVEVVAIWMVIYLG 376 Query: 377 LSIMIALFMNRLNAKIALKEK 397 +S++++ MN NAK+AL E+ Sbjct: 377 ISLIVSGLMNWFNAKMALVER 397 >gi|306843689|ref|ZP_07476289.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Brucella sp. BO1] gi|306275999|gb|EFM57708.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Brucella sp. BO1] Length = 397 Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust. Identities = 187/381 (49%), Positives = 257/381 (67%) Query: 17 KFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGI 76 LYD R I Q+++ + W V N N++++N++ G GFL RAGF+I Q + Sbjct: 17 SLLYDPRARGIFYQVVVFGAVIAGIYWIVGNTITNLQRANIASGFGFLYGRAGFDISQTL 76 Query: 77 VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136 + Y SDS+Y A LVG VNT ++A G++ A+IIG LVG GRLS N L+ IC VYVEVF Sbjct: 77 IQYNSDSTYGWAFLVGLVNTLYVAALGVVTASIIGFLVGIGRLSHNWLIRNICTVYVEVF 136 Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196 RNIPPL+VIFF Y VLSVLP S +P ++NNRG P+ A + ++ Sbjct: 137 RNIPPLLVIFFWYFGVLSVLPPVRQSYSMPLSTYINNRGFFMPSPVWGEGAWTLPVALLI 196 Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256 GI+ S R ++ TG+ + +S LI GLP L LIA + + FD P LG FN Sbjct: 197 GILASFAVARWAKRRQMATGQPFHTIRVSAALIIGLPILALIATGFPVSFDVPKLGTFNL 256 Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316 GG+ + PEF++L++ALS YTA+FIAE VR+G++ V +GQ EAA A+GL + RL+++ Sbjct: 257 TGGAQIKPEFLALFLALSFYTASFIAETVRAGVLGVSKGQTEAAYAVGLRSGQTMRLIIV 316 Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376 PQA+R IIPPL+SQYLNL+KNSSLA+A+G+ DLV+VGGTI+NQTGQA+E++ IWM IYL Sbjct: 317 PQALRIIIPPLSSQYLNLIKNSSLAIAIGYPDLVAVGGTILNQTGQAVEVVAIWMVIYLG 376 Query: 377 LSIMIALFMNRLNAKIALKEK 397 +S++++ MN NAK+AL E+ Sbjct: 377 ISLIVSGLMNWFNAKMALVER 397 >gi|17987493|ref|NP_540127.1| general L-amino acid transport system permease protein aapQ [Brucella melitensis bv. 1 str. 16M] gi|256044432|ref|ZP_05447336.1| general L-amino acid transport system permease protein aapQ [Brucella melitensis bv. 1 str. Rev.1] gi|265990853|ref|ZP_06103410.1| polar amino acid ABC transporter [Brucella melitensis bv. 1 str. Rev.1] gi|17983191|gb|AAL52391.1| general l-amino acid transport system permease protein aapq [Brucella melitensis bv. 1 str. 16M] gi|263001637|gb|EEZ14212.1| polar amino acid ABC transporter [Brucella melitensis bv. 1 str. Rev.1] Length = 397 Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust. Identities = 187/381 (49%), Positives = 257/381 (67%) Query: 17 KFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGI 76 LYD R I Q+++ + W V N N++++N++ G GFL RAGF+I Q + Sbjct: 17 SLLYDPRARGIFYQVVVFGAVIAGIYWIVGNTITNLQRANIASGFGFLYGRAGFDISQTL 76 Query: 77 VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136 + Y SDS+Y A LVG VNT ++A G++ A+IIG LVG GRLS N L+ IC VYVEVF Sbjct: 77 IQYNSDSTYGRAFLVGLVNTLYVAALGVVTASIIGFLVGIGRLSHNWLIRNICTVYVEVF 136 Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196 RNIPPL+VIFF Y VLSVLP S +P ++NNRG P+ A + ++ Sbjct: 137 RNIPPLLVIFFWYFGVLSVLPPVRQSYSMPLSTYINNRGFFMPSPVWGEGAWAVPVALLI 196 Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256 GI+ S R ++ TG+ + +S LI GLP L LIA + + FD P LG FN Sbjct: 197 GILASFAVARWAKRRQMATGQPFHTIRVSAALIIGLPILALIATGFPVSFDVPKLGTFNL 256 Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316 GG+ + PEF++L++ALS YTA+FIAE VR+G++ V +GQ EAA A+GL + RL+++ Sbjct: 257 TGGAQIKPEFLALFLALSFYTASFIAETVRAGVLGVSKGQTEAAYAVGLRSGQTMRLIIV 316 Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376 PQA+R IIPPL+SQYLNL+KNSSLA+A+G+ DLV+VGGTI+NQTGQA+E++ IWM IYL Sbjct: 317 PQALRIIIPPLSSQYLNLIKNSSLAIAIGYPDLVAVGGTILNQTGQAVEVVAIWMVIYLG 376 Query: 377 LSIMIALFMNRLNAKIALKEK 397 +S++++ MN NAK+AL E+ Sbjct: 377 ISLIVSGLMNWFNAKMALVER 397 >gi|256113276|ref|ZP_05454144.1| general L-amino acid transport system permease protein aapQ [Brucella melitensis bv. 3 str. Ether] gi|265994689|ref|ZP_06107246.1| polar amino acid ABC transporter [Brucella melitensis bv. 3 str. Ether] gi|262765802|gb|EEZ11591.1| polar amino acid ABC transporter [Brucella melitensis bv. 3 str. Ether] Length = 397 Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust. Identities = 187/381 (49%), Positives = 257/381 (67%) Query: 17 KFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGI 76 LYD R I Q+++ + W V N N++++N++ G GFL RAGF+I Q + Sbjct: 17 SLLYDPRARGIFYQVVVFGAVIAGIYWIVGNTITNLQRANIASGFGFLYGRAGFDISQTL 76 Query: 77 VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136 + Y SDS+Y A LVG VNT ++A G++ A+IIG LVG GRLS N L+ IC VYVEVF Sbjct: 77 IQYNSDSTYGRAFLVGLVNTLYVAALGVVTASIIGFLVGIGRLSHNWLIRNICTVYVEVF 136 Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196 RNIPPL+VIFF Y VLSVLP S +P ++NNRG P+ A + ++ Sbjct: 137 RNIPPLLVIFFWYFGVLSVLPPVRQSYSMPLSTYINNRGFFMPSPVWGEGAWAVPVALLI 196 Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256 GI+ S R ++ TG+ + +S LI GLP L LIA + + FD P LG FN Sbjct: 197 GILASFAVARWAKRRQMATGQPFHAIRVSAALIIGLPILALIATGFPVSFDVPKLGTFNL 256 Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316 GG+ + PEF++L++ALS YTA+FIAE VR+G++ V +GQ EAA A+GL + RL+++ Sbjct: 257 TGGAQIKPEFLALFLALSFYTASFIAETVRAGVLGVSKGQTEAAYAVGLRSGQTMRLIIV 316 Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376 PQA+R IIPPL+SQYLNL+KNSSLA+A+G+ DLV+VGGTI+NQTGQA+E++ IWM IYL Sbjct: 317 PQALRIIIPPLSSQYLNLIKNSSLAIAIGYPDLVAVGGTILNQTGQAVEVVAIWMVIYLG 376 Query: 377 LSIMIALFMNRLNAKIALKEK 397 +S++++ MN NAK+AL E+ Sbjct: 377 ISLIVSGLMNWFNAKMALVER 397 >gi|294852107|ref|ZP_06792780.1| general L-amino acid transport system permease [Brucella sp. NVSL 07-0026] gi|294820696|gb|EFG37695.1| general L-amino acid transport system permease [Brucella sp. NVSL 07-0026] Length = 454 Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust. Identities = 190/403 (47%), Positives = 264/403 (65%), Gaps = 8/403 (1%) Query: 3 KNARKTVTRYFSRMK--------FLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEK 54 + RK + YF + LYD R I Q+++ + W V N N+++ Sbjct: 52 ERHRKHMASYFGTERRQGSGGTSLLYDPRARGIFYQVVVFGAVIAGIYWIVGNTITNLQR 111 Query: 55 SNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLV 114 +N++ G GFL RAGF+I Q ++ Y SDS+Y A LVG VNT ++A G++ A+IIG LV Sbjct: 112 ANIASGFGFLYGRAGFDISQTLIQYNSDSTYGRAFLVGLVNTLYVAALGVVTASIIGFLV 171 Query: 115 GAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNR 174 G GRLS N L+ IC VYVEVFRNIPPL+VIFF Y VLSVLP S +P ++NNR Sbjct: 172 GIGRLSHNWLIRNICTVYVEVFRNIPPLLVIFFWYFGVLSVLPPVRQSYSMPLSTYINNR 231 Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234 G P+ A + ++GI+ S R ++ TG+ + +S LI GLP Sbjct: 232 GFFMPSPVWGEGAWALPVALLIGILASFAVARWAKRRQMATGQPFHTIRVSAALIIGLPI 291 Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294 L LIA + + FD P LG FN GG+ + PEF++L++ALS YTA+FIAE VR+G++ V + Sbjct: 292 LALIATGFPVSFDVPKLGTFNLTGGAQIKPEFLALFLALSFYTASFIAETVRAGVLGVSK 351 Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354 GQ EAA A+GL + RL+++PQA+R IIPPL+SQYLNL+KNSSLA+A+G+ DLV+VGG Sbjct: 352 GQTEAAYAVGLRSGQTMRLIIVPQALRIIIPPLSSQYLNLIKNSSLAIAIGYPDLVAVGG 411 Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 TI+NQTG+A+E++ IWM IYL +S++++ MN NAK+AL E+ Sbjct: 412 TILNQTGRAVEVVAIWMVIYLGISLIVSGLMNWFNAKMALVER 454 >gi|307316995|ref|ZP_07596436.1| polar amino acid ABC transporter, inner membrane subunit [Sinorhizobium meliloti AK83] gi|306897083|gb|EFN27828.1| polar amino acid ABC transporter, inner membrane subunit [Sinorhizobium meliloti AK83] Length = 397 Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust. Identities = 200/387 (51%), Positives = 272/387 (70%) Query: 11 RYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGF 70 R S + D +V I Q I ++L + W V+N +N+ ++N++ G F+ RAGF Sbjct: 11 RSRSSGSIINDPQVRGIFYQAITIIILAALIYWIVDNTVDNLRRANIASGYDFVRSRAGF 70 Query: 71 EIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICR 130 ++ Q ++ +TSDS+Y A+LVGF+NT +A +G+I ATIIG +VG GRLS N ++A + Sbjct: 71 DVGQSLISFTSDSTYGRALLVGFINTLLVAITGIITATIIGFIVGIGRLSHNWIIAKLSL 130 Query: 131 VYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIF 190 YVEVFRNIPPL+VIFF Y VLS+LP ++ LPF +FL+NRG++FP + A+ Sbjct: 131 AYVEVFRNIPPLLVIFFWYSGVLSILPQARDALALPFDIFLSNRGVAFPRPIAEEGAEYT 190 Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 + +FV+ + S+F R +R TG+ LP+L+ LI GLP + + + FD PV Sbjct: 191 LLAFVIAVAASVFFARYARQRQLATGERLPVLWTVLGLIIGLPLVTFLVTGAPITFDIPV 250 Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 G+FN GGS V PEFMSL++ALS YTAAFIAEIVR+G+ V +GQ EAA ALG+ Sbjct: 251 AGKFNLTGGSVVGPEFMSLFLALSFYTAAFIAEIVRAGIRGVSKGQTEAAHALGIRPALT 310 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370 TRLV++PQAMR IIPPLTSQYLNL KNSSLAVA+G+ADLV+VGGTI+NQTGQ+IEI+ IW Sbjct: 311 TRLVVVPQAMRIIIPPLTSQYLNLTKNSSLAVAIGYADLVAVGGTILNQTGQSIEIVSIW 370 Query: 371 MFIYLSLSIMIALFMNRLNAKIALKEK 397 + +YLSLS+ +LFMN NA++AL E+ Sbjct: 371 LIVYLSLSLATSLFMNWYNARMALVER 397 >gi|256159475|ref|ZP_05457243.1| amino acid ABC transporter, permease protein [Brucella ceti M490/95/1] gi|256254761|ref|ZP_05460297.1| amino acid ABC transporter, permease protein [Brucella ceti B1/94] gi|260168487|ref|ZP_05755298.1| amino acid ABC transporter, permease protein [Brucella sp. F5/99] gi|261221940|ref|ZP_05936221.1| polar amino acid ABC transporter [Brucella ceti B1/94] gi|261757955|ref|ZP_06001664.1| polar amino acid ABC transporter [Brucella sp. F5/99] gi|265997903|ref|ZP_06110460.1| polar amino acid ABC transporter [Brucella ceti M490/95/1] gi|260920524|gb|EEX87177.1| polar amino acid ABC transporter [Brucella ceti B1/94] gi|261737939|gb|EEY25935.1| polar amino acid ABC transporter [Brucella sp. F5/99] gi|262552371|gb|EEZ08361.1| polar amino acid ABC transporter [Brucella ceti M490/95/1] Length = 397 Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust. Identities = 186/381 (48%), Positives = 257/381 (67%) Query: 17 KFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGI 76 LYD R I Q+++ + W V N N++++N++ G GF+ RAGF+I Q + Sbjct: 17 SLLYDPRARGIFYQVVVFGAVIAGIYWIVGNTITNLQRANIASGFGFIYGRAGFDISQTL 76 Query: 77 VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136 + Y SDS+Y A LVG VNT ++A G++ A+IIG LVG GRLS N L+ IC VYVEVF Sbjct: 77 IQYNSDSTYGRAFLVGLVNTLYVAALGVVTASIIGFLVGIGRLSHNWLIRNICTVYVEVF 136 Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196 RNIPPL+VIFF Y VLSVLP S +P ++NNRG P+ A + ++ Sbjct: 137 RNIPPLLVIFFWYFGVLSVLPPVRQSYSMPLSTYINNRGFFMPSPVWGEGAWALPVALLI 196 Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256 GI+ S R ++ TG+ + +S LI GLP L LIA + + FD P LG FN Sbjct: 197 GILASFAVARWAKRRQMATGQPFHTIRVSAALIIGLPILALIATGFPVSFDVPKLGTFNL 256 Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316 GG+ + PEF++L++ALS YTA+FIAE VR+G++ V +GQ EAA A+GL + RL+++ Sbjct: 257 TGGAQIKPEFLALFLALSFYTASFIAETVRAGVLGVSKGQTEAAYAVGLRSGQTMRLIIV 316 Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376 PQA+R IIPPL+SQYLNL+KNSSLA+A+G+ DLV+VGGTI+NQTGQA+E++ IWM IYL Sbjct: 317 PQALRIIIPPLSSQYLNLIKNSSLAIAIGYPDLVAVGGTILNQTGQAVEVVAIWMVIYLG 376 Query: 377 LSIMIALFMNRLNAKIALKEK 397 +S++++ MN NAK+AL E+ Sbjct: 377 ISLIVSGLMNWFNAKMALVER 397 >gi|254713862|ref|ZP_05175673.1| amino acid ABC transporter, permease protein [Brucella ceti M644/93/1] gi|254717081|ref|ZP_05178892.1| amino acid ABC transporter, permease protein [Brucella ceti M13/05/1] gi|261218892|ref|ZP_05933173.1| polar amino acid ABC transporter [Brucella ceti M13/05/1] gi|261321609|ref|ZP_05960806.1| polar amino acid ABC transporter [Brucella ceti M644/93/1] gi|260923981|gb|EEX90549.1| polar amino acid ABC transporter [Brucella ceti M13/05/1] gi|261294299|gb|EEX97795.1| polar amino acid ABC transporter [Brucella ceti M644/93/1] Length = 397 Score = 369 bits (948), Expect = e-100, Method: Compositional matrix adjust. Identities = 186/381 (48%), Positives = 257/381 (67%) Query: 17 KFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGI 76 LYD R I Q+++ + W V N N++++N++ G GFL RAGF+I Q + Sbjct: 17 SLLYDPRARGIFYQVVVFGAVIAGIYWIVGNTITNLQRANIASGFGFLYGRAGFDISQTL 76 Query: 77 VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136 + Y SDS+Y A LVG VNT ++A G++ A+IIG LVG GRLS N L+ IC VYVEVF Sbjct: 77 IQYNSDSTYGRAFLVGLVNTLYVAALGVVTASIIGFLVGIGRLSHNWLIRNICTVYVEVF 136 Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196 RNIPPL+VIFF Y VLSVLP S +P ++NNRG P+ A + ++ Sbjct: 137 RNIPPLLVIFFWYFGVLSVLPPVRQSYSMPLSTYINNRGFFMPSPVWGEGAWALPVALLI 196 Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256 GI+ S R ++ TG+ + +S LI GLP L LIA + + FD P LG FN Sbjct: 197 GILASFAVARWAKRRQMATGQPFHTIRVSAALIIGLPILALIATGFPVSFDVPKLGTFNL 256 Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316 GG+ + PEF++L++ALS YTA+FIAE VR+G++ V +GQ EAA A+GL + RL+++ Sbjct: 257 TGGAQIKPEFLALFLALSFYTASFIAETVRAGVLGVSKGQTEAAYAVGLRSGQTMRLIIV 316 Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376 PQA+R IIPPL+SQYLNL+KNSSLA+A+G+ D+V+VGGTI+NQTGQA+E++ IWM IYL Sbjct: 317 PQALRIIIPPLSSQYLNLIKNSSLAIAIGYPDVVAVGGTILNQTGQAVEVVAIWMVIYLG 376 Query: 377 LSIMIALFMNRLNAKIALKEK 397 +S++++ MN NAK+AL E+ Sbjct: 377 ISLIVSGLMNWFNAKMALVER 397 >gi|15965230|ref|NP_385583.1| general L-amino acid transport permease ABC transporter protein [Sinorhizobium meliloti 1021] gi|15074410|emb|CAC46056.1| Probable general L-amino acid transport permease ABC transporter [Sinorhizobium meliloti 1021] Length = 397 Score = 369 bits (948), Expect = e-100, Method: Compositional matrix adjust. Identities = 200/387 (51%), Positives = 272/387 (70%) Query: 11 RYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGF 70 R S + D +V I Q I ++L + W V+N +N+ ++N++ G F+ RAGF Sbjct: 11 RSRSSGSIINDPQVRGIFYQAITIIILAALIYWIVDNTVDNLRRANIASGYDFVRSRAGF 70 Query: 71 EIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICR 130 ++ Q ++ +TSDS+Y A+LVGF+NT +A +G+I ATIIG +VG GRLS N ++A + Sbjct: 71 DVGQSLISFTSDSTYGRALLVGFINTLLVAITGIITATIIGFIVGIGRLSHNWIIAKLSL 130 Query: 131 VYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIF 190 YVEVFRNIPPL+VIFF Y VLS+LP ++ LPF +FL+NRG++FP + A+ Sbjct: 131 AYVEVFRNIPPLLVIFFWYSGVLSILPQARDALALPFDIFLSNRGVAFPRPIAEEGAEYT 190 Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 + +FV+ + S+F R +R TG+ LP+L+ LI GLP + + + FD PV Sbjct: 191 LLAFVIAVAASVFFARYARKRQLATGERLPVLWTVLGLIIGLPLVTFLVTGAPITFDIPV 250 Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 G+FN GGS V PEFMSL++ALS YTAAFIAEIVR+G+ V +GQ EAA ALG+ Sbjct: 251 AGKFNLTGGSVVGPEFMSLFLALSFYTAAFIAEIVRAGIRGVSKGQTEAAHALGIRPALT 310 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370 TRLV++PQAMR IIPPLTSQYLNL KNSSLAVA+G+ADLV+VGGTI+NQTGQ+IEI+ IW Sbjct: 311 TRLVVVPQAMRIIIPPLTSQYLNLTKNSSLAVAIGYADLVAVGGTILNQTGQSIEIVSIW 370 Query: 371 MFIYLSLSIMIALFMNRLNAKIALKEK 397 + +YLSLS+ +LFMN NA++AL E+ Sbjct: 371 LIVYLSLSLATSLFMNWYNARMALVER 397 >gi|256060863|ref|ZP_05451023.1| amino acid ABC transporter, permease protein [Brucella neotomae 5K33] gi|261324860|ref|ZP_05964057.1| polar amino acid ABC transporter [Brucella neotomae 5K33] gi|261300840|gb|EEY04337.1| polar amino acid ABC transporter [Brucella neotomae 5K33] Length = 397 Score = 369 bits (948), Expect = e-100, Method: Compositional matrix adjust. Identities = 186/381 (48%), Positives = 256/381 (67%) Query: 17 KFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGI 76 LYD R + Q+++ + W V N N++++N++ G GFL RAGF+I Q + Sbjct: 17 SLLYDPRARGVFYQVVVFGAVIAGIYWIVGNTITNLQRANIASGFGFLYGRAGFDISQTL 76 Query: 77 VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136 + Y SDS+Y A LVG VNT ++A G++ A+IIG LVG GRLS N L+ IC VYVEVF Sbjct: 77 IQYNSDSTYGRAFLVGLVNTLYVAALGVVTASIIGFLVGIGRLSHNWLIRNICTVYVEVF 136 Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196 RNIPPL+VIFF Y VLSVLP S +P ++NNRG P+ A + ++ Sbjct: 137 RNIPPLLVIFFWYFGVLSVLPPVRQSYSMPLSTYINNRGFFMPSPVWGEGAWALPVALLI 196 Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256 GI+ S R ++ TG+ + +S LI GLP L LIA + + FD P LG FN Sbjct: 197 GILASFAVARWAKRRQMATGQPFHTIRVSAALIIGLPILALIATGFPVSFDVPKLGTFNL 256 Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316 GG+ + PEF++L++ALS YTA+FIAE VR+G++ V +GQ EAA A+GL + RL+++ Sbjct: 257 TGGAQIKPEFLALFLALSFYTASFIAETVRAGVLGVSKGQTEAAYAVGLRSGQTMRLIIV 316 Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376 PQA R IIPPL+SQYLNL+KNSSLA+A+G+ DLV+VGGTI+NQTGQA+E++ IWM IYL Sbjct: 317 PQARRIIIPPLSSQYLNLIKNSSLAIAIGYPDLVAVGGTILNQTGQAVEVVAIWMVIYLG 376 Query: 377 LSIMIALFMNRLNAKIALKEK 397 +S++++ MN NAK+AL E+ Sbjct: 377 ISLIVSGLMNWFNAKMALVER 397 >gi|306842008|ref|ZP_07474681.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Brucella sp. BO2] gi|306287849|gb|EFM59269.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Brucella sp. BO2] Length = 397 Score = 369 bits (947), Expect = e-100, Method: Compositional matrix adjust. Identities = 187/381 (49%), Positives = 256/381 (67%) Query: 17 KFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGI 76 LYD R I Q+++ + W V N N++++N++ G GFL RAGF+I Q + Sbjct: 17 SLLYDPRARGIFYQVVVFGAVIAGLYWIVGNTITNLQRANIASGFGFLYGRAGFDISQTL 76 Query: 77 VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136 + Y SDS+Y A LVG VNT ++A G+I A+IIG LVG GRLS N L+ IC VYVEVF Sbjct: 77 IQYNSDSTYGRAFLVGLVNTLYVAALGVITASIIGFLVGIGRLSHNWLIRNICTVYVEVF 136 Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196 RNIPPL+VIFF Y VLSVLP S +P ++NNRG P+ A + ++ Sbjct: 137 RNIPPLLVIFFWYFGVLSVLPPVRQSYSMPLSTYINNRGFFMPSPVWGEGAWALPVALLI 196 Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256 GI+ S ++ TG+ + +S LI GLP L LIA + + FD P LG FN Sbjct: 197 GILASFAVAHWAKRRQMATGQPFHTIRVSAALIIGLPILALIATGFPVSFDVPKLGTFNL 256 Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316 GG+ + PEF++L++ALS YTA+FIAE VR+G++ V +GQ EAA A+GL + RL+++ Sbjct: 257 TGGAQIKPEFLALFLALSFYTASFIAETVRAGVLGVSKGQTEAAYAVGLRSGQTMRLIIV 316 Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376 PQA+R IIPPL+SQYLNL+KNSSLA+A+G+ DLV+VGGTI+NQTGQA+E++ IWM IYL Sbjct: 317 PQALRIIIPPLSSQYLNLIKNSSLAIAIGYPDLVAVGGTILNQTGQAVEVVAIWMVIYLG 376 Query: 377 LSIMIALFMNRLNAKIALKEK 397 +S++++ MN NAK+AL E+ Sbjct: 377 ISLIVSGLMNWFNAKMALVER 397 >gi|163843015|ref|YP_001627419.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Brucella suis ATCC 23445] gi|163673738|gb|ABY37849.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Brucella suis ATCC 23445] Length = 397 Score = 368 bits (945), Expect = e-100, Method: Compositional matrix adjust. Identities = 186/381 (48%), Positives = 256/381 (67%) Query: 17 KFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGI 76 LYD R I Q+++ + W V N N++++N++ G GFL RAGF+I Q + Sbjct: 17 SLLYDPRARGIFYQVVVFGAVIAGIYWIVGNTITNLQRANIASGFGFLYGRAGFDISQTL 76 Query: 77 VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136 + Y SDS+Y A LVG VNT ++A G++ A+IIG LVG GRLS N L+ IC VYVEVF Sbjct: 77 IQYNSDSTYGRAFLVGLVNTLYVAALGIVTASIIGFLVGIGRLSHNWLIRNICTVYVEVF 136 Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196 RNIPPL+VIFF Y VLSVLP S +P ++NNRG P+ A + ++ Sbjct: 137 RNIPPLLVIFFWYFGVLSVLPPVRQSYSMPLSTYINNRGFFMPSPVWGEGAWALPVALLI 196 Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256 GI+ S R ++ TG+ + +S LI GLP L LIA + + FD P LG FN Sbjct: 197 GILASFAVARWAKRRQMATGQPFHTIRVSAALIIGLPILALIATGFPVSFDVPKLGTFNL 256 Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316 GG+ + PEF++ ++ALS YTA+FIAE VR+G++ V +GQ EAA A+GL + RL+++ Sbjct: 257 TGGAQIKPEFLAPFLALSFYTASFIAETVRAGVLGVSKGQTEAAYAVGLRSGQTMRLIIV 316 Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376 PQA+R IIPPL+SQYLNL+KNSSLA+A+G+ DLV+VGGTI+NQTGQA+E++ IWM IYL Sbjct: 317 PQALRIIIPPLSSQYLNLMKNSSLAIAIGYPDLVAVGGTILNQTGQAVEVVAIWMVIYLG 376 Query: 377 LSIMIALFMNRLNAKIALKEK 397 +S++++ MN NAK+AL E+ Sbjct: 377 ISLIVSGLMNWFNAKMALVER 397 >gi|254701520|ref|ZP_05163348.1| amino acid ABC transporter, permease protein [Brucella suis bv. 5 str. 513] gi|261752068|ref|ZP_05995777.1| polar amino acid ABC transporter [Brucella suis bv. 5 str. 513] gi|261741821|gb|EEY29747.1| polar amino acid ABC transporter [Brucella suis bv. 5 str. 513] Length = 397 Score = 368 bits (945), Expect = e-100, Method: Compositional matrix adjust. Identities = 186/381 (48%), Positives = 256/381 (67%) Query: 17 KFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGI 76 LY R I Q+++ + W V N N++++N++ G GFL RAGF+I Q + Sbjct: 17 SLLYGPRARGIFYQVVVFGAVIAGIYWIVGNTITNLQRANIASGFGFLYGRAGFDISQTL 76 Query: 77 VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136 + Y SDS+Y A LVG VNT ++A G++ A+IIG LVG GRLS N L+ IC VYVEVF Sbjct: 77 IQYNSDSTYGRAFLVGLVNTLYVAALGVVTASIIGFLVGIGRLSHNWLIRNICTVYVEVF 136 Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196 RNIPPL+VIFF Y VLSVLP S +P ++NNRG P+ A + ++ Sbjct: 137 RNIPPLLVIFFWYFGVLSVLPPVRQSYSMPLSTYINNRGFFMPSPVWGEGAWALPVALLI 196 Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256 GI+ S R ++ TG+ + +S LI GLP L LIA + + FD P LG FN Sbjct: 197 GILASFAVARWAKRRQMATGQPFHTIRVSAALIIGLPILALIATGFPVSFDVPKLGTFNL 256 Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316 GG+ + PEF++L++ALS YTA+FIAE VR+G++ V +GQ EAA A+GL + RL+++ Sbjct: 257 TGGAQIKPEFLALFLALSFYTASFIAETVRAGVLGVSKGQTEAAYAVGLRSGQTMRLIIV 316 Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376 PQA+R IIPPL+SQYLNL+KNSSLA+A+G+ DLV+VGGTI+NQTGQA+E++ IWM IYL Sbjct: 317 PQALRIIIPPLSSQYLNLIKNSSLAIAIGYPDLVAVGGTILNQTGQAVEVVAIWMVIYLG 376 Query: 377 LSIMIALFMNRLNAKIALKEK 397 +S++++ MN NAK+AL E+ Sbjct: 377 ISLIVSGLMNWFNAKMALVER 397 >gi|307309253|ref|ZP_07588921.1| polar amino acid ABC transporter, inner membrane subunit [Sinorhizobium meliloti BL225C] gi|306900254|gb|EFN30871.1| polar amino acid ABC transporter, inner membrane subunit [Sinorhizobium meliloti BL225C] Length = 397 Score = 368 bits (945), Expect = e-100, Method: Compositional matrix adjust. Identities = 200/387 (51%), Positives = 271/387 (70%) Query: 11 RYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGF 70 R S + D +V I Q I ++L + W V+N +N+ ++N++ G F+ RAGF Sbjct: 11 RSRSSGSIINDPQVRGIFYQAITIIILAALIYWIVDNTVDNLRRANIASGYDFVRSRAGF 70 Query: 71 EIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICR 130 ++ Q ++ +TSDS+Y A+LVGF+NT +A +G+I ATIIG +VG GRLS N ++A + Sbjct: 71 DVGQSLISFTSDSTYGRALLVGFINTLLVAITGIITATIIGFIVGIGRLSHNWIIAKLSL 130 Query: 131 VYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIF 190 YVEVFRNIPPL+VIFF Y VLS+LP ++ LPF +FL+NRG++FP + A+ Sbjct: 131 AYVEVFRNIPPLLVIFFWYSGVLSILPQARDALALPFDIFLSNRGVAFPRPIAEEGAEYT 190 Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 +FV+ + S+F R +R TG+ LP+L+ LI GLP + + + FD PV Sbjct: 191 PLAFVIAVAASVFFARYARKRQLATGERLPVLWTVLGLIIGLPLVTFLVTGAPITFDIPV 250 Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 G+FN GGS V PEFMSL++ALS YTAAFIAEIVR+G+ V +GQ EAA ALG+ Sbjct: 251 AGKFNLTGGSVVGPEFMSLFLALSFYTAAFIAEIVRAGIRGVSKGQTEAAHALGIRPALT 310 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370 TRLV++PQAMR IIPPLTSQYLNL KNSSLAVA+G+ADLV+VGGTI+NQTGQ+IEI+ IW Sbjct: 311 TRLVVVPQAMRIIIPPLTSQYLNLTKNSSLAVAIGYADLVAVGGTILNQTGQSIEIVSIW 370 Query: 371 MFIYLSLSIMIALFMNRLNAKIALKEK 397 + +YLSLS+ +LFMN NA++AL E+ Sbjct: 371 LIVYLSLSLATSLFMNWYNARMALVER 397 >gi|23501630|ref|NP_697757.1| amino acid ABC transporter permease [Brucella suis 1330] gi|161618713|ref|YP_001592600.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Brucella canis ATCC 23365] gi|254704069|ref|ZP_05165897.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Brucella suis bv. 3 str. 686] gi|260566683|ref|ZP_05837153.1| polar amino acid ABC transporter [Brucella suis bv. 4 str. 40] gi|261754727|ref|ZP_05998436.1| polar amino acid ABC transporter [Brucella suis bv. 3 str. 686] gi|23347547|gb|AAN29672.1| amino acid ABC transporter, permease protein [Brucella suis 1330] gi|161335524|gb|ABX61829.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Brucella canis ATCC 23365] gi|260156201|gb|EEW91281.1| polar amino acid ABC transporter [Brucella suis bv. 4 str. 40] gi|261744480|gb|EEY32406.1| polar amino acid ABC transporter [Brucella suis bv. 3 str. 686] Length = 397 Score = 367 bits (942), Expect = 2e-99, Method: Compositional matrix adjust. Identities = 186/381 (48%), Positives = 256/381 (67%) Query: 17 KFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGI 76 LYD R I Q+++ + W V N N++++N++ G GFL RAGF+I Q + Sbjct: 17 SLLYDPRARGIFYQVVVFGAVIAGIYWIVGNTITNLQRANIASGFGFLYGRAGFDISQTL 76 Query: 77 VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136 + Y SDS+Y A LVG VNT ++A G++ A+IIG LVG GRLS N L+ I VYVEVF Sbjct: 77 IQYNSDSTYGRAFLVGLVNTLYVAALGIVTASIIGFLVGIGRLSHNWLIRNISTVYVEVF 136 Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196 RNIPPL+VIFF Y VLSVLP S +P ++NNRG P+ A + ++ Sbjct: 137 RNIPPLLVIFFWYFGVLSVLPPVRQSYSMPLSTYINNRGFFMPSPVWGEGAWALPVALLI 196 Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256 GI+ S R ++ TG+ + +S LI GLP L LIA + + FD P LG FN Sbjct: 197 GILASFAVARWAKRRQMATGQPFHTIRVSAALIIGLPILALIATGFPVSFDVPKLGTFNL 256 Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316 GG+ + PEF++L++ALS YTA+FIAE VR+G++ V +GQ EAA A+GL + RL+++ Sbjct: 257 TGGAQIKPEFLALFLALSFYTASFIAETVRAGVLGVSKGQTEAAYAVGLRSGQTMRLIIV 316 Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376 PQA+R IIPPL+SQYLNL+KNSSLA+A+G+ DLV+VGGTI+NQTGQA+E++ IWM IYL Sbjct: 317 PQALRIIIPPLSSQYLNLIKNSSLAIAIGYPDLVAVGGTILNQTGQAVEVVAIWMVIYLG 376 Query: 377 LSIMIALFMNRLNAKIALKEK 397 +S++++ MN NAK+AL E+ Sbjct: 377 ISLIVSGLMNWFNAKMALVER 397 >gi|222085839|ref|YP_002544370.1| general L-amino acid ABC transporter [Agrobacterium radiobacter K84] gi|221723287|gb|ACM26443.1| general L-amino acid ABC transporter [Agrobacterium radiobacter K84] Length = 396 Score = 361 bits (926), Expect = 1e-97, Method: Compositional matrix adjust. Identities = 186/379 (49%), Positives = 259/379 (68%) Query: 19 LYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVP 78 +Y+ +V + Q++ ++L + V N+ +N+ SN S G FL+ RAGF + Q ++P Sbjct: 18 IYNPKVRGLFYQVLTVIILVAAAWFIVQNIIDNLRASNQSFGFSFLTGRAGFNLGQALLP 77 Query: 79 YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138 ++SDS+ A++VG +NT ++ G+I ATIIG L+G GRLS N L+A +C+ YVE+FRN Sbjct: 78 FSSDSTNTQALIVGLLNTIVISICGIIAATIIGFLIGIGRLSKNWLIAKLCQAYVELFRN 137 Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198 IPPL+VIFF Y VL +LP ++ LPF +L+NRGL+FP+ + V+ I Sbjct: 138 IPPLLVIFFWYSGVLVLLPQARDALHLPFSSYLSNRGLAFPSPIFGAGMWAVGAAIVIAI 197 Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258 V F R + TG+ +++S LI GLP L + L FD PV G+FN G Sbjct: 198 VAVFFLARWAHRRQAATGQQFHTIWVSIALIVGLPLLTFLVSGRPLSFDYPVAGKFNLTG 257 Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G V PEF+SL++ALS YTA+FIAEIVR G+ V +GQ EAA ALGL TRL+++PQ Sbjct: 258 GFVVGPEFISLFLALSFYTASFIAEIVRGGIRGVAKGQSEAASALGLRSSAITRLIVIPQ 317 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378 A+R IIPPLTSQYLNL KNSSLA+A+G+ADLV+VGG I+NQ+G+AIE+++IWM +YL+LS Sbjct: 318 ALRIIIPPLTSQYLNLTKNSSLAIAIGYADLVAVGGVILNQSGRAIEVVIIWMIVYLTLS 377 Query: 379 IMIALFMNRLNAKIALKEK 397 I+ +LFMN NAK+AL E+ Sbjct: 378 IVTSLFMNWFNAKMALVER 396 >gi|190891586|ref|YP_001978128.1| general L-amino acid ABC transporter, permease protein [Rhizobium etli CIAT 652] gi|190696865|gb|ACE90950.1| general L-amino acid ABC transporter, permease protein [Rhizobium etli CIAT 652] Length = 406 Score = 360 bits (923), Expect = 3e-97, Method: Compositional matrix adjust. Identities = 201/385 (52%), Positives = 265/385 (68%) Query: 13 FSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEI 72 +S LYD + I Q++ +LL V W +N N+ ++N++ G GFL+ RAGFE+ Sbjct: 22 WSFQSALYDPTIRGIFFQVLTIVLLVVFVWWVAHNTAVNLARANIASGFGFLNGRAGFEV 81 Query: 73 DQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVY 132 Q ++ Y+SDS+Y A++VG +NT +A +G+I ATIIG ++G GRLS N L+A +C VY Sbjct: 82 GQSLIAYSSDSTYGRALVVGLLNTLLIAVTGIITATIIGFIIGIGRLSRNWLIAKLCTVY 141 Query: 133 VEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVF 192 VEVFRNIPPL+VIFF Y VL+VLP S+ LP G +LNNRGLSFP + Sbjct: 142 VEVFRNIPPLLVIFFWYSGVLAVLPNARESLHLPLGAYLNNRGLSFPKPIFGDTFWLVGV 201 Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252 + V+ IV ++ R + TG+ ++ S L+ GLP + + L FD P+ G Sbjct: 202 ALVVAIVAAIATARWAHRRQAATGQQFHTIWASIGLLIGLPLIAFLVAGAPLSFDYPIAG 261 Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312 +FN GGS V PEFMSL++ALS YTAAFIAEIVR+G+ VP+GQ EAA ALGL TR Sbjct: 262 KFNLTGGSVVGPEFMSLFLALSFYTAAFIAEIVRAGIRGVPKGQTEAAGALGLHPSSITR 321 Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372 LV++PQA R IIPPL+SQYLNL KNSSLA+A+GFADLV+VG T +NQTGQA+E+ILIWM Sbjct: 322 LVVIPQAFRIIIPPLSSQYLNLTKNSSLAIAIGFADLVAVGSTTLNQTGQAVEVILIWMV 381 Query: 373 IYLSLSIMIALFMNRLNAKIALKEK 397 +YLSLSI+ +L MN NAK+AL E+ Sbjct: 382 VYLSLSIVTSLLMNWFNAKMALVER 406 >gi|327190791|gb|EGE57859.1| general L-amino acid ABC transporter, permease protein [Rhizobium etli CNPAF512] Length = 406 Score = 359 bits (922), Expect = 4e-97, Method: Compositional matrix adjust. Identities = 202/385 (52%), Positives = 266/385 (69%) Query: 13 FSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEI 72 +S LYD + I Q++ +LL V W +N N+ ++N++ G GFL+ RAGFE+ Sbjct: 22 WSFQSALYDPTIRGIFFQVLTIVLLVVFVWWVAHNTAVNLARANIASGFGFLNGRAGFEV 81 Query: 73 DQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVY 132 Q ++ Y+SDS+Y A++VG +NT +A +G+I ATIIG ++G GRLS N L+A +C VY Sbjct: 82 GQSLIAYSSDSTYGRALVVGLLNTILIAVTGIITATIIGFIIGIGRLSRNWLIAKLCTVY 141 Query: 133 VEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVF 192 VEVFRNIPPL+VIFF Y VL+VLP S+ LP G +LNNRGLSFP + Sbjct: 142 VEVFRNIPPLLVIFFWYSGVLAVLPNARESLHLPLGAYLNNRGLSFPKPIFGDTFWLVGV 201 Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252 +FV+ IV ++ R + TG+ ++ S L+ GLP + + L FD P+ G Sbjct: 202 AFVVAIVAAIATARWAHRRQAATGQQFHTIWASIGLLIGLPLIAFLVAGAPLSFDYPIAG 261 Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312 +FN GGS V PEFMSL++ALS YTAAFIAEIVR+G+ VP+GQ EAA ALGL TR Sbjct: 262 KFNLTGGSVVGPEFMSLFLALSFYTAAFIAEIVRAGIRGVPKGQTEAAGALGLHPSSITR 321 Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372 LV++PQA R IIPPL+SQYLNL KNSSLA+A+GFADLV+VG T +NQTGQA+E+ILIWM Sbjct: 322 LVVIPQAFRIIIPPLSSQYLNLTKNSSLAIAIGFADLVAVGSTTLNQTGQAVEVILIWMV 381 Query: 373 IYLSLSIMIALFMNRLNAKIALKEK 397 +YLSLSI+ +L MN NAK+AL E+ Sbjct: 382 VYLSLSIVTSLLMNWFNAKMALVER 406 >gi|110633467|ref|YP_673675.1| polar amino acid ABC transporter, inner membrane subunit [Mesorhizobium sp. BNC1] gi|110284451|gb|ABG62510.1| general L-amino acid ABC transporter membrane protein [Chelativorans sp. BNC1] Length = 396 Score = 358 bits (919), Expect = 7e-97, Method: Compositional matrix adjust. Identities = 182/384 (47%), Positives = 264/384 (68%) Query: 14 SRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEID 73 R+ + + R + +Q +L + + W +NN NN+ ++N++ G FLS RAGF+I Sbjct: 13 ERIGLMRNPRTRGLIIQTVLIIAILAFAAWLINNTVNNLTRANIASGFDFLSARAGFDIG 72 Query: 74 QGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYV 133 Q + Y+++SSY A+LVG NT +A +G++ ATI+G ++G GRLS N LV + +YV Sbjct: 73 QVPIAYSANSSYGRALLVGITNTVIVAGAGIVLATIVGFVIGIGRLSRNYLVRGLSTIYV 132 Query: 134 EVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFS 193 E FRN+PPL+VI F Y VLSVLP+P ++ LPFG +L+NRGL P + A + + Sbjct: 133 ETFRNVPPLLVILFWYFGVLSVLPLPREALELPFGAYLSNRGLQMPAARFEPLAVWTLAA 192 Query: 194 FVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ 253 F LGI ++ +R ++ +TG+ +L+ LIFGLP +V + + F+ P + Sbjct: 193 FALGIAAAVLLSRRNKLRQMRTGERQSILWPVLGLIFGLPLIVFVVTGLPVSFEAPQATR 252 Query: 254 FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313 FN +GG + PEF+SL++ALS YTAAFIAEI+R+G++AV RGQ EAA ALGLT R++ RL Sbjct: 253 FNLVGGWQIRPEFLSLFLALSFYTAAFIAEIIRAGILAVSRGQTEAASALGLTRRQSLRL 312 Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI 373 V++PQA R +IPPLTSQYLNL KNSSL +AVG+ +LV+VG T++NQTGQ++E++ IWM + Sbjct: 313 VVVPQAFRVVIPPLTSQYLNLTKNSSLGLAVGYPELVAVGSTVLNQTGQSVEVVAIWMVV 372 Query: 374 YLSLSIMIALFMNRLNAKIALKEK 397 YL LS+ A FMN NA++AL E+ Sbjct: 373 YLGLSVATAAFMNWFNARVALVER 396 >gi|90419550|ref|ZP_01227460.1| amino acid ABC transporter, permease protein [Aurantimonas manganoxydans SI85-9A1] gi|90336487|gb|EAS50228.1| amino acid ABC transporter, permease protein [Aurantimonas manganoxydans SI85-9A1] Length = 396 Score = 347 bits (890), Expect = 2e-93, Method: Compositional matrix adjust. Identities = 185/391 (47%), Positives = 256/391 (65%) Query: 7 KTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSE 66 +V R FL + V +I +Q+ L + L + W V+N N+ +N++ G GFL+E Sbjct: 6 HSVPRQGGGASFLNNPTVRSIVIQVALVVGLALFTWWIVDNTARNLAAANIASGFGFLAE 65 Query: 67 RAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVA 126 RAGF+I Y+S+++Y AIL+G NT +A SG+I ATI+G LVG GRLS N LV Sbjct: 66 RAGFDIAITPFTYSSNATYGHAILIGIANTLVVAISGIILATIVGFLVGIGRLSRNFLVR 125 Query: 127 WICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTN 186 I VYVE FRNIPPL+VI F Y VLSVL P P G++L NRGL P + + Sbjct: 126 SISTVYVETFRNIPPLLVILFWYFGVLSVLSGPRGIDESPVGVYLTNRGLQIPAILFEPV 185 Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246 A + + +G ++ R S+ TG+ P+L+ + +I GLP LV +A Sbjct: 186 AWATLAALAVGTAATILYARRSKKHQMATGERRPVLWPAIGMIVGLPLLVFVATGIPATL 245 Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306 + P +FN GG + PEF++L++ALS YTAAF+AEIVR+G+++V +GQ EAA ALGLT Sbjct: 246 EFPTATRFNLAGGIQIRPEFIALWLALSIYTAAFVAEIVRAGILSVSKGQTEAASALGLT 305 Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 K RLV++PQA R IIPPLTSQYLNL KNSSL +A+G+ +LV+VG T++NQ+GQ+IE+ Sbjct: 306 RGKLLRLVVVPQAFRVIIPPLTSQYLNLTKNSSLGLAIGYPELVAVGSTVLNQSGQSIEV 365 Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 ++IWM +YL LSI ++L MN NAK+AL E+ Sbjct: 366 VVIWMTVYLGLSITVSLIMNWFNAKMALVER 396 >gi|114706425|ref|ZP_01439327.1| probable general l-amino acid transport permease abc transporter protein [Fulvimarina pelagi HTCC2506] gi|114538286|gb|EAU41408.1| probable general l-amino acid transport permease abc transporter protein [Fulvimarina pelagi HTCC2506] Length = 400 Score = 327 bits (839), Expect = 2e-87, Method: Compositional matrix adjust. Identities = 173/379 (45%), Positives = 246/379 (64%) Query: 19 LYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVP 78 L D + ++Q L + L + W V+N N+ ++N++ G GFLS RAGF+I Q + Sbjct: 22 LNDPFFRSFAIQATLIIGLALFVWWLVDNTARNLAQANIASGFGFLSNRAGFDIGQTPIE 81 Query: 79 YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138 Y++ ++Y A++VG VNT +A +G++ ATI+G ++G GRLS N LV + VYVEVFRN Sbjct: 82 YSNSATYGRALIVGLVNTLIVAGTGIVFATIVGFIIGIGRLSQNFLVRLLSTVYVEVFRN 141 Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198 IPPL+VI F Y V+S L P PFG +L NRGL P+ + A F G+ Sbjct: 142 IPPLLVILFWYFGVISALGSPRGISENPFGFYLTNRGLQTPSFAFEVLAWASFVVFAAGL 201 Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258 ++ R +R KTG P L+ L+ GLP + + D P G FN G Sbjct: 202 AAAIVLARRNRRHQLKTGDRKPTLWPVLGLVVGLPLVAFLVTGMPATIDIPTPGTFNLQG 261 Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G + PEF++L++ALS YTAAFIAEIVR+G+++V +GQ EA+ ALGL RLV++PQ Sbjct: 262 GFQIKPEFVALFLALSLYTAAFIAEIVRAGILSVSKGQTEASSALGLRRGLTLRLVIVPQ 321 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378 A R IIPPLTSQYLNL+KNSSL +A+G+ +L ++G T++NQ+GQ+IEII+I M +YLS+S Sbjct: 322 AFRVIIPPLTSQYLNLIKNSSLGLAIGYPELFAIGTTVLNQSGQSIEIIVICMGVYLSIS 381 Query: 379 IMIALFMNRLNAKIALKEK 397 I +++FMN N+K+AL E+ Sbjct: 382 IAVSIFMNWFNSKMALAER 400 >gi|163760314|ref|ZP_02167397.1| probable general l-amino acid transport permease abc transporter protein [Hoeflea phototrophica DFL-43] gi|162282713|gb|EDQ33001.1| probable general l-amino acid transport permease abc transporter protein [Hoeflea phototrophica DFL-43] Length = 402 Score = 320 bits (819), Expect = 3e-85, Method: Compositional matrix adjust. Identities = 170/390 (43%), Positives = 246/390 (63%), Gaps = 8/390 (2%) Query: 14 SRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEID 73 R+ + D +V + Q +L + + + ++N +N+ ++ +S G GF ERAGF+I Sbjct: 15 GRVSMMNDPKVRGLVFQGLLIIAVGAMVWSGISNAVDNLARAGISSGFGFFGERAGFDIG 74 Query: 74 QGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYV 133 Q +PYT+DS+Y A VG +NT +A G+ ATIIG +VG RLS N LV +YV Sbjct: 75 QAFIPYTNDSTYLRAFFVGLLNTMVVAIIGIFLATIIGFVVGLARLSKNYLVQKFATIYV 134 Query: 134 EVFRNIPPLVVIFFLYKSVLSVLPIP-----DHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188 EV RNIP L+ + F YK+VLS+LP P + + F +NNRGL P L + + Sbjct: 135 EVLRNIPLLLQLLFWYKAVLSILPSPRAAGLEAGAEVAFN--INNRGLYIPRLVPEDGSS 192 Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248 + ++F + ++ R ++ TG+ P+ ++ GLP + + + + Sbjct: 193 LIFYAFAIAVIAWFLIGRWAKKRQMATGQQFPVFLTGLAMVIGLPLVAFLVTGMPVSMEY 252 Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308 L FN +GG + PEFM+L + LS YTAAFIAEIVR+G++AV RGQ EAA ALGL Sbjct: 253 ASLQGFNMVGGWVIQPEFMALLLGLSLYTAAFIAEIVRAGILAVSRGQTEAAFALGLRPN 312 Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEII 367 +RLV++PQAMR IIPPLTSQ+LNL KNSSLAVA+G+ DLVS+ GGT++NQTGQA+E+I Sbjct: 313 LTSRLVIVPQAMRVIIPPLTSQFLNLTKNSSLAVAIGYPDLVSIFGGTVLNQTGQAVEVI 372 Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 I M +YL+LS++ + FMN N+++AL E+ Sbjct: 373 SITMLVYLTLSLLTSAFMNWFNSRVALVER 402 >gi|209966386|ref|YP_002299301.1| general L-amino acid transport system permease protein AapQ [Rhodospirillum centenum SW] gi|209959852|gb|ACJ00489.1| general L-amino acid transport system permease protein AapQ [Rhodospirillum centenum SW] Length = 396 Score = 313 bits (803), Expect = 3e-83, Method: Compositional matrix adjust. Identities = 175/392 (44%), Positives = 244/392 (62%), Gaps = 2/392 (0%) Query: 6 RKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLS 65 R R L D V + Q +ALLL ++ + V+N N+ + ++ G GFL Sbjct: 7 RDAAAPPVRRRLSLNDPFVRAVLWQAGVALLLGLVAWYLVSNTMENLARQAVATGYGFLD 66 Query: 66 ERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLV 125 AGF + + +PY+ +Y A LVG +NT +A G++ AT++G L+G RLS N LV Sbjct: 67 MPAGFHVGEAPIPYSPTDTYGRAFLVGILNTLKVAAIGIVLATVLGVLLGIARLSGNWLV 126 Query: 126 AWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDT 185 A + YVEV RN+P L+ +F Y + LP P ++ G+FL+NRGL P Sbjct: 127 AKLSAGYVEVVRNVPLLLQLFLWYGLLTEALPGPRQALEPVPGVFLSNRGLKLPAPGEGG 186 Query: 186 NAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH 245 ++ +++ + GI L++ + +R TG+ LP+ I T L+ GLP LVL+AL L Sbjct: 187 GWELALYALLAGIALTVALSFWNRRRQAATGRRLPMGTIGTGLVAGLPALVLLALGAPL- 245 Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305 D P L FNF GG+T++PE +L L YTAAFI EIVRSG++AVP+GQ EAA ALGL Sbjct: 246 -DVPELRGFNFAGGATLTPELSALLFGLVAYTAAFIGEIVRSGILAVPQGQTEAARALGL 304 Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365 + + RLV+LPQA+R I+PP TSQYLNL KNSSLAVA+G+ D VS+ T INQTGQA+E Sbjct: 305 SGGQTMRLVVLPQALRVIVPPTTSQYLNLTKNSSLAVAIGYPDFVSIVNTTINQTGQALE 364 Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 + M +YL++SI ++L MN NA+IALKE+ Sbjct: 365 GVAAVMAVYLTISIALSLLMNWYNARIALKER 396 >gi|126668364|ref|ZP_01739322.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Marinobacter sp. ELB17] gi|126627180|gb|EAZ97819.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Marinobacter sp. ELB17] Length = 396 Score = 313 bits (801), Expect = 4e-83, Method: Compositional matrix adjust. Identities = 171/367 (46%), Positives = 239/367 (65%), Gaps = 2/367 (0%) Query: 33 LALLLTVIFLWCV-NNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILV 91 LAL F W + +N +NME +S G GFL E +GF I ++PY S +Y V Sbjct: 30 LALATVFWFGWTLFHNTLSNMESRGISTGFGFLDETSGFGIIMSLIPYDSTMTYGRTFFV 89 Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151 G +NT ++ G++ ATIIG +VG RLS+N L+A + VY+E RNIP L+ IFF Y + Sbjct: 90 GLLNTLLVSAMGVVAATIIGFVVGVARLSSNWLIAKLALVYIETIRNIPLLLQIFFWYFA 149 Query: 152 VLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHF 211 VL LP P S+ + FL+NRGL FPT + + + + ++G+ ++F R ++ Sbjct: 150 VLQTLPSPRQSLDVADMFFLSNRGLYFPTASAEPGFGWVMAALIVGVAAAVFVHRWAKKR 209 Query: 212 HEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYI 271 +TG+ P L + LI LP L+ + + L ++ P L FNF GG+++ PE +L+I Sbjct: 210 QFRTGQLFPALRVGAVLILALPLLMFVLVGRPLVWEMPSLTGFNFTGGASILPELAALWI 269 Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 ALS YTA+FIAEIVRSG++AV RGQ EAA ALGL RLV++PQAMR IIPPLTSQY Sbjct: 270 ALSLYTASFIAEIVRSGILAVNRGQTEAASALGLRSSFTLRLVVIPQAMRVIIPPLTSQY 329 Query: 332 LNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 LNL+KNSSLA A+ + DLVSV GT +NQTGQA+E++ I M +YL++S++I+ MN N Sbjct: 330 LNLVKNSSLATAIAYPDLVSVFMGTTLNQTGQAVEVVAITMAVYLTISLIISGLMNIYNR 389 Query: 391 KIALKEK 397 +AL+E+ Sbjct: 390 AVALQER 396 >gi|83648449|ref|YP_436884.1| amino acid ABC transporter permease [Hahella chejuensis KCTC 2396] gi|83636492|gb|ABC32459.1| ABC-type amino acid transport system, permease component [Hahella chejuensis KCTC 2396] Length = 395 Score = 310 bits (794), Expect = 3e-82, Method: Compositional matrix adjust. Identities = 174/385 (45%), Positives = 241/385 (62%), Gaps = 1/385 (0%) Query: 14 SRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEID 73 ++ K D V ++ Q++ + FL+ +NN NME+ ++ G FL ++AGF I Sbjct: 11 AKTKIWNDPAVRSVFFQVLAVGAVVAFFLYIINNALTNMEQRGITTGFAFLGDQAGFGIL 70 Query: 74 QGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYV 133 Q ++ Y S+ VG +NT +A G+I ATI+G +G GRLS N L++ + Y+ Sbjct: 71 QSLIEYDETHSFGRTFFVGLLNTVLVAVLGIILATILGFFIGIGRLSHNWLISKLATTYI 130 Query: 134 EVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFS 193 E FRNIP L+ IFF Y +VL LP P +S+ + +F N RGL P + F+ Sbjct: 131 ETFRNIPLLLQIFFWYFAVLQGLPSPRNSMSIGESVFFNIRGLYLPGPVYEDGFGAVAFA 190 Query: 194 FVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ 253 V+ I + + R R +TGK PL S ++ GLP +V +H+D PVL Sbjct: 191 IVVAIGIIIGLVRFERKRQRETGKTFPLFLPSVGILCGLPLIVYFLAGSPMHWDYPVLTG 250 Query: 254 FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313 FNF GG T+ PE ++L IAL+ YTAAFIAE+VRSG+ A+PRGQ EAA ALGL++ + RL Sbjct: 251 FNFKGGLTIIPELIALLIALTVYTAAFIAEVVRSGIEAIPRGQSEAANALGLSNGQRLRL 310 Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMF 372 V++PQAMR IIPP+T+QYLNL KNSSLA A+G+ DLVSV GT +NQTGQAIEII + M Sbjct: 311 VIIPQAMRVIIPPMTNQYLNLTKNSSLATAIGYPDLVSVFMGTTLNQTGQAIEIIFMTMA 370 Query: 373 IYLSLSIMIALFMNRLNAKIALKEK 397 +YL LS+ + MN N++IAL E+ Sbjct: 371 VYLFLSLSTSALMNWYNSRIALVER 395 >gi|237807992|ref|YP_002892432.1| polar amino acid ABC transporter, inner membrane subunit [Tolumonas auensis DSM 9187] gi|237500253|gb|ACQ92846.1| polar amino acid ABC transporter, inner membrane subunit [Tolumonas auensis DSM 9187] Length = 397 Score = 309 bits (791), Expect = 6e-82, Method: Compositional matrix adjust. Identities = 170/382 (44%), Positives = 243/382 (63%), Gaps = 1/382 (0%) Query: 17 KFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGI 76 +++YD +V I Q I + + + ++N +NME ++ G FL RA F I Q + Sbjct: 16 RWIYDPKVRGIIFQSIAVACVAWMLFYFISNALHNMESRGIATGFSFLDNRASFGIAQSL 75 Query: 77 VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136 + Y+ + +Y A ++G +NT ++ G+I AT+ G L+G RLS N L++ VY+E F Sbjct: 76 ISYSENDTYGRAFIIGLLNTLLVSGIGIIFATVFGFLIGIARLSNNWLLSRAAAVYIETF 135 Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196 RNIP L+ IFF Y VL LP P SI L FLN RGL P ++ +F+L Sbjct: 136 RNIPLLLQIFFWYFCVLRALPGPRDSINLLDAFFLNVRGLYVPAPVTESGFTAVTVAFIL 195 Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256 IV +F + +++ TG+ P+ + S L+FGLP +V + +H++ P L FNF Sbjct: 196 AIVACVFLKKWAKNRQNLTGQPFPVFFSSLGLLFGLPLVVFLIAGMPMHWELPALKGFNF 255 Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316 GG TV PE S+ +AL+ +TAA IAEIVRSG++AV +GQ+EAA ALGL + R +++ Sbjct: 256 RGGLTVIPELFSMVVALTIFTAASIAEIVRSGIMAVSKGQVEAADALGLKNGLTLRFIII 315 Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYL 375 PQAMR IIPPLTSQYLNL+KNSSLA AVG+ DLVSV G+ +NQTGQA+EII + M +YL Sbjct: 316 PQAMRVIIPPLTSQYLNLVKNSSLATAVGYPDLVSVFMGSTLNQTGQAVEIIAMTMAVYL 375 Query: 376 SLSIMIALFMNRLNAKIALKEK 397 ++S++ ++ MN NAK AL E+ Sbjct: 376 TISLITSVLMNIYNAKKALVER 397 >gi|298291388|ref|YP_003693327.1| polar amino acid ABC transporter inner membrane protein [Starkeya novella DSM 506] gi|296927899|gb|ADH88708.1| polar amino acid ABC transporter, inner membrane subunit [Starkeya novella DSM 506] Length = 398 Score = 308 bits (790), Expect = 7e-82, Method: Compositional matrix adjust. Identities = 173/382 (45%), Positives = 244/382 (63%), Gaps = 1/382 (0%) Query: 17 KFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGI 76 F+ D +V +I +Q++ +L+ ++ N +N+ ++ G GFL AGF I Q + Sbjct: 17 SFINDPKVRSIGLQLVALILVILLGWMFAENARDNLAAQKIATGFGFLDNTAGFGISQTL 76 Query: 77 VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136 +PY+ S+Y A LVG +NT +A G+ ATIIG LVG GRLS N +V I YVEV Sbjct: 77 IPYSETSTYGRAFLVGLLNTILVAVVGIFLATIIGFLVGIGRLSKNFVVRLISTTYVEVL 136 Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196 RN+PPL I F Y +VLS +P P SI + +F++NRGL P + +++F Sbjct: 137 RNLPPLFQILFWYLAVLSAMPSPRQSISVFGEVFISNRGLIIPRPLFGEGTGLVLWAFGA 196 Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256 ++ + +R E+TG+ P+L++ ++ +P +I + + F++P L FNF Sbjct: 197 ALLAVILIGYWARGRREETGQRFPMLWVGLGILVLVPLAAMIYTGFPITFERPELKGFNF 256 Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316 GG V PEF++L +AL+ YTAAFIAE VRSG++AV GQ EAA +LGL + + RLV++ Sbjct: 257 AGGVRVIPEFVALTVALATYTAAFIAENVRSGIMAVSHGQTEAAHSLGLRNGQTLRLVVI 316 Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYL 375 PQAMR IIPPLT+QYLNL KNSSLAV +G+ DLV+V GT +NQTGQAIEII I M +YL Sbjct: 317 PQAMRVIIPPLTNQYLNLTKNSSLAVGIGYPDLVAVFAGTSLNQTGQAIEIIAITMGVYL 376 Query: 376 SLSIMIALFMNRLNAKIALKEK 397 LSI+ +L MN N +IAL E+ Sbjct: 377 VLSILTSLIMNAYNKRIALVER 398 >gi|59712140|ref|YP_204916.1| amino-acid transporter permease [Vibrio fischeri ES114] gi|59480241|gb|AAW86028.1| predicted amino-acid transporter permease [Vibrio fischeri ES114] Length = 388 Score = 306 bits (784), Expect = 3e-81, Method: Compositional matrix adjust. Identities = 175/380 (46%), Positives = 241/380 (63%), Gaps = 1/380 (0%) Query: 19 LYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVP 78 LY+ I Q+I L F VNN +N+E ++ G+GFL + AGF I +V Sbjct: 9 LYNPTFRAILFQVIAVAALVFFFYTIVNNALSNLESRGIATGLGFLDQEAGFGIGLSLVE 68 Query: 79 YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138 Y SY +VG +NT ++ G++ AT++G +G RLS+N LV+ VY+E FRN Sbjct: 69 YDETYSYGRTFVVGLLNTALVSVLGILFATVLGFTIGIARLSSNWLVSRCAAVYIETFRN 128 Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198 IP L+ IFF Y +VL LP P S+ L +FLN RGL FP+ + + + +F+ I Sbjct: 129 IPLLLQIFFWYFAVLQALPSPRQSLSLGESVFLNVRGLFFPSPIFEEGSNLIGIAFIAAI 188 Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258 V LF ++ +++ TG+ P+L S +FGLPTL + + P L FNF G Sbjct: 189 VFILFLSKWAKNKQRITGQQTPVLRYSLLALFGLPTLAYFISGMPISIEYPELKGFNFRG 248 Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G ++ PE +L +ALS YTA+FIAEIVRSG+ AV GQ EAA+ALGL ++ +LV++PQ Sbjct: 249 GISIIPELAALVVALSVYTASFIAEIVRSGINAVSHGQTEAAMALGLPRKRTLKLVVIPQ 308 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSL 377 AMR IIPPLTSQYLNL KNSSLA+A+G+ DLVSV GT +NQTGQAIEII + M +YL+L Sbjct: 309 AMRIIIPPLTSQYLNLTKNSSLAMAIGYPDLVSVFAGTTLNQTGQAIEIITMTMAVYLTL 368 Query: 378 SIMIALFMNRLNAKIALKEK 397 S++ + MN N+K+AL E+ Sbjct: 369 SLLTSFLMNIYNSKVALVER 388 >gi|27365995|ref|NP_761523.1| amino acid ABC transporter permease [Vibrio vulnificus CMCP6] gi|320156510|ref|YP_004188889.1| amino acid ABC transporterpermease [Vibrio vulnificus MO6-24/O] gi|27362195|gb|AAO11050.1| Amino acid ABC transporter, permease protein [Vibrio vulnificus CMCP6] gi|319931822|gb|ADV86686.1| amino acid ABC transporter, permease protein [Vibrio vulnificus MO6-24/O] Length = 401 Score = 305 bits (782), Expect = 6e-81, Method: Compositional matrix adjust. Identities = 174/397 (43%), Positives = 244/397 (61%), Gaps = 2/397 (0%) Query: 3 KNARKTVT-RYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGI 61 KN V+ + S LY+ ++ Q+I L L F VNN N+ ++ G Sbjct: 5 KNTSSGVSAKPSSSTNLLYNPTFRSVVFQVIAILALVFFFYTIVNNALTNLNARGIATGF 64 Query: 62 GFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSA 121 FLS+ AGF I ++ Y SY ++G +NT ++F G+I AT++G ++G RLS+ Sbjct: 65 DFLSQEAGFGIGLTLIEYDETFSYGRTFVIGLLNTALVSFLGIILATVLGFVIGIARLSS 124 Query: 122 NKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTL 181 N LV+ +Y+E+FRNIP L+ IFF Y +VL LP P SI L +FLN RGL FP Sbjct: 125 NWLVSRFAAIYIEIFRNIPLLLQIFFWYFAVLQALPSPRQSISLGEAIFLNVRGLFFPKP 184 Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALK 241 + + + GI+ ++F +R+ + TG+ P+ I+ LI GLP LV Sbjct: 185 VFEAGSAFIFAALFAGIIATIFIGVWARNKQKLTGQQTPMGRIALALIVGLPALVYFVSG 244 Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301 + + P L FN+ GG ++ PE +L +ALS YTAAFIAEIVRSG+ AV GQ EAA+ Sbjct: 245 MPVSAEYPALKGFNYQGGISIIPELAALLVALSIYTAAFIAEIVRSGINAVSHGQTEAAM 304 Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQT 360 +LGL + +L+++PQA+R IIPPLTSQYLNL KNSSLA+A+G+ DLVSV GT +NQT Sbjct: 305 SLGLPRTRTLKLIIIPQALRIIIPPLTSQYLNLTKNSSLAMAIGYPDLVSVFAGTTLNQT 364 Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 GQAIEII + M +YL+LS++ + MN N K+AL E+ Sbjct: 365 GQAIEIIAMTMGVYLTLSLVTSALMNIYNKKVALVER 401 >gi|37679740|ref|NP_934349.1| ABC-type amino acid transport system, permease component [Vibrio vulnificus YJ016] gi|37198485|dbj|BAC94320.1| ABC-type amino acid transport system, permease component [Vibrio vulnificus YJ016] Length = 401 Score = 305 bits (781), Expect = 8e-81, Method: Compositional matrix adjust. Identities = 174/397 (43%), Positives = 244/397 (61%), Gaps = 2/397 (0%) Query: 3 KNARKTVT-RYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGI 61 KN V+ + S LY+ ++ Q+I L L F VNN N+ ++ G Sbjct: 5 KNTSSGVSAKPSSSTNLLYNPTFRSVVFQVIAILALVFFFYTIVNNALTNLNARGIATGF 64 Query: 62 GFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSA 121 FLS+ AGF I ++ Y SY ++G +NT ++F G+I AT++G ++G RLS+ Sbjct: 65 DFLSQEAGFGIGLTLIEYDETFSYGRTFVIGLLNTALVSFLGIILATVLGFVIGIARLSS 124 Query: 122 NKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTL 181 N LV+ +Y+E+FRNIP L+ IFF Y +VL LP P SI L +FLN RGL FP Sbjct: 125 NWLVSRFAAIYIEIFRNIPLLLQIFFWYFAVLQALPSPRQSISLGEAIFLNVRGLFFPKP 184 Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALK 241 + + + GI+ ++F +R+ + TG+ P+ I+ LI GLP LV Sbjct: 185 IFEAGSAFIFAALFAGIIATIFIGVWARNKQKLTGQQTPMGRIALALIVGLPALVYFVSG 244 Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301 + + P L FN+ GG ++ PE +L +ALS YTAAFIAEIVRSG+ AV GQ EAA+ Sbjct: 245 MPVSAEYPALKGFNYQGGISIIPELAALLVALSIYTAAFIAEIVRSGINAVSHGQTEAAM 304 Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQT 360 +LGL + +L+++PQA+R IIPPLTSQYLNL KNSSLA+A+G+ DLVSV GT +NQT Sbjct: 305 SLGLPRTRTLKLIIIPQALRIIIPPLTSQYLNLTKNSSLAMAIGYPDLVSVFAGTTLNQT 364 Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 GQAIEII + M +YL+LS++ + MN N K+AL E+ Sbjct: 365 GQAIEIIAMTMGVYLTLSLVTSALMNIYNKKVALVER 401 >gi|224367656|ref|YP_002601819.1| AapQ [Desulfobacterium autotrophicum HRM2] gi|223690372|gb|ACN13655.1| AapQ [Desulfobacterium autotrophicum HRM2] Length = 390 Score = 304 bits (778), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 166/385 (43%), Positives = 242/385 (62%), Gaps = 2/385 (0%) Query: 14 SRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEID 73 ++ F D +I Q + + + ++ + V+N N+E+ ++S G GF A FEI Sbjct: 7 EKIPFFRDPEKLSILYQFLSIVAVGLVSYYLVSNTLANLERQSISTGFGFFEREASFEIG 66 Query: 74 QGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYV 133 + ++ Y++ SY A+ VGF+NT ++F G+I I+GT++G RLS+N LV+ + +Y+ Sbjct: 67 ESLIKYSAADSYGRALAVGFLNTLIVSFIGIILTVILGTILGIARLSSNWLVSRLSAIYI 126 Query: 134 EVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPF-GMFLNNRGLSFPTLTMDTNAKIFVF 192 EVF++IP L+ +FF Y +LP P ++ PF G+FL NRGL F K Sbjct: 127 EVFQDIPILLQLFFWYAFFYEMLPSPRQALN-PFSGLFLCNRGLVFGIPEWHPAFKFMAA 185 Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252 + VLGIV++L R ++ E+TG+ P+L +S LI GLP +V + + P L Sbjct: 186 ALVLGIVIALVLKRWAKARQERTGQIFPILKVSALLIIGLPLVVWLMTGMPTRMNVPTLQ 245 Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312 FNF GG ++SPEF +L + L YTAAF+AE+VR+G+ +V +GQ EAA+++GL Sbjct: 246 GFNFKGGLSISPEFTALLLGLVLYTAAFVAEVVRAGIQSVSKGQTEAALSIGLKPTHVLN 305 Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372 LV+LPQA+R IIPPLTSQ LNL KNSSLAVA+G+ D VSV GT INQTGQAIE + + M Sbjct: 306 LVILPQALRVIIPPLTSQLLNLTKNSSLAVAIGYPDFVSVAGTTINQTGQAIEGVAMIMI 365 Query: 373 IYLSLSIMIALFMNRLNAKIALKEK 397 +YL S+ + FMN N +IAL E+ Sbjct: 366 VYLVFSLSTSAFMNWYNKRIALVER 390 >gi|149376723|ref|ZP_01894481.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Marinobacter algicola DG893] gi|149358962|gb|EDM47428.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Marinobacter algicola DG893] Length = 395 Score = 303 bits (777), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 175/385 (45%), Positives = 243/385 (63%), Gaps = 7/385 (1%) Query: 17 KFLYDMRVHNISVQIILALLLTVIFLWC-VNNVYNNMEKSNLSLGIGFLSERAGFEIDQG 75 K YD RV I Q++ A+ L W ++N +NME +S G GFL E AGF I Sbjct: 14 KPWYDPRVRAIFFQVV-AIALVFWGGWVLIDNTLSNMESRGISTGFGFLDESAGFGIIMS 72 Query: 76 IVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEV 135 +VPY + SY VG NT ++ G++ ATI+G ++G RLS+N LVA + Y+EV Sbjct: 73 LVPYDATMSYGRTFWVGLTNTLLVSAMGVVTATILGFIIGVARLSSNWLVAKVSLAYIEV 132 Query: 136 FRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPT-LTMDTNAKIFVFSF 194 RNIP L+ IFF Y +VLS LP P S+ + FLNNRGL P +T D V+ Sbjct: 133 IRNIPLLLQIFFWYFAVLSSLPSPRQSVDVGGAFFLNNRGLYVPEPVTQDGFG--LVWGG 190 Query: 195 VLGIVLSLFATRL-SRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ 253 +L + ++ R+ ++ TG P + ++F +P + L +D P L Sbjct: 191 ILAAIAAVIGIRIWAKRRQLATGAIFPTFKVGVGILFLVPIMSYFLAGQPLEWDLPALKG 250 Query: 254 FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313 FNF GG ++ PE +L+IALS YTA+FIAEIVRSG+++V +GQ EA+ ALGL + RL Sbjct: 251 FNFGGGISIIPELAALWIALSLYTASFIAEIVRSGILSVSKGQTEASKALGLPNGLTLRL 310 Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMF 372 V++PQAMR IIPPLTSQYLNL+KNSSLA A+G+ DLV+V GT +NQTGQA+E++ I M Sbjct: 311 VVIPQAMRVIIPPLTSQYLNLVKNSSLATAIGYPDLVAVFMGTTLNQTGQAVEVVAITMA 370 Query: 373 IYLSLSIMIALFMNRLNAKIALKEK 397 +YL++S++I+LFMN N +A+KE+ Sbjct: 371 VYLTISLLISLFMNIYNRAVAIKER 395 >gi|307942365|ref|ZP_07657716.1| general L-amino acid transport system permease protein AapQ [Roseibium sp. TrichSKD4] gi|307774651|gb|EFO33861.1| general L-amino acid transport system permease protein AapQ [Roseibium sp. TrichSKD4] Length = 392 Score = 303 bits (777), Expect = 3e-80, Method: Compositional matrix adjust. Identities = 169/383 (44%), Positives = 234/383 (61%) Query: 15 RMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQ 74 R L D +V + Q++L L + V+N N+E+ N+S G FL AGF I Q Sbjct: 10 RASLLNDPKVRGLFYQVLLVAFLVAGGWFIVSNTAANLERQNISSGFDFLKNTAGFGISQ 69 Query: 75 GIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVE 134 + Y+ SSY AI++GF+NT +A G+ ATIIG +VG RLS N +++ + YVE Sbjct: 70 TPIEYSETSSYGRAIVIGFLNTLLVAVFGIFFATIIGFVVGISRLSTNWVISKLAYWYVE 129 Query: 135 VFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSF 194 + RN+P L+ I F Y ++ P P S+ L G LNNRG P A + + Sbjct: 130 IVRNVPLLLQILFWYLLLIESTPSPRKSVELGAGAVLNNRGFFLPKPIWGDVAVYSLAAL 189 Query: 195 VLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQF 254 ++GI+ + +R E TG+ P+ + I G P LV + + F+ PVL F Sbjct: 190 IIGIIATFVIRSWARKRQELTGQQFPVGLTALGAIIGFPLLVFLITGLPVQFEYPVLKGF 249 Query: 255 NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLV 314 N++GG + PEF++L ALS YTAAFIAEIVR+G+ AV GQ EAA ALGL + RLV Sbjct: 250 NYVGGQRLIPEFLALLFALSIYTAAFIAEIVRAGIQAVSHGQTEAAHALGLRNSPTLRLV 309 Query: 315 LLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374 ++PQAMR +IPP+TSQYLNL KNSSLAVA+ F DLV+ G ++NQ+G+AIEI+ IWM +Y Sbjct: 310 VIPQAMRVMIPPMTSQYLNLTKNSSLAVAIAFPDLVANGQIVMNQSGRAIEIVGIWMVVY 369 Query: 375 LSLSIMIALFMNRLNAKIALKEK 397 LSLS+ + FMN N ++AL E+ Sbjct: 370 LSLSLGTSAFMNWYNKRMALVER 392 >gi|311695086|gb|ADP97959.1| amino acid ABC transporter, permease protein [marine bacterium HP15] Length = 395 Score = 303 bits (775), Expect = 4e-80, Method: Compositional matrix adjust. Identities = 175/394 (44%), Positives = 244/394 (61%), Gaps = 3/394 (0%) Query: 6 RKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWC-VNNVYNNMEKSNLSLGIGFL 64 ++T+ + K YD RV ++ Q + A+ L W V+N +NME +S G GFL Sbjct: 3 KQTIDTRPAGPKPWYDPRVRSLFFQAV-AIALVFWGGWILVDNTLSNMESRGISTGFGFL 61 Query: 65 SERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKL 124 E AGF I +VPY + SY VG NT ++ G++ ATI+G ++G RLS+N L Sbjct: 62 GETAGFGIIMNLVPYDATMSYGRTFWVGLTNTLLVSAMGVVAATILGFIIGVARLSSNWL 121 Query: 125 VAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMD 184 VA + VY+EV RNIP L+ IFF Y +VLS LP P S+ + +FLNNRGL P Sbjct: 122 VAKMALVYIEVIRNIPLLLQIFFWYFAVLSNLPSPRQSVDVGGALFLNNRGLYLPDPVTQ 181 Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244 I +L I + ++ TG+ P + ++ +P + + L Sbjct: 182 EGFGIVWGGILLAIAAVVGIRIWAKKRQLATGQIFPTFKVGVAILVLVPIISYLVAGRPL 241 Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304 +D P L FNF GG T+ PE +L+IALS YTA+FIAEIVRSG+++V +GQ EA+ ALG Sbjct: 242 EWDLPALRGFNFGGGITIIPELAALWIALSLYTASFIAEIVRSGILSVSKGQTEASKALG 301 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQA 363 L + RLV++PQAMR IIPPLTSQYLNL+KNSSLA A+G+ DLV+V GT +NQTGQA Sbjct: 302 LPNGLTLRLVVIPQAMRVIIPPLTSQYLNLVKNSSLATAIGYPDLVAVFMGTTLNQTGQA 361 Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 +E++ I M +YL++S++I+LFMN N +A+KE+ Sbjct: 362 VEVVAITMAVYLTISLLISLFMNIYNRAVAIKER 395 >gi|323498374|ref|ZP_08103374.1| amino acid ABC transporter, permease protein [Vibrio sinaloensis DSM 21326] gi|323316616|gb|EGA69627.1| amino acid ABC transporter, permease protein [Vibrio sinaloensis DSM 21326] Length = 401 Score = 303 bits (775), Expect = 4e-80, Method: Compositional matrix adjust. Identities = 177/394 (44%), Positives = 244/394 (61%), Gaps = 1/394 (0%) Query: 5 ARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFL 64 A KT R S +Y+ ++ Q I L F VNN +N+E ++ G GFL Sbjct: 8 ASKTDNRPSSGASLIYNPTFRSVVFQAIAICALFFFFYTIVNNALSNLEARGIATGFGFL 67 Query: 65 SERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKL 124 + AGF I ++ Y SY LVG +NT ++F G+I AT++G ++G RLS N L Sbjct: 68 DQEAGFGIGLTLIEYDETYSYGRTFLVGLLNTALVSFLGIILATVVGFVMGIARLSNNWL 127 Query: 125 VAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMD 184 V+ + VY+E+FRN+P L+ IFF Y +VL LP S+ L +FLN RGL FP + Sbjct: 128 VSRLAAVYIEIFRNVPLLLQIFFWYFAVLQALPSARQSLSLGEAIFLNVRGLYFPAPVFE 187 Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244 + + + S VLGIV S+F +R+ TG+ P+ I L+ LP +V + + Sbjct: 188 AGSGVVIASLVLGIVASVFVGVWARNKQRLTGQQTPMGRIIFGLVVALPVVVYFVMGSPI 247 Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304 + P L FNF GG ++ PE +L +ALS YTA+FIAEIVRSG+ AV GQ EAA++LG Sbjct: 248 SAEYPELKGFNFRGGVSIIPELAALLLALSIYTASFIAEIVRSGINAVSHGQTEAAMSLG 307 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQA 363 L + +LV++PQA+R IIPPLTSQYLNL KNSSLA+A+G+ DLVSV GT +NQTGQA Sbjct: 308 LPKSRTLKLVIIPQALRIIIPPLTSQYLNLTKNSSLAMAIGYPDLVSVFAGTTLNQTGQA 367 Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 IEII + M +YL+LS++ + MN N K+AL E+ Sbjct: 368 IEIIAMTMAVYLTLSLVTSALMNIYNRKVALVER 401 >gi|163854808|ref|YP_001629106.1| putative amino acid ABC transporter permease protein [Bordetella petrii DSM 12804] gi|163258536|emb|CAP40835.1| putative amino acid ABC transporter permease protein [Bordetella petrii] Length = 396 Score = 301 bits (772), Expect = 9e-80, Method: Compositional matrix adjust. Identities = 166/353 (47%), Positives = 225/353 (63%), Gaps = 1/353 (0%) Query: 45 VNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGM 104 V+N +N++ N+S G GF+ AGF I + + YT ++Y AI+VG +NT A G+ Sbjct: 45 VSNTLHNLQVRNISTGFGFIDREAGFAIGETPIDYTPANTYGRAIVVGLLNTLRAAVLGI 104 Query: 105 IPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIV 164 I AT++GTL+G GRLS N L+A +C VYVE RN+P L+ +FF Y + +P P + Sbjct: 105 ILATLLGTLIGVGRLSKNWLMAKVCSVYVETMRNVPLLLQLFFWYALITENMPGPRQAAN 164 Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224 G+F++NRGL P L + + L I+ ++ A + E TG+ PL + Sbjct: 165 PLPGVFISNRGLKVPALE-GASLDFILGGLALAIIGTIVAAHWGKKRQEATGQVFPLGRV 223 Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284 + L GLP L + L D P L FNF GG T+SPEF +L L YT+AFIAE+ Sbjct: 224 ALGLFIGLPILGWLVSGASLKLDMPELKGFNFSGGLTLSPEFAALLAGLVIYTSAFIAEV 283 Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344 VRSG+ AV +GQ EAA +LGL + RLV+LPQA+R IIPP+TSQYLNL KNSSLAVA+ Sbjct: 284 VRSGIQAVNQGQWEAAGSLGLRRSRVLRLVILPQALRVIIPPMTSQYLNLTKNSSLAVAI 343 Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 G+ D+VSV T +NQTGQAIE ILI M YL++S+ I++FMN N +IAL E+ Sbjct: 344 GYPDIVSVVNTTMNQTGQAIEGILIIMAAYLTVSLSISVFMNWYNKRIALVER 396 >gi|254503703|ref|ZP_05115854.1| ABC transporter, permease protein, putative [Labrenzia alexandrii DFL-11] gi|222439774|gb|EEE46453.1| ABC transporter, permease protein, putative [Labrenzia alexandrii DFL-11] Length = 401 Score = 301 bits (771), Expect = 1e-79, Method: Compositional matrix adjust. Identities = 173/392 (44%), Positives = 235/392 (59%), Gaps = 8/392 (2%) Query: 14 SRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEID 73 +R + D +V + Q +L L + V N N+E+ N++ G GF+ AGF I Sbjct: 10 ARASLVNDPKVRGLFYQALLIAALIFFGYFIVTNTVANLERQNIASGWGFVENTAGFGII 69 Query: 74 QGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYV 133 Q +VPY SSY AI VGF+NT +A G+ ATIIG +VG RLS N ++ I YV Sbjct: 70 QSLVPYAETSSYGQAIFVGFLNTLMVAVVGIFFATIIGFVVGIARLSNNWVINQIAYCYV 129 Query: 134 EVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFS 193 E+ RN+P L+ IFF Y +VL +P L LN GL P + + + Sbjct: 130 ELVRNVPLLLQIFFWYFAVLRAVPGKREKWSLFDTFHLNIAGLRMPKPIWEDGSGFIGIA 189 Query: 194 FVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ 253 ++GIV S+ +R +R ++TG+ P+ + + LI GLP + ++ + P + Sbjct: 190 LIIGIVASVVVSRWARKRQDETGQQFPVFWTALGLIIGLPVITYFVTGMPMYLEHPNYVE 249 Query: 254 --------FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305 F G + PEF++L AL+ YTAAFIAEIVR+G+ AV GQ EA+ ALGL Sbjct: 250 TGPILRRGFELGVGFNLIPEFLALTTALAIYTAAFIAEIVRAGIQAVSHGQTEASHALGL 309 Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365 + RLV++PQAMR IIPPLTSQYLNL KNSSLAVA+ F DLVSVGGT++NQTGQAIE Sbjct: 310 RNGPTLRLVVIPQAMRVIIPPLTSQYLNLTKNSSLAVAIAFPDLVSVGGTVLNQTGQAIE 369 Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 II IWM +YLSLS++ + FMN N ++AL E+ Sbjct: 370 IIAIWMAVYLSLSLITSAFMNWYNQRMALVER 401 >gi|311109073|ref|YP_003981926.1| general L-amino acid transporter permease AapQ [Achromobacter xylosoxidans A8] gi|310763762|gb|ADP19211.1| general L-amino acid transport system permease protein AapQ [Achromobacter xylosoxidans A8] Length = 370 Score = 300 bits (768), Expect = 3e-79, Method: Compositional matrix adjust. Identities = 170/353 (48%), Positives = 226/353 (64%), Gaps = 1/353 (0%) Query: 45 VNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGM 104 V+N +N+ N++ G GFL AGF I + + Y+ +Y AILVG +NT +A G+ Sbjct: 19 VSNTLHNLSVRNIATGFGFLQREAGFAIGETPIAYSPSDTYGHAILVGLLNTLRVAVIGI 78 Query: 105 IPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIV 164 + ATI+GTL+G GRLS N LVA I VYVEV RN+P L+ +FF Y + +P P + Sbjct: 79 VLATILGTLIGIGRLSKNWLVAKITSVYVEVMRNVPLLLQLFFWYALITENMPGPRQAHN 138 Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224 G+F++NRGL P L ++ + L IV +F + E TG+ PL Sbjct: 139 PLPGVFISNRGLKVPGLEGNS-LDWMLGGLGLAIVAIIFLGHWGKKRQEATGRVFPLGRA 197 Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284 + L+ GLP + +A L D PVL FNF GG T+SPEF +L L YT+AFIAE+ Sbjct: 198 AIGLLIGLPIVGWLASGASLTLDMPVLKGFNFSGGLTLSPEFAALMAGLVVYTSAFIAEV 257 Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344 VRSG+ AV GQ EAA +LGL ++ RLV+LPQA+R IIPP+TSQYLNL KNSSLAVA+ Sbjct: 258 VRSGIQAVNTGQWEAAGSLGLRRKQVLRLVVLPQALRVIIPPMTSQYLNLTKNSSLAVAI 317 Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 G+ D+VSV T +NQTGQAIE ILI M YL++S+ I++FMN N +IAL E+ Sbjct: 318 GYPDIVSVVNTTLNQTGQAIEGILIIMGAYLTVSLSISIFMNWYNKRIALVER 370 >gi|328543625|ref|YP_004303734.1| ABC transporter, permease protein, putative [Polymorphum gilvum SL003B-26A1] gi|326413369|gb|ADZ70432.1| ABC transporter, permease protein, putative [Polymorphum gilvum SL003B-26A1] Length = 395 Score = 300 bits (768), Expect = 3e-79, Method: Compositional matrix adjust. Identities = 172/393 (43%), Positives = 240/393 (61%), Gaps = 9/393 (2%) Query: 14 SRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEID 73 +R + D +V + Q++L +L + V+N +N+ + N++ G GFL AGF I Sbjct: 3 ARASLVNDPKVRGLFYQVLLIAVLVFVGWSIVSNTIDNLARQNIASGFGFLGNTAGFGII 62 Query: 74 QGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYV 133 Q +VPY SSY A++VGF NT +A G++ AT++G +VG RLS N +++ + YV Sbjct: 63 QALVPYAETSSYGQALVVGFFNTLLVAVIGIVFATVLGFVVGIARLSNNWVISRLAYAYV 122 Query: 134 EVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFG-MFLNNRGLSFPTLTMDTNAKIFVF 192 E+ RNIP L+ IFF Y +VL +P F + LN GL P ++ + Sbjct: 123 ELIRNIPLLLQIFFWYFAVLRAVPDKRDRWSFLFDTVHLNIAGLWLPRPELEPGSSAVGV 182 Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252 + ++G+ ++ +R E TGK P++ + LI GLP +V +A LH PV Sbjct: 183 ALLVGVAAAIAMRIWARRRQEATGKQFPVILTALGLIVGLPLVVFLAAGMPLHLSHPVFV 242 Query: 253 Q--------FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304 + F G + PE ++L +ALS YTA+FIAEIVR+G+ AV GQ EAA ALG Sbjct: 243 EEGPILRRGFTLGSGMNLIPELLALTLALSIYTASFIAEIVRAGIQAVSHGQTEAAHALG 302 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364 L + + RLV++PQAMR IIPPLTSQ+LNL KNSSLAVAV F DLVSVGG ++NQTGQAI Sbjct: 303 LRNGQTLRLVVIPQAMRVIIPPLTSQFLNLTKNSSLAVAVAFPDLVSVGGIVLNQTGQAI 362 Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 EII IWM +YLSLS+ + FMN N ++AL E+ Sbjct: 363 EIIAIWMIVYLSLSLATSAFMNWYNRRMALVER 395 >gi|92112256|ref|YP_572184.1| amino acid ABC transporter permease [Chromohalobacter salexigens DSM 3043] gi|91795346|gb|ABE57485.1| amino acid ABC transporter membrane protein 1, PAAT family [Chromohalobacter salexigens DSM 3043] Length = 392 Score = 299 bits (765), Expect = 6e-79, Method: Compositional matrix adjust. Identities = 164/354 (46%), Positives = 228/354 (64%), Gaps = 1/354 (0%) Query: 45 VNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGM 104 V N N+E ++ G GFL ERAGF I Q ++ ++ DS+Y LVG +NT ++ G+ Sbjct: 39 VGNTMANLEARGITTGFGFLDERAGFSIPQTLIEFSGDSTYGRTFLVGLLNTLLVSAMGI 98 Query: 105 IPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIV 164 + ATIIG VG RLS N L+A + YVE+FRNIP LV I F Y +VL LP P S+ Sbjct: 99 VAATIIGFAVGIARLSPNWLLARLAGAYVEIFRNIPLLVQILFWYFAVLQALPSPRDSLS 158 Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224 L +F+N RGL P + ++ ++GIV ++ ++ +TG+ALP+ ++ Sbjct: 159 LMEVVFINVRGLVIPDPQPLSGFAATPWALLVGIVAAIALGIYAKRRQARTGQALPIYWL 218 Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284 LI G P V + L + P L FNF GG TV PE +L++ALS YTA+FIAEI Sbjct: 219 GAGLIIGTPLAVFLLTGAPLEWSIPELKGFNFSGGVTVIPELAALWLALSIYTASFIAEI 278 Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344 VRSG+++VP GQ+EA+ AL L R V++PQAMR I+P LTSQYLNL+KNSSLA A+ Sbjct: 279 VRSGILSVPSGQVEASRALSLPEAITLRKVVIPQAMRVIVPQLTSQYLNLIKNSSLATAI 338 Query: 345 GFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 G+ DLV+V GT +NQTGQAIEI+ + M +YL++S++++ MN NA+ LKE+ Sbjct: 339 GYPDLVAVFAGTTLNQTGQAIEIVAMTMAVYLTISLIVSALMNMYNARTLLKER 392 >gi|90410649|ref|ZP_01218665.1| putative amino acid ABC transporter, permease protein [Photobacterium profundum 3TCK] gi|90328890|gb|EAS45174.1| putative amino acid ABC transporter, permease protein [Photobacterium profundum 3TCK] Length = 403 Score = 298 bits (763), Expect = 9e-79, Method: Compositional matrix adjust. Identities = 169/384 (44%), Positives = 232/384 (60%), Gaps = 1/384 (0%) Query: 15 RMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQ 74 + Y+ I Q+I L L F +NN N++ ++ G GFL++ AGF I Sbjct: 20 KQNLFYNPTFRAIVFQLIAVLGLLFFFYNIINNALENLDARGIATGFGFLNQEAGFGIGL 79 Query: 75 GIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVE 134 ++ Y +Y VG +NT ++ G+ ATIIG VG RLS+N L++ +Y+E Sbjct: 80 TLIDYDETYTYGRTFFVGLLNTALVSVLGIFLATIIGFTVGIARLSSNWLISRFAALYIE 139 Query: 135 VFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSF 194 FRNIP L+ IFF Y +VL LP P S+ + +F+N RGL + + +F Sbjct: 140 TFRNIPLLLQIFFWYFAVLQALPSPRQSLSIGESLFINVRGLYLAGPVFNEGSGWIFAAF 199 Query: 195 VLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQF 254 L +VLS+ S + TG+ P+L + ++ GLP + A + + P L F Sbjct: 200 ALAVVLSIIYAIRSHKKQQDTGEQSPILLTTIGMVIGLPLIAFFAAGMPISVEYPELKGF 259 Query: 255 NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLV 314 NF GG ++ PE +L +ALS YTA+FIAEIVRSG+ AV GQ EA++ALGL K RLV Sbjct: 260 NFRGGISILPELAALLVALSIYTASFIAEIVRSGINAVNHGQTEASLALGLPRSKTLRLV 319 Query: 315 LLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFI 373 ++PQAMR IIPPLTSQYLNL KNSSLA+A+G+ DLVSV GT +NQTGQAIEII + M + Sbjct: 320 VIPQAMRIIIPPLTSQYLNLTKNSSLAMAIGYPDLVSVFAGTTLNQTGQAIEIIAMTMGV 379 Query: 374 YLSLSIMIALFMNRLNAKIALKEK 397 YLSLS++ + FMN N K+AL E+ Sbjct: 380 YLSLSLITSFFMNMYNKKVALVER 403 >gi|317404417|gb|EFV84834.1| amino acid ABC transporter permease [Achromobacter xylosoxidans C54] Length = 396 Score = 298 bits (763), Expect = 9e-79, Method: Compositional matrix adjust. Identities = 173/377 (45%), Positives = 231/377 (61%), Gaps = 1/377 (0%) Query: 21 DMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYT 80 D V + Q+I + + + V+N +N+ N++ G GFL AGF I + + YT Sbjct: 21 DPGVRAVVYQVIALAAVALAVWFLVSNTLHNLSVRNIATGFGFLQREAGFAIGETPIAYT 80 Query: 81 SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140 +Y AI VG +NT +A G++ ATI+GTL+G GRLS N LVA I VYVEV RN+P Sbjct: 81 PADTYGRAIWVGLLNTLRVAVLGIVLATILGTLIGVGRLSKNWLVAKITSVYVEVMRNVP 140 Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200 L+ +FF Y + +P P + G+F++NRGL P L ++ + L IV Sbjct: 141 LLLQLFFWYALITENMPGPRQAHNPLPGVFISNRGLKVPALEGNS-LDWMLAGLGLAIVA 199 Query: 201 SLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGS 260 LF + E TG PL + L+ GLP + + L D P L FNF GG Sbjct: 200 ILFLGHWGKKRQEATGHVFPLGRAAVGLLIGLPIVGWLVSGASLTLDMPELKGFNFSGGL 259 Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320 T+SPEF +L L YT+AFIAE+VRSG+ AV GQ EAA ALGL ++ RLV+LPQA+ Sbjct: 260 TLSPEFAALLAGLVIYTSAFIAEVVRSGIQAVNNGQWEAAGALGLRRKQVLRLVVLPQAL 319 Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380 R IIPP+TSQ+LNL KNSSLAVA+G+ D+VSV T +NQTGQAIE ILI M YL++S+ Sbjct: 320 RVIIPPMTSQFLNLTKNSSLAVAIGYPDIVSVVNTTLNQTGQAIEGILIIMGAYLTVSLS 379 Query: 381 IALFMNRLNAKIALKEK 397 I++FMN N +IAL E+ Sbjct: 380 ISIFMNWYNKRIALVER 396 >gi|327479739|gb|AEA83049.1| polar amino acid ABC transporter, inner membrane subunit [Pseudomonas stutzeri DSM 4166] Length = 394 Score = 298 bits (763), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 168/385 (43%), Positives = 242/385 (62%), Gaps = 3/385 (0%) Query: 15 RMKFLYDMRVHNISVQIILALLLTVIFLWCV-NNVYNNMEKSNLSLGIGFLSERAGFEID 73 R L D RV Q+I A+L V F W + +N NN+ ++ G GFL+ AGF I Sbjct: 11 RRSLLTDPRVRAWVFQVI-AVLAVVAFGWYLFHNTQNNLAHRGITSGFGFLNNAAGFGIS 69 Query: 74 QGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYV 133 Q ++ Y+ SY VG +NT ++ G++ ATI+G ++G GRLS+N L+ + +Y+ Sbjct: 70 QHLIDYSESDSYGRVFWVGLLNTLLVSVIGIVLATIMGFILGVGRLSSNWLIRQLATLYI 129 Query: 134 EVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFS 193 E+FRNIPPL++IFF+Y +V+S LP P +S+ L +F+NNRG+ P + F + Sbjct: 130 EIFRNIPPLLLIFFVYFAVISPLPGPRNSLSLWDAVFVNNRGVQMPAPSAADGFWAFWLA 189 Query: 194 FVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ 253 ++ +V + R +R TG+ P+ + S L +P LV + ++ P L + Sbjct: 190 LLVALVAVVMLHRWARARRHATGRMFPVFWTSLGLFIAIPWLVTLVAGAPFSWEVPELQR 249 Query: 254 FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313 FN GG V PE +S+ +ALS YTAAFI E VRSG+ +V GQ EAA +LGL + RL Sbjct: 250 FNIRGGWVVIPELVSIVVALSVYTAAFIGETVRSGIQSVSHGQTEAAASLGLRPGQVLRL 309 Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMF 372 V++PQA+R I+PPLTSQYLNL KNSSLA A+G+ D+VS+ GT++NQTGQAIE + I M Sbjct: 310 VIVPQALRVIVPPLTSQYLNLAKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETMAITMS 369 Query: 373 IYLSLSIMIALFMNRLNAKIALKEK 397 +YL++SI I+L MN N +IAL E+ Sbjct: 370 VYLAISISISLLMNWYNKRIALIER 394 >gi|197334738|ref|YP_002156346.1| general L-amino acid transport system permease protein AapQ [Vibrio fischeri MJ11] gi|197316228|gb|ACH65675.1| general L-amino acid transport system permease protein AapQ [Vibrio fischeri MJ11] Length = 388 Score = 298 bits (763), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 173/380 (45%), Positives = 239/380 (62%), Gaps = 1/380 (0%) Query: 19 LYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVP 78 LY+ I Q+I L F VNN +N+E ++ G+GFL + AGF I +V Sbjct: 9 LYNPTFRAILFQVIAVAALVFFFYTIVNNALSNLESRGIATGLGFLDQEAGFGIGLSLVE 68 Query: 79 YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138 Y SY +VG +NT ++ G++ AT+ G +G RLS+N LV+ VY+E FRN Sbjct: 69 YDETYSYGRTFVVGLLNTALVSVLGILFATVFGFTIGIARLSSNWLVSRCAAVYIETFRN 128 Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198 IP L+ IFF Y +VL LP P S+ L +FLN RGL FP+ + + + + + I Sbjct: 129 IPLLLQIFFWYFAVLQALPSPRQSLSLGESVFLNVRGLFFPSPIFEEGSNLIGIAVIAAI 188 Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258 + LF ++ +++ TG+ P+L S +FGLPTL + + P L FNF G Sbjct: 189 IFILFLSKWAKNKQRLTGQQTPVLRYSLLALFGLPTLAYFISGMPISIEYPELKGFNFRG 248 Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G ++ PE +L +ALS YTA+FIAEIVRSG+ AV GQ EAA+ALGL ++ +LV++PQ Sbjct: 249 GISIIPELAALVVALSVYTASFIAEIVRSGINAVSHGQTEAAMALGLPRKRTLKLVVIPQ 308 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSL 377 AMR IIPPLTSQYLNL KNSSLA+A+G+ DLVSV GT +NQTGQAIEII + M +YL+L Sbjct: 309 AMRIIIPPLTSQYLNLTKNSSLAMAIGYPDLVSVFAGTTLNQTGQAIEIITMTMAVYLTL 368 Query: 378 SIMIALFMNRLNAKIALKEK 397 S++ + MN N+K+AL E+ Sbjct: 369 SLLTSFLMNIYNSKVALVER 388 >gi|319778956|ref|YP_004129869.1| Glutamate Aspartate transport system permease protein GltJ [Taylorella equigenitalis MCE9] gi|317108980|gb|ADU91726.1| Glutamate Aspartate transport system permease protein GltJ [Taylorella equigenitalis MCE9] Length = 385 Score = 297 bits (761), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 161/384 (41%), Positives = 244/384 (63%), Gaps = 2/384 (0%) Query: 15 RMKFLYDMRVHNISVQIILALLLTVIFLW-CVNNVYNNMEKSNLSLGIGFLSERAGFEID 73 + +F +D V IL L L V +W ++N+ +N+ N+ G F+ + AGF I Sbjct: 3 KFRFSWDDERFRAIVYQILVLALVVAGIWFLISNLLDNLHSRNIQTGFAFIDKEAGFAIS 62 Query: 74 QGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYV 133 + ++ Y +Y A+ VGF+NT +++F G+I TI+GTLVG GRLS N LV+ + VYV Sbjct: 63 ESLIEYKLTDTYLRALAVGFLNTLFVSFLGIIGCTILGTLVGIGRLSHNWLVSKLSLVYV 122 Query: 134 EVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFS 193 EV RNIP L+ +FF Y + +LP P ++ G++L+NRG+ FP L D I++ + Sbjct: 123 EVMRNIPLLIHLFFWYSLLTEILPGPRQALNPVEGVYLSNRGIMFPKLEGDGVIYIWI-A 181 Query: 194 FVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ 253 V +VLS+ + + H K+GK P+ + +T +I GLP LV + Q+ P L Sbjct: 182 LVAALVLSILNSYRCKLKHAKSGKCSPVFWTNTLMIIGLPILVGLIFNSQIGLSVPELKG 241 Query: 254 FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313 FNF GGS +PE +L I L YT+AF+AEIVRSG+ +V +GQ EA +LGL+ + +L Sbjct: 242 FNFRGGSLFTPEMSALLIGLVLYTSAFVAEIVRSGIQSVGKGQWEAGESLGLSKMRTLQL 301 Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI 373 V++PQA+R +IP +++ Y+NL+KNSSLAVA+G+ D+VS+ T++ QTGQAIE I + M Sbjct: 302 VVMPQAIRVMIPSMSNTYMNLMKNSSLAVAIGYPDIVSISNTMLTQTGQAIEAIFVIMMA 361 Query: 374 YLSLSIMIALFMNRLNAKIALKEK 397 YL++S+ IA FM LN ++ + E+ Sbjct: 362 YLTVSLCIAQFMAWLNRRMVIVER 385 >gi|312881586|ref|ZP_07741364.1| amino acid ABC transporter, permease protein [Vibrio caribbenthicus ATCC BAA-2122] gi|309370649|gb|EFP98123.1| amino acid ABC transporter, permease protein [Vibrio caribbenthicus ATCC BAA-2122] Length = 400 Score = 297 bits (760), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 170/385 (44%), Positives = 242/385 (62%), Gaps = 1/385 (0%) Query: 14 SRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEID 73 S+ Y+ ++ QI+ L F VNN +N+E ++ G FLS+ AGF I Sbjct: 16 SKTNIFYNPTFRSVVFQILAVAGLAFFFYTIVNNALSNLEARGIATGFDFLSQEAGFGIG 75 Query: 74 QGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYV 133 ++ Y SY +VG +NT ++F G+I ATI+G ++G RLS N LV+ VY+ Sbjct: 76 LTLIEYDETYSYGRTFIVGLLNTALVSFFGIILATIVGFIMGIARLSTNWLVSRFAAVYI 135 Query: 134 EVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFS 193 E+FRN+P L+ IFF Y +VL LP S+ L +FLN RGL FP +T A I + S Sbjct: 136 EIFRNVPLLLQIFFWYFAVLQALPSARQSLSLGEAIFLNVRGLYFPAPIFETGASIVIGS 195 Query: 194 FVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ 253 FV+GI++++ + +++ + TG+ P+ I+ +P + + + + P L Sbjct: 196 FVVGIIVTILVSVWAKNKQQLTGQQTPMGKITLLFCVVIPVVCYFVMGSPISAEMPELRG 255 Query: 254 FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313 FNF GG ++ PE +L IALS YTA+FIAEIVRSG+ AV GQ EAA++LGL + +L Sbjct: 256 FNFEGGISIIPELAALLIALSIYTASFIAEIVRSGINAVSHGQTEAAMSLGLPRSRTLKL 315 Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMF 372 V++PQA+R IIPPLTSQYLNL KNSSLA+A+G+ DLVSV GT +NQTGQAIEII + M Sbjct: 316 VVIPQALRIIIPPLTSQYLNLTKNSSLAMAIGYPDLVSVFAGTTLNQTGQAIEIIAMTMG 375 Query: 373 IYLSLSIMIALFMNRLNAKIALKEK 397 +YL+LS++ + MN N K+AL E+ Sbjct: 376 VYLTLSLLTSALMNIYNRKVALVER 400 >gi|54309364|ref|YP_130384.1| putative amino acid ABC transporter, permease protein [Photobacterium profundum SS9] gi|46913800|emb|CAG20582.1| putative amino acid ABC transporter, permease protein [Photobacterium profundum SS9] Length = 403 Score = 297 bits (760), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 171/384 (44%), Positives = 229/384 (59%), Gaps = 1/384 (0%) Query: 15 RMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQ 74 + Y+ I QII L L F +NN N++ ++ G GFL+E AGF I Sbjct: 20 KQNLFYNPTFRAIIFQIIAVLGLLFFFYNIINNALENLDARGIATGFGFLNEEAGFGIGL 79 Query: 75 GIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVE 134 ++ Y +Y VG +NT ++ G+ ATIIG VG RLS+N L++ Y+E Sbjct: 80 TLIDYDETYTYGRTFFVGLLNTALVSVLGIFLATIIGFTVGIARLSSNWLISRFAAFYIE 139 Query: 135 VFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSF 194 +FRNIP L+ IFF Y +VL LP P S+ + F+N RGL + + + Sbjct: 140 IFRNIPLLLQIFFWYFAVLQALPSPRQSLSIGESFFINVRGLYLAGPVFNEGSGWIFAAL 199 Query: 195 VLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQF 254 L IVLS+ S + TG+ P+L + ++ GLP + A + + P L F Sbjct: 200 ALAIVLSIIYAIRSHKKQQDTGEQSPVLLTTIGMVIGLPLIAFFAAGMPVSIEYPELKGF 259 Query: 255 NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLV 314 NF GG ++ PE +L +ALS YTA+FIAEIVRSG+ AV GQ EA++ALGL K RLV Sbjct: 260 NFRGGISILPELAALLVALSIYTASFIAEIVRSGINAVNHGQTEASLALGLPRSKTLRLV 319 Query: 315 LLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFI 373 ++PQAMR IIPPLTSQYLNL KNSSLA+A+G+ DLVSV GT +NQTGQAIEII + M + Sbjct: 320 VIPQAMRIIIPPLTSQYLNLTKNSSLAMAIGYPDLVSVFAGTTLNQTGQAIEIIAMTMGV 379 Query: 374 YLSLSIMIALFMNRLNAKIALKEK 397 YLSLS+ + FMN N K+AL E+ Sbjct: 380 YLSLSLTTSFFMNMYNKKVALVER 403 >gi|307546908|ref|YP_003899387.1| ABC transporter permease [Halomonas elongata DSM 2581] gi|307218932|emb|CBV44202.1| ABC-type transport system permease protein [Halomonas elongata DSM 2581] Length = 392 Score = 296 bits (759), Expect = 3e-78, Method: Compositional matrix adjust. Identities = 166/354 (46%), Positives = 228/354 (64%), Gaps = 1/354 (0%) Query: 45 VNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGM 104 V N N+E ++ G GFL ERAGF I Q ++ Y+ DSSYA +VG +NT ++ G+ Sbjct: 39 VTNTLANLEARGITTGFGFLQERAGFSIPQTLIDYSGDSSYARTFVVGLLNTLLVSGMGI 98 Query: 105 IPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIV 164 + ATIIG VG RLS+N L+A + YVE+FRNIP LV I F Y +VL LP P S+ Sbjct: 99 VAATIIGFAVGISRLSSNWLLAKLAAAYVEIFRNIPLLVQILFWYFAVLQALPSPRQSLS 158 Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224 L FLN RGL P +++ +L ++L + + +R +TGK LP+ + Sbjct: 159 LFEAFFLNVRGLVVPAPDPLPGFSATLWALLLAVILVVVLSVYARRRQSRTGKPLPVFRL 218 Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284 ++ GLP V + L ++ P L FNF GG TV PE ++L++ALS YTA+FIAEI Sbjct: 219 GALILIGLPLAVFLVTGRPLAWEVPALTGFNFKGGVTVIPELVALWLALSIYTASFIAEI 278 Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344 VRSG+ +VP+GQ+EAA A+ L R +++PQAMR I+P LTSQYLNL KNSSLA A+ Sbjct: 279 VRSGIQSVPQGQVEAARAISLPGDVTLRKIVIPQAMRVIVPQLTSQYLNLTKNSSLATAI 338 Query: 345 GFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 G+ DLV+V GT +NQTGQAIEI+ I M +YL +S++++ MN NA+ LKE+ Sbjct: 339 GYPDLVAVFAGTALNQTGQAIEIVAITMAVYLLISLVVSALMNLYNARTLLKER 392 >gi|293602098|ref|ZP_06684551.1| amino acid ABC superfamily ATP binding cassette transporter, permease protein [Achromobacter piechaudii ATCC 43553] gi|292819500|gb|EFF78528.1| amino acid ABC superfamily ATP binding cassette transporter, permease protein [Achromobacter piechaudii ATCC 43553] Length = 404 Score = 296 bits (757), Expect = 5e-78, Method: Compositional matrix adjust. Identities = 178/395 (45%), Positives = 241/395 (61%), Gaps = 4/395 (1%) Query: 3 KNARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIG 62 KNA + R R+ + D V ++ Q++ + + V+N +N+ N++ G G Sbjct: 14 KNAPISAPR--RRLNW-NDPGVRSVVYQVLALAAVAWAVWFLVSNTLHNLSVRNIATGFG 70 Query: 63 FLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN 122 FLS AGF I + + Y+ + Y AILVG +NT +A G++ ATI+GTL+G GRLS N Sbjct: 71 FLSREAGFAIGETPIAYSPANDYGRAILVGLLNTLRVAVIGIVLATILGTLIGIGRLSKN 130 Query: 123 KLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLT 182 LVA I VYVEV RN+P L+ +FF Y + +P P + G+F++NRGL P L Sbjct: 131 WLVAKITSVYVEVMRNVPLLLQLFFWYALITENMPGPRQAHNPLPGVFISNRGLKVPGLE 190 Query: 183 MDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY 242 ++ + L IV ++ + HE TG PL + L+ GLP + + Sbjct: 191 GNS-LDWMLAGLGLAIVAIIYLGHYGKKRHEATGHMFPLGRWAIALLIGLPFVGWLVSGA 249 Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302 L D P L FNF GG T+SPEF +L L YT+AFIAE+VRSG+ AV GQ EAA + Sbjct: 250 SLTLDMPELKGFNFSGGLTLSPEFAALLAGLVIYTSAFIAEVVRSGIQAVNNGQWEAAGS 309 Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362 LGL K RLV+LPQA+R IIPP+TSQYLNL KNSSLAVA+G+ D+VSV T +NQTGQ Sbjct: 310 LGLPRAKVLRLVILPQALRVIIPPMTSQYLNLTKNSSLAVAIGYPDIVSVVNTTLNQTGQ 369 Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 AIE ILI M YL++S+ I++FMN N +IAL E+ Sbjct: 370 AIEGILIIMGAYLTVSLSISIFMNWYNKRIALVER 404 >gi|158423210|ref|YP_001524502.1| amino acid ABC transporter permease protein precursor [Azorhizobium caulinodans ORS 571] gi|158330099|dbj|BAF87584.1| amino acid ABC transporter permease protein precursor [Azorhizobium caulinodans ORS 571] Length = 429 Score = 295 bits (754), Expect = 1e-77, Method: Compositional matrix adjust. Identities = 178/411 (43%), Positives = 239/411 (58%), Gaps = 34/411 (8%) Query: 21 DMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYT 80 D +V ++ +Q++L L L + + N N+ + ++ G GFL AGF I Q ++PY Sbjct: 19 DPKVRSLVLQVLLGLFLIWMAWSIIANAQANLARQGIASGFGFLDNSAGFGITQTLIPYG 78 Query: 81 SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140 SY A LVG +NT +A G+I +TIIG L+G RLS N ++ + YVE+ RN+P Sbjct: 79 ESDSYGRAFLVGLLNTLLVAVLGIILSTIIGFLMGVARLSNNVVIKGLSTAYVEITRNLP 138 Query: 141 PLVVIFFLYKSVLSVLPIPDHSI---------------------------------VLPF 167 PL I F Y +VL+ LP P SI V Sbjct: 139 PLFQIMFWYIAVLAALPGPRQSIGFGLQPLLNVLGDGLNAVGLASVGTSLKALAGGVSAP 198 Query: 168 GMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF 227 G+FLNNRGL P A+ ++FV+ +VL R ++ E TG+ P+ + S Sbjct: 199 GVFLNNRGLVIPRAIFGEGAQFVFWAFVVALVLVFVLGRWAKRRREATGQQFPVFWTSLA 258 Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287 L+ GLP L AL + + F+KP L FNF GG V PE +SL +ALS YTA FIAE VRS Sbjct: 259 LLIGLPFLTGAALGFPVTFEKPELRGFNFAGGVRVIPELVSLLLALSIYTAGFIAETVRS 318 Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347 G++AV +GQ EAA +LGL RLV++PQAMR IIP LTSQYLNL KNS+L VAVG+ Sbjct: 319 GILAVSKGQTEAAHSLGLKGGLTMRLVVIPQAMRVIIPQLTSQYLNLTKNSTLGVAVGYP 378 Query: 348 DLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 DL SV GT +NQTGQAIEII I M +YL++S++ L M+ N ++AL E+ Sbjct: 379 DLFSVFAGTTLNQTGQAIEIIAITMAVYLTISVVTTLIMDWYNRRVALIER 429 >gi|262274330|ref|ZP_06052141.1| amino acid ABC transporter permease protein [Grimontia hollisae CIP 101886] gi|262220893|gb|EEY72207.1| amino acid ABC transporter permease protein [Grimontia hollisae CIP 101886] Length = 402 Score = 294 bits (753), Expect = 1e-77, Method: Compositional matrix adjust. Identities = 174/385 (45%), Positives = 241/385 (62%), Gaps = 3/385 (0%) Query: 15 RMKFLYDMRVHNISVQIILALLLTVIFLWC-VNNVYNNMEKSNLSLGIGFLSERAGFEID 73 + +Y+ ++ Q I A++ V F++ VNN N++ ++ G GFL++ AGF I Sbjct: 19 KQSIIYNPTFRSVIFQAI-AIIALVFFVYTIVNNALANLDSRGIATGFGFLTQEAGFGIG 77 Query: 74 QGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYV 133 ++ Y SY VG +NT ++ G+I ATIIG L+G RLS+N LV+ VY+ Sbjct: 78 LTLIEYNETYSYDRTFFVGLLNTALVSVLGIIFATIIGFLMGIARLSSNWLVSRFAAVYI 137 Query: 134 EVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFS 193 E FRNIP L+ IFF Y +VL LP P SI + +F+N RGL + + + + Sbjct: 138 ETFRNIPLLLQIFFWYFAVLQALPSPRESISVGDSLFINVRGLYMTRPVFEEGSNLIFIA 197 Query: 194 FVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ 253 F + +V S +R ++ E TG+ P+ +S I GLP + + + P L Sbjct: 198 FAVSLVFSFVFSRWAKRKQEATGEQTPVFIVSLAAIIGLPLIAFFVAGMPVSLEYPELKG 257 Query: 254 FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313 FNF GG ++ PE +L +ALS YTA+FIAEIVRSG+ AV GQ EAA+ALGL+ K RL Sbjct: 258 FNFRGGISIIPELAALVLALSIYTASFIAEIVRSGINAVSHGQTEAAMALGLSRSKTLRL 317 Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMF 372 V++PQAMR IIPPLTSQYLNL KNSSLA+A+G+ DLVSV GT +NQTGQAIEII + M Sbjct: 318 VVIPQAMRIIIPPLTSQYLNLTKNSSLAMAIGYPDLVSVFAGTTLNQTGQAIEIIAMTMG 377 Query: 373 IYLSLSIMIALFMNRLNAKIALKEK 397 +YL+LS++ +L MN NAK+AL E+ Sbjct: 378 VYLTLSLLTSLVMNIYNAKMALVER 402 >gi|126731768|ref|ZP_01747572.1| putative amino acid ABC transporter permease protein [Sagittula stellata E-37] gi|126707595|gb|EBA06657.1| putative amino acid ABC transporter permease protein [Sagittula stellata E-37] Length = 399 Score = 294 bits (752), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 161/379 (42%), Positives = 241/379 (63%), Gaps = 1/379 (0%) Query: 19 LYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVP 78 +Y I+ Q+++A+ + + L+ NNV N+ +++ G GFL + A F+I + +P Sbjct: 22 IYSKTFRTIATQVVMAVFVVMAGLFLYNNVVENLRAQSIATGFGFLEQDAQFDIGETPIP 81 Query: 79 YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138 + + +YA A LVG +NT ++ +G++ ATI+G VG R+S+N L++ + YVE+ RN Sbjct: 82 FNATDTYARAFLVGLLNTLRVSAAGILLATILGFSVGFARVSSNWLLSKVATGYVEIVRN 141 Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198 IP ++ + F + VL LP +I FLNNRGLSF D +F+ GI Sbjct: 142 IPVILQVIF-WAVVLRNLPAARDAIDFGGFAFLNNRGLSFAVPATDPVHGPMIFACFAGI 200 Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258 VL++ L+R E TG+ + +L+ S LIFGLP +V + P L FNF G Sbjct: 201 VLAILGGYLARRHRENTGRYISMLWPSIGLIFGLPAIVWLLGGAPTALSVPALKGFNFRG 260 Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G T+SPEF +L I ++ Y + FIAEIVR+GL A PRGQ+EAA ++GL R R V+LPQ Sbjct: 261 GVTISPEFTALLIGIALYASGFIAEIVRAGLQATPRGQIEAARSIGLRPRFVMRFVVLPQ 320 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378 A+R I+PPLTSQY++L+KNSS+AV VG+ DLV++G T +NQTGQA+E I + M +YL++S Sbjct: 321 ALRVIVPPLTSQYVSLIKNSSIAVVVGYPDLVNIGNTAMNQTGQAVEAIAVMMLVYLTVS 380 Query: 379 IMIALFMNRLNAKIALKEK 397 ++ + FMN N +A+KE+ Sbjct: 381 LVTSTFMNVYNRLVAIKER 399 >gi|91227964|ref|ZP_01262074.1| amino acid ABC transporter, permease protein [Vibrio alginolyticus 12G01] gi|269968794|ref|ZP_06182783.1| amino acid ABC transporter, permease protein [Vibrio alginolyticus 40B] gi|91188285|gb|EAS74583.1| amino acid ABC transporter, permease protein [Vibrio alginolyticus 12G01] gi|269826606|gb|EEZ80951.1| amino acid ABC transporter, permease protein [Vibrio alginolyticus 40B] Length = 401 Score = 294 bits (752), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 172/392 (43%), Positives = 241/392 (61%), Gaps = 1/392 (0%) Query: 7 KTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSE 66 T+++ +Y+ + QII L F VNN NN++ ++ G GFL++ Sbjct: 10 STMSKPSGSKSLIYNPAFRSAIFQIIAIAALVFFFYTIVNNALNNLDARGIATGFGFLNQ 69 Query: 67 RAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVA 126 AGF I ++ Y SY ++G +NT ++ G+I AT+IG +G RLS+N LV+ Sbjct: 70 EAGFGIGLTLIEYDETYSYGRTFIIGLLNTALVSVLGIILATVIGFTMGVARLSSNWLVS 129 Query: 127 WICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTN 186 + VY+E FRNIP L+ IFF Y +VL LP P S+ L +FLN RGL FP TM+ Sbjct: 130 RLAAVYIETFRNIPLLLQIFFWYFAVLQALPSPRQSLSLGEAIFLNVRGLYFPAPTMEPG 189 Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246 + + + + G++ SL + + TG+ P+ I L+ GLP +V + Sbjct: 190 SSYVIAALIFGVIASLLINVWANNKQRLTGQQTPMGRIVLGLVVGLPLVVYFLAGMPISL 249 Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306 + P L FNF GG ++ PE +L +ALS YTA+FIAEIVRSG+ AV GQ EAA++LGL Sbjct: 250 NYPELKGFNFRGGISIIPELAALLLALSVYTASFIAEIVRSGINAVSHGQTEAAMSLGLP 309 Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIE 365 K +LV++PQA+R IIPPLTSQYLNL KNSSLA+A+G+ DLVSV GT +NQTGQAIE Sbjct: 310 RSKTLKLVVIPQALRIIIPPLTSQYLNLTKNSSLAMAIGYPDLVSVFAGTTLNQTGQAIE 369 Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 II + M +YL+LS++ + MN N K+AL E+ Sbjct: 370 IIAMTMGVYLTLSLITSALMNLYNRKVALVER 401 >gi|89073071|ref|ZP_01159618.1| putative amino acid ABC transporter, permease protein [Photobacterium sp. SKA34] gi|89051289|gb|EAR56745.1| putative amino acid ABC transporter, permease protein [Photobacterium sp. SKA34] Length = 399 Score = 293 bits (751), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 181/385 (47%), Positives = 245/385 (63%), Gaps = 1/385 (0%) Query: 14 SRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEID 73 S+ Y+ + Q+I + L F VNN N+E +S G FLS+ AGF I Sbjct: 15 SKQNIFYNPTFRAVIFQLIAVIGLVFFFYSIVNNALTNLESRGISTGFDFLSQEAGFGIG 74 Query: 74 QGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYV 133 ++ Y SY +VG +NT +A G+I ATIIG ++G RLS+N L++ + VY+ Sbjct: 75 LKLIDYDETYSYGRTFVVGLLNTALVAVLGIILATIIGFIMGIARLSSNWLISRLAAVYI 134 Query: 134 EVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFS 193 EVFRNIP L+ IFF Y +VL LP P SI L +FLN RGLS P+ + ++I + Sbjct: 135 EVFRNIPLLLQIFFWYFAVLQALPSPRQSISLGEAVFLNIRGLSIPSPIYGSGSEIVGWC 194 Query: 194 FVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ 253 + +V+SLF R ++ ++TG+ LP+L T L+ GLP + + + P L Sbjct: 195 LAIAVVISLFFYRYAKKKQQQTGQQLPVLLTVTGLVLGLPLIAFFITGMPIDLEYPELKG 254 Query: 254 FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313 FNF GG T+ PE +L +ALS YTA+FIAEIVRSG+ AV GQ EAA ALGL+ K RL Sbjct: 255 FNFKGGITILPELAALLLALSIYTASFIAEIVRSGINAVSHGQTEAAEALGLSRNKTLRL 314 Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMF 372 V++PQA+R IIPPLTSQYLNL KNSSLA+A+G+ DL+SV GT +NQTGQAIEII + M Sbjct: 315 VVVPQALRIIIPPLTSQYLNLTKNSSLAMAIGYPDLISVFAGTTLNQTGQAIEIIAMTMA 374 Query: 373 IYLSLSIMIALFMNRLNAKIALKEK 397 +YL+LS++ +L MN N K+AL E+ Sbjct: 375 VYLTLSLLTSLVMNIYNKKVALVER 399 >gi|296533468|ref|ZP_06896048.1| amino acid ABC superfamily ATP binding cassette transporter, permease protein [Roseomonas cervicalis ATCC 49957] gi|296266203|gb|EFH12248.1| amino acid ABC superfamily ATP binding cassette transporter, permease protein [Roseomonas cervicalis ATCC 49957] Length = 400 Score = 293 bits (750), Expect = 3e-77, Method: Compositional matrix adjust. Identities = 167/377 (44%), Positives = 238/377 (63%), Gaps = 1/377 (0%) Query: 21 DMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYT 80 D R+ +I Q+++ ++ I W V N +N+E ++ G GFL AG + + ++PY+ Sbjct: 25 DERLRSIVWQVLVLGVVIAIIAWLVGNTQHNLEVRRIATGFGFLEREAGLPVAESLIPYS 84 Query: 81 SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140 +YA A++VG +NT +A G++ AT+ GTL+G RLS N L++ I YVEV R++P Sbjct: 85 PTDTYARALMVGVLNTLKIAVVGVVLATLFGTLLGIARLSKNWLLSRIAAAYVEVVRDLP 144 Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200 L+ + F Y ++L LP P ++ G+FL+NRGL P + + FV GIVL Sbjct: 145 LLLQLLFWY-AILQGLPGPRQALHPMEGVFLSNRGLKLPWIQWQDAHSFALLGFVAGIVL 203 Query: 201 SLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGS 260 ++F R +R G+ + + LI GLP + L D P L FNF GG Sbjct: 204 TVFYARAARARQMADGQPRRVWPAALGLIIGLPLAIWAGLGAPWTGDIPALRGFNFQGGL 263 Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320 T++PE+ +L I L YTAAFIAEIVR+G++AV +GQ EAA ALGL R ++LPQA+ Sbjct: 264 TITPEYFALLIGLVMYTAAFIAEIVRAGILAVAKGQWEAAEALGLPRGLIMRKIVLPQAL 323 Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380 R I+PP+TSQYLNL KNSSLAVA+G+ D+VS+ T +NQTGQAIE I I M +YL++S+ Sbjct: 324 RVIVPPMTSQYLNLTKNSSLAVAIGYQDIVSIANTTLNQTGQAIEGIAIIMAVYLTISLS 383 Query: 381 IALFMNRLNAKIALKEK 397 I+LFMN NA+IAL E+ Sbjct: 384 ISLFMNWYNARIALVER 400 >gi|218514141|ref|ZP_03510981.1| general L-amino acid ABC transporter, permease protein [Rhizobium etli 8C-3] Length = 277 Score = 293 bits (750), Expect = 3e-77, Method: Compositional matrix adjust. Identities = 155/276 (56%), Positives = 194/276 (70%) Query: 122 NKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTL 181 N L+A +C VYVEVFRNIPPL+VIFF Y VL+VLP S+ LP G +LNNRGLSFP Sbjct: 2 NWLIAKLCTVYVEVFRNIPPLLVIFFWYSGVLAVLPNARESLHLPLGAYLNNRGLSFPKP 61 Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALK 241 + + V+ IV ++ R + TG+ ++ S L+ GLP + + Sbjct: 62 IFGDTFWLVGVALVVAIVAAIATARWAHRRQAATGQQFHTIWASIGLLIGLPLIAFLVAG 121 Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301 L FD P+ G+FN GGS V PEFMSL++ALS YTAAFIAEIVR+G+ VP+GQ EAA Sbjct: 122 APLSFDYPIAGKFNLTGGSVVGPEFMSLFLALSFYTAAFIAEIVRAGIRGVPKGQTEAAG 181 Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361 ALGL TRLV++PQA R IIPPL+SQYLNL KNSSLA+A+GFADLV+VG T +NQTG Sbjct: 182 ALGLHPSSITRLVVIPQAFRIIIPPLSSQYLNLTKNSSLAIAIGFADLVAVGSTTLNQTG 241 Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 QA+E+ILIWM +YLSLSI+ +L MN NAK+AL E+ Sbjct: 242 QAVEVILIWMVVYLSLSIVTSLLMNWFNAKMALVER 277 >gi|163800831|ref|ZP_02194731.1| amino acid ABC transporter, permease protein [Vibrio sp. AND4] gi|159175180|gb|EDP59977.1| amino acid ABC transporter, permease protein [Vibrio sp. AND4] Length = 401 Score = 293 bits (749), Expect = 4e-77, Method: Compositional matrix adjust. Identities = 174/392 (44%), Positives = 239/392 (60%), Gaps = 1/392 (0%) Query: 7 KTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSE 66 T+++ LY+ + Q I L F VNN +N+E ++ G GFL++ Sbjct: 10 STMSKPRRSENLLYNPAFRSAFFQFIAVAALVFFFYTIVNNALSNLEARGIATGFGFLNQ 69 Query: 67 RAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVA 126 AGF I ++ Y SY +VG +NT +A G+I ATIIG ++G RLS+N LV+ Sbjct: 70 EAGFGIGLTLIEYDETFSYGRTFIVGLLNTALVAVLGIILATIIGFIMGIARLSSNWLVS 129 Query: 127 WICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTN 186 + VY+E FRNIP L+ IFF Y +VL LP P S+ + +FLN RGL FP + Sbjct: 130 RLAAVYIETFRNIPLLLQIFFWYFAVLQALPSPRQSMSIGEAVFLNVRGLYFPAPIWEAG 189 Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246 + + + +F+ GIV S +R+ TG+ P++ I L+ LP V + Sbjct: 190 SSVVIAAFIFGIVASFLIYIWARNKQRLTGQQTPMVRIVFGLVIVLPLAVYFIAGMPISL 249 Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306 P L FNF GG ++ PE +L +ALS YTA+FIAEIVRSG+ AV GQ EAA++LGL Sbjct: 250 QYPELKGFNFRGGISIIPELAALLLALSVYTASFIAEIVRSGINAVSHGQTEAAMSLGLP 309 Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIE 365 K +LV++PQA+R IIPPLTSQYLNL KNSSLA+A+G+ DLVSV GT +NQTGQAIE Sbjct: 310 RTKTLKLVVIPQALRIIIPPLTSQYLNLTKNSSLAMAIGYPDLVSVFAGTTLNQTGQAIE 369 Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 II + M +YL+LS++ + MN N K+AL E+ Sbjct: 370 IIAMTMGVYLALSLITSALMNLYNRKVALVER 401 >gi|330504739|ref|YP_004381608.1| polar amino acid ABC transporter inner membrane subunit [Pseudomonas mendocina NK-01] gi|328919025|gb|AEB59856.1| polar amino acid ABC transporter, inner membrane subunit [Pseudomonas mendocina NK-01] Length = 375 Score = 293 bits (749), Expect = 4e-77, Method: Compositional matrix adjust. Identities = 166/369 (44%), Positives = 231/369 (62%), Gaps = 1/369 (0%) Query: 30 QIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAI 89 QII + + + + N N+EK + G FL+ AGF I Q ++ YT +SY Sbjct: 7 QIIAVVAVVALGWFLFQNTQANLEKRGIISGFAFLNNSAGFGIAQHLIDYTESNSYGRVF 66 Query: 90 LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 +VG +NT ++F G++ A+I+G ++G RLS N L++ + VY+E+FRNIPPL+ I F Y Sbjct: 67 VVGLLNTLLVSFIGIVLASILGFVLGVARLSPNWLISKLATVYIEIFRNIPPLLQILFWY 126 Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209 +V LP P S+ + FLN+RGL P + + +F + IV + R ++ Sbjct: 127 FAVFLALPGPRQSLDVGETFFLNSRGLYMPAPSPSESFGLFAVVLLATIVGIVALGRWAK 186 Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269 E TGK PLL+ S LI +P L + LH+ P L FNF GG + PE M+L Sbjct: 187 KRREATGKIFPLLWTSLALIVVIPGLTALVAGNPLHWSVPELTGFNFRGGWVMIPELMAL 246 Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329 +AL+ YTAAFIAE VRSG++AV GQ EAA +LGL RLV++PQA+R IIPPLTS Sbjct: 247 TLALTIYTAAFIAENVRSGIMAVSHGQTEAARSLGLRPGITLRLVIIPQALRVIIPPLTS 306 Query: 330 QYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388 QYLNL KNSSLA +G+ D+VS+ GT++NQTGQAIE++ I M +YL++SI I+L MN Sbjct: 307 QYLNLAKNSSLAAGIGYPDMVSLFAGTVLNQTGQAIEVMAITMSVYLAISISISLLMNWY 366 Query: 389 NAKIALKEK 397 N +IAL E+ Sbjct: 367 NKRIALTER 375 >gi|254230450|ref|ZP_04923828.1| ABC transporter, permease protein, putative [Vibrio sp. Ex25] gi|262394187|ref|YP_003286041.1| amino acid ABC transporter permease [Vibrio sp. Ex25] gi|151937021|gb|EDN55901.1| ABC transporter, permease protein, putative [Vibrio sp. Ex25] gi|262337781|gb|ACY51576.1| amino acid ABC transporter permease protein [Vibrio sp. Ex25] Length = 401 Score = 293 bits (749), Expect = 4e-77, Method: Compositional matrix adjust. Identities = 170/392 (43%), Positives = 241/392 (61%), Gaps = 1/392 (0%) Query: 7 KTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSE 66 T+++ +Y+ + QII L F +NN NN++ ++ G GFL++ Sbjct: 10 STMSKPSGSKSLIYNPAFRSAIFQIIAIAALVFFFYTIINNALNNLDARGIATGFGFLNQ 69 Query: 67 RAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVA 126 AGF I ++ Y SY ++G +NT ++ G+I AT+IG +G RLS+N LV+ Sbjct: 70 EAGFGIGLTLIEYDETYSYGRTFIIGLLNTALVSVLGIILATVIGFTMGVARLSSNWLVS 129 Query: 127 WICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTN 186 + VY+E FRNIP L+ IFF Y +VL LP P S+ L +FLN RGL FP M+ Sbjct: 130 RLAAVYIETFRNIPLLLQIFFWYFAVLQALPSPRQSLSLGEAIFLNVRGLYFPAPEMEPG 189 Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246 + + + + G++ SL + + TG+ P+ I+ L+ GLP +V + Sbjct: 190 SGFVIAALIFGVIASLLINVWANNKQRLTGQQTPMGRIALGLVVGLPLIVYFLAGMPISL 249 Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306 + P L FNF GG ++ PE +L +ALS YTA+FIAEIVRSG+ AV GQ EAA++LGL Sbjct: 250 NYPELKGFNFQGGISIIPELAALLLALSVYTASFIAEIVRSGINAVSHGQTEAAMSLGLP 309 Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIE 365 K +LV++PQA+R IIPPLTSQYLNL KNSSLA+A+G+ DLVSV GT +NQTGQAIE Sbjct: 310 RAKTLKLVVIPQALRIIIPPLTSQYLNLTKNSSLAMAIGYPDLVSVFAGTTLNQTGQAIE 369 Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 II + M +YL+LS++ + MN N K+AL E+ Sbjct: 370 IIAMTMGVYLTLSLITSALMNLYNRKVALVER 401 >gi|269964208|ref|ZP_06178499.1| amino acid ABC transporter, permease protein [Vibrio harveyi 1DA3] gi|269831057|gb|EEZ85225.1| amino acid ABC transporter, permease protein [Vibrio harveyi 1DA3] Length = 401 Score = 292 bits (748), Expect = 5e-77, Method: Compositional matrix adjust. Identities = 168/392 (42%), Positives = 241/392 (61%), Gaps = 1/392 (0%) Query: 7 KTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSE 66 T+++ +Y+ + QII L F +NN N++ ++ G GFL++ Sbjct: 10 STMSKPSGSKSLIYNPAFRSALFQIIAVAALVFFFYTIINNALTNLDARGIATGFGFLNQ 69 Query: 67 RAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVA 126 AGF I ++ Y SY +VG +NT ++ G+I AT+IG ++G RLS+N LV+ Sbjct: 70 EAGFGIGLTLIEYDETFSYGRTFVVGLLNTALVSVLGIILATVIGFVMGIARLSSNWLVS 129 Query: 127 WICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTN 186 + VY+E FRNIP L+ IFF Y +VL LP P S+ L +FLN RGL FP M+ Sbjct: 130 RLAAVYIETFRNIPLLLQIFFWYFAVLQALPSPRQSMSLGEAIFLNVRGLYFPAPVMEAG 189 Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246 + + + + + G++ ++ + + TG+ P+ I+ L+ GLP +V + Sbjct: 190 SGLVIAALIFGVIATVLINVWANNKQRLTGQQTPMGRIALGLVVGLPLVVYFLAGMPISL 249 Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306 P L FNF GG ++ PE +L +ALS YTA+FIAEIVRSG+ AV GQ EAA++LGL Sbjct: 250 QYPELKGFNFRGGISIIPELAALLLALSVYTASFIAEIVRSGINAVSHGQTEAAMSLGLP 309 Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIE 365 K +LV++PQA+R IIPPLTSQYLNL KNSSLA+A+G+ DLVSV GT +NQTGQAIE Sbjct: 310 RTKTLKLVVIPQALRIIIPPLTSQYLNLTKNSSLAMAIGYPDLVSVFAGTTLNQTGQAIE 369 Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 II + M +YL+LS++ + MN N K+AL E+ Sbjct: 370 IIAMTMGVYLTLSLITSALMNLYNRKVALVER 401 >gi|33594684|ref|NP_882328.1| putative amino acid ABC transporter permease protein [Bordetella pertussis Tohama I] gi|33603421|ref|NP_890981.1| putative amino acid ABC transporter permease protein [Bordetella bronchiseptica RB50] gi|33564760|emb|CAE44085.1| putative amino acid ABC transporter permease protein [Bordetella pertussis Tohama I] gi|33577545|emb|CAE34810.1| putative amino acid ABC transporter permease protein [Bordetella bronchiseptica RB50] Length = 396 Score = 292 bits (748), Expect = 6e-77, Method: Compositional matrix adjust. Identities = 165/354 (46%), Positives = 226/354 (63%), Gaps = 3/354 (0%) Query: 45 VNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGM 104 V+N +N+ N++ G GFL AGF I + + Y+ +Y AILVG +NT +A G+ Sbjct: 45 VSNTLHNLSVRNIATGFGFLDREAGFAIGETPIAYSPSDTYGRAILVGVLNTLRVAVIGI 104 Query: 105 IPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIV 164 + AT++GTL+G GRLS N LVA + +YVEV RN+P L+ +FF Y + +P P + Sbjct: 105 VLATLLGTLIGIGRLSKNWLVARLTSIYVEVMRNVPLLLQLFFWYALITENMPGPRQAHN 164 Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFS-FVLGIVLSLFATRLSRHFHEKTGKALPLLY 223 G+F++NRG+ P+L + NA ++ L IV + R E TG+ PL Sbjct: 165 PLPGVFISNRGVRVPSL--EGNALDWMLGGLALAIVAIIVLGHWGRKRQEATGRIFPLGR 222 Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283 + L+ GLP + +A L D P L FNF GG +SPEF +L L YT+AF+AE Sbjct: 223 AAIALLIGLPIVGWLASGASLALDMPALKGFNFQGGLNMSPEFAALLAGLVIYTSAFVAE 282 Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343 +VRSG+ AV +GQ EAA +LGL + RLV+LPQA+R IIPP+TSQYLNL KNSSLAVA Sbjct: 283 VVRSGIQAVNQGQWEAAGSLGLRRAQVLRLVVLPQALRVIIPPMTSQYLNLTKNSSLAVA 342 Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 +G+ D+VSV T +NQTGQAIE ILI M YL++S+ I++FMN N +IAL E+ Sbjct: 343 IGYPDIVSVVNTTLNQTGQAIEGILIIMGAYLTVSLTISIFMNWYNKRIALVER 396 >gi|33598478|ref|NP_886121.1| putative amino acid ABC transporter permease protein [Bordetella parapertussis 12822] gi|33574607|emb|CAE39257.1| putative amino acid ABC transporter permease protein [Bordetella parapertussis] Length = 396 Score = 292 bits (748), Expect = 6e-77, Method: Compositional matrix adjust. Identities = 164/354 (46%), Positives = 226/354 (63%), Gaps = 3/354 (0%) Query: 45 VNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGM 104 V+N +N+ N++ G GFL AGF I + + Y+ +Y AILVG +NT +A G+ Sbjct: 45 VSNTLHNLSVRNIATGFGFLDREAGFAIGETPIAYSPSDTYGRAILVGVLNTLRVAVIGI 104 Query: 105 IPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIV 164 + AT++GTL+G GRLS N LV + +YVEV RN+P L+ +FF Y + +P P + Sbjct: 105 VLATLLGTLIGIGRLSKNWLVTRLTSIYVEVMRNVPLLLQLFFWYALITENMPGPRQAHN 164 Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFS-FVLGIVLSLFATRLSRHFHEKTGKALPLLY 223 G+F++NRG+ P+L + NA ++ L IV + R E TG+ PL Sbjct: 165 PLPGVFISNRGVRVPSL--EGNALDWMLGGLALAIVAIIVLGHWGRKRQEATGRIFPLGR 222 Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283 + L+ GLP + +A L D P L FNF GG +SPEF +L L+ YT+AF+AE Sbjct: 223 AAIALLIGLPIVGWLASGASLALDMPALKGFNFQGGLNMSPEFAALLAGLAIYTSAFVAE 282 Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343 +VRSG+ AV +GQ EAA +LGL + RLV+LPQA+R IIPP+TSQYLNL KNSSLAVA Sbjct: 283 VVRSGIQAVNQGQWEAAGSLGLRRAQVLRLVVLPQALRVIIPPMTSQYLNLTKNSSLAVA 342 Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 +G+ D+VSV T +NQTGQAIE ILI M YL++S+ I++FMN N +IAL E+ Sbjct: 343 IGYPDIVSVVNTTLNQTGQAIEGILIIMGAYLTVSLTISIFMNWYNKRIALVER 396 >gi|330446206|ref|ZP_08309858.1| amino ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328490397|dbj|GAA04355.1| amino ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 399 Score = 292 bits (747), Expect = 7e-77, Method: Compositional matrix adjust. Identities = 178/385 (46%), Positives = 244/385 (63%), Gaps = 1/385 (0%) Query: 14 SRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEID 73 S+ Y+ + Q++ + L F VNN N+E +S G FL++ AGF I Sbjct: 15 SKQSIFYNPTFRAVIFQVVAVVGLVFFFYSIVNNALTNLESRGISTGFDFLTQEAGFGIG 74 Query: 74 QGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYV 133 ++ Y SY +VG +NT +A G+I ATIIG ++G RLS+N L++ + VY+ Sbjct: 75 LTLIEYDETYSYGRTFVVGLLNTALVAVLGIILATIIGFIMGVARLSSNWLISRLAAVYI 134 Query: 134 EVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFS 193 EVFRNIP L+ IFF Y +VL LP P S+ L +FLN RGLS P+ + ++I + Sbjct: 135 EVFRNIPLLLQIFFWYFAVLQALPSPRQSVSLGEAIFLNVRGLSIPSPIYGSGSEIIGWC 194 Query: 194 FVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ 253 + +VLS+ R ++ ++TG+ LP+LY L+ GLP + + + P L Sbjct: 195 LAIAVVLSIIFYRYAKKKQQQTGQQLPVLYTVAGLVLGLPLIAFFVTGMPITLEYPELKG 254 Query: 254 FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313 FNF GG T+ PE +L +ALS YTA+FIAEIVRSG+ AV GQ EAA ALGL+ K RL Sbjct: 255 FNFKGGITILPELAALLLALSIYTASFIAEIVRSGINAVSHGQTEAAEALGLSKGKTLRL 314 Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMF 372 V++PQA+R IIPPLTSQYLNL KNSSLA+A+G+ DLVSV GT +NQTGQAIEII + M Sbjct: 315 VVVPQALRIIIPPLTSQYLNLTKNSSLAMAIGYPDLVSVFAGTTLNQTGQAIEIIAMTMA 374 Query: 373 IYLSLSIMIALFMNRLNAKIALKEK 397 +YL+LS++ +L MN N K+AL E+ Sbjct: 375 VYLTLSLLTSLLMNIYNKKVALVER 399 >gi|148980391|ref|ZP_01816034.1| ABC-type amino acid transport system, permease component [Vibrionales bacterium SWAT-3] gi|145961263|gb|EDK26575.1| ABC-type amino acid transport system, permease component [Vibrionales bacterium SWAT-3] Length = 401 Score = 291 bits (745), Expect = 1e-76, Method: Compositional matrix adjust. Identities = 172/385 (44%), Positives = 239/385 (62%), Gaps = 1/385 (0%) Query: 14 SRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEID 73 S LY+ ++ QII L F VNN N+E ++ G FLS+ AGF I Sbjct: 17 SSANLLYNPTFRSVVFQIIAIGALGAFFYTIVNNALTNLEARGIATGFDFLSQEAGFGIG 76 Query: 74 QGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYV 133 +V Y SY +VG +NT ++ G+I AT++G +G RLS+N LV+ VY+ Sbjct: 77 LTLVEYDETFSYGRTFVVGLLNTALVSVLGIILATVLGFSMGIARLSSNWLVSRFAAVYI 136 Query: 134 EVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFS 193 E+FRNIP L+ IFF Y +VL LP S+ L +FLN RGL P ++ + + + Sbjct: 137 EIFRNIPLLLQIFFWYFAVLQALPSARQSLSLGEAIFLNVRGLYLPAPVLEQGSSFVIAA 196 Query: 194 FVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ 253 ++GIV ++ + + + TG+ P+L I+ LI GLP +V L + + P L Sbjct: 197 LIVGIVATIIINIWANNKQKLTGQQTPMLRIALSLIVGLPLVVYFVLGMPISAEYPELKG 256 Query: 254 FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313 FNF GG ++ PE +L +ALS YTA+FIAEIVRSG+ AV GQ EAA++LGL + +L Sbjct: 257 FNFRGGISIIPELAALVLALSIYTASFIAEIVRSGINAVSHGQTEAAMSLGLPRARTLKL 316 Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMF 372 V++PQA+R IIPPLTSQYLNL KNSSLA+A+G+ DLVSV GT +NQTGQAIEII + M Sbjct: 317 VIIPQALRIIIPPLTSQYLNLTKNSSLAMAIGYPDLVSVFAGTTLNQTGQAIEIIAMTMG 376 Query: 373 IYLSLSIMIALFMNRLNAKIALKEK 397 +YL+LS++ + MN N K+AL E+ Sbjct: 377 VYLTLSLLTSALMNIYNRKVALVER 401 >gi|146308574|ref|YP_001189039.1| polar amino acid ABC transporter, inner membrane subunit [Pseudomonas mendocina ymp] gi|145576775|gb|ABP86307.1| amino acid ABC transporter membrane protein 1, PAAT family [Pseudomonas mendocina ymp] Length = 394 Score = 291 bits (744), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 168/368 (45%), Positives = 231/368 (62%), Gaps = 2/368 (0%) Query: 32 ILALLLTVIFLWCV-NNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAIL 90 ILA++ V W + N N+EK + G GFLS AGF I Q ++ Y+ SY + Sbjct: 27 ILAVIAVVALGWFLFQNTQTNLEKRGIVSGFGFLSNSAGFGIAQHLIDYSESDSYGRVFV 86 Query: 91 VGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYK 150 +G +NT ++F G++ A+I+G ++G RLS N L++ + VY+E+FRNIPPL+ I F Y Sbjct: 87 IGLLNTLLVSFIGIVLASILGFILGVARLSPNWLISKLATVYIEIFRNIPPLLQILFWYF 146 Query: 151 SVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRH 210 +V LP P S+ + FLN+RGL P + +F + IV + R ++ Sbjct: 147 AVFLALPGPRQSLDIGETFFLNSRGLYMPAPGPSESFGLFAVVLLATIVGIIALGRWAKK 206 Query: 211 FHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY 270 E TGK PLL+ S LI +P L ++ L + P L FNF GG + PE M+L Sbjct: 207 RREATGKIFPLLWTSLALIVVIPGLTVLIGGNPLVWSVPELRGFNFRGGWVMIPELMALT 266 Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +AL+ YTAAFIAE VRSG++AV GQ EAA +LGL RLV++PQA+R IIPPLTSQ Sbjct: 267 LALTIYTAAFIAENVRSGIMAVSHGQTEAARSLGLRPGITLRLVIIPQALRVIIPPLTSQ 326 Query: 331 YLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 YLNL KNSSLA +G+ D+VS+ GT++NQTGQAIE+I I M +YL++SI I+L MN N Sbjct: 327 YLNLAKNSSLAAGIGYPDMVSLFAGTVLNQTGQAIEVIAITMSVYLAISISISLLMNWYN 386 Query: 390 AKIALKEK 397 +IAL E+ Sbjct: 387 KRIALIER 394 >gi|86148623|ref|ZP_01066905.1| ABC-type amino acid transport system, permease component [Vibrio sp. MED222] gi|218709393|ref|YP_002417014.1| amino-acid ABC transporter permease [Vibrio splendidus LGP32] gi|85833579|gb|EAQ51755.1| ABC-type amino acid transport system, permease component [Vibrio sp. MED222] gi|218322412|emb|CAV18565.1| Amino-acid ABC transporter permease protein [Vibrio splendidus LGP32] Length = 401 Score = 291 bits (744), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 167/379 (44%), Positives = 237/379 (62%), Gaps = 1/379 (0%) Query: 20 YDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPY 79 Y+ +I QI+ L F VNN N++ ++ G FLS+ AGF I ++ Y Sbjct: 23 YNPTFRSIVFQILAVAALCAFFYTIVNNALTNLDSRGIATGFDFLSQEAGFGIGLTLIEY 82 Query: 80 TSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNI 139 SY +G +NT ++ G++ AT++G +G RLS+N LV+ VY+E+FRNI Sbjct: 83 DETFSYGRTFFIGLLNTALVSVLGIMLATVLGFSMGIARLSSNWLVSRFAAVYIEIFRNI 142 Query: 140 PPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIV 199 P L+ IFF Y +VL LP S+ L +FLN RGL FP ++ + I + S ++GI+ Sbjct: 143 PLLLQIFFWYFAVLQALPSARQSMSLGEAIFLNVRGLYFPAPVLEQGSSIVIASLIVGII 202 Query: 200 LSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGG 259 + + + + TG+ P+L I+ LI GLP + + + + PVL FNF GG Sbjct: 203 ATFVINIWANNKQKLTGQQTPMLRIAAALIVGLPLVTYFVMGMPISAEYPVLKGFNFKGG 262 Query: 260 STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319 ++ PE +L +ALS YTAAFIAEIVRSG+ AV GQ EAA++LGL + +LV++PQA Sbjct: 263 ISIIPELAALMLALSIYTAAFIAEIVRSGINAVNHGQTEAAMSLGLPRTRTLKLVIIPQA 322 Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLS 378 +R IIPPLTSQYLNL KNSSLA+A+G+ DLVSV GT +NQTGQAIE+I + M +YL+LS Sbjct: 323 LRIIIPPLTSQYLNLTKNSSLAMAIGYPDLVSVFAGTTLNQTGQAIEVIAMTMGVYLTLS 382 Query: 379 IMIALFMNRLNAKIALKEK 397 ++ + MN N K+AL E+ Sbjct: 383 LLTSALMNIYNRKVALVER 401 >gi|288958132|ref|YP_003448473.1| general L-amino acid transport system permease protein [Azospirillum sp. B510] gi|288910440|dbj|BAI71929.1| general L-amino acid transport system permease protein [Azospirillum sp. B510] Length = 399 Score = 290 bits (743), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 163/380 (42%), Positives = 231/380 (60%), Gaps = 2/380 (0%) Query: 19 LYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVP 78 L D I QI++ + ++ + ++N +N+ + +++ G FL A F I + ++ Sbjct: 21 LSDPTFRAIVYQILVVGAVVLVGWFLISNTLDNLARRSIATGYHFLEREAAFGIGESLID 80 Query: 79 YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138 Y+ SY A LVG +NT ++ G++ AT+IGT++G RLS+N L+A + YVE+ RN Sbjct: 81 YSPKDSYGRAFLVGVLNTLKVSIIGVVLATVIGTIIGVARLSSNWLIARLASTYVEIIRN 140 Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPF-GMFLNNRGLSFPTLTMDTNAKIFVFSFVLG 197 IPPL+ +FF Y V LP P + P G+FL+ RGL P D +F++G Sbjct: 141 IPPLLQLFFWYALVSDGLP-PVRQALNPLPGVFLSQRGLRVPVPAADPVWSSMGIAFLVG 199 Query: 198 IVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFI 257 I + +R ++ +TG+ P + LI GLP L +A D P L FNF Sbjct: 200 IAAAWGVSRWAKARQARTGQRFPAGWAGLGLIIGLPILAWLAGGAPTALDMPTLAGFNFS 259 Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317 GG +SPEF ++ L+ YTAAFIAE+VRSG+ AV GQ EAA ALGL RLV+LP Sbjct: 260 GGLAISPEFFAILTGLTLYTAAFIAEVVRSGIKAVNWGQTEAARALGLPSGPTLRLVILP 319 Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377 QA+R I+PPLTSQYLNL KNSSLA+A+G+ DLVS+ T +NQTGQAIE + + M YL + Sbjct: 320 QALRVIVPPLTSQYLNLTKNSSLALAIGYPDLVSIANTTLNQTGQAIEGVTMIMGTYLVI 379 Query: 378 SIMIALFMNRLNAKIALKEK 397 S+ I++FMN N +IAL E+ Sbjct: 380 SLSISIFMNWYNKRIALVER 399 >gi|90578888|ref|ZP_01234698.1| putative amino acid ABC transporter, permease protein [Vibrio angustum S14] gi|90439721|gb|EAS64902.1| putative amino acid ABC transporter, permease protein [Vibrio angustum S14] Length = 399 Score = 290 bits (743), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 178/385 (46%), Positives = 244/385 (63%), Gaps = 1/385 (0%) Query: 14 SRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEID 73 S+ Y+ + Q+I + L F VNN N+E +S G FLS+ AGF I Sbjct: 15 SKQNIFYNPTFRAVIFQLIAVIGLAFFFYSIVNNALTNLESRGISTGFDFLSQEAGFGIG 74 Query: 74 QGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYV 133 ++ Y +Y +VG +NT +A G+I ATIIG ++G RLS+N L++ + VY+ Sbjct: 75 LTLIDYDETYTYGRTFVVGLLNTALVAVLGIILATIIGFIMGIARLSSNWLISRLAAVYI 134 Query: 134 EVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFS 193 EVFRNIP L+ IFF Y +VL LP P S+ L +FLN RGLS P+ + ++I + Sbjct: 135 EVFRNIPLLLQIFFWYFAVLQALPSPRQSVSLGEAIFLNVRGLSIPSPIYGSGSEIIGWC 194 Query: 194 FVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ 253 + ++LS+ R ++ ++TG+ LP+LY L+ GLP + + + P L Sbjct: 195 LAIAVMLSIIFYRYAKTKQQQTGQQLPVLYTVAGLVLGLPLVAFFVTGMPITLEYPELKG 254 Query: 254 FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313 FNF GG T+ PE +L +ALS YTA+FIAEIVRSG+ AV GQ EAA ALGL+ K RL Sbjct: 255 FNFKGGITILPELAALLLALSIYTASFIAEIVRSGINAVSHGQTEAAEALGLSKSKTLRL 314 Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMF 372 V++PQA+R IIPPLTSQYLNL KNSSLA+A+G+ DLVSV GT +NQTGQAIEII + M Sbjct: 315 VVVPQALRIIIPPLTSQYLNLTKNSSLAMAIGYPDLVSVFAGTTLNQTGQAIEIIAMTMA 374 Query: 373 IYLSLSIMIALFMNRLNAKIALKEK 397 +YL+LS++ +L MN N K+AL E+ Sbjct: 375 VYLTLSLLTSLLMNIYNKKVALVER 399 >gi|260768537|ref|ZP_05877471.1| amino acid ABC transporter permease protein [Vibrio furnissii CIP 102972] gi|260616567|gb|EEX41752.1| amino acid ABC transporter permease protein [Vibrio furnissii CIP 102972] Length = 402 Score = 290 bits (741), Expect = 4e-76, Method: Compositional matrix adjust. Identities = 172/394 (43%), Positives = 240/394 (60%), Gaps = 2/394 (0%) Query: 6 RKTVTRYFSR-MKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFL 64 +KT + S+ Y+ ++ Q+I L F +NN N+E ++ G FL Sbjct: 9 QKTASAAPSKGTSLFYNPTFRSVVFQLIAIAALVFFFYTIINNALTNLESRGIATGFDFL 68 Query: 65 SERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKL 124 + AGF I ++ Y SY +VG +NT ++ G+I AT+IG ++G RLS+N L Sbjct: 69 DQPAGFGIGLTLIDYNETYSYGRTFVVGLLNTALVSVLGIILATMIGFVLGIARLSSNWL 128 Query: 125 VAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMD 184 V+ + VY+E FRNIP L+ IFF Y +VL LP P S+ L +FLN RGL FP + Sbjct: 129 VSRLAAVYIETFRNIPLLLQIFFWYFAVLQALPSPRESMSLGEAVFLNVRGLFFPAPVFE 188 Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244 + + + +FV G++ S+ + + TG+ P+ I L GLP +V + + Sbjct: 189 PGSSVVLIAFVAGVIASIVINIWANNKQRLTGQQTPMGRIVLVLCVGLPLIVYFIMGMPI 248 Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304 P L FNF GG ++ PE +L +ALS YTAAFIAEIVRSG+ AV GQ EAA++LG Sbjct: 249 SAQYPELKGFNFRGGISIIPELAALLLALSVYTAAFIAEIVRSGINAVSHGQTEAAMSLG 308 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQA 363 L K +LV++PQA+R IIPPLTSQYLNL KNSSLA+A+G+ DLVSV GT +NQTGQA Sbjct: 309 LPRSKTLKLVVIPQALRIIIPPLTSQYLNLTKNSSLAMAIGYPDLVSVFAGTTLNQTGQA 368 Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 IEII + M +YL+LS++ + MN N K+AL E+ Sbjct: 369 IEIIAMTMGVYLALSLITSALMNLYNRKVALVER 402 >gi|187479527|ref|YP_787552.1| L-amino acid ABC transporter permease [Bordetella avium 197N] gi|115424114|emb|CAJ50667.1| L-amino acid ABC transporter, permease protein [Bordetella avium 197N] Length = 392 Score = 289 bits (739), Expect = 6e-76, Method: Compositional matrix adjust. Identities = 163/353 (46%), Positives = 222/353 (62%), Gaps = 1/353 (0%) Query: 45 VNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGM 104 V+N +N+ N+S G GFL AGF I + + YT +Y AI+VG +NT +A G+ Sbjct: 41 VSNTLHNLTVRNISTGFGFLDREAGFAIGETPIAYTPADTYGRAIMVGLLNTLRVAVLGI 100 Query: 105 IPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIV 164 I ATI+GTL+G GRLS N LVA + +YVEV RN+P L+ +FF Y + +P P + Sbjct: 101 ILATILGTLIGIGRLSKNWLVARLTSLYVEVMRNVPLLLQLFFWYALITENMPGPRQAHN 160 Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224 G+F++NRG+ P + + + + I+ +L+ ++ TG+ PL+ Sbjct: 161 PLPGVFISNRGIKIPE-AVGNSLDWILLGLAIAIIATLYLGHWAKKRQHATGQVFPLIRT 219 Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284 + L+ LP L + QL P L FNF GG T++PEF +L L YT+AFIAE+ Sbjct: 220 AIGLLIVLPVLGWLLSGMQLTLTMPELKGFNFQGGLTLTPEFAALLAGLVIYTSAFIAEV 279 Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344 VRSG+ AV GQ EAA ALGL RLV+LPQA+R IIPP+TSQYLNL KNSSLAVA+ Sbjct: 280 VRSGIQAVNNGQWEAAGALGLRRSLVLRLVVLPQALRVIIPPMTSQYLNLTKNSSLAVAI 339 Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 G+ D+VSV T +NQTGQAIE ILI M YL++S+ I++FMN N +IAL E+ Sbjct: 340 GYPDIVSVVNTTLNQTGQAIEGILIIMAAYLTVSLSISIFMNWYNKRIALVER 392 >gi|260778551|ref|ZP_05887443.1| amino acid ABC transporter permease protein [Vibrio coralliilyticus ATCC BAA-450] gi|260604715|gb|EEX31010.1| amino acid ABC transporter permease protein [Vibrio coralliilyticus ATCC BAA-450] Length = 347 Score = 289 bits (739), Expect = 6e-76, Method: Compositional matrix adjust. Identities = 164/347 (47%), Positives = 229/347 (65%), Gaps = 1/347 (0%) Query: 52 MEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIG 111 ME ++ G GFL++ AGF I ++ Y SY ++G +NT ++ G+I AT+IG Sbjct: 1 MEARGIATGFGFLTQEAGFGIGLTLIEYDETYSYGRTFIIGLLNTALVSVLGIILATVIG 60 Query: 112 TLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFL 171 ++G RLS+N LV+ + VY+E FRNIP L+ IFF Y +VL LP S+ L +FL Sbjct: 61 FVMGIARLSSNWLVSRLAAVYIETFRNIPLLLQIFFWYFAVLQALPSARQSLSLGEAIFL 120 Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231 N RGL FP+ + + I + SFV+GI+ ++F + +R+ TG+ P+ I+ LI Sbjct: 121 NVRGLYFPSPIFEAGSSIVIASFVIGIIATVFISIWARNKQRLTGQQTPMGRIALGLIVV 180 Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291 PT+V + + + P L FNF GG ++ PE +L +ALS YTA+FIAEIVRSG+ A Sbjct: 181 FPTVVYFLMGSPISAEYPELKGFNFKGGVSIIPELAALLLALSIYTASFIAEIVRSGINA 240 Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 V GQ EAA++LGL + +LV++PQA+R IIPPLTSQYLNL KNSSLA+A+G+ DLVS Sbjct: 241 VSHGQTEAAMSLGLPRSRTLKLVIVPQALRIIIPPLTSQYLNLTKNSSLAMAIGYPDLVS 300 Query: 352 V-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 V GT +NQTGQAIEII + M +YLSLS++ + MN N K+AL E+ Sbjct: 301 VFAGTTLNQTGQAIEIIAMTMAVYLSLSLITSALMNIYNRKVALVER 347 >gi|254508777|ref|ZP_05120889.1| amino acid ABC transporter, permease protein [Vibrio parahaemolyticus 16] gi|219548297|gb|EED25310.1| amino acid ABC transporter, permease protein [Vibrio parahaemolyticus 16] Length = 371 Score = 289 bits (739), Expect = 7e-76, Method: Compositional matrix adjust. Identities = 170/369 (46%), Positives = 237/369 (64%), Gaps = 1/369 (0%) Query: 30 QIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAI 89 QII L L F VNN +N+E ++ G GFL + AGF I ++ Y SY Sbjct: 3 QIIAILALFFFFYTIVNNALSNLEARGIATGFGFLDQEAGFGIGLTLIEYDETYSYGRTF 62 Query: 90 LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 L+G +NT ++F G+I AT++G ++G RLS N LV+ + VY+E+FRN+P L+ IFF Y Sbjct: 63 LIGLLNTALVSFLGIILATVVGFVMGVARLSNNWLVSRLAAVYIEIFRNVPLLLQIFFWY 122 Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209 +VL LP S+ L +FLN RGL FP + + + + S V+G++ S+F +R Sbjct: 123 FAVLQALPSARQSLSLGEAIFLNVRGLYFPAPIFEAGSGVVIASLVIGVLASIFVGIWAR 182 Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269 + TG+ P+ I L+ LPT+V + + + P L FNF GG ++ PE +L Sbjct: 183 NKQRITGQQTPMGRIVFGLVVVLPTIVYFVMGSPISAEYPELKGFNFRGGISIIPELAAL 242 Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329 +ALS YTA+FIAEIVRSG+ AV GQ EAA++LGL + +LV++PQA+R IIPPLTS Sbjct: 243 LLALSIYTASFIAEIVRSGINAVSHGQTEAAMSLGLPKSRTLKLVIIPQALRIIIPPLTS 302 Query: 330 QYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388 QYLNL KNSSLA+A+G+ DLVSV GT +NQTGQAIEII + M +YL+LS++ + MN Sbjct: 303 QYLNLTKNSSLAMAIGYPDLVSVFAGTTLNQTGQAIEIIAMTMAVYLTLSLLTSALMNIY 362 Query: 389 NAKIALKEK 397 N K+AL E+ Sbjct: 363 NRKVALVER 371 >gi|84394264|ref|ZP_00992990.1| ABC-type amino acid transport system, permease component [Vibrio splendidus 12B01] gi|84375103|gb|EAP92024.1| ABC-type amino acid transport system, permease component [Vibrio splendidus 12B01] Length = 401 Score = 288 bits (738), Expect = 7e-76, Method: Compositional matrix adjust. Identities = 165/379 (43%), Positives = 236/379 (62%), Gaps = 1/379 (0%) Query: 20 YDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPY 79 Y+ +I QI+ L F VNN N++ ++ G FLS+ AGF I ++ Y Sbjct: 23 YNPTFRSIVFQILAVGALCAFFYTIVNNALTNLDSRGIATGFDFLSQEAGFGIGLTLIEY 82 Query: 80 TSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNI 139 SY +G +NT ++ G++ AT++G +G RLS+N LV+ +Y+E+FRNI Sbjct: 83 DETFSYGRTFFIGLLNTALVSVLGIMLATVLGFSMGIARLSSNWLVSRFAAIYIEIFRNI 142 Query: 140 PPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIV 199 P L+ IFF Y +VL LP S+ L +FLN RGL FP ++ + I + S + G++ Sbjct: 143 PLLLQIFFWYFAVLQALPSARQSMSLGEAIFLNVRGLYFPAPVLEQGSSIVIASLITGVI 202 Query: 200 LSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGG 259 + + + + TG+ P+L I+ LI GLP + + + + PVL FNF GG Sbjct: 203 ATFVINIWANNKQKLTGQQTPMLRIAAALIVGLPLVTYFVMGMPISAEYPVLKGFNFKGG 262 Query: 260 STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319 ++ PE +L +ALS YTAAFIAEIVRSG+ AV GQ EAA++LGL + +LV++PQA Sbjct: 263 ISIIPELAALMLALSIYTAAFIAEIVRSGINAVNHGQTEAAMSLGLPRTRTLKLVIIPQA 322 Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLS 378 +R IIPPLTSQYLNL KNSSLA+A+G+ DLVSV GT +NQTGQAIE+I + M +YL+LS Sbjct: 323 LRIIIPPLTSQYLNLTKNSSLAMAIGYPDLVSVFAGTTLNQTGQAIEVIAMTMGVYLTLS 382 Query: 379 IMIALFMNRLNAKIALKEK 397 ++ + MN N K+AL E+ Sbjct: 383 LLTSALMNIYNRKVALVER 401 >gi|323492613|ref|ZP_08097757.1| amino acid ABC transporter, permease protein [Vibrio brasiliensis LMG 20546] gi|323312988|gb|EGA66108.1| amino acid ABC transporter, permease protein [Vibrio brasiliensis LMG 20546] Length = 400 Score = 288 bits (736), Expect = 1e-75, Method: Compositional matrix adjust. Identities = 173/385 (44%), Positives = 237/385 (61%), Gaps = 1/385 (0%) Query: 14 SRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEID 73 S Y+ + QII L F VNN N+E ++ G FL++ AGF I Sbjct: 16 SNANLFYNPTFRAVVFQIIAISALVFFFYTIVNNALTNLEARGIATGFDFLTQEAGFGIG 75 Query: 74 QGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYV 133 ++ Y SY +VG +NT ++F G+I AT+IG ++G RLS+N LV+ VY+ Sbjct: 76 LTLIEYDETFSYGRTFMVGLLNTALVSFFGIILATVIGFVMGVARLSSNWLVSRFAAVYI 135 Query: 134 EVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFS 193 E FRNIP L+ IFF Y +VL LP S+ L +FLN RGL FP + + I + S Sbjct: 136 ETFRNIPLLLQIFFWYFAVLQALPSARQSLSLGEAIFLNVRGLYFPAPVFEQGSSIVIAS 195 Query: 194 FVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ 253 FV+GIV ++ +++ + TG+ P+ I+ L LP +V + D P L Sbjct: 196 FVIGIVATILIGVWAKNKQKLTGQQTPMGRIALGLCIALPVVVYFLAGAPISADYPELKG 255 Query: 254 FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313 FNF GG ++ PE +L +ALS YTA+FIAEIVRSG+ AV GQ EAA++LGL + +L Sbjct: 256 FNFKGGISIIPELAALLLALSVYTASFIAEIVRSGINAVSHGQTEAAMSLGLPRSRTLKL 315 Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMF 372 V++PQA+R IIPPLTSQYLNL KNSSLA+A+G+ DLVSV GT +NQTGQAIEII + M Sbjct: 316 VVIPQALRIIIPPLTSQYLNLTKNSSLAMAIGYPDLVSVFAGTTLNQTGQAIEIIAMTMA 375 Query: 373 IYLSLSIMIALFMNRLNAKIALKEK 397 +YL+LS++ + MN N K+AL E+ Sbjct: 376 VYLTLSLLTSALMNLYNKKVALVER 400 >gi|220914745|ref|YP_002490053.1| polar amino acid ABC transporter, inner membrane subunit [Methylobacterium nodulans ORS 2060] gi|219952496|gb|ACL62886.1| polar amino acid ABC transporter, inner membrane subunit [Methylobacterium nodulans ORS 2060] Length = 403 Score = 287 bits (734), Expect = 2e-75, Method: Compositional matrix adjust. Identities = 161/378 (42%), Positives = 233/378 (61%), Gaps = 2/378 (0%) Query: 21 DMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYT 80 D R NI Q+++ +T + + ++N N+E+ ++ G FLS AG I + ++ Y Sbjct: 27 DPRFRNIVWQVVILSAVTAVAWFLISNTNRNLEQRRIATGFAFLSRTAGIPIGEHLIDYD 86 Query: 81 SD-SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNI 139 S+Y A+L+G +NT +A G++ AT+ GTL+G RLS N LV+ + VYVE+ R++ Sbjct: 87 PAVSTYGRALLIGVLNTLKVAVVGVVLATLWGTLLGIARLSRNWLVSKLAAVYVEIIRDV 146 Query: 140 PPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIV 199 P L+ + F Y S+L LP P S G+FL+NRG+ P + D + + +G V Sbjct: 147 PLLLQLLFWY-SILQALPAPRQSFHPVPGVFLSNRGVKIPFVEWDEPYWWALLALTVGAV 205 Query: 200 LSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGG 259 + +R + E+ G + ++ L+ G P V L D P L F+F GG Sbjct: 206 GTWAWSRAATRRQERIGTRPKVWPMAILLMVGFPVAVWAGLGAPFVADVPELRGFDFNGG 265 Query: 260 STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319 T+SPE+ +L + L YTAAFIAEIVRSG++AVP GQ EAA ALG+ R ++LPQA Sbjct: 266 GTISPEYGALTMGLVIYTAAFIAEIVRSGILAVPTGQWEAAAALGVRRGIILRKIVLPQA 325 Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379 +R IIPP+TSQYLNL+KNSSLAVA+G+ D+VS+ T +NQTGQAIE I + M +YL +S+ Sbjct: 326 LRVIIPPMTSQYLNLIKNSSLAVAIGYQDIVSIANTTLNQTGQAIEGIAMVMLVYLVISL 385 Query: 380 MIALFMNRLNAKIALKEK 397 I+LFMN N +IAL E+ Sbjct: 386 SISLFMNWYNGRIALVER 403 >gi|315180249|gb|ADT87163.1| amino acid ABC transporter, permease protein [Vibrio furnissii NCTC 11218] Length = 371 Score = 286 bits (733), Expect = 3e-75, Method: Compositional matrix adjust. Identities = 168/369 (45%), Positives = 230/369 (62%), Gaps = 1/369 (0%) Query: 30 QIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAI 89 Q+I L F +NN N+E ++ G FL + AGF I ++ Y SY Sbjct: 3 QLIAIAALIFFFYTIINNALTNLESRGIATGFDFLDQPAGFGIGLTLIDYNETYSYGRTF 62 Query: 90 LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 +VG +NT ++ G+I AT+IG ++G RLS+N LV+ + VY+E FRNIP L+ IFF Y Sbjct: 63 VVGLLNTALVSVLGIILATMIGFVLGIARLSSNWLVSRLAAVYIETFRNIPLLLQIFFWY 122 Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209 +VL LP P S+ L +FLN RGL FP + + + + +FV G++ S+ + Sbjct: 123 FAVLQALPSPRESMSLGEAVFLNVRGLFFPAPVFEPGSSVVLIAFVAGVIASIVINIWAN 182 Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269 + TG+ P+ I L GLP +V + + P L FNF GG ++ PE +L Sbjct: 183 NKQRLTGQQTPMGRIVLVLCVGLPLIVYFIMGMPISAQYPELKGFNFRGGISIIPELAAL 242 Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329 +ALS YTAAFIAEIVRSG+ AV GQ EAA++LGL K +LV++PQA+R IIPPLTS Sbjct: 243 LLALSVYTAAFIAEIVRSGINAVSHGQTEAAMSLGLPRSKTLKLVVIPQALRIIIPPLTS 302 Query: 330 QYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388 QYLNL KNSSLA+A+G+ DLVSV GT +NQTGQAIEII + M +YL+LS++ + MN Sbjct: 303 QYLNLTKNSSLAMAIGYPDLVSVFAGTTLNQTGQAIEIIAMTMGVYLALSLITSALMNLY 362 Query: 389 NAKIALKEK 397 N K+AL E+ Sbjct: 363 NRKVALVER 371 >gi|296272120|ref|YP_003654751.1| binding-protein-dependent transporter inner membrane component [Arcobacter nitrofigilis DSM 7299] gi|296096295|gb|ADG92245.1| binding-protein-dependent transport systems inner membrane component [Arcobacter nitrofigilis DSM 7299] Length = 393 Score = 286 bits (733), Expect = 3e-75, Method: Compositional matrix adjust. Identities = 166/400 (41%), Positives = 248/400 (62%), Gaps = 11/400 (2%) Query: 2 IKNARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFL---WCVNNVYNNMEKSNLS 58 +K +KTV + F + ++ I QI L L IFL + ++N++ N+EK ++ Sbjct: 1 MKEHKKTV----KGVAFYNNPKIRAIIYQI---LALAAIFLFTYYVLHNMFINIEKRGIN 53 Query: 59 LGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGR 118 G FL AGF I ++PYT +Y ++G +NT ++ G+ +TIIG LVG GR Sbjct: 54 TGFDFLGNEAGFGIISTLIPYTESDTYGRVFIIGILNTLLVSGIGIFFSTIIGLLVGIGR 113 Query: 119 LSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSF 178 LS N +++ +C VYVE FRNIP L+ I F Y VL+ LP P S+ FLNNRGL Sbjct: 114 LSKNFMISKLCLVYVETFRNIPILLQILFWYNVVLAALPGPRQSMSYMDAFFLNNRGLYI 173 Query: 179 PTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLI 238 P +++ + +F++ I ++ + ++ H++TG+ P+ + S ++ P LV Sbjct: 174 PRPILESGFMSVIIAFLIAIAAVVYLAKWAKKKHDETGEEFPVFWTSLVILIASPVLVYF 233 Query: 239 ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQME 298 + L FNF+GG T +PE ++L ALS Y A +IAE VR+G+ AVP+GQ E Sbjct: 234 VSGSPATLEYAQLKGFNFVGGWTFTPELLALSFALSIYPATYIAEAVRAGIEAVPKGQKE 293 Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTII 357 AA +LGL + R V+LPQA+R IIPP+ +QYLNL+KNSSLA A+G+ +LV++ GT + Sbjct: 294 AANSLGLKNHIILRKVVLPQALRVIIPPVINQYLNLMKNSSLATAIGYPELVTLFAGTAL 353 Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 NQ GQAIEIIL+ M +YL++SI+I++ MN +NAKI +KE+ Sbjct: 354 NQVGQAIEIILMTMAVYLTISILISIVMNFINAKIQIKER 393 >gi|288962139|ref|YP_003452434.1| general L-amino acid transport system permease protein [Azospirillum sp. B510] gi|288914405|dbj|BAI75890.1| general L-amino acid transport system permease protein [Azospirillum sp. B510] Length = 385 Score = 286 bits (732), Expect = 4e-75, Method: Compositional matrix adjust. Identities = 160/382 (41%), Positives = 230/382 (60%), Gaps = 1/382 (0%) Query: 16 MKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQG 75 ++ L RV Q + + + V+N N+ ++ G GFL AGFEI + Sbjct: 5 VQALNSARVRGWLYQALFLACALAVAWYLVSNTLTNLATRGVATGFGFLHREAGFEIGES 64 Query: 76 IVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEV 135 ++ Y++ +Y A+ VG +NT ++ +G+ AT++G L+G GRLS+N +V +YVE Sbjct: 65 LLSYSASDTYLKALAVGLLNTLAVSAAGVALATVLGVLIGVGRLSSNWMVNRFATLYVET 124 Query: 136 FRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFV 195 RN+P L+ + Y +V++ LP P ++ + G+FL+NRG+ FP L + + + Sbjct: 125 VRNVPLLLQLVVWY-TVMNRLPSPREALEILPGIFLSNRGMKFPVLVEHAGHGWVLLALL 183 Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFN 255 GI + R R E TG+ P L I+ + P IA L FD P L FN Sbjct: 184 AGIAAAFAVVRHGRRHREATGRPFPTLPIAIAAVLLPPAAAFIATGAPLAFDVPALAGFN 243 Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315 F GG +V+PEF +L I LS YTA FIAEIVRSG++AVP GQ EA +ALGL+ + RL++ Sbjct: 244 FEGGGSVTPEFTALLIGLSVYTAGFIAEIVRSGILAVPHGQTEAGLALGLSPGRILRLII 303 Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375 LPQA+R I+PPLTSQYLNL KNSSLAVA+G+ DLVSV T NQTGQ +E + + M +YL Sbjct: 304 LPQALRVIVPPLTSQYLNLAKNSSLAVAIGYPDLVSVSNTSANQTGQVVEAVAMMMLVYL 363 Query: 376 SLSIMIALFMNRLNAKIALKEK 397 +S+ I+ FMN N ++AL + Sbjct: 364 VISLAISGFMNWYNRRVALVTR 385 >gi|118589035|ref|ZP_01546442.1| probable general l-amino acid transport permease abc transporter protein [Stappia aggregata IAM 12614] gi|118438364|gb|EAV44998.1| probable general l-amino acid transport permease abc transporter protein [Stappia aggregata IAM 12614] Length = 401 Score = 286 bits (731), Expect = 5e-75, Method: Compositional matrix adjust. Identities = 171/392 (43%), Positives = 233/392 (59%), Gaps = 8/392 (2%) Query: 14 SRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEID 73 +R L D + I Q++L + L + V N N+E+ N++ G GF+ AGF + Sbjct: 10 ARASLLNDPKARGIFYQLVLVVALVTLGYVIVTNTIANLERQNIASGWGFVGNTAGFGTN 69 Query: 74 QGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYV 133 Q +V Y+ SSY A+ VGF+NT +A G+ AT+IG ++G RLS N ++ + YV Sbjct: 70 QSLVEYSETSSYGRALFVGFLNTLLVAGVGIFFATVIGFIIGIARLSNNWVINRLAYCYV 129 Query: 134 EVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFS 193 E+ RNIP L+ IFF Y +VL +P L LN GL P M T ++ ++ Sbjct: 130 ELVRNIPLLLQIFFWYFAVLRSIPSKREKWSLFDTFHLNIGGLRLPKPIMGTGSEWVGYA 189 Query: 194 FVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP---- 249 ++GI + R +R E TG+ P LI LP L + + + P Sbjct: 190 LLIGIAAAFLVARWARKRQEATGQPFPSFLTGLGLILMLPILTYFVMGMPISLEHPNFVE 249 Query: 250 ---VLGQ-FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305 +L Q F G V PEF++L AL+ YTA+FIAEIVR+G+ AV GQ EAA ALGL Sbjct: 250 TGPILRQGFELNVGLNVIPEFLALTAALAIYTASFIAEIVRAGIQAVSHGQTEAAHALGL 309 Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365 + RLV++PQAMR IIPPLTSQYLNL KNSSLAVA+ + DLVS+GGT++NQTGQAIE Sbjct: 310 RNGPTLRLVVIPQAMRVIIPPLTSQYLNLTKNSSLAVAIAYPDLVSMGGTVLNQTGQAIE 369 Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 II IWM +YLSLS++ + FMN N ++AL E+ Sbjct: 370 IIGIWMVVYLSLSLITSAFMNWYNQRMALVER 401 >gi|149191355|ref|ZP_01869608.1| ABC-type amino acid transport system, permease component [Vibrio shilonii AK1] gi|148834834|gb|EDL51818.1| ABC-type amino acid transport system, permease component [Vibrio shilonii AK1] Length = 400 Score = 286 bits (731), Expect = 6e-75, Method: Compositional matrix adjust. Identities = 169/382 (44%), Positives = 239/382 (62%), Gaps = 1/382 (0%) Query: 17 KFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGI 76 LY+ +I Q+I L L + F VNN NN+ ++ G FL++ AGF I + Sbjct: 19 NLLYNPTFRSIVFQVIAVLALGLFFYTIVNNALNNLAARGIATGFDFLNQEAGFGIGLTL 78 Query: 77 VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136 + Y SY VG +NT ++ G++ AT++G ++G RLS+N LV+ VY+E+F Sbjct: 79 IEYDETFSYGRTFFVGLLNTALVSVLGIVLATVLGFVIGIARLSSNWLVSRFAAVYIEIF 138 Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196 RNIP L+ IFF Y +VL LP S+ L +FLN RGL FP + + + +F+L Sbjct: 139 RNIPLLLQIFFWYFAVLQALPSARQSMSLGEAIFLNVRGLYFPAPVFGEGSSVVIGAFIL 198 Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256 GI+ ++ +++ + TG+ P+ I LI LP +V + + + PVL FNF Sbjct: 199 GIIATIIINIWAKNKQKLTGQQTPMFRIGLGLIVVLPVVVFFVMGMPITAEYPVLKGFNF 258 Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316 GG ++ PE +L +ALS YTA+FIAEIVRSG+ AV GQ EAA++LGL + +LV++ Sbjct: 259 KGGISIIPELAALTLALSIYTASFIAEIVRSGINAVNHGQTEAAMSLGLPKSRTLKLVVI 318 Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYL 375 PQAMR IIPPLTSQYLNL KNSSLA+A+G+ DLVSV GT +NQ GQAIEII + M +YL Sbjct: 319 PQAMRIIIPPLTSQYLNLTKNSSLAMAIGYPDLVSVFAGTTLNQVGQAIEIIAMTMAVYL 378 Query: 376 SLSIMIALFMNRLNAKIALKEK 397 +LS++ + MN N K+AL E+ Sbjct: 379 TLSLVTSALMNLYNKKVALVER 400 >gi|217977866|ref|YP_002362013.1| polar amino acid ABC transporter, inner membrane subunit [Methylocella silvestris BL2] gi|217503242|gb|ACK50651.1| polar amino acid ABC transporter, inner membrane subunit [Methylocella silvestris BL2] Length = 391 Score = 285 bits (728), Expect = 1e-74, Method: Compositional matrix adjust. Identities = 162/392 (41%), Positives = 231/392 (58%), Gaps = 9/392 (2%) Query: 11 RYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGF 70 R ++ YD R + +QI + +V NME ++ + FL + AGF Sbjct: 4 RRHPALELWYDARARAVLLQIAFVAAFVALAALAFIDVRANMEARGIATDLSFLGKVAGF 63 Query: 71 EIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICR 130 +I+Q ++PY++ S+Y A +VG +NT +A + AT++G +VG RLS N +V Sbjct: 64 DINQSLIPYSAASTYGRAFIVGLLNTLLVAAVSLALATVLGFIVGFARLSKNWIVGQTAM 123 Query: 131 VYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIF 190 YVE RN+P L+ + F Y +VL LP P S+ LPFGMFLNNRGL P + A Sbjct: 124 AYVEAVRNVPLLLQLLFWYNAVLKPLPSPKQSLPLPFGMFLNNRGLFAPAPVFEAGA--- 180 Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALP----LLYISTFLIFGLPTLVLIALKYQLHF 246 F V+ +S+ A R ++ A P ++ ++ LP + + F Sbjct: 181 -FWLVIAAAVSILAAIAMRLTPKRVKFATPPRAFFSGVAAAVLIVLPLAAFVGAGTPIAF 239 Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306 +P L FNF+GG + PEF++L + LS YTAAFIAEIVR+G+ AVPRGQ EAA A+GL Sbjct: 240 IQPELKGFNFVGGVRLLPEFVALVLGLSLYTAAFIAEIVRAGVEAVPRGQREAAAAIGLN 299 Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIE 365 A R V+ PQAMR I+P LTSQYLNL+KNSSLAV +G+ DLV V GT++NQTG A++ Sbjct: 300 SAAANRFVIAPQAMRLIVPLLTSQYLNLIKNSSLAVFIGYPDLVQVFAGTVLNQTGAAVQ 359 Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 +I I M +YL++S++ +L MN + AL E+ Sbjct: 360 VIFITMAVYLAISLLASLAMNLYGRRFALVER 391 >gi|323698173|ref|ZP_08110085.1| binding-protein-dependent transport systems inner membrane component [Desulfovibrio sp. ND132] gi|323458105|gb|EGB13970.1| binding-protein-dependent transport systems inner membrane component [Desulfovibrio desulfuricans ND132] Length = 383 Score = 284 bits (726), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 162/369 (43%), Positives = 227/369 (61%), Gaps = 2/369 (0%) Query: 30 QIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAI 89 Q++L + + L +N N+E N++ G FLS G I+ ++PYT +Y A Sbjct: 16 QVLLIGAILYVALQLFHNTQANLEARNIASGFRFLSVEGGLPINDSLLPYTPADTYGRAF 75 Query: 90 LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 LVG VNT +++ ++ ATI+G LVG R+S N LVA + VYVEV RNIP L+ +FF Y Sbjct: 76 LVGIVNTLFVSALSIVLATILGVLVGVARVSTNWLVAKLAAVYVEVLRNIPLLLTLFFCY 135 Query: 150 KSVLSVLPIPDHSIVLPFG-MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS 208 ++L+ LP P S+ PFG +F+NNRG+ P + + + V + S+F R + Sbjct: 136 STLLAFLPSPRKSLT-PFGDIFINNRGVFVPRPILQDGMGWVLLALVAAVAASIFLVRAA 194 Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268 + ++TG A +IS L+ GLP L FD PVL FNF GG + PEF + Sbjct: 195 KRMRDETGNAPRAGWISLGLVLGLPLAAYYLAGRPLAFDVPVLKGFNFKGGMILRPEFTA 254 Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328 L I L YTAAFI E VRSG+ +V +GQ+EAA ALGL R V+LPQ +R IP T Sbjct: 255 LLIGLVLYTAAFIGENVRSGIQSVDKGQLEAAKALGLKPGVIMRKVILPQTLRVCIPATT 314 Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388 + Y +L+KNSSLAVA+G+ D+VS+GGTII Q QAIEII +WM +YL++++ ++L MN Sbjct: 315 NDYTSLVKNSSLAVAIGYPDMVSIGGTIIGQNDQAIEIIGMWMAVYLTINLAVSLVMNWF 374 Query: 389 NAKIALKEK 397 NAK+ L E+ Sbjct: 375 NAKVQLVER 383 >gi|330811533|ref|YP_004355995.1| Putative amino acid ABC transporter, permease component [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327379641|gb|AEA70991.1| Putative amino acid ABC transporter, permease component [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 393 Score = 283 bits (724), Expect = 4e-74, Method: Compositional matrix adjust. Identities = 164/380 (43%), Positives = 233/380 (61%), Gaps = 1/380 (0%) Query: 19 LYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVP 78 L D RV QI+ + + + + +N N++ ++ G GFL AGF I Q ++ Sbjct: 14 LSDPRVRAWVFQIVTVVAVIALGWFLFDNTQTNLQHRGITSGFGFLERSAGFGIAQHLID 73 Query: 79 YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138 YT SYA ++G +NT + F G+I ATI+G ++G RLS N +++ + VYVEVFRN Sbjct: 74 YTEADSYARVFVIGLLNTLLVTFIGVILATILGFIIGVARLSQNWIISKLATVYVEVFRN 133 Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198 IPPL+ I F Y +V +P P + F+++RGL+ P M FV S VL I Sbjct: 134 IPPLLQILFWYFAVFLSMPGPRAAHNFGDTFFVSSRGLNMPAALMAEGFWPFVISVVLAI 193 Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258 V + TR + E TG+ ++ L +P L + +H++ P L FNF+G Sbjct: 194 VAIVLMTRWANKRFEATGEPFHKFWVGLALFLVIPALSALLFGAPVHWEMPELKGFNFVG 253 Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G + PE ++L +AL+ YTAAFIAEIVRSG+ +V GQ EAA +LGL + R V++PQ Sbjct: 254 GWVLIPELLALTLALTVYTAAFIAEIVRSGIKSVSHGQTEAARSLGLRNGPTLRKVIIPQ 313 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSL 377 A+R IIPPLTSQYLNL KNSSLA +G+ ++VS+ GT++NQTGQAIE+I I M +YL++ Sbjct: 314 ALRVIIPPLTSQYLNLAKNSSLAAGIGYPEMVSLFAGTVLNQTGQAIEVIAITMSVYLAI 373 Query: 378 SIMIALFMNRLNAKIALKEK 397 SI I+L MN N +IAL E+ Sbjct: 374 SISISLLMNWYNKRIALIER 393 >gi|209695503|ref|YP_002263432.1| general L-amino acid ABC transporter permease protein [Aliivibrio salmonicida LFI1238] gi|208009455|emb|CAQ79741.1| general L-amino acid ABC transporter permease protein [Aliivibrio salmonicida LFI1238] Length = 373 Score = 283 bits (723), Expect = 4e-74, Method: Compositional matrix adjust. Identities = 172/380 (45%), Positives = 229/380 (60%), Gaps = 16/380 (4%) Query: 19 LYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVP 78 LY+ I Q++ L F VNN +N+E S GIG +V Sbjct: 9 LYNPTFRAILFQVLAITALGFFFYTIVNNALSNLE----SRGIGL-----------SLVE 53 Query: 79 YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138 Y SY +VG +NT ++ G++ ATI+G VG RLS+N LV+ VY+E FRN Sbjct: 54 YDETYSYGRTFIVGLLNTALVSVLGVLLATILGFTVGIARLSSNWLVSRCAAVYIETFRN 113 Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198 IP L+ IFF Y +VL LP P S+ L +FLN RGL FP+ + + + + VL I Sbjct: 114 IPLLLQIFFWYFAVLPALPSPRQSLSLGESIFLNVRGLFFPSPIFEEGSNLIGMAVVLAI 173 Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258 V +F +R + + TG+ P++ S L+ LPTL + + P L FNF G Sbjct: 174 VFIIFLSRWAHNKQTLTGQQTPVVRYSILLLIALPTLAYFISGMPVSIEYPELKGFNFRG 233 Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G ++ PE +L +ALS YTA+FIAEIVRSG+ AV GQ EAA+ALGL K +LV++PQ Sbjct: 234 GISIIPELAALVVALSVYTASFIAEIVRSGINAVSYGQTEAAMALGLPRNKTLKLVVIPQ 293 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSL 377 AMR IIPPLTSQYLNL KNSSLA+A+G+ DLVSV GT +NQTGQAIEII + M +YL+L Sbjct: 294 AMRIIIPPLTSQYLNLTKNSSLAMAIGYPDLVSVFAGTTLNQTGQAIEIITMTMGVYLTL 353 Query: 378 SIMIALFMNRLNAKIALKEK 397 S++ + MN N K+AL E+ Sbjct: 354 SLLTSFVMNIYNNKVALVER 373 >gi|330962156|gb|EGH62416.1| polar amino acid ABC transporter, inner membrane subunit [Pseudomonas syringae pv. maculicola str. ES4326] Length = 393 Score = 282 bits (721), Expect = 7e-74, Method: Compositional matrix adjust. Identities = 156/380 (41%), Positives = 233/380 (61%), Gaps = 1/380 (0%) Query: 19 LYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVP 78 L D +V QII + + + + +N N++ ++ G GFL AGF I Q ++ Sbjct: 14 LSDPKVRAWLFQIITVVAVISLGWFIFDNTQTNLQHRGITSGFGFLENSAGFGIAQHLID 73 Query: 79 YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138 YT +YA ++G +NT ++ G++ AT++G ++G RLS N +++ + VYVEVFRN Sbjct: 74 YTESDTYARVFVIGLLNTLLVSVIGIVLATLLGFVIGVARLSPNWMISKLATVYVEVFRN 133 Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198 IPPL+ I F Y +V LP P + F+++RGL+ P A F+ S V+ + Sbjct: 134 IPPLLQILFWYTAVFLTLPGPRQAHGYLDMFFVSSRGLNMPRALPAEGAWAFLISIVVAV 193 Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258 + + R + E TG+ ++ L+ +P L ++ +H++ P L FNF G Sbjct: 194 IAIVMMVRWANKRFEATGQPFHKFWVGLALLLAIPGLSMLIFGSPVHWELPQLKGFNFTG 253 Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G + PE +SL +AL+ YTAAFIAEIVRSG+ +V GQ EAA +LGL R V++PQ Sbjct: 254 GWVLIPELISLTLALTIYTAAFIAEIVRSGIKSVSHGQTEAARSLGLRPGPTLRKVIIPQ 313 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSL 377 A+R IIPPLTSQ+LNL KNSSLA A+G+ ++VS+ GT++NQTGQAIE+I I M +YL++ Sbjct: 314 ALRVIIPPLTSQFLNLAKNSSLAAAIGYPEMVSLFAGTVLNQTGQAIEVIAITMSVYLAI 373 Query: 378 SIMIALFMNRLNAKIALKEK 397 SI I++ MN N +IAL E+ Sbjct: 374 SISISMLMNWYNKRIALIER 393 >gi|104783491|ref|YP_609989.1| general amino acid ABC transporter permease [Pseudomonas entomophila L48] gi|95112478|emb|CAK17205.1| general amino acid ABC transporter, permease protein [Pseudomonas entomophila L48] Length = 392 Score = 282 bits (721), Expect = 7e-74, Method: Compositional matrix adjust. Identities = 160/380 (42%), Positives = 232/380 (61%), Gaps = 1/380 (0%) Query: 19 LYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVP 78 L D RV QI+ + + + + +N N+E ++ G FL AGF I Q ++P Sbjct: 13 LSDPRVRAWLFQILTVVFVAGLGWYLFHNTQTNLEHRGITSGFDFLERSAGFGIAQHLIP 72 Query: 79 YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138 Y SYA ++G +NT + F G++ AT++G ++G RLS N ++ + VYVE FRN Sbjct: 73 YVESDSYARVFVIGLLNTLLVTFIGIVLATLLGFIIGVARLSPNWMINKLATVYVETFRN 132 Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198 IPPL+ I F Y +V LP P SI + F++NRGL+ P ++ FV + L I Sbjct: 133 IPPLLQILFWYFAVFLTLPGPRGSINIQDTFFISNRGLNMPGASLAEGFWPFVVALGLAI 192 Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258 V + R + ++TG+ ++ L G+P + + +H++ P L FNF+G Sbjct: 193 VAIVLMVRHANKRFDETGEPFHKFWVGLLLFIGIPGVCALLFGSPVHWEVPQLKGFNFVG 252 Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G + PE ++L +AL+ YTAAFIAEIVRSG+ +V GQ EAA +LGL R V++PQ Sbjct: 253 GWVLIPELLALTLALTIYTAAFIAEIVRSGIRSVSHGQTEAARSLGLREGPTLRKVIIPQ 312 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSL 377 A+R IIPPLTSQYLNL KNSSLA +G+ ++VS+ GT++NQTGQAIE+I I M +YL++ Sbjct: 313 ALRVIIPPLTSQYLNLAKNSSLAAGIGYPEMVSLFAGTVLNQTGQAIEVIAITMSVYLAI 372 Query: 378 SIMIALFMNRLNAKIALKEK 397 SI I+L MN N +IAL E+ Sbjct: 373 SISISLLMNWYNKRIALIER 392 >gi|330887728|gb|EGH20389.1| polar amino acid ABC transporter, inner membrane subunit [Pseudomonas syringae pv. mori str. 301020] Length = 393 Score = 282 bits (721), Expect = 7e-74, Method: Compositional matrix adjust. Identities = 157/380 (41%), Positives = 234/380 (61%), Gaps = 1/380 (0%) Query: 19 LYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVP 78 L D +V QII + + + + +N+ N++ ++ G GFL AGF I Q ++ Sbjct: 14 LSDPKVRAWLFQIITVVAVIALGWFIFDNIQTNLQHRGITSGFGFLENSAGFGIAQHLID 73 Query: 79 YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138 Y+ SYA ++G +NT ++ G++ AT++G ++G RLS N +++ + VYVEVFRN Sbjct: 74 YSEADSYARVFVIGLLNTLLVSVIGIVLATLLGFVIGVARLSPNWMISKLATVYVEVFRN 133 Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198 IPPL+ I F Y +V LP P + F+++RGL+ P A F+ S V+ + Sbjct: 134 IPPLLQILFWYTAVFLTLPGPRQAHGYLDMFFVSSRGLNMPRALPAEGAWAFLISIVVAV 193 Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258 + + R + E TG+ ++ L+ +P L ++ +H++ P L FNF G Sbjct: 194 IAIVMMVRWANKRFEATGQPFHKFWVGLALLLVIPGLSMLVFGSPVHWELPQLKGFNFTG 253 Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G + PE +SL +AL+ YTAAFIAEIVRSG+ +V GQ EAA +LGL R V++PQ Sbjct: 254 GWVLIPELISLTLALTIYTAAFIAEIVRSGIKSVSHGQTEAARSLGLRPGPTLRKVIIPQ 313 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSL 377 A+R IIPPLTSQ+LNL KNSSLA A+G+ ++VS+ GT++NQTGQAIE+I I M +YL++ Sbjct: 314 ALRVIIPPLTSQFLNLAKNSSLAAAIGYPEMVSLFAGTVLNQTGQAIEVIAITMSVYLAI 373 Query: 378 SIMIALFMNRLNAKIALKEK 397 SI I+L MN N +IAL E+ Sbjct: 374 SISISLLMNWYNKRIALIER 393 >gi|154248467|ref|YP_001419425.1| binding-protein-dependent transport systems inner membrane component [Xanthobacter autotrophicus Py2] gi|154162552|gb|ABS69768.1| binding-protein-dependent transport systems inner membrane component [Xanthobacter autotrophicus Py2] Length = 431 Score = 282 bits (721), Expect = 7e-74, Method: Compositional matrix adjust. Identities = 169/419 (40%), Positives = 239/419 (57%), Gaps = 35/419 (8%) Query: 14 SRMKFLY-DMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEI 72 SR ++ + D ++ + +QI+LAL++ + N N+ + ++ G GFL RAGF I Sbjct: 13 SRRRWSWTDPKLRSSVIQIVLALIMVWLVWSFYANAQANLSRLGIASGFGFLDNRAGFAI 72 Query: 73 DQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVY 132 Q ++PY SY A +VG +NT +AF G++ AT+IG ++G RLS N ++ + Y Sbjct: 73 SQTLIPYNESMSYGRAFVVGLLNTLLVAFLGVVLATLIGFVMGVARLSKNVVIKALASAY 132 Query: 133 VEVFRNIPPLVVIFFLYKSVLSVLPIPDHS------------------IVLPF------- 167 VE+ RN+PPL I F Y +VLS LP P S I L F Sbjct: 133 VEITRNLPPLFQIMFWYLAVLSTLPGPRQSWGFGLQPLFGAIGSGLSAIGLGFLGTPISN 192 Query: 168 --------GMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKAL 219 +F+NNRGL P + + +++ + +V S R ++ E TGK Sbjct: 193 FAAGLAAPSVFVNNRGLVLPRPVFEEGSMAILYALIAAVVASFVLARWAKKRREATGKPF 252 Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279 P + L+ LP A + + P L FNF GG V PEF++L +AL+ YT Sbjct: 253 PAFWAGLALLIALPLAASFAAGNPVTIETPELRGFNFAGGLKVIPEFVALLLALAIYTGG 312 Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339 FIAEIVRSG++AV +GQ EAA +LGL + RLV++PQAMR I+PPLTSQYLNL KNSS Sbjct: 313 FIAEIVRSGILAVSKGQSEAAHSLGLRNGPTLRLVIIPQAMRVIVPPLTSQYLNLTKNSS 372 Query: 340 LAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 L VAVG+ DL +V GT +NQTGQAIEII + M +YL++SI+ + M N ++AL E+ Sbjct: 373 LGVAVGYPDLFAVFAGTTLNQTGQAIEIIAVTMAVYLTISILTSAIMGWYNKRVALVER 431 >gi|302188403|ref|ZP_07265076.1| amino acid ABC transporter permease [Pseudomonas syringae pv. syringae 642] Length = 393 Score = 282 bits (721), Expect = 8e-74, Method: Compositional matrix adjust. Identities = 158/380 (41%), Positives = 233/380 (61%), Gaps = 1/380 (0%) Query: 19 LYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVP 78 L D +V QII + + + + +N N++ ++ G GFL AGF I Q ++ Sbjct: 14 LSDPKVRAWLFQIITVVAVIALGWFIFDNTQTNLQHRGITSGFGFLENSAGFGIAQHLID 73 Query: 79 YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138 Y+ SYA ++G +NT ++ G++ AT++G ++G RLS N +++ + VYVEVFRN Sbjct: 74 YSEADSYARVFVIGLLNTLLVSVIGIVLATLLGFVIGVARLSPNWMISKLATVYVEVFRN 133 Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198 IPPL+ I F Y +V LP P + F+++RGL+ P A FV S V+ + Sbjct: 134 IPPLLQILFWYTAVFLTLPGPRQAHGYLDMFFVSSRGLNMPRALPAEGAWAFVVSLVVAV 193 Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258 + + R + E TG+ ++ L+ +P L ++ +H++ P L FNF G Sbjct: 194 IAIVMMVRWANKRFEATGQPFHKFWVGLALLLVIPGLSMLIFGSPVHWELPQLKGFNFSG 253 Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G + PE +SL +AL+ YTAAFIAEIVRSG+ +V GQ EAA +LGL R V++PQ Sbjct: 254 GWVLIPELISLTLALTIYTAAFIAEIVRSGIKSVSHGQTEAARSLGLRPGPTLRKVIIPQ 313 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSL 377 A+R IIPPLTSQ+LNL KNSSLA A+G+ ++VS+ GT++NQTGQAIE+I I M +YL++ Sbjct: 314 ALRVIIPPLTSQFLNLAKNSSLAAAIGYPEMVSLFAGTVLNQTGQAIEVIAITMSVYLAI 373 Query: 378 SIMIALFMNRLNAKIALKEK 397 SI I+L MN N +IAL E+ Sbjct: 374 SISISLLMNWYNKRIALIER 393 >gi|157162751|ref|YP_001460069.1| His/Glu/Gln/Arg/opine ABC transporter permease [Escherichia coli HS] gi|157068431|gb|ABV07686.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Escherichia coli HS] Length = 393 Score = 281 bits (720), Expect = 9e-74, Method: Compositional matrix adjust. Identities = 158/369 (42%), Positives = 228/369 (61%), Gaps = 1/369 (0%) Query: 30 QIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAI 89 QI+ + + I W +N N+ ++ G FL AGF I Q ++ Y +Y Sbjct: 25 QILAVVAVVGIVGWLFHNTVTNLNNRGITSGFAFLDRGAGFGIVQHLIDYQQGDTYGRVF 84 Query: 90 LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 +VG +NT ++ ++ A+++G +G RLS N L+ + +Y+E+FRNIPPL+ IFF Y Sbjct: 85 IVGLLNTLLVSALCIVFASVLGCFIGLARLSDNWLLRKLSTIYIEIFRNIPPLLQIFFWY 144 Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209 +VL LP P ++ FL+NRGL P+ + F+ + V+ IVLS+ R ++ Sbjct: 145 FAVLRNLPGPRQAVSAFDLAFLSNRGLYIPSPQLGDGFIAFILAVVMAIVLSVGLFRFNK 204 Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269 + KTG+ I+ LI GLP L LH+D P L FNF GG + PE +L Sbjct: 205 TYQIKTGQLRRTWPIAAVLIIGLPLLAQWLFGAALHWDVPALRGFNFRGGMVLIPELAAL 264 Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329 +ALS YT+AFIAEI+R+G+ AVP GQ EAA +LGL + R V++PQA+R IIPPLTS Sbjct: 265 TLALSVYTSAFIAEIIRAGIQAVPYGQHEAARSLGLPNPVTLRQVIIPQALRVIIPPLTS 324 Query: 330 QYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388 QYLN++KNSSLA A+G+ D+VS+ GT++NQTGQAIE I + M +YL +S+ I+L MN Sbjct: 325 QYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAMTMSVYLIISLTISLLMNIY 384 Query: 389 NAKIALKEK 397 N +IA+ E+ Sbjct: 385 NRRIAIVER 393 >gi|300928695|ref|ZP_07144213.1| ABC transporter, permease protein [Escherichia coli MS 187-1] gi|300463284|gb|EFK26777.1| ABC transporter, permease protein [Escherichia coli MS 187-1] Length = 399 Score = 281 bits (720), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 158/369 (42%), Positives = 228/369 (61%), Gaps = 1/369 (0%) Query: 30 QIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAI 89 QI+ + + I W +N N+ ++ G FL AGF I Q ++ Y +Y Sbjct: 31 QILAVVAVVGIVGWLFHNTVTNLNNRGITSGFAFLDRSAGFGIVQHLIDYQQGDTYGRVF 90 Query: 90 LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 +VG +NT ++ ++ A+++G +G RLS N L+ + +Y+E+FRNIPPL+ IFF Y Sbjct: 91 IVGLLNTLLVSALCIVFASVLGFFIGLARLSDNWLLRKLSTIYIEIFRNIPPLLQIFFWY 150 Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209 +VL LP P ++ FL+NRGL P+ + F+ + V+ IVLS+ R ++ Sbjct: 151 FAVLRNLPGPRQAVSAFDLAFLSNRGLYIPSPQLGDGFIAFILAVVMAIVLSVGLFRFNK 210 Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269 + KTG+ I+ LI GLP L LH+D P L FNF GG + PE +L Sbjct: 211 TYQIKTGQLRRTWPIAAVLIIGLPLLAQWLFGAALHWDVPALRGFNFRGGMVLIPELAAL 270 Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329 +ALS YT+AFIAEI+R+G+ AVP GQ EAA +LGL + R V++PQA+R IIPPLTS Sbjct: 271 TLALSVYTSAFIAEIIRAGIQAVPYGQHEAARSLGLPNPVTLRQVIIPQALRVIIPPLTS 330 Query: 330 QYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388 QYLN++KNSSLA A+G+ D+VS+ GT++NQTGQAIE I + M +YL +S+ I+L MN Sbjct: 331 QYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAMTMSVYLIISLTISLLMNIY 390 Query: 389 NAKIALKEK 397 N +IA+ E+ Sbjct: 391 NRRIAIVER 399 >gi|284923283|emb|CBG36377.1| ABC transporter, permease protein [Escherichia coli 042] Length = 399 Score = 281 bits (719), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 159/369 (43%), Positives = 228/369 (61%), Gaps = 1/369 (0%) Query: 30 QIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAI 89 QI+ + + I W +N N+ ++ G FL AGF I Q ++ Y +Y Sbjct: 31 QILAVVAVVGIVGWLFHNTVTNLSNRGITSGFAFLDRGAGFGIVQHLIDYQQGDTYGRVF 90 Query: 90 LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 +VG +NT ++ +I A+++G +G RLS N L+ + +Y+E+FRNIPPL+ IFF Y Sbjct: 91 IVGLLNTLLVSALCIIFASVLGFFIGLARLSDNWLLRKLSTIYIEIFRNIPPLLQIFFWY 150 Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209 +VL LP P ++ FL+NRGL P+ + F+ + V+ IVLS+ R ++ Sbjct: 151 FAVLRNLPGPRQAVSAFDLAFLSNRGLYIPSPQLGDGFIAFILAVVMAIVLSVGLFRFNK 210 Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269 + KTG+ I+ LI GLP L LH+D P L FNF GG + PE +L Sbjct: 211 TYQIKTGQLRRTWPIAAVLIIGLPLLAQWLFGAALHWDVPALRGFNFRGGMVLIPELAAL 270 Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329 +ALS YT+AFIAEI+R+G+ AVP GQ EAA +LGL + R V++PQA+R IIPPLTS Sbjct: 271 TLALSVYTSAFIAEIIRAGIQAVPYGQHEAARSLGLPNPVTLRQVIIPQALRVIIPPLTS 330 Query: 330 QYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388 QYLN++KNSSLA A+G+ D+VS+ GT++NQTGQAIE I + M +YL +S+ I+L MN Sbjct: 331 QYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAMTMSVYLIISLTISLLMNIY 390 Query: 389 NAKIALKEK 397 N +IA+ E+ Sbjct: 391 NRRIAIVER 399 >gi|71736483|ref|YP_273399.1| amino acid ABC transporter permease [Pseudomonas syringae pv. phaseolicola 1448A] gi|257487409|ref|ZP_05641450.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tabaci ATCC 11528] gi|289628606|ref|ZP_06461560.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289647199|ref|ZP_06478542.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. aesculi str. 2250] gi|298485801|ref|ZP_07003880.1| ABC-type amino acid transport system, permease component yhdX [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|71557036|gb|AAZ36247.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. phaseolicola 1448A] gi|298159827|gb|EFI00869.1| ABC-type amino acid transport system, permease component yhdX [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|320325828|gb|EFW81889.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. glycinea str. B076] gi|320327254|gb|EFW83268.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. glycinea str. race 4] gi|330867829|gb|EGH02538.1| polar amino acid ABC transporter, inner membrane subunit [Pseudomonas syringae pv. aesculi str. 0893_23] gi|330882635|gb|EGH16784.1| polar amino acid ABC transporter, inner membrane subunit [Pseudomonas syringae pv. glycinea str. race 4] gi|330988312|gb|EGH86415.1| polar amino acid ABC transporter, inner membrane subunit [Pseudomonas syringae pv. lachrymans str. M301315] Length = 393 Score = 281 bits (719), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 157/380 (41%), Positives = 233/380 (61%), Gaps = 1/380 (0%) Query: 19 LYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVP 78 L D +V QII + + + + +N N++ ++ G GFL AGF I Q ++ Sbjct: 14 LSDPKVRAWLFQIITVVAVIALGWFIFDNTQTNLQHRGITSGFGFLENSAGFGIAQHLID 73 Query: 79 YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138 Y+ SYA ++G +NT ++ G++ AT++G ++G RLS N +++ + VYVEVFRN Sbjct: 74 YSEADSYARVFVIGLLNTLLVSVIGIVLATLLGFVIGVARLSPNWMISKLATVYVEVFRN 133 Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198 IPPL+ I F Y +V LP P + F+++RGL+ P A F+ S V+ + Sbjct: 134 IPPLLQILFWYTAVFLTLPGPRQAHGYLDMFFVSSRGLNMPRALPAEGAWAFLISIVVAV 193 Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258 + + R + E TG+ ++ L+ +P L ++ +H++ P L FNF G Sbjct: 194 IAIVMMVRWANKRFEATGQPFHKFWVGLALLLVIPGLSMLVFGSPVHWELPQLKGFNFTG 253 Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G + PE +SL +AL+ YTAAFIAEIVRSG+ +V GQ EAA +LGL R V++PQ Sbjct: 254 GWVLIPELISLTLALTIYTAAFIAEIVRSGIKSVSHGQTEAARSLGLRPGPTLRKVIIPQ 313 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSL 377 A+R IIPPLTSQ+LNL KNSSLA A+G+ ++VS+ GT++NQTGQAIE+I I M +YL++ Sbjct: 314 ALRVIIPPLTSQFLNLAKNSSLAAAIGYPEMVSLFAGTVLNQTGQAIEVIAITMSVYLAI 373 Query: 378 SIMIALFMNRLNAKIALKEK 397 SI I+L MN N +IAL E+ Sbjct: 374 SISISLLMNWYNKRIALIER 393 >gi|261228274|ref|ZP_05942555.1| predicted amino-acid transporter subunit, membrane component of ABC superfamily protein [Escherichia coli O157:H7 str. FRIK2000] gi|261255132|ref|ZP_05947665.1| predicted amino-acid transporter subunit, membrane component of ABC superfamily protein [Escherichia coli O157:H7 str. FRIK966] gi|13363615|dbj|BAB37565.1| putative transport system permease protein [Escherichia coli O157:H7 str. Sakai] gi|209757448|gb|ACI77036.1| putative transport system permease protein [Escherichia coli] gi|209757450|gb|ACI77037.1| putative transport system permease protein [Escherichia coli] gi|209757452|gb|ACI77038.1| putative transport system permease protein [Escherichia coli] gi|209757454|gb|ACI77039.1| putative transport system permease protein [Escherichia coli] gi|209757456|gb|ACI77040.1| putative transport system permease protein [Escherichia coli] Length = 399 Score = 281 bits (719), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 158/369 (42%), Positives = 228/369 (61%), Gaps = 1/369 (0%) Query: 30 QIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAI 89 QI+ + + I W +N N+ ++ G FL AGF I Q ++ Y +Y Sbjct: 31 QILAVVAVVGIVGWLFHNTVTNLNNRGITSGFAFLDRGAGFGIVQHLIDYQQGDTYGRVF 90 Query: 90 LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 +VG +NT ++ ++ A+++G +G RLS N L+ + +Y+E+FRNIPPL+ IFF Y Sbjct: 91 IVGLLNTLLVSALCIVFASVLGFFIGLARLSDNWLLRKLSTIYIEIFRNIPPLLQIFFWY 150 Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209 +VL LP P ++ FL+NRGL P+ + F+ + V+ IVLS+ R ++ Sbjct: 151 FAVLRNLPGPRQAVSAFDLAFLSNRGLYIPSPQLGDGFIAFILAVVMAIVLSVGLFRFNK 210 Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269 + KTG+ I+ LI GLP L LH+D P L FNF GG + PE +L Sbjct: 211 TYQIKTGQLRRTWPIAAVLIIGLPLLAQWLFGAALHWDVPALQGFNFRGGMVLIPELAAL 270 Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329 +ALS YT+AFIAEI+R+G+ AVP GQ EAA +LGL + R V++PQA+R IIPPLTS Sbjct: 271 TLALSVYTSAFIAEIIRAGIQAVPYGQHEAARSLGLPNPVTLRQVIIPQALRVIIPPLTS 330 Query: 330 QYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388 QYLN++KNSSLA A+G+ D+VS+ GT++NQTGQAIE I + M +YL +S+ I+L MN Sbjct: 331 QYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAMTMSVYLIISLTISLLMNIY 390 Query: 389 NAKIALKEK 397 N +IA+ E+ Sbjct: 391 NRRIAIVER 399 >gi|331664878|ref|ZP_08365783.1| putative amino-acid ABC transporter permease protein YhdX [Escherichia coli TA143] gi|331058126|gb|EGI30108.1| putative amino-acid ABC transporter permease protein YhdX [Escherichia coli TA143] Length = 393 Score = 281 bits (719), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 159/369 (43%), Positives = 228/369 (61%), Gaps = 1/369 (0%) Query: 30 QIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAI 89 QI+ + + I W +N N+ ++ G FL AGF I Q ++ Y +Y Sbjct: 25 QILAVVAVVGIVGWLFHNTVTNLSNRGITSGFAFLDRGAGFGIVQHLIDYQQGDTYGRVF 84 Query: 90 LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 +VG +NT ++ +I A+++G +G RLS N L+ + +Y+E+FRNIPPL+ IFF Y Sbjct: 85 IVGLLNTLLVSALCIIFASVLGFFIGLARLSDNWLLRKLSTIYIEIFRNIPPLLQIFFWY 144 Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209 +VL LP P ++ FL+NRGL P+ + F+ + V+ IVLS+ R ++ Sbjct: 145 FAVLRNLPGPRQAVSAFDLAFLSNRGLYIPSPQLGDGFIAFILAVVMAIVLSVGLFRFNK 204 Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269 + KTG+ I+ LI GLP L LH+D P L FNF GG + PE +L Sbjct: 205 TYQIKTGQLRRTWPIAAVLIIGLPLLAQWLFGAALHWDVPALRGFNFRGGMVLIPELAAL 264 Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329 +ALS YT+AFIAEI+R+G+ AVP GQ EAA +LGL + R V++PQA+R IIPPLTS Sbjct: 265 TLALSVYTSAFIAEIIRAGIQAVPYGQHEAARSLGLPNPVTLRQVIIPQALRVIIPPLTS 324 Query: 330 QYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388 QYLN++KNSSLA A+G+ D+VS+ GT++NQTGQAIE I + M +YL +S+ I+L MN Sbjct: 325 QYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAMTMSVYLIISLTISLLMNIY 384 Query: 389 NAKIALKEK 397 N +IA+ E+ Sbjct: 385 NRRIAIVER 393 >gi|194440034|ref|ZP_03072091.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Escherichia coli 101-1] gi|253771900|ref|YP_003034731.1| polar amino acid ABC transporter inner membrane subunit [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254163204|ref|YP_003046312.1| putative amino-acid transporter subunit [Escherichia coli B str. REL606] gi|194421038|gb|EDX37068.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Escherichia coli 101-1] gi|242378803|emb|CAQ33595.1| yhdX, subunit of YhdW/YhdX/YhdY/YhdZ ABC transporter [Escherichia coli BL21(DE3)] gi|253322944|gb|ACT27546.1| polar amino acid ABC transporter, inner membrane subunit [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253975105|gb|ACT40776.1| predicted amino-acid transporter subunit [Escherichia coli B str. REL606] gi|253979261|gb|ACT44931.1| predicted amino-acid transporter subunit [Escherichia coli BL21(DE3)] gi|323970316|gb|EGB65586.1| inner membrane transport system [Escherichia coli TA007] Length = 393 Score = 281 bits (719), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 158/369 (42%), Positives = 228/369 (61%), Gaps = 1/369 (0%) Query: 30 QIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAI 89 QI+ + + I W +N N+ ++ G FL AGF I Q ++ Y +Y Sbjct: 25 QILAVVAVVGIVGWLFHNTVTNLNNRGITSGFAFLDRSAGFGIVQHLIDYQQGDTYGRVF 84 Query: 90 LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 +VG +NT ++ ++ A+++G +G RLS N L+ + +Y+E+FRNIPPL+ IFF Y Sbjct: 85 IVGLLNTLLVSALCIVFASVLGFFIGLARLSDNWLLRKLSTIYIEIFRNIPPLLQIFFWY 144 Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209 +VL LP P ++ FL+NRGL P+ + F+ + V+ IVLS+ R ++ Sbjct: 145 FAVLRNLPGPRQAVSAFDLAFLSNRGLYIPSPQLGDGFIAFILAVVMAIVLSVGLFRFNK 204 Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269 + KTG+ I+ LI GLP L LH+D P L FNF GG + PE +L Sbjct: 205 TYQIKTGQLRRTWPIAAVLIIGLPLLAQWLFGAALHWDVPALRGFNFRGGMVLIPELAAL 264 Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329 +ALS YT+AFIAEI+R+G+ AVP GQ EAA +LGL + R V++PQA+R IIPPLTS Sbjct: 265 TLALSVYTSAFIAEIIRAGIQAVPYGQHEAARSLGLPNPVTLRQVIIPQALRVIIPPLTS 324 Query: 330 QYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388 QYLN++KNSSLA A+G+ D+VS+ GT++NQTGQAIE I + M +YL +S+ I+L MN Sbjct: 325 QYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAMTMSVYLIISLTISLLMNIY 384 Query: 389 NAKIALKEK 397 N +IA+ E+ Sbjct: 385 NRRIAIVER 393 >gi|261252933|ref|ZP_05945506.1| amino acid ABC transporter permease protein [Vibrio orientalis CIP 102891] gi|260936324|gb|EEX92313.1| amino acid ABC transporter permease protein [Vibrio orientalis CIP 102891] Length = 400 Score = 281 bits (719), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 168/382 (43%), Positives = 239/382 (62%), Gaps = 1/382 (0%) Query: 17 KFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGI 76 +Y+ + QII L F VNN N+E ++ G FL + AGF I + Sbjct: 19 NLIYNPTFRAVVFQIIAIAALVFFFYTIVNNALTNLEARGIATGFDFLDQEAGFGIGLTL 78 Query: 77 VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136 + Y SY ++G +NT ++F G+I AT+IG ++G RLS+N LV+ + VY+E+F Sbjct: 79 IEYDETYSYGRTFVIGLLNTALVSFFGIILATVIGFIMGIARLSSNWLVSRLAAVYIEIF 138 Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196 RN+P L+ IFF Y +VL LP S+ L +FLN RGL FP + + I V +FV+ Sbjct: 139 RNVPLLLQIFFWYFAVLQALPSARQSLSLGEAIFLNVRGLYFPAPIFEQGSSIVVATFVI 198 Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256 G++ S+ +++ + TG+ P+ I+ L LP +V + + + P L FNF Sbjct: 199 GLIASIVIGIWAKNKQKLTGQQTPMGRIALGLCVVLPVIVYFLMGSPISAELPELKGFNF 258 Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316 GG ++ PE +L +ALS YTA+FIAEIVRSG+ AV GQ EAA++LGL + +LV++ Sbjct: 259 RGGISIIPELAALLLALSIYTASFIAEIVRSGINAVNHGQTEAAMSLGLPRSRTLKLVVI 318 Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYL 375 PQA+R IIPPLTSQYLNL KNSSLA+A+G+ DLVSV GT +NQTGQAIEII + M +YL Sbjct: 319 PQALRIIIPPLTSQYLNLTKNSSLAMAIGYPDLVSVFAGTTLNQTGQAIEIIAMTMGVYL 378 Query: 376 SLSIMIALFMNRLNAKIALKEK 397 +LS++ + MN N K+AL E+ Sbjct: 379 TLSLLTSALMNIYNRKVALVER 400 >gi|224371699|ref|YP_002605863.1| ABC-type branched-chain amino acid transport-system, permease component [Desulfobacterium autotrophicum HRM2] gi|223694416|gb|ACN17699.1| ABC-type branched-chain amino acid transport-system, permease component [Desulfobacterium autotrophicum HRM2] Length = 386 Score = 281 bits (718), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 149/349 (42%), Positives = 220/349 (63%), Gaps = 2/349 (0%) Query: 47 NVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIP 106 N N+E N++ G GFLS +G I ++PYT SY A L+G +NT ++AF G++ Sbjct: 36 NTQANLEARNIASGFGFLSLESGMPISNSLLPYTPADSYGYAFLMGILNTLYVAFMGIVL 95 Query: 107 ATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLP 166 ATI+G L+G R+S+N L++ + +YVEV RNIP L+++FF Y L+ LP P S++ P Sbjct: 96 ATIMGILIGVARVSSNWLISKLAEIYVEVLRNIPLLLILFFTYSIALAALPSPQKSLI-P 154 Query: 167 F-GMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225 F G FLNNRG+ P + +F+ GI++++ R H +TG+ +P ++ Sbjct: 155 FSGFFLNNRGIYLPRPMPEPGFWFVGMAFLAGILVAVLINRYGAKRHRETGRIIPSFFLG 214 Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285 + LPT+ L ++ VL FNF GG + PEF +L L YTAAFI E V Sbjct: 215 MIAVVTLPTIAWFLASTPLSWEFAVLRGFNFKGGLVIRPEFSALMTGLVLYTAAFIGENV 274 Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345 RSG+ +V GQ+ ++ ALGL R V+LPQA+R IIP T+ Y +L+KNSSLAVA+G Sbjct: 275 RSGIQSVNIGQINSSKALGLPPGLTMRKVILPQALRVIIPATTNDYTSLVKNSSLAVAIG 334 Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394 + D+VS+GGTII Q QAIE+I IWM +Y+++++++++ MN LN K+ L Sbjct: 335 YPDMVSIGGTIIGQNDQAIEVIAIWMGVYMTINLIVSMIMNWLNGKVQL 383 >gi|89092423|ref|ZP_01165377.1| general L-amino acid transport system permease protein AapQ [Oceanospirillum sp. MED92] gi|89083511|gb|EAR62729.1| general L-amino acid transport system permease protein AapQ [Oceanospirillum sp. MED92] Length = 393 Score = 281 bits (718), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 153/355 (43%), Positives = 228/355 (64%), Gaps = 3/355 (0%) Query: 45 VNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGM 104 ++N NME + G FL AGF+I ++PY + ++Y +VG +NT ++ G+ Sbjct: 40 ISNTLANMEARGIQSGYDFLFNTAGFDILMSLIPYDATNTYGRTFIVGLLNTVLVSIIGI 99 Query: 105 IPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIV 164 I +TI+G ++G S N L+ + YVE FRNIP L+ IFF Y +VL+ LP S+ Sbjct: 100 ILSTIVGFIMGVAHFSHNLLIRKLATAYVETFRNIPLLLQIFFWYFAVLAALPSARQSMS 159 Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFA-TRLSRHFHEKTGKALPLLY 223 L +FLN RGL FP LT + A + V++ + ++ +F R ++ + TG+ P+L+ Sbjct: 160 LGEVIFLNVRGLYFPGLTPEGGASV-VYAAIAAAIIGIFVLKRWAKKRQDDTGQQFPVLW 218 Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283 +S ++FGLP L LI + + +D P L FNF GG TV PE M+L +AL+ YT AFIAE Sbjct: 219 VSLGMLFGLPLLALIVMGFPFAWDIPYLKGFNFRGGVTVIPELMALALALTVYTGAFIAE 278 Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343 VR+G+ AVP GQ EAA ++GL K +L+++PQAMR I+P L S+Y +L+KNS+LA A Sbjct: 279 AVRAGIQAVPHGQTEAARSIGLKEGKIMKLIIVPQAMRVIVPLLNSEYQSLVKNSTLATA 338 Query: 344 VGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 +G+ DL +V GT +NQTGQAIEI+ + M +Y +++ I+ MNRLN+ +AL E+ Sbjct: 339 IGYPDLFTVFVGTTLNQTGQAIEIVFMTMAVYFVVNMTISFLMNRLNSSVALTER 393 >gi|126464336|ref|YP_001045449.1| polar amino acid ABC transporter, inner membrane subunit [Rhodobacter sphaeroides ATCC 17029] gi|126106147|gb|ABN78677.1| polar amino acid ABC transporter, inner membrane subunit [Rhodobacter sphaeroides ATCC 17029] Length = 398 Score = 281 bits (718), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 153/385 (39%), Positives = 242/385 (62%), Gaps = 3/385 (0%) Query: 14 SRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEID 73 S LY + QI LA + ++ + NV N+ + N++ G GFL + + FEI Sbjct: 16 SPKDILYSESFRTVVYQIALAAAVALLGFYLYQNVVENLARQNIATGFGFLGQVSQFEIG 75 Query: 74 QGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYV 133 + ++ Y++ +Y A+ VG +NT ++ +G++ AT+IG VG R+S+N L+ + YV Sbjct: 76 ETLIAYSARDTYGRALAVGLMNTLSVSAAGIVVATVIGFSVGIARVSSNWLLQRLATAYV 135 Query: 134 EVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGM-FLNNRGLSFPTLTMDTNAKIFVF 192 E+ RNIP ++ + F + +V+ LP P ++ L +GM FL+NRGL+F + + Sbjct: 136 EIVRNIPVILQVIF-WAAVIRNLPAPRQAVEL-WGMGFLSNRGLTFAMPSAHAAHLWMLA 193 Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252 + V GI L++ A+ ++ E TG+ + +L+ LI GLP LV + P Sbjct: 194 ALVAGIALAILASHKAKRHREATGRYIDMLWPCVGLIVGLPLLVWLGFGAPHEISFPERR 253 Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312 FNF GG+T+SPEF++L +S Y++ FIAEIVR+G+ A PRGQ+EAA ++ L R R Sbjct: 254 GFNFAGGATISPEFVALMTGISLYSSGFIAEIVRAGIQATPRGQVEAARSIALRPRFILR 313 Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372 V+LPQA+R I+PPLTSQY++L+KNSS+AV +G+ DLV++G T++NQTGQA+E I + M Sbjct: 314 YVVLPQALRVIVPPLTSQYVSLIKNSSIAVVIGYPDLVNIGNTVMNQTGQAVEAIAVMML 373 Query: 373 IYLSLSIMIALFMNRLNAKIALKEK 397 +YL +S++ +L MN N +A+KE+ Sbjct: 374 VYLIVSLVTSLLMNFYNRLVAIKER 398 >gi|324020752|gb|EGB89971.1| ABC transporter, permease protein [Escherichia coli MS 117-3] Length = 399 Score = 281 bits (718), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 158/369 (42%), Positives = 228/369 (61%), Gaps = 1/369 (0%) Query: 30 QIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAI 89 QI+ + + I W +N N+ ++ G FL AGF I Q ++ Y +Y Sbjct: 31 QILAVVAVVGIVGWLFHNTVTNLSNRGITSGFAFLDRGAGFGIVQHLIDYQQGDTYGRVF 90 Query: 90 LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 +VG +NT ++ ++ A+++G +G RLS N L+ + +Y+E+FRNIPPL+ IFF Y Sbjct: 91 IVGLLNTLLVSALCIVFASVLGFFIGLARLSDNWLLRKLSTIYIEIFRNIPPLLQIFFWY 150 Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209 +VL LP P ++ FL+NRGL P+ + F+ + V+ IVLS+ R ++ Sbjct: 151 FAVLRNLPGPRQAVSAFDLAFLSNRGLYIPSPQLGDGFIAFILAVVMAIVLSVGLFRFNK 210 Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269 + KTG+ I+ LI GLP L LH+D P L FNF GG + PE +L Sbjct: 211 TYQIKTGQLRRTWPIAAVLIIGLPLLAQWLFGAALHWDVPALRGFNFRGGMVLIPELAAL 270 Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329 +ALS YT+AFIAEI+R+G+ AVP GQ EAA +LGL + R V++PQA+R IIPPLTS Sbjct: 271 TLALSVYTSAFIAEIIRAGIQAVPYGQHEAARSLGLPNPVTLRQVIIPQALRVIIPPLTS 330 Query: 330 QYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388 QYLN++KNSSLA A+G+ D+VS+ GT++NQTGQAIE I + M +YL +S+ I+L MN Sbjct: 331 QYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAMTMSVYLIISLTISLLMNIY 390 Query: 389 NAKIALKEK 397 N +IA+ E+ Sbjct: 391 NRRIAIVER 399 >gi|300817473|ref|ZP_07097689.1| ABC transporter, permease protein [Escherichia coli MS 107-1] gi|300904465|ref|ZP_07122311.1| ABC transporter, permease protein [Escherichia coli MS 84-1] gi|300916766|ref|ZP_07133476.1| ABC transporter, permease protein [Escherichia coli MS 115-1] gi|300946949|ref|ZP_07161180.1| ABC transporter, permease protein [Escherichia coli MS 116-1] gi|300958249|ref|ZP_07170396.1| ABC transporter, permease protein [Escherichia coli MS 175-1] gi|301304262|ref|ZP_07210376.1| ABC transporter, permease protein [Escherichia coli MS 124-1] gi|301326287|ref|ZP_07219660.1| ABC transporter, permease protein [Escherichia coli MS 78-1] gi|301647045|ref|ZP_07246877.1| ABC transporter, permease protein [Escherichia coli MS 146-1] gi|309793850|ref|ZP_07688276.1| ABC transporter, permease protein [Escherichia coli MS 145-7] gi|331643969|ref|ZP_08345100.1| putative amino-acid ABC transporter permease protein YhdX [Escherichia coli H736] gi|331679343|ref|ZP_08380015.1| putative amino-acid ABC transporter permease protein YhdX [Escherichia coli H591] gi|300315067|gb|EFJ64851.1| ABC transporter, permease protein [Escherichia coli MS 175-1] gi|300403627|gb|EFJ87165.1| ABC transporter, permease protein [Escherichia coli MS 84-1] gi|300415952|gb|EFJ99262.1| ABC transporter, permease protein [Escherichia coli MS 115-1] gi|300453409|gb|EFK17029.1| ABC transporter, permease protein [Escherichia coli MS 116-1] gi|300529771|gb|EFK50833.1| ABC transporter, permease protein [Escherichia coli MS 107-1] gi|300840388|gb|EFK68148.1| ABC transporter, permease protein [Escherichia coli MS 124-1] gi|300846988|gb|EFK74748.1| ABC transporter, permease protein [Escherichia coli MS 78-1] gi|301074795|gb|EFK89601.1| ABC transporter, permease protein [Escherichia coli MS 146-1] gi|308122807|gb|EFO60069.1| ABC transporter, permease protein [Escherichia coli MS 145-7] gi|315137852|dbj|BAJ45011.1| putative amino-acid transporter subunit [Escherichia coli DH1] gi|315257197|gb|EFU37165.1| ABC transporter, permease protein [Escherichia coli MS 85-1] gi|331037440|gb|EGI09664.1| putative amino-acid ABC transporter permease protein YhdX [Escherichia coli H736] gi|331073408|gb|EGI44731.1| putative amino-acid ABC transporter permease protein YhdX [Escherichia coli H591] Length = 399 Score = 281 bits (718), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 158/369 (42%), Positives = 228/369 (61%), Gaps = 1/369 (0%) Query: 30 QIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAI 89 QI+ + + I W +N N+ ++ G FL AGF I Q ++ Y +Y Sbjct: 31 QILAVVAVVGIVGWLFHNTVTNLNNRGITSGFAFLDRGAGFGIVQHLIDYQQGDTYGRVF 90 Query: 90 LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 +VG +NT ++ ++ A+++G +G RLS N L+ + +Y+E+FRNIPPL+ IFF Y Sbjct: 91 IVGLLNTLLVSALCIVFASVLGFFIGLARLSDNWLLRKLSTIYIEIFRNIPPLLQIFFWY 150 Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209 +VL LP P ++ FL+NRGL P+ + F+ + V+ IVLS+ R ++ Sbjct: 151 FAVLRNLPGPRQAVSAFDLAFLSNRGLYIPSPQLGDGFIAFILAVVMAIVLSVGLFRFNK 210 Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269 + KTG+ I+ LI GLP L LH+D P L FNF GG + PE +L Sbjct: 211 TYQIKTGQLRRTWPIAAVLIIGLPLLAQWLFGAALHWDVPALRGFNFRGGMVLIPELAAL 270 Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329 +ALS YT+AFIAEI+R+G+ AVP GQ EAA +LGL + R V++PQA+R IIPPLTS Sbjct: 271 TLALSVYTSAFIAEIIRAGIQAVPYGQHEAARSLGLPNPVTLRQVIIPQALRVIIPPLTS 330 Query: 330 QYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388 QYLN++KNSSLA A+G+ D+VS+ GT++NQTGQAIE I + M +YL +S+ I+L MN Sbjct: 331 QYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAMTMSVYLIISLTISLLMNIY 390 Query: 389 NAKIALKEK 397 N +IA+ E+ Sbjct: 391 NRRIAIVER 399 >gi|15803804|ref|NP_289838.1| putative transport system permease protein [Escherichia coli O157:H7 EDL933] gi|38704157|ref|NP_312169.2| transport system permease protein [Escherichia coli O157:H7 str. Sakai] gi|168758501|ref|ZP_02783508.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Escherichia coli O157:H7 str. EC4401] gi|168764868|ref|ZP_02789875.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Escherichia coli O157:H7 str. EC4501] gi|168777687|ref|ZP_02802694.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Escherichia coli O157:H7 str. EC4196] gi|168802617|ref|ZP_02827624.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Escherichia coli O157:H7 str. EC508] gi|188025287|ref|ZP_02777415.2| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Escherichia coli O157:H7 str. EC4113] gi|189010706|ref|ZP_02808847.2| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Escherichia coli O157:H7 str. EC4076] gi|189403224|ref|ZP_02794142.2| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Escherichia coli O157:H7 str. EC4486] gi|189404774|ref|ZP_02811171.2| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Escherichia coli O157:H7 str. EC869] gi|195940013|ref|ZP_03085395.1| putative transport system permease protein [Escherichia coli O157:H7 str. EC4024] gi|208808155|ref|ZP_03250492.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Escherichia coli O157:H7 str. EC4206] gi|208814005|ref|ZP_03255334.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Escherichia coli O157:H7 str. EC4045] gi|208821360|ref|ZP_03261680.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Escherichia coli O157:H7 str. EC4042] gi|209398125|ref|YP_002272731.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Escherichia coli O157:H7 str. EC4115] gi|217327751|ref|ZP_03443834.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Escherichia coli O157:H7 str. TW14588] gi|254795211|ref|YP_003080048.1| putative amino-acid ABC transporter membrane protein [Escherichia coli O157:H7 str. TW14359] gi|291284636|ref|YP_003501454.1| Amino acid ABC transporter permease protein, His/Glu/Gln/Arg/opine family [Escherichia coli O55:H7 str. CB9615] gi|293416694|ref|ZP_06659333.1| general L-amino acid transport system permease [Escherichia coli B185] gi|12517900|gb|AAG58398.1|AE005554_9 putative transport system permease protein [Escherichia coli O157:H7 str. EDL933] gi|187767136|gb|EDU30980.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Escherichia coli O157:H7 str. EC4196] gi|188013746|gb|EDU51868.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Escherichia coli O157:H7 str. EC4113] gi|188998882|gb|EDU67868.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Escherichia coli O157:H7 str. EC4076] gi|189354692|gb|EDU73111.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Escherichia coli O157:H7 str. EC4401] gi|189361801|gb|EDU80220.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Escherichia coli O157:H7 str. EC4486] gi|189365199|gb|EDU83615.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Escherichia coli O157:H7 str. EC4501] gi|189373997|gb|EDU92413.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Escherichia coli O157:H7 str. EC869] gi|189375430|gb|EDU93846.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Escherichia coli O157:H7 str. EC508] gi|208727956|gb|EDZ77557.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Escherichia coli O157:H7 str. EC4206] gi|208735282|gb|EDZ83969.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Escherichia coli O157:H7 str. EC4045] gi|208741483|gb|EDZ89165.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Escherichia coli O157:H7 str. EC4042] gi|209159525|gb|ACI36958.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Escherichia coli O157:H7 str. EC4115] gi|217320118|gb|EEC28543.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Escherichia coli O157:H7 str. TW14588] gi|254594611|gb|ACT73972.1| predicted amino-acid transporter subunit, membrane component of ABC superfamily [Escherichia coli O157:H7 str. TW14359] gi|290764509|gb|ADD58470.1| Amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Escherichia coli O55:H7 str. CB9615] gi|291432050|gb|EFF05033.1| general L-amino acid transport system permease [Escherichia coli B185] gi|320189618|gb|EFW64277.1| Glutamate Aspartate transport system permease protein GltJ [Escherichia coli O157:H7 str. EC1212] gi|320639915|gb|EFX09506.1| Amino acid ABC transporter permease protein, His/Glu/Gln/Arg/opine family [Escherichia coli O157:H7 str. G5101] gi|320645631|gb|EFX14640.1| Amino acid ABC transporter permease protein, His/Glu/Gln/Arg/opine family [Escherichia coli O157:H- str. 493-89] gi|320650941|gb|EFX19398.1| Amino acid ABC transporter permease protein, His/Glu/Gln/Arg/opine family [Escherichia coli O157:H- str. H 2687] gi|320656322|gb|EFX24234.1| Amino acid ABC transporter permease protein, His/Glu/Gln/Arg/opine family [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320662012|gb|EFX29420.1| Amino acid ABC transporter permease protein, His/Glu/Gln/Arg/opine family [Escherichia coli O55:H7 str. USDA 5905] gi|320666848|gb|EFX33827.1| Amino acid ABC transporter permease protein, His/Glu/Gln/Arg/opine family [Escherichia coli O157:H7 str. LSU-61] gi|326337966|gb|EGD61800.1| Glutamate Aspartate transport system permease protein GltJ [Escherichia coli O157:H7 str. 1125] gi|326347535|gb|EGD71260.1| Glutamate Aspartate transport system permease protein GltJ [Escherichia coli O157:H7 str. 1044] Length = 393 Score = 281 bits (718), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 158/369 (42%), Positives = 228/369 (61%), Gaps = 1/369 (0%) Query: 30 QIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAI 89 QI+ + + I W +N N+ ++ G FL AGF I Q ++ Y +Y Sbjct: 25 QILAVVAVVGIVGWLFHNTVTNLNNRGITSGFAFLDRGAGFGIVQHLIDYQQGDTYGRVF 84 Query: 90 LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 +VG +NT ++ ++ A+++G +G RLS N L+ + +Y+E+FRNIPPL+ IFF Y Sbjct: 85 IVGLLNTLLVSALCIVFASVLGFFIGLARLSDNWLLRKLSTIYIEIFRNIPPLLQIFFWY 144 Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209 +VL LP P ++ FL+NRGL P+ + F+ + V+ IVLS+ R ++ Sbjct: 145 FAVLRNLPGPRQAVSAFDLAFLSNRGLYIPSPQLGDGFIAFILAVVMAIVLSVGLFRFNK 204 Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269 + KTG+ I+ LI GLP L LH+D P L FNF GG + PE +L Sbjct: 205 TYQIKTGQLRRTWPIAAVLIIGLPLLAQWLFGAALHWDVPALQGFNFRGGMVLIPELAAL 264 Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329 +ALS YT+AFIAEI+R+G+ AVP GQ EAA +LGL + R V++PQA+R IIPPLTS Sbjct: 265 TLALSVYTSAFIAEIIRAGIQAVPYGQHEAARSLGLPNPVTLRQVIIPQALRVIIPPLTS 324 Query: 330 QYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388 QYLN++KNSSLA A+G+ D+VS+ GT++NQTGQAIE I + M +YL +S+ I+L MN Sbjct: 325 QYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAMTMSVYLIISLTISLLMNIY 384 Query: 389 NAKIALKEK 397 N +IA+ E+ Sbjct: 385 NRRIAIVER 393 >gi|300824983|ref|ZP_07105082.1| ABC transporter, permease protein [Escherichia coli MS 119-7] gi|300522549|gb|EFK43618.1| ABC transporter, permease protein [Escherichia coli MS 119-7] Length = 399 Score = 281 bits (718), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 158/369 (42%), Positives = 228/369 (61%), Gaps = 1/369 (0%) Query: 30 QIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAI 89 QI+ + + I W +N N+ ++ G FL AGF I Q ++ Y +Y Sbjct: 31 QILAVVAVVGIVGWLFHNTVTNLNNRGITSGFAFLDRGAGFGIVQHLIDYQQGDTYGCVF 90 Query: 90 LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 +VG +NT ++ ++ A+++G +G RLS N L+ + +Y+E+FRNIPPL+ IFF Y Sbjct: 91 IVGLLNTLLVSALCIVFASVLGFFIGLARLSDNWLLRKLSTIYIEIFRNIPPLLQIFFWY 150 Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209 +VL LP P ++ FL+NRGL P+ + F+ + V+ IVLS+ R ++ Sbjct: 151 FAVLRNLPGPRQAVSAFDLAFLSNRGLYIPSPQLGDGFIAFILAVVMAIVLSVGLFRFNK 210 Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269 + KTG+ I+ LI GLP L LH+D P L FNF GG + PE +L Sbjct: 211 TYQIKTGQLRRTWPIAAVLIIGLPLLAQWLFGAALHWDVPALRGFNFRGGMVLIPELAAL 270 Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329 +ALS YT+AFIAEI+R+G+ AVP GQ EAA +LGL + R V++PQA+R IIPPLTS Sbjct: 271 TLALSVYTSAFIAEIIRAGIQAVPYGQHEAARSLGLPNPVTLRQVIIPQALRVIIPPLTS 330 Query: 330 QYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388 QYLN++KNSSLA A+G+ D+VS+ GT++NQTGQAIE I + M +YL +S+ I+L MN Sbjct: 331 QYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAMTMSVYLIISLTISLLMNIY 390 Query: 389 NAKIALKEK 397 N +IA+ E+ Sbjct: 391 NRRIAIVER 399 >gi|49176333|ref|YP_026209.1| predicted amino-acid transporter subunit [Escherichia coli str. K-12 substr. MG1655] gi|89110029|ref|AP_003809.1| predicted amino-acid transporter subunit [Escherichia coli str. K-12 substr. W3110] gi|157158458|ref|YP_001464744.1| His/Glu/Gln/Arg/opine ABC transporter permease [Escherichia coli E24377A] gi|170018488|ref|YP_001723442.1| polar amino acid ABC transporter, inner membrane subunit [Escherichia coli ATCC 8739] gi|170082797|ref|YP_001732117.1| amino-acid ABC transporter membrane protein [Escherichia coli str. K-12 substr. DH10B] gi|188494856|ref|ZP_03002126.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Escherichia coli 53638] gi|191169155|ref|ZP_03030913.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Escherichia coli B7A] gi|193066460|ref|ZP_03047505.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Escherichia coli E22] gi|193071518|ref|ZP_03052428.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Escherichia coli E110019] gi|194430243|ref|ZP_03062740.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Escherichia coli B171] gi|218696969|ref|YP_002404636.1| amino-acid transporter subunit ; membrane component of ABC superfamily [Escherichia coli 55989] gi|238902367|ref|YP_002928163.1| putative amino-acid transporter subunit [Escherichia coli BW2952] gi|254038435|ref|ZP_04872493.1| amino acid ABC transporter [Escherichia sp. 1_1_43] gi|256018817|ref|ZP_05432682.1| putative amino-acid transporter subunit [Shigella sp. D9] gi|256024157|ref|ZP_05438022.1| putative amino-acid transporter subunit [Escherichia sp. 4_1_40B] gi|260846074|ref|YP_003223852.1| putative transport system permease protein [Escherichia coli O103:H2 str. 12009] gi|301028301|ref|ZP_07191561.1| ABC transporter, permease protein [Escherichia coli MS 196-1] gi|307139957|ref|ZP_07499313.1| putative transport system permease protein [Escherichia coli H736] gi|307314973|ref|ZP_07594561.1| polar amino acid ABC transporter, inner membrane subunit [Escherichia coli W] gi|312972462|ref|ZP_07786636.1| general L-amino acid transport system permease protein aapQ [Escherichia coli 1827-70] gi|54042337|sp|P45767|YHDX_ECOLI RecName: Full=Putative amino-acid ABC transporter permease protein yhdX gi|48994930|gb|AAT48174.1| predicted amino-acid transporter subunit [Escherichia coli str. K-12 substr. MG1655] gi|85676060|dbj|BAE77310.1| predicted amino-acid transporter subunit [Escherichia coli str. K12 substr. W3110] gi|157080488|gb|ABV20196.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Escherichia coli E24377A] gi|169753416|gb|ACA76115.1| polar amino acid ABC transporter, inner membrane subunit [Escherichia coli ATCC 8739] gi|169890632|gb|ACB04339.1| predicted amino-acid transporter subunit; membrane component of ABC superfamily [Escherichia coli str. K-12 substr. DH10B] gi|188490055|gb|EDU65158.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Escherichia coli 53638] gi|190900797|gb|EDV60588.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Escherichia coli B7A] gi|192925889|gb|EDV80538.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Escherichia coli E22] gi|192955155|gb|EDV85648.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Escherichia coli E110019] gi|194411714|gb|EDX28039.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Escherichia coli B171] gi|218353701|emb|CAU99964.1| amino-acid transporter subunit ; membrane component of ABC superfamily [Escherichia coli 55989] gi|226840059|gb|EEH72080.1| amino acid ABC transporter [Escherichia sp. 1_1_43] gi|238862152|gb|ACR64150.1| predicted amino-acid transporter subunit [Escherichia coli BW2952] gi|257761221|dbj|BAI32718.1| putative transport system permease protein [Escherichia coli O103:H2 str. 12009] gi|260447705|gb|ACX38127.1| polar amino acid ABC transporter, inner membrane subunit [Escherichia coli DH1] gi|299878644|gb|EFI86855.1| ABC transporter, permease protein [Escherichia coli MS 196-1] gi|306905556|gb|EFN36088.1| polar amino acid ABC transporter, inner membrane subunit [Escherichia coli W] gi|310334839|gb|EFQ01044.1| general L-amino acid transport system permease protein aapQ [Escherichia coli 1827-70] gi|315062568|gb|ADT76895.1| predicted amino-acid transporter subunit [Escherichia coli W] gi|315617079|gb|EFU97689.1| general L-amino acid transport system permease protein aapQ [Escherichia coli 3431] gi|323162954|gb|EFZ48789.1| general L-amino acid transport system permease protein aapQ [Escherichia coli E128010] gi|323376845|gb|ADX49113.1| polar amino acid ABC transporter, inner membrane subunit [Escherichia coli KO11] gi|323936247|gb|EGB32539.1| inner membrane transport system [Escherichia coli E1520] gi|323941638|gb|EGB37817.1| inner membrane transport system [Escherichia coli E482] gi|332102249|gb|EGJ05595.1| his/Glu/Gln/Arg/opine ABC transporter permease [Shigella sp. D9] Length = 393 Score = 281 bits (718), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 158/369 (42%), Positives = 228/369 (61%), Gaps = 1/369 (0%) Query: 30 QIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAI 89 QI+ + + I W +N N+ ++ G FL AGF I Q ++ Y +Y Sbjct: 25 QILAVVAVVGIVGWLFHNTVTNLNNRGITSGFAFLDRGAGFGIVQHLIDYQQGDTYGRVF 84 Query: 90 LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 +VG +NT ++ ++ A+++G +G RLS N L+ + +Y+E+FRNIPPL+ IFF Y Sbjct: 85 IVGLLNTLLVSALCIVFASVLGFFIGLARLSDNWLLRKLSTIYIEIFRNIPPLLQIFFWY 144 Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209 +VL LP P ++ FL+NRGL P+ + F+ + V+ IVLS+ R ++ Sbjct: 145 FAVLRNLPGPRQAVSAFDLAFLSNRGLYIPSPQLGDGFIAFILAVVMAIVLSVGLFRFNK 204 Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269 + KTG+ I+ LI GLP L LH+D P L FNF GG + PE +L Sbjct: 205 TYQIKTGQLRRTWPIAAVLIIGLPLLAQWLFGAALHWDVPALRGFNFRGGMVLIPELAAL 264 Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329 +ALS YT+AFIAEI+R+G+ AVP GQ EAA +LGL + R V++PQA+R IIPPLTS Sbjct: 265 TLALSVYTSAFIAEIIRAGIQAVPYGQHEAARSLGLPNPVTLRQVIIPQALRVIIPPLTS 324 Query: 330 QYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388 QYLN++KNSSLA A+G+ D+VS+ GT++NQTGQAIE I + M +YL +S+ I+L MN Sbjct: 325 QYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAMTMSVYLIISLTISLLMNIY 384 Query: 389 NAKIALKEK 397 N +IA+ E+ Sbjct: 385 NRRIAIVER 393 >gi|237799856|ref|ZP_04588317.1| polar amino acid ABC transporter, inner membrane subunit [Pseudomonas syringae pv. oryzae str. 1_6] gi|331022711|gb|EGI02768.1| polar amino acid ABC transporter, inner membrane subunit [Pseudomonas syringae pv. oryzae str. 1_6] Length = 393 Score = 281 bits (718), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 156/380 (41%), Positives = 233/380 (61%), Gaps = 1/380 (0%) Query: 19 LYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVP 78 L D +V QII + + + + +N N++ ++ G GFL AGF I Q ++ Sbjct: 14 LSDPKVRAWLFQIITVVAVISLGWFIFDNTQTNLQHRGITSGFGFLENSAGFGIAQHLID 73 Query: 79 YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138 YT +YA ++G +NT ++ G++ AT++G ++G RLS N +++ + VYVEVFRN Sbjct: 74 YTESDTYARVFVIGLLNTLLVSVIGIVLATLLGFIIGVARLSPNWMISKLATVYVEVFRN 133 Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198 IPPL+ I F Y +V LP P + F+++RGL+ P A F+ S V+ + Sbjct: 134 IPPLLQILFWYTAVFLTLPGPRQAHGYLDMFFVSSRGLNMPRALPAEGAWAFLISLVVAV 193 Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258 + + R + E TG+ ++ L+ +P L ++ +H++ P L FNF G Sbjct: 194 IAIVMMVRWANKRFEATGQPFHKFWVGLALLLVIPGLSMLIFGSPVHWELPQLKGFNFTG 253 Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G + PE +SL +AL+ YTAAFIAEIVRSG+ +V GQ EAA +LGL R V++PQ Sbjct: 254 GWVLIPELISLTLALTIYTAAFIAEIVRSGIKSVSHGQTEAARSLGLRPGPTLRKVIIPQ 313 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSL 377 A+R IIPPLTSQ+LNL KNSSLA A+G+ ++VS+ GT++NQTGQAIE+I I M +YL++ Sbjct: 314 ALRVIIPPLTSQFLNLAKNSSLAAAIGYPEMVSLFAGTVLNQTGQAIEVIAITMSVYLAI 373 Query: 378 SIMIALFMNRLNAKIALKEK 397 SI I++ MN N +IAL E+ Sbjct: 374 SISISMLMNWYNKRIALIER 393 >gi|330950964|gb|EGH51224.1| polar amino acid ABC transporter, inner membrane subunit [Pseudomonas syringae Cit 7] Length = 393 Score = 280 bits (717), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 157/380 (41%), Positives = 233/380 (61%), Gaps = 1/380 (0%) Query: 19 LYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVP 78 L D +V QII + + + + +N N++ ++ G GFL AGF I Q ++ Sbjct: 14 LSDPKVRAWLFQIITVVAVIALGWFIFDNTQTNLQHRGITSGFGFLENSAGFGIAQHLID 73 Query: 79 YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138 Y+ SYA ++G +NT ++ G++ AT++G ++G RLS N +++ + VYVEVFRN Sbjct: 74 YSEADSYARVFVIGLLNTLLVSVIGIVLATLLGFVIGVARLSPNWMISKLATVYVEVFRN 133 Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198 IPPL+ I F Y +V LP P + F+++RGL+ P A F+ S V+ + Sbjct: 134 IPPLLQILFWYTAVFLTLPGPRQAHGYLDMFFVSSRGLNMPRALPAEGAWAFLVSLVVAV 193 Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258 + + R + E TG+ ++ L+ +P L ++ +H++ P L FNF G Sbjct: 194 IAIVMMVRWANKRFEATGQPFHKFWVGLALLLVIPGLSMLIFGSPVHWELPQLKGFNFTG 253 Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G + PE +SL +AL+ YTAAFIAEIVRSG+ +V GQ EAA +LGL R V++PQ Sbjct: 254 GWVLIPELISLTLALTIYTAAFIAEIVRSGIKSVSHGQTEAARSLGLRPGPTLRKVIIPQ 313 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSL 377 A+R IIPPLTSQ+LNL KNSSLA A+G+ ++VS+ GT++NQTGQAIE+I I M +YL++ Sbjct: 314 ALRVIIPPLTSQFLNLAKNSSLAAAIGYPEMVSLFAGTVLNQTGQAIEVIAITMSVYLAI 373 Query: 378 SIMIALFMNRLNAKIALKEK 397 SI I+L MN N +IAL E+ Sbjct: 374 SISISLLMNWYNKRIALIER 393 >gi|300979704|ref|ZP_07174654.1| ABC transporter, permease protein [Escherichia coli MS 200-1] gi|300307922|gb|EFJ62442.1| ABC transporter, permease protein [Escherichia coli MS 200-1] gi|324009099|gb|EGB78318.1| ABC transporter, permease protein [Escherichia coli MS 57-2] gi|324015879|gb|EGB85098.1| ABC transporter, permease protein [Escherichia coli MS 60-1] Length = 399 Score = 280 bits (717), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 158/369 (42%), Positives = 228/369 (61%), Gaps = 1/369 (0%) Query: 30 QIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAI 89 QI+ + + I W +N N+ ++ G FL AGF I Q ++ Y +Y Sbjct: 31 QILAVVAVVGIIGWLFHNTVTNLSNRGITSGFAFLDRGAGFGIVQHLIDYQQGDTYGRVF 90 Query: 90 LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 +VG +NT ++ ++ A+++G +G RLS N L+ + +Y+E+FRNIPPL+ IFF Y Sbjct: 91 IVGLLNTLLVSALCIVFASVLGFFIGLARLSDNWLLRKLSTIYIEIFRNIPPLLQIFFWY 150 Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209 +VL LP P ++ +FL+NRGL P+ + F+ + V+ IVLS+ R ++ Sbjct: 151 FAVLRNLPGPRQAVSALDLVFLSNRGLYIPSPQLGDGFLAFILAVVIAIVLSVGLFRFNK 210 Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269 KTG+ I+ LI GLP L LH+D P L FNF GG + PE +L Sbjct: 211 THQIKTGQLRRTWPIAAVLIIGLPLLAQWLFGAALHWDVPALRGFNFRGGMVLIPELAAL 270 Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329 +ALS YT+AFIAEI+R+G+ AVP GQ EAA +LGL + R V++PQA+R IIPPLTS Sbjct: 271 TLALSVYTSAFIAEIIRAGIQAVPYGQHEAARSLGLPNPVTLRQVIIPQALRVIIPPLTS 330 Query: 330 QYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388 QYLN++KNSSLA A+G+ D+VS+ GT++NQTGQAIE I + M +YL +S+ I+L MN Sbjct: 331 QYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAMTMSVYLIISLTISLLMNIY 390 Query: 389 NAKIALKEK 397 N +IA+ E+ Sbjct: 391 NRRIAIVER 399 >gi|170682235|ref|YP_001745539.1| His/Glu/Gln/Arg/opine ABC transporter permease [Escherichia coli SMS-3-5] gi|194435092|ref|ZP_03067329.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Shigella dysenteriae 1012] gi|209920742|ref|YP_002294826.1| amino acid ABC transporter permease [Escherichia coli SE11] gi|218555834|ref|YP_002388747.1| amino-acid ABC transporter membrane protein [Escherichia coli IAI1] gi|260870020|ref|YP_003236422.1| putative transport system permease protein [Escherichia coli O111:H- str. 11128] gi|293449592|ref|ZP_06664013.1| general L-amino acid transport system permease [Escherichia coli B088] gi|170519953|gb|ACB18131.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Escherichia coli SMS-3-5] gi|194416654|gb|EDX32786.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Shigella dysenteriae 1012] gi|209914001|dbj|BAG79075.1| amino acid ABC transporter permease component [Escherichia coli SE11] gi|218362602|emb|CAR00227.1| amino-acid transporter subunit ; membrane component of ABC superfamily [Escherichia coli IAI1] gi|257766376|dbj|BAI37871.1| putative transport system permease protein [Escherichia coli O111:H- str. 11128] gi|291322682|gb|EFE62111.1| general L-amino acid transport system permease [Escherichia coli B088] gi|320181543|gb|EFW56461.1| Glutamate Aspartate transport system permease protein GltJ [Shigella boydii ATCC 9905] gi|323173471|gb|EFZ59100.1| general L-amino acid transport system permease protein aapQ [Escherichia coli LT-68] gi|323178550|gb|EFZ64126.1| general L-amino acid transport system permease protein aapQ [Escherichia coli 1180] gi|323183029|gb|EFZ68428.1| general L-amino acid transport system permease protein aapQ [Escherichia coli 1357] gi|323946884|gb|EGB42900.1| inner membrane transport system [Escherichia coli H120] gi|324119449|gb|EGC13332.1| inner membrane transport system [Escherichia coli E1167] gi|332086493|gb|EGI91640.1| general L-amino acid transport system permease protein aapQ [Shigella dysenteriae 155-74] gi|332087262|gb|EGI92395.1| general L-amino acid transport system permease protein aapQ [Shigella boydii 5216-82] Length = 393 Score = 280 bits (717), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 158/369 (42%), Positives = 228/369 (61%), Gaps = 1/369 (0%) Query: 30 QIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAI 89 QI+ + + I W +N N+ ++ G FL AGF I Q ++ Y +Y Sbjct: 25 QILAVVAVVGIVGWLFHNTVTNLSNRGITSGFAFLDRGAGFGIVQHLIDYQQGDTYGRVF 84 Query: 90 LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 +VG +NT ++ ++ A+++G +G RLS N L+ + +Y+E+FRNIPPL+ IFF Y Sbjct: 85 IVGLLNTLLVSALCIVFASVLGFFIGLARLSDNWLLRKLSTIYIEIFRNIPPLLQIFFWY 144 Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209 +VL LP P ++ FL+NRGL P+ + F+ + V+ IVLS+ R ++ Sbjct: 145 FAVLRNLPGPRQAVSAFDLAFLSNRGLYIPSPQLGDGFIAFILAVVMAIVLSVGLFRFNK 204 Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269 + KTG+ I+ LI GLP L LH+D P L FNF GG + PE +L Sbjct: 205 TYQIKTGQLRRTWPIAAVLIIGLPLLAQWLFGAALHWDVPALRGFNFRGGMVLIPELAAL 264 Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329 +ALS YT+AFIAEI+R+G+ AVP GQ EAA +LGL + R V++PQA+R IIPPLTS Sbjct: 265 TLALSVYTSAFIAEIIRAGIQAVPYGQHEAARSLGLPNPVTLRQVIIPQALRVIIPPLTS 324 Query: 330 QYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388 QYLN++KNSSLA A+G+ D+VS+ GT++NQTGQAIE I + M +YL +S+ I+L MN Sbjct: 325 QYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAMTMSVYLIISLTISLLMNIY 384 Query: 389 NAKIALKEK 397 N +IA+ E+ Sbjct: 385 NRRIAIVER 393 >gi|309703688|emb|CBJ03029.1| ABC transporter, permease protein [Escherichia coli ETEC H10407] Length = 393 Score = 280 bits (717), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 158/369 (42%), Positives = 228/369 (61%), Gaps = 1/369 (0%) Query: 30 QIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAI 89 QI+ + + I W +N N+ ++ G FL AGF I Q ++ Y +Y Sbjct: 25 QILAVVAVVGIVGWLFHNTVTNLNNRGITSGFAFLDRGAGFGIVQHLIDYQQGDTYGRVF 84 Query: 90 LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 +VG +NT ++ ++ A+++G +G RLS N L+ + +Y+E+FRNIPPL+ IFF Y Sbjct: 85 IVGLLNTLLVSALCIVFASVLGFFIGLARLSDNWLLRKLSTIYIEIFRNIPPLLQIFFWY 144 Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209 +VL LP P ++ FL+NRGL P+ + F+ + V+ IVLS+ R ++ Sbjct: 145 FAVLRNLPGPRQAVSAFDLAFLSNRGLYIPSPQLGDGFIAFILAVVMAIVLSVGLFRFNK 204 Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269 + KTG+ I+ LI GLP L LH+D P L FNF GG + PE +L Sbjct: 205 TYQIKTGQLRRTWPIAAVLIIGLPLLAQWLFGAALHWDVPALRGFNFRGGMVLIPELAAL 264 Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329 +ALS YT+AFIAEI+R+G+ AVP GQ EAA +LGL + R V++PQA+R IIPPLTS Sbjct: 265 TLALSVYTSAFIAEIIRTGIQAVPYGQHEAARSLGLPNPVTLRQVIIPQALRVIIPPLTS 324 Query: 330 QYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388 QYLN++KNSSLA A+G+ D+VS+ GT++NQTGQAIE I + M +YL +S+ I+L MN Sbjct: 325 QYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIEAIAMTMSVYLIISLTISLLMNIY 384 Query: 389 NAKIALKEK 397 N +IA+ E+ Sbjct: 385 NRRIAIVER 393 >gi|26249861|ref|NP_755901.1| amino-acid ABC transporter permease YhdX [Escherichia coli CFT073] gi|227887997|ref|ZP_04005802.1| amino-acid ABC superfamily ATP binding cassette transporter permease protein YhdX [Escherichia coli 83972] gi|300991068|ref|ZP_07179489.1| ABC transporter, permease protein [Escherichia coli MS 45-1] gi|301047874|ref|ZP_07194921.1| ABC transporter, permease protein [Escherichia coli MS 185-1] gi|26110289|gb|AAN82475.1|AE016767_235 Hypothetical amino-acid ABC transporter permease protein yhdX [Escherichia coli CFT073] gi|227835393|gb|EEJ45859.1| amino-acid ABC superfamily ATP binding cassette transporter permease protein YhdX [Escherichia coli 83972] gi|300300217|gb|EFJ56602.1| ABC transporter, permease protein [Escherichia coli MS 185-1] gi|300406989|gb|EFJ90527.1| ABC transporter, permease protein [Escherichia coli MS 45-1] gi|315294822|gb|EFU54165.1| ABC transporter, permease protein [Escherichia coli MS 153-1] gi|315300934|gb|EFU60154.1| ABC transporter, permease protein [Escherichia coli MS 16-3] Length = 399 Score = 280 bits (717), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 158/369 (42%), Positives = 228/369 (61%), Gaps = 1/369 (0%) Query: 30 QIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAI 89 QI+ + + I W +N N+ ++ G FL AGF I Q ++ Y +Y Sbjct: 31 QILAVVAVVGIIGWLFHNTVTNLSNRGITSGFAFLDRGAGFGIVQHLIDYQQGDTYGRVF 90 Query: 90 LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 +VG +NT ++ ++ A+++G +G RLS N L+ + +Y+E+FRNIPPL+ IFF Y Sbjct: 91 IVGLLNTLLVSALCIVFASVLGFFIGLARLSDNWLLRKLSTIYIEIFRNIPPLLQIFFWY 150 Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209 +VL LP P ++ +FL+NRGL P+ + F+ + V+ IVLS+ R ++ Sbjct: 151 FAVLRNLPGPRQAVSALDLVFLSNRGLYIPSPQLGDRFLAFILAVVIAIVLSVGLFRFNK 210 Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269 KTG+ I+ LI GLP L LH+D P L FNF GG + PE +L Sbjct: 211 THQIKTGQLRRTWPIAAVLIIGLPLLAQWLFGAALHWDVPALRGFNFRGGMVLIPELAAL 270 Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329 +ALS YT+AFIAEI+R+G+ AVP GQ EAA +LGL + R V++PQA+R IIPPLTS Sbjct: 271 TLALSVYTSAFIAEIIRAGIQAVPYGQHEAARSLGLPNPVTLRQVIIPQALRVIIPPLTS 330 Query: 330 QYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388 QYLN++KNSSLA A+G+ D+VS+ GT++NQTGQAIE I + M +YL +S+ I+L MN Sbjct: 331 QYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAMTMSVYLIISLTISLLMNIY 390 Query: 389 NAKIALKEK 397 N +IA+ E+ Sbjct: 391 NRRIAIVER 399 >gi|331008999|gb|EGH89055.1| polar amino acid ABC transporter, inner membrane subunit [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 393 Score = 280 bits (717), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 157/380 (41%), Positives = 232/380 (61%), Gaps = 1/380 (0%) Query: 19 LYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVP 78 L D +V QII + + + + +N N++ ++ G GFL AGF I Q ++ Sbjct: 14 LSDPKVRAWLFQIITVVAVIALGWFIFDNTQTNLQHRGITSGFGFLENSAGFGIAQHLID 73 Query: 79 YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138 Y+ SYA ++G +NT ++ G++ AT++G ++G RLS N +++ + VYVEVFRN Sbjct: 74 YSEADSYARVFVIGLLNTLLVSVIGIVLATLLGFVIGVARLSPNWMISKLATVYVEVFRN 133 Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198 IPPL+ I F Y V LP P + F+++RGL+ P A F+ S V+ + Sbjct: 134 IPPLLQILFWYTPVFLTLPGPRQAHGYLDMFFVSSRGLNMPRALPAEGAWAFLISIVVAV 193 Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258 + + R + E TG+ ++ L+ +P L ++ +H++ P L FNF G Sbjct: 194 IAIVMMVRWANKRFEATGQPFHKFWVGLALLLVIPGLSMLVFGSPVHWELPQLKGFNFTG 253 Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G + PE +SL +AL+ YTAAFIAEIVRSG+ +V GQ EAA +LGL R V++PQ Sbjct: 254 GWVLIPELISLTLALTIYTAAFIAEIVRSGIKSVSHGQTEAARSLGLRPGPTLRKVIIPQ 313 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSL 377 A+R IIPPLTSQ+LNL KNSSLA A+G+ ++VS+ GT++NQTGQAIE+I I M +YL++ Sbjct: 314 ALRVIIPPLTSQFLNLAKNSSLAAAIGYPEMVSLFAGTVLNQTGQAIEVIAITMSVYLAI 373 Query: 378 SIMIALFMNRLNAKIALKEK 397 SI I+L MN N +IAL E+ Sbjct: 374 SISISLLMNWYNKRIALIER 393 >gi|90409067|ref|ZP_01217192.1| ABC-type amino acid transport system, permease component [Psychromonas sp. CNPT3] gi|90309824|gb|EAS37984.1| ABC-type amino acid transport system, permease component [Psychromonas sp. CNPT3] Length = 394 Score = 280 bits (717), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 161/369 (43%), Positives = 234/369 (63%), Gaps = 3/369 (0%) Query: 32 ILALLLTVIFLWC-VNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSD-SSYATAI 89 ++ALL+ V F + NN+++N++ ++ G FL AGF I Q ++PY SSY Sbjct: 26 VVALLIVVFFAYYFANNMFSNVQNRGITTGFSFLEHTAGFGISQTLIPYDDGTSSYLDVF 85 Query: 90 LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 +VG +NT ++ G+ A++IG L+G GRLS+N LVA + VY+E FRNIP L+ I F Y Sbjct: 86 IVGLLNTLLVSVIGVFCASVIGLLIGIGRLSSNFLVAKLSMVYIETFRNIPILLQILFWY 145 Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209 VL+ LP +S+ +FLNNRGL P + + + +F+L F R ++ Sbjct: 146 NIVLAALPSTRNSLNYFDAIFLNNRGLLLPKPLFEDGSGFILSAFILACFSVFFLARWAK 205 Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269 H+ +G+ PLL +S L+ P LV + +H PVL FNF GG + PE ++L Sbjct: 206 KRHDLSGQEFPLLKVSLALLILCPLLVFFIVNQPIHAQYPVLKGFNFQGGLAIIPELLAL 265 Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329 ALS YTA +IAE VR+G+ +V GQ EAA +LGL R V+LPQA+R IIPP+ + Sbjct: 266 IFALSIYTATYIAEAVRAGINSVSTGQKEAAKSLGLKDHVILRKVVLPQALRVIIPPVIN 325 Query: 330 QYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388 QYLNL+KNSSLA A+G+ D+V++ GT +NQ GQAIEIIL+ M +YL +SI+I++ +N + Sbjct: 326 QYLNLVKNSSLATAIGYPDIVTLFSGTTLNQVGQAIEIILMTMAVYLCISIVISVILNWV 385 Query: 389 NAKIALKEK 397 NAK+A+K + Sbjct: 386 NAKMAIKGR 394 >gi|218706884|ref|YP_002414403.1| amino-acid ABC transporter membrane protein [Escherichia coli UMN026] gi|293406871|ref|ZP_06650797.1| polar amino acid ABC transporter [Escherichia coli FVEC1412] gi|298382612|ref|ZP_06992209.1| general L-amino acid transport system permease [Escherichia coli FVEC1302] gi|218433981|emb|CAR14898.1| amino-acid transporter subunit ; membrane component of ABC superfamily [Escherichia coli UMN026] gi|291426877|gb|EFE99909.1| polar amino acid ABC transporter [Escherichia coli FVEC1412] gi|298277752|gb|EFI19268.1| general L-amino acid transport system permease [Escherichia coli FVEC1302] Length = 393 Score = 280 bits (717), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 158/369 (42%), Positives = 228/369 (61%), Gaps = 1/369 (0%) Query: 30 QIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAI 89 QI+ + + I W +N N+ ++ G FL AGF I Q ++ Y +Y Sbjct: 25 QILAVVAVIGIVGWLFHNTVTNLSNRGITSGFAFLDRGAGFGIVQHLIDYQQGDTYGRVF 84 Query: 90 LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 +VG +NT ++ ++ A+++G +G RLS N L+ + +Y+E+FRNIPPL+ IFF Y Sbjct: 85 IVGLLNTLLVSALCIVFASVLGFFIGLARLSDNWLLRKLSTIYIEIFRNIPPLLQIFFWY 144 Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209 +VL LP P ++ FL+NRGL P+ + F+ + V+ IVLS+ R ++ Sbjct: 145 FAVLRNLPGPRQAVSAFDLAFLSNRGLYIPSPQLGDGFIAFILAVVMAIVLSVGLFRFNK 204 Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269 + KTG+ I+ LI GLP L LH+D P L FNF GG + PE +L Sbjct: 205 TYQIKTGQLRRTWPIAAVLIIGLPLLAQWLFGAALHWDVPALRGFNFRGGMVLIPELAAL 264 Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329 +ALS YT+AFIAEI+R+G+ AVP GQ EAA +LGL + R V++PQA+R IIPPLTS Sbjct: 265 TLALSVYTSAFIAEIIRAGIQAVPYGQHEAARSLGLPNPVTLRQVIIPQALRVIIPPLTS 324 Query: 330 QYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388 QYLN++KNSSLA A+G+ D+VS+ GT++NQTGQAIE I + M +YL +S+ I+L MN Sbjct: 325 QYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAMTMSVYLIISLTISLLMNIY 384 Query: 389 NAKIALKEK 397 N +IA+ E+ Sbjct: 385 NRRIAIVER 393 >gi|66044326|ref|YP_234167.1| amino acid ABC transporter permease [Pseudomonas syringae pv. syringae B728a] gi|63255033|gb|AAY36129.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Pseudomonas syringae pv. syringae B728a] Length = 393 Score = 280 bits (717), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 157/380 (41%), Positives = 233/380 (61%), Gaps = 1/380 (0%) Query: 19 LYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVP 78 L D +V QII + + + + +N N++ ++ G GFL AGF I Q ++ Sbjct: 14 LSDPKVRAWLFQIITVVAVIALGWFIFDNTQTNLQHRGITSGFGFLENSAGFGIAQHLID 73 Query: 79 YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138 Y+ SYA ++G +NT ++ G++ AT++G ++G RLS N +++ + VYVEVFRN Sbjct: 74 YSEADSYARVFVIGLLNTLLVSVIGIVLATLLGFVIGVARLSPNWMISKLATVYVEVFRN 133 Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198 IPPL+ I F Y +V LP P + F+++RGL+ P A F+ S V+ + Sbjct: 134 IPPLLQILFWYTAVFLTLPGPRQAHGYLDMFFVSSRGLNMPRALPAEGAWAFLISLVVAV 193 Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258 + + R + E TG+ ++ L+ +P L ++ +H++ P L FNF G Sbjct: 194 IAIVMMVRWANKRFEATGQPFHKFWVGLALLLVIPGLSMLIFGSPVHWELPQLKGFNFSG 253 Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G + PE +SL +AL+ YTAAFIAEIVRSG+ +V GQ EAA +LGL R V++PQ Sbjct: 254 GWVLIPELISLTLALTIYTAAFIAEIVRSGIKSVSHGQTEAARSLGLRPGPTLRKVIIPQ 313 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSL 377 A+R IIPPLTSQ+LNL KNSSLA A+G+ ++VS+ GT++NQTGQAIE+I I M +YL++ Sbjct: 314 ALRVIIPPLTSQFLNLAKNSSLAAAIGYPEMVSLFAGTVLNQTGQAIEVIAITMSVYLAI 373 Query: 378 SIMIALFMNRLNAKIALKEK 397 SI I+L MN N +IAL E+ Sbjct: 374 SISISLLMNWYNKRIALIER 393 >gi|110643515|ref|YP_671245.1| amino acid ABC transporter permease [Escherichia coli 536] gi|191173839|ref|ZP_03035360.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Escherichia coli F11] gi|110345107|gb|ABG71344.1| hypothetical amino-acid ABC transporter permease protein YhdX [Escherichia coli 536] gi|190905889|gb|EDV65507.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Escherichia coli F11] Length = 393 Score = 280 bits (717), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 158/369 (42%), Positives = 228/369 (61%), Gaps = 1/369 (0%) Query: 30 QIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAI 89 QI+ + + I W +N N+ ++ G FL AGF I Q ++ Y +Y Sbjct: 25 QILAVVAVVGIIGWLFHNTVTNLSNRGITSGFAFLDRGAGFGIVQHLIDYQQGDTYGRVF 84 Query: 90 LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 +VG +NT ++ ++ A+++G +G RLS N L+ + +Y+E+FRNIPPL+ IFF Y Sbjct: 85 IVGLLNTLLVSALCIVFASVLGFFIGLARLSDNWLLRKLSTIYIEIFRNIPPLLQIFFWY 144 Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209 +VL LP P ++ +FL+NRGL P+ + F+ + V+ IVLS+ R ++ Sbjct: 145 FAVLRNLPGPRQAVSALDLVFLSNRGLYIPSPQLGDGFLAFILAVVIAIVLSVGLFRFNK 204 Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269 KTG+ I+ LI GLP L LH+D P L FNF GG + PE +L Sbjct: 205 THQIKTGQLRRTWPIAAVLIIGLPLLAQWLFGAALHWDVPALRGFNFRGGMVLIPELAAL 264 Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329 +ALS YT+AFIAEI+R+G+ AVP GQ EAA +LGL + R V++PQA+R IIPPLTS Sbjct: 265 TLALSVYTSAFIAEIIRAGIQAVPYGQHEAARSLGLPNPVTLRQVIIPQALRVIIPPLTS 324 Query: 330 QYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388 QYLN++KNSSLA A+G+ D+VS+ GT++NQTGQAIE I + M +YL +S+ I+L MN Sbjct: 325 QYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAMTMSVYLIISLTISLLMNIY 384 Query: 389 NAKIALKEK 397 N +IA+ E+ Sbjct: 385 NRRIAIVER 393 >gi|307555364|gb|ADN48139.1| amino acid ABC transporter [Escherichia coli ABU 83972] Length = 393 Score = 280 bits (716), Expect = 3e-73, Method: Compositional matrix adjust. Identities = 158/369 (42%), Positives = 228/369 (61%), Gaps = 1/369 (0%) Query: 30 QIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAI 89 QI+ + + I W +N N+ ++ G FL AGF I Q ++ Y +Y Sbjct: 25 QILAVVAVVGIIGWLFHNTVTNLSNRGITSGFAFLDRGAGFGIVQHLIDYQQGDTYGRVF 84 Query: 90 LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 +VG +NT ++ ++ A+++G +G RLS N L+ + +Y+E+FRNIPPL+ IFF Y Sbjct: 85 IVGLLNTLLVSALCIVFASVLGFFIGLARLSDNWLLRKLSTIYIEIFRNIPPLLQIFFWY 144 Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209 +VL LP P ++ +FL+NRGL P+ + F+ + V+ IVLS+ R ++ Sbjct: 145 FAVLRNLPGPRQAVSALDLVFLSNRGLYIPSPQLGDRFLAFILAVVIAIVLSVGLFRFNK 204 Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269 KTG+ I+ LI GLP L LH+D P L FNF GG + PE +L Sbjct: 205 THQIKTGQLRRTWPIAAVLIIGLPLLAQWLFGAALHWDVPALRGFNFRGGMVLIPELAAL 264 Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329 +ALS YT+AFIAEI+R+G+ AVP GQ EAA +LGL + R V++PQA+R IIPPLTS Sbjct: 265 TLALSVYTSAFIAEIIRAGIQAVPYGQHEAARSLGLPNPVTLRQVIIPQALRVIIPPLTS 324 Query: 330 QYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388 QYLN++KNSSLA A+G+ D+VS+ GT++NQTGQAIE I + M +YL +S+ I+L MN Sbjct: 325 QYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAMTMSVYLIISLTISLLMNIY 384 Query: 389 NAKIALKEK 397 N +IA+ E+ Sbjct: 385 NRRIAIVER 393 >gi|218691563|ref|YP_002399775.1| amino-acid ABC transporter membrane protein [Escherichia coli ED1a] gi|218429127|emb|CAR10070.2| amino-acid transporter subunit ; membrane component of ABC superfamily [Escherichia coli ED1a] Length = 393 Score = 280 bits (716), Expect = 3e-73, Method: Compositional matrix adjust. Identities = 158/369 (42%), Positives = 228/369 (61%), Gaps = 1/369 (0%) Query: 30 QIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAI 89 QI+ + + I W +N N+ ++ G FL AGF I Q ++ Y +Y Sbjct: 25 QILAVVAVVGIIGWLFHNTVTNLSNRGITSGFAFLDRGAGFGIVQHLIDYQQGDTYGRVF 84 Query: 90 LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 +VG +NT ++ ++ A+++G +G RLS N L+ + +Y+E+FRNIPPL+ IFF Y Sbjct: 85 IVGLLNTLLVSALCIVFASVLGFFIGLARLSDNWLLRKLSTIYIEIFRNIPPLLQIFFWY 144 Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209 +VL LP P ++ +FL+NRGL P+ + F+ + V+ IVLS+ R ++ Sbjct: 145 FAVLRNLPGPRQAVSALDLVFLSNRGLYIPSPQLGDGFLAFILAVVIAIVLSVGLFRFNK 204 Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269 KTG+ I+ LI GLP L LH+D P L FNF GG + PE +L Sbjct: 205 THQIKTGQLRRTWPITAVLIIGLPLLAQWLFGAALHWDVPALRGFNFRGGMVLIPELAAL 264 Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329 +ALS YT+AFIAEI+R+G+ AVP GQ EAA +LGL + R V++PQA+R IIPPLTS Sbjct: 265 TLALSIYTSAFIAEIIRAGIQAVPYGQHEAARSLGLPNPVTLRRVIIPQALRVIIPPLTS 324 Query: 330 QYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388 QYLN++KNSSLA A+G+ D+VS+ GT++NQTGQAIE I + M +YL +S+ I+L MN Sbjct: 325 QYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAMTMSVYLIISLTISLLMNIY 384 Query: 389 NAKIALKEK 397 N +IA+ E+ Sbjct: 385 NRRIAIVER 393 >gi|218560338|ref|YP_002393251.1| amino-acid transporter subunit ; membrane component of ABC superfamily [Escherichia coli S88] gi|218367107|emb|CAR04881.1| amino-acid transporter subunit ; membrane component of ABC superfamily [Escherichia coli S88] gi|294493510|gb|ADE92266.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Escherichia coli IHE3034] gi|307625130|gb|ADN69434.1| amino-acid transporter subunit ; membrane component of ABC superfamily protein [Escherichia coli UM146] gi|323951211|gb|EGB47086.1| inner membrane transport system [Escherichia coli H252] gi|323957583|gb|EGB53297.1| inner membrane transport system [Escherichia coli H263] Length = 393 Score = 280 bits (716), Expect = 3e-73, Method: Compositional matrix adjust. Identities = 158/369 (42%), Positives = 228/369 (61%), Gaps = 1/369 (0%) Query: 30 QIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAI 89 QI+ + + I W +N N+ ++ G FL AGF I Q ++ Y +Y Sbjct: 25 QILAVVAVVGIIGWLFHNTVTNLSNRGITSGFAFLDRGAGFGIVQHLIDYQQGDTYGRVF 84 Query: 90 LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 +VG +NT ++ ++ A+++G +G RLS N L+ + +Y+E+FRNIPPL+ IFF Y Sbjct: 85 IVGLLNTLLVSALCIVFASVLGFFIGLARLSDNWLLRKLSTIYIEIFRNIPPLLQIFFWY 144 Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209 +VL LP P ++ +FL+NRGL P+ + F+ + V+ IVLS+ R ++ Sbjct: 145 FAVLRNLPGPRQAVSALDLVFLSNRGLYIPSPQLGDGFLAFILAVVIAIVLSVGLFRFNK 204 Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269 KTG+ I+ LI GLP L LH+D P L FNF GG + PE +L Sbjct: 205 THQIKTGQLRRTWPIAAVLIIGLPLLAQWLFGAALHWDVPALRGFNFRGGMVLIPELAAL 264 Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329 +ALS YT+AFIAEI+R+G+ AVP GQ EAA +LGL + R V++PQA+R IIPPLTS Sbjct: 265 TLALSIYTSAFIAEIIRAGIQAVPYGQHEAARSLGLPNPVTLRRVIIPQALRVIIPPLTS 324 Query: 330 QYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388 QYLN++KNSSLA A+G+ D+VS+ GT++NQTGQAIE I + M +YL +S+ I+L MN Sbjct: 325 QYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAMTMSVYLIISLTISLLMNIY 384 Query: 389 NAKIALKEK 397 N +IA+ E+ Sbjct: 385 NRRIAIVER 393 >gi|300925985|ref|ZP_07141808.1| ABC transporter, permease protein [Escherichia coli MS 182-1] gi|300417929|gb|EFK01240.1| ABC transporter, permease protein [Escherichia coli MS 182-1] Length = 399 Score = 280 bits (716), Expect = 3e-73, Method: Compositional matrix adjust. Identities = 158/369 (42%), Positives = 227/369 (61%), Gaps = 1/369 (0%) Query: 30 QIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAI 89 QI+ + + I W +N N+ ++ G FL AGF I Q ++ Y +Y Sbjct: 31 QILAVVAVVGIVGWLFHNTVTNLNNRGITSGFAFLDRGAGFGIVQHLIDYQQGDTYGRVF 90 Query: 90 LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 +VG +NT ++ ++ A+++G +G RLS N L+ + +Y+E+FRNIPPL+ IFF Y Sbjct: 91 IVGLLNTLLVSALCIVFASVLGFFIGLARLSDNWLLRKLSTIYIEIFRNIPPLLQIFFWY 150 Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209 +VL LP P ++ FL+NRGL P+ + F+ + V+ IVLS+ R ++ Sbjct: 151 FAVLRNLPGPRQAVSAFDLAFLSNRGLYIPSPQLGDGFIAFILAVVMAIVLSVGLFRFNK 210 Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269 + KTG+ I+ LI GLP L LH+D P L FNF GG + PE +L Sbjct: 211 TYQIKTGQLRRTWPIAAVLIIGLPLLAQWLFGAALHWDVPALRGFNFRGGMVLIPELAAL 270 Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329 +ALS YT+AFIAEI+R+G+ AVP GQ EAA +LGL + R V++PQA R IIPPLTS Sbjct: 271 TLALSVYTSAFIAEIIRAGIQAVPYGQHEAARSLGLPNPVTLRQVIIPQARRVIIPPLTS 330 Query: 330 QYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388 QYLN++KNSSLA A+G+ D+VS+ GT++NQTGQAIE I + M +YL +S+ I+L MN Sbjct: 331 QYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAMTMSVYLIISLTISLLMNIY 390 Query: 389 NAKIALKEK 397 N +IA+ E+ Sbjct: 391 NRRIAIVER 399 >gi|91212700|ref|YP_542686.1| amino acid ABC transporter permease [Escherichia coli UTI89] gi|117625558|ref|YP_858881.1| putative amino-acid ABC transporter permease protein yhdX [Escherichia coli APEC O1] gi|237705972|ref|ZP_04536453.1| amino acid ABC transporter permease [Escherichia sp. 3_2_53FAA] gi|91074274|gb|ABE09155.1| hypothetical amino-acid ABC transporter permease protein yhdX [Escherichia coli UTI89] gi|115514682|gb|ABJ02757.1| putative amino-acid ABC transporter permease protein yhdX [Escherichia coli APEC O1] gi|226899012|gb|EEH85271.1| amino acid ABC transporter permease [Escherichia sp. 3_2_53FAA] gi|315289023|gb|EFU48421.1| ABC transporter, permease protein [Escherichia coli MS 110-3] Length = 399 Score = 280 bits (716), Expect = 3e-73, Method: Compositional matrix adjust. Identities = 158/369 (42%), Positives = 228/369 (61%), Gaps = 1/369 (0%) Query: 30 QIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAI 89 QI+ + + I W +N N+ ++ G FL AGF I Q ++ Y +Y Sbjct: 31 QILAVVAVVGIIGWLFHNTVTNLSNRGITSGFAFLDRGAGFGIVQHLIDYQQGDTYGRVF 90 Query: 90 LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 +VG +NT ++ ++ A+++G +G RLS N L+ + +Y+E+FRNIPPL+ IFF Y Sbjct: 91 IVGLLNTLLVSALCIVFASVLGFFIGLARLSDNWLLRKLSTIYIEIFRNIPPLLQIFFWY 150 Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209 +VL LP P ++ +FL+NRGL P+ + F+ + V+ IVLS+ R ++ Sbjct: 151 FAVLRNLPGPRQAVSALDLVFLSNRGLYIPSPQLGDGFLAFILAVVIAIVLSVGLFRFNK 210 Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269 KTG+ I+ LI GLP L LH+D P L FNF GG + PE +L Sbjct: 211 THQIKTGQLRRTWPIAAVLIIGLPLLAQWLFGAALHWDVPALRGFNFRGGMVLIPELAAL 270 Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329 +ALS YT+AFIAEI+R+G+ AVP GQ EAA +LGL + R V++PQA+R IIPPLTS Sbjct: 271 TLALSIYTSAFIAEIIRAGIQAVPYGQHEAARSLGLPNPVTLRRVIIPQALRVIIPPLTS 330 Query: 330 QYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388 QYLN++KNSSLA A+G+ D+VS+ GT++NQTGQAIE I + M +YL +S+ I+L MN Sbjct: 331 QYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAMTMSVYLIISLTISLLMNIY 390 Query: 389 NAKIALKEK 397 N +IA+ E+ Sbjct: 391 NRRIAIVER 399 >gi|289678217|ref|ZP_06499107.1| amino acid ABC transporter permease [Pseudomonas syringae pv. syringae FF5] Length = 393 Score = 280 bits (715), Expect = 4e-73, Method: Compositional matrix adjust. Identities = 157/380 (41%), Positives = 233/380 (61%), Gaps = 1/380 (0%) Query: 19 LYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVP 78 L D +V QII + + + + +N N++ ++ G GFL AGF I Q ++ Sbjct: 14 LSDPKVRAWLFQIITVVAVIALGWFIFDNTQTNLQHRGITSGFGFLENSAGFGIAQHLID 73 Query: 79 YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138 Y+ SYA ++G +NT ++ G++ AT++G ++G RLS N +++ + VYVEVFRN Sbjct: 74 YSEADSYARVFVIGLLNTLLVSVIGIVLATLLGFVIGVARLSPNWMISKLATVYVEVFRN 133 Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198 IPPL+ I F Y +V LP P + F+++RGL+ P A F+ S V+ + Sbjct: 134 IPPLLQILFWYTAVFLTLPGPRQAHGYLDMFFVSSRGLNMPRALPAEGAWAFLVSLVVAV 193 Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258 + + R + E TG+ ++ L+ +P L ++ +H++ P L FNF G Sbjct: 194 IAIVMMVRWANKRFEATGQPFHKFWVGLALLLVIPGLSVLIFGSPVHWELPQLKGFNFSG 253 Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G + PE +SL +AL+ YTAAFIAEIVRSG+ +V GQ EAA +LGL R V++PQ Sbjct: 254 GWVLIPELISLTLALTIYTAAFIAEIVRSGIKSVSHGQTEAARSLGLRPGPTLRKVIIPQ 313 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSL 377 A+R IIPPLTSQ+LNL KNSSLA A+G+ ++VS+ GT++NQTGQAIE+I I M +YL++ Sbjct: 314 ALRVIIPPLTSQFLNLAKNSSLAAAIGYPEMVSLFAGTVLNQTGQAIEVIAITMSVYLAI 373 Query: 378 SIMIALFMNRLNAKIALKEK 397 SI I+L MN N +IAL E+ Sbjct: 374 SISISLLMNWYNKRIALIER 393 >gi|331659558|ref|ZP_08360500.1| putative amino-acid ABC transporter permease protein YhdX [Escherichia coli TA206] gi|331054140|gb|EGI26169.1| putative amino-acid ABC transporter permease protein YhdX [Escherichia coli TA206] Length = 393 Score = 280 bits (715), Expect = 4e-73, Method: Compositional matrix adjust. Identities = 158/369 (42%), Positives = 229/369 (62%), Gaps = 1/369 (0%) Query: 30 QIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAI 89 QI++ + + I W +N N+ ++ G FL AGF I Q ++ Y +Y Sbjct: 25 QILVVVAVVGIIGWLFHNTVTNLSNRGITSGFAFLDRGAGFGIVQHLIDYQQGDTYGRVF 84 Query: 90 LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 +VG +NT ++ ++ A+++G +G RLS N L+ + +Y+E+FRNIPPL+ IFF Y Sbjct: 85 IVGLLNTLLVSALCIVFASVLGFFIGLARLSDNWLLRKLSTIYIEIFRNIPPLLQIFFWY 144 Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209 +VL LP P ++ +FL+NRGL P+ + F+ + V+ IVLS+ R ++ Sbjct: 145 FAVLRNLPGPRQAVSALDLVFLSNRGLYIPSPQLGDRFLAFILAVVIAIVLSVGLFRFNK 204 Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269 KTG+ I+ LI GLP L LH+D P L FNF GG + PE +L Sbjct: 205 THQIKTGQLRRTWPIAAVLIIGLPLLAQWLFGAALHWDVPALRGFNFRGGMVLIPELAAL 264 Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329 +ALS YT+AFIAEI+R+G+ AVP GQ EAA +LGL + R V++PQA+R IIPPLTS Sbjct: 265 TLALSVYTSAFIAEIIRAGIQAVPYGQHEAARSLGLPNPVTLRQVIIPQALRVIIPPLTS 324 Query: 330 QYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388 QYLN++KNSSLA A+G+ D+VS+ GT++NQTGQAIE I + M +YL +S+ I+L MN Sbjct: 325 QYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAMTMSVYLIISLTISLLMNIY 384 Query: 389 NAKIALKEK 397 N +IA+ E+ Sbjct: 385 NRRIAIVER 393 >gi|330899537|gb|EGH30956.1| polar amino acid ABC transporter, inner membrane subunit [Pseudomonas syringae pv. japonica str. M301072PT] Length = 393 Score = 280 bits (715), Expect = 4e-73, Method: Compositional matrix adjust. Identities = 157/380 (41%), Positives = 233/380 (61%), Gaps = 1/380 (0%) Query: 19 LYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVP 78 L D +V QII + + + + +N N++ ++ G GFL AGF I Q ++ Sbjct: 14 LSDPKVRAWLFQIITVVAVIALGWFIFDNTQTNLQHRGITSGFGFLENSAGFGIAQHLID 73 Query: 79 YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138 Y+ SYA ++G +NT ++ G++ AT++G ++G RLS N +++ + VYVEVFRN Sbjct: 74 YSEADSYARVFVIGLLNTLLVSVIGIVLATLLGFVIGVARLSPNWMISKLATVYVEVFRN 133 Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198 IPPL+ I F Y +V LP P + F+++RGL+ P A F+ S V+ + Sbjct: 134 IPPLLQILFWYTAVFLTLPGPRQAHGYLDMFFVSSRGLNMPRALPAEGAWAFLVSLVIAV 193 Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258 + + R + E TG+ ++ L+ +P L ++ +H++ P L FNF G Sbjct: 194 IAIVMMVRWANKRFEATGQPFHKFWVGLALLLVIPGLSVLIFGSPVHWELPQLKGFNFSG 253 Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G + PE +SL +AL+ YTAAFIAEIVRSG+ +V GQ EAA +LGL R V++PQ Sbjct: 254 GWVLIPELISLTLALTIYTAAFIAEIVRSGIKSVSHGQTEAARSLGLRPGPTLRKVIIPQ 313 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSL 377 A+R IIPPLTSQ+LNL KNSSLA A+G+ ++VS+ GT++NQTGQAIE+I I M +YL++ Sbjct: 314 ALRVIIPPLTSQFLNLAKNSSLAAAIGYPEMVSLFAGTVLNQTGQAIEVIAITMSVYLAI 373 Query: 378 SIMIALFMNRLNAKIALKEK 397 SI I+L MN N +IAL E+ Sbjct: 374 SISISLLMNWYNKRIALIER 393 >gi|89093225|ref|ZP_01166175.1| general L-amino acid transport system permease protein AapQ [Oceanospirillum sp. MED92] gi|89082521|gb|EAR61743.1| general L-amino acid transport system permease protein AapQ [Oceanospirillum sp. MED92] Length = 393 Score = 280 bits (715), Expect = 4e-73, Method: Compositional matrix adjust. Identities = 152/355 (42%), Positives = 228/355 (64%), Gaps = 3/355 (0%) Query: 45 VNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGM 104 ++N NME + G FL AGF+I ++PY + ++Y +VG +NT ++ G+ Sbjct: 40 ISNTLANMEARGIQSGYDFLFNTAGFDILMSLIPYDATNTYGRTFIVGLLNTVLVSIIGI 99 Query: 105 IPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIV 164 I +T++G ++G S N L+ + YVE FRNIP L+ IFF Y +VL+ LP S+ Sbjct: 100 ILSTMVGFIMGVAHFSHNLLIRKLATAYVETFRNIPLLLQIFFWYFAVLAALPSARQSMS 159 Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFA-TRLSRHFHEKTGKALPLLY 223 L +FLN RGL FP LT + A + V++ + ++ +F R ++ + TG+ P+L+ Sbjct: 160 LGEVIFLNVRGLYFPGLTPEGGASV-VYAAIAAAIIGIFVLKRWAKKRQDDTGQQFPVLW 218 Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283 +S ++FGLP L LI + + +D P L FNF GG TV PE M+L +AL+ YT AFIAE Sbjct: 219 VSLGMLFGLPLLALIVMGFPFAWDIPYLKGFNFRGGITVIPELMALALALTVYTGAFIAE 278 Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343 VR+G+ AVP GQ EAA ++GL K +L+++PQAMR I+P L S+Y +L+KNS+LA A Sbjct: 279 AVRAGIQAVPHGQTEAARSIGLKEGKIMKLIIVPQAMRVIVPLLNSEYQSLVKNSTLATA 338 Query: 344 VGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 +G+ DL +V GT +NQTGQAIEI+ + M +Y +++ I+ MNRLN+ +AL E+ Sbjct: 339 IGYPDLFTVFVGTTLNQTGQAIEIVFMTMAVYFVVNMTISFLMNRLNSSVALTER 393 >gi|221370066|ref|YP_002521162.1| Polar amino acid ABC transporter, inner membrane subunit [Rhodobacter sphaeroides KD131] gi|221163118|gb|ACM04089.1| Polar amino acid ABC transporter, inner membrane subunit [Rhodobacter sphaeroides KD131] Length = 398 Score = 280 bits (715), Expect = 4e-73, Method: Compositional matrix adjust. Identities = 151/384 (39%), Positives = 239/384 (62%), Gaps = 1/384 (0%) Query: 14 SRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEID 73 S LY + QI LA + ++ + NV N+ + N++ G GFL + + FEI Sbjct: 16 SPKDILYSESFRTVVYQIALAAAVALLGFYLYQNVVENLARQNIATGFGFLGQVSQFEIG 75 Query: 74 QGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYV 133 + ++ Y++ +Y A+ VG +NT ++ +G++ AT+IG VG R+S+N L+ + YV Sbjct: 76 ETLIAYSARDTYGRALAVGLMNTLSVSAAGIVVATVIGFSVGIARVSSNWLLQRLATAYV 135 Query: 134 EVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFS 193 E+ RNIP ++ + F + +V+ LP P ++ L FL+NRGL+F + + + Sbjct: 136 EIVRNIPVILQVIF-WAAVIRNLPAPRQAVELWGLGFLSNRGLTFAMPSAHAAHLWMLAA 194 Query: 194 FVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ 253 V GI L++ A+ ++ E TG+ + +L+ LI GLP LV + P Sbjct: 195 LVAGIALAILASHKAKRHREATGRYIDMLWPCVGLIVGLPLLVWLGFGAPHEISFPERRG 254 Query: 254 FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313 FNF GG+T+SPEF++L +S Y++ FIAEIVR+G+ A PRGQ+EAA ++ L R R Sbjct: 255 FNFAGGATISPEFVALMTGISLYSSGFIAEIVRAGIQATPRGQVEAARSIALRPRFILRY 314 Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI 373 V+LPQA+R I+PPLTSQY++L+KNSS+AV +G+ DLV++G T++NQTGQA+E I + M + Sbjct: 315 VVLPQALRVIVPPLTSQYVSLIKNSSIAVVIGYPDLVNIGNTVMNQTGQAVEAIAVMMLV 374 Query: 374 YLSLSIMIALFMNRLNAKIALKEK 397 YL +S++ +L MN N +A+KE+ Sbjct: 375 YLIVSLVTSLLMNFYNRLVAIKER 398 >gi|215488576|ref|YP_002331007.1| predicted amino-acid transporter subunit [Escherichia coli O127:H6 str. E2348/69] gi|312968400|ref|ZP_07782609.1| general L-amino acid transport system permease protein aapQ [Escherichia coli 2362-75] gi|215266648|emb|CAS11087.1| predicted amino-acid transporter subunit [Escherichia coli O127:H6 str. E2348/69] gi|312286618|gb|EFR14529.1| general L-amino acid transport system permease protein aapQ [Escherichia coli 2362-75] gi|320194755|gb|EFW69385.1| Glutamate Aspartate transport system permease protein GltJ [Escherichia coli WV_060327] Length = 393 Score = 279 bits (714), Expect = 5e-73, Method: Compositional matrix adjust. Identities = 157/369 (42%), Positives = 227/369 (61%), Gaps = 1/369 (0%) Query: 30 QIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAI 89 QI+ + + I W +N N+ ++ G FL AGF I Q ++ Y +Y Sbjct: 25 QILAVVAVVGIIGWLFHNTVTNLSNRGITSGFAFLDRGAGFGIVQHLIDYQQGDTYGRVF 84 Query: 90 LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 +VG +NT ++ ++ A+++G +G RLS N L+ + +Y+E+FRNIPPL+ IFF Y Sbjct: 85 IVGLLNTLLVSALCIVFASVLGFFIGLARLSDNWLLRKLSTIYIEIFRNIPPLLQIFFWY 144 Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209 +VL LP P ++ FL+NRGL P+ + F+ + V+ IVLS+ R ++ Sbjct: 145 FAVLRNLPGPRQAVSAFDLAFLSNRGLYIPSPQLGDGFIAFILAVVMAIVLSVGLFRFNK 204 Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269 + KTG+ + LI GLP L LH+D P L FNF GG + PE +L Sbjct: 205 TYQIKTGQLRRTWPFAAVLIIGLPLLAQWLFGAALHWDVPALRGFNFRGGMVLIPELAAL 264 Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329 +ALS YT+AFIAEI+R+G+ AVP GQ EAA +LGL + R V++PQA+R IIPPLTS Sbjct: 265 TLALSVYTSAFIAEIIRAGIQAVPYGQHEAARSLGLPNPVTLRQVIIPQALRVIIPPLTS 324 Query: 330 QYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388 QYLN++KNSSLA A+G+ D+VS+ GT++NQTGQAIE I + M +YL +S+ I+L MN Sbjct: 325 QYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAMTMSVYLIISLTISLLMNIY 384 Query: 389 NAKIALKEK 397 N +IA+ E+ Sbjct: 385 NRRIAIVER 393 >gi|331649070|ref|ZP_08350158.1| putative amino-acid ABC transporter permease protein YhdX [Escherichia coli M605] gi|331042817|gb|EGI14959.1| putative amino-acid ABC transporter permease protein YhdX [Escherichia coli M605] Length = 399 Score = 279 bits (714), Expect = 5e-73, Method: Compositional matrix adjust. Identities = 157/369 (42%), Positives = 227/369 (61%), Gaps = 1/369 (0%) Query: 30 QIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAI 89 QI+ + I W +N N+ ++ G FL AGF I Q ++ Y +Y Sbjct: 31 QILAVVAAVSIVGWLFHNTVTNLSNRGITSGFAFLDRGAGFGIVQHLIDYQQGDTYGRVF 90 Query: 90 LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 +VG +NT ++ ++ A+++G +G RLS N L+ + +Y+E+FRNIPPL+ IFF Y Sbjct: 91 IVGLLNTLLVSALCIVFASVLGFFIGLARLSDNWLLRKLSTIYIEIFRNIPPLLQIFFWY 150 Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209 +VL LP P ++ +FL+NRGL P+ + F+ + V+ IVLS+ R ++ Sbjct: 151 FAVLRNLPGPRQAVSALDLVFLSNRGLYIPSPQLGDGFIAFILAVVMAIVLSVGLFRFNK 210 Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269 + KTG+ + LI GLP L LH+D P L FNF GG + PE +L Sbjct: 211 TYQIKTGQLHRTWPFAAVLIIGLPLLTQWLFGAALHWDVPALRGFNFRGGMVLIPELAAL 270 Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329 +ALS YT+AFIAEI+R+G+ AVP GQ EAA +LGL + R V++PQA+R IIPPLTS Sbjct: 271 TLALSIYTSAFIAEIIRAGIQAVPYGQHEAARSLGLPNPVTLRQVIIPQALRVIIPPLTS 330 Query: 330 QYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388 QYLN++KNSSLA A+G+ D+VS+ GT++NQTGQAIE I + M +YL +S+ I+L MN Sbjct: 331 QYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAMTMSVYLIISLTISLLMNIY 390 Query: 389 NAKIALKEK 397 N +IA+ E+ Sbjct: 391 NRRIAIVER 399 >gi|330909320|gb|EGH37834.1| glutamate Aspartate transport system permease protein GltJ [Escherichia coli AA86] Length = 393 Score = 279 bits (714), Expect = 5e-73, Method: Compositional matrix adjust. Identities = 157/369 (42%), Positives = 227/369 (61%), Gaps = 1/369 (0%) Query: 30 QIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAI 89 QI+ + I W +N N+ ++ G FL AGF I Q ++ Y +Y Sbjct: 25 QILAVVAAVSIVGWLFHNTVTNLSNRGITSGFAFLDRGAGFGIVQHLIDYQQGDTYGRVF 84 Query: 90 LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 +VG +NT ++ ++ A+++G +G RLS N L+ + +Y+E+FRNIPPL+ IFF Y Sbjct: 85 IVGLLNTLLVSALCIVFASVLGFFIGLARLSDNWLLRKLSTIYIEIFRNIPPLLQIFFWY 144 Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209 +VL LP P ++ +FL+NRGL P+ + F+ + V+ IVLS+ R ++ Sbjct: 145 FAVLRNLPGPRQAVSALDLVFLSNRGLYIPSPQLGDGFIAFILAVVMAIVLSVGLFRFNK 204 Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269 + KTG+ + LI GLP L LH+D P L FNF GG + PE +L Sbjct: 205 TYQIKTGQLHRTWPFAAVLIIGLPLLTQWLFGAALHWDVPALRGFNFRGGMVLIPELAAL 264 Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329 +ALS YT+AFIAEI+R+G+ AVP GQ EAA +LGL + R V++PQA+R IIPPLTS Sbjct: 265 TLALSIYTSAFIAEIIRAGIQAVPYGQHEAARSLGLPNPVTLRQVIIPQALRVIIPPLTS 324 Query: 330 QYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388 QYLN++KNSSLA A+G+ D+VS+ GT++NQTGQAIE I + M +YL +S+ I+L MN Sbjct: 325 QYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAMTMSVYLIISLTISLLMNIY 384 Query: 389 NAKIALKEK 397 N +IA+ E+ Sbjct: 385 NRRIAIVER 393 >gi|331654868|ref|ZP_08355868.1| putative amino-acid ABC transporter permease protein YhdX [Escherichia coli M718] gi|331048250|gb|EGI20327.1| putative amino-acid ABC transporter permease protein YhdX [Escherichia coli M718] Length = 399 Score = 279 bits (714), Expect = 5e-73, Method: Compositional matrix adjust. Identities = 158/369 (42%), Positives = 227/369 (61%), Gaps = 1/369 (0%) Query: 30 QIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAI 89 QI+ + + I W +N N+ ++ G FL AGF I Q ++ Y +Y Sbjct: 31 QILAVVAVVGIVGWLFHNTVTNLNNRGITSGFAFLDRGAGFGIVQHLIDYQQGDTYGRVF 90 Query: 90 LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 +VG +NT ++ ++ A+++G +G RLS N L+ + +Y+E+FRNIPPL+ IFF Y Sbjct: 91 IVGLLNTLLVSALCIVFASVLGFFIGLARLSDNWLLRKLSTIYIEIFRNIPPLLQIFFWY 150 Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209 +VL LP P + FL+NRGL P+ + F+ + V+ IVLS+ R ++ Sbjct: 151 FAVLRNLPGPRQAASAFDLAFLSNRGLYIPSPQLGDGFIAFILAVVMAIVLSVGLFRFNK 210 Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269 + KTG+ I+ LI GLP L LH+D P L FNF GG + PE +L Sbjct: 211 TYQIKTGQLRRTWPIAAVLIIGLPLLAQWLFGAALHWDVPALRGFNFRGGMVLIPELAAL 270 Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329 +ALS YT+AFIAEI+R+G+ AVP GQ EAA +LGL + R V++PQA+R IIPPLTS Sbjct: 271 TLALSVYTSAFIAEIIRAGIQAVPYGQHEAARSLGLPNPVTLRQVIIPQALRVIIPPLTS 330 Query: 330 QYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388 QYLN++KNSSLA A+G+ D+VS+ GT++NQTGQAIE I + M +YL +S+ I+L MN Sbjct: 331 QYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAMTMSVYLIISLTISLLMNIY 390 Query: 389 NAKIALKEK 397 N +IA+ E+ Sbjct: 391 NRRIAIVER 399 >gi|119946444|ref|YP_944124.1| ABC polar amino acid transporter inner membrane protein [Psychromonas ingrahamii 37] gi|119946448|ref|YP_944128.1| ABC polar amino acid transporter inner membrane protein [Psychromonas ingrahamii 37] gi|119865048|gb|ABM04525.1| ABC polar amino acid transporter inner membrane protein [Psychromonas ingrahamii 37] gi|119865052|gb|ABM04529.1| ABC polar amino acid transporter inner membrane protein [Psychromonas ingrahamii 37] Length = 405 Score = 279 bits (714), Expect = 5e-73, Method: Compositional matrix adjust. Identities = 155/377 (41%), Positives = 232/377 (61%), Gaps = 2/377 (0%) Query: 23 RVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYT-S 81 R I Q + L + + +N+++N+EK ++ G FL E AGF + Q ++ Y + Sbjct: 29 RNRAIIFQCLALLAVVACAFYFTSNMFDNIEKRGITTGFSFLGETAGFGVSQSLIAYDDT 88 Query: 82 DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141 S++ +VG +NT + G+I A++ G L+G GRLS+N +VA + VY+E FRNIP Sbjct: 89 TSTFLDVFIVGILNTLLVGVIGIICASVFGLLIGIGRLSSNFIVAKLSLVYIETFRNIPI 148 Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201 L+ I F Y VL+ LP P S +FLNNRGL P + + + +FV+ Sbjct: 149 LLQILFWYNIVLAALPGPRQSFSYFESIFLNNRGLLLPEPIFQSGSIFILIAFVIACTAV 208 Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGST 261 +F TR ++ H++TG+ PL+ +S ++ P L + + P L FNF GG Sbjct: 209 IFLTRWAKKRHDQTGEEFPLIKVSLAILIVSPLLAYFVTGQPITAEYPALKGFNFQGGLA 268 Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321 + PEF++L ALS YTA +IAE VR+G+ AV GQ EAA +LGL R V+LPQA+R Sbjct: 269 IIPEFLALTFALSIYTATYIAEAVRAGIEAVASGQKEAAESLGLKKHVILRKVVLPQALR 328 Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIM 380 IIPP+ +QYLNL+KNSSLA A+G+ ++V++ GT +NQ GQAIEII++ M +YL+ SI+ Sbjct: 329 VIIPPVINQYLNLVKNSSLATAIGYPEIVTLFSGTTLNQVGQAIEIIMMTMAVYLTFSIV 388 Query: 381 IALFMNRLNAKIALKEK 397 I+L +N +NAK+ +K + Sbjct: 389 ISLLLNWVNAKMEIKGR 405 >gi|327484031|gb|AEA78438.1| Amino acid ABC transporter, permease protein [Vibrio cholerae LMA3894-4] Length = 401 Score = 279 bits (713), Expect = 6e-73, Method: Compositional matrix adjust. Identities = 171/400 (42%), Positives = 238/400 (59%), Gaps = 9/400 (2%) Query: 3 KNARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIG 62 K +T + LY+ ++ Q++ +L VNN N+E ++ G Sbjct: 6 KATPETSDAHSKHTNLLYNPTFRSVVFQLLAVCVLAFFLYTIVNNALTNLESRGIATGFA 65 Query: 63 FLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN 122 FL + AGF I Q ++PY SY LVG +NT ++ G++ ATI+G L+G RLS+N Sbjct: 66 FLDQTAGFGISQSLIPYDETYSYGRTFLVGLLNTALVSVLGILLATILGFLIGIARLSSN 125 Query: 123 KLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLT 182 L++ + VY+E FRN+P L+ IFF Y VL LP S+ L +LN +GL Sbjct: 126 WLISRLAAVYIETFRNLPLLLQIFFWYFVVLQALPSARESMHLGEWFYLNIKGLYLAKPI 185 Query: 183 MDTNAKIFVFSFVLGI----VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLI 238 ++ + + + + GI VLS++AT R TG+ P+ L P LV Sbjct: 186 FESGSIWVLVALIAGIIACWVLSIWATNRQR----LTGQQTPMGRYILLLCVAFPVLVYF 241 Query: 239 ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQME 298 L + + PVL FNF GG +V PE +L +AL+ YTA+FIAEIVRSG+ AV GQ E Sbjct: 242 LLGQPITAEYPVLRGFNFQGGISVLPELAALLVALTIYTASFIAEIVRSGINAVSHGQTE 301 Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTII 357 AA++LGLT K +LV++PQA+R IIPPLTSQYLNL KNSSLA+A+G+ DLVSV GT + Sbjct: 302 AAMSLGLTRTKTLKLVIIPQALRIIIPPLTSQYLNLTKNSSLAMAIGYPDLVSVFAGTTL 361 Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 NQTGQAIEII + M +YL+LS++ + MN N K+AL E+ Sbjct: 362 NQTGQAIEIISMTMLVYLTLSLLTSALMNLYNRKVALVER 401 >gi|153825266|ref|ZP_01977933.1| amino acid ABC transporter, permease protein [Vibrio cholerae MZO-2] gi|183179359|ref|ZP_02957570.1| amino acid ABC transporter, permease protein [Vibrio cholerae MZO-3] gi|229515733|ref|ZP_04405192.1| amino acid ABC transporter permease protein [Vibrio cholerae TMA 21] gi|229529563|ref|ZP_04418953.1| amino acid ABC transporter permease protein [Vibrio cholerae 12129(1)] gi|149741094|gb|EDM55153.1| amino acid ABC transporter, permease protein [Vibrio cholerae MZO-2] gi|183012770|gb|EDT88070.1| amino acid ABC transporter, permease protein [Vibrio cholerae MZO-3] gi|229333337|gb|EEN98823.1| amino acid ABC transporter permease protein [Vibrio cholerae 12129(1)] gi|229347502|gb|EEO12462.1| amino acid ABC transporter permease protein [Vibrio cholerae TMA 21] Length = 401 Score = 279 bits (713), Expect = 6e-73, Method: Compositional matrix adjust. Identities = 171/400 (42%), Positives = 238/400 (59%), Gaps = 9/400 (2%) Query: 3 KNARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIG 62 K +T + LY+ ++ Q++ +L VNN N+E ++ G Sbjct: 6 KATPETSDAHSKHTNLLYNPTFRSVMFQLLAVCVLAFFLYTIVNNALTNLESRGIATGFA 65 Query: 63 FLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN 122 FL + AGF I Q ++PY SY LVG +NT ++ G++ ATI+G L+G RLS+N Sbjct: 66 FLDQTAGFGISQSLIPYDETYSYGRTFLVGLLNTALVSVLGILLATILGFLIGIARLSSN 125 Query: 123 KLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLT 182 L++ + VY+E FRN+P L+ IFF Y VL LP S+ L +LN +GL Sbjct: 126 WLISRLAAVYIETFRNLPLLLQIFFWYFVVLQALPSARESMHLGEWFYLNIKGLYLAKPI 185 Query: 183 MDTNAKIFVFSFVLGI----VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLI 238 ++ + + + + GI VLS++AT R TG+ P+ L P LV Sbjct: 186 FESGSIWVLVALIAGIIACWVLSIWATNRQR----LTGQQTPMGRYILLLCVAFPVLVYF 241 Query: 239 ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQME 298 L + + PVL FNF GG +V PE +L +AL+ YTA+FIAEIVRSG+ AV GQ E Sbjct: 242 LLGQPITAEYPVLRGFNFQGGISVLPELAALLVALTIYTASFIAEIVRSGINAVSHGQTE 301 Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTII 357 AA++LGLT K +LV++PQA+R IIPPLTSQYLNL KNSSLA+A+G+ DLVSV GT + Sbjct: 302 AAMSLGLTRTKTLKLVIIPQALRIIIPPLTSQYLNLTKNSSLAMAIGYPDLVSVFAGTTL 361 Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 NQTGQAIEII + M +YL+LS++ + MN N K+AL E+ Sbjct: 362 NQTGQAIEIISMTMLVYLTLSLLTSALMNLYNRKVALVER 401 >gi|153212715|ref|ZP_01948372.1| amino acid ABC transporter, permease protein [Vibrio cholerae 1587] gi|229523537|ref|ZP_04412942.1| amino acid ABC transporter permease protein [Vibrio cholerae bv. albensis VL426] gi|254225347|ref|ZP_04918959.1| amino acid ABC transporter, permease protein [Vibrio cholerae V51] gi|254286187|ref|ZP_04961147.1| amino acid ABC transporter, permease protein [Vibrio cholerae AM-19226] gi|262192390|ref|ZP_06050543.1| amino acid ABC transporter permease protein [Vibrio cholerae CT 5369-93] gi|297578946|ref|ZP_06940874.1| amino acid ABC transporter [Vibrio cholerae RC385] gi|124116365|gb|EAY35185.1| amino acid ABC transporter, permease protein [Vibrio cholerae 1587] gi|125622188|gb|EAZ50510.1| amino acid ABC transporter, permease protein [Vibrio cholerae V51] gi|150423856|gb|EDN15797.1| amino acid ABC transporter, permease protein [Vibrio cholerae AM-19226] gi|229337118|gb|EEO02135.1| amino acid ABC transporter permease protein [Vibrio cholerae bv. albensis VL426] gi|262031743|gb|EEY50328.1| amino acid ABC transporter permease protein [Vibrio cholerae CT 5369-93] gi|297536540|gb|EFH75373.1| amino acid ABC transporter [Vibrio cholerae RC385] Length = 401 Score = 279 bits (713), Expect = 7e-73, Method: Compositional matrix adjust. Identities = 171/400 (42%), Positives = 238/400 (59%), Gaps = 9/400 (2%) Query: 3 KNARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIG 62 K +T + LY+ ++ Q++ +L VNN N+E ++ G Sbjct: 6 KATPETSDAHSKHTNLLYNPTFRSVVFQLLAVCVLAFFLYTIVNNALTNLESRGIATGFA 65 Query: 63 FLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN 122 FL + AGF I Q ++PY SY LVG +NT ++ G++ ATI+G L+G RLS+N Sbjct: 66 FLDQTAGFGISQSLIPYDETYSYGRTFLVGLLNTALVSVLGILLATILGFLIGIARLSSN 125 Query: 123 KLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLT 182 L++ + VY+E FRN+P L+ IFF Y VL LP S+ L +LN +GL Sbjct: 126 WLISRLAAVYIETFRNLPLLLQIFFWYFVVLQALPSARESMHLGEWFYLNIKGLYLAKPI 185 Query: 183 MDTNAKIFVFSFVLGI----VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLI 238 ++ + + + + GI VLS++AT R TG+ P+ L P LV Sbjct: 186 FESGSIWVLVALIAGIIACWVLSIWATNRQR----LTGQQTPMGRYILLLCVAFPVLVYF 241 Query: 239 ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQME 298 L + + PVL FNF GG +V PE +L +AL+ YTA+FIAEIVRSG+ AV GQ E Sbjct: 242 LLGQPITAEYPVLRGFNFQGGISVLPELAALLVALTIYTASFIAEIVRSGINAVSHGQTE 301 Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTII 357 AA++LGLT K +LV++PQA+R IIPPLTSQYLNL KNSSLA+A+G+ DLVSV GT + Sbjct: 302 AAMSLGLTRTKTLKLVIIPQALRIIIPPLTSQYLNLTKNSSLAMAIGYPDLVSVFAGTTL 361 Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 NQTGQAIEII + M +YL+LS++ + MN N K+AL E+ Sbjct: 362 NQTGQAIEIISMTMLVYLTLSLLTSALMNLYNRKVALVER 401 >gi|296104984|ref|YP_003615130.1| general L-amino acid transport system permease protein [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295059443|gb|ADF64181.1| general L-amino acid transport system permease protein [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 393 Score = 278 bits (712), Expect = 7e-73, Method: Compositional matrix adjust. Identities = 162/369 (43%), Positives = 227/369 (61%), Gaps = 1/369 (0%) Query: 30 QIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAI 89 QII L + +I ++ ++N N+ ++ G FL AGF I Q ++ Y +Y Sbjct: 25 QIIAILAVVLIAIYLIHNTVTNLNNRGITSGFAFLDRSAGFGIVQHLIDYQEGDTYGRVF 84 Query: 90 LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 LVG +NT ++ ++ A+I+G +G RLS N L+ + +Y+E FRNIPPL+ IFF Y Sbjct: 85 LVGLLNTLLVSALCIVFASILGFFIGLARLSDNWLLRKLSTIYIETFRNIPPLLQIFFWY 144 Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209 +VL LP P ++ FL+NRGL P+ + F+ + ++ + LS R +R Sbjct: 145 FAVLRNLPGPRQAVDAFDLFFLSNRGLYIPSPELAEGIYAFIAAIIIALALSAGLFRYNR 204 Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269 KTG+ I+ LI GLP L LH+D P L FNF GG + PE +L Sbjct: 205 KHQIKTGQLRKTWPIAALLIIGLPLLTHWLFGAALHWDVPHLRGFNFQGGMVLIPELAAL 264 Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329 +ALS YT+AFIAEI+R+G+ AVP GQ EAA +LGL H R V++PQA+R IIPPLTS Sbjct: 265 TLALSIYTSAFIAEIIRAGIQAVPHGQHEAARSLGLPHTVTLRQVIIPQALRVIIPPLTS 324 Query: 330 QYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388 QYLN++KNSSLA A+G+ D+VS+ GT++NQTGQAIE I I M +YL +S+ I+L MN Sbjct: 325 QYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAITMSVYLIISLAISLLMNLY 384 Query: 389 NAKIALKEK 397 N +IAL E+ Sbjct: 385 NRRIALVER 393 >gi|229521467|ref|ZP_04410886.1| amino acid ABC transporter permease protein [Vibrio cholerae TM 11079-80] gi|229341565|gb|EEO06568.1| amino acid ABC transporter permease protein [Vibrio cholerae TM 11079-80] Length = 401 Score = 278 bits (712), Expect = 7e-73, Method: Compositional matrix adjust. Identities = 171/400 (42%), Positives = 238/400 (59%), Gaps = 9/400 (2%) Query: 3 KNARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIG 62 K +T + LY+ ++ Q++ +L VNN N+E ++ G Sbjct: 6 KATPETSDAHSKHTNLLYNPTFRSVVFQLLAVCVLAFFLYAIVNNALTNLESRGIATGFA 65 Query: 63 FLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN 122 FL + AGF I Q ++PY SY LVG +NT ++ G++ ATI+G L+G RLS+N Sbjct: 66 FLDQTAGFGISQSLIPYDETYSYGRTFLVGLLNTALVSVLGILLATILGFLIGIARLSSN 125 Query: 123 KLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLT 182 L++ + VY+E FRN+P L+ IFF Y VL LP S+ L +LN +GL Sbjct: 126 WLISRLAAVYIETFRNLPLLLQIFFWYFVVLQALPSARESMNLGEWFYLNIKGLYLAKPI 185 Query: 183 MDTNAKIFVFSFVLGI----VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLI 238 ++ + + + + GI VLS++AT R TG+ P+ L P LV Sbjct: 186 FESGSIWVLVALIAGIIACWVLSIWATNRQR----LTGQQTPMGRYILLLCVAFPVLVYF 241 Query: 239 ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQME 298 L + + PVL FNF GG +V PE +L +AL+ YTA+FIAEIVRSG+ AV GQ E Sbjct: 242 LLGQPITAEYPVLRGFNFQGGISVLPELAALLVALTIYTASFIAEIVRSGINAVSHGQTE 301 Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTII 357 AA++LGLT K +LV++PQA+R IIPPLTSQYLNL KNSSLA+A+G+ DLVSV GT + Sbjct: 302 AAMSLGLTRTKTLKLVIIPQALRIIIPPLTSQYLNLTKNSSLAMAIGYPDLVSVFAGTTL 361 Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 NQTGQAIEII + M +YL+LS++ + MN N K+AL E+ Sbjct: 362 NQTGQAIEIISMTMLVYLTLSLLTSALMNLYNRKVALVER 401 >gi|83595862|gb|ABC25224.1| amino acid ABC transporter, permease protein [uncultured marine bacterium Ant4D3] Length = 394 Score = 278 bits (712), Expect = 8e-73, Method: Compositional matrix adjust. Identities = 159/383 (41%), Positives = 240/383 (62%), Gaps = 1/383 (0%) Query: 16 MKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQG 75 ++ YD ++ VQII A L+ F + +NN N+ + FL + A ++I+Q Sbjct: 12 LRAWYDKETRSVIVQIIAAALILAFFSFIINNAVVNLSNIGKDINFSFLWDNASYDINQH 71 Query: 76 IVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEV 135 ++ Y+S SS+ A++VG +NT +A +G++ ATI+G L+G RLS+N L I VY+E Sbjct: 72 LIEYSSTSSHFRAMIVGLINTLLVAVAGIVLATILGFLLGVMRLSSNWLTQKIAYVYIEY 131 Query: 136 FRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFV 195 RN+P L+ I L+ ++S LP P S FLNNRG P+ + I V Sbjct: 132 MRNVPVLLHILLLHGLIVSSLPRPKGSYNFGDTFFLNNRGFQMPSPEFQSLFWIVSGFVV 191 Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFN 255 G+ + + +R ++ + TGKA P+ I+ I LP V L + +D P L FN Sbjct: 192 GGLAFAWWFSRHAQKVQDTTGKAYPVALINIAAIVLLPLAVYFILGSPIEWDVPALKGFN 251 Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315 F GG + PEF++L++ALS YTAAFI EIVR+G++A+ GQ EAA ALG+++ + +LV+ Sbjct: 252 FKGGMVIRPEFIALWLALSLYTAAFIGEIVRAGIVAIDHGQTEAAQALGISNSRVLKLVV 311 Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV-SVGGTIINQTGQAIEIILIWMFIY 374 +PQA+R IIPPLTSQYLNL KNSSLA+A+G+ D+V ++GG +NQTG+ +E +LI M IY Sbjct: 312 IPQALRVIIPPLTSQYLNLAKNSSLALAIGYMDIVATIGGISLNQTGREMECMLIVMGIY 371 Query: 375 LSLSIMIALFMNRLNAKIALKEK 397 L++S++I+ MN N ++ L E+ Sbjct: 372 LAISLIISSGMNWYNNRMQLVER 394 >gi|153828789|ref|ZP_01981456.1| amino acid ABC transporter, permease protein [Vibrio cholerae 623-39] gi|148875742|gb|EDL73877.1| amino acid ABC transporter, permease protein [Vibrio cholerae 623-39] Length = 401 Score = 278 bits (712), Expect = 9e-73, Method: Compositional matrix adjust. Identities = 171/400 (42%), Positives = 238/400 (59%), Gaps = 9/400 (2%) Query: 3 KNARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIG 62 K +T + LY+ ++ Q++ +L VNN N+E ++ G Sbjct: 6 KATPETSDAHSKHTNLLYNPTFRSVVFQLLSVCVLAFFLYTIVNNALTNLESRGIATGFA 65 Query: 63 FLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN 122 FL + AGF I Q ++PY SY LVG +NT ++ G++ ATI+G L+G RLS+N Sbjct: 66 FLDQTAGFGISQSLIPYDETYSYGRTFLVGLLNTALVSVLGILLATILGFLIGIARLSSN 125 Query: 123 KLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLT 182 L++ + VY+E FRN+P L+ IFF Y VL LP S+ L +LN +GL Sbjct: 126 WLISRLAAVYIETFRNLPLLLQIFFWYFVVLQALPSARESMHLGEWFYLNIKGLYLAKPI 185 Query: 183 MDTNAKIFVFSFVLGI----VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLI 238 ++ + + + + GI VLS++AT R TG+ P+ L P LV Sbjct: 186 FESGSIWVLVALIAGIIACWVLSIWATNRQR----LTGQQTPMGRYILLLCVAFPVLVYF 241 Query: 239 ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQME 298 L + + PVL FNF GG +V PE +L +AL+ YTA+FIAEIVRSG+ AV GQ E Sbjct: 242 LLGQPITAEYPVLRGFNFQGGISVLPELAALLVALTIYTASFIAEIVRSGINAVSHGQTE 301 Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTII 357 AA++LGLT K +LV++PQA+R IIPPLTSQYLNL KNSSLA+A+G+ DLVSV GT + Sbjct: 302 AAMSLGLTRTKTLKLVIIPQALRIIIPPLTSQYLNLTKNSSLAMAIGYPDLVSVFAGTTL 361 Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 NQTGQAIEII + M +YL+LS++ + MN N K+AL E+ Sbjct: 362 NQTGQAIEIISMTMLVYLTLSLLTSALMNLYNRKVALVER 401 >gi|327395462|dbj|BAK12884.1| amino acid ABC transporter permease protein YhdX [Pantoea ananatis AJ13355] Length = 392 Score = 278 bits (711), Expect = 1e-72, Method: Compositional matrix adjust. Identities = 156/356 (43%), Positives = 222/356 (62%), Gaps = 1/356 (0%) Query: 43 WCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFS 102 + ++N N+ ++ G GFL AGF I Q ++ YT +YA LVG NT ++ Sbjct: 37 YLIHNTVINLANRGITSGFGFLERNAGFGIVQHLIDYTEGDTYARVFLVGLTNTLLVSAL 96 Query: 103 GMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHS 162 ++ A+++G +G RLS N L+ I +Y+E FRNIPPL+ IFF Y +VL LP P + Sbjct: 97 CIVFASVLGFFIGLARLSDNWLLRKIANIYIETFRNIPPLLQIFFWYFAVLRNLPGPRQA 156 Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222 + F++NRGL P T + FVF+ VL +V S R +R KTG+ Sbjct: 157 LNAFDLAFVSNRGLYVPWPTYAPGSWPFVFALVLAVVASYALFRFNRQHQLKTGQFRRTW 216 Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282 ++ ++ P + + +H+D P L FNF GG + PE +L +ALS YT++FIA Sbjct: 217 PVAILMLLLFPFIAHLGFGAAMHWDIPELRGFNFRGGFVMIPELAALTLALSIYTSSFIA 276 Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342 E++RSG+ AVP GQ EAA +LGL + R V++PQAMR IIPPLTSQYLN++KNSSLA Sbjct: 277 EVIRSGIQAVPYGQHEAARSLGLPNPVTLRQVIIPQAMRVIIPPLTSQYLNIVKNSSLAA 336 Query: 343 AVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 A+G+ D+VS+ GT++NQTGQAIE I I M +YL +S++I++ MN N KIAL E+ Sbjct: 337 AIGYPDMVSLFAGTVLNQTGQAIETIAITMSVYLIISLLISMLMNFYNRKIALVER 392 >gi|121588010|ref|ZP_01677762.1| amino acid ABC transporter, permease protein [Vibrio cholerae 2740-80] gi|121547751|gb|EAX57842.1| amino acid ABC transporter, permease protein [Vibrio cholerae 2740-80] Length = 401 Score = 278 bits (711), Expect = 1e-72, Method: Compositional matrix adjust. Identities = 171/400 (42%), Positives = 238/400 (59%), Gaps = 9/400 (2%) Query: 3 KNARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIG 62 K +T + LY+ ++ Q++ +L VNN N+E ++ G Sbjct: 6 KATPETSDAHSKHTNLLYNPTFRSVVFQLLAVCVLAFFLYTIVNNALTNLESRGIATGFA 65 Query: 63 FLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN 122 FL + AGF I Q ++PY SY LVG +NT ++ G++ ATI+G L+G RLS+N Sbjct: 66 FLDQTAGFGISQSLIPYDETYSYGRTFLVGLLNTALVSVLGILLATILGFLIGIARLSSN 125 Query: 123 KLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLT 182 L++ + VY+E FRN+P L+ IFF Y VL LP S+ L +LN +GL Sbjct: 126 WLISRLAAVYIETFRNLPLLLQIFFWYFVVLQALPSARESMHLGEWFYLNIKGLYLAKPI 185 Query: 183 MDTNAKIFVFSFVLGI----VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLI 238 ++ + + + + GI VLS++AT R TG+ P+ L P LV Sbjct: 186 FESGSIWVLVALIAGIIACWVLSIWATNRQR----LTGQQTPMGRYILLLCVTFPVLVYF 241 Query: 239 ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQME 298 L + + PVL FNF GG +V PE +L +AL+ YTA+FIAEIVRSG+ AV GQ E Sbjct: 242 LLGQPITAEYPVLRGFNFQGGISVLPELAALLVALTIYTASFIAEIVRSGINAVSHGQTE 301 Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTII 357 AA++LGLT K +LV++PQA+R IIPPLTSQYLNL KNSSLA+A+G+ DLVSV GT + Sbjct: 302 AAMSLGLTRTKTLKLVIIPQALRIIIPPLTSQYLNLTKNSSLAMAIGYPDLVSVFAGTTL 361 Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 NQTGQAIEII + M +YL+LS++ + MN N K+AL E+ Sbjct: 362 NQTGQAIEIISMTMLVYLTLSLLTSALMNLYNRKVALVER 401 >gi|15641373|ref|NP_231005.1| amino acid ABC transporter, permease protein [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121728524|ref|ZP_01681547.1| amino acid ABC transporter, permease protein [Vibrio cholerae V52] gi|147675096|ref|YP_001216920.1| amino acid ABC transporter, permease protein [Vibrio cholerae O395] gi|153819351|ref|ZP_01972018.1| amino acid ABC transporter, permease protein [Vibrio cholerae NCTC 8457] gi|227081532|ref|YP_002810083.1| amino acid ABC transporter, permease protein [Vibrio cholerae M66-2] gi|229505058|ref|ZP_04394568.1| amino acid ABC transporter permease protein [Vibrio cholerae BX 330286] gi|229511272|ref|ZP_04400751.1| amino acid ABC transporter permease protein [Vibrio cholerae B33] gi|229518390|ref|ZP_04407834.1| amino acid ABC transporter permease protein [Vibrio cholerae RC9] gi|229608062|ref|YP_002878710.1| amino acid ABC transporter permease protein [Vibrio cholerae MJ-1236] gi|254848483|ref|ZP_05237833.1| amino acid ABC transporter [Vibrio cholerae MO10] gi|255745748|ref|ZP_05419696.1| amino acid ABC transporter permease protein [Vibrio cholera CIRS 101] gi|262158974|ref|ZP_06030086.1| amino acid ABC transporter permease protein [Vibrio cholerae INDRE 91/1] gi|262169333|ref|ZP_06037025.1| amino acid ABC transporter permease protein [Vibrio cholerae RC27] gi|298498555|ref|ZP_07008362.1| amino acid ABC transporter [Vibrio cholerae MAK 757] gi|9655854|gb|AAF94519.1| amino acid ABC transporter, permease protein [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121629188|gb|EAX61628.1| amino acid ABC transporter, permease protein [Vibrio cholerae V52] gi|126510096|gb|EAZ72690.1| amino acid ABC transporter, permease protein [Vibrio cholerae NCTC 8457] gi|146316979|gb|ABQ21518.1| amino acid ABC transporter, permease protein [Vibrio cholerae O395] gi|227009420|gb|ACP05632.1| amino acid ABC transporter, permease protein [Vibrio cholerae M66-2] gi|227013278|gb|ACP09488.1| amino acid ABC transporter, permease protein [Vibrio cholerae O395] gi|229345105|gb|EEO10079.1| amino acid ABC transporter permease protein [Vibrio cholerae RC9] gi|229351237|gb|EEO16178.1| amino acid ABC transporter permease protein [Vibrio cholerae B33] gi|229357281|gb|EEO22198.1| amino acid ABC transporter permease protein [Vibrio cholerae BX 330286] gi|229370717|gb|ACQ61140.1| amino acid ABC transporter permease protein [Vibrio cholerae MJ-1236] gi|254844188|gb|EET22602.1| amino acid ABC transporter [Vibrio cholerae MO10] gi|255736823|gb|EET92220.1| amino acid ABC transporter permease protein [Vibrio cholera CIRS 101] gi|262022146|gb|EEY40855.1| amino acid ABC transporter permease protein [Vibrio cholerae RC27] gi|262029159|gb|EEY47811.1| amino acid ABC transporter permease protein [Vibrio cholerae INDRE 91/1] gi|297542888|gb|EFH78938.1| amino acid ABC transporter [Vibrio cholerae MAK 757] Length = 401 Score = 278 bits (711), Expect = 1e-72, Method: Compositional matrix adjust. Identities = 171/400 (42%), Positives = 238/400 (59%), Gaps = 9/400 (2%) Query: 3 KNARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIG 62 K +T + LY+ ++ Q++ +L VNN N+E ++ G Sbjct: 6 KATPETSDAHSKHTNLLYNPTFRSVVFQLLAVCVLAFFLYTIVNNALTNLESRGIATGFA 65 Query: 63 FLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN 122 FL + AGF I Q ++PY SY LVG +NT ++ G++ ATI+G L+G RLS+N Sbjct: 66 FLEQTAGFGISQSLIPYDETYSYGRTFLVGLLNTALVSVLGILLATILGFLIGIARLSSN 125 Query: 123 KLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLT 182 L++ + VY+E FRN+P L+ IFF Y VL LP S+ L +LN +GL Sbjct: 126 WLISRLAAVYIETFRNLPLLLQIFFWYFVVLQALPSARESMHLGEWFYLNIKGLYLAKPI 185 Query: 183 MDTNAKIFVFSFVLGI----VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLI 238 ++ + + + + GI VLS++AT R TG+ P+ L P LV Sbjct: 186 FESGSIWVLVALIAGIIACWVLSIWATNRQR----LTGQQTPMGRYILLLCVTFPVLVYF 241 Query: 239 ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQME 298 L + + PVL FNF GG +V PE +L +AL+ YTA+FIAEIVRSG+ AV GQ E Sbjct: 242 LLGQPITAEYPVLRGFNFQGGISVLPELAALLVALTIYTASFIAEIVRSGINAVSHGQTE 301 Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTII 357 AA++LGLT K +LV++PQA+R IIPPLTSQYLNL KNSSLA+A+G+ DLVSV GT + Sbjct: 302 AAMSLGLTRTKTLKLVIIPQALRIIIPPLTSQYLNLTKNSSLAMAIGYPDLVSVFAGTTL 361 Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 NQTGQAIEII + M +YL+LS++ + MN N K+AL E+ Sbjct: 362 NQTGQAIEIISMTMLVYLTLSLLTSALMNLYNRKVALVER 401 >gi|153835220|ref|ZP_01987887.1| general L-amino acid transport system permease protein AapQ [Vibrio harveyi HY01] gi|148868286|gb|EDL67418.1| general L-amino acid transport system permease protein AapQ [Vibrio harveyi HY01] Length = 401 Score = 278 bits (711), Expect = 1e-72, Method: Compositional matrix adjust. Identities = 170/392 (43%), Positives = 239/392 (60%), Gaps = 1/392 (0%) Query: 7 KTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSE 66 T+++ +Y+ + QII L F +NN N+E ++ G GFL++ Sbjct: 10 STMSKPSGSKSLIYNPAFRSALFQIIAVAALVFFFYTIINNALTNLEARGIATGFGFLNQ 69 Query: 67 RAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVA 126 AGF I ++ Y SY +VG +NT ++ G+I AT+IG ++G RLS+N LV+ Sbjct: 70 EAGFGIGLTLIEYDETFSYGRTFVVGLLNTALVSVLGIILATVIGFVMGIARLSSNWLVS 129 Query: 127 WICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTN 186 + VY+E FRNIP L+ IFF Y +VL LP P S+ L +FLN RGL FP M+ Sbjct: 130 RLAAVYIETFRNIPLLLQIFFWYFAVLQALPSPRQSMSLGEAIFLNVRGLYFPAPVMEAG 189 Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246 + + + ++GI+ S+ + + TG+ P+ I L+ LP +V + Sbjct: 190 SSFVIAALIIGIIASILINVWANNKQRLTGQQTPMGRIVFGLVIVLPLVVYFLAGMPISL 249 Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306 P L FNF GG ++ PE +L +ALS YTA+FIAEIVRSG+ AV GQ EAA++LGL Sbjct: 250 QYPELKGFNFRGGISIIPELAALLLALSVYTASFIAEIVRSGINAVSHGQTEAAMSLGLP 309 Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIE 365 K +LV++PQA+R IIPPLTSQYLNL KNSSLA+A+G+ DLVSV GT +NQTGQAIE Sbjct: 310 RTKTLKLVVIPQALRIIIPPLTSQYLNLTKNSSLAMAIGYPDLVSVFAGTTLNQTGQAIE 369 Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 II + M +YL+LS++ + MN N K+AL E+ Sbjct: 370 IIAMTMGVYLTLSLITSALMNVYNRKVALVER 401 >gi|330429591|gb|AEC20925.1| putative amino acid ABC transporter permease protein [Pusillimonas sp. T7-7] Length = 394 Score = 278 bits (711), Expect = 1e-72, Method: Compositional matrix adjust. Identities = 162/355 (45%), Positives = 223/355 (62%), Gaps = 1/355 (0%) Query: 43 WCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFS 102 + V+N +N+ N+S G FL AGF I + ++ YT +Y AI VG +NT ++ Sbjct: 41 YLVSNTLHNLAIRNISTGFDFLHREAGFAIGESVIDYTPADTYGRAIWVGILNTLRVSVV 100 Query: 103 GMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHS 162 G+I AT+ GT++G RLS N LV+ + YVEV RNIP L+ +FF Y + V+P P + Sbjct: 101 GIIAATLFGTMLGIARLSKNWLVSRVASAYVEVMRNIPLLLQLFFWYAIITEVMPGPRSA 160 Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222 + G+F++NRGL P L D V L IV + ++ E TG PL+ Sbjct: 161 LNPIPGVFISNRGLKMPALQGDA-LDWMVAGLGLAIVAIIVLGHWAKKRQEATGIIFPLV 219 Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282 + L+ LP + L + PV+ FNF GG ++SPEF++L L YT+AF+A Sbjct: 220 RAALGLLVVLPVAGWLISGASLSLEMPVMKGFNFSGGISLSPEFVALLTGLIIYTSAFVA 279 Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342 E+VRSG+ +V RGQ EAA A+GL R+ RLV+LPQA+R I+PP+TSQYLNL KNSSLAV Sbjct: 280 EVVRSGIQSVNRGQWEAAEAIGLPRRRLLRLVILPQALRVIVPPMTSQYLNLTKNSSLAV 339 Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 AVG+ D+VSV T +NQTGQAIE ILI M YL++S+ I++FMN N +IAL E+ Sbjct: 340 AVGYPDIVSVVNTTLNQTGQAIEGILIIMAAYLTVSLSISIFMNWYNKRIALVER 394 >gi|92117598|ref|YP_577327.1| amino acid ABC transporter permease [Nitrobacter hamburgensis X14] gi|91800492|gb|ABE62867.1| amino acid ABC transporter membrane protein 1, PAAT family [Nitrobacter hamburgensis X14] Length = 401 Score = 278 bits (710), Expect = 1e-72, Method: Compositional matrix adjust. Identities = 166/397 (41%), Positives = 238/397 (59%), Gaps = 5/397 (1%) Query: 1 MIKNARKTVTRYFSRMKFLYDMRV--HNISVQIILALLLTVIFLWCVNNVYNNMEKSNLS 58 M RK + F +++ R +++Q++ L I V N N+E +++ Sbjct: 1 MAAEPRKPPLQLFLKLRRALGGRAGWDGLALQVLFVAALAWIGYEIVANARGNLETQHVA 60 Query: 59 LGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGR 118 G F+S AGF + Q ++PY+ +Y LVG +NT +A G+ ATIIG +V GR Sbjct: 61 SGFDFMSRTAGFGVSQSLIPYSETDTYTRVFLVGLLNTLLVAVVGIFFATIIGFIVALGR 120 Query: 119 LSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSF 178 LS N L++ I YVE+ RN+P L I F Y +VL LP P S+ + FLNNRGL Sbjct: 121 LSPNWLISRISGGYVELVRNLPLLFQILFWYLAVLGALPSPRQSVSIFDSFFLNNRGLVI 180 Query: 179 PTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL-YISTFLIFGLPTLVL 237 P + + V IV L SR ++G+ + + Y+ST L+ G+P V+ Sbjct: 181 PKPIGHEGLVALMIAIVAAIVGCLLLRSYSRRALFQSGRVVIVWPYVSTLLV-GVPLAVM 239 Query: 238 IALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQM 297 + F+ PVL FNF GG+ V+PEF++L IALS YTAAFIAE+VR+G+++V +GQM Sbjct: 240 MIFGAPFTFEMPVLKGFNFSGGARVTPEFVALAIALSTYTAAFIAEVVRAGILSVHKGQM 299 Query: 298 EAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTI 356 EA +LGL+ RL+++PQAMR I+PPLT+QYLNL KNSSLAVA+G+ DL SV GT Sbjct: 300 EAGASLGLSRGSTLRLIVVPQAMRVILPPLTNQYLNLTKNSSLAVAIGYPDLFSVFAGTT 359 Query: 357 INQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393 ++QTGQAIEII I M +YL +S++ + M+ ++A Sbjct: 360 LSQTGQAIEIIAITMGVYLLISLVTSTIMSFYGWRLA 396 >gi|281180311|dbj|BAI56641.1| amino acid ABC transporter permease component [Escherichia coli SE15] Length = 399 Score = 278 bits (710), Expect = 1e-72, Method: Compositional matrix adjust. Identities = 157/369 (42%), Positives = 226/369 (61%), Gaps = 1/369 (0%) Query: 30 QIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAI 89 QI+ + I W +N N+ ++ G FL AGF I Q ++ Y +Y Sbjct: 31 QILAVVAAVSIVGWLFHNTVTNLSNRGITSGFAFLDRGAGFGIVQHLIDYQQGDTYGRIF 90 Query: 90 LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 +VG +NT ++ ++ A+++G +G RLS N L+ + +Y+E+FRNIPPL+ IFF Y Sbjct: 91 IVGLLNTLLVSALCIVFASVLGFFIGLARLSDNWLLRKLSTIYIEIFRNIPPLLQIFFWY 150 Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209 +VL LP P ++ FL+NRGL P+ + F+ + V+ IVLS+ R ++ Sbjct: 151 FAVLRNLPGPRQAVSAFDLAFLSNRGLYIPSPQLGDGFIAFILAVVMAIVLSVGLFRFNK 210 Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269 + KTG+ + LI GLP L LH+D P L FNF GG + PE +L Sbjct: 211 TYQIKTGQLRRTWPFAAVLIIGLPLLAQWLFGAALHWDVPALRGFNFRGGMVLIPELAAL 270 Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329 +ALS YT+AFIAEI+R+G+ AVP GQ EAA +LGL + R V++PQA+R IIPPLTS Sbjct: 271 TLALSIYTSAFIAEIIRAGIQAVPYGQHEAARSLGLPNPVTLRQVIIPQALRVIIPPLTS 330 Query: 330 QYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388 QYLN++KNSSLA A+G+ D+VS+ GT++NQTGQAIE I + M +YL +S+ I+L MN Sbjct: 331 QYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAMTMSVYLIISLTISLLMNIY 390 Query: 389 NAKIALKEK 397 N +IA+ E+ Sbjct: 391 NRRIAIVER 399 >gi|144899135|emb|CAM75999.1| binding-protein-dependent transport system inner membrane component [Magnetospirillum gryphiswaldense MSR-1] Length = 394 Score = 278 bits (710), Expect = 1e-72, Method: Compositional matrix adjust. Identities = 155/380 (40%), Positives = 233/380 (61%), Gaps = 1/380 (0%) Query: 18 FLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIV 77 +Y R I Q+ + + + + V+N N+ ++ G GF+ + AGF+I +G++ Sbjct: 16 LVYSARFRGIVYQVAVVAGVLALGWYLVHNTLANLAARGIATGFGFMGQEAGFDIGEGLI 75 Query: 78 PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137 Y++ +Y A++VG +NT +A G+ A+++G +VG RLS N LVA + YVE R Sbjct: 76 AYSAADTYLRALVVGVLNTLKVAVLGIALASLLGLVVGIARLSRNWLVARLATFYVETVR 135 Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLG 197 N+P L+ +F Y +++ LP P ++ L G+F++NRGL P + + + Sbjct: 136 NVPLLLQLFVWY-GIVTALPGPRQALDLGLGVFISNRGLKVPVPEWHDSYWLAMLLLAAA 194 Query: 198 IVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFI 257 + R + + +TG+ P L + + LP L + L + P L FNF Sbjct: 195 FIGLFVLRRWAINRLYRTGRPFPWLSVGLAGLVVLPWLGFLLTGTPLVWSIPELKGFNFQ 254 Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317 GG+ +SPEF +L L+ YTA+FIAEIVRSG++AVP GQ EAA++LGL+ K RLV+LP Sbjct: 255 GGADLSPEFAALLAGLTVYTASFIAEIVRSGILAVPHGQTEAALSLGLSRAKTLRLVVLP 314 Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377 QA+R I+PPLTSQYLNLLKNSSLAVA+G+ DLVSV T INQTGQA+E + + M ++L + Sbjct: 315 QALRVIVPPLTSQYLNLLKNSSLAVAIGYPDLVSVANTAINQTGQAVEGVALTMAVFLVI 374 Query: 378 SIMIALFMNRLNAKIALKEK 397 S+ ++L MN NAK+AL + Sbjct: 375 SLALSLLMNWYNAKVALVSR 394 >gi|156974644|ref|YP_001445551.1| ABC transporter permease [Vibrio harveyi ATCC BAA-1116] gi|156526238|gb|ABU71324.1| hypothetical protein VIBHAR_02362 [Vibrio harveyi ATCC BAA-1116] Length = 390 Score = 277 bits (709), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 169/382 (44%), Positives = 235/382 (61%), Gaps = 1/382 (0%) Query: 17 KFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGI 76 +Y+ + QII L F +NN N+E ++ G GFL++ AGF I + Sbjct: 9 SLIYNPAFRSALFQIIAVAALVFFFYTIINNALTNLEARGIATGFGFLNQEAGFGIGLTL 68 Query: 77 VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136 + Y SY +VG +NT ++ G+I AT+IG ++G RLS+N LV+ + VY+E F Sbjct: 69 IEYDETFSYGRTFVVGLLNTALVSVLGIILATVIGFVMGIARLSSNWLVSRLAAVYIETF 128 Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196 RNIP L+ IFF Y +VL LP P S+ L +FLN RGL FP M+ + + + ++ Sbjct: 129 RNIPLLLQIFFWYFAVLQALPSPRQSMSLGEAIFLNVRGLYFPAPVMEAGSSFVIAALII 188 Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256 GI+ S+ + + TG+ P+ I L+ LP +V + P L FNF Sbjct: 189 GIIASILINVWANNKQRLTGQQTPMGRIVFGLVIVLPLVVYFLAGMPISLQYPELKGFNF 248 Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316 GG ++ PE +L +ALS YTA+FIAEIVRSG+ AV GQ EAA++LGL K +LV++ Sbjct: 249 RGGISIIPELAALLLALSVYTASFIAEIVRSGINAVSHGQTEAAMSLGLPRTKTLKLVVI 308 Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYL 375 PQA+R IIPPLTSQYLNL KNSSLA+A+G+ DLVSV GT +NQTGQAIEII + M +YL Sbjct: 309 PQALRIIIPPLTSQYLNLTKNSSLAMAIGYPDLVSVFAGTTLNQTGQAIEIIAMTMGVYL 368 Query: 376 SLSIMIALFMNRLNAKIALKEK 397 +LS++ + MN N K+AL E+ Sbjct: 369 TLSLITSALMNVYNRKVALVER 390 >gi|326797352|ref|YP_004315172.1| polar amino acid ABC transporter inner membrane subunit [Marinomonas mediterranea MMB-1] gi|326548116|gb|ADZ93336.1| polar amino acid ABC transporter, inner membrane subunit [Marinomonas mediterranea MMB-1] Length = 390 Score = 277 bits (709), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 156/354 (44%), Positives = 223/354 (62%), Gaps = 4/354 (1%) Query: 46 NNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMI 105 +N+ N+E +S G FL+E AGF + ++ YT +Y A V +NTF ++ G+I Sbjct: 39 SNLQANLETRGISTGFSFLNEPAGFPVLIHLIEYTEADTYGRAFAVALINTFVISLLGII 98 Query: 106 PATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVL 165 AT+IG ++G RLS N LVA + VY+E RNIP L+ +FF Y +VL+ +P P +SIV Sbjct: 99 LATVIGVIMGLARLSNNWLVARLATVYIETLRNIPLLLQMFFWYFAVLAAMPHPRNSIV- 157 Query: 166 PFG-MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224 FG F+N RG+ P + + +F+L IV + F R ++ + TG P + Sbjct: 158 -FGDFFINKRGIYSPNPQFQDGSGFVLAAFLLSIVGAFFIVRWAKARQKATGNWFPAYWA 216 Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284 S I G+ L + + + FD P +FN GG + PEF+++ IALS YT +FIAEI Sbjct: 217 SFGTIIGVTLLAFVVTGFPVEFDLPSKSRFNVTGGMVLVPEFVAVLIALSTYTGSFIAEI 276 Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344 VR+G+++V GQ EA+ +LGL K RL++LPQA+R IIPPLTSQYLNL KNSSL A+ Sbjct: 277 VRAGILSVNWGQTEASRSLGLPDGKTQRLIVLPQALRVIIPPLTSQYLNLAKNSSLGAAI 336 Query: 345 GFADLVS-VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 + +LV+ V GT +NQTGQAIE I + M +Y SLS+ I+LFMN N +++L E+ Sbjct: 337 AYPELVAVVMGTTLNQTGQAIETIGLCMLVYGSLSLSISLFMNWYNKRMSLVER 390 >gi|227325811|ref|ZP_03829835.1| Polar amino acid ABC transporter, inner membrane subunit [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 407 Score = 277 bits (709), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 154/369 (41%), Positives = 232/369 (62%), Gaps = 3/369 (0%) Query: 30 QIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAI 89 Q +L LL+ W NV N+ N++ G FL A FEI + ++ +T SY A+ Sbjct: 41 QCLLGLLIVAFSYWLYANVVENLRSQNIATGFSFLDHTAQFEIGEKLIAFTPRDSYLRAL 100 Query: 90 LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 VG +NT ++ G++ AT++G VG R+S N L+A + YVE+ RNIP ++ + F + Sbjct: 101 GVGLLNTLYVTLCGIVLATLLGFSVGIARVSRNWLLARLAGGYVELMRNIPVILQVIF-W 159 Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL-SLFATRLS 208 V+ LP P +I L FL NRGLSF ++ + ++ S +L VL SL R++ Sbjct: 160 SVVIRNLPSPRDAIELGSLGFLTNRGLSF-SVPAAHHGWMWTGSALLAAVLISLILKRVA 218 Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268 R+ E G++LP ++ I GLP LV D+P+L FNF GG TVSPEF + Sbjct: 219 RYMRENVGRSLPTGRLTLAAIIGLPLLVWWLSGAPAELDRPILRGFNFRGGFTVSPEFTA 278 Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328 L + ++ Y++AFIAEIVR+G+ ++P+GQ+EAA AL + R +++PQAMR I+PPLT Sbjct: 279 LLLGIALYSSAFIAEIVRAGIQSIPKGQLEAARALSFSPWHMMRHIIIPQAMRVIVPPLT 338 Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388 SQY++L KNSS+AV VG+ +L ++ T++NQTGQA+E+I I M +YL++SI+ +L MN Sbjct: 339 SQYVSLSKNSSIAVVVGYPELANISNTLMNQTGQALEVIAIMMVVYLTVSIVTSLLMNLF 398 Query: 389 NAKIALKEK 397 N +A+KE+ Sbjct: 399 NRVVAIKER 407 >gi|323966447|gb|EGB61881.1| inner membrane transport system [Escherichia coli M863] gi|327251363|gb|EGE63052.1| general L-amino acid transport system permease protein aapQ [Escherichia coli STEC_7v] Length = 393 Score = 277 bits (709), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 155/369 (42%), Positives = 227/369 (61%), Gaps = 1/369 (0%) Query: 30 QIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAI 89 QI+ + + I W +N N+ ++ G FL AGF I Q ++ Y +Y Sbjct: 25 QILAVVAVVGIVGWLFHNTVTNLSNRGITSGFAFLDRGAGFGIVQHLIDYQQGDTYGRVF 84 Query: 90 LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 +VG +NT ++ ++ A+++G +G RLS N L+ + +Y+E+FRNIPPL+ IFF Y Sbjct: 85 IVGLLNTLLVSALCIVFASVLGFFIGLARLSDNWLLRKLSTIYIEIFRNIPPLLQIFFWY 144 Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209 +VL LP P ++ FL+NRGL P+ + F+ + V+ I +S+ R ++ Sbjct: 145 FAVLRNLPGPRQAVSAFDLAFLSNRGLYIPSPQLGDGFIAFILTVVIAIAISVGIFRFNK 204 Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269 + KTG+ ++ LI GLP L LH+D P L FNF GG + PE +L Sbjct: 205 TYQIKTGQLRRTWPVAVVLIIGLPLLAQWLFGAALHWDVPALRGFNFRGGMVLIPELAAL 264 Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329 +ALS YT+AFIAEI+R+G+ AVP GQ EAA +LGL + R V++PQA+R IIPPLTS Sbjct: 265 TLALSVYTSAFIAEIIRAGIQAVPYGQHEAARSLGLPNPVTLRQVIIPQALRVIIPPLTS 324 Query: 330 QYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388 QYLN++KNSSLA A+G+ D+VS+ GT++NQTGQAIE I + M +YL +S+ I+L MN Sbjct: 325 QYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAMTMSVYLIISLTISLLMNIY 384 Query: 389 NAKIALKEK 397 N +IA+ E+ Sbjct: 385 NRRIAIVER 393 >gi|293412638|ref|ZP_06655361.1| conserved hypothetical protein [Escherichia coli B354] gi|291469409|gb|EFF11900.1| conserved hypothetical protein [Escherichia coli B354] Length = 393 Score = 277 bits (708), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 155/369 (42%), Positives = 227/369 (61%), Gaps = 1/369 (0%) Query: 30 QIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAI 89 QI+ + + I W +N N+ ++ G FL AGF I Q ++ Y +Y Sbjct: 25 QILAVVAVVGIVGWLFHNTVTNLNNRGITSGFAFLDRGAGFGIVQHLIDYQQGDTYGRVF 84 Query: 90 LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 +VG +NT ++ ++ A+++G +G RLS N L+ + +Y+E+FRNIPPL+ IFF Y Sbjct: 85 IVGLLNTLLVSALCIVFASVLGFFIGLARLSDNWLLRKLSTIYIEIFRNIPPLLQIFFWY 144 Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209 +VL LP P ++ FL+NRGL P+ + F+ + V+ I +S+ R ++ Sbjct: 145 FAVLRNLPGPRQAVSAFDLAFLSNRGLYIPSPQLGDGFIAFIVTVVIAIAISVGLFRFNK 204 Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269 + KTG+ ++ LI GLP L LH+D P L FNF GG + PE +L Sbjct: 205 TYQIKTGQLRRTWPVAVMLIIGLPLLAQWLFGAALHWDVPALRGFNFRGGMVLIPELAAL 264 Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329 +ALS YT+AFIAEI+R+G+ AVP GQ EAA +LGL + R V++PQA+R IIPPLTS Sbjct: 265 TLALSVYTSAFIAEIIRAGIQAVPYGQHEAARSLGLPNPVTLRQVIIPQALRVIIPPLTS 324 Query: 330 QYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388 QYLN++KNSSLA A+G+ D+VS+ GT++NQTGQAIE I + M +YL +S+ I+L MN Sbjct: 325 QYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAMTMSVYLIISLTISLLMNIY 384 Query: 389 NAKIALKEK 397 N +IA+ E+ Sbjct: 385 NRRIAIVER 393 >gi|300937396|ref|ZP_07152231.1| ABC transporter, permease protein [Escherichia coli MS 21-1] gi|300457570|gb|EFK21063.1| ABC transporter, permease protein [Escherichia coli MS 21-1] Length = 399 Score = 277 bits (708), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 157/369 (42%), Positives = 227/369 (61%), Gaps = 1/369 (0%) Query: 30 QIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAI 89 QI+ + + I W +N N+ ++ G FL AGF I Q ++ Y +Y Sbjct: 31 QILAVVAVVGIVGWLFHNTVTNLSNRGITSGFAFLDRGAGFGIVQHLIDYQQGDTYGRVF 90 Query: 90 LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 +VG +NT ++ ++ A+++G +G RLS N L+ + +Y+E+FRNIPPL+ IFF Y Sbjct: 91 IVGLLNTLLVSALCIVFASVLGFFIGLARLSDNWLLRKLSTIYIEIFRNIPPLLQIFFWY 150 Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209 +VL LP P ++ FL+NRGL P+ + F+ + V+ IVLS+ ++ Sbjct: 151 FAVLRNLPGPRQAVSAFDLAFLSNRGLYIPSPQLGDGFIAFILAVVMAIVLSVGLFLFNK 210 Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269 + KTG+ I+ LI GLP L LH+D P L FNF GG + PE +L Sbjct: 211 TYQIKTGQLRRTWPIAAVLIIGLPLLAQWLFGAALHWDVPALRGFNFRGGMVLIPELAAL 270 Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329 +ALS YT+AFIAEI+R+G+ AVP GQ EAA +LGL + R V++PQA+R IIPPLTS Sbjct: 271 TLALSVYTSAFIAEIIRAGIQAVPYGQHEAARSLGLPNPVTLRQVIIPQALRVIIPPLTS 330 Query: 330 QYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388 QYLN++KNSSLA A+G+ D+VS+ GT++NQTGQAIE I + M +YL +S+ I+L MN Sbjct: 331 QYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAMTMSVYLIISLTISLLMNIY 390 Query: 389 NAKIALKEK 397 N +IA+ E+ Sbjct: 391 NRRIAIVER 399 >gi|218702041|ref|YP_002409670.1| amino-acid ABC transporter membrane protein [Escherichia coli IAI39] gi|218372027|emb|CAR19885.1| amino-acid transporter subunit ; membrane component of ABC superfamily [Escherichia coli IAI39] Length = 393 Score = 277 bits (708), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 157/369 (42%), Positives = 227/369 (61%), Gaps = 1/369 (0%) Query: 30 QIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAI 89 QI+ + + I W +N N+ ++ G FL AGF I Q ++ Y +Y Sbjct: 25 QILAVVAVVGIVGWLFHNTVTNLSNRGITSGFAFLDRGAGFGIVQHLIDYQQGDTYGRVF 84 Query: 90 LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 +VG +NT ++ ++ A+++G +G RLS N L+ + +Y+E+FRNIPPL+ IFF Y Sbjct: 85 IVGLLNTLLVSALCIVFASVLGFFIGLARLSDNWLLRKLSTIYIEIFRNIPPLLQIFFWY 144 Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209 +VL LP P ++ FL+NRGL P+ + F+ + V+ IVLS+ ++ Sbjct: 145 FAVLRNLPGPRQAVSAFDLAFLSNRGLYIPSPQLGDGFIAFILAVVMAIVLSVGLFLFNK 204 Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269 + KTG+ I+ LI GLP L LH+D P L FNF GG + PE +L Sbjct: 205 TYQIKTGQLRRTWPIAAVLIIGLPLLAQWLFGAALHWDVPALRGFNFRGGMVLIPELAAL 264 Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329 +ALS YT+AFIAEI+R+G+ AVP GQ EAA +LGL + R V++PQA+R IIPPLTS Sbjct: 265 TLALSVYTSAFIAEIIRAGIQAVPYGQHEAARSLGLPNPVTLRQVIIPQALRVIIPPLTS 324 Query: 330 QYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388 QYLN++KNSSLA A+G+ D+VS+ GT++NQTGQAIE I + M +YL +S+ I+L MN Sbjct: 325 QYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAMTMSVYLIISLTISLLMNIY 384 Query: 389 NAKIALKEK 397 N +IA+ E+ Sbjct: 385 NRRIAIVER 393 >gi|331684910|ref|ZP_08385502.1| putative amino-acid ABC transporter permease protein YhdX [Escherichia coli H299] gi|331078525|gb|EGI49731.1| putative amino-acid ABC transporter permease protein YhdX [Escherichia coli H299] Length = 393 Score = 277 bits (708), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 152/356 (42%), Positives = 221/356 (62%), Gaps = 1/356 (0%) Query: 43 WCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFS 102 W +N N+ ++ G FL AGF I Q ++ Y +Y +VG +NT ++ Sbjct: 38 WLFHNTVTNLSNRGITSGFAFLDRGAGFGIVQHLIDYQQGDTYGRVFIVGLLNTLLVSAL 97 Query: 103 GMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHS 162 ++ A+++G +G RLS N L+ + +Y+E+FRNIPPL+ IFF Y +VL LP P + Sbjct: 98 CIVFASVLGFFIGLARLSDNWLLRKLSTIYIEIFRNIPPLLQIFFWYFAVLRNLPRPRQA 157 Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222 + FL+NRGL P+ + F+ + V+ I +S+ R ++ + KTG+ Sbjct: 158 VSAFDLAFLSNRGLYIPSPQLGDGFIAFILTVVIAIAISVGLFRFNKTYQIKTGQLRRTW 217 Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282 ++ LI GLP L LH+D P L FNF GG + PE +L +ALS YT+AFIA Sbjct: 218 PVAVVLIIGLPLLAQWLFGAALHWDVPALRGFNFRGGMVLIPELAALTLALSVYTSAFIA 277 Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342 EI+R+G+ AVP GQ EAA +LGL + R V++PQA+R IIPPLTSQYLN++KNSSLA Sbjct: 278 EIIRAGIQAVPYGQHEAARSLGLPNPVTLRQVIIPQALRVIIPPLTSQYLNIVKNSSLAA 337 Query: 343 AVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 A+G+ D+VS+ GT++NQTGQAIE I + M +YL +S+ I+L MN N +IA+ E+ Sbjct: 338 AIGYPDMVSLFAGTVLNQTGQAIETIAMTMSVYLIISLTISLLMNIYNRRIAIVER 393 >gi|253690350|ref|YP_003019540.1| polar amino acid ABC transporter, inner membrane subunit [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251756928|gb|ACT15004.1| polar amino acid ABC transporter, inner membrane subunit [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 407 Score = 277 bits (708), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 149/368 (40%), Positives = 228/368 (61%), Gaps = 1/368 (0%) Query: 30 QIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAI 89 Q +L LL+ W NV N+ N++ G GFL A FEI + ++ +T SY A+ Sbjct: 41 QCLLGLLIVAFSYWLYANVVENLRSQNIATGFGFLDHTAQFEIGEKLIAFTPRDSYLRAL 100 Query: 90 LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 VG +NT ++ G++ AT++G VG R+S N L+A + Y+E+ RNIP ++ + F + Sbjct: 101 GVGLLNTLYITLCGIVLATLLGFSVGIARVSRNWLLARLAGGYIEMMRNIPVILQVIF-W 159 Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209 V+ LP P +I L FL NRGLSF + + +++SL R++R Sbjct: 160 SVVIRNLPSPRDAIELGNLGFLTNRGLSFAVPAAHHGWLWTGIALLAAVLISLILNRVAR 219 Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269 + E G++LP ++ + GLP LV D+P+L FNF GG TVSPEF +L Sbjct: 220 YVRESRGRSLPTGRLTLAALIGLPLLVWWLSGAPAELDRPILRGFNFRGGFTVSPEFTAL 279 Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329 + ++ Y++AFIAEIVR+G+ ++P+GQ+EAA AL + R +++PQAMR I+PPLTS Sbjct: 280 LLGIALYSSAFIAEIVRAGIQSIPKGQLEAARALSFSPWHMMRHIIIPQAMRVIVPPLTS 339 Query: 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 QY++L KNSS+AV VG+ +L ++ T++NQTGQA+E+I I M +YL++SI+ +L MN N Sbjct: 340 QYVSLSKNSSIAVVVGYPELANISNTLMNQTGQALEVIAIMMVVYLTVSIVTSLLMNLFN 399 Query: 390 AKIALKEK 397 +A+KE+ Sbjct: 400 RVVAIKER 407 >gi|330975707|gb|EGH75773.1| polar amino acid ABC transporter, inner membrane subunit [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 393 Score = 277 bits (708), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 156/380 (41%), Positives = 232/380 (61%), Gaps = 1/380 (0%) Query: 19 LYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVP 78 L D +V QII + + + + +N N++ ++ G GFL AGF I Q ++ Sbjct: 14 LSDPKVRAWLFQIITVVAVIALGWFIFDNTQTNLQHRGITSGFGFLENSAGFGIAQHLID 73 Query: 79 YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138 Y+ SYA ++G +NT ++ G++ AT++G ++G RLS N +++ + VYVEVFRN Sbjct: 74 YSEADSYARVFVIGLLNTLLVSVIGIVLATLLGFVIGVARLSPNWMISKLATVYVEVFRN 133 Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198 IPPL+ I F Y +V LP P + F+++RGL+ P A F+ S V+ + Sbjct: 134 IPPLLQILFWYTAVFLTLPGPRQAHGYLDMFFVSSRGLNMPRALPAEGAWAFLASLVVAV 193 Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258 + + R + E TG+ ++ L+ +P L ++ +H++ P L FNF G Sbjct: 194 IAIVMMVRWANKRFEATGQPFHKFWVGLALLLVIPGLSVLIFGSPVHWELPQLKGFNFSG 253 Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G + PE +SL +AL+ YTAAFIAEIVRSG+ +V GQ EAA +LGL R V++PQ Sbjct: 254 GWVLIPELISLTLALTIYTAAFIAEIVRSGIKSVSHGQTEAARSLGLRPGPTLRKVIIPQ 313 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSL 377 A+R IIPPLTSQ+LNL K SSLA A+G+ ++VS+ GT++NQTGQAIE+I I M +YL++ Sbjct: 314 ALRVIIPPLTSQFLNLAKKSSLAAAIGYPEMVSLFAGTVLNQTGQAIEVIAITMSVYLAI 373 Query: 378 SIMIALFMNRLNAKIALKEK 397 SI I+L MN N +IAL E+ Sbjct: 374 SISISLLMNWYNKRIALIER 393 >gi|316934241|ref|YP_004109223.1| polar amino acid ABC transporter inner membrane subunit [Rhodopseudomonas palustris DX-1] gi|315601955|gb|ADU44490.1| polar amino acid ABC transporter, inner membrane subunit [Rhodopseudomonas palustris DX-1] Length = 401 Score = 277 bits (708), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 155/389 (39%), Positives = 236/389 (60%), Gaps = 3/389 (0%) Query: 1 MIKNARKTVTRYFSRMKFLYDMRV--HNISVQIILALLLTVIFLWCVNNVYNNMEKSNLS 58 M +AR ++ ++++ R + Q++ +L I V+N +N+ ++ Sbjct: 1 MAIDARPPPPQFVAKLRRALGGRSGWKGLIAQVLFVAVLCWIGYEIVDNARDNLANQRIA 60 Query: 59 LGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGR 118 G GF+S+ AGF + Q ++PY SY LVG VNT ++ G++ AT+IG +V GR Sbjct: 61 SGFGFMSQTAGFGVSQTLIPYQESDSYTRVFLVGLVNTLLVSAVGIVIATVIGFMVALGR 120 Query: 119 LSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSF 178 LS N L++ I YVE+ RN+P L I F Y +VL LP P S+ L FL+NRG+ Sbjct: 121 LSPNWLISRIAGGYVEIVRNLPLLFQILFWYLAVLGTLPAPRQSVSLLDSFFLSNRGIVV 180 Query: 179 PTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLI 238 P + F+ + ++ + ++ +R TGK + + + L+ GLP + + Sbjct: 181 PRPVGEAGLDGFLVAVLIAVTAAIALPLYARRRLFATGKPMRVWPVVIGLLIGLPLVAVA 240 Query: 239 ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQME 298 F+ PVL FNF GGS + PEF++L +ALS YTAAFIAE+VR+G+++V +GQME Sbjct: 241 IFGRPFSFEVPVLRGFNFAGGSRLPPEFVALTLALSTYTAAFIAEVVRAGILSVHKGQME 300 Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTII 357 A +LGL+ + RL+++PQA+R I+PPLT+QYLNL KNSSLAVA+G+ DL SV GT + Sbjct: 301 AGASLGLSRGQTLRLIVIPQALRVILPPLTNQYLNLTKNSSLAVAIGYPDLFSVFAGTTL 360 Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMN 386 +QTGQAIE+I I M +YL +S++ + M+ Sbjct: 361 SQTGQAIEVIAITMGVYLLISLVTSALMS 389 >gi|320202179|gb|EFW76754.1| Glutamate Aspartate transport system permease protein GltJ [Escherichia coli EC4100B] Length = 393 Score = 277 bits (708), Expect = 3e-72, Method: Compositional matrix adjust. Identities = 157/369 (42%), Positives = 227/369 (61%), Gaps = 1/369 (0%) Query: 30 QIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAI 89 QI+ + + I W +N N+ ++ G FL AGF I Q ++ Y +Y Sbjct: 25 QILAVVAVVGIVGWLFHNTVTNLSNRGITSGFAFLDRGAGFGIVQHLIDYQQGDTYGRVF 84 Query: 90 LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 +VG +NT ++ ++ A+++G +G RLS N L+ + +Y+E+FRNIPPL+ IFF Y Sbjct: 85 IVGLLNTLLVSALCIVFASVLGFFIGLARLSDNWLLRKLSTIYIEIFRNIPPLLQIFFWY 144 Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209 +VL LP P ++ FL+NRGL P+ + F+ + V+ IVLS+ R ++ Sbjct: 145 FAVLRNLPGPRQAVSAFDLAFLSNRGLYIPSPQLGDGFIAFILAVVMAIVLSVGLFRFNK 204 Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269 + KTG+ I+ LI GL L LH+D P L FNF GG + PE +L Sbjct: 205 TYQIKTGQLRRTWPIAAVLIIGLHLLAQWLFGAALHWDVPALRGFNFRGGMVLIPELAAL 264 Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329 +ALS YT+AFIAEI+R+G+ AVP GQ EAA +LGL + R V++PQA+R IIPPLTS Sbjct: 265 TLALSVYTSAFIAEIIRAGIQAVPYGQHEAARSLGLPNPVTLRQVIIPQALRVIIPPLTS 324 Query: 330 QYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388 QYLN++KNSSLA A+G+ D+VS+ GT++NQTGQAIE I + M +YL +S+ I+L MN Sbjct: 325 QYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAMTMSVYLIISLTISLLMNIY 384 Query: 389 NAKIALKEK 397 N +IA+ E+ Sbjct: 385 NRRIAIVER 393 >gi|331674784|ref|ZP_08375543.1| putative amino-acid ABC transporter permease protein YhdX [Escherichia coli TA280] gi|331068223|gb|EGI39619.1| putative amino-acid ABC transporter permease protein YhdX [Escherichia coli TA280] Length = 399 Score = 276 bits (707), Expect = 3e-72, Method: Compositional matrix adjust. Identities = 152/356 (42%), Positives = 221/356 (62%), Gaps = 1/356 (0%) Query: 43 WCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFS 102 W +N N+ ++ G FL AGF I Q ++ Y +Y +VG +NT ++ Sbjct: 44 WLFHNTVTNLSNRGITSGFAFLDRGAGFGIVQHLIDYQQGDTYGRVFIVGLLNTLLVSAL 103 Query: 103 GMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHS 162 ++ A+++G +G RLS N L+ + +Y+E+FRNIPPL+ IFF Y +VL LP P + Sbjct: 104 CIVFASVLGFFIGLARLSDNWLLRKLSTIYIEIFRNIPPLLQIFFWYFAVLRNLPGPRQA 163 Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222 + FL+NRGL P+ + F+ + V+ I +S+ R ++ + KTG+ Sbjct: 164 VSAFDLAFLSNRGLYIPSPQLGDGFIAFIVTVVIAIAISVGLFRFNKTYQIKTGQLRRTW 223 Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282 ++ LI GLP L LH+D P L FNF GG + PE +L +ALS YT+AFIA Sbjct: 224 PVAVMLIIGLPLLAQWLFGAALHWDVPALRGFNFRGGMVLIPELAALTLALSVYTSAFIA 283 Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342 EI+R+G+ AVP GQ EAA +LGL + R V++PQA+R IIPPLTSQYLN++KNSSLA Sbjct: 284 EIIRAGIQAVPYGQHEAARSLGLPNPVTLRQVIIPQALRVIIPPLTSQYLNIVKNSSLAA 343 Query: 343 AVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 A+G+ D+VS+ GT++NQTGQAIE I + M +YL +S+ I+L MN N +IA+ E+ Sbjct: 344 AIGYPDMVSLFAGTVLNQTGQAIETIAMTMSVYLIISLTISLLMNIYNRRIAIVER 399 >gi|323979011|gb|EGB74089.1| inner membrane transport system [Escherichia coli TW10509] Length = 393 Score = 276 bits (707), Expect = 3e-72, Method: Compositional matrix adjust. Identities = 154/369 (41%), Positives = 227/369 (61%), Gaps = 1/369 (0%) Query: 30 QIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAI 89 QI+ + + I W +N N+ ++ G FL AGF I Q ++ Y +Y Sbjct: 25 QILAVVAVVGIVGWLFHNTVTNLSNRGITSGFAFLDRGAGFGIVQHLIDYQQGDTYGRVF 84 Query: 90 LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 +VG +NT ++ ++ A+++G +G RLS N L+ + +Y+E+FRNIPPL+ IFF Y Sbjct: 85 IVGLLNTLLVSALCIVFASVLGFFIGLARLSDNWLLRKLSTIYIEIFRNIPPLLQIFFWY 144 Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209 +VL LP P ++ FL+NRGL P+ + F+ + V+ I +S+ R ++ Sbjct: 145 FAVLRNLPGPRQAVSAFDLAFLSNRGLYIPSPQLGDGFIAFILTVVIAIAISVGIFRFNK 204 Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269 + KTG+ ++ LI GLP L LH+D P L FNF GG + PE +L Sbjct: 205 TYQIKTGQLRRTWPVAVVLIIGLPLLAQWLFGAALHWDVPALRGFNFRGGMVLIPELAAL 264 Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329 +ALS YT+AFIAEI+R+G+ AVP GQ EAA +LGL + R +++PQA+R IIPPLTS Sbjct: 265 TLALSVYTSAFIAEIIRAGIQAVPYGQHEAARSLGLPNPVTLRQIIIPQALRVIIPPLTS 324 Query: 330 QYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388 QYLN++KNSSLA A+G+ D+VS+ GT++NQTGQAIE I + M +YL +S+ I+L MN Sbjct: 325 QYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAMTMSVYLIISLTISLLMNIY 384 Query: 389 NAKIALKEK 397 N +IA+ E+ Sbjct: 385 NRRIAIVER 393 >gi|301022228|ref|ZP_07186143.1| ABC transporter, permease protein [Escherichia coli MS 69-1] gi|300397641|gb|EFJ81179.1| ABC transporter, permease protein [Escherichia coli MS 69-1] Length = 399 Score = 276 bits (707), Expect = 3e-72, Method: Compositional matrix adjust. Identities = 155/369 (42%), Positives = 227/369 (61%), Gaps = 1/369 (0%) Query: 30 QIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAI 89 QI+ + + I W +N N+ ++ G FL AGF I Q ++ Y +Y Sbjct: 31 QILAVVAVVGIVGWLFHNTVTNLSNRGITSGFAFLDRGAGFGIVQHLIDYQQGDTYRRVF 90 Query: 90 LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 +VG +NT ++ ++ A+++G +G RLS N L+ + +Y+E+FRNIPPL+ IFF Y Sbjct: 91 IVGLLNTLLVSALCIVFASVLGFFIGLARLSDNWLLRKLSTIYIEIFRNIPPLLQIFFWY 150 Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209 +VL LP P ++ FL+NRGL P+ + F+ + V+ I +S+ R ++ Sbjct: 151 FAVLRNLPGPRQAVSAFDLAFLSNRGLYIPSPQLGDGFIAFIVTVVIAIAISVGLFRFNK 210 Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269 + KTG+ ++ LI GLP L LH+D P L FNF GG + PE +L Sbjct: 211 TYQIKTGQLRRTWPVAVMLIIGLPLLAQWLFGAALHWDVPALRGFNFRGGMVLIPELAAL 270 Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329 +ALS YT+AFIAEI+R+G+ AVP GQ EAA +LGL + R V++PQA+R IIPPLTS Sbjct: 271 TLALSVYTSAFIAEIIRAGIQAVPYGQHEAARSLGLPNPVTLRQVIIPQALRVIIPPLTS 330 Query: 330 QYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388 QYLN++KNSSLA A+G+ D+VS+ GT++NQTGQAIE I + M +YL +S+ I+L MN Sbjct: 331 QYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAMTMSVYLIISLTISLLMNIY 390 Query: 389 NAKIALKEK 397 N +IA+ E+ Sbjct: 391 NRRIAIVER 399 >gi|324115127|gb|EGC09091.1| inner membrane transport system [Escherichia fergusonii B253] Length = 393 Score = 276 bits (707), Expect = 3e-72, Method: Compositional matrix adjust. Identities = 154/369 (41%), Positives = 227/369 (61%), Gaps = 1/369 (0%) Query: 30 QIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAI 89 QI+ + + I W +N N+ ++ G FL AGF I Q ++ Y +Y Sbjct: 25 QILAVVAVVGIVGWLFHNTVTNLSNRGITSGFAFLDRGAGFGIVQHLIDYQQGDTYGRVF 84 Query: 90 LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 +VG +NT ++ ++ A+++G +G RLS N L+ + +Y+E+FRNIPPL+ IFF Y Sbjct: 85 IVGLLNTLLVSALCIVFASVLGFFIGLARLSDNWLLRKLSTIYIEIFRNIPPLLQIFFWY 144 Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209 +VL LP P ++ FL+NRGL P+ + F+ + V+ I +S+ R ++ Sbjct: 145 FAVLRNLPGPRQAVSAFDLAFLSNRGLYIPSPQLGDGFIAFILTVVIAIAISVGIFRFNK 204 Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269 + KTG+ ++ LI GLP L LH+D P L FNF GG + PE +L Sbjct: 205 TYQIKTGQLRRTWPVAVVLIIGLPLLAQWLFGAALHWDVPALRGFNFRGGMVLIPELAAL 264 Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329 +ALS YT+AFIAEI+R+G+ AVP GQ EAA +LGL + R +++PQA+R IIPPLTS Sbjct: 265 TLALSVYTSAFIAEIIRAGIQAVPYGQHEAARSLGLPNPVTLRQIIIPQALRVIIPPLTS 324 Query: 330 QYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388 QYLN++KNSSLA A+G+ D+VS+ GT++NQTGQAIE I + M +YL +S+ I+L MN Sbjct: 325 QYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAMTMSVYLIISLTISLLMNIY 384 Query: 389 NAKIALKEK 397 N +IA+ E+ Sbjct: 385 NRRIAIIER 393 >gi|325498847|gb|EGC96706.1| amino-acid transporter subunit ; membrane component of ABC superfamily [Escherichia fergusonii ECD227] Length = 393 Score = 276 bits (707), Expect = 3e-72, Method: Compositional matrix adjust. Identities = 156/369 (42%), Positives = 225/369 (60%), Gaps = 1/369 (0%) Query: 30 QIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAI 89 QI+ + + I W +N N+ ++ G FL AGF I Q ++ Y +Y Sbjct: 25 QILAVVAVVGIIGWLFHNTVTNLSNRGITSGFAFLDRGAGFGIIQHLIDYQQGDTYGRVF 84 Query: 90 LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 +VG +NT ++ ++ A+++G +G RLS N L+ + +Y+E+FRNIPPL+ IFF Y Sbjct: 85 IVGLLNTLLVSALCIVFASVLGFFIGLARLSDNWLLRKLSTIYIEIFRNIPPLLQIFFWY 144 Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209 +VL LP P ++ FL+NRGL P+ + F+ + V+ I LS+ R ++ Sbjct: 145 FAVLRNLPGPRQAVSAFDLAFLSNRGLYIPSPQLGDGFLAFILAVVMAIALSVGLYRFNK 204 Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269 KTG+ + LI GLP L LH+D P L FNF GG + PE +L Sbjct: 205 KHQIKTGQLRRTWPFAVGLIIGLPLLAQWLFGAALHWDVPALQGFNFRGGMVLIPELAAL 264 Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329 +ALS YT+AFIAEI+R+G+ AVP GQ EAA +LGL + R V++PQA+R IIPPLTS Sbjct: 265 TMALSVYTSAFIAEIIRAGIQAVPYGQHEAARSLGLPNPVTLRQVIIPQALRVIIPPLTS 324 Query: 330 QYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388 QYLN++KNSSLA A+G+ D+VS+ GT++NQTGQAIE I + M +YL +S+ I+L MN Sbjct: 325 QYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAMTMSVYLIISLTISLLMNIY 384 Query: 389 NAKIALKEK 397 N +IA+ E+ Sbjct: 385 NRRIAIVER 393 >gi|218550553|ref|YP_002384344.1| amino-acid ABC transporter membrane protein [Escherichia fergusonii ATCC 35469] gi|218358094|emb|CAQ90740.1| amino-acid transporter subunit ; membrane component of ABC superfamily [Escherichia fergusonii ATCC 35469] Length = 393 Score = 276 bits (706), Expect = 4e-72, Method: Compositional matrix adjust. Identities = 156/369 (42%), Positives = 225/369 (60%), Gaps = 1/369 (0%) Query: 30 QIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAI 89 QI+ + + I W +N N+ ++ G FL AGF I Q ++ Y +Y Sbjct: 25 QILAVVAVVGIIGWLFHNTVTNLSNRGITSGFAFLDRGAGFGIIQHLIDYQQGDTYGRVF 84 Query: 90 LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 +VG +NT ++ ++ A+++G +G RLS N L+ + +Y+E+FRNIPPL+ IFF Y Sbjct: 85 IVGLLNTLLVSALCIVFASVLGFFIGLARLSDNWLLRKLSTIYIEIFRNIPPLLQIFFWY 144 Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209 +VL LP P ++ FL+NRGL P+ + F+ + V+ I LS+ R ++ Sbjct: 145 FAVLRNLPGPRQAVSAFDLAFLSNRGLYIPSPQLGDGFLAFILAVVMAIALSVGLYRFNK 204 Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269 KTG+ + LI GLP L LH+D P L FNF GG + PE +L Sbjct: 205 KHQIKTGQLRRTWPFAVGLIIGLPLLAQWLFGAALHWDVPALQGFNFRGGMVLIPELAAL 264 Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329 +ALS YT+AFIAEI+R+G+ AVP GQ EAA +LGL + R V++PQA+R IIPPLTS Sbjct: 265 TMALSVYTSAFIAEIIRAGIQAVPYGQHEAARSLGLPNPVTLRQVIIPQALRVIIPPLTS 324 Query: 330 QYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388 QYLN++KNSSLA A+G+ D+VS+ GT++NQTGQAIE I + M +YL +S+ I+L MN Sbjct: 325 QYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAMTMSVYLIISLTISLLMNIY 384 Query: 389 NAKIALKEK 397 N +IA+ E+ Sbjct: 385 NRRIAIVER 393 >gi|304396996|ref|ZP_07378876.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea sp. aB] gi|304355792|gb|EFM20159.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea sp. aB] Length = 392 Score = 276 bits (706), Expect = 4e-72, Method: Compositional matrix adjust. Identities = 163/395 (41%), Positives = 237/395 (60%), Gaps = 5/395 (1%) Query: 4 NARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGF 63 + R TV R FS + V Q+I + + + + V+N N++ ++ G GF Sbjct: 2 SQRPTVKRDFS----FGNPTVRAWIYQLIAVVAVLGVVGYLVHNTIINLDNRGITSGFGF 57 Query: 64 LSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK 123 L AGF I Q ++ YT +YA LVG NT ++ ++ A+I+G VG RLS N Sbjct: 58 LERTAGFGIVQHLIEYTEGDTYARVFLVGLTNTLLVSALCIVFASILGFAVGLARLSDNW 117 Query: 124 LVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTM 183 L+ + +Y+E FRNIPPL+ IFF Y +VL LP P ++ +++NRGL P T Sbjct: 118 LLRKLSNIYIETFRNIPPLLQIFFWYFAVLRNLPGPRQALNAFDLAYVSNRGLYVPWPTY 177 Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243 + FV + +L + +S R +R KTG+ + ++ P L + Sbjct: 178 APGSWPFVIALLLAVAVSYALYRFNRQHQLKTGELRRTWPAAVGMLILFPLLAHLGFGAA 237 Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 +H+D P L FNF GGS + PE +L +ALS YT++FIAE++RSG+ +VP GQ EAA +L Sbjct: 238 MHWDVPQLRGFNFRGGSVMIPELAALTLALSIYTSSFIAEVIRSGIQSVPHGQHEAARSL 297 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQ 362 GL + R V++PQAMR IIPPLTSQYLN++KNSSLA A+G+ D+VS+ G+++NQTGQ Sbjct: 298 GLPNPVTLRQVIIPQAMRVIIPPLTSQYLNIVKNSSLAAAIGYPDMVSLFAGSVLNQTGQ 357 Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 AIE I I M +YL +S++I++ MN N KIAL E+ Sbjct: 358 AIETIAITMGVYLIISLLISMLMNFYNRKIALVER 392 >gi|291619132|ref|YP_003521874.1| YhdX [Pantoea ananatis LMG 20103] gi|291154162|gb|ADD78746.1| YhdX [Pantoea ananatis LMG 20103] Length = 392 Score = 276 bits (706), Expect = 4e-72, Method: Compositional matrix adjust. Identities = 155/356 (43%), Positives = 221/356 (62%), Gaps = 1/356 (0%) Query: 43 WCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFS 102 + ++N N+ ++ G GFL AGF I Q ++ YT +YA LVG NT ++ Sbjct: 37 YLIHNTVINLANRGITSGFGFLERNAGFGIVQHLIDYTEGDTYARVFLVGLTNTLLVSAL 96 Query: 103 GMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHS 162 ++ A+++G +G RLS N L+ I +Y+E FRNIPPL+ IFF Y +VL LP P + Sbjct: 97 CIVFASVLGFFIGLARLSDNWLLRKIANIYIETFRNIPPLLQIFFWYFAVLRNLPGPRQA 156 Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222 + F++NRGL P T + FV + VL +V S R +R KTG+ Sbjct: 157 LNAFDLAFVSNRGLYVPWPTYAPGSWPFVIALVLAVVASYALFRFNRQHQLKTGQFRRTW 216 Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282 ++ ++ P + + +H+D P L FNF GG + PE +L +ALS YT++FIA Sbjct: 217 PVAILMLLLFPFIAHLGFGAAMHWDIPELRGFNFRGGFVMIPELAALTLALSIYTSSFIA 276 Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342 E++RSG+ AVP GQ EAA +LGL + R V++PQAMR IIPPLTSQYLN++KNSSLA Sbjct: 277 EVIRSGIQAVPYGQHEAARSLGLPNPVTLRQVIIPQAMRVIIPPLTSQYLNIVKNSSLAA 336 Query: 343 AVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 A+G+ D+VS+ GT++NQTGQAIE I I M +YL +S++I++ MN N KIAL E+ Sbjct: 337 AIGYPDMVSLFAGTVLNQTGQAIETIAITMSVYLIISLLISMLMNFYNRKIALVER 392 >gi|312959111|ref|ZP_07773630.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Pseudomonas fluorescens WH6] gi|311286881|gb|EFQ65443.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Pseudomonas fluorescens WH6] Length = 393 Score = 276 bits (705), Expect = 5e-72, Method: Compositional matrix adjust. Identities = 163/378 (43%), Positives = 228/378 (60%), Gaps = 1/378 (0%) Query: 21 DMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYT 80 D +V QII + + + + NN N++ ++ G FL AGF I Q ++ YT Sbjct: 16 DPKVRAWLFQIITIVAVVSLGWYLFNNTQTNLQHRGITSGFDFLERSAGFGIAQHLIDYT 75 Query: 81 SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140 SYA ++G +NT + F G+I AT++G +VG RLS N ++ + VYVEVFRNIP Sbjct: 76 ESDSYARVFVIGLLNTLLVTFIGVILATLLGFIVGVARLSPNWMINKLATVYVEVFRNIP 135 Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200 PL+ I F Y +V +P P +S F+++RGL+ P FV S V+ IV Sbjct: 136 PLLQILFWYFAVFLTMPGPRNSHNFGDTFFVSSRGLNMPAAMAADGFWPFVASIVVAIVA 195 Query: 201 SLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGS 260 + TR + E TG + L +P L + LH++ P L FNF+GG Sbjct: 196 IVLMTRWANKRFEATGVPFHKFWAGLALFIVIPALCALIFGVPLHWEMPKLQGFNFVGGW 255 Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320 + PE ++L +AL+ YTAAFIAEIVRSG+ +V GQ EAA +LGL + R V++PQA+ Sbjct: 256 VLIPELLALTLALTVYTAAFIAEIVRSGIKSVSHGQTEAARSLGLRNGPTLRKVIIPQAL 315 Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSI 379 R IIPPLTSQYLNL KNSSLA +G+ ++VS+ GT++NQTGQAIE+I I M +YL++SI Sbjct: 316 RVIIPPLTSQYLNLAKNSSLAAGIGYPEMVSLFAGTVLNQTGQAIEVIAITMSVYLAISI 375 Query: 380 MIALFMNRLNAKIALKEK 397 I+L MN N +IAL E+ Sbjct: 376 SISLLMNWYNKRIALIER 393 >gi|330969253|gb|EGH69319.1| polar amino acid ABC transporter, inner membrane subunit [Pseudomonas syringae pv. aceris str. M302273PT] Length = 393 Score = 276 bits (705), Expect = 6e-72, Method: Compositional matrix adjust. Identities = 155/380 (40%), Positives = 231/380 (60%), Gaps = 1/380 (0%) Query: 19 LYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVP 78 L D +V QII + + + + +N N++ ++ G GFL AGF I Q ++ Sbjct: 14 LSDPKVRAWLFQIITVVAVIALGWFIFDNTQTNLQHRGITSGFGFLENSAGFGIAQHLID 73 Query: 79 YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138 Y+ SYA ++G +NT ++ G++ AT++G ++G RLS N +++ + VYVEVFRN Sbjct: 74 YSEADSYARVFVIGLLNTLLVSVIGIVLATLLGFVIGVARLSPNWMISKLATVYVEVFRN 133 Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198 IPPL+ I F Y +V LP P + F+++RGL+ P F+ S V+ + Sbjct: 134 IPPLLQILFWYTAVFLTLPGPRQAHGYLDMFFVSSRGLNMPRALPAEGTWAFLISLVVAV 193 Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258 + + R + TG+ ++ L+ +P L ++ +H++ P L FNF G Sbjct: 194 IAIVMMVRWANKRFGATGQPFHKFWVGLALLLVIPGLSMLIFGSPVHWELPQLKGFNFSG 253 Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G + PE +SL +AL+ YTAAFIAEIVRSG+ +V GQ EAA +LGL R V++PQ Sbjct: 254 GWVLIPELISLTLALTIYTAAFIAEIVRSGIKSVSHGQTEAARSLGLRPGPTLRKVIIPQ 313 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSL 377 A+R IIPPLTSQ+LNL KNSSLA A+G+ ++VS+ GT++NQTGQAIE+I I M +YL++ Sbjct: 314 ALRVIIPPLTSQFLNLAKNSSLAAAIGYPEMVSLFAGTVLNQTGQAIEVIAITMSVYLAI 373 Query: 378 SIMIALFMNRLNAKIALKEK 397 SI I+L MN N +IAL E+ Sbjct: 374 SISISLLMNWYNKRIALIER 393 >gi|293605349|ref|ZP_06687734.1| general amino acid ABC superfamily ATP binding cassette transporter, permease protein [Achromobacter piechaudii ATCC 43553] gi|292816288|gb|EFF75384.1| general amino acid ABC superfamily ATP binding cassette transporter, permease protein [Achromobacter piechaudii ATCC 43553] Length = 380 Score = 275 bits (704), Expect = 7e-72, Method: Compositional matrix adjust. Identities = 169/367 (46%), Positives = 228/367 (62%), Gaps = 2/367 (0%) Query: 32 ILALLLTVIFLW-CVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAIL 90 +LAL L W V+N +N+ N++ G GFL+ AGF I + ++ Y +Y AI Sbjct: 15 VLALTLVGASTWFLVHNTLHNLSMRNIATGFGFLNREAGFAIGESVIAYGPADTYGRAIF 74 Query: 91 VGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYK 150 VG +NT + ++ AT++G L+G GRLS N LV I VYVEV RN+P L+ +FF Y Sbjct: 75 VGVLNTLRVGLLALVAATLLGVLIGIGRLSKNWLVKKITSVYVEVMRNVPLLLQLFFWYA 134 Query: 151 SVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRH 210 + +P P + G+F++NRGL P L + + L IV L Sbjct: 135 LITENMPGPRQAHNPLPGVFISNRGLKVPGLE-GASLDWMLGGLALAIVAILLLGHWGAK 193 Query: 211 FHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY 270 E TG+ PL + L+ LP L +A L D P L FNF+GG T++PEF++L+ Sbjct: 194 RQEATGRVFPLGRWAIGLLLALPALGWLASGASLTLDMPQLRGFNFVGGLTLTPEFVALF 253 Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + L+ YT+AFIAE+VRSG+ AV GQ EAA +LGL K RLV+LPQA+R IIPP+TSQ Sbjct: 254 LGLTVYTSAFIAEVVRSGIQAVNNGQWEAAGSLGLPRAKVLRLVVLPQALRVIIPPMTSQ 313 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 YLNLLKNSSLAVA+G+ D+VSV T +NQTGQAIE ILI M YL++S+ I++FMN N Sbjct: 314 YLNLLKNSSLAVAIGYPDIVSVVNTTLNQTGQAIEGILIIMGAYLTVSLSISIFMNWYNK 373 Query: 391 KIALKEK 397 +IAL E+ Sbjct: 374 RIALVER 380 >gi|319957435|ref|YP_004168698.1| amino acid ABC transporter membrane protein 1, paat family [Nitratifractor salsuginis DSM 16511] gi|319419839|gb|ADV46949.1| amino acid ABC transporter membrane protein 1, PAAT family [Nitratifractor salsuginis DSM 16511] Length = 384 Score = 275 bits (704), Expect = 7e-72, Method: Compositional matrix adjust. Identities = 158/391 (40%), Positives = 231/391 (59%), Gaps = 21/391 (5%) Query: 18 FLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIV 77 FL D ++ I QII L + N +N+E+ + G FL + AGF+I + + Sbjct: 4 FLRDEKIRGILYQIIAITLFVGFLFYIAQNTAHNIEQRGIKTGFAFLHDTAGFDITESPI 63 Query: 78 PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137 P+T S++ VG +NT ++F G++ +++IG L+G RLS N L+ I Y+E FR Sbjct: 64 PFTPASTHLKVFEVGLLNTLIVSFWGIVFSSLIGLLIGIWRLSPNWLINRIAAAYIETFR 123 Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLG 197 NIP L+ I F Y VL+ LP HS+ +F+NNRG P L A + + V Sbjct: 124 NIPVLLQILFWYNVVLATLPSTRHSLNFFNAVFINNRGFFMPKLVFQDGAWMIGAAIVAA 183 Query: 198 IVLSLFATRLSRHFHEKTGKALPLL----------YISTFLIFGLPTLVLIALKYQLHFD 247 I+ +F R ++ E+TG+ P+ + +LI G P + Sbjct: 184 IIGIIFVHRWAKKRQEETGEQFPVFLTGIILLIGLPLLAYLIAGRPVTAVY--------- 234 Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307 P L FNF GG T +PEF++L ALS YTA FIAE +RSG+ AVP+GQ EAA +LGL+ Sbjct: 235 -PELHGFNFRGGKTFTPEFLALLFALSIYTATFIAEAIRSGIEAVPKGQKEAATSLGLSP 293 Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEI 366 + RLV+LPQA+R IP + +QYLNL+KNSSLA A+G+ +LV++ GT +NQTGQA+EI Sbjct: 294 LQQLRLVILPQAVRIAIPSIINQYLNLIKNSSLAAAIGYPELVTIFAGTSLNQTGQALEI 353 Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 +LI M YL +S++++L +N NAK+ +KE+ Sbjct: 354 LLITMLTYLLISLIVSLILNWFNAKMKIKER 384 >gi|331015251|gb|EGH95307.1| polar amino acid ABC transporter, inner membrane subunit [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 393 Score = 275 bits (704), Expect = 8e-72, Method: Compositional matrix adjust. Identities = 156/381 (40%), Positives = 236/381 (61%), Gaps = 3/381 (0%) Query: 19 LYDMRVHNISVQIILALLLTVIFLWCV-NNVYNNMEKSNLSLGIGFLSERAGFEIDQGIV 77 L D +V QII +++ + F W + +N N++ ++ G GFL AGF I Q ++ Sbjct: 14 LSDPKVRAWLFQII-TVVVVIAFGWFIFDNTQTNLQHRGITSGFGFLENSAGFGIAQHLI 72 Query: 78 PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137 Y+ +YA ++G +NT ++ G++ AT++G ++G RLS N +++ + VYVEVFR Sbjct: 73 DYSESDTYARVFVIGLLNTLLVSVIGIVLATLLGFVIGVARLSPNWMISKLATVYVEVFR 132 Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLG 197 NIPPL+ I F Y +V LP P + ++++RGL+ P A F+ S V+ Sbjct: 133 NIPPLLQILFWYTAVFLTLPGPRQAHGYLDMFYVSSRGLNMPGALPAEGAWAFLISIVVA 192 Query: 198 IVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFI 257 ++ + R + E TG+ ++ L+ +P L ++ +H++ P L FNF Sbjct: 193 VIAVVMMVRWANKRFEATGQPFHKFWVGLALLLAIPGLSMLIFGSPVHWELPQLKGFNFT 252 Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317 GG + PE +SL +AL+ YTAAFIAEIVRSG+ +V GQ EAA +LGL R V++P Sbjct: 253 GGWVLIPELISLTLALTIYTAAFIAEIVRSGIKSVSHGQTEAARSLGLRPGPTLRKVIIP 312 Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLS 376 QA+R IIPPLTSQ+LNL KNSSLA A+G+ ++VS+ GT++NQTGQAIE+I I M +YL+ Sbjct: 313 QALRVIIPPLTSQFLNLAKNSSLAAAIGYPEMVSLFAGTVLNQTGQAIEVIAITMSVYLA 372 Query: 377 LSIMIALFMNRLNAKIALKEK 397 +SI I++ MN N +IAL E+ Sbjct: 373 ISISISMLMNWYNKRIALIER 393 >gi|86750028|ref|YP_486524.1| polar amino acid ABC transporter, inner membrane subunit [Rhodopseudomonas palustris HaA2] gi|86573056|gb|ABD07613.1| polar amino acid ABC transporter, inner membrane subunit [Rhodopseudomonas palustris HaA2] Length = 401 Score = 275 bits (704), Expect = 8e-72, Method: Compositional matrix adjust. Identities = 157/395 (39%), Positives = 239/395 (60%), Gaps = 3/395 (0%) Query: 1 MIKNARKTVTRYFSRMKFLYDMRV--HNISVQIILALLLTVIFLWCVNNVYNNMEKSNLS 58 M +AR +++ +R++ R + Q++ +L I V+N +N+ ++ Sbjct: 1 MAIDARPPPSQFGARLRRALGGRSGWKGLIAQLLFVAVLCWIGYAIVDNARDNLTNQRIA 60 Query: 59 LGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGR 118 G GF+S+ AGF + Q ++PY SY LVG VNT ++ G+ AT++G LV GR Sbjct: 61 SGFGFMSQTAGFGVSQTLIPYAESDSYTRVFLVGLVNTLVVSVIGIFFATLLGFLVALGR 120 Query: 119 LSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSF 178 LS N L+A I YVE+ RN+P L I F Y +VL LP P S+ + FL+NRG+ Sbjct: 121 LSPNWLIARIAGGYVELIRNLPLLFQILFWYLAVLGALPGPRQSVSVFDSFFLSNRGIVV 180 Query: 179 PTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLI 238 P + F+ + ++ ++ ++ +R TGK + + S L+ GLP + ++ Sbjct: 181 PRPVGEAGLDGFLVALLIAVIAAIVLPIYARRRLFDTGKPMKVWPWSVGLLIGLPLIAVL 240 Query: 239 ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQME 298 F+ P L FNF GG+ ++PEF++L +AL+ YTA FIAEIVR+G+++V +GQME Sbjct: 241 IFGRPFGFEIPALKGFNFAGGARIAPEFVALTLALATYTAGFIAEIVRAGILSVHKGQME 300 Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTII 357 A +LGL+ RLV++PQAMR I+PPLT+QYLNL KNSSLAVA+G+ DL SV GT + Sbjct: 301 AGASLGLSRGATLRLVVIPQAMRVILPPLTNQYLNLTKNSSLAVAIGYPDLFSVFAGTTL 360 Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 +QTGQAIE+I I M +YL +S++ + M+ + +I Sbjct: 361 SQTGQAIEVIAITMGVYLLISLITSALMSLYSWRI 395 >gi|306816387|ref|ZP_07450519.1| putative amino-acid transporter subunit [Escherichia coli NC101] gi|222034985|emb|CAP77728.1| amino-acid ABC transporter permease protein [Escherichia coli LF82] gi|305849952|gb|EFM50411.1| putative amino-acid transporter subunit [Escherichia coli NC101] gi|312947827|gb|ADR28654.1| predicted amino-acid transporter subunit [Escherichia coli O83:H1 str. NRG 857C] Length = 393 Score = 275 bits (703), Expect = 9e-72, Method: Compositional matrix adjust. Identities = 156/369 (42%), Positives = 226/369 (61%), Gaps = 1/369 (0%) Query: 30 QIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAI 89 QI+ + + I W +N N+ ++ G FL AGF I Q ++ Y +Y Sbjct: 25 QILAVVAVVGIIGWLFHNTVTNLSNRGITSGFAFLDRGAGFGIVQHLIDYQQGDTYGRVF 84 Query: 90 LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 +VG +NT ++ ++ A+++G +G RLS N L+ + +Y+E+FRNIPPL+ IFF Y Sbjct: 85 IVGLLNTLLVSALCIVFASVLGFFIGLARLSDNWLLRKLSTIYIEIFRNIPPLLQIFFWY 144 Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209 +VL LP P ++ FL+NRGL P+ + F+ + V+ IVLS+ R ++ Sbjct: 145 FAVLRNLPGPRQAVSAFDLAFLSNRGLYIPSPQLGDGFIAFILAVVMAIVLSVGLFRFNK 204 Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269 + KTG+ + LI GLP L L +D P L FNF GG + PE +L Sbjct: 205 TYQIKTGQLRRTWPFAAVLIIGLPLLAQWLFGAALLWDVPALRGFNFRGGMVLIPELAAL 264 Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329 +ALS YT+AFIAEI+R+G+ AVP GQ EAA +LGL + R V++PQA+R IIPPLTS Sbjct: 265 TLALSVYTSAFIAEIIRAGIQAVPYGQHEAARSLGLPNPVTLRQVIIPQALRVIIPPLTS 324 Query: 330 QYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388 QYLN++KNSSLA A+G+ D+VS+ GT++NQTGQAIE I + M +YL +S+ I+L MN Sbjct: 325 QYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAMTMSVYLIISLTISLLMNIY 384 Query: 389 NAKIALKEK 397 N +IA+ E+ Sbjct: 385 NRRIAIVER 393 >gi|75675720|ref|YP_318141.1| amino acid ABC transporter, inner membrane component [Nitrobacter winogradskyi Nb-255] gi|74420590|gb|ABA04789.1| amino acid ABC transporter membrane protein 1, PAAT family [Nitrobacter winogradskyi Nb-255] Length = 401 Score = 275 bits (702), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 164/396 (41%), Positives = 241/396 (60%), Gaps = 3/396 (0%) Query: 1 MIKNARKTVTRYFSRMKFLYDMRV--HNISVQIILALLLTVIFLWCVNNVYNNMEKSNLS 58 M +RK ++ R++ R +++Q++ +L I V N N+E N + Sbjct: 1 MATRSRKPPLQFSLRLRRALGGRAGWSGLALQVLFVAILAWIGYEIVANARGNLEAQNTA 60 Query: 59 LGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGR 118 G+GF+S AGF + Q ++PY+ SY LVG VNT +A G+ AT+IG +V GR Sbjct: 61 SGLGFMSNTAGFGVSQTLIPYSQTDSYTRVFLVGLVNTLVVAAVGIFFATVIGFMVALGR 120 Query: 119 LSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSF 178 LS N L++ I YVE+ RN+P L I F Y +VL +LP P SI + G+FL+NRGL+ Sbjct: 121 LSPNWLISRISGGYVELVRNLPLLFQILFWYLAVLRMLPSPKQSISILDGVFLSNRGLAI 180 Query: 179 PTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLI 238 P F + + I+ + SR +TG+AL + + L+ LP + + Sbjct: 181 PRPVGQEGLIAFAVAIAVAIIGCMVLRSHSRRSLFRTGRALVVWPYALGLLIFLPAVAIA 240 Query: 239 ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQME 298 F+ PVL FNF GG+ + PEF++L IALS YTAAFIAE+VR+G+++V +GQME Sbjct: 241 VFGIPFTFEMPVLKGFNFSGGARLIPEFVALAIALSTYTAAFIAEVVRAGILSVHKGQME 300 Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTII 357 A ALGL+ RL+++PQAMR ++PPLT+QYLNL KNSSLAVA+G+ +L SV GT + Sbjct: 301 AGAALGLSRGSTLRLIVVPQAMRVVLPPLTNQYLNLTKNSSLAVAIGYPELFSVFAGTTL 360 Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393 +QTGQAIEI+ I M +YL +S++ + M+ + ++A Sbjct: 361 SQTGQAIEILAITMGVYLLISLVTSGIMSIYSRRVA 396 >gi|213967085|ref|ZP_03395234.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tomato T1] gi|301386369|ref|ZP_07234787.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tomato Max13] gi|302133059|ref|ZP_07259049.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213927927|gb|EEB61473.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tomato T1] Length = 393 Score = 275 bits (702), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 156/381 (40%), Positives = 235/381 (61%), Gaps = 3/381 (0%) Query: 19 LYDMRVHNISVQIILALLLTVIFLWCV-NNVYNNMEKSNLSLGIGFLSERAGFEIDQGIV 77 L D +V QII ++ + F W + +N N++ ++ G GFL AGF I Q ++ Sbjct: 14 LSDPKVRAWLFQII-TVVAVIAFGWFIFDNTQTNLQHRGITSGFGFLENSAGFGIAQHLI 72 Query: 78 PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137 Y+ +YA ++G +NT ++ G++ AT++G ++G RLS N +++ + VYVEVFR Sbjct: 73 DYSESDTYARVFVIGLLNTLLVSVIGIVLATLLGFVIGVARLSPNWMISKLATVYVEVFR 132 Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLG 197 NIPPL+ I F Y +V LP P + ++++RGL+ P A F+ S V+ Sbjct: 133 NIPPLLQILFWYTAVFLTLPGPRQAHGYLDMFYVSSRGLNMPGALPAEGAWAFLISIVVA 192 Query: 198 IVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFI 257 ++ + R + E TG+ ++ L+ +P L ++ +H++ P L FNF Sbjct: 193 VIAVVMMVRWANKRFEATGQPFHKFWVGLALLLAIPGLSMLIFGSPVHWELPQLKGFNFT 252 Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317 GG + PE +SL +AL+ YTAAFIAEIVRSG+ +V GQ EAA +LGL R V++P Sbjct: 253 GGWVLIPELISLTLALTIYTAAFIAEIVRSGIKSVSHGQTEAARSLGLRPGPTLRKVIIP 312 Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLS 376 QA+R IIPPLTSQ+LNL KNSSLA A+G+ ++VS+ GT++NQTGQAIE+I I M +YL+ Sbjct: 313 QALRVIIPPLTSQFLNLAKNSSLAAAIGYPEMVSLFAGTVLNQTGQAIEVIAITMSVYLA 372 Query: 377 LSIMIALFMNRLNAKIALKEK 397 +SI I++ MN N +IAL E+ Sbjct: 373 ISISISMLMNWYNKRIALIER 393 >gi|28868467|ref|NP_791086.1| amino acid ABC transporter permease [Pseudomonas syringae pv. tomato str. DC3000] gi|28851705|gb|AAO54781.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tomato str. DC3000] Length = 393 Score = 274 bits (701), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 156/381 (40%), Positives = 235/381 (61%), Gaps = 3/381 (0%) Query: 19 LYDMRVHNISVQIILALLLTVIFLWCV-NNVYNNMEKSNLSLGIGFLSERAGFEIDQGIV 77 L D +V QII ++ + F W + +N N++ ++ G GFL AGF I Q ++ Sbjct: 14 LSDPKVRAWLFQII-TVVAVIAFGWFIFDNTQTNLQHRGITSGFGFLENSAGFGIAQHLI 72 Query: 78 PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137 Y+ +YA ++G +NT ++ G++ AT++G ++G RLS N +++ + VYVEVFR Sbjct: 73 DYSESDTYARVFVIGLLNTLLVSVIGIVLATLLGFVIGVARLSPNWMISKLATVYVEVFR 132 Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLG 197 NIPPL+ I F Y +V LP P + ++++RGL+ P A F+ S V+ Sbjct: 133 NIPPLLQILFWYTAVFLTLPGPRQAHGYLDMFYVSSRGLNMPGALPAEGAWAFLISIVVA 192 Query: 198 IVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFI 257 ++ + R + E TG+ ++ L+ +P L ++ +H++ P L FNF Sbjct: 193 VIAVVMMVRWANKRFEATGQPFHKFWVGLALLLSIPGLSMLIFGSPVHWELPQLKGFNFT 252 Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317 GG + PE +SL +AL+ YTAAFIAEIVRSG+ +V GQ EAA +LGL R V++P Sbjct: 253 GGWVLIPELISLTLALTIYTAAFIAEIVRSGIKSVSHGQTEAARSLGLRPGPTLRKVIIP 312 Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLS 376 QA+R IIPPLTSQ+LNL KNSSLA A+G+ ++VS+ GT++NQTGQAIE+I I M +YL+ Sbjct: 313 QALRVIIPPLTSQFLNLAKNSSLAAAIGYPEMVSLFAGTVLNQTGQAIEVIAITMSVYLA 372 Query: 377 LSIMIALFMNRLNAKIALKEK 397 +SI I++ MN N +IAL E+ Sbjct: 373 ISISISMLMNWYNKRIALIER 393 >gi|27379558|ref|NP_771087.1| amino acid ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] gi|27352710|dbj|BAC49712.1| amino acid ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] Length = 401 Score = 274 bits (701), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 158/363 (43%), Positives = 231/363 (63%), Gaps = 1/363 (0%) Query: 25 HNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSS 84 + ++VQ A +L I V+N N+E +++ G GFL AGF+++Q ++ YT + Sbjct: 27 NGVAVQFAFAAILGWIGYEIVSNARANLENQHIAAGFGFLRNNAGFDVNQTLISYTGSDT 86 Query: 85 YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144 + +VG +NT ++ G+ AT+IG +V RLS N L++ I +YVE+ RN+P L Sbjct: 87 FLRVFIVGLLNTLVVSVVGIFFATVIGFIVALCRLSPNWLLSRIGELYVEIIRNLPLLFQ 146 Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFA 204 I F Y +VL+ LP P SI L F++NRGL P ++ + F+ VLGIV SL Sbjct: 147 ILFWYLAVLAALPNPRQSISLLGIAFVSNRGLVIPRPIGESGFEPFLAMLVLGIVASLAL 206 Query: 205 TRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP 264 +R + G+ + + L+FGLP + ++ F+ P L FNF GGS + P Sbjct: 207 RFHARRALFQRGQVIRIWPYVLGLLFGLPVVTMLVFGLPFTFELPQLKGFNFAGGSRIIP 266 Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 EF++L +ALS YTAAFIAEIVR+G+++V +GQMEA +LGL+ RL+++PQAMR I+ Sbjct: 267 EFVALTVALSTYTAAFIAEIVRAGILSVHKGQMEAGSSLGLSRGTTLRLIVVPQAMRVIV 326 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 PPLT+QYLNL KNSSLAVA+G+ DLVSV GT ++QTGQAIEII + M +YL +S++ + Sbjct: 327 PPLTNQYLNLTKNSSLAVAIGYPDLVSVFAGTSLSQTGQAIEIIAMTMGVYLLISLVTSA 386 Query: 384 FMN 386 M+ Sbjct: 387 VMS 389 >gi|77462292|ref|YP_351796.1| ABC glutamate/glutamine/aspartate/asparagine transporter, inner membrane subunit BztB [Rhodobacter sphaeroides 2.4.1] gi|126461168|ref|YP_001042282.1| polar amino acid ABC transporter, inner membrane subunit [Rhodobacter sphaeroides ATCC 17029] gi|221638146|ref|YP_002524408.1| Polar amino acid ABC transporter inner membrane subunit [Rhodobacter sphaeroides KD131] gi|77386710|gb|ABA77895.1| ABC glutamate/glutamine/aspartate/asparagine transporter, inner membrane subunit BztB [Rhodobacter sphaeroides 2.4.1] gi|126102832|gb|ABN75510.1| polar amino acid ABC transporter, inner membrane subunit [Rhodobacter sphaeroides ATCC 17029] gi|221158927|gb|ACL99906.1| Polar amino acid ABC transporter, inner membrane subunit [Rhodobacter sphaeroides KD131] Length = 420 Score = 274 bits (700), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 169/405 (41%), Positives = 234/405 (57%), Gaps = 28/405 (6%) Query: 19 LYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVP 78 LYD R ++++Q+ + L W V+N N+E GFL RAG++I Q +V Sbjct: 18 LYDTRYRSLTIQVFVFFLFMAGAAWLVDNTMRNLEALGKDFDFGFLWNRAGYDISQRLVD 77 Query: 79 YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138 YT+DS++ A+LVG +NT +A G + AT+IG LVG RLS N +V + VYVEVFRN Sbjct: 78 YTNDSTHGRAMLVGLLNTLLIALLGCMAATVIGVLVGVLRLSRNWIVGRLMTVYVEVFRN 137 Query: 139 IPPLVVIFFLYKSVLSVLPIPD------HSIVLPFGMFLN-----NRGLSFPTLTMDTN- 186 +P L+ I +Y P P+ + + MFL+ NR + P Sbjct: 138 VPLLLWILLIYAVFSEATPAPNAFRPNPETGIADRSMFLDAIAVTNRYTALPNPVFSREL 197 Query: 187 ---------AKIFVFSFVLGIVLSLFATR----LSRHFHEKTGKALPLLYISTFLIFGLP 233 + V + + I+ F R + E TG+ + S L+ GLP Sbjct: 198 GWLDLGLFYVNMDVLAVIGAIIAGWFINRSVKARATRIQEATGERPATWWSSLLLLVGLP 257 Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293 VL+AL + L F P L FNF+GG VS FM+L++ALS YT AFIAEIVR G++AV Sbjct: 258 VAVLLALGFHLEF--PELRGFNFVGGLNVSNSFMALWLALSLYTGAFIAEIVRGGILAVS 315 Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV-SV 352 RGQ EAA ALGL + LV+LPQA+R IIPPL SQYLNL KNSSLA+AVG+ DL ++ Sbjct: 316 RGQSEAAFALGLRPGRTMNLVILPQALRVIIPPLISQYLNLTKNSSLAIAVGYLDLRGTL 375 Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 GG +NQTG+ +E +L+ M IYL++S++I+ MN N+ + LKE+ Sbjct: 376 GGITLNQTGRELECVLLMMLIYLAISLVISGVMNVYNSAVKLKER 420 >gi|170743937|ref|YP_001772592.1| polar amino acid ABC transporter inner membrane subunit [Methylobacterium sp. 4-46] gi|168198211|gb|ACA20158.1| polar amino acid ABC transporter, inner membrane subunit [Methylobacterium sp. 4-46] Length = 400 Score = 274 bits (700), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 167/389 (42%), Positives = 241/389 (61%), Gaps = 6/389 (1%) Query: 15 RMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQ 74 R+ L D +V + QI+L L + ++ ++N N+ + ++ G GFL AGF++ Q Sbjct: 12 RVSPLNDPKVRGAAYQILLLLGIGLVAWMAISNAAENLRNARIASGFGFLGNTAGFDVSQ 71 Query: 75 GIVPYTS-DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYV 133 +VP+ + S+Y A +VG +NT +A G+ AT++G L+G RLS N ++A + VYV Sbjct: 72 ALVPFAAATSTYGAAFVVGLLNTLLVAVIGIAVATVLGFLIGVARLSPNWMLAKLATVYV 131 Query: 134 EVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFS 193 EV RNIP L+ + F Y +VL+ LP S+ P +FLN RGL P + +A + Sbjct: 132 EVVRNIPLLLQLLFWYVAVLAALPGARDSLAFPGSVFLNQRGLYVPKPILAADAWAIPAA 191 Query: 194 FVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY----QLHFDKP 249 F +G+ +L +R +TG+ P+ + L+ GLP L L + + P Sbjct: 192 FGIGVAAALAYRFRARREQARTGRQAPVGLVGLALVLGLPLLAWAGLALAGLSPVTVELP 251 Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309 V G FN GG + PEF++L + LS YTAAFIAE+VRSG+ AV +GQ EAA ALGL Sbjct: 252 VKGTFNLRGGLQLFPEFVALVLGLSIYTAAFIAEVVRSGIQAVAKGQTEAARALGLRPGP 311 Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIIL 368 RLV++PQAMR I+PPLTSQYLNL KNSSLAVA+G+ DLV V GT++NQTGQA+E++ Sbjct: 312 TLRLVVIPQAMRVIVPPLTSQYLNLTKNSSLAVAIGYPDLVQVFMGTVLNQTGQAVEVVA 371 Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKEK 397 I M +YL++S++ A MN N ++AL E+ Sbjct: 372 ITMAVYLTISLVTATGMNLYNRRVALIER 400 >gi|83592339|ref|YP_426091.1| amino acid ABC transporter permease [Rhodospirillum rubrum ATCC 11170] gi|83575253|gb|ABC21804.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Rhodospirillum rubrum ATCC 11170] Length = 398 Score = 274 bits (700), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 173/385 (44%), Positives = 232/385 (60%), Gaps = 3/385 (0%) Query: 15 RMKFLYDMRVHNISVQIILALLLTVIFLWCV-NNVYNNMEKSNLSLGIGFLSERAGFEID 73 R L D RV I+ Q+ L + V F W + +N NM ++ G FL AGF I Sbjct: 15 RPHPLRDPRVRAIAFQV-LTIAALVWFFWAIFDNTLTNMRTRGITTGFAFLDHSAGFGIL 73 Query: 74 QGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYV 133 ++PY SY +VG +NT ++ G+I AT+IG +VG RLS N L+A + +YV Sbjct: 74 MSLIPYDETYSYGRTFVVGLLNTLLVSGLGVIAATLIGFVVGVARLSRNWLIAKLALIYV 133 Query: 134 EVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFS 193 E RNIP L+ IFF Y +VL LP P S+ L FLNNRG P+ + + Sbjct: 134 ETLRNIPLLLQIFFWYFAVLRPLPQPRQSLELGALFFLNNRGFYMPSPIAGDGMALVGLA 193 Query: 194 FVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ 253 V+ + L+L R + TG P L+ GLP L +AL + FD P L Sbjct: 194 LVVALALALAIGRWATRRRMATGLGFPSWRTGLALVLGLPLLAFLALGTPVTFDVPHLQG 253 Query: 254 FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313 FNF+GGS + PE ++L +ALS YTAAFIAEIVRSG++AV GQ EAA +LGL RL Sbjct: 254 FNFVGGSRLIPEMVALLLALSMYTAAFIAEIVRSGILAVSHGQTEAAHSLGLKPTATLRL 313 Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMF 372 ++LPQA+R +IPP TSQYLNL+KNSSLA A+G+ DLVSV GT +NQTGQA+EI+ + M Sbjct: 314 IVLPQALRVMIPPTTSQYLNLIKNSSLATAIGYPDLVSVFMGTTLNQTGQAVEIVGMTMA 373 Query: 373 IYLSLSIMIALFMNRLNAKIALKEK 397 +YL +S++++ MN N +ALKE+ Sbjct: 374 VYLLISLVVSGLMNWYNRAVALKER 398 >gi|70728431|ref|YP_258180.1| general amino acid ABC transporter permease [Pseudomonas fluorescens Pf-5] gi|68342730|gb|AAY90336.1| general amino acid ABC transporter, permease protein [Pseudomonas fluorescens Pf-5] Length = 393 Score = 273 bits (699), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 162/380 (42%), Positives = 229/380 (60%), Gaps = 1/380 (0%) Query: 19 LYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVP 78 L D RV QII + + + + +N N++ ++ G FL AGF I Q ++ Sbjct: 14 LSDPRVRAWLFQIITLVAVVSLGWFLFDNTQTNLQHRGITSGFDFLERSAGFGIAQHLIA 73 Query: 79 YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138 YT SYA ++G +NT + F G+I AT++G ++G RLS N +++ + VYVEVFRN Sbjct: 74 YTEADSYARVFVIGLLNTLLVTFIGVILATLLGFIIGVARLSPNWIISKLATVYVEVFRN 133 Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198 IPPL+ I F Y +V +P P +S F+++RGL+ P M FV S VL I Sbjct: 134 IPPLLQILFWYFAVFLTMPGPRNSHNFGDMFFVSSRGLNMPAAQMAPGFWAFVASLVLAI 193 Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258 R + E TG + L+ +P L + +H++ P L FNF+G Sbjct: 194 GAIALMCRWANRRFEATGVPFHKFWSGLGLLLVIPALCTLIFGSPVHWEMPKLAGFNFVG 253 Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G + PE ++L +AL+ YTAAFIAEIVRSG+ +V GQ EAA +LGL + R V++PQ Sbjct: 254 GWVLIPELLALTLALTVYTAAFIAEIVRSGIKSVSHGQTEAARSLGLRNGPTLRKVIIPQ 313 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSL 377 A+R IIPPLTSQYLNL KNSSLA +G+ ++VS+ GT++NQTGQAIE+I I M +YL++ Sbjct: 314 ALRVIIPPLTSQYLNLAKNSSLAAGIGYPEMVSLFAGTVLNQTGQAIEVIAITMSVYLAI 373 Query: 378 SIMIALFMNRLNAKIALKEK 397 SI I+L MN N +IAL E+ Sbjct: 374 SISISLLMNWYNKRIALIER 393 >gi|152998389|ref|YP_001343224.1| polar amino acid ABC transporter inner membrane subunit [Marinomonas sp. MWYL1] gi|150839313|gb|ABR73289.1| polar amino acid ABC transporter, inner membrane subunit [Marinomonas sp. MWYL1] Length = 391 Score = 273 bits (699), Expect = 3e-71, Method: Compositional matrix adjust. Identities = 162/386 (41%), Positives = 232/386 (60%), Gaps = 4/386 (1%) Query: 14 SRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEID 73 S FL D + QI+L ++ + +N+ N++ +S G F +E AGF I Sbjct: 8 SNNSFLNDAGNRALIFQILLLAMVVFAGYYLFSNLQANLDNRGISTGFSFFNEPAGFPIL 67 Query: 74 QGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYV 133 ++ YT ++Y A +V +NTF ++ G+I ATIIG ++G RLS N LVA + VY+ Sbjct: 68 IHLIEYTEANTYGRAFVVALINTFVISLLGIILATIIGVIMGLARLSKNWLVARLATVYI 127 Query: 134 EVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFL-NNRGLSFPTLTMDTNAKIFVF 192 E RNIP L+ +FF Y +VL+ LP P S F FL N RG+ P + + +F Sbjct: 128 ETLRNIPLLLQMFFWYFAVLAALPAPRDS--YEFADFLLNKRGIYSPNPLIQDGFGLVIF 185 Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252 F+L IV S+ ++ +TG P + S +I G+ + L + + FD P Sbjct: 186 GFILSIVASIGVIIWAKKRQTRTGLWFPAYWTSLGVIVGITFIFLAMAGFPIEFDLPQKS 245 Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312 +FN GG + PEF+++ +ALS YT AFIAEIVR+G+++V GQ EAA +LGL R Sbjct: 246 RFNVTGGMVLPPEFVAVLVALSTYTGAFIAEIVRAGILSVNWGQTEAARSLGLRDSMTQR 305 Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS-VGGTIINQTGQAIEIILIWM 371 L++LPQA+R IIPPLTSQYLNL KNSSL A+ + +LV+ V GT +NQTGQAIE I + M Sbjct: 306 LIVLPQALRVIIPPLTSQYLNLAKNSSLGAAIAYPELVAVVMGTTLNQTGQAIETIGLCM 365 Query: 372 FIYLSLSIMIALFMNRLNAKIALKEK 397 +Y SLS+ I++FMN N K++L E+ Sbjct: 366 LVYGSLSLSISVFMNWYNNKMSLIER 391 >gi|261213749|ref|ZP_05928030.1| polar amino acid ABC transporter [Brucella abortus bv. 3 str. Tulya] gi|260915356|gb|EEX82217.1| polar amino acid ABC transporter [Brucella abortus bv. 3 str. Tulya] Length = 372 Score = 273 bits (699), Expect = 3e-71, Method: Compositional matrix adjust. Identities = 142/308 (46%), Positives = 195/308 (63%) Query: 19 LYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVP 78 LYD R I Q+++ + W V N N++++N++ G GFL RAGF+I Q ++ Sbjct: 19 LYDPRARGIFYQVVVFGAVIAGIYWIVGNTITNLQRANIASGFGFLYGRAGFDISQTLIQ 78 Query: 79 YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138 Y SDS+Y A LVG VNT ++A G++ A+IIG LVG GRLS N L+ IC VYVEVFRN Sbjct: 79 YNSDSTYGRAFLVGLVNTLYVAALGVVTASIIGFLVGIGRLSHNWLIRNICTVYVEVFRN 138 Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198 IPPL+VIFF Y VLSVLP S +P ++NNRG P+ A + ++GI Sbjct: 139 IPPLLVIFFWYFGVLSVLPPVRQSYSMPLSTYINNRGFFMPSPVWGEGAWAVPVALLIGI 198 Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258 + S R ++ TG+ + +S LI GLP L LIA + + FD P LG FN G Sbjct: 199 LASFAVARWAKRRQMATGQPFHTIRVSAALIIGLPILALIATGFPVSFDVPKLGTFNLTG 258 Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G+ + PEF++L++ALS YTA+FIAE VR+G++ V +GQ EAA A+GL + RL+++PQ Sbjct: 259 GAQIKPEFLALFLALSFYTASFIAETVRAGVLGVSKGQTEAAYAVGLRSGQTMRLIIVPQ 318 Query: 319 AMRSIIPP 326 A+R IIPP Sbjct: 319 ALRIIIPP 326 >gi|242280379|ref|YP_002992508.1| polar amino acid ABC transporter inner membrane subunit [Desulfovibrio salexigens DSM 2638] gi|242123273|gb|ACS80969.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio salexigens DSM 2638] Length = 459 Score = 273 bits (698), Expect = 4e-71, Method: Compositional matrix adjust. Identities = 149/322 (46%), Positives = 206/322 (63%) Query: 76 IVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEV 135 I YT SSY A+L G NT + G + +TI+G LV GRLS N L++ ICR YVE+ Sbjct: 138 IAHYTESSSYFMALLTGLGNTLKVTVIGCVASTILGLLVALGRLSPNWLLSNICRWYVEL 197 Query: 136 FRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFV 195 RN+P L+ +FF Y VL LP SI L + LN RGL P L A IF + V Sbjct: 198 NRNLPVLLQLFFWYFIVLQQLPNVRKSIDLGGWLILNKRGLYMPALVPQQGAWIFCAAVV 257 Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFN 255 +G R ++ ++TGK++ L+ S ++ GLP + + D PVL FN Sbjct: 258 VGFAAIWIIRRRAKRILDETGKSVKTLFPSLAVLIGLPAVAWLLGGQPFTLDFPVLKGFN 317 Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315 F GG+ ++PEF +L + L+ Y +AF AEI+RSG+ AV +GQ EAA AL + R+ R+V+ Sbjct: 318 FKGGTGLTPEFTALVVGLTVYVSAFNAEIIRSGIEAVSKGQREAARALAMNERQVMRIVI 377 Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375 LPQAMR I+PP+TS+YL + KNSSLAVA+G+ + VSVGGTI+NQ+GQA+EI+ IWM +YL Sbjct: 378 LPQAMRIIVPPMTSEYLAIAKNSSLAVAIGYPEFVSVGGTILNQSGQAVEIVGIWMGVYL 437 Query: 376 SLSIMIALFMNRLNAKIALKEK 397 +S+ I+ MN N+K+AL E+ Sbjct: 438 CISLFISFGMNIYNSKVALVER 459 >gi|170720091|ref|YP_001747779.1| polar amino acid ABC transporter inner membrane subunit [Pseudomonas putida W619] gi|169758094|gb|ACA71410.1| polar amino acid ABC transporter, inner membrane subunit [Pseudomonas putida W619] Length = 392 Score = 273 bits (697), Expect = 5e-71, Method: Compositional matrix adjust. Identities = 164/380 (43%), Positives = 230/380 (60%), Gaps = 1/380 (0%) Query: 19 LYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVP 78 L D RV QI+ + + + + +N N++ ++ G FL AGF I Q ++P Sbjct: 13 LSDPRVRAWLFQILTIIFVVGLGWYLFHNTQTNLQHRGITSGFDFLDRSAGFGIAQHLIP 72 Query: 79 YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138 Y SYA ++G +NT + F G+I ATI+G ++G RLS N ++ + VYVE FRN Sbjct: 73 YVESDSYARVFVIGLLNTLLVTFIGVILATILGFIIGVARLSPNWMINKLATVYVETFRN 132 Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198 IPPL+ I F Y +V LP P SI F++NRGL+ P TM FV + VL I Sbjct: 133 IPPLLQILFWYFAVFLTLPGPRGSINFDDAFFISNRGLNMPGATMAEGFWPFVAAVVLAI 192 Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258 V + R + +TG+ + L+ +P L + +H++ P L FNF+G Sbjct: 193 VAIMAMVRYANKRFNETGEPFHKFWAGLALLVVIPGLCALLFGSPVHWEVPQLKGFNFVG 252 Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G + PE ++L +AL+ YTAAFIAEIVRSG+ +V GQ EAA +LGL R V++PQ Sbjct: 253 GWVLIPELLALTLALTIYTAAFIAEIVRSGIRSVSHGQTEAARSLGLREGPTLRKVIIPQ 312 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSL 377 A+R IIPPLTSQYLNL KNSSLA +G+ ++VS+ GT++NQTGQAIE+I I M +YL++ Sbjct: 313 ALRVIIPPLTSQYLNLAKNSSLAAGIGYPEMVSLFAGTVLNQTGQAIEVIAITMSVYLAI 372 Query: 378 SIMIALFMNRLNAKIALKEK 397 SI I+L MN N +IAL E+ Sbjct: 373 SISISLLMNWYNKRIALIER 392 >gi|330873114|gb|EGH07263.1| polar amino acid ABC transporter, inner membrane subunit [Pseudomonas syringae pv. morsprunorum str. M302280PT] gi|330963202|gb|EGH63462.1| polar amino acid ABC transporter, inner membrane subunit [Pseudomonas syringae pv. actinidiae str. M302091] Length = 393 Score = 273 bits (697), Expect = 5e-71, Method: Compositional matrix adjust. Identities = 157/381 (41%), Positives = 234/381 (61%), Gaps = 3/381 (0%) Query: 19 LYDMRVHNISVQIILALLLTVIFLWCV-NNVYNNMEKSNLSLGIGFLSERAGFEIDQGIV 77 L D +V QII ++ + F W + +N N++ ++ G GFL AGF I Q ++ Sbjct: 14 LSDPKVRAWLFQII-TVVAVIAFGWFIFDNTQTNLQHRGITSGFGFLENSAGFGIAQHLI 72 Query: 78 PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137 Y+ +YA ++G +NT ++ G++ AT++G ++G RLS N +++ + VYVEVFR Sbjct: 73 DYSESDTYARVFVIGLLNTLLVSVIGIVLATLLGFVIGVARLSPNWMISKLATVYVEVFR 132 Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLG 197 NIPPL+ I F Y +V LP P + ++++RGL+ P A F+ S V+ Sbjct: 133 NIPPLLQILFWYTAVFLTLPGPRQAHGYLDMFYVSSRGLNMPGALPAEGAWAFLISIVVA 192 Query: 198 IVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFI 257 ++ + R + E TG+ ++ L+ +P L + +H++ P L FNF Sbjct: 193 VIAVVMMVRWANKRFEATGQPFHKFWVGLALLLVIPGLSTLIFGSPVHWEVPQLKGFNFT 252 Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317 GG + PE +SL +AL+ YTAAFIAEIVRSG+ +V GQ EAA +LGL R V++P Sbjct: 253 GGWVLIPELISLTLALTIYTAAFIAEIVRSGIKSVSHGQTEAARSLGLRPGPTLRKVIIP 312 Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLS 376 QA+R IIPPLTSQ+LNL KNSSLA A+G+ ++VS+ GT++NQTGQAIE+I I M +YL+ Sbjct: 313 QALRVIIPPLTSQFLNLAKNSSLAAAIGYPEMVSLFAGTVLNQTGQAIEVIAITMSVYLA 372 Query: 377 LSIMIALFMNRLNAKIALKEK 397 +SI I+L MN N +IAL E+ Sbjct: 373 ISISISLLMNWYNKRIALIER 393 >gi|323189119|gb|EFZ74403.1| general L-amino acid transport system permease protein aapQ [Escherichia coli RN587/1] Length = 393 Score = 272 bits (696), Expect = 6e-71, Method: Compositional matrix adjust. Identities = 155/369 (42%), Positives = 225/369 (60%), Gaps = 1/369 (0%) Query: 30 QIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAI 89 QI+ + + I W +N N+ ++ G FL AGF I Q ++ Y +Y Sbjct: 25 QILAVVAVVGIVGWLFHNTVTNLSNRGITSGFAFLDRGAGFGIVQHLIDYQQGDTYGRVF 84 Query: 90 LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 +VG +NT ++ ++ A+++G +G RLS N L+ + +Y+E+FRNIPPL+ IFF Y Sbjct: 85 IVGLLNTLLVSALCIVFASVLGFFIGLARLSDNWLLRKLSTIYIEIFRNIPPLLQIFFWY 144 Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209 +VL LP P ++ FL+NRGL P+ + F+ + V+ IVLS+ R ++ Sbjct: 145 FAVLRNLPGPRQAVSAFDLAFLSNRGLYIPSPQLGDGFIAFILAVVMAIVLSVGLFRFNK 204 Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269 + KTG+ + LI GLP L L +D P L FNF GG + PE +L Sbjct: 205 TYQIKTGQLRRTWPFAAVLIIGLPLLAQWLFGAALLWDVPALRGFNFRGGMVLIPELAAL 264 Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329 +ALS YT+AFIAEI+R+G+ AVP GQ EAA +LGL + R V++PQA+R IIPPL S Sbjct: 265 TLALSVYTSAFIAEIIRAGIQAVPYGQHEAARSLGLPNPVTLRQVIIPQALRVIIPPLAS 324 Query: 330 QYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388 QYLN++KNSSLA A+G+ D+VS+ GT++NQTGQAIE I + M +YL +S+ I+L MN Sbjct: 325 QYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAMTMSVYLIISLTISLLMNIY 384 Query: 389 NAKIALKEK 397 N +IA+ E+ Sbjct: 385 NRRIAIVER 393 >gi|77457201|ref|YP_346706.1| amino acid ABC transporter permease [Pseudomonas fluorescens Pf0-1] gi|77381204|gb|ABA72717.1| amino acid ABC transporter membrane protein 1, PAAT family [Pseudomonas fluorescens Pf0-1] Length = 393 Score = 272 bits (695), Expect = 7e-71, Method: Compositional matrix adjust. Identities = 164/380 (43%), Positives = 232/380 (61%), Gaps = 1/380 (0%) Query: 19 LYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVP 78 L D RV QII + + + + +N N++ ++ G FL AGF I Q ++ Sbjct: 14 LSDPRVRAWVFQIITIVAVVSLGWYLFDNTQTNLQHRGITSGFDFLERSAGFGIAQHLIS 73 Query: 79 YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138 YT SYA ++G +NT + F G+I ATI+G +VG RLS N +++ + VYVEVFRN Sbjct: 74 YTEADSYARVFVIGLLNTLLVTFIGVILATILGFIVGVARLSKNWIISKLATVYVEVFRN 133 Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198 IPPL+ I F Y +V +P P +S F+++RGL+ P M FV S V+ I Sbjct: 134 IPPLLQILFWYFAVFLTMPGPRNSHNFGDTFFVSSRGLNMPAAQMADGFWAFVVSIVVAI 193 Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258 V + +R + E TG+ + L +P L + +H++ P L FNF+G Sbjct: 194 VAIVLMSRWANKRFEATGEPFHKFWAGLALFLVIPALCALIFGAPVHWEMPKLQGFNFVG 253 Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G + PE ++L +AL+ YTAAFIAEIVRSG+ +V GQ EAA +LGL + R V++PQ Sbjct: 254 GWVLIPELLALTLALTVYTAAFIAEIVRSGIKSVSHGQTEAAHSLGLRNGPTLRKVIIPQ 313 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSL 377 A+R IIPPLTSQYLNL KNSSLA +G+ ++VS+ GT++NQTGQAIE+I I M +YL++ Sbjct: 314 ALRVIIPPLTSQYLNLAKNSSLAAGIGYPEMVSLFAGTVLNQTGQAIEVIAITMSVYLAI 373 Query: 378 SIMIALFMNRLNAKIALKEK 397 SI I+L MN N +IAL E+ Sbjct: 374 SISISLLMNWYNKRIALIER 393 >gi|302062365|ref|ZP_07253906.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tomato K40] Length = 362 Score = 272 bits (695), Expect = 8e-71, Method: Compositional matrix adjust. Identities = 150/361 (41%), Positives = 226/361 (62%), Gaps = 2/361 (0%) Query: 39 VIFLWCV-NNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTF 97 + F W + +N N++ ++ G GFL AGF I Q ++ Y+ +YA ++G +NT Sbjct: 2 IAFGWFIFDNTQTNLQHRGITSGFGFLENSAGFGIAQHLIDYSESDTYARVFVIGLLNTL 61 Query: 98 WLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLP 157 ++ G++ AT++G ++G RLS N +++ + VYVEVFRNIPPL+ I F Y +V LP Sbjct: 62 LVSVIGIVLATLLGFVIGVARLSPNWMISKLATVYVEVFRNIPPLLQILFWYTAVFLTLP 121 Query: 158 IPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGK 217 P + ++++RGL+ P A F+ S V+ ++ + R + E TG+ Sbjct: 122 GPRQAHGYLDMFYVSSRGLNMPGALPAEGAWAFLISIVVAVIAVVMMVRWANKRFEATGQ 181 Query: 218 ALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT 277 ++ L+ +P L ++ +H++ P L FNF GG + PE +SL +AL+ YT Sbjct: 182 PFHKFWVGLALLLAIPGLSMLIFGSPVHWELPQLKGFNFTGGWVLIPELISLTLALTIYT 241 Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 AAFIAEIVRSG+ +V GQ EAA +LGL R V++PQA+R IIPPLTSQ+LNL KN Sbjct: 242 AAFIAEIVRSGIKSVSHGQTEAARSLGLRPGPTLRKVIIPQALRVIIPPLTSQFLNLAKN 301 Query: 338 SSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 SSLA A+G+ ++VS+ GT++NQTGQAIE+I I M +YL++SI I++ MN N +IAL E Sbjct: 302 SSLAAAIGYPEMVSLFAGTVLNQTGQAIEVIAITMSVYLAISISISMLMNWYNKRIALIE 361 Query: 397 K 397 + Sbjct: 362 R 362 >gi|146278536|ref|YP_001168695.1| polar amino acid ABC transporter, inner membrane subunit [Rhodobacter sphaeroides ATCC 17025] gi|145556777|gb|ABP71390.1| polar amino acid ABC transporter, inner membrane subunit [Rhodobacter sphaeroides ATCC 17025] Length = 420 Score = 271 bits (694), Expect = 9e-71, Method: Compositional matrix adjust. Identities = 168/405 (41%), Positives = 236/405 (58%), Gaps = 28/405 (6%) Query: 19 LYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVP 78 LYD R ++++Q+ + L W V+N N+E GFL RAG++I Q +V Sbjct: 18 LYDTRYRSLTIQVFVFFLFMAGAAWLVDNTMRNLEALGKDFNFGFLWNRAGYDISQRLVE 77 Query: 79 YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138 YT+DS++ A+LVG +NT +A G I AT+IG +VG RLS N LV + VYVE+FRN Sbjct: 78 YTNDSTHGRAMLVGLLNTLLVALLGCIAATVIGVIVGVLRLSKNWLVGRLMTVYVEIFRN 137 Query: 139 IPPLVVIFFLYKSVLSVLPIPD------HSIVLPFGMFLN-----NRGLSFPT------- 180 +P L+ I +Y P P+ + + MFL+ NR + P Sbjct: 138 VPLLLWILLIYAVFTEATPAPNAFRPNPETGLADRSMFLDAIAVTNRYTAVPNPVFSREL 197 Query: 181 -------LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233 ++ + + + VLG L+ + +TG + S L+ GLP Sbjct: 198 GWLDLGLFYINIDVLAVLAAAVLGWWLNRMVKARATRIQNETGVRPATWWSSVLLLLGLP 257 Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293 VL+AL + L F P L FNF+GG VS FM+L++ALS YT AFIAEIVR+G++A+ Sbjct: 258 VAVLLALGFHLEF--PELRGFNFVGGLNVSNSFMALWLALSLYTGAFIAEIVRAGILAIS 315 Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV-SV 352 RGQ EAA ALGL + LV+LPQA+R IIPPL SQYLNL KNSSLA+AVG+ DL ++ Sbjct: 316 RGQSEAAFALGLRPGRTMSLVILPQALRVIIPPLISQYLNLTKNSSLAIAVGYLDLRGTL 375 Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 GG +NQTG+ +E +L+ M IYL++S++I+ MN NA + LKE+ Sbjct: 376 GGITLNQTGRELECVLLMMLIYLAISLVISAVMNVYNAAVKLKER 420 >gi|149908407|ref|ZP_01897070.1| general L-amino acid transport system permease protein AapQ [Moritella sp. PE36] gi|149808570|gb|EDM68505.1| general L-amino acid transport system permease protein AapQ [Moritella sp. PE36] Length = 352 Score = 271 bits (693), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 147/352 (41%), Positives = 224/352 (63%), Gaps = 2/352 (0%) Query: 48 VYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSS-YATAILVGFVNTFWLAFSGMIP 106 +++N+ K ++ G FL E AGF I Q ++ Y SS + +VG +NT + G+I Sbjct: 1 MFDNVAKRGITTGFSFLGETAGFGISQSLIHYDDTSSTFLDVFIVGLLNTMLVGVIGIIL 60 Query: 107 ATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLP 166 A+ +G L+G GRLS N L++ + VY+E FRNIP L+ I F Y VL+ LP P S+ Sbjct: 61 ASGLGLLIGIGRLSPNYLISKLSLVYIETFRNIPILLQILFWYNVVLAALPSPRQSLSYF 120 Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226 +F+NNRGL P ++ + + +FV+ + ++ ++ + H+ TG+ P++ +S Sbjct: 121 DSIFINNRGLIIPDPIFESGSFSILVAFVIACISVVYLSKWANKRHDLTGEEFPVIRVSI 180 Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286 ++ G P L+ + + P L FNF GG T+ PE ++L ALS YTA +IAE VR Sbjct: 181 GMLIGAPLLMFFLAGQPISAEYPALKGFNFKGGITIIPELLALIFALSIYTATYIAEAVR 240 Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346 +G+ AVP+GQ EAA +LGL R V+LPQA+R IIPP+ +QYLNL+KNSSLA A+G+ Sbjct: 241 AGIEAVPQGQKEAAKSLGLKEHVILRKVILPQALRVIIPPVINQYLNLVKNSSLATAIGY 300 Query: 347 ADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 ++V++ GT +NQ GQAIEIIL+ M +YL SI+I+L +N +NA++ +K + Sbjct: 301 PEIVTLFSGTTLNQVGQAIEIILMTMAVYLVFSIVISLLLNWVNARMEIKGR 352 >gi|148658094|ref|YP_001278299.1| polar amino acid ABC transporter inner membrane subunit [Roseiflexus sp. RS-1] gi|148570204|gb|ABQ92349.1| polar amino acid ABC transporter, inner membrane subunit [Roseiflexus sp. RS-1] Length = 396 Score = 271 bits (692), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 162/408 (39%), Positives = 245/408 (60%), Gaps = 23/408 (5%) Query: 1 MIKNARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLG 60 M R T SR F D RV ++ QI+ L+ + + N+ ++++ L LG Sbjct: 1 MEHPPRSTSPMRLSR-AFWRDERVIQVAAQILFLALVIWVGSIALRNMLTSLQQQGLVLG 59 Query: 61 IGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLS 120 FL+ AGF+I +PY+S ++A A+ VG +NT ++ G++ +T++G +VG RLS Sbjct: 60 FDFLNSGAGFDISDAPIPYSSTDTFARALQVGLLNTILVSVLGIVLSTLLGIVVGVARLS 119 Query: 121 ANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFP- 179 +N LV + V+VEV RN+P LV++ F+Y + LP ++ L ++L+NRG++ P Sbjct: 120 SNWLVNRMAWVFVEVMRNVPLLVLLVFIYTAFFLKLPRARQAVSL-GPIYLSNRGVAIPW 178 Query: 180 ---TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV 236 T T + + + + G V+ L R + ++G+ P + S L T+ Sbjct: 179 GEPTDTWSLYVSVLIGALIAGAVVGLAM----RWWQNRSGRPRPQVVPS------LLTMT 228 Query: 237 LIAL-------KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289 LIAL + L P + FNF GG +SPEFM+L I L YTAAFI E+VR+G+ Sbjct: 229 LIALIGWFALPQPPLALSLPEIAGFNFRGGQVLSPEFMALLIGLVIYTAAFIGEVVRAGI 288 Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349 AVP+GQ+EAA ALGL + RLV+ PQA+R IIPP+T+QYLNL KNS+LAVA+G+ DL Sbjct: 289 QAVPKGQVEAARALGLNPSRTLRLVVFPQALRVIIPPVTNQYLNLTKNSTLAVAIGYPDL 348 Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 ++ GTIINQTG+A+E+I + M +YL LS++ +L MN N ++ L E+ Sbjct: 349 FAISGTIINQTGRAVEMIAVVMAVYLMLSLITSLVMNWYNRRVRLVER 396 >gi|317049796|ref|YP_004117444.1| polar amino acid ABC transporter inner membrane subunit [Pantoea sp. At-9b] gi|316951413|gb|ADU70888.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea sp. At-9b] Length = 392 Score = 270 bits (691), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 156/356 (43%), Positives = 218/356 (61%), Gaps = 1/356 (0%) Query: 43 WCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFS 102 + ++N N+ ++ G GFL AGF I Q ++ YT +YA +VG NT ++ Sbjct: 37 YLIHNTVINLANRGITSGFGFLERSAGFGIVQHLIDYTEGDTYARVFMVGLTNTLLVSAL 96 Query: 103 GMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHS 162 ++ A+I+G +G RLS N L+ + +Y+E FRNIPPL+ IFF Y +VL LP P + Sbjct: 97 CIVFASILGFFIGLARLSDNWLLRRLSTIYIETFRNIPPLLQIFFWYFAVLRNLPGPRQA 156 Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222 + F++NRGL P T FV + +L I S+ R +R KTG+ Sbjct: 157 LNAFDLAFVSNRGLYIPWPTYAPGTWPFVIALLLAIAGSVGLFRFNRKHQLKTGQLRRTW 216 Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282 I+ +I P + H+D P L FNF GG + PE SL +ALS YT++FIA Sbjct: 217 PIAAAMIILFPLIAHAMFGAATHWDVPELRGFNFRGGFVMIPELASLTLALSIYTSSFIA 276 Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342 E++RSG+ +VP GQ EAA +LGL + R V++PQAMR IIPPLTSQYLN++KNSSLA Sbjct: 277 EVIRSGIQSVPHGQNEAARSLGLPNPVTMRQVIIPQAMRVIIPPLTSQYLNIVKNSSLAA 336 Query: 343 AVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 A+G+ D+VS+ GT++NQTGQAIE I I M +YL +S++I+L MN N KIAL E+ Sbjct: 337 AIGYPDMVSLFAGTVLNQTGQAIETIAITMAVYLIISLVISLLMNLYNRKIALVER 392 >gi|146340849|ref|YP_001205897.1| putative amino acid transport protein, permease [Bradyrhizobium sp. ORS278] gi|146193655|emb|CAL77672.1| putative amino acid transport protein, permease protein [Bradyrhizobium sp. ORS278] Length = 401 Score = 270 bits (691), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 152/361 (42%), Positives = 228/361 (63%), Gaps = 5/361 (1%) Query: 31 IILALLLTVIFLWC----VNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYA 86 IIL +L + +W V N +N+ ++ G GFL+ AGF+++Q ++ Y+ SY+ Sbjct: 29 IILQILFVAVLVWVGYEIVANARSNLAAQRITSGFGFLNNTAGFDVNQALISYSGSDSYS 88 Query: 87 TAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIF 146 ++VG +NT ++ G++ ATI+G +V GRLS N L++ + YVE+ RN+P L I Sbjct: 89 RVLMVGILNTLLVSVIGIVLATILGLIVALGRLSPNGLLSRVAGAYVELIRNLPLLFQIT 148 Query: 147 FLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATR 206 F Y +VL+ LP P SI + FLNNRG P + F+ + + I S+ Sbjct: 149 FWYLAVLAALPGPRQSISVFSTFFLNNRGFIVPRPIEEPGLMPFLIALGVAIAGSIGLRF 208 Query: 207 LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF 266 +R G A+ + ++ GLP L L+ + F+ PVL FNF GGS + PEF Sbjct: 209 YARRELFVRGHAMRIWPYVLGMLIGLPLLALVVFGAPVAFEVPVLKGFNFAGGSRIIPEF 268 Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326 ++L +AL+ YTA+FIAE+VR G+++V +GQMEA ++LGL+ RL+++PQA+R I+PP Sbjct: 269 VALTLALTMYTASFIAEVVRGGILSVHKGQMEAGLSLGLSRGTVLRLIVVPQALRVILPP 328 Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 LT+QYLNL KNSSLAVA+G+ DLVSV GT ++QTGQAIEII I M +YL++S++ + M Sbjct: 329 LTNQYLNLTKNSSLAVAIGYPDLVSVFAGTTMSQTGQAIEIIGITMGVYLAMSLITSAIM 388 Query: 386 N 386 + Sbjct: 389 S 389 >gi|153839317|ref|ZP_01991984.1| general L-amino acid transport system permease protein AapQ [Vibrio parahaemolyticus AQ3810] gi|149747149|gb|EDM58137.1| general L-amino acid transport system permease protein AapQ [Vibrio parahaemolyticus AQ3810] Length = 401 Score = 270 bits (691), Expect = 3e-70, Method: Compositional matrix adjust. Identities = 166/372 (44%), Positives = 231/372 (62%), Gaps = 21/372 (5%) Query: 37 LTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNT 96 L F +NN NN++ ++ G GFL++ AGF I ++ Y SY +VG +NT Sbjct: 40 LVFFFYTIINNALNNLDARGIATGFGFLNQEAGFGIGLTLIEYNETYSYGRTFIVGLLNT 99 Query: 97 FWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVL 156 ++ G+I AT IG +G RLS N LV+ + VY+E FRNIP L+ IFF Y +VL L Sbjct: 100 ALVSVLGIILATAIGFTMGVARLSTNWLVSRLAAVYIETFRNIPLLLQIFFWYFAVLQAL 159 Query: 157 PIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTG 216 P S+ L +FLN RGL FP + + + + +FV+G++ ++ + +R+ TG Sbjct: 160 PSARQSLSLGEAIFLNVRGLYFPAPVFNEGSGVVIAAFVIGLIATISISIWARNKQRLTG 219 Query: 217 KALPLLYIST----------FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF 266 + P+ I + + G+P I+L+Y P L FNF GG ++ PE Sbjct: 220 QQTPMGRIGLGLLVGLPLLVYFVSGMP----ISLEY------PELKGFNFKGGISIIPEL 269 Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326 +L +ALS YTAAFIAEIVRSG+ AV GQ EAA++LGL K +LV++PQA+R IIPP Sbjct: 270 AALLLALSVYTAAFIAEIVRSGINAVSHGQTEAAMSLGLPRAKTLKLVVIPQALRIIIPP 329 Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 LTSQYLNL KNSSLA+A+G+ DLVSV GT +NQTGQAIEII + M +YL+LS++ + M Sbjct: 330 LTSQYLNLTKNSSLAMAIGYPDLVSVFAGTTLNQTGQAIEIIAMTMGVYLTLSLLTSALM 389 Query: 386 NRLNAKIALKEK 397 N N K+AL E+ Sbjct: 390 NLYNRKVALVER 401 >gi|328473627|gb|EGF44462.1| amino acid ABC transporter, permease protein [Vibrio parahaemolyticus 10329] Length = 401 Score = 270 bits (690), Expect = 3e-70, Method: Compositional matrix adjust. Identities = 166/372 (44%), Positives = 230/372 (61%), Gaps = 21/372 (5%) Query: 37 LTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNT 96 L F +NN NN++ ++ G GFL + AGF I ++ Y SY +VG +NT Sbjct: 40 LVFFFYTIINNALNNLDARGIATGFGFLKQEAGFGIGLTLIEYNETYSYGRTFIVGLLNT 99 Query: 97 FWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVL 156 ++ G+I AT IG +G RLS N LV+ + VY+E FRNIP L+ IFF Y +VL L Sbjct: 100 ALVSVLGIILATAIGFTMGVARLSTNWLVSRLAAVYIETFRNIPLLLQIFFWYFAVLQAL 159 Query: 157 PIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTG 216 P S+ L +FLN RGL FP + + + + +FV+G++ ++ + +R+ TG Sbjct: 160 PSARQSLSLGEAIFLNVRGLYFPAPVFNEGSGVVIAAFVIGLIATISISIWARNKQRLTG 219 Query: 217 KALPLLYIST----------FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF 266 + P+ I + + G+P I+L+Y P L FNF GG ++ PE Sbjct: 220 QQTPMGRIGLGLLVGLPLLVYFVSGMP----ISLEY------PELKGFNFKGGISIIPEL 269 Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326 +L +ALS YTAAFIAEIVRSG+ AV GQ EAA++LGL K +LV++PQA+R IIPP Sbjct: 270 AALLLALSVYTAAFIAEIVRSGINAVSHGQTEAAMSLGLPRAKTLKLVVIPQALRIIIPP 329 Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 LTSQYLNL KNSSLA+A+G+ DLVSV GT +NQTGQAIEII + M +YL+LS++ + M Sbjct: 330 LTSQYLNLTKNSSLAMAIGYPDLVSVFAGTTLNQTGQAIEIIAMTMGVYLTLSLLTSALM 389 Query: 386 NRLNAKIALKEK 397 N N K+AL E+ Sbjct: 390 NLYNRKVALVER 401 >gi|229588542|ref|YP_002870661.1| putative amino acid ABC transporter membrane protein [Pseudomonas fluorescens SBW25] gi|229360408|emb|CAY47265.1| putative amino acid ABC transport system, membrane protein [Pseudomonas fluorescens SBW25] Length = 393 Score = 270 bits (690), Expect = 3e-70, Method: Compositional matrix adjust. Identities = 160/378 (42%), Positives = 226/378 (59%), Gaps = 1/378 (0%) Query: 21 DMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYT 80 D +V QII + + + + NN N++ ++ G FL AGF I Q ++ YT Sbjct: 16 DPKVRAWLFQIITIVAVVSLGWYLFNNTQTNLQHRGITSGFDFLERSAGFGIAQHLIDYT 75 Query: 81 SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140 SYA ++G +NT + F G+I AT++G ++G RLS N ++ + VYVEVFRNIP Sbjct: 76 ESDSYARVFVIGLLNTLLVTFIGVILATLLGFVIGVARLSPNWMINKLATVYVEVFRNIP 135 Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200 PL+ I F Y +V +P P +S F+++RGL+ P FV S V+ I+ Sbjct: 136 PLLQILFWYFAVFLTMPGPRNSHNFGDTFFVSSRGLNMPAALAADGFWPFVASIVVAILA 195 Query: 201 SLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGS 260 + R + E TG + L +P L + LH++ P L FNF+GG Sbjct: 196 IVLMARWANKRFEATGVPFHKFWAGLALFILIPALCALIFGAPLHWEMPKLQGFNFVGGW 255 Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320 + PE ++L +AL+ YTAAFIAEIVRSG+ +V GQ EAA +LGL R V++PQA+ Sbjct: 256 VLIPELLALTLALTVYTAAFIAEIVRSGIKSVSHGQTEAARSLGLRPGPTLRKVIIPQAL 315 Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSI 379 R IIPPLTSQYLNL KNSSLA +G+ ++VS+ GT++NQTGQAIE+I I M +YL++SI Sbjct: 316 RVIIPPLTSQYLNLAKNSSLAAGIGYPEMVSLFAGTVLNQTGQAIEVIAITMSVYLAISI 375 Query: 380 MIALFMNRLNAKIALKEK 397 I+L MN N +IAL E+ Sbjct: 376 SISLLMNWYNKRIALIER 393 >gi|154253425|ref|YP_001414249.1| polar amino acid ABC transporter inner membrane subunit [Parvibaculum lavamentivorans DS-1] gi|154157375|gb|ABS64592.1| polar amino acid ABC transporter, inner membrane subunit [Parvibaculum lavamentivorans DS-1] Length = 400 Score = 270 bits (690), Expect = 3e-70, Method: Compositional matrix adjust. Identities = 161/351 (45%), Positives = 220/351 (62%), Gaps = 5/351 (1%) Query: 50 NNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATI 109 N+ + N+S G+GFL AGF I Q ++PYT SSY A LVG +NT +A G++ + + Sbjct: 52 ENLARLNISSGLGFLDTTAGFGIIQTLIPYTEQSSYGRAFLVGLLNTLVVAVIGIVLSVM 111 Query: 110 IGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGM 169 +G +G RLS N L+A I YVE+ RNIP L+ +FF Y +VL LP P SI G+ Sbjct: 112 LGFFIGVMRLSRNWLIAKIAAGYVEIMRNIPLLLHLFFWYFAVLRPLPGPAESISPLPGV 171 Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229 F+NNRGL P A F + + + R +R TG+ P + L+ Sbjct: 172 FINNRGLILPEPIFGATASAFFIAIAVALAAGFLLIRWARKRQVATGQLFPAWRTAVALL 231 Query: 230 FGLPTLVLI--ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287 LP LV + ++L F + F+F GG + PEF++L + L+ YTA FIAEIVR+ Sbjct: 232 VVLPGLVWLVAGAPFELAFARHA--GFDFDGGMRLLPEFVALVLGLTLYTAGFIAEIVRA 289 Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347 G+++V +GQ EAA ALGL RLV++PQA+R IIPPLTSQ LNL KNSSLAVA+ + Sbjct: 290 GILSVSKGQREAAAALGLKDSTTLRLVVIPQALRLIIPPLTSQILNLTKNSSLAVAIAYP 349 Query: 348 DLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 DLV+V GT++NQTGQAIE+I + M +YL+LS++ +L MN NA IALKE+ Sbjct: 350 DLVAVFAGTVLNQTGQAIEVIALTMAVYLTLSLITSLLMNWYNAHIALKER 400 >gi|283788088|ref|YP_003367953.1| ABC transporter, permease protein [Citrobacter rodentium ICC168] gi|282951542|emb|CBG91241.1| ABC transporter, permease protein [Citrobacter rodentium ICC168] Length = 393 Score = 270 bits (689), Expect = 4e-70, Method: Compositional matrix adjust. Identities = 157/369 (42%), Positives = 226/369 (61%), Gaps = 1/369 (0%) Query: 30 QIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAI 89 QI+ + + + ++ ++N +N+ ++ G FL AGF I Q ++ Y +Y Sbjct: 25 QILAIIAVAAVAIYLIHNTIDNLSNRGITSGFAFLERSAGFGIVQHLIDYQQGDTYGRVF 84 Query: 90 LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 LVG NT ++ ++ A+ +G +G RLS N L+ + VY+E+FRNIPPL+ IFF Y Sbjct: 85 LVGLSNTLLVSALCIVFASALGFFLGLARLSDNWLLRKLSTVYIEIFRNIPPLLQIFFWY 144 Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209 +VL LP P ++ +FL+NRGL P+ FV S ++ I +S+ R +R Sbjct: 145 FAVLRNLPGPRQAVSALDMVFLSNRGLYIPSPQTGEGLLAFVLSLIIAITISVVLFRYNR 204 Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269 KTG+ ++ L+ LP L LH+D P L FNF GG + PE +L Sbjct: 205 MHQTKTGQLRKTWPVAAVLLIALPLLAHWLSGPALHWDMPELKGFNFRGGMVLIPELAAL 264 Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329 +ALS YT+AFIAEI+R+G+ AVP GQ EAA +LGL H R V++PQA+R IIPPLTS Sbjct: 265 TLALSVYTSAFIAEIIRAGIQAVPYGQHEAARSLGLPHAVTLRQVIIPQALRVIIPPLTS 324 Query: 330 QYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388 QYLN++KNSSLA A+G+ D+VS+ GT++NQTGQAIE I I M +YL +S+ I+L MN Sbjct: 325 QYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAITMSVYLLISLSISLLMNIY 384 Query: 389 NAKIALKEK 397 N ++AL E+ Sbjct: 385 NRRMALVER 393 >gi|26988033|ref|NP_743458.1| polar amino acid ABC transporter inner membrane subunit [Pseudomonas putida KT2440] gi|24982753|gb|AAN66922.1|AE016320_10 general amino acid ABC transporter, permease protein [Pseudomonas putida KT2440] Length = 392 Score = 270 bits (689), Expect = 4e-70, Method: Compositional matrix adjust. Identities = 160/380 (42%), Positives = 227/380 (59%), Gaps = 1/380 (0%) Query: 19 LYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVP 78 L D RV QI+ + + + + +N N++ ++ G FL AGF I Q ++P Sbjct: 13 LNDPRVRAWLFQILTIVFVVGLGWYLFHNTQTNLQHRGITSGFDFLDRSAGFGIAQHLIP 72 Query: 79 YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138 Y SYA ++G +NT + F G+I ATI+G ++G RLS N ++ + VYVE FRN Sbjct: 73 YVESDSYARVFVIGLLNTLLVTFIGVILATILGFIIGVARLSPNWMINKLATVYVETFRN 132 Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198 IPPL+ I F Y +V LP P SI + F++NRGL+ P ++ FV + L I Sbjct: 133 IPPLLQILFWYFAVFLTLPGPRGSINIEDMFFISNRGLNMPGASIADGFWPFVVALALAI 192 Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258 R + +TG + L +P+L ++ + +D P L FNF+G Sbjct: 193 AAIALMVRYANKRFNETGVPFHKFWAGLLLFIAIPSLSVLLFGSPVTWDMPQLKGFNFVG 252 Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G + PE ++L +AL+ YTAAFIAEIVRSG+ +V GQ EAA +LGL R V++PQ Sbjct: 253 GWVLIPELLALTLALTIYTAAFIAEIVRSGIRSVSHGQTEAARSLGLREGPTLRKVIIPQ 312 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSL 377 A+R IIPPLTSQYLNL KNSSLA +G+ ++VS+ GT++NQTGQAIE+I I M +YL++ Sbjct: 313 ALRVIIPPLTSQYLNLAKNSSLAAGIGYPEMVSLFAGTVLNQTGQAIEVIAITMSVYLAI 372 Query: 378 SIMIALFMNRLNAKIALKEK 397 SI I+L MN N +IAL E+ Sbjct: 373 SISISLLMNWYNKRIALIER 392 >gi|261823405|ref|YP_003261511.1| polar amino acid ABC transporter inner membrane protein [Pectobacterium wasabiae WPP163] gi|261607418|gb|ACX89904.1| polar amino acid ABC transporter, inner membrane subunit [Pectobacterium wasabiae WPP163] Length = 434 Score = 269 bits (688), Expect = 5e-70, Method: Compositional matrix adjust. Identities = 149/368 (40%), Positives = 226/368 (61%), Gaps = 1/368 (0%) Query: 30 QIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAI 89 Q +L LL+ W NV N+ N++ G GFL A FEI + +V +T SY A+ Sbjct: 68 QCLLGLLIVAFSYWLYANVVENLRSQNIATGFGFLDHTAQFEIGEKLVAFTPRDSYLRAL 127 Query: 90 LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 VG +NT ++ G++ AT++G VG R+S N L+A + Y+E+ RNIP ++ + F + Sbjct: 128 GVGLLNTLYVTLCGIVLATLLGFSVGIARVSRNWLLARLAGGYIEMMRNIPVILQVIF-W 186 Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209 V+ LP P +I L FL NRGLSF + + + ++SL R++R Sbjct: 187 SVVIRNLPSPRDAIELGSLGFLTNRGLSFAVPAAHHGWLLSGIALLAAALISLILNRVAR 246 Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269 + E G++L ++ GLP LV D+P+L FNF GG TVSPEF +L Sbjct: 247 YIRESRGRSLSTGRLTLVAFIGLPLLVWWISGAPAELDRPILRGFNFRGGFTVSPEFTAL 306 Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329 + ++ Y++AFIAEIVR+G+ ++P+GQ+EAA AL + R +++PQAMR I+PPLTS Sbjct: 307 LLGIALYSSAFIAEIVRAGIQSIPKGQLEAARALSFSPWHMMRHIIIPQAMRVIVPPLTS 366 Query: 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 QY++L KNSS+AV VG+ +L ++ T++NQTGQA+E+I I M +YL++SI+ +L MN N Sbjct: 367 QYVSLSKNSSIAVVVGYPELANISNTLMNQTGQALEVIAIMMVVYLTVSIVTSLLMNLFN 426 Query: 390 AKIALKEK 397 +A+KE+ Sbjct: 427 RAVAIKER 434 >gi|325275055|ref|ZP_08141043.1| polar amino acid ABC transporter, inner membrane subunit [Pseudomonas sp. TJI-51] gi|324099818|gb|EGB97676.1| polar amino acid ABC transporter, inner membrane subunit [Pseudomonas sp. TJI-51] Length = 392 Score = 269 bits (688), Expect = 5e-70, Method: Compositional matrix adjust. Identities = 160/380 (42%), Positives = 230/380 (60%), Gaps = 1/380 (0%) Query: 19 LYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVP 78 L D RV QI+ + + + + +N N++ ++ G FL AGF I Q ++P Sbjct: 13 LSDPRVRAWLFQILTIVFVVGLGWYLFHNTQTNLQHRGITSGFDFLDRSAGFGIAQHLIP 72 Query: 79 YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138 Y SYA ++G +NT + F G+I ATI+G ++G RLS N ++ + VYVE FRN Sbjct: 73 YVESDSYARVFVIGLLNTLLVTFIGVILATILGFIIGVARLSPNWMINKLATVYVETFRN 132 Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198 IPPL+ I F Y +V LP P SI L F++NRGL+ P +M FV + + + Sbjct: 133 IPPLLQILFWYFAVFLTLPGPRGSINLNDLFFISNRGLNMPGASMADGFWPFVAALAVAV 192 Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258 RL+ ++TG + + L+ +P L ++ + ++ P L FNF+G Sbjct: 193 GAVWLMVRLANKRFDETGVPFHKFWAALALLLVIPGLSVLLFGCPVTWEAPQLKGFNFVG 252 Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G + PE ++L +AL+ YTAAFIAEIVRSG+ +V GQ EAA +LGL R V++PQ Sbjct: 253 GWVLIPELLALTLALTIYTAAFIAEIVRSGIRSVSHGQTEAARSLGLREGPTLRKVIIPQ 312 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSL 377 A+R IIPPLTSQYLNL KNSSLA +G+ ++VS+ GT++NQTGQAIE+I I M +YL++ Sbjct: 313 ALRVIIPPLTSQYLNLAKNSSLAAGIGYPEMVSLFAGTVLNQTGQAIEVIAITMSVYLAI 372 Query: 378 SIMIALFMNRLNAKIALKEK 397 SI I+L MN N +IAL E+ Sbjct: 373 SISISLLMNWYNKRIALIER 392 >gi|148549629|ref|YP_001269731.1| polar amino acid ABC transporter inner membrane subunit [Pseudomonas putida F1] gi|148513687|gb|ABQ80547.1| polar amino acid ABC transporter, inner membrane subunit [Pseudomonas putida F1] Length = 392 Score = 269 bits (688), Expect = 5e-70, Method: Compositional matrix adjust. Identities = 159/380 (41%), Positives = 231/380 (60%), Gaps = 1/380 (0%) Query: 19 LYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVP 78 L D RV Q++ + + + + +N N++ ++ G FL AGF I Q ++P Sbjct: 13 LNDPRVRAWLFQVLTIVFVVGLGWYLFHNTQTNLQHRGITSGFDFLDRSAGFGIAQHLIP 72 Query: 79 YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138 Y SYA ++G +NT + F G+I ATI+G ++G RLS N +++ + VYVE FRN Sbjct: 73 YVESDSYARVFVIGLLNTLLVTFIGVILATILGFIIGVARLSPNWMISKLATVYVETFRN 132 Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198 IPPL+ I F Y +V LP P SI + F++NRGL+ P +M FV + + I Sbjct: 133 IPPLLQILFWYFAVFLTLPGPRGSINIDDMFFISNRGLNMPGASMADGFWPFVVALAVAI 192 Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258 V + R + ++TG ++ L +P L ++ + ++ P L FNF+G Sbjct: 193 VAIVLMVRFANKRFDETGVPFHKFWVGLALFIAIPGLSVLLFGSPVSWEVPQLKGFNFVG 252 Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G + PE ++L +AL+ YTAAFIAEIVRSG+ +V GQ EAA +LGL R V++PQ Sbjct: 253 GWVLIPELLALTLALTIYTAAFIAEIVRSGIRSVSHGQTEAARSLGLREGPTLRKVIIPQ 312 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSL 377 A+R IIPPLTSQYLNL KNSSLA +G+ ++VS+ GT++NQTGQAIE+I I M +YL++ Sbjct: 313 ALRVIIPPLTSQYLNLAKNSSLAAGIGYPEMVSLFAGTVLNQTGQAIEVIAITMSVYLAI 372 Query: 378 SIMIALFMNRLNAKIALKEK 397 SI I+L MN N +IAL E+ Sbjct: 373 SISISLLMNWYNKRIALIER 392 >gi|149913100|ref|ZP_01901634.1| hypothetical protein RAZWK3B_03890 [Roseobacter sp. AzwK-3b] gi|149813506|gb|EDM73332.1| hypothetical protein RAZWK3B_03890 [Roseobacter sp. AzwK-3b] Length = 404 Score = 269 bits (688), Expect = 5e-70, Method: Compositional matrix adjust. Identities = 161/393 (40%), Positives = 232/393 (59%), Gaps = 8/393 (2%) Query: 13 FSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEI 72 F+ K + D R + + Q I +LL +F + +N+ N+ + L++ GFLSE AG++I Sbjct: 12 FTLSKLINDTRYRSYTFQFIALVLLIALFAYLGSNLAQNLRDAGLNISYGFLSEPAGYDI 71 Query: 73 DQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVY 132 +Q ++ Y S S++ A +VG +NT +AF G I ATIIG +VG RLS N L+ + VY Sbjct: 72 NQRLIEYDSQSTHLRASIVGVLNTLLVAFLGCILATIIGVVVGVLRLSQNWLIRKLMSVY 131 Query: 133 VEVFRNIPPLVVIFFLYKSVLSVLPIP------DHSIVLPFGMF-LNNRGLSFPTLTMDT 185 VE+FRN+P L+ I + +VLP P D + + F RG FP +T Sbjct: 132 VEIFRNVPVLIWILIIMAVFTAVLPQPRDFRGDDAEASMLWDAFAFTGRGFYFPKPVFET 191 Query: 186 NAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH 245 + I V +F+ I+ +R + G+ LP+ + S L F L+ + Sbjct: 192 GSTIVVLTFLASIIGIFVYRSYARKQLFQKGRLLPVFWPSVGLFFVPAVLMFFIAGRPIS 251 Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305 + P L FNF GG F+SL+ ALS YTAAFIAE VR+G++AV +GQ EAA +LGL Sbjct: 252 MEYPSLQGFNFQGGIYARNSFISLWFALSIYTAAFIAENVRAGILAVSKGQTEAAASLGL 311 Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV-SVGGTIINQTGQAI 364 + LV+LPQA+R IIPPL SQYLNL KNSSLA+AVG+ D+ ++GG +NQTG+AI Sbjct: 312 RPNRIMNLVILPQALRIIIPPLISQYLNLTKNSSLAIAVGYMDITGTLGGITLNQTGRAI 371 Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 E +L+ M YL++S+ I+ MN N + LKE+ Sbjct: 372 ETVLLLMLFYLAISLAISAVMNLYNNAVKLKER 404 >gi|313500473|gb|ADR61839.1| AapQ [Pseudomonas putida BIRD-1] Length = 392 Score = 269 bits (688), Expect = 5e-70, Method: Compositional matrix adjust. Identities = 161/380 (42%), Positives = 227/380 (59%), Gaps = 1/380 (0%) Query: 19 LYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVP 78 L D RV QI+ + + + + +N N++ ++ G FL AGF I Q ++P Sbjct: 13 LNDPRVRAWLFQILTIVFVIGLGWYLFHNTQTNLQHRGITSGFDFLDRSAGFGIAQHLIP 72 Query: 79 YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138 Y SYA ++G +NT + F G+I ATI+G ++G RLS N ++ + VYVE FRN Sbjct: 73 YVESDSYARVFVIGLLNTLLVTFIGVILATILGFIIGVARLSPNWMINKLATVYVETFRN 132 Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198 IPPL+ I F Y +V LP P SI + F++NRGL+ P +M FV + L I Sbjct: 133 IPPLLQILFWYFAVFLTLPGPRGSINIQDMFFISNRGLNMPGASMADGFWPFVVALALAI 192 Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258 R + +TG + L +P+L ++ + +D P L FNF+G Sbjct: 193 AAIAVMVRYANKRFNETGVPFHKFWAGLLLFIAIPSLSVLLFGSPVTWDMPQLKGFNFVG 252 Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G + PE ++L +AL+ YTAAFIAEIVRSG+ +V GQ EAA +LGL R V++PQ Sbjct: 253 GWVLIPELLALTLALTIYTAAFIAEIVRSGIRSVSHGQTEAARSLGLREGPTLRKVIIPQ 312 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSL 377 A+R IIPPLTSQYLNL KNSSLA +G+ ++VS+ GT++NQTGQAIE+I I M +YL++ Sbjct: 313 ALRVIIPPLTSQYLNLAKNSSLAAGIGYPEMVSLFAGTVLNQTGQAIEVIAITMSVYLAI 372 Query: 378 SIMIALFMNRLNAKIALKEK 397 SI I+L MN N +IAL E+ Sbjct: 373 SISISLLMNWYNKRIALIER 392 >gi|83854940|ref|ZP_00948470.1| glutamate/glutamine/aspartate/asparagine ABC transporter, permease protein [Sulfitobacter sp. NAS-14.1] gi|83842783|gb|EAP81950.1| glutamate/glutamine/aspartate/asparagine ABC transporter, permease protein [Sulfitobacter sp. NAS-14.1] Length = 401 Score = 269 bits (688), Expect = 6e-70, Method: Compositional matrix adjust. Identities = 159/389 (40%), Positives = 236/389 (60%), Gaps = 10/389 (2%) Query: 18 FLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIV 77 L D R + + Q I +LL + + N+ N+ ++ L++ GFL+ AG++I+Q ++ Sbjct: 14 LLNDTRYRSYTFQFIALILLIALMSFLGINLVRNLAEAGLNISYGFLNVPAGYDINQSLI 73 Query: 78 PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137 Y S SS A +VG +NT +AF I ATI+G + G RLS N LV+ + VYVE+FR Sbjct: 74 DYNSQSSNLRAAMVGIINTLLVAFLACITATILGVIAGVARLSKNWLVSKLMSVYVEIFR 133 Query: 138 NIPPLVVIFFLYKSVLSVLPIPDH-------SIVLPFGMFLNNRGLSFPTLTMDTNAKIF 190 NIP L+ I +Y + +VLP P+ S +L NRG+ P + I Sbjct: 134 NIPVLIWILMIYTLMTAVLPAPNKFRGDNATSSMLFDAFAFTNRGIYIPAPVWGPGSMIV 193 Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLI-ALKYQLHFDKP 249 V +FVL I+ ++ R + +TGK LP+ + T I +PT+V+ + + D P Sbjct: 194 VATFVLSIIAAIIYRRYAVSLLFRTGKLLPMGW-PTVAILLVPTIVMFFIMGSPIALDYP 252 Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309 L FNF GG + ++L++ALS YT AFIAE VR+G+ A+ +GQ EAA +LGL ++ Sbjct: 253 ELKGFNFRGGLQIGAPLIALWLALSVYTGAFIAENVRAGIQAISKGQTEAASSLGLRPKR 312 Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV-SVGGTIINQTGQAIEIIL 368 LV+LPQA+R IIPPL SQYLN+ KNSSLA+AVG+AD+ ++GG +NQTG+AIE +L Sbjct: 313 VMNLVVLPQALRVIIPPLISQYLNITKNSSLAIAVGYADITATLGGITLNQTGRAIECVL 372 Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKEK 397 + M YL++S+ I+ MN N ++LKE+ Sbjct: 373 LLMLFYLTISLSISAIMNVYNNSVSLKER 401 >gi|28898395|ref|NP_798000.1| amino acid ABC transporter permease [Vibrio parahaemolyticus RIMD 2210633] gi|260366019|ref|ZP_05778497.1| general L-amino acid transport system permease protein AapQ [Vibrio parahaemolyticus K5030] gi|260876626|ref|ZP_05888981.1| general L-amino acid transport system permease protein AapQ [Vibrio parahaemolyticus AN-5034] gi|260898002|ref|ZP_05906498.1| general L-amino acid transport system permease protein AapQ [Vibrio parahaemolyticus Peru-466] gi|28806612|dbj|BAC59884.1| amino acid ABC transporter, permease protein [Vibrio parahaemolyticus RIMD 2210633] gi|308088046|gb|EFO37741.1| general L-amino acid transport system permease protein AapQ [Vibrio parahaemolyticus Peru-466] gi|308094314|gb|EFO44009.1| general L-amino acid transport system permease protein AapQ [Vibrio parahaemolyticus AN-5034] gi|308114200|gb|EFO51740.1| general L-amino acid transport system permease protein AapQ [Vibrio parahaemolyticus K5030] Length = 401 Score = 269 bits (687), Expect = 6e-70, Method: Compositional matrix adjust. Identities = 165/372 (44%), Positives = 230/372 (61%), Gaps = 21/372 (5%) Query: 37 LTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNT 96 L F +NN NN++ ++ G GFL++ AGF I ++ Y SY +VG +NT Sbjct: 40 LVFFFYTIINNALNNLDARGIATGFGFLNQEAGFGIGLTLIEYNETYSYGRTFIVGLLNT 99 Query: 97 FWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVL 156 ++ G+I AT IG +G RLS N LV+ + VY+E FRNIP L+ IFF Y +VL L Sbjct: 100 ALVSVLGIILATAIGFTMGVARLSTNWLVSRLAAVYIETFRNIPLLLQIFFWYFAVLQAL 159 Query: 157 PIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTG 216 P S+ L +FLN RGL FP + + + + +F +G++ ++ + +R+ TG Sbjct: 160 PSARQSLSLGEAIFLNVRGLYFPAPVFNEGSGVVIAAFAIGLIATISISIWARNKQRLTG 219 Query: 217 KALPLLYIST----------FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF 266 + P+ I + + G+P I+L+Y P L FNF GG ++ PE Sbjct: 220 QQTPMGRIGLGLLVGLPLLVYFVSGMP----ISLEY------PELKGFNFKGGISIIPEL 269 Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326 +L +ALS YTAAFIAEIVRSG+ AV GQ EAA++LGL K +LV++PQA+R IIPP Sbjct: 270 AALLLALSVYTAAFIAEIVRSGINAVSHGQTEAAMSLGLPRAKTLKLVVIPQALRIIIPP 329 Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 LTSQYLNL KNSSLA+A+G+ DLVSV GT +NQTGQAIEII + M +YL+LS++ + M Sbjct: 330 LTSQYLNLTKNSSLAMAIGYPDLVSVFAGTTLNQTGQAIEIIAMTMGVYLTLSLLTSALM 389 Query: 386 NRLNAKIALKEK 397 N N K+AL E+ Sbjct: 390 NLYNRKVALVER 401 >gi|83941463|ref|ZP_00953925.1| glutamate/glutamine/aspartate/asparagine ABC transporter, permease protein [Sulfitobacter sp. EE-36] gi|83847283|gb|EAP85158.1| glutamate/glutamine/aspartate/asparagine ABC transporter, permease protein [Sulfitobacter sp. EE-36] Length = 404 Score = 268 bits (686), Expect = 9e-70, Method: Compositional matrix adjust. Identities = 158/389 (40%), Positives = 236/389 (60%), Gaps = 10/389 (2%) Query: 18 FLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIV 77 L D R + + Q I +LL + + N+ N+ ++ L++ GFL+ AG++I+Q ++ Sbjct: 17 LLNDTRYRSYTFQFIALILLIALMSFLGINLVRNLAEAGLNISYGFLNVPAGYDINQSLI 76 Query: 78 PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137 Y S SS A +VG +NT +AF + ATI+G + G RLS N LV+ + VYVE+FR Sbjct: 77 DYNSQSSNLRAAMVGIINTLLVAFLACVTATILGVIAGVARLSKNWLVSKLMSVYVEIFR 136 Query: 138 NIPPLVVIFFLYKSVLSVLPIPDH-------SIVLPFGMFLNNRGLSFPTLTMDTNAKIF 190 NIP L+ I +Y + +VLP P+ S +L NRG+ P + I Sbjct: 137 NIPVLIWILMIYTLMTAVLPAPNKFRGDNATSSMLFDAFAFTNRGIYIPEPVWGPGSMIV 196 Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLI-ALKYQLHFDKP 249 V +FVL I+ ++ R + +TGK LP+ + T I +PT+V+ + + D P Sbjct: 197 VATFVLSIIAAIIYRRYAVSLLFRTGKLLPMGW-PTVAILLVPTIVMFFIMGSPIALDYP 255 Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309 L FNF GG + ++L++ALS YT AFIAE VR+G+ A+ +GQ EAA +LGL ++ Sbjct: 256 ELKGFNFRGGLQIGAPLIALWLALSVYTGAFIAENVRAGIQAISKGQTEAASSLGLRPKR 315 Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV-SVGGTIINQTGQAIEIIL 368 LV+LPQA+R IIPPL SQYLN+ KNSSLA+AVG+AD+ ++GG +NQTG+AIE +L Sbjct: 316 VMNLVVLPQALRVIIPPLISQYLNITKNSSLAIAVGYADITATLGGITLNQTGRAIECVL 375 Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKEK 397 + M YL++S+ I+ MN N ++LKE+ Sbjct: 376 LLMLFYLTISLSISAIMNVYNNSVSLKER 404 >gi|167035542|ref|YP_001670773.1| polar amino acid ABC transporter inner membrane subunit [Pseudomonas putida GB-1] gi|166862030|gb|ABZ00438.1| polar amino acid ABC transporter, inner membrane subunit [Pseudomonas putida GB-1] Length = 392 Score = 268 bits (686), Expect = 9e-70, Method: Compositional matrix adjust. Identities = 159/380 (41%), Positives = 229/380 (60%), Gaps = 1/380 (0%) Query: 19 LYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVP 78 L D RV QI+ + + + + +N N++ ++ G FL AGF I Q ++P Sbjct: 13 LNDPRVRAWLFQILTIVFVVGLGWYLFHNTQTNLQHRGITSGFDFLDRSAGFGIAQHLIP 72 Query: 79 YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138 Y SYA ++G +NT + F G+I ATI+G ++G RLS N ++ + VYVE FRN Sbjct: 73 YVESDSYARVFVIGLLNTLLVTFIGVILATILGFIIGVARLSPNWMINKLATVYVETFRN 132 Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198 IPPL+ I F Y +V LP P SI + F++NRGL+ P +M F + V+ I Sbjct: 133 IPPLLQILFWYFAVFLTLPGPRGSINIDDMFFISNRGLNMPGASMADGFWPFAVAVVVAI 192 Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258 R++ ++TG + L+ +P L ++ + ++ P L FNF+G Sbjct: 193 AAIAVMVRMANKRFDETGVPFHKFWAGLALLIAIPGLSVLLFGSPVTWEVPQLKGFNFVG 252 Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G + PE ++L +AL+ YTAAFIAEIVRSG+ +V GQ EAA +LGL R V++PQ Sbjct: 253 GWVLIPELLALTLALTIYTAAFIAEIVRSGIRSVSHGQTEAARSLGLREGPTLRKVIIPQ 312 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSL 377 A+R IIPPLTSQYLNL KNSSLA +G+ ++VS+ GT++NQTGQAIE+I I M +YL++ Sbjct: 313 ALRVIIPPLTSQYLNLAKNSSLAAGIGYPEMVSLFAGTVLNQTGQAIEVIAITMSVYLAI 372 Query: 378 SIMIALFMNRLNAKIALKEK 397 SI I+L MN N +IAL E+ Sbjct: 373 SISISLLMNWYNKRIALIER 392 >gi|163793103|ref|ZP_02187079.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [alpha proteobacterium BAL199] gi|159181749|gb|EDP66261.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [alpha proteobacterium BAL199] Length = 399 Score = 268 bits (684), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 154/396 (38%), Positives = 238/396 (60%), Gaps = 3/396 (0%) Query: 3 KNARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIG 62 K + +R S ++L+D RV ++ Q I+A+++ + + N N++ +S G Sbjct: 6 KGSPHRASRSLS--EWLHDERVRSVLYQAIVAIVVIAVARYLFINTSENLQARGMSAGFD 63 Query: 63 FLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN 122 FLS AGF I ++PYT+ SY LVG NT +AF +I T++G LVG RLS N Sbjct: 64 FLSTGAGFSIAWSVLPYTAGDSYFHVYLVGIGNTLMVAFVAIICTTLLGFLVGIMRLSKN 123 Query: 123 KLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLT 182 L+A + YVE+ RN P L+ I F + +V S+LP P+ S+ L +LNNRGL P Sbjct: 124 WLIAQVASWYVEILRNTPLLLQILFWFLAVFSLLPRPNKSLSLLDLFYLNNRGLYIPAPV 183 Query: 183 MDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY 242 I + + ++ + + +R H TG+ P + ++FGLP LV + Sbjct: 184 PGDGFNITLIAVLVAVGATYAQAVWARKRHFDTGQRFPAFWTGLGILFGLPLLVFLVTGA 243 Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302 L FD P L FNF+GG++V P F +L +AL Y +A++AE VR+G+++V GQ EAA + Sbjct: 244 PLTFDYPALKGFNFLGGASVPPAFCALLLALVIYHSAYMAEAVRAGIMSVSHGQTEAAYS 303 Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTG 361 LGL RLV++PQAMR+++PP+ S ++N++KNSSLA+A+G+ DLV+V T +NQ+G Sbjct: 304 LGLRPGMTLRLVIIPQAMRAVVPPMISNWMNVVKNSSLAIAIGYPDLVAVYMQTSLNQSG 363 Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 AIEI+ + M Y+S+S+ I++ +N N + LKE+ Sbjct: 364 HAIEIVAMVMLFYMSVSLSISMALNYYNKIVQLKER 399 >gi|261210914|ref|ZP_05925204.1| amino acid ABC transporter permease protein [Vibrio sp. RC341] gi|260839889|gb|EEX66489.1| amino acid ABC transporter permease protein [Vibrio sp. RC341] Length = 433 Score = 267 bits (683), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 170/398 (42%), Positives = 239/398 (60%), Gaps = 4/398 (1%) Query: 3 KNARKTVTRYFSR-MKFLYDMRVHNISVQIILALLLTVIFLWC-VNNVYNNMEKSNLSLG 60 NA +++ S+ LY+ + + Q I A+ V FL+ VNN N+E ++ G Sbjct: 37 NNAASSLSDAHSKHTNLLYNPTFRSAAFQFI-AVCALVFFLYTIVNNALTNLESRGIATG 95 Query: 61 IGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLS 120 FL + AGF I Q +V Y SY +VG +NT ++ G+I AT++G ++G RLS Sbjct: 96 FAFLDQPAGFGISQSLVEYDETYSYGRTFIVGLLNTALVSLLGIILATLLGFVLGIARLS 155 Query: 121 ANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPT 180 +N L++ + VY+E FRNIP L+ IFF Y VL LP S+ + ++LN +GL Sbjct: 156 SNWLISRLAAVYIETFRNIPLLLQIFFWYFVVLQALPSAKQSMHVGEWLYLNVKGLYLVK 215 Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240 +T++ + + G + +R+ TG+ P+ + L P LV L Sbjct: 216 PIFETSSMWVFVALLAGAAACWVLSIWARNRQRLTGQQTPMGRYAILLCVAFPVLVYYLL 275 Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300 + + PVL FNF GG TV PE +L +AL+ YTA+FIAEIVRSG+ AV GQ EAA Sbjct: 276 GQPITAEYPVLRGFNFQGGITVLPELAALLVALTIYTASFIAEIVRSGINAVSHGQTEAA 335 Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQ 359 ++LGL K +LV++PQA+R IIPPLTSQYLNL KNSSLA+A+G+ DLVSV GT +NQ Sbjct: 336 MSLGLPRSKTLKLVIIPQALRIIIPPLTSQYLNLTKNSSLAMAIGYPDLVSVFAGTTLNQ 395 Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 TGQAIEII + M +YLSLS++ + MN N K+AL E+ Sbjct: 396 TGQAIEIISMTMLVYLSLSLLTSALMNLYNRKVALVER 433 >gi|237730187|ref|ZP_04560668.1| amino acid ABC transporter permease [Citrobacter sp. 30_2] gi|226908793|gb|EEH94711.1| amino acid ABC transporter permease [Citrobacter sp. 30_2] Length = 393 Score = 267 bits (682), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 159/369 (43%), Positives = 227/369 (61%), Gaps = 1/369 (0%) Query: 30 QIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAI 89 QI+ + + I ++ ++N NN+ S ++ G FL AGF I Q ++ Y +Y Sbjct: 25 QILAVIAVISIAVYLIHNTINNLNNSGITSGFSFLDRSAGFGIVQHLIDYEQGDTYGRVF 84 Query: 90 LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 +VG +NT ++ ++ A+I+G +G RLS N L+ + +Y+E FRNIPPL+ IFF Y Sbjct: 85 VVGLLNTLLVSALCIVFASILGFFLGLARLSDNWLLRKLSTIYIETFRNIPPLLQIFFWY 144 Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209 +VL LP P ++ MFL+NRGL P M F + V+ +V+++ R +R Sbjct: 145 FAVLRNLPGPRQAVNALDLMFLSNRGLYIPAPQMGEGFFAFCTAVVIALVVTIGLFRFNR 204 Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269 KTG+ + LI LP + LH+D P L FNF GG + PE +L Sbjct: 205 MHQTKTGQLRRTWPTALALIVLLPVISQWMFGAALHWDIPALRGFNFRGGMVLIPELAAL 264 Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329 +ALS YT+AFIAEI+R+G+ AVP GQ EAA +LGL + R V++PQA+R IIPPLTS Sbjct: 265 TLALSVYTSAFIAEIIRAGIQAVPYGQHEAARSLGLPNPVTLRQVIIPQALRVIIPPLTS 324 Query: 330 QYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388 QYLN++KNSSLA A+G+ D+VS+ GT++NQTGQAIE I I M +YL +S+ I+L MN Sbjct: 325 QYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAITMSVYLIISLSISLLMNIY 384 Query: 389 NAKIALKEK 397 N +IAL E+ Sbjct: 385 NRRIALIER 393 >gi|262165600|ref|ZP_06033337.1| amino acid ABC transporter permease protein [Vibrio mimicus VM223] gi|262025316|gb|EEY43984.1| amino acid ABC transporter permease protein [Vibrio mimicus VM223] Length = 401 Score = 267 bits (682), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 171/400 (42%), Positives = 232/400 (58%), Gaps = 9/400 (2%) Query: 3 KNARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIG 62 A + + LY+ Q + L+ VNN NN+E ++ G Sbjct: 6 HTASQHADAHSKHANLLYNPTFRAAVFQFLAVCALSFFLYTIVNNALNNLESRGIATGFA 65 Query: 63 FLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN 122 FL AGF I Q +V Y SY LVG +NT ++ G+I AT++G ++G RLS N Sbjct: 66 FLDHAAGFGISQSLVDYDETYSYGRTFLVGLLNTALVSVLGIIFATLLGFVLGIARLSRN 125 Query: 123 KLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLT 182 L++ + VY+E FRNIP L+ IFF Y VL LP S+ L ++LN +GL Sbjct: 126 WLISRLAAVYIETFRNIPLLLQIFFWYFVVLQALPSAKQSMHLGEWLYLNVKGLYLVKPV 185 Query: 183 MDTNAKIFVFSFVLGI----VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLI 238 + + + + + GI VLS++A R TG+ P+ G P LV Sbjct: 186 FEAGSLWVLIALLAGIAFCWVLSIWANNRQR----LTGQQTPMGRYVLICCVGFPLLVYF 241 Query: 239 ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQME 298 AL + + PVL FNF GG T+ PE +L +AL+ YTA+FIAEIVRSG+ AV GQ E Sbjct: 242 ALGQPISAEYPVLRGFNFQGGLTILPELAALLVALTIYTASFIAEIVRSGINAVSHGQTE 301 Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTII 357 AA++LGL+ K +LV++PQA+R IIPPLTSQYLNL KNSSLA+A+G+ DLVSV GT + Sbjct: 302 AAMSLGLSRAKTLKLVIIPQALRIIIPPLTSQYLNLTKNSSLAMAIGYPDLVSVFAGTTL 361 Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 NQTGQAIEII + M +YLSLS++ + MN N K+AL E+ Sbjct: 362 NQTGQAIEIISMTMLVYLSLSLLTSALMNLYNRKVALVER 401 >gi|260901585|ref|ZP_05909980.1| general L-amino acid transport system permease protein AapQ [Vibrio parahaemolyticus AQ4037] gi|308108542|gb|EFO46082.1| general L-amino acid transport system permease protein AapQ [Vibrio parahaemolyticus AQ4037] Length = 401 Score = 267 bits (682), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 164/372 (44%), Positives = 229/372 (61%), Gaps = 21/372 (5%) Query: 37 LTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNT 96 L F +NN NN++ ++ G GFL++ AGF I ++ Y SY +VG +NT Sbjct: 40 LVFFFYTIINNALNNLDARGIATGFGFLNQEAGFGIGLTLIEYNETYSYGRTFIVGLLNT 99 Query: 97 FWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVL 156 ++ G+I T IG +G RLS N LV+ + VY+E FRNIP L+ IFF Y +VL L Sbjct: 100 ALVSVLGIILTTAIGFTMGVARLSTNWLVSRLAAVYIETFRNIPLLLQIFFWYFAVLQAL 159 Query: 157 PIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTG 216 P S+ L +FLN RGL FP + + + + +F +G++ ++ + +R+ TG Sbjct: 160 PSARQSLSLGEAIFLNVRGLYFPAPVFNEGSGVVIAAFAIGLIATISISIWARNKQRLTG 219 Query: 217 KALPLLYIST----------FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF 266 + P+ I + + G+P I+L+Y P L FNF GG ++ PE Sbjct: 220 QQTPMGRIGLGLLVGLPLLVYFVSGMP----ISLEY------PELKGFNFKGGISIIPEL 269 Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326 +L +ALS YTAAFIAEIVRSG+ AV GQ EAA++LGL K +LV++PQA+R IIPP Sbjct: 270 AALLLALSVYTAAFIAEIVRSGINAVSHGQTEAAMSLGLPRAKTLKLVVIPQALRIIIPP 329 Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 LTSQYLNL KNSSLA+A+G+ DLVSV GT +NQTGQAIEII + M +YL+LS++ + M Sbjct: 330 LTSQYLNLTKNSSLAMAIGYPDLVSVFAGTTLNQTGQAIEIIAMTMGVYLTLSLLTSALM 389 Query: 386 NRLNAKIALKEK 397 N N K+AL E+ Sbjct: 390 NLYNRKVALVER 401 >gi|182678576|ref|YP_001832722.1| binding-protein-dependent transport systems inner membrane component [Beijerinckia indica subsp. indica ATCC 9039] gi|182634459|gb|ACB95233.1| binding-protein-dependent transport systems inner membrane component [Beijerinckia indica subsp. indica ATCC 9039] Length = 391 Score = 267 bits (682), Expect = 3e-69, Method: Compositional matrix adjust. Identities = 163/381 (42%), Positives = 230/381 (60%), Gaps = 13/381 (3%) Query: 21 DMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYT 80 D R VQ + L L ++ + ++ NM + F ++ AGF+I+Q + Y+ Sbjct: 20 DPRKRGFIVQALFVLALCLVLVGMFTTLHANMVARGIPTDFSFWNQTAGFDINQTPIAYS 79 Query: 81 SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140 S+Y A LVG +NT +A G++ TIIG +VG RLS N+LV+++ YVE RNIP Sbjct: 80 PLSTYGRAFLVGLINTLIVASIGLVCTTIIGVIVGISRLSKNRLVSFLAATYVETLRNIP 139 Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200 L+ + F Y ++L LP P S++ PFG LNNRGL P ++ A + LG+ Sbjct: 140 LLLQLLFWYNAILKPLPGPRQSLLFPFGTVLNNRGLFLPLPSLLPGAAWVGAALALGLAA 199 Query: 201 SLFATRLSRHFHEKTGKALPLLYISTFLIFGL---PTLVLIALKYQLHFDKPVLGQFNFI 257 S R G AL + T L L P ++ L L FD+P+L FN+ Sbjct: 200 SFLVGR---------GTALKPGWPKTLLCLVLALGPAIIAAMLAPPLAFDRPILKGFNYT 250 Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317 GG V PE ++L + LS YTAAFIAEI+R+G++AVPRGQ EAA ALGL R ++LP Sbjct: 251 GGFRVLPELVALLLGLSLYTAAFIAEIIRAGIMAVPRGQSEAAEALGLPSGLTMRRIILP 310 Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLS 376 QA+R +IPPLTSQYLNL+KNSSLAV +G+ DLV V GT++NQTG A++II I M +YL+ Sbjct: 311 QALRVVIPPLTSQYLNLIKNSSLAVFIGYPDLVQVFAGTVLNQTGAAVQIIFITMAVYLA 370 Query: 377 LSIMIALFMNRLNAKIALKEK 397 +S++ + MN +N ++AL E+ Sbjct: 371 VSLVTSFAMNLINRRMALVER 391 >gi|242241100|ref|YP_002989281.1| polar amino acid ABC transporter inner membrane subunit [Dickeya dadantii Ech703] gi|242133157|gb|ACS87459.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya dadantii Ech703] Length = 392 Score = 266 bits (681), Expect = 3e-69, Method: Compositional matrix adjust. Identities = 159/372 (42%), Positives = 231/372 (62%), Gaps = 7/372 (1%) Query: 30 QIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAI 89 QIIL + + + V+N N+ + ++ G FL+ AGF I Q ++ Y +YA Sbjct: 24 QIILVIAVLAFAGYLVSNTVTNLAQRGITSGFAFLNNSAGFGIIQHLIDYQQGDTYARVF 83 Query: 90 LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 +VG +NT ++ ++ A+++G +VG RLS N L+ + Y+E FRNIPPL+ IFF Y Sbjct: 84 VVGLLNTLLVSAICIVCASLLGFVVGLARLSDNWLLRKLSTFYIETFRNIPPLLQIFFWY 143 Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209 +VL LP P ++ FL+NRGL P+ + + A V S V +++++ +R S+ Sbjct: 144 FAVLRNLPGPRQAVNALDTFFLSNRGLYIPSAELGSGALSAVLSLVATLMVAILISRRSK 203 Query: 210 HFHEKTG---KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF 266 + TG K P+ ++ GL LV LH+D P L FNF GG + PE Sbjct: 204 RYQALTGQQRKTWPIPLTMLIVLMGLSHLVF---GPALHWDVPELKGFNFRGGMVLIPEL 260 Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326 +L +ALS YT++FIAEI+RSG+ +V GQ EAA++LGL + V+LPQA+R IIPP Sbjct: 261 AALALALSIYTSSFIAEIIRSGIQSVSHGQHEAALSLGLPKSVTLKKVILPQALRVIIPP 320 Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 LTSQYLN++KNSSLA A+G+ D+VS+ GT++NQTGQAIE I I M +YL +S++I+L M Sbjct: 321 LTSQYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAITMSVYLIISLLISLVM 380 Query: 386 NRLNAKIALKEK 397 N N KIAL E+ Sbjct: 381 NVYNRKIALIER 392 >gi|89901103|ref|YP_523574.1| amino acid ABC transporter permease [Rhodoferax ferrireducens T118] gi|89345840|gb|ABD70043.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Rhodoferax ferrireducens T118] Length = 391 Score = 266 bits (681), Expect = 3e-69, Method: Compositional matrix adjust. Identities = 148/368 (40%), Positives = 223/368 (60%), Gaps = 4/368 (1%) Query: 32 ILALLLTVIFLW-CVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAIL 90 ++A+L F+W +N NM + G FL + AGF+I + + P+ S Y A L Sbjct: 26 VIAILAIGGFVWFLAHNTLLNMRVRGIQSGFDFLKQAAGFDIGESLYPFDSAQPYWQAFL 85 Query: 91 VGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYK 150 VG NT +A G+I AT++GTL+G GR S N LV +C+VYVE+FRNIP L+ + Y Sbjct: 86 VGVTNTLRVAVLGIILATVLGTLLGVGRFSRNALVRGLCQVYVELFRNIPVLLQLLLWYV 145 Query: 151 SVLSVLPIPDHSIVLPFG-MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209 + VLP + V FG FL+ GL++P + + G+VL+ R ++ Sbjct: 146 ILTEVLPAASDAWV--FGSFFLSKGGLNYPIPVWSIGQLWAAYGLIPGLVLAWVYRRWAK 203 Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269 E TG+ ++++ ++ L + ++P G F+ G ++PEF+++ Sbjct: 204 RQFEATGRVRSMVWMPLVIVLAASLLGWLLGGAPTALNRPFKGDFSIENGGALTPEFLAV 263 Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329 + L+ YTA+FIAE+VR G+ +V GQ EAA ALGL+ ++ RLV+LPQA+R IIPPLT+ Sbjct: 264 LLGLTLYTASFIAEVVRGGIQSVALGQSEAAAALGLSRQQEMRLVMLPQALRVIIPPLTN 323 Query: 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 QYLNL KNSSLAVA+G+ D+VS+ T +NQTG+A+E I + M +YLS S+ A+ MN N Sbjct: 324 QYLNLTKNSSLAVAIGYPDVVSIANTALNQTGRAVECISLVMLVYLSTSLGTAVLMNWYN 383 Query: 390 AKIALKEK 397 ++ A+KE+ Sbjct: 384 SRSAIKER 391 >gi|258621542|ref|ZP_05716575.1| amino acid ABC transporter, permease protein [Vibrio mimicus VM573] gi|258586160|gb|EEW10876.1| amino acid ABC transporter, permease protein [Vibrio mimicus VM573] Length = 401 Score = 266 bits (680), Expect = 4e-69, Method: Compositional matrix adjust. Identities = 172/398 (43%), Positives = 231/398 (58%), Gaps = 9/398 (2%) Query: 5 ARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFL 64 A + + LY+ Q + L+ VNN NN+E ++ G FL Sbjct: 8 ASQHADAHSKHANLLYNPTFRAAVFQFLAVCALSFFLYTIVNNALNNLESRGIATGFAFL 67 Query: 65 SERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKL 124 AGF I Q +V Y SY LVG +NT ++ G+I AT++G ++G RLS N L Sbjct: 68 DHAAGFGISQSLVDYDETYSYGRTFLVGLLNTALVSVLGIIFATLLGFVLGIARLSRNWL 127 Query: 125 VAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMD 184 ++ + VY+E FRNIP L+ IFF Y VL LP S+ L ++LN +GL + Sbjct: 128 ISRLAAVYIETFRNIPLLLQIFFWYFVVLQALPSAKQSMHLGEWLYLNVKGLYLVKPVFE 187 Query: 185 TNAKIFVFSFVLGI----VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240 + + + + GI VLS++A R TG+ P+ G P LV AL Sbjct: 188 AGSLWVLIALLAGIAFCWVLSIWANNRQR----LTGQQTPMGRYVLICCVGFPLLVYFAL 243 Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300 + + PVL FNF GG TV PE +L +AL+ YTA+FIAEIVRSG+ AV GQ EAA Sbjct: 244 GQPISAEYPVLRGFNFQGGLTVLPELAALLVALTIYTASFIAEIVRSGINAVSHGQTEAA 303 Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQ 359 ++LGL K +LV++PQA+R IIPPLTSQYLNL KNSSLA+A+G+ DLVSV GT +NQ Sbjct: 304 MSLGLPRAKTLKLVIIPQALRIIIPPLTSQYLNLTKNSSLAMAIGYPDLVSVFAGTTLNQ 363 Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 TGQAIEII + M +YLSLS++ + MN N K+AL E+ Sbjct: 364 TGQAIEIISMTMLVYLSLSLLTSALMNLYNRKVALVER 401 >gi|71083647|ref|YP_266367.1| amino acid ABC transporter [Candidatus Pelagibacter ubique HTCC1062] gi|71062760|gb|AAZ21763.1| amino acid ABC transporter [Candidatus Pelagibacter ubique HTCC1062] Length = 381 Score = 266 bits (680), Expect = 5e-69, Method: Compositional matrix adjust. Identities = 160/382 (41%), Positives = 231/382 (60%), Gaps = 7/382 (1%) Query: 22 MRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTS 81 M++ I Q++ L + +IF + N NM+ + G GFL++ A F+I ++ Y Sbjct: 1 MKLKKILPQLLTLLFIVLIFGFFTMNAQENMDTRGIEFGFGFLTQEASFDIQFSLIDYDG 60 Query: 82 DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141 SYA A LVG +NT +AF G+I AT++G +VG RLS N L+ Y+E FRN+P Sbjct: 61 SHSYARAYLVGLLNTLLVAFIGIILATLLGLIVGVARLSPNYLIRKTASFYIEFFRNVPL 120 Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201 L+ IFF Y + L LP+P + +L F+ +GL P + TN IF + ++ ++L Sbjct: 121 LLQIFFWYFAALRALPMPQDATLLLGSSFMTIKGLYTPA-PIWTNFDIFFTTLIVAMILI 179 Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL-----GQFNF 256 F + ++ E+ GK LP+L IS + GLP L + L F P L + F Sbjct: 180 FFFVKFAKKKQEQEGKQLPVLIISLAIFIGLPLLTFLVGGVDLSFSFPELRKMSQSSYTF 239 Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316 GG + PE ++L +AL+ YTA FIAE VR+G+ + +GQ EAA ++GLT + +LV++ Sbjct: 240 DGGMGIPPELIALTLALTLYTATFIAENVRAGIQGIGKGQKEAAASIGLTPSQVLKLVIM 299 Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYL 375 PQA+R IIPP T+QYLNL KNSSLA A+ + DLV V GT + QTG+AIEI+ I M YL Sbjct: 300 PQALRIIIPPTTNQYLNLTKNSSLAAAIAYPDLVLVFAGTAMMQTGKAIEIVGITMATYL 359 Query: 376 SLSIMIALFMNRLNAKIALKEK 397 ++SI I+L MN N +IA+KEK Sbjct: 360 TISIAISLLMNWYNQRIAIKEK 381 >gi|262277477|ref|ZP_06055270.1| general L-amino acid transport system permease protein AapQ [alpha proteobacterium HIMB114] gi|262224580|gb|EEY75039.1| general L-amino acid transport system permease protein AapQ [alpha proteobacterium HIMB114] Length = 398 Score = 266 bits (679), Expect = 6e-69, Method: Compositional matrix adjust. Identities = 162/401 (40%), Positives = 239/401 (59%), Gaps = 11/401 (2%) Query: 2 IKNARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGI 61 +KN + + +Y S R+ + Q +L L +I + N N+E + G Sbjct: 4 LKNKVERIDQYLSDHP-----RIKFVLPQALLFAFLILIVGYFSFNASTNLEARGIDTGF 58 Query: 62 GFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSA 121 FL+++A F+I ++ + S +Y A LVG +NT ++ G++ ATI+G + G RLS+ Sbjct: 59 SFLNKKASFDIQFSLIEFDSSMTYGRAYLVGLLNTILVSVIGILFATILGFIFGILRLSS 118 Query: 122 NKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTL 181 N L + + Y+E FRNI L+ IFF Y +VL LP ++SIVL ++ N +G+ FP Sbjct: 119 NPLASGLATSYIEFFRNISLLLQIFFWYFTVLRFLPQTENSIVLFDSIYANIKGVYFPKF 178 Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALK 241 TN ++ + V F +R E TGK LP IS ++ LPTLV+ Sbjct: 179 VW-TNLSFLIYGLIFTFVSIYFFNIYARKLRENTGKILPQFLISLGILIILPTLVVFIFG 237 Query: 242 YQLHFDKPVL----GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQM 297 + F P L G N+IGGS++ PEF++L ALS YT+ FIAE VR+G++ + +GQ Sbjct: 238 VGVEFSHPKLEIKMGIANYIGGSSIIPEFLALAFALSIYTSTFIAENVRAGILGIDKGQK 297 Query: 298 EAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTI 356 EAA ++GLT+ + RLV++PQA+R IIPP T+QYLNL KNSSLA A+ + D+V V GT Sbjct: 298 EAAASIGLTNAQVLRLVVIPQALRIIIPPTTNQYLNLTKNSSLAAAIAYPDIVLVFAGTA 357 Query: 357 INQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 + QTG+AIEI+ I M YL+LSI I++FMN N K++L E+ Sbjct: 358 LMQTGRAIEIVTITMLTYLTLSISISIFMNWYNKKVSLTER 398 >gi|299133836|ref|ZP_07027030.1| polar amino acid ABC transporter, inner membrane subunit [Afipia sp. 1NLS2] gi|298591672|gb|EFI51873.1| polar amino acid ABC transporter, inner membrane subunit [Afipia sp. 1NLS2] Length = 401 Score = 265 bits (677), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 164/364 (45%), Positives = 229/364 (62%), Gaps = 3/364 (0%) Query: 25 HNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSS 84 I+ Q+ A LL + V N +N+ +++ G GFLS AGF ++Q ++ Y+ + Sbjct: 27 KGIAGQLAFAGLLAWLAFDIVTNAQDNLRAQHIASGFGFLSGTAGFSVNQALIRYSEADT 86 Query: 85 YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144 Y VG +NT ++ G++ AT+IG V GRLS N L+A + YVE+ RN+P L Sbjct: 87 YLRVFEVGLLNTLLVSIIGIVFATLIGFAVALGRLSPNWLLARLSGGYVEIIRNLPLLFQ 146 Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGM-FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLF 203 + F Y +VL+ LP P S+ + FG+ FLNNRG P + + A +F + + I SL Sbjct: 147 LLFWYLAVLAALPNPRQSLSI-FGVAFLNNRGFVVPHVVPEQGAGVFAVAILAAIAASLL 205 Query: 204 ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVS 263 T +R + G L + + L+ GLP L + FD PVL FNF GG+ V+ Sbjct: 206 MTVYARRRLYRFGDRLRVWPFALALLVGLPLLSIALFGAPASFDLPVLRGFNFAGGTRVT 265 Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 PEF++L IALS YTAAFIAEIVR GL+AVP+GQMEA +LGL+ RLV++PQAMR I Sbjct: 266 PEFVALTIALSTYTAAFIAEIVRGGLLAVPKGQMEAGASLGLSRPAILRLVIIPQAMRLI 325 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIA 382 +PPLT+QYLNL KNSSLAVA+G+ DL SV GT ++QTGQA+EII + M +YL++S++ + Sbjct: 326 LPPLTNQYLNLTKNSSLAVAIGYPDLFSVFAGTTLSQTGQAVEIIAMTMAVYLAISLITS 385 Query: 383 LFMN 386 MN Sbjct: 386 ALMN 389 >gi|91977031|ref|YP_569690.1| amino acid ABC transporter permease [Rhodopseudomonas palustris BisB5] gi|91683487|gb|ABE39789.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Rhodopseudomonas palustris BisB5] Length = 401 Score = 265 bits (676), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 160/395 (40%), Positives = 238/395 (60%), Gaps = 3/395 (0%) Query: 1 MIKNARKTVTRYFSRMKFLYDMRV--HNISVQIILALLLTVIFLWCVNNVYNNMEKSNLS 58 M AR ++ ++++ R + Q++ L I V+N +N+ ++ Sbjct: 1 MAIEARPPPAQFGAKLRRALGGRSGWKGLVAQLLFVATLCWIGYAIVDNARDNLANQRIA 60 Query: 59 LGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGR 118 G GF+S+ AGF + Q ++PY+ SY LVG NT ++ G+ AT+IG LV GR Sbjct: 61 SGFGFMSQTAGFGVSQTLIPYSESDSYTRVFLVGLANTLMVSVIGIFFATLIGFLVALGR 120 Query: 119 LSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSF 178 LS N L++ I YVE+ RN+P L I F Y +VL LP P S+ L FL+NRG+ Sbjct: 121 LSPNWLISRIAGGYVELIRNLPLLFQILFWYLAVLGALPGPRQSVTLFDSFFLSNRGIVV 180 Query: 179 PTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLI 238 P + F+ + ++ ++ ++ +R +TGK + + S L+ GLP + + Sbjct: 181 PRPVGEAGLDGFLVALLIAVIGAIVLPIYARRRLFQTGKPMIVWPWSLGLLIGLPLIAAL 240 Query: 239 ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQME 298 F+ PVL FNF GGS ++PEF++L +ALS YTAAFIAEIVR+G+++V +GQME Sbjct: 241 IFGKPFGFEIPVLKGFNFAGGSRLAPEFVALTLALSTYTAAFIAEIVRAGILSVHKGQME 300 Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTII 357 A +LGL+ RLV++PQAMR I+PPLT+QYLNL KNSSLAVA+G+ DL SV GT + Sbjct: 301 AGASLGLSRGATLRLVVIPQAMRVILPPLTNQYLNLTKNSSLAVAIGYPDLFSVFAGTTL 360 Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 +QTGQAIE+I I M +YL +S++ + M+ + +I Sbjct: 361 SQTGQAIEVISITMGVYLLISLITSALMSLYSWRI 395 >gi|91763313|ref|ZP_01265277.1| amino acid ABC transporter [Candidatus Pelagibacter ubique HTCC1002] gi|91717726|gb|EAS84377.1| amino acid ABC transporter [Candidatus Pelagibacter ubique HTCC1002] Length = 381 Score = 265 bits (676), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 159/382 (41%), Positives = 230/382 (60%), Gaps = 7/382 (1%) Query: 22 MRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTS 81 M++ I Q++ L + +IF + N NM+ + G GFL++ A F+I ++ Y Sbjct: 1 MKLKKILPQLLTLLFIVLIFGFFTMNAQENMDTRGIQFGFGFLTQEASFDIQFSLIDYDG 60 Query: 82 DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141 SYA A LVG +NT +AF G+I AT++G +VG RLS N L+ Y+E FRN+P Sbjct: 61 SHSYARAYLVGLLNTLLVAFIGIILATLLGLIVGVARLSPNYLIRKTASFYIEFFRNVPL 120 Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201 L+ IFF Y + L LP+P + +L F+ +GL P + TN IF + + ++L Sbjct: 121 LLQIFFWYFAALRALPMPQDATLLLGSSFMTIKGLYTPA-PIWTNFDIFFTTLIAAMILI 179 Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL-----GQFNF 256 F + ++ E+ GK LP+L +S + GLP L + L F P L + F Sbjct: 180 FFFVKFAKKKQEQEGKQLPVLIVSLAIFIGLPLLTFLVGGVDLSFSFPELRKMSQSSYTF 239 Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316 GG + PE ++L +AL+ YTA FIAE VR+G+ + +GQ EAA ++GLT + +LV++ Sbjct: 240 DGGMGIPPELIALTLALTLYTATFIAENVRAGIQGIGKGQKEAAASIGLTPSQVLKLVIM 299 Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYL 375 PQA+R IIPP T+QYLNL KNSSLA A+ + DLV V GT + QTG+AIEI+ I M YL Sbjct: 300 PQALRIIIPPTTNQYLNLTKNSSLAAAIAYPDLVLVFAGTAMMQTGKAIEIVGITMATYL 359 Query: 376 SLSIMIALFMNRLNAKIALKEK 397 ++SI I+L MN N +IA+KEK Sbjct: 360 TISIAISLLMNWYNQRIAIKEK 381 >gi|148255315|ref|YP_001239900.1| putative amino acid transport protein, permease [Bradyrhizobium sp. BTAi1] gi|146407488|gb|ABQ35994.1| amino acid ABC transporter membrane protein 1, PAAT family [Bradyrhizobium sp. BTAi1] Length = 383 Score = 264 bits (675), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 154/361 (42%), Positives = 228/361 (63%), Gaps = 5/361 (1%) Query: 31 IILALLLTVIFLWC----VNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYA 86 +IL +L + +W V N +N+ ++ G GFL+ AGF+++Q ++ Y+ SY+ Sbjct: 11 VILQILFVAVLVWVGYEIVANARSNLAAQRITSGFGFLNNTAGFDVNQALISYSGSDSYS 70 Query: 87 TAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIF 146 +LVG +NT ++ G++ +TI+G LV GRLS N L++ + YVE+ RN+P L I Sbjct: 71 RVLLVGILNTLLVSVIGIVLSTILGFLVALGRLSPNVLLSRVSGAYVELIRNLPLLFQIL 130 Query: 147 FLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATR 206 F Y +VLS LP P SI L FLNNRG P + F+ + IV+SL Sbjct: 131 FWYLAVLSALPGPRQSISLFSTFFLNNRGFIVPRPIEEPGLTPFLIALGAAIVVSLGLRY 190 Query: 207 LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF 266 +R G A+ + L+ GLP + ++ + F+ PVL FNF GGS + PE Sbjct: 191 YARRELFVRGHAMRIWPYVLGLLVGLPLMAMLMFGVPVAFEVPVLKGFNFAGGSRIIPEL 250 Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326 ++L +AL+ YTA+FIAE+VR G+++V +GQMEA ++LGL+ RL+++PQA+R I+PP Sbjct: 251 VALTVALTMYTASFIAEVVRGGILSVHKGQMEAGLSLGLSRGTVLRLIVVPQALRVILPP 310 Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 LT+QYLNL KNSSLAVA+G+ DLVSV GT ++QTGQAIEII I M +YL++S++ + M Sbjct: 311 LTNQYLNLTKNSSLAVAIGYPDLVSVFAGTTMSQTGQAIEIIAITMGVYLAISLITSAMM 370 Query: 386 N 386 + Sbjct: 371 S 371 >gi|163733775|ref|ZP_02141217.1| glutamate/glutamine/aspartate/asparagine transport system permease protein [Roseobacter litoralis Och 149] gi|161392886|gb|EDQ17213.1| glutamate/glutamine/aspartate/asparagine transport system permease protein [Roseobacter litoralis Och 149] Length = 389 Score = 263 bits (672), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 160/386 (41%), Positives = 230/386 (59%), Gaps = 10/386 (2%) Query: 21 DMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYT 80 D R +++ Q I L L V + NN+ N+ L++ GFL + AG++I+Q ++ Y Sbjct: 5 DTRYRSMTFQAIALLALIVAIAYLANNLLTNLAAQGLNISYGFLGDPAGYDINQRLIEYD 64 Query: 81 SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140 S SS A A +VG +NT +AF I AT+ G + G RLS N LVA + YVE+FRNIP Sbjct: 65 SQSSNARAAVVGILNTLLVAFLACIMATVFGVIAGVLRLSNNWLVAKLMSFYVEIFRNIP 124 Query: 141 PLVVIFFLYKSVLSVLPIP------DHSIVLPFGMF-LNNRGLSFPTLTMDTNAKIFVFS 193 L+ I ++ + +V+P P + + G F NRG+ P + + V + Sbjct: 125 VLIWIIIIFTIMTAVMPAPRAFRGDEPEATMLLGAFAFTNRGIYIPAPIWGPGSMVVVAT 184 Query: 194 FVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLI-ALKYQLHFDKPVLG 252 F+ IV R + + +TG+ LP+ + S IF +PT+V+ + + D PVLG Sbjct: 185 FIASIVGVFAYRRYATNLLYETGRLLPMGWPS-LAIFFVPTIVMFFIMGRPVGLDMPVLG 243 Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312 FNF GG + ++L+ ALS YT AFIAE VR+G+ AV +GQ EAA ALGL + Sbjct: 244 GFNFQGGIQIGAPLIALWFALSIYTGAFIAENVRAGIQAVSKGQTEAASALGLRPGRVMN 303 Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL-VSVGGTIINQTGQAIEIILIWM 371 LV+LPQA+R IIPPL SQYLN+ KNSSLA+AVG+AD+ ++GG +NQTG+AIE +L+ M Sbjct: 304 LVVLPQALRVIIPPLISQYLNITKNSSLAIAVGYADITATLGGITLNQTGRAIECVLLLM 363 Query: 372 FIYLSLSIMIALFMNRLNAKIALKEK 397 YL +S+ I+ MN N + LKE+ Sbjct: 364 LFYLVISLSISAIMNVYNKTVTLKER 389 >gi|262404013|ref|ZP_06080568.1| amino acid ABC transporter permease protein [Vibrio sp. RC586] gi|262349045|gb|EEY98183.1| amino acid ABC transporter permease protein [Vibrio sp. RC586] Length = 401 Score = 263 bits (672), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 166/394 (42%), Positives = 228/394 (57%), Gaps = 1/394 (0%) Query: 5 ARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFL 64 A + + + LY+ ++ Q+I L VNN NN+E ++ G FL Sbjct: 8 ASQPSDAHSKHVNLLYNPTFRSVLFQLIAVCALGFFLYTIVNNALNNLESRGIATGFAFL 67 Query: 65 SERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKL 124 AGF I Q +V Y SY LVG +NT ++ G+ AT++G +G RLS N L Sbjct: 68 DHVAGFGISQSLVDYDETYSYGRTFLVGLLNTALVSVLGIFFATLLGFALGIARLSTNWL 127 Query: 125 VAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMD 184 ++ + VY+E FRNIP L+ IFF Y VL LP +S+ L ++LN +GL + Sbjct: 128 ISRLAAVYIETFRNIPLLLQIFFWYFVVLQALPSAKNSMHLGEWLYLNVKGLYLAKPIFE 187 Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244 + + S ++GI + + + TG+ P+ G P LV L + Sbjct: 188 SGSLWVFISLLMGIAACWLLSIWANNRQRLTGQQTPMGRYILIGCVGFPLLVYFLLGQPI 247 Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304 + P L FNF GG TV PE +L +AL+ YTA+FIAEIVRSG+ AV GQ EAA++LG Sbjct: 248 SAEYPALRGFNFQGGLTVLPELAALLVALTIYTASFIAEIVRSGINAVSHGQTEAAMSLG 307 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQA 363 L K +LV++PQA+R IIPPLTSQYLNL KNSSLA+A+G+ DLVSV GT +NQTGQA Sbjct: 308 LPRSKTLKLVIIPQALRIIIPPLTSQYLNLTKNSSLAMAIGYPDLVSVFAGTTLNQTGQA 367 Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 IEII + M +YLSLS++ + MN N K+AL E+ Sbjct: 368 IEIISMTMLVYLSLSLLTSALMNLYNRKVALVER 401 >gi|308188312|ref|YP_003932443.1| amino-acid ABC transporter permease protein yhdX [Pantoea vagans C9-1] gi|308058822|gb|ADO10994.1| Putative amino-acid ABC transporter permease protein yhdX [Pantoea vagans C9-1] Length = 392 Score = 263 bits (672), Expect = 4e-68, Method: Compositional matrix adjust. Identities = 160/367 (43%), Positives = 227/367 (61%), Gaps = 3/367 (0%) Query: 32 ILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILV 91 I+A+L V +L V+N N+ ++ G GFL AGF I Q ++ YT +YA LV Sbjct: 28 IVAVLGVVGYL--VHNTIINLANRGITSGFGFLERTAGFGIVQHLIEYTEGDTYARVFLV 85 Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151 G NT ++ ++ A+I+G VG RLS N L+ + +Y+E FRNIPPL+ IFF Y + Sbjct: 86 GLTNTLLVSALCIVFASILGFAVGLARLSDNWLLRKLSNIYIETFRNIPPLLQIFFWYFA 145 Query: 152 VLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHF 211 VL LP P ++ +++NRGL P T + FV + +L + +S R +R Sbjct: 146 VLRNLPGPRQALNAFDLAYVSNRGLYVPWPTYAPGSWPFVIALLLAVAVSYGLYRFNRQH 205 Query: 212 HEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYI 271 KTG+ + ++ P L + H+D P L FNF GGS + PE +L + Sbjct: 206 QLKTGELRRTWPAAAAMLILFPLLAHLGFGAATHWDVPQLRGFNFRGGSVMIPELAALTL 265 Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 ALS YT++FIAE++RSG+ +VP GQ EAA +LGL + R V++PQAMR IIPPLTSQY Sbjct: 266 ALSIYTSSFIAEVIRSGIQSVPHGQHEAARSLGLPNPVTLRQVIIPQAMRVIIPPLTSQY 325 Query: 332 LNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 LN++KNSSLA A+G+ D+VS+ G+++NQTGQAIE I I M +YL +S++I+L MN N Sbjct: 326 LNIVKNSSLAAAIGYPDMVSLFAGSVLNQTGQAIETIAITMGVYLIISLLISLLMNFYNR 385 Query: 391 KIALKEK 397 KIAL E+ Sbjct: 386 KIALVER 392 >gi|262171610|ref|ZP_06039288.1| amino acid ABC transporter permease protein [Vibrio mimicus MB-451] gi|261892686|gb|EEY38672.1| amino acid ABC transporter permease protein [Vibrio mimicus MB-451] Length = 401 Score = 262 bits (670), Expect = 5e-68, Method: Compositional matrix adjust. Identities = 171/398 (42%), Positives = 230/398 (57%), Gaps = 9/398 (2%) Query: 5 ARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFL 64 A + + LY+ Q + L+ VNN NN+E ++ G FL Sbjct: 8 ASQHADAHSKHANLLYNPTFRAAVFQFLAVCALSFFLYTIVNNALNNLESRGIATGFAFL 67 Query: 65 SERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKL 124 AGF I Q +V Y SY LVG +NT ++ G+I AT++G ++G RLS N L Sbjct: 68 DHAAGFGISQSLVDYDETYSYGRTFLVGLLNTALVSVLGIIFATLLGFVLGIARLSRNWL 127 Query: 125 VAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMD 184 ++ + VY+E FRNIP L+ IFF Y VL LP S+ L ++LN +GL + Sbjct: 128 ISRLAAVYIETFRNIPLLLQIFFWYFVVLQALPSAKQSMHLGEWLYLNVKGLYLVKPVFE 187 Query: 185 TNAKIFVFSFVLGI----VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240 + + + + GI VLS++A R TG+ P+ P LV AL Sbjct: 188 AGSLWVLIALLAGITFCWVLSIWANNRQR----LTGQQTPMGRYVLICCVVFPLLVYFAL 243 Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300 + + PVL FNF GG TV PE +L +AL+ YTA+FIAEIVRSG+ AV GQ EAA Sbjct: 244 GQPISAEYPVLRGFNFQGGLTVLPELAALLVALTIYTASFIAEIVRSGINAVSHGQTEAA 303 Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQ 359 ++LGL K +LV++PQA+R IIPPLTSQYLNL KNSSLA+A+G+ DLVSV GT +NQ Sbjct: 304 MSLGLPRAKTLKLVIIPQALRIIIPPLTSQYLNLTKNSSLAMAIGYPDLVSVFAGTTLNQ 363 Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 TGQAIEII + M +YLSLS++ + MN N K+AL E+ Sbjct: 364 TGQAIEIISMTMLVYLSLSLLTSALMNLYNRKVALVER 401 >gi|258627557|ref|ZP_05722334.1| amino acid ABC transporter, permease protein [Vibrio mimicus VM603] gi|258580139|gb|EEW05111.1| amino acid ABC transporter, permease protein [Vibrio mimicus VM603] Length = 401 Score = 262 bits (670), Expect = 6e-68, Method: Compositional matrix adjust. Identities = 171/398 (42%), Positives = 230/398 (57%), Gaps = 9/398 (2%) Query: 5 ARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFL 64 A + + LY+ Q + L+ VNN NN+E ++ G FL Sbjct: 8 ASQHADAHSKHANLLYNPTFRAAVFQFLAVCALSFFLYTIVNNALNNLESRGIATGFAFL 67 Query: 65 SERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKL 124 AGF I Q +V Y SY LVG +NT ++ G+I AT++G ++G RLS N L Sbjct: 68 DHAAGFGISQSLVDYDETYSYGRTFLVGLLNTALVSVLGIIFATLLGFVLGIARLSRNWL 127 Query: 125 VAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMD 184 ++ + VY+E FRNIP L+ IFF Y VL LP S+ L ++LN +GL + Sbjct: 128 ISRLAAVYIETFRNIPLLLQIFFWYFVVLQALPSAKQSMHLGEWLYLNVKGLYLVKPVFE 187 Query: 185 TNAKIFVFSFVLGI----VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240 + + + + GI VLS++A R TG+ P+ P LV AL Sbjct: 188 AGSLWVLIALLAGIAFCWVLSIWANNRQR----LTGQQTPMGRYVLICCVVFPLLVYFAL 243 Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300 + + PVL FNF GG TV PE +L +AL+ YTA+FIAEIVRSG+ AV GQ EAA Sbjct: 244 GQPISAEYPVLRGFNFQGGLTVLPELAALLVALTIYTASFIAEIVRSGINAVSHGQTEAA 303 Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQ 359 ++LGL K +LV++PQA+R IIPPLTSQYLNL KNSSLA+A+G+ DLVSV GT +NQ Sbjct: 304 MSLGLPRAKTLKLVIIPQALRIIIPPLTSQYLNLTKNSSLAMAIGYPDLVSVFAGTTLNQ 363 Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 TGQAIEII + M +YLSLS++ + MN N K+AL E+ Sbjct: 364 TGQAIEIISMTMLVYLSLSLLTSALMNLYNRKVALVER 401 >gi|254488695|ref|ZP_05101900.1| glutamate/glutamine/aspartate/asparagine transport system permease protein [Roseobacter sp. GAI101] gi|214045564|gb|EEB86202.1| glutamate/glutamine/aspartate/asparagine transport system permease protein [Roseobacter sp. GAI101] Length = 404 Score = 262 bits (669), Expect = 7e-68, Method: Compositional matrix adjust. Identities = 158/389 (40%), Positives = 231/389 (59%), Gaps = 10/389 (2%) Query: 18 FLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIV 77 L D R + + Q I +LL + + N+ N+ ++ L++ FL AG++I+Q ++ Sbjct: 17 LLNDTRYRSYTFQFIALMLLIALMAFLGINLVRNLAEAGLNISYDFLGVPAGYDINQTLI 76 Query: 78 PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137 Y S S+ A +VG +NT +AF + ATI+G + G RLS N LV+ + VYVE+FR Sbjct: 77 DYNSQSTNLRAAVVGIINTLLVAFLACLTATILGVIAGVARLSNNWLVSKLMAVYVEIFR 136 Query: 138 NIPPLVVIFFLYKSVLSVLPIPDH------SIVLPFGMF-LNNRGLSFPTLTMDTNAKIF 190 NIP L+ I +Y + +VLP P+ S + F F NRG+ P + I Sbjct: 137 NIPVLIWILMIYTLMTAVLPAPNAFRGDNPSSSMLFDAFAFTNRGVYIPAPVWGPGSMIV 196 Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL-VLIALKYQLHFDKP 249 V +F L I+ R + +TGK LPL + T I +PTL V + + D P Sbjct: 197 VATFTLSIIAVFLYRRYAVKLLFETGKLLPLGW-PTLAILIVPTLLVFFVMGSPIGLDYP 255 Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309 L FNF GG + ++L++ALS YT AFIAE VR+G+ A+ +GQ EAA +LGL ++ Sbjct: 256 ALRGFNFQGGLQIGAPLIALWLALSVYTGAFIAENVRAGIQAISKGQTEAAASLGLRPKR 315 Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV-SVGGTIINQTGQAIEIIL 368 LV+LPQA+R IIPPL SQYLN+ KNSSLA+AVG+AD+ ++GG +NQTG+AIE +L Sbjct: 316 VMNLVVLPQALRVIIPPLISQYLNITKNSSLAIAVGYADITATLGGITLNQTGRAIECVL 375 Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKEK 397 + M YL++S+ I+ MN N ++LKE+ Sbjct: 376 LLMLFYLTISLSISAIMNVYNNNVSLKER 404 >gi|84515668|ref|ZP_01003029.1| ABC glutamate/glutamine/aspartate/asparagine transporter, inner membrane subunit BztB [Loktanella vestfoldensis SKA53] gi|84510110|gb|EAQ06566.1| ABC glutamate/glutamine/aspartate/asparagine transporter, inner membrane subunit BztB [Loktanella vestfoldensis SKA53] Length = 404 Score = 262 bits (669), Expect = 7e-68, Method: Compositional matrix adjust. Identities = 156/389 (40%), Positives = 230/389 (59%), Gaps = 10/389 (2%) Query: 18 FLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIV 77 LYD R ++++Q++ A+L+ + V+N N+ + FL AG++I+Q I+ Sbjct: 17 LLYDARYRSLTIQVVAAMLIMLFLAQLVDNTVTNLAVLGKDISFSFLWSTAGYDINQQII 76 Query: 78 PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137 P+TS ++A A LVG +NT +A G I AT+IG G RLS N LVA + YVE R Sbjct: 77 PFTSQDTHARAALVGILNTLLVAVLGCILATVIGVFAGVLRLSKNWLVARVMTFYVECMR 136 Query: 138 NIPPLVVIFFLYKSVLSVLPIPDH-------SIVLPFGMFLNNRGLSFPTLTMDTNAKIF 190 N P L+ I ++ + P P ++V + + NRG+ P + I Sbjct: 137 NTPLLIWILIVFAVMTEATPQPRDFREGGTAAMVFADSVAVTNRGVFIPRPIWADGSGIV 196 Query: 191 VFSFVLGIVLSLFATR-LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249 V +L I+ +F R ++R E TG+ LP+L +S ++ TL A+ + + P Sbjct: 197 VAFLILSII-GIFVLRYVARKRQEDTGQQLPVLRLSLAMLIVPVTLAFFAVGRPITLEYP 255 Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309 LG FNF GG V F++L++ALS YT+AFIAEIVRSG++AV +GQ EAA ALG+ + Sbjct: 256 ELGGFNFEGGLQVRNSFIALWLALSLYTSAFIAEIVRSGILAVSKGQTEAAFALGMQPNR 315 Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS-VGGTIINQTGQAIEIIL 368 +L++LPQA+R IIPPL SQ+LNL KNSSLA+AVG+ D S +GG +NQTG+ +E IL Sbjct: 316 TMQLIILPQALRVIIPPLISQFLNLTKNSSLALAVGYMDARSTLGGITVNQTGRELEGIL 375 Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKEK 397 + YL S++I+ MN N+ + LKE+ Sbjct: 376 LLGIFYLITSLIISSAMNFYNSGVKLKER 404 >gi|157148849|ref|YP_001456168.1| hypothetical protein CKO_04682 [Citrobacter koseri ATCC BAA-895] gi|157086054|gb|ABV15732.1| hypothetical protein CKO_04682 [Citrobacter koseri ATCC BAA-895] Length = 393 Score = 262 bits (669), Expect = 8e-68, Method: Compositional matrix adjust. Identities = 157/369 (42%), Positives = 224/369 (60%), Gaps = 1/369 (0%) Query: 30 QIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAI 89 QI+ + + + ++ ++N NN+ ++ G FL AGF I Q ++ Y +Y Sbjct: 25 QILAVIAVVSVAVYLIHNTINNLSSRGITSGFAFLDRSAGFGIVQHLIDYEQGDTYGRVF 84 Query: 90 LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 LVG +NT ++ ++ A+ +G +G RLS N L+ + +Y+E FRNIPPL+ IFF Y Sbjct: 85 LVGLLNTLLVSALCIVFASFLGFFLGLARLSDNWLLRKLSTIYIETFRNIPPLLQIFFWY 144 Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209 +VL LP P ++ +FL+NRGL P + F + +L IV+S R ++ Sbjct: 145 FAVLRNLPGPRQAVSALDLVFLSNRGLYIPAPQLGEGVIAFCVAILLAIVISTGLFRFNK 204 Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269 KTG+ + LI LP + LH+D P L FNF GG + PE +L Sbjct: 205 THQIKTGQLRRTWPTALALIVLLPAVAQWLFGAALHWDVPELRGFNFRGGMALIPELAAL 264 Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329 +ALS YT+AFIAEI+RSG+ AVP GQ EAA +LGL + R V++PQA+R IIPPLTS Sbjct: 265 TLALSVYTSAFIAEIIRSGIQAVPHGQHEAARSLGLPNPVTLRQVIIPQALRVIIPPLTS 324 Query: 330 QYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388 QYLN++KNSSLA A+G+ D+VS+ GT++NQTGQAIE I I M +YL +S+ I+L MN Sbjct: 325 QYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAITMSVYLIISLSISLLMNIY 384 Query: 389 NAKIALKEK 397 N +IAL E+ Sbjct: 385 NRRIALIER 393 >gi|156741439|ref|YP_001431568.1| polar amino acid ABC transporter inner membrane subunit [Roseiflexus castenholzii DSM 13941] gi|156232767|gb|ABU57550.1| polar amino acid ABC transporter, inner membrane subunit [Roseiflexus castenholzii DSM 13941] Length = 396 Score = 262 bits (669), Expect = 8e-68, Method: Compositional matrix adjust. Identities = 159/398 (39%), Positives = 246/398 (61%), Gaps = 13/398 (3%) Query: 6 RKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLS 65 R T SR F D R I++QI+ L+ + + N+ ++ + L+LG FL+ Sbjct: 6 RPTSPLRLSR-AFWRDERFIQIAIQILFLALVIWVGSVALRNMLTSLRQQGLALGFDFLN 64 Query: 66 ERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLV 125 AGF+I ++ Y+S ++A A+ VG +NT ++ G++ AT++G +VG RLS+N LV Sbjct: 65 SGAGFDISDALIAYSSSDTFARALQVGLLNTVVVSLLGIVLATLLGIVVGVARLSSNWLV 124 Query: 126 AWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSI-VLPFGMFLNNRGLSFP----T 180 + V+VE+ RN+P LV++ F+Y + LP ++ + P ++L+NRG++ P T Sbjct: 125 NRMAWVFVEIMRNVPLLVLLVFIYTAFFLKLPRARQAVNIGP--VYLSNRGVAVPWGEPT 182 Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240 T + V + + G ++ R + E++G+ PL++ S I + + +AL Sbjct: 183 DTWSLYMSVLVGALIAGALVGFAMHR----WQEQSGRPRPLVWFSLLTIAVIAMVGWVAL 238 Query: 241 -KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299 + L P + FNF GG +SPEFM+L I L YTA FI E+VR+G+ AVP+GQ+EA Sbjct: 239 PQPPLILSYPEIAGFNFQGGRVLSPEFMALLIGLVLYTAGFIGEVVRAGIQAVPKGQVEA 298 Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359 A ALGLT + RLV+ PQA+R IIPP+T+QYLNL KNS+LAVA+G+ DL +V GTIINQ Sbjct: 299 ARALGLTPSRTLRLVVFPQALRLIIPPITNQYLNLTKNSTLAVAIGYPDLFAVSGTIINQ 358 Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 TG+A+E+I + M +YL LS++ +L MN N ++ L E+ Sbjct: 359 TGRAVEMIAVVMAVYLILSLLTSLIMNWYNRRVRLVER 396 >gi|110678762|ref|YP_681769.1| glutamate/glutamine/aspartate/asparagine transport system permease protein [Roseobacter denitrificans OCh 114] gi|109454878|gb|ABG31083.1| glutamate/glutamine/aspartate/asparagine transport system permease protein [Roseobacter denitrificans OCh 114] Length = 404 Score = 262 bits (669), Expect = 9e-68, Method: Compositional matrix adjust. Identities = 159/388 (40%), Positives = 231/388 (59%), Gaps = 10/388 (2%) Query: 19 LYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVP 78 L D R +I+ Q I L L V + NN++ N+ L++ GFL + AG++I+Q ++ Sbjct: 18 LNDTRYRSITFQAIALLALIVAIAYLANNLFTNLAAQGLNISYGFLGDPAGYDINQRLIE 77 Query: 79 YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138 Y S SS A A LVG +NT +AF I AT+ G + G RLS N LV+ + YVE+FRN Sbjct: 78 YDSQSSNARAALVGILNTLLVAFLACIMATVFGVIAGVLRLSNNWLVSKLMSFYVEIFRN 137 Query: 139 IPPLVVIFFLYKSVLSVLPIP------DHSIVLPFGMF-LNNRGLSFPTLTMDTNAKIFV 191 IP L+ I ++ + +V+P P + + G F NRG+ P + + V Sbjct: 138 IPVLIWIIIIFTIMTAVMPAPRAFRGDEPEATMLLGAFAFTNRGIYIPAPIWGPGSMVVV 197 Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLI-ALKYQLHFDKPV 250 +F+ +V R +++ +TG+ LP+ + S IF +PT+V+ + + D P Sbjct: 198 ATFIASVVGVFAYRRYAKNLLYQTGRLLPMGWPS-LAIFFVPTIVMFFIMGRPIGLDIPE 256 Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 LG FNF GG + ++L+ ALS YT AFIAE VR+G+ AV +GQ EAA ALGL + Sbjct: 257 LGGFNFRGGIQIGAPLIALWFALSIYTGAFIAENVRAGIQAVSKGQTEAASALGLHPGRV 316 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL-VSVGGTIINQTGQAIEIILI 369 LV+LPQA+R IIPPL S YLN+ KNSSLA+AVG+AD+ ++GG +NQTG+AIE +L+ Sbjct: 317 MNLVVLPQALRVIIPPLISHYLNITKNSSLAIAVGYADITATLGGITLNQTGRAIECVLL 376 Query: 370 WMFIYLSLSIMIALFMNRLNAKIALKEK 397 M YL +S+ I+ MN N + LKE+ Sbjct: 377 LMLFYLVISLSISAIMNVYNKTVTLKER 404 >gi|167041375|gb|ABZ06128.1| putative binding-protein-dependent transport system inner membrane component [uncultured marine microorganism HF4000_005K23] Length = 399 Score = 261 bits (668), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 165/375 (44%), Positives = 227/375 (60%), Gaps = 8/375 (2%) Query: 30 QIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEID-QGIVPYTSDSSYATA 88 Q ++ + IF + N NM+ + G+ FL E + F+I V Y SYATA Sbjct: 26 QALVVFFIVFIFGYFSYNAQVNMDNRGIDFGLRFLGEESSFDIQFTPFVEYDGTKSYATA 85 Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 LVG +NT ++ G+ ATI+G +VG RLS N L+A + +YVE+FRN+P L+ +FF Sbjct: 86 YLVGLINTIIVSLVGIFFATILGVVVGISRLSPNYLIAKMSEIYVEIFRNVPLLLQLFFW 145 Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS 208 Y + L LP+P +I FL+ +G P TN +F S + I++ F R Sbjct: 146 YFTALRALPLPKDAISFFDVSFLSIKGFYVPRFIW-TNGSLFFVSIIASIIVIFFLLRFF 204 Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ-----FNFIGGSTVS 263 + E+TGK P +IS +I LP L + L F+ P L Q +NF GG ++ Sbjct: 205 KKKQEQTGKQYPKFFISLTIITVLPFLTFLIGGVSLDFEYPELKQLSKTIYNFKGGISII 264 Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 PE M+L +ALS YTA FIAE VR+G+ + RGQ EAA ++GLT +A +LV++PQA+R I Sbjct: 265 PELMALALALSLYTATFIAECVRAGIEGISRGQKEAAASIGLTPGQALKLVIMPQALRII 324 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIA 382 IPP T+QYLNL KNSSLA A+ + D+V V GT + QTG+AIEII I M YL+LSI I+ Sbjct: 325 IPPTTNQYLNLTKNSSLAAAIAYPDIVLVFAGTALMQTGRAIEIISITMLTYLTLSISIS 384 Query: 383 LFMNRLNAKIALKEK 397 +FMN N KIA+KEK Sbjct: 385 IFMNWYNKKIAIKEK 399 >gi|260223279|emb|CBA33682.1| General L-amino acid transport system permease protein aapQ [Curvibacter putative symbiont of Hydra magnipapillata] Length = 369 Score = 261 bits (667), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 143/353 (40%), Positives = 212/353 (60%), Gaps = 3/353 (0%) Query: 46 NNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMI 105 +N NM+ + G FL+ AGF+I + + S SY A LVGFVNT +A G++ Sbjct: 19 HNTTTNMKLRGIQSGFDFLTGPAGFDIGESFFAFDSGESYWRAYLVGFVNTLRVAVVGIV 78 Query: 106 PATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVL 165 T++GTL+G GR S N L+ +C YVE FRNIP L+ + Y VLP + +VL Sbjct: 79 LTTLLGTLIGVGRFSRNALIRGLCSAYVEFFRNIPVLLQLLMWYLMFTEVLPASNEPLVL 138 Query: 166 -PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224 PF FL+ GL+FP T + + G++ ++ ++ E+TG+ + + Sbjct: 139 GPF--FLSKGGLNFPIPEWATGHVWGAWGLLAGVIGAVLYRSYAKKSFEQTGRVKSMFWT 196 Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284 ++ G L + + PV G+F G ++PE++S+ + L+ YTAAF++E+ Sbjct: 197 PLAIVLGAGILGWLLGGAPTALNMPVQGEFAIENGGALTPEYLSVLLGLTIYTAAFVSEV 256 Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344 VR G+ +V GQ EAA ALGL+ + RLV+LPQA+R IIPP+T+QYLNL KNSSLAVA+ Sbjct: 257 VRGGIQSVALGQSEAAAALGLSRGQTMRLVMLPQALRVIIPPVTNQYLNLTKNSSLAVAI 316 Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 G+ D+VS+ T INQTG+A+E I I M +YLS S+ ++ MN N + A+KE+ Sbjct: 317 GYPDVVSIANTAINQTGRAVECIAIIMLVYLSTSLFTSITMNWYNTRSAIKER 369 >gi|322834719|ref|YP_004214746.1| polar amino acid ABC transporter inner membrane subunit [Rahnella sp. Y9602] gi|321169920|gb|ADW75619.1| polar amino acid ABC transporter, inner membrane subunit [Rahnella sp. Y9602] Length = 392 Score = 261 bits (667), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 154/370 (41%), Positives = 224/370 (60%), Gaps = 3/370 (0%) Query: 30 QIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAI 89 QI +LL + ++N N+ ++ G FL + AGF I Q ++ Y +YA Sbjct: 24 QIFAVVLLVACLGYLLHNTITNLTTRGITSGFAFLEKGAGFGIVQHLIDYQEGDTYARVF 83 Query: 90 LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 ++G +NT ++ ++ A+I+G ++G GRLS N L+ + VY+E FRNIPPL+ IFF Y Sbjct: 84 VIGLLNTLLVSALCIVFASILGFIIGLGRLSDNWLIRKVSTVYIETFRNIPPLLQIFFWY 143 Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209 +VL LP P S+ F++NRGL P+ + + + F VL + + A + Sbjct: 144 FAVLRNLPGPRQSLNAFDLAFVSNRGLYLPSPELAPGS-LAGFIAVLLAIFGIIALQRYN 202 Query: 210 HFHE-KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268 HF + TG+ + + ++ P L + LH+D P L FNF GG + PE + Sbjct: 203 HFRQIHTGRIWHIWPWAIVMLVVFPALAHLIFGPALHWDVPALRGFNFRGGMVLIPELAA 262 Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328 L +ALS YT+ FIAE++RSG+ +V GQ EAA +LGL + R V+LPQAMR IIPPLT Sbjct: 263 LTLALSVYTSTFIAEVIRSGIQSVSHGQHEAARSLGLPNPVTLRQVILPQAMRVIIPPLT 322 Query: 329 SQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387 SQYLN++KNSSLA A+G+ D+VS+ GT++NQTGQAIE I I M +YL +S+ I+ MN Sbjct: 323 SQYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAITMSVYLIISLAISFLMNI 382 Query: 388 LNAKIALKEK 397 N +IAL E+ Sbjct: 383 YNRRIALVER 392 >gi|227327915|ref|ZP_03831939.1| L-amino acid ABC transporter permease protein [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 392 Score = 261 bits (667), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 154/356 (43%), Positives = 221/356 (62%), Gaps = 1/356 (0%) Query: 43 WCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFS 102 + ++N N+ + ++ G FL++ AGF I Q ++ Y +YA +VG NT ++ Sbjct: 37 YLLHNTVTNLAQRGITSGFDFLNKSAGFGIVQHLIDYQQGDTYARVFVVGLFNTLLVSAL 96 Query: 103 GMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHS 162 ++ A+I+G VG RLS N L+ I +Y+E+FRNIPPL+ IFF Y +VL LP P S Sbjct: 97 CIVFASILGFTVGLARLSDNWLLRKISNIYIEIFRNIPPLLQIFFWYFAVLRNLPGPRQS 156 Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222 I FL+NRG P+ + A F S ++ +++ R ++ +H TG+ Sbjct: 157 ISAFDVAFLSNRGFYLPSPELGPGAAAFFLSLLITAIVTWVVFRRNKRYHALTGQPRRTW 216 Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282 ++ L L TL + H+D P L FNF GG + PE +L +ALS YT++FIA Sbjct: 217 PLTLGLFLVLCTLSHLIFGPAFHWDMPELKGFNFRGGMVLIPELAALTVALSVYTSSFIA 276 Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342 EI+RSG+ +V GQ EAA +LGL + R V+LPQA+R IIPPLTSQYLN++KNSSLA Sbjct: 277 EIIRSGIQSVSHGQHEAARSLGLPNPVTLRKVILPQALRVIIPPLTSQYLNIVKNSSLAA 336 Query: 343 AVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 A+G+ D+VS+ GT++NQTGQAIE I I M +YL +S++I+L MN N KIAL E+ Sbjct: 337 AIGYPDMVSLFAGTVLNQTGQAIETIAITMSVYLIISLLISLLMNLYNRKIALVER 392 >gi|27378023|ref|NP_769552.1| ABC transporter permease [Bradyrhizobium japonicum USDA 110] gi|27351169|dbj|BAC48177.1| blr2912 [Bradyrhizobium japonicum USDA 110] Length = 395 Score = 260 bits (665), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 154/359 (42%), Positives = 215/359 (59%), Gaps = 3/359 (0%) Query: 39 VIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFW 98 + FLW +N N+ ++ G FL AG I ++ Y +Y A +VG VNT Sbjct: 40 IAFLW--SNTVTNLSARRITTGFAFLGREAGMPIADSLLAYNPRDTYLWAFVVGIVNTLR 97 Query: 99 LAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPI 158 +A G++ ATI+GTL+G RLSAN L++ + VYVE R+IP L+ + F Y ++ LP Sbjct: 98 VAVIGIVLATILGTLIGISRLSANWLLSRLAAVYVETLRDIPLLLQLLFWY-VLMQGLPA 156 Query: 159 PDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKA 218 + G+FL+NRGL P + + + + LG + R + GK Sbjct: 157 ARAAFRPLEGVFLSNRGLILPAIPIGAPQLWVLGTAALGCAVFYVFRRWQIAQQMRDGKP 216 Query: 219 LPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTA 278 + LI LP V + L + P L FNF+GG T++PE+ +L IAL YT+ Sbjct: 217 RSAWPFALGLIVMLPAAVSVLLGVPWAIEWPELRGFNFVGGLTLAPEYFALLIALVAYTS 276 Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338 AFIAEIVRSG+ +VPRGQ +AA ALGL R ++LPQA+R I+PP+TSQYLNL KNS Sbjct: 277 AFIAEIVRSGIQSVPRGQWDAANALGLRRSFMLRQIILPQALRVIVPPMTSQYLNLTKNS 336 Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 SLAVA+G+ D+VSV T +NQTGQAIE I + M ++L++S+ I+ FMN NA+IAL E+ Sbjct: 337 SLAVAIGYQDVVSVANTTLNQTGQAIEAIALIMAVFLTISLGISFFMNWYNARIALVER 395 >gi|219847286|ref|YP_002461719.1| polar amino acid ABC transporter inner membrane subunit [Chloroflexus aggregans DSM 9485] gi|219541545|gb|ACL23283.1| polar amino acid ABC transporter, inner membrane subunit [Chloroflexus aggregans DSM 9485] Length = 400 Score = 260 bits (664), Expect = 3e-67, Method: Compositional matrix adjust. Identities = 166/392 (42%), Positives = 235/392 (59%), Gaps = 16/392 (4%) Query: 16 MKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQG 75 + F D R+ I VQ++ AL + + + +N+ N + ++NL FLS AGF I + Sbjct: 15 IPFYRDTRIIAIIVQVVFALAVVALLWYLYSNMMNGLRQANLLPTFAFLSVPAGFPISES 74 Query: 76 IVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEV 135 ++ Y +Y A +VG +NT +A G+I AT++G ++G RLS N L+ + VYVE+ Sbjct: 75 VIEYDPSKTYGQAFIVGILNTIRVAGIGIILATLLGLILGIARLSDNWLLRNVALVYVEI 134 Query: 136 FRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRG--LSFPTLTMDTNAKIFVF- 192 RNIP L+ + F + S+ + P SI + MFL+NRG L++P D + ++ Sbjct: 135 VRNIPLLLQLIFWF-SLTRLFPRIQESIEVGGLMFLHNRGVTLAWPQTANDFDKWMWWVY 193 Query: 193 -SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV- 250 V+GI+ + R+ ++ G ALP + F I LV L Y L+ PV Sbjct: 194 GGIVIGIIFYV-VRRIQFARRDRPGVALPYAILIAFAI----ALVGFLLSYVLYGAWPVS 248 Query: 251 -----LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305 L +FNF+GG TV+ F +L + L YTA FI EIVRSG++AV +GQ EAA ALGL Sbjct: 249 LSIPELQRFNFVGGITVTNSFAALLVGLVIYTAVFIGEIVRSGILAVSKGQREAARALGL 308 Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365 T + RLV+LPQA+R IIPPLTSQYLNL KNSSLA+AV + DL V TI NQTGQA+ Sbjct: 309 TPGQTMRLVILPQALRVIIPPLTSQYLNLTKNSSLAIAVAYPDLFYVANTINNQTGQAVP 368 Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 +IL+ M YLS+S++ +LFMN N +I L E+ Sbjct: 369 VILMLMVSYLSVSLLTSLFMNWYNRRIQLVER 400 >gi|261819588|ref|YP_003257694.1| polar amino acid ABC transporter inner membrane protein [Pectobacterium wasabiae WPP163] gi|261603601|gb|ACX86087.1| polar amino acid ABC transporter, inner membrane subunit [Pectobacterium wasabiae WPP163] Length = 392 Score = 259 bits (663), Expect = 4e-67, Method: Compositional matrix adjust. Identities = 162/379 (42%), Positives = 230/379 (60%), Gaps = 21/379 (5%) Query: 30 QIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAI 89 QII+ + + I + ++N N+ + ++ G FL++ AGF I Q ++ Y +YA Sbjct: 24 QIIVVITVLAIAAYLLHNTVTNLAQRGITSGFDFLNKSAGFGIVQHLIDYQQGDTYARVF 83 Query: 90 LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 LVG NT ++ ++ A+I+G +G RLS N L+ I +Y+E+FRNIPPL+ IFF Y Sbjct: 84 LVGLFNTLLVSALCIVFASILGFTIGLARLSDNWLLRKISNIYIEIFRNIPPLLQIFFWY 143 Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209 +VL LP P SI FL+NRG P+ M F S ++ +V++ R ++ Sbjct: 144 FAVLRNLPGPRQSISAFDIAFLSNRGFYLPSPEMGPGTAAFFLSLLITLVVTWAVLRRNQ 203 Query: 210 HFHEKTGKA----------LPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGG 259 +H TG+ L +L + LIFG P H+D P L FNF GG Sbjct: 204 RYHALTGQVRRTWPLTLGLLLVLCALSHLIFG-PAF---------HWDVPELKGFNFRGG 253 Query: 260 STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319 + PE +L +ALS YT++FIAEI+RSG+ +V GQ EAA +LGL + R V+LPQA Sbjct: 254 MVLIPELAALTVALSVYTSSFIAEIIRSGIQSVSHGQHEAARSLGLPNPVTLRKVILPQA 313 Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLS 378 +R IIPPLTSQYLN++KNSSLA A+G+ D+VS+ GT++NQTGQAIE I I M +YL +S Sbjct: 314 LRVIIPPLTSQYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAITMSVYLIIS 373 Query: 379 IMIALFMNRLNAKIALKEK 397 ++I+L MN N KIAL E+ Sbjct: 374 LLISLLMNLYNRKIALVER 392 >gi|56697222|ref|YP_167587.1| amino acid ABC transporter, permease protein [Ruegeria pomeroyi DSS-3] gi|56678959|gb|AAV95625.1| amino acid ABC transporter, permease protein [Ruegeria pomeroyi DSS-3] Length = 390 Score = 259 bits (662), Expect = 5e-67, Method: Compositional matrix adjust. Identities = 150/370 (40%), Positives = 229/370 (61%), Gaps = 4/370 (1%) Query: 28 SVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYAT 87 V +++ +L V+F +N N+ + G FL AG I ++ Y+ SY Sbjct: 25 GVLVVVIAILYVLF----SNTQENLAIRGIESGFAFLGHEAGLPIGDSLIDYSPTRSYGY 80 Query: 88 AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147 A LVG +NT +++ ++ +T++G ++G R+S N L+A +YVE RN+P L+ +FF Sbjct: 81 AFLVGILNTLFVSVLAIVFSTLLGIVIGVARVSRNWLLAKGAAIYVETLRNLPLLLTLFF 140 Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRL 207 +Y VL+ LP P +I L G+FL+ RG P + +F+ + + +VL++ R Sbjct: 141 IYTVVLAALPHPRDAIALSEGVFLSKRGFYLPRPVAEDGIGLFLGASAVALVLAVMFWRW 200 Query: 208 SRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFM 267 ++ + +TG+++P L + L L +A L + PV FNF GG ++ PEF Sbjct: 201 AKSYKVRTGRSVPGLRGGLAIFLALSGLAFLASGQPLTSELPVYKGFNFKGGLSIKPEFA 260 Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327 SL I L YTAA++AE VRSG+ +V GQ+EAA ALG++ TR+VLLPQA+R IP Sbjct: 261 SLLIGLVLYTAAYVAENVRSGIQSVHAGQIEAANALGVSSGVVTRMVLLPQALRVTIPAT 320 Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387 T+ Y +L+KNSSLAVA+G+ D+VSVGGTII Q GQAIEII +WM +YL+++++I+L MN Sbjct: 321 TNDYASLVKNSSLAVAIGYPDMVSVGGTIIGQNGQAIEIIAMWMAVYLTINLIISLGMNM 380 Query: 388 LNAKIALKEK 397 LNA++ L E+ Sbjct: 381 LNARVQLVER 390 >gi|188532410|ref|YP_001906207.1| Hypothetical amino-acid ABC transporter permease protein [Erwinia tasmaniensis Et1/99] gi|188027452|emb|CAO95299.1| Hypothetical amino-acid ABC transporter permease protein [Erwinia tasmaniensis Et1/99] Length = 392 Score = 259 bits (662), Expect = 5e-67, Method: Compositional matrix adjust. Identities = 155/356 (43%), Positives = 216/356 (60%), Gaps = 1/356 (0%) Query: 43 WCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFS 102 + ++N NN+ ++ G GFL AGF I Q ++ YT SYA LVG NT ++ Sbjct: 37 YLIHNTINNLASRGITSGFGFLERSAGFGIVQHLIDYTEGDSYARVFLVGLTNTLLVSAL 96 Query: 103 GMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHS 162 + A+++G VG RLS N L+ + VYVE FRNIPPL+ IFF Y +VL LP P + Sbjct: 97 CIFFASLLGFFVGLARLSDNWLLRKLSTVYVETFRNIPPLLQIFFWYFAVLRNLPGPRQA 156 Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222 + F++NRGL P F+ + +L I ++ R ++ + KTG+ Sbjct: 157 LNAFDLAFVSNRGLYVPWPEYAAGTVPFLLALLLAIAVTTVLFRYNKQYQLKTGRQRRTW 216 Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282 + + P + + +H+D P L FNF GG + PE +L +ALS YT+ FIA Sbjct: 217 PAAVATLVMFPLVAFLLAGSPMHWDVPQLRGFNFRGGFVLIPELAALTLALSIYTSTFIA 276 Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342 E++RSG+ +VP GQ EAA +LGL H R V++PQAMR IIPPLTSQYLN++KNSSLA Sbjct: 277 EVIRSGIQSVPHGQHEAASSLGLPHAATLRQVIIPQAMRVIIPPLTSQYLNVVKNSSLAA 336 Query: 343 AVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 A+G+ D+VS+ GT++NQTGQAIE I I M +YL +S+ I+L MN N KIAL E+ Sbjct: 337 AIGYPDMVSLFAGTVLNQTGQAIETIAITMGVYLIISLSISLLMNIYNRKIALIER 392 >gi|84685381|ref|ZP_01013279.1| glutamate/glutamine/aspartate/asparagine ABC transporter, permease protein [Maritimibacter alkaliphilus HTCC2654] gi|84666538|gb|EAQ13010.1| glutamate/glutamine/aspartate/asparagine ABC transporter, permease protein [Rhodobacterales bacterium HTCC2654] Length = 419 Score = 259 bits (661), Expect = 6e-67, Method: Compositional matrix adjust. Identities = 160/420 (38%), Positives = 240/420 (57%), Gaps = 42/420 (10%) Query: 18 FLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIV 77 +YD R + ++QI+ + ++ W V+N N+ S+G GFL+E AG++I+Q ++ Sbjct: 2 LIYDSRYRSATIQIVALIGFLLLIGWLVSNTVQNLADLGKSVGFGFLTEPAGYDINQRLL 61 Query: 78 PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137 Y S S+A A L+G +NT +A G I ATI+G +VG RLS N LVA I VYVE+FR Sbjct: 62 DYDSRDSHARASLMGLLNTLLVAVLGCIMATIVGVIVGVLRLSNNWLVARIMTVYVEMFR 121 Query: 138 NIPPLVVIFFLYKSVLSVLPIPDH--------SIVLPFGMFLNNRGLSFPTL---TMDTN 186 N+P L+ I F ++ LP P S++L + L NRG+ P MD Sbjct: 122 NVPVLLWIVFSMAILIETLPAPSAFRGDEPSASMLLGDSVALTNRGVYVPEPLFGRMDEE 181 Query: 187 AK----------------------------IFVFSFVLGIVLSLFATRLSRHFHEKTGKA 218 +F+ + + GI++S + + TG Sbjct: 182 GHPLTWRQGLGDIHLFGEAWFRFDVSLELVVFLSTLIAGILVSRLIGQRADRIQNSTGVR 241 Query: 219 LPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTA 278 ++ +I +P+++++ L + KP L FNF GG+ + F++L++ALS YTA Sbjct: 242 PKTFWLRAAVIV-VPSVIVLWL-MGFYLGKPALRGFNFDGGTHLRNSFIALWLALSLYTA 299 Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338 AFIAEIVR G++A+ +GQ EAA ALG+ R+ LV+LPQAMR IIPPL SQYLNL KNS Sbjct: 300 AFIAEIVRGGILAISKGQTEAAAALGIRPRRIMSLVILPQAMRVIIPPLISQYLNLTKNS 359 Query: 339 SLAVAVGFADLV-SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 SLA+AVG+ DL ++ G +NQTG+ +E +++ M IYL++S+ I+ MN N ++ LKE+ Sbjct: 360 SLAIAVGYMDLTGTLMGITLNQTGRELEAVMMTMLIYLAISLAISGAMNVYNNRVKLKER 419 >gi|209885182|ref|YP_002289039.1| general L-amino acid transport system permease protein AapQ [Oligotropha carboxidovorans OM5] gi|209873378|gb|ACI93174.1| general L-amino acid transport system permease protein AapQ [Oligotropha carboxidovorans OM5] Length = 401 Score = 259 bits (661), Expect = 7e-67, Method: Compositional matrix adjust. Identities = 157/369 (42%), Positives = 228/369 (61%), Gaps = 23/369 (6%) Query: 30 QIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAI 89 Q++ A LL + V N N++ ++ G GFLS AGF + Q ++ Y+ SY Sbjct: 32 QVVFAALLAWLAYDIVTNAQANLQAQRVASGFGFLSSSAGFGVSQALISYSEADSYFRVF 91 Query: 90 LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 VG +NT ++ G++ AT+IG V RLS N L+A + YVEV RN+P L + F Y Sbjct: 92 EVGLLNTLLVSAIGIVFATVIGFAVAIARLSPNWLLARLAAGYVEVIRNLPLLFQLLFWY 151 Query: 150 KSVLSVLPIPDHSIVLPFGM-FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS 208 +VL+ LP P S+ + FG+ FLNNRG P + + A++F+ + V+ I+ SL ++ Sbjct: 152 LAVLAALPNPRQSLSV-FGVAFLNNRGFVVPQMLAEPGARVFMVAIVVAIIASLAMVIVA 210 Query: 209 RHFHEKTGKALPL----------LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258 R + G+ L + L + + ++FG P + FD PVL FNF G Sbjct: 211 RRRLYRRGERLRIWPFVLVLLIGLPLLSIVLFGAP----------VRFDMPVLRGFNFAG 260 Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G ++ E ++L I+LS YTAAFIAE+VR GL+AVP+GQ EA +LGL+ RLV++PQ Sbjct: 261 GMRITTELVALAISLSTYTAAFIAEVVRGGLLAVPKGQTEAGASLGLSRGAILRLVIIPQ 320 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSL 377 AMR I+PPLT+QYLNL+KNSSLAVA+G+ DL SV GT ++QTGQA+EII + M +YL++ Sbjct: 321 AMRVILPPLTNQYLNLIKNSSLAVAIGYPDLFSVFAGTALSQTGQAVEIIAMTMAVYLAI 380 Query: 378 SIMIALFMN 386 S++ + MN Sbjct: 381 SLVTSAIMN 389 >gi|238794643|ref|ZP_04638249.1| amino-acid ABC transporter permease protein yhdX [Yersinia intermedia ATCC 29909] gi|238726032|gb|EEQ17580.1| amino-acid ABC transporter permease protein yhdX [Yersinia intermedia ATCC 29909] Length = 392 Score = 258 bits (660), Expect = 8e-67, Method: Compositional matrix adjust. Identities = 162/396 (40%), Positives = 230/396 (58%), Gaps = 7/396 (1%) Query: 4 NARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGF 63 + R TV FS L + V QII L+L + +N N+ ++ G F Sbjct: 2 SQRPTVKGAFS----LTNPAVRAWLYQIIALLILIGCGAYLFHNTITNLSTRGITSGFAF 57 Query: 64 LSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK 123 L+ AGF I Q ++ Y +Y LVG +NT ++ + A+I+G +G RLS N Sbjct: 58 LNNSAGFGIVQHLIDYEQGDTYGRVFLVGLLNTLLVSVLCIFFASILGFCLGLARLSDNW 117 Query: 124 LVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGM-FLNNRGLSFPTLT 182 L+ + +Y+E FRNIPPL+ IFF Y +VL LP P S+ FG+ FL+NRGL P+ Sbjct: 118 LLRKLSTIYIETFRNIPPLLQIFFWYFAVLRNLPGPRQSLD-AFGVAFLSNRGLYLPSPE 176 Query: 183 MDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY 242 + + +L ++++L R + TG+ I L+ LP + + Sbjct: 177 FAAGFIPALLAVLLAVIITLALYRYNHFRQLHTGQFHRTWPIGLLLLIALPAVAHLLYGS 236 Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302 LH+D P L FNF GG + PE +L +ALS YT+ FIAE++RSG+ +VP GQ EAA + Sbjct: 237 ALHWDLPQLRGFNFKGGLVLIPELAALTLALSVYTSTFIAEVIRSGIQSVPYGQHEAARS 296 Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTG 361 L L + R V+LPQA+R IIPPLTSQYLN++KNSSLA A+G+ D+VS+ GT++NQTG Sbjct: 297 LALPNTVTLRQVILPQALRVIIPPLTSQYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTG 356 Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 QAIE I I M +YL +S+ I+ MN N +IAL E+ Sbjct: 357 QAIETIAITMSVYLVISLSISFLMNLYNRRIALVER 392 >gi|163848772|ref|YP_001636816.1| polar amino acid ABC transporter inner membrane subunit [Chloroflexus aurantiacus J-10-fl] gi|222526722|ref|YP_002571193.1| polar amino acid ABC transporter inner membrane subunit [Chloroflexus sp. Y-400-fl] gi|163670061|gb|ABY36427.1| polar amino acid ABC transporter, inner membrane subunit [Chloroflexus aurantiacus J-10-fl] gi|222450601|gb|ACM54867.1| polar amino acid ABC transporter, inner membrane subunit [Chloroflexus sp. Y-400-fl] Length = 400 Score = 258 bits (660), Expect = 8e-67, Method: Compositional matrix adjust. Identities = 165/388 (42%), Positives = 237/388 (61%), Gaps = 8/388 (2%) Query: 16 MKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQG 75 + F D R+ I VQ++ A+L+ + + +N+ N + ++NL FLS AGF I + Sbjct: 15 IPFYRDTRIIAIIVQVVFAILVIALVWFLYSNMINGLRQANLLPTFSFLSVPAGFPISES 74 Query: 76 IVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEV 135 ++ Y +Y A +VG +NT +A G+I AT++G ++G RLS N L+ + VYVE+ Sbjct: 75 VIEYDPSMTYGRAFIVGILNTVRVAVIGIILATLLGLILGIARLSDNWLLRNVALVYVEI 134 Query: 136 FRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRG--LSFPTLTMDTNA-KIFVF 192 RN+P L+ + F + S+ + P SI + MFL+NRG L++P D +A ++V+ Sbjct: 135 VRNVPLLLQLIFWF-SLTRLFPRIQESIDVGGLMFLHNRGITLAWPQAGNDFDAWMVWVY 193 Query: 193 S-FVLGIVLSLFATRLSRHFHEKTGKALP--LLYISTFLIFGLPTLVLIALKYQLHFDKP 249 + V+GIV + R+ ++ G ALP LL + G L + + P Sbjct: 194 AGIVIGIVFYV-VRRIQFVRRDRPGVALPYALLIALGVALLGFLVTYLTTGVWPVSLSIP 252 Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309 VL +FNF GG TV+ F +L I L YTA FI EIVRSG++AV +GQ EAA ALGLT + Sbjct: 253 VLQRFNFDGGITVTNSFAALLIGLVIYTAVFIGEIVRSGILAVSKGQREAARALGLTPGQ 312 Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369 RLV+LPQA+R IIPPLTSQYLNL KNSSLA+A+ + DL V TI NQTGQA+ +IL+ Sbjct: 313 TMRLVILPQALRVIIPPLTSQYLNLTKNSSLAIAIAYPDLFYVANTINNQTGQAVPVILM 372 Query: 370 WMFIYLSLSIMIALFMNRLNAKIALKEK 397 M YLS+S++ +LFMN N +I L E+ Sbjct: 373 LMASYLSVSLLTSLFMNWYNRRIQLVER 400 >gi|283836182|ref|ZP_06355923.1| general amino acid ABC transporter, permease protein [Citrobacter youngae ATCC 29220] gi|291067533|gb|EFE05642.1| general amino acid ABC transporter, permease protein [Citrobacter youngae ATCC 29220] Length = 393 Score = 258 bits (659), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 156/369 (42%), Positives = 222/369 (60%), Gaps = 1/369 (0%) Query: 30 QIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAI 89 Q++ + + I ++ ++N NN+ ++ G FL AGF I Q ++ Y +Y Sbjct: 25 QLLAVIAVISIAVYLIHNTINNLSSRGITSGFSFLDRSAGFGIVQHLIDYEQGDTYGRVF 84 Query: 90 LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 LVG +NT ++ ++ A+ +G +G RLS N L+ + VY+E FRNIPPL+ IFF Y Sbjct: 85 LVGLLNTLLVSALCIVFASFLGFFLGLARLSDNWLLRKLSTVYIETFRNIPPLLQIFFWY 144 Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209 +VL LP P ++ MFL+NRGL P M F + ++ I ++ R +R Sbjct: 145 FAVLRNLPGPRQAVNALDLMFLSNRGLYIPAPQMGEGLFAFCTAVLIAIAVTFGLFRFNR 204 Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269 KTG+ + L LP + LH+D P L FNF GG + PE +L Sbjct: 205 MHQIKTGQLRRTWPTALALFMFLPMISQWFFGAALHWDIPELRGFNFRGGMVLIPELAAL 264 Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329 +ALS YT+AFIAEI+R+G+ AVP GQ EAA +LGL + R V++PQA+R IIPPLTS Sbjct: 265 TLALSVYTSAFIAEIIRAGIQAVPYGQHEAARSLGLPNPVTLRQVIIPQALRVIIPPLTS 324 Query: 330 QYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388 QYLN++KNSSLA A+G+ D+VS+ GT++NQTGQAIE I I M +YL +S+ I+L MN Sbjct: 325 QYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAITMSVYLIISLSISLLMNIY 384 Query: 389 NAKIALKEK 397 N +IAL E+ Sbjct: 385 NRRIALIER 393 >gi|300898041|ref|ZP_07116412.1| ABC transporter, permease protein [Escherichia coli MS 198-1] gi|300358260|gb|EFJ74130.1| ABC transporter, permease protein [Escherichia coli MS 198-1] Length = 323 Score = 258 bits (659), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 144/323 (44%), Positives = 207/323 (64%), Gaps = 1/323 (0%) Query: 76 IVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEV 135 ++ Y +Y +VG +NT ++ ++ A+++G +G RLS N L+ + +Y+E+ Sbjct: 1 MIDYQQGDTYGRVFIVGLLNTLLVSALCIVFASVLGFFIGLARLSDNWLLRKLSTIYIEI 60 Query: 136 FRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFV 195 FRNIPPL+ IFF Y +VL LP P ++ FL+NRGL P+ + F+ + V Sbjct: 61 FRNIPPLLQIFFWYFAVLRNLPGPRQAVSAFDLAFLSNRGLYIPSPQLGDGFIAFILAVV 120 Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFN 255 + IVLS+ R ++ + KTG+ I+ LI GLP L LH+D P L FN Sbjct: 121 MAIVLSVGLFRFNKTYQIKTGQLRRTWPIAAVLIIGLPLLAQWLFGAALHWDVPALRGFN 180 Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315 F GG + PE +L +ALS YT+AFIAEI+R+G+ AVP GQ EAA +LGL + R V+ Sbjct: 181 FRGGMVLIPELAALTLALSVYTSAFIAEIIRAGIQAVPYGQHEAARSLGLPNPVTLRQVI 240 Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIY 374 +PQA+R IIPPLTSQYLN++KNSSLA A+G+ D+VS+ GT++NQTGQAIE I + M +Y Sbjct: 241 IPQALRVIIPPLTSQYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAMTMSVY 300 Query: 375 LSLSIMIALFMNRLNAKIALKEK 397 L +S+ I+L MN N +IA+ E+ Sbjct: 301 LIISLTISLLMNIYNRRIAIVER 323 >gi|33596741|ref|NP_884384.1| ABC transporter transmembrane protein [Bordetella parapertussis 12822] gi|33600509|ref|NP_888069.1| ABC transporter transmembrane protein [Bordetella bronchiseptica RB50] gi|33568108|emb|CAE32021.1| Putative ABC transport system, integral membrane protein [Bordetella bronchiseptica RB50] gi|33573442|emb|CAE37427.1| Putative ABC transport system, integral membrane protein [Bordetella parapertussis] Length = 403 Score = 258 bits (659), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 165/385 (42%), Positives = 242/385 (62%), Gaps = 10/385 (2%) Query: 19 LYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVP 78 L+D +V + +Q++LA LL + V+N N++ +N++ G GFL+ AGF+I+Q ++P Sbjct: 23 LHDRKVRGVLLQLLLAALLLWLGYVGVSNAVANLKAANIASGFGFLASTAGFDINQSLIP 82 Query: 79 YT-SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137 Y+ + S+Y A +VG +NT +A G++ AT+IG LVG RLS+N +VA + +YVE R Sbjct: 83 YSGATSTYGDAFVVGLLNTLLVAAIGIVLATLIGFLVGIARLSSNVVVAAVATLYVETLR 142 Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLG 197 N+P L+ IFF Y +VL LP S+ L +FLNNRGL P + +D A + L Sbjct: 143 NLPLLLQIFFWYSAVLVALPAARESLHLADWVFLNNRGLYLPFVNIDGPA----WPLWLV 198 Query: 198 IVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVL----IALKYQLHFDKPVLGQ 253 + L++ L+R + Y + + GL +VL +A+ D P Sbjct: 199 LALAVLGYALARRLALRARLRGGRSYPARTMALGLFVVVLGGGLLAVDPAASLDLPRFRG 258 Query: 254 FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313 F F GG + PE ++L +ALS YTAAFIAEIVR+G+ AV +GQ EAA+ALGL+ R L Sbjct: 259 FGFAGGLRIYPEMVALVVALSTYTAAFIAEIVRAGIGAVGQGQREAAVALGLSPRHTQSL 318 Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMF 372 V+ PQA+R IIPPLTSQ+LNL KNSSLAVA+ + DLV V GT++NQTG+A+EI+ I M Sbjct: 319 VITPQALRVIIPPLTSQFLNLTKNSSLAVAIAYPDLVQVFMGTVLNQTGRAVEIVSITMA 378 Query: 373 IYLSLSIMIALFMNRLNAKIALKEK 397 +YL++S++ + M N ++ L E+ Sbjct: 379 VYLAISLVTSALMGVYNRRVRLVER 403 >gi|87121083|ref|ZP_01076974.1| general amino acid ABC transporter, permease protein [Marinomonas sp. MED121] gi|86163575|gb|EAQ64849.1| general amino acid ABC transporter, permease protein [Marinomonas sp. MED121] Length = 391 Score = 257 bits (657), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 153/354 (43%), Positives = 218/354 (61%), Gaps = 4/354 (1%) Query: 46 NNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMI 105 +N+ N+ +S G FL++ AGF + ++ YT +Y A +V +NT ++ G+I Sbjct: 40 SNLQANLANQGISTGFEFLNQPAGFPVLIHLIEYTEADTYGRAFIVALINTIVISLMGII 99 Query: 106 PATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVL 165 AT+IG ++G RLS N LVA + VYVE RNIP L+ +FF Y +VL+ LPIP +SI+ Sbjct: 100 LATVIGVVMGLARLSNNWLVARLATVYVETLRNIPLLLQMFFWYFAVLATLPIPKNSII- 158 Query: 166 PFG-MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224 FG FLN RG+ P + FV+ I+ S+ ++ TG P + Sbjct: 159 -FGDFFLNKRGIYSPNPLFQEGFGFVIAGFVISIIASIALIVWAKRRQTITGLWFPAYWA 217 Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284 S LI + L L + + FD P +FN GG + PEF+++ +ALS YT AFIAEI Sbjct: 218 SLGLIVVITFLALAISGFPIEFDLPQKSRFNVTGGMVLPPEFVAVLVALSTYTGAFIAEI 277 Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344 VR+G+++V GQ EAA +LGL RL++LPQA+R IIPPLTSQ+LNL KNSSL A+ Sbjct: 278 VRAGILSVNWGQTEAARSLGLKDSLTQRLIVLPQALRVIIPPLTSQFLNLAKNSSLGAAI 337 Query: 345 GFADLVS-VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 + +LV+ V GT +NQTGQAIE I + M +Y +LS+ I++FMN N K++L E+ Sbjct: 338 AYPELVAVVMGTTLNQTGQAIENIGLCMLVYGTLSLTISIFMNWYNKKMSLTER 391 >gi|253686634|ref|YP_003015824.1| polar amino acid ABC transporter, inner membrane subunit [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251753212|gb|ACT11288.1| polar amino acid ABC transporter, inner membrane subunit [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 392 Score = 257 bits (656), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 156/359 (43%), Positives = 222/359 (61%), Gaps = 7/359 (1%) Query: 43 WCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFS 102 + ++N N+ + ++ G FL++ AGF I Q ++ Y +YA LVG NT ++ Sbjct: 37 YLLHNTVTNLAQRGITSGFDFLNKSAGFGIVQHLIDYQQGDTYARVFLVGLFNTLLVSAL 96 Query: 103 GMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHS 162 ++ A+I+G +G RLS N L+ I +Y+E+FRNIPPL+ IFF Y +VL LP P S Sbjct: 97 CIVFASILGFTIGLARLSDNWLLRKISNIYIEIFRNIPPLLQIFFWYFAVLRNLPGPRQS 156 Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTG---KAL 219 I FL+NRG P+ + A F S ++ +V++ R ++ +H TG + Sbjct: 157 ISAFDVAFLSNRGFYLPSPELGPGAAAFFLSLIITLVVTWGVFRRNQRYHALTGQPRRTW 216 Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279 PL + L L+ A H+D P L FNF GG + PE +L +ALS YT++ Sbjct: 217 PLALGLLLGLCALSHLIFGA---AFHWDMPELKGFNFRGGMVLIPELAALTVALSVYTSS 273 Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339 FIAEI+RSG+ +V GQ EAA +LGL + R V+LPQA+R IIPPLTSQYLN++KNSS Sbjct: 274 FIAEIIRSGIQSVSHGQHEAARSLGLPNPVTLRKVILPQALRVIIPPLTSQYLNIVKNSS 333 Query: 340 LAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 LA A+G+ D+VS+ GT++NQTGQAIE I I M +YL +S++I+L MN N KIAL E+ Sbjct: 334 LAAAIGYPDMVSLFAGTVLNQTGQAIETIAITMSVYLIISLLISLLMNLYNRKIALVER 392 >gi|330814053|ref|YP_004358292.1| glutamate Aspartate transport system permease protein GltJ [Candidatus Pelagibacter sp. IMCC9063] gi|327487148|gb|AEA81553.1| glutamate Aspartate transport system permease protein GltJ [Candidatus Pelagibacter sp. IMCC9063] Length = 398 Score = 257 bits (656), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 145/356 (40%), Positives = 219/356 (61%), Gaps = 6/356 (1%) Query: 47 NVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIP 106 N NM + G GFL+ +A F+I ++ + S+ SYA A LVG +NT ++ G+ Sbjct: 44 NASTNMAARGIETGFGFLANKASFDIQFSLIDFDSNDSYARAYLVGLLNTLLVSGIGIFF 103 Query: 107 ATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLP 166 AT+IG VG RLS+N L + + Y+E+FRNIP L+ IFF Y ++L +LP D+S++L Sbjct: 104 ATVIGFFVGVTRLSSNILASKVAEAYIEIFRNIPLLLQIFFWYFAILRLLPSSDNSLILF 163 Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226 +F N +G+ P + N FV+ F+ I+ S+ EKTG +P S Sbjct: 164 NFVFANIKGIYVPRFVWE-NLNHFVYGFLFSILAIYLFVSFSKKKQEKTGVQVPTFTTSL 222 Query: 227 FLIFGLPTLVLIALKYQLHFDKPVL----GQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282 + F + +V+ L PVL G +N++GG +V PE ++L +LS YT+ FIA Sbjct: 223 VIFFTINFIVIYFGNVGLSLSYPVLETNRGLYNYMGGVSVIPELIALAFSLSLYTSTFIA 282 Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342 E VR+G++ + +GQ EAA ++GL+ + +L+++PQA+R IIPP+T+QYLNL KNSSLA Sbjct: 283 ECVRAGILGIDKGQKEAAASIGLSKGQILKLIVIPQALRIIIPPVTNQYLNLTKNSSLAA 342 Query: 343 AVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 A+ + D+V V GT + QTG+AIEI+ I M YL+LS+ I+L MN N K ++ E+ Sbjct: 343 AIAYPDIVLVFAGTALMQTGKAIEIVSITMLTYLTLSVSISLLMNWYNKKNSIVER 398 >gi|227114000|ref|ZP_03827656.1| L-amino acid ABC transporter permease protein [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 392 Score = 256 bits (655), Expect = 3e-66, Method: Compositional matrix adjust. Identities = 160/366 (43%), Positives = 223/366 (60%), Gaps = 21/366 (5%) Query: 43 WCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFS 102 + ++N N+ + ++ G FL++ AGF I Q ++ Y +YA LVG NT ++ Sbjct: 37 YLLHNTVTNLSQRGITSGFDFLNKSAGFGIVQHLIDYQQGDTYARIFLVGLFNTLLVSAL 96 Query: 103 GMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHS 162 ++ A+I+G VG RLS N L+ I VY+E+FRNIPPL+ IFF Y +VL LP P S Sbjct: 97 CIVFASILGFTVGLARLSDNWLLRKISNVYIEIFRNIPPLLQIFFWYFAVLRNLPGPRQS 156 Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTG---KAL 219 I FL+NRG P+ A F S ++ +V++ R ++ +H TG + Sbjct: 157 ISAFDVAFLSNRGFYLPSPEWGPGAAAFFLSLIITLVVTWGVFRRNQRYHASTGQPRRTW 216 Query: 220 P-------LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIA 272 P +L + LIFG P H+D P L FNF GG + PE +L +A Sbjct: 217 PLTLGLLLVLCALSHLIFG-PA---------FHWDMPELKGFNFRGGMVLIPELAALTVA 266 Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 LS YT++FIAEI+RSG+ +V GQ EAA +LGL + R V+LPQA+R IIPPLTSQYL Sbjct: 267 LSVYTSSFIAEIIRSGIQSVSHGQHEAARSLGLPNPVTLRKVILPQALRVIIPPLTSQYL 326 Query: 333 NLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 N++KNSSLA A+G+ D+VS+ GT++NQTGQAIE I I M +YL +S++I+L MN N K Sbjct: 327 NIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAITMSVYLIISLLISLLMNLYNRK 386 Query: 392 IALKEK 397 IAL E+ Sbjct: 387 IALVER 392 >gi|90424049|ref|YP_532419.1| amino acid ABC transporter permease [Rhodopseudomonas palustris BisB18] gi|90106063|gb|ABD88100.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Rhodopseudomonas palustris BisB18] Length = 401 Score = 256 bits (654), Expect = 4e-66, Method: Compositional matrix adjust. Identities = 164/389 (42%), Positives = 236/389 (60%), Gaps = 3/389 (0%) Query: 1 MIKNARKTVTRYFSRMKFLYDMRVH--NISVQIILALLLTVIFLWCVNNVYNNMEKSNLS 58 M AR T++ +R++ L R + +Q++ L + V+N N+ ++ Sbjct: 1 MAIEARPPPTQFVARLRRLLGGRAGWGGLLLQVLFVAALVWVAYEIVDNARGNLANQRIA 60 Query: 59 LGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGR 118 G GF+S+ AGF + Q ++PY+ SY LVG VNT ++ G+I ATIIG +V GR Sbjct: 61 SGFGFMSQTAGFGVSQALIPYSEADSYTRVFLVGLVNTLVVSIIGIIFATIIGFMVALGR 120 Query: 119 LSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSF 178 LS N L++ I YVE+ RN+P L I F Y +VL LP P S+ + FL+NRG+ Sbjct: 121 LSPNWLLSKISGGYVELVRNLPLLFQILFWYLAVLGTLPSPRQSVSVFDAFFLSNRGIVV 180 Query: 179 PTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLI 238 P + F+ + + I +++ +R +TGK + + + L+ GLP L + Sbjct: 181 PKPVGEAGLDAFLIAVAVAIAIAMMLPAYARRRLFQTGKPMKVWPFALSLLIGLPLLATL 240 Query: 239 ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQME 298 F+ P L FNF GGS V+PEF++L +ALS YTAAFIAEIVR+G+ +V +GQME Sbjct: 241 IFGKPFSFEIPALKGFNFAGGSRVAPEFVALTLALSTYTAAFIAEIVRAGIQSVHKGQME 300 Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTII 357 A +LGL+ RLV++PQA+R I+PPLT+QYLNL KNSSLAVA+G+ DL SV GT + Sbjct: 301 AGASLGLSRGSTLRLVVVPQALRVILPPLTNQYLNLTKNSSLAVAIGYPDLFSVFAGTTL 360 Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMN 386 +QTGQAIEII I M +YL +SI+ + M+ Sbjct: 361 SQTGQAIEIIAITMSVYLLISIVTSALMS 389 >gi|254463663|ref|ZP_05077074.1| amino acid ABC transporter, permease protein [Rhodobacterales bacterium Y4I] gi|206684571|gb|EDZ45053.1| amino acid ABC transporter, permease protein [Rhodobacterales bacterium Y4I] Length = 389 Score = 256 bits (654), Expect = 4e-66, Method: Compositional matrix adjust. Identities = 149/370 (40%), Positives = 229/370 (61%), Gaps = 4/370 (1%) Query: 28 SVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYAT 87 V +++ +L V+F +N N+ + G FL AG I ++ Y+ SY Sbjct: 24 GVLVVVIAILYVLF----SNTQENLAIRGIESGFAFLGHEAGLPIGDSLIDYSPTRSYGY 79 Query: 88 AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147 A LVG +NT +++ ++ +T++G ++G R+S N L+A +YVE RN+P L+ +FF Sbjct: 80 AFLVGILNTLFVSVLAIVFSTLLGIVIGVARVSRNWLLARGAAIYVETLRNLPLLLTLFF 139 Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRL 207 +Y VL+ LP P +I L G+FL+ RG P + +F+ + + +VL++ R Sbjct: 140 IYTVVLAALPHPRDAIALSDGVFLSKRGFYLPRPVAEDGIGLFLGASAVALVLAVMFWRW 199 Query: 208 SRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFM 267 ++ + +TG+++ L + + L L +A L + PV FNF GG ++ PEF Sbjct: 200 AKSYKVRTGRSVSGLRGALAIFLALSGLAFLASGQPLTSELPVYQGFNFKGGLSIKPEFA 259 Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327 SL I L YTAA++AE VRSG+ +V GQ+EAA ALG++ TR+VLLPQA+R IP Sbjct: 260 SLLIGLVLYTAAYVAENVRSGIQSVHAGQIEAANALGVSSGVVTRMVLLPQALRVTIPAT 319 Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387 T+ Y +L+KNSSLAVA+G+ D+VSVGGTII Q GQAIEII +WM +YL+++++I+L MN Sbjct: 320 TNDYASLVKNSSLAVAIGYPDMVSVGGTIIGQNGQAIEIIAMWMAVYLTINLIISLGMNM 379 Query: 388 LNAKIALKEK 397 LNA++ L E+ Sbjct: 380 LNARVQLVER 389 >gi|119383546|ref|YP_914602.1| polar amino acid ABC transporter, inner membrane subunit [Paracoccus denitrificans PD1222] gi|119373313|gb|ABL68906.1| L-asparagine ABC transporter membrane protein / L-glutamine ABC transporter membrane protein / L-glutamate ABC transporter membrane protein / L-aspartate ABC transporter membrane protein [Paracoccus denitrificans PD1222] Length = 417 Score = 256 bits (654), Expect = 5e-66, Method: Compositional matrix adjust. Identities = 162/408 (39%), Positives = 240/408 (58%), Gaps = 35/408 (8%) Query: 18 FLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIV 77 +YD R ++++Q I+ +L+ + W ++N N+ +L FL RAG++I Q ++ Sbjct: 17 LIYDRRYRSLTLQAIVFILVMLAASWLIDNTLRNLSAMGKTLSFDFLFRRAGYDIPQQLI 76 Query: 78 PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137 PY SD ++ A ++G +NT ++ G I ATI+G +VG RLS+N L+A + VYVEVFR Sbjct: 77 PYNSDDTHLRATVIGLLNTLLVSILGCIAATILGVIVGVLRLSSNWLIARLMTVYVEVFR 136 Query: 138 NIPPLVVIFFLYKSVLSVLPIPDH-------SIVLPFGMFL-NNRGLSFPTLTMDTNAKI 189 NIP L+ I V+P P+ + ++ F M NR + P++ M TN Sbjct: 137 NIPLLLWILVCLAIFTEVMPPPNAYRGENPAANMILFDMIAPTNRYTAIPSIGM-TNPPG 195 Query: 190 FVFSFVLGI-------------------VLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230 + GI VL +A R+ ++TGK P + + +F Sbjct: 196 TISLGREGISWAFIAFAVVIAAAWTGWRVLRNWAQRV----QDRTGKR-PRTWWISLAMF 250 Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290 +P L L + LH PVL FNF G + F+ L++AL+ YT AFIAEIVR+G++ Sbjct: 251 VVPVLFL-TWYFGLHLVPPVLRGFNFADGINLDNAFVVLWLALTLYTGAFIAEIVRAGIL 309 Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 AV RGQ EAA ALGL R+ LV+LPQA+R I+PPL SQYLNL KNSSLA+AVG+ DL Sbjct: 310 AVSRGQTEAAFALGLRPRRTMSLVVLPQALRVIVPPLISQYLNLTKNSSLAIAVGYMDLR 369 Query: 351 -SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 ++GGT +NQTG+ +E +++ M IYL+LS++I+ MN N+++ LKE+ Sbjct: 370 GTLGGTTLNQTGREMEAMVLMMGIYLALSLIISAGMNIFNSRVKLKER 417 >gi|260596109|ref|YP_003208680.1| putative amino-acid ABC transporter permease yhdX [Cronobacter turicensis z3032] gi|260215286|emb|CBA27217.1| Putative amino-acid ABC transporter permease protein yhdX [Cronobacter turicensis z3032] Length = 393 Score = 256 bits (653), Expect = 6e-66, Method: Compositional matrix adjust. Identities = 159/369 (43%), Positives = 223/369 (60%), Gaps = 1/369 (0%) Query: 30 QIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAI 89 QI+ ++ I + ++N N+ ++ G FL AGF I Q ++ Y +Y Sbjct: 25 QIVAIAVVLGIAAYLIHNTITNLNSRGITSGFAFLDRSAGFGIVQHLIDYQEGDTYGRVF 84 Query: 90 LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 LVG +NT ++ ++ A+ +G +G RLS N L+ + VY+E FRNIPPL+ IFF Y Sbjct: 85 LVGLMNTLLVSALCIVFASFLGFFIGLARLSDNWLLRKLSTVYIETFRNIPPLLQIFFWY 144 Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209 +VL LP P ++ FL+NRGL P+ A FV + V+ + LS R ++ Sbjct: 145 FAVLRNLPGPRQAVSAFDLAFLSNRGLYLPSPEAGEGALAFVAALVIALTLSAGLYRFNK 204 Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269 KTG+ LI LP L +A L +D P L FNF GG + PE +L Sbjct: 205 KHQMKTGQLRRTWPTLLLLIIVLPLLAHLAFGPALRWDVPALRGFNFRGGLALIPELAAL 264 Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329 +ALS YT+AFIAEI+R+G+++VP GQ EAA +LGL + R V++PQAMR IIPPLTS Sbjct: 265 TLALSVYTSAFIAEIIRAGILSVPYGQHEAARSLGLPNPVTLRQVIIPQAMRVIIPPLTS 324 Query: 330 QYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388 QYLN++KNSSLA A+G+ D+VS+ GT++NQTGQAIE I I M +YL +S+ I+L MN Sbjct: 325 QYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAITMSVYLIISLSISLLMNLY 384 Query: 389 NAKIALKEK 397 N +IAL E+ Sbjct: 385 NRRIALVER 393 >gi|261342746|ref|ZP_05970604.1| general amino acid ABC transporter, permease protein [Enterobacter cancerogenus ATCC 35316] gi|288315399|gb|EFC54337.1| general amino acid ABC transporter, permease protein [Enterobacter cancerogenus ATCC 35316] Length = 393 Score = 256 bits (653), Expect = 6e-66, Method: Compositional matrix adjust. Identities = 153/356 (42%), Positives = 216/356 (60%), Gaps = 1/356 (0%) Query: 43 WCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFS 102 + ++N N+ ++ G FL AGF I Q ++ Y +Y +VG +NT ++ Sbjct: 38 YLIHNTVTNLNNRGITSGFAFLDRSAGFGIVQHLIDYQEGDTYGRVFVVGLLNTLLVSAL 97 Query: 103 GMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHS 162 ++ A+++G +G RLS N L+ + Y+E FRNIPPL+ IFF Y +VL LP P + Sbjct: 98 CIVFASLLGFFIGLARLSDNWLLRKLSTFYIETFRNIPPLLQIFFWYFAVLRNLPGPRQA 157 Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222 + +FL+NRGL P+ FV + L +V+S R +R KTG+ Sbjct: 158 VDAFDLLFLSNRGLYIPSPQFAEGIYAFVIAIALALVISGGLFRYNRKHQVKTGQLRKTW 217 Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282 + LI LP LH+D P L FNF GG + PE +L +ALS YT+AFIA Sbjct: 218 PFALALIVVLPWAARGLFGAALHWDVPHLRGFNFQGGMVLIPELAALTLALSIYTSAFIA 277 Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342 EI+R+G+ AVP GQ EAA +LGL + R V++PQA+R IIPPLTSQYLN++KNSSLA Sbjct: 278 EIIRAGIQAVPYGQHEAARSLGLPNTVTLRQVIIPQALRVIIPPLTSQYLNIVKNSSLAA 337 Query: 343 AVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 A+G+ D+VS+ GT++NQTGQAIE I I M +YL +S++I+L MN N +IAL E+ Sbjct: 338 AIGYPDMVSLFAGTVLNQTGQAIETIAITMSVYLIISLIISLLMNLYNRRIALVER 393 >gi|271498819|ref|YP_003331844.1| polar amino acid ABC transporter inner membrane subunit [Dickeya dadantii Ech586] gi|270342374|gb|ACZ75139.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya dadantii Ech586] Length = 392 Score = 255 bits (651), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 158/374 (42%), Positives = 234/374 (62%), Gaps = 11/374 (2%) Query: 30 QIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAI 89 QI+ +++ V + ++N N+ + ++ G FL+ AGF I Q ++ Y D +YA Sbjct: 24 QILAVIIVVVAAAYLLHNTVTNLSQRGITSGFAFLNNNAGFGIVQHLIDYDQDDTYARVF 83 Query: 90 LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 ++G +NT ++ +I A+++G +VG RLS N L+ + +Y+E FRNIPPL+ IFF Y Sbjct: 84 VIGLLNTLLVSAICIICASLLGFIVGLARLSDNWLLRKLSTIYIETFRNIPPLLQIFFWY 143 Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209 +VL LP P ++ FL+NRGL P A + + ++ + ++ R ++ Sbjct: 144 FAVLRNLPGPRQAVNAFDTFFLSNRGLYIPAAEFGPGALPSLLALLISLGCAIALHRRNK 203 Query: 210 HFHEKTGKA-----LPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP 264 +HE TG+ +P+ ++ L GL LV LH+D PVL FNF GG + P Sbjct: 204 RYHELTGQQRRYWPIPIAMLAVLL--GLSHLVF---GRALHWDFPVLKGFNFSGGMVLIP 258 Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 E +L +ALS YT++FIAEI+RSG+ +V GQ EAA++LGL R V+LPQA+R II Sbjct: 259 ELAALALALSVYTSSFIAEIIRSGIQSVSHGQHEAALSLGLPKPVTLRKVILPQALRVII 318 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 PPLTSQYLN++KNSSLA A+G+ D+VS+ GT++NQTGQAIE I I M +YL +S++I+L Sbjct: 319 PPLTSQYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAITMSVYLIISLLISL 378 Query: 384 FMNRLNAKIALKEK 397 MN N KIAL E+ Sbjct: 379 LMNIYNRKIALIER 392 >gi|294675893|ref|YP_003576508.1| glutamate/aspartate ABC transporter permease BztB [Rhodobacter capsulatus SB 1003] gi|3182935|sp|Q52664|BZTB_RHOCA RecName: Full=Glutamate/glutamine/aspartate/asparagine transport system permease protein BztB gi|1655713|gb|AAB17887.1| BztB [Rhodobacter capsulatus SB 1003] gi|294474713|gb|ADE84101.1| glutamate/aspartate ABC transporter, permease protein BztB [Rhodobacter capsulatus SB 1003] Length = 426 Score = 255 bits (651), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 154/412 (37%), Positives = 229/412 (55%), Gaps = 34/412 (8%) Query: 18 FLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIV 77 +YD R +I++QI++ LL +W +NN Y N+E FL RAG+++ Q ++ Sbjct: 17 LIYDTRFRSITIQIVVLLLFLAGLVWLLNNAYVNLEAKGKDFNFSFLWTRAGYDLAQTLI 76 Query: 78 PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137 PY++D ++ A++ G +NT ++ G I ATI+GT++G RLS N LVA I VYVE FR Sbjct: 77 PYSNDDTHFRALIEGLLNTLLVSVLGCILATILGTIIGVLRLSQNWLVARIMTVYVETFR 136 Query: 138 NIPPLVVIFFLYKSVLSVLPIPDH----------------SIVLPFGMFLNNRGLSFPTL 181 NIP L+ I + + P+P S+ + + NRG + P Sbjct: 137 NIPLLLWILLMGTILAETRPVPKDFRLTEAMKAAGEEPKASMWFFDSVAVTNRGTNLPAP 196 Query: 182 TMDTNAKIFVFSFVLGIVLSLFA---------------TRLSRHFHEKTGKALPLLYIST 226 D + + + L + L+ A ++ E TG + S Sbjct: 197 AFDHSLGVVDLGWNLPVSLNALAILAVMSASFWGWRRFMARAKAVQEATGTRPTTWWPSL 256 Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286 ++F + +L L + H D P + +F+F GG + F +L IAL+ YTAAFIAEIVR Sbjct: 257 LILFAPISALLYGLGF--HLDYPQITKFDFTGGFQMLHSFTALLIALTLYTAAFIAEIVR 314 Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346 +G+ A+ RGQ EAA ALGL + LV+LPQA+R I+PPL SQ+LNL KNSSLA+AV + Sbjct: 315 AGIQAISRGQTEAAYALGLRPGRTMSLVILPQALRVIVPPLISQFLNLTKNSSLAIAVSY 374 Query: 347 ADLV-SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 DL ++GG +NQTG+ +E +L+ M IYL++S+ I+ MN N I LKE+ Sbjct: 375 MDLRGTLGGITLNQTGRELECMLLMMLIYLTISLTISSLMNLYNKSIKLKER 426 >gi|300718663|ref|YP_003743466.1| L-amino acid ABC transporter, permease protein [Erwinia billingiae Eb661] gi|299064499|emb|CAX61619.1| L-amino acid ABC transporter, permease protein [Erwinia billingiae Eb661] Length = 392 Score = 254 bits (650), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 159/395 (40%), Positives = 232/395 (58%), Gaps = 5/395 (1%) Query: 4 NARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGF 63 + R TV R FS + V QII +++ + + V+N N+ ++ G GF Sbjct: 2 SQRPTVKRDFS----FSNPAVRAWLYQIIAIVVVLGVAGYLVHNTVINLASRGITSGFGF 57 Query: 64 LSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK 123 L AGF I Q ++ Y+ +YA LVG NT ++ ++ A+++G +G RLS N Sbjct: 58 LERSAGFGIVQHLIDYSEGDTYARVFLVGLTNTLLVSALCIVFASLLGFFIGLSRLSDNW 117 Query: 124 LVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTM 183 L+ I +Y+E FRNIPPL+ IFF Y +VL LP P + F++NRGL P Sbjct: 118 LLRKISTIYIETFRNIPPLLQIFFWYFAVLRNLPGPRQAASAFDLAFVSNRGLYIPWPQY 177 Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243 FV + ++ + ++ R +R + KTG+ S ++ P + + Sbjct: 178 AVGTWPFVIALLVAVAGTVALFRYNRTYQLKTGQLRRTWPASVAMVIIFPVIAHLTFGAA 237 Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 +H+D P L FNF GG + PE +L +ALS YT+ FIAE++RSG+ +VP GQ EAA +L Sbjct: 238 MHWDIPQLRGFNFRGGFALIPELAALTLALSIYTSTFIAEVIRSGIQSVPYGQHEAARSL 297 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQ 362 G+ + R V++PQAMR IIPPLTSQYLN++KNSSLA A+G+ D+VS+ GT++NQTGQ Sbjct: 298 GIPNPVTLRQVIIPQAMRVIIPPLTSQYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQ 357 Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 AIE I I M +YL +S++I+L MN N KI L E+ Sbjct: 358 AIETIAITMGVYLVISLLISLLMNIYNRKIRLIER 392 >gi|156935789|ref|YP_001439705.1| hypothetical protein ESA_03660 [Cronobacter sakazakii ATCC BAA-894] gi|156534043|gb|ABU78869.1| hypothetical protein ESA_03660 [Cronobacter sakazakii ATCC BAA-894] Length = 393 Score = 254 bits (650), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 159/379 (41%), Positives = 226/379 (59%), Gaps = 21/379 (5%) Query: 30 QIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAI 89 QI+ ++ I + ++N N+ ++ G FL AGF I Q ++ Y +Y Sbjct: 25 QIVAIAVVLGIAAYLIHNTITNLNNRGITSGFAFLDRSAGFGIVQHLIDYQEGDTYGRVF 84 Query: 90 LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 LVG +NT ++ ++ A+ +G +G RLS N L+ + +Y+E FRNIPPL+ IFF Y Sbjct: 85 LVGLMNTLLVSTLCIVFASFLGFFIGLARLSDNWLLRKLSTIYIETFRNIPPLLQIFFWY 144 Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209 +VL LP P ++ FL+NRGL P+ A FV + V+ + LS R ++ Sbjct: 145 FAVLRNLPGPRQAVSAFDLAFLSNRGLYLPSPEAGEGALAFVAALVIALALSAGLYRFNK 204 Query: 210 HFHEKTGK----------ALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGG 259 KTG+ + +L + LIFG P L +D PVL FNF GG Sbjct: 205 KHQMKTGQLRRTWPSLLLLIVVLPLLAHLIFG-PAL---------RWDVPVLRGFNFRGG 254 Query: 260 STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319 + PE +L +ALS YT+AFIAEI+R+G+++VP GQ EAA +LGL + R V++PQA Sbjct: 255 LALIPELAALTLALSVYTSAFIAEIIRAGILSVPHGQHEAARSLGLPNPVTLRQVIIPQA 314 Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLS 378 MR IIPPLTSQYLN++KNSSLA A+G+ D+VS+ GT++NQTGQAIE I I M +YL +S Sbjct: 315 MRVIIPPLTSQYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAITMSVYLIIS 374 Query: 379 IMIALFMNRLNAKIALKEK 397 + I+L MN N +IAL E+ Sbjct: 375 LSISLLMNLYNQRIALVER 393 >gi|50119204|ref|YP_048371.1| L-amino acid ABC transporter permease [Pectobacterium atrosepticum SCRI1043] gi|49609730|emb|CAG73164.1| L-amino acid ABC transporter permease protein [Pectobacterium atrosepticum SCRI1043] Length = 392 Score = 254 bits (650), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 154/369 (41%), Positives = 228/369 (61%), Gaps = 1/369 (0%) Query: 30 QIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAI 89 QI++ + + + + ++N N+ + ++ G FL++ AGF I Q ++ Y +YA Sbjct: 24 QIVVVIAVLSVAAYLLHNTVTNLSQRGITSGFDFLNKSAGFGIVQHLIDYQQGDTYARVF 83 Query: 90 LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 LVG NT ++ ++ A+I+G +G RLS N L+ I +Y+E+FRNIPPL+ IFF Y Sbjct: 84 LVGLFNTLLVSALCIVFASILGFTIGLARLSDNWLLRKISNIYIEIFRNIPPLLQIFFWY 143 Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209 +VL LP P SI FL+NRG P+ M F S ++ +V++ R ++ Sbjct: 144 FAVLRNLPGPRQSISAFDIAFLSNRGFYLPSPEMGPGTAAFFLSLLITLVVTWSVFRRNQ 203 Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269 +H TG+ ++ L+ L L + H++ P L FNF GG + PE +L Sbjct: 204 RYHALTGQVRRTWPLTLGLLLILCALSHLVFGPAFHWNVPELKGFNFRGGMVLIPELAAL 263 Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329 +ALS YT++FIAEI+RSG+ +V GQ EAA +LGL + R V+LPQA+R IIPPLTS Sbjct: 264 TVALSVYTSSFIAEIIRSGIQSVSHGQHEAARSLGLPNPVTLRKVILPQALRVIIPPLTS 323 Query: 330 QYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388 QYLN++KNSSLA A+G+ D+VS+ GT++NQTGQAIE I I M +YL +S++I+L MN Sbjct: 324 QYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAITMSVYLIISLLISLLMNLY 383 Query: 389 NAKIALKEK 397 N +IAL E+ Sbjct: 384 NRRIALVER 392 >gi|294084020|ref|YP_003550777.1| glutamate/glutamine/aspartate/asparagine transport system permease [Candidatus Puniceispirillum marinum IMCC1322] gi|292663592|gb|ADE38693.1| glutamate/glutamine/aspartate/asparagine transport system permease protein [Candidatus Puniceispirillum marinum IMCC1322] Length = 395 Score = 254 bits (650), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 145/394 (36%), Positives = 237/394 (60%), Gaps = 2/394 (0%) Query: 6 RKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLS 65 + T FS + Y+ V ++++QII ++ + NV N+ L + FL Sbjct: 2 HQNSTTDFSLRRLFYNQEVRSVAIQIITLAVICYLVFSIGQNVLVNLAAIGKDLSMNFLW 61 Query: 66 ERAGFEID-QGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKL 124 AG++I Q V Y ++ A LVG NT +A +G+I ATI+G +G RLS N L Sbjct: 62 VPAGYDITFQPFVDYGPTDTHFRAALVGLSNTLLVAVTGIILATILGFTLGVMRLSNNFL 121 Query: 125 VAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMD 184 V+ + +++++ RN+P L+ IFF+Y ++++LP+P + + ++ NRG+ P T++ Sbjct: 122 VSKLSQIFIDFTRNVPVLLHIFFIYGVIINLLPVPKKAEAISGVFYMTNRGIFAPAPTLE 181 Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244 + V +F++ + + +++ KTGK PL + LI LP L + + + Sbjct: 182 QGYEFVVGAFLIAVAGCFVLAKWAKNRQMKTGKIFPLFWTCLALIIALPVLTNMMIGGAI 241 Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304 + P L FNF GG + PE+++L+ ALS YTA+FIAEIVR G++A+ +GQ EAA ALG Sbjct: 242 GVEVPKLKGFNFKGGLILRPEYVALWFALSYYTASFIAEIVRGGILAIHKGQKEAAHALG 301 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV-SVGGTIINQTGQA 363 ++ + RLV++PQA+ IIPP+ S YLNL KNSSLA+A+G+ D+V ++GG + QTG+ Sbjct: 302 ISPTRTLRLVIIPQALPLIIPPIASNYLNLTKNSSLAIAIGYFDIVATLGGISLMQTGKE 361 Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 +E + + + YL LS++I+ MN LN ++ALK + Sbjct: 362 VETMSLVLLTYLCLSLIISGAMNYLNHRVALKAR 395 >gi|56695434|ref|YP_165782.1| glutamate/glutamine/aspartate/asparagine ABC transporter, permease protein [Ruegeria pomeroyi DSS-3] gi|56677171|gb|AAV93837.1| glutamate/glutamine/aspartate/asparagine ABC transporter, permease protein [Ruegeria pomeroyi DSS-3] Length = 422 Score = 254 bits (649), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 154/409 (37%), Positives = 236/409 (57%), Gaps = 32/409 (7%) Query: 18 FLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIV 77 LYD R + ++Q+I + ++ W ++N N+ + GF SE A ++I+Q ++ Sbjct: 17 LLYDTRYRSATIQVIAMIGFMLLAAWLISNTAQNLAALGKPIDFGFFSEPASYDINQRLL 76 Query: 78 PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137 Y+S ++ A +G +NT +A G I AT++G ++G RLS N +VA + +YVE FR Sbjct: 77 DYSSRDTHLRAAFIGLLNTLVVAVLGCITATVLGVIIGVLRLSNNWIVARLMTIYVEGFR 136 Query: 138 NIPPLVVIFFLYKSVLSVLPIP--------DHSIVLPFGMFLNNRGLSFP---------- 179 N+P L+ I F+ ++ LP P S++L + + NRG+ P Sbjct: 137 NVPVLLWIVFIMAILIETLPAPRAFRGDDATASMMLNDSVAVTNRGVYIPDALFSNSLGN 196 Query: 180 -------TLTMDTNAKIFVFSFVLG--IVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230 +L D + + + VLG + +S F + + E+TG P+ + + Sbjct: 197 VHLFGESSLRFDISLDLMLILIVLGGSLWVSNFLRKRADRIQEQTGDR-PVTWWQRLAVV 255 Query: 231 GLPT-LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289 LPT LVL+ L + H P L FNF GG+ + ++L++ALS YTAAFIAEIVR+G+ Sbjct: 256 VLPTGLVLVLLGF--HLGYPELKGFNFQGGTHLRNSLIALWLALSLYTAAFIAEIVRAGI 313 Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349 +A+ +GQ EAA ALGL K LV+LPQA+R IIPPL S YLNL KNSSLA+AVG+ D+ Sbjct: 314 LAISKGQTEAASALGLRSNKIMSLVILPQALRVIIPPLISNYLNLTKNSSLAIAVGYMDI 373 Query: 350 V-SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 ++GG +NQTG+ +E IL+ M +YL++S+ I+ MN N + LKE+ Sbjct: 374 TGTLGGITMNQTGRELETILLLMLVYLTISLSISAVMNWYNESVKLKER 422 >gi|311277769|ref|YP_003940000.1| polar amino acid ABC transporter, inner membrane subunit [Enterobacter cloacae SCF1] gi|308746964|gb|ADO46716.1| polar amino acid ABC transporter, inner membrane subunit [Enterobacter cloacae SCF1] Length = 393 Score = 254 bits (648), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 155/369 (42%), Positives = 227/369 (61%), Gaps = 1/369 (0%) Query: 30 QIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAI 89 QI+ + + I ++ ++N N+ ++ G FL AGF I Q ++ Y +Y Sbjct: 25 QIVAVVAIASIVIYLIHNTITNLNNRGITSGFAFLDRSAGFGIVQHLIDYQEGDTYGRVF 84 Query: 90 LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 +VG +NT ++ ++ A+IIG +G RLS N L+ + +Y+EVFRNIPPL+ IFF Y Sbjct: 85 VVGLLNTLLVSALCIVFASIIGFFLGLARLSENWLLRKLSTLYIEVFRNIPPLLQIFFWY 144 Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209 +VL LP P ++ ++L+NRGL P + F + +L IV+S+ R ++ Sbjct: 145 FAVLRNLPGPRQAVDAFDLVYLSNRGLYIPAPQLGEGLLAFTGAVLLAIVISIGLYRYNQ 204 Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269 KTG+ + L+ LP L +H+D P L FNF+GG + PE +L Sbjct: 205 THQIKTGQLRRTWPTALGLLIFLPLLAHWTFGAAIHWDIPQLRGFNFLGGMALIPELAAL 264 Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329 +ALS YT+AFIAEI+R+G+ AVP GQ EAA +LGL + R V++PQA+R IIPPLTS Sbjct: 265 TLALSVYTSAFIAEIIRAGIQAVPYGQHEAARSLGLPNPVTLRQVIIPQALRVIIPPLTS 324 Query: 330 QYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388 QYLN++KNSSLA A+G+ D+VS+ GT++NQTGQAIE I I M +YL +S+ I+L MN Sbjct: 325 QYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAITMSVYLIISLSISLLMNIY 384 Query: 389 NAKIALKEK 397 N ++AL E+ Sbjct: 385 NRRMALIER 393 >gi|332163169|ref|YP_004299746.1| putative ABC transporter permease [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|325667399|gb|ADZ44043.1| putative ABC transporter permease [Yersinia enterocolitica subsp. palearctica 105.5R(r)] Length = 392 Score = 253 bits (647), Expect = 3e-65, Method: Compositional matrix adjust. Identities = 162/373 (43%), Positives = 221/373 (59%), Gaps = 9/373 (2%) Query: 30 QIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAI 89 QII L+L + +N N+ ++ G FL+ AGF I Q ++ Y +Y Sbjct: 24 QIIALLILLGCGAYLFHNTITNLSTRGITSGFAFLNNSAGFGIVQHLIDYEQGDTYGRVF 83 Query: 90 LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 LVG NT ++ + A+I+G +G RLS N L+ + +Y+E FRNIPPL+ IFF Y Sbjct: 84 LVGLFNTLLVSVLCIFFASILGFFLGLARLSDNWLLRKLSTIYIETFRNIPPLLQIFFWY 143 Query: 150 KSVLSVLPIPDHSIVLPFGM-FLNNRGLSFPTLTMDTNAKIFVFSF--VLGIVLSLFATR 206 +VL LP P S FG+ FL+NRGL P+ A FV + VL V+++ A Sbjct: 144 FAVLRNLPGPRQSQD-AFGVAFLSNRGLYLPSPEF---AAGFVPALIAVLLAVIAIIALH 199 Query: 207 LSRHFHE-KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265 HF + TG+ I L+ LP L LH+D P L FNF GG + PE Sbjct: 200 RYNHFRQLHTGQFHRTWPIGLVLLIALPALAHWLYGPALHWDLPQLRGFNFKGGLVLIPE 259 Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 +L +ALS YT+ FIAE++RSG+ +VP GQ EAA +L L + R V+LPQA+R IIP Sbjct: 260 LAALTLALSVYTSTFIAEVIRSGIQSVPYGQHEAARSLALPNTVTLRQVILPQALRVIIP 319 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 PLTSQYLN++KNSSLA A+G+ D+VS+ GT++NQTGQAIE I I M +YL +S+ I+ Sbjct: 320 PLTSQYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAITMSVYLVISLSISFL 379 Query: 385 MNRLNAKIALKEK 397 MN N +IAL E+ Sbjct: 380 MNLYNRRIALVER 392 >gi|238752137|ref|ZP_04613619.1| L-amino acid ABC transporter permease protein [Yersinia rohdei ATCC 43380] gi|238709610|gb|EEQ01846.1| L-amino acid ABC transporter permease protein [Yersinia rohdei ATCC 43380] Length = 392 Score = 253 bits (647), Expect = 3e-65, Method: Compositional matrix adjust. Identities = 167/397 (42%), Positives = 232/397 (58%), Gaps = 9/397 (2%) Query: 4 NARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGF 63 + R TV FS L + V QII L+L + ++N N+ ++ G F Sbjct: 2 SQRPTVKGAFS----LTNPAVRAWLYQIIALLILIGCGAYLLHNTLTNLSTRGITSGFAF 57 Query: 64 LSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK 123 L+ AGF I Q ++ Y SY LVG NT ++ + A+I+G +G RLS N Sbjct: 58 LNNSAGFGIIQHLIDYQQGDSYGRVFLVGLFNTLLVSALCIFFASILGFFLGLARLSDNW 117 Query: 124 LVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGM-FLNNRGLSFPTLT 182 L+ + +Y+E FRNIPPL+ IFF Y +VL LP P S+ FG+ FL+NRGL P+ Sbjct: 118 LLRKLSTIYIETFRNIPPLLQIFFWYFAVLRNLPGPRQSLE-AFGVAFLSNRGLYLPSPE 176 Query: 183 MDTNAKIFVFSFVLGIVLSLFATRLSRHFHE-KTGKALPLLYISTFLIFGLPTLVLIALK 241 A + + +L I L + R + HF + TG+ I L+ LP + Sbjct: 177 FAAGAIPALVAVLLAIALIIAIHRYN-HFRQLHTGQFHRTWPIGVLLLIALPAGAQLISG 235 Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301 LH++ P L FNF GG + PE +L +ALS YT+ FIAE++RSG+ +VP GQ EAA Sbjct: 236 PALHWNLPELQGFNFKGGLVLIPELAALTLALSVYTSTFIAEVIRSGIQSVPYGQHEAAR 295 Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQT 360 +L L +R R V+LPQA+R IIPPLTSQYLN++KNSSLA A+G+ D+VS+ GT++NQT Sbjct: 296 SLALPNRVTLRQVILPQALRVIIPPLTSQYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQT 355 Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 GQAIE I I M +YL +S+ I+ MN N +IAL E+ Sbjct: 356 GQAIETIAITMSVYLVISLSISFLMNLYNRRIALVER 392 >gi|123444012|ref|YP_001007982.1| putative ABC transporter permease [Yersinia enterocolitica subsp. enterocolitica 8081] gi|122090973|emb|CAL13856.1| Putative ABC transporter permease [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 392 Score = 253 bits (646), Expect = 4e-65, Method: Compositional matrix adjust. Identities = 168/399 (42%), Positives = 230/399 (57%), Gaps = 13/399 (3%) Query: 4 NARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGF 63 + R TV FS L + V QII L+L + +N N+ ++ G F Sbjct: 2 SQRPTVKGAFS----LTNPAVRAWLYQIIALLILLGCGAYLFHNTITNLSTRGITSGFAF 57 Query: 64 LSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK 123 L+ AGF I Q ++ Y +Y LVG NT ++ + A+I+G +G RLS N Sbjct: 58 LNNSAGFGIVQHLIDYEQGDTYGRVFLVGLFNTLLVSVLCIFFASILGFFLGLARLSDNW 117 Query: 124 LVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGM-FLNNRGLSFPTLT 182 L+ + +Y+E FRNIPPL+ IFF Y +VL LP P S+ FG+ FL+NRGL P+ Sbjct: 118 LLRKLSTIYIETFRNIPPLLQIFFWYFAVLRNLPGPRQSLD-AFGVAFLSNRGLYLPSPE 176 Query: 183 MDTNAKIFVFSF--VLGIVLSLFATRLSRHFHE-KTGKALPLLYISTFLIFGLPTLVLIA 239 A FV + VL V+++ A HF + TG+ I L+ LP L Sbjct: 177 F---AAGFVPALIAVLLAVIAIIALYRYNHFRQLHTGQFRRTWPIGLVLLIALPALAHWL 233 Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299 LH+D P L FNF GG + PE +L +ALS YT+ FIAE++RSG+ +VP GQ EA Sbjct: 234 YGPALHWDLPQLRGFNFKGGLVLIPELAALTLALSVYTSTFIAEVIRSGIQSVPYGQHEA 293 Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIIN 358 A +L L + R V+LPQA+R IIPPLTSQYLN++KNSSLA A+G+ D+VS+ GT++N Sbjct: 294 ARSLALPNTVTLRQVILPQALRVIIPPLTSQYLNIVKNSSLAAAIGYPDMVSLFAGTVLN 353 Query: 359 QTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 QTGQAIE I I M +YL +S+ I+ MN N +I L E+ Sbjct: 354 QTGQAIETIAITMSVYLVISLSISFLMNLYNRRITLVER 392 >gi|318603945|emb|CBY25443.1| glutamate aspartate transport system permease protein GltJ [Yersinia enterocolitica subsp. palearctica Y11] Length = 392 Score = 253 bits (646), Expect = 4e-65, Method: Compositional matrix adjust. Identities = 162/373 (43%), Positives = 221/373 (59%), Gaps = 9/373 (2%) Query: 30 QIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAI 89 QII L+L + +N N+ ++ G FL+ AGF I Q ++ Y +Y Sbjct: 24 QIIALLILLGCGAYLFHNTITNLSTRGITSGFAFLNNSAGFGIVQHLIDYEQGDTYGRVF 83 Query: 90 LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 LVG NT ++ + A+I+G +G RLS N L+ + +Y+E FRNIPPL+ IFF Y Sbjct: 84 LVGLFNTLLVSVLCIFFASILGFFLGLARLSDNWLLRKLSTIYIETFRNIPPLLQIFFWY 143 Query: 150 KSVLSVLPIPDHSIVLPFGM-FLNNRGLSFPTLTMDTNAKIFVFSF--VLGIVLSLFATR 206 +VL LP P S FG+ FL+NRGL P+ A FV + VL V+++ A Sbjct: 144 FAVLRNLPGPRQSQD-AFGVAFLSNRGLYLPSPEF---AAGFVPALIAVLLAVIAIIALH 199 Query: 207 LSRHFHE-KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265 HF + TG+ I L+ LP L LH+D P L FNF GG + PE Sbjct: 200 RYNHFRQLHTGQFHRTWPIGLVLLIALPALAHWLYGPALHWDLPQLRGFNFKGGLVLIPE 259 Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 +L +ALS YT+ FIAE++RSG+ +VP GQ EAA +L L + R V+LPQA+R IIP Sbjct: 260 LAALTLALSVYTSTFIAEVIRSGIQSVPYGQDEAARSLALPNTVTLRQVILPQALRVIIP 319 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 PLTSQYLN++KNSSLA A+G+ D+VS+ GT++NQTGQAIE I I M +YL +S+ I+ Sbjct: 320 PLTSQYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAITMSVYLVISLSISFL 379 Query: 385 MNRLNAKIALKEK 397 MN N +IAL E+ Sbjct: 380 MNLYNRRIALVER 392 >gi|331007194|ref|ZP_08330405.1| Amino acid ABC transporter, permease protein [gamma proteobacterium IMCC1989] gi|330418989|gb|EGG93444.1| Amino acid ABC transporter, permease protein [gamma proteobacterium IMCC1989] Length = 348 Score = 253 bits (645), Expect = 4e-65, Method: Compositional matrix adjust. Identities = 140/348 (40%), Positives = 216/348 (62%), Gaps = 1/348 (0%) Query: 52 MEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIG 111 ME + G GFL+E AGF+I +VPY + +Y +VG +NT ++ G+ +TI+G Sbjct: 1 MEALGIKSGYGFLTETAGFDILMSLVPYDATYTYGRTFVVGLLNTILVSIVGIFFSTILG 60 Query: 112 TLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFL 171 ++G S N L+ + VYV+ FRNIP L+ +FF Y +VL+ LP SI + FL Sbjct: 61 FIIGIAYFSKNWLLHKMSIVYVQTFRNIPLLLQVFFWYFAVLAALPGARDSINIGEAFFL 120 Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231 N RGL FP + ++ + + + ++ ++ + ++ ++TG+ P+ + LI G Sbjct: 121 NVRGLYFPAIVGESGSGFVHAALAIAVIAAIIIKKWAKKRQDETGQQFPVFITAIGLIVG 180 Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291 LP + + L D P L FNF GG TV PE M+L +ALS Y AAFIAE VR+G+ + Sbjct: 181 LPLITNLILGTPFILDYPSLQGFNFAGGVTVIPELMALTLALSVYGAAFIAEAVRAGIQS 240 Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 VP GQ EAA ++ L ++ L+++PQAMR IIP L S+Y +L+KNS+LA A+G+ DL + Sbjct: 241 VPHGQTEAARSIALPEKRIMSLIIVPQAMRVIIPLLNSEYQSLIKNSTLATAIGYPDLFT 300 Query: 352 V-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 V GT +NQTGQAIEI+ + M Y ++++++++ MN +N +AL E+K Sbjct: 301 VFVGTTLNQTGQAIEIVFMTMAAYFAINMLVSVIMNFMNGGVALTERK 348 >gi|115524736|ref|YP_781647.1| polar amino acid ABC transporter, inner membrane subunit [Rhodopseudomonas palustris BisA53] gi|115518683|gb|ABJ06667.1| polar amino acid ABC transporter, inner membrane subunit [Rhodopseudomonas palustris BisA53] Length = 401 Score = 252 bits (644), Expect = 6e-65, Method: Compositional matrix adjust. Identities = 160/391 (40%), Positives = 230/391 (58%), Gaps = 7/391 (1%) Query: 1 MIKNARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWC----VNNVYNNMEKSN 56 M AR +++ +R++ R + L LL LW +NV N+ Sbjct: 1 MAIEARPPPSQWVARLRRAVGGRSGWKG--LALQLLFVAALLWVGYEIADNVRGNLANQR 58 Query: 57 LSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGA 116 ++ G GF+S+ AGF + Q ++PY+ SY LVG VNT ++ G+ ATI+G +V Sbjct: 59 IASGFGFMSQTAGFGVSQALIPYSESDSYTRVFLVGLVNTLVVSAIGIFFATILGFIVAL 118 Query: 117 GRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGL 176 RLS N L+A I YVE+ RN+P L I F Y +VL LP P S+ L FL+NRG+ Sbjct: 119 CRLSPNWLLARIGGGYVELVRNLPLLFQILFWYLAVLGTLPSPRQSVSLFDAFFLSNRGI 178 Query: 177 SFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV 236 P + F+ + + I ++ +R +TGK L + L+ GLP L Sbjct: 179 VVPKPVGEAGLDAFLIAVAIAIAAAIALPAFARRRLYQTGKPLKVWPAVLGLLIGLPLLA 238 Query: 237 LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296 + F+ P L FNF+GG + PEF++L +ALS YTAAFIAEIVR+G+ +V +GQ Sbjct: 239 SLIAGQPFSFEIPALKGFNFVGGGRMPPEFVALTLALSTYTAAFIAEIVRAGIQSVHKGQ 298 Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGT 355 MEA +LGL+ RL+++PQA+R I+PPLT+QYLNL KNSSLAVA+G+ DL SV GT Sbjct: 299 MEAGASLGLSRGATLRLIVIPQALRVILPPLTNQYLNLTKNSSLAVAIGYPDLFSVFAGT 358 Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMN 386 ++QTGQAIEII + M +YL++S++ + M+ Sbjct: 359 TLSQTGQAIEIIAVTMSVYLAISLVTSALMS 389 >gi|192291211|ref|YP_001991816.1| polar amino acid ABC transporter inner membrane subunit [Rhodopseudomonas palustris TIE-1] gi|192284960|gb|ACF01341.1| polar amino acid ABC transporter, inner membrane subunit [Rhodopseudomonas palustris TIE-1] Length = 401 Score = 252 bits (643), Expect = 9e-65, Method: Compositional matrix adjust. Identities = 149/359 (41%), Positives = 216/359 (60%), Gaps = 21/359 (5%) Query: 45 VNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGM 104 V+N +N+ ++ G F+S AGF + Q ++PY SY LVG +NT ++ G+ Sbjct: 47 VDNARDNLANQRIASGFAFMSHTAGFGVSQTLIPYQESDSYTRVFLVGLINTLVVSVVGI 106 Query: 105 IPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIV 164 AT+IG V RLS N L++ I YVE+ RN+P L I F Y +VL LP P SI Sbjct: 107 FFATVIGFAVALARLSPNWLISRIGGGYVEIVRNLPLLFQILFWYLAVLGSLPSPRQSIS 166 Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL--- 221 + FL+NRG+ P L + F+ + ++ + ++ +R TGK + + Sbjct: 167 VMDSFFLSNRGIVVPRLAGEAGLDGFLVALLIAVAAAIVLPLYARRRLFATGKPMRVWPW 226 Query: 222 -------LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALS 274 L + FLI G P + PVL FNF+GGS ++PEF++L +ALS Sbjct: 227 VLGLLIGLPLIAFLIVGKP----------FSLEVPVLRGFNFVGGSRIAPEFVALTLALS 276 Query: 275 CYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNL 334 YTAAFIAE+VR+G+++V +GQMEA +LGL+ + RL+++PQAMR I+PPLT+QYLNL Sbjct: 277 TYTAAFIAEVVRAGILSVHKGQMEAGASLGLSRGQTLRLIVIPQAMRVILPPLTNQYLNL 336 Query: 335 LKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 KNSSLAVA+G+ DL SV GT ++QTGQAIE+I I M +YL +S++ + M+ +I Sbjct: 337 TKNSSLAVAIGYPDLFSVFAGTTLSQTGQAIEVIAITMGVYLLISLVTSALMSLYGWRI 395 >gi|330862828|emb|CBX72969.1| putative amino-acid ABC transporter permease protein yhdX [Yersinia enterocolitica W22703] Length = 400 Score = 252 bits (643), Expect = 9e-65, Method: Compositional matrix adjust. Identities = 161/373 (43%), Positives = 220/373 (58%), Gaps = 9/373 (2%) Query: 30 QIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAI 89 QII L+L + +N N+ ++ G FL+ AGF I Q ++ Y +Y Sbjct: 32 QIIALLILLGCGAYLFHNTITNLSTRGITSGFAFLNNSAGFGIVQHLIDYEQGDTYGRVF 91 Query: 90 LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 LVG NT ++ + A+I+G +G LS N L+ + +Y+E FRNIPPL+ IFF Y Sbjct: 92 LVGLFNTLLVSVLCIFFASILGFFLGLAHLSDNWLLRKLSTIYIETFRNIPPLLQIFFWY 151 Query: 150 KSVLSVLPIPDHSIVLPFGM-FLNNRGLSFPTLTMDTNAKIFVFSF--VLGIVLSLFATR 206 +VL LP P S FG+ FL+NRGL P+ A FV + VL V+++ A Sbjct: 152 FAVLRNLPGPRQSQD-AFGVAFLSNRGLYLPSPEF---AAGFVPALIAVLLAVIAIIALH 207 Query: 207 LSRHFHE-KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265 HF + TG+ I L+ LP L LH+D P L FNF GG + PE Sbjct: 208 RYNHFRQLHTGQFHRTWPIGLVLLIALPALAHWLYGPALHWDLPQLRGFNFKGGLVLIPE 267 Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 +L +ALS YT+ FIAE++RSG+ +VP GQ EAA +L L + R V+LPQA+R IIP Sbjct: 268 LAALTLALSVYTSTFIAEVIRSGIQSVPYGQHEAARSLALPNTVTLRQVILPQALRVIIP 327 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 PLTSQYLN++KNSSLA A+G+ D+VS+ GT++NQTGQAIE I I M +YL +S+ I+ Sbjct: 328 PLTSQYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAITMSVYLVISLSISFL 387 Query: 385 MNRLNAKIALKEK 397 MN N +IAL E+ Sbjct: 388 MNLYNRRIALVER 400 >gi|7465992|pir||G65119 hypothetical 40.4 kD protein in acrF-rrnD intergenic region - Escherichia coli (strain K-12) gi|606210|gb|AAA58073.1| ORF_o368a; frameshift at end might extend [Escherichia coli str. K-12 substr. MG1655] Length = 368 Score = 251 bits (642), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 141/334 (42%), Positives = 204/334 (61%), Gaps = 1/334 (0%) Query: 30 QIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAI 89 QI+ + + I W +N N+ ++ G FL AGF I Q ++ Y +Y Sbjct: 31 QILAVVAVVGIVGWLFHNTVTNLNNRGITSGFAFLDRGAGFGIVQHLIDYQQGDTYGRVF 90 Query: 90 LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 +VG +NT ++ ++ A+++G +G RLS N L+ + +Y+E+FRNIPPL+ IFF Y Sbjct: 91 IVGLLNTLLVSALCIVFASVLGFFIGLARLSDNWLLRKLSTIYIEIFRNIPPLLQIFFWY 150 Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209 +VL LP P ++ FL+NRGL P+ + F+ + V+ IVLS+ R ++ Sbjct: 151 FAVLRNLPGPRQAVSAFDLAFLSNRGLYIPSPQLGDGFIAFILAVVMAIVLSVGLFRFNK 210 Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269 + KTG+ I+ LI GLP L LH+D P L FNF GG + PE +L Sbjct: 211 TYQIKTGQLRRTWPIAAVLIIGLPLLAQWLFGAALHWDVPALRGFNFRGGMVLIPELAAL 270 Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329 +ALS YT+AFIAEI+R+G+ AVP GQ EAA +LGL + R V++PQA+R IIPPLTS Sbjct: 271 TLALSVYTSAFIAEIIRAGIQAVPYGQHEAARSLGLPNPVTLRQVIIPQALRVIIPPLTS 330 Query: 330 QYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQ 362 QYLN++KNSSLA A+G+ D+VS+ GT++NQTG+ Sbjct: 331 QYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGK 364 >gi|163745576|ref|ZP_02152936.1| glutamate/glutamine/aspartate/asparagine transport system permease protein [Oceanibulbus indolifex HEL-45] gi|161382394|gb|EDQ06803.1| glutamate/glutamine/aspartate/asparagine transport system permease protein [Oceanibulbus indolifex HEL-45] Length = 389 Score = 251 bits (642), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 156/390 (40%), Positives = 228/390 (58%), Gaps = 12/390 (3%) Query: 18 FLYDMRVHNISVQIILALLLTVIFLWCV-NNVYNNMEKSNLSLGIGFLSERAGFEIDQGI 76 L D R +I+ Q+I AL+L V +W + +N+ N+ + L++ FL AG++I+Q + Sbjct: 2 LLSDTRYRSITFQVI-ALVLLVTAIWYLGSNLAANLRAAGLNISFQFLGNPAGYDINQTL 60 Query: 77 VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136 +PYTS SS A VG +NT ++F + AT+ G + G RLS N LV + YVE+F Sbjct: 61 IPYTSQSSNLQAAWVGIINTLLVSFLACLTATLFGVVAGVLRLSNNWLVRKLMAGYVEIF 120 Query: 137 RNIPPLVVIFFLYKSVLSVLPIP------DHSIVLPFGMF-LNNRGLSFPTLTMDTNAKI 189 RNIP L+ I +Y + + +P P D + + G F NRG+ P + Sbjct: 121 RNIPVLIWILIIYTIMTAAMPAPSAFRGDDPASSMMLGSFAFTNRGVYIPGPVWGAGSMF 180 Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLI-ALKYQLHFDK 248 V +F+ I+ R + TG+ LP+L+ S ++ LPT+V+ + + D Sbjct: 181 VVATFIASIIGVFAYRRYATKLLYDTGRLLPMLWPSVAILL-LPTIVVFFIMGMPIGLDY 239 Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308 P L FNF GG + ++L+ ALS YT AFIAE VR+G+ AV RGQ EAA ALGL Sbjct: 240 PALKGFNFQGGIQIGAPLIALWFALSIYTGAFIAENVRAGIQAVSRGQSEAAAALGLRPG 299 Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV-SVGGTIINQTGQAIEII 367 + LV+LPQA+R IIPPL S YLN+ KNSSLA+ VG+AD+ ++GG +NQTG+AIE + Sbjct: 300 RVMNLVVLPQALRVIIPPLISNYLNITKNSSLAILVGYADITATLGGITLNQTGRAIECV 359 Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 ++ M YL +S+ I++ MN N LKE+ Sbjct: 360 VLLMLFYLVISLGISMVMNVYNNATKLKER 389 >gi|89070521|ref|ZP_01157810.1| ABC glutamate/glutamine/aspartate/asparagine transporter, inner membrane subunit BztB [Oceanicola granulosus HTCC2516] gi|89043828|gb|EAR50026.1| ABC glutamate/glutamine/aspartate/asparagine transporter, inner membrane subunit BztB [Oceanicola granulosus HTCC2516] Length = 424 Score = 251 bits (641), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 153/394 (38%), Positives = 232/394 (58%), Gaps = 12/394 (3%) Query: 13 FSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEI 72 F + +YD R ++++Q++ +LL + W V+N N+ GFL++ AG++I Sbjct: 34 FRLSQLIYDSRYRSLTIQVVAMVLLVLALSWLVSNTIQNLAALGKDFNFGFLTQSAGYDI 93 Query: 73 DQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVY 132 +Q ++PY + S+ A LVG +NT +AF G + ATIIGT+ G RLS N +V + VY Sbjct: 94 NQRLIPYDNQMSHGRAALVGILNTILVAFLGCVTATIIGTIAGVLRLSKNWIVGRLMTVY 153 Query: 133 VEVFRNIPPLVVIFFLYKSVLSVLPIPDH----SIVLPFG-MFLNNRGLSFPTLTMDTNA 187 VE FRN+P L+ I ++ V +P P + + FG + + +G P + + Sbjct: 154 VEAFRNVPLLLWIILIFAIVNESMPHPRDFGSGDVPMVFGSIAITRQGTWIPAPVFENLS 213 Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV---LIALKYQL 244 F +V R +R E TG+ P+ ++S L F LPT++ L+ + L Sbjct: 214 GALFIVFAASLVAIALYRRWARKRQEATGQISPVFWVSLGL-FVLPTVIAYFLLGMPVSL 272 Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304 + +P G+F F GG + ++L++ALS YT AFIAEIVR G++A+ +GQ EAA ALG Sbjct: 273 DYPEP--GRFRFDGGLLIRNSLIALWLALSLYTGAFIAEIVRGGILAISKGQSEAAYALG 330 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL-VSVGGTIINQTGQA 363 L + LV+LPQAMR I+PPL SQ+LNL KNSSLA+AVG+ D ++GG INQTG+ Sbjct: 331 LRPNRTMNLVILPQAMRVIVPPLISQFLNLTKNSSLAIAVGYMDARATLGGITINQTGRE 390 Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 +E +L+ YL LS++I+ MN N ++ LKE+ Sbjct: 391 LEGMLLLGLFYLVLSLVISAVMNVYNNRVKLKER 424 >gi|51245287|ref|YP_065171.1| amino acid ABC transporter, permease protein [Desulfotalea psychrophila LSv54] gi|50876324|emb|CAG36164.1| probable amino acid ABC transporter, permease protein [Desulfotalea psychrophila LSv54] Length = 390 Score = 251 bits (640), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 151/356 (42%), Positives = 222/356 (62%), Gaps = 1/356 (0%) Query: 17 KFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGI 76 +FL+D R + Q + L+L + NV +N++K+ ++ G FL E AGF+I Q + Sbjct: 22 RFLHDARFRSYLAQATVLLVLIAALSYGGYNVVHNLQKAGVTTGFAFLDETAGFDISQTL 81 Query: 77 VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136 + Y+S S+YA A++VG +NT ++ G++ +T++G + RLS+N LV+ + YVE+ Sbjct: 82 IAYSSKSTYADALVVGLLNTLLVSALGIVFSTVLGFSLAVLRLSSNWLVSKLATTYVEII 141 Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196 RNIP L+ I F Y ++L+ LP ++ +L NRGL P +D + + L Sbjct: 142 RNIPLLLQILFWYLAILAPLPSARKALSFEGIAYLCNRGLQLPRPVLDGGGNLVALALGL 201 Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256 +V+S F R + +TG+ P + S LI LP + L + + LH++ PVL FNF Sbjct: 202 ALVVSFFFIRWNHLRQRRTGRRFPAVLFSLVLIISLPLVALACMGFPLHWELPVLKGFNF 261 Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316 GG TV PE ++L +AL+ YTA FI+E VRSG+++V RGQ EAA ALG RL++L Sbjct: 262 RGGITVLPELIALLLALTLYTATFISEYVRSGIMSVDRGQKEAAEALGYQPWMIYRLIIL 321 Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWM 371 PQAMR IPPL SQYL L+KNSSLAV +G+ DL+ V GT++NQ+GQA+EII I M Sbjct: 322 PQAMRVAIPPLISQYLTLVKNSSLAVVIGYPDLIHVFAGTVLNQSGQAMEIIAITM 377 >gi|159042875|ref|YP_001531669.1| glutamate/glutamine/aspartate/asparagine ABC transport system permease [Dinoroseobacter shibae DFL 12] gi|157910635|gb|ABV92068.1| glutamate/glutamine/aspartate/asparagine ABC transport system permease [Dinoroseobacter shibae DFL 12] Length = 411 Score = 251 bits (640), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 159/387 (41%), Positives = 221/387 (57%), Gaps = 11/387 (2%) Query: 21 DMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYT 80 D R + Q I + L F W V+N N+ + FL + A +EIDQ ++PYT Sbjct: 26 DTRYRGYTFQFIALIALIFFFGWLVSNAIYNLAALGQDINFSFLGQPASYEIDQTLIPYT 85 Query: 81 SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140 S ++ A VG +NT +AF G I ATI G L G RLS N LVA + VYVE+FRNIP Sbjct: 86 STDTHMRAAFVGLLNTLLVAFLGCITATIFGVLAGVLRLSKNWLVAKVMSVYVEIFRNIP 145 Query: 141 PLVVIFFLYKSVLSVLPIP--------DHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVF 192 L+ I + + LP P ++VL + NRG+ P + + I V Sbjct: 146 VLIWIVIISAVMSQALPQPRAFRGEDATATMVLWDSVAFTNRGVYIPAPVWNPGSGIVVA 205 Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV-LIALKYQLHFDKPVL 251 FVL I+ R +++ TGK LP+ IS IF +PTL+ + + D P L Sbjct: 206 VFVLSIIGIFVFRRYAKNLLFNTGKLLPVGRIS-LAIFFVPTLLAFFVMGRPIGLDYPEL 264 Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311 G FNF GG + ++L+ AL+ YT AFIAE VR+G++AV +GQ EAA ALG+ + Sbjct: 265 GGFNFRGGINIRGTLIALWFALALYTGAFIAENVRAGILAVSKGQTEAAAALGMRPNRIM 324 Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV-SVGGTIINQTGQAIEIILIW 370 L++LPQA+R IIPP+ SQYLNL KNSSLA A+G+ DL ++GG +NQTG++ E +L+ Sbjct: 325 SLIILPQALRVIIPPVISQYLNLTKNSSLAAAIGYMDLTGTLGGVTLNQTGRSFECVLLL 384 Query: 371 MFIYLSLSIMIALFMNRLNAKIALKEK 397 M YL +S+ I+ MN N + LKE+ Sbjct: 385 MLFYLLISLSISALMNLYNNAVKLKER 411 >gi|39935627|ref|NP_947903.1| polar amino acid ABC transport permease AapQ-1 [Rhodopseudomonas palustris CGA009] gi|39649480|emb|CAE28002.1| polar amino acid ABC transport permease protein aapQ-1 [Rhodopseudomonas palustris CGA009] Length = 401 Score = 251 bits (640), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 146/349 (41%), Positives = 217/349 (62%), Gaps = 1/349 (0%) Query: 45 VNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGM 104 V+N +N+ ++ G F+S AGF + Q ++PY SY LVG +NT ++ G+ Sbjct: 47 VDNARDNLANQRIASGFAFMSHTAGFGVSQTLIPYQESDSYTRVFLVGLINTLVVSVVGI 106 Query: 105 IPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIV 164 AT+IG V RLS N L++ I YVE+ RN+P L I F Y +VL LP P S+ Sbjct: 107 FFATVIGFAVALARLSPNWLISRIGGGYVEIVRNLPLLFQILFWYLAVLGSLPSPRQSVS 166 Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224 + FL+NRG+ P L + F+ + ++ + ++ +R TGK + + Sbjct: 167 VMDSFFLSNRGIVVPRLAGEAGLDGFLVALLIAVAAAIVLPLYARRRLFATGKPMRVWPW 226 Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284 L+ GLP + + + + PVL FNF+GGS ++PEF++L +ALS YTAAFIAE+ Sbjct: 227 VLGLLIGLPLIAFVIVGKPFSLEVPVLRGFNFVGGSRIAPEFVALTLALSTYTAAFIAEV 286 Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344 VR+G+++V +GQMEA +LGL+ + RL+++PQAMR I+PPLT+QYLNL KNSSLAVA+ Sbjct: 287 VRAGILSVHKGQMEAGASLGLSRGQTLRLIVIPQAMRVILPPLTNQYLNLTKNSSLAVAI 346 Query: 345 GFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 G+ DL SV GT ++QTGQAIE+I I M +YL +S++ + M+ +I Sbjct: 347 GYPDLFSVFAGTTLSQTGQAIEVIAITMGVYLLISLVTSALMSLYGWRI 395 >gi|251791416|ref|YP_003006137.1| polar amino acid ABC transporter inner membrane subunit [Dickeya zeae Ech1591] gi|247540037|gb|ACT08658.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya zeae Ech1591] Length = 392 Score = 251 bits (640), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 163/388 (42%), Positives = 236/388 (60%), Gaps = 16/388 (4%) Query: 21 DMRVHNISVQIILALLLTVIFL-----WCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQG 75 D+ + N +V+ L +L V+ + + ++N N+ + ++ G FL+ AGF I Q Sbjct: 10 DLSLTNPAVRAWLYQILAVVIVVTTVGYLLHNTVTNLAQRGITSGFAFLNNSAGFGIVQH 69 Query: 76 IVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEV 135 ++ Y +YA +VG +NT ++ +I A+++G +VG RLS N L+ + +Y+E Sbjct: 70 LIDYEQGDTYARVFVVGLLNTLLVSAICIICASLLGFIVGLSRLSDNWLLRKLSTIYIET 129 Query: 136 FRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA--KIFVFS 193 FRNIPPL+ IFF Y +VL LP P ++ FL+NRGL P A V Sbjct: 130 FRNIPPLLQIFFWYFAVLRNLPGPRQAVNAFDTFFLSNRGLYIPAAEFGPGALPSFLVLL 189 Query: 194 FVLGIVLSLFATRLSRHFHEKTGKA---LPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 LG ++L R ++ +HE TG+ P+ + ++ GL L+ LH D PV Sbjct: 190 ISLGCAVALH--RRNKRYHELTGQQRRYWPIPLVMLIVLLGLSHLIF---GQALHGDFPV 244 Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 L FNF GG + PE +L +ALS YT++FIAEI+RSG+ +V GQ EAA++LGL Sbjct: 245 LKGFNFNGGLVLIPELAALALALSVYTSSFIAEIIRSGIQSVSHGQHEAALSLGLPKPVT 304 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILI 369 R V+LPQA+R IIPPLTSQYLN++KNSSLA A+G+ D+VS+ GT++NQTGQAIE I I Sbjct: 305 LRKVILPQALRVIIPPLTSQYLNVVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAI 364 Query: 370 WMFIYLSLSIMIALFMNRLNAKIALKEK 397 M +YL +S++I+L MN N KIAL E+ Sbjct: 365 TMSVYLIISLLISLLMNIYNRKIALIER 392 >gi|254469135|ref|ZP_05082540.1| glutamate/glutamine/aspartate/asparagine-binding protein [Pseudovibrio sp. JE062] gi|211960970|gb|EEA96165.1| glutamate/glutamine/aspartate/asparagine-binding protein [Pseudovibrio sp. JE062] Length = 678 Score = 250 bits (639), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 147/352 (41%), Positives = 205/352 (58%), Gaps = 4/352 (1%) Query: 50 NNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATI 109 N+E GFL E AG++I Q +V YTS S + A LVG +NT +AF + ATI Sbjct: 327 ENLEALGKDFNFGFLYEPAGYDIGQVLVNYTSASGHWKAALVGLLNTLLVAFLACVTATI 386 Query: 110 IGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPF-- 167 IG VG RLS N +V+ + VY+E RN+P L+ I Y + V P P ++ P Sbjct: 387 IGVFVGVLRLSNNWVVSRLMAVYIEGVRNVPLLLQILAWYAVFIHVFPTPKQAVKAPVIE 446 Query: 168 -GMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226 ++ NRG P LT D +I V + I R +R E TG+ LP+ YIS Sbjct: 447 GAVYATNRGFYIPGLTFDGGYQIVVAVLLASIAGIFVFRRWARQRQEATGQILPVGYISL 506 Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286 ++ L A + D PV G+FN GG V ++L+ ALS Y+AAF+AEIVR Sbjct: 507 AILIVPTVLAYFASGMPIGLDYPVAGRFNLKGGLKVGTPLIALWFALSIYSAAFVAEIVR 566 Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346 +G++A+ +GQ EAA ALGL R+ LV+LPQ++R IIPP+ S YLN+ KNSSLA+AVG+ Sbjct: 567 AGIMAISKGQTEAAYALGLRPRRTMSLVVLPQSLRIIIPPMISNYLNITKNSSLAIAVGY 626 Query: 347 ADLV-SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 DL ++GG +NQTG+ +E +L+ M YL +S+ I+ MN N + LK + Sbjct: 627 MDLTGTLGGITLNQTGREMECMLLLMATYLLISLSISAVMNVYNESVKLKGR 678 >gi|260432481|ref|ZP_05786452.1| glutamate/glutamine/aspartate/asparagine transport system permeaseprotein BztB [Silicibacter lacuscaerulensis ITI-1157] gi|260416309|gb|EEX09568.1| glutamate/glutamine/aspartate/asparagine transport system permeaseprotein BztB [Silicibacter lacuscaerulensis ITI-1157] Length = 410 Score = 250 bits (639), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 158/393 (40%), Positives = 238/393 (60%), Gaps = 18/393 (4%) Query: 21 DMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYT 80 D R +++ Q+I A+++ + + NN+ N+ + L++ FL + AG++I+Q +V Y Sbjct: 20 DTRYRSLTFQVIAAIVIALSIWYLGNNLIQNLRAAGLNISFAFLGDPAGYDINQRLVEYD 79 Query: 81 SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140 S SS+ A +VG +NT +A I ATI G + G RLS N LV+ I +YVE+FRNIP Sbjct: 80 SQSSHGRAAIVGILNTLLVAVLACITATIFGVIAGVLRLSKNWLVSKIMAIYVEIFRNIP 139 Query: 141 PLVVIFFLYKSVLSVLPIP------DHSIVLPFGMF-LNNRGLSFPTLTMDTN---AKIF 190 L+ I ++ + +V+P P + + + F +F NRG+ P + I Sbjct: 140 VLIWIIIIFTIMTAVMPGPREFRGDNPTSSMLFDLFAFTNRGVYIPRPEFSNGLFGSAIL 199 Query: 191 VFSFVL-GIVLSLFAT----RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH 245 + VL G+V S FA+ + + E+TG P ++ ++ +P L+L+ L L Sbjct: 200 NWLLVLAGLVGSWFASHEIEKRATLKQEQTGDR-PKTFLPKLAVWLVPFLILMVL-MGLT 257 Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305 +D P L FNF GG V ++L+ ALS YT AFIAE VR+G+ A+ +GQ EAA ALGL Sbjct: 258 WDVPELKGFNFSGGIKVGGPLIALWFALSIYTGAFIAENVRAGIQAISKGQTEAAAALGL 317 Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV-SVGGTIINQTGQAI 364 + +LV+LPQA+R IIPPL SQYLN+ KNSSLA+AVG+AD+ ++GG +NQTG+AI Sbjct: 318 RPGQIMKLVILPQALRVIIPPLISQYLNITKNSSLAIAVGYADITATLGGITLNQTGRAI 377 Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 E +L+ M YL+ S++I+ MN NA + LKE+ Sbjct: 378 ECVLLLMLFYLTASLLISAVMNVYNASVKLKER 410 >gi|254466381|ref|ZP_05079792.1| glutamate/glutamine/aspartate/asparagine transport system permease protein [Rhodobacterales bacterium Y4I] gi|206687289|gb|EDZ47771.1| glutamate/glutamine/aspartate/asparagine transport system permease protein [Rhodobacterales bacterium Y4I] Length = 395 Score = 250 bits (639), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 161/393 (40%), Positives = 232/393 (59%), Gaps = 18/393 (4%) Query: 21 DMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYT 80 D R +++ Q+I A++L + + NN+ N+ + L++ FL + AG++I+Q +V Y Sbjct: 5 DTRYRSLTFQVIAAIVLALCIWYLGNNLIQNLRAAGLNISYAFLGDSAGYDINQRLVEYD 64 Query: 81 SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140 S SS+A A LVG +NT +AF I ATI G + G RLS N LV+ + VYVE+FRNIP Sbjct: 65 SQSSHARAALVGVLNTLLVAFLACITATIFGVIAGVLRLSNNWLVSKLMAVYVEIFRNIP 124 Query: 141 PLVVIFFLYKSVLSVLPIP------DHSIVLPFGMF-LNNRGLSFPTLTMDT----NAKI 189 L+ I ++ + +VLP P D + + F F NRG+ P +A + Sbjct: 125 VLIWIIIIFTIMTAVLPGPREFRGDDATSSMLFDAFAFTNRGIYTPLPWFQNGIFESASM 184 Query: 190 FVFSFVLGIVLSLFATR----LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH 245 + G+ LS A + + E TG P + + +P L L + L Sbjct: 185 NWLLVLAGLGLSWVAAHQINAWANNKQEATG-VRPKTLLPVLAAWLVPFLALTMI-MGLT 242 Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305 ++ P L FNF GG V ++L+ ALS YT AFIAE VR+G+ AV +GQ EAA ALGL Sbjct: 243 WEYPELKGFNFTGGIKVGGPLIALWFALSIYTGAFIAENVRAGIQAVSKGQTEAAAALGL 302 Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL-VSVGGTIINQTGQAI 364 R+ LV+LPQAMR IIPPL SQ+LN+ KNSSLA+AVG+AD+ ++GG +NQTG+AI Sbjct: 303 RPRRVMNLVVLPQAMRVIIPPLISQFLNITKNSSLAIAVGYADITATLGGITLNQTGRAI 362 Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 E +L+ M YL+ S++I++ MN NA + LKE+ Sbjct: 363 ECVLLLMLFYLTASLVISMVMNVYNASVKLKER 395 >gi|146313342|ref|YP_001178416.1| polar amino acid ABC transporter, inner membrane subunit [Enterobacter sp. 638] gi|145320218|gb|ABP62365.1| amino acid ABC transporter membrane protein 1, PAAT family [Enterobacter sp. 638] Length = 393 Score = 250 bits (639), Expect = 3e-64, Method: Compositional matrix adjust. Identities = 155/356 (43%), Positives = 215/356 (60%), Gaps = 1/356 (0%) Query: 43 WCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFS 102 + V+N N+ ++ G FL AGF I Q ++ Y +Y LVG +NT ++ Sbjct: 38 YLVHNTVTNLSNRGITSGFAFLDRTAGFGIVQHLIDYQESDTYGRVFLVGLLNTLLVSAL 97 Query: 103 GMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHS 162 ++ A+ +G +G RLS N L+ + +Y+E FRNIPPL+ IFF Y +VL LP P + Sbjct: 98 CIVFASFLGFFLGLARLSENWLLRKLSTIYIETFRNIPPLLQIFFWYFAVLRNLPGPRQA 157 Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222 + FL+NRGL P+ + + V+ + +S+ R +R KTG+ Sbjct: 158 LDAFELFFLSNRGLYIPSPEAGEGLWAAIAAIVIAVAISVGLFRYNRMHQMKTGQLRKTW 217 Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282 + LI GLP L LH+D P L FNF GG + PE +L +ALS YT+AFIA Sbjct: 218 PVGLLLIVGLPLLAQGIFGSALHWDIPELRGFNFRGGMVLIPELAALTLALSIYTSAFIA 277 Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342 EI+RSG+ AVP GQ EAA +LGL + R V++PQA+R IIPPLTSQYLN+ KNSSLA Sbjct: 278 EIIRSGIQAVPHGQHEAARSLGLPNPVTLRQVIIPQALRVIIPPLTSQYLNIAKNSSLAA 337 Query: 343 AVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 A+G+ D+VS+ GT++NQTGQAIE I I M +YL +S+ I+L MN N +IAL E+ Sbjct: 338 AIGYPDMVSLFAGTVLNQTGQAIETIAITMSVYLVISLTISLLMNIYNRRIALVER 393 >gi|304391888|ref|ZP_07373830.1| glutamate/glutamine/aspartate/asparagine transport system permease protein BztB [Ahrensia sp. R2A130] gi|303296117|gb|EFL90475.1| glutamate/glutamine/aspartate/asparagine transport system permease protein BztB [Ahrensia sp. R2A130] Length = 400 Score = 250 bits (638), Expect = 3e-64, Method: Compositional matrix adjust. Identities = 158/388 (40%), Positives = 225/388 (57%), Gaps = 4/388 (1%) Query: 13 FSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEI 72 F + YD R +I++QII + ++ W V NV N E + G FL + A ++I Sbjct: 14 FRLSQLFYDQRYRSITLQIITIAVFMLMVSWLVTNVIQNFEDLGKTFGFDFLWQPASYDI 73 Query: 73 DQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVY 132 +Q ++ Y+S S + A +VG +NT +AF G I ATIIG VG RLS N LVA + V+ Sbjct: 74 NQKLIEYSSVSPHWKAAIVGILNTLVVAFLGCILATIIGVAVGVARLSKNWLVAKLMTVF 133 Query: 133 VEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFL-NNRGLSFPTLTMDTNAKIFV 191 +E RN+P L+ I S LP P + V+ G F+ NRG P + + I Sbjct: 134 IEAMRNVPVLLWILLASTVFSSALPSPRQAPVMLGGGFVPTNRGFYVPAPVFNDGSIILG 193 Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLI-ALKYQLHFDKPV 250 F+ I+ + R + +TG LP+ I T I LP V+ L + + P Sbjct: 194 IIFIASIIGAFIFRRWAAARQARTGDILPVFRI-TMAILILPVFVMFFLLGMPIGLELPE 252 Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 L FNF GG + FM+L++ALS YTAAFIAE VR+G+ A+ GQ EAA +LGL + Sbjct: 253 LQGFNFQGGLYIRSSFMALWLALSFYTAAFIAENVRAGIQAISNGQSEAAYSLGLPPSRT 312 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV-SVGGTIINQTGQAIEIILI 369 LV+LPQA+R IIPPL SQYLNL KNSSLA+AVG+ D+ ++GG +NQTG+ +E +L+ Sbjct: 313 MNLVILPQALRIIIPPLISQYLNLTKNSSLAIAVGYMDVTGTLGGITLNQTGREMECLLL 372 Query: 370 WMFIYLSLSIMIALFMNRLNAKIALKEK 397 M YL +S++I+ MN N ++L+E+ Sbjct: 373 VMGFYLIISLLISGAMNIYNNSVSLRER 400 >gi|84499807|ref|ZP_00998095.1| glutamate/glutamine/aspartate/asparagine ABC transporter, permease protein [Oceanicola batsensis HTCC2597] gi|84392951|gb|EAQ05162.1| glutamate/glutamine/aspartate/asparagine ABC transporter, permease protein [Oceanicola batsensis HTCC2597] Length = 389 Score = 250 bits (638), Expect = 3e-64, Method: Compositional matrix adjust. Identities = 152/385 (39%), Positives = 221/385 (57%), Gaps = 8/385 (2%) Query: 21 DMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYT 80 D R +I+ Q++ +LL + N+ N+ + FL E +G++I+Q +PY Sbjct: 5 DTRYRSITFQVVALILLAAAIGFLGWNLMRNLALLGQDISFEFLGEPSGYDINQRPIPYD 64 Query: 81 SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140 S SS+ A VG +NT +AF G I ATI+G + G RLS N ++ + VYVE FRN+P Sbjct: 65 SQSSHLRATFVGVLNTLIVAFLGCITATILGVVAGVLRLSNNWIIRKLMMVYVEAFRNVP 124 Query: 141 PLVVIFFLYKSVLSVLPIP------DHSIVLPFGMF-LNNRGLSFPTLTMDTNAKIFVFS 193 L+ I ++ + + LP P D + FG F NRG+ P + + I V Sbjct: 125 VLIWILIIFFVMTAALPPPSAFRGDDPDSSMLFGAFAFTNRGIYIPRPIWEPGSAIVVGV 184 Query: 194 FVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ 253 F+ ++ R + TGK LP + S ++F LV L + D P L Sbjct: 185 FIASVIGVFAYRRYTTRLLYDTGKLLPRGWPSLLILFVPTLLVFFILGQPISLDLPALRG 244 Query: 254 FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313 FNF GG+ + ++L+ AL+ YT AFIAE VR+G+ AV GQ EAA +LGL + L Sbjct: 245 FNFQGGTQIRGSLIALWFALAIYTGAFIAENVRAGIQAVSHGQTEAAASLGLRPGRIMNL 304 Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV-SVGGTIINQTGQAIEIILIWMF 372 V+LPQA+R +IPP+ SQYLNL KNSSLA+AVG+ DL ++GG +NQTG+AIE +L+ M Sbjct: 305 VVLPQALRIVIPPVISQYLNLTKNSSLAIAVGYMDLTGTLGGITLNQTGRAIESVLLLML 364 Query: 373 IYLSLSIMIALFMNRLNAKIALKEK 397 YL++S+ I+ MN NA++ LKE+ Sbjct: 365 FYLTISLSISAVMNVYNARMQLKER 389 >gi|259906954|ref|YP_002647310.1| amino-acid ABC transporter permease protein [Erwinia pyrifoliae Ep1/96] gi|224962576|emb|CAX54031.1| amino-acid ABC transporter permease protein [Erwinia pyrifoliae Ep1/96] gi|283476748|emb|CAY72584.1| putative ABC transport system, inner membrane component [Erwinia pyrifoliae DSM 12163] Length = 392 Score = 250 bits (638), Expect = 3e-64, Method: Compositional matrix adjust. Identities = 154/357 (43%), Positives = 217/357 (60%), Gaps = 3/357 (0%) Query: 43 WCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFS 102 + ++N NN+ ++ G FL AGF I Q ++ Y+ SYA LVG NT ++ Sbjct: 37 YLIHNTTNNLASRGITSGFSFLERNAGFGIVQHLIDYSEGDSYARVFLVGLTNTLLVSAL 96 Query: 103 GMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHS 162 ++ A+++G VG RLS N L+ + VYVE FRNIPPL+ IFF Y +VL LP P + Sbjct: 97 CIVFASLLGFFVGLARLSDNWLLRKLSTVYVETFRNIPPLLQIFFWYFAVLRNLPGPRQA 156 Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222 + F++NRGL P F+ + +L +S R ++ KTG+ L Sbjct: 157 LHAFDLAFVSNRGLYIPWPEYSAGTVPFLLALLLATAISTALFRYNKQHQLKTGR-LRRT 215 Query: 223 YISTFLIFGL-PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281 + +T + L P ++ +H+D P L FNF GG + PE +L +ALS YT+ FI Sbjct: 216 WPATVAMLALFPLAAILLAGSPMHWDIPQLRGFNFRGGFVLIPELAALTLALSIYTSTFI 275 Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341 AE++RSG+ +VP GQ EAA +LGL H V++PQA+R IIPPLTSQYLN++KNSSLA Sbjct: 276 AEVIRSGIQSVPYGQHEAASSLGLPHTVTLHQVIIPQALRVIIPPLTSQYLNIVKNSSLA 335 Query: 342 VAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 A+G+ D+VS+ GT++NQTGQAIE I I M +YL +S+ I+L MN N KIAL E+ Sbjct: 336 AAIGYPDMVSLFAGTVLNQTGQAIETIAITMGVYLIISLSISLLMNIYNRKIALIER 392 >gi|317122274|ref|YP_004102277.1| amino acid ABC transporter membrane protein 1, PAAT family [Thermaerobacter marianensis DSM 12885] gi|315592254|gb|ADU51550.1| amino acid ABC transporter membrane protein 1, PAAT family [Thermaerobacter marianensis DSM 12885] Length = 392 Score = 250 bits (638), Expect = 3e-64, Method: Compositional matrix adjust. Identities = 148/375 (39%), Positives = 215/375 (57%), Gaps = 11/375 (2%) Query: 21 DMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYT 80 D+R+ + +Q ++ + + ++ + NV N+++ ++ G FL A F I + + Y Sbjct: 15 DVRLRRLLIQGVVLVAVAAAAVYLIGNVQRNLQQLGITPGFDFLRHPASFAIGETSIAYR 74 Query: 81 SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140 + Y A L G VNT ++ G++ AT++G G RLS N LV + +YVEV RN P Sbjct: 75 ASDPYGRAFLAGLVNTLRVSVLGVVLATVVGVTAGLARLSGNGLVRLLASLYVEVTRNTP 134 Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200 L+ +FF Y +++ LP +I LP +FL NRGL P F L IVL Sbjct: 135 LLLQLFFWYGAIVYTLPPAAQAITLPGSVFLMNRGLVMPAPKPGPG-----FGPALAIVL 189 Query: 201 SLFATRLSRHFH------EKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQF 254 + + + E+ + P L + L G+ + L D+PVL +F Sbjct: 190 TAAVAAMVAYRRLLRRRVEEGRETRPGLVAAVLLAAGVLAAGFLPPGPPLVLDRPVLARF 249 Query: 255 NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLV 314 NF GG +S EF +L +AL YT AFIAE+VR G++AVPRGQ EAA +LGL RLV Sbjct: 250 NFQGGLMLSAEFTALLLALVIYTGAFIAEVVRGGVLAVPRGQWEAAASLGLPPLLVQRLV 309 Query: 315 LLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374 + PQA+R IIPPLTSQYLNL+KNSSLA+AV F DL++V TI+NQTG+ +E++L+ Y Sbjct: 310 VFPQALRIIIPPLTSQYLNLIKNSSLAMAVAFPDLLNVSSTIVNQTGRTLEVLLMVGGTY 369 Query: 375 LSLSIMIALFMNRLN 389 L+ S++ +L MN N Sbjct: 370 LAFSLLTSLLMNLYN 384 >gi|310766169|gb|ADP11119.1| amino-acid ABC transporter permease protein [Erwinia sp. Ejp617] Length = 392 Score = 249 bits (635), Expect = 7e-64, Method: Compositional matrix adjust. Identities = 154/357 (43%), Positives = 217/357 (60%), Gaps = 3/357 (0%) Query: 43 WCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFS 102 + ++N NN+ ++ G FL AGF I Q ++ Y+ SYA LVG NT ++ Sbjct: 37 YLIHNTTNNLASRGITSGFSFLERNAGFGIVQHLIDYSEGDSYARVFLVGLTNTLLVSAL 96 Query: 103 GMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHS 162 ++ A+++G VG RLS N L+ + VYVE FRNIPPL+ IFF Y +VL LP P + Sbjct: 97 CIVFASLLGFFVGLARLSDNWLLRKLSTVYVETFRNIPPLLQIFFWYFAVLRNLPGPRQA 156 Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222 + F++NRGL P F+ + +L +S R ++ KTG+ L Sbjct: 157 LHAFDLAFVSNRGLYIPWPEYSAGTVPFLLALLLATAISTALFRYNKQRQLKTGR-LRRT 215 Query: 223 YISTFLIFGL-PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281 + +T + L P ++ +H+D P L FNF GG + PE +L +ALS YT+ FI Sbjct: 216 WPATVAMLALFPLAAILLAGSPMHWDIPQLRGFNFRGGFVLIPELAALTLALSIYTSTFI 275 Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341 AE++RSG+ +VP GQ EAA +LGL H V++PQA+R IIPPLTSQYLN++KNSSLA Sbjct: 276 AEVIRSGIQSVPLGQHEAASSLGLPHTVTLHQVIIPQALRVIIPPLTSQYLNIVKNSSLA 335 Query: 342 VAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 A+G+ D+VS+ GT++NQTGQAIE I I M +YL +S+ I+L MN N KIAL E+ Sbjct: 336 AAIGYPDMVSLFAGTVLNQTGQAIETIAITMGVYLIISLSISLLMNIYNRKIALIER 392 >gi|254512406|ref|ZP_05124473.1| glutamate/glutamine/aspartate/asparagine transport system permease protein [Rhodobacteraceae bacterium KLH11] gi|221536117|gb|EEE39105.1| glutamate/glutamine/aspartate/asparagine transport system permease protein [Rhodobacteraceae bacterium KLH11] Length = 410 Score = 248 bits (632), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 159/393 (40%), Positives = 234/393 (59%), Gaps = 18/393 (4%) Query: 21 DMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYT 80 D R +++ Q+I A+ + + + NN+ N+ + L++ FL E AG++++Q +V Y Sbjct: 20 DTRYRSLTFQVIAAIAIALSIWYLGNNLIQNLRAAGLNISYAFLGETAGYDVNQRLVEYN 79 Query: 81 SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140 S SS+ A LVG +NT +AF I AT+ G + G RLS N LV+ + VYVE+FRNIP Sbjct: 80 SQSSHGRAALVGLLNTLLVAFLACITATVFGVIAGVLRLSNNWLVSKLMAVYVEIFRNIP 139 Query: 141 PLVVIFFLYKSVLSVLPIPDH------SIVLPFGMF-LNNRGLSFPTLTMDT----NAKI 189 L+ I ++ + +VLP P+ S + F F NRG+ P + + Sbjct: 140 VLIWIIIIFTIMTAVLPAPNAFRGENPSSSMLFDAFAFTNRGVYLPKPEFANGLFGSTAL 199 Query: 190 FVFSFVLGIVLSLFATR----LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH 245 + +V S FATR + E+TG P + T ++ +P VL+ + L Sbjct: 200 NWLLVIAALVGSWFATREIGKKATKKQEETGDR-PNTTLLTLAVWIVP-FVLLMIIMGLT 257 Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305 ++ P L +FNF GG V ++L+ ALS YT AFIAE VR+G+ A+ +GQ EAA ALGL Sbjct: 258 WNVPELKRFNFSGGLNVGGPLIALWFALSIYTGAFIAENVRAGIQAISKGQTEAAGALGL 317 Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV-SVGGTIINQTGQAI 364 + LV+LPQA+R IIPPL SQYLN+ KNSSLA+AVG+AD+ ++GGT +NQTG+AI Sbjct: 318 RSGRIMNLVVLPQALRVIIPPLISQYLNITKNSSLAIAVGYADITATLGGTTLNQTGRAI 377 Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 E +L+ M YL+ S+ I++ MN NA + LKE+ Sbjct: 378 ECVLLLMLFYLTASLTISMVMNVYNASVKLKER 410 >gi|300865205|ref|ZP_07110023.1| polar amino acid ABC transporter, inner membrane subunit [Oscillatoria sp. PCC 6506] gi|300336796|emb|CBN55173.1| polar amino acid ABC transporter, inner membrane subunit [Oscillatoria sp. PCC 6506] Length = 401 Score = 247 bits (630), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 152/383 (39%), Positives = 226/383 (59%), Gaps = 2/383 (0%) Query: 17 KFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGI 76 K L D R ++ Q I A+L+ V NN+ N+ + ++LG FL +A F+I + I Sbjct: 19 KLLRDDRFWKVAGQAIAAILVVVFAAIIWNNLTANLRQLGINLGFDFLGSQASFDIGESI 78 Query: 77 VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136 +PY +S+A A+LVG VN+F + G++ ATI+G VG RLS N LV + +YVE+ Sbjct: 79 IPYNPSNSFAQAMLVGLVNSFRVMGVGLVTATIVGLTVGIARLSDNWLVRNLATIYVEIL 138 Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196 RN P L+ +FF Y +V LP + S +L N G++ P LT + +++ + Sbjct: 139 RNTPLLLQLFFWYFAVFISLPRLESSTPFLGSFYLTNLGIAIPWLTGNPGTGLWLILLAV 198 Query: 197 GIVLSLFATRLSRHFHEKTGKA-LPLLYISTFLIFGLPTLVLIALKYQLHFDKP-VLGQF 254 GI+ +++ R +TG A ++ S ++ +I D P V+ + Sbjct: 199 GILAAVWLWRWRTRVRLETGAAGRQFIWASGAILLTAIIAFIITRNPPFTLDIPRVIERT 258 Query: 255 NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLV 314 GG ++PEF +L L+ YTA+FIAEIVR+G+ +VP+GQ EA ALGL RLV Sbjct: 259 QLEGGLKLTPEFATLLTGLTLYTASFIAEIVRAGIQSVPQGQWEAGKALGLKSGLMMRLV 318 Query: 315 LLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374 +LPQA+R IIPPLTSQYLNL KNSSLAVA+G+ D+ V T NQTG+ +E++L+ M Y Sbjct: 319 ILPQALRVIIPPLTSQYLNLAKNSSLAVAIGYPDVYFVASTTFNQTGRVVEVMLLIMVTY 378 Query: 375 LSLSIMIALFMNRLNAKIALKEK 397 L++S+ IA+ MN N + +KE+ Sbjct: 379 LTISLSIAIVMNLYNRSVQIKER 401 >gi|288959841|ref|YP_003450181.1| general L-amino acid transport system permease protein [Azospirillum sp. B510] gi|288912149|dbj|BAI73637.1| general L-amino acid transport system permease protein [Azospirillum sp. B510] Length = 406 Score = 247 bits (630), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 151/353 (42%), Positives = 212/353 (60%), Gaps = 4/353 (1%) Query: 46 NNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMI 105 +N NME+ ++ G FL AGFEI + ++ Y SYA A+LVG +NT +A +G + Sbjct: 58 SNTLANMERFGITPGFAFLGRPAGFEIGEALLDYRPQDSYALALLVGLLNTVKVAVAGCL 117 Query: 106 PATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVL 165 AT++G L+G RLS N L++ + + YVE+ R+ P L+ +FF + + LP P ++ Sbjct: 118 IATVLGVLLGVARLSGNALLSGLVQGYVELVRSTPLLLQLFF-WSATFQALPSPRQALNP 176 Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225 G+FL NRG+ P + + L +VL+L T L R + +P + Sbjct: 177 LPGVFLCNRGIQLPAFADGRAGGALLAAIGLALVLALAGTALRRRMGLRD---VPSAAMV 233 Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285 FGLP L++ L + P L FNF GG+TVSPEF +L + L AA IAEIV Sbjct: 234 AAAAFGLPITPLLSSGVPLQVEFPELSGFNFNGGTTVSPEFSALLVGLVVNAAAMIAEIV 293 Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345 RSG+ AVP GQ EAA ALGL R+ +LV+LPQAMR I+P LTS YLNL KNSSLAVA+G Sbjct: 294 RSGIQAVPAGQWEAARALGLPRRRIMQLVVLPQAMRVIVPLLTSSYLNLTKNSSLAVAIG 353 Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 F DLVSV T NQTGQ +E + I M YL++++ +++ MN N ++A + + Sbjct: 354 FPDLVSVINTSANQTGQVLETMAIMMGAYLTMNLAVSVAMNLYNRRLAARGAR 406 >gi|126724900|ref|ZP_01740743.1| binding-protein-dependent transport systems inner membrane component [Rhodobacterales bacterium HTCC2150] gi|126706064|gb|EBA05154.1| binding-protein-dependent transport systems inner membrane component [Rhodobacterales bacterium HTCC2150] Length = 391 Score = 246 bits (629), Expect = 4e-63, Method: Compositional matrix adjust. Identities = 157/388 (40%), Positives = 227/388 (58%), Gaps = 12/388 (3%) Query: 21 DMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYT 80 D R +++ Q I A+ L +I + NNV N+ K L++ FL +AG++I+Q ++PY+ Sbjct: 5 DTRYRSLTFQAIAAIALALIIFYLANNVATNLAKLGLNIDFSFLGAQAGYDINQTLIPYS 64 Query: 81 SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140 S S+ +A VG +NT +AF I ATI G L G RLS N LV + YVE+FRNIP Sbjct: 65 SQSTNLSAAFVGILNTLLVAFLACITATIFGVLAGVLRLSNNWLVRKLMSFYVEIFRNIP 124 Query: 141 PLVVIFFLYKSVLSVLPIP------DHSIVLPFGMF-LNNRGLSFPTLTMDTNAKIFVFS 193 L+ I +Y + L P + S L G+F NRG+ P + + V + Sbjct: 125 VLIWILMIYGVMTISLSGPKAYLGAEPSKELFLGLFAFTNRGIYVPAPIWGPGSMVVVVT 184 Query: 194 FVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ---LHFDKPV 250 F+L ++ + R + + +TGK LP + T I +PT+ + + Q L P+ Sbjct: 185 FILSVIAVIAYRRYATNLLYRTGKLLPT-GLPTIAILLIPTIFMFFVMGQPIGLDLPDPL 243 Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 +FN GG + ++++ ALS YT AFIAE VR+G+ AV +GQ EAA ALGL + Sbjct: 244 ANRFNLRGGLQIGAPLIAIWFALSIYTGAFIAENVRAGIQAVSKGQTEAAAALGLRSARI 303 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV-SVGGTIINQTGQAIEIILI 369 LV+LPQA+R IIPPL SQYLN+ KNSSLA+ VG+AD+ ++GG +NQTG+AIE IL+ Sbjct: 304 MSLVVLPQALRVIIPPLISQYLNITKNSSLAILVGYADVTATLGGITLNQTGRAIECILL 363 Query: 370 WMFIYLSLSIMIALFMNRLNAKIALKEK 397 M YL +S+ I+ +N N I LKE+ Sbjct: 364 LMLFYLIISLTISSVINVYNNSIKLKER 391 >gi|238798511|ref|ZP_04641990.1| L-amino acid ABC transporter permease protein [Yersinia mollaretii ATCC 43969] gi|238717673|gb|EEQ09510.1| L-amino acid ABC transporter permease protein [Yersinia mollaretii ATCC 43969] Length = 400 Score = 246 bits (629), Expect = 4e-63, Method: Compositional matrix adjust. Identities = 157/371 (42%), Positives = 221/371 (59%), Gaps = 5/371 (1%) Query: 30 QIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAI 89 QII L+L + ++N N+ ++ G FL+ AGF I Q ++ Y +Y Sbjct: 32 QIIALLILIGCGAYLIHNTITNLSTRGITSGFAFLNNSAGFGIVQHLIDYKQGDTYGRVF 91 Query: 90 LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 VG NT ++ + A+I+G +G RLS N L+ + +Y+E+FRNIPPL+ IFF Y Sbjct: 92 FVGLFNTLLVSVLCIFFASILGFFIGLARLSDNWLLRKLSTIYIEIFRNIPPLLQIFFWY 151 Query: 150 KSVLSVLPIPDHSIVLPFGM-FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS 208 +VL LP P S+ FG+ FL+NRGL P+ + + +L + ++FA Sbjct: 152 FAVLRNLPGPRQSMD-AFGVAFLSNRGLYLPSPEWAAGFMPALIAVLLAVA-AMFALYRY 209 Query: 209 RHFHE-KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFM 267 HF + TG+ I L+ LP L LH+D P L FNF GG + PE Sbjct: 210 NHFRQLHTGQFHRTWPIGLLLLIALPALSHFMFGPALHWDIPELRGFNFKGGLVLIPELA 269 Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327 +L +ALS YT+ FIAE++RSG+ +VP GQ EAA +L L + R V+LPQA+R IIPPL Sbjct: 270 ALTLALSVYTSTFIAEVIRSGIQSVPYGQHEAARSLALPNTVTLRQVILPQALRVIIPPL 329 Query: 328 TSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386 TSQYLN++KNSSLA A+G+ D+VS+ GT++NQTGQAIE I I M +YL +S+ I+ MN Sbjct: 330 TSQYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAITMSVYLVISLSISFLMN 389 Query: 387 RLNAKIALKEK 397 N +IAL E+ Sbjct: 390 IYNRRIALVER 400 >gi|312170821|emb|CBX79081.1| putative ABC transport system, inner membrane component [Erwinia amylovora ATCC BAA-2158] Length = 392 Score = 246 bits (627), Expect = 7e-63, Method: Compositional matrix adjust. Identities = 154/357 (43%), Positives = 217/357 (60%), Gaps = 3/357 (0%) Query: 43 WCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFS 102 + ++N NN+ ++ G FL AGF I Q ++ Y+ SYA LVG NT ++ Sbjct: 37 YLIHNTTNNLASRGITSGFSFLERSAGFGIVQHLIDYSEGDSYARVFLVGLTNTLLVSAL 96 Query: 103 GMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHS 162 ++ A+++G +G RLS N L+ + +YVE FRNIPPL+ IFF Y +VL LP P + Sbjct: 97 CILFASLLGFFIGLARLSGNWLLRKLSTIYVETFRNIPPLLQIFFWYFAVLRNLPGPRQA 156 Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222 + F++NRGL P F+ + +L + +S R ++ KTG+ L Sbjct: 157 LNAFDLAFVSNRGLYIPWPEYAAGTVPFLLALLLAMAISSALFRYNKQRQLKTGR-LRRT 215 Query: 223 YISTFLIFGLPTLVLIALK-YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281 + +T + L L I L +H+D P L FNF GG + PE +L +ALS YT+ FI Sbjct: 216 WPATVAMLALFPLATIMLAGSPMHWDIPQLHGFNFRGGFALIPELAALTLALSIYTSTFI 275 Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341 AE++RSG+ +VP GQ EAA +LGL V++PQAMR IIPPLTSQYLN++KNSSLA Sbjct: 276 AEVIRSGIQSVPLGQHEAASSLGLPRAVTLHQVIIPQAMRVIIPPLTSQYLNIVKNSSLA 335 Query: 342 VAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 A+G+ D+VS+ GT++NQTGQAIE I I M +YL +S+ I+L MN N KIAL E+ Sbjct: 336 AAIGYPDMVSLFAGTVLNQTGQAIETIAITMGVYLIISLSISLLMNIYNRKIALIER 392 >gi|307129010|ref|YP_003881026.1| putative transport system permease [Dickeya dadantii 3937] gi|306526539|gb|ADM96469.1| Putative transport system permease protein [Dickeya dadantii 3937] Length = 392 Score = 245 bits (625), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 150/356 (42%), Positives = 220/356 (61%), Gaps = 1/356 (0%) Query: 43 WCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFS 102 + ++N N+ + ++ G FL+ A F I Q ++ Y +YA +VG +NT ++ Sbjct: 37 YLLHNTVTNLAQRGITSGFAFLNNSADFGIVQHLIDYEQGDTYARVFVVGLLNTLLVSAI 96 Query: 103 GMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHS 162 ++ A+++G +VG RLS N L+ + +Y+E FRNIPPL+ IFF Y +VL LP P + Sbjct: 97 CIVCASLLGFIVGLARLSDNWLLRKLSTIYIETFRNIPPLLQIFFWYFAVLRNLPGPRQA 156 Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222 + FL+NRGL P A + + ++ +V+ R ++ +H TG+ Sbjct: 157 VNALDTFFLSNRGLYIPAAEFGPGALPSILALIIALVVGAMIFRRNKRYHALTGQQRRSW 216 Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282 I ++ L L + LH+D PVL FNF GG + PE +L +ALS YT++FIA Sbjct: 217 PIPLAVLVVLLGLSHLIFGRALHWDFPVLKGFNFSGGMVLIPELAALALALSVYTSSFIA 276 Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342 EI+RSG+ +V GQ EAA++LGL R V+LPQA+R IIPPLTSQYLN++KNSSLA Sbjct: 277 EIIRSGIQSVSYGQHEAALSLGLPKPVTLRKVILPQALRVIIPPLTSQYLNVVKNSSLAA 336 Query: 343 AVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 A+G+ D+VS+ GT++NQTGQAIE I I M +YL +S++I+L MN N KIAL E+ Sbjct: 337 AIGYPDMVSLFAGTVLNQTGQAIETIAITMSVYLIISLLISLLMNIYNRKIALIER 392 >gi|149203334|ref|ZP_01880304.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Roseovarius sp. TM1035] gi|149143167|gb|EDM31206.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Roseovarius sp. TM1035] Length = 404 Score = 245 bits (625), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 154/393 (39%), Positives = 221/393 (56%), Gaps = 8/393 (2%) Query: 13 FSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEI 72 F +YD R + + Q I +LL ++ + N+ NN+ ++ GFLS A ++I Sbjct: 12 FQLSMLIYDTRYRSYTFQFIALVLLMLLLGYLGANLVNNLAAQGQNISFGFLSNPANYDI 71 Query: 73 DQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVY 132 +Q + Y S SS+ A LVG +NT +AF G ATI G G RLS N LV + Y Sbjct: 72 NQRPIEYDSQSSHLRASLVGVINTLIVAFLGCATATIFGVTAGVLRLSPNWLVRKLMAFY 131 Query: 133 VEVFRNIPPLVVIFFLYKSVLSVLPIPDH------SIVLPFGMF-LNNRGLSFPTLTMDT 185 VE+FRNIP L+ I ++ + +VLP P+ + F F NRG+ P Sbjct: 132 VEIFRNIPVLIWILIIFTVMTAVLPSPNQFRGDNADASMLFDAFAFTNRGIYTPAPVWGP 191 Query: 186 NAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH 245 + + V +F+ I R + TG+ LP+ + S ++F L+ L + Sbjct: 192 GSLVVVLTFLASIFGVFAYRRYATKLLYDTGRLLPMGWPSLVILFVPTILIYFVLGQPIS 251 Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305 + P L FNF GG + ++L+ AL+ YT AFIAE VR+G+ AV +GQ EAA +LGL Sbjct: 252 LNYPALKGFNFDGGLHIRGSLIALWFALAIYTGAFIAENVRAGIQAVSKGQTEAAASLGL 311 Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV-SVGGTIINQTGQAI 364 + LV+LPQA+R IIPPL SQYLNL KNSSLA+AVG+ D+ ++GG +NQTG+AI Sbjct: 312 RPNRIMNLVILPQALRVIIPPLISQYLNLTKNSSLAIAVGYMDVTGTLGGITLNQTGRAI 371 Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 E +L+ M YL++S+ I+ MN N I LKE+ Sbjct: 372 ECVLMLMLFYLTISLAISAIMNVYNNSIKLKER 404 >gi|292486753|ref|YP_003529623.1| putative ABC transporter inner membrane protein [Erwinia amylovora CFBP1430] gi|292900845|ref|YP_003540214.1| ABC transporter permease [Erwinia amylovora ATCC 49946] gi|291200693|emb|CBJ47826.1| ABC transporter, permease protein [Erwinia amylovora ATCC 49946] gi|291552170|emb|CBA19207.1| putative ABC transport system, inner membrane component [Erwinia amylovora CFBP1430] Length = 392 Score = 245 bits (625), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 149/356 (41%), Positives = 214/356 (60%), Gaps = 1/356 (0%) Query: 43 WCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFS 102 + ++N NN+ ++ G FL AGF I Q ++ Y+ SYA LVG NT ++ Sbjct: 37 YLIHNTTNNLASRGITSGFSFLERSAGFGIVQHLIDYSEGDSYARVFLVGLTNTLLVSAL 96 Query: 103 GMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHS 162 ++ A+++G +G RLS N L+ + +YVE FRNIPPL+ IFF Y +VL LP P + Sbjct: 97 CILFASLLGFFIGLARLSGNWLLRKLSTIYVETFRNIPPLLQIFFWYFAVLRNLPGPRQA 156 Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222 + F++NRGL P F+ + +L + +S R ++ KTG+ Sbjct: 157 LNAFDLAFVSNRGLYIPWPEYAAGTVPFLLALLLAMAISSALFRYNKQRQLKTGRLRRTW 216 Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282 + ++ P ++ +H+D P L FNF GG + PE +L +ALS YT+ FIA Sbjct: 217 PAAVAMLALFPLATIMLAGSPMHWDIPQLHGFNFRGGFALIPELAALTLALSIYTSTFIA 276 Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342 E++RSG+ +VP GQ EAA +LGL V++PQAMR IIPPLTSQYLN++KNSSLA Sbjct: 277 EVIRSGIQSVPLGQHEAASSLGLPRAVTLHQVIIPQAMRVIIPPLTSQYLNIVKNSSLAA 336 Query: 343 AVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 A+G+ D+VS+ GT++NQTGQAIE I I M +YL +S+ I+L MN N KIAL E+ Sbjct: 337 AIGYPDMVSLFAGTVLNQTGQAIETIAITMGVYLIISLSISLLMNIYNRKIALIER 392 >gi|254452143|ref|ZP_05065580.1| binding-protein-dependent transport systems inner membrane component [Octadecabacter antarcticus 238] gi|198266549|gb|EDY90819.1| binding-protein-dependent transport systems inner membrane component [Octadecabacter antarcticus 238] Length = 410 Score = 244 bits (624), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 163/405 (40%), Positives = 235/405 (58%), Gaps = 26/405 (6%) Query: 13 FSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEI 72 F + +YD R +I++Q+I +LL W VNN N+ GFL++ AG++I Sbjct: 12 FRLSQLIYDTRYRSITIQVIATILLLAGIYWLVNNTIQNLAALGKDFDFGFLTQPAGYDI 71 Query: 73 DQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVY 132 +Q +V YTS S++ A +VG +NT +AF G + AT +G G RLS N +V+ + VY Sbjct: 72 NQRLVEYTSQSTHGMAAVVGILNTLLVAFLGCLLATFLGVTAGVLRLSNNWVVSRLMAVY 131 Query: 133 VEVFRNIPPL---VVIFFLYKSVLSVLPIPDHSIVLPFGMFLN------NRGLSFPTLTM 183 VE FRN+P L + I L +S I + + GM LN NRG+ P + + Sbjct: 132 VEGFRNVPLLLWIIAIMALMTEGMS--RIREFRVGGDAGMILNDSVAVTNRGVYIPGIIL 189 Query: 184 D-----TNAKIFVFSFVLGIVLSLFATRLSRH----FHEKTGKALPLLYISTFLIFGLPT 234 + ++A ++ V+ +V+SLF R R E TG P + I +P Sbjct: 190 ENGFLASSAMNWLILLVI-LVISLFVIRGIRRRANAVQEDTG-VRPTTWYQQLSILIVPV 247 Query: 235 -LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293 LV+I + +L + P L FNF G + ++L++ALS YT AFIAEIVR+G++A+ Sbjct: 248 GLVMILMGAELQY--PELRGFNFSDGIHLRNSLIALWLALSLYTGAFIAEIVRAGILAIS 305 Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS-V 352 +GQ EAA ALGL + T LV+LPQAMR IIPPL SQYLNL KNSSLA+AVG+ D+ S + Sbjct: 306 KGQSEAAFALGLRPNRTTSLVILPQAMRVIIPPLISQYLNLTKNSSLAIAVGYMDVRSTL 365 Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 GG INQTG+ +E +L+ YL LS++I+ MN N + L+E+ Sbjct: 366 GGITINQTGRELEGMLLLGAFYLVLSLVISGAMNVYNNRTQLQER 410 >gi|218510921|ref|ZP_03508799.1| binding-protein dependent transport system inner membrane protein [Rhizobium etli Brasil 5] Length = 409 Score = 244 bits (623), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 154/397 (38%), Positives = 220/397 (55%), Gaps = 9/397 (2%) Query: 5 ARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCV---NNVYNNMEKSNLSLGI 61 +RK FS+ FL +R + A+ L + C NNV M++ L LG Sbjct: 17 SRKRYEPGFSKPGFLASVRQWLGPSPFLQAVFLFAVLAVCWYLGNNVVETMQRLGLRLGF 76 Query: 62 GFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSA 121 FLS+RA FEI + ++ Y+S +YA A+L G +NT +AF + AT+ G ++G RLS Sbjct: 77 AFLSQRANFEIGESLITYSSSDTYARALLAGLLNTINVAFFACVIATVCGVMLGVARLSG 136 Query: 122 NKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTL 181 N ++A + R YVE+FRN P L++ FL+ ++ LP P ++ G FL+NRG+ P L Sbjct: 137 NLVLASVVRAYVEIFRNTP-LLLQLFLWSAIFHSLPAPRRALEFSGGFFLSNRGIFIPRL 195 Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALK 241 D F++ + + R F + A +L +S + V A Sbjct: 196 IFD-GPSAFIWLPLAAAAAGVTIIIARRLFFGQRFYATRILVLSVAMF----AAVCWATG 250 Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301 + + PV G FN GG +++PEF L L AA IAEIVRSG+ +V GQ EAA Sbjct: 251 VSISAEPPVRGGFNISGGMSLTPEFAGLLTGLVFNAAATIAEIVRSGIQSVGNGQWEAAR 310 Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361 ALGL RL++LPQA+R I P +TS YL+L KNSSLAVA+GF DLVSV T N TG Sbjct: 311 ALGLRPGHIMRLIVLPQALRVITPLMTSSYLDLTKNSSLAVAIGFPDLVSVANTTANTTG 370 Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 Q +E I I YL+L++ +++ MN N +I L+E++ Sbjct: 371 QTLEAITIIAVAYLTLNLAVSVLMNLYNRRIMLREER 407 >gi|313902269|ref|ZP_07835674.1| amino acid ABC transporter membrane protein 1, PAAT family [Thermaerobacter subterraneus DSM 13965] gi|313467420|gb|EFR62929.1| amino acid ABC transporter membrane protein 1, PAAT family [Thermaerobacter subterraneus DSM 13965] Length = 392 Score = 244 bits (623), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 145/348 (41%), Positives = 204/348 (58%), Gaps = 1/348 (0%) Query: 43 WCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFS 102 + NV N+++ ++ G FL A F I + +PY + Y A L G VNT +A Sbjct: 37 YLFGNVQRNLQQLGITPGFDFLRHPASFAIGESSIPYQATDPYGRAFLAGLVNTLRVAVL 96 Query: 103 GMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHS 162 G++ AT +G + G RLSAN LV + +YVEV RN P L+ +FF Y +++ LP + Sbjct: 97 GVVLATAVGVVAGLARLSANGLVRLLASLYVEVTRNTPLLLQLFFWYGAIVYTLPPASQA 156 Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKAL-PL 221 + LP +FL NRGL P V L +V + A R+ + G+A P Sbjct: 157 LALPGSVFLMNRGLVLPAPRPGPGFPTAVAILGLALVAAATAYRILLRKRLEEGRATRPG 216 Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281 L L G ++ L ++P L +FNF GG +S EF +L +AL YT AFI Sbjct: 217 LVALGLLAAGGLAAAILPAGPALVLERPQLARFNFQGGLMLSAEFTALLLALVIYTGAFI 276 Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341 AE+VR G++AVPRGQ EAA +LGL+ RLV+ PQA+R I+PPLTSQYLNL+KNSSLA Sbjct: 277 AEVVRGGVLAVPRGQWEAARSLGLSPFLVQRLVVFPQALRIIVPPLTSQYLNLIKNSSLA 336 Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 +AV F DL++V TI+NQTG+ +E++L+ YL+ S++ +L MN N Sbjct: 337 MAVAFPDLLNVSSTIVNQTGRTLEMLLLVGATYLAFSLLTSLLMNLYN 384 >gi|259416750|ref|ZP_05740670.1| glutamate/glutamine/aspartate/asparagine transport system permeaseprotein BztB [Silicibacter sp. TrichCH4B] gi|259348189|gb|EEW59966.1| glutamate/glutamine/aspartate/asparagine transport system permeaseprotein BztB [Silicibacter sp. TrichCH4B] Length = 422 Score = 244 bits (622), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 149/410 (36%), Positives = 235/410 (57%), Gaps = 34/410 (8%) Query: 18 FLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIV 77 +YD R + ++Q++ + ++ ++N +N+ FLSE AG++I+Q ++ Sbjct: 17 LIYDTRYRSATIQVVAMIGFMILIGSIISNTVHNLTDLGKEPSFSFLSEPAGYDINQRLL 76 Query: 78 PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137 Y + S+ A L+G +NT +A G I ATI+G ++G RLS+N LVA + +YVE+FR Sbjct: 77 DYDNQDSHMRASLIGLLNTLVVAVLGCITATILGVIIGVLRLSSNWLVARLMTIYVEMFR 136 Query: 138 NIPPLVVIFFLYKSVLSVLPIP---------------------DHSIVLPFGMFLNNRG- 175 N+P L+ I F+ ++ LP P + + +P +F N+ G Sbjct: 137 NVPVLLWIVFIMAILIETLPAPRAFRGDAPEATMSVFDSVAVTNRGVYVPEPLFHNSLGN 196 Query: 176 ---LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHF----HEKTGKALPLLYISTFL 228 L D + + F VLG SL+A+ R + E TG+ + +I + Sbjct: 197 VHVFGDSALRFDVSLDLMAFLIVLGG--SLYASMRIRKWADALQESTGRRPTIWHIRAAV 254 Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288 + L+++ L + H P L FNF GG+ + ++L++ALS YTAAFIAEIVRSG Sbjct: 255 VIVPSALLMLVLGF--HLGYPELKGFNFSGGTHLRNSLIALWLALSLYTAAFIAEIVRSG 312 Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348 ++A+ +GQ EAA ALGL ++ LV+LPQA+R IIPPL S YLNL KNSSLA+AVG+ D Sbjct: 313 ILAISKGQTEAAAALGLRPKRIMNLVVLPQALRVIIPPLISNYLNLTKNSSLAIAVGYMD 372 Query: 349 LV-SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 L ++ G +NQTG+ +E +L+ M +YL++S++I+ MN N ++ L E+ Sbjct: 373 LTGTLMGITMNQTGRELETVLLGMLVYLTISLLISSAMNWYNNRVKLVER 422 >gi|302339787|ref|YP_003804993.1| polar amino acid ABC transporter inner membrane subunit [Spirochaeta smaragdinae DSM 11293] gi|301636972|gb|ADK82399.1| polar amino acid ABC transporter, inner membrane subunit [Spirochaeta smaragdinae DSM 11293] Length = 389 Score = 244 bits (622), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 139/359 (38%), Positives = 216/359 (60%), Gaps = 15/359 (4%) Query: 47 NVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIP 106 N N+ N+ +G GF+ E AGF I Q ++ YT ++ ++G +NT + G++ Sbjct: 29 NYIRNITSRNIGIGFGFMHETAGFSISQTLISYTESDTFGRTFVIGLLNTLVASIIGIVL 88 Query: 107 ATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSV-LSVLPIPDHSIVL 165 AT++G L+G RLS NKL+ + VYVEV RNIPPL+ + F Y+ V L+VLP S L Sbjct: 89 ATLLGFLIGLMRLSKNKLIHNVAVVYVEVLRNIPPLLHVLFWYQVVFLNVLPPFKESFKL 148 Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS-----RHFHEKTGKALP 220 +++N RG++ P+ T+A F F + IV + + R H+K Sbjct: 149 GNWLYINVRGITIPSFIPQTSATTFRILFFVSIVAIFYIGYVKKKMVLRGVHKK------ 202 Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280 L + ++ L IA +Q+ P + +F F G+T+ PE S+ +AL YT+ + Sbjct: 203 LWPLQLAILLALVLFAAIAKPFQIVL--PEITKFKFSSGTTIRPELFSVVVALGTYTSTY 260 Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340 I+E VRS +IAVP+GQ+EAA +LG + +L+++PQAMR++IPP+T+QYLNL+KN+SL Sbjct: 261 ISEAVRSSIIAVPKGQLEAAKSLGFNRYRRLQLIIIPQAMRTMIPPVTNQYLNLIKNTSL 320 Query: 341 AVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 +AV + DL SV GT +NQTG+A+E++ + M YLS+S++ +L MN N I K+ + Sbjct: 321 GMAVAYPDLTSVFAGTTLNQTGRALEVMSLVMLTYLSISLVTSLLMNWYNRSIINKKGE 379 >gi|255263937|ref|ZP_05343279.1| glutamate/glutamine/aspartate/asparagine transport system permeaseprotein BztB [Thalassiobium sp. R2A62] gi|255106272|gb|EET48946.1| glutamate/glutamine/aspartate/asparagine transport system permeaseprotein BztB [Thalassiobium sp. R2A62] Length = 398 Score = 243 bits (620), Expect = 4e-62, Method: Compositional matrix adjust. Identities = 161/398 (40%), Positives = 229/398 (57%), Gaps = 21/398 (5%) Query: 19 LYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVP 78 L D R +++ Q+I A+ L L+ NN+ N+ LS+ FL AG++I+Q ++ Sbjct: 3 LNDTRYRSLTFQVIAAIALAFSILYLANNLARNLADQGLSISFAFLGAPAGYDINQRLIE 62 Query: 79 YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138 YTS S+ A VG +NT +AF + ATI G L G RLS N LVA I YVE+FRN Sbjct: 63 YTSQSTNLRAAFVGILNTLLVAFLACVTATIFGVLAGVLRLSKNWLVAKIMAFYVEIFRN 122 Query: 139 IPPLVVIFFLYKSVLSVLPIP------DHSIVLPFGM-FLNNRGLSFPT--LTMDTNAK- 188 IP L+ I ++ + +VLP P D + + G+ NRG+ P T A Sbjct: 123 IPVLIWIIIIFTIMTAVLPGPRAFRGDDATASMFLGVSAFTNRGIYIPGPYFTRGFGAAE 182 Query: 189 ---IFVFSFVLGI-VLSLFATRL----SRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240 ++ + VLG+ V S F R + E TG L + + FG L+++AL Sbjct: 183 LGAVWDWVLVLGLLVASFFGARAVNARATRIQEATGIRPATLTTNLAIWFG--PLIVVAL 240 Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300 L F+ P L FNF GG V ++++ ALS YT AFIAE VR+G++AV +GQ EAA Sbjct: 241 ALGLTFEIPELKGFNFKGGIKVGGPLIAIWFALSIYTGAFIAENVRAGILAVSKGQTEAA 300 Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL-VSVGGTIINQ 359 ALG+ + LV+LPQA+R IIPPL S YLN+ KNSSLA+ VG+AD+ ++GG +NQ Sbjct: 301 AALGIRPGRIMSLVILPQALRVIIPPLISNYLNITKNSSLAILVGYADVTATLGGITLNQ 360 Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 TG+AIE +L+ M YL +S++I+ +N N + LKE+ Sbjct: 361 TGRAIECVLLLMLFYLVISLLISGIINIYNNSVKLKER 398 >gi|254440396|ref|ZP_05053890.1| ABC transporter, permease protein, putative [Octadecabacter antarcticus 307] gi|198255842|gb|EDY80156.1| ABC transporter, permease protein, putative [Octadecabacter antarcticus 307] Length = 410 Score = 243 bits (619), Expect = 5e-62, Method: Compositional matrix adjust. Identities = 154/402 (38%), Positives = 230/402 (57%), Gaps = 20/402 (4%) Query: 13 FSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEI 72 F + +YD R +I++Q+I +LL W VNN N+ GFL++ AG++I Sbjct: 12 FQLSQLIYDTRYRSITIQVIATILLIAGIYWLVNNTIQNLAALGKDFDFGFLTQPAGYDI 71 Query: 73 DQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVY 132 +Q +V Y+S S++ A VG +NT +AF G + AT++G G RLS N +V+ + VY Sbjct: 72 NQRLVEYSSQSTHGRAAFVGILNTLLVAFLGCVLATVLGVTAGVLRLSNNWVVSRLMAVY 131 Query: 133 VEVFRNIPPL---VVIFFLYKSVLSVLPI----PDHSIVLPFGMFLNNRGLSFPTLTMDT 185 VE FRN+P L + I L +S + D S++L + + NRG+ P + ++ Sbjct: 132 VEGFRNVPLLLWIIAIMALMTEGMSRIREFRVGGDASMILNDSVAVTNRGVYIPGIILEN 191 Query: 186 --------NAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT-LV 236 N I + V+ +++ + S E TG P + I +P LV Sbjct: 192 GFLASSAMNWLILLVILVVSLIVIRGVRKRSDAVQEDTG-VRPNTWYQQLAILIIPVGLV 250 Query: 237 LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296 ++ + +L + P L FNF G + ++L++ALS YT AFIAEIVR+G++A+ +GQ Sbjct: 251 MVLMGAELQY--PELRGFNFSDGIHLRNSLIALWLALSLYTGAFIAEIVRAGILAISKGQ 308 Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS-VGGT 355 EAA ALGL + T LV+LPQAMR IIPPL SQYLNL KNSSLA+AVG+ D+ S +GG Sbjct: 309 SEAAFALGLRPNRTTNLVILPQAMRVIIPPLISQYLNLTKNSSLAIAVGYMDVRSTLGGI 368 Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 INQTG+ +E +L+ YL +S+ I+ MN N + L+E+ Sbjct: 369 TINQTGRELEGMLLLGAFYLLVSLAISGAMNVYNNRTQLQER 410 >gi|238789894|ref|ZP_04633674.1| L-amino acid ABC transporter permease protein [Yersinia frederiksenii ATCC 33641] gi|238721967|gb|EEQ13627.1| L-amino acid ABC transporter permease protein [Yersinia frederiksenii ATCC 33641] Length = 392 Score = 242 bits (617), Expect = 8e-62, Method: Compositional matrix adjust. Identities = 157/371 (42%), Positives = 220/371 (59%), Gaps = 5/371 (1%) Query: 30 QIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAI 89 QII L+L + ++N N+ ++ G FL AGF I Q ++ Y +Y Sbjct: 24 QIIALLILIGCGAYLIHNTLTNLSTRGITSGFAFLHNSAGFGIVQHLIDYQQGDTYGRVF 83 Query: 90 LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 LVG +NT ++ + A+I+G +G RLS N L+ + +Y+E FRNIPPL+ IFF Y Sbjct: 84 LVGLLNTLLVSVLCIFFASILGFFLGLARLSDNWLLRKLSTIYIETFRNIPPLLQIFFWY 143 Query: 150 KSVLSVLPIPDHSIVLPFGM-FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS 208 +VL LP P S+ FG+ FL+NRGL P+ + + +L + R + Sbjct: 144 FAVLRNLPGPRQSLD-AFGVAFLSNRGLYLPSPEFAAGFFPALLAVLLAAAFIIALARYN 202 Query: 209 RHFHE-KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFM 267 HF + TGK + L+ LP L + LH+D P L FNF GG + PE Sbjct: 203 -HFRQLHTGKFHRSWPMGLLLLIVLPALAHLLYGPALHWDLPQLKGFNFKGGLVLIPELA 261 Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327 +L +ALS YT+ FIAE++RSG+ +VP GQ EAA +L L + R V+LPQA+R IIPPL Sbjct: 262 ALTLALSVYTSTFIAEVIRSGIQSVPHGQHEAARSLALPNTVTLRQVILPQALRVIIPPL 321 Query: 328 TSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386 TSQYLN++KNSSLA A+G+ D+VS+ GT++NQTGQAIE I I M +YL +S+ I+ MN Sbjct: 322 TSQYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAITMSVYLVISLSISFLMN 381 Query: 387 RLNAKIALKEK 397 N +IAL E+ Sbjct: 382 LYNRRIALVER 392 >gi|326204745|ref|ZP_08194600.1| polar amino acid ABC transporter, inner membrane subunit [Clostridium papyrosolvens DSM 2782] gi|325985116|gb|EGD45957.1| polar amino acid ABC transporter, inner membrane subunit [Clostridium papyrosolvens DSM 2782] Length = 389 Score = 242 bits (617), Expect = 8e-62, Method: Compositional matrix adjust. Identities = 146/393 (37%), Positives = 228/393 (58%), Gaps = 7/393 (1%) Query: 6 RKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLS 65 RKT T ++ K V I +Q + ++L ++ ++ ++N ++K + LG FL+ Sbjct: 3 RKTTTPLWNNKK------VIPIILQAVFLIVLILLSVFFISNASKGLQKIGIKLGFDFLN 56 Query: 66 ERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLV 125 AGF ID ++ YT SY A+LVG NT + G++ + I+G +G GRLS N LV Sbjct: 57 STAGFSIDDRLINYTPSDSYGRALLVGLFNTLKVGLVGIVISGILGLFIGIGRLSNNWLV 116 Query: 126 AWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDT 185 + YVEV RN P L+ IF LY +V P + +I +F +NRG + P T + Sbjct: 117 KKLTGGYVEVIRNTPLLIQIFILYFAVFLPFPQIERNINFKNIIFFSNRGTAIPWFTTNQ 176 Query: 186 NAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKAL-PLLYISTFLIFGLPTLVLIALKYQL 244 ++ I++ ++G+ ++ ++ + GK + P+ + ++ + ++ L Sbjct: 177 SSGIWLIFAMIGLAAAIVLWKVVLKKQVEIGKNMHPMAWSIGAVLITVIVAYVVTNSPPL 236 Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304 P + + F GG +S EF S+ L Y +AFIAEIVR+G++AVP+GQ+EA ALG Sbjct: 237 QISIPEINKMAFRGGYVLSSEFASILCGLFIYHSAFIAEIVRAGIMAVPKGQIEATKALG 296 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364 + RLV+LPQA R IIP +TSQ+LNL KNS+LA+AVG+ DL S+G TIINQTGQ+I Sbjct: 297 MKKGATMRLVILPQAFRVIIPSVTSQFLNLFKNSTLAIAVGYTDLFSIGNTIINQTGQSI 356 Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 +I+++ IYL +S++I+ MN N L E+ Sbjct: 357 QIMILMASIYLIVSLVISFLMNCFNNYYKLVER 389 >gi|85703852|ref|ZP_01034955.1| glutamate/glutamine/aspartate/asparagine ABC transporter, permease protein [Roseovarius sp. 217] gi|85671172|gb|EAQ26030.1| glutamate/glutamine/aspartate/asparagine ABC transporter, permease protein [Roseovarius sp. 217] Length = 418 Score = 242 bits (617), Expect = 8e-62, Method: Compositional matrix adjust. Identities = 152/394 (38%), Positives = 224/394 (56%), Gaps = 10/394 (2%) Query: 13 FSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEI 72 F +YD R + + Q I +LL ++ + N+ +N+ ++ GFLS+ AG++I Sbjct: 26 FQLSMLIYDTRYRSYTFQFIALMLLLLLLGYLGANLVSNLAAQGQNISFGFLSDPAGYDI 85 Query: 73 DQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVY 132 +Q + Y S SS+ A +VG +NT +A G AT+ G G RLS N LV + VY Sbjct: 86 NQRPIEYDSQSSHMRASVVGVINTLIVAVLGCATATLFGVTAGILRLSPNWLVRKLMAVY 145 Query: 133 VEVFRNIPPLVVIFFLYKSVLSVLPIP--------DHSIVLPFGMFLNNRGLSFPTLTMD 184 VE FRN+P L+ I + + + +P P D S++L F NRG+ P Sbjct: 146 VEAFRNVPVLIWILIIATIMTASMPSPNQFRGDNADASMLLDAFAF-TNRGVYVPAPVWG 204 Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244 + + V +F+ I + R + TG+ LP+ + S ++F L+ L + Sbjct: 205 AGSLVVVLTFLASIAGVFYYRRYATKLLYDTGRLLPMGWPSLVILFVPTILIFFVLGQPI 264 Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304 D P L FNF GG + ++L+ AL+ YT AFIAE VR+G+ AV +GQ EAA +LG Sbjct: 265 TLDYPALKGFNFDGGLHIRGSLIALWFALAIYTGAFIAENVRAGIQAVSKGQTEAAASLG 324 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV-SVGGTIINQTGQA 363 L ++ LV+LPQA+R IIPPL SQYLNL KNSSLA+AVG+ D+ ++GG +NQTG+A Sbjct: 325 LRPKRIMNLVILPQALRVIIPPLISQYLNLTKNSSLAIAVGYMDVTGTLGGITLNQTGRA 384 Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 IE +L+ M YL++S+ I+ MN N I LKE+ Sbjct: 385 IECVLMLMLFYLTISLAISAVMNVYNNTIKLKER 418 >gi|238782939|ref|ZP_04626967.1| amino-acid ABC transporter permease protein yhdX [Yersinia bercovieri ATCC 43970] gi|238716142|gb|EEQ08126.1| amino-acid ABC transporter permease protein yhdX [Yersinia bercovieri ATCC 43970] Length = 400 Score = 241 bits (616), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 156/370 (42%), Positives = 219/370 (59%), Gaps = 3/370 (0%) Query: 30 QIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAI 89 QII L+L + ++N N+ ++ G FL+ AGF I Q ++ Y +Y Sbjct: 32 QIIALLILIGCGAYLIHNTITNLSTRGITSGFAFLNNSAGFGIVQHLIDYEQGDTYGRVF 91 Query: 90 LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 LVG NT ++ + A+I+G +G RLS N L+ + VY+E FRNIPPL+ IFF Y Sbjct: 92 LVGLFNTLLVSVLCIFFASILGFFIGLARLSDNWLLRKLSTVYIETFRNIPPLLQIFFWY 151 Query: 150 KSVLSVLPIPDHSIVLPFGM-FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS 208 +VL LP P S+ FG+ FL+NRGL P+ + + +L + + R + Sbjct: 152 FAVLRNLPGPRQSMD-AFGVAFLSNRGLYLPSPEFAAGFIPALVAVLLAVAAIIALYRYN 210 Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268 TG+ + L+ LPTL + LH+D P L FNF GG + PE + Sbjct: 211 HFRQRHTGQFHRTWPLGLLLLIALPTLAHLMFGPALHWDIPELRGFNFKGGLVLIPELAA 270 Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328 L +ALS YT+ FIAE++RSG+ +VP GQ EAA +L L + R V+LPQA+R IIPPLT Sbjct: 271 LTLALSVYTSTFIAEVIRSGIQSVPYGQHEAARSLALPNTVTLRQVILPQALRVIIPPLT 330 Query: 329 SQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387 SQYLN++KNSSLA A+G+ D+VS+ GT++NQTGQAIE I I M +YL +S+ I+ MN Sbjct: 331 SQYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAITMSVYLVISLSISFLMNL 390 Query: 388 LNAKIALKEK 397 N +IAL E+ Sbjct: 391 YNRRIALVER 400 >gi|86605965|ref|YP_474728.1| polar amino acid ABC transporter permease [Synechococcus sp. JA-3-3Ab] gi|86554507|gb|ABC99465.1| polar amino amino acid ABC transporter (PAAT) family, permease protein [Synechococcus sp. JA-3-3Ab] Length = 390 Score = 241 bits (614), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 138/358 (38%), Positives = 212/358 (59%), Gaps = 15/358 (4%) Query: 46 NNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMI 105 N+ ++ + +SLG FL A F I +G++PY SY A+ VG VNT WL+ ++ Sbjct: 42 QNLLASLRRLGISLGFRFLDNSANFGITEGLIPYDPSESYLKALAVGAVNTLWLSAVSIV 101 Query: 106 PATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVL 165 AT +G ++G RLS+N L + V E+FRN+P L+++ F Y+ V+ LP +S+ + Sbjct: 102 LATAMGFVLGMARLSSNWLARQLATVVTEIFRNVPVLLIVIFWYQGVILTLPGVRNSLSI 161 Query: 166 PFGMFLNNRGLSFPTLTMD---TNAKIFVFSFVLGIVLSLFATRL---SRHFHEKTGKAL 219 +F+N RG+ P L A V + GI L R SR + + Sbjct: 162 GGLVFINQRGVKLPGLDPSGWLVPALAIVIAAGWGIRKLLLVCRPELGSRQRNLWVAAGV 221 Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279 LL ++ +++F P + D PVL +FNF GG +S EF ++ + L YT Sbjct: 222 VLLAVACWVLFPEPPV---------RLDVPVLERFNFRGGIQLSAEFTAMMLGLVTYTGC 272 Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339 +IAE+VR +AVPRGQ EAA A+GL+ + RLV++PQA+R +IP L +QYL L+KNSS Sbjct: 273 YIAEVVRGSFLAVPRGQWEAARAVGLSELQTFRLVIVPQALRIMIPSLNTQYLTLIKNSS 332 Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 LA+AVGF+DL ++ TIINQ+G+++E+ I M YL+ +++++ MN LNA++ L E+ Sbjct: 333 LAIAVGFSDLFNISSTIINQSGRSVEMFAILMATYLTFNLVVSYGMNWLNARVKLVER 390 >gi|258545567|ref|ZP_05705801.1| general amino acid ABC superfamily ATP binding cassette transporter, permease protein [Cardiobacterium hominis ATCC 15826] gi|258519267|gb|EEV88126.1| general amino acid ABC superfamily ATP binding cassette transporter, permease protein [Cardiobacterium hominis ATCC 15826] Length = 387 Score = 240 bits (612), Expect = 3e-61, Method: Compositional matrix adjust. Identities = 153/364 (42%), Positives = 221/364 (60%), Gaps = 11/364 (3%) Query: 42 LWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAF 101 LW N NM L FL AGF + Q ++PY SY ++G +NT ++ Sbjct: 27 LW--RNTAANMAARGLVFSFAFLDNPAGFAVSQHLLPYQESDSYGWLFVIGLLNTLLVSL 84 Query: 102 SGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDH 161 ++ AT++G +VG R+S N L+ + VYVEVFRNIP L+ +FF Y +VL+VLP P Sbjct: 85 LAIVAATLVGVVVGVLRVSRNWLLRKLAAVYVEVFRNIPLLLQLFFWYFAVLAVLPAPRS 144 Query: 162 SIVLPFGM-------FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEK 214 S L G L+NRGLS + + + +G+VL++ R +R + Sbjct: 145 S-TLRLGCDEAGCLAVLSNRGLSLIAPLWQSALQTALALCAVGVVLAVLLARWNRRRQAQ 203 Query: 215 TGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALS 274 +G+ L L + LI LP L +P+L FNF GG T+ PE M+L++ALS Sbjct: 204 SGQVLRLWWAYALLIVALPLAAFALLVEPSQLSRPLLQGFNFRGGVTLLPELMALWLALS 263 Query: 275 CYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNL 334 Y+A++IAE VRSG+ +VPRGQ EAA ALGL + RLV+LPQA+R ++PP+TSQ+LN+ Sbjct: 264 LYSASYIAEYVRSGIASVPRGQYEAAEALGLPPARVMRLVILPQALRVMVPPMTSQFLNI 323 Query: 335 LKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393 +KNSSLA A+ + DLVSV GT +NQTG+A+EII + M +YL++S++I+L M N +I Sbjct: 324 VKNSSLATAIAYPDLVSVFTGTALNQTGRAVEIIGLTMAVYLAISLLISLAMGVYNRRIR 383 Query: 394 LKEK 397 + E+ Sbjct: 384 IVER 387 >gi|86135804|ref|ZP_01054383.1| glutamate/glutamine/aspartate/asparagine ABC transporter, permease protein [Roseobacter sp. MED193] gi|85826678|gb|EAQ46874.1| glutamate/glutamine/aspartate/asparagine ABC transporter, permease protein [Roseobacter sp. MED193] Length = 395 Score = 239 bits (610), Expect = 5e-61, Method: Compositional matrix adjust. Identities = 155/396 (39%), Positives = 235/396 (59%), Gaps = 24/396 (6%) Query: 21 DMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYT 80 D R +++ Q I AL+L + + NN+ N+ + L++ FL +RAG++I+Q ++ Y Sbjct: 5 DTRYRSLTFQAIAALVLALAIWYLGNNLIQNLRAAGLNISYNFLGDRAGYDINQHLIDYD 64 Query: 81 SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140 S SS+A+A +VG +NT +AF I AT+ G + G RLS N LV+ + VYVE+FRNIP Sbjct: 65 SQSSHASAAVVGILNTLLVAFLACITATVFGVVAGVLRLSNNWLVSKLMAVYVEIFRNIP 124 Query: 141 PLVVIFFLYKSVLSVLPIP------DHSIVLPFGMF-LNNRGLSFPTLTMDTN------- 186 L+ I ++ + +V+P P D S + +F NRG+ P ++ Sbjct: 125 VLIWIIIIFTIMTAVMPGPREFRGDDPSASMVLDLFAFTNRGVYTPMPMFESGLFASAAL 184 Query: 187 AKIFVFSFVLGIVLSLFATRL----SRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY 242 + V F++G S F R+ + E TG L+I+ L + L+ L Sbjct: 185 NWLLVLVFLIG---SFFVMRMVNANATQKQEATGIRPNTLFIN--LAVWIVPFALLMLVM 239 Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302 L ++ P L FNF GG + ++L+ ALS YT AFIAE VR+G+ A+ +GQ EAA A Sbjct: 240 GLTWEVPELKGFNFKGGIKIGGPLIALWFALSIYTGAFIAENVRAGIQAISKGQTEAAAA 299 Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV-SVGGTIINQTG 361 LG+ + LV+LPQA+R IIPPL S +LN+ KNSSLA+AVG+AD+ ++GG +NQTG Sbjct: 300 LGMRPGRIMNLVVLPQALRVIIPPLISNFLNITKNSSLAIAVGYADITATLGGVTLNQTG 359 Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 +AIE +L+ M YL++S++I++ MN NA + LKE+ Sbjct: 360 RAIECVLLLMLFYLTVSLLISMVMNVYNASVKLKER 395 >gi|254456261|ref|ZP_05069690.1| amino acid ABC transporter [Candidatus Pelagibacter sp. HTCC7211] gi|207083263|gb|EDZ60689.1| amino acid ABC transporter [Candidatus Pelagibacter sp. HTCC7211] Length = 351 Score = 239 bits (609), Expect = 7e-61, Method: Compositional matrix adjust. Identities = 158/353 (44%), Positives = 216/353 (61%), Gaps = 9/353 (2%) Query: 52 MEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIG 111 ME ++ G GFLS+ + F++ ++ + SY A LVG +NT ++ G+I ATIIG Sbjct: 1 MENRGITFGYGFLSQESSFDVQFSLIEFDGSHSYFRAYLVGLLNTILVSVIGIIFATIIG 60 Query: 112 TLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMF- 170 +VG RLS N L+ VYVE FRNIP L+ IFF Y + L LP+P + + FG+F Sbjct: 61 IVVGIARLSNNYLIERTAAVYVEFFRNIPLLLQIFFWYFAALRALPLPQDAEPM-FGVFF 119 Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230 L +G P + N IF++S + ++ +F +R EK G P+L IS L+ Sbjct: 120 LTIKGFFVPAFVWN-NLDIFIYSVIAALISIIFIRIYARKKQEKDGVQTPVLSISIGLLL 178 Query: 231 GLPTLVLIALKYQLHFDKPVLGQ-----FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285 LP L + + PV+ Q F + GG + PE +SL +ALS YTA FIAE V Sbjct: 179 ILPILSFLFGGVDTSIEVPVIKQLSQSGFTYEGGIKLPPELISLALALSLYTATFIAECV 238 Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345 R+G+ V +GQ EAA ++GLT + +LV++PQA+R IIPP T+QYLNL KNSSLA A+ Sbjct: 239 RAGVQGVSKGQKEAAASIGLTPNQVLKLVVMPQALRIIIPPTTNQYLNLTKNSSLAAAIA 298 Query: 346 FADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 + DLV V GT + QTG+AIEI+ I M YLSLSI I++FMN N KIA+KEK Sbjct: 299 YPDLVLVFAGTALMQTGRAIEIVSITMLTYLSLSISISIFMNWYNKKIAIKEK 351 >gi|254463434|ref|ZP_05076850.1| glutamate/glutamine/aspartate/asparagine transport system permease protein [Rhodobacterales bacterium HTCC2083] gi|206680023|gb|EDZ44510.1| glutamate/glutamine/aspartate/asparagine transport system permease protein [Rhodobacteraceae bacterium HTCC2083] Length = 394 Score = 238 bits (607), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 156/392 (39%), Positives = 231/392 (58%), Gaps = 17/392 (4%) Query: 21 DMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYT 80 D R + + Q I + L V F + +N+ N++ + L++ FL E AG++I+Q ++ YT Sbjct: 5 DTRYRSYTFQFIALIALIVAFGYLGSNLIANLKAAGLNISYRFLGEPAGYDINQRLIEYT 64 Query: 81 SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140 S SS+ A +VG +NT +A ATIIG +VG RLS N +V + VYVE+FRN+P Sbjct: 65 SQSSHMRAAVVGMLNTLLVAVVACFLATIIGVIVGVLRLSNNWIVNKLMGVYVEIFRNVP 124 Query: 141 PLVVIFFLYKSVLSVLPIP------DHSIVLPFGMF-LNNRGLSFP--TLTMDTNAKIFV 191 L+ I + ++VLP P D + + +F RG FP T T A Sbjct: 125 VLIWILIIMAVFVAVLPQPREFRGDDATASMFLDLFAFTGRGFYFPRPTFTAGWAAGSTG 184 Query: 192 FSFVLGIVLSLF--ATRLSRHF---HEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246 + ++G++++ F A L++ E+TG+ P + T I+ +P LV + L + Sbjct: 185 YLVIIGLLIASFFGARALAKSATVTQERTGER-PKTWYFTLAIWLVPVLVACVVM-GLTW 242 Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306 + P L FNF GG +++L ALS YTAAFIAE VR+G++A+ GQ EAA +LGL Sbjct: 243 ELPALKGFNFKGGIYARNSYIALTFALSIYTAAFIAENVRAGILAISTGQTEAAASLGLR 302 Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV-SVGGTIINQTGQAIE 365 + LV+LPQA+R IIPPL SQYLN+ KNSSLA+AVG+ D+ ++GG +NQTG+AIE Sbjct: 303 PGRIMNLVILPQALRVIIPPLISQYLNITKNSSLAIAVGYMDVTGTLGGITLNQTGRAIE 362 Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 +L+ M YL +S+ I+ MN N + LKE+ Sbjct: 363 TVLLLMAFYLIISLSISAIMNVYNNSVKLKER 394 >gi|309791171|ref|ZP_07685703.1| polar amino acid ABC transporter, inner membrane subunit [Oscillochloris trichoides DG6] gi|308226733|gb|EFO80429.1| polar amino acid ABC transporter, inner membrane subunit [Oscillochloris trichoides DG6] Length = 398 Score = 236 bits (603), Expect = 4e-60, Method: Compositional matrix adjust. Identities = 158/393 (40%), Positives = 235/393 (59%), Gaps = 14/393 (3%) Query: 14 SRMKFLYDMRVHNISVQIILALLLTVIFLWCV-NNVYNNMEKSNLSLGIGFLSERAGFEI 72 +R+ F D R+ + +QII L + V F+W + +N+ + +SNL FLS+ AGF I Sbjct: 11 ARIPFYRDTRIIAVLLQIIF-LFVVVGFIWFLYSNMMAGLRRSNLLPNYSFLSQPAGFPI 69 Query: 73 DQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVY 132 + +PY +Y A ++G +NT ++ G++ ATI+G ++G RLS+N L+ + Y Sbjct: 70 SESPIPYDPGRTYGYAFIIGVLNTLRVSVIGVVLATILGVIIGISRLSSNWLLRSVATGY 129 Query: 133 VEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLT-MDTNAKIFV 191 VE+ RNIP L+ +FF + + P SI L ++L+NRG+ TLT M + Sbjct: 130 VELVRNIPLLLQLFF-WMIMSQAFPRIQDSINLGGLLYLHNRGV---TLTWMREGSSFGA 185 Query: 192 FSFVLGI-----VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVL--IALKYQL 244 + +GI V+ A R+ ++ G ALP + + + ++L + + L Sbjct: 186 WLIWIGIGGLAGVILYIARRIQFVRRDRPGVALPWALLLAAGVALVGFIILRISSGTWPL 245 Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304 D P L +F+F GG T++ F +L + L YTA +I EIVRSG+ AV +GQ EAA ALG Sbjct: 246 ALDIPELQRFSFQGGITITTNFAALIMGLVIYTAVYIGEIVRSGIQAVNKGQREAARALG 305 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364 LT + RLV+ PQA+R +IPP+TSQYLNL KNSSLAVA+GF DL SV GT +NQTGQ + Sbjct: 306 LTPGQTLRLVIFPQALRIMIPPMTSQYLNLTKNSSLAVAIGFPDLFSVAGTTLNQTGQTV 365 Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 ++LI M YLS+S++ +L MN N +I L E+ Sbjct: 366 PVMLIVMLSYLSVSLVTSLLMNWYNKRIQLVER 398 >gi|86608411|ref|YP_477173.1| polar amino acid ABC transporter permease [Synechococcus sp. JA-2-3B'a(2-13)] gi|86556953|gb|ABD01910.1| polar amino amino acid ABC transporter (PAAT) family, permease protein [Synechococcus sp. JA-2-3B'a(2-13)] Length = 390 Score = 236 bits (603), Expect = 4e-60, Method: Compositional matrix adjust. Identities = 140/358 (39%), Positives = 213/358 (59%), Gaps = 15/358 (4%) Query: 46 NNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMI 105 N+ +M + +SLG FL A F I +G++PY SY A+ VG VNT WL+ ++ Sbjct: 42 QNLLASMRRLGISLGFRFLGNSANFGITEGLIPYDPSESYLKALAVGAVNTLWLSAVSIV 101 Query: 106 PATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVL 165 AT +G ++G RLS+N L + V E+FRN+P L+++ F Y+ V+ LP +S+ + Sbjct: 102 LATAMGFVLGMARLSSNWLARQLATVITEIFRNVPVLLIVIFWYQGVILTLPGVRNSLSI 161 Query: 166 PFGMFLNNRGLSFPTLTMD---TNAKIFVFSFVLGIVLSLFATRL---SRHFHEKTGKAL 219 +F+N RG+ P L A V + GI L A R SR + + Sbjct: 162 GGLVFINQRGVKLPGLDPSGWLVPALAIVIAAGWGIRKLLLARRPELGSRQRNLWVAAGV 221 Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279 LL ++ +++F P + D PVL +FNF GG +S EF ++ + L YT Sbjct: 222 ALLAVACWVLFPEPPV---------RLDVPVLERFNFRGGIQLSAEFTAMMLGLVTYTGC 272 Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339 +IAE+VR +AVPRGQ EAA A+GL+ + RLV++PQA+R +IP L +QYL L+KNSS Sbjct: 273 YIAEVVRGSFLAVPRGQWEAARAVGLSELQTFRLVIVPQALRIMIPSLNTQYLTLIKNSS 332 Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 LA+AVGF+DL ++ TIINQ+G+++E+ I M YL+ +++++ MN LNA++ L E+ Sbjct: 333 LAIAVGFSDLFNISSTIINQSGRSVEMFAILMATYLTFNLVVSYGMNWLNARVKLVER 390 >gi|99080136|ref|YP_612290.1| amino acid ABC transporter permease [Ruegeria sp. TM1040] gi|99036416|gb|ABF63028.1| Amino acid ABC transporter permease protein 3-TM region His/Glu/Gln/Arg/opine [Ruegeria sp. TM1040] Length = 422 Score = 236 bits (602), Expect = 5e-60, Method: Compositional matrix adjust. Identities = 148/410 (36%), Positives = 234/410 (57%), Gaps = 34/410 (8%) Query: 18 FLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIV 77 +YD R + ++Q++ + ++ ++N N+ FLSE AG++I+Q ++ Sbjct: 17 LIYDTRYRSATIQVVALIGFLILVGSIISNTAQNLADLGKEPSFRFLSEPAGYDINQRLL 76 Query: 78 PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137 Y + S+ A L+G +NT +A G I ATI+G ++G RLS+N LVA + VYVE+FR Sbjct: 77 DYDNQDSHMRASLMGLLNTLVVAVLGCITATILGVIIGVLRLSSNWLVARLMAVYVEMFR 136 Query: 138 NIPPLVVIFFLYKSVLSVLPIP---------------------DHSIVLPFGMFLNNRG- 175 N+P L+ I F+ ++ LP P + + +P +F N+ G Sbjct: 137 NVPLLLWIVFIMAILIETLPAPRAFRGENPEATMSVFDSVAVTNRGVYVPEPLFHNSLGN 196 Query: 176 ---LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKAL---PLLYISTFLI 229 + D + + VLG SL+ ++ R + ++T ++ P + + Sbjct: 197 IGVFGDSAVRFDVSLDLIALLVVLGA--SLYVSKRIRLWADQTQESTGLRPTTWHMRSAV 254 Query: 230 FGLPT-LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288 LP+ L+L L + H P L FNF GG+ + ++L++ALS YTAAFIAEIVRSG Sbjct: 255 VVLPSALLLFVLGF--HLGYPALKGFNFAGGTHLRNSLIALWLALSLYTAAFIAEIVRSG 312 Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348 ++A+ +GQ EAA ALGL ++ LV+LPQA+R IIPPL S YLNL KNSSLA+AVG+ D Sbjct: 313 ILAISKGQTEAAAALGLRPKRIMNLVILPQALRVIIPPLISNYLNLTKNSSLAIAVGYMD 372 Query: 349 LV-SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 L ++ G +NQTG+ +E +L+ M +YL++S++I+ MN N ++ L E+ Sbjct: 373 LTGTLMGITMNQTGRELETVLLGMLVYLTISLLISSVMNWYNNRVKLVER 422 >gi|83950492|ref|ZP_00959225.1| glutamate/glutamine/aspartate/asparagine ABC transporter, permease protein [Roseovarius nubinhibens ISM] gi|83838391|gb|EAP77687.1| glutamate/glutamine/aspartate/asparagine ABC transporter, permease protein [Roseovarius nubinhibens ISM] Length = 407 Score = 234 bits (598), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 156/411 (37%), Positives = 227/411 (55%), Gaps = 36/411 (8%) Query: 18 FLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIV 77 +YD R + ++Q + L + W ++N N++ + GFL E A ++I+Q ++ Sbjct: 2 LIYDTRYRSFTIQAVALLGFMLFGAWLISNTITNLQTLGKPVQFGFLLEPAQYDINQRLL 61 Query: 78 PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137 Y + ++ A +G NT +AF G I ATI+G VG RLS N LVA I VYVEVFR Sbjct: 62 DYNNRDTHLRAAFIGLTNTLLVAFLGCIAATILGVFVGVLRLSKNWLVAKIMAVYVEVFR 121 Query: 138 NIPPLVVIFFLYKSVLSVLPIPDH--------SIVLPFGMFLNNRGLSFPT--------- 180 N+P L+ I ++ LP P S+ + + NRG+ P Sbjct: 122 NVPVLLWIVLAMAVLIESLPSPKDFRGDNATASMSFFDSVAVTNRGVYIPEPLFSRSLGD 181 Query: 181 --------LTMDTNAKIFVFSFVLGIVLSLFATR----LSRHFHEKTGKALPLLYISTFL 228 L MD + + + VL I+ S+FA + + TG P + Sbjct: 182 VHLLGDSPLRMDLSLDLL--AIVLVIIASIFAIKKVNARATAIQNSTGLR-PTTWHVNLG 238 Query: 229 IFGLPTLVL-IALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287 IF +P +VL IAL + H P L FNF GG+ + +L++ALS YTAAFIAEIVR+ Sbjct: 239 IFFVPLIVLLIALGF--HLGYPELKGFNFQGGTHLRNSLTALWLALSLYTAAFIAEIVRA 296 Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347 G++A+ GQ EAA ALGL ++ LV+LPQA+R IIPPL S YLNL KNSSLA+AVG+ Sbjct: 297 GILAISHGQTEAAGALGLRPKRIMSLVVLPQALRVIIPPLISNYLNLTKNSSLAIAVGYM 356 Query: 348 DLV-SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 D+ ++GG +NQTG+ +E +L+ M YL +S+ I+ MN N+++ L E+ Sbjct: 357 DITGTLGGITMNQTGRELESVLMLMLAYLIISLSISAVMNWYNSRVKLVER 407 >gi|114766875|ref|ZP_01445797.1| glutamate/glutamine/aspartate/asparagine ABC transporter, permease protein [Pelagibaca bermudensis HTCC2601] gi|114540921|gb|EAU43981.1| glutamate/glutamine/aspartate/asparagine ABC transporter, permease protein [Roseovarius sp. HTCC2601] Length = 410 Score = 234 bits (596), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 153/401 (38%), Positives = 235/401 (58%), Gaps = 18/401 (4%) Query: 13 FSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEI 72 F + +YD R ++++Q++ ++L ++F W V+N +N++ GFL++ +G++I Sbjct: 12 FRLSQLIYDTRYRSLTIQVVAMIVLMLLFSWLVSNTIHNLQTLGKDFDFGFLTQPSGYDI 71 Query: 73 DQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVY 132 +Q ++ Y S S++ A +VG +NT +A G AT++G + G RLS N LV+ + VY Sbjct: 72 NQRLIEYDSQSTHGRAAIVGILNTLLVAVLGCALATVLGVIAGVLRLSNNWLVSRLMAVY 131 Query: 133 VEVFRNIPPLVVIFFLYKSVLSVLP--------IPDHSIVLPFGMFLNNRGLSFPTLTMD 184 VE FRN+P L+ I ++ + P PD S++ + + NRG+ P + Sbjct: 132 VEGFRNVPLLLWIVLIFALMTESTPAPRAFRGDTPDASMLFD-AVAITNRGVYVPAIHFA 190 Query: 185 ----TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG---LPTLVL 237 TN + ++ + S+FA + RH+ +A + +LI G LPT +L Sbjct: 191 SPFFTNGALNWLVVLVVLGASIFAIQRLRHWATAKQEATGDRPTTWYLILGILILPTGLL 250 Query: 238 IALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQM 297 + L D P L FNF GG + ++L++ALS YT AFIAEIVR G++AV +GQ Sbjct: 251 MLLMGAF-LDMPSLQGFNFGGGIHLRNSLIALWLALSLYTGAFIAEIVRGGILAVNKGQT 309 Query: 298 EAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS-VGGTI 356 EAA ALG+ LV+LPQA+R IIPPL SQ+LNL KNSSLA+AVG+ D+ S +GG Sbjct: 310 EAAYALGIRPSTTMNLVILPQALRVIIPPLISQFLNLTKNSSLAIAVGYMDVRSTLGGIT 369 Query: 357 INQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 INQTG+ +E +L+ YL LS++I+ MN NA + LKE+ Sbjct: 370 INQTGRELEGMLLLGLFYLVLSLLISGVMNVYNASVKLKER 410 >gi|171058820|ref|YP_001791169.1| polar amino acid ABC transporter inner membrane subunit [Leptothrix cholodnii SP-6] gi|170776265|gb|ACB34404.1| polar amino acid ABC transporter, inner membrane subunit [Leptothrix cholodnii SP-6] Length = 343 Score = 234 bits (596), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 140/368 (38%), Positives = 205/368 (55%), Gaps = 55/368 (14%) Query: 30 QIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAI 89 Q+++ L+ V+ W V+N NM + G FL++ AGF+I + ++ + S Y A Sbjct: 31 QLLMLALVAVVVGWLVHNTLANMALRGIRSGWDFLTQTAGFDIGESLIAFESIDPYWRAF 90 Query: 90 LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 LVG +NT +A G++ T++GT +G GR S N LV +C YVE+FRN+P LV + Y Sbjct: 91 LVGLLNTLRVALIGIVLITLLGTALGVGRYSRNALVRGLCYGYVELFRNVPILVQLLIWY 150 Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209 +L V +P+ L +G R Sbjct: 151 --LLMVEFLPEAMAPLDWG---------------------------------------GR 169 Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269 F K+G +LP L S + + P G F GG T+SPEF+S+ Sbjct: 170 VFLSKSGLSLPWLAHSA--------------EAGWSWSIPEPGAFVLEGGVTLSPEFLSV 215 Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329 + L+ YT++F+AE+VR+G+ +VPRGQ EAA ++GL+ K RLV+LPQA+R IIPPLT+ Sbjct: 216 LLGLTFYTSSFVAEVVRAGIASVPRGQTEAAHSIGLSRAKTLRLVVLPQALRVIIPPLTN 275 Query: 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 QYLNL KNSSLAV +G+ D+VS+ T +NQTG+A+E I I M +YLS S+ A MN N Sbjct: 276 QYLNLTKNSSLAVVIGYPDVVSIANTALNQTGRAVECIAIIMAVYLSTSLGTAALMNAYN 335 Query: 390 AKIALKEK 397 ++A++E+ Sbjct: 336 RRVAIRER 343 >gi|126737043|ref|ZP_01752778.1| binding-protein-dependent transport systems inner membrane component [Roseobacter sp. SK209-2-6] gi|126721628|gb|EBA18331.1| binding-protein-dependent transport systems inner membrane component [Roseobacter sp. SK209-2-6] Length = 395 Score = 234 bits (596), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 159/394 (40%), Positives = 234/394 (59%), Gaps = 20/394 (5%) Query: 21 DMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYT 80 D R +++ Q I AL+L + + NN+ N+ + L++ FL + +G++I+Q +V Y Sbjct: 5 DTRYRSLTFQAIAALVLALAIWYLGNNLIQNLRAAGLNISYSFLGDPSGYDINQRLVEYD 64 Query: 81 SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140 S SS+A A +VG +NT +AF I ATI G + G RLS N L++ I VYVEVFRNIP Sbjct: 65 SQSSHARAAIVGILNTVLVAFLACITATIFGVIAGVLRLSNNWLISKIMAVYVEVFRNIP 124 Query: 141 PLVVIFFLYKSVLSVLPIPDH--------SIVLPFGMFLNNRGLSFPTLTMDTN---AKI 189 L+ I ++ + +V+P P S+VL F NRG+ P +T + Sbjct: 125 VLIWIIIIFTIMTAVMPGPREFRGAEPTASMVLDLFAF-TNRGVYIPMPWFETGLFASAG 183 Query: 190 FVFSFVLGIVL-SLFATRL----SRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244 + VL ++ S F R + E+TG L+I ++ LP +VL+ L Sbjct: 184 MNWVLVLAVLAGSFFVMRKVEQNATKKQEETGIRPNTLFIG-LAVWILP-IVLLLFVMGL 241 Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304 ++ P L FNF GG + ++L+ ALS YT AFIAE VR+G+ A+ +GQ EAA ALG Sbjct: 242 TWEVPELKGFNFKGGIKIGGPLIALWFALSIYTGAFIAENVRAGIQAISKGQTEAAAALG 301 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV-SVGGTIINQTGQA 363 L + LV+LPQA+R IIPPL S +LN+ KNSSLA+AVG+AD+ ++GG +NQTG+A Sbjct: 302 LRPGRIMNLVVLPQALRVIIPPLISNFLNITKNSSLAIAVGYADITATLGGITLNQTGRA 361 Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 IE +L+ M YL+ S++I++ MN NA + LKE+ Sbjct: 362 IECVLLLMLFYLTASLLISMAMNVYNASVKLKER 395 >gi|83592119|ref|YP_425871.1| binding-protein dependent transport system inner membrane protein [Rhodospirillum rubrum ATCC 11170] gi|83575033|gb|ABC21584.1| Binding-protein-dependent transport systems inner membrane component [Rhodospirillum rubrum ATCC 11170] Length = 387 Score = 233 bits (595), Expect = 3e-59, Method: Compositional matrix adjust. Identities = 157/374 (41%), Positives = 221/374 (59%), Gaps = 20/374 (5%) Query: 33 LALLLTVIFLWCV--NNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAIL 90 LA+LL V L+ V N +N+ + +++G G+L A FEI + +V YTS SYA A+ Sbjct: 24 LAVLLGVFALFSVLGANTVDNLGRLGITVGFGYLDHPANFEIGESLVAYTSGDSYARALG 83 Query: 91 VGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYK 150 VG +NT ++ G + AT++G +G GRLSAN L++ ++YVEV RN P L+ +FF + Sbjct: 84 VGILNTALVSIIGCLLATLLGVALGIGRLSANLLISRAVQLYVEVIRNTPLLLQLFF-WS 142 Query: 151 SVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLG-------IVLSLF 203 + + LP P + G+FL NRGL P L MD A VFS +L +V L Sbjct: 143 ATIHALPGPRQAFEPLTGVFLTNRGLYMPALAMDGAA---VFSLLLLGGGALAGVVRILV 199 Query: 204 ATRLSRHF-HEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV 262 R RH E+ K L ++ L+ L + A+ + P LG FN GG + Sbjct: 200 HER--RHGPMERAAKTALLGAVAVLLLGVLALCLGGAVS----VEPPRLGGFNITGGWVL 253 Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322 SPEF++L + L +A I EIVRSG+ AVP GQ EAA +LGLT + RLV+LPQA+R Sbjct: 254 SPEFLALLVGLVINASAVICEIVRSGIEAVPEGQWEAARSLGLTRGRTLRLVVLPQALRV 313 Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382 +IP +TS YL+L KNSSLAVA+GF DLVSV T NQTG E I + M +YL++S+ ++ Sbjct: 314 VIPLMTSSYLSLTKNSSLAVAIGFPDLVSVVNTSANQTGHVFEAIALMMAVYLTISLTVS 373 Query: 383 LFMNRLNAKIALKE 396 +N N +++L Sbjct: 374 AALNFYNHRLSLGR 387 >gi|172037185|ref|YP_001803686.1| amino acid ABC transporter permease, His/Glu/Gln/Arg/opine [Cyanothece sp. ATCC 51142] gi|171698639|gb|ACB51620.1| amino acid ABC transporter permease protein, His/Glu/Gln/Arg/opine [Cyanothece sp. ATCC 51142] Length = 395 Score = 233 bits (595), Expect = 3e-59, Method: Compositional matrix adjust. Identities = 151/390 (38%), Positives = 227/390 (58%), Gaps = 12/390 (3%) Query: 15 RMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSE---RAGFE 71 ++ F D R+ + +Q++ ++ ++F+ NN+ N + L+ G GF+ + + F Sbjct: 11 KIPFWRDSRIIKVIIQLLTISIIILVFILLGNNLSQNFRQLGLTFGFGFIFDPDLNSRFN 70 Query: 72 IDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRV 131 I +PY Y AILVG +N+ + +G+I A ++G ++G GRLS N LV I + Sbjct: 71 IGDSPIPYQPTDPYYRAILVGLLNSLRVMITGIILAFLLGVIIGLGRLSDNWLVQKIATI 130 Query: 132 YVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV 191 YVE RN P L+ +FF Y +V P D +VL +FL+N+G+ P L + + + Sbjct: 131 YVETIRNTPLLLQLFFWYFAVFLKFPKIDAPLVLFNSIFLSNQGVYLPFLLRNLQTFLAI 190 Query: 192 FSFVLGIVLSLFATRLSRHF---HEKTGKALPLLYISTFLIFGLPTLVLIALKYQL-HFD 247 +LG + + R TGK + I+ ++ L +V L +Q ++D Sbjct: 191 LILLLGGITAFLIWRKKTKVIIQQGTTGKVYNIGLITILILSFL--IVFFGLDWQFPNYD 248 Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307 V N G +SPEF +L L+ YTAAFIAE+VRSG+ +V +GQ EAA ALGL Sbjct: 249 SQVQRIQN---GLNLSPEFATLLTGLTIYTAAFIAEVVRSGIQSVSKGQWEAAKALGLNS 305 Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367 A RLV+ PQA+R +IPPLTS++LNL KNSSLAVA+G+ D+ +V TI NQTG++IE++ Sbjct: 306 GLAMRLVIFPQALRVMIPPLTSEFLNLAKNSSLAVAIGYNDIYAVSNTISNQTGKSIEML 365 Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 LI M YL +++I+ MNRLN + LKEK Sbjct: 366 LIVMVTYLIFNLIISSGMNRLNRFVQLKEK 395 >gi|126736639|ref|ZP_01752379.1| glutamate/glutamine/aspartate/asparagine transport system permease protein [Roseobacter sp. CCS2] gi|126713952|gb|EBA10823.1| glutamate/glutamine/aspartate/asparagine transport system permease protein [Roseobacter sp. CCS2] Length = 405 Score = 233 bits (593), Expect = 6e-59, Method: Compositional matrix adjust. Identities = 148/389 (38%), Positives = 222/389 (57%), Gaps = 11/389 (2%) Query: 19 LYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVP 78 L D R + + Q I +LL + N+ N+ L++ FL + AG++I+Q + Sbjct: 18 LNDTRYRSYTFQFIALVLLIAFMAYLGINLVRNLAAQGLNISFSFLGDPAGYDINQRPIE 77 Query: 79 YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138 Y S S++ A +VG +NT +AF + ATI G G RLS+N +V + YVE+FRN Sbjct: 78 YDSQSTHLRAAVVGILNTLIVAFLACVTATIFGVTAGVLRLSSNWVVRKLMSFYVEIFRN 137 Query: 139 IPPLVVIFFLYKSVLSVLPIP------DHSIVLPFGMF-LNNRGLSFPTLTMDTNAKIFV 191 IP L+ I ++ + +P P + + + F F NRG+ P +D A V Sbjct: 138 IPVLIWIIIIFSIMTVAMPAPRAFRGDNATSSMLFESFAFTNRGVYSPAPVIDGAAGWIV 197 Query: 192 FSFVLGIVLSLFATR--LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249 + ++ +FA R ++ ++ TG+ LP + S + F LV L + D P Sbjct: 198 VGVFIASIIGIFAYRKFATKKLYD-TGQLLPTFWPSVAMFFVPTILVYFILGRPITLDYP 256 Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309 L FNF GG + ++L+ AL+ YT AFIAE VR+G+ A+ +GQ EAA +LGL + Sbjct: 257 SLQGFNFQGGLHLRGSLIALWFALAIYTGAFIAENVRAGIQAISKGQTEAAASLGLRPGR 316 Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS-VGGTIINQTGQAIEIIL 368 LV+LPQA+R IIPPL SQYLN+ KNSSLA+AVG+ D+ S +GG +NQTG+AIE IL Sbjct: 317 IMNLVVLPQALRVIIPPLISQYLNITKNSSLAIAVGYMDVTSTLGGITLNQTGRAIEAIL 376 Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKEK 397 + M YL++S++I+ MN N + L+E+ Sbjct: 377 LLMLFYLTISLLISGVMNVYNNSVKLQER 405 >gi|260427206|ref|ZP_05781185.1| glutamate/glutamine/aspartate/asparagine transport system permeaseprotein BztB [Citreicella sp. SE45] gi|260421698|gb|EEX14949.1| glutamate/glutamine/aspartate/asparagine transport system permeaseprotein BztB [Citreicella sp. SE45] Length = 410 Score = 232 bits (591), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 155/403 (38%), Positives = 235/403 (58%), Gaps = 22/403 (5%) Query: 13 FSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEI 72 F + +YD R ++++Q++ +LL ++F W V+N +N++ GFL + +G++I Sbjct: 12 FRLSQLIYDTRYRSLTIQVVAMILLMLLFSWLVSNTIHNLQNLGKDFDFGFLWQPSGYDI 71 Query: 73 DQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVY 132 +Q ++ Y S S++ A LVG +NT +A G AT++G + G RLS N LVA + Y Sbjct: 72 NQRLIDYNSQSTHGRAALVGILNTLLVAALGCALATVLGVIAGVLRLSNNWLVARLMAFY 131 Query: 133 VEVFRNIPPLVVIFFLYKSVLSVLPIPD-------HSIVLPFGMFLNNRGLSFPTLTMDT 185 VE FRN+P L+ I ++ + P P + +L + + NRG+ P + Sbjct: 132 VEGFRNVPLLLWIVLIFALMTEGTPAPSAFRGDTPSASMLFDAVAITNRGVYIPAIHF-- 189 Query: 186 NAKIF---VFSFVLGIVL---SLFATRLSRHF----HEKTGKALPLLYISTFLIFGLPTL 235 NA F +++++L I + S+F + H+ E TG P + T + +PT Sbjct: 190 NAAFFESGLYNWLLIIAVFAASVFVVKRIGHWAAVKQEATGDR-PTTWYLTLGVLIVPTA 248 Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295 +L+ L +FD P L FNF GG + ++L++ALS YT AFIAEIVR G++A+ +G Sbjct: 249 ILMVLM-GAYFDLPSLQGFNFGGGVHLRGSLIALWLALSLYTGAFIAEIVRGGILAISKG 307 Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS-VGG 354 Q EAA ALGL LV+LPQA+R IIPPL SQ+LNL KNSSLA+AVG+ D S +GG Sbjct: 308 QSEAAFALGLRPGTTMNLVILPQALRVIIPPLISQFLNLTKNSSLAIAVGYMDARSTLGG 367 Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 INQTG+ +E +L+ YL LS++I+ MN N + LKE+ Sbjct: 368 ITINQTGRELEGMLLLGLFYLVLSLLISGVMNVYNNSVKLKER 410 >gi|218437711|ref|YP_002376040.1| polar amino acid ABC transporter inner membrane protein [Cyanothece sp. PCC 7424] gi|218170439|gb|ACK69172.1| polar amino acid ABC transporter, inner membrane subunit [Cyanothece sp. PCC 7424] Length = 390 Score = 231 bits (590), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 148/393 (37%), Positives = 228/393 (58%), Gaps = 16/393 (4%) Query: 14 SRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSER---AGF 70 ++ F D R+ N+ QI + L+L I ++ NN+ N ++ L+ G F+ + AGF Sbjct: 5 EKIPFWRDTRILNLLGQIFVILVLVGILIFLGNNLIINFQRLRLNFGFEFIFDTRRPAGF 64 Query: 71 EIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICR 130 I +PY A+LVG +N+ + SG+I A I+G +VG GRLS+N LV I Sbjct: 65 NIGNSPIPYQPTDPVIIALLVGLINSLRVMISGIILAAILGIMVGLGRLSSNWLVRQIAT 124 Query: 131 VYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIF 190 VYVE+FRN P L+ +FF Y +V P D+ ++L + L+NRG++ P + + Sbjct: 125 VYVEIFRNTPLLLQLFFWYSAVFLKFPKIDNPLILFNSILLSNRGMAIPWPSGKLQTWLS 184 Query: 191 VFSFVLGIVLS--LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248 + + +L+ ++ TR R + L+ +S G+ L+AL L + K Sbjct: 185 LILLFINAILAFLVWRTRTQRRIQQGESGNRFLVILS-----GIGITSLLALMIGLDWQK 239 Query: 249 PVL----GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304 P+L G+ G +SPEF SL I L+ YTAAFIAE+VR+G+ +V +GQ EAA ALG Sbjct: 240 PLLNIELGRIE--QGLILSPEFASLLIGLTVYTAAFIAEVVRAGIQSVNQGQWEAAKALG 297 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364 L +LV+ PQA+R +IPPLTS++LNL KNSSLA A + D+ +V T+ +TG+A+ Sbjct: 298 LKPSLVMQLVIFPQALRVMIPPLTSEFLNLAKNSSLASATLYKDIFAVSYTVAEKTGRAV 357 Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 E++L+ M YL ++++I+ MN N + LKE+ Sbjct: 358 EMMLVVMSTYLIINLIISSGMNTFNHLVQLKER 390 >gi|110347224|ref|YP_666042.1| polar amino acid ABC transporter, inner membrane subunit [Mesorhizobium sp. BNC1] gi|110283335|gb|ABG61395.1| amino acid ABC transporter membrane protein 1, PAAT family [Chelativorans sp. BNC1] Length = 380 Score = 231 bits (590), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 130/349 (37%), Positives = 212/349 (60%), Gaps = 2/349 (0%) Query: 50 NNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATI 109 N+E + LG GFL A F+I + I+PY+S A +VG N+ +++ ++ A++ Sbjct: 33 RNLELRGIPLGFGFLWRPANFQIAETILPYSSSDPNWWAAVVGLSNSLFISVLVILLASV 92 Query: 110 IGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGM 169 IG +G GRLS+N LV+ +CRV+VEV RN P +V++ F Y V+P+ + L G Sbjct: 93 IGLFIGIGRLSSNPLVSGLCRVWVEVARNTPLVVLLIFNYALWWEVVPLATQAWKLAPGT 152 Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229 ++ RGLS P LT + + + A+ +R +TG+ P + +L Sbjct: 153 HISVRGLSMPALTWSASVLAPAAFLATSAAILVVASYAARQRQVETGRR-PAYVSAAWLF 211 Query: 230 FGL-PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288 L ++ L+A + + D P + NF GG +++PE ++ I L+ YTA FI EIVR G Sbjct: 212 TALGASIFLLAYRDAVSLDIPEFRRANFSGGWSLTPELTTILIGLTFYTAGFIGEIVRGG 271 Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348 ++AV +GQ EAA ALGL+ + RLV++P A+RSI+PPL SQY+N++KNS+LA+ VG+ D Sbjct: 272 ILAVRKGQWEAATALGLSRGQTYRLVVVPLALRSIVPPLNSQYINVVKNSTLAIVVGYQD 331 Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 ++V T+IN+T AIE + I + ++L++++ ++ +N N +IA+ E+ Sbjct: 332 FMTVVSTMINKTSHAIEGVAIILGVFLAVNLALSALLNAYNRRIAIMER 380 >gi|113475660|ref|YP_721721.1| polar amino acid ABC transporter inner membrane subunit [Trichodesmium erythraeum IMS101] gi|110166708|gb|ABG51248.1| polar amino acid ABC transporter, inner membrane subunit [Trichodesmium erythraeum IMS101] Length = 388 Score = 231 bits (588), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 139/386 (36%), Positives = 217/386 (56%), Gaps = 6/386 (1%) Query: 14 SRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEID 73 ++ D R +++Q++ ++ V+ ++N+ N+ + G FL A F I Sbjct: 7 QKIPLWRDDRFWRVALQVLAIIIFVVVVFIMISNLSRNLAQQGTRFGFSFLDNEAAFSIS 66 Query: 74 QGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYV 133 + ++PY + Y +L G N+ + G+ TI+G + G S N L+ + RVYV Sbjct: 67 ESLIPYEASDPYIQVLLAGLFNSLRVMILGIFLTTILGIVAGIASFSENWLLRNLNRVYV 126 Query: 134 EVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFS 193 EV RN P L+ +FF Y +V LP+P + LP +F++ RG++ P N +++ Sbjct: 127 EVVRNTPLLLQLFFWYFAVFFNLPLPQEKLELPGPIFMSKRGIAIPWPENTVNVWLWLIV 186 Query: 194 FVLGIVLSLFATRL-SRHFHEKTGKALP-LLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251 LG + ++F + ++ EK P L+ I T I L +++ AL +Q Sbjct: 187 LFLGAIAAIFIWQWRNKLMTEKAASGQPQLIAIITIGIMEL-LIIIFALGWQAPIATETG 245 Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311 G GG ++ E +L + L YT AFIAEIVRSG+ AVP+GQ EAA +LGL Sbjct: 246 GT---KGGLNLTLEISALLVGLVFYTGAFIAEIVRSGIQAVPKGQWEAAKSLGLKPGLVM 302 Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371 RLV+ PQA+R +IP L SQY+NL KNSSLA+A+G+ DL +V T NQTG+ IE+ ++ M Sbjct: 303 RLVIFPQALRVMIPSLNSQYMNLAKNSSLAIAIGYPDLYAVANTTYNQTGRPIEVFILIM 362 Query: 372 FIYLSLSIMIALFMNRLNAKIALKEK 397 +YLS++++I+L MN LN + LKE+ Sbjct: 363 VVYLSINLIISLSMNFLNKSVQLKER 388 >gi|307152420|ref|YP_003887804.1| polar amino acid ABC transporter inner membrane subunit [Cyanothece sp. PCC 7822] gi|306982648|gb|ADN14529.1| polar amino acid ABC transporter, inner membrane subunit [Cyanothece sp. PCC 7822] Length = 390 Score = 230 bits (586), Expect = 3e-58, Method: Compositional matrix adjust. Identities = 149/391 (38%), Positives = 231/391 (59%), Gaps = 12/391 (3%) Query: 14 SRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFL--SER-AGF 70 + F D R ++ Q ++ L++ I + NN+ NN ++ +L G F+ S R AGF Sbjct: 5 EKTPFWRDTRFLSLLGQTLVVLVVLAIGFFLANNLVNNFQRLHLRFGFDFIFDSRRPAGF 64 Query: 71 EIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICR 130 I +PY A+LVG +N+ + G+I A+I+G ++G RLS+N LV +I Sbjct: 65 SIGNAPIPYKPTDPIIVALLVGLINSLKVLVFGIILASILGVILGISRLSSNWLVRYIAT 124 Query: 131 VYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIF 190 VYVE+FRN P L+ +FF Y +V P ++ ++L G+FL+NRGL+ P + + + +F Sbjct: 125 VYVEIFRNTPLLLQLFFWYTAVFLKFPKINNPLILFEGIFLSNRGLAIPWPSGNFLSWLF 184 Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI--STFLIFGLPTLVLIALKYQLHFDK 248 +L +V S+ + GK + + S +I L L +I L +Q K Sbjct: 185 AGFLLLSVVSSVKLWHWHTQLRVQQGKTRSIFVVIFSAIIIASLWAL-MIGLDWQ----K 239 Query: 249 PVL-GQFNFIG-GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306 P L + I G T+SPEF S+ + L+ YTAAFIAE+VR+G+ +V +GQ EAA+ALGL Sbjct: 240 PQLNAKLGLIEHGLTLSPEFASILMGLTFYTAAFIAEVVRAGIQSVDKGQREAALALGLK 299 Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 +LV+ PQA+R IIPPLTS++LNL KNSSLA A + D+ +V T+ ++G+A+E+ Sbjct: 300 PSLVMQLVIFPQALRVIIPPLTSEFLNLAKNSSLASATLYKDIYAVSYTVAEKSGRAVEM 359 Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 IL+ M YL ++++I+ MN N + LKE+ Sbjct: 360 ILVVMGTYLIINLVISSSMNTFNRWVQLKER 390 >gi|89053119|ref|YP_508570.1| binding-protein-dependent transport systems inner membrane component [Jannaschia sp. CCS1] gi|88862668|gb|ABD53545.1| L-aspartate ABC transporter membrane protein / L-asparagine ABC transporter membrane protein / L-glutamine ABC transporter membrane protein / L-glutamate ABC transporter membrane protein [Jannaschia sp. CCS1] Length = 429 Score = 229 bits (585), Expect = 4e-58, Method: Compositional matrix adjust. Identities = 155/421 (36%), Positives = 233/421 (55%), Gaps = 39/421 (9%) Query: 13 FSRMKFLYDMRVHNISVQIILALLLTVIFLWCVN-NVYNNMEKSNLSLGIGFLSERAGFE 71 F + +YD R ++++Q++ A +L ++ LW + N N+ GFL RAG++ Sbjct: 12 FRLSQLIYDTRYRSMTIQVV-AFILIMLGLWYLGRNAIQNLSDLGKDFDFGFLGNRAGYD 70 Query: 72 IDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRV 131 I+Q ++ Y++DS++ A +VG +NT +AF G I ATI+G G RLS N +V + V Sbjct: 71 INQRLIEYSNDSTHGRAAIVGILNTLLVAFLGCITATILGVAAGVLRLSNNWIVGRLMTV 130 Query: 132 YVEVFRNIPPLVVIFFLYKSVLSVLPIP--------DHSIVLPFGMFLNNRGLSFP---- 179 YVE FRNIP L+ I ++ + +P P + S+ L + + NRG+ P Sbjct: 131 YVEGFRNIPLLLWIIVIFAIMTEAMPQPRDFRGDNPEASMSLGGSVAVTNRGVYIPNVVF 190 Query: 180 TLTMDTNA---------------------KIFVFSFVLGIVLSLFATRLSRHFHEKTGKA 218 T ++ N +F+ + G++ S R ++ E TG Sbjct: 191 TRSLGGNEMSDAADGVPAAIIPAASFGDWALFLAVLIAGVLGSGAIARWAKAKQEATGVR 250 Query: 219 LP-LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT 277 P L ++ I +VLIAL L D P L FNF GG + ++L+ ALS YT Sbjct: 251 PPGLFWMRAAAIVVPAAIVLIALGATL--DYPELRGFNFSGGIHLRNALIALWFALSLYT 308 Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 AFIAEIVR+G+++V +GQ EA+ ALG+ LV+LPQA+R IIPPL SQ+LNL KN Sbjct: 309 GAFIAEIVRAGILSVSKGQTEASSALGMRASWTMNLVVLPQALRVIIPPLISQFLNLTKN 368 Query: 338 SSLAVAVGFADLVS-VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 SSLA+AVG+ D+ S +GG INQTG+ +E +L+ YL S++I+ MN N + L+E Sbjct: 369 SSLALAVGYMDVRSTLGGITINQTGRELEGMLLLGAFYLITSLLISAVMNVYNNSVKLQE 428 Query: 397 K 397 + Sbjct: 429 R 429 >gi|328950981|ref|YP_004368316.1| polar amino acid ABC transporter, inner membrane subunit [Marinithermus hydrothermalis DSM 14884] gi|328451305|gb|AEB12206.1| polar amino acid ABC transporter, inner membrane subunit [Marinithermus hydrothermalis DSM 14884] Length = 392 Score = 229 bits (584), Expect = 5e-58, Method: Compositional matrix adjust. Identities = 153/395 (38%), Positives = 219/395 (55%), Gaps = 28/395 (7%) Query: 16 MKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQG 75 + F D RV N+ VQ++ AL + + + Y M + FL + AGF I +G Sbjct: 6 IPFWRDARVLNLVVQVLAALFALGLIAFLLFTAYRGMVARGIPFTFSFLGQEAGFTISEG 65 Query: 76 IV-----------PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKL 124 V P+ +Y A G NT +A G++ TI+G LVG GRLS+N L Sbjct: 66 PVLALEDGRLVLRPFKPSDAYWQAFFAGIYNTLRVALVGIVLTTILGVLVGIGRLSSNWL 125 Query: 125 VAWICRVYVEVFRNIPPLVVIFFLY-KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTM 183 V + YVE+ RN P LV +FF Y ++L P+ S G+ + RG+ P + Sbjct: 126 VNRLAFAYVELVRNTPLLVQMFFWYFGAILKFPPVRQASEWFG-GLIASQRGIFLP-WPV 183 Query: 184 DTNA----KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239 T+A + F++ +L V A R AL L + +L+ G P Sbjct: 184 PTDAWPRFEPFLWGGLLLAVGVYLALRRQGWARWSALGALVLAWGVGWLVSGGP------ 237 Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299 L +P LG+F GG T+SPEF ++ +AL YTA++IAEIVR + ++P+GQ EA Sbjct: 238 ----LAISEPELGRFRVTGGLTLSPEFSAVLLALVIYTASYIAEIVRGAIQSLPKGQWEA 293 Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359 A +LGLT+ + RLV+LPQAMR IIPPL +QYLNL KNSSLA+AVG+ +L +V GTI NQ Sbjct: 294 ATSLGLTYAQTMRLVILPQAMRIIIPPLGNQYLNLTKNSSLAIAVGYPELFNVYGTIANQ 353 Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394 +G+++E ILI M YLS+S+ I+ +N N ++ L Sbjct: 354 SGRSLEGILIVMAAYLSMSLTISALVNWYNRRVTL 388 >gi|163740275|ref|ZP_02147669.1| binding-protein-dependent transport systems inner membrane component [Phaeobacter gallaeciensis 2.10] gi|161386133|gb|EDQ10508.1| binding-protein-dependent transport systems inner membrane component [Phaeobacter gallaeciensis 2.10] Length = 395 Score = 229 bits (584), Expect = 6e-58, Method: Compositional matrix adjust. Identities = 151/395 (38%), Positives = 231/395 (58%), Gaps = 22/395 (5%) Query: 21 DMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYT 80 D R +++ Q I AL+L + + NN+ N+ + L++ GFL + +G++I+Q ++ Y Sbjct: 5 DTRYRSLTFQAIAALVLALAIWYLGNNLIQNLRAAGLNISYGFLGDPSGYDINQRLIEYD 64 Query: 81 SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140 S SS+A A +VG +NT +A I ATI G + G RLS N LV+ + VYVE+FRNIP Sbjct: 65 SQSSHARAAVVGVLNTLLVAVLACITATIFGVVAGVLRLSNNWLVSKLMAVYVEIFRNIP 124 Query: 141 PLVVIFFLYKSVLSVLPIP------DHSIVLPFGMF-LNNRGLSFPTLTMDT----NAKI 189 L+ I ++ + +V+P P + + + F +F NRG+ P ++ + + Sbjct: 125 VLIWIIIIFTIMTAVMPGPREFRGDNATSSMLFDLFAFTNRGVYIPMPWFESGFFASGAL 184 Query: 190 FVFSFVLGIVLSLFATRL----SRHFHEKTG--KALPLLYISTFLIFGLPTLVLIALKYQ 243 + +V S R + EKTG L+ + +L+ L L+ Sbjct: 185 NWLVVIAALVGSFLVMRRIEANATKTQEKTGVRPKTKLIALGVWLV----PLALVLFVMG 240 Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 L ++ P L FNF GG + ++L+ ALS YT AFIAE VR+G+ A+ +GQ EAA AL Sbjct: 241 LSWEVPELKGFNFKGGIKIGGPLIALWFALSIYTGAFIAENVRAGIQAINKGQTEAAAAL 300 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV-SVGGTIINQTGQ 362 GL + LV+LPQA+R IIPPL S +LN+ KNSSLA+AVG+AD+ ++GG +NQTG+ Sbjct: 301 GLRPGRIMNLVVLPQALRVIIPPLISNFLNITKNSSLAIAVGYADITATLGGITLNQTGR 360 Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 AIE +L+ M YL+ S++I++ MN NA + LKE+ Sbjct: 361 AIECVLLLMLFYLTASLLISMVMNVYNASVKLKER 395 >gi|163739482|ref|ZP_02146892.1| glutamate/glutamine/aspartate/asparagine transport system permease protein [Phaeobacter gallaeciensis BS107] gi|161387235|gb|EDQ11594.1| glutamate/glutamine/aspartate/asparagine transport system permease protein [Phaeobacter gallaeciensis BS107] Length = 410 Score = 229 bits (583), Expect = 7e-58, Method: Compositional matrix adjust. Identities = 151/395 (38%), Positives = 231/395 (58%), Gaps = 22/395 (5%) Query: 21 DMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYT 80 D R +++ Q I AL+L + + NN+ N+ + L++ GFL + +G++I+Q ++ Y Sbjct: 20 DTRYRSLTFQAIAALVLALAIWYLGNNLIQNLRAAGLNISYGFLGDPSGYDINQRLIEYD 79 Query: 81 SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140 S SS+A A +VG +NT +A I ATI G + G RLS N LV+ + VYVE+FRNIP Sbjct: 80 SQSSHARAAVVGVLNTLLVAVLACITATIFGVVAGVLRLSNNWLVSKLMAVYVEIFRNIP 139 Query: 141 PLVVIFFLYKSVLSVLPIP------DHSIVLPFGMF-LNNRGLSFPTLTMDT----NAKI 189 L+ I ++ + +V+P P + + + F +F NRG+ P ++ + + Sbjct: 140 VLIWIIIIFTIMTAVMPGPREFRGDNATSSMLFDLFAFTNRGVYIPMPWFESGFFASGAL 199 Query: 190 FVFSFVLGIVLSLFATRL----SRHFHEKTG--KALPLLYISTFLIFGLPTLVLIALKYQ 243 + +V S R + EKTG L+ + +L+ L L+ Sbjct: 200 NWLVVIAALVGSFLVMRRIEANATKTQEKTGVRPKTKLIALGVWLV----PLALVLFVMG 255 Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 L ++ P L FNF GG + ++L+ ALS YT AFIAE VR+G+ A+ +GQ EAA AL Sbjct: 256 LSWEVPELKGFNFKGGIKIGGPLIALWFALSIYTGAFIAENVRAGIQAINKGQTEAAAAL 315 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV-SVGGTIINQTGQ 362 GL + LV+LPQA+R IIPPL S +LN+ KNSSLA+AVG+AD+ ++GG +NQTG+ Sbjct: 316 GLRPGRIMNLVVLPQALRVIIPPLISNFLNITKNSSLAIAVGYADITATLGGITLNQTGR 375 Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 AIE +L+ M YL+ S++I++ MN NA + LKE+ Sbjct: 376 AIECVLLLMLFYLTASLLISMVMNVYNASVKLKER 410 >gi|260577145|ref|ZP_05845122.1| polar amino acid ABC transporter, inner membrane subunit [Rhodobacter sp. SW2] gi|259020619|gb|EEW23938.1| polar amino acid ABC transporter, inner membrane subunit [Rhodobacter sp. SW2] Length = 425 Score = 229 bits (583), Expect = 8e-58, Method: Compositional matrix adjust. Identities = 158/412 (38%), Positives = 237/412 (57%), Gaps = 35/412 (8%) Query: 18 FLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIV 77 +YD R I++Q+I+ +L+ + W V+N N+ + + GFL RAG++IDQ ++ Sbjct: 17 LIYDTRYRAITIQVIVLILVLLCVSWLVHNTMVNLAAKDKDINFGFLWNRAGYDIDQQLI 76 Query: 78 PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137 PYT+DSS+ A +VG +NT +A + AT+IG VG RLS N LV + VY+EVFR Sbjct: 77 PYTNDSSHGRAAVVGLLNTLVVAGLACVLATVIGVFVGILRLSKNWLVGRLMTVYIEVFR 136 Query: 138 NIPPLVVIFFLYKSVLSVLPIPDH----------------SIVLPFGMFLNNRG------ 175 N+P L+ IF + +P P +++ + L NRG Sbjct: 137 NVPVLLWIFVAATILSETMPEPKDFKVTDAMIAAGQAPKAAMLFDGAVALTNRGTNIPAP 196 Query: 176 -LSFPTLTMDTNAKIFVFSF------VLGIVL-SLFATRLSRHFHEKTGKALPLLYISTF 227 LS P ++D FSF ++G VL R +R E TG P + + Sbjct: 197 LLSRPLGSLDLGLITLNFSFLAMLAVIIGSVLVHRLLLRRARAVQEATG-VRPATWWKSL 255 Query: 228 LIFGLPTLVLI-ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286 ++ +P + L+ AL + H D PV FNF GG ++ F +L +ALS Y+A +IAE VR Sbjct: 256 IVLVVPFVALLFALGF--HLDYPVFKGFNFKGGINLAHSFTALLLALSLYSATYIAENVR 313 Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346 +G++AV GQ EAA ALGL + TRL++LPQA+R I+PPL SQYL++ KN+SL +AV + Sbjct: 314 AGVMAVSHGQTEAAFALGLRPSRTTRLIILPQALRVIVPPLISQYLSITKNTSLGIAVSY 373 Query: 347 ADLV-SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 DL ++GG +NQTG+ +E +L+ M IYL +S++I+ MN N+ + LKE+ Sbjct: 374 LDLRGTLGGITLNQTGRELECMLLMMLIYLIISLIISAVMNVYNSSVKLKER 425 >gi|114771236|ref|ZP_01448656.1| glutamate/glutamine/aspartate/asparagine ABC transporter, permease protein [alpha proteobacterium HTCC2255] gi|114548161|gb|EAU51048.1| glutamate/glutamine/aspartate/asparagine ABC transporter, permease protein [alpha proteobacterium HTCC2255] Length = 420 Score = 228 bits (581), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 149/411 (36%), Positives = 229/411 (55%), Gaps = 28/411 (6%) Query: 13 FSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEI 72 F + LYD R ++++QI+ + + + F W ++N N+ + FL E + ++I Sbjct: 12 FKFSQLLYDTRYRSMTIQIVSLIAILLFFGWLISNTAANLATLGKPIQFKFLGEPSNYDI 71 Query: 73 DQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVY 132 +Q ++ YTS ++ A L+G +NT LA G + ATI+G +G RLS N LVA + +Y Sbjct: 72 NQRLLDYTSRDTHLRAGLMGLINTLVLALMGCVTATILGVAIGVLRLSKNWLVARVMTLY 131 Query: 133 VEVFRNIPPLVVIFFLYKSVLSVLPIPDH------SIVLPFGMFLNNRGLSFPTLTMDTN 186 +E+FRNIP L+ I ++ ++ +P P+ ++ L + + NRG+ P + Sbjct: 132 IELFRNIPVLLWIIIVFSIMIETMPRPNQFRSGEAAMKLFDSVAITNRGVYIPEPLFNGG 191 Query: 187 -AKIFVF---SFVLGIVLSLFAT--------------RLSRHFHEKTGKALPLLYISTFL 228 IF+ S G+ L L A + + F + P + Sbjct: 192 LGDIFLLGESSLRFGLSLDLIAILIVLFVGLFISKKIKTNADFIQNETGVRPTTWWKRLS 251 Query: 229 IFGLPTLV-LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287 I LP ++ L AL + H P L FNF GG + ++L+IALS YTAAFIAE VRS Sbjct: 252 IVILPIVITLWALGF--HLGYPELKGFNFKGGIYLRNSLIALWIALSLYTAAFIAENVRS 309 Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347 G+ AV +GQ EAA ALG++ + L++LPQA+R IIPP+ SQ+LNL KNSSLA+AVG+ Sbjct: 310 GIQAVAKGQSEAAYALGISPGRTMSLIILPQALRIIIPPVISQFLNLTKNSSLAIAVGYM 369 Query: 348 DLV-SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 DL ++ G +NQTG+ +E +L+ M IYL +S+ I+ MN N + L E+ Sbjct: 370 DLTGTLMGITLNQTGRELETVLMGMAIYLIISLAISTVMNWYNNSVKLVER 420 >gi|152994192|ref|YP_001339027.1| polar amino acid ABC transporter inner membrane subunit [Marinomonas sp. MWYL1] gi|150835116|gb|ABR69092.1| polar amino acid ABC transporter, inner membrane subunit [Marinomonas sp. MWYL1] Length = 410 Score = 227 bits (579), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 144/378 (38%), Positives = 217/378 (57%), Gaps = 24/378 (6%) Query: 33 LALLLTVIFLWCV-NNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILV 91 + L+L + LW + N N+ + ++ G FL AGF I ++PY SY LV Sbjct: 44 IVLVLVLFGLWFLFANASENLNRLGMTFGFDFLQVTAGFNISWSLIPYDPGMSYWRVFLV 103 Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151 G VNT L+F ++ T+IGT+VG RLS N LV+ + R YVEV RN+P L+ I F + Sbjct: 104 GIVNTLILSFCVIVVGTLIGTVVGILRLSDNPLVSQLARWYVEVVRNVPLLIQIIFWFTV 163 Query: 152 VLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFAT-----R 206 V S LP P S L +FLNNRGL +TM++ + +++ + ++L A R Sbjct: 164 VFSTLPAPRQSYHLGEWLFLNNRGLY--VMTMESTLS---WGWIVALGVALIAALYGLFR 218 Query: 207 LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF------DKPVLGQFNFIGGS 260 S+ ++ +G YI GL L+A F P L FNF GG+ Sbjct: 219 WSKPYYTLSGSRSTGFYI------GLAVWALVACWAIWTFLNSTSLSVPTLQGFNFSGGA 272 Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320 + F + ++A++ Y +A IAE VR+G+ ++ RGQ EAA +G + ++ RL+L+PQA+ Sbjct: 273 FLPASFGAAFVAMTVYRSAAIAETVRAGMQSIDRGQHEAAFTIGFSRVQSLRLILIPQAI 332 Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSI 379 RSIIPP+T+ +L K+SSLAVA+GF +LVSV T +NQTG+AIEII + M Y+ +S+ Sbjct: 333 RSIIPPMTNSWLAATKDSSLAVAIGFPELVSVFMQTSMNQTGRAIEIIFMVMGFYIFISL 392 Query: 380 MIALFMNRLNAKIALKEK 397 +I+ +N+ N + K + Sbjct: 393 LISYLLNKYNDSVQYKVR 410 >gi|297567746|ref|YP_003686717.1| hypothetical protein Mesil_3398 [Meiothermus silvanus DSM 9946] gi|296852195|gb|ADH65209.1| hypothetical protein Mesil_3398 [Meiothermus silvanus DSM 9946] Length = 378 Score = 227 bits (578), Expect = 3e-57, Method: Compositional matrix adjust. Identities = 146/388 (37%), Positives = 220/388 (56%), Gaps = 21/388 (5%) Query: 16 MKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQG 75 M+ L D++V + +Q + + L+ + M+ + GFL + AGF + +G Sbjct: 1 MRVLRDLKVIELLLQTLALGFTLAVLLFLIGTARARMQAQGIPFSFGFLQQEAGFSLSEG 60 Query: 76 IV--------PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAW 127 I PY +Y A L GF+NT + G++ AT++G +VG RLS++ L Sbjct: 61 ITWVPGEGLRPYGPTDTYTQAFLAGFLNTLRVVVGGLVLATLLGFVVGIARLSSHPLARG 120 Query: 128 ICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187 + YVE+ RN P L+ +F Y +VL LP + ++ L FG L+ +GL P + + Sbjct: 121 LALAYVELVRNTPLLLQLFVWYFAVLLKLPPVEQALRL-FGAVLSKQGLFLPWPRLSSVW 179 Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247 F F G++L L R ++ A+ L++ + ++ GLP +V + Sbjct: 180 GEFQAFFWGGVLLLAVGLALRRGWYGMV--AMALVWGAGVVLGGLPLVV----------E 227 Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307 PV F GG +SPEF +L L YTA+FIAEIVR ++AVPRGQ EAA ALGL+ Sbjct: 228 FPVRTSFGLRGGLELSPEFAALLFGLVVYTASFIAEIVRGAVLAVPRGQWEAARALGLSA 287 Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367 + R ++LPQA+R ++PPL +QYLNL KNSSLAVAVGF DL SV TI NQ+G+++E I Sbjct: 288 PQVLRWIILPQAIRIVLPPLANQYLNLTKNSSLAVAVGFPDLFSVYNTIANQSGRSLEGI 347 Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIALK 395 +I M +YL +S+ I+ +N N ++AL+ Sbjct: 348 VIVMGVYLVVSLSISALVNLYNRRVALR 375 >gi|303256338|ref|ZP_07342354.1| amino acid ABC transporter, permease protein [Burkholderiales bacterium 1_1_47] gi|330999033|ref|ZP_08322758.1| putative general L-amino acid transport system permease protein AapQ [Parasutterella excrementihominis YIT 11859] gi|302861067|gb|EFL84142.1| amino acid ABC transporter, permease protein [Burkholderiales bacterium 1_1_47] gi|329575775|gb|EGG57301.1| putative general L-amino acid transport system permease protein AapQ [Parasutterella excrementihominis YIT 11859] Length = 386 Score = 227 bits (578), Expect = 3e-57, Method: Compositional matrix adjust. Identities = 145/372 (38%), Positives = 223/372 (59%), Gaps = 30/372 (8%) Query: 30 QIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAI 89 Q + ++LT+IF + N+ N+ N+ G FL E+AGFEI + ++ ++S +Y A Sbjct: 25 QSAILVVLTIIFGSFIFNISANLAARNIHSGFAFLHEQAGFEIGESLISFSSTEAYFKAF 84 Query: 90 LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 LVG +NT ++ +I AT++G ++G RLS + L+ ++ +VE +RNIP +V + +Y Sbjct: 85 LVGLLNTIKVSVVSIITATVLGVIIGLMRLSKHPLLKFLGAAHVEFYRNIPLIVQLLLIY 144 Query: 150 KSVLSVLPIPDHSIVLPFGMF--LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRL 207 + +LP D + FG + L+ GL F ++ A + F + L+ F TR Sbjct: 145 LIITELLP--DSMEAVNFGSWGLLSKAGLQFAVPASNSTACTWSF---VAAGLAFFLTR- 198 Query: 208 SRHFHEKTGKALPL-LYISTFLI---FGLPTLVLIALKYQLHF------DKPVLGQFNFI 257 PL L I T LI F L T +++ L F KP L F Sbjct: 199 ------------PLFLKIYTGLISTVFSLSTALVVGGAAWLCFGIFGGWSKPELQGFAIE 246 Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317 GG+++SPEF++L+I L+ +T++ IAEI+R+G++AVPRGQ AA ALG+T +A V+ P Sbjct: 247 GGASLSPEFLALWIGLTFFTSSSIAEIIRAGVLAVPRGQWHAAEALGMTRLEAISYVIFP 306 Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377 QA++ IPPL SQY+NL KNSSLAV VG+ DLVS+G + IN GQA+E+I+I M +YL L Sbjct: 307 QALKLAIPPLASQYMNLTKNSSLAVVVGYPDLVSIGNSTINLNGQALEVIVIIMSVYLFL 366 Query: 378 SIMIALFMNRLN 389 +++I++ MN +N Sbjct: 367 NLVISVVMNSIN 378 >gi|218246880|ref|YP_002372251.1| polar amino acid ABC transporter inner membrane subunit [Cyanothece sp. PCC 8801] gi|257059922|ref|YP_003137810.1| polar amino acid ABC transporter inner membrane subunit [Cyanothece sp. PCC 8802] gi|218167358|gb|ACK66095.1| polar amino acid ABC transporter, inner membrane subunit [Cyanothece sp. PCC 8801] gi|256590088|gb|ACV00975.1| polar amino acid ABC transporter, inner membrane subunit [Cyanothece sp. PCC 8802] Length = 390 Score = 226 bits (577), Expect = 3e-57, Method: Compositional matrix adjust. Identities = 149/398 (37%), Positives = 228/398 (57%), Gaps = 26/398 (6%) Query: 14 SRMKFLYDMR-VHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFL---SERAG 69 ++ F D R ++N+ IIL ++L + + N+ N ++ LS + F+ A Sbjct: 5 EKIPFWRDSRFLNNLGQGIILVIVLISVGI-LATNLVTNFQRLGLSFDLSFIFDPKRPAS 63 Query: 70 FEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWIC 129 F I ++PY + Y+ AILVG +N+ + SG+I A I+G VG GRLS N LV I Sbjct: 64 FRIGDSLIPYRATDPYSQAILVGLLNSLRVMISGIILAFILGLTVGLGRLSDNWLVRQIA 123 Query: 130 RVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRG--LSFPTLTMDT-- 185 VY+E RN P L+ +FF Y +V LP D+ FL N+G L +P + T Sbjct: 124 TVYIETIRNTPLLLQLFFWYFAVFLKLPKIDNPAQFLNSFFLCNQGIYLPYPANNLQTWL 183 Query: 186 NAKIFVFSFVLGIVLSLFATRLSRHFHEK------TGKALPLLYISTFLIFGLPTLVLIA 239 + + + GI++ R +++ TGK +Y + + + L+LI Sbjct: 184 ALSLIAINVICGIIIW-------RKYNDNIVQLGTTGK----IYQNLLIAILIIILLLII 232 Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299 F + +GG T+SPEF +L + L+ YTAAFIAE++R+G+ +V +GQ EA Sbjct: 233 WGLNWQFPQYNTESKRILGGLTLSPEFATLLLGLTVYTAAFIAEVIRAGIQSVSQGQWEA 292 Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359 A ALGL RLV+ PQA+R IIPPLTS++LNL+KNSSLAVA+G+ D+ ++ TI NQ Sbjct: 293 AKALGLNSSLVMRLVIFPQALRVIIPPLTSEFLNLVKNSSLAVAIGYNDIYAIANTISNQ 352 Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 TG+A+E++L+ M YL +++IA+ MN+ NA + +KE+ Sbjct: 353 TGKAVEMLLVVMTTYLIFNLIIAVIMNQFNAMVQIKER 390 >gi|166365943|ref|YP_001658216.1| amino-acid ABC-transporter permease protein [Microcystis aeruginosa NIES-843] gi|166088316|dbj|BAG03024.1| amino-acid ABC-transporter permease protein [Microcystis aeruginosa NIES-843] Length = 378 Score = 225 bits (574), Expect = 7e-57, Method: Compositional matrix adjust. Identities = 148/389 (38%), Positives = 227/389 (58%), Gaps = 20/389 (5%) Query: 14 SRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFL---SERAGF 70 + F YD R I +Q+I+ L++ +IF + N+ N ++ LS G GFL A F Sbjct: 5 QKNSFWYDERFQKIFLQVIILLIVCLIFWFFGRNLVINFQRLRLSFGFGFLFDPDRPASF 64 Query: 71 EIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICR 130 I + Y+ +Y A+LVG +N+ + SG+ A +G ++G GRLS N L+ + Sbjct: 65 AIGDSPIAYSPTDTYFRALLVGLLNSLRIMISGIFLAISLGIVIGLGRLSDNWLIRQLAT 124 Query: 131 VYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRG--LSFPTLTMDTNAK 188 +YVE RN P L+ +FF Y +V LP + S+ +FLNN G L FP + T Sbjct: 125 IYVETIRNTPLLLQLFFWYFAVFLKLPKIEESLEFFGSVFLNNSGVYLPFPANSFRTWLA 184 Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248 + + +LGI+LS+F + K +L L T L+ + ++ L++Q Sbjct: 185 LAIM--ILGIILSVF-------LYLKNKLSLCL----TSLLILVIIPLIWGLQWQSPQVN 231 Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308 P+ +F G +S EF +L I L+ YTAAFIAE VR G+ +V RGQ EAA ALGL Sbjct: 232 PLNQNIDF--GLHLSSEFATLLIGLTVYTAAFIAETVRGGIQSVNRGQWEAAKALGLKPL 289 Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368 RLV+ PQA+ IIPPLT++ LNL+KNSSLA+A+G+ D+ ++ TI NQTG+A+E+++ Sbjct: 290 LVMRLVIFPQALPVIIPPLTNECLNLVKNSSLAIAIGYNDIYAISSTIANQTGKAVEMLI 349 Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKEK 397 + M YL +++I+L MN+LN ++ ++E+ Sbjct: 350 VVMATYLFFNLVISLTMNQLNKRVKIQER 378 >gi|254475629|ref|ZP_05089015.1| glutamate/glutamine/aspartate/asparagine transport system permease protein [Ruegeria sp. R11] gi|214029872|gb|EEB70707.1| glutamate/glutamine/aspartate/asparagine transport system permease protein [Ruegeria sp. R11] Length = 410 Score = 223 bits (567), Expect = 5e-56, Method: Compositional matrix adjust. Identities = 156/394 (39%), Positives = 230/394 (58%), Gaps = 20/394 (5%) Query: 21 DMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYT 80 D R +++ Q I AL+L + + NN+ N+ + L++ FL + +G++I+Q +V Y Sbjct: 20 DTRYRSLTFQAIAALVLALAIWYLGNNLIQNLRAAGLNISYNFLGDPSGYDINQRLVEYD 79 Query: 81 SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140 S SS+A A LVG +NT ++ I ATI G + G RLS N LV+ + VYVE+FRNIP Sbjct: 80 SQSSHARAALVGVLNTLLVSVLACITATIFGVIAGVLRLSNNWLVSKLMAVYVEIFRNIP 139 Query: 141 PLVVIFFLYKSVLSVLPIPDH--------SIVLPFGMFLNNRGLSFPTLTMDT----NAK 188 L+ I ++ + +V+P P S+VL F NRG+ P +T +A Sbjct: 140 VLIWIIIIFTIMTAVMPGPREFRGDNATSSMVLDLFAF-TNRGVYIPMPWFETGLFASAT 198 Query: 189 IFVFSFVLGIVLSLFATRL----SRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244 + + +V S F R + E+TG +I+ + L LVL+ L Sbjct: 199 MNWLLVIATLVGSFFVMRKVENNATKTQEETGIRPNTKWIALGVW--LVPLVLLLFLMGL 256 Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304 ++ P L FNF GG + ++L+ ALS YT AFIAE VR+G+ A+ +GQ EAA ALG Sbjct: 257 SWEVPALKGFNFSGGIKIGGPLIALWFALSIYTGAFIAENVRAGIQAINKGQTEAAAALG 316 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV-SVGGTIINQTGQA 363 L + LV+LPQA+R IIPPL S +LN+ KNSSLA+AVG+AD+ ++GG +NQTG+A Sbjct: 317 LRPGRIMNLVVLPQALRVIIPPLISNFLNITKNSSLAIAVGYADITATLGGITLNQTGRA 376 Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 IE +L+ M YL+ S+ I++ MN NA + LKE+ Sbjct: 377 IECVLLLMLFYLTASLTISMVMNVYNASVKLKER 410 >gi|222102264|ref|YP_002546854.1| ABC-type amino acid transport system, permease component [Agrobacterium radiobacter K84] gi|221728381|gb|ACM31390.1| ABC-type amino acid transport system, permease component [Agrobacterium radiobacter K84] Length = 397 Score = 223 bits (567), Expect = 5e-56, Method: Compositional matrix adjust. Identities = 145/370 (39%), Positives = 209/370 (56%), Gaps = 18/370 (4%) Query: 35 LLLTVIFLWCVN-NVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGF 93 LL+ LW N+ M + + G FLS+RA FEI + ++ Y+S SY A+L G Sbjct: 39 LLVCCTVLWYFGINIAATMRRLGIEPGFAFLSQRANFEIGESLIAYSSADSYGRALLAGL 98 Query: 94 VNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVL 153 VNT ++A G I +T +GT +G +L+ N ++ R YVE+FRN P L++ FL+ ++ Sbjct: 99 VNTIYVAVLGCILSTALGTALGIAQLTRNLVLTSFVRSYVEIFRNTP-LLLQLFLWSAIF 157 Query: 154 SVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIF--VFSFVLGIVLSLFATRL--SR 209 LP ++I L G FL+NRGL P L + +A + S + G+++ + RL R Sbjct: 158 QNLPAARNAIKLA-GAFLSNRGLYVPKLLLAGDAPVASTALSVLCGLIVVIALRRLLLGR 216 Query: 210 HFHE-KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268 F+ + A + +TF + G + D P G FN GG ++SPEF Sbjct: 217 PFYATQISLAAIIAASATFWLSG----------GGIDLDLPTKGGFNITGGLSLSPEFAG 266 Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328 L L +AA +AEIVR G+ +V GQ EAA +LGL RL++LPQA+R I P +T Sbjct: 267 LLAGLVFNSAATVAEIVRGGIQSVQNGQWEAARSLGLRPGHIMRLIVLPQALRVITPLMT 326 Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388 S YL+L KNSSLAVA+GF DLV+V T N TGQ +E I I YLSL++ ++L MN Sbjct: 327 SSYLDLTKNSSLAVAIGFPDLVNVANTTANTTGQTLEAIAIIAGAYLSLNLAVSLAMNLF 386 Query: 389 NAKIALKEKK 398 N++I E + Sbjct: 387 NSRIVQIEGR 396 >gi|261317402|ref|ZP_05956599.1| amino acid ABC transporter [Brucella pinnipedialis B2/94] gi|261296625|gb|EEY00122.1| amino acid ABC transporter [Brucella pinnipedialis B2/94] Length = 208 Score = 222 bits (566), Expect = 7e-56, Method: Compositional matrix adjust. Identities = 106/205 (51%), Positives = 151/205 (73%) Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252 + ++GI+ S R ++ TG+ + +S LI GLP L LIA + + FD P LG Sbjct: 4 ALLIGILASFAVARWAKRRQMATGQPFHTIRVSAALIIGLPILALIATGFPVSFDVPKLG 63 Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312 FN GG+ + PEF++L++ALS YTA+FIAE VR+G++ V +GQ EAA A+GL + R Sbjct: 64 TFNLTGGAQIKPEFLALFLALSFYTASFIAETVRAGVLGVSKGQTEAAYAVGLRSGQTMR 123 Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372 L+++PQA+R IIPPL+SQYLNL+KNSSLA+A+G+ DLV+VGGTI+NQTGQA+E++ IWM Sbjct: 124 LIIVPQALRIIIPPLSSQYLNLIKNSSLAIAIGYPDLVAVGGTILNQTGQAVEVVAIWMV 183 Query: 373 IYLSLSIMIALFMNRLNAKIALKEK 397 IYL +S++++ MN NAK+AL E+ Sbjct: 184 IYLGISLIVSGLMNWFNAKMALVER 208 >gi|163742835|ref|ZP_02150219.1| predicted amino-acid transporter subunit [Phaeobacter gallaeciensis 2.10] gi|161383799|gb|EDQ08184.1| predicted amino-acid transporter subunit [Phaeobacter gallaeciensis 2.10] Length = 361 Score = 221 bits (563), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 129/355 (36%), Positives = 207/355 (58%), Gaps = 3/355 (0%) Query: 46 NNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMI 105 +NV N++ L+ G GFL A F+I +VPY SYA ++G NT +A + Sbjct: 7 DNVSRNLQNLGLASGFGFLDIEAPFDISWSVVPYEPGDSYARVYVIGITNTLIVAAMAIA 66 Query: 106 PATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSI-V 164 +T +G L+G RLS N L++ + VYVEV RN P L+ + F + +V S+LP P + V Sbjct: 67 ASTGLGFLIGIARLSRNWLISRLASVYVEVVRNTPALIQVLFWFLAVFSILPRPKDGVDV 126 Query: 165 LPFGMF-LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223 G+ +NNRG+ FP + + + + +V ++ +R TG+ P+ Sbjct: 127 AGLGILQVNNRGIYFPRALPQDGFNVTLLAIAIAVVAAVVLGIWARRRRILTGQRFPVAL 186 Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283 + ++ P V + L+++ PVL FN GG + P ++ ++LS Y AA+I E Sbjct: 187 VMPAILVLFPATVFVLTGAPLNWEIPVLKGFNLTGGISFPPAMCAVVLSLSIYHAAYIGE 246 Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343 VR+G+++V GQ EAA +LG+ + R+++LPQA+R+I+P L S ++N +KN+SLAVA Sbjct: 247 AVRAGIMSVSPGQGEAAFSLGIKSSWSMRMIVLPQALRAIVPQLISNWMNAVKNTSLAVA 306 Query: 344 VGFADLVSVG-GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 +GF DLV++ T +NQ G A+EI+ + M Y S+SI I+L +N N ++ LKE+ Sbjct: 307 IGFPDLVALFLQTSLNQVGYAVEIVAMVMIFYCSVSITISLLLNYYNKRVQLKER 361 >gi|326794955|ref|YP_004312775.1| polar amino acid ABC transporter inner membrane subunit [Marinomonas mediterranea MMB-1] gi|326545719|gb|ADZ90939.1| polar amino acid ABC transporter, inner membrane subunit [Marinomonas mediterranea MMB-1] Length = 418 Score = 221 bits (562), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 138/358 (38%), Positives = 208/358 (58%), Gaps = 11/358 (3%) Query: 46 NNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMI 105 +N NN+++ + G FL AGF I ++PY S +Y VG +NT L+ + Sbjct: 66 SNAANNLDRLGMHFGFDFLQVTAGFNISWSVIPYDSSMTYWRVFAVGVLNTLVLSALVIF 125 Query: 106 PATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVL 165 TI+GT VG RLS N L++ R YVE+ RN+P L+ + F + V S LP P S + Sbjct: 126 VGTILGTFVGILRLSNNPLISQFARWYVEIVRNVPLLIQVIFWFTVVFSTLPPPRKSYSI 185 Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFA--TRLSRHFHEKTGKALPLLY 223 FLNNRGL PT+ + + +VF+ V+ + L+A + SR H KTGK Y Sbjct: 186 ADVFFLNNRGLYIPTIELSISFW-WVFALVIALGAGLWAIIRQSSRSVH-KTGKRTTTFY 243 Query: 224 ISTFL---IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280 I + IF L L+L + P L FNF G+ + + ++A++ Y +A Sbjct: 244 ILVLIWCVIFALSALLLAQWG---TWSIPELKGFNFRDGAFLPASLGAAFVAMTVYRSAA 300 Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340 IAE VR+G+ ++ RGQ EAA +G + ++ RL+L+PQA+R+IIPP+T+ +L K+SSL Sbjct: 301 IAETVRAGMQSIDRGQSEAAFTIGFSRFQSLRLILIPQAVRAIIPPMTNSWLAATKDSSL 360 Query: 341 AVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 AVA+GF +LVSV T INQTG+A+EII + M Y+ +S++I+ +N+ N + K + Sbjct: 361 AVAIGFPELVSVFMQTSINQTGRALEIISMVMGFYIVISLVISYLLNKYNDLVQYKVR 418 >gi|126659577|ref|ZP_01730708.1| putative amino acid ABC transporter permease protein [Cyanothece sp. CCY0110] gi|126619120|gb|EAZ89858.1| putative amino acid ABC transporter permease protein [Cyanothece sp. CCY0110] Length = 392 Score = 221 bits (562), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 141/358 (39%), Positives = 208/358 (58%), Gaps = 10/358 (2%) Query: 46 NNVYNNMEKSNLSLGIGFLSE---RAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFS 102 NN+ NN + L+ G GF+ + + F + +PY Y AILVG +N+ + + Sbjct: 39 NNLINNFRQLGLTFGFGFIFDPDLNSRFNLGDSPIPYQPTDPYYRAILVGLLNSLRVMIT 98 Query: 103 GMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHS 162 G+I A +G +VG GRLS N LV I +YVE+ RN P L+ +FF Y +V P + Sbjct: 99 GIILAFFLGVIVGLGRLSDNWLVQKIATIYVEIIRNTPLLLQLFFWYFAVFLKFPKINDP 158 Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHF---HEKTGKAL 219 +++ +FL+N+G+ P + + + + LG +++ R TGKA Sbjct: 159 LIVFNTIFLSNQGVYLPFPLSNLQTLLAILALFLGGIMAFLIWRKQTKVIIQQGTTGKAY 218 Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279 + IS ++ ++ L +Q L Q G +SPEF +L L+ YTAA Sbjct: 219 NISLISILIL--SILIIFFGLYWQFPNYDTQLQQIQ--NGLNLSPEFATLLTGLTIYTAA 274 Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339 FIAE+VRSG+ +V +GQ EAA ALGL A RLV+ PQA+R +IPPLTS++LNL KNSS Sbjct: 275 FIAEVVRSGIQSVSKGQWEAAKALGLNSGLAMRLVIFPQALRVMIPPLTSEFLNLAKNSS 334 Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 LAVA+G+ D+ +V TI NQTG++IE++LI M YL +++I+ MN+LN + LKEK Sbjct: 335 LAVAIGYNDIYAVSNTISNQTGKSIEMLLIVMATYLIFNLIISSGMNQLNHLVQLKEK 392 >gi|265988439|ref|ZP_06100996.1| LOW QUALITY PROTEIN: amino acid ABC transporter [Brucella pinnipedialis M292/94/1] gi|264660636|gb|EEZ30897.1| LOW QUALITY PROTEIN: amino acid ABC transporter [Brucella pinnipedialis M292/94/1] Length = 317 Score = 220 bits (560), Expect = 4e-55, Method: Compositional matrix adjust. Identities = 106/205 (51%), Positives = 151/205 (73%) Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252 + ++GI+ S R ++ TG+ + +S LI GLP L LIA + + FD P LG Sbjct: 113 ALLIGILASFAVARWAKRRQMATGQPFHTIRVSAALIIGLPILALIATGFPVSFDVPKLG 172 Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312 FN GG+ + PEF++L++ALS YTA+FIAE VR+G++ V +GQ EAA A+GL + R Sbjct: 173 TFNLTGGAQIKPEFLALFLALSFYTASFIAETVRAGVLGVSKGQTEAAYAVGLRSGQTMR 232 Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372 L+++PQA+R IIPPL+SQYLNL+KNSSLA+A+G+ DLV+VGGTI+NQTGQA+E++ IWM Sbjct: 233 LIIVPQALRIIIPPLSSQYLNLIKNSSLAIAIGYPDLVAVGGTILNQTGQAVEVVAIWMV 292 Query: 373 IYLSLSIMIALFMNRLNAKIALKEK 397 IYL +S++++ MN NAK+AL E+ Sbjct: 293 IYLGISLIVSGLMNWFNAKMALVER 317 >gi|126731934|ref|ZP_01747737.1| amino acid ABC transporter, permease protein [Sagittula stellata E-37] gi|126707466|gb|EBA06529.1| amino acid ABC transporter, permease protein [Sagittula stellata E-37] Length = 417 Score = 219 bits (558), Expect = 6e-55, Method: Compositional matrix adjust. Identities = 141/396 (35%), Positives = 229/396 (57%), Gaps = 18/396 (4%) Query: 19 LYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVP 78 ++D R ++ Q +LAL++ + + N N+ N G F + +I Sbjct: 23 VFDSRARSLFFQGVLALIIIGLIWLALQNAAQNLADQNKEFGFDFFDRPSDIQILTTFGT 82 Query: 79 YTSD-----SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYV 133 + D S+ L+ NT +A +G+ ATI G L+G RLS+N ++ +YV Sbjct: 83 WLLDYQPGQSTIFDVFLLSIANTLIVAIAGIFFATIWGFLLGIFRLSSNFVLRGFATIYV 142 Query: 134 EVFRNIPPLVVIFFLYKSVLSVLPIPDHSI---VLPFGMFLNNRGLSFPTLTMDTNAKIF 190 E+ RN+P L+ IFF + +V+ ++ + + ++P + + +G+ P ++ Sbjct: 143 ELLRNVPLLLQIFF-WTAVMRIVAPSERGVYTTLIPGLLQFDAKGMYGPFPIVEDGFGFT 201 Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVL------IALKYQL 244 + +F++ + + R ++ +KTG+ P+ +S +I LPTLV I +++ Sbjct: 202 LAAFIIACIGAWAYARWAKKRQDKTGQPSPVFLVSLGMIVVLPTLVYLITGRPITIEWPN 261 Query: 245 HF-DKPVLGQ-FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302 + + P+ Q F GS ++PEF++L++AL YTAAFIAEIVR+G+ AVP+GQ EAA A Sbjct: 262 YVTEGPIFRQGFEKGVGSYIAPEFVALFLALFTYTAAFIAEIVRAGIQAVPKGQSEAAGA 321 Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTG 361 LGL R V+LPQA R I+PPLTSQYLNL KNSSLA A+G+ +LV+ GTI+NQ G Sbjct: 322 LGLPDGLTMRKVVLPQAFRVIVPPLTSQYLNLTKNSSLAAAIGYPELVAAFAGTILNQVG 381 Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 +AIEII + + +YL++S++ + FMN N ++AL E+ Sbjct: 382 RAIEIIAVVILVYLTISLLTSAFMNWFNNRVALVER 417 >gi|284052500|ref|ZP_06382710.1| polar amino acid ABC transporter, inner membrane subunit [Arthrospira platensis str. Paraca] Length = 390 Score = 218 bits (556), Expect = 9e-55, Method: Compositional matrix adjust. Identities = 141/359 (39%), Positives = 208/359 (57%), Gaps = 17/359 (4%) Query: 47 NVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIP 106 N+ N+++S + G GFL+ AGF I + I+PY Y +L G VNT + F G+I Sbjct: 41 NLNQNLQRSGIRFGFGFLNSTAGFAIGESIIPYQPTDPYRQVLLAGLVNTLRVMFFGIIL 100 Query: 107 ATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLP 166 TI+G + G S+N LV I VYVE+ RN P L+ + F Y L + + D V Sbjct: 101 TTIVGIIAGISYFSSNWLVRQIGLVYVEIVRNTPLLLQLLFWYGIFLQLPSVSDRLGVFD 160 Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFV---FSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223 +FL RG+ P +++ I+V F + I + ++ EK P L Sbjct: 161 -AIFLTQRGIFIP---WPSSSLIWVWLGFLVIAAIASFWIWKQRTKIMVEKGASGQPQL- 215 Query: 224 ISTFLIFGLPTLV-LIALKYQLHFDKPVL-GQFN---FIGGSTVSPEFMSLYIALSCYTA 278 + G+ LV L+ + + ++ P + G N GG ++ EF +L + L YTA Sbjct: 216 ----IALGIIALVSLLIILFGFGWEVPAITGTENNPVLRGGIRLTIEFSALLVGLVFYTA 271 Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338 A+IAEIVR+G+ +V +GQ EAA +LGL RLV+ PQA+R IIPPL SQYLNL KNS Sbjct: 272 AYIAEIVRAGIQSVAKGQWEAARSLGLKPGLVMRLVVFPQALRVIIPPLNSQYLNLAKNS 331 Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 SLA+AV +ADL +V T NQ+G+A+E++LI M YL+++++I+LFMN LN ++ L+E+ Sbjct: 332 SLAIAVAYADLYNVANTTFNQSGRAVEVMLIIMATYLTINLIISLFMNFLNRRVQLQER 390 >gi|291569087|dbj|BAI91359.1| putative ABC transporter permease protein [Arthrospira platensis NIES-39] Length = 390 Score = 217 bits (553), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 140/359 (38%), Positives = 208/359 (57%), Gaps = 17/359 (4%) Query: 47 NVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIP 106 N+ N+++S + G GFL+ AGF I + I+PY Y +L G VNT + F G+I Sbjct: 41 NLNQNLQRSGIRFGFGFLNSTAGFAIGESIIPYQPTDPYRQVLLAGLVNTLRVMFFGIIL 100 Query: 107 ATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLP 166 TI+G + G S+N LV I VYVE+ RN P L+ + F Y L + + D V Sbjct: 101 TTIVGIIAGISYFSSNWLVRQIGLVYVEIVRNTPLLLQLLFWYGIFLQLPSVSDRLGVFD 160 Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFV---FSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223 +FL RG+ P +++ I+V F + I + ++ EK P L Sbjct: 161 -AIFLTQRGIFIP---WPSSSLIWVWLGFLVIAAIASFWIWKQRTKIMVEKGASGQPQL- 215 Query: 224 ISTFLIFGLPTLV-LIALKYQLHFDKPVL-GQFN---FIGGSTVSPEFMSLYIALSCYTA 278 + G+ LV L+ + + ++ P + G N GG ++ EF +L + L YTA Sbjct: 216 ----IALGIIALVSLLIILFGFGWEVPAITGTENNPVLRGGLRLTIEFSALLVGLVFYTA 271 Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338 A+IAEIVR+G+ +V +GQ EAA +LGL RLV+ PQA+R IIPPL SQYLNL KNS Sbjct: 272 AYIAEIVRAGIQSVAKGQWEAARSLGLKPGLVMRLVVFPQALRVIIPPLNSQYLNLAKNS 331 Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 SLA+AV +ADL +V T NQ+G+A+E+++I M YL+++++I+LFMN LN ++ L+E+ Sbjct: 332 SLAIAVAYADLYNVANTTFNQSGRAVEVMVIIMATYLTINLIISLFMNFLNRRVQLQER 390 >gi|159029747|emb|CAO87825.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 378 Score = 216 bits (549), Expect = 6e-54, Method: Compositional matrix adjust. Identities = 148/391 (37%), Positives = 225/391 (57%), Gaps = 24/391 (6%) Query: 14 SRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFL--SER-AGF 70 + F YD R I +Q+I+ L++ +IF + N+ N ++ LS G GFL S+R A F Sbjct: 5 QKNSFWYDERFQKIFLQVIILLIVCLIFWFFCRNLVINFQRLRLSFGFGFLFDSDRPASF 64 Query: 71 EIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICR 130 I + Y+ +Y A+LVG VN+ + +G+ A +G ++G GRLS N L+ + Sbjct: 65 AIGDSPIAYSPTDTYFRALLVGLVNSLRIMITGIFLAISLGIVIGLGRLSDNWLIRQLAT 124 Query: 131 VYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRG--LSFPTLTMDT--N 186 +YVE RN P L+ +FF Y +V LP + S+ +FLNN G L FP + T Sbjct: 125 IYVETIRNTPLLLQLFFWYFAVFLKLPKIEESLEFFGRVFLNNSGVYLPFPANSFRTWLA 184 Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246 I + ++ + LSL K +L L T L+ + ++ L++Q Sbjct: 185 LAIIILGIIISVFLSL-----------KNKLSLCL----TSLLILVIIPLIWGLQWQNPQ 229 Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306 P+ +F G +S EF +L I L+ YTAAFIAE VR G+ +V RGQ EAA ALGL Sbjct: 230 VNPLNQNIDF--GLHLSSEFATLLIGLTVYTAAFIAETVRGGIQSVNRGQWEAAKALGLK 287 Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 RLV+ PQA+ IIPPLT++ LNL+KNSSLA+A+G+ D+ ++ TI NQTG+A+E+ Sbjct: 288 PLLVMRLVIFPQALPVIIPPLTNECLNLVKNSSLAIAIGYNDIYAISSTIANQTGKAVEM 347 Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 + + M YL +++I+L MN+LN ++ ++E+ Sbjct: 348 LTVVMATYLFFNLVISLTMNQLNKRVKIQER 378 >gi|329295741|ref|ZP_08253077.1| polar amino acid ABC transporter inner membrane subunit [Plautia stali symbiont] Length = 359 Score = 214 bits (545), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 126/318 (39%), Positives = 186/318 (58%), Gaps = 1/318 (0%) Query: 43 WCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFS 102 + ++N N+ ++ G GFL AGF I Q ++ Y+ +YA +VG NT ++ Sbjct: 37 YLIHNTVINLANRGITSGFGFLERNAGFGIVQHLIDYSEGDTYARVFMVGLTNTLLISAL 96 Query: 103 GMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHS 162 ++ A+I+G +G RLS N L+ + +Y+E FRNIPPL+ IFF Y +VL LP P + Sbjct: 97 CIVFASILGFAIGLARLSDNWLLRKLSTIYIETFRNIPPLLQIFFWYFAVLRNLPGPRQA 156 Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222 + F++NRGL P + + + + I R +R KTG+ Sbjct: 157 LNAFDLAFVSNRGLYIPWPEYAPSTWPSLIALAIAIAAIAALFRFNRKHQLKTGQLRRTW 216 Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282 + LI LP + H+D P L FNF GG + PE +L +ALS YT++FIA Sbjct: 217 PAAAGLIVLLPLIAHTLFGAATHWDVPELRGFNFRGGFAMIPELAALTLALSIYTSSFIA 276 Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342 E++R+G+ +VP GQ EAA +LGL + R V++PQAMR IIPPLTSQYLN++KNSSLA Sbjct: 277 EVIRAGIQSVPHGQSEAARSLGLPNPVTLRQVIIPQAMRVIIPPLTSQYLNIIKNSSLAA 336 Query: 343 AVGFADLVSV-GGTIINQ 359 A+G+ D++S+ GT++NQ Sbjct: 337 AIGYPDMMSLFAGTVLNQ 354 >gi|197104925|ref|YP_002130302.1| ABC-type amino acid transport system, permease component [Phenylobacterium zucineum HLK1] gi|196478345|gb|ACG77873.1| ABC-type amino acid transport system, permease component [Phenylobacterium zucineum HLK1] Length = 388 Score = 212 bits (540), Expect = 7e-53, Method: Compositional matrix adjust. Identities = 123/319 (38%), Positives = 187/319 (58%), Gaps = 3/319 (0%) Query: 51 NMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATII 110 N++ L LG+ FL +RAGF+I ++P+ + +Y AI V NT +L+ + AT+I Sbjct: 45 NLQARGLPLGLEFLGDRAGFKIADTVLPFGPEDTYLQAIGVAVANTVFLSALVCVAATVI 104 Query: 111 GTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMF 170 GT +G RLSAN LVA + V+VE RN PP++++ FLY V+P+ +LP G+ Sbjct: 105 GTALGVARLSANPLVAGLAAVWVEAMRNTPPVLLLIFLYAYWGQVMPVGGARELLP-GLL 163 Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230 ++ RG++ P L + + G + A R + + ++ Sbjct: 164 VSIRGVAAPRLVAEWPLLGLAGALAAGAAVYGAAALAGRAAARRGRPRPHRAAAAGVIVL 223 Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290 G L A+ L + P + GG+ ++PEF +++ L+ YTAAFIAEIVRSG+ Sbjct: 224 G--ALAAFAIHPPLRLETPAATGDDLAGGARLTPEFATVFAGLTVYTAAFIAEIVRSGVQ 281 Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 +VPRGQ EAA ALGL R+ RLV PQ +R I+PP+TSQY+N +KNS+LA+A+G+++ + Sbjct: 282 SVPRGQWEAARALGLKERQILRLVAFPQMLRVIVPPMTSQYINTVKNSTLAIAIGYSEFM 341 Query: 351 SVGGTIINQTGQAIEIILI 369 +V GT+IN+T IE LI Sbjct: 342 TVMGTVINRTNHPIEGTLI 360 >gi|319940741|ref|ZP_08015082.1| hypothetical protein HMPREF9464_00301 [Sutterella wadsworthensis 3_1_45B] gi|319805801|gb|EFW02575.1| hypothetical protein HMPREF9464_00301 [Sutterella wadsworthensis 3_1_45B] Length = 392 Score = 212 bits (539), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 140/368 (38%), Positives = 215/368 (58%), Gaps = 12/368 (3%) Query: 28 SVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYAT 87 ++Q +L L+L NV +N+ N+ G FL+ RAGFEI + ++ Y+S Sbjct: 29 TLQAVLILILVAFIAVLATNVADNLAAKNIHSGFAFLNHRAGFEIGEQLIAYSSSDPLWK 88 Query: 88 AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147 A L G +NT ++ ++ AT++G +VG RLS N +V ++ +VE +RN+P LV++ Sbjct: 89 AFLTGLLNTLRISACTIVSATVLGVIVGLMRLSRNGVVRFLGAAHVEAYRNVPLLVLLLA 148 Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLNNRGL--SFPTLTMDTNAKIFVFSFVLGIVLSLFAT 205 LY V +LP + L ++L+ GL + P M K + + V+G+ A Sbjct: 149 LYLVVTELLPGVRQAWHLGNWIYLSKTGLLCAVPLWGM----KALLGALVVGVFGGWLAA 204 Query: 206 RLSRHFHEKTGKALPLLYISTFLIFG-LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP 264 + + + + FLIF L LV I +D P +F+ GG+ ++P Sbjct: 205 KRLQRVQTNL-----IANMGGFLIFVILSALVWILCGVIGGWDHPTATRFSMRGGAAMTP 259 Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 EF++L++ L+ +T+A IAEIVR+G+ +V GQ AA ALGL +A V+ PQAMR I+ Sbjct: 260 EFLTLWLGLTLFTSASIAEIVRAGVESVRPGQWAAAAALGLKSGEAVSYVIFPQAMRLIM 319 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 PPL SQ++ L KNSSLAV VG+ DLV+VG T++N TGQA+E+I I M +YL+++I+IA Sbjct: 320 PPLASQFMTLTKNSSLAVMVGYPDLVNVGTTVMNVTGQALEVICIIMGVYLTVNIIIAFI 379 Query: 385 MNRLNAKI 392 MN NA+I Sbjct: 380 MNHFNARI 387 >gi|67922407|ref|ZP_00515918.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Crocosphaera watsonii WH 8501] gi|67855751|gb|EAM50999.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Crocosphaera watsonii WH 8501] Length = 392 Score = 211 bits (538), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 146/391 (37%), Positives = 228/391 (58%), Gaps = 12/391 (3%) Query: 14 SRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSE---RAGF 70 ++ F D R+ + +Q+++ ++ ++ ++ NN+ NN + L+ G GF+ + + F Sbjct: 7 EKIPFWRDSRIIKVVIQVLVIGVILLLLVFFGNNLVNNFRQLGLTFGFGFIFDPELNSRF 66 Query: 71 EIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICR 130 I +PY Y AILVG +N+ + +G+I A I+G ++G GRLS N LV I Sbjct: 67 NIGDSPIPYQPTDPYYRAILVGLLNSLRVMITGIILAFILGVIIGLGRLSDNWLVQKIAT 126 Query: 131 VYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGL--SFPTLTMDTNAK 188 VYVE+ RN P L+ +FFLY +V P D +++ +FL+N+G+ FP + T Sbjct: 127 VYVEIIRNTPLLLQLFFLYFAVFLKFPKIDAPLIIFNSVFLSNQGVYVPFPLANLQTFLA 186 Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEK--TGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246 I F G++ L + ++ ++ TG L I ++ L ++ ++ + Sbjct: 187 ILTL-FFGGVIAFLIWRKQTQTIIQQGTTGNFYNLALIVIIIVSILTIILGFDWEFP-SY 244 Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306 D + G +SPEF +L L+ YTA FIAE+VRSG+ +V +GQ EAA ALGL Sbjct: 245 DSQIK---RIQDGLNISPEFATLLAGLTIYTAGFIAEVVRSGIQSVSKGQWEAAKALGLN 301 Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 A RLV+ PQA+R +IPPLTS++LNL KNSSLAVA+G+ D+ +V TI NQTG++IE+ Sbjct: 302 SGLAMRLVIFPQALRVMIPPLTSEFLNLAKNSSLAVAIGYNDIYAVSNTISNQTGKSIEM 361 Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 +L+ M YL +++I+ MN LN + LKEK Sbjct: 362 LLVVMATYLIFNLIISTVMNLLNRSVQLKEK 392 >gi|158334196|ref|YP_001515368.1| polar amino acid ABC transporter, permease protein, putative [Acaryochloris marina MBIC11017] gi|158304437|gb|ABW26054.1| polar amino acid ABC transporter, permease protein, putative [Acaryochloris marina MBIC11017] Length = 389 Score = 211 bits (536), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 135/376 (35%), Positives = 208/376 (55%), Gaps = 1/376 (0%) Query: 23 RVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSD 82 R+ N +Q ++ LL+ + ++ N+ N+++ L G FL ++G I + ++ Y+ Sbjct: 14 RIRNGLIQGLVLLLIGLAVVYFGANLVQNLQRLRLPFGFDFLFAKSGPSIGETLIEYSPT 73 Query: 83 SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142 + A A V +NT + G++ AT++G VG RLS N LV + YVE RN P L Sbjct: 74 DNIARAFGVALLNTLRVVVLGIVLATVVGIGVGMARLSDNWLVRKLATFYVETLRNFPLL 133 Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL 202 + + F Y +V LP ++ I LP + L+ G++FP L + ++ + +G V + Sbjct: 134 LQLLFWYLAVFLKLPTFENRIQLPGPIILSKNGVAFPWLKGNPATLPWILALAIGSVCAC 193 Query: 203 FATRLSRHFHEKTGK-ALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGST 261 R + G+ L+ L+ LI + P + Q GG Sbjct: 194 LLWRYLIRLQIEQGRITFAGLWSLLLLVGIGGGAALITQRLPFDVSLPHVDQRVVTGGLQ 253 Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321 ++ EF +L + L+ YTAAFIAEIVR+G+ +V GQ EAA ALGL R V+ PQA+R Sbjct: 254 LTSEFSALLLGLTLYTAAFIAEIVRAGIRSVSIGQSEAARALGLKPTLVMRFVVFPQALR 313 Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 I+PPLTSQYLNL KNSSLAVAVG+ D+ V + TG+++EI+L+ M IYL++S++I Sbjct: 314 VIVPPLTSQYLNLAKNSSLAVAVGYPDIYYVASASLEDTGRSVEIVLLLMAIYLTMSLLI 373 Query: 382 ALFMNRLNAKIALKEK 397 ++ MN N I L E+ Sbjct: 374 SILMNLYNRSIQLVER 389 >gi|153821327|ref|ZP_01973994.1| amino acid ABC transporter, permease protein [Vibrio cholerae B33] gi|126521145|gb|EAZ78368.1| amino acid ABC transporter, permease protein [Vibrio cholerae B33] Length = 332 Score = 209 bits (533), Expect = 4e-52, Method: Compositional matrix adjust. Identities = 129/331 (38%), Positives = 184/331 (55%), Gaps = 8/331 (2%) Query: 3 KNARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIG 62 K +T + LY+ ++ Q++ +L VNN N+E ++ G Sbjct: 6 KATPETSDAHSKHTNLLYNPTFRSVVFQLLAVCVLAFFLYTIVNNALTNLESRGIATGFA 65 Query: 63 FLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN 122 FL + AGF I Q ++PY SY LVG +NT ++ G++ ATI+G L+G RLS+N Sbjct: 66 FLEQTAGFGISQSLIPYDETYSYGRTFLVGLLNTALVSVLGILLATILGFLIGIARLSSN 125 Query: 123 KLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLT 182 L++ + VY+E FRN+P L+ IFF Y VL LP S+ L +LN +GL Sbjct: 126 WLISRLAAVYIETFRNLPLLLQIFFWYFVVLQALPSARESMHLGEWFYLNIKGLYLAKPI 185 Query: 183 MDTNAKIFVFSFVLGI----VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLI 238 ++ + + + + GI VLS++AT R TG+ P+ L P LV Sbjct: 186 FESGSIWVLVALIAGIIACWVLSIWATNRQR----LTGQQTPMGRYILLLCVTFPVLVYF 241 Query: 239 ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQME 298 L + + PVL FNF GG +V PE +L +AL+ YTA+FIAEIVRSG+ AV GQ E Sbjct: 242 LLGQPITAEYPVLRGFNFQGGISVLPELAALLVALTIYTASFIAEIVRSGINAVSHGQTE 301 Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329 AA++LGLT K +LV++PQA+R IIPPLTS Sbjct: 302 AAMSLGLTRTKTLKLVIIPQALRIIIPPLTS 332 >gi|87120914|ref|ZP_01076806.1| general amino acid ABC transporter, permease protein [Marinomonas sp. MED121] gi|86163752|gb|EAQ65025.1| general amino acid ABC transporter, permease protein [Marinomonas sp. MED121] Length = 383 Score = 209 bits (532), Expect = 5e-52, Method: Compositional matrix adjust. Identities = 129/380 (33%), Positives = 219/380 (57%), Gaps = 2/380 (0%) Query: 19 LYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVP 78 L D R I Q++ ++++ + N+ N+ + +S G FL + AG++I ++ Sbjct: 5 LRDERKRAIFDQVLFLVIVSAFIYYLSANLIENLNRLGISTGFSFLWQEAGYQIGGALID 64 Query: 79 YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138 + SYA A +VG +NT F ++ A+I+G ++G R+S N L+ R +EV RN Sbjct: 65 FDDTDSYALAHIVGLLNTLLATFLIIVSASILGFIIGILRMSPNPLMTNSIRYVIEVIRN 124 Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198 IP LV I + L + P+ S + +F++NRG+ P ++ +F F+ + Sbjct: 125 IPSLVHIVIWFSLALHLPPV-RQSFDIYNTVFISNRGIYLPDPNFESGMWGVLFLFICLL 183 Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258 + F R ++ +TGK +T +I+G + + + P L F+F G Sbjct: 184 AYAFFRKRKAQQLMRETGKYQATFLSNTLIIWGGTICAYLLFGLPITWQAPTLSGFDFDG 243 Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G T++PE +++IALS Y ++ +AE+VR G+ +V +GQ EAA ALG+ + ++V++PQ Sbjct: 244 GITIAPELFAIWIALSIYFSSHVAELVRGGVQSVSKGQFEAASALGVRYSITMKMVVIPQ 303 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS-VGGTIINQTGQAIEIILIWMFIYLSL 377 AMR I+PPLT+ Y N+LK +SL VA+G+A++ + GGT +N TGQAIE IL+ M Y + Sbjct: 304 AMRVIVPPLTNVYQNILKTTSLGVAIGYAEMTATTGGTTLNLTGQAIECILLMMVSYGII 363 Query: 378 SIMIALFMNRLNAKIALKEK 397 S++IA M+++N +A+ E+ Sbjct: 364 SLIIAAIMDQINKHVAIVER 383 >gi|313680183|ref|YP_004057922.1| amino acid ABC transporter membrane protein 1, paat family [Oceanithermus profundus DSM 14977] gi|313152898|gb|ADR36749.1| amino acid ABC transporter membrane protein 1, PAAT family [Oceanithermus profundus DSM 14977] Length = 392 Score = 208 bits (530), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 136/356 (38%), Positives = 197/356 (55%), Gaps = 18/356 (5%) Query: 50 NNMEKSNLSLGIGFLSERAGFEIDQGIVP-----------YTSDSSYATAILVGFVNTFW 98 NM NL GFL+E A F+I +G Y A++ GF+NT Sbjct: 39 TNMAARNLQFSFGFLTEPADFQIYEGYTVAKEQGRWILRLYHPSDQVWQAMVTGFLNTLR 98 Query: 99 LAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPI 158 ++F G++ T++G L+G GRLS+N LV + YVE+ RN P LV + F Y +V +LP Sbjct: 99 VSFLGIVLTTVLGVLIGIGRLSSNWLVNRLSFAYVELIRNTPLLVQMVFWYLAVFLLLP- 157 Query: 159 PDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKA 218 P + G+ ++N+G+ P D F F G+ L + Sbjct: 158 PIRTAPRFHGVIVSNKGVLIPWPVPDAAWASFAPYFYAGLALWALLWLARSLWRPPRW-- 215 Query: 219 LPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTA 278 L +++ +GL L L+ L P + F GG +SPEF S+ +AL YTA Sbjct: 216 --LYWLTPAAAWGL-GLYLVG-SIPLELSVPQVQGFRVEGGMQLSPEFSSVLLALVLYTA 271 Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338 ++IAEIVR + ++P+GQ EA +LGL++ + RL++LPQAMR +IPPL +QYLNL KNS Sbjct: 272 SYIAEIVRGAIQSLPKGQWEAPASLGLSYAQTLRLIILPQAMRIVIPPLGNQYLNLTKNS 331 Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394 SLA+A+ F +++SV T +NQ G +IE ILI M YLSLS+ I+ +N N K+AL Sbjct: 332 SLAIAIAFPEIMSVYETTVNQAGHSIEGILIVMAAYLSLSLFISALINWYNVKVAL 387 >gi|148240912|ref|YP_001220413.1| amino acid ABC transporter permease protein precursor [Bradyrhizobium sp. BTAi1] gi|146411288|gb|ABQ39741.1| amino acid ABC transporter permease protein precursor [Bradyrhizobium sp. BTAi1] Length = 371 Score = 208 bits (529), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 134/381 (35%), Positives = 215/381 (56%), Gaps = 17/381 (4%) Query: 21 DMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYT 80 D R +I +Q +L + V + N++ + +G FLS + I + I+ Y Sbjct: 4 DARTRSIVIQCVLVAAVVGAAALLVTTTFTNLQTRGIPIGFDFLSMPSRIVISEAILSYK 63 Query: 81 SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140 S Y AI+VG NT +++ ++ ++++G +VG RLS+N L A CRV+VE+ RN P Sbjct: 64 SRDPYYWAIVVGLANTVFVSALVIVFSSVLGLVVGVTRLSSNPLAAGTCRVWVEIARNSP 123 Query: 141 PLVVIFFLYKSVLSVLP-IPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIV 199 P+V++ FLY VLP + D LP G+F + RGL P++ + V V G++ Sbjct: 124 PIVLLIFLYSLWWKVLPPVADALRPLP-GVFASMRGLMVPSVHISLATAGVVLIIVAGML 182 Query: 200 LSLFATRLS---RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256 A RL+ R+F P L +T + L L + D PV NF Sbjct: 183 F--LAPRLAGSLRNFR-------PALNWATVAVL---LLGLWFADATVSMDWPVFAGSNF 230 Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316 GG ++PE ++ I L+ YT FIAEIVR G+++V GQ +A ++GL+ K RL+++ Sbjct: 231 QGGLELTPELSTILIGLTIYTTGFIAEIVRGGVLSVGSGQWDAGRSVGLSRSKILRLIVI 290 Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376 PQ +R I+PPL SQY+N++KNS+LA+AVG+ D +V TII+++ +IE + I + +YL+ Sbjct: 291 PQMLRVIVPPLNSQYINVVKNSTLAIAVGYPDFFAVMNTIISKSSHSIEGVFIILGVYLA 350 Query: 377 LSIMIALFMNRLNAKIALKEK 397 L++ ++ N N +IA+ E+ Sbjct: 351 LNLTLSSAANWYNRRIAIVER 371 >gi|119489533|ref|ZP_01622294.1| ABC-type permease for basic amino acids and glutamine [Lyngbya sp. PCC 8106] gi|119454612|gb|EAW35759.1| ABC-type permease for basic amino acids and glutamine [Lyngbya sp. PCC 8106] Length = 388 Score = 207 bits (526), Expect = 3e-51, Method: Compositional matrix adjust. Identities = 138/381 (36%), Positives = 216/381 (56%), Gaps = 10/381 (2%) Query: 21 DMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSL-GIGFLSERAGFEIDQGIVPY 79 D R I+ Q+++ + + +F+ N+ N++++ ++ FL+ AGF I + ++PY Sbjct: 14 DSRFWKIAFQLVILIAVLSLFILLGTNLTRNLQQTGGTVFNFDFLNSTAGFGIGESLIPY 73 Query: 80 TSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNI 139 + +Y+ +L G +N+ + G+I TI+G L G S N L+ I YVE+ RN Sbjct: 74 QATDNYSRVLLAGLLNSLRVMVLGIILTTILGVLAGVIYFSNNWLLRQITIYYVEIVRNT 133 Query: 140 PPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL-GI 198 P L+ + F Y L LP + L ++LN RG+ P NA F + +L Sbjct: 134 PLLLQLLFWYGLFLQ-LPAIATTAKLFNAIYLNKRGVFLPW--PSGNAVWFWLAVLLIAA 190 Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ--FNF 256 + S+ R + GK+ I +++ L LV+I + L + +P+ + Sbjct: 191 IASVVIWRWRIKIMVEQGKSGQPQLIILWIMGILAGLVII---FALGWQRPIPAENGRTI 247 Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316 GG ++ EF +L + L YT A+IAEIVRSG+ +VP+GQ EAA +LGL RLV+ Sbjct: 248 EGGLRMTIEFTALLVGLVVYTGAYIAEIVRSGIQSVPKGQWEAARSLGLKPGLVMRLVVF 307 Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376 PQA+R IIPPL SQYLNL KNSSLA+AV + D+ SV T NQ+G+ +E++LI M YLS Sbjct: 308 PQALRVIIPPLNSQYLNLAKNSSLAIAVAYPDIYSVANTTFNQSGRVVEVMLIIMATYLS 367 Query: 377 LSIMIALFMNRLNAKIALKEK 397 ++++I+L MN LN + L+E+ Sbjct: 368 INLLISLTMNGLNKAVQLRER 388 >gi|282899900|ref|ZP_06307861.1| Amino acid ABC transporter, permease protein, 3- TM region protein, His/Glu/Gln/Arg/opine [Cylindrospermopsis raciborskii CS-505] gi|281195170|gb|EFA70106.1| Amino acid ABC transporter, permease protein, 3- TM region protein, His/Glu/Gln/Arg/opine [Cylindrospermopsis raciborskii CS-505] Length = 313 Score = 206 bits (523), Expect = 7e-51, Method: Compositional matrix adjust. Identities = 133/360 (36%), Positives = 191/360 (53%), Gaps = 76/360 (21%) Query: 38 TVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTF 97 TV LW NN +N+ + +SLG FL +A F+I + +V Y + SY A+ VG VN+ Sbjct: 30 TVNILW--NNANHNLRQLGISLGWDFLERQASFDIGESLVKYDATDSYGRALGVGLVNSL 87 Query: 98 WLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLP 157 +A G++ AT++G G GRLS N LV I VYVE+FRN P L+ + F Y Sbjct: 88 RVATLGILFATVVGITAGIGRLSDNWLVRNISLVYVEIFRNTPLLLQLLFWY-------- 139 Query: 158 IPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGK 217 FG+FL S P KI +F + + G Sbjct: 140 ---------FGVFL-----SLP----RPENKISLFGL---------------GYLSQNGI 166 Query: 218 ALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT 277 LP L YQ G ++PEF +L + L+ YT Sbjct: 167 DLP------------------TLTYQ---------------GVNLTPEFSTLLLGLTFYT 193 Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 AFIAEIVR+G+ +V +GQ EA ++LGL RL++ PQA++ I+PPLTSQYLNL+KN Sbjct: 194 GAFIAEIVRAGIKSVSQGQREAGLSLGLRPGLLMRLIIFPQALKLIVPPLTSQYLNLMKN 253 Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 SSLA+A+G+ D+ V T NQTG+A+E++++ M YL+LS+ I++ MN +N + +KE+ Sbjct: 254 SSLAIAIGYPDIYFVASTTFNQTGKAVEVMILLMITYLTLSLTISIVMNLVNRTVQIKER 313 >gi|148555538|ref|YP_001263120.1| binding-protein-dependent transport systems inner membrane component [Sphingomonas wittichii RW1] gi|148500728|gb|ABQ68982.1| binding-protein-dependent transport systems inner membrane component [Sphingomonas wittichii RW1] Length = 374 Score = 204 bits (520), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 127/348 (36%), Positives = 197/348 (56%), Gaps = 11/348 (3%) Query: 46 NNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMI 105 V +NME+ ++ L +GFL A F I + + Y + A A +VG N+ L ++ Sbjct: 32 RTVSDNMERQDMVLSLGFLRSTAEFPIAESFLAYAPGDTIAWAFVVGLGNSIALTLLIIV 91 Query: 106 PATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVL 165 +T+ G + R S + L + +V++ RN+P +V + F Y +L P P + Sbjct: 92 LSTMAGVPIALARHSGHMLARTLAGGFVDLVRNVPLVVQLLFWYGVILMAFP-PARAAAQ 150 Query: 166 PF-GMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224 P G+FL NRG++ T+ + A + + + G+ L+L T H H+ + L + Sbjct: 151 PLPGLFLTNRGITVTTVGITGTALPMIVTVLGGLTLTLI-TAWRGHLHKASLCTLGTIVA 209 Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284 + L I L L D P +FNF GG T++PEF+++ Y +AF AEI Sbjct: 210 GSAL--------WIVLDLGLARDVPHFDRFNFTGGLTLTPEFVAVLWGSVIYASAFAAEI 261 Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344 VR GL VPRGQ EA+ ALGL+ R++ RLV++PQA+R I+PP+ SQ++ +LKNS+LA+ V Sbjct: 262 VRGGLDGVPRGQWEASRALGLSKRQSLRLVIVPQALRMIVPPMNSQFITILKNSTLALVV 321 Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 G+ DL V T IN TGQ +E + I M ++ +L+ I+L MNRLNA++ Sbjct: 322 GYPDLNFVANTAINHTGQGLEGVAILMLVFFTLASAISLAMNRLNARV 369 >gi|309785600|ref|ZP_07680231.1| general L-amino acid transport system permease protein aapQ [Shigella dysenteriae 1617] gi|308926720|gb|EFP72196.1| general L-amino acid transport system permease protein aapQ [Shigella dysenteriae 1617] Length = 236 Score = 204 bits (518), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 112/229 (48%), Positives = 153/229 (66%), Gaps = 1/229 (0%) Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229 FL+NRGL P+ + F+ + V+ IVLS+ R ++ + KTG+ I+ LI Sbjct: 8 FLSNRGLYIPSPQLGDGFIAFILAVVMAIVLSVGLFRFNKTYQIKTGQLRRTWPIAAVLI 67 Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289 GLP L LH+D P L FNF GG + PE +L +ALS YT+AFIAEI+R+G+ Sbjct: 68 IGLPLLAQWLFGAALHWDVPALQGFNFRGGMVLIPELAALTLALSVYTSAFIAEIIRAGI 127 Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349 AVP GQ EAA +LGL + R V++PQA+R IIPPLTSQYLN++KNSSLA A+G+ D+ Sbjct: 128 QAVPYGQHEAARSLGLPNPVTLRQVIIPQALRVIIPPLTSQYLNIVKNSSLAAAIGYPDM 187 Query: 350 VSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 VS+ GT++NQTGQAIE I + M +YL +S+ I+L MN N +IA+ E+ Sbjct: 188 VSLFAGTVLNQTGQAIETIAMTMSVYLIISLTISLLMNIYNRRIAIVER 236 >gi|81299058|ref|YP_399266.1| ABC-type permease for basic amino acids and glutamine [Synechococcus elongatus PCC 7942] gi|81167939|gb|ABB56279.1| ABC-type permease for basic amino acids and glutamine [Synechococcus elongatus PCC 7942] Length = 377 Score = 203 bits (516), Expect = 4e-50, Method: Compositional matrix adjust. Identities = 133/375 (35%), Positives = 209/375 (55%), Gaps = 14/375 (3%) Query: 18 FLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIV 77 F D R+ Q+++ L++ + +W V+N+ N+ + LSL +L + AGF I + + Sbjct: 11 FWRDERLWRWVWQLLVLLVVGLGAIWLVDNLVYNLSQRGLSLSFDWLDQSAGFNIGESAI 70 Query: 78 PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137 Y + SYA A++VG VN+ + G+I T+IGTL G S N L+ + R YV V R Sbjct: 71 AYRTADSYARALVVGLVNSLRVIAIGLILTTVIGTLAGVAAFSENWLLRQLSRGYVAVVR 130 Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLG 197 N P L+ + Y +L LP ++L+ +G+ P T + V +L Sbjct: 131 NTPLLLQLIVWYFPILLSLPAAQQPWHWLGSLYLSKQGIYLPW--PQTPGWLVV---ILA 185 Query: 198 IVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFI 257 I L LF + L++ +++ + LY + ++ L L ++ QL +P GQ Sbjct: 186 IALVLFVSWLAQR--QRSPRDWRWLYGAIAVVTVLMLLTQLSWPQQL---QP--GQIR-- 236 Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317 GG +S EF +L + L YT AFI EI+R G+++VP GQ EAA ALGLT + +++P Sbjct: 237 GGLRLSLEFTALLLGLVAYTGAFITEIIRGGILSVPAGQWEAAAALGLTRSQTLWQIVVP 296 Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377 QA+R I+P L SQY+ KNSSLA+AVG+ DL + T +NQTG+ +E+ LI M YL++ Sbjct: 297 QALRVIVPSLNSQYVGFAKNSSLAIAVGYPDLYATAQTTLNQTGRPVEVFLILMLTYLAI 356 Query: 378 SIMIALFMNRLNAKI 392 + +I+ MN L ++ Sbjct: 357 NAVISAGMNGLQQRL 371 >gi|56751275|ref|YP_171976.1| basic amino acids and glutamine ABC transporter permease [Synechococcus elongatus PCC 6301] gi|56686234|dbj|BAD79456.1| ABC-type permease for basic amino acids and glutamine [Synechococcus elongatus PCC 6301] Length = 379 Score = 203 bits (516), Expect = 4e-50, Method: Compositional matrix adjust. Identities = 133/375 (35%), Positives = 209/375 (55%), Gaps = 14/375 (3%) Query: 18 FLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIV 77 F D R+ Q+++ L++ + +W V+N+ N+ + LSL +L + AGF I + + Sbjct: 13 FWRDERLWRWVWQLLVLLVVGLGAIWLVDNLVYNLSQRGLSLSFDWLDQSAGFNIGESAI 72 Query: 78 PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137 Y + SYA A++VG VN+ + G+I T+IGTL G S N L+ + R YV V R Sbjct: 73 AYRTADSYARALVVGLVNSLRVIAIGLILTTVIGTLAGVAAFSENWLLRQLSRGYVAVVR 132 Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLG 197 N P L+ + Y +L LP ++L+ +G+ P T + V +L Sbjct: 133 NTPLLLQLIVWYFPILLSLPAAQQPWHWLGSLYLSKQGIYLPW--PQTPGWLVV---ILA 187 Query: 198 IVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFI 257 I L LF + L++ +++ + LY + ++ L L ++ QL +P GQ Sbjct: 188 IALVLFVSWLAQR--QRSPRDWRWLYGAIAVVTVLMLLTQLSWPQQL---QP--GQIR-- 238 Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317 GG +S EF +L + L YT AFI EI+R G+++VP GQ EAA ALGLT + +++P Sbjct: 239 GGLRLSLEFTALLLGLVAYTGAFITEIIRGGILSVPAGQWEAAAALGLTRSQTLWQIVVP 298 Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377 QA+R I+P L SQY+ KNSSLA+AVG+ DL + T +NQTG+ +E+ LI M YL++ Sbjct: 299 QALRVIVPSLNSQYVGFAKNSSLAIAVGYPDLYATAQTTLNQTGRPVEVFLILMLTYLAI 358 Query: 378 SIMIALFMNRLNAKI 392 + +I+ MN L ++ Sbjct: 359 NAVISAGMNGLQQRL 373 >gi|323154324|gb|EFZ40526.1| general L-amino acid transport system permease aapQ domain protein [Escherichia coli EPECa14] Length = 247 Score = 203 bits (516), Expect = 5e-50, Method: Compositional matrix adjust. Identities = 114/243 (46%), Positives = 158/243 (65%), Gaps = 1/243 (0%) Query: 156 LPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKT 215 LP P ++ FL+NRGL P+ + F+ + V+ I+LS+ R ++ + KT Sbjct: 5 LPGPRQAVSAFDLAFLSNRGLYIPSPQLGDGFIAFILAVVMAIILSVGLFRFNKTYQIKT 64 Query: 216 GKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSC 275 G+ I+ LI GLP L LH+D P L FNF GG + PE +L +ALS Sbjct: 65 GQLRRTWPIAAVLIIGLPLLAQWLFGAALHWDVPALRGFNFRGGMVLIPELAALTLALSV 124 Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335 YT+AFIAEI+R+G+ AVP GQ EAA +LGL + R V++PQA+R IIPPLTSQYLN++ Sbjct: 125 YTSAFIAEIIRAGIQAVPYGQHEAARSLGLPNPVTLRQVIIPQALRVIIPPLTSQYLNIV 184 Query: 336 KNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394 KNSSLA A+G+ D+VS+ GT++NQTGQAIE I + M +YL +S+ I+L MN N +IA+ Sbjct: 185 KNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAMTMSVYLIISLTISLLMNIYNRRIAI 244 Query: 395 KEK 397 E+ Sbjct: 245 VER 247 >gi|160899042|ref|YP_001564624.1| polar amino acid ABC transporter inner membrane protein [Delftia acidovorans SPH-1] gi|160364626|gb|ABX36239.1| polar amino acid ABC transporter, inner membrane subunit [Delftia acidovorans SPH-1] Length = 349 Score = 201 bits (511), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 127/350 (36%), Positives = 182/350 (52%), Gaps = 59/350 (16%) Query: 46 NNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMI 105 +N NM ++ G GFL + AGF I +G++PY SY A+ G NT A + Sbjct: 53 HNASRNMAARGIAGGFGFLEQTAGFSISEGLLPYEPGDSYLRAVAAGVANTVRAAVPALA 112 Query: 106 PATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVL 165 AT++G L+G ++ + L+ R+YV+V RNIP LV + Y ++ S+LP DH + + Sbjct: 113 LATMLGLLLGVAAVARHPLLRGAVRLYVDVARNIPLLVQVLLWYFALTSLLPDVDHPLAI 172 Query: 166 -PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALP-LLY 223 P G F K G ALP +Y Sbjct: 173 GPLG------------------------------------------FLSKAGLALPGPVY 190 Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283 S H+ P G F+ GG ++PEF++L AL Y AA+ AE Sbjct: 191 DSA---------------AGWHWSSPQPGMFSIDGGLALTPEFLALVGALGLYAAAYCAE 235 Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343 IVR+GL AVPRGQ AA ALG+ + RLV+LPQA+R IIPP T+ L+ +KNSSLAVA Sbjct: 236 IVRAGLQAVPRGQWNAASALGMRRGQQLRLVVLPQALRVIIPPYTNLALSTIKNSSLAVA 295 Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393 +G+ D+V V T ++QTGQAIE + I +YL+++++ +L +N N + A Sbjct: 296 IGYPDVVMVANTAMSQTGQAIECVTIIAVVYLAINLLTSLALNAFNQRSA 345 >gi|282897629|ref|ZP_06305629.1| Amino acid ABC transporter, permease protein, 3- TM region protein, His/Glu/Gln/Arg/opine [Raphidiopsis brookii D9] gi|281197552|gb|EFA72448.1| Amino acid ABC transporter, permease protein, 3- TM region protein, His/Glu/Gln/Arg/opine [Raphidiopsis brookii D9] Length = 313 Score = 200 bits (508), Expect = 4e-49, Method: Compositional matrix adjust. Identities = 135/379 (35%), Positives = 200/379 (52%), Gaps = 78/379 (20%) Query: 21 DMRVHNISVQI--ILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVP 78 + R I++Q+ IL L V LW NN +N+ + +S G FL ++A F+I + +V Sbjct: 11 NYRFWQIAIQVVAILMALGIVNILW--NNANHNLRQLGISFGWDFLGQQASFDIGESLVK 68 Query: 79 YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138 Y + SY A+ VG VN+ +A G++ AT++G G GRLS N LV I VYVE+FRN Sbjct: 69 YDATESYGRALAVGLVNSLRVATLGILLATVVGITAGIGRLSDNWLVRNISLVYVEIFRN 128 Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198 P L+ + F Y FG+FL S P KI +F Sbjct: 129 TPLLLQLLFWY-----------------FGVFL-----SLP----KPENKISLFGL---- 158 Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258 + + G LP L YQ Sbjct: 159 -----------GYLSQNGIDLP------------------TLTYQ--------------- 174 Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G ++PEF +L + L+ YT AF+AEIVR+G+ +V +GQ +A ++LGL RL++ PQ Sbjct: 175 GVNLTPEFCTLLLGLTFYTGAFVAEIVRAGIKSVSQGQWDAGLSLGLRSGLLMRLIIFPQ 234 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378 A++ I+PPLTSQYLNL+KNSSLA+A+G+ D+ V T NQTG+A+E++++ M YL+LS Sbjct: 235 ALKLIVPPLTSQYLNLMKNSSLAIAIGYPDMYFVASTTFNQTGKAVEVMVLLMITYLTLS 294 Query: 379 IMIALFMNRLNAKIALKEK 397 + I++ MN +N + +KE+ Sbjct: 295 LTISIVMNLINRTVQIKER 313 >gi|39935695|ref|NP_947971.1| polar amino acid ABC transpor permease AapQ-2 [Rhodopseudomonas palustris CGA009] gi|39649548|emb|CAE28070.1| polar amino acid ABC transpor permease protein, aapQ-2 [Rhodopseudomonas palustris CGA009] Length = 389 Score = 199 bits (506), Expect = 6e-49, Method: Compositional matrix adjust. Identities = 126/353 (35%), Positives = 212/353 (60%), Gaps = 7/353 (1%) Query: 46 NNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMI 105 +N+ M + L+ G GFL A FEI + +P+ + SYA AI VG +NT +A I Sbjct: 42 SNIAATMARIGLTPGFGFLERAAKFEIGESTIPFRAGDSYARAIAVGVLNTAKVAVVSCI 101 Query: 106 PATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVL 165 AT++G + RL+ + +++ + R +EV RN P L+ +FF + ++ LP P ++V Sbjct: 102 LATVLGVALALMRLAGHPVLSGLVRWSIEVVRNTPLLLQLFF-WIALAHALPPPRRAVVW 160 Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225 +FL NRG+ P++ + + + + + + I+L A + +T L L + Sbjct: 161 FDCVFLTNRGVYLPSVIIAEGSWMAI-TAIAAILLGWLAL----LWRSRTRGPLSPLPLG 215 Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285 I L +V+ A +++ PV+ FN GG++++PEF +L + L+ AA AEIV Sbjct: 216 LVAILAL-AVVIYASGFRISLHSPVVQGFNIQGGTSLTPEFAALLVGLTVKFAAIFAEIV 274 Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345 R+G+++V R Q +AA ALGL+ + RLV+LPQA+R I P TS YL+++K+SSLAVA+G Sbjct: 275 RAGILSVRREQWDAARALGLSEFQIVRLVVLPQALRVITPLATSCYLDVIKDSSLAVAIG 334 Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 + DL+++ T N TGQA+E +LI + +YL+L++ ++ MN NA++A++ + Sbjct: 335 YPDLMNITNTTANTTGQALETLLIVVALYLTLNLSVSAVMNVYNARVAMRGGR 387 >gi|192291278|ref|YP_001991883.1| ABC transporter inner membrane protein [Rhodopseudomonas palustris TIE-1] gi|192285027|gb|ACF01408.1| binding-protein-dependent transport systems inner membrane component [Rhodopseudomonas palustris TIE-1] Length = 389 Score = 194 bits (493), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 124/353 (35%), Positives = 210/353 (59%), Gaps = 7/353 (1%) Query: 46 NNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMI 105 +N+ M + L+ G GFL A FEI + + + + SYA AI VG +NT +A I Sbjct: 42 SNIAATMARIGLTPGFGFLERAANFEIGESTISFRAGDSYARAIAVGVLNTAKVAVLSCI 101 Query: 106 PATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVL 165 AT++G + RL+ + +++ + R +EV RN P L+ +FF + ++ LP P ++V Sbjct: 102 LATVLGVALALLRLAGHPVLSGLVRWSIEVVRNTPLLLQLFF-WIALAHALPPPRRAVVW 160 Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225 +FL NRG+ P++ + + + + + + I+L A L R LPL ++ Sbjct: 161 FDCVFLTNRGVYLPSVIIAEGSWMAI-TAIAAILLGWLAL-LWRSRKRGPLAPLPLGLVA 218 Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285 + +V+ A +++ P + FN GG++++PEF +L + L+ AA AEIV Sbjct: 219 ILAL----AVVIYASGFRISLHSPAVQGFNIQGGTSLTPEFAALLVGLTVKFAAIFAEIV 274 Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345 R+G+++V R Q +AA ALGL+ + RLV+LPQA+R I P TS YL+++K+SSLAVA+G Sbjct: 275 RAGILSVRREQWDAARALGLSEFQIVRLVVLPQALRVITPLATSCYLDVIKDSSLAVAIG 334 Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 + DL+++ T N TGQA+E +LI + +YL+L++ ++ MN NA++A++ + Sbjct: 335 YPDLMNITNTTANTTGQALETLLIVVALYLTLNLSVSAVMNVYNARVAMRGGR 387 >gi|103487894|ref|YP_617455.1| amino acid ABC transporter permease [Sphingopyxis alaskensis RB2256] gi|98977971|gb|ABF54122.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Sphingopyxis alaskensis RB2256] Length = 730 Score = 193 bits (490), Expect = 5e-47, Method: Compositional matrix adjust. Identities = 122/316 (38%), Positives = 185/316 (58%), Gaps = 16/316 (5%) Query: 50 NNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATI 109 +N+ N+ G GFL +RAGF I + ++ Y SYA A+ VG +NT ++ G+I +T+ Sbjct: 34 DNLADRNIRTGFGFLFDRAGFAIGETLIAYAPGDSYAAALAVGLLNTLLISALGIIFSTL 93 Query: 110 IGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGM 169 +G V RLS+N L+A + +Y+E+ RNIP L+ +F Y ++L LP P V PF Sbjct: 94 LGLAVCMARLSSNWLLARLSGLYIELVRNIPLLLQMFVWYAALLFGLPGPGPGAVGPFD- 152 Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229 L+NRGL P L++ + + ++ + L A R +T A + + L+ Sbjct: 153 -LDNRGLHLPALSLADPGRPVLLIAIVACAILLGAVRRG-AVRTRTALAFAGISLVPLLL 210 Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289 +G D P G+F +GG + S EF++L +LS Y +A++AEI R + Sbjct: 211 WG-------------GIDLPRAGRFGTVGGLSFSTEFLTLVTSLSVYASAYLAEIFRGAI 257 Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349 +AVP GQ EAA ALGL+ + +++PQA+R IPP+TS +LN +KNSSL VA+G+ + Sbjct: 258 LAVPAGQSEAAKALGLSPAQTMGRIVIPQALRIAIPPMTSWHLNTIKNSSLGVAIGYPEF 317 Query: 350 VSVGGTIINQTGQAIE 365 VSV T+I+QTGQAIE Sbjct: 318 VSVVDTVISQTGQAIE 333 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 39/81 (48%), Positives = 59/81 (72%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +AL +TAA++AE++R GL+AVP GQ EAA ALGLT +A R +LLPQA++ +P L + Sbjct: 602 LALIFFTAAYMAEVIRGGLLAVPVGQAEAAHALGLTKWQARRHILLPQALKVSVPGLVNT 661 Query: 331 YLNLLKNSSLAVAVGFADLVS 351 ++ +KN++L + VG DL+ Sbjct: 662 SISEVKNTTLVLIVGVFDLLQ 682 >gi|297518685|ref|ZP_06937071.1| predicted amino-acid transporter subunit [Escherichia coli OP50] Length = 208 Score = 189 bits (481), Expect = 5e-46, Method: Compositional matrix adjust. Identities = 104/206 (50%), Positives = 141/206 (68%), Gaps = 1/206 (0%) Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249 F+ + V+ IVLS+ R ++ + KTG+ I+ LI GLP L LH+D P Sbjct: 2 FILAVVMAIVLSVGLFRFNKTYQIKTGQLRRTWPIAAVLIIGLPLLAQWLFGAALHWDVP 61 Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309 L FNF GG + PE +L +ALS YT+AFIAEI+R+G+ AVP GQ EAA +LGL + Sbjct: 62 ALRGFNFRGGMVLIPELAALTLALSVYTSAFIAEIIRAGIQAVPYGQHEAARSLGLPNPV 121 Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIIL 368 R V++PQA+R IIPPLTSQYLN++KNSSLA A+G+ D+VS+ GT++NQTGQAIE I Sbjct: 122 TLRQVIIPQALRVIIPPLTSQYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIA 181 Query: 369 IWMFIYLSLSIMIALFMNRLNAKIAL 394 + M +YL +S+ I+L MN N +IA+ Sbjct: 182 MTMSVYLIISLTISLLMNIYNRRIAI 207 >gi|312115907|ref|YP_004013503.1| polar amino acid ABC transporter inner membrane protein [Rhodomicrobium vannielii ATCC 17100] gi|311221036|gb|ADP72404.1| polar amino acid ABC transporter, inner membrane subunit [Rhodomicrobium vannielii ATCC 17100] Length = 357 Score = 188 bits (477), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 144/351 (41%), Positives = 206/351 (58%), Gaps = 22/351 (6%) Query: 43 WCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFS 102 W V + N+ + + G+GFLSE AGF + Q ++P+ S+Y A +VG +NT +A Sbjct: 26 WLVFTAWTNIGRLPVHFGLGFLSEPAGFSVLQTLIPFDEKSTYGRAFMVGLLNTLLVAAI 85 Query: 103 GMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHS 162 G+ AT+IG VG RL+ N+L+ + YVE+FRN+P L+++FF Y VL LP P S Sbjct: 86 GIALATVIGFSVGVARLAPNRLLRAVAAGYVELFRNLPLLLLLFFFYFGVLRQLPPPRQS 145 Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222 L G+ LNNRGL P D ++ L ++ + A + G Sbjct: 146 FELG-GVILNNRGLFLP----DPAGGGWLVLAALALLAAALALKSRWRIFAGVGA----- 195 Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282 + L++ H P + GG + PEF++L AL+ YTAA+IA Sbjct: 196 -----------AVALVSALAMTHIVWPEARGLSVSGGLRLIPEFVALVAALAIYTAAYIA 244 Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342 EIVR+G+ +V RGQ +AA ALGLT +A R V+LPQA+R ++PPLTSQYLNL KNSSLAV Sbjct: 245 EIVRAGIQSVARGQGQAAAALGLTGLQAMRFVVLPQALRLVVPPLTSQYLNLTKNSSLAV 304 Query: 343 AVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 A+ + DLVS+ GT + QTGQA+EI+ + M +YL+LS+ A +N NA++ Sbjct: 305 AIAYPDLVSIFAGTTLAQTGQAVEIMALTMGVYLTLSLATAALLNWQNARV 355 >gi|152998089|ref|YP_001342924.1| binding-protein-dependent transporter inner membrane component [Marinomonas sp. MWYL1] gi|150839013|gb|ABR72989.1| binding-protein-dependent transport systems inner membrane component [Marinomonas sp. MWYL1] Length = 401 Score = 187 bits (476), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 132/385 (34%), Positives = 210/385 (54%), Gaps = 14/385 (3%) Query: 17 KFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGI 76 FLY+ +V + +Q+I ++ + N NM + L+ G FL +RAG++I + Sbjct: 27 SFLYNRKVRDTLIQLIFFAVICFGITYLALNAATNMRDAGLTSGFDFLFQRAGYDISYSL 86 Query: 77 VPYT-SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEV 135 + Y S++ A G VNT A ++ T++ + RLS N L++ + VE Sbjct: 87 IHYDPKTSTHLMAWAAGMVNTIAFAVVAILLTTVMALCLAVMRLSQNFLLSKVSLCLVEY 146 Query: 136 FRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFG--MFLNNRGLSFPTLTMDTNAKIFVFS 193 RN+P LV I Y LS++ +P FG FL+NRGLS P++ + + Sbjct: 147 VRNVPILVHISVWYT--LSLM-LPSVRQAFNFGDVSFLSNRGLSIPSVEWNYGLLASLVF 203 Query: 194 FVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ 253 L VL F + TG+ + + + T ++ L +LV + + F P L Sbjct: 204 AALWTVLCFFVKKRV----STTGRRIISVLLMTIVLAVLASLVFTPV---ISFTAPKLVG 256 Query: 254 FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313 FNF G T+ PEF+ L IA+S Y+AA +E++R ++A+ +GQMEA +ALG+ Sbjct: 257 FNFKHGWTLPPEFIMLIIAVSTYSAAHGSEVIRGSILAISKGQMEAGLALGVRPNIVMNK 316 Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV-SVGGTIINQTGQAIEIILIWMF 372 V++PQA+ SIIPP+TS Y+N+LK ++L VGF D++ ++GG+ +N TGQAIE I+I M Sbjct: 317 VIIPQALHSIIPPMTSIYINVLKAAALGSVVGFMDIMGTMGGSSLNITGQAIECIVIVMV 376 Query: 373 IYLSLSIMIALFMNRLNAKIALKEK 397 Y L++++A M R N + LK + Sbjct: 377 SYGILNLILAAIMGRFNKAMQLKGR 401 >gi|331670095|ref|ZP_08370940.1| putative amino-acid ABC transporter permease protein YhdX [Escherichia coli TA271] gi|331063008|gb|EGI34922.1| putative amino-acid ABC transporter permease protein YhdX [Escherichia coli TA271] Length = 203 Score = 187 bits (476), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 103/203 (50%), Positives = 139/203 (68%), Gaps = 1/203 (0%) Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFN 255 + IVLS+ R ++ + KTG+ I+ LI GLP L LH+D P L FN Sbjct: 1 MAIVLSVGLFRFNKTYQIKTGQLRRTWPIAAVLIIGLPLLAQWLFGAALHWDVPALRGFN 60 Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315 F GG + PE +L +ALS YT+AFIAEI+R+G+ AVP GQ EAA +LGL + R V+ Sbjct: 61 FRGGMVLIPELAALTLALSVYTSAFIAEIIRAGIQAVPYGQHEAARSLGLPNPVTLRQVI 120 Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIY 374 +PQA+R IIPPLTSQYLN++KNSSLA A+G+ D+VS+ GT++NQTGQAIE I + M +Y Sbjct: 121 IPQALRVIIPPLTSQYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAMTMSVY 180 Query: 375 LSLSIMIALFMNRLNAKIALKEK 397 L +S+ I+L MN N +IA+ E+ Sbjct: 181 LIISLTISLLMNIYNRRIAIVER 203 >gi|313648622|gb|EFS13063.1| general L-amino acid transport system permease aapQ domain protein [Shigella flexneri 2a str. 2457T] Length = 203 Score = 185 bits (470), Expect = 9e-45, Method: Compositional matrix adjust. Identities = 102/203 (50%), Positives = 138/203 (67%), Gaps = 1/203 (0%) Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFN 255 + IVLS+ R ++ + KTG+ I+ LI GLP L LH+D P L FN Sbjct: 1 MAIVLSVGLFRFNKTYQIKTGQLRRSWPIAAVLIIGLPLLAQWLFGAALHWDVPALQGFN 60 Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315 F GG + PE +L +ALS YT+AFIAEI+R+G+ AVP GQ EAA +LGL + R V+ Sbjct: 61 FRGGMVLIPELAALTLALSVYTSAFIAEIIRAGIQAVPYGQHEAARSLGLPNPVTLRQVI 120 Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIY 374 +PQA+R IIPPLTSQYLN++KNSSLA +G+ D+VS+ GT++NQTGQAIE I + M +Y Sbjct: 121 IPQALRVIIPPLTSQYLNIVKNSSLAAVIGYPDMVSLFAGTVLNQTGQAIETIAMTMSVY 180 Query: 375 LSLSIMIALFMNRLNAKIALKEK 397 L +S+ I+L MN N +IA+ E+ Sbjct: 181 LIISLTISLLMNIYNRRIAIVER 203 >gi|323165233|gb|EFZ51023.1| general L-amino acid transport system permease protein aapQ [Shigella sonnei 53G] Length = 307 Score = 184 bits (468), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 107/278 (38%), Positives = 158/278 (56%) Query: 30 QIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAI 89 QI+ + + I W +N N+ ++ G FL AGF I Q ++ Y +Y Sbjct: 25 QILAVVAVVGIVGWLFHNTVTNLNNRGITSGFAFLDRGAGFGIVQHLIDYQQGDTYGRVF 84 Query: 90 LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 +VG +NT ++ ++ A+++G +G RLS N L+ + +Y+E+FRNIPPL+ IFF Y Sbjct: 85 IVGLLNTLLVSALCIVFASVLGFFIGLARLSDNWLLRKLSTIYIEIFRNIPPLLQIFFWY 144 Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209 +VL LP P ++ FL+NRGL P+ + F+ + V+ IVLS+ R ++ Sbjct: 145 FAVLRNLPGPRQAVSAFDLAFLSNRGLYIPSPQLGDGFIAFILAVVMAIVLSVGLFRFNK 204 Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269 + KTG+ I+ LI GLP L LH+D P L FNF GG + PE +L Sbjct: 205 TYQIKTGQLRRTWPIAAVLIIGLPLLAQWLFGAALHWDVPALRGFNFRGGMVLIPELAAL 264 Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307 +ALS YT+AFIAEI+R+G+ AVP GQ EAA +LGL + Sbjct: 265 TLALSVYTSAFIAEIIRAGIQAVPYGQHEAARSLGLPN 302 >gi|87302593|ref|ZP_01085410.1| ABC-type permease for basic amino acids and glutamine [Synechococcus sp. WH 5701] gi|87282937|gb|EAQ74894.1| ABC-type permease for basic amino acids and glutamine [Synechococcus sp. WH 5701] Length = 329 Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 122/352 (34%), Positives = 182/352 (51%), Gaps = 60/352 (17%) Query: 46 NNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMI 105 N+ N+ + L L +LS+ A F++ + ++P+ + Y A+LVG VN+ + G++ Sbjct: 38 GNLVRNLTAAGLLLSWRWLSQPASFDVAESLIPFDASMPYWRALLVGLVNSLRVILVGLV 97 Query: 106 PATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVL 165 AT++GT +G S N L+ + RVYVEV RNIP L+ + F Y V LP + L Sbjct: 98 GATLLGTAMGMASFSGNGLLRRLARVYVEVIRNIPLLLQLLFWYFVVFLALPNGTAAFQL 157 Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225 P GIVLS K+G LY++ Sbjct: 158 P------------------------------GIVLS------------KSG-----LYLA 170 Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285 F + P L + +S EF +L L YT AF+AE+V Sbjct: 171 WF-------------AQGFSWQGPELVNGVWRAPLRLSVEFTALLTGLITYTGAFVAEVV 217 Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345 R G+ +VP+GQ EAA +LGL + R V+LPQA+R I+P L SQY++L KNSSLAVAVG Sbjct: 218 RGGIASVPKGQWEAATSLGLHWSASMRSVVLPQALRVIVPGLNSQYISLAKNSSLAVAVG 277 Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 + DL SV T +NQTG+A+E+ L+ + YL + ++I+ MN +N + ++E+ Sbjct: 278 YVDLYSVSETTLNQTGRALEVFLLLLGSYLIIDLLISAVMNGVNQLVQIRER 329 >gi|319782290|ref|YP_004141766.1| binding-protein-dependent transport systems inner membrane component [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317168178|gb|ADV11716.1| binding-protein-dependent transport systems inner membrane component [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 387 Score = 183 bits (465), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 124/386 (32%), Positives = 210/386 (54%), Gaps = 6/386 (1%) Query: 16 MKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQG 75 + L + +V N +Q++ + + L + N+ ++ G FL + G++++ Sbjct: 2 VSLLRNQKVRNALLQVLYVGSIAAMVLAGIVIARRNLADQGITSGFDFLFKSTGWDVNFS 61 Query: 76 IVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEV 135 ++P T++ Y L+G +NT +L G+I ATI+GT+VG R S+N L + R YV++ Sbjct: 62 LLPATANDPYWWYFLIGIINTLFLGSVGLILATIVGTIVGLARTSSNDLARLLGRTYVDI 121 Query: 136 FRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFV 195 FRNIP ++ +FF Y ++++ LP P S +G L +RGL P + + A V Sbjct: 122 FRNIPLILQVFFWY-AIITHLPTP-RSAHEAWGFLLTSRGLYIPFPNVGSAAFAAATVAV 179 Query: 196 LGIV-LSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLI--ALKYQLHFDKPVLG 252 + + L + R S + G+ + + + T++L L D P L Sbjct: 180 IAAIVLPAWLGRTS-LLAQPIGQRRTIQFAAAAAALACATIILALGRLPDTPLLDFPALQ 238 Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312 N GG + PEF +L IA++ Y ++IAEIVR G +V GQ+EAA++LGL+ + Sbjct: 239 GLNLRGGLRIPPEFATLAIAIAIYGGSYIAEIVRGGFKSVGTGQVEAALSLGLSPWRVFT 298 Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372 LV LP A+R+++P L +QY+ L+K +++ +AVGF D + IN +GQ +E I I M Sbjct: 299 LVRLPLALRAMLPILANQYVWLMKATTMGIAVGFTDFFMIVALTINHSGQTLEAIGILMA 358 Query: 373 IYLSLSIMIALFMNRLNAKIALKEKK 398 +L++++ +A NR+N IALK + Sbjct: 359 GFLAINLSLAAVFNRINKAIALKGNQ 384 >gi|218677586|ref|ZP_03525483.1| general L-amino acid ABC transporter, permease protein [Rhizobium etli CIAT 894] Length = 261 Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 103/240 (42%), Positives = 143/240 (59%) Query: 13 FSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEI 72 +S LYD + I QI+ +LL W +N N+ ++N++ G GFL+ RAGFE+ Sbjct: 22 WSFQSALYDPTIRGIFFQILTIVLLVAFVWWVAHNTAVNLARANIASGFGFLNGRAGFEV 81 Query: 73 DQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVY 132 Q ++ Y+SDS+Y A+LVGF+NT +A +G+I ATIIG ++G GRLS N L+A +C VY Sbjct: 82 GQSLIAYSSDSTYGRALLVGFLNTILIAVTGIISATIIGFIIGIGRLSRNWLIAKLCTVY 141 Query: 133 VEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVF 192 VEVFRNIPPL+VIFF Y VL+VLP S+ LP G +LNNRGLSFP + Sbjct: 142 VEVFRNIPPLLVIFFWYSGVLAVLPNARESLHLPLGSYLNNRGLSFPKPIFGEGFWLVGI 201 Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252 + V+ I+ R + TGK ++ S L+ GLP + + L FD P+ G Sbjct: 202 AVVIAIIAVFATARWAHRRQAATGKPFHTIWASIGLLIGLPLVAFLLAGAPLSFDYPIAG 261 >gi|209549222|ref|YP_002281139.1| polar amino acid ABC transporter inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209534978|gb|ACI54913.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 779 Score = 174 bits (442), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 124/372 (33%), Positives = 202/372 (54%), Gaps = 22/372 (5%) Query: 23 RVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQG------- 75 R+ + ++Q+ + L+ V+ V + + + FL+ AGF+I +G Sbjct: 26 RIRHEAIQLGIVGLVVVLLGILAYAVKAGLSEKGIRFSFSFLANTAGFDISEGWTLTSGE 85 Query: 76 -IVP----YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICR 130 +VP ++SD S A+A + G NT +A + +TI+GTL+G GRLS N +V +C Sbjct: 86 GVVPGLSQFSSDMSVASAFVTGIFNTAKVALLAIALSTILGTLLGVGRLSTNWVVRNLCF 145 Query: 131 VYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIF 190 VE RN P L+ + F Y +V+ P + L G+ ++ +G+ PTL Sbjct: 146 WIVEFVRNTPLLIQLVFWYFAVVLRFPPMASAAKLYGGLIVSQQGIYVPTLAWSGG---- 201 Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 V + L +V + + + L F G + ++ + FGL LIA + D PV Sbjct: 202 VSTLSLILVTATWVSVLGAVFDPIRGMRRICIAVAV-VCFGL----LIATG-GMTVDFPV 255 Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 +F GG+++SPE +L +A+ +A+FIAEIVR + A+P+ Q EAA +LG + R Sbjct: 256 ANKFKASGGTSISPEMAALLLAVVVNSASFIAEIVRGAIDALPKSQWEAAGSLGFSRRDT 315 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370 ++LPQ R ++P +QY++L KN++L +AVG+ DL ++ GTI NQTG ++E I+I Sbjct: 316 VNDIVLPQVFRVVLPSFGNQYISLTKNTALGIAVGYPDLFNIYGTIANQTGHSLEGIIIV 375 Query: 371 MFIYLSLSIMIA 382 M YL LS +I+ Sbjct: 376 MASYLILSWIIS 387 Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 40/113 (35%), Positives = 64/113 (56%), Gaps = 6/113 (5%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I + + AA++AE VRSGL AVPR Q EAA +LG++ R +LPQA+R ++ PL Sbjct: 650 IGFTIFYAAYVAEYVRSGLQAVPRAQTEAARSLGMSEFDINRSTVLPQALRVVVAPLVGN 709 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTII------NQTGQAIEIILIWMFIYLSL 377 L++ ++ L +G D + G I+ ++T + + +LI F+ SL Sbjct: 710 VLDIFNSAPLVFIIGLTDFLRAGQMILANPQYGDRTFEVLSFLLITYFLVGSL 762 >gi|254430534|ref|ZP_05044237.1| ABC-type permease for basic amino acids and glutamine [Cyanobium sp. PCC 7001] gi|197624987|gb|EDY37546.1| ABC-type permease for basic amino acids and glutamine [Cyanobium sp. PCC 7001] Length = 331 Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 120/352 (34%), Positives = 177/352 (50%), Gaps = 60/352 (17%) Query: 46 NNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMI 105 N+ N+ + L L +L + AGF I + +P+ + Y A+L G NT G+I Sbjct: 40 GNLIRNLTAAGLLLTWRWLGQPAGFNIGESTIPFDAALPYWRALLAGLANTLRAVVCGLI 99 Query: 106 PATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVL 165 AT++GT+ G S+N L+ + R YVEV RNIP L+ + F Y V LP + Sbjct: 100 GATLLGTMAGMANFSSNGLLRGLVRGYVEVVRNIPLLLQLVFWYFVVFLALPNGAAA--- 156 Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225 L P LT+ + +++ F G E G Sbjct: 157 ----------LQLPGLTL-AKSGLYLAGFGPG--------------WEWAG--------- 182 Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285 PTLV + L S EF +L L Y+ A+IAE+V Sbjct: 183 -------PTLVNGVWQAPLRL----------------SVEFGALLCGLVVYSGAYIAEVV 219 Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345 R+G+ AVP GQ EAA +LGL + R V+LPQA+R I+P L +QY++L KNSSLAVAVG Sbjct: 220 RAGIAAVPEGQWEAASSLGLGWLASVRHVVLPQALRVIVPGLNTQYISLAKNSSLAVAVG 279 Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 + DL +V T +NQTG+A+E++++ + YL L ++I+ MN LN + ++E+ Sbjct: 280 YPDLYAVAETTLNQTGRAVEMVILLLAAYLVLDLLISAVMNGLNRLVQIRER 331 >gi|209547000|ref|YP_002278918.1| polar amino acid ABC transporter inner membrane protein [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209538244|gb|ACI58178.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 402 Score = 172 bits (437), Expect = 6e-41, Method: Compositional matrix adjust. Identities = 122/366 (33%), Positives = 194/366 (53%), Gaps = 27/366 (7%) Query: 48 VYNNMEKSNLSLGIGFLSERAGFEIDQG-----------IVPYTSDSSYATAILVGFVNT 96 + ++ + ++ G+L + F + +G +V TSDS+ + G NT Sbjct: 49 IQQSLAERGIAFSFGYLFRPSQFNVSEGFAAVWDGWWPALVQVTSDSTNLQMLTAGLFNT 108 Query: 97 FWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV-VIFFLYKSVLSV 155 +A ++ +T+IG + G RLS N L+ I VE RN P L+ V+F+ + L V Sbjct: 109 IKVALLAILFSTVIGVIFGVARLSTNWLIRQIAFAIVEFVRNTPLLIQVVFWYFAFFLRV 168 Query: 156 LPIPDHSIVLPFGMFLNNRGLSFPTLTM-DTNAKIFVFSFVLGIVLSLFAT--RLSRHFH 212 P+ D + V + +F GL P L + D V L I L + A RLS Sbjct: 169 PPVTDAANVEKWFVF-GQSGLFLPLLQISDGVDSGTVVLIALAIALMILACWPRLS---- 223 Query: 213 EKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIA 272 G+ L F + A +++ P++G+F GG +SPE ++ IA Sbjct: 224 --LGRRWVL-----FGAGAVAAAAGYATGFRMDLALPLVGRFGATGGLQLSPEMSAILIA 276 Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 + +AA+IAEIVR + +P+GQ EAA A+GL+ + R V+LPQ R I+P L ++Y+ Sbjct: 277 IVVNSAAYIAEIVRGAIEGLPKGQWEAAAAVGLSRKDTIRDVILPQVFRIILPSLANRYI 336 Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 +L K++SL +A+GF DL +V GT+ NQTG ++E +LI M IYL LS +I+ F+N LN ++ Sbjct: 337 SLTKDTSLGIAIGFPDLFNVSGTVANQTGHSLETVLIVMAIYLMLSWLISAFINFLNGRV 396 Query: 393 ALKEKK 398 L+ + Sbjct: 397 ILEGAR 402 >gi|310816975|ref|YP_003964939.1| ABC glutamate/glutamine/aspartate/asparagine transporter, inner membrane subunit BztB [Ketogulonicigenium vulgare Y25] gi|308755710|gb|ADO43639.1| ABC glutamate/glutamine/aspartate/asparagine transporter, inner membrane subunit BztB [Ketogulonicigenium vulgare Y25] Length = 478 Score = 169 bits (429), Expect = 5e-40, Method: Compositional matrix adjust. Identities = 90/179 (50%), Positives = 122/179 (68%), Gaps = 6/179 (3%) Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279 P+++ + FG P A + D P LG FNF GG V ++L++ALS YT A Sbjct: 305 PIIWAALTTPFGAP-----AFNPSIALDIPALGGFNFTGGFNVRASLVALWLALSLYTGA 359 Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339 FIAEIVRSG++AVP+GQ EAA ALG+ ++ +V+LPQAMR I+PP+ SQYLNL KNSS Sbjct: 360 FIAEIVRSGIMAVPKGQSEAAAALGMPAGRSMTMVILPQAMRVIVPPMISQYLNLTKNSS 419 Query: 340 LAVAVGFADL-VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 LA+AVG+ D+ ++GG INQTG+ +E +L+ YL LS+MIA N NA++ LKE+ Sbjct: 420 LAIAVGYMDVRATLGGITINQTGRELEGMLLMGMFYLVLSLMIAGVGNWFNARVKLKER 478 Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 69/226 (30%), Positives = 118/226 (52%), Gaps = 6/226 (2%) Query: 17 KFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGI 76 + L D R +I++QII +L + F W V N N+ + + FL +R+ ++I+Q + Sbjct: 16 QLLSDTRYRSITIQIIALILFALGFWWLVGNTIENLSRLGKTFSFSFLGQRSNYDINQRL 75 Query: 77 VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136 + Y S S++ A +VG +NT +A G + AT+IG + G RLS N +VA + VY+E F Sbjct: 76 ISYDSTSTHGRAAVVGILNTLLVAAMGCVLATVIGVMAGVLRLSKNWIVARLMAVYIEGF 135 Query: 137 RNIPPLVVIFFLYKSVLSVLPIP------DHSIVLPFGMFLNNRGLSFPTLTMDTNAKIF 190 RN+P L+ I +Y V P P D S++L + + NRG+ P A + Sbjct: 136 RNVPLLLWILLIYAMVSESTPAPRAFGSGDASMLLWDSIAITNRGIYIPGPVFTPGAWLV 195 Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV 236 + +F++G+ ++ SR TG +++ ++ G+ LV Sbjct: 196 LAAFIVGLGVAWQQWSASRKRQIATGTPPMSRWLAAGIVLGITGLV 241 >gi|317970284|ref|ZP_07971674.1| polar amino acid ABC transporter, inner membrane subunit [Synechococcus sp. CB0205] Length = 318 Score = 169 bits (428), Expect = 6e-40, Method: Compositional matrix adjust. Identities = 117/352 (33%), Positives = 183/352 (51%), Gaps = 71/352 (20%) Query: 47 NVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIP 106 N+ N+ + L L ++ AGF+I +P+++D Y A+L G VNT + G+I Sbjct: 37 NLVQNLAAAGLLLTWRWIGNPAGFDIAGSWLPFSADQPYWWALLAGLVNTLRVVVIGLIG 96 Query: 107 ATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV-VIFFLYKSVLSVLPIPDHSIVL 165 A+I+GT VG S N L+ + RVYVE+ RNIP L+ ++F+ + LS L Sbjct: 97 ASIVGTAVGVASFSGNALLRGLARVYVELIRNIPLLLQLVFWYFVVFLS----------L 146 Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225 P G + + +P G+VL+ Sbjct: 147 PGGA----QAIQWP-----------------GVVLA-----------------------Q 162 Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285 + L G+P LV + P+ +S EF +L L Y +AFI+E+V Sbjct: 163 SGLYLGMPELV------NGVWQAPI----------RLSVEFAALLTGLIVYISAFISEVV 206 Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345 R G+ +VP+GQ EAA ALG + + R V+LPQA+ I+P L +QY++L K+SSLA+A G Sbjct: 207 RGGIASVPKGQWEAARALGFSPLQTLRRVVLPQALPVIVPGLNNQYISLAKSSSLAIACG 266 Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 +ADL SV T +NQTG+A+E+++I + YL++ ++I+ MN LN + L+ + Sbjct: 267 YADLYSVAETTLNQTGRAVEVMVILLGAYLAMDLVISALMNALNRAVQLRSR 318 >gi|190891653|ref|YP_001978195.1| putative amino acid ABC transporter, permease protein [Rhizobium etli CIAT 652] gi|190696932|gb|ACE91017.1| putative amino acid ABC transporter, permease protein [Rhizobium etli CIAT 652] Length = 404 Score = 169 bits (427), Expect = 8e-40, Method: Compositional matrix adjust. Identities = 119/366 (32%), Positives = 193/366 (52%), Gaps = 23/366 (6%) Query: 25 HNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQG--------- 75 H + +Q+ + L+ V+ V + + + FL+ AGF+I +G Sbjct: 29 HEV-IQLGIVALVVVLLGMLAYAVKAGLAEKGIRFSFSFLANTAGFDISEGWTLTSGEGF 87 Query: 76 ---IVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVY 132 + ++SD S A+A + G NT +A +I +TI+GT++G GRLS N +V +C Sbjct: 88 VPNLAQFSSDMSIASAFVTGIFNTAKIALLAIILSTILGTMLGVGRLSTNWVVRNLCFWI 147 Query: 133 VEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVF 192 VE RN P L+ + F Y +V+ P + L G+ ++ +G+ PTL+ Sbjct: 148 VEFVRNTPLLIQLVFWYFAVVLRFPPMASAAKLYGGLVVSQQGIYIPTLSWTGGVSTLSL 207 Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252 V +SL L F G A + + + GL L+A ++ + PV Sbjct: 208 ILVTATGVSL----LGAVFDPVRG-ARRICAAAAVVCLGL----LVATG-EMTVNFPVAN 257 Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312 +F GG+++SPE +L +A+ +A+FIAE VR + A+P+ Q EAA +LGL+ R Sbjct: 258 KFKASGGTSISPEMAALLLAIVVNSASFIAETVRGAIDALPKAQWEAAGSLGLSRRDTVN 317 Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372 ++LPQ R ++P +QY++L KN++L +AVG+ DL ++ GTI NQTG ++E I+I M Sbjct: 318 DIILPQVFRVVLPSFGNQYISLSKNTALGIAVGYPDLFNIYGTIANQTGHSLEGIIIVMA 377 Query: 373 IYLSLS 378 YL LS Sbjct: 378 SYLILS 383 >gi|85716215|ref|ZP_01047189.1| amino acid ABC transporter, inner membrane component [Nitrobacter sp. Nb-311A] gi|85696887|gb|EAQ34771.1| amino acid ABC transporter, inner membrane component [Nitrobacter sp. Nb-311A] Length = 298 Score = 167 bits (422), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 103/277 (37%), Positives = 154/277 (55%), Gaps = 2/277 (0%) Query: 4 NARKTVTRYFSRMKFLYDMRVH--NISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGI 61 +RK ++F R++ R +++Q + ++LT V N N+E +++ G+ Sbjct: 22 KSRKPPLQFFLRLRRALGGRAGWGGLALQALFIVVLTWAGYEIVANAKGNLEAQHIASGL 81 Query: 62 GFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSA 121 GF+S AGF + Q ++PY+ SY LVG VNT +A G+ AT+IG LV GRLS Sbjct: 82 GFMSNTAGFGVSQTLLPYSETDSYTRVFLVGLVNTLVVAAVGIFFATVIGFLVALGRLSP 141 Query: 122 NKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTL 181 N L++ I YVE+ RN+P L I F Y +VLS LP P SI + G+FL+NRGL P Sbjct: 142 NWLISRIAGGYVELVRNLPLLFQILFWYLAVLSTLPSPKQSISVFDGIFLSNRGLVIPKP 201 Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALK 241 F+ + V+ I+ + SR ++G+AL + + L+ GLP ++ Sbjct: 202 VGYEGLIAFIMAVVVAIIGCMMLRNRSRRGLFRSGRALVVWPYALGLLIGLPAAAMVIFG 261 Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTA 278 F+ PVL FNF+GG+ + PEF++L IALS YTA Sbjct: 262 VPFTFEMPVLKGFNFVGGAHLIPEFVALAIALSTYTA 298 >gi|150397300|ref|YP_001327767.1| binding-protein-dependent transport systems inner membrane component [Sinorhizobium medicae WSM419] gi|150028815|gb|ABR60932.1| binding-protein-dependent transport systems inner membrane component [Sinorhizobium medicae WSM419] Length = 402 Score = 166 bits (421), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 114/367 (31%), Positives = 193/367 (52%), Gaps = 32/367 (8%) Query: 32 ILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQG------------IVPY 79 ++A +T++ L+ + V + + + FL + AGF++ +G + Sbjct: 36 VIAAAITLVVLFALA-VKEGLARHGIRFSFSFLWDAAGFDLSEGKTFVFDGTFWLAFTEF 94 Query: 80 TSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRV----YVEV 135 TS+ S A A G VNT +A ++ +T++G L+G RLS N W+ R VE Sbjct: 95 TSERSIAQAFAAGIVNTTKVAVLAIVLSTMLGVLLGVSRLSTN----WVARSLSFWCVEF 150 Query: 136 FRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFV 195 RN P L+ + F Y +V+ P P + +G+ ++ +GL FP L + Sbjct: 151 VRNTPLLIQLVFWYFAVILHFP-PIAAAAEFYGVVISQQGLFFPALVWKGEGSPVAIAMA 209 Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFN 255 +++ +H + + + + ++ LP L+L+ +L F PV +F Sbjct: 210 TACWVAILGLVFDKH------RLVRRVCMGAIVV--LPCLMLLTGIVELDF--PVASKFR 259 Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315 GG+ +SPE +L +A+ +A++IAEIVR + A+P+GQ EAA +LGL+ R ++ Sbjct: 260 AKGGTGMSPEMAALLLAIVVNSASYIAEIVRGAIDALPKGQWEAAASLGLSRRDTVHDII 319 Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375 LPQ R ++P +QY++L KN++L +AVG+ +L ++ GTI NQTG ++E ILI M YL Sbjct: 320 LPQVFRVVLPSFGNQYISLTKNTALGIAVGYPELFNIYGTIANQTGHSLEGILIVMASYL 379 Query: 376 SLSIMIA 382 LS I+ Sbjct: 380 ILSWAIS 386 >gi|260757722|ref|ZP_05870070.1| polar amino acid ABC transporter [Brucella abortus bv. 4 str. 292] gi|260668040|gb|EEX54980.1| polar amino acid ABC transporter [Brucella abortus bv. 4 str. 292] Length = 289 Score = 165 bits (418), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 92/231 (39%), Positives = 129/231 (55%), Gaps = 8/231 (3%) Query: 3 KNARKTVTRYFSRMK--------FLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEK 54 + RK + YF + LYD R I Q+++ + W V N N+++ Sbjct: 57 ERHRKHMASYFGTERRQGSGGTSLLYDPRARGIFYQVVVFGAVIAGIYWIVGNTITNLQR 116 Query: 55 SNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLV 114 +N++ G GFL RAGF+I Q ++ Y SDS+Y A LVG VNT ++A G++ A+IIG LV Sbjct: 117 ANIASGFGFLYGRAGFDISQTLIQYNSDSTYGRAFLVGLVNTLYVAALGVVTASIIGFLV 176 Query: 115 GAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNR 174 G GRLS N L+ IC VYVEVFRNIPPL+VIFF Y VLSVLP S +P ++NNR Sbjct: 177 GIGRLSHNWLIRNICTVYVEVFRNIPPLLVIFFWYFGVLSVLPPVRQSYSMPLSTYINNR 236 Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225 G P+ A + ++GI+ S R ++ TG+ + +S Sbjct: 237 GFFMPSPVWGEGAWAVPVALLIGILASFAVARWAKRRQMATGQPFHTIRVS 287 >gi|260545548|ref|ZP_05821289.1| polar amino acid ABC transporter [Brucella abortus NCTC 8038] gi|260096955|gb|EEW80830.1| polar amino acid ABC transporter [Brucella abortus NCTC 8038] Length = 284 Score = 165 bits (418), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 92/231 (39%), Positives = 129/231 (55%), Gaps = 8/231 (3%) Query: 3 KNARKTVTRYFSRMK--------FLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEK 54 + RK + YF + LYD R I Q+++ + W V N N+++ Sbjct: 52 ERHRKHMASYFGTERRQGSGGTSLLYDPRARGIFYQVVVFGAVIAGIYWIVGNTITNLQR 111 Query: 55 SNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLV 114 +N++ G GFL RAGF+I Q ++ Y SDS+Y A LVG VNT ++A G++ A+IIG LV Sbjct: 112 ANIASGFGFLYGRAGFDISQTLIQYNSDSTYGRAFLVGLVNTLYVAALGVVTASIIGFLV 171 Query: 115 GAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNR 174 G GRLS N L+ IC VYVEVFRNIPPL+VIFF Y VLSVLP S +P ++NNR Sbjct: 172 GIGRLSHNWLIRNICTVYVEVFRNIPPLLVIFFWYFGVLSVLPPVRQSYSMPLSTYINNR 231 Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225 G P+ A + ++GI+ S R ++ TG+ + +S Sbjct: 232 GFFMPSPVWGEGAWAVPVALLIGILASFAVARWAKRRQMATGQPFHTIRVS 282 >gi|189023945|ref|YP_001934713.1| General L-amino acid transport system permease protein AAPQ [Brucella abortus S19] gi|254689007|ref|ZP_05152261.1| general L-amino acid transport system permease protein aapQ [Brucella abortus bv. 6 str. 870] gi|254697142|ref|ZP_05158970.1| general L-amino acid transport system permease protein aapQ [Brucella abortus bv. 2 str. 86/8/59] gi|254730038|ref|ZP_05188616.1| general L-amino acid transport system permease protein aapQ [Brucella abortus bv. 4 str. 292] gi|256257257|ref|ZP_05462793.1| general L-amino acid transport system permease protein aapQ [Brucella abortus bv. 9 str. C68] gi|260883530|ref|ZP_05895144.1| polar amino acid ABC transporter [Brucella abortus bv. 9 str. C68] gi|189019517|gb|ACD72239.1| General L-amino acid transport system permease protein AAPQ [Brucella abortus S19] gi|260873058|gb|EEX80127.1| polar amino acid ABC transporter [Brucella abortus bv. 9 str. C68] Length = 227 Score = 164 bits (415), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 88/207 (42%), Positives = 122/207 (58%) Query: 19 LYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVP 78 LYD R I Q+++ + W V N N++++N++ G GFL RAGF+I Q ++ Sbjct: 19 LYDPRARGIFYQVVVFGAVIAGIYWIVGNTITNLQRANIASGFGFLYGRAGFDISQTLIQ 78 Query: 79 YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138 Y SDS+Y A LVG VNT ++A G++ A+IIG LVG GRLS N L+ IC VYVEVFRN Sbjct: 79 YNSDSTYGRAFLVGLVNTLYVAALGVVTASIIGFLVGIGRLSHNWLIRNICTVYVEVFRN 138 Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198 IPPL+VIFF Y VLSVLP S +P ++NNRG P+ A + ++GI Sbjct: 139 IPPLLVIFFWYFGVLSVLPPVRQSYSMPLSTYINNRGFFMPSPVWGEGAWAVPVALLIGI 198 Query: 199 VLSLFATRLSRHFHEKTGKALPLLYIS 225 + S R ++ TG+ + +S Sbjct: 199 LASFAVARWAKRRQMATGQPFHTIRVS 225 >gi|119897621|ref|YP_932834.1| putative amino acid permease [Azoarcus sp. BH72] gi|119670034|emb|CAL93947.1| putative amino acid permease [Azoarcus sp. BH72] Length = 339 Score = 162 bits (409), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 115/329 (34%), Positives = 165/329 (50%), Gaps = 66/329 (20%) Query: 50 NNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATI 109 +M + + G FL + AGF I +G+ + SY A VG NT +A + A Sbjct: 51 GHMRERGIHSGFDFLLQSAGFWISEGVPAFDPAESYLKAFGVGLANTLRVALPATLAALA 110 Query: 110 IGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGM 169 IG LVG GR++ N L+ C YVE RNI PL++ Sbjct: 111 IGFLVGLGRIAHNPLLRACCTAYVETLRNI-PLLL------------------------- 144 Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFH---EKTGKALPLLYIST 226 ++ + FVL VL A + H K+G ALP Sbjct: 145 ------------------QLLAWYFVLTAVLPPAAQAIELLPHVYLGKSGLALPW----- 181 Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286 P I L P G F+ GG+ +SPE+++L+I L+ YTA++IAE VR Sbjct: 182 ------PGADGIEL--------PERGGFSISGGAQLSPEYLALFIGLATYTASYIAESVR 227 Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346 +G+ AV GQ +AA+ALGL + R + LPQA+ +I+PPL + LN++KNSSLAVA+G+ Sbjct: 228 AGVQAVSAGQAQAAVALGLRRGQILRHITLPQALPAIVPPLANHALNVIKNSSLAVAIGY 287 Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYL 375 DLVS+ T +NQTG+A+E I I + +Y+ Sbjct: 288 PDLVSIANTTLNQTGRAVECIAIVVAVYV 316 >gi|239815921|ref|YP_002944831.1| polar amino acid ABC transporter inner membrane subunit [Variovorax paradoxus S110] gi|239802498|gb|ACS19565.1| polar amino acid ABC transporter, inner membrane subunit [Variovorax paradoxus S110] Length = 332 Score = 159 bits (403), Expect = 6e-37, Method: Compositional matrix adjust. Identities = 80/157 (50%), Positives = 114/157 (72%) Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301 + HFD P G F GG+ +SPE++++ LS Y+AAF+AEIVR+G+++VP+GQ+ A Sbjct: 176 WPTHFDWPERGDFGVSGGAALSPEYVTIVAGLSFYSAAFVAEIVRAGILSVPQGQVLAGQ 235 Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361 ALGL + R+V+LPQA+R I+P LT+Q L+L+KNSSLAVAVG+ +LVSV T I G Sbjct: 236 ALGLAPVQQLRIVILPQALRVIVPSLTNQLLSLVKNSSLAVAVGYPELVSVANTTIGSNG 295 Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 +A E I I M +YL LS++I+ MNR NA++AL+ + Sbjct: 296 RAFECIAIIMAVYLLLSLLISFGMNRYNARVALRGWR 332 Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 46/134 (34%), Positives = 74/134 (55%) Query: 46 NNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMI 105 N+ + + G FL+E AGF I +G + + + + A L G VNT + I Sbjct: 33 NHALEVLRARGVRSGFDFLAEPAGFSISEGWLGFEASQPFWRAFLAGLVNTVRASVPAAI 92 Query: 106 PATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVL 165 + ++GTL+G GRL+ + L+ IC YVE+ RN+P LV + L ++ ++LP P + L Sbjct: 93 FSVVLGTLIGIGRLAPHVLLRGICTAYVELLRNVPLLVQLLMLAFAIANLLPDPTEPVRL 152 Query: 166 PFGMFLNNRGLSFP 179 G++L+ GLS P Sbjct: 153 LPGVWLSKGGLSVP 166 >gi|218672486|ref|ZP_03522155.1| general L-amino acid ABC transporter, permease protein [Rhizobium etli GR56] Length = 188 Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 84/165 (50%), Positives = 116/165 (70%) Query: 13 FSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEI 72 +S LYD ++ I Q++ +LL + W +N N+ ++N++ G GFL+ RAGFE+ Sbjct: 22 WSFQSALYDPKIRGIFFQVLTIVLLVTLIWWIAHNTAVNLARANIASGFGFLNSRAGFEV 81 Query: 73 DQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVY 132 Q ++ Y+SDS+Y A+LVG +NT +A +G+I ATIIG ++G GRLS N L+A +C VY Sbjct: 82 GQSLIAYSSDSTYGRALLVGLLNTILIAVTGIITATIIGFIIGIGRLSRNWLIAKLCTVY 141 Query: 133 VEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLS 177 VEVFRNIPPL+VIFF Y VL++LP S+ LPFG FLNNRGLS Sbjct: 142 VEVFRNIPPLLVIFFWYSGVLAILPNARESLQLPFGSFLNNRGLS 186 >gi|298491368|ref|YP_003721545.1| polar amino acid ABC transporter inner membrane subunit ['Nostoc azollae' 0708] gi|298233286|gb|ADI64422.1| polar amino acid ABC transporter, inner membrane subunit ['Nostoc azollae' 0708] Length = 308 Score = 157 bits (397), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 76/139 (54%), Positives = 104/139 (74%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G T SPEF +L + L+ YT AFIAEIVR G+ ++P+GQ EA ++LGL RLV+ PQ Sbjct: 170 GFTFSPEFSTLLLGLTFYTGAFIAEIVRGGIKSLPKGQWEAGLSLGLKPTLLIRLVIFPQ 229 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378 A+R IIPPLTSQYLNL KNSSLA+A+G+ D+ V T NQTG+A+E++++ M YL+LS Sbjct: 230 ALRVIIPPLTSQYLNLTKNSSLAIAIGYPDIYFVASTTFNQTGKAVEVMILIMLTYLTLS 289 Query: 379 IMIALFMNRLNAKIALKEK 397 ++I+L MN LN + +KE+ Sbjct: 290 LIISLMMNLLNRSVQIKER 308 Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 55/164 (33%), Positives = 84/164 (51%), Gaps = 4/164 (2%) Query: 21 DMRVHNISVQIILALLLTVI--FLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVP 78 D R I+VQ I +L+ I LW N+ N+++ + G FL + A F+I + +V Sbjct: 11 DYRFWRIAVQCIAVILVIAIVAILWM--NLNRNLQQLGIKFGFDFLQQEASFDIGETLVN 68 Query: 79 YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138 Y +Y A+ VG +N+ +A +G++ TI+G G L N LV I VYVEVFRN Sbjct: 69 YKPTDTYILALWVGLINSLRVAIAGILLTTIVGITAGIASLFDNWLVRNISLVYVEVFRN 128 Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLT 182 P L+ + F Y V V P ++ + + L+ G+ P T Sbjct: 129 TPLLLQLLFWYFGVFLVFPKVENKFYVWGLIHLSQNGIELPGFT 172 >gi|261317401|ref|ZP_05956598.1| amino acid ABC transporter [Brucella pinnipedialis B2/94] gi|261296624|gb|EEY00121.1| amino acid ABC transporter [Brucella pinnipedialis B2/94] Length = 251 Score = 155 bits (393), Expect = 8e-36, Method: Compositional matrix adjust. Identities = 84/186 (45%), Positives = 112/186 (60%), Gaps = 8/186 (4%) Query: 3 KNARKTVTRYFSRMK--------FLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEK 54 + RK + YF + LYD R I Q+++ + W V N N+++ Sbjct: 52 ERHRKHMASYFGTERRQGSGGTSLLYDPRARGIFYQVVVFGAVIAGIYWIVGNTITNLQR 111 Query: 55 SNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLV 114 +N++ G GFL RAGF+I Q ++ Y SDS+Y A LVG VNT ++A G++ A+IIG LV Sbjct: 112 ANIASGFGFLYGRAGFDISQTLIQYNSDSTYGRAFLVGLVNTLYVAALGVVTASIIGFLV 171 Query: 115 GAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNR 174 G GRLS N L+ IC VYVEVFRNIPPL+VIFF Y VLSVLP S +P ++NNR Sbjct: 172 GIGRLSHNWLIRNICTVYVEVFRNIPPLLVIFFWYFGVLSVLPPVRQSYSMPLSTYINNR 231 Query: 175 GLSFPT 180 G P+ Sbjct: 232 GFFMPS 237 >gi|319793875|ref|YP_004155515.1| polar amino acid ABC transporter, inner membrane subunit [Variovorax paradoxus EPS] gi|315596338|gb|ADU37404.1| polar amino acid ABC transporter, inner membrane subunit [Variovorax paradoxus EPS] Length = 332 Score = 155 bits (391), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 78/157 (49%), Positives = 114/157 (72%) Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301 + HF+ P G F GG+ +SPE++++ LS Y+AAF+AEIVR+G+++V +GQ+ A Sbjct: 176 WPTHFEWPERGDFGVSGGAALSPEYVTIVAGLSFYSAAFVAEIVRAGILSVSQGQVLAGQ 235 Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361 ALGL+ + R+V+LPQA+R I+P LT+Q L+L+KNSSLAVAVG+ +LVSV T I G Sbjct: 236 ALGLSSVQQLRIVILPQALRVIVPSLTNQLLSLVKNSSLAVAVGYPELVSVANTTIGSNG 295 Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 +A E I I M +YL LS++I+ MNR NA++AL+ + Sbjct: 296 RAFECIAIIMAVYLLLSLVISFGMNRYNARVALRGWR 332 Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 52/152 (34%), Positives = 84/152 (55%) Query: 28 SVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYAT 87 +VQ +L L + W V++ + + + G FL+E AGF I +G + + + + Sbjct: 15 TVQALLVLAVVAGAFWVVHHALDVLRARGVRSGFDFLTEPAGFSISEGWLDFDASQPFWR 74 Query: 88 AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147 A L G VNT A I + ++GTL+G GRL+ + L+ IC YVE+ RN+P LV + Sbjct: 75 AFLAGLVNTVRAAVPAAIFSVVLGTLIGIGRLAPHVLMRGICTAYVELLRNVPLLVQLLM 134 Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFP 179 L ++ ++LP P + L G++L+ GLS P Sbjct: 135 LAFAMANLLPDPTEPVRLLPGVWLSKGGLSVP 166 >gi|295689852|ref|YP_003593545.1| hypothetical protein Cseg_2472 [Caulobacter segnis ATCC 21756] gi|295431755|gb|ADG10927.1| conserved hypothetical protein [Caulobacter segnis ATCC 21756] Length = 378 Score = 153 bits (387), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 129/350 (36%), Positives = 188/350 (53%), Gaps = 14/350 (4%) Query: 46 NNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMI 105 N N+ S L+ G FL AGF+I + + Y+ S A +LVG +NT + G Sbjct: 36 RNGAANLRASGLASGFDFLGRAAGFDIAETPIAYSPRDSNAKVLLVGALNTLKVTGLGAT 95 Query: 106 PATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVL 165 A+++G G + + V + + YVE+FRNI PL V+ + S+L++ P P ++ L Sbjct: 96 LASLLGLAFGVALRARSGPVRILAQGYVELFRNI-PLPVLLLVLYSLLAMAPPPRAALDL 154 Query: 166 PFGM-FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224 FG+ F++NRGL P L + L + + R R + + L Sbjct: 155 -FGLGFVSNRGLYLPRLDWRWGGGGALAGAALALAALVAIWR--RAPSRRAAQVL----- 206 Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284 +F G L L+ L P F F+GG VSP ++L L YT +IAE+ Sbjct: 207 -SFGWLGFCGLGLVLSVSGLEV--PRAQGFGFVGGQVVSPPLLALVGGLGLYTGGYIAEV 263 Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344 VR L A+ GQ EAA ALGL+ + L+ LPQA+R PPL SQYLNL KN+SLA+ V Sbjct: 264 VRGALAAIAPGQAEAAQALGLSPIQTLMLITLPQALRVAAPPLASQYLNLAKNASLAIIV 323 Query: 345 GFADLVS-VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393 G+ DLV+ +GGT++NQTGQAIE + + + YL+LS+ I+ +N A+ A Sbjct: 324 GYPDLVALLGGTVLNQTGQAIETLGLILVFYLALSLSISGLINLWAARQA 373 >gi|149925440|ref|ZP_01913704.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Limnobacter sp. MED105] gi|149825557|gb|EDM84765.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Limnobacter sp. MED105] Length = 275 Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 74/146 (50%), Positives = 108/146 (73%) Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306 + PV G+F+ GG +SPE++++ +AL YTAAF+AEIVR+G+ AV G + A+ALGL+ Sbjct: 125 EAPVRGRFSIEGGWVLSPEYLAVLLALVVYTAAFVAEIVRAGVQAVRPGMRQGALALGLS 184 Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 + + TR V+LP A+R ++P L++QYLNLLKN+SL VAVG+ +LVSV T INQ+G+A+E Sbjct: 185 NAQTTRYVVLPLALRVVVPSLSNQYLNLLKNASLGVAVGYPELVSVANTAINQSGKAVEC 244 Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKI 392 +LI + Y LS + A MN LN ++ Sbjct: 245 VLIILVTYALLSAVAAGLMNALNTRV 270 Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 37/120 (30%), Positives = 71/120 (59%) Query: 63 FLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN 122 FLS+ AGF + +G + S Y +L G +NT + ++ +T++G L+G G+L+ + Sbjct: 5 FLSDPAGFGLSEGWLQVAFSSPYWQILLAGLLNTLKVGLPALLISTLLGLLIGLGQLAHH 64 Query: 123 KLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLT 182 L+ +C+ Y+ +FRN+P L+ + +Y ++ LPI + + +FL+ GL+FP+ + Sbjct: 65 PLLKGLCKGYINLFRNVPLLLQLLAIYFAITQFLPIASQAWSVGDSVFLSKSGLAFPSFS 124 >gi|254422592|ref|ZP_05036310.1| ABC transporter, permease protein, putative [Synechococcus sp. PCC 7335] gi|196190081|gb|EDX85045.1| ABC transporter, permease protein, putative [Synechococcus sp. PCC 7335] Length = 476 Score = 146 bits (368), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 71/140 (50%), Positives = 104/140 (74%) Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317 GG T+S +++ L+ YT AFIAEIVR+G+ +VPRGQ EAA ++GLT+ KA RLV+ P Sbjct: 337 GGLTMSVNYVASVTGLTFYTGAFIAEIVRAGIQSVPRGQWEAARSVGLTNDKAMRLVVFP 396 Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377 Q++R ++PPL S++ NL KNSSLA AVG+ +L ++ T NQTG+ IE+ L+ M YL+L Sbjct: 397 QSLRVLLPPLNSEFANLAKNSSLAFAVGYPELYNLANTTFNQTGKPIEVFLMMMATYLTL 456 Query: 378 SIMIALFMNRLNAKIALKEK 397 +++I+L MN+LN + KE+ Sbjct: 457 NLLISLNMNQLNKAVQFKER 476 Score = 93.2 bits (230), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 55/165 (33%), Positives = 82/165 (49%), Gaps = 4/165 (2%) Query: 19 LYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVP 78 L D R I+ Q+I+ + + + F + N+ N+ + GFL AGF I + ++ Sbjct: 16 LRDERFWQIAFQVIVTIAVILTFSYLFGNLSQNLRRQGTEFSFGFLQNPAGFGIGENMLG 75 Query: 79 YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138 Y + SYA I G VN+ L F +I ATI+G G S N L+ I R YV + RN Sbjct: 76 YETQDSYAKVIQAGIVNSLRLIFVSIITATIVGVAAGVASFSDNWLLHKISRTYVGLVRN 135 Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFG----MFLNNRGLSFP 179 +P L+ + F Y +V +P + IV P + NNR +S P Sbjct: 136 VPLLLQLVFWYSAVFLAIPTEANQIVFPNPSLPLIVANNRNVSLP 180 >gi|161170239|gb|ABX59210.1| ABC-type amino acid transport system permease component [uncultured marine group II euryarchaeote EF100_57A08] Length = 626 Score = 143 bits (361), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 103/349 (29%), Positives = 191/349 (54%), Gaps = 13/349 (3%) Query: 52 MEKSNLSLGIGFLSERAGFEIDQGIVPYTS--DSSYATAILVGFVNTFWLAFSGMIPATI 109 ME+ N+ F+++ F+I+ + T+ D + I +N+ + ++ TI Sbjct: 280 MERWNIEFA--FMNDANPFQINTWPIEVTNNIDDRWRFWI-AALLNSIRVTLLSIVFCTI 336 Query: 110 IGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLP--IPDHSIVLPF 167 +G +VG RLS+NKL + + YVE+FRN+P V++F + + + LP I + +IV Sbjct: 337 LGIIVGVSRLSSNKLTSSMATAYVEIFRNMPLAVLLFLISTQLGTTLPLFIAEENIV--- 393 Query: 168 GM-FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226 GM + +N+G+ P + F+ F + + + E + + I Sbjct: 394 GMIYYSNQGIYLPGFELSHLIYGFLIVFAIWVYWQIKDREGVDDSEEGVRRRFTIWVIGI 453 Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGS--TVSPEFMSLYIALSCYTAAFIAEI 284 + G+ I+L + + + G ++ G+ ++ EF+++ I L+ +T A +AEI Sbjct: 454 AVALGIILSGDISLPNYIKPNMGIPGTWDIEEGTGFEMTVEFLAMIIGLTLFTTAVVAEI 513 Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344 VR + ++PRGQ+EAA+++GL+ + RLV+LPQA+RS+IP L SQY+N+ KNSSLA+ V Sbjct: 514 VRGSIQSLPRGQVEAAVSIGLSPYQRLRLVILPQALRSMIPLLNSQYMNVWKNSSLAMIV 573 Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393 ++D+ V ++N G+ I + ++ + Y + S++I+ MN N ++ Sbjct: 574 AYSDVFYVIFVMMNNVGKLIPLFILLLLTYQAGSLLISGIMNVYNYRVT 622 >gi|25809421|emb|CAD57653.1| general L-amino acid transport system permease protein AapQ [Rhizobium etli] Length = 102 Score = 140 bits (353), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 69/102 (67%), Positives = 84/102 (82%) Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355 Q EAA ALGL TRLV++PQA+R IIPPL+SQYLNL KNSSLA+A+GFADLV+VG T Sbjct: 1 QTEAAGALGLHPSSITRLVVIPQALRIIIPPLSSQYLNLTKNSSLAIAIGFADLVAVGST 60 Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 +NQTGQA+E+ILIWM IYL LS++ +L MN NAK+AL E+ Sbjct: 61 TLNQTGQAVEVILIWMVIYLGLSVVTSLLMNWFNAKMALVER 102 >gi|222870369|gb|EEF07500.1| predicted protein [Populus trichocarpa] Length = 145 Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 71/140 (50%), Positives = 99/140 (70%) Query: 254 FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313 F GG ++PEF++L AL Y AA+ AEIVR+GL AVPRGQ AA ALG+ + RL Sbjct: 2 FGIDGGLALTPEFLALVGALGLYAAAYCAEIVRAGLQAVPRGQWNAASALGMRRGQQLRL 61 Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI 373 V+LPQA+R IIPP T+ L+ +KNSSLAVA+G+ D+V V T ++QTGQAIE + I + Sbjct: 62 VVLPQALRVIIPPYTNLALSTIKNSSLAVAIGYPDVVMVANTAMSQTGQAIECVTIIAVV 121 Query: 374 YLSLSIMIALFMNRLNAKIA 393 YL+++++ +L +N N + A Sbjct: 122 YLAINLLTSLALNAFNQRSA 141 >gi|75906962|ref|YP_321258.1| amino acid ABC transporter permease [Anabaena variabilis ATCC 29413] gi|75700687|gb|ABA20363.1| L-glutamate ABC transporter membrane protein / L-aspartate ABC transporter membrane protein / neutral amino acid ABC transporter membrane protein [Anabaena variabilis ATCC 29413] Length = 308 Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 76/137 (55%), Positives = 98/137 (71%) Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320 T SPEF +L + L YT AFIAEIVR G+ +V +GQ EA +LGL RLV+ PQA+ Sbjct: 172 TFSPEFSALLLGLIFYTGAFIAEIVRGGIQSVSKGQWEAGRSLGLNPSLIMRLVIFPQAL 231 Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380 R IIPPLTSQYLNL KNSSLA+A+G+ D+ V T NQTG+A+E++L+ M YLSLS+ Sbjct: 232 RVIIPPLTSQYLNLTKNSSLAIAIGYPDIYFVASTTFNQTGKAVEVMLLLMLTYLSLSLT 291 Query: 381 IALFMNRLNAKIALKEK 397 I+L MN N + +KE+ Sbjct: 292 ISLIMNAFNRTVQIKER 308 Score = 99.8 bits (247), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 58/165 (35%), Positives = 90/165 (54%) Query: 18 FLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIV 77 F D R I+ Q+I L + + N+ N+++ + G FL ++A F+I + ++ Sbjct: 8 FWRDNRFWYIAGQLIALFLAAFVVTILLGNLNRNLQRLGIQFGFDFLKQQASFDIGETLI 67 Query: 78 PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137 Y +Y+ A+ VG +N+ +AF G+I TI+G++ G RLS N LV I VYVE+FR Sbjct: 68 AYKPTDTYSLALWVGLINSLRIAFVGVILTTIVGSIAGIARLSDNWLVRNISLVYVEIFR 127 Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLT 182 N P L+ + F Y +V LP D+ I L + L+ GL P T Sbjct: 128 NTPLLLQLLFWYFAVFLGLPKADNKISLGGFISLSQNGLELPWFT 172 >gi|17231657|ref|NP_488205.1| permease protein of amino acid ABC transporter [Nostoc sp. PCC 7120] gi|17133300|dbj|BAB75864.1| permease protein of amino acid ABC transporter [Nostoc sp. PCC 7120] Length = 308 Score = 134 bits (336), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 76/137 (55%), Positives = 98/137 (71%) Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320 T SPEF +L + L YT AFIAEIVR G+ +V +GQ EA +LGL RLV+ PQA+ Sbjct: 172 TFSPEFSALLLGLIFYTGAFIAEIVRGGIQSVSKGQWEAGRSLGLNPSLIMRLVIFPQAL 231 Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380 R IIPPLTSQYLNL KNSSLA+A+G+ D+ V T NQTG+A+E++L+ M YLSLS+ Sbjct: 232 RVIIPPLTSQYLNLTKNSSLAIAIGYPDIYFVASTTFNQTGKAVEVMLLLMLTYLSLSLT 291 Query: 381 IALFMNRLNAKIALKEK 397 I+L MN N + +KE+ Sbjct: 292 ISLIMNAFNRTVQIKER 308 Score = 99.4 bits (246), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 59/165 (35%), Positives = 89/165 (53%) Query: 18 FLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIV 77 F D R I+ Q+I L + + N+ N+++ + G FL ++A F+I + ++ Sbjct: 8 FWRDNRFWYIAGQLIALFLAAFVVAILLGNLNRNLQRLGIQFGFDFLKQQASFDIGETLI 67 Query: 78 PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137 Y +Y+ A+ VG +N+ +AF G+I TI+G L G RLS N LV I VYVE+FR Sbjct: 68 AYKPTDTYSLALWVGLINSLRIAFVGIILTTIVGILAGIARLSDNWLVRNISLVYVEIFR 127 Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLT 182 N P L+ + F Y +V LP D+ I L + L+ GL P T Sbjct: 128 NTPLLLQLLFWYFAVFLGLPRADNKISLGGFIGLSQNGLELPWFT 172 >gi|297624237|ref|YP_003705671.1| polar amino acid ABC transporter inner membrane subunit [Truepera radiovictrix DSM 17093] gi|297165417|gb|ADI15128.1| polar amino acid ABC transporter, inner membrane subunit [Truepera radiovictrix DSM 17093] Length = 613 Score = 133 bits (334), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 69/149 (46%), Positives = 103/149 (69%) Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308 P + + ++ GG ++ FM+L + L YTA+FIAEIVR G+ AV +GQ EAA +LGL+ Sbjct: 465 PTIPRSDYEGGVRLTAAFMALLLGLVIYTASFIAEIVRGGIQAVNKGQREAAKSLGLSDA 524 Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368 + LV+ PQA+R I+PPL SQYLNL KNSSLA+ + + D ++G + NQTG + IIL Sbjct: 525 QTFNLVVFPQALRIILPPLISQYLNLTKNSSLALLITYPDFFAIGRIVANQTGATVPIIL 584 Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKEK 397 I + YL++S++ A +N +N ++AL E+ Sbjct: 585 IIIAGYLTISLIFAFILNIVNERLALVER 613 Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 60/171 (35%), Positives = 94/171 (54%), Gaps = 5/171 (2%) Query: 14 SRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEID 73 R+ F +++V I Q+I L+ + F NNV +E++N+ FL RAG I Sbjct: 13 ERIPFYRNVKVIGILAQLIFLALVVMGFWVLYNNVTTALERANIPANFNFLRARAGIPIG 72 Query: 74 QGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYV 133 + + Y + +YA A+ VG +NT ++ G++ AT++G LVG RLS+N L+ I +YV Sbjct: 73 ESPIRYNTADTYARALWVGVLNTLKVSLVGVVLATLLGILVGVMRLSSNWLLRQIASIYV 132 Query: 134 EVFRNIPPLVVIFFLYKSVLSVLPIPDH---SIVLPFGMFLNNRGLSFPTL 181 E RN P V + F + +VL +P+P I LP G + + GL+ P L Sbjct: 133 ETIRNTPLAVQLVFWFFAVL--VPLPPRISGPIELPGGAYFSQVGLALPWL 181 >gi|220910019|ref|YP_002485330.1| polar amino acid ABC transporter inner membrane subunit [Cyanothece sp. PCC 7425] gi|219866630|gb|ACL46969.1| polar amino acid ABC transporter, inner membrane subunit [Cyanothece sp. PCC 7425] Length = 305 Score = 132 bits (332), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 73/141 (51%), Positives = 103/141 (73%) Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316 +G +SPEF +L + L+ YT FIAEIVR G+ +VPRGQ EAA +LGL + LV+ Sbjct: 165 LGELNLSPEFCALLLGLTFYTGTFIAEIVRGGIQSVPRGQWEAARSLGLKPAQTLWLVIF 224 Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376 PQ++R+I+PPL +QYLNL KNSSLA+AVG+ DL +V T NQTG+A+E++L+ + YLS Sbjct: 225 PQSLRAIVPPLGNQYLNLAKNSSLALAVGYPDLYAVASTTYNQTGRAVEMMLLILITYLS 284 Query: 377 LSIMIALFMNRLNAKIALKEK 397 LS+ I+L +N N ++ L E+ Sbjct: 285 LSLSISLLLNLYNRRVQLPER 305 Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 53/143 (37%), Positives = 79/143 (55%) Query: 15 RMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQ 74 R D R I+ Q I L++ ++ L+ NN+ N+++ L GFL+ +AGF I + Sbjct: 6 RPPLWRDSRFWQIAGQAIALLVVVLLLLFLGNNLRQNLQRLGLQPDFGFLNFQAGFSIGE 65 Query: 75 GIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVE 134 + Y SY A+LVG VN+ + SG++ ATI+G L G RLS N L+ + +YVE Sbjct: 66 TPLDYKPTYSYWRALLVGLVNSLRVMISGIVLATIVGVLAGIARLSDNWLMRQLATLYVE 125 Query: 135 VFRNIPPLVVIFFLYKSVLSVLP 157 + RN P L+ + F Y V LP Sbjct: 126 ILRNAPLLLQLLFWYFVVFLSLP 148 >gi|119510484|ref|ZP_01629617.1| permease protein of amino acid ABC transporter [Nodularia spumigena CCY9414] gi|119464906|gb|EAW45810.1| permease protein of amino acid ABC transporter [Nodularia spumigena CCY9414] Length = 306 Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 72/135 (53%), Positives = 99/135 (73%) Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320 ++SPEF +L + L +T AFIAEIVR G+ +VP+GQ EAA +LG RLV+ PQA+ Sbjct: 172 SLSPEFSALLLGLVFFTGAFIAEIVRGGIQSVPKGQWEAARSLGFPPLLIMRLVIFPQAL 231 Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380 R IIPPLTSQYLNL KNSSLA+A+G+ D+ V T NQTG+A+E++L+ + YL+LS+ Sbjct: 232 RVIIPPLTSQYLNLTKNSSLAIAIGYPDIYFVASTTFNQTGRAVEVMLLLILTYLTLSLT 291 Query: 381 IALFMNRLNAKIALK 395 I+L MN N ++ +K Sbjct: 292 ISLTMNLFNRQVQIK 306 Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 53/164 (32%), Positives = 85/164 (51%) Query: 21 DMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYT 80 D R NI Q+I L V+ + N+ N+++ + LG FL ++A F I + ++ Y Sbjct: 11 DYRFWNIVAQLIAVSLAAVVVIILWGNLNRNLQQLGIQLGFDFLQQQASFGIGETLINYQ 70 Query: 81 SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140 +Y+ A+ VG VN+ +A G+ TI+G G RLS N LV I +YVE+FRN P Sbjct: 71 PTDTYSRALWVGLVNSLRVAVLGIFFTTIVGISAGIARLSDNWLVRKITTIYVEIFRNTP 130 Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMD 184 L+ + F Y +V P + I L + ++ G+ P ++ Sbjct: 131 LLLQLLFWYFAVFLGFPRREDKISLWGFLGISQDGIELPWFSLS 174 >gi|78779550|ref|YP_397662.1| amino acid ABC transporter permease [Prochlorococcus marinus str. MIT 9312] gi|78713049|gb|ABB50226.1| amino acid ABC transporter membrane protein 1, PAAT family [Prochlorococcus marinus str. MIT 9312] Length = 297 Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 99/347 (28%), Positives = 162/347 (46%), Gaps = 80/347 (23%) Query: 46 NNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMI 105 NN+ N+ ++ + +L++ A F + + +PY+ SYA A+ +G++N+ + S ++ Sbjct: 26 NNLIINLTRTGIGFNFNWLTKPASFSLAEHPLPYSPSDSYAWALFMGWMNSLKVIISSLV 85 Query: 106 PATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVL 165 A+ IGTL+G R+ N I Y+ V R P L+ + Y Sbjct: 86 LASFIGTLIGFLRVGKNSFFRIITAGYITVIRQTPLLIQLMCWY---------------- 129 Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225 F FL+ R SF L+ N + + LF LS F Sbjct: 130 -FVGFLSIRNNSFLNLSNVVN--------ISNKGIELFGLNLSSEFSA------------ 168 Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285 L+FGL F S +IA E++ Sbjct: 169 --LLFGLSI-------------------------------FSSAFIA----------EVI 185 Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345 R G+ +VP GQ EA +LG++ ++ +++PQA+ + IP LTSQYLNL KNS+LA+A+G Sbjct: 186 RGGIQSVPVGQWEAFRSLGISEKQGFIKIIIPQALPAFIPGLTSQYLNLAKNSTLAIAIG 245 Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 +AD+ ++ TIINQTG+A+E +I + +L L+++I M ++ I Sbjct: 246 YADIYAINDTIINQTGRAVECFMILLCSFLILNLVITKVMGIIDKSI 292 >gi|72382452|ref|YP_291807.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Prochlorococcus marinus str. NATL2A] gi|72002302|gb|AAZ58104.1| amino acid ABC transporter membrane protein 1, PAAT family [Prochlorococcus marinus str. NATL2A] Length = 299 Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 59/107 (55%), Positives = 84/107 (78%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G T S EF++L LS +T+A+IAE++R G+++V RGQ EA +LG++ RK ++LPQ Sbjct: 159 GLTFSSEFLALLFGLSIFTSAYIAEVIRGGILSVSRGQWEAFRSLGISERKGLIRIILPQ 218 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365 A+ +IIP LTSQYLNL KNS+LA+AVG++D+ ++ TIINQTG+AIE Sbjct: 219 ALPAIIPGLTSQYLNLAKNSTLAIAVGYSDIYAINDTIINQTGRAIE 265 Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 43/143 (30%), Positives = 77/143 (53%), Gaps = 3/143 (2%) Query: 45 VNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGM 104 +NN+ N+ ++ L +L + A F + + +PYTS SYA A+ +G++N+ + S + Sbjct: 25 INNLTINLIRTGLGFNFSWLFKPASFALAEHPLPYTSSDSYAWALFIGWLNSLKVIVSSL 84 Query: 105 IPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIV 164 I AT +GTL+G R N L+ I Y+ + R P L+ + F Y + L + D+ + Sbjct: 85 ILATFLGTLIGFARTGTNSLLGLISAGYITIIRQTPLLLQLMFWY--FVGFLGLKDNMFI 142 Query: 165 LPFGMF-LNNRGLSFPTLTMDTN 186 +F ++N+G+ F LT + Sbjct: 143 QIKNIFNISNKGIEFSGLTFSSE 165 >gi|124026133|ref|YP_001015249.1| amino acid ABC transporter permease [Prochlorococcus marinus str. NATL1A] gi|123961201|gb|ABM75984.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Prochlorococcus marinus str. NATL1A] Length = 299 Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 59/107 (55%), Positives = 84/107 (78%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G T S EF++L LS +T+A+IAE++R G+++V RGQ EA +LG++ RK ++LPQ Sbjct: 159 GLTFSSEFLALLFGLSIFTSAYIAEVIRGGILSVSRGQWEAFRSLGISERKGLIRIILPQ 218 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365 A+ +IIP LTSQYLNL KNS+LA+AVG++D+ ++ TIINQTG+AIE Sbjct: 219 ALPAIIPGLTSQYLNLAKNSTLAIAVGYSDIYAINDTIINQTGRAIE 265 Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 43/143 (30%), Positives = 76/143 (53%), Gaps = 3/143 (2%) Query: 45 VNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGM 104 +NN+ N+ ++ L +L + A F + + +PYTS SYA A+ +G++N+ + S + Sbjct: 25 INNLTINLIRTGLGFNFSWLFKPASFALAEHPLPYTSSDSYAWALFIGWLNSLKVIVSSL 84 Query: 105 IPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIV 164 I AT GTL+G R N L+ I Y+ + R P L+ + F Y + L + D+ + Sbjct: 85 ILATFFGTLIGFARTGTNSLLGLISAGYITIIRQTPLLLQLMFWY--FVGFLGLKDNMFI 142 Query: 165 LPFGMF-LNNRGLSFPTLTMDTN 186 +F ++N+G+ F LT + Sbjct: 143 QIKNIFNISNKGIEFSGLTFSSE 165 >gi|123966464|ref|YP_001011545.1| ABC transporter for amino acids, membrane component [Prochlorococcus marinus str. MIT 9515] gi|123200830|gb|ABM72438.1| ABC transporter for amino acids, membrane component [Prochlorococcus marinus str. MIT 9515] Length = 297 Score = 123 bits (308), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 61/138 (44%), Positives = 96/138 (69%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G S EF +L LS +++AFIAE++R G+ +VP GQ EA +LG++ ++ +++PQ Sbjct: 159 GLNFSSEFSALLFGLSIFSSAFIAEVIRGGIQSVPLGQWEAFRSLGISEKQGFIKIIIPQ 218 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378 A+ + IP LTSQYLNL KNS+LA+AVG++D+ ++ TIINQTG+A+E +I +F +L L+ Sbjct: 219 ALPAFIPGLTSQYLNLAKNSTLAIAVGYSDIYAINDTIINQTGRALECFIILLFSFLILN 278 Query: 379 IMIALFMNRLNAKIALKE 396 ++I M ++ I K Sbjct: 279 LLITKVMEIIDKSIMKKR 296 Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 30/105 (28%), Positives = 57/105 (54%) Query: 45 VNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGM 104 +NN+ N++++++ +L + A F + + +PY+ +YA AI +G++N+ + S + Sbjct: 25 INNLMINLKRTDIGFKFDWLIKPASFSLAEHSLPYSPSDNYAWAIFIGWMNSLKVIISSL 84 Query: 105 IPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 I AT +GTL+G R+ N Y+ V R P L+ + Y Sbjct: 85 ILATCLGTLIGFLRVGKNSFFRIFTAGYITVIRQTPLLIQLMCWY 129 >gi|33240125|ref|NP_875067.1| ABC-type amino acid transport system permease component [Prochlorococcus marinus subsp. marinus str. CCMP1375] gi|33237652|gb|AAP99719.1| ABC-type amino acid transport system permease component [Prochlorococcus marinus subsp. marinus str. CCMP1375] Length = 299 Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 66/134 (49%), Positives = 96/134 (71%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G +S EF +L + LS +T A+IAE+VR G+ +VPRGQ EA +LGL+ +++PQ Sbjct: 159 GINLSAEFSALLLGLSVFTGAYIAEVVRGGINSVPRGQWEAFKSLGLSDIHGLYKIIIPQ 218 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378 A+ +IIP LTSQYLNL KNS+LA+A+G+AD+ +V TIINQTG+AIE ++ + +L L+ Sbjct: 219 ALPAIIPGLTSQYLNLAKNSTLAIAIGYADIYAVNDTIINQTGRAIECFILLLLSFLFLN 278 Query: 379 IMIALFMNRLNAKI 392 I+I+ M +N I Sbjct: 279 IIISSLMEMVNKLI 292 Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 37/133 (27%), Positives = 69/133 (51%), Gaps = 3/133 (2%) Query: 46 NNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMI 105 NN+ N+ + L +L A F + + +P++ SYA A+ +G++N+ + F+ + Sbjct: 26 NNIIVNLYNTGLGFNYSWLLRPASFALAEHSLPFSPSDSYAWALFIGWLNSLKVIFASLF 85 Query: 106 PATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVL 165 AT IG VG R+ N L+ I Y+ + R P L+ + F Y + L + D +I Sbjct: 86 IATFIGFFVGIARIGTNILLNLISTGYITIIRQTPLLLQLMFWY--FVGFLGLKDKAIAP 143 Query: 166 PFGMF-LNNRGLS 177 G+ ++N+G++ Sbjct: 144 LRGILSISNQGIN 156 >gi|113955270|ref|YP_730399.1| polar amino acid ABC transporter permease [Synechococcus sp. CC9311] gi|113882621|gb|ABI47579.1| polar amino amino acid ABC transporter (PAAT) family, permease protein [Synechococcus sp. CC9311] Length = 299 Score = 120 bits (300), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 71/153 (46%), Positives = 96/153 (62%), Gaps = 8/153 (5%) Query: 217 KALPLLYISTFLIF----GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIA 272 + +PLL F F GLP+ L +H Q + G T+S EF ++ + Sbjct: 117 RQIPLLLQLLFWYFVAFLGLPSEPFAPLGAVIHLSN----QGISLLGVTLSVEFAAVLVG 172 Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 LS +T A IAE+VR GL +VPRGQ EA +LG+T R ++LPQA+ +I+P L+SQYL Sbjct: 173 LSVFTGASIAEVVRGGLDSVPRGQWEAFRSLGMTEGLGLRRIVLPQALPAILPALSSQYL 232 Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365 NL KNS+LA+AVG+ADL +V T I QTG+AIE Sbjct: 233 NLAKNSTLAIAVGYADLYAVSDTTITQTGRAIE 265 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 48/159 (30%), Positives = 86/159 (54%), Gaps = 5/159 (3%) Query: 30 QIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAI 89 Q+I+ L+L + +NN+ N+ ++ L L +L AGF + + +PY S A A+ Sbjct: 10 QLIIVLVLLTVMGILINNLAVNLIRTGLGLSFDWLWRPAGFALSEHPLPYQPSDSTAWAL 69 Query: 90 LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 L+G++N+ + +G++ AT++G GA R S N L+ + +YV R IP L+ + F Y Sbjct: 70 LMGWLNSLRVIVAGIVLATLLGVSTGAARRSLNPLLRQLAALYVGSIRQIPLLLQLLFWY 129 Query: 150 KSVLSVLPIPDHSIVLPFG--MFLNNRGLSFPTLTMDTN 186 ++ L +P P G + L+N+G+S +T+ Sbjct: 130 --FVAFLGLPSEPFA-PLGAVIHLSNQGISLLGVTLSVE 165 >gi|209528047|ref|ZP_03276527.1| polar amino acid ABC transporter, inner membrane subunit [Arthrospira maxima CS-328] gi|209491533|gb|EDZ91908.1| polar amino acid ABC transporter, inner membrane subunit [Arthrospira maxima CS-328] Length = 113 Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 58/104 (55%), Positives = 80/104 (76%) Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353 +GQ EAA +LGL RLV+ PQA+R IIPPL SQYLNL KNSSLA+AV +ADL +V Sbjct: 10 QGQWEAARSLGLKSGLVMRLVVFPQALRVIIPPLNSQYLNLAKNSSLAIAVAYADLYNVA 69 Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 T NQ+G+A+E++LI M YL+++++I+LFMN LN ++ L+E+ Sbjct: 70 NTTFNQSGRAVEVMLIIMAAYLTINLIISLFMNFLNRRVQLQER 113 >gi|116072942|ref|ZP_01470204.1| ABC transporter for amino acids, membrane component [Synechococcus sp. RS9916] gi|116068247|gb|EAU73999.1| ABC transporter for amino acids, membrane component [Synechococcus sp. RS9916] Length = 300 Score = 117 bits (294), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 61/107 (57%), Positives = 79/107 (73%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G +S EF ++ + LS +T A IAE+VR GL +VPRGQ EA +LGL+ R V+LPQ Sbjct: 160 GVHLSVEFTAVLLGLSVFTGASIAEVVRGGLDSVPRGQWEAFRSLGLSEAMGLRRVVLPQ 219 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365 A+ +I+P LTSQYLNL KNS+LA+AVG+ADL +V T I QTG+AIE Sbjct: 220 ALPAILPGLTSQYLNLAKNSTLAIAVGYADLYAVSDTTITQTGRAIE 266 Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 52/157 (33%), Positives = 88/157 (56%), Gaps = 5/157 (3%) Query: 23 RVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSD 82 R H +Q+ + ++L + +NN+ N+ ++ L L +LS AGF + + +PY S Sbjct: 4 RSHRWLLQLGIVVVLLTLTGVLINNLAVNLIRTGLGLSFEWLSRPAGFALAEHPLPYRSS 63 Query: 83 SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142 YA A+LVG++N+ + +G++ AT++G L GA R S N L+ + +YV + R +P L Sbjct: 64 DPYAWALLVGWLNSLKVILAGLVTATVLGVLAGAARRSINPLLRQLAALYVGLIRQVPLL 123 Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFG--MFLNNRGLS 177 + + F Y L LP + S P G + L N+G+S Sbjct: 124 LQLLFWYFVALLGLPRTNPS---PLGSLLTLTNQGIS 157 >gi|78213329|ref|YP_382108.1| amino acid ABC transporter permease [Synechococcus sp. CC9605] gi|78197788|gb|ABB35553.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Synechococcus sp. CC9605] Length = 296 Score = 117 bits (292), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 78/189 (41%), Positives = 106/189 (56%), Gaps = 17/189 (8%) Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIF----GLPTLV 236 A V + VLG+ + +RH G + +PLL F F GLP++ Sbjct: 80 AAGLVLATVLGVAAGAARSSSNRHLRSLGGGYVALIRQVPLLLQLLFWYFVAFLGLPSVP 139 Query: 237 LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296 + L + +LG +S EF ++ + L+ +T A IAEIVR G+ AVPRGQ Sbjct: 140 VGGLIRLSNQGIQLLGL-------NLSVEFCAVLVGLTVFTGASIAEIVRGGINAVPRGQ 192 Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356 EA +LGL R ++LPQA+ +I+P LTSQYLNL KNS+LA+AVG+ADL +V T Sbjct: 193 WEAFRSLGLGEGLGVRRIVLPQALPAILPALTSQYLNLAKNSTLAIAVGYADLYAVSDTT 252 Query: 357 INQTGQAIE 365 I QTG AIE Sbjct: 253 ITQTGHAIE 261 Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 48/167 (28%), Positives = 90/167 (53%), Gaps = 8/167 (4%) Query: 22 MRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTS 81 MR + VQ+ +A +L + +NN+ N+ ++ L LG G+L AGF + + +PY Sbjct: 1 MRQRRLLVQVGVAAVLIGLLALLINNLAVNLIRTGLGLGFGWLGRPAGFALAETALPYAP 60 Query: 82 DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141 SY A+ +G++N+ + +G++ AT++G GA R S+N+ + + YV + R +P Sbjct: 61 SDSYLWALTIGWLNSLKVIAAGLVLATVLGVAAGAARSSSNRHLRSLGGGYVALIRQVPL 120 Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFG--MFLNNRGLSFPTLTMDTN 186 L+ + F Y ++ L +P +P G + L+N+G+ L + Sbjct: 121 LLQLLFWY--FVAFLGLPS----VPVGGLIRLSNQGIQLLGLNLSVE 161 >gi|33863168|ref|NP_894728.1| ABC transporter for amino acids, membrane component [Prochlorococcus marinus str. MIT 9313] gi|33635085|emb|CAE21071.1| ABC transporter for amino acids, membrane component [Prochlorococcus marinus str. MIT 9313] Length = 297 Score = 117 bits (292), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 63/107 (58%), Positives = 79/107 (73%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G +S EF +L + LS +TAA IAEIVR GL +VP GQ EA +LGL R R V+LPQ Sbjct: 159 GLHLSVEFSALLVGLSVFTAASIAEIVRGGLNSVPSGQWEAFRSLGLPERFGLRRVVLPQ 218 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365 A+ +I+P LTSQYLNL KNS+LA+AVG+AD+ +V T I QTG+AIE Sbjct: 219 ALPAILPGLTSQYLNLAKNSTLAIAVGYADVYAVSDTTITQTGRAIE 265 Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 42/127 (33%), Positives = 70/127 (55%) Query: 23 RVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSD 82 R + +Q+ +AL L I +NN+ N+ ++++ L +L AGF + + + Y Sbjct: 3 RSQHFCLQVGVALALLTILGVLINNLAVNLIRTDMGLSFLWLGRPAGFALAEHPLSYRPS 62 Query: 83 SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142 SYA A+ +G++N+ + G+I AT+IG L GA R S N L+ + YV + R IP L Sbjct: 63 DSYAWALCMGWLNSLKVILCGLILATVIGVLAGAARSSRNLLLRAMSSGYVALIRQIPLL 122 Query: 143 VVIFFLY 149 + + F Y Sbjct: 123 LQLLFWY 129 >gi|159904019|ref|YP_001551363.1| ABC-type amino acid transport system, permease component [Prochlorococcus marinus str. MIT 9211] gi|159889195|gb|ABX09409.1| ABC-type amino acid transport system, permease component [Prochlorococcus marinus str. MIT 9211] Length = 297 Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 59/134 (44%), Positives = 93/134 (69%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G S EF +L + LS +T A+I+E+VR G+ +V +GQ EA +LGL+ V++PQ Sbjct: 158 GFNFSAEFSALLLGLSVFTGAYISEVVRGGIQSVAKGQWEAFRSLGLSETAGLYKVIMPQ 217 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378 A+ +I+P LTSQYLNL KNS+LA+AVG+AD+ ++ T+I QTG+A+E ++ + +L L+ Sbjct: 218 ALPAILPGLTSQYLNLAKNSTLAIAVGYADIYAISDTVITQTGRAVEGFILLLTGFLFLN 277 Query: 379 IMIALFMNRLNAKI 392 ++I+ M +N I Sbjct: 278 LIISNLMEIINTLI 291 Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 36/105 (34%), Positives = 60/105 (57%) Query: 45 VNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGM 104 +NN+ N+ ++ L + G+L AGF + + + Y+ SY AI +G++N+ + F+ + Sbjct: 25 INNLSVNLLRAGLGINFGWLLRPAGFALAEHSLKYSPSDSYLWAIFMGWLNSLKVIFASL 84 Query: 105 IPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 + ATIIG LVG R N L+ + YV + R IP L+ + F Y Sbjct: 85 LIATIIGFLVGIARTGNNILIGLLSSAYVSLIRQIPLLLQLMFWY 129 >gi|87124568|ref|ZP_01080417.1| ABC transporter for amino acids, membrane component [Synechococcus sp. RS9917] gi|86168140|gb|EAQ69398.1| ABC transporter for amino acids, membrane component [Synechococcus sp. RS9917] Length = 301 Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 60/107 (56%), Positives = 78/107 (72%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G +S EF ++ + LS ++ A IAE+VR GL AVPRGQ EA +LGL R V+LPQ Sbjct: 161 GVPLSVEFSAVLVGLSVFSGAAIAELVRGGLDAVPRGQWEAFRSLGLPEGLGLRRVILPQ 220 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365 A+ +I+P L+SQYLNL KNS+LA+AVG+ADL +V T I QTG+AIE Sbjct: 221 ALPAILPGLSSQYLNLAKNSTLAIAVGYADLYAVSDTTITQTGRAIE 267 Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 61/190 (32%), Positives = 98/190 (51%), Gaps = 7/190 (3%) Query: 45 VNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGM 104 VNN+ N+ ++ L L +LS AGF + + +PY SYA A+L+G++N+ + +G+ Sbjct: 25 VNNLTVNLIRTGLGLSFRWLSRPAGFALAEHPLPYAPSDSYAWALLMGWLNSLKVIVAGL 84 Query: 105 IPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY-KSVLSVLPIPDHSI 163 I AT++G GA R SAN L+ W+ +YV + R IP L+ + F Y + L + P + Sbjct: 85 ILATLLGVSAGAARRSANALLRWLAALYVGLIRQIPLLLQLLFWYFVAFLGLPPASEPLS 144 Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223 LP + L+N+G+ + + FS VL + LS+F+ A+P Sbjct: 145 PLPALLRLSNQGIELLGVPLSVE-----FSAVL-VGLSVFSGAAIAELVRGGLDAVPRGQ 198 Query: 224 ISTFLIFGLP 233 F GLP Sbjct: 199 WEAFRSLGLP 208 >gi|33865375|ref|NP_896934.1| ABC transporter for amino acids, membrane component [Synechococcus sp. WH 8102] gi|33632544|emb|CAE07356.1| ABC transporter for amino acids, membrane component [Synechococcus sp. WH 8102] Length = 296 Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 60/107 (56%), Positives = 77/107 (71%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G +S EF ++ L+ +T A IAEIVR G+ AVPRGQ EA +LGL R ++LPQ Sbjct: 155 GLNLSVEFCAVLTGLTVFTGASIAEIVRGGINAVPRGQWEAFRSLGLNEGLGLRRIVLPQ 214 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365 A+ +I+P LTSQYLNL KNS+LA+AVG+ADL +V T I QTG+AIE Sbjct: 215 ALPAILPALTSQYLNLAKNSTLAIAVGYADLYAVSDTTITQTGRAIE 261 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 42/136 (30%), Positives = 75/136 (55%), Gaps = 8/136 (5%) Query: 51 NMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATII 110 N+ ++ L LG G+LS AGF + + +PY SY A+ +G++N+ + +G++ AT++ Sbjct: 30 NLIRTGLGLGFGWLSRPAGFALAETALPYAPSDSYLWALTIGWLNSLKVILAGLVLATLL 89 Query: 111 GTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMF 170 G GA R S N+L+ + YV + R +P L+ + F Y ++ L +P +P G Sbjct: 90 GVAAGAARNSGNRLLRSLAGTYVALIRQVPLLLQLLFWY--FVAFLGLPS----MPVGGL 143 Query: 171 --LNNRGLSFPTLTMD 184 L+N+G+ L + Sbjct: 144 IQLSNQGIQLLGLNLS 159 >gi|78184423|ref|YP_376858.1| amino acid ABC transporter permease [Synechococcus sp. CC9902] gi|78168717|gb|ABB25814.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Synechococcus sp. CC9902] Length = 300 Score = 114 bits (285), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 78/188 (41%), Positives = 109/188 (57%), Gaps = 13/188 (6%) Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF- 246 K+ + +L L + A +R + ++L Y++ LI +P L+ + Y + F Sbjct: 81 KVILVGLLLATTLGV-AAGAARSSRNRLLRSLSGGYVA--LIRQVPLLLQLLFWYFVAFL 137 Query: 247 ---DKPVLGQFNFIG------GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQM 297 D PV G +F G +S EF S+ L +T A IAEIVR G+ AV RGQ Sbjct: 138 GLPDTPVGGLIHFSNQGIRLLGLNLSVEFCSVLTGLVVFTGASIAEIVRGGINAVSRGQW 197 Query: 298 EAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII 357 EA +LGL+ R ++LPQA+ +I+P LTSQYLNL KNS+LA+AVG+ADL +V T I Sbjct: 198 EAFRSLGLSEGLGLRRIVLPQALPAILPALTSQYLNLAKNSTLAIAVGYADLYAVSDTTI 257 Query: 358 NQTGQAIE 365 QTG+AIE Sbjct: 258 TQTGRAIE 265 Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 38/119 (31%), Positives = 67/119 (56%), Gaps = 2/119 (1%) Query: 45 VNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGM 104 +NN+ N+ ++ L L G+L AGF + + +PY SYA A+ +G++N+ + G+ Sbjct: 28 INNITVNLIRTGLGLDFGWLWRPAGFALAETALPYAPTDSYAWALTIGWLNSLKVILVGL 87 Query: 105 IPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSI 163 + AT +G GA R S N+L+ + YV + R +P L+ + F Y ++ L +PD + Sbjct: 88 LLATTLGVAAGAARSSRNRLLRSLSGGYVALIRQVPLLLQLLFWY--FVAFLGLPDTPV 144 >gi|124022921|ref|YP_001017228.1| amino acid ABC transporter permease [Prochlorococcus marinus str. MIT 9303] gi|123963207|gb|ABM77963.1| ABC transporter for amino acids, membrane component [Prochlorococcus marinus str. MIT 9303] Length = 297 Score = 114 bits (284), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 62/107 (57%), Positives = 78/107 (72%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G +S EF +L + LS +TAA IAEIVR GL +VP GQ EA +LGL R V+LPQ Sbjct: 159 GLNLSVEFSALLVGLSIFTAASIAEIVRGGLNSVPSGQWEAFRSLGLPEGFGLRRVVLPQ 218 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365 A+ +I+P LTSQYLNL KNS+LA+AVG+AD+ +V T I QTG+AIE Sbjct: 219 ALPAILPGLTSQYLNLAKNSTLAIAVGYADVYAVSDTTITQTGRAIE 265 Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 41/127 (32%), Positives = 71/127 (55%) Query: 23 RVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSD 82 R + +Q+ +AL L I +NN+ N+ ++++ L +L AGF + + + Y Sbjct: 3 RSQHFCLQVGVALALLTILGVLINNLAVNLIRTDMGLSFLWLGRPAGFALAEHPLSYRPS 62 Query: 83 SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142 SYA A+ +G++N+ + G++ AT+IG L GA R S+N L+ + YV + R IP L Sbjct: 63 DSYAWALCMGWLNSLKVILCGLVLATVIGVLAGAARSSSNLLLRALSSGYVALIRQIPLL 122 Query: 143 VVIFFLY 149 + + F Y Sbjct: 123 LQLLFWY 129 >gi|148239753|ref|YP_001225140.1| ABC-type amino acid transport system permease component [Synechococcus sp. WH 7803] gi|147848292|emb|CAK23843.1| ABC-type amino acid transport system permease component [Synechococcus sp. WH 7803] Length = 299 Score = 114 bits (284), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 78/192 (40%), Positives = 106/192 (55%), Gaps = 18/192 (9%) Query: 188 KIFVFSFVLGIVLSLFATRLSRH----FHEKTG------KALPLLYISTFLIF----GLP 233 ++ S L VL + A SR F G + +PLL F F GLP Sbjct: 78 RVIACSIALATVLGVVAGAASRSNNPLFSALAGLYVGLIRQIPLLLQLLFWYFVAFLGLP 137 Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293 + L L + Q + G +S EF ++ + LS +T A IAE+VR GL AVP Sbjct: 138 SEPLAPLGALIRISN----QSINVMGLNLSVEFAAVLVGLSVFTGASIAEVVRGGLDAVP 193 Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353 RGQ EA +LG+ + V+LPQA+ +I+P L+SQYLNL KNS+L++AVG+ADL +V Sbjct: 194 RGQWEAFRSLGIGEGLGLKSVVLPQALPAILPALSSQYLNLAKNSTLSIAVGYADLYAVS 253 Query: 354 GTIINQTGQAIE 365 T I QTG+AIE Sbjct: 254 DTAITQTGRAIE 265 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 34/105 (32%), Positives = 60/105 (57%) Query: 45 VNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGM 104 +NN+ N+ ++ L L +LS AGF I + ++P+ S A A+L+G++N+ + + Sbjct: 25 INNLTVNLIRTGLGLSFRWLSRPAGFAISEHLLPFQPSDSMAWALLMGWLNSLRVIACSI 84 Query: 105 IPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 AT++G + GA S N L + + +YV + R IP L+ + F Y Sbjct: 85 ALATVLGVVAGAASRSNNPLFSALAGLYVGLIRQIPLLLQLLFWY 129 >gi|88808789|ref|ZP_01124299.1| ABC transporter for amino acids, membrane component [Synechococcus sp. WH 7805] gi|88787777|gb|EAR18934.1| ABC transporter for amino acids, membrane component [Synechococcus sp. WH 7805] Length = 299 Score = 113 bits (282), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 76/184 (41%), Positives = 105/184 (57%), Gaps = 14/184 (7%) Query: 192 FSFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIF----GLPTLVLIALK 241 F+ VLG+V + + F G + +PLL F F GLP+ L L Sbjct: 86 FATVLGVVAGAASRSNNPLFSALAGLYVGLIRQIPLLLQLLFWYFVAFLGLPSEPLAPLG 145 Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301 + Q + G +S EF ++ + LS +T A IAE+VR GL AVPRGQ EA Sbjct: 146 ALIRVSN----QAITVMGLNLSVEFAAVLVGLSVFTGAAIAEVVRGGLDAVPRGQWEAFR 201 Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361 +LG+ + V+LPQA+ +I+P L+SQYLNL KNS+L++AVG+ADL +V T I QTG Sbjct: 202 SLGIGEGLGLQRVVLPQALPAILPALSSQYLNLAKNSTLSIAVGYADLYAVSDTAITQTG 261 Query: 362 QAIE 365 +AIE Sbjct: 262 RAIE 265 Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 34/105 (32%), Positives = 60/105 (57%) Query: 45 VNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGM 104 +NN+ N+ ++ L L +LS AGF I + ++P+ S A A+L+G++N+ + + Sbjct: 25 INNLTVNLIRTGLGLSFRWLSRPAGFAISEHLLPFQPGDSMAWALLMGWLNSLRVIACSI 84 Query: 105 IPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 AT++G + GA S N L + + +YV + R IP L+ + F Y Sbjct: 85 AFATVLGVVAGAASRSNNPLFSALAGLYVGLIRQIPLLLQLLFWY 129 >gi|260769396|ref|ZP_05878329.1| amino acid ABC transporter permease protein [Vibrio furnissii CIP 102972] gi|260614734|gb|EEX39920.1| amino acid ABC transporter permease protein [Vibrio furnissii CIP 102972] Length = 314 Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 69/206 (33%), Positives = 117/206 (56%), Gaps = 19/206 (9%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 +F+ +LG++ L R++++ +T + L L Y+ LI G P LV I + Y Sbjct: 128 IFAVLLGLIFGLM--RVAKN---QTARNLALTYVE--LIRGTPLLVQIFIVY-------- 172 Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 FIG F + +ALS +T A++AEIVR+G+ A+P GQMEAA +LG+T+ KA Sbjct: 173 ----FFIGTVLDFDRFTAGVVALSVFTGAYVAEIVRAGIQAIPNGQMEAARSLGMTYPKA 228 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370 R V+LPQA++ +PPL Q++NL+K+SSL + DL G +++ + E+ Sbjct: 229 MRYVILPQALKRTLPPLAGQFINLIKDSSLVSVISITDLTKAGREVVSGSFAPFEVWFTV 288 Query: 371 MFIYLSLSIMIALFMNRLNAKIALKE 396 +YL ++ ++ + RL +++ + Sbjct: 289 AALYLLVTGTLSWAIQRLEKRLSASD 314 >gi|315181927|gb|ADT88840.1| hypothetical amino acid ABC transporter, permease protein [Vibrio furnissii NCTC 11218] Length = 314 Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 69/206 (33%), Positives = 117/206 (56%), Gaps = 19/206 (9%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 +F+ +LG++ L R++++ +T + L L Y+ LI G P LV I + Y Sbjct: 128 IFAVLLGLIFGLM--RVAKN---QTARNLALTYVE--LIRGTPLLVQIFIVY-------- 172 Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 FIG F + +ALS +T A++AEIVR+G+ A+P GQMEAA +LG+T+ KA Sbjct: 173 ----FFIGTVLDFDRFTAGVVALSVFTGAYVAEIVRAGIQAIPNGQMEAARSLGMTYPKA 228 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370 R V+LPQA++ +PPL Q++NL+K+SSL + DL G +++ + E+ Sbjct: 229 MRYVILPQALKRTLPPLAGQFINLIKDSSLVSVISITDLTKAGREVVSGSFAPFEVWFTV 288 Query: 371 MFIYLSLSIMIALFMNRLNAKIALKE 396 +YL ++ ++ + RL +++ + Sbjct: 289 AALYLLVTGTLSWAIQRLEKRLSASD 314 >gi|116070917|ref|ZP_01468186.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Synechococcus sp. BL107] gi|116066322|gb|EAU72079.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Synechococcus sp. BL107] Length = 300 Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 76/188 (40%), Positives = 109/188 (57%), Gaps = 13/188 (6%) Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF- 246 K+ + +L L + A +R + ++L Y++ LI +P L+ + Y + F Sbjct: 81 KVILVGLLLATTLGV-AAGAARSSRNRLVRSLSGGYVA--LIRQVPLLLQLLFWYFVAFL 137 Query: 247 ---DKPVLGQFNFIG------GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQM 297 + PV G +F G +S EF ++ L +T A IAEIVR G+ AV RGQ Sbjct: 138 GLPETPVGGLIHFSNQGIRLLGLNLSVEFCAVLTGLVVFTGASIAEIVRGGINAVSRGQW 197 Query: 298 EAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII 357 EA +LGL+ R ++LPQA+ +I+P LTSQYLNL KNS+LA+AVG+ADL +V T I Sbjct: 198 EAFRSLGLSEGLGLRRIVLPQALPAILPALTSQYLNLAKNSTLAIAVGYADLYAVSDTTI 257 Query: 358 NQTGQAIE 365 QTG+AIE Sbjct: 258 TQTGRAIE 265 Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 36/105 (34%), Positives = 60/105 (57%) Query: 45 VNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGM 104 +NN+ N+ ++ L L G+L AGF + + +PY SYA A+ +G++N+ + G+ Sbjct: 28 INNITVNLIRTGLGLDFGWLWRPAGFALAETALPYAPTDSYAWALFIGWLNSLKVILVGL 87 Query: 105 IPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 + AT +G GA R S N+LV + YV + R +P L+ + F Y Sbjct: 88 LLATTLGVAAGAARSSRNRLVRSLSGGYVALIRQVPLLLQLLFWY 132 >gi|239909116|ref|YP_002955858.1| amino acid ABC transporter permease protein [Desulfovibrio magneticus RS-1] gi|239798983|dbj|BAH77972.1| amino acid ABC transporter permease protein [Desulfovibrio magneticus RS-1] Length = 247 Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 58/128 (45%), Positives = 84/128 (65%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 EF IAL+ YTAAFIAE +RSG+ ++P+ Q+EA+ A GL+ +A V+LPQA R II Sbjct: 114 EFACGVIALTVYTAAFIAEEIRSGIFSIPKNQLEASRACGLSFLQAMAYVILPQAFRVII 173 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 PPL SQ+LNL+KNSSL + +G DL + I T E + IYL++S++++L Sbjct: 174 PPLISQFLNLIKNSSLVMTIGVMDLTYMARQIEAHTFHGFEAFTVSTLIYLTISLIVSLG 233 Query: 385 MNRLNAKI 392 +N N ++ Sbjct: 234 VNLYNRRV 241 Score = 45.1 bits (105), Expect = 0.021, Method: Compositional matrix adjust. Identities = 31/93 (33%), Positives = 43/93 (46%), Gaps = 3/93 (3%) Query: 65 SERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKL 124 E ++ D G V Y IL G T ++ ++ + +GT++ RLS K Sbjct: 12 DESLAYQFDFGQV---VSGEYGQWILSGLGVTLQISGISIVLSLALGTVIAVLRLSKVKP 68 Query: 125 VAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLP 157 + W + E FRN P LV IFF Y SVLP Sbjct: 69 LVWFAASFTEFFRNTPLLVQIFFWYFGSYSVLP 101 >gi|260761547|ref|ZP_05873890.1| LOW QUALITY PROTEIN: polar amino acid ABC transporter [Brucella abortus bv. 2 str. 86/8/59] gi|260671979|gb|EEX58800.1| LOW QUALITY PROTEIN: polar amino acid ABC transporter [Brucella abortus bv. 2 str. 86/8/59] Length = 292 Score = 110 bits (275), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 54/99 (54%), Positives = 73/99 (73%) Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287 LI GLP L LIA + + FD P LG FN GG+ + PEF++L++ALS YTA+FIAE VR+ Sbjct: 148 LIIGLPILALIATGFPVSFDVPKLGTFNLTGGAQIKPEFLALFLALSFYTASFIAETVRA 207 Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326 G++ V +GQ EAA A+GL + RL+++PQA+R IIPP Sbjct: 208 GVLGVSKGQTEAAYAVGLRSGQTMRLIIVPQALRIIIPP 246 >gi|260754501|ref|ZP_05866849.1| LOW QUALITY PROTEIN: polar amino acid ABC transporter [Brucella abortus bv. 6 str. 870] gi|260674609|gb|EEX61430.1| LOW QUALITY PROTEIN: polar amino acid ABC transporter [Brucella abortus bv. 6 str. 870] Length = 280 Score = 110 bits (274), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 54/99 (54%), Positives = 73/99 (73%) Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287 LI GLP L LIA + + FD P LG FN GG+ + PEF++L++ALS YTA+FIAE VR+ Sbjct: 148 LIIGLPILALIATGFPVSFDVPKLGTFNLTGGAQIKPEFLALFLALSFYTASFIAETVRA 207 Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326 G++ V +GQ EAA A+GL + RL+++PQA+R IIPP Sbjct: 208 GVLGVSKGQTEAAYAVGLRSGQTMRLIIVPQALRIIIPP 246 >gi|242278993|ref|YP_002991122.1| polar amino acid ABC transporter inner membrane subunit [Desulfovibrio salexigens DSM 2638] gi|242121887|gb|ACS79583.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio salexigens DSM 2638] Length = 233 Score = 109 bits (273), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 58/133 (43%), Positives = 86/133 (64%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 EF + I+L+ YTAAF+AE +R+G+ ++P+ Q+EA+ A GL+ +A R V+LPQA R II Sbjct: 100 EFAAGVISLTVYTAAFVAEEIRAGINSIPKNQLEASRATGLSFLQAYRYVILPQAFRIII 159 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 PPL SQ LNL+KNSSL + +G DL + I + T E + IYL +S++++L Sbjct: 160 PPLISQSLNLIKNSSLVMTIGVMDLTYMARQIESYTFHGFEAFTVATVIYLCISLVVSLM 219 Query: 385 MNRLNAKIALKEK 397 +N N L+ K Sbjct: 220 INMYNKHFLLQIK 232 Score = 42.7 bits (99), Expect = 0.11, Method: Compositional matrix adjust. Identities = 24/74 (32%), Positives = 37/74 (50%) Query: 84 SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143 Y I+ G T ++ ++ ++GT+V R+S K W +VE FRN P L+ Sbjct: 14 QYGQWIIDGVKVTLQISAVSIVFTLLLGTIVAVMRMSKFKPFEWFSFAFVEFFRNTPLLI 73 Query: 144 VIFFLYKSVLSVLP 157 IFF Y ++LP Sbjct: 74 QIFFWYFGSYAILP 87 >gi|120601966|ref|YP_966366.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio vulgaris DP4] gi|120562195|gb|ABM27939.1| amino acid ABC transporter membrane protein 1, PAAT family [Desulfovibrio vulgaris DP4] Length = 237 Score = 109 bits (272), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 64/159 (40%), Positives = 91/159 (57%), Gaps = 14/159 (8%) Query: 247 DKPVLGQ--FNFIGGSTVSP------------EFMSLYIALSCYTAAFIAEIVRSGLIAV 292 + P+L Q F + G V P EF + I+L+ YTAAFIAE +RSG+ ++ Sbjct: 72 NTPLLVQIFFWYFGSDAVLPDAVNQWLYKQNFEFAAGVISLTVYTAAFIAEEIRSGIFSI 131 Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352 PR Q+EA+ A GL+ +A V+LPQA R I+PPL SQ LNL KNSSL + +G +L + Sbjct: 132 PRTQLEASRACGLSFMQAMSYVVLPQAFRIIVPPLISQALNLFKNSSLCMTIGVMELTYM 191 Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 I + T E + IYL +S+M++L +N N Sbjct: 192 ARQIESYTFHGFEAFTVSTLIYLCISLMVSLLINLYNTH 230 Score = 45.1 bits (105), Expect = 0.021, Method: Compositional matrix adjust. Identities = 26/69 (37%), Positives = 37/69 (53%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 I+ G + T L+ ++ A ++GTL+ RLS + W + E FRN P LV IFF Sbjct: 23 IVQGVITTCQLSGLSLVLAMLLGTLIAVMRLSGVRPFVWFSVAFTEFFRNTPLLVQIFFW 82 Query: 149 YKSVLSVLP 157 Y +VLP Sbjct: 83 YFGSDAVLP 91 >gi|260435752|ref|ZP_05789722.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Synechococcus sp. WH 8109] gi|260413626|gb|EEX06922.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Synechococcus sp. WH 8109] Length = 296 Score = 109 bits (272), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 60/107 (56%), Positives = 78/107 (72%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G +S EF ++ + L+ +T A IAEIVR G+ AVPRGQ EA +LGL R ++LPQ Sbjct: 155 GLNLSVEFCAVLVGLTVFTGASIAEIVRGGINAVPRGQWEAFRSLGLGEGLGLRRIVLPQ 214 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365 A+ +I+P LTSQYLNL KNS+LA+AVG+ADL +V T I QTG+AIE Sbjct: 215 ALPAILPALTSQYLNLAKNSTLAIAVGYADLYAVSDTTITQTGRAIE 261 Score = 44.7 bits (104), Expect = 0.027, Method: Compositional matrix adjust. Identities = 49/165 (29%), Positives = 87/165 (52%), Gaps = 8/165 (4%) Query: 22 MRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTS 81 MR + VQ+ +A +L VNN+ N+ ++ L LG G+L AGF + + +PY Sbjct: 1 MRQRRLLVQVGVAAVLLGFLALLVNNLAVNLIRTGLGLGFGWLGRPAGFALAETALPYAP 60 Query: 82 DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141 SY A+ +G++N+ + +G++ AT +G GA R N+L+ + YV + R +P Sbjct: 61 SDSYLWALTIGWLNSLKVIAAGLVLATGLGVAAGAARGGNNRLLRSLAGGYVALIRQVPL 120 Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFG--MFLNNRGLSFPTLTMD 184 L+ + F Y ++ L +P +P G + L+N+G+ L + Sbjct: 121 LLQLLFWY--FVAFLGLPS----MPIGGLIRLSNQGIQLLGLNLS 159 >gi|46580746|ref|YP_011554.1| amino acid ABC transporter permease [Desulfovibrio vulgaris str. Hildenborough] gi|46450166|gb|AAS96814.1| amino acid ABC transproter, permease protein, His/Glu/Gln/Arg/opine family [Desulfovibrio vulgaris str. Hildenborough] gi|311234460|gb|ADP87314.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio vulgaris RCH1] Length = 233 Score = 109 bits (272), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 64/159 (40%), Positives = 91/159 (57%), Gaps = 14/159 (8%) Query: 247 DKPVLGQ--FNFIGGSTVSP------------EFMSLYIALSCYTAAFIAEIVRSGLIAV 292 + P+L Q F + G V P EF + I+L+ YTAAFIAE +RSG+ ++ Sbjct: 68 NTPLLVQIFFWYFGSDAVLPDAVNQWLYKQNFEFAAGVISLTVYTAAFIAEEIRSGIFSI 127 Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352 PR Q+EA+ A GL+ +A V+LPQA R I+PPL SQ LNL KNSSL + +G +L + Sbjct: 128 PRTQLEASRACGLSFMQAMSYVVLPQAFRIIVPPLISQALNLFKNSSLCMTIGVMELTYM 187 Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 I + T E + IYL +S+M++L +N N Sbjct: 188 ARQIESYTFHGFEAFTVSTLIYLCISLMVSLLINLYNTH 226 Score = 44.7 bits (104), Expect = 0.024, Method: Compositional matrix adjust. Identities = 26/69 (37%), Positives = 37/69 (53%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 I+ G + T L+ ++ A ++GTL+ RLS + W + E FRN P LV IFF Sbjct: 19 IVQGVITTCQLSGLSLVLAMLLGTLIAVMRLSGVRPFVWFSVAFTEFFRNTPLLVQIFFW 78 Query: 149 YKSVLSVLP 157 Y +VLP Sbjct: 79 YFGSDAVLP 87 >gi|218888236|ref|YP_002437557.1| polar amino acid ABC transporter inner membrane protein [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218759190|gb|ACL10089.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 233 Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 63/157 (40%), Positives = 92/157 (58%), Gaps = 14/157 (8%) Query: 247 DKPVLGQ--FNFIGGSTVSP------------EFMSLYIALSCYTAAFIAEIVRSGLIAV 292 + P+L Q F + G V P EF + I+L+ YTAAFIAE +RSG+ ++ Sbjct: 68 NTPLLVQIFFWYFGSDAVLPTAVNQWLYKQNFEFAAGVISLAVYTAAFIAEEIRSGIFSI 127 Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352 PR Q+EA+ A GLT +A R V+LPQA R I+PPL SQ LNL KNSSL + +G +L + Sbjct: 128 PRTQLEASRACGLTFLQAMRYVVLPQAFRIIVPPLISQALNLFKNSSLCMTIGVMELTYM 187 Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 I + T E + IYL++S++++ + + N Sbjct: 188 ARQIESYTFHGFEAFTVSTLIYLTISLLVSFSITQYN 224 Score = 44.7 bits (104), Expect = 0.025, Method: Compositional matrix adjust. Identities = 28/76 (36%), Positives = 39/76 (51%) Query: 82 DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141 Y I+ G V T ++ ++ A +GTL+ RLSA + + W + E FRN P Sbjct: 12 SGEYLQWIIDGVVVTCQISALSLVLAMALGTLIAVMRLSAVRPLVWFSAGFTEFFRNTPL 71 Query: 142 LVVIFFLYKSVLSVLP 157 LV IFF Y +VLP Sbjct: 72 LVQIFFWYFGSDAVLP 87 >gi|167628827|ref|YP_001679326.1| glutamine abc transporter, permease protein [Heliobacterium modesticaldum Ice1] gi|167591567|gb|ABZ83315.1| glutamine abc transporter, permease protein [Heliobacterium modesticaldum Ice1] Length = 221 Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 72/214 (33%), Positives = 121/214 (56%), Gaps = 13/214 (6%) Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244 T K+ S ++G V+ LF L+R H + + + +Y T +I G P LV I + + Sbjct: 21 TTVKVTAISVMIGTVIGLFIA-LARLSHWRLLRWVAAIY--TDVIRGTPLLVQI---FIV 74 Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304 H P L IG S P S IALS + A++AEI R+G+ ++ +GQMEA+ +LG Sbjct: 75 HLGAPKL-----IGQSL--PAMTSGLIALSVNSGAYVAEIFRAGIQSIDKGQMEASRSLG 127 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364 +++ +A R V+LPQA R +IPPL ++++ +LK+SSL + +L G T++ T + Sbjct: 128 MSYGQAMRFVILPQAFRRVIPPLGNEFIAMLKDSSLVSVISLPELTMAGRTVLGSTARVW 187 Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 E L IYL+L+++ + + K+++K + Sbjct: 188 EAWLPVAAIYLTLTLLFSRLVAWYEQKLSVKSHR 221 Score = 38.5 bits (88), Expect = 1.7, Method: Compositional matrix adjust. Identities = 21/67 (31%), Positives = 34/67 (50%) Query: 83 SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142 YA L+G T + ++ T+IG + RLS +L+ W+ +Y +V R P L Sbjct: 9 QDYADLFLMGGWTTVKVTAISVMIGTVIGLFIALARLSHWRLLRWVAAIYTDVIRGTPLL 68 Query: 143 VVIFFLY 149 V IF ++ Sbjct: 69 VQIFIVH 75 >gi|258406274|ref|YP_003199016.1| polar amino acid ABC transporter, inner membrane subunit [Desulfohalobium retbaense DSM 5692] gi|257798501|gb|ACV69438.1| polar amino acid ABC transporter, inner membrane subunit [Desulfohalobium retbaense DSM 5692] Length = 233 Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 77/223 (34%), Positives = 120/223 (53%), Gaps = 39/223 (17%) Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALK 241 T+ +A V S V+G ++++F RLS K PL + S L Sbjct: 26 TLQISAVSIVLSLVVGTIIAVF--RLS--------KVKPLEWFS--------------LA 61 Query: 242 YQLHF-DKPVLGQ--FNFIGGSTVSPEFMSLY------------IALSCYTAAFIAEIVR 286 Y F + P+L Q F + G ++V P+F++ + IAL+ YT+AFIAE +R Sbjct: 62 YTEFFRNTPLLIQIFFWYFGSNSVLPQFVNEWLYEQNFEFAAGVIALTVYTSAFIAEEIR 121 Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346 SG+ ++P+ Q+E+A A GLT ++ R ++LPQA R IIPPL SQ+LNL KNSSL + +G Sbjct: 122 SGIFSIPKTQLESARASGLTFIQSMRFIILPQAYRIIIPPLISQFLNLTKNSSLVMTIGV 181 Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 DL + I + T E + +Y+ +S++I+ + N Sbjct: 182 MDLTYMARQIESYTFHGFEAFTVATVLYICISLVISFVVTMYN 224 Score = 49.7 bits (117), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 26/76 (34%), Positives = 39/76 (51%) Query: 82 DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141 Y I+ G + T ++ ++ + ++GT++ RLS K + W Y E FRN P Sbjct: 12 SGEYGEWIIQGLITTLQISAVSIVLSLVVGTIIAVFRLSKVKPLEWFSLAYTEFFRNTPL 71 Query: 142 LVVIFFLYKSVLSVLP 157 L+ IFF Y SVLP Sbjct: 72 LIQIFFWYFGSNSVLP 87 >gi|283853864|ref|ZP_06371080.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio sp. FW1012B] gi|283570739|gb|EFC18783.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio sp. FW1012B] Length = 233 Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 57/128 (44%), Positives = 83/128 (64%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 EF IAL+ YTAAFIAE +RSG+ ++P+ Q+EA+ A GL+ +A V+LPQA R II Sbjct: 100 EFACGVIALTVYTAAFIAEEIRSGIFSIPKNQLEASRACGLSFVQAMGYVILPQAFRVII 159 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 PPL SQ+LNL+KNSSL + +G DL + I T E + +YL++S+ ++L Sbjct: 160 PPLISQFLNLIKNSSLVMTIGVMDLTYMARQIEAHTFHGFEAFTVSTCMYLAISLTVSLG 219 Query: 385 MNRLNAKI 392 +N N ++ Sbjct: 220 VNIYNRRV 227 Score = 45.4 bits (106), Expect = 0.017, Method: Compositional matrix adjust. Identities = 27/76 (35%), Positives = 39/76 (51%) Query: 82 DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141 Y ++ G V T ++ ++ + +GTLV RLS + + WI + E FRN P Sbjct: 12 SGEYGQWLVSGLVTTLKISSLSIVLSLGLGTLVAVLRLSKVRPLVWISAGFTEFFRNTPL 71 Query: 142 LVVIFFLYKSVLSVLP 157 LV IFF Y S+LP Sbjct: 72 LVQIFFWYFGSYSILP 87 >gi|325284208|ref|YP_004256749.1| polar amino acid ABC transporter, inner membrane subunit [Deinococcus proteolyticus MRP] gi|324316017|gb|ADY27132.1| polar amino acid ABC transporter, inner membrane subunit [Deinococcus proteolyticus MRP] Length = 219 Score = 107 bits (266), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 75/221 (33%), Positives = 122/221 (55%), Gaps = 23/221 (10%) Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF---LIFGLPTLVL 237 LT+ A V +LG +L+L RLS PL +++T LI G P LV Sbjct: 19 LTLQVTAIALVAGTILGTLLAL--ARLS--------PIKPLAWLATAYIELIRGTPLLVQ 68 Query: 238 IALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQM 297 I L Y F P I G+ + P F + +A S +AA++AEI+RSG+ VPRGQ Sbjct: 69 IFLIY---FGLPQ------ITGTNLEP-FPAGVLAFSLNSAAYVAEIMRSGIQGVPRGQT 118 Query: 298 EAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII 357 EA+++LG + R R ++LPQA R ++PPL ++ LNLLKN+SL ++ +L G + Sbjct: 119 EASLSLGFSPRDTMRYIVLPQAFRRVLPPLVNEALNLLKNTSLLSSIALVELTRAGQIVA 178 Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 ++ + E+ L +YL+++++++ +RL + E++ Sbjct: 179 ARSYKPFEMYLAIALVYLAMTMVLSFLSSRLEKRWGEGERR 219 Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust. Identities = 24/61 (39%), Positives = 35/61 (57%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G V T + ++ TI+GTL+ RLS K +AW+ Y+E+ R P LV IF + Sbjct: 13 LLQGAVLTLQVTAIALVAGTILGTLLALARLSPIKPLAWLATAYIELIRGTPLLVQIFLI 72 Query: 149 Y 149 Y Sbjct: 73 Y 73 >gi|256829598|ref|YP_003158326.1| polar amino acid ABC transporter, inner membrane subunit [Desulfomicrobium baculatum DSM 4028] gi|256578774|gb|ACU89910.1| polar amino acid ABC transporter, inner membrane subunit [Desulfomicrobium baculatum DSM 4028] Length = 334 Score = 107 bits (266), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 78/213 (36%), Positives = 122/213 (57%), Gaps = 13/213 (6%) Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240 LT++ +A VF GI+L LF T L+R + + YI LI G P LV I L Sbjct: 131 LTLEVSALAIVF----GILLGLF-TGLARISDNPALRWGAIAYIE--LIRGSPLLVQIFL 183 Query: 241 KYQL--HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQME 298 Y + +L Q+ G + P + + +AL+ +T A+ AEIVR+G+ +V RGQME Sbjct: 184 WYFVVGTVINSMLSQY---GIGQIPPLWFGV-MALAIFTGAYTAEIVRAGIQSVHRGQME 239 Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN 358 AA +LG+T+ KA R V+LPQA R I+PPL Q+++L+K+SSL + +L +++ Sbjct: 240 AARSLGMTYNKAMRKVILPQAFRRILPPLAGQFISLVKDSSLLGVISIRELTKASREVVS 299 Query: 359 QTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 + Q EI ++ +YL L+ +++F+ L K Sbjct: 300 SSLQPFEIWIVCAILYLVLTFTLSMFVQYLERK 332 >gi|260881503|ref|ZP_05404565.2| glutamine ABC transporter, permease protein [Mitsuokella multacida DSM 20544] gi|260848606|gb|EEX68613.1| glutamine ABC transporter, permease protein [Mitsuokella multacida DSM 20544] Length = 221 Score = 107 bits (266), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 78/225 (34%), Positives = 123/225 (54%), Gaps = 19/225 (8%) Query: 177 SFPTLTMDTNA--KIFVFSFVLGIVLSLFA--TRLSRHFHEKTGKALPLLYISTFLIFGL 232 SFP L + KI S LG+V+ LF R+SR K + L +Y+ F G Sbjct: 11 SFPLLLVGAGVTIKITALSVALGVVIGLFVGIARISRI---KLLRVLAAIYVDFFR--GT 65 Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292 P LV I L Y F PV I G V P F++ + + A++AEI R+G+ ++ Sbjct: 66 PLLVQIFLVY---FALPV------ITGQRVDP-FVAAIGSCGINSGAYVAEIFRAGIQSI 115 Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352 +GQMEA +LG+T + R +++PQA + +IPPL ++++ LLK+SSL +GF +L Sbjct: 116 DKGQMEAGRSLGMTWVQTMRYIIVPQAFKRVIPPLGNEFIALLKDSSLVSVIGFEELTRR 175 Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 G II +T ++EI L IYL++++ I+ F+ L + ++ Sbjct: 176 GQLIIAKTYGSLEIWLSVAVIYLAMTLTISRFVAYLERRYKTDDR 220 Score = 37.0 bits (84), Expect = 5.5, Method: Compositional matrix adjust. Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 4/71 (5%) Query: 107 ATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLP 166 +IG VG R+S KL+ + +YV+ FR P LV IF +Y + LP+ V P Sbjct: 33 GVVIGLFVGIARISRIKLLRVLAAIYVDFFRGTPLLVQIFLVYFA----LPVITGQRVDP 88 Query: 167 FGMFLNNRGLS 177 F + + G++ Sbjct: 89 FVAAIGSCGIN 99 >gi|229010072|ref|ZP_04167286.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus mycoides DSM 2048] gi|228751205|gb|EEM01017.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus mycoides DSM 2048] Length = 218 Score = 106 bits (264), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 82/207 (39%), Positives = 126/207 (60%), Gaps = 25/207 (12%) Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252 SFVLGIV+++ R + G A Y+ + +P LVLIA + +F PV+G Sbjct: 32 SFVLGIVMAVMRISPIRILNW-IGSA----YVE--FVRNIP-LVLIAFIF--YFALPVIG 81 Query: 253 -QFN-FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 FN F+ G+ +AL+ YTAAFIAE++R+G+++V +GQMEAA + GLT+ +A Sbjct: 82 ITFNGFVAGT----------VALTVYTAAFIAEVIRAGILSVAKGQMEAARSSGLTYTQA 131 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI-ILI 369 V+LPQAM+ +IPPL +Q+LNL+KNSS+ + DL+ G I +T ++ I + Sbjct: 132 MYHVVLPQAMKIVIPPLGNQFLNLVKNSSILGIIAGTDLMYQGDLISTKTFVTFDVYIFV 191 Query: 370 WMFIYLSLSIMIALFMNRLNAKIALKE 396 MF YL L+I +++ + L ++A KE Sbjct: 192 GMF-YLVLTIPLSMLVRYLEKRLA-KE 216 Score = 36.2 bits (82), Expect = 9.2, Method: Compositional matrix adjust. Identities = 24/69 (34%), Positives = 39/69 (56%), Gaps = 1/69 (1%) Query: 90 LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 L GF T + +I + ++G ++ R+S +++ WI YVE RNI PLV+I F++ Sbjct: 15 LEGFKYTVMSSVVALIGSFVLGIVMAVMRISPIRILNWIGSAYVEFVRNI-PLVLIAFIF 73 Query: 150 KSVLSVLPI 158 L V+ I Sbjct: 74 YFALPVIGI 82 >gi|163938564|ref|YP_001643448.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus weihenstephanensis KBAB4] gi|229131584|ref|ZP_04260467.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus BDRD-ST196] gi|163860761|gb|ABY41820.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus weihenstephanensis KBAB4] gi|228651875|gb|EEL07829.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus BDRD-ST196] Length = 218 Score = 106 bits (264), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 82/207 (39%), Positives = 126/207 (60%), Gaps = 25/207 (12%) Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252 SFVLGIV+++ R + G A Y+ + +P LVLIA + +F PV+G Sbjct: 32 SFVLGIVMAVMRISPIRILNW-IGSA----YVE--FVRNIP-LVLIAFIF--YFALPVIG 81 Query: 253 -QFN-FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 FN F+ G+ +AL+ YTAAFIAE++R+G+++V +GQMEAA + GLT+ +A Sbjct: 82 ITFNGFVAGT----------VALTVYTAAFIAEVIRAGILSVAKGQMEAARSSGLTYTQA 131 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI-ILI 369 V+LPQAM+ +IPPL +Q+LNL+KNSS+ + DL+ G I +T ++ I + Sbjct: 132 MYHVVLPQAMKIVIPPLGNQFLNLVKNSSILGIIAGTDLMYQGDLISTKTFVTFDVYIFV 191 Query: 370 WMFIYLSLSIMIALFMNRLNAKIALKE 396 MF YL L+I +++ + L ++A KE Sbjct: 192 GMF-YLVLTIPLSMLVRYLEKRLA-KE 216 Score = 36.2 bits (82), Expect = 9.7, Method: Compositional matrix adjust. Identities = 24/69 (34%), Positives = 39/69 (56%), Gaps = 1/69 (1%) Query: 90 LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 L GF T + +I + ++G ++ R+S +++ WI YVE RNI PLV+I F++ Sbjct: 15 LEGFKYTVMSSVVALIGSFVLGIVMAVMRISPIRILNWIGSAYVEFVRNI-PLVLIAFIF 73 Query: 150 KSVLSVLPI 158 L V+ I Sbjct: 74 YFALPVIGI 82 >gi|229165584|ref|ZP_04293359.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus AH621] gi|228617891|gb|EEK74941.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus AH621] Length = 218 Score = 106 bits (264), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 70/165 (42%), Positives = 107/165 (64%), Gaps = 17/165 (10%) Query: 235 LVLIALKYQLHFDKPVLG-QFN-FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292 LVLIA + +F PV+G FN F+ G+ +AL+ YTAAFIAE++R+G+++V Sbjct: 66 LVLIAFIF--YFALPVIGITFNGFVAGT----------VALTVYTAAFIAEVIRAGILSV 113 Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352 +GQMEAA + GLT+ +A V+LPQAM+ +IPPL +Q+LNL+KNSS+ + DL+ Sbjct: 114 AKGQMEAARSSGLTYTQAMYHVVLPQAMKIVIPPLGNQFLNLVKNSSILGIIAGTDLMYQ 173 Query: 353 GGTIINQTGQAIEI-ILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 G I +T ++ I + MF YL L+I +++ + L ++A KE Sbjct: 174 GDLISTKTFVTFDVYIFVGMF-YLVLTIPLSMLVRYLEKRLA-KE 216 Score = 36.6 bits (83), Expect = 7.7, Method: Compositional matrix adjust. Identities = 24/69 (34%), Positives = 39/69 (56%), Gaps = 1/69 (1%) Query: 90 LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 L GF T + +I + ++G ++ R+S +++ WI YVE RNI PLV+I F++ Sbjct: 15 LEGFKYTVMSSVVALIGSFVLGIIMAVMRISPIRILNWIGSAYVEFVRNI-PLVLIAFIF 73 Query: 150 KSVLSVLPI 158 L V+ I Sbjct: 74 YFALPVIGI 82 >gi|242278994|ref|YP_002991123.1| polar amino acid ABC transporter inner membrane subunit [Desulfovibrio salexigens DSM 2638] gi|242121888|gb|ACS79584.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio salexigens DSM 2638] Length = 231 Score = 105 bits (263), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 73/207 (35%), Positives = 119/207 (57%), Gaps = 18/207 (8%) Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252 +F +G+ L RLSR+ + K + ++YI +I G+P L+LI + +F PV+ Sbjct: 40 AFWIGLAAGLM--RLSRN---RAVKTVSVIYIE--VIRGVPLLMLI---FWFYFLAPVV- 88 Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312 +G S PEF IA +T A+I EIV++G+IA+PRGQMEAA GL+H +A R Sbjct: 89 ----LGRSL--PEFHCALIAFIVFTGAYIGEIVKAGVIALPRGQMEAARGTGLSHVQAMR 142 Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA-IEIILIWM 371 V+LPQA+R++IP +Q+++L K++SLA +G +L + N+T A EI + Sbjct: 143 YVILPQALRNMIPSFVNQFVSLTKDTSLAYIIGVNELTRTATQVNNRTLSAPTEIFITIA 202 Query: 372 FIYLSLSIMIALFMNRLNAKIALKEKK 398 +Y + ++ R+ A +A + + Sbjct: 203 ILYFIVCYVLTWASRRMEAHMAKYQAR 229 Score = 38.1 bits (87), Expect = 2.4, Method: Compositional matrix adjust. Identities = 21/51 (41%), Positives = 30/51 (58%) Query: 99 LAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 LA G+ A IG G RLS N+ V + +Y+EV R +P L++IF+ Y Sbjct: 32 LALLGIFGAFWIGLAAGLMRLSRNRAVKTVSVIYIEVIRGVPLLMLIFWFY 82 >gi|320334507|ref|YP_004171218.1| polar amino acid ABC transporter inner membrane subunit [Deinococcus maricopensis DSM 21211] gi|319755796|gb|ADV67553.1| polar amino acid ABC transporter, inner membrane subunit [Deinococcus maricopensis DSM 21211] Length = 272 Score = 105 bits (263), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 59/132 (44%), Positives = 83/132 (62%) Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322 PE ++ ALS YT+++IAE +R+G+ ++P GQ EAA +LGL RLV+LPQA R Sbjct: 136 QPEQWAVIAALSVYTSSYIAETIRAGIQSIPHGQTEAAQSLGLGGLDTLRLVILPQAFRV 195 Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382 ++PPL SQ+LNL KNSSLA +G A+L G + + T + E I YL LS+ I Sbjct: 196 VLPPLGSQFLNLTKNSSLASQIGVAELFYYGTQVQSYTFRGFESITAITIAYLILSLAIT 255 Query: 383 LFMNRLNAKIAL 394 +N L A++ L Sbjct: 256 GLLNLLMARLHL 267 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 45/133 (33%), Positives = 66/133 (49%), Gaps = 10/133 (7%) Query: 25 HNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSS 84 + + Q+I LL + F + V V+ ++N++L + + + + Sbjct: 3 RDTTQQLIAGALLILAFGFIVWQVHAGFARNNVTLDWSIFGKPSQL----------TSGT 52 Query: 85 YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144 Y T IL+G T LA + A ++GT+VG RLSAN +V YVE FRN P LV Sbjct: 53 YLTTILIGMWLTVRLALISIALALLLGTVVGVARLSANPVVRTAASAYVEFFRNTPLLVQ 112 Query: 145 IFFLYKSVLSVLP 157 IFF VL+VLP Sbjct: 113 IFFWNFGVLNVLP 125 >gi|323498512|ref|ZP_08103505.1| polar amino acid ABC transporter inner membrane subunit [Vibrio sinaloensis DSM 21326] gi|323316401|gb|EGA69419.1| polar amino acid ABC transporter inner membrane subunit [Vibrio sinaloensis DSM 21326] Length = 315 Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 73/212 (34%), Positives = 113/212 (53%), Gaps = 15/212 (7%) Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244 T KI ++S V+ + L L L R K L ++YI +I G P LV I + Y Sbjct: 119 TTVKISLWSLVIALALGL-VIGLMRISSNPALKKLSIVYIE--IIRGTPLLVQIFIVY-- 173 Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304 FIG F + IALS +TAA++AEIVRSG+ ++P+GQMEAA +LG Sbjct: 174 ----------FFIGTVLDLERFTAGVIALSVFTAAYVAEIVRSGIQSIPKGQMEAARSLG 223 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364 + + KA V+LPQA + +PPL Q++NL+K+SSL + DL G +++ + Sbjct: 224 MNYPKAMIYVILPQAFKQTLPPLAGQFINLIKDSSLVSVISITDLTKAGREVVSGSFAPF 283 Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 E+ +YL L+ ++ + L ++A + Sbjct: 284 EVWFTVAALYLILTSGLSWAIQTLEKRLAASD 315 Score = 36.6 bits (83), Expect = 6.9, Method: Compositional matrix adjust. Identities = 20/61 (32%), Positives = 35/61 (57%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 IL G + T ++ ++ A +G ++G R+S+N + + VY+E+ R P LV IF + Sbjct: 113 ILEGVITTVKISLWSLVIALALGLVIGLMRISSNPALKKLSIVYIEIIRGTPLLVQIFIV 172 Query: 149 Y 149 Y Sbjct: 173 Y 173 >gi|229015971|ref|ZP_04172932.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus AH1273] gi|229022188|ref|ZP_04178738.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus AH1272] gi|228739119|gb|EEL89565.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus AH1272] gi|228745331|gb|EEL95372.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus AH1273] Length = 218 Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 70/165 (42%), Positives = 107/165 (64%), Gaps = 17/165 (10%) Query: 235 LVLIALKYQLHFDKPVLG-QFN-FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292 LVLIA + +F PV+G FN F+ G+ +AL+ YTAAFIAE++R+G+++V Sbjct: 66 LVLIAFIF--YFALPVIGITFNGFVAGT----------VALTVYTAAFIAEVIRAGILSV 113 Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352 +GQMEAA + GLT+ +A V+LPQAM+ +IPPL +Q+LNL+KNSS+ + DL+ Sbjct: 114 AKGQMEAARSSGLTYTQAMYHVVLPQAMKIVIPPLGNQFLNLVKNSSILGIIAGTDLMYQ 173 Query: 353 GGTIINQTGQAIEI-ILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 G I +T ++ I + MF YL L+I +++ + L ++A KE Sbjct: 174 GDLISTKTFVTFDVYIFVGMF-YLILTIPLSMLVRYLEKRLA-KE 216 >gi|170516838|gb|ACB15240.1| glutamine transport system permease protein GlnP [uncultured marine group II euryarchaeote DeepAnt-15E7] Length = 681 Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 57/148 (38%), Positives = 101/148 (68%), Gaps = 4/148 (2%) Query: 247 DKPVLGQFNFIGGS--TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304 D P G ++ G+ ++P F+++ + L+ +TA+ +AEIVR + A+PRGQ+EAAI++G Sbjct: 531 DAP--GSWDIAEGTGFEITPFFLAMMLGLTLFTASTVAEIVRGSIQALPRGQVEAAISVG 588 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364 L + RLV++PQA+RS++P L +Q++N+ KNSSLAV V ++D+ V ++N G+ I Sbjct: 589 LNPYQRLRLVIMPQALRSMVPLLNNQFMNVWKNSSLAVIVAYSDIFYVVLVMMNNVGKLI 648 Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKI 392 + L+ + Y + S+ I++ MN N+++ Sbjct: 649 PLFLLLLITYQAGSLAISVVMNWYNSRV 676 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 40/144 (27%), Positives = 73/144 (50%), Gaps = 12/144 (8%) Query: 50 NNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAIL-VGFVNTFWLAFSGMIPAT 108 N + ++ ++ F+ + F+I+ + ++S L +N+ + ++ Sbjct: 239 NPVMQNRWAVNFDFMDKVNTFKINPWPMEVVANSDARWLFLKAAIINSVRVTLLSIVLCV 298 Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIP---DHSIVL 165 I+GT+VG RLS+NKL + + VYVEVFRN+ PL V+ FL + L P + + + Sbjct: 299 ILGTIVGVTRLSSNKLASTMATVYVEVFRNL-PLAVLLFLISTQFG-LQAPLFIEETFLF 356 Query: 166 PFGMFLNNRGL------SFPTLTM 183 +F +N+G+ S+P L M Sbjct: 357 GGAVFYSNQGIWFVTVGSYPVLVM 380 >gi|332098821|gb|EGJ03778.1| general L-amino acid transport system permease protein aapQ [Shigella boydii 3594-74] Length = 155 Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 60/141 (42%), Positives = 84/141 (59%) Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229 FL+NRGL P+ + F+ + V+ IVLS+ R ++ + KTG+ + LI Sbjct: 8 FLSNRGLYIPSPQLGDGFIAFILAVVMAIVLSVGLFRFNKTYQIKTGQLRRTWPFAAVLI 67 Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289 GLP L LH+D P L FNF GG + PE +L +ALS YT+AFIAEI+R+G+ Sbjct: 68 IGLPLLAQWLFGAALHWDVPALRGFNFRGGMVLIPELAALTLALSVYTSAFIAEIIRAGI 127 Query: 290 IAVPRGQMEAAIALGLTHRKA 310 AVP GQ EAA +LGL + ++ Sbjct: 128 QAVPYGQHEAARSLGLRYARS 148 >gi|303246864|ref|ZP_07333141.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio fructosovorans JJ] gi|302491881|gb|EFL51761.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio fructosovorans JJ] Length = 233 Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 75/202 (37%), Positives = 112/202 (55%), Gaps = 11/202 (5%) Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS-TFLIFGLPTLVLIAL 240 T+ +A V S VLG ++++ RLS K PL++ S T+ F T +L+ + Sbjct: 26 TLKISAVSIVLSLVLGTLVAVM--RLS--------KVRPLVWASATYTEFFRNTPLLVQI 75 Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300 + VL QF EF IAL+ YT+AFIAE +RSG+ ++P+ Q+EA+ Sbjct: 76 FFWYFGSYNVLPQFVNDWLYKQDFEFACGVIALTVYTSAFIAEEIRSGVFSIPKNQLEAS 135 Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 A GL+ +A V+LPQA R IIPPL SQ+LNL+KNSSL + +G DL + I T Sbjct: 136 RACGLSFTQAMVYVILPQAFRVIIPPLISQFLNLIKNSSLVMTIGVMDLTYMARQIEAHT 195 Query: 361 GQAIEIILIWMFIYLSLSIMIA 382 E + +YL +S++++ Sbjct: 196 FHGFEAFTVTTCMYLCISLVVS 217 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 27/74 (36%), Positives = 39/74 (52%) Query: 84 SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143 Y ++ G V T ++ ++ + ++GTLV RLS + + W Y E FRN P LV Sbjct: 14 EYGQWLVTGLVTTLKISAVSIVLSLVLGTLVAVMRLSKVRPLVWASATYTEFFRNTPLLV 73 Query: 144 VIFFLYKSVLSVLP 157 IFF Y +VLP Sbjct: 74 QIFFWYFGSYNVLP 87 >gi|218887871|ref|YP_002437192.1| polar amino acid ABC transporter inner membrane protein [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218758825|gb|ACL09724.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 596 Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 55/131 (41%), Positives = 87/131 (66%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 EF I LS YTA+F+AE++R+GL ++P+G +EAA + GL++ + R ++LP A R+II Sbjct: 138 EFWCATIGLSIYTASFMAEVIRAGLQSIPKGLLEAAYSSGLSYFQVLRTIILPLAFRAII 197 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 PPL S++LN +KNSSLA+ VG A+L + + T + E +YLSLS++I+ Sbjct: 198 PPLGSEFLNNMKNSSLAMVVGVAELTWHAQQVESLTFKGFEATSAATVLYLSLSLIISFI 257 Query: 385 MNRLNAKIALK 395 +N +N ++ L Sbjct: 258 LNGVNGRMRLD 268 Score = 89.4 bits (220), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 73/232 (31%), Positives = 126/232 (54%), Gaps = 21/232 (9%) Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225 P MFL GL++ L + SF +G+ + + + +R F LLYI Sbjct: 380 PDEMFLGLGGLAYSLLMAVIAISV---SFFIGLAVGVGRSSSNRVFRIPC-----LLYIE 431 Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285 LI G P +++I + ++F PV+ G+T++ F S AL+ +T A+IAEIV Sbjct: 432 --LIRGNPLIIVI---FWVYFFIPVMF------GTTLN-VFWSATWALTAFTGAYIAEIV 479 Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345 R+G+ +P GQ+EAA + GLT+ +A R ++LPQA++ +IP + Q++ + K++SLA +G Sbjct: 480 RTGIQNIPAGQVEAAYSTGLTYLQAMRRIVLPQALKQMIPAIVGQFIAIFKDTSLAFVLG 539 Query: 346 FADLVSVGGTIINQTG-QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 +L V I N+ +EI F+Y +++F RL +++ ++ Sbjct: 540 VLELTFVAQGINNRLMIHPMEIYGTVAFLYFICCYSMSVFAARLERRLSPEK 591 Score = 37.4 bits (85), Expect = 4.4, Method: Compositional matrix adjust. Identities = 17/40 (42%), Positives = 27/40 (67%) Query: 110 IGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 IG VG GR S+N++ C +Y+E+ R P ++VIF++Y Sbjct: 407 IGLAVGVGRSSSNRVFRIPCLLYIELIRGNPLIIVIFWVY 446 Score = 36.6 bits (83), Expect = 7.1, Method: Compositional matrix adjust. Identities = 27/93 (29%), Positives = 47/93 (50%), Gaps = 5/93 (5%) Query: 69 GFEIDQGIVPYTSDSSYA----TAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKL 124 G+E ++ +T + +Y IL G NT ++ A ++GT++G RLS + Sbjct: 34 GYEFKWSML-FTRNETYGVVMGAEILKGLANTVRISLISSALALLLGTMLGLARLSLFRP 92 Query: 125 VAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLP 157 + +E FRN P L+ +FF Y + ++LP Sbjct: 93 LRVTATCVIEFFRNTPLLIQLFFWYFAFPAILP 125 >gi|58336907|ref|YP_193492.1| glutamine ABC transporter permease [Lactobacillus acidophilus NCFM] gi|227903465|ref|ZP_04021270.1| glutamine ABC superfamily ATP binding cassette transporter permease [Lactobacillus acidophilus ATCC 4796] gi|58254224|gb|AAV42461.1| glutamine ABC transporter permease [Lactobacillus acidophilus NCFM] gi|227868785|gb|EEJ76206.1| glutamine ABC superfamily ATP binding cassette transporter permease [Lactobacillus acidophilus ATCC 4796] Length = 213 Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 74/204 (36%), Positives = 116/204 (56%), Gaps = 20/204 (9%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 +FS +LG+V +L K G+ + +YI F +P LV++ + Y L + + Sbjct: 28 IFSLILGVVFALLEVA-----PPKFGRVIAKIYIEVFR--NIPLLVIVMIFY-LIVPRYI 79 Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 + F G+ I L+ YT+AFIAE VRSG+ ++ GQME A++ G+T+ +A Sbjct: 80 VKLSGFQAGT----------IGLTLYTSAFIAETVRSGINSIGEGQMEGALSNGMTYTQA 129 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSS-LAVAVGFADLVSVGGTIINQTGQAIEIILI 369 R V+LPQAM+ +IPPL +Q++NL+KNSS LA GF DL+ I T + I+ +I Sbjct: 130 MRYVILPQAMKIVIPPLGNQFVNLVKNSSVLAFVAGF-DLMYQAQLIAFSTFRTIDTYII 188 Query: 370 WMFIYLSLSIMIALFMNRLNAKIA 393 YL L++ ++ +M L K+A Sbjct: 189 VGLFYLILTMPLSYYMRHLEKKMA 212 Score = 38.5 bits (88), Expect = 1.8, Method: Compositional matrix adjust. Identities = 21/62 (33%), Positives = 34/62 (54%) Query: 88 AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147 + L GF NT + +I + I+G + ++ K I ++Y+EVFRNIP LV++ Sbjct: 11 SFLTGFWNTILCSIIALIFSLILGVVFALLEVAPPKFGRVIAKIYIEVFRNIPLLVIVMI 70 Query: 148 LY 149 Y Sbjct: 71 FY 72 >gi|302390115|ref|YP_003825936.1| amino acid ABC transporter membrane protein, PAAT family [Thermosediminibacter oceani DSM 16646] gi|302200743|gb|ADL08313.1| amino acid ABC transporter membrane protein, PAAT family [Thermosediminibacter oceani DSM 16646] Length = 220 Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 72/239 (30%), Positives = 120/239 (50%), Gaps = 25/239 (10%) Query: 160 DHSIVLPF-GMFLNNRGLSFPTLTMDTNAKIFVFSFV-LGIVLSLFATRLSRHFHEKTGK 217 D SIVLP+ +F + + IF+ +FV +G + +F + + + + Sbjct: 5 DFSIVLPYINLFFKGALTAIEITLLAVLIGIFIGTFVGMGKMSRVFILKFICSAYVEVIR 64 Query: 218 ALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT 277 PLL FGLP ++ G T+ PEF + +AL + Sbjct: 65 GTPLLVQLLIFYFGLPQIL----------------------GFTI-PEFTAAVLALGINS 101 Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 ++AEIVR G++AV RGQMEAA +LG++H +A R ++LPQA + +IPPL ++++ LLKN Sbjct: 102 GGYVAEIVRGGILAVDRGQMEAARSLGMSHAQAMRYIILPQAFKKMIPPLGNEFITLLKN 161 Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 SSLA +GF++L + T + E L Y +++ + + L ++A + Sbjct: 162 SSLATTIGFSELTRAAQIVAGNTYKPFEPYLTAAAFYFIMTLGFSWILGVLERRLAAGD 220 Score = 38.5 bits (88), Expect = 1.7, Method: Compositional matrix adjust. Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 2/55 (3%) Query: 110 IGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVL--PIPDHS 162 IGT VG G++S ++ +IC YVEV R P LV + Y + +L IP+ + Sbjct: 37 IGTFVGMGKMSRVFILKFICSAYVEVIRGTPLLVQLLIFYFGLPQILGFTIPEFT 91 >gi|193084367|gb|ACF10023.1| glutamine transport system permease protein glnP [uncultured marine group II euryarchaeote AD1000-18-D2] Length = 710 Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 57/148 (38%), Positives = 99/148 (66%), Gaps = 4/148 (2%) Query: 247 DKPVLGQFNFIGGS--TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304 D P G ++ G+ ++P F+++ + L+ +TA+ +AEIVR + A+PRGQ+EAAI+L Sbjct: 560 DAP--GSWDIAEGTGFEITPFFLAMMLGLTLFTASTVAEIVRGSIQALPRGQVEAAISLA 617 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364 L + RLV+LPQA+RS++P + +Q++N+ KNSSLAV V ++D+ V ++N G+ I Sbjct: 618 LNPFQRLRLVILPQALRSMVPLMNNQFMNVWKNSSLAVIVAYSDIFYVVLVMMNNVGKLI 677 Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKI 392 + ++ + Y + S+ I+L MN N ++ Sbjct: 678 PLFILLLITYQAGSLAISLVMNWYNTRV 705 Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust. Identities = 27/74 (36%), Positives = 45/74 (60%), Gaps = 1/74 (1%) Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPI-PDHSIVLPF 167 I+GT+VG RLS+NKL + + VYVE+FRN+P V++F + P+ + + Sbjct: 329 ILGTIVGVTRLSSNKLASTMATVYVEIFRNLPLAVLLFLIATQYGIQAPLFIEERFLFGG 388 Query: 168 GMFLNNRGLSFPTL 181 +F +N+G+ F T+ Sbjct: 389 AVFYSNQGIWFVTV 402 >gi|49476851|ref|YP_034899.1| glutamine ABC transporter permease [Bacillus thuringiensis serovar konkukian str. 97-27] gi|196035738|ref|ZP_03103141.1| amino acid ABC transporter, permease protein [Bacillus cereus W] gi|228932068|ref|ZP_04094960.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228944393|ref|ZP_04106766.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|49328407|gb|AAT59053.1| ABC transporter, permease; probable glutamine ABC transporter, permease [Bacillus thuringiensis serovar konkukian str. 97-27] gi|195991705|gb|EDX55670.1| amino acid ABC transporter, permease protein [Bacillus cereus W] gi|228815295|gb|EEM61543.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228827651|gb|EEM73393.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] Length = 218 Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 74/207 (35%), Positives = 123/207 (59%), Gaps = 25/207 (12%) Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252 SF+LG+VL++ R + ++ T L+ + + L+ + + +F PV+G Sbjct: 32 SFILGVVLAIMRIAPIRILN----------WLGTALVEFVRNIPLVLIAFIFYFALPVVG 81 Query: 253 -QFN-FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 N F+ G+ + L+ YTAAFIAE++R+G+++V +GQMEAA + GLT+ +A Sbjct: 82 ITLNGFVAGT----------VTLTVYTAAFIAEVIRAGILSVAKGQMEAARSSGLTYTQA 131 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI-ILI 369 V+LPQAM+ +IPPL +Q+LNL+KNSS+ + ADL+ G I +T ++ I + Sbjct: 132 MYHVVLPQAMKIVIPPLGNQFLNLVKNSSILGIIAGADLMYQGDLISTKTFVTFDVYIFV 191 Query: 370 WMFIYLSLSIMIALFMNRLNAKIALKE 396 MF YL L+I +++ + L ++A KE Sbjct: 192 GMF-YLILTIPLSMLVRYLEKRLA-KE 216 >gi|17546977|ref|NP_520379.1| amino acid ABC transporter transmembrane protein [Ralstonia solanacearum GMI1000] gi|17429278|emb|CAD15965.1| probable amino acid transmembrane abc transporter protein [Ralstonia solanacearum GMI1000] Length = 231 Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 74/210 (35%), Positives = 113/210 (53%), Gaps = 21/210 (10%) Query: 181 LTMDTNAKIFVFSFVLGIVLSLF------ATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234 L++ A FV + L I ++L R + + + +PLL F FG P Sbjct: 24 LSIKLTALAFVLALPLAIAVALLRLAPAAPLRAVGQAYVEAIRNVPLLAHMLFWYFGAPQ 83 Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294 L+ +++K L+ N+ S V IAL YTAA++AE +RSGL ++P+ Sbjct: 84 LLPMSVKTWLY-------NLNYEAASAV--------IALVLYTAAYMAEDIRSGLRSIPK 128 Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354 Q EA+ ALGL+ +A RLV+LPQ++R +PPL SQ LNL KNSS+A+ +G A+L+ Sbjct: 129 EQFEASRALGLSFLQAMRLVVLPQSLRVTVPPLVSQTLNLWKNSSIAMVIGVAELMYQAQ 188 Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALF 384 + + T + E YLS+S+ I +F Sbjct: 189 QVESATFRGFEAFAFATAAYLSISMAITVF 218 >gi|91224517|ref|ZP_01259779.1| hypothetical amino acid ABC transporter, permease protein [Vibrio alginolyticus 12G01] gi|269968272|ref|ZP_06182298.1| conserved hypothetical protein [Vibrio alginolyticus 40B] gi|91190859|gb|EAS77126.1| hypothetical amino acid ABC transporter, permease protein [Vibrio alginolyticus 12G01] gi|269827129|gb|EEZ81437.1| conserved hypothetical protein [Vibrio alginolyticus 40B] Length = 315 Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 68/182 (37%), Positives = 100/182 (54%), Gaps = 15/182 (8%) Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244 T KI ++S ++ + L L L R K L L+Y+ +I G P LV I + Y Sbjct: 119 TTIKISLWSLIIALALGL-VVGLMRISSNPALKKLALVYVE--VIRGTPLLVQIFIVY-- 173 Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304 FIG F + IALS +TAA++AEIVRSG+ ++PRGQMEAA +LG Sbjct: 174 ----------FFIGTVLDLERFTAGVIALSVFTAAYVAEIVRSGIQSIPRGQMEAARSLG 223 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364 + + KA V+LPQA + +PPL Q++NL+K+SSL + DL G +++ + Sbjct: 224 MNYPKAMIYVILPQAFKQTLPPLAGQFINLIKDSSLVSVISITDLTKAGREVVSGSFAPF 283 Query: 365 EI 366 E+ Sbjct: 284 EV 285 Score = 40.0 bits (92), Expect = 0.61, Method: Compositional matrix adjust. Identities = 25/61 (40%), Positives = 35/61 (57%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 IL G V T ++ +I A +G +VG R+S+N + + VYVEV R P LV IF + Sbjct: 113 ILDGVVTTIKISLWSLIIALALGLVVGLMRISSNPALKKLALVYVEVIRGTPLLVQIFIV 172 Query: 149 Y 149 Y Sbjct: 173 Y 173 >gi|258406150|ref|YP_003198892.1| polar amino acid ABC transporter, inner membrane subunit [Desulfohalobium retbaense DSM 5692] gi|257798377|gb|ACV69314.1| polar amino acid ABC transporter, inner membrane subunit [Desulfohalobium retbaense DSM 5692] Length = 598 Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 54/132 (40%), Positives = 89/132 (67%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 EF S + L+ YT++F+AE++R+G+ ++P+G +EAA + GLT+ +A R V+LP A R+II Sbjct: 140 EFWSATLGLAIYTSSFMAEVIRAGVQSIPKGLLEAAYSSGLTYFQALRTVILPLAFRAII 199 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 PPL S++LN +KNSSLA+ VG A+L I + T + E +YL LS+ I+ Sbjct: 200 PPLGSEFLNNMKNSSLAMVVGVAELTWQSQQIESLTFRGFEATTGATVLYLGLSLAISGL 259 Query: 385 MNRLNAKIALKE 396 +N +N ++ +++ Sbjct: 260 LNMINTRLRIED 271 Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 38/94 (40%), Positives = 59/94 (62%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F S IAL+ +T A+IAEIVR G+ +P GQ EAA GL + R ++LPQA++ +IP Sbjct: 462 FWSATIALTIFTGAYIAEIVRGGIQNIPPGQFEAAYGTGLGYWSTMRHIVLPQALKQMIP 521 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359 + Q++ + K++SLA +G +L V + N+ Sbjct: 522 AIVGQFIAIFKDTSLAFVIGVLELTFVAQGLNNR 555 Score = 43.1 bits (100), Expect = 0.074, Method: Compositional matrix adjust. Identities = 19/40 (47%), Positives = 29/40 (72%) Query: 110 IGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 IG +VG GR+S N+++ C VY+EV R P ++VIF++Y Sbjct: 409 IGLIVGLGRMSKNRILRLPCMVYIEVIRGNPLIIVIFWVY 448 Score = 40.0 bits (92), Expect = 0.59, Method: Compositional matrix adjust. Identities = 22/48 (45%), Positives = 28/48 (58%) Query: 110 IGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLP 157 +GT+ G GRLS+ K YVE FRN P LV +FF Y ++ LP Sbjct: 80 LGTVFGLGRLSSFKPFYLFSTWYVEFFRNTPLLVQLFFWYFALPKALP 127 >gi|227530174|ref|ZP_03960223.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus vaginalis ATCC 49540] gi|227349927|gb|EEJ40218.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus vaginalis ATCC 49540] Length = 212 Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 58/124 (46%), Positives = 83/124 (66%), Gaps = 2/124 (1%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I L+ YT+AFIAE VR+G+ +V GQ+E A+A GLTH +A R ++LPQA R +IPPL +Q Sbjct: 90 IGLTLYTSAFIAETVRAGINSVEGGQLEGALANGLTHGQAMRYIILPQAFRVVIPPLGNQ 149 Query: 331 YLNLLKNSS-LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 ++NL+KNSS LA GF DL+ G I N T Q + I +YL +++ ++ +M L Sbjct: 150 FINLVKNSSVLAFVAGF-DLMYEGNLIANDTLQTMPTYFIVGVLYLIITLPLSYYMRHLE 208 Query: 390 AKIA 393 K+A Sbjct: 209 KKLA 212 Score = 39.3 bits (90), Expect = 1.0, Method: Compositional matrix adjust. Identities = 25/62 (40%), Positives = 35/62 (56%), Gaps = 2/62 (3%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI--F 146 +L G NT + ++ + IIGT +S ++V I +YVEVFRNIP LV+ F Sbjct: 12 LLSGLWNTILCSLIALVGSLIIGTFFALLEISKYRIVRLIGSIYVEVFRNIPLLVIAMGF 71 Query: 147 FL 148 FL Sbjct: 72 FL 73 >gi|300703461|ref|YP_003745063.1| amino acid transmembrane ABC transporter protein [Ralstonia solanacearum CFBP2957] gi|299071124|emb|CBJ42436.1| putative amino acid transmembrane abc transporter protein [Ralstonia solanacearum CFBP2957] Length = 231 Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 74/210 (35%), Positives = 114/210 (54%), Gaps = 21/210 (10%) Query: 181 LTMDTNAKIFVFSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIFGLPT 234 L++ + FV + LGIV++L R + + + +PLL F FG P Sbjct: 24 LSIKLSVLAFVLALPLGIVVALLRMAPSAPLRAIGQAYVEAIRNVPLLAHMLFWYFGAPQ 83 Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294 L+ A++ L+ N+ S V IAL YTAA++AE +RSGL ++P+ Sbjct: 84 LLPNAIRTWLY-------DLNYEAASAV--------IALVLYTAAYMAEDIRSGLRSIPK 128 Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354 Q+EA+ ALGL+ +A R V+LPQ++R +PPL SQ LNL KNSS+A+ +G A+L+ Sbjct: 129 EQLEASRALGLSFLQAMRRVILPQSLRVTVPPLVSQTLNLWKNSSIAMVIGVAELMYEAQ 188 Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALF 384 + + T + E YL++SI I +F Sbjct: 189 QVESATFRGFEAFAFATAAYLTISIAITVF 218 >gi|78356475|ref|YP_387924.1| amino acid ABC transporter permease [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78218880|gb|ABB38229.1| amino acid ABC transporter membrane protein 1, PAAT family [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 233 Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 53/125 (42%), Positives = 83/125 (66%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 EF + IAL+ YTAAFIAE +RSG+ A+P+ Q+E++ A GL+ ++ R V+LPQA R I+ Sbjct: 100 EFAAGVIALTVYTAAFIAEEIRSGINAIPKTQLESSRACGLSFLQSMRYVILPQAFRIIV 159 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 PPL SQ LNL+KNSSL + +G A+L + + + T + E + +YL +S+ ++ Sbjct: 160 PPLISQALNLIKNSSLCMTIGVAELTYMTRQVESYTFRGFEAFTVATLVYLCISLAVSFT 219 Query: 385 MNRLN 389 + + N Sbjct: 220 VTQYN 224 Score = 39.7 bits (91), Expect = 0.84, Method: Compositional matrix adjust. Identities = 25/76 (32%), Positives = 37/76 (48%) Query: 84 SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143 Y I+ G + T ++ + A ++GT++ RLS + W + E FRN P LV Sbjct: 14 EYREWIIDGVLLTLKISAVSLFLALVLGTVIAVMRLSRIRPFVWFSAGFTEFFRNTPLLV 73 Query: 144 VIFFLYKSVLSVLPIP 159 IFF Y +LP P Sbjct: 74 QIFFWYFGSDGLLPRP 89 >gi|299066139|emb|CBJ37322.1| putative amino acid transmembrane abc transporter protein [Ralstonia solanacearum CMR15] Length = 231 Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 74/210 (35%), Positives = 113/210 (53%), Gaps = 21/210 (10%) Query: 181 LTMDTNAKIFVFSFVLGIVLSLF------ATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234 L++ A FV + L I ++L R + + + +PLL F FG P Sbjct: 24 LSIKLTALAFVLALPLAIAVALLRLAPAAPLRAIGQTYVEAIRNVPLLAHMLFWYFGAPQ 83 Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294 L+ +++K L+ N+ S V IAL YTAA++AE +RSGL ++P+ Sbjct: 84 LLPMSVKTWLY-------NLNYEAASAV--------IALVLYTAAYMAEDIRSGLRSIPK 128 Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354 Q EA+ ALGL+ +A RLV+LPQ++R +PPL SQ LNL KNSS+A+ +G A+L+ Sbjct: 129 EQFEASRALGLSFLQAMRLVVLPQSLRVTVPPLVSQTLNLWKNSSIAMVIGVAELMYQAQ 188 Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALF 384 + + T + E YLS+S+ I +F Sbjct: 189 QVESATFRGFEAFAFATAAYLSISMAITVF 218 >gi|317153799|ref|YP_004121847.1| polar amino acid ABC transporter inner membrane subunit [Desulfovibrio aespoeensis Aspo-2] gi|316944050|gb|ADU63101.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio aespoeensis Aspo-2] Length = 255 Score = 103 bits (258), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 53/133 (39%), Positives = 87/133 (65%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 EFM+ IAL+ YT+AFIAE +R+G+ ++P+ Q+EA+ A+GL+ +A R V+LPQA+R +I Sbjct: 122 EFMTGVIALTVYTSAFIAEEIRAGIFSIPKTQIEASRAVGLSFTQAYRYVILPQALRIVI 181 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 PPL SQ LNL+KNSSL + +G +L+ + + + G E + IYL +S+ ++ Sbjct: 182 PPLISQSLNLIKNSSLCMVIGVTELMFMARQVESYHGAPFEAFSAALLIYLVISLFVSFG 241 Query: 385 MNRLNAKIALKEK 397 + N ++ + Sbjct: 242 ITMYNKHFLIQVR 254 Score = 45.8 bits (107), Expect = 0.013, Method: Compositional matrix adjust. Identities = 26/72 (36%), Positives = 38/72 (52%) Query: 86 ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145 A + G V T +A ++ A ++G ++ R++ KL+ W Y E FRN P LV I Sbjct: 16 AQWMWEGLVTTMQIATISLLCAMLLGIVICVFRMTPFKLLQWFSLAYTEFFRNTPLLVQI 75 Query: 146 FFLYKSVLSVLP 157 FF Y + VLP Sbjct: 76 FFWYNASHFVLP 87 >gi|207723709|ref|YP_002254107.1| amino acid transmembrane protein [Ralstonia solanacearum MolK2] gi|206588913|emb|CAQ35875.1| amino acid transmembrane protein [Ralstonia solanacearum MolK2] Length = 231 Score = 103 bits (258), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 74/210 (35%), Positives = 114/210 (54%), Gaps = 21/210 (10%) Query: 181 LTMDTNAKIFVFSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIFGLPT 234 L++ + FV + LGIV++L R + + + +PLL F FG P Sbjct: 24 LSIKLSVLAFVLALPLGIVVALLRMAPSAPLRAIGQTYVEAIRNVPLLAHMLFWYFGAPQ 83 Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294 L+ A++ L+ N+ S V IAL YTAA++AE +RSGL ++P+ Sbjct: 84 LLPNAVRTWLY-------DLNYEAASAV--------IALVLYTAAYMAEDIRSGLRSIPK 128 Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354 Q+EA+ ALGL+ +A R V+LPQ++R +PPL SQ LNL KNSS+A+ +G A+L+ Sbjct: 129 EQLEASRALGLSFLQAMRRVILPQSLRVTVPPLVSQTLNLWKNSSIAMVIGVAELMYQAQ 188 Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALF 384 + + T + E YL++SI I +F Sbjct: 189 QVESATFRGFEAFAFATAAYLTISIAITVF 218 >gi|83746552|ref|ZP_00943603.1| GlnP [Ralstonia solanacearum UW551] gi|207743862|ref|YP_002260254.1| amino acid transmembrane protein [Ralstonia solanacearum IPO1609] gi|83726883|gb|EAP74010.1| GlnP [Ralstonia solanacearum UW551] gi|206595262|emb|CAQ62189.1| amino acid transmembrane protein [Ralstonia solanacearum IPO1609] Length = 231 Score = 103 bits (257), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 76/211 (36%), Positives = 114/211 (54%), Gaps = 23/211 (10%) Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKA-------LPLLYISTFLIFGLP 233 L++ + FV + LGIV++L S G+A +PLL F FG P Sbjct: 24 LSIKLSVLAFVLALPLGIVVALLRMAPSAPL-RAIGQAFVEAIRNVPLLAHMLFWYFGAP 82 Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293 L+ A++ L+ N+ S V IAL YTAA++AE +RSGL ++P Sbjct: 83 QLLPNAVRTWLY-------DLNYEAASAV--------IALVLYTAAYMAEDIRSGLRSIP 127 Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353 + Q+EA+ ALGL+ +A R V+LPQ++R +PPL SQ LNL KNSS+A+ +G A+L+ Sbjct: 128 KEQLEASRALGLSFLQAMRRVILPQSLRVTVPPLVSQTLNLWKNSSIAMVIGVAELMYEA 187 Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 + + T + E YL++SI I +F Sbjct: 188 QQVESATFRGFEAFAFATAAYLTISIAITVF 218 >gi|116512613|ref|YP_811520.1| amino acid ABC transporter permease/periplasmic protein [Lactococcus lactis subsp. cremoris SK11] gi|116108267|gb|ABJ73407.1| amino acid ABC transporter membrane protein, PAAT family / amino acid ABC transporter substrate-binding protein, PAAT family [Lactococcus lactis subsp. cremoris SK11] Length = 714 Score = 103 bits (257), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 70/222 (31%), Positives = 121/222 (54%), Gaps = 35/222 (15%) Query: 167 FGMFLNN-----RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR------HFHEKT 215 FG+ NN RGL +T++ F+ + ++GI+ LF+ S+ + Sbjct: 497 FGILQNNWEQIGRGL---LVTLELAVLSFILAMIVGIIFGLFSVAPSKILRTIARIYVDL 553 Query: 216 GKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP--EFMSLYIAL 273 +++PLL ++ F+ +G+P L+ I +Q SP EF + IAL Sbjct: 554 NRSIPLLVLTIFIFYGIPNLLQIITGHQ-------------------SPLNEFTAGVIAL 594 Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333 + ++A+IAEIVRSG+ AVP GQMEA+ +LG+T+ + R V+LPQA++ IP L +Q++ Sbjct: 595 TLNSSAYIAEIVRSGVQAVPSGQMEASRSLGVTYLTSMRKVILPQAIKITIPSLINQFII 654 Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375 LK+++L +G +L+ G I+ + QA + + +Y+ Sbjct: 655 TLKDTTLVSVIGLVELLQTGQIIVARNFQAFRVYGLIGLVYM 696 >gi|125624721|ref|YP_001033204.1| glutamine ABC transporter permease and substrate binding protein [Lactococcus lactis subsp. cremoris MG1363] gi|62421458|gb|AAX82492.1| GlnP [Lactococcus lactis subsp. cremoris MG1363] gi|124493529|emb|CAL98510.1| glutamine ABC transporter permease and substrate binding protein [Lactococcus lactis subsp. cremoris MG1363] gi|300071518|gb|ADJ60918.1| glutamine ABC transporter permease and substrate binding protein [Lactococcus lactis subsp. cremoris NZ9000] Length = 714 Score = 103 bits (257), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 70/222 (31%), Positives = 121/222 (54%), Gaps = 35/222 (15%) Query: 167 FGMFLNN-----RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR------HFHEKT 215 FG+ NN RGL +T++ F+ + ++GI+ LF+ S+ + Sbjct: 497 FGILQNNWEQIGRGL---LVTLELAVLSFILAMIVGIIFGLFSVAPSKILRTIARIYVDL 553 Query: 216 GKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP--EFMSLYIAL 273 +++PLL ++ F+ +G+P L+ I +Q SP EF + IAL Sbjct: 554 NRSIPLLVLTIFIFYGIPNLLQIITGHQ-------------------SPLNEFTAGVIAL 594 Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333 + ++A+IAEIVRSG+ AVP GQMEA+ +LG+T+ + R V+LPQA++ IP L +Q++ Sbjct: 595 TLNSSAYIAEIVRSGVQAVPSGQMEASRSLGVTYLTSMRKVILPQAIKITIPSLINQFII 654 Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375 LK+++L +G +L+ G I+ + QA + + +Y+ Sbjct: 655 TLKDTTLVSVIGLVELLQTGQIIVARNFQAFRVYGLIGLVYM 696 >gi|90413902|ref|ZP_01221888.1| hypothetical amino acid ABC transporter, permease protein [Photobacterium profundum 3TCK] gi|90325086|gb|EAS41596.1| hypothetical amino acid ABC transporter, permease protein [Photobacterium profundum 3TCK] Length = 315 Score = 103 bits (257), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 69/209 (33%), Positives = 110/209 (52%), Gaps = 15/209 (7%) Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247 KI V S +++ L A L R + K L LY+ +I G P LV I + Y Sbjct: 122 KISVISLFFAVIIGLVAG-LMRISNNPVTKNLSFLYVE--IIRGTPLLVQIFIVY----- 173 Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307 F+G F + +ALS +T A+IAEI+RSG+ ++P GQMEAA +LG+ + Sbjct: 174 -------FFLGTIFDLERFTAGVVALSVFTGAYIAEIIRSGIQSIPPGQMEAARSLGMNY 226 Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367 KA V+LPQA + +PP+ Q + L+K+SSL + DL G +I+ + E+ Sbjct: 227 PKAMAYVILPQAFKRTLPPMAGQLITLIKDSSLVSVISITDLTKAGREVISGSFATFEVW 286 Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIALKE 396 + +YL L+I ++ + R+ ++A + Sbjct: 287 FVVAGLYLLLTISLSWVVQRIEKRLASSD 315 >gi|193084291|gb|ACF09950.1| glutamine transport system permease protein glnP [uncultured marine group II euryarchaeote KM3-130-D10] Length = 709 Score = 103 bits (257), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 56/148 (37%), Positives = 99/148 (66%), Gaps = 4/148 (2%) Query: 247 DKPVLGQFNFIGGS--TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304 D P G ++ G+ ++P F+++ + L+ +TA+ +AEIVR + A+P+GQ+EAAI+L Sbjct: 559 DSP--GSWDIAEGTGFEITPFFLAMMLGLTLFTASTVAEIVRGSIQALPKGQVEAAISLA 616 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364 L + RLV+LPQA+RS++P + +Q++N+ KNSSLAV V ++D+ V ++N G+ I Sbjct: 617 LNPFQRLRLVILPQALRSMVPLMNNQFMNVWKNSSLAVIVAYSDIFYVVLVMMNNVGKLI 676 Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKI 392 + ++ + Y + S+ I+L MN N ++ Sbjct: 677 PLFILLLITYQAGSLAISLVMNWYNTRV 704 Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 28/74 (37%), Positives = 46/74 (62%), Gaps = 1/74 (1%) Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPI-PDHSIVLPF 167 I+GT+VG RLS+NKL + + VYVE+FRN+P V++F + P+ D + + Sbjct: 328 ILGTIVGVTRLSSNKLASTMATVYVEIFRNLPLAVLLFLIATQYGIQAPLFIDETFLFGG 387 Query: 168 GMFLNNRGLSFPTL 181 +F +N+G+ F T+ Sbjct: 388 AVFYSNQGIWFVTV 401 >gi|65318067|ref|ZP_00391026.1| COG0765: ABC-type amino acid transport system, permease component [Bacillus anthracis str. A2012] Length = 218 Score = 103 bits (257), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 72/207 (34%), Positives = 121/207 (58%), Gaps = 25/207 (12%) Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252 SF+LG+VL++ R + ++ T + + + L+ + + +F PV+G Sbjct: 32 SFILGVVLAIMRIAPIRILN----------WLGTAFVEFVRNIPLVLIAFIFYFALPVVG 81 Query: 253 --QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 F+ G+ + L+ YTAAFIAE++R+G+++V +GQMEAA + GLT+ +A Sbjct: 82 ITXNGFVAGT----------VTLTVYTAAFIAEVIRAGILSVAKGQMEAARSSGLTYTQA 131 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI-ILI 369 V+LPQAM+ +IPPL +Q+LNL+KNSS+ + ADL+ G I +T ++ I + Sbjct: 132 MYHVVLPQAMKIVIPPLGNQFLNLVKNSSILGIIAGADLMYQGDLISTKTFVTFDVYIFV 191 Query: 370 WMFIYLSLSIMIALFMNRLNAKIALKE 396 MF YL L+I +++ + L ++A KE Sbjct: 192 GMF-YLILTIPLSMLVRYLEKRLA-KE 216 >gi|163858765|ref|YP_001633063.1| amino acids ABC transporter, permease protein [Bordetella petrii DSM 12804] gi|163262493|emb|CAP44796.1| amino acids ABC transporter, permease protein [Bordetella petrii] Length = 234 Score = 103 bits (256), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 62/143 (43%), Positives = 92/143 (64%), Gaps = 5/143 (3%) Query: 255 NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLV 314 N IGG EF IA+ TAA+++E +RS + A+PRGQMEAA +LGL++ +A R V Sbjct: 95 NIIGG-----EFFYATIAIGLVTAAYVSEDLRSAIRAIPRGQMEAARSLGLSYLQAMRKV 149 Query: 315 LLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374 +LPQA + IPPLT+Q L L KN+SLA+A+G +L G TI + T + E L+ +Y Sbjct: 150 ILPQAFKISIPPLTNQTLLLFKNTSLAMAIGLIELTGAGRTIESATFKTFEAYLVVTVLY 209 Query: 375 LSLSIMIALFMNRLNAKIALKEK 397 L++S+++ L L+ ++A K Sbjct: 210 LAISLLLMLAGALLSKRVAYVTK 232 >gi|218895695|ref|YP_002444106.1| amino acid ABC transporter, permease protein [Bacillus cereus G9842] gi|228899326|ref|ZP_04063589.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus thuringiensis IBL 4222] gi|228963738|ref|ZP_04124880.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus thuringiensis serovar sotto str. T04001] gi|218544782|gb|ACK97176.1| amino acid ABC transporter, permease protein [Bacillus cereus G9842] gi|228795974|gb|EEM43440.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus thuringiensis serovar sotto str. T04001] gi|228860357|gb|EEN04754.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus thuringiensis IBL 4222] Length = 218 Score = 103 bits (256), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 69/165 (41%), Positives = 106/165 (64%), Gaps = 17/165 (10%) Query: 235 LVLIALKYQLHFDKPVLG-QFN-FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292 LVLIA + +F PV+G N F+ G+ + L+ YTAAFIAE++R+G+++V Sbjct: 66 LVLIAFIF--YFALPVIGITLNGFVAGT----------VTLTVYTAAFIAEVIRAGILSV 113 Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352 +GQMEAA + GLT+ +A V+LPQAM+ +IPPL +Q+LNL+KNSS+ + ADL+ Sbjct: 114 EKGQMEAARSSGLTYTQAMYHVVLPQAMKIVIPPLGNQFLNLVKNSSILGIIAGADLMYQ 173 Query: 353 GGTIINQTGQAIEI-ILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 G I +T ++ I + MF YL L+I +++ + L ++A KE Sbjct: 174 GDLISTKTFVTFDVYIFVGMF-YLILTIPLSMLVRYLEKRLA-KE 216 >gi|323697541|ref|ZP_08109453.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio sp. ND132] gi|323457473|gb|EGB13338.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio desulfuricans ND132] Length = 246 Score = 103 bits (256), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 52/131 (39%), Positives = 85/131 (64%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 EF+ IAL+ YT+AFIAE +R+G+ ++P+ Q+EA+ A+GL+ + R V+LPQA+R +I Sbjct: 113 EFIMSIIALTVYTSAFIAEEIRAGIFSIPKNQLEASRAVGLSFLQGYRYVILPQALRIVI 172 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 PPL SQ LNL+KNSSL + +G DL+ I + E + + IYL++S++++ Sbjct: 173 PPLISQALNLIKNSSLVMVLGVTDLMYQATQIESYHAMPFEAFTVALLIYLAISLVVSFC 232 Query: 385 MNRLNAKIALK 395 + N ++ Sbjct: 233 ITMYNKHFMIQ 243 Score = 42.0 bits (97), Expect = 0.19, Method: Compositional matrix adjust. Identities = 21/66 (31%), Positives = 33/66 (50%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151 GF T ++ ++ A I+G ++ R++ K W Y E FRN P L+ IFF Y Sbjct: 13 GFCTTMQISTISLVSAMILGIIICILRMTPFKPFQWFSLAYTEFFRNTPLLIQIFFWYNG 72 Query: 152 VLSVLP 157 ++P Sbjct: 73 AHVIIP 78 >gi|30260795|ref|NP_843172.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. Ames] gi|47777838|ref|YP_017269.2| amino acid ABC transporter permease [Bacillus anthracis str. 'Ames Ancestor'] gi|49183633|ref|YP_026885.1| amino acid ABC transporter permease [Bacillus anthracis str. Sterne] gi|52144670|ref|YP_082158.1| glutamine ABC transporter permease [Bacillus cereus E33L] gi|165872951|ref|ZP_02217574.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. A0488] gi|167635148|ref|ZP_02393464.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. A0442] gi|167640890|ref|ZP_02399148.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. A0193] gi|170689011|ref|ZP_02880211.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. A0465] gi|170708477|ref|ZP_02898919.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. A0389] gi|177652812|ref|ZP_02935185.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. A0174] gi|190568537|ref|ZP_03021443.1| amino acid ABC transporter, permease protein [Bacillus anthracis Tsiankovskii-I] gi|196041831|ref|ZP_03109120.1| amino acid ABC transporter, permease protein [Bacillus cereus NVH0597-99] gi|227816489|ref|YP_002816498.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. CDC 684] gi|228913330|ref|ZP_04076963.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228925829|ref|ZP_04088913.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|229120291|ref|ZP_04249541.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus 95/8201] gi|229601249|ref|YP_002865239.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. A0248] gi|254684282|ref|ZP_05148142.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. CNEVA-9066] gi|254722086|ref|ZP_05183875.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. A1055] gi|254738746|ref|ZP_05196449.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. Western North America USA6153] gi|254742042|ref|ZP_05199729.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. Kruger B] gi|254754972|ref|ZP_05207006.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. Vollum] gi|254762297|ref|ZP_05214141.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. Australia 94] gi|30254244|gb|AAP24658.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. Ames] gi|47551543|gb|AAT29744.2| amino acid ABC transporter, permease protein [Bacillus anthracis str. 'Ames Ancestor'] gi|49177560|gb|AAT52936.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. Sterne] gi|51978139|gb|AAU19689.1| ABC transporter, permease; probable glutamine ABC transporter, permease [Bacillus cereus E33L] gi|164711305|gb|EDR16859.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. A0488] gi|167511110|gb|EDR86498.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. A0193] gi|167529407|gb|EDR92158.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. A0442] gi|170126598|gb|EDS95483.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. A0389] gi|170666996|gb|EDT17759.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. A0465] gi|172081846|gb|EDT66915.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. A0174] gi|190560331|gb|EDV14310.1| amino acid ABC transporter, permease protein [Bacillus anthracis Tsiankovskii-I] gi|196027325|gb|EDX65943.1| amino acid ABC transporter, permease protein [Bacillus cereus NVH0597-99] gi|227003240|gb|ACP12983.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. CDC 684] gi|228663101|gb|EEL18691.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus 95/8201] gi|228833844|gb|EEM79397.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228846239|gb|EEM91258.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|229265657|gb|ACQ47294.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. A0248] Length = 218 Score = 103 bits (256), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 73/207 (35%), Positives = 122/207 (58%), Gaps = 25/207 (12%) Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252 SF+LG+VL++ R + ++ T + + + L+ + + +F PV+G Sbjct: 32 SFILGVVLAIMRIAPIRILN----------WLGTAFVEFVRNIPLVLIAFIFYFALPVVG 81 Query: 253 -QFN-FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 N F+ G+ + L+ YTAAFIAE++R+G+++V +GQMEAA + GLT+ +A Sbjct: 82 ITLNGFVAGT----------VTLTVYTAAFIAEVIRAGILSVAKGQMEAARSSGLTYTQA 131 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI-ILI 369 V+LPQAM+ +IPPL +Q+LNL+KNSS+ + ADL+ G I +T ++ I + Sbjct: 132 MYHVVLPQAMKIVIPPLGNQFLNLVKNSSILGIIAGADLMYQGDLISTKTFVTFDVYIFV 191 Query: 370 WMFIYLSLSIMIALFMNRLNAKIALKE 396 MF YL L+I +++ + L ++A KE Sbjct: 192 GMF-YLILTIPLSMLVRYLEKRLA-KE 216 >gi|281492351|ref|YP_003354331.1| glutamine ABC transporter permease/substrate-binding protein [Lactococcus lactis subsp. lactis KF147] gi|281376015|gb|ADA65506.1| Glutamine ABC transporter, permease and substrate-binding protein [Lactococcus lactis subsp. lactis KF147] Length = 714 Score = 103 bits (256), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 70/222 (31%), Positives = 121/222 (54%), Gaps = 35/222 (15%) Query: 167 FGMFLNN-----RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR------HFHEKT 215 FG+ NN RGL +T++ F+ + ++GI+ LF+ S+ + Sbjct: 497 FGILQNNWEQIGRGL---LVTLELAILSFILAMIVGIIFGLFSVAPSKILRTIARIYVDL 553 Query: 216 GKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP--EFMSLYIAL 273 +++PLL ++ F+ +G+P L+ I +Q SP EF + IAL Sbjct: 554 NRSIPLLVLTIFIFYGIPNLLQIITGHQ-------------------SPLNEFTAGVIAL 594 Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333 + ++A+IAEIVRSG+ AVP GQMEA+ +LG+T+ + R V+LPQA++ IP L +Q++ Sbjct: 595 TLNSSAYIAEIVRSGVQAVPSGQMEASRSLGVTYLTSMRKVILPQAIKITIPSLINQFII 654 Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375 LK+++L +G +L+ G I+ + QA + + +Y+ Sbjct: 655 TLKDTTLVSVIGLVELLQTGQIIVARNFQAFRVYGLIGLVYM 696 >gi|196047168|ref|ZP_03114385.1| amino acid ABC transporter, permease protein [Bacillus cereus 03BB108] gi|218901837|ref|YP_002449671.1| amino acid ABC transporter, permease protein [Bacillus cereus AH820] gi|229182975|ref|ZP_04310207.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus BGSC 6E1] gi|196022038|gb|EDX60728.1| amino acid ABC transporter, permease protein [Bacillus cereus 03BB108] gi|218535045|gb|ACK87443.1| amino acid ABC transporter, permease protein [Bacillus cereus AH820] gi|228600432|gb|EEK58020.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus BGSC 6E1] Length = 218 Score = 103 bits (256), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 73/207 (35%), Positives = 122/207 (58%), Gaps = 25/207 (12%) Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252 SF+LG+VL++ R + ++ T + + + L+ + + +F PV+G Sbjct: 32 SFILGVVLAIMRIAPIRILN----------WLGTAFVEFVRNIPLVLIAFIFYFALPVVG 81 Query: 253 -QFN-FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 N F+ G+ + L+ YTAAFIAE++R+G+++V +GQMEAA + GLT+ +A Sbjct: 82 ITLNGFVAGT----------VTLTVYTAAFIAEVIRAGILSVAKGQMEAARSSGLTYTQA 131 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI-ILI 369 V+LPQAM+ +IPPL +Q+LNL+KNSS+ + ADL+ G I +T ++ I + Sbjct: 132 MYHVVLPQAMKIVIPPLGNQFLNLVKNSSILGIIAGADLMYQGDLISTKTFVTFDVYIFV 191 Query: 370 WMFIYLSLSIMIALFMNRLNAKIALKE 396 MF YL L+I +++ + L ++A KE Sbjct: 192 GMF-YLILTIPLSMLVRYLEKRLA-KE 216 >gi|229095293|ref|ZP_04226285.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus Rock3-29] gi|229114242|ref|ZP_04243663.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus Rock1-3] gi|228669262|gb|EEL24683.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus Rock1-3] gi|228688152|gb|EEL42038.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus Rock3-29] Length = 218 Score = 103 bits (256), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 68/165 (41%), Positives = 105/165 (63%), Gaps = 17/165 (10%) Query: 235 LVLIALKYQLHFDKPVLGQF--NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292 LVLIA + +F PV+G F+ G+ + L+ YTAAFIAE++R+G+++V Sbjct: 66 LVLIAFIF--YFALPVIGVTLNGFVAGT----------LTLTVYTAAFIAEVIRAGILSV 113 Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352 +GQMEAA + GLT+ +A V+LPQAM+ +IPPL +Q+LNL+KNSS+ + ADL+ Sbjct: 114 AKGQMEAARSSGLTYTRAMYHVVLPQAMKIVIPPLGNQFLNLVKNSSILGIIAGADLMYQ 173 Query: 353 GGTIINQTGQAIEI-ILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 G I +T ++ I + MF YL L+I +++ + L ++A KE Sbjct: 174 GDLISTKTFVTFDVYIFVGMF-YLILTIPLSMLVRYLEKRLA-KE 216 >gi|118476327|ref|YP_893478.1| glutamine ABC transporter permease [Bacillus thuringiensis str. Al Hakam] gi|118415552|gb|ABK83971.1| amino acid ABC transporter membrane protein 1, PAAT family [Bacillus thuringiensis str. Al Hakam] Length = 218 Score = 103 bits (256), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 73/207 (35%), Positives = 122/207 (58%), Gaps = 25/207 (12%) Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252 SF+LG+VL++ R + ++ T + + + L+ + + +F PV+G Sbjct: 32 SFILGVVLAIMRIAPIRILN----------WLGTAFVEFVRNIPLVLIAFIFYFALPVVG 81 Query: 253 -QFN-FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 N F+ G+ + L+ YTAAFIAE++R+G+++V +GQMEAA + GLT+ +A Sbjct: 82 ITLNGFVAGT----------VTLTVYTAAFIAEVIRAGILSVAKGQMEAARSSGLTYTQA 131 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI-ILI 369 V+LPQAM+ +IPPL +Q+LNL+KNSS+ + ADL+ G I +T ++ I + Sbjct: 132 MYHVVLPQAMKIVIPPLGNQFLNLVKNSSILGIIAGADLMYQGDLISTKTFVTFDVYIFV 191 Query: 370 WMFIYLSLSIMIALFMNRLNAKIALKE 396 MF YL L+I +++ + L ++A KE Sbjct: 192 GMF-YLILTIPLSMLVRYLEKRLA-KE 216 >gi|225862619|ref|YP_002747997.1| amino acid ABC transporter, permease protein [Bacillus cereus 03BB102] gi|225789271|gb|ACO29488.1| amino acid ABC transporter, permease protein [Bacillus cereus 03BB102] Length = 218 Score = 103 bits (256), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 69/165 (41%), Positives = 106/165 (64%), Gaps = 17/165 (10%) Query: 235 LVLIALKYQLHFDKPVLG-QFN-FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292 LVLIA + +F PV+G N F+ G+ + L+ YTAAFIAE++R+G+++V Sbjct: 66 LVLIAFIF--YFALPVIGITLNGFVAGT----------VTLTVYTAAFIAEVIRAGILSV 113 Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352 +GQMEAA + GLT+ +A V+LPQAM+ +IPPL +Q+LNL+KNSS+ + ADL+ Sbjct: 114 AKGQMEAARSSGLTYTQAMYHVVLPQAMKIVIPPLGNQFLNLVKNSSILGIIAGADLMYQ 173 Query: 353 GGTIINQTGQAIEI-ILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 G I +T ++ I + MF YL L+I +++ + L ++A KE Sbjct: 174 GDLISTKTFVTFDVYIFVGMF-YLILTIPLSMLVRYLEKRLA-KE 216 >gi|15673741|ref|NP_267915.1| glutamine ABC transporter permease and substrate binding protein [Lactococcus lactis subsp. lactis Il1403] gi|12724781|gb|AAK05857.1|AE006406_1 glutamine ABC transporter permease and substrate binding protein protein [Lactococcus lactis subsp. lactis Il1403] gi|326407245|gb|ADZ64316.1| glutamine ABC transporter permease/substrate-binding protein [Lactococcus lactis subsp. lactis CV56] Length = 714 Score = 103 bits (256), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 70/222 (31%), Positives = 121/222 (54%), Gaps = 35/222 (15%) Query: 167 FGMFLNN-----RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR------HFHEKT 215 FG+ NN RGL +T++ F+ + ++GI+ LF+ S+ + Sbjct: 497 FGILQNNWEQIGRGL---LVTLELAILSFILAMIVGIIFGLFSVAPSKILRTIARIYVDL 553 Query: 216 GKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP--EFMSLYIAL 273 +++PLL ++ F+ +G+P L+ I +Q SP EF + IAL Sbjct: 554 NRSIPLLVLTIFIFYGIPNLLQIITGHQ-------------------SPLNEFTAGVIAL 594 Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333 + ++A+IAEIVRSG+ AVP GQMEA+ +LG+T+ + R V+LPQA++ IP L +Q++ Sbjct: 595 TLNSSAYIAEIVRSGVQAVPSGQMEASRSLGVTYLTSMRKVILPQAIKITIPSLINQFII 654 Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375 LK+++L +G +L+ G I+ + QA + + +Y+ Sbjct: 655 TLKDTTLVSVIGLVELLQTGQIIVARNFQAFRVYGLIGLVYM 696 >gi|239826928|ref|YP_002949552.1| polar amino acid ABC transporter inner membrane subunit [Geobacillus sp. WCH70] gi|239807221|gb|ACS24286.1| polar amino acid ABC transporter, inner membrane subunit [Geobacillus sp. WCH70] Length = 217 Score = 102 bits (255), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 52/123 (42%), Positives = 84/123 (68%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + L YTAAFIAE++RSG++AVP+GQMEAA + GLT+ + R ++LPQA++ +IPPL +Q Sbjct: 92 LGLMVYTAAFIAEVIRSGILAVPKGQMEAARSSGLTYLQTMRYIILPQAIKIVIPPLGNQ 151 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++NL+KNSS+ + DL+ G I ++T ++ + YL L+I ++L + L Sbjct: 152 FINLVKNSSVLGVIAGLDLMYFGDLISSETFVTFDVYIFVALFYLVLTIPLSLGVGYLEQ 211 Query: 391 KIA 393 ++A Sbjct: 212 RLA 214 >gi|193083903|gb|ACF09582.1| glutamine transport system permease protein glnP [uncultured marine group II euryarchaeote KM3-72-G3] Length = 714 Score = 102 bits (255), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 57/148 (38%), Positives = 97/148 (65%), Gaps = 4/148 (2%) Query: 247 DKPVLGQFNFIGGS--TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304 D P G + GS ++P F+++ + L+ +TA+ IAEIVR + ++PRGQ+EAAI+L Sbjct: 564 DSP--GSWTIAEGSGFEITPFFLAMMLGLTLFTASTIAEIVRGSIQSLPRGQVEAAISLS 621 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364 L + RLV+LPQA+RS++P +Q++N+ KNSSLAV V ++D+ V ++N G+ I Sbjct: 622 LNPYQRLRLVILPQALRSMVPLFNNQFMNVWKNSSLAVIVAYSDIFYVILVMMNNVGKLI 681 Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKI 392 + ++ + Y + S+ I++ MN N ++ Sbjct: 682 PLFILLLITYQAGSLAISIVMNWYNTRV 709 Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust. Identities = 27/74 (36%), Positives = 45/74 (60%), Gaps = 1/74 (1%) Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPI-PDHSIVLPF 167 I+GT+VG RLS+N L + + VYVE+FRN+P V++F + P+ + + L Sbjct: 333 ILGTIVGVTRLSSNWLASSMATVYVEIFRNLPLAVLLFLIATQFGQSAPLFKEETFFLGD 392 Query: 168 GMFLNNRGLSFPTL 181 +F +N+G+ F T+ Sbjct: 393 AVFYSNQGIWFVTV 406 >gi|229089703|ref|ZP_04220964.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus Rock3-42] gi|228693602|gb|EEL47304.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus Rock3-42] Length = 218 Score = 102 bits (255), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 72/207 (34%), Positives = 122/207 (58%), Gaps = 25/207 (12%) Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252 SF+LG+VL++ R + ++ T + + + L+ + + +F PV+G Sbjct: 32 SFILGVVLAIMRIAPIRILN----------WLGTAFVEFVRNIPLVLIAFIFYFALPVVG 81 Query: 253 -QFN-FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 N F+ G+ + L+ YTAAFIAE++R+G+++V +GQMEAA + GLT+++A Sbjct: 82 ITLNGFVAGT----------VTLTVYTAAFIAEVIRAGILSVAKGQMEAARSSGLTYKQA 131 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI-ILI 369 V+LPQAM+ +IPPL +Q+LNL+KNSS+ + DL+ G I +T ++ I + Sbjct: 132 MYHVVLPQAMKIVIPPLGNQFLNLVKNSSILGIIAGVDLMYQGDLISTKTFVTFDVYIFV 191 Query: 370 WMFIYLSLSIMIALFMNRLNAKIALKE 396 MF YL L+I +++ + L ++A KE Sbjct: 192 GMF-YLILTIPLSMLVRYLEKRLA-KE 216 >gi|324324680|gb|ADY19940.1| amino acid ABC transporter, permease protein [Bacillus thuringiensis serovar finitimus YBT-020] Length = 218 Score = 102 bits (255), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 69/165 (41%), Positives = 106/165 (64%), Gaps = 17/165 (10%) Query: 235 LVLIALKYQLHFDKPVLG-QFN-FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292 LVLIA + +F PV+G N F+ G+ + L+ YTAAFIAE++R+G+++V Sbjct: 66 LVLIAFIF--YFALPVVGITLNGFVAGT----------VTLTVYTAAFIAEVIRAGILSV 113 Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352 +GQMEAA + GLT+ +A V+LPQAM+ +IPPL +Q+LNL+KNSS+ + ADL+ Sbjct: 114 AKGQMEAARSSGLTYTQAMYHVVLPQAMKIVIPPLGNQFLNLVKNSSILGIIAGADLMYQ 173 Query: 353 GGTIINQTGQAIEI-ILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 G I +T ++ I + MF YL L+I +++ + L ++A KE Sbjct: 174 GDLISTKTFVTFDVYIFVGMF-YLILTIPLSMLVRYLEKRLA-KE 216 >gi|75765095|ref|ZP_00744384.1| Glutamine transport system permease protein glnM [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|74487419|gb|EAO51346.1| Glutamine transport system permease protein glnM [Bacillus thuringiensis serovar israelensis ATCC 35646] Length = 190 Score = 102 bits (255), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 69/165 (41%), Positives = 106/165 (64%), Gaps = 17/165 (10%) Query: 235 LVLIALKYQLHFDKPVLG-QFN-FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292 LVLIA + +F PV+G N F+ G+ + L+ YTAAFIAE++R+G+++V Sbjct: 38 LVLIAFIF--YFALPVIGITLNGFVAGT----------VTLTVYTAAFIAEVIRAGILSV 85 Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352 +GQMEAA + GLT+ +A V+LPQAM+ +IPPL +Q+LNL+KNSS+ + ADL+ Sbjct: 86 EKGQMEAARSSGLTYTQAMYHVVLPQAMKIVIPPLGNQFLNLVKNSSILGIIAGADLMYQ 145 Query: 353 GGTIINQTGQAIEI-ILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 G I +T ++ I + MF YL L+I +++ + L ++A KE Sbjct: 146 GDLISTKTFVTFDVYIFVGMF-YLILTIPLSMLVRYLEKRLA-KE 188 >gi|330429006|gb|AEC20340.1| glutamate/aspartate transport system permease protein [Pusillimonas sp. T7-7] Length = 142 Score = 102 bits (255), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 56/125 (44%), Positives = 81/125 (64%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 +F+++ IALS YTAA AE++RSG+ AV GQ +AA ALGLT + R V+LPQA R I+ Sbjct: 7 QFLTVLIALSLYTAAKAAEVIRSGIQAVSIGQKQAASALGLTEPGSYRHVILPQAFRIIM 66 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 PPLTS +LN+ KNSS+A+ +GF +L I + + Q E + IY +++ + F Sbjct: 67 PPLTSDFLNVFKNSSVALTIGFMELTGQTRQIGDFSSQPFEAYIAATVIYTLVTLSVIWF 126 Query: 385 MNRLN 389 M R+ Sbjct: 127 MRRIE 131 >gi|90577484|ref|ZP_01233295.1| putative amino acid ABC transporter, permease protein [Vibrio angustum S14] gi|90440570|gb|EAS65750.1| putative amino acid ABC transporter, permease protein [Vibrio angustum S14] Length = 272 Score = 102 bits (255), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 74/213 (34%), Positives = 116/213 (54%), Gaps = 19/213 (8%) Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240 +T+ +A +F+ + G+V +L RLS H G+AL YI +I P LV I L Sbjct: 75 ITIKISAISLIFTIIFGLVTALL--RLS---HSIVGRALARGYIE--VIRNTPLLVQIYL 127 Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300 Y + PVLG F + +ALS + A+ AEI RSGL+ +P+GQ EAA Sbjct: 128 LYFVF--GPVLGL----------ERFTTAVLALSLFQGAYTAEIFRSGLMNIPKGQFEAA 175 Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 +LGL+ + R ++LPQ +R I+P LT++ ++L+KNSS+ + DL + G I+ T Sbjct: 176 ESLGLSKVDSYRYIILPQMLRRILPALTNEAVSLVKNSSIVSIMAIFDLTTQGRDIVADT 235 Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393 EI +YL ++++++ F L K+A Sbjct: 236 AMPFEIWFTIAAMYLCITLLLSAFATLLEHKLA 268 >gi|229194959|ref|ZP_04321740.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus m1293] gi|228588527|gb|EEK46564.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus m1293] Length = 218 Score = 102 bits (255), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 69/165 (41%), Positives = 106/165 (64%), Gaps = 17/165 (10%) Query: 235 LVLIALKYQLHFDKPVLG-QFN-FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292 LVLIA + +F PV+G N F+ G+ + L+ YTAAFIAE++R+G+++V Sbjct: 66 LVLIAFIF--YFALPVVGITLNGFVAGT----------VTLTVYTAAFIAEVIRAGILSV 113 Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352 +GQMEAA + GLT+ +A V+LPQAM+ +IPPL +Q+LNL+KNSS+ + ADL+ Sbjct: 114 AKGQMEAARSSGLTYTQAMYHVVLPQAMKIVIPPLGNQFLNLVKNSSILGIIAGADLMYQ 173 Query: 353 GGTIINQTGQAIEI-ILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 G I +T ++ I + MF YL L+I +++ + L ++A KE Sbjct: 174 GDLISTKTFVTFDVYIFVGMF-YLILTIPLSMLVRYLEKRLA-KE 216 >gi|34495574|ref|NP_899789.1| glutamate/aspartate transport system permease [Chromobacterium violaceum ATCC 12472] gi|34101429|gb|AAQ57798.1| glutamate/aspartate transport system permease [Chromobacterium violaceum ATCC 12472] Length = 246 Score = 102 bits (254), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 55/133 (41%), Positives = 86/133 (64%) Query: 260 STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319 S + +F+S+ + L +TAA +AE VR+G+ A+PRGQ AA+A+G + + R VLLPQA Sbjct: 105 SPTTSQFLSVVVCLGLFTAARVAEQVRTGIEALPRGQRNAAMAVGFSLGQTYRHVLLPQA 164 Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379 MR IIPPLTS++LN++KNSS+A +G A+L++ + E + IY +L++ Sbjct: 165 MRIIIPPLTSEFLNIIKNSSVASLIGLAELLAQTKQTAEFSANLFEAFTLATVIYFTLNM 224 Query: 380 MIALFMNRLNAKI 392 + L M+ L K+ Sbjct: 225 SLMLGMSALEKKL 237 Score = 49.7 bits (117), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 29/66 (43%), Positives = 40/66 (60%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151 G T +A SG I A ++GT+VG R N+ +A + VYVE+FRN+P LV +F Y Sbjct: 28 GLGWTLAVALSGWIIALLLGTVVGVARTLPNRGIAGLATVYVELFRNVPLLVQLFVWYFL 87 Query: 152 VLSVLP 157 V +LP Sbjct: 88 VPDLLP 93 >gi|154505132|ref|ZP_02041870.1| hypothetical protein RUMGNA_02645 [Ruminococcus gnavus ATCC 29149] gi|153794611|gb|EDN77031.1| hypothetical protein RUMGNA_02645 [Ruminococcus gnavus ATCC 29149] Length = 228 Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 62/212 (29%), Positives = 120/212 (56%), Gaps = 20/212 (9%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGK-----ALPLLYISTFLIFGLPTLVLIALKYQLH 245 +F+ ++G+++ F + R H+KTGK A+ +Y++ +I G P+++ + Y + Sbjct: 32 LFALLVGVIIG-FTVAIIRSLHDKTGKFKILNAICKVYLT--IIRGTPSMIQVLFMYLVV 88 Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305 F L IGG +A + A++AEIVRSG++A+P GQ EA +LGL Sbjct: 89 FGASSLNSI-VIGG-----------LAFGINSGAYVAEIVRSGIMAIPEGQTEAGRSLGL 136 Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365 ++ + RL+++PQA ++++P L ++ + L+K +++ +G DL I ++T +A Sbjct: 137 SYGQTMRLIIMPQAFKNVLPALVNEMIVLIKETAIIGYIGEQDLTKAAMVIQSRTFEAFI 196 Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 ++ IYL+L +++ FMN+L ++ E+ Sbjct: 197 PLITAAVIYLALVMLLTFFMNKLERRLRTNER 228 >gi|269104573|ref|ZP_06157269.1| amino acid ABC transporter permease protein [Photobacterium damselae subsp. damselae CIP 102761] gi|268161213|gb|EEZ39710.1| amino acid ABC transporter permease protein [Photobacterium damselae subsp. damselae CIP 102761] Length = 280 Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 79/241 (32%), Positives = 124/241 (51%), Gaps = 25/241 (10%) Query: 158 IPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGK 217 IP + V G + + +T+ +A +F+ LG++ +L RLS G+ Sbjct: 59 IPQYLFVHEDGEWYRGELIDGLLITLKISAVSLIFTLGLGLITALL--RLSDSI---VGR 113 Query: 218 ALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE-FMSLYIALSCY 276 AL YI LI P LV I + Y F+ G + E F + +ALS + Sbjct: 114 ALARGYIE--LIRNTPLLVQIYILY-------------FVLGPILDLERFTTAVLALSLF 158 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 A+ AEI R+GL A+P+GQ EAA +LGL+ + R V+LPQ ++ I+PPLT++ ++L+K Sbjct: 159 QGAYTAEIFRAGLNAIPKGQFEAAASLGLSQWQMYRFVILPQVIKRILPPLTNETVSLVK 218 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI----ALFMNRLNAKI 392 NSS+ + DL + G I+ T E+ IYL +++++ A +RLN I Sbjct: 219 NSSIVSIMAIFDLTTEGRNIVADTAMPFEVWFTVAAIYLCVTLLLSAVAAWMAHRLNTAI 278 Query: 393 A 393 A Sbjct: 279 A 279 >gi|218296356|ref|ZP_03497099.1| polar amino acid ABC transporter, inner membrane subunit [Thermus aquaticus Y51MC23] gi|218243150|gb|EED09681.1| polar amino acid ABC transporter, inner membrane subunit [Thermus aquaticus Y51MC23] Length = 263 Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 76/210 (36%), Positives = 115/210 (54%), Gaps = 16/210 (7%) Query: 188 KIFVFSFVLGIVLSLFA--TRLSRHFHEKTGKALPLLYISTFLIF---GLPTLVLIALKY 242 K+ + S + G+V+ + A RLS + LP +TF I+ G P LV I Y Sbjct: 60 KLTLISGLAGLVIGVLAGMARLSSRAWVR----LP----ATFYIWVTRGTPLLVQILFAY 111 Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302 P L Q + G + + +IALS A+ AE+VR+G+ A+P+GQ EAA + Sbjct: 112 N---ALPFLLQPLWPGAQQALTPYWAAFIALSFNVGAYNAEVVRAGIQAIPKGQWEAAWS 168 Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362 LGL+ R V+LPQA+R ++PPL + + LLK+SSLA + A+L G II+ T + Sbjct: 169 LGLSPVDTMRFVVLPQALRIVVPPLVNNLVALLKDSSLASVITLAELALSGQRIISATFR 228 Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 +E+ L IYL L+ ++ F NRL ++ Sbjct: 229 PVEVYLAVAAIYLLLTTVLTQFTNRLEERL 258 >gi|157693148|ref|YP_001487610.1| glutamine ABC transporter membrane protein [Bacillus pumilus SAFR-032] gi|157681906|gb|ABV63050.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Bacillus pumilus SAFR-032] Length = 217 Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 68/175 (38%), Positives = 105/175 (60%), Gaps = 10/175 (5%) Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279 PL ++ T + + + L+ + + F PVLG V+ F + IAL+ YT+A Sbjct: 49 PLNWLGTAYVEFIRNIPLLLITFVFFFGLPVLG--------IVADGFTAGTIALAIYTSA 100 Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339 FIAE VR+G+ AVP GQMEAA A GL++ R ++LPQA++ +IPPL +Q++NL+KNSS Sbjct: 101 FIAEAVRAGIQAVPLGQMEAARASGLSYGGTMRYIILPQAIKIVIPPLGNQFINLVKNSS 160 Query: 340 -LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393 L V GF DL+ G I ++T ++ + YL L+I ++L + L ++A Sbjct: 161 ILGVIAGF-DLMYQGDLIASRTFVTFDVYIFVAMFYLILTIPLSLGVGYLEKRLA 214 >gi|54308669|ref|YP_129689.1| amino acid ABC transporter permease [Photobacterium profundum SS9] gi|46913098|emb|CAG19887.1| hypothetical amino acid ABC transporter, permease protein [Photobacterium profundum SS9] Length = 315 Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 67/209 (32%), Positives = 110/209 (52%), Gaps = 15/209 (7%) Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247 KI + S +++ L A L R + K L LY+ +I G P L+ I + Y Sbjct: 122 KISIISLFFAVIIGLVAG-LMRISNNPVTKNLSFLYVE--IIRGTPLLIQIFIVY----- 173 Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307 F+G F + +ALS +T A+IAEI+RSG+ ++P GQMEAA +LG+ + Sbjct: 174 -------FFLGTIFDLERFTAGVVALSVFTGAYIAEIIRSGIQSIPPGQMEAARSLGMNY 226 Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367 KA V+LPQA + +PP+ Q + L+K+SSL + DL G +I+ + E+ Sbjct: 227 PKAMAYVILPQAFKRTLPPMAGQLITLIKDSSLVSVISITDLTKAGREVISGSFATFEVW 286 Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIALKE 396 + +YL L+I ++ + R+ ++A + Sbjct: 287 FVVAGLYLLLTISLSWVVQRIEKRLASSD 315 >gi|227877817|ref|ZP_03995841.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus crispatus JV-V01] gi|256844626|ref|ZP_05550111.1| glutamine ABC transporter permease [Lactobacillus crispatus 125-2-CHN] gi|256850695|ref|ZP_05556119.1| glutamine ABC transporter permease [Lactobacillus crispatus MV-1A-US] gi|293381614|ref|ZP_06627598.1| ABC transporter, permease protein [Lactobacillus crispatus 214-1] gi|295692448|ref|YP_003601058.1| glutamine ABC transporter, permease protein [Lactobacillus crispatus ST1] gi|227862578|gb|EEJ70073.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus crispatus JV-V01] gi|256613167|gb|EEU18371.1| glutamine ABC transporter permease [Lactobacillus crispatus 125-2-CHN] gi|256712466|gb|EEU27463.1| glutamine ABC transporter permease [Lactobacillus crispatus MV-1A-US] gi|290921798|gb|EFD98816.1| ABC transporter, permease protein [Lactobacillus crispatus 214-1] gi|295030554|emb|CBL50033.1| Glutamine ABC transporter, permease protein [Lactobacillus crispatus ST1] Length = 213 Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 74/203 (36%), Positives = 116/203 (57%), Gaps = 20/203 (9%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 VFS +LG++ +L S K G+ + +YI+ F +P LV++ + Y L + + Sbjct: 28 VFSLILGVIFALLEVAPS-----KFGQVIAKIYIAIFR--NIPLLVIVMIFY-LIVPRYI 79 Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 + F G+ I L+ YT+AFIAE VR+G+ ++ GQME A + G+T+ +A Sbjct: 80 VKLSGFQAGT----------IGLTLYTSAFIAETVRAGINSIGTGQMEGARSNGMTYVQA 129 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSS-LAVAVGFADLVSVGGTIINQTGQAIEIILI 369 R V+LPQAM+ +IPPL +Q++NL+KNSS LA GF DL+ I T Q I+ +I Sbjct: 130 MRYVILPQAMKIVIPPLGNQFVNLVKNSSVLAFVAGF-DLMYQAQLIAFSTFQTIDTYII 188 Query: 370 WMFIYLSLSIMIALFMNRLNAKI 392 YL L++ ++ +M L K+ Sbjct: 189 VGLFYLILTLPLSYYMRHLEKKL 211 >gi|224372631|ref|YP_002607003.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Nautilia profundicola AmH] gi|223588694|gb|ACM92430.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Nautilia profundicola AmH] Length = 237 Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 52/128 (40%), Positives = 81/128 (63%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F S +AL YT A+I E+V++G+ ++P+GQ EAA +LG+ + ++ PQA+R IIP Sbjct: 104 FFSALLALILYTGAYIGEVVKAGINSIPKGQFEAAQSLGMNRFQVMWYIIYPQAIRIIIP 163 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PLTSQ+LNL+KNSSLA+ +G A+L I +T + E +Y+ L++ + FM Sbjct: 164 PLTSQFLNLIKNSSLAMTIGVAELTFATQQIDAETFRGFEAATAVTILYIFLTLTTSFFM 223 Query: 386 NRLNAKIA 393 N + K + Sbjct: 224 NLIEIKFS 231 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 29/81 (35%), Positives = 47/81 (58%), Gaps = 5/81 (6%) Query: 69 GFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWI 128 G+E D G++ Y ++ G + T L+ G++ + +IG++VG GR S N ++ Sbjct: 2 GYEFDWGVLI-----EYKGLLIQGLITTVKLSILGILFSFLIGSIVGIGRASKNFWLSLF 56 Query: 129 CRVYVEVFRNIPPLVVIFFLY 149 YVE FRNIP +V +FF+Y Sbjct: 57 ASYYVESFRNIPLIVQMFFIY 77 >gi|262047082|ref|ZP_06020041.1| glutamine ABC transporter permease [Lactobacillus crispatus MV-3A-US] gi|312984302|ref|ZP_07791646.1| amino acid ABC transporter, amino acid-binding/permease protein [Lactobacillus crispatus CTV-05] gi|260572659|gb|EEX29220.1| glutamine ABC transporter permease [Lactobacillus crispatus MV-3A-US] gi|310894320|gb|EFQ43398.1| amino acid ABC transporter, amino acid-binding/permease protein [Lactobacillus crispatus CTV-05] Length = 213 Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 74/203 (36%), Positives = 116/203 (57%), Gaps = 20/203 (9%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 VFS +LG++ +L S K G+ + +YI+ F +P LV++ + Y L + + Sbjct: 28 VFSLILGVIFALLEVAPS-----KFGQVIAKIYIAIFR--NIPLLVIVMIFY-LIVPRYI 79 Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 + F G+ I L+ YT+AFIAE VR+G+ ++ GQME A + G+T+ +A Sbjct: 80 VKLSGFQAGT----------IGLTLYTSAFIAETVRAGINSIGTGQMEGARSNGMTYVQA 129 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSS-LAVAVGFADLVSVGGTIINQTGQAIEIILI 369 R V+LPQAM+ +IPPL +Q++NL+KNSS LA GF DL+ I T Q I+ +I Sbjct: 130 MRYVILPQAMKIVIPPLGNQFVNLVKNSSVLAFVAGF-DLMYQAQLIAFSTFQTIDTYII 188 Query: 370 WMFIYLSLSIMIALFMNRLNAKI 392 YL L++ ++ +M L K+ Sbjct: 189 VGLFYLILTLPLSYYMRHLEKKL 211 >gi|251791765|ref|YP_003006486.1| polar amino acid ABC transporter inner membrane subunit [Dickeya zeae Ech1591] gi|247540386|gb|ACT09007.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya zeae Ech1591] Length = 247 Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 71/188 (37%), Positives = 106/188 (56%), Gaps = 14/188 (7%) Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHF--------HEKTGKALPLLYISTFLIFGL 232 +T+ A V + +LG++L+ A R SR + + + PLL F FG+ Sbjct: 29 VTLGLAAVTVVLATLLGLILA--AGRDSRTWLLRWLVIAYCSLFRNTPLLVQLFFWYFGV 86 Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292 L+ L L + P + +G + S EF++ L+ Y+AAFIAE +R+G+ V Sbjct: 87 AQLLPAGLMQWL--NSPHI--IPLVGLNIPSFEFLAGLFGLTLYSAAFIAEEIRAGIAGV 142 Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352 RGQ AA ALGLTH +A R V+LPQA+R +PPL QY+N++KNSSLA+A+G A+L Sbjct: 143 ARGQQYAACALGLTHWQAMRYVVLPQALRIALPPLLGQYMNIIKNSSLAMAIGVAELSYA 202 Query: 353 GGTIINQT 360 + +T Sbjct: 203 SRQVETET 210 Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 31/89 (34%), Positives = 46/89 (51%), Gaps = 4/89 (4%) Query: 73 DQGIVPYTSD----SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWI 128 D+ I + +D Y + GF T LA ++ AT++G ++ AGR S L+ W+ Sbjct: 3 DESIRHWLTDWLLAPQYLQWLWQGFQVTLGLAAVTVVLATLLGLILAAGRDSRTWLLRWL 62 Query: 129 CRVYVEVFRNIPPLVVIFFLYKSVLSVLP 157 Y +FRN P LV +FF Y V +LP Sbjct: 63 VIAYCSLFRNTPLLVQLFFWYFGVAQLLP 91 >gi|228957062|ref|ZP_04118836.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus thuringiensis serovar pakistani str. T13001] gi|228802622|gb|EEM49465.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus thuringiensis serovar pakistani str. T13001] Length = 218 Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 69/165 (41%), Positives = 106/165 (64%), Gaps = 17/165 (10%) Query: 235 LVLIALKYQLHFDKPVLG-QFN-FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292 LVLIA + +F PV+G N FI G+ + L+ YTAAFIAE++R+G+++V Sbjct: 66 LVLIAFIF--YFALPVIGITLNGFIAGT----------VTLTVYTAAFIAEVIRAGILSV 113 Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352 +GQMEAA + GLT+ +A V+LPQA++ +IPPL +Q+LNL+KNSS+ + ADL+ Sbjct: 114 AKGQMEAARSSGLTYVQAMYYVVLPQAVKIVIPPLGNQFLNLVKNSSILGIIAGADLMYQ 173 Query: 353 GGTIINQTGQAIEI-ILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 G I +T ++ I + MF YL L+I +++ + L ++A KE Sbjct: 174 GDLISTKTFVTFDVYIFVGMF-YLILTIPLSMLVRYLEKRLA-KE 216 >gi|229159721|ref|ZP_04287730.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus R309803] gi|228623746|gb|EEK80563.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus R309803] Length = 218 Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 68/165 (41%), Positives = 105/165 (63%), Gaps = 17/165 (10%) Query: 235 LVLIALKYQLHFDKPVLG-QFN-FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292 LVLIA + +F PV+G N F+ G+ + L+ YTAAFIAE++R+G+++V Sbjct: 66 LVLIAFIF--YFALPVIGITLNGFVAGT----------VTLTVYTAAFIAEVIRAGILSV 113 Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352 +GQMEAA + GLT+ +A V+LPQAM+ +IPPL +Q+LNL+KNSS+ + DL+ Sbjct: 114 AKGQMEAARSSGLTYVQAMYYVVLPQAMKIVIPPLGNQFLNLVKNSSILGIIAGTDLMYQ 173 Query: 353 GGTIINQTGQAIEI-ILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 G I +T ++ I + MF YL L+I +++ + L ++A KE Sbjct: 174 GDLISTKTFVTFDVYIFVGMF-YLILTIPLSMLVRYLEKRLA-KE 216 >gi|94985165|ref|YP_604529.1| amino acid ABC transporter permease [Deinococcus geothermalis DSM 11300] gi|94555446|gb|ABF45360.1| amino acid ABC transporter membrane protein, PAAT family [Deinococcus geothermalis DSM 11300] Length = 263 Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 50/133 (37%), Positives = 87/133 (65%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 EF S IAL+ A+ AE++R+G++AVPRGQ+EAA +LGL+ + R V+LPQA+R ++ Sbjct: 131 EFWSAVIALALNVGAYNAEVIRAGILAVPRGQVEAARSLGLSGVQTMRTVVLPQALRIVV 190 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 PPL + + LLK+SSLA + +L G + ++T Q + ++ +YL+L+ ++ LF Sbjct: 191 PPLVNNLVALLKDSSLASTISLLELTLAGSRVSSETFQPVPVLTTIAAVYLALTTVMTLF 250 Query: 385 MNRLNAKIALKEK 397 ++L ++ + + Sbjct: 251 TDQLEKRVKIATR 263 >gi|69246348|ref|ZP_00603904.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Enterococcus faecium DO] gi|257878164|ref|ZP_05657817.1| amino acid ABC transporter [Enterococcus faecium 1,230,933] gi|257881052|ref|ZP_05660705.1| amino acid ABC transporter [Enterococcus faecium 1,231,502] gi|257884713|ref|ZP_05664366.1| amino acid ABC transporter [Enterococcus faecium 1,231,501] gi|257889637|ref|ZP_05669290.1| amino acid ABC transporter [Enterococcus faecium 1,231,410] gi|257892423|ref|ZP_05672076.1| amino acid ABC transporter [Enterococcus faecium 1,231,408] gi|257898671|ref|ZP_05678324.1| amino acid ABC transporter [Enterococcus faecium Com15] gi|258616330|ref|ZP_05714100.1| glutamine transport system permease protein [Enterococcus faecium DO] gi|260559211|ref|ZP_05831397.1| amino acid ABC transporter [Enterococcus faecium C68] gi|261207744|ref|ZP_05922429.1| amino acid ABC transporter [Enterococcus faecium TC 6] gi|289565819|ref|ZP_06446261.1| glutamine ABC transporter permease glnM [Enterococcus faecium D344SRF] gi|293554037|ref|ZP_06674637.1| general L-amino acid transport system permease protein AapQ [Enterococcus faecium E1039] gi|293563129|ref|ZP_06677594.1| general L-amino acid transport system permease protein AapQ [Enterococcus faecium E1162] gi|293569786|ref|ZP_06680873.1| general L-amino acid transport system permease protein AapQ [Enterococcus faecium E1071] gi|293572582|ref|ZP_06683556.1| general L-amino acid transport system permease protein AapQ [Enterococcus faecium E980] gi|294614007|ref|ZP_06693937.1| general L-amino acid transport system permease protein AapQ [Enterococcus faecium E1636] gi|294623309|ref|ZP_06702171.1| general L-amino acid transport system permease protein AapQ [Enterococcus faecium U0317] gi|314939890|ref|ZP_07847096.1| ABC transporter, permease protein [Enterococcus faecium TX0133a04] gi|314943737|ref|ZP_07850476.1| ABC transporter, permease protein [Enterococcus faecium TX0133C] gi|314949693|ref|ZP_07853011.1| ABC transporter, permease protein [Enterococcus faecium TX0082] gi|314953239|ref|ZP_07856178.1| ABC transporter, permease protein [Enterococcus faecium TX0133A] gi|314993681|ref|ZP_07859029.1| ABC transporter, permease protein [Enterococcus faecium TX0133B] gi|314997402|ref|ZP_07862353.1| ABC transporter, permease protein [Enterococcus faecium TX0133a01] gi|68195301|gb|EAN09752.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Enterococcus faecium DO] gi|257812392|gb|EEV41150.1| amino acid ABC transporter [Enterococcus faecium 1,230,933] gi|257816710|gb|EEV44038.1| amino acid ABC transporter [Enterococcus faecium 1,231,502] gi|257820551|gb|EEV47699.1| amino acid ABC transporter [Enterococcus faecium 1,231,501] gi|257825997|gb|EEV52623.1| amino acid ABC transporter [Enterococcus faecium 1,231,410] gi|257828802|gb|EEV55409.1| amino acid ABC transporter [Enterococcus faecium 1,231,408] gi|257836583|gb|EEV61657.1| amino acid ABC transporter [Enterococcus faecium Com15] gi|260074968|gb|EEW63284.1| amino acid ABC transporter [Enterococcus faecium C68] gi|260078127|gb|EEW65833.1| amino acid ABC transporter [Enterococcus faecium TC 6] gi|289162362|gb|EFD10220.1| glutamine ABC transporter permease glnM [Enterococcus faecium D344SRF] gi|291587534|gb|EFF19411.1| general L-amino acid transport system permease protein AapQ [Enterococcus faecium E1071] gi|291593114|gb|EFF24693.1| general L-amino acid transport system permease protein AapQ [Enterococcus faecium E1636] gi|291597277|gb|EFF28466.1| general L-amino acid transport system permease protein AapQ [Enterococcus faecium U0317] gi|291601819|gb|EFF32071.1| general L-amino acid transport system permease protein AapQ [Enterococcus faecium E1039] gi|291604907|gb|EFF34376.1| general L-amino acid transport system permease protein AapQ [Enterococcus faecium E1162] gi|291607365|gb|EFF36713.1| general L-amino acid transport system permease protein AapQ [Enterococcus faecium E980] gi|313588537|gb|EFR67382.1| ABC transporter, permease protein [Enterococcus faecium TX0133a01] gi|313591855|gb|EFR70700.1| ABC transporter, permease protein [Enterococcus faecium TX0133B] gi|313594705|gb|EFR73550.1| ABC transporter, permease protein [Enterococcus faecium TX0133A] gi|313597600|gb|EFR76445.1| ABC transporter, permease protein [Enterococcus faecium TX0133C] gi|313640853|gb|EFS05433.1| ABC transporter, permease protein [Enterococcus faecium TX0133a04] gi|313643951|gb|EFS08531.1| ABC transporter, permease protein [Enterococcus faecium TX0082] Length = 215 Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 71/216 (32%), Positives = 121/216 (56%), Gaps = 18/216 (8%) Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240 +T+ ++ VFS ++G ++++F +LS++ K AL Y+ F +P L+++ Sbjct: 18 ITLFSSVLALVFSLIIGTLMAIF--QLSKN---KVVSALAKAYVEFFR--NIPLLIIVMF 70 Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300 Y + P+ FN G F + I L+ YT+AFIAE VRSG+ VP+GQ EA Sbjct: 71 FYVV---VPIY-WFNLDG-------FQAGTIGLTIYTSAFIAETVRSGIQTVPKGQTEAG 119 Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 ++ G T+ + R ++LPQA + +IPPL +Q++NL+KNSS+ V DL+ G I ++T Sbjct: 120 LSSGFTYSEIMRYIVLPQAFKIVIPPLGNQFINLVKNSSILAIVAGLDLMYQGDLIASET 179 Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 + +I YL +++ ++ M L K A++ Sbjct: 180 FNTFDTYIIVGLFYLVITLPLSYLMVYLEKKWAVRS 215 Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust. Identities = 25/67 (37%), Positives = 41/67 (61%) Query: 83 SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142 +Y + GF T + + ++ + IIGTL+ +LS NK+V+ + + YVE FRNIP L Sbjct: 6 QTYGPIFVDGFKITLFSSVLALVFSLIIGTLMAIFQLSKNKVVSALAKAYVEFFRNIPLL 65 Query: 143 VVIFFLY 149 +++ F Y Sbjct: 66 IIVMFFY 72 >gi|300690824|ref|YP_003751819.1| amino acid transmembrane abc transporter protein [Ralstonia solanacearum PSI07] gi|299077884|emb|CBJ50523.1| putative amino acid transmembrane abc transporter protein [Ralstonia solanacearum PSI07] Length = 231 Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 64/168 (38%), Positives = 98/168 (58%), Gaps = 15/168 (8%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 + +PLL F FG P L+ +++K L+ N+ S V IAL Y Sbjct: 66 RNVPLLAHMLFWYFGAPQLLPMSVKTWLY-------NLNYEAASAV--------IALVLY 110 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 TAA++AE +RSG+ ++P+ Q+EA+ ALGL +A RLV+LPQ++R +PP+ SQ LNL K Sbjct: 111 TAAYMAEDIRSGIRSIPKEQLEASRALGLGFLQAMRLVVLPQSLRVTVPPMVSQTLNLWK 170 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 NSS+A+ +G A+L+ + + T + E YLS+S+ I +F Sbjct: 171 NSSIAMVIGVAELMYQAQQVESATFRGFEAFAFATAAYLSISMAITVF 218 >gi|228937879|ref|ZP_04100507.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228970760|ref|ZP_04131400.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228788885|gb|EEM36824.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228821785|gb|EEM67785.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus thuringiensis serovar berliner ATCC 10792] gi|326938357|gb|AEA14253.1| glutamine transport system permease protein glnP [Bacillus thuringiensis serovar chinensis CT-43] Length = 218 Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 68/165 (41%), Positives = 105/165 (63%), Gaps = 17/165 (10%) Query: 235 LVLIALKYQLHFDKPVLG-QFN-FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292 LVLIA + +F PV+G N F+ G+ + L+ YTAAFIAE++R+G+++V Sbjct: 66 LVLIAFIF--YFALPVIGITLNGFVAGT----------VTLTVYTAAFIAEVIRAGILSV 113 Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352 +GQMEAA + GLT+ +A V+LPQAM+ +IPPL +Q+LNL+KNSS+ + DL+ Sbjct: 114 AKGQMEAARSSGLTYTQAMYHVVLPQAMKIVIPPLGNQFLNLVKNSSILGIIAGTDLMYQ 173 Query: 353 GGTIINQTGQAIEI-ILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 G I +T ++ I + MF YL L+I +++ + L ++A KE Sbjct: 174 GDLISTKTFVTFDVYIFVGMF-YLILTIPLSMLVRYLEKRLA-KE 216 >gi|229177166|ref|ZP_04304555.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus 172560W] gi|228606347|gb|EEK63779.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus 172560W] Length = 218 Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 68/165 (41%), Positives = 106/165 (64%), Gaps = 17/165 (10%) Query: 235 LVLIALKYQLHFDKPVLG-QFN-FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292 LVLIA + +F PV+G N F+ G+ + L+ YTAAFIAE++R+G+++V Sbjct: 66 LVLIAFIF--YFALPVIGITLNGFVAGT----------VTLTVYTAAFIAEVIRAGILSV 113 Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352 +GQMEAA + GLT+ +A V+LPQA++ +IPPL +Q+LNL+KNSS+ + ADL+ Sbjct: 114 AKGQMEAARSSGLTYVQAMYYVVLPQAVKIVIPPLGNQFLNLVKNSSILGIIAGADLMYQ 173 Query: 353 GGTIINQTGQAIEI-ILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 G I +T ++ I + MF YL L+I +++ + L ++A KE Sbjct: 174 GDLISTKTFVTFDVYIFVGMF-YLILTIPLSMLVRYLEKRLA-KE 216 >gi|301052295|ref|YP_003790506.1| ABC transporter permease [Bacillus anthracis CI] gi|300374464|gb|ADK03368.1| ABC transporter, permease; probable glutamine ABC transporter, permease [Bacillus cereus biovar anthracis str. CI] Length = 218 Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 72/207 (34%), Positives = 121/207 (58%), Gaps = 25/207 (12%) Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252 SF+LG+VL++ R + ++ T + + + L+ + + +F PV+G Sbjct: 32 SFILGVVLAIMRIAPIRILN----------WLGTAFVEFVRNIPLVLIAFIFYFALPVVG 81 Query: 253 -QFN-FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 N F+ G+ + L+ YTAAFIAE++R+G+++V +GQMEAA + GLT+ +A Sbjct: 82 ITLNGFVAGT----------VTLTVYTAAFIAEVIRAGILSVAKGQMEAARSSGLTYTQA 131 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI-ILI 369 V+LPQAM+ +IPPL +Q+LNL+KNSS+ + DL+ G I +T ++ I + Sbjct: 132 MYHVVLPQAMKIVIPPLGNQFLNLVKNSSILGIIAGTDLMYQGDLISTKTFVTFDVYIFV 191 Query: 370 WMFIYLSLSIMIALFMNRLNAKIALKE 396 MF YL L+I +++ + L ++A KE Sbjct: 192 GMF-YLILTIPLSMLVRYLEKRLA-KE 216 >gi|228995973|ref|ZP_04155629.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus mycoides Rock3-17] gi|229003590|ref|ZP_04161406.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus mycoides Rock1-4] gi|228757632|gb|EEM06861.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus mycoides Rock1-4] gi|228763746|gb|EEM12637.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus mycoides Rock3-17] Length = 233 Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 62/161 (38%), Positives = 99/161 (61%), Gaps = 14/161 (8%) Query: 235 LVLIALKYQLHFDKPVLGQF--NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292 LVLIA + +F PV+G FI G+ AL+ YTAAFIAE +R+G+++V Sbjct: 81 LVLIA--FVFYFAFPVMGVTLNGFIAGTA----------ALTIYTAAFIAEAIRAGILSV 128 Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352 P+GQMEAA + GLT+ +A ++LPQA++ +IPPL +Q+LNL+KNSS+ + ADL+ Sbjct: 129 PKGQMEAARSSGLTYVQAMYYIVLPQAIKIVIPPLGNQFLNLVKNSSILGIIAGADLMYQ 188 Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393 G I +T ++ + YL L++ +++ + ++A Sbjct: 189 GDLISTRTFVTFDVYIFVGMFYLLLTVPLSMLVRYFEKRLA 229 Score = 36.2 bits (82), Expect = 9.9, Method: Compositional matrix adjust. Identities = 19/60 (31%), Positives = 33/60 (55%) Query: 90 LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 L GF T + +I + I+GT++ R++ +++ W YVE RNIP +++ F Y Sbjct: 30 LEGFKYTVMSSIVALIGSFILGTIMAVMRIAPIRVLNWFGAAYVEFIRNIPLVLIAFVFY 89 >gi|206968581|ref|ZP_03229537.1| amino acid ABC transporter, permease protein [Bacillus cereus AH1134] gi|228919495|ref|ZP_04082859.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228951132|ref|ZP_04113248.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|229068326|ref|ZP_04201629.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus F65185] gi|229077954|ref|ZP_04210563.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus Rock4-2] gi|229108250|ref|ZP_04237872.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus Rock1-15] gi|229143368|ref|ZP_04271799.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus BDRD-ST24] gi|206737501|gb|EDZ54648.1| amino acid ABC transporter, permease protein [Bacillus cereus AH1134] gi|228640175|gb|EEK96574.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus BDRD-ST24] gi|228675266|gb|EEL30488.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus Rock1-15] gi|228705292|gb|EEL57669.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus Rock4-2] gi|228714787|gb|EEL66659.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus F65185] gi|228808542|gb|EEM55045.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228840138|gb|EEM85415.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 218 Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 68/165 (41%), Positives = 106/165 (64%), Gaps = 17/165 (10%) Query: 235 LVLIALKYQLHFDKPVLG-QFN-FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292 LVLIA + +F PV+G N F+ G+ + L+ YTAAFIAE++R+G+++V Sbjct: 66 LVLIAFIF--YFALPVIGITLNGFVAGT----------VTLTVYTAAFIAEVIRAGILSV 113 Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352 +GQMEAA + GLT+ +A V+LPQA++ +IPPL +Q+LNL+KNSS+ + ADL+ Sbjct: 114 AKGQMEAARSSGLTYVQAMYYVVLPQAVKIVIPPLGNQFLNLVKNSSILGIIAGADLMYQ 173 Query: 353 GGTIINQTGQAIEI-ILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 G I +T ++ I + MF YL L+I +++ + L ++A KE Sbjct: 174 GDLISTKTFVTFDVYIFVGMF-YLILTIPLSMLVRYLEKRLA-KE 216 >gi|228989783|ref|ZP_04149763.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus pseudomycoides DSM 12442] gi|228769930|gb|EEM18513.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus pseudomycoides DSM 12442] Length = 233 Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 65/162 (40%), Positives = 102/162 (62%), Gaps = 16/162 (9%) Query: 235 LVLIALKYQLHFDKPVLGQF--NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292 LVLIA + +F PV+G FI G+ AL+ YTAAFIAE +R+G+++V Sbjct: 81 LVLIA--FVFYFAFPVMGVTLNGFIAGTA----------ALTIYTAAFIAEAIRAGILSV 128 Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352 P+GQMEAA + GLT+ +A ++LPQA++ +IPPL +Q+LNL+KNSS+ + ADL+ Sbjct: 129 PKGQMEAARSSGLTYVQAMYYIVLPQAIKIVIPPLGNQFLNLVKNSSILGIIAGADLMYQ 188 Query: 353 GGTIINQTGQAIEI-ILIWMFIYLSLSIMIALFMNRLNAKIA 393 G I +T ++ I + MF YL L++ +++ + ++A Sbjct: 189 GDLISTRTFVTFDVYIFVGMF-YLLLTVPLSMLVRYFEKRLA 229 >gi|228977335|ref|ZP_04137730.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus thuringiensis Bt407] gi|228782312|gb|EEM30495.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus thuringiensis Bt407] Length = 206 Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 68/165 (41%), Positives = 105/165 (63%), Gaps = 17/165 (10%) Query: 235 LVLIALKYQLHFDKPVLG-QFN-FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292 LVLIA + +F PV+G N F+ G+ + L+ YTAAFIAE++R+G+++V Sbjct: 54 LVLIAFIF--YFALPVIGITLNGFVAGT----------VTLTVYTAAFIAEVIRAGILSV 101 Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352 +GQMEAA + GLT+ +A V+LPQAM+ +IPPL +Q+LNL+KNSS+ + DL+ Sbjct: 102 AKGQMEAARSSGLTYTQAMYHVVLPQAMKIVIPPLGNQFLNLVKNSSILGIIAGTDLMYQ 161 Query: 353 GGTIINQTGQAIEI-ILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 G I +T ++ I + MF YL L+I +++ + L ++A KE Sbjct: 162 GDLISTKTFVTFDVYIFVGMF-YLILTIPLSMLVRYLEKRLA-KE 204 >gi|326797190|ref|YP_004315010.1| polar amino acid ABC transporter inner membrane subunit [Marinomonas mediterranea MMB-1] gi|326547954|gb|ADZ93174.1| polar amino acid ABC transporter, inner membrane subunit [Marinomonas mediterranea MMB-1] Length = 314 Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 71/205 (34%), Positives = 110/205 (53%), Gaps = 23/205 (11%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 VFS +LG++ L R+S H + + L + Y+ +I G P LV I + Y Sbjct: 128 VFSIILGLIFGLM--RIS---HRQVLRNLAVTYVE--VIRGTPLLVQIFIVY-------- 172 Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 FIG F + ALS +T A++AEIVR+G+ AVP GQMEAA +LG+ + +A Sbjct: 173 ----FFIGTVFDLDRFTAGVAALSIFTGAYVAEIVRAGIQAVPTGQMEAARSLGMNYVQA 228 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370 V++PQA++ +PPL Q++NL+K+SSL + DL G +++ + E+ Sbjct: 229 MCYVIMPQAIKRTLPPLAGQFINLIKDSSLVSVISITDLTKAGREVVSGSFAPFEVWFTV 288 Query: 371 MFIYL----SLSIMIALFMNRLNAK 391 +YL +LS I + RL+A Sbjct: 289 AALYLIVTGALSWAIQILEKRLSAS 313 >gi|295400876|ref|ZP_06810852.1| polar amino acid ABC transporter, inner membrane subunit [Geobacillus thermoglucosidasius C56-YS93] gi|312111274|ref|YP_003989590.1| polar amino acid ABC transporter inner membrane subunit [Geobacillus sp. Y4.1MC1] gi|294977139|gb|EFG52741.1| polar amino acid ABC transporter, inner membrane subunit [Geobacillus thermoglucosidasius C56-YS93] gi|311216375|gb|ADP74979.1| polar amino acid ABC transporter, inner membrane subunit [Geobacillus sp. Y4.1MC1] Length = 217 Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 51/123 (41%), Positives = 84/123 (68%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + L+ YTAAFIAE++RSG++AVP+GQ EAA + GLT+ + R ++LPQA++ +IPPL +Q Sbjct: 92 LGLTVYTAAFIAEVIRSGILAVPKGQTEAARSSGLTYLQTMRYIILPQAIKIVIPPLGNQ 151 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++NL+KNSS+ + DL+ G I ++T ++ + YL L+I ++L + L Sbjct: 152 FINLVKNSSVLGVIAGLDLMYFGDLISSETFVTFDVYIFVALFYLVLTIPLSLGVGYLER 211 Query: 391 KIA 393 ++A Sbjct: 212 RLA 214 >gi|228906388|ref|ZP_04070272.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus thuringiensis IBL 200] gi|228853300|gb|EEM98073.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus thuringiensis IBL 200] Length = 218 Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 66/162 (40%), Positives = 104/162 (64%), Gaps = 16/162 (9%) Query: 235 LVLIALKYQLHFDKPVLG-QFN-FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292 LVLIA + +F PV+G N F+ G+ + L+ YTAAFIAE++R+G+++V Sbjct: 66 LVLIAFIF--YFALPVIGITLNGFVAGT----------VTLTVYTAAFIAEVIRAGILSV 113 Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352 +GQMEAA + GLT+ +A V+LPQA++ +IPPL +Q+LNL+KNSS+ + ADL+ Sbjct: 114 AKGQMEAARSSGLTYVQAMYYVVLPQAVKIVIPPLGNQFLNLVKNSSILGIIAGADLMYQ 173 Query: 353 GGTIINQTGQAIEI-ILIWMFIYLSLSIMIALFMNRLNAKIA 393 G I +T ++ I + MF YL L+I +++ + L ++A Sbjct: 174 GDLISTKTFVTFDVYIFVGMF-YLILTIPLSMLVRYLEKRLA 214 >gi|291288058|ref|YP_003504874.1| polar amino acid ABC transporter, inner membrane subunit [Denitrovibrio acetiphilus DSM 12809] gi|290885218|gb|ADD68918.1| polar amino acid ABC transporter, inner membrane subunit [Denitrovibrio acetiphilus DSM 12809] Length = 316 Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 69/211 (32%), Positives = 115/211 (54%), Gaps = 17/211 (8%) Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247 +I ++S I++ + T L+R K L + YI +I G P LV I + Sbjct: 122 EISIYSIFFAIIIGVM-TGLARISKNPFLKKLSVFYIE--IIRGTPLLVQIFI------- 171 Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIA-LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306 F F G+ + E M+ +A LS +T A+IAEIVR+G+ +V +GQMEAA +LG++ Sbjct: 172 ------FYFFIGTVFNLERMTAGVAALSVFTGAYIAEIVRAGIQSVHKGQMEAARSLGMS 225 Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 + KA LV+LPQA R +PP+ Q+++L+K+SSL + DL G ++ T E+ Sbjct: 226 YPKAMVLVILPQAFRRTLPPMAGQFISLIKDSSLVSVISITDLTKAGREVVASTFSPFEV 285 Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 +YL L+ ++ + RL +++ ++ Sbjct: 286 WFTVAALYLVLTSALSYLVQRLEKRMSAMDR 316 >gi|194017220|ref|ZP_03055832.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Bacillus pumilus ATCC 7061] gi|194011088|gb|EDW20658.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Bacillus pumilus ATCC 7061] Length = 217 Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 67/175 (38%), Positives = 105/175 (60%), Gaps = 10/175 (5%) Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279 PL ++ T + + + L+ + + F PVLG V+ F + IAL+ YT+A Sbjct: 49 PLNWLGTAYVEFVRNIPLLLITFVFFFGLPVLG--------IVADGFTAGTIALAIYTSA 100 Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339 FIAE +R+G+ AVP GQMEAA A GL++ R ++LPQA++ +IPPL +Q++NL+KNSS Sbjct: 101 FIAEAIRAGIQAVPLGQMEAARASGLSYGGTMRYIILPQAIKIVIPPLGNQFINLVKNSS 160 Query: 340 -LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393 L V GF DL+ G I ++T ++ + YL L+I ++L + L ++A Sbjct: 161 ILGVIAGF-DLMYQGDLIASRTFVTFDVYIFVAMFYLLLTIPLSLGVGYLEKRLA 214 >gi|227893085|ref|ZP_04010890.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus ultunensis DSM 16047] gi|227865063|gb|EEJ72484.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus ultunensis DSM 16047] Length = 213 Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 73/204 (35%), Positives = 115/204 (56%), Gaps = 20/204 (9%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 +FS +LG+ +L K G+ + +YI+ F +P LV++ + Y L + + Sbjct: 28 IFSLILGVFFALLEVA-----PPKFGRVIAKVYIAIFR--NIPLLVIVMIFY-LIVPRYI 79 Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 + F G+ I L+ YT+AFIAE VR+G+ ++ GQME A + G+T+ +A Sbjct: 80 VKLSGFQAGT----------IGLTLYTSAFIAETVRAGINSIGTGQMEGARSNGMTYTQA 129 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSS-LAVAVGFADLVSVGGTIINQTGQAIEIILI 369 R V+LPQAM+ +IPPL +Q++NL+KNSS LA GF DL+ I T Q I+ +I Sbjct: 130 MRYVILPQAMKIVIPPLGNQFVNLVKNSSVLAFVAGF-DLMYQAQLIAFSTFQTIDTYII 188 Query: 370 WMFIYLSLSIMIALFMNRLNAKIA 393 YL L++ ++ +M L K+A Sbjct: 189 VGLFYLILTLPLSYYMRHLEKKLA 212 Score = 36.6 bits (83), Expect = 7.0, Method: Compositional matrix adjust. Identities = 21/62 (33%), Positives = 32/62 (51%) Query: 88 AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147 A L GF NT + +I + I+G ++ K I +VY+ +FRNIP LV++ Sbjct: 11 AFLTGFWNTILCSIIALIFSLILGVFFALLEVAPPKFGRVIAKVYIAIFRNIPLLVIVMI 70 Query: 148 LY 149 Y Sbjct: 71 FY 72 >gi|229171424|ref|ZP_04299009.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus MM3] gi|228612128|gb|EEK69365.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus MM3] Length = 218 Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 68/165 (41%), Positives = 104/165 (63%), Gaps = 17/165 (10%) Query: 235 LVLIALKYQLHFDKPVLG-QFN-FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292 LVLIA + +F PV+G N F+ G+ L+ YTAAFIAE++R+G+++V Sbjct: 66 LVLIAFIF--YFALPVVGITLNGFVAGTA----------TLTVYTAAFIAEVIRAGILSV 113 Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352 +GQMEAA + GLT+ +A V+LPQAM+ +IPPL +Q+LNL+KNSS+ + DL+ Sbjct: 114 AKGQMEAARSSGLTYTQAMYYVVLPQAMKIVIPPLGNQFLNLVKNSSILGIIAGTDLMYQ 173 Query: 353 GGTIINQTGQAIEI-ILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 G I +T ++ I + MF YL L+I +++ + L ++A KE Sbjct: 174 GDLISTKTFVTFDVYIFVGMF-YLILTIPLSMLVRYLEKRLA-KE 216 >gi|229083878|ref|ZP_04216187.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus Rock3-44] gi|228699456|gb|EEL52132.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus Rock3-44] Length = 233 Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 73/203 (35%), Positives = 118/203 (58%), Gaps = 22/203 (10%) Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252 SF+LGI++++ R F G A Y+ I +P LVLIA + +F PV+G Sbjct: 47 SFILGIIMAVMRIAPIR-FMNWFGTA----YVE--FIRNIP-LVLIA--FVFYFAFPVIG 96 Query: 253 QF--NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 F+ G++ AL+ YTAAFIAE +R+G+++VP+GQMEAA + GLT+ +A Sbjct: 97 VTLNGFVAGTS----------ALTVYTAAFIAEAIRAGIMSVPKGQMEAARSSGLTYVQA 146 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370 V+LPQA++ +IPPL +Q+LNL+KNSS+ + DL+ G I +T ++ + Sbjct: 147 MYYVVLPQAIKIVIPPLGNQFLNLVKNSSILGIIAGTDLMYQGDLISTRTLVTFDVYIFV 206 Query: 371 MFIYLSLSIMIALFMNRLNAKIA 393 YL L++ +++ + ++A Sbjct: 207 GLFYLLLTVPLSMLVRYFEKRLA 229 >gi|315037816|ref|YP_004031384.1| glutamine ABC transporter permease [Lactobacillus amylovorus GRL 1112] gi|325956291|ref|YP_004286901.1| glutamine ABC transporter permease [Lactobacillus acidophilus 30SC] gi|312275949|gb|ADQ58589.1| glutamine ABC transporter permease [Lactobacillus amylovorus GRL 1112] gi|325332856|gb|ADZ06764.1| glutamine ABC transporter permease [Lactobacillus acidophilus 30SC] gi|327183110|gb|AEA31557.1| glutamine ABC transporter permease [Lactobacillus amylovorus GRL 1118] Length = 213 Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 73/204 (35%), Positives = 115/204 (56%), Gaps = 20/204 (9%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 +FS +LG+ +L K G+ + +YI+ F +P LV++ + Y L + + Sbjct: 28 IFSLILGVFFALLKVA-----PPKFGRVIAKVYIAIFR--NIPLLVIVMIFY-LIVPRYI 79 Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 + F G+ I L+ YT+AFIAE VR+G+ ++ GQME A + G+T+ +A Sbjct: 80 VKLSGFQAGT----------IGLTLYTSAFIAETVRAGINSIGTGQMEGARSNGMTYTQA 129 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSS-LAVAVGFADLVSVGGTIINQTGQAIEIILI 369 R V+LPQAM+ +IPPL +Q++NL+KNSS LA GF DL+ I T Q I+ +I Sbjct: 130 MRYVILPQAMKIVIPPLGNQFVNLVKNSSVLAFVAGF-DLMYQAQLIAFSTFQTIDTYII 188 Query: 370 WMFIYLSLSIMIALFMNRLNAKIA 393 YL L++ ++ +M L K+A Sbjct: 189 VGLFYLILTLPLSYYMRHLEKKLA 212 Score = 37.4 bits (85), Expect = 3.9, Method: Compositional matrix adjust. Identities = 21/62 (33%), Positives = 33/62 (53%) Query: 88 AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147 A L GF NT + +I + I+G +++ K I +VY+ +FRNIP LV++ Sbjct: 11 AFLTGFWNTILCSIIALIFSLILGVFFALLKVAPPKFGRVIAKVYIAIFRNIPLLVIVMI 70 Query: 148 LY 149 Y Sbjct: 71 FY 72 >gi|187929542|ref|YP_001900029.1| polar amino acid ABC transporter inner membrane subunit [Ralstonia pickettii 12J] gi|309781683|ref|ZP_07676416.1| glutamate/aspartate ABC transporter, permease protein [Ralstonia sp. 5_7_47FAA] gi|187726432|gb|ACD27597.1| polar amino acid ABC transporter, inner membrane subunit [Ralstonia pickettii 12J] gi|308919324|gb|EFP64988.1| glutamate/aspartate ABC transporter, permease protein [Ralstonia sp. 5_7_47FAA] Length = 231 Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 60/150 (40%), Positives = 90/150 (60%), Gaps = 14/150 (9%) Query: 249 PVLGQ--FNFIGGSTVSPEFM------------SLYIALSCYTAAFIAEIVRSGLIAVPR 294 P+L F + G + PEF+ S IAL YTAA++AE +RSG+ ++P+ Sbjct: 69 PLLAHMLFWYFGAPQILPEFIRDWLYSMNYEAASAVIALVLYTAAYMAEDIRSGIRSIPK 128 Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354 Q+EA+ ALGL+ +A RLV+LPQ++R +PPL SQ LNL KNSS+A+ +G A+L+ Sbjct: 129 EQLEASRALGLSFLQAMRLVVLPQSLRVTVPPLVSQTLNLWKNSSIAMVIGVAELMYQAQ 188 Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALF 384 + + T + E YL++SI I +F Sbjct: 189 QVESATFRGFEAFAFATAAYLTISIAITVF 218 >gi|257887549|ref|ZP_05667202.1| amino acid ABC transporter [Enterococcus faecium 1,141,733] gi|257823603|gb|EEV50535.1| amino acid ABC transporter [Enterococcus faecium 1,141,733] Length = 215 Score = 100 bits (250), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 73/212 (34%), Positives = 113/212 (53%), Gaps = 16/212 (7%) Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL---YISTFLIFGLPTLVLIALKYQL 244 KI +FS VL +V SL L F K + L Y+ F +P L+++ Y + Sbjct: 17 KITLFSSVLALVFSLIIGTLMAIFQLSKNKVVSTLAKAYVEFFR--NIPLLIIVMFFYVV 74 Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304 P+ FN G F + I L+ YT+AFIAE VRSG+ VP+GQ EA ++ G Sbjct: 75 ---VPIY-WFNLDG-------FQAGTIGLTIYTSAFIAETVRSGIQTVPKGQTEAGLSSG 123 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364 T+ + R ++LPQA + +IPPL +Q++NL+KNSS+ V DL+ G I ++T Sbjct: 124 FTYSEIMRYIVLPQAFKIVIPPLGNQFINLVKNSSILAIVAGLDLMYQGDLIASETFNTF 183 Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 + +I YL +++ ++ M L K A++ Sbjct: 184 DTYIIVGLFYLVITLPLSYLMVYLEKKWAVRS 215 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 25/67 (37%), Positives = 41/67 (61%) Query: 83 SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142 +Y + GF T + + ++ + IIGTL+ +LS NK+V+ + + YVE FRNIP L Sbjct: 6 QTYGPIFVDGFKITLFSSVLALVFSLIIGTLMAIFQLSKNKVVSTLAKAYVEFFRNIPLL 65 Query: 143 VVIFFLY 149 +++ F Y Sbjct: 66 IIVMFFY 72 >gi|290968909|ref|ZP_06560446.1| ABC transporter, permease protein [Megasphaera genomosp. type_1 str. 28L] gi|290781205|gb|EFD93796.1| ABC transporter, permease protein [Megasphaera genomosp. type_1 str. 28L] Length = 222 Score = 100 bits (250), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 74/218 (33%), Positives = 123/218 (56%), Gaps = 17/218 (7%) Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240 +T++ A F+LG+V+S+ RLS K KA+ + Y++ ++ G P LV I L Sbjct: 22 VTIEITAISVGLGFILGLVVSV--CRLSGW---KILKAVAVCYVN--ILRGTPLLVQIFL 74 Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300 Y F P+L G ++P F++ A S + A+++EI R+G+ AV RGQMEA Sbjct: 75 IY---FALPMLI------GQRINP-FLAAVAACSINSGAYVSEIFRAGIQAVDRGQMEAG 124 Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 +LGL+ + ++LPQA R +IPPL ++++++ K +SL +GF +L G II +T Sbjct: 125 RSLGLSWMQTMWYIILPQAFRKVIPPLGNEFISMTKETSLVSVIGFEELTRRGQLIIAKT 184 Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 + EI L IYL +++ IA ++ L + A ++ Sbjct: 185 YGSFEIWLTVAAIYLVMTLSIAQLVSYLERRFATDDRN 222 >gi|227551337|ref|ZP_03981386.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus faecium TX1330] gi|257896043|ref|ZP_05675696.1| amino acid ABC transporter [Enterococcus faecium Com12] gi|293378785|ref|ZP_06624942.1| ABC transporter, permease protein [Enterococcus faecium PC4.1] gi|227179548|gb|EEI60520.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus faecium TX1330] gi|257832608|gb|EEV59029.1| amino acid ABC transporter [Enterococcus faecium Com12] gi|292642578|gb|EFF60731.1| ABC transporter, permease protein [Enterococcus faecium PC4.1] Length = 215 Score = 100 bits (250), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 71/216 (32%), Positives = 121/216 (56%), Gaps = 18/216 (8%) Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240 +T+ ++ VFS ++G ++++F +LS++ K AL Y+ F +P L+++ Sbjct: 18 ITLFSSVLALVFSLIIGTLMAIF--QLSKN---KIVSALAKAYVEFFR--NIPLLIIVMF 70 Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300 Y + P+ FN G F + I L+ YT+AFIAE VRSG+ VP+GQ EA Sbjct: 71 FYVV---VPIY-WFNLDG-------FQAGTIGLTIYTSAFIAETVRSGIQTVPKGQTEAG 119 Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 ++ G T+ + R ++LPQA + +IPPL +Q++NL+KNSS+ V DL+ G I ++T Sbjct: 120 LSSGFTYPEIMRYIVLPQAFKIVIPPLGNQFINLVKNSSILAIVAGLDLMYQGDLIASET 179 Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 + +I YL +++ ++ M L K A++ Sbjct: 180 FNTFDTYIIVGLFYLVITLPLSYLMVYLEKKWAVRS 215 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 25/67 (37%), Positives = 41/67 (61%) Query: 83 SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142 +Y + GF T + + ++ + IIGTL+ +LS NK+V+ + + YVE FRNIP L Sbjct: 6 QTYGPIFVDGFKITLFSSVLALVFSLIIGTLMAIFQLSKNKIVSALAKAYVEFFRNIPLL 65 Query: 143 VVIFFLY 149 +++ F Y Sbjct: 66 IIVMFFY 72 >gi|78357807|ref|YP_389256.1| amino acid ABC transporter permease [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78220212|gb|ABB39561.1| amino acid ABC transporter membrane protein 2, PAAT family / amino acid ABC transporter membrane protein 1, PAAT family [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 596 Score = 100 bits (250), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 53/134 (39%), Positives = 85/134 (63%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 EF AL YT +F+AE++R+GL ++P+G +EAA + GL++ + ++LP A R+II Sbjct: 138 EFWCAVSALGVYTGSFMAEVIRAGLQSIPKGLLEAAYSSGLSYFQVLTRIILPLAFRTII 197 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 PPL S++LN +KNSSLA+ +G A+L + + T + E +YLSLS++I+ Sbjct: 198 PPLGSEFLNNMKNSSLAMVIGVAELTWHSQQVQSLTFRGFEATTAATVLYLSLSLIISFI 257 Query: 385 MNRLNAKIALKEKK 398 MN +N K+ L + Sbjct: 258 MNGVNGKLRLDTMQ 271 Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 56/168 (33%), Positives = 96/168 (57%), Gaps = 19/168 (11%) Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALP-LLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251 SF +G+ + L +R F LP L+YI +I G P +++I + ++F PV+ Sbjct: 404 SFFIGLAVGLGRCARNRIFR------LPCLVYIE--IIRGNPLIIVI---FWIYFFLPVV 452 Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311 F F S IAL+ +T A++AEIVR+G+ +P GQ+EAA + GL++ + Sbjct: 453 FGAYF-------DVFWSATIALTVFTGAYLAEIVRAGVQNIPAGQVEAAYSTGLSYFQTM 505 Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359 R ++LPQA++ +IP + Q++ + K++SLA +G +L V + N+ Sbjct: 506 RRIVLPQALKQMIPAIVGQFIAIFKDTSLAFVIGVLELTFVAQGLDNR 553 Score = 42.0 bits (97), Expect = 0.15, Method: Compositional matrix adjust. Identities = 31/93 (33%), Positives = 49/93 (52%), Gaps = 5/93 (5%) Query: 69 GFEIDQGIVPYTSDSSY----ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKL 124 G++ + ++ YT + +Y +L G V T ++ A +GT++G RLSA + Sbjct: 34 GYQFEWSVL-YTQNETYKLNLGAEMLRGLVTTVNISLISSALALGLGTMLGLARLSAFRP 92 Query: 125 VAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLP 157 + V VE FRN P LV +FF Y + +VLP Sbjct: 93 LRISASVVVEFFRNTPLLVQLFFWYFAFPNVLP 125 Score = 38.5 bits (88), Expect = 2.1, Method: Compositional matrix adjust. Identities = 17/40 (42%), Positives = 26/40 (65%) Query: 110 IGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 IG VG GR + N++ C VY+E+ R P ++VIF++Y Sbjct: 407 IGLAVGLGRCARNRIFRLPCLVYIEIIRGNPLIIVIFWIY 446 >gi|229028440|ref|ZP_04184562.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus AH1271] gi|228732889|gb|EEL83749.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus AH1271] Length = 218 Score = 100 bits (250), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 68/165 (41%), Positives = 104/165 (63%), Gaps = 17/165 (10%) Query: 235 LVLIALKYQLHFDKPVLG-QFN-FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292 LVLIA + +F PV+G N F+ G+ L+ YTAAFIAE++R+G+++V Sbjct: 66 LVLIAFIF--YFALPVIGITLNGFVAGTA----------TLTVYTAAFIAEVIRAGILSV 113 Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352 +GQMEAA + GLT+ +A V+LPQAM+ +IPPL +Q+LNL+KNSS+ + DL+ Sbjct: 114 AKGQMEAARSSGLTYVQAMYYVVLPQAMKIVIPPLGNQFLNLVKNSSILGIIAGTDLMYQ 173 Query: 353 GGTIINQTGQAIEI-ILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 G I +T ++ I + MF YL L+I +++ + L ++A KE Sbjct: 174 GDLISTKTFVTFDVYIFVGMF-YLILTIPLSMLVRYLEKRLA-KE 216 >gi|42779787|ref|NP_977034.1| amino acid ABC transporter, permease protein [Bacillus cereus ATCC 10987] gi|206978169|ref|ZP_03239051.1| amino acid ABC transporter, permease protein [Bacillus cereus H3081.97] gi|42735704|gb|AAS39642.1| amino acid ABC transporter, permease protein [Bacillus cereus ATCC 10987] gi|206743641|gb|EDZ55066.1| amino acid ABC transporter, permease protein [Bacillus cereus H3081.97] Length = 218 Score = 100 bits (250), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 68/165 (41%), Positives = 105/165 (63%), Gaps = 17/165 (10%) Query: 235 LVLIALKYQLHFDKPVLG-QFN-FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292 LVLIA + +F PV+G N F+ G+ + L+ YTAAFIAE++R+G+++V Sbjct: 66 LVLIAFIF--YFALPVIGITLNGFVAGT----------VTLTVYTAAFIAEVIRAGILSV 113 Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352 +GQMEAA + GLT+ +A V+LPQAM+ +IPPL +Q+LNL+KNSS+ + DL+ Sbjct: 114 AKGQMEAARSSGLTYTQAMYHVVLPQAMKIVIPPLGNQFLNLVKNSSILGIIAGMDLMYQ 173 Query: 353 GGTIINQTGQAIEI-ILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 G I +T ++ I + MF YL L+I +++ + L ++A KE Sbjct: 174 GDLISTKTFVTFDVYIFVGMF-YLILTIPLSMLVRYLEKRLA-KE 216 >gi|323702153|ref|ZP_08113820.1| polar amino acid ABC transporter, inner membrane subunit [Desulfotomaculum nigrificans DSM 574] gi|323532840|gb|EGB22712.1| polar amino acid ABC transporter, inner membrane subunit [Desulfotomaculum nigrificans DSM 574] Length = 221 Score = 100 bits (250), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 49/129 (37%), Positives = 87/129 (67%), Gaps = 1/129 (0%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +A S + A++AEI R+G+ ++ RGQMEAA +LG+T+ +A R ++LPQA + +IPPL ++ Sbjct: 93 VACSLNSGAYVAEIFRAGIQSIERGQMEAARSLGMTYAQAMRYIILPQAFKRVIPPLGNE 152 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA-LFMNRLN 389 ++ ++K++SL +G A+L G II T +AIEI L IYL ++++I+ F++R+ Sbjct: 153 FIAMMKDTSLVSVIGLAELARTGQLIIATTYRAIEIWLAVALIYLIMTLLISHFFVHRME 212 Query: 390 AKIALKEKK 398 ++ + Sbjct: 213 RRLKTSDHS 221 >gi|322418598|ref|YP_004197821.1| polar amino acid ABC transporter inner membrane subunit [Geobacter sp. M18] gi|320124985|gb|ADW12545.1| polar amino acid ABC transporter, inner membrane subunit [Geobacter sp. M18] Length = 234 Score = 100 bits (250), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 68/213 (31%), Positives = 124/213 (58%), Gaps = 11/213 (5%) Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI-STFLIFGLPTLVLIA 239 +T++ +A V +F+LG+++++ ++S HF PL +I S +L F T +LI Sbjct: 26 ITLELSAVGIVGAFILGLLIAVL--KMS-HFR-------PLRWIASAYLEFFRNTPLLIQ 75 Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299 + + +L ++ + EF + IAL+ YT+AFIAE +RSG++++P+ QMEA Sbjct: 76 IFFWYFGSYKILPTVVNDWLNSTNFEFAAAAIALTIYTSAFIAEDIRSGILSIPKEQMEA 135 Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359 A + G ++ ++ + ++LPQA+R +PPL +Q+LNL KNSSLA+ +G +L + + Sbjct: 136 ARSAGFSYLRSMQYIILPQAVRITVPPLVNQFLNLTKNSSLAMTIGVMELTYQARQVESY 195 Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 + + E +YL LS+ I ++ + K+ Sbjct: 196 SFKGFEAFTAATVVYLVLSVSITALIDLYDKKV 228 Score = 44.7 bits (104), Expect = 0.027, Method: Compositional matrix adjust. Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 6/88 (6%) Query: 76 IVPYTSDSSYATA------ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWIC 129 ++ YT D S T+ ++ G T L+ G++ A I+G L+ ++S + + WI Sbjct: 1 MLKYTFDWSIVTSGKYFEWLVSGVKITLELSAVGIVGAFILGLLIAVLKMSHFRPLRWIA 60 Query: 130 RVYVEVFRNIPPLVVIFFLYKSVLSVLP 157 Y+E FRN P L+ IFF Y +LP Sbjct: 61 SAYLEFFRNTPLLIQIFFWYFGSYKILP 88 >gi|2961080|gb|AAC05644.1| unknown [Pseudomonas marginalis pv. alfalfae] Length = 154 Score = 100 bits (250), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 60/102 (58%), Positives = 73/102 (71%), Gaps = 5/102 (4%) Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 L FNF+GG + PE ++L +AL+ YTAAFIAEIVRSG+ +V GQ EAA +LGL Sbjct: 2 LSGFNFVGGWVLIPELLALTLALTVYTAAFIAEIVRSGIKSVSHGQTEAARSLGLRPGPT 61 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV-----GFA 347 R V++PQA+R IIPPLTSQYLNL KNSSLA + GFA Sbjct: 62 LRKVIIPQALRVIIPPLTSQYLNLAKNSSLAAGIRLPGNGFA 103 >gi|326797152|ref|YP_004314972.1| polar amino acid ABC transporter inner membrane subunit [Marinomonas mediterranea MMB-1] gi|326547916|gb|ADZ93136.1| polar amino acid ABC transporter, inner membrane subunit [Marinomonas mediterranea MMB-1] Length = 315 Score = 100 bits (250), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 70/205 (34%), Positives = 110/205 (53%), Gaps = 23/205 (11%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 +FS +LG++ L R+S H + + L + Y+ +I G P LV I + Y Sbjct: 129 IFSIILGLIFGLM--RIS---HRQVLRNLAVTYVE--VIRGTPLLVQIFIVY-------- 173 Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 FIG F + ALS +T A++AEIVR+G+ AVP GQMEAA +LG+ + +A Sbjct: 174 ----FFIGTVFDLDRFTAGVAALSIFTGAYVAEIVRAGIQAVPTGQMEAARSLGMNYVQA 229 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370 V++PQA++ +PPL Q++NL+K+SSL + DL G +++ + E+ Sbjct: 230 MCYVVMPQAIKRTLPPLAGQFINLIKDSSLVSVISITDLTKAGREVVSGSFAPFEVWFTV 289 Query: 371 MFIYL----SLSIMIALFMNRLNAK 391 +YL +LS I + RL+A Sbjct: 290 AALYLVVTGALSWAIQILEQRLSAS 314 >gi|145298524|ref|YP_001141365.1| ABC-type amino acid transporter, permease protein [Aeromonas salmonicida subsp. salmonicida A449] gi|142851296|gb|ABO89617.1| ABC-type amino acid transporter, permease protein [Aeromonas salmonicida subsp. salmonicida A449] Length = 319 Score = 100 bits (250), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 59/166 (35%), Positives = 94/166 (56%), Gaps = 5/166 (3%) Query: 233 PTLVLIALKY-QLHFDKPVLGQ----FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287 P L +A+ Y +L P+L Q + FIG F + AL+ +T A++AEIVR+ Sbjct: 151 PALRNLAVTYVELIRGTPLLVQIFIVYFFIGTVLNLDRFTAGVAALAVFTGAYVAEIVRA 210 Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347 G+ ++ +GQMEA +LGLT + R V+LPQA + ++PPL Q++NL+K+SSL + Sbjct: 211 GISSIHKGQMEAGRSLGLTSAQTMRYVILPQAFKRVLPPLAGQFINLIKDSSLVSVISIT 270 Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393 DL G +++ T E+ +YL L+ ++ + RL K A Sbjct: 271 DLTKAGREVVSSTFSPFEVWFTVALLYLVLTGTLSFLVRRLEVKYA 316 >gi|241663661|ref|YP_002982021.1| polar amino acid ABC transporter inner membrane subunit [Ralstonia pickettii 12D] gi|240865688|gb|ACS63349.1| polar amino acid ABC transporter, inner membrane subunit [Ralstonia pickettii 12D] Length = 231 Score = 100 bits (250), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 58/143 (40%), Positives = 87/143 (60%), Gaps = 12/143 (8%) Query: 254 FNFIGGSTVSPEFM------------SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301 F + G + PEF+ S IAL YTAA++AE +RSG+ ++P+ Q+EA+ Sbjct: 76 FWYFGAPQILPEFIRDWLYSMNYEAASAVIALVLYTAAYMAEDIRSGIRSIPKEQLEASR 135 Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361 ALGL+ +A RLV+LPQ++R +PPL SQ LNL KNSS+A+ +G A+L+ + + T Sbjct: 136 ALGLSFLQAMRLVVLPQSLRVTVPPLVSQTLNLWKNSSIAMVIGVAELMYQAQQVESATF 195 Query: 362 QAIEIILIWMFIYLSLSIMIALF 384 + E YL++SI I +F Sbjct: 196 RGFEAFAFATAAYLTISIAITVF 218 >gi|167581948|ref|ZP_02374822.1| binding-protein-dependent transport system inner membrane component [Burkholderia thailandensis TXDOH] Length = 241 Score = 100 bits (249), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 60/149 (40%), Positives = 88/149 (59%), Gaps = 18/149 (12%) Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFN-----FIGGSTV---SPEFMSLYI 271 PL+ F FG+ +L+ +PV+ N +GG + S EF++ ++ Sbjct: 64 PLVVQLLFWYFGVASLL----------PEPVMAWLNTRRAAVVGGVELHWPSFEFVAGWV 113 Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 LSCYT+AF+AE ++GL VP GQ AA ALGL+ R+ R V+LPQA+R +PPL QY Sbjct: 114 GLSCYTSAFVAEEFQAGLRGVPAGQYRAAGALGLSPRQTFRFVVLPQAVRIALPPLFGQY 173 Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQT 360 +NL+KNSSL +A+G A+L + +T Sbjct: 174 MNLIKNSSLTMAIGVAELSYASRQVETET 202 >gi|229101401|ref|ZP_04232145.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus Rock3-28] gi|228682106|gb|EEL36239.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus Rock3-28] Length = 218 Score = 100 bits (249), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 67/165 (40%), Positives = 105/165 (63%), Gaps = 17/165 (10%) Query: 235 LVLIALKYQLHFDKPVLG-QFN-FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292 LVLIA + +F PV+G N F+ G+ + L+ YTAAFIAE++R+G+++V Sbjct: 66 LVLIAFIF--YFALPVIGITLNGFVAGT----------LTLTVYTAAFIAEVIRAGILSV 113 Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352 +GQMEAA + GLT+ + ++LPQAM+ +IPPL +Q+LNL+KNSS+ + ADL+ Sbjct: 114 AKGQMEAARSSGLTYVQGMYYIVLPQAMKIVIPPLGNQFLNLVKNSSILGIIAGADLMYQ 173 Query: 353 GGTIINQTGQAIEI-ILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 G I +T ++ I + MF YL L+I +++ + L ++A KE Sbjct: 174 GDLISTKTFVTFDVYIFVGMF-YLILTIPLSMLVRYLEKRLA-KE 216 >gi|320177111|gb|EFW52127.1| putative amino-acid ABC transporter permease protein yhdX [Shigella dysenteriae CDC 74-1112] Length = 155 Score = 100 bits (249), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 59/141 (41%), Positives = 82/141 (58%) Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229 FL+NRGL P+ + F+ + V+ IVLS+ R ++ + KT + + LI Sbjct: 8 FLSNRGLYIPSPQLGDGFIAFILAVVMAIVLSVGLFRFNKTYQIKTRQLRRTWPFAAVLI 67 Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289 GLP L LH+D P L FNF GG + PE +L +ALS YT+AFIAEI+R+G Sbjct: 68 IGLPLLAQWLFGAALHWDVPALRGFNFRGGMVLIPELAALTLALSVYTSAFIAEIIRAGS 127 Query: 290 IAVPRGQMEAAIALGLTHRKA 310 AVP GQ EAA +LGL + ++ Sbjct: 128 QAVPYGQHEAARSLGLRYARS 148 >gi|229188846|ref|ZP_04315880.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus ATCC 10876] gi|228594659|gb|EEK52444.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus ATCC 10876] Length = 218 Score = 100 bits (249), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 67/165 (40%), Positives = 106/165 (64%), Gaps = 17/165 (10%) Query: 235 LVLIALKYQLHFDKPVLG-QFN-FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292 LVLIA + +F PV+G N F+ G+ + L+ YTAAFIAE++R+G+++V Sbjct: 66 LVLIAFIF--YFALPVIGITLNGFVAGT----------VTLTVYTAAFIAEVIRAGILSV 113 Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352 +GQMEAA + GLT+ +A V+LPQA++ +IPPL +Q+LNL+KNSS+ + +DL+ Sbjct: 114 AKGQMEAARSSGLTYVQAMYYVVLPQAVKIVIPPLGNQFLNLVKNSSILGIIAGSDLMYQ 173 Query: 353 GGTIINQTGQAIEI-ILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 G I +T ++ I + MF YL L+I +++ + L ++A KE Sbjct: 174 GDLISTKTFVTFDVYIFVGMF-YLILTIPLSMLVRYLEKRLA-KE 216 >gi|222094395|ref|YP_002528454.1| ABC transporter , permease; glutamine ABC transporter , permease [Bacillus cereus Q1] gi|221238452|gb|ACM11162.1| ABC transporter, permease; probable glutamine ABC transporter, permease [Bacillus cereus Q1] Length = 177 Score = 100 bits (249), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 67/165 (40%), Positives = 105/165 (63%), Gaps = 17/165 (10%) Query: 235 LVLIALKYQLHFDKPVLG-QFN-FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292 LVLIA + +F PV+G N F+ G+ + L+ YTAAFIAE++R+G+++V Sbjct: 25 LVLIAFIF--YFALPVVGITLNGFVAGT----------VTLTVYTAAFIAEVIRAGILSV 72 Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352 +GQMEAA + GLT+ + ++LPQAM+ +IPPL +Q+LNL+KNSS+ + ADL+ Sbjct: 73 AKGQMEAARSSGLTYVQGMYYIVLPQAMKIVIPPLGNQFLNLVKNSSILGIIAGADLMYQ 132 Query: 353 GGTIINQTGQAIEI-ILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 G I +T ++ I + MF YL L+I +++ + L ++A KE Sbjct: 133 GDLISTKTFVTFDVYIFVGMF-YLILTIPLSMLVRYLEKRLA-KE 175 >gi|330830267|ref|YP_004393219.1| amino acid ABC transporter permease [Aeromonas veronii B565] gi|328805403|gb|AEB50602.1| Amino acid ABC transporter, permease protein [Aeromonas veronii B565] Length = 319 Score = 100 bits (249), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 58/166 (34%), Positives = 94/166 (56%), Gaps = 5/166 (3%) Query: 233 PTLVLIALKY-QLHFDKPVLGQ----FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287 P L +A+ Y +L P+L Q + FIG F + AL+ +T A++AEIVR+ Sbjct: 151 PALRNLAITYVELIRGTPLLVQIFIVYFFIGTVLNLDRFTAGVAALAVFTGAYVAEIVRA 210 Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347 G+ ++ +GQMEA +LG+T + R V+LPQA + ++PPL Q++NL+K+SSL + Sbjct: 211 GISSIHKGQMEAGRSLGMTSAQTMRYVILPQAFKRVLPPLAGQFINLIKDSSLVSVISIT 270 Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393 DL G +++ T E+ +YL L+ ++ + RL K A Sbjct: 271 DLTKAGREVVSSTFSPFEVWFTVALLYLVLTGTLSFLVRRLEVKYA 316 Score = 36.2 bits (82), Expect = 9.5, Method: Compositional matrix adjust. Identities = 29/87 (33%), Positives = 40/87 (45%), Gaps = 6/87 (6%) Query: 69 GFEIDQGIVPYTSD------SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN 122 G ++ +G + D S A I G T L+ I A ++GTL G RLS N Sbjct: 91 GVQVAEGDTVFRGDTLDTQLSWTAGPIAWGVWVTVKLSLVAGIFAILLGTLAGLARLSPN 150 Query: 123 KLVAWICRVYVEVFRNIPPLVVIFFLY 149 + + YVE+ R P LV IF +Y Sbjct: 151 PALRNLAITYVELIRGTPLLVQIFIVY 177 >gi|303256934|ref|ZP_07342948.1| glutamine ABC transporter, permease protein [Burkholderiales bacterium 1_1_47] gi|330998815|ref|ZP_08322542.1| glutamine ABC transporter, permease protein GlnP [Parasutterella excrementihominis YIT 11859] gi|302860425|gb|EFL83502.1| glutamine ABC transporter, permease protein [Burkholderiales bacterium 1_1_47] gi|329576029|gb|EGG57548.1| glutamine ABC transporter, permease protein GlnP [Parasutterella excrementihominis YIT 11859] Length = 223 Score = 100 bits (248), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 70/211 (33%), Positives = 119/211 (56%), Gaps = 13/211 (6%) Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247 +I S LG+++ +F +++ + + L +Y+ I G P LV I L Y F Sbjct: 26 EITALSVGLGLLIGMFVG-VAKLSDNRLIRGLASVYVDC--IRGTPLLVQIFLVY---FA 79 Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307 P I G + P F++ A S + A++AEI R+G+ ++ +GQMEA+ ALGL Sbjct: 80 LPQ------IIGHRIDP-FVAAVGACSINSGAYVAEIFRAGIQSIDKGQMEASRALGLNW 132 Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367 +A R V++PQA + IIPPL ++++ +LK+SSL +GF +L G II++T A EI Sbjct: 133 FQAMRFVIMPQAFKRIIPPLGNEFIAMLKDSSLVSVIGFEELTRTGQLIISRTYAAFEIW 192 Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 ++ +YL +++ I+ F+ L + + +K Sbjct: 193 IVVALLYLIMTLAISRFVALLEKRFSKGTRK 223 Score = 38.9 bits (89), Expect = 1.6, Method: Compositional matrix adjust. Identities = 18/41 (43%), Positives = 25/41 (60%) Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 +IG VG +LS N+L+ + VYV+ R P LV IF +Y Sbjct: 37 LIGMFVGVAKLSDNRLIRGLASVYVDCIRGTPLLVQIFLVY 77 >gi|218678602|ref|ZP_03526499.1| putative amino acid ABC transporter, permease protein [Rhizobium etli CIAT 894] Length = 134 Score = 100 bits (248), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 51/115 (44%), Positives = 79/115 (68%) Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327 +L +A+ +A+FIAE VR + A+P+ Q EAA +LGL+ R ++LPQ R ++P Sbjct: 3 ALLLAIVVSSASFIAETVRGAIDALPKAQWEAAGSLGLSRRDTVNDIILPQVFRVVLPSF 62 Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382 +QY++L KN++L +AVG+ DL ++ GTI NQTG ++E I+I M YL LS +I+ Sbjct: 63 GNQYISLTKNTALGIAVGYPDLFNIYGTIANQTGHSLEGIIIVMASYLILSWIIS 117 >gi|226942879|ref|YP_002797952.1| Amino acid ABC transporter permease [Azotobacter vinelandii DJ] gi|226717806|gb|ACO76977.1| Amino acid ABC transporter, permease protein [Azotobacter vinelandii DJ] Length = 247 Score = 100 bits (248), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 55/135 (40%), Positives = 83/135 (61%) Query: 260 STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319 S + ++S+ + L +TAA + E VR+G+ A+PRGQ AA ALGL + R VLLPQA Sbjct: 105 SPATSAYLSVVVCLGLFTAARVCEQVRTGIQALPRGQTAAAQALGLRSGQIYRQVLLPQA 164 Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379 R IIPPLTS++LN++KNSS+A +G +L++ T E + IY +L++ Sbjct: 165 FRIIIPPLTSEFLNIIKNSSVASLIGLMELLAQTRQTAEFTTNLFEAFTLATLIYFTLNM 224 Query: 380 MIALFMNRLNAKIAL 394 + LFM + K+A+ Sbjct: 225 SLMLFMRWIEKKVAV 239 Score = 41.6 bits (96), Expect = 0.21, Method: Compositional matrix adjust. Identities = 30/79 (37%), Positives = 43/79 (54%) Query: 81 SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140 D Y + GF T +A G I A ++G+L+G R N+ ++ I YVE+FRN+P Sbjct: 17 GDEIYLDWFVAGFGWTLAVALVGWIIALLLGSLLGVLRTLPNRWLSGIASAYVELFRNVP 76 Query: 141 PLVVIFFLYKSVLSVLPIP 159 LV +F Y V +LP P Sbjct: 77 LLVQLFLWYFLVPDLLPTP 95 >gi|133723150|gb|ABO37821.1| GlnP [Lactococcus garvieae] Length = 237 Score = 100 bits (248), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 61/209 (29%), Positives = 112/209 (53%), Gaps = 23/209 (11%) Query: 190 FVFSFVLGIVLSLF------ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243 FV + ++G++ LF A R + +++PLL ++ F+ +G+P ++ + +Q Sbjct: 45 FVLAMIVGVIFGLFSASPSPALRTISRIYVDLNRSIPLLVLTIFIFYGIPNMLQLITGHQ 104 Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 + EF + IAL+ +A+IAEIVR G+ AVP GQMEA+ +L Sbjct: 105 SPLN-----------------EFTAGVIALTLNESAYIAEIVRGGIAAVPTGQMEASRSL 147 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363 G+ + K R V+LPQA++ IP L +Q++ LK+++L +G +L+ G I+ + QA Sbjct: 148 GIPYVKTMRKVILPQAVKITIPSLINQFIITLKDTTLVSVIGLVELLQAGQIIVARNFQA 207 Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392 + + IY+ + +++ R+ K+ Sbjct: 208 FRVYGLIGLIYMVVLLLLMWAGRRIEQKM 236 >gi|296389384|ref|ZP_06878859.1| putative amino acid permease [Pseudomonas aeruginosa PAb1] Length = 238 Score = 100 bits (248), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 64/172 (37%), Positives = 96/172 (55%), Gaps = 10/172 (5%) Query: 220 PLLYISTFLIFGLPTLVLIALKYQLH--FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT 277 PLL F FG+P L+ AL L+ + P+L +F EF++ L+ YT Sbjct: 65 PLLVQLFFWYFGVPALLPEALVSWLNTPHETPLLDWPSF--------EFLAAAWGLTLYT 116 Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 +AF+AE R+G+ +V Q A +ALGLT R+ R+V+LPQA+R+ +PPL QY+N LKN Sbjct: 117 SAFVAEEFRAGIASVRPEQRAAGLALGLTQRQVWRVVVLPQALRTALPPLLGQYMNALKN 176 Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 SSLA+A+G A+L + +T + + I +Y+ +I F L Sbjct: 177 SSLAMAIGLAELSYASRQVETETFKTFQAFGIATLLYIGAIALIEAFGQALQ 228 Score = 45.1 bits (105), Expect = 0.018, Method: Compositional matrix adjust. Identities = 21/48 (43%), Positives = 30/48 (62%) Query: 110 IGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLP 157 IG + RLS +L++W R Y+ +FRN P LV +FF Y V ++LP Sbjct: 35 IGAPLAIARLSRRRLLSWPARAYLALFRNTPLLVQLFFWYFGVPALLP 82 >gi|89072893|ref|ZP_01159450.1| putative amino acid ABC transporter, permease protein [Photobacterium sp. SKA34] gi|89051415|gb|EAR56870.1| putative amino acid ABC transporter, permease protein [Photobacterium sp. SKA34] Length = 272 Score = 100 bits (248), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 72/213 (33%), Positives = 115/213 (53%), Gaps = 19/213 (8%) Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240 +T+ +A +F+ + G+V +L RLS H G++L YI +I P LV I L Sbjct: 75 ITIKISAISLIFTVIFGLVTALL--RLS---HSIVGRSLARGYIE--VIRNTPLLVQIYL 127 Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300 Y + PVLG F + + LS + A+ AEI RSGL+ +P+GQ EAA Sbjct: 128 LYFVF--GPVLGL----------ERFTTAVLGLSLFQGAYTAEIFRSGLMNIPKGQFEAA 175 Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 +LGL+ + R ++LPQ +R I+P LT++ ++L+KNSS+ + DL + G I+ T Sbjct: 176 ESLGLSKVDSYRYIILPQMLRRILPALTNEAVSLVKNSSIVSIMAIFDLTTQGRDIVADT 235 Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393 EI +YL ++++++ F L K+A Sbjct: 236 AMPFEIWFTIAAMYLCITLLLSAFATLLEHKLA 268 >gi|117620284|ref|YP_857306.1| amino acid ABC transporter, permease protein [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117561691|gb|ABK38639.1| amino acid ABC transporter, permease protein [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 326 Score = 100 bits (248), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 58/166 (34%), Positives = 94/166 (56%), Gaps = 5/166 (3%) Query: 233 PTLVLIALKY-QLHFDKPVLGQ----FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287 P L +A+ Y +L P+L Q + FIG F + AL+ +T A++AEIVR+ Sbjct: 158 PALRNLAVTYVELIRGTPLLVQIFIVYFFIGTVLNLDRFTAGVAALAVFTGAYVAEIVRA 217 Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347 G+ ++ +GQMEA +LG+T + R V+LPQA + ++PPL Q++NL+K+SSL + Sbjct: 218 GISSIHKGQMEAGRSLGMTSAQTMRYVILPQAFKRVLPPLAGQFINLIKDSSLVSVISIT 277 Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393 DL G +++ T E+ +YL L+ ++ + RL K A Sbjct: 278 DLTKAGREVVSSTFSPFEVWFTVALLYLVLTGTLSFLVRRLEVKYA 323 >gi|291298120|ref|YP_003509398.1| polar amino acid ABC transporter inner membrane subunit [Stackebrandtia nassauensis DSM 44728] gi|290567340|gb|ADD40305.1| polar amino acid ABC transporter, inner membrane subunit [Stackebrandtia nassauensis DSM 44728] Length = 285 Score = 99.8 bits (247), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 80/236 (33%), Positives = 128/236 (54%), Gaps = 42/236 (17%) Query: 177 SFPTL-------TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEK---TG-----KALPL 221 SFP L T+ A +V F LGI++++ RLS + TG + LP Sbjct: 70 SFPELFTVALANTVIYTASGYVVGFALGILIAVM--RLSSAAVNRWIATGFIEIFRGLPA 127 Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281 L I TFL F P + F ++ N+ TV+ + L +AA++ Sbjct: 128 LLILTFLAFFWP----------VAFPNLIIPGGNY---GTVA-------LGLGLCSAAYM 167 Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341 AE R+G+ AVP+GQMEAA +LG++H +A ++LPQA+R +IPPLT++ + L K+SSL Sbjct: 168 AETFRAGIQAVPKGQMEAARSLGMSHTRAMVTIILPQAVRIVIPPLTNELILLTKDSSLV 227 Query: 342 VAVGFA----DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393 + VG A DLV G + N+TG + +++ + +L ++I +++ + RL A+ A Sbjct: 228 LTVGIAAKESDLVKFGNDLANETGNSTPLVVAGL-AFLVITIPLSILVRRLEARQA 282 Score = 38.1 bits (87), Expect = 2.4, Method: Compositional matrix adjust. Identities = 20/67 (29%), Positives = 34/67 (50%) Query: 82 DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141 + S+ V NT SG + +G L+ RLS+ + WI ++E+FR +P Sbjct: 68 ERSFPELFTVALANTVIYTASGYVVGFALGILIAVMRLSSAAVNRWIATGFIEIFRGLPA 127 Query: 142 LVVIFFL 148 L+++ FL Sbjct: 128 LLILTFL 134 >gi|17230679|ref|NP_487227.1| glutamine-binding periplasmic protein of glutamine ABC transporter [Nostoc sp. PCC 7120] gi|17132282|dbj|BAB74886.1| glutamine-binding periplasmic protein of glutamine ABC transporter [Nostoc sp. PCC 7120] Length = 501 Score = 99.8 bits (247), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 86/284 (30%), Positives = 145/284 (51%), Gaps = 42/284 (14%) Query: 130 RVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDT--NA 187 ++Y + F+ PP + LY++ + +++L F PTL Sbjct: 242 QIYQKWFKVEPPSLPDKSLYENQTNTHKSGSINLILQF----------LPTLLQGALVTI 291 Query: 188 KIFVFSFVLGIVL-SLFA-TRLSRHFHEKTGKALPLLYISTFLIF--GLPTLVLIALKYQ 243 ++ + S VLG++ +L A TRLS+ + L+ ++ F G P LV I + Sbjct: 292 QLTILSTVLGLICGTLIALTRLSQFTPAR-------LFARAYVDFFRGTPLLVQI---FM 341 Query: 244 LHFDKPVLGQ-----FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQME 298 ++F P L Q FNF +++ IALS AA+IAEIVR+G+ ++ GQ E Sbjct: 342 IYFGIPALAQQLGFTFNF-------DRWVAGVIALSVNAAAYIAEIVRAGIQSIETGQTE 394 Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN 358 AA +LGL RLV+ PQA R ++PPL +++++LLK++SL +GF +L G I+ Sbjct: 395 AAKSLGLNPWLTMRLVIFPQAFRRMLPPLGNEFISLLKDTSLVAVIGFEELFRKGQLIVA 454 Query: 359 QTGQAIEIILIWMFIYLSLSIMIALFMNRL----NAKIALKEKK 398 +A EI +YL L+++ + ++RL N + +++K Sbjct: 455 DNYRAFEIYAAVAIVYLCLTLLASQVLSRLEMWMNPTMKAQQRK 498 >gi|295398549|ref|ZP_06808582.1| glutamine ABC superfamily ATP binding cassette transporter, permease protein [Aerococcus viridans ATCC 11563] gi|294973213|gb|EFG49007.1| glutamine ABC superfamily ATP binding cassette transporter, permease protein [Aerococcus viridans ATCC 11563] Length = 217 Score = 99.8 bits (247), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 51/133 (38%), Positives = 88/133 (66%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F S I L+ YT+AFIA++VRSG+ AVP GQ EAAI+ G+T+ + + V+LPQA++ +IP Sbjct: 85 FQSGIIGLTLYTSAFIADVVRSGIDAVPEGQKEAAISQGMTYVQTMQYVVLPQAVKIVIP 144 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PL +Q++NL+KNSS+ V DL+ G I ++T + + +YL +++ + L + Sbjct: 145 PLGNQFINLVKNSSILAMVAGLDLMYYGDLIASETFNTLGTYTMIAGMYLVITVPLTLLV 204 Query: 386 NRLNAKIALKEKK 398 + + ++A ++ + Sbjct: 205 SYIEKRLAQQDVR 217 Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 27/67 (40%), Positives = 43/67 (64%) Query: 83 SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142 ++Y+ I+ GF+NT + +I + I+G LVG + NK++A I +YVE FRNIP L Sbjct: 6 TNYSDLIIEGFINTLIASVIALIASLILGGLVGIFQTLDNKVLAKIGDIYVEFFRNIPLL 65 Query: 143 VVIFFLY 149 +++ F Y Sbjct: 66 IIVMFFY 72 >gi|319946946|ref|ZP_08021180.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus australis ATCC 700641] gi|319746994|gb|EFV99253.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus australis ATCC 700641] Length = 754 Score = 99.8 bits (247), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 62/210 (29%), Positives = 110/210 (52%), Gaps = 27/210 (12%) Query: 190 FVFSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243 F + V+GI+ +F+ R + + +PL+ ++ F+ +G+P L+ +Q Sbjct: 562 FAIAMVIGIIFGMFSVSPYKWLRWTAEIFVDVIRGIPLMILAAFIFWGIPNLIESMTGHQ 621 Query: 244 LHFDKPVLGQFNFIGGSTVSP--EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301 SP +F++ IALS AA+IAEIVR G+ AVP GQMEA+ Sbjct: 622 -------------------SPINDFLAGTIALSLNAAAYIAEIVRGGIQAVPAGQMEASR 662 Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361 +LG+++ K R ++LPQA + ++P +Q++ LK++++ A+G +L G II + Sbjct: 663 SLGISYSKTMRKIILPQATKLMLPNFVNQFVIALKDTTIVSAIGLVELFQTGKIIIARNY 722 Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 Q+ ++ I YL + ++ F RL + Sbjct: 723 QSFKMYAILAVFYLVIITLLTRFAKRLEKR 752 >gi|312865954|ref|ZP_07726175.1| lysine-arginine-ornithine-binding periplasmic protein [Streptococcus downei F0415] gi|311098358|gb|EFQ56581.1| lysine-arginine-ornithine-binding periplasmic protein [Streptococcus downei F0415] Length = 731 Score = 99.8 bits (247), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 64/211 (30%), Positives = 110/211 (52%), Gaps = 27/211 (12%) Query: 190 FVFSFVLGIVLSLFATRLSRHFHE------KTGKALPLLYISTFLIFGLPTLVLIALKYQ 243 F + V+GI+ + A ++ + +PL+ ++ F+ +G+P L+ +Q Sbjct: 539 FAIAMVIGIIFGMMAVAPNKILQGIAKVFVDVVRGIPLMIVAAFIYWGIPNLIESITGHQ 598 Query: 244 LHFDKPVLGQFNFIGGSTVSP--EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301 SP +F++ IALS AA+IAEIVR G+ AVP+GQMEA+ Sbjct: 599 -------------------SPINDFVAATIALSLNAAAYIAEIVRGGIEAVPKGQMEASR 639 Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361 +LG+ + K R V+LPQA+R ++P +Q++ LK++++ A+G +L G II + Sbjct: 640 SLGIPYGKTMRKVILPQAVRVMLPNFINQFVISLKDTTIVSAIGLVELFQTGKIIIARNY 699 Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 Q+ + I IYL + ++ RL K+ Sbjct: 700 QSFRMYAILAIIYLVIITLLTRLAKRLERKL 730 >gi|260102750|ref|ZP_05752987.1| glutamine ABC superfamily ATP binding cassette transporter, permease protein [Lactobacillus helveticus DSM 20075] gi|260083443|gb|EEW67563.1| glutamine ABC superfamily ATP binding cassette transporter, permease protein [Lactobacillus helveticus DSM 20075] Length = 213 Score = 99.8 bits (247), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 72/204 (35%), Positives = 115/204 (56%), Gaps = 20/204 (9%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 +FS +LG+ +L K GK + +YI+ F +P LV++ + Y L + + Sbjct: 28 IFSLILGVFFALLEVA-----PTKFGKIVAKVYIAIFR--NIPLLVIVMIFY-LIVPRYI 79 Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 + F G+ I L+ YT+AFIAE VR+G+ ++ GQME A + G+T+ +A Sbjct: 80 VKLSGFQAGT----------IGLTLYTSAFIAETVRAGISSISTGQMEGARSNGMTYTQA 129 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSS-LAVAVGFADLVSVGGTIINQTGQAIEIILI 369 R V+LPQAM+ +IPPL +Q++NL+KNSS LA GF DL+ I T + I+ ++ Sbjct: 130 MRYVILPQAMKIVIPPLGNQFVNLVKNSSVLAFVAGF-DLMYQAQLIAFSTFRTIDTYVV 188 Query: 370 WMFIYLSLSIMIALFMNRLNAKIA 393 YL L++ ++ +M L K+A Sbjct: 189 VGLFYLILTLPLSYYMRHLEKKLA 212 Score = 36.2 bits (82), Expect = 8.8, Method: Compositional matrix adjust. Identities = 19/62 (30%), Positives = 32/62 (51%) Query: 88 AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147 + L GF NT + +I + I+G ++ K + +VY+ +FRNIP LV++ Sbjct: 11 SFLTGFWNTILCSIIALIFSLILGVFFALLEVAPTKFGKIVAKVYIAIFRNIPLLVIVMI 70 Query: 148 LY 149 Y Sbjct: 71 FY 72 >gi|148544725|ref|YP_001272095.1| polar amino acid ABC transporter, inner membrane subunit [Lactobacillus reuteri DSM 20016] gi|184154077|ref|YP_001842418.1| glutamine ABC transporter permease component [Lactobacillus reuteri JCM 1112] gi|227363850|ref|ZP_03847955.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus reuteri MM2-3] gi|227544432|ref|ZP_03974481.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus reuteri CF48-3A] gi|300908279|ref|ZP_07125744.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus reuteri SD2112] gi|325683060|ref|ZP_08162576.1| glutamine ABC superfamily ATP binding cassette transporter, permease protein [Lactobacillus reuteri MM4-1A] gi|68160714|gb|AAY86803.1| lr0524 [Lactobacillus reuteri] gi|148531759|gb|ABQ83758.1| amino acid ABC transporter membrane protein 1, PAAT family [Lactobacillus reuteri DSM 20016] gi|183225421|dbj|BAG25938.1| glutamine ABC transporter permease component [Lactobacillus reuteri JCM 1112] gi|227071077|gb|EEI09395.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus reuteri MM2-3] gi|227185595|gb|EEI65666.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus reuteri CF48-3A] gi|300894526|gb|EFK87883.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus reuteri SD2112] gi|324977410|gb|EGC14361.1| glutamine ABC superfamily ATP binding cassette transporter, permease protein [Lactobacillus reuteri MM4-1A] Length = 212 Score = 99.8 bits (247), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 56/124 (45%), Positives = 82/124 (66%), Gaps = 2/124 (1%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I L+ YT+AFIAE VR+G+ ++ GQME A+A GLT+ +A R ++LPQA R +IPPL +Q Sbjct: 90 IGLTLYTSAFIAETVRAGINSIDPGQMEGALANGLTYGQAMRYIVLPQAFRVVIPPLGNQ 149 Query: 331 YLNLLKNSS-LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 ++NL+KNSS LA GF DL+ G I N T + I +YL +++ ++ +M L Sbjct: 150 FINLVKNSSVLAFVAGF-DLMYQGNLIANDTLATMPTYFIVGIMYLIITLPLSYYMRHLE 208 Query: 390 AKIA 393 K+A Sbjct: 209 KKLA 212 Score = 41.6 bits (96), Expect = 0.23, Method: Compositional matrix adjust. Identities = 26/62 (41%), Positives = 36/62 (58%), Gaps = 2/62 (3%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI--F 146 +L G NT + +I + IIGT +S ++++ I VYVEVFRNIP LV+ F Sbjct: 12 LLTGLWNTILCSLIALIGSLIIGTFFALLEISQHRVLKIIGHVYVEVFRNIPLLVITMAF 71 Query: 147 FL 148 FL Sbjct: 72 FL 73 >gi|312866757|ref|ZP_07726971.1| putative arginine ABC transporter, permease protein ArtQ [Streptococcus parasanguinis F0405] gi|311097838|gb|EFQ56068.1| putative arginine ABC transporter, permease protein ArtQ [Streptococcus parasanguinis F0405] Length = 218 Score = 99.8 bits (247), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 60/209 (28%), Positives = 111/209 (53%), Gaps = 23/209 (11%) Query: 190 FVFSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243 F + V+G++ +F+ R + + +PL+ ++ F+ +G+P L+ +Q Sbjct: 26 FAIAMVIGVIFGMFSVSPYKWLRWTAEIFVDVIRGIPLMILAAFIFWGIPNLIESVTGHQ 85 Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 + +F+ G+ IALS AA+IAEIVR G+ AVP GQMEA+ +L Sbjct: 86 SPIN-------DFVAGT----------IALSLNAAAYIAEIVRGGIQAVPAGQMEASRSL 128 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363 G+++ K R ++LPQA + ++P +Q++ LK++++ A+G +L G II + Q+ Sbjct: 129 GISYGKTMRKIILPQATKLMLPNFVNQFVIALKDTTIVSAIGLVELFQTGKIIIARNYQS 188 Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392 ++ I YL + ++ F +L K+ Sbjct: 189 FKMYAILAVFYLVIITLLTRFAKKLEKKV 217 >gi|194466984|ref|ZP_03072971.1| polar amino acid ABC transporter, inner membrane subunit [Lactobacillus reuteri 100-23] gi|194454020|gb|EDX42917.1| polar amino acid ABC transporter, inner membrane subunit [Lactobacillus reuteri 100-23] Length = 212 Score = 99.8 bits (247), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 56/124 (45%), Positives = 82/124 (66%), Gaps = 2/124 (1%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I L+ YT+AFIAE VR+G+ ++ GQME A+A GLT+ +A R ++LPQA R +IPPL +Q Sbjct: 90 IGLTLYTSAFIAETVRAGINSIDPGQMEGALANGLTYGQAMRYIVLPQAFRVVIPPLGNQ 149 Query: 331 YLNLLKNSS-LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 ++NL+KNSS LA GF DL+ G I N T + I +YL +++ ++ +M L Sbjct: 150 FINLVKNSSVLAFVAGF-DLMYQGNLIANDTLATMPTYFIVGIMYLIITLPLSYYMRHLE 208 Query: 390 AKIA 393 K+A Sbjct: 209 KKLA 212 Score = 42.7 bits (99), Expect = 0.092, Method: Compositional matrix adjust. Identities = 27/62 (43%), Positives = 36/62 (58%), Gaps = 2/62 (3%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI--F 146 +L G NT + +I + IIGT +S +++V I VYVEVFRNIP LV+ F Sbjct: 12 LLTGLWNTILCSLIALIGSLIIGTFFALLEISQHRVVKIIGHVYVEVFRNIPLLVITMAF 71 Query: 147 FL 148 FL Sbjct: 72 FL 73 >gi|229074425|ref|ZP_04207457.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus Rock4-18] gi|228708709|gb|EEL60850.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus Rock4-18] Length = 218 Score = 99.8 bits (247), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 66/165 (40%), Positives = 104/165 (63%), Gaps = 17/165 (10%) Query: 235 LVLIALKYQLHFDKPVLG-QFN-FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292 LVLIA + +F PV+G N F+ G+ + L+ YTAAFIAE++R+G+++V Sbjct: 66 LVLIAFIF--YFALPVIGITLNGFVAGT----------VTLTVYTAAFIAEVIRAGILSV 113 Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352 +GQMEAA + GLT+ + ++LPQAM+ +IPPL +Q+LNL+KNSS+ + DL+ Sbjct: 114 AKGQMEAARSSGLTYVQGMYYIVLPQAMKIVIPPLGNQFLNLVKNSSILGIIAGTDLMYQ 173 Query: 353 GGTIINQTGQAIEI-ILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 G I +T ++ I + MF YL L+I +++ + L ++A KE Sbjct: 174 GDLISTKTFVTFDVYIFVGMF-YLILTIPLSMLVRYLEKRLA-KE 216 >gi|238927195|ref|ZP_04658955.1| polar amino acid ABC superfamily ATP binding cassette transporter, inner membrane subunit [Selenomonas flueggei ATCC 43531] gi|238884977|gb|EEQ48615.1| polar amino acid ABC superfamily ATP binding cassette transporter, inner membrane subunit [Selenomonas flueggei ATCC 43531] Length = 223 Score = 99.8 bits (247), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 73/222 (32%), Positives = 119/222 (53%), Gaps = 15/222 (6%) Query: 177 SFPTLTMDTNA--KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234 SFP L + +I V S +G V+ L ++R H + + L +Y+ F G P Sbjct: 15 SFPLLLVGAGVTIQITVLSTAIGFVIGLIVG-VARISHLRPLRMLAEVYVEFFR--GTPL 71 Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294 LV I L Y F PV I G + P F++ A + A++AEI R+G+ +V Sbjct: 72 LVQIFLFY---FALPV------ITGQRIDP-FIAAISACGINSGAYVAEIFRAGIQSVDE 121 Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354 GQMEA +LG+T + R +++PQA + +IPPL ++++ +LK+SSL +GF +L G Sbjct: 122 GQMEAGRSLGMTWLQTMRYIIVPQAFKRVIPPLGNEFIAMLKDSSLVSVIGFEELTRRGQ 181 Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 II +T + EI + IYL +++ I+ F+ L + + + Sbjct: 182 LIIAKTYGSFEIWMSVAVIYLVMTLTISRFVAYLERRCRVHD 223 Score = 36.2 bits (82), Expect = 8.3, Method: Compositional matrix adjust. Identities = 22/59 (37%), Positives = 31/59 (52%), Gaps = 4/59 (6%) Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPF 167 +IG +VG R+S + + + VYVE FR P LV IF Y + LP+ + PF Sbjct: 39 VIGLIVGVARISHLRPLRMLAEVYVEFFRGTPLLVQIFLFYFA----LPVITGQRIDPF 93 >gi|146310839|ref|YP_001175913.1| polar amino acid ABC transporter, inner membrane subunit [Enterobacter sp. 638] gi|145317715|gb|ABP59862.1| L-aspartate ABC transporter membrane protein / L-glutamate ABC transporter membrane protein [Enterobacter sp. 638] Length = 246 Score = 99.8 bits (247), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 52/129 (40%), Positives = 81/129 (62%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+S + L +TAA + E VRSG+ ++PRGQ AA+A+GLT +A R VLLP A R I+P Sbjct: 111 FVSSMLCLGLFTAARVCEQVRSGIQSLPRGQKNAALAMGLTLPQAYRYVLLPNAYRVIVP 170 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 P+TS+ +NL+KNS++A +G D+ + G +++ + A E Y+ ++ +I L M Sbjct: 171 PMTSEMMNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAWESFTAITLAYVLINTVIMLVM 230 Query: 386 NRLNAKIAL 394 N + K L Sbjct: 231 NLVERKTRL 239 Score = 43.1 bits (100), Expect = 0.069, Method: Compositional matrix adjust. Identities = 40/140 (28%), Positives = 66/140 (47%), Gaps = 20/140 (14%) Query: 82 DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141 +++Y + GF T L+ + I A ++G+L G R N+ ++ + +YVE+FRN+P Sbjct: 18 NTTYLGWLWSGFQVTVALSITAWIIAFLVGSLFGILRTVPNRFLSSLGTLYVELFRNVPL 77 Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201 +V F Y V +LP N G+ F + +D N + FV S + L Sbjct: 78 IVQFFTWYLVVPELLP--------------ENLGMWFKS-ELDPNIQFFVSSM---LCLG 119 Query: 202 LF-ATRLSRHFHEKTGKALP 220 LF A R+ ++LP Sbjct: 120 LFTAARVCEQVRSGI-QSLP 138 >gi|304437141|ref|ZP_07397102.1| ABC superfamily ATP binding cassette transporter, membrane protein [Selenomonas sp. oral taxon 149 str. 67H29BP] gi|304369803|gb|EFM23467.1| ABC superfamily ATP binding cassette transporter, membrane protein [Selenomonas sp. oral taxon 149 str. 67H29BP] Length = 223 Score = 99.8 bits (247), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 73/222 (32%), Positives = 119/222 (53%), Gaps = 15/222 (6%) Query: 177 SFPTLTMDTNA--KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234 SFP L + +I V S +G V+ L ++R H + + L +Y+ F G P Sbjct: 15 SFPLLLVGAGVTIQITVLSTAIGFVIGL-VVGVARISHLRPLRMLAEVYVEFFR--GTPL 71 Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294 LV I L Y F PV I G + P F++ A + A++AEI R+G+ +V Sbjct: 72 LVQIFLFY---FALPV------ITGQRIDP-FIAAISACGINSGAYVAEIFRAGIQSVDE 121 Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354 GQMEA +LG+T + R +++PQA + +IPPL ++++ +LK+SSL +GF +L G Sbjct: 122 GQMEAGRSLGMTWLQTMRYIIVPQAFKRVIPPLGNEFIAMLKDSSLVSVIGFEELTRRGQ 181 Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 II +T + EI + IYL +++ I+ F+ L + + + Sbjct: 182 LIIAKTYGSFEIWMSVAVIYLVMTLTISRFVAYLERRCRVHD 223 Score = 36.2 bits (82), Expect = 9.7, Method: Compositional matrix adjust. Identities = 22/59 (37%), Positives = 31/59 (52%), Gaps = 4/59 (6%) Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPF 167 +IG +VG R+S + + + VYVE FR P LV IF Y + LP+ + PF Sbjct: 39 VIGLVVGVARISHLRPLRMLAEVYVEFFRGTPLLVQIFLFYFA----LPVITGQRIDPF 93 >gi|257869446|ref|ZP_05649099.1| amino acid ABC transporter [Enterococcus gallinarum EG2] gi|257803610|gb|EEV32432.1| amino acid ABC transporter [Enterococcus gallinarum EG2] Length = 215 Score = 99.8 bits (247), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 48/126 (38%), Positives = 82/126 (65%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I L+ YT+AFIAE +RSG+ VP+GQMEA+++ G T+ +A R ++LPQA + ++PPL +Q Sbjct: 90 IGLTIYTSAFIAETIRSGIQTVPKGQMEASLSSGFTYSQAMRYIILPQAFKIVVPPLGNQ 149 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++NL+KNSS+ V D++ G I ++T + +I YL +++ ++ M L Sbjct: 150 FINLVKNSSILAMVAGLDIMYQGDLIASETFNTFDTYIIVGIFYLIITLPLSYLMVYLER 209 Query: 391 KIALKE 396 + A++ Sbjct: 210 RWAVRS 215 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 24/67 (35%), Positives = 37/67 (55%) Query: 83 SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142 +Y GF T + + + + +IGTL+ +LS N+ V I + YVE FRNIP L Sbjct: 6 QTYGDQFFSGFKYTIFSSLLALFFSLVIGTLMAIFQLSTNRWVKGIAKAYVEFFRNIPLL 65 Query: 143 VVIFFLY 149 +++ F Y Sbjct: 66 IIVMFFY 72 >gi|323697542|ref|ZP_08109454.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio sp. ND132] gi|323457474|gb|EGB13339.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio desulfuricans ND132] Length = 238 Score = 99.4 bits (246), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 66/207 (31%), Positives = 117/207 (56%), Gaps = 18/207 (8%) Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252 +F LG+ L R+SR + K + YI +I G+P L+LI + ++ PV+ Sbjct: 47 AFWLGLAAGLM--RMSRRWWIKIPA---VCYIE--VIRGMPLLLLI---FWFYYLAPVIT 96 Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312 N P F + + +T A++ EIVR+G+ A+P+GQMEAA + GL+H +A + Sbjct: 97 GQNL-------PAFSTTMVCFMIFTGAYVGEIVRAGVKALPKGQMEAARSTGLSHVQAMQ 149 Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN-QTGQAIEIILIWM 371 LV+LPQA+R++IP +Q+++L K++SLA +G +L G + N +T + EI + Sbjct: 150 LVILPQALRNMIPSFVNQFVSLTKDTSLAAILGVIELTRTGIQVDNRETVASFEIWITIA 209 Query: 372 FIYLSLSIMIALFMNRLNAKIALKEKK 398 +Y + ++ + RL A+++ + + Sbjct: 210 CLYFLICYILTSYSRRLEAQLSRYQAR 236 >gi|152997696|ref|YP_001342531.1| polar amino acid ABC transporter inner membrane subunit [Marinomonas sp. MWYL1] gi|150838620|gb|ABR72596.1| polar amino acid ABC transporter, inner membrane subunit [Marinomonas sp. MWYL1] Length = 315 Score = 99.4 bits (246), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 70/209 (33%), Positives = 110/209 (52%), Gaps = 15/209 (7%) Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247 ++ V S V +V+ LFA L+R + L + YI LI G P LV I + Y Sbjct: 122 QLSVVSLVFAVVIGLFAG-LARISTNPALRYLSVTYIE--LIRGTPLLVQIFIFY----- 173 Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307 FIG F + ALS +T A+IAEIVRSG+ ++ GQMEAA +LG+ + Sbjct: 174 -------FFIGTVLDLDRFTAGVAALSVFTGAYIAEIVRSGIQSISPGQMEAARSLGMNY 226 Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367 +A V+LPQA + +PP+ Q++NL+K+SSL + DL G +++ T E+ Sbjct: 227 VQAMVNVILPQAFKRTLPPMAGQFINLIKDSSLVSVISITDLTKAGREVVSSTFAPFEVW 286 Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIALKE 396 +YL L+ ++ + RL +++ + Sbjct: 287 FAVALMYLVLTGGLSWAIQRLEKRLSASD 315 Score = 37.4 bits (85), Expect = 4.1, Method: Compositional matrix adjust. Identities = 22/67 (32%), Positives = 35/67 (52%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151 G V T L+ ++ A +IG G R+S N + ++ Y+E+ R P LV IF Y Sbjct: 116 GLVMTLQLSVVSLVFAVVIGLFAGLARISTNPALRYLSVTYIELIRGTPLLVQIFIFYFF 175 Query: 152 VLSVLPI 158 + +VL + Sbjct: 176 IGTVLDL 182 >gi|154249738|ref|YP_001410563.1| polar amino acid ABC transporter, inner membrane subunit [Fervidobacterium nodosum Rt17-B1] gi|154153674|gb|ABS60906.1| polar amino acid ABC transporter, inner membrane subunit [Fervidobacterium nodosum Rt17-B1] Length = 216 Score = 99.4 bits (246), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 61/163 (37%), Positives = 99/163 (60%), Gaps = 11/163 (6%) Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290 G P LV I++ Y F P LG ++P + + AL + A+IAEIVR+G+ Sbjct: 63 GTPLLVQISIVY---FGLPQLG-------IQLAP-YPAAITALGLNSGAYIAEIVRAGIQ 111 Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 ++P+GQ EAA +LGLTH +A R V+LPQA R+I+P L ++++ L K+SSLA +G ++L+ Sbjct: 112 SIPKGQYEAARSLGLTHWQAMRYVILPQAFRNILPALGNEFITLTKDSSLASVIGVSELM 171 Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393 G +I++T Q I FIY ++ +I+ + + ++A Sbjct: 172 RSGQFVISRTFQTFSIYFGIAFIYFIMTFVISRLVRYIERRMA 214 Score = 40.8 bits (94), Expect = 0.33, Method: Compositional matrix adjust. Identities = 20/41 (48%), Positives = 25/41 (60%) Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 I+GT +G GRLS KL+ + C YVE R P LV I +Y Sbjct: 34 ILGTFIGMGRLSKIKLINYPCTAYVEFLRGTPLLVQISIVY 74 >gi|30018826|ref|NP_830457.1| glutamine transport system permease protein glnP [Bacillus cereus ATCC 14579] gi|229126072|ref|ZP_04255094.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus BDRD-Cer4] gi|29894368|gb|AAP07658.1| Glutamine transport system permease protein glnP [Bacillus cereus ATCC 14579] gi|228657394|gb|EEL13210.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus BDRD-Cer4] Length = 218 Score = 99.4 bits (246), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 66/165 (40%), Positives = 105/165 (63%), Gaps = 17/165 (10%) Query: 235 LVLIALKYQLHFDKPVLG-QFN-FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292 LVLIA + +F PV+G N F+ G+ + L+ YTA FIAE++R+G+++V Sbjct: 66 LVLIAFIF--YFALPVIGITLNGFVAGT----------VTLTVYTATFIAEVIRAGILSV 113 Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352 +GQMEAA + GLT+ +A V+LPQA++ ++PPL +Q+LNL+KNSS+ + ADL+ Sbjct: 114 AKGQMEAARSSGLTYVQAMYYVVLPQAVKIVVPPLGNQFLNLVKNSSILGIIAGADLMYQ 173 Query: 353 GGTIINQTGQAIEI-ILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 G I +T ++ I + MF YL L+I +++ + L ++A KE Sbjct: 174 GDLISTKTFVTFDVYIFVGMF-YLILTIPLSMLVRYLEKRLA-KE 216 >gi|171779932|ref|ZP_02920836.1| hypothetical protein STRINF_01719 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] gi|171281280|gb|EDT46715.1| hypothetical protein STRINF_01719 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] Length = 743 Score = 99.4 bits (246), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 60/209 (28%), Positives = 111/209 (53%), Gaps = 23/209 (11%) Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPTLVLIALKYQ 243 F + V+GI+ + A ++ + + +PL+ ++ F+ +G+P L+ +Q Sbjct: 551 FAIAMVIGIIFGMMAVAPNKVLRTISAVFVDVVRGIPLMIVAAFIFWGIPNLIESMTGHQ 610 Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 P+ +F++ IALS A+IAEIVR G+ AVP+GQMEA+ +L Sbjct: 611 ----SPI-------------NDFLAATIALSLNAGAYIAEIVRGGIEAVPKGQMEASRSL 653 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363 G+++ K + V+LPQA+R ++P +Q++ LK++++ A+G +L G II + Q+ Sbjct: 654 GISYGKTMKKVILPQAVRVMLPNFINQFVISLKDTTIVSAIGLVELFQTGKIIIARNYQS 713 Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392 + I IYL + ++ RL ++ Sbjct: 714 FRMYAILAIIYLVIITLLTRLAKRLEKRL 742 >gi|161507108|ref|YP_001577062.1| glutamine ABC transporter permease [Lactobacillus helveticus DPC 4571] gi|160348097|gb|ABX26771.1| Glutamine ABC transporter permease [Lactobacillus helveticus DPC 4571] Length = 213 Score = 99.4 bits (246), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 72/204 (35%), Positives = 115/204 (56%), Gaps = 20/204 (9%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 +FS +LG+ +L K GK + +YI+ F +P LV++ + Y L + + Sbjct: 28 IFSLILGVFFALLEVA-----PTKFGKIVAKVYIAIFR--NIPLLVIVMIFY-LIVPRYI 79 Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 + F G+ I L+ YT+AFIAE VR+G+ ++ GQME A + G+T+ +A Sbjct: 80 VKLSGFQAGT----------IGLTLYTSAFIAETVRAGISSIGTGQMEGARSNGMTYTQA 129 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSS-LAVAVGFADLVSVGGTIINQTGQAIEIILI 369 R V+LPQAM+ +IPPL +Q++NL+KNSS LA GF DL+ I T + I+ ++ Sbjct: 130 MRYVILPQAMKIVIPPLGNQFVNLVKNSSVLAFVAGF-DLMYQAQLIAFSTFRTIDTYVV 188 Query: 370 WMFIYLSLSIMIALFMNRLNAKIA 393 YL L++ ++ +M L K+A Sbjct: 189 VGLFYLILTLPLSYYMRHLEKKLA 212 Score = 36.2 bits (82), Expect = 9.5, Method: Compositional matrix adjust. Identities = 19/62 (30%), Positives = 32/62 (51%) Query: 88 AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147 + L GF NT + +I + I+G ++ K + +VY+ +FRNIP LV++ Sbjct: 11 SFLTGFWNTILCSIIALIFSLILGVFFALLEVAPTKFGKIVAKVYIAIFRNIPLLVIVMI 70 Query: 148 LY 149 Y Sbjct: 71 FY 72 >gi|229042503|ref|ZP_04190248.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus AH676] gi|296501401|ref|YP_003663101.1| glutamine transport system permease GlnP [Bacillus thuringiensis BMB171] gi|228726856|gb|EEL78068.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus AH676] gi|296322453|gb|ADH05381.1| glutamine transport system permease protein glnP [Bacillus thuringiensis BMB171] Length = 218 Score = 99.4 bits (246), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 66/165 (40%), Positives = 104/165 (63%), Gaps = 17/165 (10%) Query: 235 LVLIALKYQLHFDKPVLG-QFN-FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292 LVLIA + +F PV+G N F+ G+ + L+ YTAAFIAE++R+G+++V Sbjct: 66 LVLIAFIF--YFALPVIGITLNGFVAGT----------VTLTVYTAAFIAEVIRAGILSV 113 Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352 +GQMEAA + GLT+ + ++LPQAM+ +IPPL +Q+LNL+KNSS+ + DL+ Sbjct: 114 AKGQMEAARSSGLTYVQGMYYIVLPQAMKIVIPPLGNQFLNLVKNSSILGIIAGMDLMYQ 173 Query: 353 GGTIINQTGQAIEI-ILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 G I +T ++ I + MF YL L+I +++ + L ++A KE Sbjct: 174 GDLISTKTFVTFDVYIFVGMF-YLILTIPLSMLVRYLEKRLA-KE 216 >gi|257866173|ref|ZP_05645826.1| amino acid ABC transporter [Enterococcus casseliflavus EC30] gi|257872504|ref|ZP_05652157.1| amino acid ABC transporter [Enterococcus casseliflavus EC10] gi|257875808|ref|ZP_05655461.1| amino acid ABC transporter [Enterococcus casseliflavus EC20] gi|325570408|ref|ZP_08146185.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus casseliflavus ATCC 12755] gi|257800107|gb|EEV29159.1| amino acid ABC transporter [Enterococcus casseliflavus EC30] gi|257806668|gb|EEV35490.1| amino acid ABC transporter [Enterococcus casseliflavus EC10] gi|257809974|gb|EEV38794.1| amino acid ABC transporter [Enterococcus casseliflavus EC20] gi|325156618|gb|EGC68795.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus casseliflavus ATCC 12755] Length = 215 Score = 99.4 bits (246), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 48/126 (38%), Positives = 82/126 (65%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I L+ YT+AFIAE +RSG+ VP+GQMEA+++ G T+ +A R ++LPQA + ++PPL +Q Sbjct: 90 IGLTIYTSAFIAETIRSGIQTVPKGQMEASLSSGFTYSQAMRYIILPQAFKIVVPPLGNQ 149 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++NL+KNSS+ V D++ G I ++T + +I YL +++ ++ M L Sbjct: 150 FINLVKNSSILAMVAGLDIMYQGDLIASETFNTFDTYIIVGLFYLIITLPLSYLMVYLER 209 Query: 391 KIALKE 396 + A++ Sbjct: 210 RWAVRS 215 Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust. Identities = 24/67 (35%), Positives = 38/67 (56%) Query: 83 SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142 +Y + GF T + + + +IGTL+ +LS N+L+ I + YVE FRNIP L Sbjct: 6 QTYTGQFIEGFKYTVMASLIALFFSLLIGTLMAIFQLSDNRLIKGIAKAYVEFFRNIPLL 65 Query: 143 VVIFFLY 149 +++ F Y Sbjct: 66 IIVMFFY 72 >gi|123444360|ref|YP_001008325.1| ABC transporter permease [Yersinia enterocolitica subsp. enterocolitica 8081] gi|122091321|emb|CAL14207.1| ABC transporter permease [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 245 Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 48/96 (50%), Positives = 69/96 (71%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 EF++ +I L+CY+ AFIAE +RSG+ V +GQ AA ALGLT +A R V+LPQA++ + Sbjct: 113 EFLAGFIGLTCYSTAFIAEELRSGISGVAKGQKYAAHALGLTGWQAMRHVVLPQALKIAM 172 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 PPL QY+N++KNSSLA+A+G A+L + +T Sbjct: 173 PPLLGQYMNIIKNSSLAMAIGVAELSYASRQVETET 208 Score = 44.7 bits (104), Expect = 0.023, Method: Compositional matrix adjust. Identities = 23/66 (34%), Positives = 37/66 (56%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151 GF+ T W++ ++ +T++G L+ A R S K + W Y +FRN P L+ +FF Y + Sbjct: 22 GFLLTLWISACTVVASTLLGFLLAAARDSELKGLQWFSIGYSTLFRNTPLLIQLFFWYFA 81 Query: 152 VLSVLP 157 LP Sbjct: 82 ASQFLP 87 >gi|313123230|ref|YP_004033489.1| glutamine ABC transporter, permease protein [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|312279793|gb|ADQ60512.1| Glutamine ABC transporter, permease protein [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|325684594|gb|EGD26753.1| glutamine ABC superfamily ATP binding cassette transporter, permease protein [Lactobacillus delbrueckii subsp. lactis DSM 20072] Length = 213 Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 56/122 (45%), Positives = 81/122 (66%), Gaps = 2/122 (1%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I LS Y++AFIAE VRSG+ +V GQME A + G+T+ +A R V+LPQA R +IPPL +Q Sbjct: 91 IGLSIYSSAFIAETVRSGIQSVGTGQMEGARSNGMTYWQAMRYVILPQAFRIVIPPLGNQ 150 Query: 331 YLNLLKNSS-LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 ++NL+KNSS LA GF DL+ G + + T Q I ++ YL+L++ ++ +M L Sbjct: 151 FVNLIKNSSILAFVAGF-DLMYQGDIVASNTFQTIPSYVLVSLFYLALTLPLSYYMQYLE 209 Query: 390 AK 391 K Sbjct: 210 KK 211 Score = 37.4 bits (85), Expect = 3.7, Method: Compositional matrix adjust. Identities = 23/63 (36%), Positives = 32/63 (50%) Query: 87 TAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIF 146 + L+GF NT + + + IIG+ NK + +VYVE+FRNIP LVV Sbjct: 10 STFLLGFWNTILCSLISLFFSLIIGSGFAILETVPNKFWRAVAKVYVEIFRNIPLLVVTM 69 Query: 147 FLY 149 Y Sbjct: 70 VFY 72 >gi|15597399|ref|NP_250893.1| amino acid permease [Pseudomonas aeruginosa PAO1] gi|107101630|ref|ZP_01365548.1| hypothetical protein PaerPA_01002674 [Pseudomonas aeruginosa PACS2] gi|116050136|ref|YP_791047.1| putative amino acid permease [Pseudomonas aeruginosa UCBPP-PA14] gi|218891844|ref|YP_002440711.1| putative amino acid permease [Pseudomonas aeruginosa LESB58] gi|254235229|ref|ZP_04928552.1| hypothetical protein PACG_01120 [Pseudomonas aeruginosa C3719] gi|254240625|ref|ZP_04933947.1| hypothetical protein PA2G_01284 [Pseudomonas aeruginosa 2192] gi|313110963|ref|ZP_07796803.1| putative amino acid permease [Pseudomonas aeruginosa 39016] gi|9948225|gb|AAG05591.1|AE004646_12 probable amino acid permease [Pseudomonas aeruginosa PAO1] gi|115585357|gb|ABJ11372.1| putative amino acid permease [Pseudomonas aeruginosa UCBPP-PA14] gi|126167160|gb|EAZ52671.1| hypothetical protein PACG_01120 [Pseudomonas aeruginosa C3719] gi|126194003|gb|EAZ58066.1| hypothetical protein PA2G_01284 [Pseudomonas aeruginosa 2192] gi|218772070|emb|CAW27849.1| probable amino acid permease [Pseudomonas aeruginosa LESB58] gi|310883305|gb|EFQ41899.1| putative amino acid permease [Pseudomonas aeruginosa 39016] Length = 238 Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 64/172 (37%), Positives = 96/172 (55%), Gaps = 10/172 (5%) Query: 220 PLLYISTFLIFGLPTLVLIALKYQLH--FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT 277 PLL F FG+P L+ AL L+ + P+L +F EF++ L+ YT Sbjct: 65 PLLVQLFFWYFGVPALLPEALVSWLNTPHETPLLDWPSF--------EFLAGAWGLTLYT 116 Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 +AF+AE R+G+ +V Q A +ALGLT R+ R+V+LPQA+R+ +PPL QY+N LKN Sbjct: 117 SAFVAEEFRAGIASVRPEQRAAGLALGLTQRQVWRVVVLPQALRTALPPLLGQYMNALKN 176 Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 SSLA+A+G A+L + +T + + I +Y+ +I F L Sbjct: 177 SSLAMAIGLAELSYASRQVETETFKTFQAFGIATLLYIGAIALIEAFGQALQ 228 Score = 45.1 bits (105), Expect = 0.019, Method: Compositional matrix adjust. Identities = 21/48 (43%), Positives = 30/48 (62%) Query: 110 IGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLP 157 IG + RLS +L++W R Y+ +FRN P LV +FF Y V ++LP Sbjct: 35 IGAPLAIARLSRRRLLSWPARAYLALFRNTPLLVQLFFWYFGVPALLP 82 >gi|318608045|emb|CBY29543.1| amino acid ABC transporter, permease protein [Yersinia enterocolitica subsp. palearctica Y11] Length = 245 Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 48/96 (50%), Positives = 69/96 (71%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 EF++ +I L+CY+ AFIAE +RSG+ V +GQ AA ALGLT +A R V+LPQA++ + Sbjct: 113 EFLAGFIGLTCYSTAFIAEELRSGISGVAKGQKYAAHALGLTGWQAMRHVVLPQALKIAM 172 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 PPL QY+N++KNSSLA+A+G A+L + +T Sbjct: 173 PPLLGQYMNIIKNSSLAMAIGVAELSYASRQVETET 208 Score = 45.1 bits (105), Expect = 0.021, Method: Compositional matrix adjust. Identities = 23/66 (34%), Positives = 37/66 (56%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151 GF+ T W++ ++ +T++G L+ A R S K + W Y +FRN P L+ +FF Y + Sbjct: 22 GFLLTLWISACTVVASTLLGFLLAAARDSELKGLQWFAIGYSTLFRNTPLLIQLFFWYFA 81 Query: 152 VLSVLP 157 LP Sbjct: 82 ASQFLP 87 >gi|94309636|ref|YP_582846.1| amino acid ABC transporter permease [Cupriavidus metallidurans CH34] gi|93353488|gb|ABF07577.1| glutamate and aspartate transporter subunit ; membrane component of ABC superfamily [Cupriavidus metallidurans CH34] Length = 231 Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 62/168 (36%), Positives = 97/168 (57%), Gaps = 15/168 (8%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 + +PLL F FG P L+ A+K L+ + N+ E +S IAL Y Sbjct: 66 RNVPLLAHMLFWYFGAPQLLPFAIKSWLY-------EHNY--------EAVSALIALVLY 110 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 T A++AE +RSG+ ++P+ Q+EA+ ALG + + RLV+LPQ++R +PPL +Q LNL K Sbjct: 111 TTAYMAEDIRSGIRSIPKEQLEASRALGFSFLASMRLVVLPQSLRITVPPLVNQILNLWK 170 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 NSS+A+ +G A+L+ + + T + E YL++S+ I LF Sbjct: 171 NSSIAMVIGVAELMYQAQQVESATFRGFESFAFATLAYLTISMTITLF 218 >gi|260893885|ref|YP_003239982.1| polar amino acid ABC transporter, inner membrane subunit [Ammonifex degensii KC4] gi|260866026|gb|ACX53132.1| polar amino acid ABC transporter, inner membrane subunit [Ammonifex degensii KC4] Length = 233 Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 49/122 (40%), Positives = 82/122 (67%) Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333 S + A++AEI R+G+ ++P+GQMEAA +LG+T+R+A R V+LPQA R+IIPPL ++++ Sbjct: 111 SLNSGAYVAEIFRAGIQSIPKGQMEAARSLGMTYRQAMRYVILPQAFRNIIPPLGNEFIA 170 Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393 +LK++SL +G +L G II T + EI L IYL L++ I+ ++ ++ Sbjct: 171 MLKDTSLLSVIGIVELTRRGQIIIASTFRPFEIWLTVALIYLILTLSISRLVDYWEKRLR 230 Query: 394 LK 395 ++ Sbjct: 231 VR 232 Score = 39.7 bits (91), Expect = 0.83, Method: Compositional matrix adjust. Identities = 24/81 (29%), Positives = 43/81 (53%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L+G V T + + + G +VG GRLS N+++ ++ YV+ R P LV IF + Sbjct: 11 LLLGAVETLKITCLAVSLGCVFGLIVGLGRLSRNRVIRFLSTCYVDFLRGTPLLVQIFIV 70 Query: 149 YKSVLSVLPIPDHSIVLPFGM 169 Y + +L + +V +G+ Sbjct: 71 YFGLPQLLEQLQNFLVESWGL 91 >gi|332163539|ref|YP_004300116.1| ABC transporter permease [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|325667769|gb|ADZ44413.1| ABC transporter permease [Yersinia enterocolitica subsp. palearctica 105.5R(r)] Length = 245 Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 48/96 (50%), Positives = 69/96 (71%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 EF++ +I L+CY+ AFIAE +RSG+ V +GQ AA ALGLT +A R V+LPQA++ + Sbjct: 113 EFLAGFIGLTCYSTAFIAEELRSGISGVAKGQKYAAHALGLTGWQAMRHVVLPQALKIAM 172 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 PPL QY+N++KNSSLA+A+G A+L + +T Sbjct: 173 PPLLGQYMNIIKNSSLAMAIGVAELSYASRQVETET 208 Score = 45.1 bits (105), Expect = 0.021, Method: Compositional matrix adjust. Identities = 23/66 (34%), Positives = 37/66 (56%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151 GF+ T W++ ++ +T++G L+ A R S K + W Y +FRN P L+ +FF Y + Sbjct: 22 GFLLTLWISACTVVASTLLGFLLAAARDSELKGLQWFAIGYSTLFRNTPLLIQLFFWYFA 81 Query: 152 VLSVLP 157 LP Sbjct: 82 ASQFLP 87 >gi|49082028|gb|AAT50414.1| PA2203 [synthetic construct] Length = 239 Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 64/172 (37%), Positives = 96/172 (55%), Gaps = 10/172 (5%) Query: 220 PLLYISTFLIFGLPTLVLIALKYQLH--FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT 277 PLL F FG+P L+ AL L+ + P+L +F EF++ L+ YT Sbjct: 65 PLLVQLFFWYFGVPALLPEALVSWLNTPHETPLLDWPSF--------EFLAGAWGLTLYT 116 Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 +AF+AE R+G+ +V Q A +ALGLT R+ R+V+LPQA+R+ +PPL QY+N LKN Sbjct: 117 SAFVAEEFRAGIASVRPEQRAAGLALGLTQRQVWRVVVLPQALRTALPPLLGQYMNALKN 176 Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 SSLA+A+G A+L + +T + + I +Y+ +I F L Sbjct: 177 SSLAMAIGLAELSYASRQVETETFKTFQAFGIATLLYIGAIALIEAFGQALQ 228 Score = 45.1 bits (105), Expect = 0.019, Method: Compositional matrix adjust. Identities = 21/48 (43%), Positives = 30/48 (62%) Query: 110 IGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLP 157 IG + RLS +L++W R Y+ +FRN P LV +FF Y V ++LP Sbjct: 35 IGAPLAIARLSRRRLLSWPARAYLALFRNTPLLVQLFFWYFGVPALLP 82 >gi|46579380|ref|YP_010188.1| His/Glu/Gln/Arg/opine ABC transporter permease [Desulfovibrio vulgaris str. Hildenborough] gi|120603064|ref|YP_967464.1| polar amino acid ABC transporter inner membrane protein [Desulfovibrio vulgaris DP4] gi|46448794|gb|AAS95447.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Desulfovibrio vulgaris str. Hildenborough] gi|120563293|gb|ABM29037.1| amino acid ABC transporter membrane protein, PAAT family [Desulfovibrio vulgaris DP4] gi|311233203|gb|ADP86057.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio vulgaris RCH1] Length = 337 Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 68/209 (32%), Positives = 120/209 (57%), Gaps = 15/209 (7%) Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247 ++ + + ++GIVL + T L+R + L + YI +I G P LV + L Y Sbjct: 136 EVSMLAIIIGIVLGV-VTGLARISVNPALRWLAITYIE--IIRGSPLLVQVFLWYF---- 188 Query: 248 KPVLGQ-----FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302 V+G F +G S + P + + +AL+ +T A++AEIVR+G+ +V RGQMEAA + Sbjct: 189 --VVGTLLNALFEKVGLSAIPPLWYGV-MALAIFTGAYVAEIVRAGIQSVHRGQMEAARS 245 Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362 LG+++ ++ R V+LPQA R I+PPL Q+++L+K+SSL + +L ++ + Q Sbjct: 246 LGMSYAQSMRKVILPQAFRRIMPPLAGQFISLVKDSSLLGVIAVRELTKATREVVTTSLQ 305 Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAK 391 E+ ++ +YL L+ ++L + L + Sbjct: 306 PFELWIVCALLYLVLTFTLSLCVQYLERR 334 >gi|323467039|gb|ADX70726.1| Glutamine ABC superfamily ATP binding cassette transporter, permease protein [Lactobacillus helveticus H10] Length = 213 Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 72/204 (35%), Positives = 115/204 (56%), Gaps = 20/204 (9%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 +FS +LG+ +L K GK + +YI+ F +P LV++ + Y L + + Sbjct: 28 IFSLILGVFFALLEVA-----PTKFGKIVAKVYIAIFR--NIPLLVIVMIFY-LIVPRYI 79 Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 + F G+ I L+ YT+AFIAE VR+G+ ++ GQME A + G+T+ +A Sbjct: 80 VKLSGFQAGT----------IGLTLYTSAFIAETVRAGINSIGTGQMEGARSNGMTYTQA 129 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSS-LAVAVGFADLVSVGGTIINQTGQAIEIILI 369 R V+LPQAM+ +IPPL +Q++NL+KNSS LA GF DL+ I T + I+ ++ Sbjct: 130 MRYVILPQAMKIVIPPLGNQFVNLVKNSSVLAFVAGF-DLMYQAQLIAFSTFRTIDTYVV 188 Query: 370 WMFIYLSLSIMIALFMNRLNAKIA 393 YL L++ ++ +M L K+A Sbjct: 189 VGLFYLILTLPLSYYMRHLEKKLA 212 Score = 36.2 bits (82), Expect = 9.9, Method: Compositional matrix adjust. Identities = 19/62 (30%), Positives = 32/62 (51%) Query: 88 AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147 + L GF NT + +I + I+G ++ K + +VY+ +FRNIP LV++ Sbjct: 11 SFLTGFWNTILCSIIALIFSLILGVFFALLEVAPTKFGKIVAKVYIAIFRNIPLLVIVMI 70 Query: 148 LY 149 Y Sbjct: 71 FY 72 >gi|56420513|ref|YP_147831.1| glutamine ABC transporter permease [Geobacillus kaustophilus HTA426] gi|261420186|ref|YP_003253868.1| polar amino acid ABC transporter inner membrane subunit [Geobacillus sp. Y412MC61] gi|297529845|ref|YP_003671120.1| polar amino acid ABC transporter inner membrane protein [Geobacillus sp. C56-T3] gi|319766998|ref|YP_004132499.1| polar amino acid ABC transporter inner membrane protein [Geobacillus sp. Y412MC52] gi|56380355|dbj|BAD76263.1| glutamine ABC transporter (permease) [Geobacillus kaustophilus HTA426] gi|261376643|gb|ACX79386.1| polar amino acid ABC transporter, inner membrane subunit [Geobacillus sp. Y412MC61] gi|297253097|gb|ADI26543.1| polar amino acid ABC transporter, inner membrane subunit [Geobacillus sp. C56-T3] gi|317111864|gb|ADU94356.1| polar amino acid ABC transporter, inner membrane subunit [Geobacillus sp. Y412MC52] Length = 217 Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 54/128 (42%), Positives = 84/128 (65%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 F + + L YTAAFIAE +RSG+ AVP+GQMEAA + GLT+ +A R V+LPQA++ +I Sbjct: 86 SFTAGTLGLMVYTAAFIAEAIRSGIQAVPKGQMEAARSSGLTYLQAMRYVILPQAVKIVI 145 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 PPL +Q++NL+KNSS+ + DL+ G I ++T ++ + YL L+I ++L Sbjct: 146 PPLGNQFINLVKNSSVLGVIAGLDLMYYGDLISSKTFVTFDVYIFVALFYLVLTIPLSLG 205 Query: 385 MNRLNAKI 392 + L ++ Sbjct: 206 VGYLERRL 213 >gi|317491136|ref|ZP_07949572.1| inner membrane binding protein [Enterobacteriaceae bacterium 9_2_54FAA] gi|316920683|gb|EFV42006.1| inner membrane binding protein [Enterobacteriaceae bacterium 9_2_54FAA] Length = 246 Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 51/129 (39%), Positives = 81/129 (62%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+S + L +TAA + E VRSG+ ++PRGQ A +A+GLT + R VLLP A R I+P Sbjct: 111 FVSSMLCLGLFTAARVCEQVRSGIQSLPRGQKNAGLAMGLTLPQTYRYVLLPNAYRVIVP 170 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 P+TS+ LNL+KNS++A +G D+ + G +++ + A E Y++++ +I L M Sbjct: 171 PMTSEMLNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAYESFTAITLAYIAINAVIMLVM 230 Query: 386 NRLNAKIAL 394 + + KI L Sbjct: 231 HFVERKIQL 239 Score = 41.2 bits (95), Expect = 0.26, Method: Compositional matrix adjust. Identities = 37/131 (28%), Positives = 58/131 (44%), Gaps = 19/131 (14%) Query: 81 SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140 +++Y I GF T L+ I A +G++ G R N+ ++ I YVE+FRN+P Sbjct: 17 GNTTYLGWIWSGFQVTVALSICAWIIAFFVGSIFGILRTVPNRFLSTIGMCYVELFRNVP 76 Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200 +V F Y + +LP GM+ + +D N + FV S + L Sbjct: 77 LIVQFFTWYLVIPELLPA-------DLGMWFKSE--------LDPNVQFFVSSM---LCL 118 Query: 201 SLF-ATRLSRH 210 LF A R+ Sbjct: 119 GLFTAARVCEQ 129 >gi|294497133|ref|YP_003560833.1| glutamine ABC transporter permease GlnM [Bacillus megaterium QM B1551] gi|294347070|gb|ADE67399.1| glutamine ABC transporter, permease protein GlnM [Bacillus megaterium QM B1551] Length = 212 Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 55/129 (42%), Positives = 86/129 (66%), Gaps = 12/129 (9%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + L+ YTAAFIAE +R+G++AVP+GQ+EAA + GLT+ +A R ++LPQA++ +IPPL +Q Sbjct: 87 LGLTIYTAAFIAEAIRAGIMAVPKGQLEAARSSGLTYGQAMRFIILPQAIKIVIPPLGNQ 146 Query: 331 YLNLLKNSS-LAVAVGF-----ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 ++NL+KNSS L + GF ADLVS +QT ++ + YL L+I ++L Sbjct: 147 FINLVKNSSVLGIVAGFDLMYQADLVS------SQTYVVFDVYIFVALFYLVLTIPLSLG 200 Query: 385 MNRLNAKIA 393 + L ++ Sbjct: 201 VGYLEKRLG 209 >gi|270292808|ref|ZP_06199019.1| glutamine ABC transporter, glutamine-binding protein/permease protein [Streptococcus sp. M143] gi|270278787|gb|EFA24633.1| glutamine ABC transporter, glutamine-binding protein/permease protein [Streptococcus sp. M143] Length = 482 Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 63/209 (30%), Positives = 112/209 (53%), Gaps = 23/209 (11%) Query: 190 FVFSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243 F + V+GI+ +F+ RL + +PL+ ++ F+ +G+P Sbjct: 290 FAIAIVIGIIFGMFSVSPYKSLRLISEIFVDVIRGIPLMILAAFIFWGIP---------- 339 Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 +F + + GQ + I +F++ IALS AA+IAEIVR G+ AVP GQMEA+ +L Sbjct: 340 -NFIESITGQQSPIN------DFVAGTIALSLNAAAYIAEIVRGGIQAVPVGQMEASRSL 392 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363 G+++ K R ++LPQA + ++P +Q++ LK++++ A+G +L G II + Q+ Sbjct: 393 GISYGKTMRKIILPQATKLMLPNFVNQFVIALKDTTIVSAIGLVELFQTGKIIIARNYQS 452 Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392 ++ I YL + ++ RL +I Sbjct: 453 FKMYAILAIFYLVIITLLTRLAKRLEKRI 481 >gi|309800525|ref|ZP_07694677.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus infantis SK1302] gi|308115873|gb|EFO53397.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus infantis SK1302] Length = 313 Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 63/209 (30%), Positives = 113/209 (54%), Gaps = 23/209 (11%) Query: 190 FVFSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243 F + V+GI+ +F+ RL + +PL+ ++ F+ +G+P Sbjct: 121 FAIAIVIGIIFGMFSVSPYKSLRLISEIFVDVIRGIPLMILAAFIFWGVP---------- 170 Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 +F + + GQ + I +F++ IALS +AA+IAEIVR G+ AVP GQMEA+ +L Sbjct: 171 -NFIESLTGQQSPIN------DFVAGTIALSLNSAAYIAEIVRGGIKAVPIGQMEASRSL 223 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363 G+++ K R ++LPQA + ++P +Q++ LK++++ A+G +L G II + Q+ Sbjct: 224 GISYSKTMRKIVLPQATKLMLPNFVNQFVIALKDTTIVSAIGLVELFQTGKIIIARNYQS 283 Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392 ++ I YL + ++ RL +I Sbjct: 284 FKMYAILAVFYLVIITLLTRLAKRLEKRI 312 >gi|331005159|ref|ZP_08328559.1| polar amino acid ABC transporter, inner membrane subunit [gamma proteobacterium IMCC1989] gi|330421039|gb|EGG95305.1| polar amino acid ABC transporter, inner membrane subunit [gamma proteobacterium IMCC1989] Length = 315 Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 64/200 (32%), Positives = 107/200 (53%), Gaps = 21/200 (10%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 +F+ ++G+V+ + T K A+ L + +I G P LV I + Sbjct: 128 IFAIIIGLVVGILRT-------TKNVIAMNLTTVYIEIIRGTPLLVQIFI---------- 170 Query: 251 LGQFNFIGGSTVSPEFMSLYIA-LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309 F F G+ + + M+ IA LS ++ A+IAEIVRSG+ ++P+GQ E A +LGL++ + Sbjct: 171 ---FYFFIGTVLDLDRMTAGIAALSIFSGAYIAEIVRSGIQSIPQGQTEGAKSLGLSYLQ 227 Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369 RLV+LPQA+R +PP+ Q++NL+K+SSL + DL G + + T E+ Sbjct: 228 TMRLVILPQAIRKTLPPMVGQFINLVKDSSLVSVIAITDLTKAGREVASATFSPFEVWFT 287 Query: 370 WMFIYLSLSIMIALFMNRLN 389 YL L+ +++ + R Sbjct: 288 IALCYLLLTGILSFALQRFE 307 Score = 39.3 bits (90), Expect = 0.99, Method: Compositional matrix adjust. Identities = 24/67 (35%), Positives = 38/67 (56%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151 G + T +++F +I A IIG +VG R + N + + VY+E+ R P LV IF Y Sbjct: 115 GMMMTIYISFFSLIFAIIIGLVVGILRTTKNVIAMNLTTVYIEIIRGTPLLVQIFIFYFF 174 Query: 152 VLSVLPI 158 + +VL + Sbjct: 175 IGTVLDL 181 >gi|217958227|ref|YP_002336773.1| amino acid ABC transporter, permease protein [Bacillus cereus AH187] gi|228983842|ref|ZP_04144037.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|229137441|ref|ZP_04266052.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus BDRD-ST26] gi|229154343|ref|ZP_04282463.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus ATCC 4342] gi|217065677|gb|ACJ79927.1| amino acid ABC transporter, permease protein [Bacillus cereus AH187] gi|228629167|gb|EEK85874.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus ATCC 4342] gi|228645999|gb|EEL02222.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus BDRD-ST26] gi|228775891|gb|EEM24262.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 218 Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 66/165 (40%), Positives = 104/165 (63%), Gaps = 17/165 (10%) Query: 235 LVLIALKYQLHFDKPVLG-QFN-FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292 LVLIA + +F PV+G N F+ G+ + L+ YTAAFIAE++R+G+++V Sbjct: 66 LVLIAFIF--YFALPVVGITLNGFVAGT----------VTLTVYTAAFIAEVIRAGILSV 113 Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352 +GQMEAA + GLT+ + ++LPQAM+ +IPPL +Q+LNL+KNSS+ + DL+ Sbjct: 114 AKGQMEAARSSGLTYVQGMYYIVLPQAMKIVIPPLGNQFLNLVKNSSILGIIAGMDLMYQ 173 Query: 353 GGTIINQTGQAIEI-ILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 G I +T ++ I + MF YL L+I +++ + L ++A KE Sbjct: 174 GDLISTKTFVTFDVYIFVGMF-YLILTIPLSMLVRYLEKRLA-KE 216 >gi|292669477|ref|ZP_06602903.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Selenomonas noxia ATCC 43541] gi|292648930|gb|EFF66902.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Selenomonas noxia ATCC 43541] Length = 223 Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 73/222 (32%), Positives = 119/222 (53%), Gaps = 15/222 (6%) Query: 177 SFPTLTMDTNA--KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234 SFP L + +I V S +G V+ L ++R H + + L +Y+ F G P Sbjct: 15 SFPLLLVGAGVTIQITVLSTAIGFVIGLIVG-VARISHVRLLRMLAEVYVEFFR--GTPL 71 Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294 LV I L Y F PVL G + P F++ A + A++AEI R+G+ +V Sbjct: 72 LVQIFLFY---FALPVLT------GQRIDP-FIAAISACGINSGAYVAEIFRAGIQSVDD 121 Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354 GQMEA +LG+T + R +++PQA + +IPPL ++++ +LK+SSL +GF +L G Sbjct: 122 GQMEAGRSLGMTWLQTMRYIIVPQAFKRVIPPLGNEFIAMLKDSSLVSVIGFEELTRRGQ 181 Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 II +T + EI + IYL +++ I+ F+ L + + + Sbjct: 182 LIIAKTYGSFEIWMSVAVIYLVMTLTISRFVAYLERRYRVND 223 Score = 39.7 bits (91), Expect = 0.77, Method: Compositional matrix adjust. Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 4/59 (6%) Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPF 167 +IG +VG R+S +L+ + VYVE FR P LV IF Y + LP+ + PF Sbjct: 39 VIGLIVGVARISHVRLLRMLAEVYVEFFRGTPLLVQIFLFYFA----LPVLTGQRIDPF 93 >gi|322389670|ref|ZP_08063218.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus parasanguinis ATCC 903] gi|321143669|gb|EFX39099.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus parasanguinis ATCC 903] Length = 727 Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 61/209 (29%), Positives = 112/209 (53%), Gaps = 23/209 (11%) Query: 190 FVFSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243 F + V+G++ +F+ R + + +PL+ ++ F+ +G+P L+ +Q Sbjct: 535 FAIAMVIGVIFGMFSVSPYKWLRWTAEIFVDVIRGIPLMILAAFIFWGIPNLIESVTGHQ 594 Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 P+ +F+ G+ IALS AA+IAEIVR G+ AVP GQMEA+ +L Sbjct: 595 ----SPI---NDFVAGT----------IALSLNAAAYIAEIVRGGIQAVPIGQMEASRSL 637 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363 G+++ K R ++LPQA + ++P +Q++ LK++++ A+G +L G II + Q+ Sbjct: 638 GISYGKTMRKIILPQATKLMLPNFVNQFVIALKDTTIVSAIGLVELFQTGKIIIARNYQS 697 Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392 ++ I YL + ++ F +L K+ Sbjct: 698 FKMYAILAVFYLVIITLLTRFAKKLEKKV 726 >gi|163800524|ref|ZP_02194425.1| amino acid ABC transporter, permease protein [Vibrio sp. AND4] gi|159175967|gb|EDP60761.1| amino acid ABC transporter, permease protein [Vibrio sp. AND4] Length = 265 Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 75/241 (31%), Positives = 126/241 (52%), Gaps = 19/241 (7%) Query: 158 IPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGK 217 +PD+ G + + +S +T+ +A +F+ +G+V +L RLS H K G Sbjct: 43 VPDYIAFYEDGEWWSAELISGLMVTLKISAISLIFTLAIGLVTALL--RLS---HSKVGN 97 Query: 218 ALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT 277 A+ + Y+ +I P LV I L Y + PV+G F S +ALS + Sbjct: 98 AIGVTYVE--VIRNTPLLVQIYLLYFVF--GPVIGL----------DRFSSAVLALSLFQ 143 Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 A+ AEI R+GL ++ +GQ EAA +LGL+ A + V+LPQ ++ +PPLT++ ++L+KN Sbjct: 144 GAYTAEIFRAGLSSIAKGQFEAAKSLGLSPFFAYKDVILPQVLQRTLPPLTNEVVSLIKN 203 Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 SS+ + DL + I+++T EI IYL+L++ ++ L K+ + Sbjct: 204 SSIVSVMAIFDLTTEARNIVSETAMPFEIWFTVAAIYLALTLTLSGLSAWLEHKLGASWR 263 Query: 398 K 398 K Sbjct: 264 K 264 >gi|320547054|ref|ZP_08041352.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus equinus ATCC 9812] gi|320448291|gb|EFW89036.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus equinus ATCC 9812] Length = 733 Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 59/209 (28%), Positives = 111/209 (53%), Gaps = 23/209 (11%) Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPTLVLIALKYQ 243 F + ++GI+ + A ++ + + +PL+ ++ F+ +G+P L+ +Q Sbjct: 541 FAIAMIIGIIFGMMAVAPNKVLRTISAIFVDVVRGIPLMIVAAFIFWGIPNLIESMTGHQ 600 Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 P+ +F++ IALS A+IAEIVR G+ AVP+GQMEA+ +L Sbjct: 601 ----SPI-------------NDFLAATIALSLNAGAYIAEIVRGGIEAVPKGQMEASRSL 643 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363 G+++ K + V+LPQA+R ++P +Q++ LK++++ A+G +L G II + Q+ Sbjct: 644 GISYGKTMQKVILPQAVRVMLPNFINQFVISLKDTTIVSAIGLVELFQTGKIIIARNYQS 703 Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392 + I IYL + ++ RL ++ Sbjct: 704 FRMYAILAVIYLVMITLLTRLAKRLEKRL 732 >gi|218234515|ref|YP_002365437.1| amino acid ABC transporter, permease protein [Bacillus cereus B4264] gi|229148979|ref|ZP_04277224.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus m1550] gi|218162472|gb|ACK62464.1| amino acid ABC transporter, permease protein [Bacillus cereus B4264] gi|228634519|gb|EEK91103.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus m1550] Length = 218 Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 67/165 (40%), Positives = 104/165 (63%), Gaps = 17/165 (10%) Query: 235 LVLIALKYQLHFDKPVLG-QFN-FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292 LVLIA + +F PV+G N F+ G+ L+ YTAAFIAE++R+G+++V Sbjct: 66 LVLIAFIF--YFALPVVGITLNGFVAGTA----------TLTVYTAAFIAEVIRAGILSV 113 Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352 +GQMEAA + GLT+ +A V+LPQA++ +IPPL +Q+LNL+KNSS+ + DL+ Sbjct: 114 AKGQMEAARSSGLTYVQAMYYVVLPQAVKIVIPPLGNQFLNLVKNSSILGIIAGTDLMYQ 173 Query: 353 GGTIINQTGQAIEI-ILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 G I +T ++ I + MF YL L+I +++ + L ++A KE Sbjct: 174 GDLISTKTFVTFDVYIFVGMF-YLILTIPLSMLVRYLEKRLA-KE 216 >gi|296876379|ref|ZP_06900431.1| arginine/histidine ABC superfamily ATP binding cassette transporter permease [Streptococcus parasanguinis ATCC 15912] gi|296432669|gb|EFH18464.1| arginine/histidine ABC superfamily ATP binding cassette transporter permease [Streptococcus parasanguinis ATCC 15912] Length = 754 Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 61/209 (29%), Positives = 112/209 (53%), Gaps = 23/209 (11%) Query: 190 FVFSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243 F + V+G++ +F+ R + + +PL+ ++ F+ +G+P L+ +Q Sbjct: 562 FAIAMVIGVIFGMFSVSPYKWLRWTAEIFVDVIRGIPLMILAAFIFWGIPNLIESVTGHQ 621 Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 P+ +F+ G+ IALS AA+IAEIVR G+ AVP GQMEA+ +L Sbjct: 622 ----SPI---NDFVAGT----------IALSLNAAAYIAEIVRGGIQAVPIGQMEASRSL 664 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363 G+++ K R ++LPQA + ++P +Q++ LK++++ A+G +L G II + Q+ Sbjct: 665 GISYGKTMRKIILPQATKLMLPNFVNQFVIALKDTTIVSAIGLVELFQTGKIIIARNYQS 724 Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392 ++ I YL + ++ F +L K+ Sbjct: 725 FKMYAILAVFYLVIITLLTRFAKKLEKKV 753 >gi|329770427|ref|ZP_08261809.1| hypothetical protein HMPREF0433_01573 [Gemella sanguinis M325] gi|328836550|gb|EGF86210.1| hypothetical protein HMPREF0433_01573 [Gemella sanguinis M325] Length = 213 Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 61/184 (33%), Positives = 110/184 (59%), Gaps = 11/184 (5%) Query: 216 GKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG------GSTVSPEFMSL 269 G + L IST+ +F + + + ++ + P+L Q I G + +P FMS Sbjct: 34 GIVVCLAKISTYRVFNIIATIYV----EIIRNTPILVQIMIIYFALPEVGISFTP-FMSA 88 Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329 IALS + A+++EI RSG++A+ +GQMEA +LGL++ + +L++LPQA+++ +P L + Sbjct: 89 IIALSINSGAYVSEIFRSGILAIDKGQMEAGRSLGLSYFQTMKLIILPQALKNSLPSLGN 148 Query: 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 ++++L+K SS+ VG AD++ T+ N T Q L+ IY ++ +++L + RL Sbjct: 149 EFISLVKESSIVYFVGVADIMFTANTVKNATYQTFGPYLVAAAIYFVITSILSLLVKRLE 208 Query: 390 AKIA 393 K+A Sbjct: 209 KKLA 212 >gi|225870779|ref|YP_002746726.1| glutamine ABC transporter, glutamine-binding protein/permease protein [Streptococcus equi subsp. equi 4047] gi|225700183|emb|CAW94346.1| putative glutamine ABC transporter, glutamine-binding protein/permease protein [Streptococcus equi subsp. equi 4047] Length = 721 Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 62/211 (29%), Positives = 110/211 (52%), Gaps = 27/211 (12%) Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPTLVLIALKYQ 243 F + V+GIV + A S++ + + +PL+ ++ F+ +G+P L+ +Q Sbjct: 529 FAIALVIGIVFGMMAVSPSKNLRMASTIFVDVVRGIPLMIVAAFIFWGVPNLIESMTGHQ 588 Query: 244 LHFDKPVLGQFNFIGGSTVSP--EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301 SP +F++ IALS A+IAEIVR G+ AVP GQMEA+ Sbjct: 589 -------------------SPINDFVAATIALSLNGGAYIAEIVRGGIEAVPAGQMEASR 629 Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361 +LGL++ R ++LPQA++ ++P +Q++ LK++++ A+G +L G II + Sbjct: 630 SLGLSYHTTMRRIILPQAIKLMLPNFINQFVISLKDTTIVSAIGLVELFQTGKIIIARNY 689 Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 Q+ + I IYL + ++ RL ++ Sbjct: 690 QSFRMYAILAVIYLIMITLLTRLAKRLEKRL 720 >gi|229541937|ref|ZP_04430997.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus coagulans 36D1] gi|229326357|gb|EEN92032.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus coagulans 36D1] Length = 217 Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 58/129 (44%), Positives = 87/129 (67%), Gaps = 2/129 (1%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F++ IALS YTAAFIAE VR+G+ +V +GQ+EAA + GLT+ +A R V+LPQA++ +IP Sbjct: 87 FIAGTIALSIYTAAFIAEAVRAGIQSVDKGQLEAARSTGLTYTQAMRYVVLPQAIKIVIP 146 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI-ILIWMFIYLSLSIMIALF 384 P+ +Q+LNL+KNSS+ DL+ I +T + I + MF YL L+I ++L Sbjct: 147 PIGNQFLNLVKNSSILGVFAGLDLMYYADLIHEKTWITFDTYIFVGMF-YLILTIPLSLL 205 Query: 385 MNRLNAKIA 393 +N L ++A Sbjct: 206 VNYLERRLA 214 Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 26/61 (42%), Positives = 39/61 (63%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151 GFVNT ++ G++ + I+G L+ RL+ KL+ +I VYVEV RNIP ++ FF Y Sbjct: 17 GFVNTIKISIIGLVASFILGNLIAVFRLAPVKLLNFIGAVYVEVIRNIPLILTGFFFYNG 76 Query: 152 V 152 + Sbjct: 77 L 77 >gi|134299235|ref|YP_001112731.1| polar amino acid ABC transporter, inner membrane subunit [Desulfotomaculum reducens MI-1] gi|134051935|gb|ABO49906.1| amino acid ABC transporter membrane protein, PAAT family [Desulfotomaculum reducens MI-1] Length = 223 Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 58/172 (33%), Positives = 105/172 (61%), Gaps = 13/172 (7%) Query: 226 TFLIFGLPTLV-LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284 T++I G+P L+ L+ L Y L F L +F TV+ I +S A+IAEI Sbjct: 62 TWVIRGVPLLLQLMFLYYGLPFMGLTLNEF------TVA------VIGMSVCGGAYIAEI 109 Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344 +R+G+ ++ +GQMEAA+++G+T+ +A R V+LPQA + ++PP+ ++++ L+K+S+L + Sbjct: 110 MRAGIQSIDKGQMEAALSMGMTYPQAMRRVILPQAYKRLLPPMGNEFITLMKDSALVSVI 169 Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 +L+ + N T + IEI ++ +YL ++ + +NRL K+A+ E Sbjct: 170 CMTELLRAANLLQNATFRPIEIYVVAGLLYLIMTTFFTMVVNRLEKKLAVSE 221 Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust. Identities = 22/61 (36%), Positives = 35/61 (57%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L+G V T L F + T+IG LV ++S+ K++ W +Y V R +P L+ + FL Sbjct: 18 LLLGAVMTIKLTFFAITFGTLIGLLVALAKISSFKILRWFGGLYTWVIRGVPLLLQLMFL 77 Query: 149 Y 149 Y Sbjct: 78 Y 78 >gi|47568092|ref|ZP_00238797.1| amino acid ABC transporter, permease protein [Bacillus cereus G9241] gi|47555246|gb|EAL13592.1| amino acid ABC transporter, permease protein [Bacillus cereus G9241] Length = 177 Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 66/165 (40%), Positives = 104/165 (63%), Gaps = 17/165 (10%) Query: 235 LVLIALKYQLHFDKPVLG-QFN-FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292 LVLIA + +F PV+G N F+ G+ + L+ YTAAFIAE++R+G+++V Sbjct: 25 LVLIAFIF--YFALPVIGITLNGFVAGT----------VTLTVYTAAFIAEVIRAGILSV 72 Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352 +GQMEAA + GLT+ + ++LPQAM+ +IPPL +Q+LNL+KNSS+ + DL+ Sbjct: 73 AKGQMEAARSSGLTYVQGMYYIVLPQAMKIVIPPLGNQFLNLVKNSSILGIIAGMDLMYQ 132 Query: 353 GGTIINQTGQAIEI-ILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 G I +T ++ I + MF YL L+I +++ + L ++A KE Sbjct: 133 GDLISTKTFVTFDVYIFVGMF-YLILTIPLSMLVRYLEKRLA-KE 175 >gi|195978381|ref|YP_002123625.1| glutamine ABC transporter, glutamine-binding protein/permease protein GlnP [Streptococcus equi subsp. zooepidemicus MGCS10565] gi|195975086|gb|ACG62612.1| glutamine ABC transporter, glutamine-binding protein/permease protein GlnP [Streptococcus equi subsp. zooepidemicus MGCS10565] Length = 713 Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 62/211 (29%), Positives = 110/211 (52%), Gaps = 27/211 (12%) Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPTLVLIALKYQ 243 F + V+GIV + A S++ + + +PL+ ++ F+ +G+P L+ +Q Sbjct: 521 FAIALVIGIVFGMMAVSPSKNLRMASTIFVDVVRGIPLMIVAAFIFWGVPNLIESMTGHQ 580 Query: 244 LHFDKPVLGQFNFIGGSTVSP--EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301 SP +F++ IALS A+IAEIVR G+ AVP GQMEA+ Sbjct: 581 -------------------SPINDFVAATIALSLNGGAYIAEIVRGGIEAVPAGQMEASR 621 Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361 +LGL++ R ++LPQA++ ++P +Q++ LK++++ A+G +L G II + Sbjct: 622 SLGLSYHTTMRRIILPQAIKLMLPNFINQFVISLKDTTIVSAIGLVELFQTGKIIIARNY 681 Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 Q+ + I IYL + ++ RL ++ Sbjct: 682 QSFRMYAILAVIYLIMITLLTRLAKRLEKRL 712 >gi|312876441|ref|ZP_07736425.1| polar amino acid ABC transporter, inner membrane subunit [Caldicellulosiruptor lactoaceticus 6A] gi|311796799|gb|EFR13144.1| polar amino acid ABC transporter, inner membrane subunit [Caldicellulosiruptor lactoaceticus 6A] Length = 220 Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 67/226 (29%), Positives = 117/226 (51%), Gaps = 32/226 (14%) Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSR--------HFHEKTGKALPLLYISTFLIFGL 232 +T++ A V G+V +LF R+S+ F+ + PLL F+ +GL Sbjct: 19 VTIELTAIAVTIGLVFGLVAALF--RISKIKVLNYIGSFYVWLFRGTPLLLQIFFIYYGL 76 Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292 P +V P L P F++ IAL + A+ AEI+R+ ++++ Sbjct: 77 PKIV------------PAL----------TLPAFLAGAIALIINSGAYTAEIIRAAILSI 114 Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352 RGQ EAA ALG+T+ + R V++PQ + +IPP+ ++++ LLK+SSL +G +L+ Sbjct: 115 DRGQYEAAKALGMTYLQTMRYVIVPQTYKRLIPPIGNEFIALLKDSSLVSTIGMVELMRA 174 Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 +QTG+ EI + + IYL+L+ + + N L ++ E++ Sbjct: 175 AQLKASQTGRDAEIYIAALVIYLALTTVFSTIFNWLEKRLGKYEQQ 220 >gi|315613252|ref|ZP_07888162.1| glutamine ABC superfamily ATP binding cassette transporter, amino acid-binding protein [Streptococcus sanguinis ATCC 49296] gi|315314814|gb|EFU62856.1| glutamine ABC superfamily ATP binding cassette transporter, amino acid-binding protein [Streptococcus sanguinis ATCC 49296] Length = 721 Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 63/209 (30%), Positives = 112/209 (53%), Gaps = 23/209 (11%) Query: 190 FVFSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243 F + V+GI+ +F+ RL + +PL+ ++ F+ +G+P Sbjct: 529 FAIAIVIGIIFGMFSVSPYKSLRLISEIFVDVIRGIPLMILAAFIFWGIP---------- 578 Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 +F + + GQ + I +F++ IALS AA+IAEIVR G+ AVP GQMEA+ +L Sbjct: 579 -NFIESITGQQSPIN------DFVAGTIALSLNAAAYIAEIVRGGIQAVPVGQMEASRSL 631 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363 G+++ K R ++LPQA + ++P +Q++ LK++++ A+G +L G II + Q+ Sbjct: 632 GISYGKTMRKIILPQATKLMLPNFVNQFVIALKDTTIVSAIGLVELFQTGKIIIARNYQS 691 Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392 ++ I YL + ++ RL +I Sbjct: 692 FKMYAILAIFYLVIITLLTRLAKRLEKRI 720 >gi|306829599|ref|ZP_07462789.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein/permease protein [Streptococcus mitis ATCC 6249] gi|304428685|gb|EFM31775.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein/permease protein [Streptococcus mitis ATCC 6249] Length = 721 Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 63/209 (30%), Positives = 112/209 (53%), Gaps = 23/209 (11%) Query: 190 FVFSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243 F + V+GI+ +F+ RL + +PL+ ++ F+ +G+P Sbjct: 529 FAIAIVIGIIFGMFSVSPYKSLRLISEIFVDVIRGIPLMILAAFIFWGIP---------- 578 Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 +F + + GQ + I +F++ IALS AA+IAEIVR G+ AVP GQMEA+ +L Sbjct: 579 -NFIESITGQQSPIN------DFVAGTIALSLNAAAYIAEIVRGGIQAVPVGQMEASRSL 631 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363 G+++ K R ++LPQA + ++P +Q++ LK++++ A+G +L G II + Q+ Sbjct: 632 GISYGKTMRKIILPQATKLMLPNFVNQFVIALKDTTIVSAIGLVELFQTGKIIIARNYQS 691 Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392 ++ I YL + ++ RL +I Sbjct: 692 FKMYAILAIFYLVIITLLTRLAKRLEKRI 720 >gi|293365541|ref|ZP_06612250.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus oralis ATCC 35037] gi|307703498|ref|ZP_07640440.1| bacterial extracellular solute-binding protein, family 3 [Streptococcus oralis ATCC 35037] gi|291315909|gb|EFE56353.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus oralis ATCC 35037] gi|307622905|gb|EFO01900.1| bacterial extracellular solute-binding protein, family 3 [Streptococcus oralis ATCC 35037] Length = 721 Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 63/209 (30%), Positives = 112/209 (53%), Gaps = 23/209 (11%) Query: 190 FVFSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243 F + V+GI+ +F+ RL + +PL+ ++ F+ +G+P Sbjct: 529 FAIAIVIGIIFGMFSVSPYKSLRLISEIFVDVIRGIPLMILAAFIFWGIP---------- 578 Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 +F + + GQ + I +F++ IALS AA+IAEIVR G+ AVP GQMEA+ +L Sbjct: 579 -NFIESITGQQSPIN------DFVAGTIALSLNAAAYIAEIVRGGIQAVPVGQMEASRSL 631 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363 G+++ K R ++LPQA + ++P +Q++ LK++++ A+G +L G II + Q+ Sbjct: 632 GISYGKTMRKIILPQATKLMLPNFVNQFVIALKDTTIVSAIGLVELFQTGKIIIARNYQS 691 Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392 ++ I YL + ++ RL +I Sbjct: 692 FKMYAILAIFYLVIITLLTRLAKRLEKRI 720 >gi|322375331|ref|ZP_08049844.1| glutamine ABC transporter, glutamine-binding protein/permease protein [Streptococcus sp. C300] gi|321279594|gb|EFX56634.1| glutamine ABC transporter, glutamine-binding protein/permease protein [Streptococcus sp. C300] Length = 721 Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 63/209 (30%), Positives = 112/209 (53%), Gaps = 23/209 (11%) Query: 190 FVFSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243 F + V+GI+ +F+ RL + +PL+ ++ F+ +G+P Sbjct: 529 FAIAIVIGIIFGMFSVSPYKSLRLISEIFVDVIRGIPLMILAAFIFWGIP---------- 578 Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 +F + + GQ + I +F++ IALS AA+IAEIVR G+ AVP GQMEA+ +L Sbjct: 579 -NFIESITGQQSPIN------DFVAGTIALSLNAAAYIAEIVRGGIQAVPVGQMEASRSL 631 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363 G+++ K R ++LPQA + ++P +Q++ LK++++ A+G +L G II + Q+ Sbjct: 632 GISYGKTMRKIILPQATKLMLPNFVNQFVIALKDTTIVSAIGLVELFQTGKIIIARNYQS 691 Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392 ++ I YL + ++ RL +I Sbjct: 692 FKMYAILAIFYLVIITLLTRLAKRLEKRI 720 >gi|157146735|ref|YP_001454054.1| hypothetical protein CKO_02509 [Citrobacter koseri ATCC BAA-895] gi|157083940|gb|ABV13618.1| hypothetical protein CKO_02509 [Citrobacter koseri ATCC BAA-895] Length = 246 Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 51/129 (39%), Positives = 81/129 (62%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+S I L +TAA + E VR+ + ++PRGQ AA+A+GLT +A R VLLP A R I+P Sbjct: 111 FLSSMICLGLFTAARVCEQVRAAIQSLPRGQKNAALAMGLTLPQAYRYVLLPNAYRVIVP 170 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 P+TS+ +NL+KNS++A +G D+ + G +++ + A E Y+ ++ +I L M Sbjct: 171 PMTSEMMNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAWESFTAITLAYVLINAVIMLVM 230 Query: 386 NRLNAKIAL 394 N + K+ L Sbjct: 231 NLVERKVRL 239 Score = 42.4 bits (98), Expect = 0.13, Method: Compositional matrix adjust. Identities = 38/131 (29%), Positives = 61/131 (46%), Gaps = 19/131 (14%) Query: 81 SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140 +++Y + GF T L+ + I A ++G+L G R N+ ++ + +YVE+FRN+P Sbjct: 17 GNTTYLGWLWSGFQVTVALSITAWIIAFLVGSLFGILRTVPNRFLSGMGTLYVELFRNVP 76 Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200 +V F Y V +LP N G+ F +D N + F+ S I L Sbjct: 77 LIVQFFTWYLVVPELLP--------------ENIGMWFKA-ELDPNIQFFLSSM---ICL 118 Query: 201 SLF-ATRLSRH 210 LF A R+ Sbjct: 119 GLFTAARVCEQ 129 >gi|225181291|ref|ZP_03734736.1| polar amino acid ABC transporter, inner membrane subunit [Dethiobacter alkaliphilus AHT 1] gi|225168071|gb|EEG76877.1| polar amino acid ABC transporter, inner membrane subunit [Dethiobacter alkaliphilus AHT 1] Length = 220 Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 69/225 (30%), Positives = 120/225 (53%), Gaps = 25/225 (11%) Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF---LIFGL 232 L LT+ +A + F++G V+ L K PL +++T +I G Sbjct: 17 LQGAVLTVQISAVAVLVGFLIGSVVGLV----------KLSSIRPLRFLATAYIEIIRGT 66 Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVS-PEFMSLYIALSCYTAAFIAEIVRSGLIA 291 P LV I L Y F + VS F + IALS + A++ EIVRSG+ + Sbjct: 67 PLLVQIVLIY-----------FGLASLNIVSLDRFTAGVIALSINSGAYVGEIVRSGIQS 115 Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 + +GQMEAA +LG+ + ++ R ++LPQA R IIPPL ++++ L+K+SSL A+GFA+L+ Sbjct: 116 IDKGQMEAARSLGMNYVRSMRFIILPQAFRRIIPPLVNEFIMLIKDSSLLFAIGFAELMQ 175 Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 G I +T + E+ + +Y ++ +++ + + + +++ Sbjct: 176 RGNAIRARTYKDFEVFIGIAAVYFVMTFILSRVASYVERRTRIRD 220 >gi|331266285|ref|YP_004325915.1| polar amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus oralis Uo5] gi|326682957|emb|CBZ00574.1| polar amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus oralis Uo5] Length = 721 Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 63/209 (30%), Positives = 112/209 (53%), Gaps = 23/209 (11%) Query: 190 FVFSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243 F + V+GI+ +F+ RL + +PL+ ++ F+ +G+P Sbjct: 529 FAIAIVIGIIFGMFSVSPYKSLRLISEIFVDVIRGIPLMILAAFIFWGIP---------- 578 Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 +F + + GQ + I +F++ IALS AA+IAEIVR G+ AVP GQMEA+ +L Sbjct: 579 -NFIESITGQQSPIN------DFVAGTIALSLNAAAYIAEIVRGGIQAVPVGQMEASRSL 631 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363 G+++ K R ++LPQA + ++P +Q++ LK++++ A+G +L G II + Q+ Sbjct: 632 GISYGKTMRKIILPQATKLMLPNFVNQFVIALKDTTIVSAIGLVELFQTGKIIIARNYQS 691 Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392 ++ I YL + ++ RL +I Sbjct: 692 FKMYAILAIFYLVIITLLTRLAKRLEKRI 720 >gi|212711637|ref|ZP_03319765.1| hypothetical protein PROVALCAL_02712 [Providencia alcalifaciens DSM 30120] gi|212685739|gb|EEB45267.1| hypothetical protein PROVALCAL_02712 [Providencia alcalifaciens DSM 30120] Length = 262 Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 48/98 (48%), Positives = 72/98 (73%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 EF++ ++ L+ YT FIAE VRSG+ V +GQ +AA+ALGLT ++ RLV+LPQA++ + Sbjct: 130 EFLAGFVGLTLYTVPFIAEEVRSGIRGVRQGQKQAALALGLTSWQSMRLVILPQAVKIAL 189 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362 PPL QY+N++KNSSL +A+G A+L V + +Q+ Q Sbjct: 190 PPLLGQYMNVVKNSSLTMAIGVAELSYVSRQVDSQSLQ 227 Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 52/180 (28%), Positives = 82/180 (45%), Gaps = 20/180 (11%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151 GF+ T W++ +I AT++G +V + R S + W VY+ +FRN P LV +FF Y + Sbjct: 39 GFLLTVWISICTIIAATLLGFIVASARDSQIAPLRWFVSVYISIFRNTPLLVQLFFWYFA 98 Query: 152 VLSVLPIP-------DHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFA 204 +LP H + + FG+ L SF L ++ F+ V S Sbjct: 99 SGEILPAAAMEWLNTPHEVDI-FGLTLGWP--SFEFLAGFVGLTLYTVPFIAEEVRS--G 153 Query: 205 TRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQF-NFIGGSTVS 263 R R ++ AL L + + LP V IAL P+LGQ+ N + S+++ Sbjct: 154 IRGVRQGQKQAALALGLTSWQSMRLVILPQAVKIAL-------PPLLGQYMNVVKNSSLT 206 >gi|218886439|ref|YP_002435760.1| polar amino acid ABC transporter inner membrane protein [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218757393|gb|ACL08292.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 337 Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 50/137 (36%), Positives = 87/137 (63%), Gaps = 1/137 (0%) Query: 255 NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLV 314 +G +SP + + +AL+ +T A++AEIVR+G+ +V RGQMEAA +LG+ + +A R V Sbjct: 199 EHVGLGGISPLWYGV-MALALFTGAYVAEIVRAGIQSVHRGQMEAARSLGMNYAQAMRKV 257 Query: 315 LLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374 +LPQA R I+PPL Q+++L+K+SSL + +L ++ + Q E+ ++ +Y Sbjct: 258 ILPQAFRRIMPPLAGQFISLIKDSSLLGVIAIRELTKATREVVTTSLQPFELWIVCAVLY 317 Query: 375 LSLSIMIALFMNRLNAK 391 L L+ ++LF+ L + Sbjct: 318 LVLTFTLSLFVQYLERR 334 >gi|315178664|gb|ADT85578.1| ABC-type amino acid transport system permease component [Vibrio furnissii NCTC 11218] Length = 245 Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 64/191 (33%), Positives = 102/191 (53%), Gaps = 23/191 (12%) Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265 R + + + +A+PLL + ++ +GLP L ++L HF V+ Sbjct: 78 RQANRVYVEVVRAIPLLVLLLWIYYGLPVLFDLSLN---HFTAGVM-------------- 120 Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 ALS +AF+AE+ R G+ A+ RGQ EAA ALGL + RLV+LPQA+R I+P Sbjct: 121 ------ALSLAESAFMAEVFRGGIQAIDRGQHEAAQALGLRDWQKMRLVILPQALRHILP 174 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PL +Q++ +LK SSL +G +DL ++ +EI + YL L ++++ + Sbjct: 175 PLGNQFIYILKMSSLVSVIGLSDLTRRANELVVTEYLPLEIYTFLVLEYLILILLVSYGV 234 Query: 386 NRLNAKIALKE 396 RL K+AL + Sbjct: 235 RRLEKKLALPQ 245 Score = 36.2 bits (82), Expect = 9.9, Method: Compositional matrix adjust. Identities = 25/73 (34%), Positives = 40/73 (54%), Gaps = 1/73 (1%) Query: 78 PYTSDS-SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136 P+T+ T ++ GF +T L+ M+ A +G +V LS + + RVYVEV Sbjct: 29 PFTAQGVRNLTFLIAGFGDTLSLSLLSMVLAMGLGLMVALPALSPRRTLRQANRVYVEVV 88 Query: 137 RNIPPLVVIFFLY 149 R IP LV++ ++Y Sbjct: 89 RAIPLLVLLLWIY 101 >gi|251796880|ref|YP_003011611.1| polar amino acid ABC transporter inner membrane protein [Paenibacillus sp. JDR-2] gi|247544506|gb|ACT01525.1| polar amino acid ABC transporter, inner membrane subunit [Paenibacillus sp. JDR-2] Length = 217 Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 68/204 (33%), Positives = 117/204 (57%), Gaps = 24/204 (11%) Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252 SF LG ++++F R+S PL +I T + + + L+ + + ++ P LG Sbjct: 32 SFALGTIIAVF--RIS--------SVKPLRWIGTAYVEFVRNIPLLLVVFVFYYGLPSLG 81 Query: 253 QF--NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 FI G+ + L+ YTA+F+AE +R+G++++P GQ EAA A GLT+ + Sbjct: 82 VTLSGFICGT----------VGLTVYTASFVAEAIRAGIMSIPTGQTEAARASGLTYTQT 131 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSS-LAVAVGFADLVSVGGTIINQTGQAIEIILI 369 R V+LPQA++ +IPPL++Q++NL+KNSS L V GF DL+ G + ++T + + Sbjct: 132 MRHVVLPQAVKIVIPPLSNQFINLVKNSSILGVFAGF-DLMYYGDQVASKTYATFDTYIF 190 Query: 370 WMFIYLSLSIMIALFMNRLNAKIA 393 +YL L+I ++ +L ++A Sbjct: 191 VAALYLVLTIPLSFAALKLERRLA 214 Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 24/58 (41%), Positives = 36/58 (62%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 GFVNT W + ++ + +GT++ R+S+ K + WI YVE RNIP L+V+F Y Sbjct: 17 GFVNTIWSSVVALLGSFALGTIIAVFRISSVKPLRWIGTAYVEFVRNIPLLLVVFVFY 74 >gi|168484864|ref|ZP_02709809.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae CDC1873-00] gi|172041971|gb|EDT50017.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae CDC1873-00] Length = 721 Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 62/209 (29%), Positives = 113/209 (54%), Gaps = 23/209 (11%) Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPTLVLIALKYQ 243 F + V+GI+ +F+ + F + + +PL+ ++ F+ +G+P Sbjct: 529 FAIAIVIGIIFGMFSVSPYKSFRVISEIFVDVIRGIPLMILAAFIFWGIP---------- 578 Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 +F + + GQ + I +F++ IALS AA+IAEIVR G+ AVP GQMEA+ +L Sbjct: 579 -NFIESITGQQSPIN------DFVAGTIALSLNAAAYIAEIVRGGIQAVPVGQMEASRSL 631 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363 G+++ K R ++LPQA + ++P +Q++ LK++++ A+G +L G II + Q+ Sbjct: 632 GISYGKTMRKIILPQATKLMLPNFVNQFVIALKDTTIVSAIGLVELFQTGKIIIARNYQS 691 Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392 ++ I YL + ++ RL +I Sbjct: 692 FKMYAILAIFYLVIITLLTRLAKRLEKRI 720 >gi|322387683|ref|ZP_08061292.1| amino acid ABC superfamily ATP binding cassette transporter [Streptococcus infantis ATCC 700779] gi|321141550|gb|EFX37046.1| amino acid ABC superfamily ATP binding cassette transporter [Streptococcus infantis ATCC 700779] Length = 481 Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 63/209 (30%), Positives = 113/209 (54%), Gaps = 23/209 (11%) Query: 190 FVFSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243 F + V+GI+ +F+ RL + +PL+ ++ F+ +G+P Sbjct: 289 FAIAIVIGIIFGMFSVSPYKPLRLIAEIFVDVIRGIPLMILAAFIFWGIP---------- 338 Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 +F + + GQ + I +F++ IALS +AA+IAEIVR G+ AVP GQMEA+ +L Sbjct: 339 -NFIESLTGQQSPIN------DFVAGTIALSLNSAAYIAEIVRGGIKAVPVGQMEASRSL 391 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363 G+++ K R ++LPQA + ++P +Q++ LK++++ A+G +L G II + Q+ Sbjct: 392 GISYGKTMRKIVLPQATKLMLPNFVNQFVIALKDTTIVSAIGLVELFQTGKIIIARNYQS 451 Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392 ++ I YL + ++ RL +I Sbjct: 452 FKMYAILAVFYLVIITLLTRLAKRLEKRI 480 >gi|49082008|gb|AAT50404.1| PA4194 [synthetic construct] Length = 233 Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 54/117 (46%), Positives = 78/117 (66%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 E S +AL+ YTAAF++E +RSG+ AVP Q+EAA ALG + + RLV+LPQA+R + Sbjct: 99 EAASAIVALTLYTAAFMSEDMRSGIRAVPTVQLEAARALGFGYLASMRLVILPQALRITV 158 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 PPL SQ LNL KN+S+A +G A+L+ G + + T ++ E YLS+S++I Sbjct: 159 PPLISQTLNLWKNTSIATVIGVAELMYQAGQVESSTFRSFESFAFATAAYLSVSLLI 215 >gi|15599389|ref|NP_252883.1| permease of ABC transporter [Pseudomonas aeruginosa PAO1] gi|107103711|ref|ZP_01367629.1| hypothetical protein PaerPA_01004782 [Pseudomonas aeruginosa PACS2] gi|218889477|ref|YP_002438341.1| putative permease of ABC transporter [Pseudomonas aeruginosa LESB58] gi|254237069|ref|ZP_04930392.1| hypothetical protein PACG_03106 [Pseudomonas aeruginosa C3719] gi|254242876|ref|ZP_04936198.1| hypothetical protein PA2G_03645 [Pseudomonas aeruginosa 2192] gi|9950404|gb|AAG07581.1|AE004835_10 probable permease of ABC transporter [Pseudomonas aeruginosa PAO1] gi|126169000|gb|EAZ54511.1| hypothetical protein PACG_03106 [Pseudomonas aeruginosa C3719] gi|126196254|gb|EAZ60317.1| hypothetical protein PA2G_03645 [Pseudomonas aeruginosa 2192] gi|218769700|emb|CAW25460.1| probable permease of ABC transporter [Pseudomonas aeruginosa LESB58] Length = 232 Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 54/117 (46%), Positives = 78/117 (66%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 E S +AL+ YTAAF++E +RSG+ AVP Q+EAA ALG + + RLV+LPQA+R + Sbjct: 99 EAASAIVALTLYTAAFMSEDMRSGIRAVPTVQLEAARALGFGYLASMRLVILPQALRITV 158 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 PPL SQ LNL KN+S+A +G A+L+ G + + T ++ E YLS+S++I Sbjct: 159 PPLISQTLNLWKNTSIATVIGVAELMYQAGQVESSTFRSFESFAFATAAYLSVSLLI 215 >gi|229056416|ref|ZP_04195829.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus AH603] gi|228720890|gb|EEL72439.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus AH603] Length = 206 Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 65/165 (39%), Positives = 104/165 (63%), Gaps = 17/165 (10%) Query: 235 LVLIALKYQLHFDKPVLG-QFN-FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292 LVLIA + +F PV+G N F+ G+ + L+ YTA+FIAE++R+G+++V Sbjct: 54 LVLIAFIF--YFALPVIGITLNGFVAGT----------VTLTVYTASFIAEVIRAGILSV 101 Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352 +GQMEAA + GLT+ + V+LPQAM+ +IPPL +Q+LNL+KNSS+ + DL+ Sbjct: 102 AKGQMEAARSSGLTYVQGMYYVVLPQAMKIVIPPLGNQFLNLVKNSSILGIIAGTDLMYQ 161 Query: 353 GGTIINQTGQAIEI-ILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 G I +T ++ I + MF YL L++ +++ + L ++A KE Sbjct: 162 GDLISTKTLVTFDVYIFVGMF-YLILTLPLSMLVRYLEKRLA-KE 204 >gi|209516855|ref|ZP_03265705.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. H160] gi|209502671|gb|EEA02677.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. H160] Length = 242 Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 59/143 (41%), Positives = 81/143 (56%), Gaps = 6/143 (4%) Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP--EFMSLYIALSCYT 277 PLL F FG TL+ L+ PV + G + P EF++ ++ L+CY+ Sbjct: 64 PLLVQLLFWYFGAATLLPQPWMEWLNASHPV----SLWGCTIAWPSFEFVAGWVGLTCYS 119 Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 AFI E R+G+ V Q +AA ALGLT A R V+LPQA+R PPL QY+NL+KN Sbjct: 120 TAFIGEEFRAGMRGVKETQHQAAAALGLTPLAAFRYVILPQAIRIATPPLAGQYMNLVKN 179 Query: 338 SSLAVAVGFADLVSVGGTIINQT 360 SSLA+ +G A+L V + +T Sbjct: 180 SSLAMTIGLAELSYVSRQVDTET 202 >gi|238759569|ref|ZP_04620731.1| Binding-protein-dependent transport system inner membrane component [Yersinia aldovae ATCC 35236] gi|238702228|gb|EEP94783.1| Binding-protein-dependent transport system inner membrane component [Yersinia aldovae ATCC 35236] Length = 245 Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 47/96 (48%), Positives = 69/96 (71%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 EF++ +I L+CY+ AFIAE +R+G+ V +GQ AA ALGLT +A R V+LPQA++ + Sbjct: 113 EFLAGFIGLTCYSTAFIAEELRAGISGVAKGQKYAAHALGLTGWQAMRHVVLPQALKIAM 172 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 PPL QY+N++KNSSLA+A+G A+L + +T Sbjct: 173 PPLLGQYMNIIKNSSLAMAIGVAELSYASRQVETET 208 Score = 44.3 bits (103), Expect = 0.037, Method: Compositional matrix adjust. Identities = 22/66 (33%), Positives = 38/66 (57%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151 GF+ T W++ ++ +T++G L+ A R S + W+ Y +FRN P L+ +FF Y + Sbjct: 22 GFLLTLWISACTVVASTLLGFLLAAARDSELNGLQWLAIGYSTLFRNTPLLIQLFFWYFA 81 Query: 152 VLSVLP 157 +LP Sbjct: 82 ASQLLP 87 >gi|307708790|ref|ZP_07645252.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus mitis NCTC 12261] gi|307615156|gb|EFN94367.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus mitis NCTC 12261] Length = 275 Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 62/209 (29%), Positives = 112/209 (53%), Gaps = 23/209 (11%) Query: 190 FVFSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243 F + V+GI+ +F+ R+ + +PL+ ++ F+ +G+P Sbjct: 83 FAIAIVIGIIFGMFSVSPYKSLRVISEIFVDVIRGIPLMILAAFIFWGIP---------- 132 Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 +F + + GQ + I +F++ IALS AA+IAEIVR G+ AVP GQMEA+ +L Sbjct: 133 -NFIESITGQQSPIN------DFVAGTIALSLNAAAYIAEIVRGGIQAVPVGQMEASRSL 185 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363 G+++ K R ++LPQA + ++P +Q++ LK++++ A+G +L G II + Q+ Sbjct: 186 GISYGKTMRKIILPQATKLMLPNFVNQFVIALKDTTIVSAIGLVELFQTGKIIIARNYQS 245 Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392 ++ I YL + ++ RL +I Sbjct: 246 FKMYAILAIFYLVIITLLTRLAKRLEKRI 274 >gi|237730632|ref|ZP_04561113.1| glutamate/aspartate transport system permease [Citrobacter sp. 30_2] gi|226906171|gb|EEH92089.1| glutamate/aspartate transport system permease [Citrobacter sp. 30_2] Length = 246 Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 51/129 (39%), Positives = 81/129 (62%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+S + L +TAA + E VR+ + ++PRGQ AA+A+GLT +A R VLLP A R I+P Sbjct: 111 FLSSMLCLGLFTAARVCEQVRAAIQSLPRGQKNAALAMGLTLPQAYRYVLLPNAYRVIVP 170 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 P+TS+ +NL+KNS++A +G D+ + G +++ + A E Y+ ++ +I L M Sbjct: 171 PMTSEMMNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAWESFTAITLAYVLINAVIMLVM 230 Query: 386 NRLNAKIAL 394 N + KI L Sbjct: 231 NLVERKIRL 239 Score = 42.7 bits (99), Expect = 0.10, Method: Compositional matrix adjust. Identities = 26/77 (33%), Positives = 43/77 (55%) Query: 81 SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140 +++Y + GF T L+ + I A +IG+L G R N+ ++ I +YVE+FRN+P Sbjct: 17 GNTTYLGWLWSGFQVTVALSITAWIIAFLIGSLFGILRTVPNRFLSGIGTLYVELFRNVP 76 Query: 141 PLVVIFFLYKSVLSVLP 157 +V F Y + +LP Sbjct: 77 LIVQFFTWYLVIPELLP 93 >gi|54302942|ref|YP_132935.1| putative amino acid ABC transporter, permease protein [Photobacterium profundum SS9] gi|46916370|emb|CAG23135.1| putative amino acid ABC transporter, permease protein [Photobacterium profundum SS9] Length = 276 Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 77/235 (32%), Positives = 120/235 (51%), Gaps = 26/235 (11%) Query: 165 LPFGMFLNNRGLSFPT-------LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGK 217 +P ++ + G FP +T+ +A +F+ ++G+V +L RLS G+ Sbjct: 56 IPQYLWFIDDGEWFPAELLEGLFVTLKISAVSLIFTLLIGLVTALL--RLSDSI---VGR 110 Query: 218 ALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT 277 L YI LI P LV I L Y + PVLG F + +ALS + Sbjct: 111 GLARGYIE--LIRNTPLLVQIYLLYFVF--GPVLGL----------ERFTTAVLALSLFQ 156 Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 A+ AEI R+GL +P+GQ EA +LGL+ R V+LPQ +R I+PPLT++ ++L+KN Sbjct: 157 GAYTAEIFRAGLNNIPKGQFEACSSLGLSAIDGYRFVILPQMIRRILPPLTNETVSLVKN 216 Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 SS+ + DL + G I+ T E+ IYL +++M++ F L K+ Sbjct: 217 SSIVSIMAIFDLTTEGRNIVADTAMPFEVWFTVAGIYLCVTLMLSGFAAWLEHKM 271 >gi|317486430|ref|ZP_07945257.1| His/Glu/Gln/Arg/opine family amino ABC transporter [Bilophila wadsworthia 3_1_6] gi|316922340|gb|EFV43599.1| His/Glu/Gln/Arg/opine family amino ABC transporter [Bilophila wadsworthia 3_1_6] Length = 255 Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 58/142 (40%), Positives = 86/142 (60%), Gaps = 1/142 (0%) Query: 254 FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313 F F V P F + +AL + A++AE+ R+GL +VPR Q EA I+LGL RL Sbjct: 115 FLFAPAIGVGP-FGAAVLALGLFEGAYMAELFRAGLQSVPRAQWEAGISLGLGVWNTLRL 173 Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI 373 V+LPQA+R ++PPLTSQ ++L+K++SL A+ ADL +I T A EI LI + Sbjct: 174 VILPQAVRRMLPPLTSQLVSLIKDTSLVSAIAVADLTMQAQVLIADTFLAFEIWLIVAAL 233 Query: 374 YLSLSIMIALFMNRLNAKIALK 395 YL+L++ +AL + + A + Sbjct: 234 YLALTLCVALPARWMERRYAWR 255 >gi|300722326|ref|YP_003711611.1| glutamate/aspartate ABC transporter membrane protein [Xenorhabdus nematophila ATCC 19061] gi|297628828|emb|CBJ89406.1| glutamate/aspartate transport protein (ABC superfamily, membrane) [Xenorhabdus nematophila ATCC 19061] Length = 246 Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 52/129 (40%), Positives = 79/129 (61%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+S I L +TAA I E VR+ + ++P+GQ A +A+GLT + R VLLP A R IIP Sbjct: 111 FISSMICLGLFTAARICEQVRAAIQSLPKGQKAAGLAMGLTLPQTYRYVLLPNAYRVIIP 170 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 P+TS+ LNL+KNS++A +G D+ + G +++ + A E Y+ ++++I L M Sbjct: 171 PMTSEMLNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAYETFTAITLAYIGINLVIMLAM 230 Query: 386 NRLNAKIAL 394 L KI L Sbjct: 231 TLLEKKIRL 239 Score = 46.2 bits (108), Expect = 0.009, Method: Compositional matrix adjust. Identities = 29/77 (37%), Positives = 41/77 (53%) Query: 81 SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140 +++Y ++ GF T L+ I A I+G+L G R NK +A I YVE+FRN+P Sbjct: 17 GNTTYLGWLISGFQVTITLSICAWIIAFIVGSLFGILRTVPNKFLAGIGTCYVELFRNVP 76 Query: 141 PLVVIFFLYKSVLSVLP 157 +V F Y V LP Sbjct: 77 LIVQFFTWYMVVPEFLP 93 >gi|283834046|ref|ZP_06353787.1| glutamate/aspartate ABC transporter, permease protein [Citrobacter youngae ATCC 29220] gi|291070189|gb|EFE08298.1| glutamate/aspartate ABC transporter, permease protein [Citrobacter youngae ATCC 29220] Length = 246 Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 51/129 (39%), Positives = 81/129 (62%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+S + L +TAA + E VR+ + ++PRGQ AA+A+GLT +A R VLLP A R I+P Sbjct: 111 FLSSMLCLGLFTAARVCEQVRAAIQSLPRGQKNAALAMGLTLPQAYRYVLLPNAYRVIVP 170 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 P+TS+ +NL+KNS++A +G D+ + G +++ + A E Y+ ++ +I L M Sbjct: 171 PMTSEMMNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAWESFTAITLAYVLINAVIMLVM 230 Query: 386 NRLNAKIAL 394 N + KI L Sbjct: 231 NLVERKIRL 239 Score = 42.7 bits (99), Expect = 0.088, Method: Compositional matrix adjust. Identities = 38/131 (29%), Positives = 62/131 (47%), Gaps = 19/131 (14%) Query: 81 SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140 +++Y + GF T L+ + I A +IG+L G R N+ ++ I +YVE+FRN+P Sbjct: 17 GNTTYLGWLWSGFQVTVALSITAWIIAFLIGSLFGILRTVPNRFLSGIGTLYVELFRNVP 76 Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200 +V F Y + +LP N G+ F + +D N + F+ S + L Sbjct: 77 LIVQFFTWYLVIPELLP--------------ENIGMWFKS-ELDPNIQFFLSSM---LCL 118 Query: 201 SLF-ATRLSRH 210 LF A R+ Sbjct: 119 GLFTAARVCEQ 129 >gi|121535518|ref|ZP_01667327.1| polar amino acid ABC transporter, inner membrane subunit [Thermosinus carboxydivorans Nor1] gi|121305937|gb|EAX46870.1| polar amino acid ABC transporter, inner membrane subunit [Thermosinus carboxydivorans Nor1] Length = 221 Score = 97.4 bits (241), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 56/167 (33%), Positives = 98/167 (58%), Gaps = 10/167 (5%) Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290 G P LV I + ++F P+ + G + P F++ A + A++AEI R+G+ Sbjct: 64 GTPLLVQI---FIIYFAIPI------VIGQRIDP-FIAAITACGINSGAYVAEIFRAGIQ 113 Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 ++ +GQMEA +LG++ + R ++LPQA + IIPPL ++++ +LK+SSL +GF +L Sbjct: 114 SIDKGQMEAGRSLGMSWAQTMRYIILPQAFKRIIPPLGNEFIAMLKDSSLVSVIGFEELT 173 Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 G II +T + EI L FIYL +++ I+ ++ L + + +K Sbjct: 174 RRGQLIIARTYGSFEIWLTVAFIYLVMTLTISRLVDYLERRYKIDDK 220 >gi|257455525|ref|ZP_05620757.1| ABC glutamate/aspartate transporter, inner membrane subunit GltJ [Enhydrobacter aerosaccus SK60] gi|257447094|gb|EEV22105.1| ABC glutamate/aspartate transporter, inner membrane subunit GltJ [Enhydrobacter aerosaccus SK60] Length = 257 Score = 97.4 bits (241), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 66/210 (31%), Positives = 111/210 (52%), Gaps = 9/210 (4%) Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH--FD 247 ++ + ++G +L + R KT +A+ Y+S F +P L+ + + + + Sbjct: 49 WLIALIIGTILGIM-----RTLPNKTARAIGTAYVSFFR--NIPLLIQLFFWFYVAPTWL 101 Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307 P L ++ F + +S I L +TAA I E VR+G+ ++P+GQ AA ALG T Sbjct: 102 TPALQKWWFQELDPNTSAVISASIGLGLFTAARIVEQVRTGIESLPKGQTNAAYALGFTL 161 Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367 + R ++LPQA R I+PP++S+ N KN+S+A VG +L+S TI T IE+ Sbjct: 162 PQTYRHIVLPQAFRVILPPMSSELTNCFKNASVASLVGVTELISQTKTISEYTQNNIEVY 221 Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 IYL ++++ FM L K+ +K + Sbjct: 222 TFTTIIYLLFNLVLIYFMTWLEKKLRIKGQ 251 Score = 41.2 bits (95), Expect = 0.31, Method: Compositional matrix adjust. Identities = 26/69 (37%), Positives = 35/69 (50%) Query: 81 SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140 + Y +L GF + SG + A IIGT++G R NK I YV FRNIP Sbjct: 26 GNEVYWQWLLTGFKWLLVIGGSGWLIALIIGTILGIMRTLPNKTARAIGTAYVSFFRNIP 85 Query: 141 PLVVIFFLY 149 L+ +FF + Sbjct: 86 LLIQLFFWF 94 >gi|312135671|ref|YP_004003009.1| polar amino acid ABC transporter inner membrane subunit [Caldicellulosiruptor owensensis OL] gi|311775722|gb|ADQ05209.1| polar amino acid ABC transporter, inner membrane subunit [Caldicellulosiruptor owensensis OL] Length = 220 Score = 97.4 bits (241), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 67/225 (29%), Positives = 115/225 (51%), Gaps = 32/225 (14%) Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSR--------HFHEKTGKALPLLYISTFLIFGL 232 +T++ A + G+V +LF R+S+ F+ + PLL F+ +GL Sbjct: 19 VTIELTAIAVTIGLIFGLVAALF--RISKIKLLNYVGSFYVWLFRGTPLLLQIFFIYYGL 76 Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292 P +V P L P F++ IAL + A+ AEI+R+ ++++ Sbjct: 77 PKIV------------PAL----------TLPAFLAGAIALIINSGAYTAEIIRAAILSI 114 Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352 RGQ EAA ALG+T+ + R V++PQ + +IPP+ ++++ LLK+SSL +G +L+ Sbjct: 115 DRGQYEAAKALGMTYIQTMRYVIIPQTYKRLIPPIGNEFIALLKDSSLVSTIGMVELMRA 174 Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 +QTG+ EI L + IYL+L+ + N L ++ E+ Sbjct: 175 AQLKASQTGRDAEIYLAALVIYLALTTIFTTIFNWLEKRLGKYEQ 219 >gi|149002609|ref|ZP_01827541.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae SP14-BS69] gi|147759220|gb|EDK66213.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae SP14-BS69] Length = 492 Score = 97.4 bits (241), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 62/209 (29%), Positives = 112/209 (53%), Gaps = 23/209 (11%) Query: 190 FVFSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243 F + V+GI+ +F+ R+ + +PL+ ++ F+ +G+P Sbjct: 300 FAIAIVIGIIFGMFSVSPYKSLRVISEIFVDVIRGIPLMILAAFIFWGIP---------- 349 Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 +F + + GQ + I +F++ IALS AA+IAEIVR G+ AVP GQMEA+ +L Sbjct: 350 -NFIESITGQQSPIN------DFVAGTIALSLNAAAYIAEIVRGGIQAVPVGQMEASRSL 402 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363 G+++ K R ++LPQA + ++P +Q++ LK++++ A+G +L G II + Q+ Sbjct: 403 GISYGKTMRKIILPQATKLMLPNFVNQFVIALKDTTIVSAIGLVELFQTGKIIIARNYQS 462 Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392 ++ I YL + ++ RL +I Sbjct: 463 FKMYAILAIFYLVIITLLTRLAKRLEKRI 491 >gi|56962546|ref|YP_174272.1| glutamine ABC transporter permease [Bacillus clausii KSM-K16] gi|56908784|dbj|BAD63311.1| glutamine ABC transporter permease [Bacillus clausii KSM-K16] Length = 211 Score = 97.4 bits (241), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 54/123 (43%), Positives = 80/123 (65%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + L YT+AFIAE +R+G+ A+P GQMEAA + GLT+ +A R V+LPQA++++IPPL +Q Sbjct: 85 LGLLIYTSAFIAEAIRAGIQAIPTGQMEAARSSGLTYTQALRFVILPQAIKTVIPPLGNQ 144 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 LNL+KNSS+ VG ADL+ G I + T + I YL L+I ++ + Sbjct: 145 TLNLVKNSSILAVVGGADLMYQGDIINSMTFSPYAVYGIVALFYLLLTIPLSWGIGYYEK 204 Query: 391 KIA 393 ++A Sbjct: 205 RLA 207 Score = 46.2 bits (108), Expect = 0.009, Method: Compositional matrix adjust. Identities = 22/66 (33%), Positives = 38/66 (57%) Query: 84 SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143 Y A L GF+ T + ++ + ++GTL+ R+S +++ W+ YVE FRNIP L+ Sbjct: 7 DYWDAFLSGFLQTLKASTYALVGSFVVGTLIAVMRISTIRVLNWLGTAYVEFFRNIPLLL 66 Query: 144 VIFFLY 149 +F + Sbjct: 67 TVFIFW 72 >gi|152974369|ref|YP_001373886.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152023121|gb|ABS20891.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus cytotoxicus NVH 391-98] Length = 233 Score = 97.4 bits (241), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 63/162 (38%), Positives = 102/162 (62%), Gaps = 16/162 (9%) Query: 235 LVLIALKYQLHFDKPVLGQF--NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292 +VLIA + +F PV+G F+ G+ AL+ YTA+FIAE +R+G+++V Sbjct: 81 IVLIAFAF--YFAFPVVGVTLSGFVAGTA----------ALTIYTASFIAEAIRAGILSV 128 Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352 +GQMEAA + GLT+ +A V+LPQA++ +IPPL +Q+LNL+KNSS+ + ADL+ Sbjct: 129 AKGQMEAARSSGLTYVQAMYYVVLPQAIKIVIPPLGNQFLNLVKNSSILGIIAGADLMYQ 188 Query: 353 GGTIINQTGQAIEI-ILIWMFIYLSLSIMIALFMNRLNAKIA 393 G I +T ++ I + MF YL L++ +++ + L ++A Sbjct: 189 GDLISTRTFVTFDVYIFVGMF-YLLLTVPLSMLVRYLEKRLA 229 >gi|257895699|ref|ZP_05675352.1| amino acid ABC transporter [Enterococcus faecium Com12] gi|257832264|gb|EEV58685.1| amino acid ABC transporter [Enterococcus faecium Com12] Length = 535 Score = 97.4 bits (241), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 63/209 (30%), Positives = 111/209 (53%), Gaps = 29/209 (13%) Query: 190 FVFSFVLGIVLSLF------ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243 F + V+G++ LF A R + + +P++ ++ F+ FGLP +V Sbjct: 349 FALAIVIGVIFGLFSVAPIRALRTVASIYVDIIRGIPMMVLAFFIFFGLPGIV------- 401 Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 G T+ P+F++ I L+ +A+IAEIVR G+ AVP GQMEA+ +L Sbjct: 402 ---------------GFTI-PDFIAGVITLTLNASAYIAEIVRGGINAVPVGQMEASRSL 445 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363 GL++ + + ++LPQA+R +IP +Q++ LK++++ A+G +L+ G I+ +T Q+ Sbjct: 446 GLSYNRTMQKIILPQAIRIMIPSFVNQFVISLKDTTIISAIGVVELLQTGKIIVARTTQS 505 Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392 + LI +YL L + L K+ Sbjct: 506 TYVYLIIAIMYLILITALTKLAKVLEKKV 534 >gi|152986056|ref|YP_001348447.1| putative amino acid permease [Pseudomonas aeruginosa PA7] gi|150961214|gb|ABR83239.1| probable amino acid permease [Pseudomonas aeruginosa PA7] Length = 238 Score = 97.4 bits (241), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 63/172 (36%), Positives = 95/172 (55%), Gaps = 10/172 (5%) Query: 220 PLLYISTFLIFGLPTLVLIALKYQLH--FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT 277 PLL F FG+P L+ L L+ + P+L +F EF++ L+ YT Sbjct: 65 PLLVQLFFWYFGVPALLPEELVSWLNTPHETPLLDWPSF--------EFLAGAWGLTLYT 116 Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 +AF+AE R+G+ +V Q A +ALGLT R+ R+V+LPQA+R+ +PPL QY+N LKN Sbjct: 117 SAFVAEEFRAGIASVRPEQRAAGLALGLTQRQVWRVVVLPQALRTALPPLLGQYMNALKN 176 Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 SSLA+A+G A+L + +T + + I +Y+ +I F L Sbjct: 177 SSLAMAIGLAELSYASRQVETETFKTFQAFGIATLLYIGAIALIEAFGQALQ 228 Score = 44.7 bits (104), Expect = 0.027, Method: Compositional matrix adjust. Identities = 20/48 (41%), Positives = 30/48 (62%) Query: 110 IGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLP 157 +G + RLS +L++W R Y+ +FRN P LV +FF Y V ++LP Sbjct: 35 VGAPLAIARLSRRRLLSWPARAYLALFRNTPLLVQLFFWYFGVPALLP 82 >gi|170695394|ref|ZP_02886540.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia graminis C4D1M] gi|170139794|gb|EDT07976.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia graminis C4D1M] Length = 246 Score = 97.4 bits (241), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 52/129 (40%), Positives = 78/129 (60%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F S I L +TAA + E VRSG+ A+PRGQ A +A+G T + R VLLP A R I+P Sbjct: 111 FSSSIICLGLFTAARVCEQVRSGINALPRGQRAAGLAMGFTQWQTYRYVLLPVAYRIIVP 170 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PLTS++LN+ KNS++A +G DL + +++ T Q E + Y+ +++++ FM Sbjct: 171 PLTSEFLNIFKNSAVASTIGLLDLSAQARQLVDYTSQTYESFIAVTLAYVLINLVVMQFM 230 Query: 386 NRLNAKIAL 394 + AK L Sbjct: 231 RWVEAKTRL 239 Score = 43.5 bits (101), Expect = 0.056, Method: Compositional matrix adjust. Identities = 27/77 (35%), Positives = 41/77 (53%) Query: 81 SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140 ++Y +L GF T ++ S + A I+G+L G R NK + I +YV +FRNIP Sbjct: 18 EPTTYLGWLLSGFWVTITVSLSAWVIALIVGSLFGVLRTVPNKWASGIGTLYVAIFRNIP 77 Query: 141 PLVVIFFLYKSVLSVLP 157 +V F Y + +LP Sbjct: 78 LIVQFFIWYLVIPELLP 94 >gi|331670094|ref|ZP_08370939.1| putative amino-acid ABC transporter permease protein YhdX [Escherichia coli TA271] gi|331063007|gb|EGI34921.1| putative amino-acid ABC transporter permease protein YhdX [Escherichia coli TA271] Length = 194 Score = 97.4 bits (241), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 53/151 (35%), Positives = 84/151 (55%) Query: 30 QIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAI 89 QI+ + + I W +N N+ ++ G FL AGF I Q ++ Y +Y Sbjct: 31 QILAVVAVVGIVGWLFHNTVTNLNNRGITSGFAFLDRGAGFGIVQHLIDYQQGDTYGRVF 90 Query: 90 LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 +VG +NT ++ ++ A+++G +G RLS N L+ + +Y+E+FRNIPPL+ IFF Y Sbjct: 91 IVGLLNTLLVSALCIVFASVLGFFIGLARLSDNWLLRKLSTIYIEIFRNIPPLLQIFFWY 150 Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPT 180 +VL LP P ++ FL+NRGL P+ Sbjct: 151 FAVLRNLPGPRQTVSAFDLAFLSNRGLYIPS 181 >gi|302872378|ref|YP_003841014.1| polar amino acid ABC transporter, inner membrane subunit [Caldicellulosiruptor obsidiansis OB47] gi|302575237|gb|ADL43028.1| polar amino acid ABC transporter, inner membrane subunit [Caldicellulosiruptor obsidiansis OB47] Length = 220 Score = 97.4 bits (241), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 67/225 (29%), Positives = 115/225 (51%), Gaps = 32/225 (14%) Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSR--------HFHEKTGKALPLLYISTFLIFGL 232 +T++ A + G+V +LF R+S+ F+ + PLL F+ +GL Sbjct: 19 VTIELTAIAVTIGLIFGLVAALF--RISKIKLLNYIGSFYVWLFRGTPLLLQIFFIYYGL 76 Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292 P +V P L P F++ IAL + A+ AEI+R+ ++++ Sbjct: 77 PKIV------------PAL----------TLPAFLAGAIALIINSGAYTAEIIRAAILSI 114 Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352 RGQ EAA ALG+T+ + R V++PQ + +IPP+ ++++ LLK+SSL +G +L+ Sbjct: 115 DRGQYEAAKALGMTYIQTMRYVIIPQTYKRLIPPIGNEFIALLKDSSLVSTIGMVELMRA 174 Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 +QTG+ EI L + IYL+L+ + N L ++ E+ Sbjct: 175 AQLKASQTGRDAEIYLAALVIYLALTTIFTTIFNWLEKRLGKYEQ 219 >gi|257887162|ref|ZP_05666815.1| amino acid ABC transporter [Enterococcus faecium 1,141,733] gi|257898269|ref|ZP_05677922.1| amino acid ABC transporter [Enterococcus faecium Com15] gi|257823216|gb|EEV50148.1| amino acid ABC transporter [Enterococcus faecium 1,141,733] gi|257836181|gb|EEV61255.1| amino acid ABC transporter [Enterococcus faecium Com15] Length = 535 Score = 97.4 bits (241), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 63/209 (30%), Positives = 111/209 (53%), Gaps = 29/209 (13%) Query: 190 FVFSFVLGIVLSLF------ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243 F + V+G++ LF A R + + +P++ ++ F+ FGLP +V Sbjct: 349 FALAIVIGVIFGLFSVAPIRALRTVASIYVDIIRGIPMMVLAFFIFFGLPGIV------- 401 Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 G T+ P+F++ I L+ +A+IAEIVR G+ AVP GQMEA+ +L Sbjct: 402 ---------------GFTI-PDFIAGVITLTLNASAYIAEIVRGGINAVPVGQMEASRSL 445 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363 GL++ + + ++LPQA+R +IP +Q++ LK++++ A+G +L+ G I+ +T Q+ Sbjct: 446 GLSYNRTMQKIILPQAIRIMIPSFVNQFVISLKDTTIISAIGVVELLQTGKIIVARTTQS 505 Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392 + LI +YL L + L K+ Sbjct: 506 TYVYLIIAIMYLILITALTKLAKVLEKKV 534 >gi|77456604|ref|YP_346109.1| amino acid ABC transporter permease [Pseudomonas fluorescens Pf0-1] gi|77380607|gb|ABA72120.1| amino acid ABC transporter membrane protein, PAAT family [Pseudomonas fluorescens Pf0-1] Length = 319 Score = 97.4 bits (241), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 70/207 (33%), Positives = 117/207 (56%), Gaps = 17/207 (8%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 V S VLG+++ L AT L R T + L +Y+ L+ G P LV I + Y Sbjct: 129 VVSGVLGLLIGL-ATGLCRLSSNPTLRDLSTIYVE--LVRGTPLLVQIFIFY-------- 177 Query: 251 LGQFNFIGG-STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309 FIG +S EF + ALS +T A++AEI+RSG+ ++ RGQ EAA +LGL+ + Sbjct: 178 ----FFIGTVMNLSREFAGI-AALSLFTGAYVAEIIRSGVQSIARGQNEAARSLGLSAGQ 232 Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369 + R V+LPQA + ++PPL Q+++L+K++SL + +L+ G +I + EI+ Sbjct: 233 SMRHVVLPQAFKRVLPPLAGQFISLVKDTSLVSVIAITELLKSGREVITTSFSPFEILFC 292 Query: 370 WMFIYLSLSIMIALFMNRLNAKIALKE 396 +YL +++ ++ +RL ++A + Sbjct: 293 VAGLYLLINLPLSKIASRLERRLAQSD 319 Score = 42.0 bits (97), Expect = 0.17, Method: Compositional matrix adjust. Identities = 28/97 (28%), Positives = 46/97 (47%) Query: 53 EKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGT 112 ++ +L++ L G ++ +G V + A +L G T WL+ + +IG Sbjct: 81 DEQHLTVDENSLQFAQGDDVAEGDVVGVTRHWAAGPLLWGLWTTLWLSVVSGVLGLLIGL 140 Query: 113 LVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 G RLS+N + + +YVE+ R P LV IF Y Sbjct: 141 ATGLCRLSSNPTLRDLSTIYVELVRGTPLLVQIFIFY 177 >gi|324992737|gb|EGC24657.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK405] Length = 729 Score = 97.4 bits (241), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 62/209 (29%), Positives = 110/209 (52%), Gaps = 23/209 (11%) Query: 190 FVFSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243 F + V+GI+ +F+ R + +PL+ ++ F+ +G+P L+ Sbjct: 537 FAIAMVIGIIFGMFSVSPYKPLRWIAEIFVDVIRGIPLMIVAAFIFWGIPNLI------- 589 Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 + + GQ + I F++ IALS A+IAEIVR G+ AVP GQMEA+ +L Sbjct: 590 ----ESMTGQQSPINA------FVAGTIALSLNAGAYIAEIVRGGIQAVPVGQMEASRSL 639 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363 G+++ K R ++LPQA + ++P +Q++ LK++++ A+G A+L G II + Q+ Sbjct: 640 GISYSKTMRKIILPQATKIMLPNFVNQFVIALKDTTIVSAIGLAELFKTGKDIIARNYQS 699 Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392 + I +YL + ++ RL +I Sbjct: 700 FRMYAILAVLYLIIITLLTRLAKRLEKRI 728 >gi|148989263|ref|ZP_01820643.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae SP6-BS73] gi|147925241|gb|EDK76320.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae SP6-BS73] Length = 721 Score = 97.4 bits (241), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 62/210 (29%), Positives = 113/210 (53%), Gaps = 23/210 (10%) Query: 190 FVFSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243 F + V+GI+ +F+ R+ + +PL+ ++ F+ +G+P Sbjct: 529 FAIAIVIGIIFGMFSVSPYKSLRVISEIFVDVIRGIPLMILAAFIFWGIP---------- 578 Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 +F + + GQ + I +F++ IALS AA+IAEIVR G+ AVP GQMEA+ +L Sbjct: 579 -NFIESITGQQSPIN------DFVAGTIALSLNAAAYIAEIVRGGIQAVPVGQMEASRSL 631 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363 G+++ K R ++LPQA + ++P +Q++ LK++++ A+G +L G II + Q+ Sbjct: 632 GISYGKTMRKIILPQATKLMLPNFVNQFVIALKDTTIVSAIGLVELFQTGKIIIARNYQS 691 Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIA 393 ++ I YL + ++ RL +I+ Sbjct: 692 FKMYAILAIFYLVIITLLTRLAKRLEKRIS 721 >gi|293377691|ref|ZP_06623880.1| ABC transporter, permease protein [Enterococcus faecium PC4.1] gi|293571887|ref|ZP_06682903.1| glutamine ABC transporter, permease/substrate-binding protein [Enterococcus faecium E980] gi|291608141|gb|EFF37447.1| glutamine ABC transporter, permease/substrate-binding protein [Enterococcus faecium E980] gi|292643691|gb|EFF61812.1| ABC transporter, permease protein [Enterococcus faecium PC4.1] Length = 500 Score = 97.4 bits (241), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 63/209 (30%), Positives = 111/209 (53%), Gaps = 29/209 (13%) Query: 190 FVFSFVLGIVLSLF------ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243 F + V+G++ LF A R + + +P++ ++ F+ FGLP +V Sbjct: 314 FALAIVIGVIFGLFSVAPIRALRTVASIYVDIIRGIPMMVLAFFIFFGLPGIV------- 366 Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 G T+ P+F++ I L+ +A+IAEIVR G+ AVP GQMEA+ +L Sbjct: 367 ---------------GFTI-PDFIAGVITLTLNASAYIAEIVRGGINAVPVGQMEASRSL 410 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363 GL++ + + ++LPQA+R +IP +Q++ LK++++ A+G +L+ G I+ +T Q+ Sbjct: 411 GLSYNRTMQKIILPQAIRIMIPSFVNQFVISLKDTTIISAIGVVELLQTGKIIVARTTQS 470 Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392 + LI +YL L + L K+ Sbjct: 471 TYVYLIIAIMYLILITALTKLAKVLEKKV 499 >gi|315221701|ref|ZP_07863617.1| ABC transporter, permease protein [Streptococcus anginosus F0211] gi|315189188|gb|EFU22887.1| ABC transporter, permease protein [Streptococcus anginosus F0211] Length = 727 Score = 97.4 bits (241), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 61/209 (29%), Positives = 109/209 (52%), Gaps = 23/209 (11%) Query: 190 FVFSFVLGIVLSLF------ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243 F + V+GI+ +F A R+ + +PL+ ++ F+ +G+P L+ +Q Sbjct: 535 FAIAMVIGIIFGMFSVSPVKALRVISEIFVDVIRGIPLMILAAFIFWGIPNLIESMTGHQ 594 Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 + +F+ G+ IALS A+IAEIVR G+ AVP GQMEA+ +L Sbjct: 595 SPIN-------DFVAGT----------IALSLNAGAYIAEIVRGGIQAVPAGQMEASRSL 637 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363 G+++ K R ++LPQA + ++P +Q++ LK++++ A+G +L G II + Q+ Sbjct: 638 GISYSKTMRKIILPQATKIMLPNFVNQFVIALKDTTIVSAIGLVELFQTGKIIIARNYQS 697 Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392 ++ I YL + ++ RL +I Sbjct: 698 FKMYAILAVFYLIIITLLTRLAKRLEKRI 726 >gi|307709473|ref|ZP_07645930.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus mitis SK564] gi|307619787|gb|EFN98906.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus mitis SK564] Length = 721 Score = 97.4 bits (241), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 62/209 (29%), Positives = 112/209 (53%), Gaps = 23/209 (11%) Query: 190 FVFSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243 F + V+GI+ +F+ R+ + +PL+ ++ F+ +G+P Sbjct: 529 FAIAIVIGIIFGMFSVSPYKSLRVISEIFVDVIRGIPLMILAAFIFWGIP---------- 578 Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 +F + + GQ + I +F++ IALS AA+IAEIVR G+ AVP GQMEA+ +L Sbjct: 579 -NFIESITGQQSPIN------DFVAGTIALSLNAAAYIAEIVRGGIQAVPVGQMEASRSL 631 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363 G+++ K R ++LPQA + ++P +Q++ LK++++ A+G +L G II + Q+ Sbjct: 632 GISYGKTMRKIILPQATKLMLPNFVNQFVIALKDTTIVSAIGLVELFQTGKIIIARNYQS 691 Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392 ++ I YL + ++ RL +I Sbjct: 692 FKMYAILAIFYLVIITLLTRLAKRLEKRI 720 >gi|269926020|ref|YP_003322643.1| polar amino acid ABC transporter, inner membrane subunit [Thermobaculum terrenum ATCC BAA-798] gi|269789680|gb|ACZ41821.1| polar amino acid ABC transporter, inner membrane subunit [Thermobaculum terrenum ATCC BAA-798] Length = 246 Score = 97.4 bits (241), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 76/219 (34%), Positives = 119/219 (54%), Gaps = 19/219 (8%) Query: 179 PTLTMDTNAKIF--VFSFVLGIVLSLFATRLSRHFHEKTGKALPLL-YISTFLIF---GL 232 P++ IF V S +LGI+L L A L R H + +P+ +IS F I+ G Sbjct: 15 PSIVRGAELTIFLSVVSQLLGILLGLVAA-LGRISHSR----IPVFRWISGFYIWLFRGT 69 Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292 P LV I Y F P L V PE S IALS A++AEI+R+G+++V Sbjct: 70 PLLVQIIFVY---FAIPQL-----TNQRVVIPEVPSAIIALSLNEGAYMAEIIRAGILSV 121 Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352 GQMEAA++LG+T A R ++LPQA+R IIPP ++++++LKN+SL + +L+ Sbjct: 122 EGGQMEAALSLGMTRWLAMRRIILPQAIRIIIPPTGNEFISMLKNTSLVAVISAHELLFA 181 Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 I + T + E++ I YL+++ + + +L + Sbjct: 182 TQEIYSATFRYFELLTIASLWYLAMTTVASYLQGKLERR 220 >gi|324994617|gb|EGC26530.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK678] gi|327462473|gb|EGF08797.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK1] gi|327474328|gb|EGF19734.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK408] gi|327489715|gb|EGF21505.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK1058] Length = 729 Score = 97.4 bits (241), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 62/209 (29%), Positives = 110/209 (52%), Gaps = 23/209 (11%) Query: 190 FVFSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243 F + V+GI+ +F+ R + +PL+ ++ F+ +G+P L+ Sbjct: 537 FAIAMVIGIIFGMFSVSPYKPLRWIAEIFVDVIRGIPLMIVAAFIFWGIPNLI------- 589 Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 + + GQ + I F++ IALS A+IAEIVR G+ AVP GQMEA+ +L Sbjct: 590 ----ESMTGQQSPINA------FVAGTIALSLNAGAYIAEIVRGGIQAVPVGQMEASRSL 639 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363 G+++ K R ++LPQA + ++P +Q++ LK++++ A+G A+L G II + Q+ Sbjct: 640 GISYSKTMRKIILPQATKIMLPNFVNQFVIALKDTTIVSAIGLAELFKTGKDIIARNYQS 699 Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392 + I +YL + ++ RL +I Sbjct: 700 FRMYAILAVLYLIIITLLTRLAKRLEKRI 728 >gi|260771024|ref|ZP_05879952.1| putative amino acid ABC transporter permease protein [Vibrio furnissii CIP 102972] gi|260613913|gb|EEX39104.1| putative amino acid ABC transporter permease protein [Vibrio furnissii CIP 102972] Length = 186 Score = 97.4 bits (241), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 64/191 (33%), Positives = 102/191 (53%), Gaps = 23/191 (12%) Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265 R + + + +A+PLL + ++ +GLP L ++L HF V+ Sbjct: 19 RQANRVYVEVVRAIPLLVLLLWIYYGLPVLFDLSLN---HFTAGVM-------------- 61 Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 ALS +AF+AE+ R G+ A+ RGQ EAA ALGL + RLV+LPQA+R I+P Sbjct: 62 ------ALSLAESAFMAEVFRGGIQAIDRGQHEAAQALGLRDWQKMRLVILPQALRHILP 115 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PL +Q++ +LK SSL +G +DL ++ +EI + YL L ++++ + Sbjct: 116 PLGNQFIYILKMSSLVSVIGLSDLTRRANELVVTEYLPLEIYTFLVLEYLILILLVSYGV 175 Query: 386 NRLNAKIALKE 396 RL K+AL + Sbjct: 176 RRLEKKLALPQ 186 >gi|261344517|ref|ZP_05972161.1| glutamate/aspartate ABC transporter, permease protein [Providencia rustigianii DSM 4541] gi|282567429|gb|EFB72964.1| glutamate/aspartate ABC transporter, permease protein [Providencia rustigianii DSM 4541] Length = 250 Score = 97.4 bits (241), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 48/98 (48%), Positives = 71/98 (72%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 EF++ ++ L+ YT FIAE VRSG+ V +GQ +AA ALGLT +A +LV+LPQA++ + Sbjct: 118 EFLAGFVGLTLYTVPFIAEEVRSGIRGVRQGQKQAAFALGLTSWQAMKLVVLPQAVKIAL 177 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362 PPL QY+N++KNSSL +A+G A+L V + +Q+ Q Sbjct: 178 PPLLGQYMNVVKNSSLTMAIGVAELSYVSRQVDSQSLQ 215 Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 51/180 (28%), Positives = 80/180 (44%), Gaps = 20/180 (11%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151 GF+ T W++ +I AT++G +V + R S + W Y+ +FRN P LV +FF Y + Sbjct: 27 GFLLTVWISVCTIIAATLLGFIVASARDSQIAPLRWFVSAYISIFRNTPLLVQLFFWYFA 86 Query: 152 VLSVLPIP-------DHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFA 204 +LP H + FG+ L+ SF L ++ F+ V S Sbjct: 87 SGEILPASMMEWLNTPHEVHF-FGVMLSWP--SFEFLAGFVGLTLYTVPFIAEEVRS--G 141 Query: 205 TRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQF-NFIGGSTVS 263 R R ++ AL L + LP V IAL P+LGQ+ N + S+++ Sbjct: 142 IRGVRQGQKQAAFALGLTSWQAMKLVVLPQAVKIAL-------PPLLGQYMNVVKNSSLT 194 >gi|226310805|ref|YP_002770699.1| glutamine ABC transporter permease protein [Brevibacillus brevis NBRC 100599] gi|226093753|dbj|BAH42195.1| glutamine ABC transporter permease protein [Brevibacillus brevis NBRC 100599] Length = 217 Score = 97.1 bits (240), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 66/212 (31%), Positives = 115/212 (54%), Gaps = 18/212 (8%) Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALK 241 T+ + V SFVLG + ++F R PL +I+T I + + LI + Sbjct: 21 TLQASLLALVGSFVLGTLFAIFRISPIR----------PLKWIATAYIEFVRNIPLILVV 70 Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301 + P +G + F++ + L+ YTAAFIAE +R+G+ A+P+GQ EAA Sbjct: 71 FLFFVGLPAIG--------IILEPFIAGTLGLTVYTAAFIAETIRAGIQAIPKGQTEAAR 122 Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361 + GLT+ + R ++LPQA++ +IPP+ +Q++NL+KNSS+ + DL+ G I T Sbjct: 123 SSGLTYGQTMRYIILPQAIKVVIPPMGNQFINLVKNSSVLGVIAGLDLMYYGDLISADTF 182 Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393 ++ + YL L++ ++ F++ L ++A Sbjct: 183 VTFDVYIFVAVFYLILTLPLSAFVSYLERRLA 214 Score = 40.8 bits (94), Expect = 0.35, Method: Compositional matrix adjust. Identities = 20/60 (33%), Positives = 34/60 (56%) Query: 90 LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 L GF NT + ++ + ++GTL R+S + + WI Y+E RNIP ++V+F + Sbjct: 15 LKGFWNTLQASLLALVGSFVLGTLFAIFRISPIRPLKWIATAYIEFVRNIPLILVVFLFF 74 >gi|328946378|gb|EGG40519.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK1087] Length = 729 Score = 97.1 bits (240), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 62/209 (29%), Positives = 110/209 (52%), Gaps = 23/209 (11%) Query: 190 FVFSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243 F + V+GI+ +F+ R + +PL+ ++ F+ +G+P L+ Sbjct: 537 FAIAMVIGIIFGMFSVSPYKPLRWIAEIFVDVIRGIPLMIVAAFIFWGIPNLI------- 589 Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 + + GQ + I F++ IALS A+IAEIVR G+ AVP GQMEA+ +L Sbjct: 590 ----ESMTGQQSPINA------FVAGTIALSLNAGAYIAEIVRGGIQAVPVGQMEASRSL 639 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363 G+++ K R ++LPQA + ++P +Q++ LK++++ A+G A+L G II + Q+ Sbjct: 640 GISYSKTMRKIILPQATKIMLPNFVNQFVIALKDTTIVSAIGLAELFKTGKDIIARNYQS 699 Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392 + I +YL + ++ RL +I Sbjct: 700 FRMYAILAVLYLIIITLLTRLAKRLEKRI 728 >gi|257882917|ref|ZP_05662570.1| amino acid ABC transporter [Enterococcus faecium 1,231,502] gi|257884373|ref|ZP_05664026.1| amino acid ABC transporter [Enterococcus faecium 1,231,501] gi|257889304|ref|ZP_05668957.1| amino acid ABC transporter [Enterococcus faecium 1,231,410] gi|260560085|ref|ZP_05832263.1| amino acid ABC transporter [Enterococcus faecium C68] gi|261207427|ref|ZP_05922113.1| amino acid ABC transporter [Enterococcus faecium TC 6] gi|289566473|ref|ZP_06446898.1| amino acid ABC transporter [Enterococcus faecium D344SRF] gi|257818575|gb|EEV45903.1| amino acid ABC transporter [Enterococcus faecium 1,231,502] gi|257820211|gb|EEV47359.1| amino acid ABC transporter [Enterococcus faecium 1,231,501] gi|257825664|gb|EEV52290.1| amino acid ABC transporter [Enterococcus faecium 1,231,410] gi|260073920|gb|EEW62244.1| amino acid ABC transporter [Enterococcus faecium C68] gi|260078318|gb|EEW66023.1| amino acid ABC transporter [Enterococcus faecium TC 6] gi|289161738|gb|EFD09613.1| amino acid ABC transporter [Enterococcus faecium D344SRF] Length = 535 Score = 97.1 bits (240), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 63/209 (30%), Positives = 111/209 (53%), Gaps = 29/209 (13%) Query: 190 FVFSFVLGIVLSLF------ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243 F + V+G++ LF A R + + +P++ ++ F+ FGLP +V Sbjct: 349 FALAIVIGVIFGLFSVAPIRALRTIASIYVDIIRGIPMMVLAFFIFFGLPGIV------- 401 Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 G T+ P+F++ I L+ +A+IAEIVR G+ AVP GQMEA+ +L Sbjct: 402 ---------------GFTI-PDFLAGVITLTLNASAYIAEIVRGGINAVPVGQMEASRSL 445 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363 GL++ + + ++LPQA+R +IP +Q++ LK++++ A+G +L+ G I+ +T Q+ Sbjct: 446 GLSYNRTMQKIILPQAIRIMIPSFVNQFVISLKDTTIISAIGVVELLQTGKIIVARTTQS 505 Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392 + LI +YL L + L K+ Sbjct: 506 TYVYLIIAIMYLILITALTKLAKVLEKKV 534 >gi|258406609|ref|YP_003199351.1| polar amino acid ABC transporter, inner membrane subunit [Desulfohalobium retbaense DSM 5692] gi|257798836|gb|ACV69773.1| polar amino acid ABC transporter, inner membrane subunit [Desulfohalobium retbaense DSM 5692] Length = 335 Score = 97.1 bits (240), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 71/206 (34%), Positives = 118/206 (57%), Gaps = 9/206 (4%) Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL--H 245 K+ V + +LGIVL + T LSR + + YI +I G P LV I L Y + Sbjct: 135 KVSVVAIILGIVLGVL-TGLSRISSNPALRWSAITYIE--IIRGSPLLVQIFLWYFVIGT 191 Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305 +L Q N +G +SP + + I+L+ +T A++AEIVR+G+ +V RGQMEAA +LG+ Sbjct: 192 LVNSILAQ-NGLG--QISPLWFGI-ISLAVFTGAYVAEIVRAGIQSVSRGQMEAARSLGM 247 Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365 T+ ++ R V+LPQA + I+P L Q+++L+K+SSL + +L ++ + Q E Sbjct: 248 TYTQSMRKVILPQAFKRILPALAGQFISLIKDSSLLGVISVRELTKATREVVTSSLQPFE 307 Query: 366 IILIWMFIYLSLSIMIALFMNRLNAK 391 + + +YL L+ ++L + + K Sbjct: 308 LWITCAVLYLLLTFTLSLVVQYIERK 333 Score = 36.2 bits (82), Expect = 8.2, Method: Compositional matrix adjust. Identities = 20/61 (32%), Positives = 31/61 (50%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G T ++ +I ++G L G R+S+N + W Y+E+ R P LV IF Sbjct: 126 LLQGLWITLKVSVVAIILGIVLGVLTGLSRISSNPALRWSAITYIEIIRGSPLLVQIFLW 185 Query: 149 Y 149 Y Sbjct: 186 Y 186 >gi|325694667|gb|EGD36574.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK150] Length = 729 Score = 97.1 bits (240), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 62/209 (29%), Positives = 110/209 (52%), Gaps = 23/209 (11%) Query: 190 FVFSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243 F + V+GI+ +F+ R + +PL+ ++ F+ +G+P L+ Sbjct: 537 FAIAMVIGIIFGMFSVSPYKPLRWIAEIFVDVIRGIPLMIVAAFIFWGIPNLI------- 589 Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 + + GQ + I F++ IALS A+IAEIVR G+ AVP GQMEA+ +L Sbjct: 590 ----ESMTGQQSPINA------FVAGTIALSLNAGAYIAEIVRGGIQAVPVGQMEASRSL 639 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363 G+++ K R ++LPQA + ++P +Q++ LK++++ A+G A+L G II + Q+ Sbjct: 640 GISYSKTMRKIILPQATKIMLPNFVNQFVIALKDTTIVSAIGLAELFKTGKDIIARNYQS 699 Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392 + I +YL + ++ RL +I Sbjct: 700 FRMYAILAVLYLIIITLLTRLAKRLEKRI 728 >gi|325687630|gb|EGD29651.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK72] Length = 729 Score = 97.1 bits (240), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 62/209 (29%), Positives = 110/209 (52%), Gaps = 23/209 (11%) Query: 190 FVFSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243 F + V+GI+ +F+ R + +PL+ ++ F+ +G+P L+ Sbjct: 537 FAIAMVIGIIFGMFSVSPYKPLRWIAEIFVDVIRGIPLMIVAAFIFWGIPNLI------- 589 Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 + + GQ + I F++ IALS A+IAEIVR G+ AVP GQMEA+ +L Sbjct: 590 ----ESMTGQQSPINA------FVAGTIALSLNAGAYIAEIVRGGIQAVPVGQMEASRSL 639 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363 G+++ K R ++LPQA + ++P +Q++ LK++++ A+G A+L G II + Q+ Sbjct: 640 GISYSKTMRKIILPQATKIMLPNFVNQFVIALKDTTIVSAIGLAELFKTGKDIIARNYQS 699 Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392 + I +YL + ++ RL +I Sbjct: 700 FRMYAILAVLYLIIITLLTRLAKRLEKRI 728 >gi|298254350|ref|ZP_06977936.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae str. Canada MDR_19A] Length = 721 Score = 97.1 bits (240), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 62/209 (29%), Positives = 112/209 (53%), Gaps = 23/209 (11%) Query: 190 FVFSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243 F + V+GI+ +F+ R+ + +PL+ ++ F+ +G+P Sbjct: 529 FAIAIVIGIIFGMFSVSPYKSLRVISEIFVDVIRGIPLMILAAFIFWGIP---------- 578 Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 +F + + GQ + I +F++ IALS AA+IAEIVR G+ AVP GQMEA+ +L Sbjct: 579 -NFIESITGQQSPIN------DFVAGTIALSLNAAAYIAEIVRGGIQAVPVGQMEASRSL 631 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363 G+++ K R ++LPQA + ++P +Q++ LK++++ A+G +L G II + Q+ Sbjct: 632 GISYGKTMRKIILPQATKLMLPNFVNQFVIALKDTTIVSAIGLVELFQTGKIIIARNYQS 691 Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392 ++ I YL + ++ RL +I Sbjct: 692 FKMYAILAIFYLVIITLLTRLAKRLEKRI 720 >gi|182684032|ref|YP_001835779.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae CGSP14] gi|303254264|ref|ZP_07340373.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae BS455] gi|303258876|ref|ZP_07344855.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae SP-BS293] gi|303261559|ref|ZP_07347506.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae SP14-BS292] gi|303264230|ref|ZP_07350150.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae BS397] gi|303266139|ref|ZP_07352032.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae BS457] gi|303268134|ref|ZP_07353934.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae BS458] gi|182629366|gb|ACB90314.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae CGSP14] gi|301801904|emb|CBW34628.1| putative glutamine ABC transporter, glutamine-binding protein/permease protein [Streptococcus pneumoniae INV200] gi|302598758|gb|EFL65795.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae BS455] gi|302637139|gb|EFL67627.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae SP14-BS292] gi|302639819|gb|EFL70275.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae SP-BS293] gi|302642351|gb|EFL72698.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae BS458] gi|302644309|gb|EFL74563.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae BS457] gi|302646042|gb|EFL76269.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae BS397] Length = 721 Score = 97.1 bits (240), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 62/209 (29%), Positives = 112/209 (53%), Gaps = 23/209 (11%) Query: 190 FVFSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243 F + V+GI+ +F+ R+ + +PL+ ++ F+ +G+P Sbjct: 529 FAIAIVIGIIFGMFSVSPYKSLRVISEIFVDVIRGIPLMILAAFIFWGIP---------- 578 Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 +F + + GQ + I +F++ IALS AA+IAEIVR G+ AVP GQMEA+ +L Sbjct: 579 -NFIESITGQQSPIN------DFVAGTIALSLNAAAYIAEIVRGGIQAVPVGQMEASRSL 631 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363 G+++ K R ++LPQA + ++P +Q++ LK++++ A+G +L G II + Q+ Sbjct: 632 GISYGKTMRKIILPQATKLMLPNFVNQFVIALKDTTIVSAIGLVELFQTGKIIIARNYQS 691 Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392 ++ I YL + ++ RL +I Sbjct: 692 FKMYAILAIFYLVIITLLTRLAKRLEKRI 720 >gi|169834415|ref|YP_001694671.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae Hungary19A-6] gi|168996917|gb|ACA37529.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae Hungary19A-6] Length = 721 Score = 97.1 bits (240), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 62/209 (29%), Positives = 112/209 (53%), Gaps = 23/209 (11%) Query: 190 FVFSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243 F + V+GI+ +F+ R+ + +PL+ ++ F+ +G+P Sbjct: 529 FAIAIVIGIIFGMFSVSPYKSLRVISEIFVDVIRGIPLMILAAFIFWGIP---------- 578 Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 +F + + GQ + I +F++ IALS AA+IAEIVR G+ AVP GQMEA+ +L Sbjct: 579 -NFIESITGQQSPIN------DFVAGTIALSLNAAAYIAEIVRGGIQAVPVGQMEASRSL 631 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363 G+++ K R ++LPQA + ++P +Q++ LK++++ A+G +L G II + Q+ Sbjct: 632 GISYGKTMRKIILPQATKLMLPNFVNQFVIALKDTTIVSAIGLVELFQTGKIIIARNYQS 691 Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392 ++ I YL + ++ RL +I Sbjct: 692 FKMYAILAIFYLVIITLLTRLAKRLEKRI 720 >gi|148985136|ref|ZP_01818375.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae SP3-BS71] gi|148998673|ref|ZP_01826112.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae SP11-BS70] gi|149019232|ref|ZP_01834594.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae SP23-BS72] gi|168486561|ref|ZP_02711069.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae CDC1087-00] gi|168575696|ref|ZP_02721611.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae MLV-016] gi|221231935|ref|YP_002511087.1| putative glutamine ABC transporter,glutamine-binding protein/permease protein [Streptococcus pneumoniae ATCC 700669] gi|225854706|ref|YP_002736218.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae JJA] gi|225860926|ref|YP_002742435.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae Taiwan19F-14] gi|298229894|ref|ZP_06963575.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae str. Canada MDR_19F] gi|298502762|ref|YP_003724702.1| amino acid ABC superfamily transporter ATP-binding protein/permease [Streptococcus pneumoniae TCH8431/19A] gi|307067889|ref|YP_003876855.1| amino acid ABC transporter/signal transduction system periplasmic domain-containing protein [Streptococcus pneumoniae AP200] gi|147755510|gb|EDK62558.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae SP11-BS70] gi|147922581|gb|EDK73699.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae SP3-BS71] gi|147931102|gb|EDK82081.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae SP23-BS72] gi|183570457|gb|EDT90985.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae CDC1087-00] gi|183578152|gb|EDT98680.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae MLV-016] gi|220674395|emb|CAR68945.1| putative glutamine ABC transporter,glutamine-binding protein/permease protein [Streptococcus pneumoniae ATCC 700669] gi|225723631|gb|ACO19484.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae JJA] gi|225727804|gb|ACO23655.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae Taiwan19F-14] gi|298238357|gb|ADI69488.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein/permease protein [Streptococcus pneumoniae TCH8431/19A] gi|301794323|emb|CBW36748.1| putative glutamine ABC transporter, glutamine-binding protein/permease protein [Streptococcus pneumoniae INV104] gi|301800161|emb|CBW32766.1| putative glutamine ABC transporter, glutamine-binding protein/permease protein [Streptococcus pneumoniae OXC141] gi|306409426|gb|ADM84853.1| ABC-type amino acid transport/signal transduction systems, periplasmic component/domain protein [Streptococcus pneumoniae AP200] gi|327389476|gb|EGE87821.1| amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Streptococcus pneumoniae GA04375] Length = 721 Score = 97.1 bits (240), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 62/209 (29%), Positives = 112/209 (53%), Gaps = 23/209 (11%) Query: 190 FVFSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243 F + V+GI+ +F+ R+ + +PL+ ++ F+ +G+P Sbjct: 529 FAIAIVIGIIFGMFSVSPYKSLRVISEIFVDVIRGIPLMILAAFIFWGIP---------- 578 Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 +F + + GQ + I +F++ IALS AA+IAEIVR G+ AVP GQMEA+ +L Sbjct: 579 -NFIESITGQQSPIN------DFVAGTIALSLNAAAYIAEIVRGGIQAVPVGQMEASRSL 631 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363 G+++ K R ++LPQA + ++P +Q++ LK++++ A+G +L G II + Q+ Sbjct: 632 GISYGKTMRKIILPQATKLMLPNFVNQFVIALKDTTIVSAIGLVELFQTGKIIIARNYQS 691 Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392 ++ I YL + ++ RL +I Sbjct: 692 FKMYAILAIFYLVIITLLTRLAKRLEKRI 720 >gi|241889480|ref|ZP_04776779.1| arginine transport system permease protein ArtQ [Gemella haemolysans ATCC 10379] gi|241863787|gb|EER68170.1| arginine transport system permease protein ArtQ [Gemella haemolysans ATCC 10379] Length = 213 Score = 97.1 bits (240), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 62/183 (33%), Positives = 109/183 (59%), Gaps = 11/183 (6%) Query: 216 GKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG------GSTVSPEFMSL 269 G + L ISTF + V+ A+ ++ + P+L Q I G + +P FMS Sbjct: 34 GIVVCLAKISTFKVLN----VIAAIYVEIIRNTPILVQIMIIYFALPEIGISFTP-FMSA 88 Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329 IALS + A+++EI RSG++A+ +GQMEA +LGL++ + +L++LPQA+++ +P L + Sbjct: 89 IIALSINSGAYVSEIFRSGILAIDKGQMEAGRSLGLSYFQTMKLIILPQALKNSLPALGN 148 Query: 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 ++++L+K SS+ VG AD++ T+ N T Q L+ IY ++ +++L + RL Sbjct: 149 EFISLVKESSIVYFVGVADIMFTANTVKNATYQTFGPYLVAAAIYFIITSILSLLVKRLE 208 Query: 390 AKI 392 K+ Sbjct: 209 KKL 211 Score = 36.2 bits (82), Expect = 8.8, Method: Compositional matrix adjust. Identities = 21/66 (31%), Positives = 35/66 (53%) Query: 84 SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143 +Y T L V T ++ ++ I+G +V ++S K++ I +YVE+ RN P LV Sbjct: 7 NYYTMYLEATVTTLKVSLIALLVGLILGIVVCLAKISTFKVLNVIAAIYVEIIRNTPILV 66 Query: 144 VIFFLY 149 I +Y Sbjct: 67 QIMIIY 72 >gi|327470838|gb|EGF16294.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK330] Length = 729 Score = 97.1 bits (240), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 62/209 (29%), Positives = 110/209 (52%), Gaps = 23/209 (11%) Query: 190 FVFSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243 F + V+GI+ +F+ R + +PL+ ++ F+ +G+P L+ Sbjct: 537 FAIAMVIGIIFGMFSVSPYKPLRWIAEIFVDVIRGIPLMIVAAFIFWGIPNLI------- 589 Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 + + GQ + I F++ IALS A+IAEIVR G+ AVP GQMEA+ +L Sbjct: 590 ----ESMTGQQSPINA------FVAGTIALSLNAGAYIAEIVRGGIQAVPVGQMEASRSL 639 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363 G+++ K R ++LPQA + ++P +Q++ LK++++ A+G A+L G II + Q+ Sbjct: 640 GISYSKTMRKIILPQATKIMLPNFVNQFVIALKDTTIVSAIGLAELFKTGKDIIARNYQS 699 Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392 + I +YL + ++ RL +I Sbjct: 700 FRMYAILAVLYLIIITLLTRLAKRLEKRI 728 >gi|324990984|gb|EGC22918.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK353] Length = 729 Score = 97.1 bits (240), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 62/209 (29%), Positives = 110/209 (52%), Gaps = 23/209 (11%) Query: 190 FVFSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243 F + V+GI+ +F+ R + +PL+ ++ F+ +G+P L+ Sbjct: 537 FAIAMVIGIIFGMFSVSPYKPLRWIAEIFVDVIRGIPLMIVAAFIFWGIPNLI------- 589 Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 + + GQ + I F++ IALS A+IAEIVR G+ AVP GQMEA+ +L Sbjct: 590 ----ESMTGQQSPINA------FVAGTIALSLNAGAYIAEIVRGGIQAVPVGQMEASRSL 639 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363 G+++ K R ++LPQA + ++P +Q++ LK++++ A+G A+L G II + Q+ Sbjct: 640 GISYSKTMRKIILPQATKIMLPNFVNQFVIALKDTTIVSAIGLAELFKTGKDIIARNYQS 699 Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392 + I +YL + ++ RL +I Sbjct: 700 FRMYAILAVLYLIIITLLTRLAKRLEKRI 728 >gi|15901102|ref|NP_345706.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae TIGR4] gi|111658436|ref|ZP_01409115.1| hypothetical protein SpneT_02000407 [Streptococcus pneumoniae TIGR4] gi|116516932|ref|YP_816569.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae D39] gi|149007101|ref|ZP_01830770.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae SP18-BS74] gi|149012291|ref|ZP_01833360.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae SP19-BS75] gi|168493162|ref|ZP_02717305.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae CDC3059-06] gi|225856907|ref|YP_002738418.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae P1031] gi|225859035|ref|YP_002740545.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae 70585] gi|237649941|ref|ZP_04524193.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae CCRI 1974] gi|307127172|ref|YP_003879203.1| amino acid ABC transporter amino acid-binding protein/permeae [Streptococcus pneumoniae 670-6B] gi|14972722|gb|AAK75346.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae TIGR4] gi|116077508|gb|ABJ55228.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae D39] gi|147761405|gb|EDK68371.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae SP18-BS74] gi|147763617|gb|EDK70552.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae SP19-BS75] gi|183576805|gb|EDT97333.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae CDC3059-06] gi|225721475|gb|ACO17329.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae 70585] gi|225725249|gb|ACO21101.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae P1031] gi|306484234|gb|ADM91103.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae 670-6B] gi|332074571|gb|EGI85045.1| amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Streptococcus pneumoniae GA17545] Length = 721 Score = 97.1 bits (240), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 62/209 (29%), Positives = 112/209 (53%), Gaps = 23/209 (11%) Query: 190 FVFSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243 F + V+GI+ +F+ R+ + +PL+ ++ F+ +G+P Sbjct: 529 FAIAIVIGIIFGMFSVSPYKSLRVISEIFVDVIRGIPLMILAAFIFWGIP---------- 578 Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 +F + + GQ + I +F++ IALS AA+IAEIVR G+ AVP GQMEA+ +L Sbjct: 579 -NFIESITGQQSPIN------DFVAGTIALSLNAAAYIAEIVRGGIQAVPVGQMEASRSL 631 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363 G+++ K R ++LPQA + ++P +Q++ LK++++ A+G +L G II + Q+ Sbjct: 632 GISYGKTMRKIILPQATKLMLPNFVNQFVIALKDTTIVSAIGLVELFQTGKIIIARNYQS 691 Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392 ++ I YL + ++ RL +I Sbjct: 692 FKMYAILAIFYLVIITLLTRLAKRLEKRI 720 >gi|328462014|gb|EGF34198.1| glutamine ABC transporter permease [Lactobacillus helveticus MTCC 5463] Length = 175 Score = 97.1 bits (240), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 67/181 (37%), Positives = 106/181 (58%), Gaps = 15/181 (8%) Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273 K GK + +YI+ F +P LV++ + Y L + ++ F G+ I L Sbjct: 8 KFGKIVAKVYIAIFR--NIPLLVIVMIFY-LIVPRYIVKLSGFQAGT----------IGL 54 Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333 + YT+AFIAE VR+G+ ++ GQME A + G+T+ +A R V+LPQAM+ +IPPL +Q++N Sbjct: 55 TLYTSAFIAETVRAGISSISTGQMEGARSNGMTYTQAMRYVILPQAMKIVIPPLGNQFVN 114 Query: 334 LLKNSS-LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 L+KNSS LA GF DL+ I T + I+ ++ YL L++ ++ +M L K+ Sbjct: 115 LVKNSSVLAFVAGF-DLMYQAQLIAFSTFRTIDTYVVVGLFYLILTLPLSYYMRHLEKKL 173 Query: 393 A 393 A Sbjct: 174 A 174 >gi|325695929|gb|EGD37820.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK160] Length = 729 Score = 97.1 bits (240), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 62/209 (29%), Positives = 110/209 (52%), Gaps = 23/209 (11%) Query: 190 FVFSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243 F + V+GI+ +F+ R + +PL+ ++ F+ +G+P L+ Sbjct: 537 FAIAMVIGIIFGMFSVSPYKPLRWIAEIFVDVIRGIPLMIVAAFIFWGIPNLI------- 589 Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 + + GQ + I F++ IALS A+IAEIVR G+ AVP GQMEA+ +L Sbjct: 590 ----ESMTGQQSPINA------FVAGTIALSLNAGAYIAEIVRGGIQAVPVGQMEASRSL 639 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363 G+++ K R ++LPQA + ++P +Q++ LK++++ A+G A+L G II + Q+ Sbjct: 640 GISYSKTMRKIILPQATKIMLPNFVNQFVIALKDTTIVSAIGLAELFKTGKDIIARNYQS 699 Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392 + I +YL + ++ RL +I Sbjct: 700 FRMYAILAVLYLIIITLLTRLAKRLEKRI 728 >gi|307706697|ref|ZP_07643503.1| bacterial extracellular solute-binding protein, family 3 [Streptococcus mitis SK321] gi|307617941|gb|EFN97102.1| bacterial extracellular solute-binding protein, family 3 [Streptococcus mitis SK321] Length = 721 Score = 97.1 bits (240), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 62/209 (29%), Positives = 112/209 (53%), Gaps = 23/209 (11%) Query: 190 FVFSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243 F + V+GI+ +F+ R+ + +PL+ ++ F+ +G+P Sbjct: 529 FAIAIVIGIIFGMFSVSPYKSLRVISEIFVDVIRGIPLMILAAFIFWGIP---------- 578 Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 +F + + GQ + I +F++ IALS AA+IAEIVR G+ AVP GQMEA+ +L Sbjct: 579 -NFIESITGQQSPIN------DFVAGTIALSLNAAAYIAEIVRGGIQAVPVGQMEASRSL 631 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363 G+++ K R ++LPQA + ++P +Q++ LK++++ A+G +L G II + Q+ Sbjct: 632 GISYGKTMRKIILPQATKLMLPNFVNQFVIALKDTTIVSAIGLVELFQTGKIIIARNYQS 691 Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392 ++ I YL + ++ RL +I Sbjct: 692 FKMYAILAIFYLVIITLLTRLAKRLEKRI 720 >gi|257878496|ref|ZP_05658149.1| amino acid ABC transporter [Enterococcus faecium 1,230,933] gi|257894317|ref|ZP_05673970.1| amino acid ABC transporter [Enterococcus faecium 1,231,408] gi|257812724|gb|EEV41482.1| amino acid ABC transporter [Enterococcus faecium 1,230,933] gi|257830696|gb|EEV57303.1| amino acid ABC transporter [Enterococcus faecium 1,231,408] Length = 535 Score = 97.1 bits (240), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 63/209 (30%), Positives = 111/209 (53%), Gaps = 29/209 (13%) Query: 190 FVFSFVLGIVLSLF------ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243 F + V+G++ LF A R + + +P++ ++ F+ FGLP +V Sbjct: 349 FALAIVIGVIFGLFSVAPIRALRTIASIYVDIIRGIPMMVLAFFIFFGLPGIV------- 401 Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 G T+ P+F++ I L+ +A+IAEIVR G+ AVP GQMEA+ +L Sbjct: 402 ---------------GFTI-PDFLAGVITLTLNASAYIAEIVRGGINAVPVGQMEASRSL 445 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363 GL++ + + ++LPQA+R +IP +Q++ LK++++ A+G +L+ G I+ +T Q+ Sbjct: 446 GLSYNRTMQKIILPQAIRIMIPSFVNQFVISLKDTTIISAIGVVELLQTGKIIVARTTQS 505 Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392 + LI +YL L + L K+ Sbjct: 506 TYVYLIIAIMYLILITALTKLAKVLEKKV 534 >gi|89897620|ref|YP_521107.1| hypothetical protein DSY4874 [Desulfitobacterium hafniense Y51] gi|89337068|dbj|BAE86663.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 224 Score = 97.1 bits (240), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 66/203 (32%), Positives = 113/203 (55%), Gaps = 10/203 (4%) Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFN 255 +GIV+ LF L R + + + L + YI F G P LV + + Y F P L F Sbjct: 32 IGIVIGLFMA-LMRLSNSRILRGLSIAYIDFFR--GTPLLVQLLMVY---FALPQLLNFQ 85 Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315 + +F++ A+ + A+IAEI R+G+ ++ +GQ EAA +LG+T +A R V+ Sbjct: 86 V----PDNYQFIAAITAMGLNSGAYIAEIFRAGIQSIDKGQGEAARSLGMTQGQAMRHVI 141 Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375 LPQA + +IPPL ++++ LLK+SSL + DL+ G I+++T Q I L YL Sbjct: 142 LPQAFKRVIPPLGNEFIALLKDSSLVSFIALQDLMYSGKLIVSRTYQPFVIYLEVALFYL 201 Query: 376 SLSIMIALFMNRLNAKIALKEKK 398 +++++++ F+N + + + Sbjct: 202 AMTLILSRFVNYTERRFGKSDNR 224 >gi|125718174|ref|YP_001035307.1| arginine/histidine ABC transporter permease [Streptococcus sanguinis SK36] gi|125498091|gb|ABN44757.1| Arginine/histidine ABC transporter, permease component, putative [Streptococcus sanguinis SK36] Length = 722 Score = 97.1 bits (240), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 62/209 (29%), Positives = 110/209 (52%), Gaps = 23/209 (11%) Query: 190 FVFSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243 F + V+GI+ +F+ R + +PL+ ++ F+ +G+P L+ Sbjct: 530 FAIAMVIGIIFGMFSVSPYKPLRWIAEIFVDVIRGIPLMIVAAFIFWGIPNLI------- 582 Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 + + GQ + I F++ IALS A+IAEIVR G+ AVP GQMEA+ +L Sbjct: 583 ----ESMTGQQSPINA------FVAGTIALSLNAGAYIAEIVRGGIQAVPVGQMEASRSL 632 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363 G+++ K R ++LPQA + ++P +Q++ LK++++ A+G A+L G II + Q+ Sbjct: 633 GISYSKTMRKIILPQATKIMLPNFVNQFVIALKDTTIVSAIGLAELFKTGKDIIARNYQS 692 Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392 + I +YL + ++ RL +I Sbjct: 693 FRMYAILAVLYLIIITLLTRLAKRLEKRI 721 >gi|227551702|ref|ZP_03981751.1| glutamate ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus faecium TX1330] gi|227179143|gb|EEI60115.1| glutamate ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus faecium TX1330] Length = 487 Score = 97.1 bits (240), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 63/209 (30%), Positives = 111/209 (53%), Gaps = 29/209 (13%) Query: 190 FVFSFVLGIVLSLF------ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243 F + V+G++ LF A R + + +P++ ++ F+ FGLP +V Sbjct: 301 FALAIVIGVIFGLFSVAPIRALRTVASIYVDIIRGIPMMVLAFFIFFGLPGIV------- 353 Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 G T+ P+F++ I L+ +A+IAEIVR G+ AVP GQMEA+ +L Sbjct: 354 ---------------GFTI-PDFIAGVITLTLNASAYIAEIVRGGINAVPVGQMEASRSL 397 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363 GL++ + + ++LPQA+R +IP +Q++ LK++++ A+G +L+ G I+ +T Q+ Sbjct: 398 GLSYNRTMQKIILPQAIRIMIPSFVNQFVISLKDTTIISAIGVVELLQTGKIIVARTTQS 457 Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392 + LI +YL L + L K+ Sbjct: 458 TYVYLIIAIMYLILITALTKLAKVLEKKV 486 >gi|325690565|gb|EGD32568.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK115] Length = 729 Score = 97.1 bits (240), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 62/209 (29%), Positives = 110/209 (52%), Gaps = 23/209 (11%) Query: 190 FVFSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243 F + V+GI+ +F+ R + +PL+ ++ F+ +G+P L+ Sbjct: 537 FAIAMVIGIIFGMFSVSPYKPLRWIAEIFVDVIRGIPLMIVAAFIFWGIPNLI------- 589 Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 + + GQ + I F++ IALS A+IAEIVR G+ AVP GQMEA+ +L Sbjct: 590 ----ESMTGQQSPINA------FVAGTIALSLNAGAYIAEIVRGGIQAVPVGQMEASRSL 639 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363 G+++ K R ++LPQA + ++P +Q++ LK++++ A+G A+L G II + Q+ Sbjct: 640 GISYSKTMRKIILPQATKIMLPNFVNQFVIALKDTTIVSAIGLAELFKTGKDIIARNYQS 699 Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392 + I +YL + ++ RL +I Sbjct: 700 FRMYAILAVLYLIIITLLTRLAKRLEKRI 728 >gi|69248956|ref|ZP_00604829.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Enterococcus faecium DO] gi|258615978|ref|ZP_05713748.1| amino acid ABC transporter, amino acid-binding/permease protein [Enterococcus faecium DO] gi|293557298|ref|ZP_06675844.1| glutamine ABC transporter, permease/substrate-binding protein [Enterococcus faecium E1039] gi|293560170|ref|ZP_06676672.1| glutamine ABC transporter, permease/substrate-binding protein [Enterococcus faecium E1162] gi|294616498|ref|ZP_06696279.1| glutamine ABC transporter, permease/substrate-binding protein [Enterococcus faecium E1636] gi|294621567|ref|ZP_06700733.1| glutamine ABC transporter, permease/substrate-binding protein [Enterococcus faecium U0317] gi|68194329|gb|EAN08842.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Enterococcus faecium DO] gi|291590646|gb|EFF22374.1| glutamine ABC transporter, permease/substrate-binding protein [Enterococcus faecium E1636] gi|291598872|gb|EFF29923.1| glutamine ABC transporter, permease/substrate-binding protein [Enterococcus faecium U0317] gi|291600550|gb|EFF30856.1| glutamine ABC transporter, permease/substrate-binding protein [Enterococcus faecium E1039] gi|291605842|gb|EFF35274.1| glutamine ABC transporter, permease/substrate-binding protein [Enterococcus faecium E1162] Length = 500 Score = 97.1 bits (240), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 63/209 (30%), Positives = 111/209 (53%), Gaps = 29/209 (13%) Query: 190 FVFSFVLGIVLSLF------ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243 F + V+G++ LF A R + + +P++ ++ F+ FGLP +V Sbjct: 314 FALAIVIGVIFGLFSVAPIRALRTIASIYVDIIRGIPMMVLAFFIFFGLPGIV------- 366 Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 G T+ P+F++ I L+ +A+IAEIVR G+ AVP GQMEA+ +L Sbjct: 367 ---------------GFTI-PDFLAGVITLTLNASAYIAEIVRGGINAVPVGQMEASRSL 410 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363 GL++ + + ++LPQA+R +IP +Q++ LK++++ A+G +L+ G I+ +T Q+ Sbjct: 411 GLSYNRTMQKIILPQAIRIMIPSFVNQFVISLKDTTIISAIGVVELLQTGKIIVARTTQS 470 Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392 + LI +YL L + L K+ Sbjct: 471 TYVYLIIAIMYLILITALTKLAKVLEKKV 499 >gi|331700315|ref|YP_004336554.1| polar amino acid ABC transporter inner membrane subunit [Pseudonocardia dioxanivorans CB1190] gi|326955004|gb|AEA28701.1| polar amino acid ABC transporter, inner membrane subunit [Pseudonocardia dioxanivorans CB1190] Length = 302 Score = 97.1 bits (240), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 53/147 (36%), Positives = 90/147 (61%) Query: 237 LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296 L AL +L P +F + + + +F + + L AA++AEIVR G+++V RGQ Sbjct: 127 LAALYPRLSLGVPFGPEFISVDTNVLITQFAACLLGLGLNEAAYMAEIVRGGMLSVDRGQ 186 Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356 EAA ALG+T + R ++LPQAMR I+PP ++ +++LK +SL V +G+ +L++ I Sbjct: 187 AEAAGALGMTRSQTMRRIVLPQAMRVIVPPTGNETISMLKTTSLVVVIGYFELLTSAQRI 246 Query: 357 INQTGQAIEIILIWMFIYLSLSIMIAL 383 NQ Q I ++++ F YL L+ ++ + Sbjct: 247 SNQNFQVIPLLIVAAFWYLVLTSLLTI 273 >gi|323351404|ref|ZP_08087060.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis VMC66] gi|322122628|gb|EFX94339.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis VMC66] Length = 729 Score = 97.1 bits (240), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 62/209 (29%), Positives = 110/209 (52%), Gaps = 23/209 (11%) Query: 190 FVFSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243 F + V+GI+ +F+ R + +PL+ ++ F+ +G+P L+ Sbjct: 537 FAIAMVIGIIFGMFSVSPYKPLRWIAEIFVDVIRGIPLMIVAAFIFWGIPNLI------- 589 Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 + + GQ + I F++ IALS A+IAEIVR G+ AVP GQMEA+ +L Sbjct: 590 ----ESMTGQQSPINA------FVAGTIALSLNAGAYIAEIVRGGIQAVPVGQMEASRSL 639 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363 G+++ K R ++LPQA + ++P +Q++ LK++++ A+G A+L G II + Q+ Sbjct: 640 GISYSKTMRKIILPQATKIMLPNFVNQFVIALKDTTIVSAIGLAELFKTGKDIIARNYQS 699 Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392 + I +YL + ++ RL +I Sbjct: 700 FRMYAILAVLYLIIITLLTRLAKRLEKRI 728 >gi|322376796|ref|ZP_08051289.1| glutamine ABC transporter, glutamine-binding protein/permease protein [Streptococcus sp. M334] gi|321282603|gb|EFX59610.1| glutamine ABC transporter, glutamine-binding protein/permease protein [Streptococcus sp. M334] Length = 721 Score = 97.1 bits (240), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 62/209 (29%), Positives = 112/209 (53%), Gaps = 23/209 (11%) Query: 190 FVFSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243 F + V+GI+ +F+ R+ + +PL+ ++ F+ +G+P Sbjct: 529 FAIAIVIGIIFGMFSVSPYKSLRVISEIFVDVIRGIPLMILAAFIFWGIP---------- 578 Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 +F + + GQ + I +F++ IALS AA+IAEIVR G+ AVP GQMEA+ +L Sbjct: 579 -NFIESITGQQSPIN------DFVAGTIALSLNAAAYIAEIVRGGIQAVPVGQMEASRSL 631 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363 G+++ K R ++LPQA + ++P +Q++ LK++++ A+G +L G II + Q+ Sbjct: 632 GISYGKTMRKIILPQATKLMLPNFVNQFVIALKDTTIVSAIGLVELFQTGKIIIARNYQS 691 Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392 ++ I YL + ++ RL +I Sbjct: 692 FKMYAILAIFYLVIITLLTKLAKRLEKRI 720 >gi|313673773|ref|YP_004051884.1| amino acid abc transporter membrane protein, paat family [Calditerrivibrio nitroreducens DSM 19672] gi|312940529|gb|ADR19721.1| amino acid ABC transporter membrane protein, PAAT family [Calditerrivibrio nitroreducens DSM 19672] Length = 315 Score = 97.1 bits (240), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 66/204 (32%), Positives = 107/204 (52%), Gaps = 19/204 (9%) Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252 + V+GIV T L R K L + Y+ LI G P LV I + Y Sbjct: 131 AIVIGIV-----TGLCRISSNVALKKLAVTYVE--LIRGTPLLVQIFIFY---------- 173 Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312 FIG S AL+ + A+IAEIVR+G+ ++P+GQMEA+ +LG+ + +A R Sbjct: 174 --FFIGTVFKLDRITSGIAALAIFAGAYIAEIVRAGIQSIPKGQMEASRSLGMNYFQAMR 231 Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372 V+LPQA++ +PP+ Q+++L+K+SSL + DL G I++ T E+ + Sbjct: 232 YVILPQAIKRTLPPMAGQFISLIKDSSLVSVISITDLTKAGREIVSSTFSPFEVWFVVAV 291 Query: 373 IYLSLSIMIALFMNRLNAKIALKE 396 +YL L+ ++ + L ++A + Sbjct: 292 MYLVLTSGLSFLVQILERRLAASD 315 Score = 42.0 bits (97), Expect = 0.18, Method: Compositional matrix adjust. Identities = 22/59 (37%), Positives = 34/59 (57%) Query: 91 VGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 VG NT +++F ++ A +IG + G R+S+N + + YVE+ R P LV IF Y Sbjct: 115 VGLWNTLYISFVSILIAIVIGIVTGLCRISSNVALKKLAVTYVELIRGTPLLVQIFIFY 173 >gi|293568103|ref|ZP_06679440.1| glutamine ABC transporter, permease/substrate-binding protein [Enterococcus faecium E1071] gi|294617429|ref|ZP_06697063.1| glutamine ABC transporter, permease/substrate-binding protein [Enterococcus faecium E1679] gi|291589185|gb|EFF20996.1| glutamine ABC transporter, permease/substrate-binding protein [Enterococcus faecium E1071] gi|291596335|gb|EFF27594.1| glutamine ABC transporter, permease/substrate-binding protein [Enterococcus faecium E1679] Length = 500 Score = 97.1 bits (240), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 63/209 (30%), Positives = 111/209 (53%), Gaps = 29/209 (13%) Query: 190 FVFSFVLGIVLSLF------ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243 F + V+G++ LF A R + + +P++ ++ F+ FGLP +V Sbjct: 314 FALAIVIGVIFGLFSVAPIRALRTIASIYVDIIRGIPMMVLAFFIFFGLPGIV------- 366 Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 G T+ P+F++ I L+ +A+IAEIVR G+ AVP GQMEA+ +L Sbjct: 367 ---------------GFTI-PDFLAGVITLTLNASAYIAEIVRGGINAVPVGQMEASRSL 410 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363 GL++ + + ++LPQA+R +IP +Q++ LK++++ A+G +L+ G I+ +T Q+ Sbjct: 411 GLSYNRTMQKIILPQAIRIMIPSFVNQFVISLKDTTIISAIGVVELLQTGKIIVARTTQS 470 Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392 + LI +YL L + L K+ Sbjct: 471 TYVYLIIAIMYLILITALTKLAKVLEKKV 499 >gi|148658093|ref|YP_001278298.1| polar amino acid ABC transporter inner membrane subunit [Roseiflexus sp. RS-1] gi|148570203|gb|ABQ92348.1| polar amino acid ABC transporter, inner membrane subunit [Roseiflexus sp. RS-1] Length = 403 Score = 97.1 bits (240), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 73/205 (35%), Positives = 111/205 (54%), Gaps = 19/205 (9%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 VFSF LG++L+L R + L + YI LI G+P I++ + P+ Sbjct: 211 VFSFPLGVLLAL-----GRQSSLPVVRWLCVAYIE--LIRGVP---FISVLFMAQLMLPL 260 Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 F+ G T+ + + ++AA++AE VR GL ++PRGQ EAA ALGL K Sbjct: 261 -----FLPGITID-RVVRAMAGVVIFSAAYLAENVRGGLQSIPRGQYEAARALGLNPWKM 314 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT---GQAIEII 367 T L++LPQA+R++IP L Q++ L K++SL V VG DL+ + T++ Q G E+ Sbjct: 315 TLLIILPQALRAVIPILVGQFIALFKDTSLVVIVGLLDLMGIARTVLAQPDFLGLQAEVY 374 Query: 368 LIWMFIYLSLSIMIALFMNRLNAKI 392 FIY +++ F RL AK+ Sbjct: 375 TFVAFIYGIFCYLMSAFSQRLEAKL 399 >gi|15807149|ref|NP_295878.1| amino acid ABC transporter permease [Deinococcus radiodurans R1] gi|6459953|gb|AAF11703.1|AE002049_8 amino acid ABC transporter, permease protein [Deinococcus radiodurans R1] Length = 291 Score = 97.1 bits (240), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 48/133 (36%), Positives = 85/133 (63%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 EF S IAL+ A+ AE++R+G++AVPRGQ EAA +LGL+ + V+LPQA+R ++ Sbjct: 159 EFWSAVIALALNVGAYNAEVIRAGILAVPRGQSEAARSLGLSAGQTMNAVVLPQALRIVV 218 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 PPL + + LLK+SSLA + +L G + +++ Q + ++ +YL+L+ ++ LF Sbjct: 219 PPLVNNLVALLKDSSLASTIALLELTLSGQRVSSESFQPVPVLTTVAAVYLALTTVLTLF 278 Query: 385 MNRLNAKIALKEK 397 ++L ++ + + Sbjct: 279 TDQLEKRVKIASR 291 >gi|194398103|ref|YP_002037841.1| ABC transporter amino acid-binding protein/permease [Streptococcus pneumoniae G54] gi|194357770|gb|ACF56218.1| ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae G54] Length = 721 Score = 97.1 bits (240), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 62/209 (29%), Positives = 112/209 (53%), Gaps = 23/209 (11%) Query: 190 FVFSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243 F + V+GI+ +F+ R+ + +PL+ ++ F+ +G+P Sbjct: 529 FAIAIVIGIIFGMFSVSPYKSLRVISEIFVDVIRGIPLMILAAFIFWGIP---------- 578 Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 +F + + GQ + I +F++ IALS AA+IAEIVR G+ AVP GQMEA+ +L Sbjct: 579 -NFIESITGQQSPIN------DFVAGTIALSLNAAAYIAEIVRGGIQAVPVGQMEASRSL 631 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363 G+++ K R ++LPQA + ++P +Q++ LK++++ A+G +L G II + Q+ Sbjct: 632 GISYGKTMRKIILPQATKLMLPNFVNQFVIALKDTTIVSAIGLVELFQTGKIIIARNYQS 691 Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392 ++ I YL + ++ RL +I Sbjct: 692 FKMYAILAIFYLVIITLLTRLAKRLEKRI 720 >gi|157369456|ref|YP_001477445.1| polar amino acid ABC transporter inner membrane subunit [Serratia proteamaculans 568] gi|157321220|gb|ABV40317.1| polar amino acid ABC transporter, inner membrane subunit [Serratia proteamaculans 568] Length = 246 Score = 97.1 bits (240), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 49/129 (37%), Positives = 80/129 (62%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+S + L +TAA + E VR+ + ++PRGQ A +A+GLT + R VLLP A R I+P Sbjct: 111 FVSSMLCLGLFTAARVCEQVRAAIQSLPRGQRAAGLAMGLTLPQTYRYVLLPNAYRVIVP 170 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 P+TS+ LNL+KNS++A +G D+ + G +++ + A E Y++++ +I LFM Sbjct: 171 PMTSEMLNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAYESFTAITLAYIAINAVIMLFM 230 Query: 386 NRLNAKIAL 394 + K+ L Sbjct: 231 RLVERKVQL 239 Score = 43.5 bits (101), Expect = 0.053, Method: Compositional matrix adjust. Identities = 39/131 (29%), Positives = 59/131 (45%), Gaps = 19/131 (14%) Query: 81 SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140 +++Y I GF T L+ I A +G+L G R N+ ++ + YVE+FRN+P Sbjct: 17 GNTTYLGWIWSGFQVTVALSVCAWIIAFFVGSLFGILRTVPNRFLSTLGTCYVELFRNVP 76 Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200 +V F Y + +LP N G+ F T +D N + FV S + L Sbjct: 77 LIVQFFTWYLVIPELLPA--------------NMGMWFKT-ELDPNVQFFVSSM---LCL 118 Query: 201 SLF-ATRLSRH 210 LF A R+ Sbjct: 119 GLFTAARVCEQ 129 >gi|314939959|ref|ZP_07847159.1| ABC transporter, permease protein [Enterococcus faecium TX0133a04] gi|314942568|ref|ZP_07849402.1| ABC transporter, permease protein [Enterococcus faecium TX0133C] gi|314947466|ref|ZP_07850881.1| ABC transporter, permease protein [Enterococcus faecium TX0082] gi|314952490|ref|ZP_07855491.1| ABC transporter, permease protein [Enterococcus faecium TX0133A] gi|314992413|ref|ZP_07857839.1| ABC transporter, permease protein [Enterococcus faecium TX0133B] gi|314996253|ref|ZP_07861312.1| ABC transporter, permease protein [Enterococcus faecium TX0133a01] gi|313589575|gb|EFR68420.1| ABC transporter, permease protein [Enterococcus faecium TX0133a01] gi|313593048|gb|EFR71893.1| ABC transporter, permease protein [Enterococcus faecium TX0133B] gi|313595396|gb|EFR74241.1| ABC transporter, permease protein [Enterococcus faecium TX0133A] gi|313598672|gb|EFR77517.1| ABC transporter, permease protein [Enterococcus faecium TX0133C] gi|313640793|gb|EFS05373.1| ABC transporter, permease protein [Enterococcus faecium TX0133a04] gi|313646016|gb|EFS10596.1| ABC transporter, permease protein [Enterococcus faecium TX0082] Length = 487 Score = 97.1 bits (240), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 63/209 (30%), Positives = 111/209 (53%), Gaps = 29/209 (13%) Query: 190 FVFSFVLGIVLSLF------ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243 F + V+G++ LF A R + + +P++ ++ F+ FGLP +V Sbjct: 301 FALAIVIGVIFGLFSVAPIRALRTIASIYVDIIRGIPMMVLAFFIFFGLPGIV------- 353 Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 G T+ P+F++ I L+ +A+IAEIVR G+ AVP GQMEA+ +L Sbjct: 354 ---------------GFTI-PDFLAGVITLTLNASAYIAEIVRGGINAVPVGQMEASRSL 397 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363 GL++ + + ++LPQA+R +IP +Q++ LK++++ A+G +L+ G I+ +T Q+ Sbjct: 398 GLSYNRTMQKIILPQAIRIMIPSFVNQFVISLKDTTIISAIGVVELLQTGKIIVARTTQS 457 Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392 + LI +YL L + L K+ Sbjct: 458 TYVYLIIAIMYLILITALTKLAKVLEKKV 486 >gi|51245835|ref|YP_065719.1| glutamine ABC-transporter, permease protein (GlnP) [Desulfotalea psychrophila LSv54] gi|50876872|emb|CAG36712.1| probable glutamine ABC-transporter, permease protein (GlnP) [Desulfotalea psychrophila LSv54] Length = 222 Score = 97.1 bits (240), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 65/213 (30%), Positives = 112/213 (52%), Gaps = 29/213 (13%) Query: 191 VFSFVLGIVL------SLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244 VF FVLG+V +L+ R F+ +T + P+L + FL FGLP +A ++L Sbjct: 33 VFGFVLGVVFGLMKLSTLWPVRKIAGFYIETIRGTPMLVQAMFLYFGLP----MAFGFRL 88 Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304 P + I ++ + A+IAEIVR + ++ GQMEA ++G Sbjct: 89 -------------------PALAAGVIVIAINSGAYIAEIVRGAVQSIDSGQMEAGRSIG 129 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364 LT +A R V+ PQA R +IPPL +Q++ LK++SL + +G +L+ I+ +A Sbjct: 130 LTSLQAMRYVIWPQAFRRMIPPLGNQFIISLKDTSLLMIIGVGELLRTADEIVAVNFRAF 189 Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 E+ L IYL++++ IA + + ++ ++ + Sbjct: 190 EVYLACGLIYLAMTMSIARVLKIVEKRLQIQGR 222 >gi|295702499|ref|YP_003595574.1| glutamine ABC transporter permease GlnM [Bacillus megaterium DSM 319] gi|294800158|gb|ADF37224.1| glutamine ABC transporter, permease protein GlnM [Bacillus megaterium DSM 319] Length = 211 Score = 97.1 bits (240), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 51/124 (41%), Positives = 85/124 (68%), Gaps = 2/124 (1%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + L+ YTAAFIAE +R+G++AVP+GQ+EAA + GLT+ +A R ++LPQA++ +IPPL +Q Sbjct: 86 LGLTIYTAAFIAEAIRAGIMAVPKGQLEAARSSGLTYGQAMRFIILPQAIKIVIPPLGNQ 145 Query: 331 YLNLLKNSS-LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 ++NL+KNSS L + GF DL+ + ++T ++ + YL L+I ++L + L Sbjct: 146 FINLVKNSSVLGIVAGF-DLMYQADLVSSRTYVVFDVYIFVALFYLVLTIPLSLGVGYLE 204 Query: 390 AKIA 393 ++ Sbjct: 205 KRLG 208 >gi|226355645|ref|YP_002785385.1| ABC transporter permease [Deinococcus deserti VCD115] gi|226317635|gb|ACO45631.1| putative ABC transporter, permease component [Deinococcus deserti VCD115] Length = 264 Score = 97.1 bits (240), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 68/210 (32%), Positives = 118/210 (56%), Gaps = 8/210 (3%) Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247 ++ V S V+G+V+ + A + + +A L+I +LI G P LV I Y + Sbjct: 63 QLTVVSGVIGLVIGMIAG-IQKTSSNWLVRAPASLFI--WLIRGTPLLVQILFVY--NAL 117 Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307 P+L IG EF S IAL+ A+ AE++R+G++A+PRGQ EAA +LGL+ Sbjct: 118 PPLLAA---IGLKVELNEFWSAVIALALNVGAYNAEVIRAGILAIPRGQTEAARSLGLSG 174 Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367 V+LPQA+R ++PPL + + LLK+SSLA + +L G + +++ Q + ++ Sbjct: 175 GLTMSTVVLPQALRIVVPPLVNNLVALLKDSSLASTIALLELSLAGSRVSSESFQPVPVL 234 Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 +YL+L+ ++ LF ++L ++ + + Sbjct: 235 TTIAAVYLALTTVMTLFTDQLEKRVKVASR 264 >gi|307704942|ref|ZP_07641833.1| amino acid ABC transporter, amino acid-binding/permease protein [Streptococcus mitis SK597] gi|307621556|gb|EFO00602.1| amino acid ABC transporter, amino acid-binding/permease protein [Streptococcus mitis SK597] Length = 721 Score = 97.1 bits (240), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 62/209 (29%), Positives = 112/209 (53%), Gaps = 23/209 (11%) Query: 190 FVFSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243 F + V+GI+ +F+ R+ + +PL+ ++ F+ +G+P Sbjct: 529 FAIAIVIGIIFGMFSVSPYKSLRVISEIFVDVIRGIPLMILAAFIFWGIP---------- 578 Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 +F + + GQ + I +F++ IALS AA+IAEIVR G+ AVP GQMEA+ +L Sbjct: 579 -NFIESITGQQSPIN------DFVAGTIALSLNAAAYIAEIVRGGIQAVPVGQMEASRSL 631 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363 G+++ K R ++LPQA + ++P +Q++ LK++++ A+G +L G II + Q+ Sbjct: 632 GISYGKTMRKIILPQATKLMLPNFVNQFVIALKDTTIVSAIGLVELFQTGKIIIARNYQS 691 Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392 ++ I YL + ++ RL +I Sbjct: 692 FKMYAILAIFYLVIITLLTKLAKRLEKRI 720 >gi|323142137|ref|ZP_08076982.1| glutamine ABC transporter, permease protein GlnP [Phascolarctobacterium sp. YIT 12067] gi|322413397|gb|EFY04271.1| glutamine ABC transporter, permease protein GlnP [Phascolarctobacterium sp. YIT 12067] Length = 216 Score = 97.1 bits (240), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 66/179 (36%), Positives = 99/179 (55%), Gaps = 13/179 (7%) Query: 220 PLLYISTF---LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 PL Y + I G P LV I L Y F P N IG S V P F++ A S Sbjct: 48 PLRYFANVYVDFIRGTPLLVQIFLVY---FALP-----NIIG-SRVDP-FVAAISACSIN 97 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 + A++AEI R+G+ ++ +GQMEA +LG+T + R +++PQA + IIPPL ++++ +LK Sbjct: 98 SGAYVAEIFRAGIQSIDKGQMEAGRSLGMTWAQTMRYIIMPQAFKRIIPPLGNEFIAMLK 157 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395 +SSL +GF +L G II +T + EI + IYL ++ +A F L + K Sbjct: 158 DSSLVSVIGFEELTRRGQLIIARTYASFEIWMAVAIIYLIMTFAVARFTGYLERRFDTK 216 >gi|270263716|ref|ZP_06191985.1| transporter [Serratia odorifera 4Rx13] gi|270042600|gb|EFA15695.1| transporter [Serratia odorifera 4Rx13] Length = 246 Score = 97.1 bits (240), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 49/129 (37%), Positives = 79/129 (61%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+S + L +TAA + E VR+ + ++PRGQ A +A+GLT + R VLLP A R I+P Sbjct: 111 FISSMLCLGLFTAARVCEQVRAAIQSLPRGQRAAGLAMGLTLPQTYRYVLLPNAYRVIVP 170 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 P+TS+ LNL+KNS++A +G D+ + G +++ + A E Y+ ++ +I LFM Sbjct: 171 PMTSEMLNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAYESFTAITLAYIGINAVIMLFM 230 Query: 386 NRLNAKIAL 394 + K+ L Sbjct: 231 RLVEKKVQL 239 Score = 43.5 bits (101), Expect = 0.066, Method: Compositional matrix adjust. Identities = 39/131 (29%), Positives = 59/131 (45%), Gaps = 19/131 (14%) Query: 81 SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140 +++Y I GF T L+ I A +G+L G R N+ ++ + YVE+FRN+P Sbjct: 17 GNTTYLGWIWSGFQVTVALSVCAWIIAFFVGSLFGILRTVPNRFLSALGTCYVELFRNVP 76 Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200 +V F Y V +LP N G+ F T +D N + F+ S + L Sbjct: 77 LIVQFFTWYLVVPELLPA--------------NLGMWFKT-ELDPNVQFFISSM---LCL 118 Query: 201 SLF-ATRLSRH 210 LF A R+ Sbjct: 119 GLFTAARVCEQ 129 >gi|219670747|ref|YP_002461182.1| polar amino acid ABC transporter inner membrane subunit [Desulfitobacterium hafniense DCB-2] gi|219541007|gb|ACL22746.1| polar amino acid ABC transporter, inner membrane subunit [Desulfitobacterium hafniense DCB-2] Length = 224 Score = 97.1 bits (240), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 67/208 (32%), Positives = 112/208 (53%), Gaps = 20/208 (9%) Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY-----QLHFDKPV 250 +GIV+ LF L R + + + + YI F G P LV I + Y L+F P Sbjct: 32 MGIVIGLFMA-LMRLSNSRILRGFAIAYIDFFR--GTPLLVQILMVYFAVPQLLNFQIP- 87 Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 + FI G + A+ + A+IAEI R+G+ ++ +GQ EAA +LG+T +A Sbjct: 88 -DNYQFIAGIS----------AMGLNSGAYIAEIFRAGIQSIDKGQGEAARSLGMTQGQA 136 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370 R V+LPQA + +IPPL ++++ LLK+SSL + DL+ G I+++T Q I L Sbjct: 137 MRHVILPQAFKRVIPPLGNEFIALLKDSSLVSFIALQDLMYSGKLIVSRTYQPFVIYLEV 196 Query: 371 MFIYLSLSIMIALFMNRLNAKIALKEKK 398 YL+++++++ F+N + + + Sbjct: 197 ALFYLAMTLILSRFVNYTERRFGKSDNR 224 >gi|90962415|ref|YP_536331.1| glutamine transport system permease protein [Lactobacillus salivarius UCC118] gi|227891535|ref|ZP_04009340.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus salivarius ATCC 11741] gi|301299246|ref|ZP_07205533.1| ABC transporter, permease protein [Lactobacillus salivarius ACS-116-V-Col5a] gi|90821609|gb|ABE00248.1| Glutamine transport system permease protein [Lactobacillus salivarius UCC118] gi|227866682|gb|EEJ74103.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus salivarius ATCC 11741] gi|300215038|gb|ADJ79454.1| Glutamine transport system permease protein [Lactobacillus salivarius CECT 5713] gi|300853206|gb|EFK80803.1| ABC transporter, permease protein [Lactobacillus salivarius ACS-116-V-Col5a] Length = 212 Score = 97.1 bits (240), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 56/124 (45%), Positives = 81/124 (65%), Gaps = 2/124 (1%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I L+ YT+AFIAE VR+G+ AV GQME A A GLT+ + R ++LPQA + +IPPL +Q Sbjct: 90 IGLTLYTSAFIAETVRAGIKAVGVGQMEGARANGLTYWQTMRYIILPQAFKLVIPPLGNQ 149 Query: 331 YLNLLKNSS-LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 ++NL+KNSS LA GF DL+ G I + + + I L+ YL L++ ++ +M L Sbjct: 150 FINLIKNSSVLAFVAGF-DLMYQGDVIASASFETINTYLVVGVFYLILTLPLSYYMRYLE 208 Query: 390 AKIA 393 K+A Sbjct: 209 KKLA 212 Score = 39.7 bits (91), Expect = 0.91, Method: Compositional matrix adjust. Identities = 22/60 (36%), Positives = 33/60 (55%) Query: 90 LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 L GF NT + + + IIG++ + +KLV I +Y+E+FRNIP LV+ Y Sbjct: 13 LTGFENTILCSVIALFFSLIIGSIFAILQTVPSKLVRTIANIYIEIFRNIPLLVITMVFY 72 >gi|168491161|ref|ZP_02715304.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae CDC0288-04] gi|183574490|gb|EDT95018.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae CDC0288-04] Length = 721 Score = 96.7 bits (239), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 62/209 (29%), Positives = 112/209 (53%), Gaps = 23/209 (11%) Query: 190 FVFSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243 F + V+GI+ +F+ R+ + +PL+ ++ F+ +G+P Sbjct: 529 FAIAIVIGIIFGMFSVSPYKSLRVISEIFVDVIRGIPLMILAAFIFWGIP---------- 578 Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 +F + + GQ + I +F++ IALS AA+IAEIVR G+ AVP GQMEA+ +L Sbjct: 579 -NFIESITGQQSPIN------DFVAGTIALSLNAAAYIAEIVRGGIQAVPVGQMEASRSL 631 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363 G+++ K R ++LPQA + ++P +Q++ LK++++ A+G +L G II + Q+ Sbjct: 632 GISYGKTMRKIILPQATKLMLPNFVNQFVIALKDTTIVSAIGLVELFQTGKIIIARNYQS 691 Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392 ++ I YL + ++ RL +I Sbjct: 692 FKMYAILAIFYLVIITLLTRLAKRLEKRI 720 >gi|50120252|ref|YP_049419.1| glutamate/aspartate transport system permease [Pectobacterium atrosepticum SCRI1043] gi|49610778|emb|CAG74223.1| glutamate/aspartate transport system permease protein [Pectobacterium atrosepticum SCRI1043] Length = 246 Score = 96.7 bits (239), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 51/129 (39%), Positives = 78/129 (60%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+S I L +TAA + E VR+G+ ++PRGQ A +A+GLT + R VLLP A R I+P Sbjct: 111 FLSSMICLGLFTAARVCEQVRAGIQSLPRGQKAAGLAMGLTLPQTYRYVLLPNAYRVIVP 170 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PLTS+ LNL+KNS++A +G D+ + G +++ + A E Y+ ++ +I L M Sbjct: 171 PLTSEMLNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAYESFTAITLAYVGINAVIMLIM 230 Query: 386 NRLNAKIAL 394 + K L Sbjct: 231 QVVERKTRL 239 Score = 44.3 bits (103), Expect = 0.036, Method: Compositional matrix adjust. Identities = 41/131 (31%), Positives = 60/131 (45%), Gaps = 19/131 (14%) Query: 81 SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140 +++Y IL G T L+ I A +IG+L G R N+ ++ I YVE+FRN+P Sbjct: 17 GNTTYLGWILSGLQVTVTLSICAWIIAFLIGSLFGILRTVPNRFLSSIGTCYVELFRNVP 76 Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200 +V F Y V +LP+ N G+ F +D N + F+ S I L Sbjct: 77 LIVQFFTWYLVVPELLPV--------------NIGMWFKA-ELDPNIQFFLSSM---ICL 118 Query: 201 SLF-ATRLSRH 210 LF A R+ Sbjct: 119 GLFTAARVCEQ 129 >gi|261822383|ref|YP_003260489.1| polar amino acid ABC transporter inner membrane protein [Pectobacterium wasabiae WPP163] gi|261606396|gb|ACX88882.1| polar amino acid ABC transporter, inner membrane subunit [Pectobacterium wasabiae WPP163] Length = 246 Score = 96.7 bits (239), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 51/129 (39%), Positives = 78/129 (60%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+S I L +TAA + E VR+G+ ++PRGQ A +A+GLT + R VLLP A R I+P Sbjct: 111 FLSSMICLGLFTAARVCEQVRAGIQSLPRGQKAAGLAMGLTLPQTYRYVLLPNAYRVIVP 170 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PLTS+ LNL+KNS++A +G D+ + G +++ + A E Y+ ++ +I L M Sbjct: 171 PLTSEMLNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAYESFTAITLAYVGINAIIMLIM 230 Query: 386 NRLNAKIAL 394 + K L Sbjct: 231 QVVERKTRL 239 Score = 44.3 bits (103), Expect = 0.033, Method: Compositional matrix adjust. Identities = 41/131 (31%), Positives = 60/131 (45%), Gaps = 19/131 (14%) Query: 81 SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140 +++Y IL G T L+ I A +IG+L G R N+ ++ I YVE+FRN+P Sbjct: 17 GNTTYLGWILSGLQVTVTLSICAWIIAFLIGSLFGILRTVPNRFLSSIGTCYVELFRNVP 76 Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200 +V F Y V +LP+ N G+ F +D N + F+ S I L Sbjct: 77 LIVQFFTWYLVVPELLPV--------------NIGMWFKA-ELDPNIQFFLSSM---ICL 118 Query: 201 SLF-ATRLSRH 210 LF A R+ Sbjct: 119 GLFTAARVCEQ 129 >gi|226938962|ref|YP_002794033.1| GltJ [Laribacter hongkongensis HLHK9] gi|226713886|gb|ACO73024.1| GltJ [Laribacter hongkongensis HLHK9] Length = 248 Score = 96.7 bits (239), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 59/144 (40%), Positives = 87/144 (60%), Gaps = 5/144 (3%) Query: 255 NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLV 314 N++ S PEF + IAL YT+A +AE VR+G++ + RGQ A +ALGLT + R V Sbjct: 99 NWVKQSMPLPEFSTAVIALGFYTSARVAEQVRTGILTLSRGQKNAGLALGLTLGQTYRYV 158 Query: 315 LLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374 +LP A R I+PPLTS+++N+ KNS++A+A+G +L + TG+ I + Y Sbjct: 159 MLPMAFRIIVPPLTSEFMNIFKNSAVALAIGLTELTF---QMRQMTGEYAPANPIEVMTY 215 Query: 375 LSLSIMIALFMNRLNAKIALKEKK 398 SL +I F +N +AL EKK Sbjct: 216 TSLLYLIVAF--SVNRIMALVEKK 237 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 40/116 (34%), Positives = 56/116 (48%), Gaps = 15/116 (12%) Query: 72 IDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRV 131 I QG VP T + Y +L G T A I A +IGTLVG GR NK V+ + Sbjct: 11 ILQG-VPDTEEFYYQ-WLLSGLGWTIATALCAWIIALVIGTLVGVGRTVPNKAVSGLTTA 68 Query: 132 YVEVFRNIPPLVVIFFLY------------KSVLSVLPIPDHSI-VLPFGMFLNNR 174 YVE+FRN+P +V +F + V +P+P+ S V+ G + + R Sbjct: 69 YVELFRNVPLIVQMFLWFFVFPEFLPETASNWVKQSMPLPEFSTAVIALGFYTSAR 124 >gi|297521618|ref|ZP_06940004.1| predicted amino-acid transporter subunit [Escherichia coli OP50] Length = 163 Score = 96.7 bits (239), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 50/138 (36%), Positives = 78/138 (56%) Query: 43 WCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFS 102 W +N N+ ++ G FL AGF I Q ++ Y +Y +VG +NT ++ Sbjct: 12 WLFHNTVTNLNNRGITSGFAFLDRSAGFGIVQHLIDYQQGDTYGRVFIVGLLNTLLVSAL 71 Query: 103 GMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHS 162 ++ A+++G +G RLS N L+ + +Y+E+FRNIPPL+ IFF Y +VL LP P + Sbjct: 72 CIVFASVLGFFIGLARLSDNWLLRKLSTIYIEIFRNIPPLLQIFFWYFAVLRNLPGPRQA 131 Query: 163 IVLPFGMFLNNRGLSFPT 180 + FL+NRGL P+ Sbjct: 132 VSAFDLAFLSNRGLYIPS 149 >gi|289168045|ref|YP_003446314.1| ABC transporter membrane spanning permease-glutamine transport [Streptococcus mitis B6] gi|288907612|emb|CBJ22449.1| ABC transporter membrane spanning permease-glutamine transport [Streptococcus mitis B6] Length = 721 Score = 96.7 bits (239), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 62/209 (29%), Positives = 112/209 (53%), Gaps = 23/209 (11%) Query: 190 FVFSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243 F + V+GI+ +F+ R+ + +PL+ ++ F+ +G+P Sbjct: 529 FAIAIVIGIIFGMFSVSPYKSLRVISEIFVDVIRGIPLMILAAFIFWGIP---------- 578 Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 +F + + GQ + I +F++ IALS AA+IAEIVR G+ AVP GQMEA+ +L Sbjct: 579 -NFIESITGQQSPIN------DFVAGTIALSLNAAAYIAEIVRGGIQAVPVGQMEASRSL 631 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363 G+++ K R ++LPQA + ++P +Q++ LK++++ A+G +L G II + Q+ Sbjct: 632 GISYGKTMRKIILPQATKLMLPNFVNQFVIALKDTTIVSAIGLVELFQTGKIIIARNYQS 691 Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392 ++ I YL + ++ RL +I Sbjct: 692 FKMYAILAIFYLVIITLLTKLAKRLEKRI 720 >gi|295426473|ref|ZP_06819123.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus amylolyticus DSM 11664] gi|295063841|gb|EFG54799.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus amylolyticus DSM 11664] Length = 213 Score = 96.7 bits (239), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 56/129 (43%), Positives = 84/129 (65%), Gaps = 2/129 (1%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F S I L+ YT+AFIAE VRSG+ ++ GQME A + G+T+ +A R V+LPQAM+ +IP Sbjct: 85 FQSGTIGLTLYTSAFIAETVRSGINSIGEGQMEGARSNGMTYIQAMRYVILPQAMKIVIP 144 Query: 326 PLTSQYLNLLKNSS-LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 PL +Q++NL+KNSS LA GF DL+ I + Q I+ ++ YL L++ ++ + Sbjct: 145 PLGNQFVNLIKNSSVLAFVAGF-DLMYQAQLIAFASFQTIDTYIVVGLFYLVLTLPLSYY 203 Query: 385 MNRLNAKIA 393 + L K+A Sbjct: 204 LRHLEKKLA 212 Score = 40.8 bits (94), Expect = 0.41, Method: Compositional matrix adjust. Identities = 22/63 (34%), Positives = 34/63 (53%) Query: 87 TAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIF 146 ++ L GF NT + +I + I+G ++ K V I +Y+EVFRNIP LV++ Sbjct: 10 SSFLTGFWNTILCSVIALIFSLILGIFFAMLEVAPPKFVRIIAHIYIEVFRNIPLLVIVM 69 Query: 147 FLY 149 Y Sbjct: 70 IFY 72 >gi|167562820|ref|ZP_02355736.1| binding-protein-dependent transport system inner membrane component [Burkholderia oklahomensis EO147] Length = 241 Score = 96.7 bits (239), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 59/149 (39%), Positives = 85/149 (57%), Gaps = 18/149 (12%) Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF-----IGGSTV---SPEFMSLYI 271 PL+ F FG+ +L+ +PV+ N +GG + S EF++ ++ Sbjct: 64 PLVVQLLFWYFGVASLL----------PEPVMAWLNARHAIAVGGVELHWPSFEFVAGWV 113 Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 LSCYT+AF+AE +GL VP GQ AA ALGL + R V+LPQA+R +PPL QY Sbjct: 114 GLSCYTSAFVAEEFHAGLRGVPAGQYHAASALGLAPLQTLRFVVLPQAVRIALPPLFGQY 173 Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQT 360 +NL+KNSSL +A+G A+L + +T Sbjct: 174 MNLIKNSSLTMAIGVAELSYASRQVETET 202 >gi|322385682|ref|ZP_08059326.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus cristatus ATCC 51100] gi|321270420|gb|EFX53336.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus cristatus ATCC 51100] Length = 724 Score = 96.7 bits (239), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 62/209 (29%), Positives = 112/209 (53%), Gaps = 23/209 (11%) Query: 190 FVFSFVLGIVLSLF------ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243 F + V+GI+ +F A R+ + +PL+ ++ F+ +G+P L+ Sbjct: 532 FAIAMVIGIIFGMFSVSPIKALRIISEIFVDVIRGIPLMILAAFIFWGIPNLL------- 584 Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 + + GQ + I +F++ IALS A+IAEIVR G+ AVP GQMEA+ +L Sbjct: 585 ----ESMTGQQSPIN------DFVAGTIALSLNAGAYIAEIVRGGIQAVPVGQMEASRSL 634 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363 G+++ K R ++LPQA + ++P +Q++ LK++++ A+G +L G II + Q+ Sbjct: 635 GISYGKTMRKIILPQATKIMLPNFVNQFVIALKDTTIVSAIGLVELFQTGKIIIARNYQS 694 Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392 ++ I +YL + ++ RL +I Sbjct: 695 FKMYAILAVLYLVIITLLTRLAKRLEKRI 723 >gi|312621848|ref|YP_004023461.1| polar amino acid ABC transporter inner membrane subunit [Caldicellulosiruptor kronotskyensis 2002] gi|312202315|gb|ADQ45642.1| polar amino acid ABC transporter, inner membrane subunit [Caldicellulosiruptor kronotskyensis 2002] Length = 220 Score = 96.7 bits (239), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 70/235 (29%), Positives = 118/235 (50%), Gaps = 38/235 (16%) Query: 178 FPTL------TMDTNAKIFVFSFVLGIVLSLFATRLSR--------HFHEKTGKALPLLY 223 FP L T++ A V G+V +LF R+S+ F+ + PLL Sbjct: 10 FPVLLKASVVTIELTAIAVTIGLVFGLVAALF--RISKIKLLNYIGSFYVWLFRGTPLLL 67 Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283 F+ +GLP +V P L P F++ IAL + A+ AE Sbjct: 68 QIFFIYYGLPKIV------------PAL----------TLPAFLAGAIALIINSGAYTAE 105 Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343 I+R+ ++++ RGQ EAA ALG+T+ + R V++PQ + +IPP+ ++++ LLK+SSL Sbjct: 106 IIRAAILSIDRGQYEAAKALGMTYLQTMRYVIVPQTYKRLIPPIGNEFIALLKDSSLVST 165 Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 +G +L+ + TG+ EI L + IYL+L+ + + N L ++ E++ Sbjct: 166 IGMVELMRAAQLKASATGRDAEIYLAALVIYLALTTVFSTIFNWLEKRLGKYEQR 220 >gi|227114974|ref|ZP_03828630.1| glutamate/aspartate transport system permease protein [Pectobacterium carotovorum subsp. brasiliensis PBR1692] gi|227327384|ref|ZP_03831408.1| glutamate/aspartate transport system permease protein [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 246 Score = 96.7 bits (239), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 51/129 (39%), Positives = 78/129 (60%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+S I L +TAA + E VR+G+ ++PRGQ A +A+GLT + R VLLP A R I+P Sbjct: 111 FLSSMICLGLFTAARVCEQVRAGIQSLPRGQKAAGLAMGLTLPQTYRYVLLPNAYRVIVP 170 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PLTS+ LNL+KNS++A +G D+ + G +++ + A E Y+ ++ +I L M Sbjct: 171 PLTSEMLNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAYESFTAITLAYVGINAIIMLIM 230 Query: 386 NRLNAKIAL 394 + K L Sbjct: 231 QVVERKTRL 239 Score = 45.8 bits (107), Expect = 0.011, Method: Compositional matrix adjust. Identities = 42/131 (32%), Positives = 60/131 (45%), Gaps = 19/131 (14%) Query: 81 SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140 +++Y IL G T L+ I A +IG+L G R N+ +A I YVE+FRN+P Sbjct: 17 GNTTYLGWILSGLQVTVTLSICAWIIAFLIGSLFGILRTVPNRFLAGIGTCYVELFRNVP 76 Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200 +V F Y V +LP+ N G+ F +D N + F+ S I L Sbjct: 77 LIVQFFTWYLVVPELLPV--------------NIGMWFKA-ELDPNIQFFLSSM---ICL 118 Query: 201 SLF-ATRLSRH 210 LF A R+ Sbjct: 119 GLFTAARVCEQ 129 >gi|326803927|ref|YP_004321745.1| putative glutamate/glutamine/aspartate/asparagine transport system permease protein BztB [Aerococcus urinae ACS-120-V-Col10a] gi|326650859|gb|AEA01042.1| putative glutamate/glutamine/aspartate/asparagine transport system permease protein BztB [Aerococcus urinae ACS-120-V-Col10a] Length = 213 Score = 96.7 bits (239), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 49/123 (39%), Positives = 77/123 (62%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I L+ YT+AFIA++VRSG+ AVP GQMEA ++ G T + ++ PQA+R +IPPL +Q Sbjct: 90 IGLTIYTSAFIADVVRSGIEAVPHGQMEAGLSQGFTATETMVYIIFPQAVRIVIPPLGNQ 149 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++NL+KNSS+ V DL+ G I ++T + ++ YL L+I + M L Sbjct: 150 FINLVKNSSILAMVAGLDLMYFGDLIASETFNTFDSYILVALFYLVLTIPLTALMQYLER 209 Query: 391 KIA 393 +++ Sbjct: 210 RLS 212 Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust. Identities = 23/67 (34%), Positives = 43/67 (64%) Query: 83 SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142 ++Y++ + +GF NT ++ ++ + +IG+LVG + S K + + +YVE FRNIP L Sbjct: 6 NNYSSELFLGFKNTIMVSVLALVFSLVIGSLVGIMQTSHPKGLRMLGDIYVEFFRNIPLL 65 Query: 143 VVIFFLY 149 +++ F Y Sbjct: 66 IIVMFFY 72 >gi|199599085|ref|ZP_03212491.1| ABC-type amino acid transport system, permease component [Lactobacillus rhamnosus HN001] gi|229553195|ref|ZP_04441920.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus rhamnosus LMS2-1] gi|258509001|ref|YP_003171752.1| amino acid ABC transporter permease [Lactobacillus rhamnosus GG] gi|258540195|ref|YP_003174694.1| amino acid ABC transporter permease [Lactobacillus rhamnosus Lc 705] gi|199590048|gb|EDY98148.1| ABC-type amino acid transport system, permease component [Lactobacillus rhamnosus HN001] gi|229313491|gb|EEN79464.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus rhamnosus LMS2-1] gi|257148928|emb|CAR87901.1| ABC transporter, amino acid transporter permease protein [Lactobacillus rhamnosus GG] gi|257151871|emb|CAR90843.1| ABC transporter, amino acid transporter permease protein [Lactobacillus rhamnosus Lc 705] gi|259650294|dbj|BAI42456.1| amino acid ABC transporter permease component [Lactobacillus rhamnosus GG] Length = 220 Score = 96.7 bits (239), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 61/167 (36%), Positives = 94/167 (56%), Gaps = 30/167 (17%) Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPT 234 +T++ + FSFVLG++L L ++F G + LPLL I F F LP Sbjct: 22 VTLEVSIASIFFSFVLGVILGLARYVKIKYFSAAVGFVIDVIRNLPLLLILFFTYFALPD 81 Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294 + + + N I + V A+S + +A +AEIVRSG+ AVPR Sbjct: 82 IGI---------------RLNVIVAAIV---------AMSIFESAMLAEIVRSGINAVPR 117 Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341 GQMEAA + GLT +A R +++PQA++ +IPP+ SQ+++L+K++SLA Sbjct: 118 GQMEAARSNGLTFYQAMRYIIMPQALKKMIPPIVSQFISLVKDTSLA 164 >gi|213052443|ref|ZP_03345321.1| glutamate/aspartate transport system permease protein GltJ [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] Length = 187 Score = 96.7 bits (239), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 50/129 (38%), Positives = 81/129 (62%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+S I L +TAA + E VR+ + ++PRGQ AA+A+GLT +A R VLLP A R I+P Sbjct: 52 FLSSMICLGLFTAARVCEQVRAAIQSLPRGQKNAALAMGLTLPQAYRYVLLPNAYRVIVP 111 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 P+TS+ +NL+KNS++A +G D+ + G +++ + A E Y+ ++ +I L M Sbjct: 112 PMTSEMMNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAWESFTAITLAYVLINAVIMLVM 171 Query: 386 NRLNAKIAL 394 + + K+ L Sbjct: 172 SLVERKVRL 180 >gi|229587938|ref|YP_002870057.1| putative ABC transporter membrane protein [Pseudomonas fluorescens SBW25] gi|229359804|emb|CAY46654.1| putative ABC transport system, membrane protein [Pseudomonas fluorescens SBW25] Length = 319 Score = 96.7 bits (239), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 69/207 (33%), Positives = 116/207 (56%), Gaps = 17/207 (8%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 V S +LG+ + L AT L R T + L +Y+ L+ G P LV I + Y Sbjct: 129 VVSGILGLAIGL-ATGLCRLSSNPTLRDLSTIYVE--LVRGTPLLVQIFIFY-------- 177 Query: 251 LGQFNFIGGS-TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309 FIG +S EF + ALS +T A++AEIVR+G+ ++ RGQ EAA +LGL+ + Sbjct: 178 ----FFIGTVLNLSREFAGI-AALSLFTGAYVAEIVRAGVQSITRGQNEAARSLGLSASQ 232 Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369 + R V+LPQA + ++PPL Q+++L+K++SL + +L+ G +I + EI+ Sbjct: 233 SMRHVVLPQAFKRVLPPLAGQFISLVKDTSLVSVIAITELLKSGREVITTSFSPFEILFC 292 Query: 370 WMFIYLSLSIMIALFMNRLNAKIALKE 396 +YL +++ ++ +RL ++A + Sbjct: 293 VAGLYLLINLPLSKMASRLERRLAQSD 319 Score = 37.7 bits (86), Expect = 3.2, Method: Compositional matrix adjust. Identities = 25/81 (30%), Positives = 37/81 (45%) Query: 69 GFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWI 128 G ++ +G V + ++ G T WL+ I IG G RLS+N + + Sbjct: 97 GDDVAEGDVVGVTRHWALGPLMWGLWTTLWLSVVSGILGLAIGLATGLCRLSSNPTLRDL 156 Query: 129 CRVYVEVFRNIPPLVVIFFLY 149 +YVE+ R P LV IF Y Sbjct: 157 STIYVELVRGTPLLVQIFIFY 177 >gi|73540164|ref|YP_294684.1| amino acid ABC transporter permease [Ralstonia eutropha JMP134] gi|72117577|gb|AAZ59840.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Ralstonia eutropha JMP134] Length = 242 Score = 96.7 bits (239), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 50/140 (35%), Positives = 85/140 (60%), Gaps = 6/140 (4%) Query: 258 GGSTV------SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311 GG T+ + +F++ + L +TAA + E VRSG+ ++PRGQ A +A+G T + Sbjct: 93 GGETIKQMNPFTQQFLAAMLCLGTFTAARVCEQVRSGINSLPRGQKNAGLAMGFTLPQTY 152 Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371 R VLLP A R I+PPLTS++LN+ KNS++A +G +L + G +++ T + E + Sbjct: 153 RFVLLPMAFRVIVPPLTSEFLNIFKNSAVASTIGLLELAAQGRQLVDYTARPYESFIAVT 212 Query: 372 FIYLSLSIMIALFMNRLNAK 391 +Y ++I++ L M + A+ Sbjct: 213 VMYALINIVVMLVMRWVEAR 232 Score = 40.8 bits (94), Expect = 0.35, Method: Compositional matrix adjust. Identities = 26/77 (33%), Positives = 39/77 (50%) Query: 81 SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140 + +Y ++ G T L S + A IG+++G R NK ++ YVE+FRNIP Sbjct: 16 QNETYLDWMISGLKVTIALGLSSWVIALAIGSVLGVLRTVPNKWLSGFAAAYVELFRNIP 75 Query: 141 PLVVIFFLYKSVLSVLP 157 LV +F Y +LP Sbjct: 76 LLVQLFIWYFVGPELLP 92 >gi|322412041|gb|EFY02949.1| glutamine-binding protein / glutamine transport system permease protein glnP [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957] Length = 725 Score = 96.7 bits (239), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 63/211 (29%), Positives = 109/211 (51%), Gaps = 27/211 (12%) Query: 190 FVFSFVLGIVLSLFA---TRLSRHFHE---KTGKALPLLYISTFLIFGLPTLVLIALKYQ 243 F + ++GI+ + A T+ RH + +PL+ ++ F+ +G+P L+ +Q Sbjct: 533 FAIAMIIGIIFGMMAVSPTKSLRHISTIFVDVVRGIPLMIVAAFIFWGVPNLIESMTGHQ 592 Query: 244 LHFDKPVLGQFNFIGGSTVSP--EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301 SP +F++ IALS A+IAEIVR G+ AVP GQMEA+ Sbjct: 593 -------------------SPINDFLAATIALSLNGGAYIAEIVRGGIEAVPAGQMEASR 633 Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361 +LGL + R V+LPQA++ ++P +Q++ LK++++ A+G +L G II + Sbjct: 634 SLGLPYATTMRKVILPQAVKLMLPNFINQFVISLKDTTIVSAIGLVELFQTGKIIIARNY 693 Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 Q+ + I IYL + ++ RL ++ Sbjct: 694 QSFRMYAILAIIYLIMITLLTRLAKRLEKRL 724 >gi|75910090|ref|YP_324386.1| amino acid ABC transporter permease [Anabaena variabilis ATCC 29413] gi|75703815|gb|ABA23491.1| L-arginine ABC transporter membrane protein / L-glutamine ABC transporter membrane protein / L-arginine-binding protein / L-histidine-binding protein / L-histidine ABC transporter membrane protein / L-lysine-binding protein / L-lysine ABC transporter membrane protein / L-glutamine-binding protein [Anabaena variabilis ATCC 29413] Length = 501 Score = 96.7 bits (239), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 63/174 (36%), Positives = 97/174 (55%), Gaps = 20/174 (11%) Query: 217 KALPLLYISTFLI-FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSC 275 + PLL + F+I FG+P L L + +FD+ V G IALS Sbjct: 331 RGTPLL-VQIFMIYFGIPALAQ-QLGFTFNFDRWVAG-----------------VIALSV 371 Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335 AA+IAEIVR+G+ ++ GQ EAA +LGL RLV+ PQA R ++PPL +++++LL Sbjct: 372 NAAAYIAEIVRAGIQSIEIGQTEAAKSLGLNPWLTMRLVIFPQAFRRMLPPLGNEFISLL 431 Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 K++SL +GF +L G I+ +A EI +YL L+++ + ++RL Sbjct: 432 KDTSLVAVIGFEELFRKGQLIVADNYRAFEIYAAVAIVYLCLTLLASQVLSRLE 485 >gi|238790775|ref|ZP_04634534.1| Glutamate/aspartate transport system permease protein gltJ [Yersinia frederiksenii ATCC 33641] gi|238721133|gb|EEQ12814.1| Glutamate/aspartate transport system permease protein gltJ [Yersinia frederiksenii ATCC 33641] Length = 246 Score = 96.7 bits (239), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 51/129 (39%), Positives = 79/129 (61%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+S I L +TAA + E VR+G+ ++PRGQ A +A+GLT + R VLLP A R IIP Sbjct: 111 FLSSMICLGLFTAARVCEQVRAGIQSLPRGQKAAGLAMGLTLPQTYRYVLLPNAYRVIIP 170 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 P+TS+ LNL+KNS++A +G D+ + G +++ + A E Y+ ++ +I L M Sbjct: 171 PMTSEMLNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAYESFTAITIGYVLINAVIMLLM 230 Query: 386 NRLNAKIAL 394 + K+ L Sbjct: 231 RLVEKKVQL 239 Score = 43.5 bits (101), Expect = 0.054, Method: Compositional matrix adjust. Identities = 38/131 (29%), Positives = 60/131 (45%), Gaps = 19/131 (14%) Query: 81 SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140 +++Y I GF T L+ + A +G+L G R N++++ I YVE+FRN+P Sbjct: 17 GNTTYFGWIWSGFQVTVALSLCAWVIAFFVGSLFGILRTVPNRILSGIGTCYVELFRNVP 76 Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200 +V F Y V +LP+ GM+ + +D N + F+ S I L Sbjct: 77 LIVQFFTWYLVVPELLPV-------DIGMWFKSE--------LDPNIQFFLSSM---ICL 118 Query: 201 SLF-ATRLSRH 210 LF A R+ Sbjct: 119 GLFTAARVCEQ 129 >gi|295096602|emb|CBK85692.1| L-glutamate ABC transporter membrane protein/L-aspartate ABC transporter membrane protein [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 246 Score = 96.7 bits (239), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 50/129 (38%), Positives = 80/129 (62%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+S + L +TAA + E VR+ + ++PRGQ AA+A+GLT +A R VLLP A R I+P Sbjct: 111 FVSSMLCLGLFTAARVCEQVRAAIQSLPRGQKNAALAMGLTLPQAYRYVLLPNAYRVIVP 170 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 P+TS+ +NL+KNS++A +G D+ + G +++ + A E Y+ ++ I L M Sbjct: 171 PMTSEMMNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAWESFTAITLAYVLINAFIMLVM 230 Query: 386 NRLNAKIAL 394 N + K+ L Sbjct: 231 NLVERKVRL 239 Score = 42.0 bits (97), Expect = 0.16, Method: Compositional matrix adjust. Identities = 37/131 (28%), Positives = 61/131 (46%), Gaps = 19/131 (14%) Query: 81 SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140 +++Y + GF T L+ + I A ++G+L G R N+ ++ I +YVE+FRN+P Sbjct: 17 GNTTYLGWLWSGFQVTVALSITAWIIAFLVGSLFGILRTVPNRFLSSIGTLYVELFRNVP 76 Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200 +V F Y + +LP + G+ F +D N + FV S + L Sbjct: 77 LIVQFFTWYLVIPELLP--------------EDLGMWFKA-ELDPNVQFFVSSM---LCL 118 Query: 201 SLF-ATRLSRH 210 LF A R+ Sbjct: 119 GLFTAARVCEQ 129 >gi|323701355|ref|ZP_08113029.1| polar amino acid ABC transporter, inner membrane subunit [Desulfotomaculum nigrificans DSM 574] gi|323533614|gb|EGB23479.1| polar amino acid ABC transporter, inner membrane subunit [Desulfotomaculum nigrificans DSM 574] Length = 223 Score = 96.3 bits (238), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 56/174 (32%), Positives = 106/174 (60%), Gaps = 13/174 (7%) Query: 226 TFLIFGLPTLV-LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284 T++I G+P L+ L+ L Y L F +L +F TV+ + LS A+IAEI Sbjct: 62 TWVIRGVPLLLQLMFLYYGLAFAGIMLDEF------TVA------VLGLSVCGGAYIAEI 109 Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344 +R+G++++ RGQMEAA+++G+T+ +A R V+LPQA R ++PP+ ++++ L+K+S+L + Sbjct: 110 IRAGILSIDRGQMEAALSMGMTYAQAMRRVILPQAYRRLLPPMGNEFITLMKDSALVSVI 169 Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 +L+ + + T + +E+ + +YL ++ + +RL K+A+ + K Sbjct: 170 TMTELLRSATQLQSVTFRPVEVYITAGLLYLIMTTFFTIVFDRLERKLAVSDGK 223 Score = 37.0 bits (84), Expect = 5.2, Method: Compositional matrix adjust. Identities = 21/61 (34%), Positives = 35/61 (57%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G V T L ++ T+IG +V ++S+ K++ WI +Y V R +P L+ + FL Sbjct: 18 LLKGAVMTIKLTAFAIVFGTLIGLIVALAKISSIKILNWIGGLYTWVIRGVPLLLQLMFL 77 Query: 149 Y 149 Y Sbjct: 78 Y 78 >gi|253687585|ref|YP_003016775.1| polar amino acid ABC transporter, inner membrane subunit [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251754163|gb|ACT12239.1| polar amino acid ABC transporter, inner membrane subunit [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 246 Score = 96.3 bits (238), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 51/129 (39%), Positives = 78/129 (60%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+S I L +TAA + E VR+G+ ++PRGQ A +A+GLT + R VLLP A R I+P Sbjct: 111 FLSSMICLGLFTAARVCEQVRAGIQSLPRGQKAAGLAMGLTLPQTYRYVLLPNAYRVIVP 170 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PLTS+ LNL+KNS++A +G D+ + G +++ + A E Y+ ++ +I L M Sbjct: 171 PLTSEMLNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAYESFTAITLAYVGINAIIMLIM 230 Query: 386 NRLNAKIAL 394 + K L Sbjct: 231 QIVERKTRL 239 Score = 45.1 bits (105), Expect = 0.023, Method: Compositional matrix adjust. Identities = 29/77 (37%), Positives = 41/77 (53%) Query: 81 SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140 +++Y IL G T L+ I A ++G+L G R N+ VA I YVE+FRN+P Sbjct: 17 GNTTYLGWILSGLQVTVTLSICAWIIAFLVGSLFGILRTVPNRFVAGIGTCYVELFRNVP 76 Query: 141 PLVVIFFLYKSVLSVLP 157 +V F Y V +LP Sbjct: 77 LIVQFFTWYLVVPELLP 93 >gi|330448488|ref|ZP_08312136.1| amino ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328492679|dbj|GAA06633.1| amino ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 272 Score = 96.3 bits (238), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 66/187 (35%), Positives = 100/187 (53%), Gaps = 21/187 (11%) Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240 +T+ +A +F+ + G++ T L R H G+ L YI LI P LV I L Sbjct: 75 ITLKISAISLIFTVLFGLI-----TALLRVSHSVVGRGLARGYIE--LIRNTPLLVQIYL 127 Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPE-FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299 Y F+ G + E F + +ALS + A+ AEI R+GLI +P+GQ EA Sbjct: 128 LY-------------FVFGPMLGLERFTTAVLALSLFQGAYTAEIFRAGLINIPKGQFEA 174 Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359 A +LGL+ + R ++LPQ +R I+PPLT++ ++L+KNSS+ + DL + G I+ Sbjct: 175 AESLGLSKMDSYRYIILPQMLRRILPPLTNEAVSLVKNSSIVSIMAIFDLTTQGRDIVAD 234 Query: 360 TGQAIEI 366 T EI Sbjct: 235 TAMPFEI 241 >gi|169831297|ref|YP_001717279.1| polar amino acid ABC transporter, inner membrane subunit [Candidatus Desulforudis audaxviator MP104C] gi|169638141|gb|ACA59647.1| polar amino acid ABC transporter, inner membrane subunit [Candidatus Desulforudis audaxviator MP104C] Length = 235 Score = 96.3 bits (238), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 71/221 (32%), Positives = 119/221 (53%), Gaps = 17/221 (7%) Query: 188 KIFVFSFVLGIVLSLFA--TRLSRHF---HEKTG-----KALPLLYISTFLIFGLPTLVL 237 +I V S G ++ LFA RLSR + TG + PLL L FG+P +V Sbjct: 20 QITVLSVGFGCIIGLFAGLCRLSRSRVLRYLATGYVDFFRGTPLLVQIFMLYFGMPQVVE 79 Query: 238 IALKYQLH-FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296 + Y L+ + P + S VS ++++ + S + A+IAEI R+G+ ++ RGQ Sbjct: 80 MLQLYLLNEYGIP-----KMVDVSNVSRYWIAV-LGCSLNSGAYIAEIFRAGVQSIERGQ 133 Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356 MEAA +LG+T +A R V+LPQA + +IPPL ++++ +LK++SL +G +L G I Sbjct: 134 MEAARSLGMTQNQAMRYVILPQAFKRVIPPLGNEFIAMLKDTSLLSVIGVEELTRKGQLI 193 Query: 357 INQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 I Q+ I IYL +++ + ++ L ++ ++ Sbjct: 194 IAVNYQSAAIWFAVAMIYLLMTLTFSRIVDWLERRLKTDDR 234 Score = 37.0 bits (84), Expect = 5.8, Method: Compositional matrix adjust. Identities = 23/61 (37%), Positives = 33/61 (54%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +LVG TF + + IIG G RLS ++++ ++ YV+ FR P LV IF L Sbjct: 11 LLVGAKLTFQITVLSVGFGCIIGLFAGLCRLSRSRVLRYLATGYVDFFRGTPLLVQIFML 70 Query: 149 Y 149 Y Sbjct: 71 Y 71 >gi|91789745|ref|YP_550697.1| amino acid ABC transporter permease [Polaromonas sp. JS666] gi|91698970|gb|ABE45799.1| amino acid ABC transporter membrane protein 1, PAAT family [Polaromonas sp. JS666] Length = 240 Score = 96.3 bits (238), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 57/135 (42%), Positives = 83/135 (61%), Gaps = 7/135 (5%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P F+ + AL +T+A IAE VR+G+ A+PRGQ A +A+G T + R V+LP A+R I Sbjct: 97 PGFVLVVFALGFFTSARIAEQVRAGVQALPRGQRYAGMAMGFTTAQTYRYVILPMAIRII 156 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 IPPLTS+ +NLLKNSS+A AV A+L +T + +E IYL+++ + A+ Sbjct: 157 IPPLTSESMNLLKNSSVAFAVSIAELTMFAMQAQEETSRGVE-------IYLAVTALYAV 209 Query: 384 FMNRLNAKIALKEKK 398 +N +A EKK Sbjct: 210 SAFTVNRIMAFIEKK 224 >gi|329766800|ref|ZP_08258330.1| hypothetical protein HMPREF0428_00027 [Gemella haemolysans M341] gi|328839311|gb|EGF88893.1| hypothetical protein HMPREF0428_00027 [Gemella haemolysans M341] Length = 213 Score = 96.3 bits (238), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 61/183 (33%), Positives = 109/183 (59%), Gaps = 11/183 (6%) Query: 216 GKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG------GSTVSPEFMSL 269 G + L ISTF + ++ A+ ++ + P+L Q I G + +P FMS Sbjct: 34 GIVICLAKISTFKVLN----IIAAIYVEVIRNTPILVQIMIIYFALPEIGISFTP-FMSA 88 Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329 IALS + A+++EI RSG++A+ +GQMEA +LGL++ + +L++LPQA+++ +P L + Sbjct: 89 IIALSINSGAYVSEIFRSGILAIDKGQMEAGRSLGLSYFQTMKLIILPQALKNSLPALGN 148 Query: 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 ++++L+K SS+ VG AD++ T+ N T Q L+ IY ++ +++L + RL Sbjct: 149 EFISLVKESSIVYFVGVADIMFTANTVKNATYQTFGPYLVAAAIYFIITSILSLLVKRLE 208 Query: 390 AKI 392 K+ Sbjct: 209 KKL 211 >gi|327460181|gb|EGF06518.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK1057] Length = 729 Score = 96.3 bits (238), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 61/209 (29%), Positives = 110/209 (52%), Gaps = 23/209 (11%) Query: 190 FVFSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243 F + ++GI+ +F+ R + +PL+ ++ F+ +G+P L+ Sbjct: 537 FAIAMIIGIIFGMFSVSPYKPLRWIAEIFVDVIRGIPLMIVAAFIFWGIPNLI------- 589 Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 + + GQ + I F++ IALS A+IAEIVR G+ AVP GQMEA+ +L Sbjct: 590 ----ESMTGQQSPINA------FVAGTIALSLNAGAYIAEIVRGGIQAVPVGQMEASRSL 639 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363 G+++ K R ++LPQA + ++P +Q++ LK++++ A+G A+L G II + Q+ Sbjct: 640 GISYSKTMRKIILPQATKIMLPNFVNQFVIALKDTTIVSAIGLAELFKTGKDIIARNYQS 699 Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392 + I +YL + ++ RL +I Sbjct: 700 FRMYAILAVLYLIIITLLTRLAKRLEKRI 728 >gi|291295431|ref|YP_003506829.1| polar amino acid ABC transporter inner membrane subunit [Meiothermus ruber DSM 1279] gi|290470390|gb|ADD27809.1| polar amino acid ABC transporter, inner membrane subunit [Meiothermus ruber DSM 1279] Length = 216 Score = 96.3 bits (238), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 70/204 (34%), Positives = 110/204 (53%), Gaps = 13/204 (6%) Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247 +I S V GI+L L+R + L L YI L+ G P LV I L + F Sbjct: 22 RITALSLVFGILLGTLVA-LARMSPLRWLSGLTLGYIE--LLRGTPLLVQIFL---IFFG 75 Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307 P L Q EF + IA S ++A++AEI+R+G+ ++P+GQ EAA++LG + Sbjct: 76 IPQLTQQQI-------NEFAAGVIAFSINSSAYVAEILRAGIQSIPKGQREAALSLGFSP 128 Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367 + R ++LPQA +IPPL ++ + LLKNSSL A+ +L G I +T + E+ Sbjct: 129 TQTLRYIILPQAFTRVIPPLVNEGITLLKNSSLLSAIAVVELTRAGQLISARTFKPFEMY 188 Query: 368 LIWMFIYLSLSIMIALFMNRLNAK 391 L IYL+++++++ RL + Sbjct: 189 LAVSLIYLTMTLVLSFVARRLERR 212 >gi|167570000|ref|ZP_02362874.1| binding-protein-dependent transport system inner membrane component [Burkholderia oklahomensis C6786] Length = 241 Score = 96.3 bits (238), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 47/96 (48%), Positives = 65/96 (67%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 EF++ ++ LSCYT+AF+AE +GL VP GQ AA ALGL + R V+LPQA+R + Sbjct: 107 EFVAGWVGLSCYTSAFVAEEFHAGLRGVPAGQYHAASALGLAPLQTLRFVVLPQAVRIAL 166 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 PPL QY+NL+KNSSL +A+G A+L + +T Sbjct: 167 PPLFGQYMNLIKNSSLTMAIGVAELSYASRQVETET 202 >gi|205351950|ref|YP_002225751.1| glutamate/aspartate transport system permease GltJ [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205271731|emb|CAR36564.1| glutamate/aspartate transport system permease protein GltJ [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|326626989|gb|EGE33332.1| glutamate/aspartate transport system permease protein GltJ [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 246 Score = 96.3 bits (238), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 50/129 (38%), Positives = 81/129 (62%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+S I L +TAA + E VR+ + ++PRGQ AA+A+GLT +A R VLLP A R I+P Sbjct: 111 FLSSMICLGLFTAARVCEQVRAAIQSLPRGQKNAALAMGLTLPQAYRYVLLPNAYRVIVP 170 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 P+TS+ +NL+KNS++A +G D+ + G +++ + A E Y+ ++ +I L M Sbjct: 171 PMTSEMMNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAWESFTAITLAYVLINAVIMLVM 230 Query: 386 NRLNAKIAL 394 + + K+ L Sbjct: 231 SLVERKVRL 239 Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust. Identities = 23/76 (30%), Positives = 43/76 (56%) Query: 82 DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141 +++Y + GF T L+ + I A ++G++ G R ++ ++ + +YVE+FRN+P Sbjct: 18 NTTYLGWLWSGFQVTVALSITAWIIAFLVGSIFGILRTVPDRFLSGLGTLYVELFRNVPL 77 Query: 142 LVVIFFLYKSVLSVLP 157 +V F Y V +LP Sbjct: 78 IVQFFTWYLVVPELLP 93 >gi|331702184|ref|YP_004399143.1| polar amino acid ABC transporter inner membrane subunit [Lactobacillus buchneri NRRL B-30929] gi|329129527|gb|AEB74080.1| polar amino acid ABC transporter, inner membrane subunit [Lactobacillus buchneri NRRL B-30929] Length = 212 Score = 96.3 bits (238), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 58/129 (44%), Positives = 83/129 (64%), Gaps = 2/129 (1%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F S I L Y++AFIAE VRSG+ +V GQME A A GL+ +A R ++LPQA R +IP Sbjct: 85 FASGTIGLILYSSAFIAETVRSGIQSVDPGQMEGARANGLSFWQAMRYIVLPQAFRYVIP 144 Query: 326 PLTSQYLNLLKNSS-LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 PL +Q++NL+KNSS LA GF DL+ G I + + Q++ L +YL L++ ++ + Sbjct: 145 PLGNQFINLVKNSSVLAFVAGF-DLMYQGNVIASDSLQSMSTYLCVGVLYLILTLPLSYY 203 Query: 385 MNRLNAKIA 393 M L K+A Sbjct: 204 MRYLEKKLA 212 Score = 37.4 bits (85), Expect = 3.9, Method: Compositional matrix adjust. Identities = 17/28 (60%), Positives = 19/28 (67%) Query: 122 NKLVAWICRVYVEVFRNIPPLVVIFFLY 149 NK I RVY+EVFRNIP LV+ F Y Sbjct: 45 NKFFRVIARVYIEVFRNIPLLVITMFFY 72 >gi|90414856|ref|ZP_01222822.1| putative amino acid ABC transporter, permease protein [Photobacterium profundum 3TCK] gi|90324034|gb|EAS40625.1| putative amino acid ABC transporter, permease protein [Photobacterium profundum 3TCK] Length = 275 Score = 96.3 bits (238), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 75/215 (34%), Positives = 113/215 (52%), Gaps = 21/215 (9%) Query: 178 FPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVL 237 F TL + T + +F+ ++G+V +L RLS G+ L YI LI P LV Sbjct: 77 FVTLKISTVS--LIFTLIIGLVTALL--RLSGSI---VGRGLARGYIE--LIRNTPLLVQ 127 Query: 238 IALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQM 297 I L Y + PVLG F + +ALS + A+ AEI R+GL +P+GQ Sbjct: 128 IYLLYFVF--GPVLGL----------ERFTTAVLALSLFQGAYTAEIFRAGLNNIPKGQF 175 Query: 298 EAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII 357 EA +LGL+ R V+LPQ +R I+PPLT++ ++L+KNSS+ + DL + G I+ Sbjct: 176 EACSSLGLSAIDGYRFVILPQMIRRILPPLTNETVSLVKNSSIVSIMAIFDLTTEGRNIV 235 Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 T E+ IYL +++M++ F L K+ Sbjct: 236 ADTAMPFEVWFTVAGIYLCVTLMLSGFAAWLEHKM 270 >gi|313887599|ref|ZP_07821282.1| putative arginine ABC transporter, permease protein ArtQ [Peptoniphilus harei ACS-146-V-Sch2b] gi|312846477|gb|EFR33855.1| putative arginine ABC transporter, permease protein ArtQ [Peptoniphilus harei ACS-146-V-Sch2b] Length = 224 Score = 96.3 bits (238), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 64/203 (31%), Positives = 115/203 (56%), Gaps = 13/203 (6%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 + F LG++L+L + F+ L +YI ++ G P LV I + Y K + Sbjct: 33 ILGFTLGVILALMKISKLKIFN-----ILSSVYIE--IVRGTPMLVQIMIVY-FGLKKII 84 Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 QF + +P F+ +++S +AA+IAEI+RSG+ +V GQMEAA +LGL ++A Sbjct: 85 PEQFTLL----TAPMFLCA-LSISLNSAAYIAEIIRSGISSVDYGQMEAARSLGLNEKQA 139 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370 R +++PQA+++I+P L ++++ L+K SS+ VG +L+ G +I + T + + + Sbjct: 140 MRKIIMPQAIKNILPALVNEFITLIKESSITYTVGVGELMYAGKSISSGTFELVRPFIFT 199 Query: 371 MFIYLSLSIMIALFMNRLNAKIA 393 IY ++ ++ M RL ++A Sbjct: 200 ACIYFIMTFSLSKAMGRLERRLA 222 >gi|16759616|ref|NP_455233.1| glutamate/aspartate transport system permease GltJ [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|16764041|ref|NP_459656.1| glutamate/aspartate transporter [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|29142611|ref|NP_805953.1| glutamate/aspartate transport system permease GltJ [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|56414207|ref|YP_151282.1| glutamate/aspartate transport system permease GltJ [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|62179262|ref|YP_215679.1| glutamate/aspartate ABC transporter [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|161615118|ref|YP_001589083.1| hypothetical protein SPAB_02886 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|167550798|ref|ZP_02344554.1| glutamate/aspartate ABC transporter, permease protein GltJ [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|167990673|ref|ZP_02571773.1| glutamate/aspartate ABC transporter, permease protein GltJ [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|168231679|ref|ZP_02656737.1| glutamate/aspartate ABC transporter, permease protein GltJ [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|168236651|ref|ZP_02661709.1| glutamate/aspartate ABC transporter, permease protein GltJ [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|168240513|ref|ZP_02665445.1| glutamate/aspartate ABC transporter, permease protein GltJ [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|168264403|ref|ZP_02686376.1| glutamate/aspartate ABC transporter, permease protein GltJ [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|168465841|ref|ZP_02699723.1| glutamate/aspartate ABC transporter, permease protein GltJ [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|168820211|ref|ZP_02832211.1| glutamate/aspartate ABC transporter, permease protein GltJ [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|194445140|ref|YP_002039907.1| glutamate/aspartate ABC transporter permease protein GltJ [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194448493|ref|YP_002044699.1| glutamate/aspartate ABC transporter permease GltJ [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194470878|ref|ZP_03076862.1| glutamate/aspartate ABC transporter, permease protein GltJ [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194734571|ref|YP_002113775.1| glutamate/aspartate ABC transporter permease GltJ [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197251810|ref|YP_002145640.1| glutamate/aspartate ABC transporter permease GltJ [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197261867|ref|ZP_03161941.1| glutamate/aspartate ABC transporter, permease protein GltJ [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|198242331|ref|YP_002214652.1| glutamate/aspartate ABC transporter permease GltJ [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|200389956|ref|ZP_03216567.1| glutamate/aspartate ABC transporter, permease protein GltJ [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204930566|ref|ZP_03221496.1| glutamate/aspartate ABC transporter, permease protein GltJ [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|207856129|ref|YP_002242780.1| glutamate/aspartate transport system permease GltJ [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|213425079|ref|ZP_03357829.1| glutamate/aspartate transport system permease protein GltJ [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213580533|ref|ZP_03362359.1| glutamate/aspartate transport system permease protein GltJ [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] gi|213609636|ref|ZP_03369462.1| glutamate/aspartate transport system permease protein GltJ [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] gi|213647481|ref|ZP_03377534.1| glutamate/aspartate transport system permease protein GltJ [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|224582499|ref|YP_002636297.1| glutamate/aspartate transport system permease GltJ [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|238911615|ref|ZP_04655452.1| glutamate/aspartate transport system permease protein GltJ [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|289805230|ref|ZP_06535859.1| glutamate/aspartate ABC transporter, permease protein GltJ [Salmonella enterica subsp. enterica serovar Typhi str. AG3] gi|289823920|ref|ZP_06543520.1| glutamate/aspartate ABC transporter, permease protein GltJ [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|25296624|pir||AE0583 glutamate/aspartate transport system permease protein GltJ STY0709 [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16419177|gb|AAL19615.1| glutamate/aspartate transporter [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|16501908|emb|CAD05135.1| glutamate/aspartate transport system permease protein GltJ [Salmonella enterica subsp. enterica serovar Typhi] gi|29138242|gb|AAO69813.1| glutamate/aspartate transport system permease protein GltJ [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|56128464|gb|AAV77970.1| glutamate/aspartate transport system permease protein GltJ [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|62126895|gb|AAX64598.1| ABC superfamily (membrane), glutamate/aspartate transporter [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|161364482|gb|ABX68250.1| hypothetical protein SPAB_02886 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194403803|gb|ACF64025.1| glutamate/aspartate ABC transporter, permease protein GltJ [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194406797|gb|ACF67016.1| glutamate/aspartate ABC transporter, permease protein GltJ [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194457242|gb|EDX46081.1| glutamate/aspartate ABC transporter, permease protein GltJ [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194710073|gb|ACF89294.1| glutamate/aspartate ABC transporter, permease protein GltJ [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|195631650|gb|EDX50170.1| glutamate/aspartate ABC transporter, permease protein GltJ [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197215513|gb|ACH52910.1| glutamate/aspartate ABC transporter, permease protein GltJ [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197240122|gb|EDY22742.1| glutamate/aspartate ABC transporter, permease protein GltJ [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197290414|gb|EDY29770.1| glutamate/aspartate ABC transporter, permease protein GltJ [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|197936847|gb|ACH74180.1| glutamate/aspartate ABC transporter, permease protein GltJ [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|199602401|gb|EDZ00947.1| glutamate/aspartate ABC transporter, permease protein GltJ [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204320500|gb|EDZ05703.1| glutamate/aspartate ABC transporter, permease protein GltJ [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205324294|gb|EDZ12133.1| glutamate/aspartate ABC transporter, permease protein GltJ [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205330904|gb|EDZ17668.1| glutamate/aspartate ABC transporter, permease protein GltJ [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205334014|gb|EDZ20778.1| glutamate/aspartate ABC transporter, permease protein GltJ [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|205339997|gb|EDZ26761.1| glutamate/aspartate ABC transporter, permease protein GltJ [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205343175|gb|EDZ29939.1| glutamate/aspartate ABC transporter, permease protein GltJ [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205347134|gb|EDZ33765.1| glutamate/aspartate ABC transporter, permease protein GltJ [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|206707932|emb|CAR32221.1| glutamate/aspartate transport system permease protein GltJ [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|224467026|gb|ACN44856.1| glutamate/aspartate transport system permease protein GltJ [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|261245936|emb|CBG23738.1| glutamate/aspartate transport system permease protein GltJ [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267992398|gb|ACY87283.1| glutamate/aspartate transporter [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301157264|emb|CBW16752.1| glutamate/aspartate transport system permease protein GltJ [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312911696|dbj|BAJ35670.1| glutamate/aspartate ABC transporter permease protein GltJ [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|320084937|emb|CBY94726.1| Octopine transport system permease protein occM [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|321226243|gb|EFX51294.1| Glutamate Aspartate transport system permease protein GltJ [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|322613210|gb|EFY10153.1| glutamate/aspartate ABC transporter, permease protein GltJ [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322621278|gb|EFY18135.1| glutamate/aspartate ABC transporter, permease protein GltJ [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322623698|gb|EFY20536.1| glutamate/aspartate ABC transporter, permease protein GltJ [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322628970|gb|EFY25749.1| glutamate/aspartate ABC transporter, permease protein GltJ [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322631692|gb|EFY28446.1| glutamate/aspartate ABC transporter, permease protein GltJ [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322637572|gb|EFY34274.1| glutamate/aspartate ABC transporter, permease protein GltJ [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322641912|gb|EFY38542.1| glutamate/aspartate ABC transporter, permease protein GltJ [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322646756|gb|EFY43262.1| glutamate/aspartate ABC transporter, permease protein GltJ [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322651457|gb|EFY47837.1| glutamate/aspartate ABC transporter, permease protein GltJ [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322653092|gb|EFY49426.1| glutamate/aspartate ABC transporter, permease protein GltJ [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322658812|gb|EFY55067.1| glutamate/aspartate ABC transporter, permease protein GltJ [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322664918|gb|EFY61111.1| glutamate/aspartate ABC transporter, permease protein GltJ [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322668920|gb|EFY65072.1| glutamate/aspartate ABC transporter, permease protein GltJ [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322670574|gb|EFY66707.1| glutamate/aspartate ABC transporter, permease protein GltJ [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322675315|gb|EFY71391.1| glutamate/aspartate ABC transporter, permease protein GltJ [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322682214|gb|EFY78239.1| glutamate/aspartate ABC transporter, permease protein GltJ [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322684957|gb|EFY80954.1| glutamate/aspartate ABC transporter, permease protein GltJ [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|322713728|gb|EFZ05299.1| glutamate/aspartate transport system permease protein GltJ [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] gi|323128981|gb|ADX16411.1| glutamate/aspartate transport system permease protein GltJ [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|323193985|gb|EFZ79187.1| glutamate/aspartate ABC transporter, permease protein GltJ [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323197923|gb|EFZ83045.1| glutamate/aspartate ABC transporter, permease protein GltJ [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323202030|gb|EFZ87090.1| glutamate/aspartate ABC transporter, permease protein GltJ [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323207163|gb|EFZ92116.1| glutamate/aspartate ABC transporter, permease protein GltJ [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323210930|gb|EFZ95793.1| glutamate/aspartate ABC transporter, permease protein GltJ [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323214310|gb|EFZ99061.1| glutamate/aspartate ABC transporter, permease protein GltJ [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323219285|gb|EGA03776.1| glutamate/aspartate ABC transporter, permease protein GltJ [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323225504|gb|EGA09734.1| glutamate/aspartate ABC transporter, permease protein GltJ [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323231063|gb|EGA15179.1| glutamate/aspartate ABC transporter, permease protein GltJ [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323234105|gb|EGA18194.1| glutamate/aspartate ABC transporter, permease protein GltJ [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323238200|gb|EGA22258.1| glutamate/aspartate ABC transporter, permease protein GltJ [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323242566|gb|EGA26590.1| glutamate/aspartate ABC transporter, permease protein GltJ [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323248457|gb|EGA32391.1| glutamate/aspartate ABC transporter, permease protein GltJ [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323251328|gb|EGA35200.1| glutamate/aspartate ABC transporter, permease protein GltJ [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323259256|gb|EGA42899.1| glutamate/aspartate ABC transporter, permease protein GltJ [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323264845|gb|EGA48346.1| glutamate/aspartate ABC transporter, permease protein GltJ [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323272318|gb|EGA55725.1| glutamate/aspartate ABC transporter, permease protein GltJ [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] gi|326622407|gb|EGE28752.1| glutamate/aspartate transport system permease protein GltJ [Salmonella enterica subsp. enterica serovar Dublin str. 3246] Length = 246 Score = 96.3 bits (238), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 50/129 (38%), Positives = 81/129 (62%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+S I L +TAA + E VR+ + ++PRGQ AA+A+GLT +A R VLLP A R I+P Sbjct: 111 FLSSMICLGLFTAARVCEQVRAAIQSLPRGQKNAALAMGLTLPQAYRYVLLPNAYRVIVP 170 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 P+TS+ +NL+KNS++A +G D+ + G +++ + A E Y+ ++ +I L M Sbjct: 171 PMTSEMMNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAWESFTAITLAYVLINAVIMLVM 230 Query: 386 NRLNAKIAL 394 + + K+ L Sbjct: 231 SLVERKVRL 239 Score = 40.4 bits (93), Expect = 0.46, Method: Compositional matrix adjust. Identities = 24/76 (31%), Positives = 43/76 (56%) Query: 82 DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141 +++Y + GF T L+ + I A ++G++ G R N+ ++ + +YVE+FRN+P Sbjct: 18 NTTYLGWLWSGFQVTVALSITAWIIAFLVGSIFGILRTVPNRFLSGLGTLYVELFRNVPL 77 Query: 142 LVVIFFLYKSVLSVLP 157 +V F Y V +LP Sbjct: 78 IVQFFTWYLVVPELLP 93 >gi|238752606|ref|ZP_04614079.1| Glutamate/aspartate transport system permease protein gltJ [Yersinia rohdei ATCC 43380] gi|238709197|gb|EEQ01442.1| Glutamate/aspartate transport system permease protein gltJ [Yersinia rohdei ATCC 43380] Length = 246 Score = 96.3 bits (238), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 51/129 (39%), Positives = 79/129 (61%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+S I L +TAA + E VR+G+ ++PRGQ A +A+GLT + R VLLP A R IIP Sbjct: 111 FLSSMICLGLFTAARVCEQVRAGIQSLPRGQKAAGLAMGLTLPQTYRYVLLPNAYRVIIP 170 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 P+TS+ LNL+KNS++A +G D+ + G +++ + A E Y+ ++ +I L M Sbjct: 171 PMTSEMLNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAYESFTAITLGYVLINAVIMLLM 230 Query: 386 NRLNAKIAL 394 + K+ L Sbjct: 231 RLVEKKVQL 239 Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust. Identities = 39/131 (29%), Positives = 61/131 (46%), Gaps = 19/131 (14%) Query: 81 SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140 +++Y I GF T L+ + A +IG+L G R N++++ I YVE+FRN+P Sbjct: 17 GNTTYLGWIWAGFQVTVALSLCAWVIAFLIGSLFGILRTVPNRILSGIGACYVELFRNVP 76 Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200 +V F Y V +LP+ GM+ + +D N + F+ S I L Sbjct: 77 LIVQFFTWYLVVPELLPV-------DIGMWFKSE--------LDPNIQFFLSSM---ICL 118 Query: 201 SLF-ATRLSRH 210 LF A R+ Sbjct: 119 GLFTAARVCEQ 129 >gi|317048166|ref|YP_004115814.1| polar amino acid ABC transporter inner membrane subunit [Pantoea sp. At-9b] gi|316949783|gb|ADU69258.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea sp. At-9b] Length = 223 Score = 96.3 bits (238), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 56/170 (32%), Positives = 104/170 (61%), Gaps = 13/170 (7%) Query: 225 STFLIF--GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282 +++++F G P LV + + L+F P FN V P F+ I L CY+AA+++ Sbjct: 58 NSYVVFVRGTPLLVQL---FILYFGLP---YFNI-----VIPAFVCGIIGLGCYSAAYVS 106 Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342 E+VR ++++ RGQ EAA ++G++ +A RL++LPQA+ ++PPL ++++ L KNS+L Sbjct: 107 ELVRGAILSIDRGQSEAARSMGMSAAQAMRLIILPQALVRMVPPLANEFIALTKNSALVS 166 Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 V DL+ G +I+ + +++E+ ++ FIYL ++ L + + K+ Sbjct: 167 LVTIHDLMHEGQKVISVSYRSLEVYIVIAFIYLLMTSSTMLLLRVVEKKL 216 Score = 42.7 bits (99), Expect = 0.11, Method: Compositional matrix adjust. Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 7/79 (8%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN-KLVAWICRVYVEVFRNIPPLVVIFF 147 +L G T + ++ + +GTL+G GRL+ KLV W+C YV R P LV +F Sbjct: 16 LLSGAWVTIEVTLCALLISCCLGTLIGLGRLTPQRKLVWWLCNSYVVFVRGTPLLVQLFI 75 Query: 148 LYKSVLSVLPIPDHSIVLP 166 LY +P +IV+P Sbjct: 76 LY------FGLPYFNIVIP 88 >gi|292558363|gb|ADE31364.1| Amino acid ABC transporter,3-TM region containing permease protein [Streptococcus suis GZ1] Length = 250 Score = 96.3 bits (238), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 66/216 (30%), Positives = 115/216 (53%), Gaps = 25/216 (11%) Query: 168 GMFLNNRG--LSFPTLTMDTNAKIFVFSFVLGIVLSLFAT------RLSRHFHEKTGKAL 219 G+ NN G LS +T+ F + V+GI+ +FA R++ + + Sbjct: 34 GLLKNNYGQLLSGLGITIGLALLSFAIAIVIGIIFGMFAVSPVKALRVTSSVFVDVVRGI 93 Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279 PL+ ++ F+ +G+P L+ + + GQ + I +F++ IALS + A Sbjct: 94 PLMIVAAFIFWGIPNLI-----------ESMTGQQSPIN------DFVAGTIALSLNSGA 136 Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339 +IAEIVR G+ AVP GQMEA+ +LG+++ R ++LPQA + ++P +Q++ LK+++ Sbjct: 137 YIAEIVRGGIQAVPAGQMEASRSLGISYGTTMRKIILPQAGKIMLPNFINQFVITLKDTT 196 Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375 + A+G +L G II + Q+ + I IYL Sbjct: 197 IISAIGLVELFQAGKIIIARNYQSFRMYAILAIIYL 232 >gi|271502695|ref|YP_003335721.1| polar amino acid ABC transporter inner membrane subunit [Dickeya dadantii Ech586] gi|270346250|gb|ACZ79015.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya dadantii Ech586] Length = 248 Score = 96.3 bits (238), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 48/85 (56%), Positives = 64/85 (75%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 EF++ L+ Y+AAFIAE VR+G+ V RGQ AA ALGLT +A R V+LPQA+R + Sbjct: 116 EFLAGLFGLTLYSAAFIAEEVRAGIAGVARGQKYAACALGLTGWQAMRYVVLPQALRIAL 175 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADL 349 PPL QY+N++KNSSLA+A+G A+L Sbjct: 176 PPLLGQYMNVVKNSSLAMAIGVAEL 200 Score = 44.3 bits (103), Expect = 0.034, Method: Compositional matrix adjust. Identities = 25/74 (33%), Positives = 38/74 (51%) Query: 84 SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143 Y + GF T +A + ++ AT+ G ++ AGR S + + W Y +FRN P LV Sbjct: 19 QYLQWLWQGFQVTLGIAAATVVLATLSGLILAAGRDSGTRWLRWPVIAYCALFRNTPLLV 78 Query: 144 VIFFLYKSVLSVLP 157 +FF Y +LP Sbjct: 79 QLFFWYFGAAQLLP 92 >gi|330836706|ref|YP_004411347.1| amino acid ABC transporter membrane protein, PAAT family [Spirochaeta coccoides DSM 17374] gi|329748609|gb|AEC01965.1| amino acid ABC transporter membrane protein, PAAT family [Spirochaeta coccoides DSM 17374] Length = 289 Score = 96.3 bits (238), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 66/202 (32%), Positives = 119/202 (58%), Gaps = 19/202 (9%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 + S V+G++ L A SR + +G +Y+ LI G+P LV QL F Sbjct: 103 ILSVVIGVLAGLGAVSKSRVINLISG-----VYVE--LIRGIPLLV------QLIFIYFA 149 Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 +G+F + G ++ IAL A++ EI+R+G+ A+P+GQMEAAIALGLT +A Sbjct: 150 VGRFINVEG------VVAAIIALGICFGAYMGEIIRAGIQAIPKGQMEAAIALGLTRTQA 203 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370 R V+LPQ ++ ++P + ++++++LK+SSL + +D++ G I++T ++E +LI Sbjct: 204 FRSVILPQTIKIVLPAIGNEFISMLKDSSLVSTLALSDILRRGREYISRTFLSLETMLIV 263 Query: 371 MFIYLSLSIMIALFMNRLNAKI 392 IYL ++++++ + L ++ Sbjct: 264 ALIYLIITLVLSRLVGILEERL 285 Score = 42.0 bits (97), Expect = 0.19, Method: Compositional matrix adjust. Identities = 24/66 (36%), Positives = 38/66 (57%) Query: 87 TAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIF 146 T + G TF + +I + +IG L G G +S ++++ I VYVE+ R IP LV + Sbjct: 85 TVTVSGIPVTFQVTVFAIILSVVIGVLAGLGAVSKSRVINLISGVYVELIRGIPLLVQLI 144 Query: 147 FLYKSV 152 F+Y +V Sbjct: 145 FIYFAV 150 >gi|300811422|ref|ZP_07091918.1| ABC transporter, permease protein [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|300497657|gb|EFK32683.1| ABC transporter, permease protein [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] Length = 213 Score = 96.3 bits (238), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 57/127 (44%), Positives = 81/127 (63%), Gaps = 2/127 (1%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + I LS Y++AFIAE VRSG+ +V GQME A + G+T+ +A R V+LPQA R +IP Sbjct: 86 FQAGTIGLSIYSSAFIAETVRSGIQSVGTGQMEGARSNGMTYWQAMRYVILPQAFRIVIP 145 Query: 326 PLTSQYLNLLKNSS-LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 PL +Q +NL+KNSS LA GF DL+ G + + T Q I ++ YL L++ ++ + Sbjct: 146 PLGNQLVNLIKNSSILAFVAGF-DLMYQGDIVASNTFQTIPSYVLVSLFYLVLTLPLSYY 204 Query: 385 MNRLNAK 391 M L K Sbjct: 205 MQYLEKK 211 Score = 37.7 bits (86), Expect = 3.6, Method: Compositional matrix adjust. Identities = 23/63 (36%), Positives = 32/63 (50%) Query: 87 TAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIF 146 + L+GF NT + + + IIG+ NK + +VYVE+FRNIP LVV Sbjct: 10 STFLLGFWNTILCSLISLFFSLIIGSGFAILETVPNKFWRGVAKVYVEIFRNIPLLVVTM 69 Query: 147 FLY 149 Y Sbjct: 70 VFY 72 >gi|323262143|gb|EGA45705.1| glutamate/aspartate ABC transporter, permease protein GltJ [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] Length = 249 Score = 96.3 bits (238), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 50/129 (38%), Positives = 81/129 (62%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+S I L +TAA + E VR+ + ++PRGQ AA+A+GLT +A R VLLP A R I+P Sbjct: 111 FLSSMICLGLFTAARVCEQVRAAIQSLPRGQKNAALAMGLTLPQAYRYVLLPNAYRVIVP 170 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 P+TS+ +NL+KNS++A +G D+ + G +++ + A E Y+ ++ +I L M Sbjct: 171 PMTSEMMNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAWESFTAITLAYVLINAVIMLVM 230 Query: 386 NRLNAKIAL 394 + + K+ L Sbjct: 231 SLVERKVRL 239 Score = 40.8 bits (94), Expect = 0.43, Method: Compositional matrix adjust. Identities = 24/77 (31%), Positives = 43/77 (55%) Query: 81 SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140 +++Y + GF T L+ + I A ++G++ G R N+ ++ + +YVE+FRN+P Sbjct: 17 GNTTYLGWLWSGFQVTVALSITAWIIAFLVGSIFGILRTVPNRFLSGLGTLYVELFRNVP 76 Query: 141 PLVVIFFLYKSVLSVLP 157 +V F Y V +LP Sbjct: 77 LIVQFFTWYLVVPELLP 93 >gi|238853886|ref|ZP_04644249.1| ABC-type amino acid transport system, permease component [Lactobacillus gasseri 202-4] gi|238833472|gb|EEQ25746.1| ABC-type amino acid transport system, permease component [Lactobacillus gasseri 202-4] Length = 212 Score = 96.3 bits (238), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 73/203 (35%), Positives = 112/203 (55%), Gaps = 20/203 (9%) Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251 FS +LG+ +L K G+A+ +YI F +P LV+ + Y V+ Sbjct: 29 FSLILGVGFALLEVA-----PNKFGRAVAHVYIEIFR--NIPLLVITMIFYL------VV 75 Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311 Q F S F + I L+ YT+AFIAE VR+G+ +V GQME A + G+T+ +A Sbjct: 76 PQIWFKVSS-----FAAGTIGLTLYTSAFIAETVRAGINSVGDGQMEGARSNGMTYTQAM 130 Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSS-LAVAVGFADLVSVGGTIINQTGQAIEIILIW 370 R V+LPQA++ +IPPL +Q++NL+KNSS LA GF DL+ I + + I ++ Sbjct: 131 RYVILPQALKIVIPPLGNQFINLIKNSSVLAFVAGF-DLMYQADVIAFSSFETINTYVVV 189 Query: 371 MFIYLSLSIMIALFMNRLNAKIA 393 YL L++ ++ +M L K+A Sbjct: 190 GLFYLILTLPLSYYMRHLEKKLA 212 >gi|238755069|ref|ZP_04616417.1| Glutamate/aspartate transport system permease protein gltJ [Yersinia ruckeri ATCC 29473] gi|238706773|gb|EEP99142.1| Glutamate/aspartate transport system permease protein gltJ [Yersinia ruckeri ATCC 29473] Length = 246 Score = 95.9 bits (237), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 50/129 (38%), Positives = 79/129 (61%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+S + L +TAA + E VR+G+ ++PRGQ A +A+GLT + R VLLP A R IIP Sbjct: 111 FLSSMLCLGLFTAARVCEQVRAGIQSLPRGQKAAGLAMGLTLPQTYRYVLLPNAYRVIIP 170 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 P+TS+ LNL+KNS++A +G D+ + G +++ + A E Y+ ++ +I L M Sbjct: 171 PMTSEMLNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAYESFTAITLAYVLINAVIMLIM 230 Query: 386 NRLNAKIAL 394 + K+ L Sbjct: 231 RLVEKKVQL 239 Score = 43.9 bits (102), Expect = 0.042, Method: Compositional matrix adjust. Identities = 40/131 (30%), Positives = 59/131 (45%), Gaps = 19/131 (14%) Query: 81 SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140 +++Y I GF T L+ + A IG+L G R N+ +A + YVE+FRN+P Sbjct: 17 GNTTYLGWIWSGFQVTVALSLCAWVIAFFIGSLFGILRTVPNRFLAAMGTCYVELFRNVP 76 Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200 +V F Y V +LP N G+ F T +D N + F+ S + L Sbjct: 77 LIVQFFTWYLVVPELLP--------------TNIGMWFKT-ELDPNIQFFLSSM---LCL 118 Query: 201 SLF-ATRLSRH 210 LF A R+ Sbjct: 119 GLFTAARVCEQ 129 >gi|213419684|ref|ZP_03352750.1| glutamate/aspartate transport system permease protein GltJ [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 142 Score = 95.9 bits (237), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 50/129 (38%), Positives = 81/129 (62%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+S I L +TAA + E VR+ + ++PRGQ AA+A+GLT +A R VLLP A R I+P Sbjct: 7 FLSSMICLGLFTAARVCEQVRAAIQSLPRGQKNAALAMGLTLPQAYRYVLLPNAYRVIVP 66 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 P+TS+ +NL+KNS++A +G D+ + G +++ + A E Y+ ++ +I L M Sbjct: 67 PMTSEMMNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAWESFTAITLAYVLINAVIMLVM 126 Query: 386 NRLNAKIAL 394 + + K+ L Sbjct: 127 SLVERKVRL 135 >gi|254245481|ref|ZP_04938802.1| Glutamate/aspartate transport system permease protein [Burkholderia cenocepacia PC184] gi|124870257|gb|EAY61973.1| Glutamate/aspartate transport system permease protein [Burkholderia cenocepacia PC184] Length = 265 Score = 95.9 bits (237), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 49/98 (50%), Positives = 68/98 (69%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 EF++ ++ LS YTAAF+AE +GL V R Q +AA ALGLT ++ R V+LPQA+R + Sbjct: 131 EFVAGWVGLSAYTAAFVAEECEAGLRGVRRAQHDAAAALGLTPMQSLRYVVLPQAVRIAL 190 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362 PPL QY+NL+KNSSLA+A+G A+L + +T Q Sbjct: 191 PPLFGQYMNLVKNSSLAMAIGVAELSYASRQVETETFQ 228 >gi|42518677|ref|NP_964607.1| glutamine ABC transporter permease component [Lactobacillus johnsonii NCC 533] gi|41582963|gb|AAS08573.1| glutamine ABC transporter permease component [Lactobacillus johnsonii NCC 533] gi|329666942|gb|AEB92890.1| Glutamine transport system permease protein [Lactobacillus johnsonii DPC 6026] Length = 212 Score = 95.9 bits (237), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 72/207 (34%), Positives = 111/207 (53%), Gaps = 28/207 (13%) Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY----QLHFD 247 FS +LG+ +L K G+A+ +YI F +P LV+ + Y Q+ F Sbjct: 29 FSLILGVGFALLEVA-----PNKFGRAVAHVYIEIFR--NIPLLVITMIFYLVVPQIWFK 81 Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307 F G+ I L+ YT+AFIAE VR+G+ +V GQME A + G+T+ Sbjct: 82 VS-----GFAAGT----------IGLTLYTSAFIAETVRAGINSVGDGQMEGARSNGMTY 126 Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS-LAVAVGFADLVSVGGTIINQTGQAIEI 366 +A R V+LPQA++ +IPPL +Q++NL+KNSS LA GF DL+ I + + I Sbjct: 127 TQAMRYVILPQALKIVIPPLGNQFINLIKNSSVLAFVAGF-DLMYQADVIAFSSFETINT 185 Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIA 393 ++ YL L++ ++ +M L K+A Sbjct: 186 YVVVGLFYLVLTLPLSYYMRHLEKKLA 212 >gi|253990627|ref|YP_003041983.1| glutamate/aspartate transport system permease protein gltj [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253782077|emb|CAQ85241.1| glutamate/aspartate transport system permease protein gltj [Photorhabdus asymbiotica] Length = 246 Score = 95.9 bits (237), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 49/129 (37%), Positives = 81/129 (62%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+S + L +TAA + E VR+ + ++PRGQ A +A+GLT + R VLLP A R IIP Sbjct: 111 FISSTVCLGLFTAARMCEQVRAAIQSLPRGQKAAGLAMGLTLPQTYRYVLLPNAYRIIIP 170 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 P+TS+ +NL+KNS++A +G D+ + G +++ + A E Y++++++I L M Sbjct: 171 PMTSEMMNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAYETFTAITLAYITINLVIMLAM 230 Query: 386 NRLNAKIAL 394 + L K+ L Sbjct: 231 HLLEKKVRL 239 Score = 45.8 bits (107), Expect = 0.013, Method: Compositional matrix adjust. Identities = 28/77 (36%), Positives = 42/77 (54%) Query: 81 SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140 +++Y ++ GF T L+ I A I G+L G R NK+++ I YVE+FRN+P Sbjct: 17 GNTTYLGWLIAGFQVTIALSICAWIIAFIAGSLFGILRTVPNKILSGIGTCYVELFRNVP 76 Query: 141 PLVVIFFLYKSVLSVLP 157 +V F Y V +LP Sbjct: 77 LIVQFFIWYLVVPELLP 93 >gi|51244842|ref|YP_064726.1| glutamine ABC transporter, permease protein [Desulfotalea psychrophila LSv54] gi|50875879|emb|CAG35719.1| related to glutamine ABC transporter, permease protein [Desulfotalea psychrophila LSv54] Length = 336 Score = 95.9 bits (237), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 66/177 (37%), Positives = 104/177 (58%), Gaps = 8/177 (4%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQL--HFDKPVLGQFNFIGGSTVSPEFMSLYIALS 274 K ++YI LI G P +V I L Y + + L Q IGG V P + + IAL+ Sbjct: 163 KWFSIIYIE--LIRGTPLMVQIFLWYFVVGNLINAFLTQIG-IGG--VPPLWFGV-IALA 216 Query: 275 CYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNL 334 +T A+ AEIVR+G+ +V RGQMEAA +LGLT+ ++ R V+LPQA+R I+PPL Q+++L Sbjct: 217 TFTGAYTAEIVRAGIQSVHRGQMEAARSLGLTYAESMRKVILPQALRRIMPPLAGQFISL 276 Query: 335 LKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 +K+SSL + ++ I++ + E+ + +YL L+ ++L + L K Sbjct: 277 IKDSSLLGVIAIREVTKATREIVSSSLMPYEMWITCALLYLVLTFALSLCVQHLERK 333 >gi|107022691|ref|YP_621018.1| amino acid ABC transporter permease [Burkholderia cenocepacia AU 1054] gi|116689640|ref|YP_835263.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia cenocepacia HI2424] gi|105892880|gb|ABF76045.1| amino acid ABC transporter membrane protein 1, PAAT family [Burkholderia cenocepacia AU 1054] gi|116647729|gb|ABK08370.1| amino acid ABC transporter membrane protein 1, PAAT family [Burkholderia cenocepacia HI2424] Length = 240 Score = 95.9 bits (237), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 49/98 (50%), Positives = 68/98 (69%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 EF++ ++ LS YTAAF+AE +GL V R Q +AA ALGLT ++ R V+LPQA+R + Sbjct: 106 EFVAGWVGLSAYTAAFVAEECEAGLRGVRRAQHDAAAALGLTPMQSLRYVVLPQAVRIAL 165 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362 PPL QY+NL+KNSSLA+A+G A+L + +T Q Sbjct: 166 PPLFGQYMNLVKNSSLAMAIGVAELSYASRQVETETFQ 203 >gi|227890383|ref|ZP_04008188.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus johnsonii ATCC 33200] gi|227849197|gb|EEJ59283.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus johnsonii ATCC 33200] Length = 212 Score = 95.9 bits (237), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 72/207 (34%), Positives = 111/207 (53%), Gaps = 28/207 (13%) Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY----QLHFD 247 FS +LG+ +L K G+A+ +YI F +P LV+ + Y Q+ F Sbjct: 29 FSLILGVGFALLVVA-----PNKFGRAVAHVYIEIFR--NIPLLVITMIFYLIVPQIWFK 81 Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307 F G+ I L+ YT+AFIAE VR+G+ +V GQME A + G+T+ Sbjct: 82 VS-----GFAAGT----------IGLTLYTSAFIAETVRAGINSVGDGQMEGARSNGMTY 126 Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS-LAVAVGFADLVSVGGTIINQTGQAIEI 366 +A R V+LPQA++ +IPPL +Q++NL+KNSS LA GF DL+ I + + I Sbjct: 127 TQAMRYVILPQALKIVIPPLGNQFINLIKNSSVLAFVAGF-DLMYQADVIAFSSFETINT 185 Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIA 393 ++ YL L++ ++ +M L K+A Sbjct: 186 YVVVGLFYLVLTLPLSYYMRHLEKKLA 212 >gi|83719898|ref|YP_442970.1| binding-protein-dependent transport system inner membrane component [Burkholderia thailandensis E264] gi|167620110|ref|ZP_02388741.1| binding-protein-dependent transport system inner membrane component [Burkholderia thailandensis Bt4] gi|83653723|gb|ABC37786.1| binding-protein-dependent transport system inner membrane component [Burkholderia thailandensis E264] Length = 241 Score = 95.9 bits (237), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 59/149 (39%), Positives = 87/149 (58%), Gaps = 18/149 (12%) Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFN-----FIGGSTV---SPEFMSLYI 271 PL+ F FG+ +L+ +PV+ N +GG + S EF++ ++ Sbjct: 64 PLVVQLLFWYFGVASLL----------PEPVMAWLNTRRAAVVGGVELHWPSFEFVAGWV 113 Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 LS YT+AF+AE ++GL VP GQ AA ALGL+ R+ R V+LPQA+R +PPL QY Sbjct: 114 GLSGYTSAFVAEEFQAGLRGVPAGQYRAAGALGLSPRQTFRFVVLPQAVRIALPPLFGQY 173 Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQT 360 +NL+KNSSL +A+G A+L + +T Sbjct: 174 MNLIKNSSLTMAIGVAELSYASRQVETET 202 >gi|242309543|ref|ZP_04808698.1| ABC transporter [Helicobacter pullorum MIT 98-5489] gi|239524114|gb|EEQ63980.1| ABC transporter [Helicobacter pullorum MIT 98-5489] Length = 237 Score = 95.9 bits (237), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 71/226 (31%), Positives = 124/226 (54%), Gaps = 22/226 (9%) Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKAL----PL---LYIST 226 GL F ++ T A + VLG+V++L +L+ + + +AL PL Y Sbjct: 23 EGLIF---SISTTALAAIIGIVLGVVVALM--QLTNFYPFRNIQALANFNPLSKIAYAYV 77 Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286 ++I G P +V QL + FIG P + IA ++A++AEI+R Sbjct: 78 YIIRGTPAVV------QLM----IWANIIFIGALRDMPILLIAAIAFGINSSAYVAEIIR 127 Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346 +G+ ++ +GQMEAA ALG+ + + + +++PQA++ I+PPL S+++ LLK +S+ +G Sbjct: 128 AGIQSLDKGQMEAARALGMGYAMSMKEIIIPQAIKRILPPLVSEFIALLKETSIVGFIGG 187 Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 DL+ I +QT +AIE +L IYL L+ + A+ M ++ ++ Sbjct: 188 VDLLRSASIITSQTYRAIEPLLAVGIIYLILTSLFAMLMRKVEKRL 233 >gi|170732942|ref|YP_001764889.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia cenocepacia MC0-3] gi|169816184|gb|ACA90767.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia cenocepacia MC0-3] Length = 240 Score = 95.9 bits (237), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 49/98 (50%), Positives = 68/98 (69%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 EF++ ++ LS YTAAF+AE +GL V R Q +AA ALGLT ++ R V+LPQA+R + Sbjct: 106 EFVAGWVGLSAYTAAFVAEECEAGLRGVRRAQHDAAAALGLTPMQSLRYVVLPQAVRIAL 165 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362 PPL QY+NL+KNSSLA+A+G A+L + +T Q Sbjct: 166 PPLFGQYMNLVKNSSLAMAIGVAELSYASRQVETETFQ 203 >gi|319939264|ref|ZP_08013627.1| amino acid ABC transporter [Streptococcus anginosus 1_2_62CV] gi|319811660|gb|EFW07936.1| amino acid ABC transporter [Streptococcus anginosus 1_2_62CV] Length = 727 Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 60/209 (28%), Positives = 109/209 (52%), Gaps = 23/209 (11%) Query: 190 FVFSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243 F + V+GI+ +F+ R+ + +PL+ ++ F+ +G+P L+ +Q Sbjct: 535 FAIAMVIGIIFGMFSVSPVKTLRVISEIFVDVIRGIPLMILAAFIFWGIPNLIESMTGHQ 594 Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 + +F+ G+ IALS A+IAEIVR G+ AVP GQMEA+ +L Sbjct: 595 SPIN-------DFVAGT----------IALSLNAGAYIAEIVRGGIQAVPVGQMEASRSL 637 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363 G+++ K R ++LPQA + ++P +Q++ LK++++ A+G +L G II + Q+ Sbjct: 638 GISYSKTMRKIILPQATKIMLPNFVNQFVIALKDTTIVSAIGLVELFQTGKIIIARNYQS 697 Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392 ++ I YL + ++ RL +I Sbjct: 698 FKMYAILAVFYLIIITLLTRLAKRLEKRI 726 >gi|268319111|ref|YP_003292767.1| ABC-type amino acid transport system, permease component [Lactobacillus johnsonii FI9785] gi|262397486|emb|CAX66500.1| ABC-type amino acid transport system, permease component [Lactobacillus johnsonii FI9785] Length = 212 Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 72/207 (34%), Positives = 111/207 (53%), Gaps = 28/207 (13%) Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY----QLHFD 247 FS +LG+ +L K G+A+ +YI F +P LV+ + Y Q+ F Sbjct: 29 FSLILGVGFALLEVA-----PNKFGRAVAHVYIEIFR--NIPLLVITMIFYLIVPQIWFK 81 Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307 F G+ I L+ YT+AFIAE VR+G+ +V GQME A + G+T+ Sbjct: 82 VS-----GFAAGT----------IGLTLYTSAFIAETVRAGINSVGDGQMEGARSNGMTY 126 Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS-LAVAVGFADLVSVGGTIINQTGQAIEI 366 +A R V+LPQA++ +IPPL +Q++NL+KNSS LA GF DL+ I + + I Sbjct: 127 TQAMRYVILPQALKIVIPPLGNQFINLIKNSSVLAFVAGF-DLMYQADVIAFSSFETINT 185 Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIA 393 ++ YL L++ ++ +M L K+A Sbjct: 186 YVVVGLFYLVLTLPLSYYMRHLEKKLA 212 >gi|148993850|ref|ZP_01823252.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae SP9-BS68] gi|168489068|ref|ZP_02713267.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae SP195] gi|147927675|gb|EDK78700.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae SP9-BS68] gi|183572432|gb|EDT92960.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae SP195] gi|332073579|gb|EGI84058.1| amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Streptococcus pneumoniae GA17570] Length = 721 Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 61/209 (29%), Positives = 112/209 (53%), Gaps = 23/209 (11%) Query: 190 FVFSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243 F + V+GI+ +F+ R+ + +PL+ ++ F+ +G+P Sbjct: 529 FAIAIVIGIIFGMFSVSPYKSLRVISEIFVDVIRGIPLMILAAFIFWGIP---------- 578 Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 +F + + GQ + I +F++ IALS AA+IAEIVR G+ AVP GQMEA+ +L Sbjct: 579 -NFIESITGQQSPIN------DFVAGTIALSLNAAAYIAEIVRGGIQAVPVGQMEASRSL 631 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363 G+++ K R ++LPQ+ + ++P +Q++ LK++++ A+G +L G II + Q+ Sbjct: 632 GISYGKTMRKIILPQSTKLMLPNFVNQFVIALKDTTIVSAIGLVELFQTGKIIIARNYQS 691 Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392 ++ I YL + ++ RL +I Sbjct: 692 FKMYAILAIFYLVIITLLTRLAKRLEKRI 720 >gi|332074851|gb|EGI85323.1| amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Streptococcus pneumoniae GA41301] Length = 721 Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 62/209 (29%), Positives = 111/209 (53%), Gaps = 23/209 (11%) Query: 190 FVFSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243 F + V+GI+ F+ R+ + +PL+ ++ F+ +G+P Sbjct: 529 FAIAIVIGIIFGTFSVSPYKSLRVISEIFVDVIRGIPLMILAAFIFWGIP---------- 578 Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 +F + + GQ + I +F++ IALS AA+IAEIVR G+ AVP GQMEA+ +L Sbjct: 579 -NFIESITGQQSPIN------DFVAGTIALSLNAAAYIAEIVRGGIQAVPVGQMEASRSL 631 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363 G+++ K R ++LPQA + ++P +Q++ LK++++ A+G +L G II + Q+ Sbjct: 632 GISYGKTMRKIILPQATKLMLPNFVNQFVIALKDTTIVSAIGLVELFQTGKIIIARNYQS 691 Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392 ++ I YL + ++ RL +I Sbjct: 692 FKMYAILAIFYLVIITLLTRLAKRLEKRI 720 >gi|268590403|ref|ZP_06124624.1| glutamate/aspartate ABC transporter, permease protein [Providencia rettgeri DSM 1131] gi|291314317|gb|EFE54770.1| glutamate/aspartate ABC transporter, permease protein [Providencia rettgeri DSM 1131] Length = 246 Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 49/129 (37%), Positives = 80/129 (62%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+S + L +TAA + E VR+ + ++PRGQ AA+A+GLT + R VLLP A R I+P Sbjct: 111 FISSMLCLGLFTAARMTEQVRAAIQSLPRGQKSAALAMGLTLPQTYRYVLLPNAYRVILP 170 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 P+TS+ LNL+KNS++A +G D+ + G +++ + A E Y+ ++++I + M Sbjct: 171 PMTSEMLNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAWESFTAITLAYVGINVIIMILM 230 Query: 386 NRLNAKIAL 394 L K+ L Sbjct: 231 TLLERKVRL 239 Score = 39.7 bits (91), Expect = 0.74, Method: Compositional matrix adjust. Identities = 42/153 (27%), Positives = 68/153 (44%), Gaps = 20/153 (13%) Query: 81 SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140 +++Y ++ G T L+ I A ++G+ G R N+ +A++ YVE+FRN+P Sbjct: 17 GNTTYLGWLISGLEVTVTLSICAWIIAFLVGSFFGILRTVPNRFLAFLGTAYVELFRNVP 76 Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200 +V F Y + +LP SI F M +D N + F+ S + L Sbjct: 77 LIVQFFTWYLVIPELLP---RSIGDWFKM------------DLDPNYQFFISSM---LCL 118 Query: 201 SLF-ATRLSRHFHEKTGKALPLLYISTFLIFGL 232 LF A R++ ++LP S L GL Sbjct: 119 GLFTAARMTEQVRAAI-QSLPRGQKSAALAMGL 150 >gi|283784425|ref|YP_003364290.1| glutamate/aspartate ABC transporter, permease protein [Citrobacter rodentium ICC168] gi|282947879|emb|CBG87441.1| glutamate/aspartate ABC transporter, permease protein [Citrobacter rodentium ICC168] Length = 246 Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 50/129 (38%), Positives = 80/129 (62%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+S I L +TAA + E VR+ + ++PRGQ AA+A+GLT +A R VLLP A R I+P Sbjct: 111 FLSSMICLGLFTAARVCEQVRAAIQSLPRGQKNAALAMGLTLPQAYRYVLLPNAYRVIVP 170 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 P+TS+ +NL+KNS++A +G D+ + G +++ + A E Y+ ++ +I L M Sbjct: 171 PMTSEMMNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAWESFTAITLAYVLINAVIMLVM 230 Query: 386 NRLNAKIAL 394 + K+ L Sbjct: 231 TLVERKVRL 239 Score = 42.4 bits (98), Expect = 0.14, Method: Compositional matrix adjust. Identities = 26/77 (33%), Positives = 43/77 (55%) Query: 81 SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140 +++Y + GF T L+ + I A ++G+L G R N+ ++ I +YVE+FRN+P Sbjct: 17 GNTTYLGWLWNGFQVTVALSITAWIIAFLVGSLFGILRTVPNRFLSGIGTLYVELFRNVP 76 Query: 141 PLVVIFFLYKSVLSVLP 157 +V F Y V +LP Sbjct: 77 LIVQFFTWYLVVPELLP 93 >gi|329296084|ref|ZP_08253420.1| glutamate/aspartate transport system permease protein gltJ [Plautia stali symbiont] Length = 246 Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 50/129 (38%), Positives = 79/129 (61%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+S I L +TAA + E VR+ + ++PRGQ A +A+GLT + R VL P A R I+P Sbjct: 111 FLSSTICLGLFTAAHVCEQVRAAIQSLPRGQKNAGLAMGLTLPQTYRYVLPPNAYRVIVP 170 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 P+TS+ LNL+KNS++A +G DL + G +++ + A E Y+ ++++I L M Sbjct: 171 PMTSEMLNLVKNSAIASTIGLVDLAAQAGKLLDYSAHAYESFTAITLAYVGINLVIMLIM 230 Query: 386 NRLNAKIAL 394 + + KI L Sbjct: 231 SLVERKIRL 239 Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust. Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 5/85 (5%) Query: 69 GFEIDQGI----VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKL 124 G + + GI P+ +++Y + GF T ++ I A ++G+ G R N+ Sbjct: 2 GIDWNWGIFLQQAPF-GNTTYLGWLWSGFQVTVAVSCCAWIIAFLVGSFFGILRTVPNRW 60 Query: 125 VAWICRVYVEVFRNIPPLVVIFFLY 149 ++ I YVE+FRNIP +V FF Y Sbjct: 61 LSTIGTCYVELFRNIPLIVQFFFWY 85 >gi|242241398|ref|YP_002989579.1| polar amino acid ABC transporter inner membrane subunit [Dickeya dadantii Ech703] gi|242133455|gb|ACS87757.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya dadantii Ech703] Length = 246 Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 60/141 (42%), Positives = 85/141 (60%), Gaps = 4/141 (2%) Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279 PLL F FG L+ L L+ +L F+F+ S S EF++ L+ Y+AA Sbjct: 73 PLLVQLFFWYFGAGQLLPECLMQWLNTPHTLL--FSFL--SWPSFEFLAGLFGLTLYSAA 128 Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339 FI+E VR+G+ V GQ AA ALGLTH +A R V+LPQA++ +PPL QY+N++KNSS Sbjct: 129 FISEEVRAGIAGVAGGQKYAACALGLTHWQAMRYVVLPQALKIALPPLLGQYMNIIKNSS 188 Query: 340 LAVAVGFADLVSVGGTIINQT 360 L +A+G A+L + +T Sbjct: 189 LTMAIGVAELSYASRQVETET 209 >gi|225868288|ref|YP_002744236.1| glutamine ABC transporter, glutamine-binding protein/permease protein [Streptococcus equi subsp. zooepidemicus] gi|225701564|emb|CAW98789.1| putative glutamine ABC transporter, glutamine-binding protein/permease protein [Streptococcus equi subsp. zooepidemicus] Length = 721 Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 62/211 (29%), Positives = 108/211 (51%), Gaps = 27/211 (12%) Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPTLVLIALKYQ 243 F + V+GIV + A S + + +PL+ ++ F+ +G+P L+ +Q Sbjct: 529 FAIALVIGIVFGMMAVSPSSSLRTVSTIFVDVVRGIPLMIVAAFIFWGVPNLIESMTGHQ 588 Query: 244 LHFDKPVLGQFNFIGGSTVSP--EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301 SP +F++ IALS A+IAEIVR G+ AVP GQMEA+ Sbjct: 589 -------------------SPINDFVAATIALSLNGGAYIAEIVRGGIEAVPAGQMEASR 629 Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361 +LGL++ R ++LPQA++ ++P +Q++ LK++++ A+G +L G II + Sbjct: 630 SLGLSYHTTMRRIILPQAIKLMLPNFINQFVISLKDTTIVSAIGLVELFQTGKIIIARNY 689 Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 Q+ + I IYL + ++ RL ++ Sbjct: 690 QSFRMYAILAVIYLIMITLLTRLAKRLEKRL 720 >gi|290476188|ref|YP_003469088.1| glutamate/aspartate ABC transporter membrane protein [Xenorhabdus bovienii SS-2004] gi|289175521|emb|CBJ82324.1| glutamate/aspartate transport protein (ABC superfamily, membrane) [Xenorhabdus bovienii SS-2004] Length = 246 Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 52/129 (40%), Positives = 78/129 (60%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+S I L +TAA I E VR+ + ++PRGQ A A+GLT + R VLLP A R IIP Sbjct: 111 FISSVICLGLFTAARICEQVRAAIQSLPRGQKAAGQAMGLTLPQTYRYVLLPNAYRVIIP 170 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 P+TS+ LNL+KNS++A +G D+ + G +++ + A E Y+ ++++I L M Sbjct: 171 PMTSEMLNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAYESFTAITLAYVGINLVIMLAM 230 Query: 386 NRLNAKIAL 394 L K+ L Sbjct: 231 TLLEKKVRL 239 Score = 42.7 bits (99), Expect = 0.094, Method: Compositional matrix adjust. Identities = 27/77 (35%), Positives = 40/77 (51%) Query: 81 SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140 +++Y ++ GF T L+ + A +G+L G R NK +A + YVE+FRNIP Sbjct: 17 GNTTYLGWLISGFQVTVALSVCAWVIALAVGSLFGILRTVPNKFLATLGACYVELFRNIP 76 Query: 141 PLVVIFFLYKSVLSVLP 157 +V F Y V LP Sbjct: 77 LIVQFFIWYLVVPEFLP 93 >gi|157150220|ref|YP_001450326.1| glutamine ABC transporter permease and substrate binding protein [Streptococcus gordonii str. Challis substr. CH1] gi|157075014|gb|ABV09697.1| glutamine ABC transporter permease and substrate binding protein [Streptococcus gordonii str. Challis substr. CH1] Length = 485 Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 60/209 (28%), Positives = 107/209 (51%), Gaps = 23/209 (11%) Query: 190 FVFSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243 F + V+GI+ +F+ R + +PL+ ++ F+ +G+P L+ Q Sbjct: 293 FAIALVIGIIFGMFSVSPYKPLRWIAEIFVDVIRGVPLMILAAFIFWGIPNLIESITNQQ 352 Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 + +F+ G+ IALS + A+IAEIVR G+ AVP GQMEA+ +L Sbjct: 353 TPIN-------DFVAGT----------IALSLNSGAYIAEIVRGGIQAVPAGQMEASRSL 395 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363 G+++ K R ++LPQA + ++P +Q++ LK++++ A+G +L G II + Q+ Sbjct: 396 GISYSKTMRKIILPQATKIMLPNFVNQFVITLKDTTIVSAIGLVELFQTGKNIIARNYQS 455 Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392 + I +YL + + RL +I Sbjct: 456 FRMYAILAVLYLLIITFLTRLAKRLEKRI 484 >gi|50120251|ref|YP_049418.1| glutamate/aspartate transport system permease [Pectobacterium atrosepticum SCRI1043] gi|49610777|emb|CAG74222.1| glutamate/aspartate transport system permease protein [Pectobacterium atrosepticum SCRI1043] Length = 224 Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 48/127 (37%), Positives = 80/127 (62%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 +S +A S + AA+ +EI+R+G+I+V RGQ AA+ALG+TH ++ +LV+LPQA R+++ Sbjct: 96 RLISAMVAFSLFEAAYYSEIIRAGIISVSRGQSSAALALGMTHWQSMKLVILPQAFRAMV 155 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 P L +Q + L +++SL + AD TI + G +E+IL FIY SI ++ Sbjct: 156 PLLLTQGIVLFQDTSLVYVLSLADFFRTASTIGERDGTQVEMILFAGFIYFLFSITASML 215 Query: 385 MNRLNAK 391 ++ L + Sbjct: 216 VSYLKKR 222 Score = 41.2 bits (95), Expect = 0.26, Method: Compositional matrix adjust. Identities = 21/65 (32%), Positives = 39/65 (60%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151 G V T + + ++ I GT++ RLS K ++W ++YV +FR++P ++V+ + Y Sbjct: 19 GMVVTLKITLTAVVFGIIWGTILAVMRLSPIKAISWFAKLYVNLFRSVPLVMVLLWFYLV 78 Query: 152 VLSVL 156 V S+L Sbjct: 79 VPSLL 83 >gi|238019429|ref|ZP_04599855.1| hypothetical protein VEIDISOL_01298 [Veillonella dispar ATCC 17748] gi|237864128|gb|EEP65418.1| hypothetical protein VEIDISOL_01298 [Veillonella dispar ATCC 17748] Length = 218 Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 60/168 (35%), Positives = 98/168 (58%), Gaps = 10/168 (5%) Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287 +I G P LV I L Y F P+ I G + P F++ A S + A+++EI R+ Sbjct: 61 IIRGTPLLVQIFLIY---FALPM------ITGQRIDP-FIAAVTACSINSGAYVSEIFRA 110 Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347 G+ ++ +GQMEA +LGLT + R +++PQA ++IIPPL ++++ +LK+SSL +GF Sbjct: 111 GIQSIDKGQMEAGRSLGLTWGQTMRYIIMPQAFKAIIPPLGNEFIAMLKDSSLVSVIGFE 170 Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395 +L G II +T + EI IYL +++ I+ + L K ++K Sbjct: 171 ELTRRGQLIIAKTYASFEIWGTVAVIYLIMTVTISQLVGYLERKYSIK 218 >gi|257139194|ref|ZP_05587456.1| binding-protein-dependent transport system inner membrane component [Burkholderia thailandensis E264] Length = 274 Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 59/149 (39%), Positives = 87/149 (58%), Gaps = 18/149 (12%) Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFN-----FIGGSTV---SPEFMSLYI 271 PL+ F FG+ +L+ +PV+ N +GG + S EF++ ++ Sbjct: 97 PLVVQLLFWYFGVASLL----------PEPVMAWLNTRRAAVVGGVELHWPSFEFVAGWV 146 Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 LS YT+AF+AE ++GL VP GQ AA ALGL+ R+ R V+LPQA+R +PPL QY Sbjct: 147 GLSGYTSAFVAEEFQAGLRGVPAGQYRAAGALGLSPRQTFRFVVLPQAVRIALPPLFGQY 206 Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQT 360 +NL+KNSSL +A+G A+L + +T Sbjct: 207 MNLIKNSSLTMAIGVAELSYASRQVETET 235 >gi|313680185|ref|YP_004057924.1| amino acid ABC transporter membrane protein, paat family [Oceanithermus profundus DSM 14977] gi|313152900|gb|ADR36751.1| amino acid ABC transporter membrane protein, PAAT family [Oceanithermus profundus DSM 14977] Length = 275 Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 70/225 (31%), Positives = 117/225 (52%), Gaps = 18/225 (8%) Query: 181 LTMDTNAKIFVFSFVLGIVLSLFA--TRLSR--------HFHEKTGKALPLLYISTFLIF 230 L + K+ V S V G+ L LFA RLS+ F+ + PLL F Sbjct: 55 LGAEVTIKLTVISSVTGLFLGLFAGIARLSKNPLFRWPAQFYVWVIRGTPLLVQILFAYN 114 Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290 LP L+ A KY P + V + + +IALS A+ AE++R+G+ Sbjct: 115 ALPFLLEPAWKYLQPLGAPPI--------QDVLTPYWAAFIALSVNVGAYNAEVIRAGIQ 166 Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 A+ +GQ EAA++LG+ + R +++PQA++ ++PPL + + LLK+SSLA + +LV Sbjct: 167 AIAKGQWEAAMSLGMRPFQVMRYIIVPQAIKIVVPPLVNNVIALLKDSSLASVITLLELV 226 Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395 G +I+ T + +E+ + IYL L+ ++ F + L ++A + Sbjct: 227 HQGQRMISITFRPVEVYVAVAAIYLILTTVLTFFTDWLEREMARR 271 >gi|304386275|ref|ZP_07368608.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Pediococcus acidilactici DSM 20284] gi|304327632|gb|EFL94859.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Pediococcus acidilactici DSM 20284] Length = 216 Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 70/207 (33%), Positives = 112/207 (54%), Gaps = 32/207 (15%) Query: 192 FSFVLG---IVLSLFATRLSR---HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH 245 FS V+G ++ + +RL+R + + + +PLL ++ F +P V Sbjct: 29 FSLVIGSLFAIMEVLPSRLARTIGRIYVEVVRNIPLLVVTMFFYIVIPRYV--------- 79 Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305 P + F G+ I L+ YT+AFIAE VR+G+ +V GQMEAA + G+ Sbjct: 80 ---PAVN--GFTAGT----------IGLTIYTSAFIAETVRAGIQSVSGGQMEAARSNGM 124 Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS-LAVAVGFADLVSVGGTIINQTGQAI 364 T +A R ++LPQA + +IPPL +Q++NL+KNSS LA GF DL+ VG I + T I Sbjct: 125 TFSQAMRYIVLPQAFKIVIPPLGNQFINLVKNSSVLAFVAGF-DLMYVGNDIASTTFDTI 183 Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAK 391 L+ +YL +++ ++ +M L + Sbjct: 184 NSYLVVGVLYLIITMPLSYYMRYLEKR 210 Score = 37.4 bits (85), Expect = 4.4, Method: Compositional matrix adjust. Identities = 21/67 (31%), Positives = 35/67 (52%) Query: 83 SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142 ++++ + G T + + + +IG+L + ++L I R+YVEV RNIP L Sbjct: 6 TNHSAELFSGLGQTLLCSLIALFFSLVIGSLFAIMEVLPSRLARTIGRIYVEVVRNIPLL 65 Query: 143 VVIFFLY 149 VV F Y Sbjct: 66 VVTMFFY 72 >gi|312792975|ref|YP_004025898.1| polar amino acid ABC transporter inner membrane subunit [Caldicellulosiruptor kristjanssonii 177R1B] gi|312180115|gb|ADQ40285.1| polar amino acid ABC transporter, inner membrane subunit [Caldicellulosiruptor kristjanssonii 177R1B] Length = 220 Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 66/226 (29%), Positives = 116/226 (51%), Gaps = 32/226 (14%) Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSR--------HFHEKTGKALPLLYISTFLIFGL 232 +T++ A V G+V +LF R+S+ F+ + PLL F+ +GL Sbjct: 19 VTIELTAIAVTIGLVFGLVAALF--RISKIKVLNYIGSFYVWLFRGTPLLLQIFFIYYGL 76 Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292 P +V P L P F++ IAL + A+ AEI+R+ ++++ Sbjct: 77 PKIV------------PAL----------TLPAFLAGAIALIINSGAYTAEIIRAAILSI 114 Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352 RGQ EAA ALG+T+ + R V++PQ + +IPP+ ++++ LLK+SSL +G +L+ Sbjct: 115 DRGQYEAAKALGMTYLQTMRYVIVPQTYKRLIPPIGNEFIALLKDSSLVSTIGMVELMRA 174 Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 + TG+ EI + + IYL+L+ + + N L ++ E++ Sbjct: 175 AQLKASATGRDAEIYIAALVIYLALTTVFSTIFNWLEKRLGKYEQQ 220 >gi|116334343|ref|YP_795870.1| ABC-type amino acid transport system, permease component [Lactobacillus brevis ATCC 367] gi|116099690|gb|ABJ64839.1| ABC-type amino acid transport system, permease component [Lactobacillus brevis ATCC 367] Length = 212 Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 70/203 (34%), Positives = 109/203 (53%), Gaps = 18/203 (8%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 +FS ++G +L S K G+ + +YI F +P LV I + + + F V Sbjct: 28 IFSLIIGTFFALLEESPS-----KFGRGVARVYIEIFR--NIPLLV-ITMFFYVVFPLYV 79 Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 + F G+ I L+ YT+AFIAE VR+G+ +V GQME A A GL+ +A Sbjct: 80 IKMNGFTAGT----------IGLTLYTSAFIAETVRAGIQSVDPGQMEGARANGLSFWQA 129 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370 R ++LPQA R +IPPL +Q++NL+KNSS VG DL+ G I + + + I Sbjct: 130 MRYIVLPQAFRYVIPPLGNQFVNLVKNSSTLAFVGGFDLMYQGNVIASSSLETIAAYSAV 189 Query: 371 MFIYLSLSIMIALFMNRLNAKIA 393 +YL +++ I+ +M L ++A Sbjct: 190 GVLYLVITMPISYYMRYLEKRLA 212 Score = 43.5 bits (101), Expect = 0.058, Method: Compositional matrix adjust. Identities = 24/67 (35%), Positives = 34/67 (50%) Query: 83 SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142 +Y +L G T + +I + IIGT S +K + RVY+E+FRNIP L Sbjct: 6 QTYGGTLLYGLGQTLLCSLLALIFSLIIGTFFALLEESPSKFGRGVARVYIEIFRNIPLL 65 Query: 143 VVIFFLY 149 V+ F Y Sbjct: 66 VITMFFY 72 >gi|254384681|ref|ZP_05000020.1| permease [Streptomyces sp. Mg1] gi|194343565|gb|EDX24531.1| permease [Streptomyces sp. Mg1] Length = 316 Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 74/194 (38%), Positives = 105/194 (54%), Gaps = 9/194 (4%) Query: 189 IFVFSFVLGIVLSL-FAT-RLSRHFHEKTGKALPLLYISTFLIFGLPTLV--LIALKYQL 244 I V S LG++L + FA RLS++ TG A+ LYI + G P V L+ L Sbjct: 84 ISVSSMALGLLLGIVFAVMRLSKN--PVTG-AVSWLYI--WFFRGTPVYVQLLVWFNLSL 138 Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304 F LG V FM + L A++AEIVR+G+ +V GQ EAA ALG Sbjct: 139 IFQYINLGPIYKNETVDVMTPFMVALLGLGLNEGAYMAEIVRAGIQSVDEGQTEAAHALG 198 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364 + K R ++LPQAMR IIPP ++++N+LK SSL AV + +L+ I N G + Sbjct: 199 MPQTKTMRRIVLPQAMRVIIPPTGNEFINMLKTSSLVSAVQYTELLRASSNIGNTAGAIM 258 Query: 365 EIILIWMFIYLSLS 378 E++ + F YL+L+ Sbjct: 259 EMLFVASFWYLALT 272 >gi|313893707|ref|ZP_07827274.1| glutamine ABC transporter, permease protein GlnP [Veillonella sp. oral taxon 158 str. F0412] gi|313441721|gb|EFR60146.1| glutamine ABC transporter, permease protein GlnP [Veillonella sp. oral taxon 158 str. F0412] Length = 218 Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 60/168 (35%), Positives = 98/168 (58%), Gaps = 10/168 (5%) Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287 +I G P LV I L Y F P+ I G + P F++ A S + A+++EI R+ Sbjct: 61 IIRGTPLLVQIFLIY---FALPM------ITGQRIDP-FIAAVTACSINSGAYVSEIFRA 110 Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347 G+ ++ +GQMEA +LGLT + R +++PQA ++IIPPL ++++ +LK+SSL +GF Sbjct: 111 GIQSIDKGQMEAGRSLGLTWGQTMRYIIMPQAFKAIIPPLGNEFIAMLKDSSLVSVIGFE 170 Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395 +L G II +T + EI IYL +++ I+ + L K ++K Sbjct: 171 ELTRRGQLIIAKTYASFEIWGTVAVIYLIMTVTISQLVGYLERKYSIK 218 >gi|225573416|ref|ZP_03782171.1| hypothetical protein RUMHYD_01608 [Blautia hydrogenotrophica DSM 10507] gi|225039226|gb|EEG49472.1| hypothetical protein RUMHYD_01608 [Blautia hydrogenotrophica DSM 10507] Length = 213 Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 50/131 (38%), Positives = 79/131 (60%) Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322 S FM+ ++AL+ Y A+++E+VR GL A+PRGQMEA +LGL + + LPQ M+ Sbjct: 71 SSAFMTAFVALTLYHGAYVSEVVRGGLTAIPRGQMEAGKSLGLGFVRIMFSIYLPQIMKQ 130 Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382 IIP L QY+ ++K+++L VG DL+ ++ T + +EI LI IY + +I Sbjct: 131 IIPTLCGQYILVVKDTTLVSVVGLQDLMWNAKELMAVTYKPMEIYLIVGLIYFVICWVID 190 Query: 383 LFMNRLNAKIA 393 + NR+ K+ Sbjct: 191 IIANRVENKVT 201 Score = 38.5 bits (88), Expect = 2.1, Method: Compositional matrix adjust. Identities = 23/57 (40%), Positives = 31/57 (54%) Query: 96 TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSV 152 TF L ++ I+G LVG R +V+ I +YV R IPPLVV+ LY +V Sbjct: 12 TFKLVPCVVVSTLIVGILVGVVRFRKIPVVSQIIDLYVTAMRGIPPLVVLMMLYFTV 68 >gi|206560033|ref|YP_002230797.1| putative amino acid transport system, membrane protein [Burkholderia cenocepacia J2315] gi|198036074|emb|CAR51968.1| putative amino acid transport system, membrane protein [Burkholderia cenocepacia J2315] Length = 247 Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 49/98 (50%), Positives = 68/98 (69%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 EF++ ++ LS YTAAF+AE +GL V R Q +AA ALGLT ++ R V+LPQA+R + Sbjct: 113 EFVAGWVGLSAYTAAFVAEECEAGLRGVRRAQHDAAAALGLTPMQSLRYVVLPQAVRIAL 172 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362 PPL QY+NL+KNSSLA+A+G A+L + +T Q Sbjct: 173 PPLFGQYMNLVKNSSLAMAIGVAELSYASRQVETETFQ 210 >gi|238791650|ref|ZP_04635288.1| Glutamate/aspartate transport system permease protein gltJ [Yersinia intermedia ATCC 29909] gi|238729266|gb|EEQ20782.1| Glutamate/aspartate transport system permease protein gltJ [Yersinia intermedia ATCC 29909] Length = 246 Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 50/129 (38%), Positives = 79/129 (61%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+S + L +TAA + E VR+G+ ++PRGQ A +A+GLT + R VLLP A R IIP Sbjct: 111 FLSSMLCLGLFTAARVCEQVRAGIQSLPRGQKAAGLAMGLTLPQTYRYVLLPNAYRVIIP 170 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 P+TS+ LNL+KNS++A +G D+ + G +++ + A E Y+ ++ +I L M Sbjct: 171 PMTSEMLNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAYESFTAITLGYVLINAVIMLLM 230 Query: 386 NRLNAKIAL 394 + K+ L Sbjct: 231 RLVEKKVQL 239 Score = 43.1 bits (100), Expect = 0.067, Method: Compositional matrix adjust. Identities = 26/78 (33%), Positives = 42/78 (53%) Query: 81 SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140 +++Y I GF T L+ + A +G+L G R N++++ I YVE+FRN+P Sbjct: 17 GNTTYLGWIWSGFQVTVALSLCAWVIAFFVGSLFGILRTVPNRILSGIGTCYVELFRNVP 76 Query: 141 PLVVIFFLYKSVLSVLPI 158 +V F Y V +LP+ Sbjct: 77 LIVQFFTWYLVVPELLPV 94 >gi|323496903|ref|ZP_08101931.1| ABC-type amino acid transport system permease component [Vibrio sinaloensis DSM 21326] gi|323317977|gb|EGA70960.1| ABC-type amino acid transport system permease component [Vibrio sinaloensis DSM 21326] Length = 246 Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 63/210 (30%), Positives = 113/210 (53%), Gaps = 29/210 (13%) Query: 191 VFSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244 +F+ LG+V++L A +L + + +++P+L + ++ +G+PTL+ ++L + Sbjct: 57 LFAMTLGLVIALLALAKSPFLQLLNRIYVEVIRSIPVLVLLLWVYYGMPTLLDVSLNH-- 114 Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304 F + IAL+ +AF+AE+ R G+ A+ RGQ EAA +LG Sbjct: 115 ---------------------FWAGVIALTVAESAFMAEVFRGGIQAISRGQHEAAESLG 153 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364 L + + RLV+LPQA R I+PPL +Q++ +LK SSL +G +DL ++ + Sbjct: 154 LNYWQKMRLVILPQAFRHILPPLGNQFVYILKMSSLVSVIGLSDLTRRANELVVNEYLPL 213 Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIAL 394 EI + YL L ++++ + L +IA+ Sbjct: 214 EIYTFLVVEYLVLILLVSHAVRWLEKRIAI 243 Score = 36.6 bits (83), Expect = 6.4, Method: Compositional matrix adjust. Identities = 20/70 (28%), Positives = 42/70 (60%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L GF +T ++ M+ A +G ++ L+ + + + R+YVEV R+IP LV++ ++ Sbjct: 41 LLAGFNDTIQVSLLSMLFAMTLGLVIALLALAKSPFLQLLNRIYVEVIRSIPVLVLLLWV 100 Query: 149 YKSVLSVLPI 158 Y + ++L + Sbjct: 101 YYGMPTLLDV 110 >gi|156934834|ref|YP_001438750.1| hypothetical protein ESA_02682 [Cronobacter sakazakii ATCC BAA-894] gi|156533088|gb|ABU77914.1| hypothetical protein ESA_02682 [Cronobacter sakazakii ATCC BAA-894] Length = 246 Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 49/129 (37%), Positives = 79/129 (61%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+S I L +TAA + E VR+ + ++PRGQ A +A+GLT + R VLLP A R I+P Sbjct: 111 FLSSMICLGLFTAARVCEQVRAAIQSLPRGQKNAGLAMGLTLPQTYRYVLLPNAYRVIVP 170 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 P+TS+ +NL+KNS++A +G D+ + G +++ + A E Y+ ++ +I L M Sbjct: 171 PMTSEMMNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAWESFTAITLAYVFINAVIMLVM 230 Query: 386 NRLNAKIAL 394 N + K+ L Sbjct: 231 NLVERKVRL 239 Score = 45.1 bits (105), Expect = 0.021, Method: Compositional matrix adjust. Identities = 40/131 (30%), Positives = 60/131 (45%), Gaps = 19/131 (14%) Query: 81 SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140 +++Y + GF T L+ S I A ++G+L G R N+ ++ I YVE+FRN+P Sbjct: 17 GNTTYLGWLWSGFQVTVALSISAWIIAFLVGSLFGILRTVPNRFLSGIGTCYVELFRNVP 76 Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200 +V F Y V +LP N G+ F +D N + F+ S I L Sbjct: 77 LIVQFFTWYLVVPELLP--------------ENLGMWFKA-ELDPNVQFFLSSM---ICL 118 Query: 201 SLF-ATRLSRH 210 LF A R+ Sbjct: 119 GLFTAARVCEQ 129 >gi|288905601|ref|YP_003430823.1| amino acid ABC transporter, amino acid-binding/permease protein [Streptococcus gallolyticus UCN34] gi|288732327|emb|CBI13897.1| putative amino acid ABC transporter, amino acid-binding/permease protein [Streptococcus gallolyticus UCN34] Length = 741 Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 60/209 (28%), Positives = 113/209 (54%), Gaps = 23/209 (11%) Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPTLVLIALKYQ 243 F + V+GI+ + A ++ + + +PL+ ++ F+ +G+P L+ Sbjct: 549 FAIAMVIGIIFGMMAVAPNKVLRTISAVFVDIVRGIPLMIVAAFIFWGIPNLL------- 601 Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 + + G+ + I +F++ IALS A+IAEIVR G+ AVP+GQMEA+ +L Sbjct: 602 ----ESITGKQSPIN------DFVAATIALSLNGGAYIAEIVRGGIEAVPQGQMEASRSL 651 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363 G+++ K + V+LPQA+R ++P +Q++ LK++++ A+G +L G II + Q+ Sbjct: 652 GISYGKTMQKVILPQAVRLMLPNFINQFVISLKDTTIVSAIGLVELFQTGKIIIARNYQS 711 Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392 + I IYL + ++ RL ++ Sbjct: 712 FRMYAILAVIYLVMITLLTRLAKRLEKRL 740 >gi|171318959|ref|ZP_02908089.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria MEX-5] gi|171095844|gb|EDT40788.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria MEX-5] Length = 240 Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 48/96 (50%), Positives = 67/96 (69%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 EF++ ++ LS YTAAF+AE +GL V R Q +AA ALGLT ++ R V+LPQA+R + Sbjct: 106 EFVAGWVGLSAYTAAFVAEECEAGLRGVRRAQHDAAAALGLTPMQSLRYVVLPQAVRIAL 165 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 PPL QY+NL+KNSSLA+A+G A+L + +T Sbjct: 166 PPLFGQYMNLVKNSSLAMAIGVAELSYASRQVETET 201 >gi|227509838|ref|ZP_03939887.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227512775|ref|ZP_03942824.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus buchneri ATCC 11577] gi|227522899|ref|ZP_03952948.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus hilgardii ATCC 8290] gi|227083975|gb|EEI19287.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus buchneri ATCC 11577] gi|227089928|gb|EEI25240.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus hilgardii ATCC 8290] gi|227190762|gb|EEI70829.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 212 Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 53/129 (41%), Positives = 84/129 (65%), Gaps = 2/129 (1%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F S + L+ Y++AFIAE VRSG+ +V GQME A + GL++ ++ R ++LPQA R +IP Sbjct: 85 FASGTVGLTLYSSAFIAETVRSGIQSVDPGQMEGARSTGLSYWQSMRYIILPQAFRYVIP 144 Query: 326 PLTSQYLNLLKNSS-LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 PL +Q++NL+KNSS LA GF DL+ I + + Q++ + +YL L++ ++ + Sbjct: 145 PLGNQFINLVKNSSVLAFVAGF-DLMYQANVIASDSLQSMSTYMCVGVLYLILTLPLSYY 203 Query: 385 MNRLNAKIA 393 M L K+A Sbjct: 204 MRHLEKKLA 212 Score = 37.7 bits (86), Expect = 3.5, Method: Compositional matrix adjust. Identities = 16/28 (57%), Positives = 19/28 (67%) Query: 122 NKLVAWICRVYVEVFRNIPPLVVIFFLY 149 NK + RVY+EVFRNIP LV+ F Y Sbjct: 45 NKFARVVARVYIEVFRNIPLLVITMFFY 72 >gi|306833827|ref|ZP_07466952.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus bovis ATCC 700338] gi|304424021|gb|EFM27162.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus bovis ATCC 700338] Length = 739 Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 59/209 (28%), Positives = 113/209 (54%), Gaps = 23/209 (11%) Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPTLVLIALKYQ 243 F + V+GI+ + A ++ + + +PL+ ++ F+ +G+P L+ Sbjct: 547 FAIAMVIGIIFGMMAVAPNKVLRTISAVFVDIVRGIPLMIVAAFIFWGIPNLL------- 599 Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 + + G+ + I +F++ IALS A+IAEIVR G+ AVP+GQMEA+ +L Sbjct: 600 ----ESITGRQSPIN------DFVAATIALSLNGGAYIAEIVRGGIEAVPQGQMEASRSL 649 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363 G+++ K + ++LPQA+R ++P +Q++ LK++++ A+G +L G II + Q+ Sbjct: 650 GISYGKTMQKIILPQAIRLMLPNFINQFVISLKDTTIVSAIGLVELFQTGKIIIARNYQS 709 Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392 + I IYL + ++ RL ++ Sbjct: 710 FRVYAILAVIYLVMITLLTRLAKRLEKRL 738 >gi|186477320|ref|YP_001858790.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia phymatum STM815] gi|184193779|gb|ACC71744.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia phymatum STM815] Length = 246 Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 52/126 (41%), Positives = 76/126 (60%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F S I L +TAA + E VRSG+ A+PRGQ A +ALG T + R VLLP A R I+P Sbjct: 111 FSSSIICLGLFTAARVCEQVRSGINALPRGQRGAGLALGFTQWQTYRYVLLPVAYRIIVP 170 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PLTS++LN+ KNS++A +G DL + +++ T Q E + YL +++++ M Sbjct: 171 PLTSEFLNIFKNSAVASTIGLLDLSAQARQLVDYTAQTYESFIAVTVAYLLINLIVMTLM 230 Query: 386 NRLNAK 391 + AK Sbjct: 231 RIVEAK 236 Score = 43.9 bits (102), Expect = 0.041, Method: Compositional matrix adjust. Identities = 28/78 (35%), Positives = 42/78 (53%) Query: 81 SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140 ++Y +L G T ++ S + A I+G+L G R NK +A I VYV +FRNIP Sbjct: 18 EPTTYLGWLLSGLWVTVTVSLSAWVIALIVGSLFGVLRTVPNKKLAAIGTVYVAIFRNIP 77 Query: 141 PLVVIFFLYKSVLSVLPI 158 +V F Y + +LP+ Sbjct: 78 LIVQFFIWYLVIPELLPV 95 >gi|330863399|emb|CBX73521.1| glutamate/aspartate transport system permease protein gltJ [Yersinia enterocolitica W22703] Length = 263 Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 50/129 (38%), Positives = 79/129 (61%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+S + L +TAA + E VR+G+ ++PRGQ A +A+GLT + R VLLP A R IIP Sbjct: 128 FLSSMMCLGLFTAARVCEQVRAGIQSLPRGQKAAGLAMGLTLPQTYRYVLLPNAYRVIIP 187 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 P+TS+ LNL+KNS++A +G D+ + G +++ + A E Y+ ++ +I L M Sbjct: 188 PMTSEMLNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAYESFTAITLGYVLINAVIMLLM 247 Query: 386 NRLNAKIAL 394 + K+ L Sbjct: 248 RIVEKKVQL 256 Score = 42.4 bits (98), Expect = 0.13, Method: Compositional matrix adjust. Identities = 26/77 (33%), Positives = 41/77 (53%) Query: 81 SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140 +++Y I GF T L+ + A +G+L G R N++++ I YVE+FRN+P Sbjct: 34 GNTTYLGWIWSGFQVTVALSLCAWVIAFFVGSLFGILRTVPNRILSSIGACYVELFRNVP 93 Query: 141 PLVVIFFLYKSVLSVLP 157 +V F Y V +LP Sbjct: 94 LIVQFFTWYLVVPELLP 110 >gi|238762871|ref|ZP_04623839.1| Glutamate/aspartate transport system permease protein gltJ [Yersinia kristensenii ATCC 33638] gi|238698882|gb|EEP91631.1| Glutamate/aspartate transport system permease protein gltJ [Yersinia kristensenii ATCC 33638] Length = 246 Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 50/129 (38%), Positives = 79/129 (61%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+S + L +TAA + E VR+G+ ++PRGQ A +A+GLT + R VLLP A R IIP Sbjct: 111 FLSSMMCLGLFTAARVCEQVRAGIQSLPRGQKAAGLAMGLTLPQTYRYVLLPNAYRVIIP 170 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 P+TS+ LNL+KNS++A +G D+ + G +++ + A E Y+ ++ +I L M Sbjct: 171 PMTSEMLNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAYESFTAITLGYVLINAVIMLLM 230 Query: 386 NRLNAKIAL 394 + K+ L Sbjct: 231 RLVEKKVQL 239 Score = 42.0 bits (97), Expect = 0.19, Method: Compositional matrix adjust. Identities = 26/77 (33%), Positives = 41/77 (53%) Query: 81 SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140 +++Y I GF T L+ + A +G+L G R N++++ I YVE+FRN+P Sbjct: 17 GNTTYFGWIWSGFQVTVALSLCAWVIAFFVGSLFGILRTVPNRILSTIGATYVELFRNVP 76 Query: 141 PLVVIFFLYKSVLSVLP 157 +V F Y V +LP Sbjct: 77 LIVQFFTWYLVVPELLP 93 >gi|170702189|ref|ZP_02893095.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria IOP40-10] gi|170132898|gb|EDT01320.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria IOP40-10] Length = 240 Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 48/96 (50%), Positives = 67/96 (69%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 EF++ ++ LS YTAAF+AE +GL V R Q +AA ALGLT ++ R V+LPQA+R + Sbjct: 106 EFVAGWVGLSAYTAAFVAEECEAGLRGVRRAQHDAAAALGLTPMQSLRYVVLPQAVRIAL 165 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 PPL QY+NL+KNSSLA+A+G A+L + +T Sbjct: 166 PPLFGQYMNLVKNSSLAMAIGVAELSYASRQVETET 201 >gi|325978626|ref|YP_004288342.1| amino acid ABC transporter amino acid-binding/permease [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] gi|325178554|emb|CBZ48598.1| amino acid ABC transporter, amino acid-binding/permease protein [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] Length = 745 Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 59/209 (28%), Positives = 113/209 (54%), Gaps = 23/209 (11%) Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPTLVLIALKYQ 243 F + V+GI+ + A ++ + + +PL+ ++ F+ +G+P L+ Sbjct: 553 FAIAMVIGIIFGMMAVAPNKVLRTISAVFVDIVRGIPLMIVAAFIFWGIPNLL------- 605 Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 + + G+ + I +F++ IALS A+IAEIVR G+ AVP+GQMEA+ +L Sbjct: 606 ----ESITGKQSPIN------DFVAATIALSLNGGAYIAEIVRGGIEAVPQGQMEASRSL 655 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363 G+++ K + ++LPQA+R ++P +Q++ LK++++ A+G +L G II + Q+ Sbjct: 656 GISYSKTMQKIILPQAVRLMLPNFINQFVISLKDTTIVSAIGLVELFQTGKIIIARNYQS 715 Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392 + I IYL + ++ RL ++ Sbjct: 716 FRMYAILAVIYLVMITLLTRLAKRLEKRL 744 >gi|238758026|ref|ZP_04619207.1| Glutamate/aspartate transport system permease protein gltJ [Yersinia aldovae ATCC 35236] gi|238703780|gb|EEP96316.1| Glutamate/aspartate transport system permease protein gltJ [Yersinia aldovae ATCC 35236] Length = 246 Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 50/129 (38%), Positives = 79/129 (61%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+S + L +TAA + E VR+G+ ++PRGQ A +A+GLT + R VLLP A R IIP Sbjct: 111 FLSSMMCLGLFTAARVCEQVRAGIQSLPRGQKAAGLAMGLTLPQTYRYVLLPNAYRVIIP 170 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 P+TS+ LNL+KNS++A +G D+ + G +++ + A E Y+ ++ +I L M Sbjct: 171 PMTSEMLNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAYESFTAITLGYVLINAVIMLLM 230 Query: 386 NRLNAKIAL 394 + K+ L Sbjct: 231 RLVEKKVQL 239 Score = 43.5 bits (101), Expect = 0.061, Method: Compositional matrix adjust. Identities = 26/78 (33%), Positives = 42/78 (53%) Query: 81 SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140 +++Y I GF T L+ + A +G+L G R N+L++ I YVE+FRN+P Sbjct: 17 GNTTYFGWIWSGFQVTVALSLCAWVIAFFVGSLFGILRTVPNRLLSGIGTCYVELFRNVP 76 Query: 141 PLVVIFFLYKSVLSVLPI 158 +V F Y + +LP+ Sbjct: 77 LIVQFFTWYLVIPELLPV 94 >gi|78066233|ref|YP_369002.1| ABC polar amino acid transporter, inner membrane subunit [Burkholderia sp. 383] gi|77966978|gb|ABB08358.1| amino acid ABC transporter membrane protein 1, PAAT family [Burkholderia sp. 383] Length = 240 Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 48/96 (50%), Positives = 67/96 (69%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 EF++ ++ LS YTAAF+AE +GL V R Q +AA ALGLT ++ R V+LPQA+R + Sbjct: 106 EFVAGWVGLSAYTAAFVAEECEAGLRGVRRAQHDAAAALGLTPMQSLRYVVLPQAVRIAL 165 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 PPL QY+NL+KNSSLA+A+G A+L + +T Sbjct: 166 PPLFGQYMNLVKNSSLAMAIGVAELSYASRQVETET 201 >gi|116629193|ref|YP_814365.1| ABC-type amino acid transport system, permease component [Lactobacillus gasseri ATCC 33323] gi|282851028|ref|ZP_06260402.1| ABC transporter, permease protein [Lactobacillus gasseri 224-1] gi|300362121|ref|ZP_07058298.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus gasseri JV-V03] gi|311111029|ref|ZP_07712426.1| amino acid ABC transporter, amino acid-binding/permease protein [Lactobacillus gasseri MV-22] gi|116094775|gb|ABJ59927.1| amino acid ABC transporter membrane protein 1, PAAT family [Lactobacillus gasseri ATCC 33323] gi|282557980|gb|EFB63568.1| ABC transporter, permease protein [Lactobacillus gasseri 224-1] gi|300354740|gb|EFJ70611.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus gasseri JV-V03] gi|311066183|gb|EFQ46523.1| amino acid ABC transporter, amino acid-binding/permease protein [Lactobacillus gasseri MV-22] Length = 212 Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 72/207 (34%), Positives = 111/207 (53%), Gaps = 28/207 (13%) Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY----QLHFD 247 FS +LG+ +L K G+A+ +YI F +P LV+ + Y Q+ F Sbjct: 29 FSLILGVGFALLEVA-----PNKFGRAVAHVYIEIFR--NIPLLVITMIFYLVVPQIWFK 81 Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307 F G+ I L+ YT+AFIAE VR+G+ +V GQME A + G+T+ Sbjct: 82 VS-----GFAAGT----------IGLTLYTSAFIAETVRAGINSVGDGQMEGARSNGMTY 126 Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS-LAVAVGFADLVSVGGTIINQTGQAIEI 366 +A R V+LPQA++ +IPPL +Q++NL+KNSS LA GF DL+ I + + I Sbjct: 127 TQAMRYVILPQALKIVIPPLGNQFINLIKNSSVLAFVAGF-DLMYQADVIAFSSFETINT 185 Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIA 393 ++ YL L++ ++ +M L K+A Sbjct: 186 YVVVGLFYLILTLPLSYYMRHLEKKLA 212 >gi|268592305|ref|ZP_06126526.1| glutamate/aspartate ABC transporter, permease protein [Providencia rettgeri DSM 1131] gi|291312086|gb|EFE52539.1| glutamate/aspartate ABC transporter, permease protein [Providencia rettgeri DSM 1131] Length = 250 Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 48/98 (48%), Positives = 70/98 (71%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 EF++ +I L+ YT FIAE +R+G+ V +GQ AA ALGLT +A +LV+LPQA++ + Sbjct: 118 EFLAGFIGLTLYTVPFIAEEIRAGIRGVRQGQKYAAFALGLTSWQAMKLVVLPQAVKIAM 177 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362 PPL QY+N++KNSSL +A+G A+L V + +QT Q Sbjct: 178 PPLLGQYMNVVKNSSLTMAIGVAELSYVSRQVDSQTLQ 215 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 24/66 (36%), Positives = 40/66 (60%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151 GF+ T W++ ++ AT++G +V + + S LV W +Y+ +FRN P LV +FF Y + Sbjct: 27 GFLITIWISICTIVAATVLGFIVASAKDSQITLVRWAVSIYISIFRNTPLLVQLFFWYFA 86 Query: 152 VLSVLP 157 +LP Sbjct: 87 SGEILP 92 >gi|315640805|ref|ZP_07895905.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus italicus DSM 15952] gi|315483417|gb|EFU73913.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus italicus DSM 15952] Length = 215 Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 50/126 (39%), Positives = 78/126 (61%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I L+ YT+AFIAE VRSG+ V GQMEA ++ G T+ + R ++LPQA + +IPPL Q Sbjct: 90 IGLTIYTSAFIAETVRSGIQTVHSGQMEAGLSSGFTYWQTMRYIVLPQAFKIVIPPLGGQ 149 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++NL+KNSS+ V D++ G I + T + +I YL L++ ++ +M+ L Sbjct: 150 FINLIKNSSILAMVAGLDIMYQGDLIASTTFNTFDTYIIVGIFYLILTLPLSYYMSYLEK 209 Query: 391 KIALKE 396 K A++ Sbjct: 210 KWAVRS 215 Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust. Identities = 23/64 (35%), Positives = 38/64 (59%) Query: 86 ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145 A+ + GF T +F +I + IIGTL+ +LS N ++ + + YVE FRN+P L+++ Sbjct: 9 ASLFIDGFKYTILASFIALIASLIIGTLMAILQLSKNNVIRRLAKAYVEFFRNVPLLIIV 68 Query: 146 FFLY 149 Y Sbjct: 69 MIFY 72 >gi|123443207|ref|YP_001007181.1| putative glutamate/aspartate transport system permease [Yersinia enterocolitica subsp. enterocolitica 8081] gi|122090168|emb|CAL13031.1| putative glutamate/aspartate transport system permease [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 246 Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 50/129 (38%), Positives = 79/129 (61%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+S + L +TAA + E VR+G+ ++PRGQ A +A+GLT + R VLLP A R IIP Sbjct: 111 FLSSMMCLGLFTAARVCEQVRAGIQSLPRGQKAAGLAMGLTLPQTYRYVLLPNAYRVIIP 170 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 P+TS+ LNL+KNS++A +G D+ + G +++ + A E Y+ ++ +I L M Sbjct: 171 PMTSEMLNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAYESFTAITLGYVLINAVIMLLM 230 Query: 386 NRLNAKIAL 394 + K+ L Sbjct: 231 RLVEKKVQL 239 Score = 42.0 bits (97), Expect = 0.17, Method: Compositional matrix adjust. Identities = 26/77 (33%), Positives = 41/77 (53%) Query: 81 SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140 +++Y I GF T L+ + A +G+L G R N++++ I YVE+FRN+P Sbjct: 17 GNTTYLGWIWSGFQVTVALSLCAWVIAFFVGSLFGILRTVPNRILSSIGACYVELFRNVP 76 Query: 141 PLVVIFFLYKSVLSVLP 157 +V F Y V +LP Sbjct: 77 LIVQFFTWYLVVPELLP 93 >gi|153833012|ref|ZP_01985679.1| amino acid ABC transporter, permease protein [Vibrio harveyi HY01] gi|148870733|gb|EDL69639.1| amino acid ABC transporter, permease protein [Vibrio harveyi HY01] Length = 265 Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 75/241 (31%), Positives = 124/241 (51%), Gaps = 19/241 (7%) Query: 158 IPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGK 217 +PD+ G + + +T+ +A F+ V+G+V +L RLS + K G Sbjct: 43 VPDYIAFYEDGEWWPAELIEGLIVTLKISAISLFFTLVIGLVTALL--RLS---NSKVGN 97 Query: 218 ALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT 277 A+ Y+ LI P LV I L Y + PV+G F + +ALS + Sbjct: 98 AIGTTYVE--LIRNTPLLVQIYLLYFVF--GPVIGL----------DRFSTAVLALSLFQ 143 Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 A+ AEI R+GL ++P+GQ EAA +LGL+ A + V+LPQ ++ +PPLT++ ++L+KN Sbjct: 144 GAYTAEIFRAGLNSIPKGQFEAAKSLGLSPLFAYKDVILPQVLQRTLPPLTNEVVSLIKN 203 Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 SS+ + DL + I+++T EI IYL+L++ ++ L K+ + Sbjct: 204 SSIVSVMAIFDLTTEARNIVSETAMPFEIWFTVAAIYLALTLSLSGLSAWLEHKLGASWR 263 Query: 398 K 398 K Sbjct: 264 K 264 >gi|91780725|ref|YP_555932.1| polar amino acid ABC transporter inner membrane protein [Burkholderia xenovorans LB400] gi|91693385|gb|ABE36582.1| amino acid ABC transporter membrane protein, PAAT family [Burkholderia xenovorans LB400] Length = 221 Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 76/213 (35%), Positives = 116/213 (54%), Gaps = 19/213 (8%) Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV-LIA 239 LT+ A + V+G+V+ + R+S + K + +Y+ F PTLV LI Sbjct: 23 LTLAVTAVSLAVAIVIGLVIGIM--RISS---KGVLKRVAGVYVEVFR--NTPTLVQLIW 75 Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299 + Y L PVL N SP ++ ALS +AA++AEI R+G+ AVP GQ+EA Sbjct: 76 VYYCL----PVLTGINL------SPTSSCIF-ALSINSAAYVAEIFRAGIQAVPSGQLEA 124 Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359 A ++G+++ KA R ++LPQA+R +IPP +++++LLK SSL +G ADL T+ Sbjct: 125 ARSIGMSYSKAMRKIILPQAVRQMIPPFVNEFVSLLKYSSLVSVLGVADLTYQAQTLSTT 184 Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 T + IEI +Y L I+ + L KI Sbjct: 185 TFRPIEIFTFIGVVYFLLCWAISAAAHVLEQKI 217 Score = 38.5 bits (88), Expect = 2.1, Method: Compositional matrix adjust. Identities = 18/43 (41%), Positives = 29/43 (67%) Query: 107 ATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 A +IG ++G R+S+ ++ + VYVEVFRN P LV + ++Y Sbjct: 35 AIVIGLVIGIMRISSKGVLKRVAGVYVEVFRNTPTLVQLIWVY 77 >gi|172060590|ref|YP_001808242.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia ambifaria MC40-6] gi|171993107|gb|ACB64026.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria MC40-6] Length = 240 Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 48/96 (50%), Positives = 67/96 (69%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 EF++ ++ LS YTAAF+AE +GL V R Q +AA ALGLT ++ R V+LPQA+R + Sbjct: 106 EFVAGWVGLSAYTAAFVAEECEAGLRGVRRAQHDAAAALGLTPMQSLRYVVLPQAVRIAL 165 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 PPL QY+NL+KNSSLA+A+G A+L + +T Sbjct: 166 PPLFGQYMNLVKNSSLAMAIGVAELSYASRQVETET 201 >gi|270290756|ref|ZP_06196980.1| glutamine transport system permease [Pediococcus acidilactici 7_4] gi|270280816|gb|EFA26650.1| glutamine transport system permease [Pediococcus acidilactici 7_4] Length = 216 Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 54/122 (44%), Positives = 81/122 (66%), Gaps = 2/122 (1%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I L+ YT+AFIAE VR+G+ +V GQMEAA + G+T +A R ++LPQA + +IPPL +Q Sbjct: 90 IGLTIYTSAFIAETVRAGIQSVSGGQMEAARSNGMTFSQAMRYIVLPQAFKIVIPPLGNQ 149 Query: 331 YLNLLKNSS-LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 ++NL+KNSS LA GF DL+ VG I + T I L+ +YL +++ ++ +M L Sbjct: 150 FINLVKNSSVLAFVAGF-DLMYVGNDIASTTFDTINSYLVVGVLYLIITMPLSYYMRYLE 208 Query: 390 AK 391 + Sbjct: 209 KR 210 Score = 37.4 bits (85), Expect = 3.7, Method: Compositional matrix adjust. Identities = 22/75 (29%), Positives = 38/75 (50%) Query: 83 SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142 ++++ + G T + + + +IG+L + ++L I R+YVEV RNIP L Sbjct: 6 TNHSAELFSGLGQTLLCSLIALFFSLVIGSLFAIMEVLPSRLARTIGRIYVEVVRNIPLL 65 Query: 143 VVIFFLYKSVLSVLP 157 VV F Y + +P Sbjct: 66 VVTMFFYIVIPRYIP 80 >gi|78044176|ref|YP_359363.1| glutamine ABC transporter permease [Carboxydothermus hydrogenoformans Z-2901] gi|77996291|gb|ABB15190.1| glutamine ABC transporter, permease protein [Carboxydothermus hydrogenoformans Z-2901] Length = 228 Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 67/197 (34%), Positives = 112/197 (56%), Gaps = 10/197 (5%) Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247 KI V + LG ++ LFA L R K + +Y+ I G P LV I + +++ Sbjct: 24 KITVIAVTLGSIIGLFAG-LMRIARNPLLKFIARVYVD--FIRGTPLLVQI---FIIYYG 77 Query: 248 KPVLGQFNFIGGS--TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305 P L GG +SP + + + S + A++AEI R+G+ ++ RGQMEAA +LG+ Sbjct: 78 FPQLWA-ALTGGQPHAISP-WAAAIASTSINSGAYVAEIFRAGIQSIDRGQMEAARSLGM 135 Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365 T+ +A R V+LPQA + +IPPL ++++ +LK++SL +GF +L G II +A E Sbjct: 136 TYGQAMRYVILPQAFKRVIPPLGNEFIAMLKDTSLLSVIGFEELARRGALIIGYNARAFE 195 Query: 366 IILIWMFIYLSLSIMIA 382 + +YL ++++I+ Sbjct: 196 VWFAVAILYLIMTLLIS 212 Score = 38.1 bits (87), Expect = 2.7, Method: Compositional matrix adjust. Identities = 19/43 (44%), Positives = 26/43 (60%) Query: 107 ATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 +IIG G R++ N L+ +I RVYV+ R P LV IF +Y Sbjct: 33 GSIIGLFAGLMRIARNPLLKFIARVYVDFIRGTPLLVQIFIIY 75 >gi|306831687|ref|ZP_07464844.1| glutamine ABC superfamily ATP binding cassette transporter permease protein [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|261411856|gb|ACX81324.1| Sbs9 [Streptococcus gallolyticus subsp. gallolyticus] gi|304426112|gb|EFM29227.1| glutamine ABC superfamily ATP binding cassette transporter permease protein [Streptococcus gallolyticus subsp. gallolyticus TX20005] Length = 745 Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 59/209 (28%), Positives = 113/209 (54%), Gaps = 23/209 (11%) Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPTLVLIALKYQ 243 F + V+GI+ + A ++ + + +PL+ ++ F+ +G+P L+ Sbjct: 553 FAIAMVIGIIFGMMAVAPNKVLRTISAVFVDIVRGIPLMIVAAFIFWGIPNLL------- 605 Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 + + G+ + I +F++ IALS A+IAEIVR G+ AVP+GQMEA+ +L Sbjct: 606 ----ESITGKQSPIN------DFVAATIALSLNGGAYIAEIVRGGIEAVPQGQMEASRSL 655 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363 G+++ K + ++LPQA+R ++P +Q++ LK++++ A+G +L G II + Q+ Sbjct: 656 GISYSKTMQKIILPQAVRLMLPNFINQFVISLKDTTIVSAIGLVELFQTGKIIIARNYQS 715 Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392 + I IYL + ++ RL ++ Sbjct: 716 FRMYAILAVIYLVIITLLTRLAKRLEKRL 744 >gi|223932270|ref|ZP_03624273.1| polar amino acid ABC transporter, inner membrane subunit [Streptococcus suis 89/1591] gi|223898951|gb|EEF65309.1| polar amino acid ABC transporter, inner membrane subunit [Streptococcus suis 89/1591] Length = 732 Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 66/216 (30%), Positives = 115/216 (53%), Gaps = 25/216 (11%) Query: 168 GMFLNNRG--LSFPTLTMDTNAKIFVFSFVLGIVLSLFAT------RLSRHFHEKTGKAL 219 G+ NN G LS +T+ F + V+GI+ +FA R++ + + Sbjct: 516 GLLKNNYGQLLSGLGITIGLALLSFAIAIVIGIIFGMFAVSPVKALRVTSSVFVDVVRGI 575 Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279 PL+ ++ F+ +G+P L+ + + GQ + I +F++ IALS + A Sbjct: 576 PLMIVAAFIFWGIPNLI-----------ESITGQQSPIN------DFVAGTIALSLNSGA 618 Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339 +IAEIVR G+ AVP GQMEA+ +LG+++ R ++LPQA + ++P +Q++ LK+++ Sbjct: 619 YIAEIVRGGIQAVPAGQMEASRSLGISYGTTMRKIILPQAGKIMLPNFINQFVITLKDTT 678 Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375 + A+G +L G II + Q+ + I IYL Sbjct: 679 IISAIGLVELFQAGKIIIARNYQSFRMYAILAIIYL 714 >gi|297202327|ref|ZP_06919724.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Streptomyces sviceus ATCC 29083] gi|197710153|gb|EDY54187.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Streptomyces sviceus ATCC 29083] Length = 312 Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 69/209 (33%), Positives = 112/209 (53%), Gaps = 9/209 (4%) Query: 189 IFVFSFVLGIVLS--LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246 I + + ++G+VL L RLS++ + YI F G P V + L + L Sbjct: 81 ISILAMIVGVVLGVLLAVMRLSKN---PVTSWVAWAYIWFFR--GTPVYVQLLLWFNLAL 135 Query: 247 DKPVL--GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304 P+L G + V FM + L AA++AEI R+GL+AV GQ EAA ALG Sbjct: 136 IFPMLNLGPIYKDEMTDVMTPFMCALLGLGLNEAAYMAEICRAGLMAVDEGQTEAAHALG 195 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364 ++H K R +++PQAMR I+PP ++++N+LK SSL AV + +L+ TI + + + Sbjct: 196 MSHGKTLRRIVIPQAMRVIVPPTGNEFINMLKTSSLVYAVTYNELLRATSTIGSTSYAVM 255 Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIA 393 E++ + YL ++ + ++F L + A Sbjct: 256 EMLFVASIWYLVMTSVFSVFQYYLERRFA 284 Score = 37.0 bits (84), Expect = 6.2, Method: Compositional matrix adjust. Identities = 17/59 (28%), Positives = 29/59 (49%) Query: 82 DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140 D + + +L G T ++ MI ++G L+ RLS N + +W+ Y+ FR P Sbjct: 64 DKLFDSTVLAGAGRTLLISILAMIVGVVLGVLLAVMRLSKNPVTSWVAWAYIWFFRGTP 122 >gi|134295677|ref|YP_001119412.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia vietnamiensis G4] gi|134138834|gb|ABO54577.1| amino acid ABC transporter membrane protein 1, PAAT family [Burkholderia vietnamiensis G4] Length = 262 Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 48/96 (50%), Positives = 67/96 (69%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 EF++ ++ LS YTAAF+AE +GL V R Q +AA ALGLT ++ R V+LPQA+R + Sbjct: 128 EFVAGWVGLSAYTAAFVAEECEAGLRGVRRAQHDAAAALGLTPMQSLRYVVLPQAVRIAL 187 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 PPL QY+NL+KNSSLA+A+G A+L + +T Sbjct: 188 PPLFGQYMNLVKNSSLAMAIGVAELSYASRQVETET 223 >gi|330832852|ref|YP_004401677.1| polar amino acid ABC transporter inner membrane subunit [Streptococcus suis ST3] gi|329307075|gb|AEB81491.1| polar amino acid ABC transporter, inner membrane subunit [Streptococcus suis ST3] Length = 732 Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 66/216 (30%), Positives = 115/216 (53%), Gaps = 25/216 (11%) Query: 168 GMFLNNRG--LSFPTLTMDTNAKIFVFSFVLGIVLSLFAT------RLSRHFHEKTGKAL 219 G+ NN G LS +T+ F + V+GI+ +FA R++ + + Sbjct: 516 GLLKNNYGQLLSGLGITIGLALLSFAIAIVIGIIFGMFAVSPVKALRVTSSVFVDVVRGI 575 Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279 PL+ ++ F+ +G+P L+ + + GQ + I +F++ IALS + A Sbjct: 576 PLMIVAAFIFWGIPNLI-----------ESITGQQSPIN------DFVAGTIALSLNSGA 618 Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339 +IAEIVR G+ AVP GQMEA+ +LG+++ R ++LPQA + ++P +Q++ LK+++ Sbjct: 619 YIAEIVRGGIQAVPAGQMEASRSLGISYGTTMRKIILPQAGKIMLPNFINQFVITLKDTT 678 Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375 + A+G +L G II + Q+ + I IYL Sbjct: 679 IISAIGLVELFQAGKIIIARNYQSFRMYAILAIIYL 714 >gi|313894837|ref|ZP_07828397.1| glutamine ABC transporter, permease protein GlnP [Selenomonas sp. oral taxon 137 str. F0430] gi|312976518|gb|EFR41973.1| glutamine ABC transporter, permease protein GlnP [Selenomonas sp. oral taxon 137 str. F0430] Length = 219 Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 72/217 (33%), Positives = 117/217 (53%), Gaps = 15/217 (6%) Query: 177 SFPTLTMDTNA--KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234 SFP L + +I V S +G ++ L ++R K + L +Y+ F G P Sbjct: 11 SFPLLLVGAGVTIQITVLSTTIGFIVGLIVA-VARISKLKPLRMLAEVYVEFFR--GTPL 67 Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294 LV I L Y F PV I G + P F++ A + A++AEI R+G+ +V Sbjct: 68 LVQIFLFY---FALPV------ITGQRIDP-FIAAISACGINSGAYVAEIFRAGIQSVDA 117 Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354 GQMEA +LG+T + R +++PQA + +IPPL ++++ +LK+SSL +GF +L G Sbjct: 118 GQMEAGRSLGMTWIQTMRYIIVPQAFKRVIPPLGNEFIAMLKDSSLVSVIGFEELTRRGQ 177 Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 II +T ++EI L IYL++++ I+ + L + Sbjct: 178 LIIAKTYGSMEIWLSVAVIYLAMTLTISRLVAYLERR 214 >gi|296162981|ref|ZP_06845758.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. Ch1-1] gi|295886775|gb|EFG66616.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. Ch1-1] Length = 246 Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 51/129 (39%), Positives = 77/129 (59%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F S I L +TAA + E VRSG+ A+PRGQ A +A+G T + R VLLP A R I+P Sbjct: 111 FSSSIICLGLFTAARVCEQVRSGINALPRGQRAAGLAMGFTQWQTYRYVLLPVAYRIIVP 170 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PLTS++LN+ KNS++A +G DL + +++ T Q E + Y+ +++++ M Sbjct: 171 PLTSEFLNIFKNSAVASTIGLLDLSAQARQLVDYTSQTYESFIAVTVAYMLINLVVMQLM 230 Query: 386 NRLNAKIAL 394 + AK L Sbjct: 231 RWVEAKTRL 239 Score = 44.7 bits (104), Expect = 0.029, Method: Compositional matrix adjust. Identities = 27/78 (34%), Positives = 42/78 (53%) Query: 81 SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140 ++Y +L GF T ++ S + A I+G+L G R NK + I +YV +FRNIP Sbjct: 18 EPTTYLGWLLSGFWVTITVSLSAWVIALIVGSLFGVLRTVPNKWASGIGTLYVAIFRNIP 77 Query: 141 PLVVIFFLYKSVLSVLPI 158 +V F Y + +LP+ Sbjct: 78 LIVQFFIWYLVIPELLPV 95 >gi|295677663|ref|YP_003606187.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. CCGE1002] gi|295437506|gb|ADG16676.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. CCGE1002] Length = 246 Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 53/133 (39%), Positives = 80/133 (60%), Gaps = 1/133 (0%) Query: 263 SPEFMSLYI-ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321 S +F S I L +TAA + E VRSG+ A+PRGQ A +A+G T + R VLLP A R Sbjct: 107 SAQFFSASIVCLGLFTAARVCEQVRSGINALPRGQRAAGLAVGFTQWQTYRYVLLPVAYR 166 Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 I+PPLTS++LN+ KNS++A +G DL + +++ T Q E + Y+ +++++ Sbjct: 167 IIVPPLTSEFLNIFKNSAVASTIGLLDLSAQARQLVDYTSQTYESFIAVTVAYMLINLVV 226 Query: 382 ALFMNRLNAKIAL 394 L M + AK L Sbjct: 227 MLLMRWVEAKTRL 239 Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust. Identities = 26/78 (33%), Positives = 41/78 (52%) Query: 81 SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140 ++Y +L G T ++ S + A I+G+L G R NK + + VYV +FRNIP Sbjct: 18 EPTTYLGWLLSGLWVTVTVSLSAWVIALIVGSLFGVLRTVPNKWASGVGTVYVAIFRNIP 77 Query: 141 PLVVIFFLYKSVLSVLPI 158 +V F Y + +LP+ Sbjct: 78 LIVQFFIWYLVIPELLPV 95 >gi|116492194|ref|YP_803929.1| ABC-type amino acid transport system, permease component [Pediococcus pentosaceus ATCC 25745] gi|116102344|gb|ABJ67487.1| amino acid ABC transporter membrane protein 1, PAAT family [Pediococcus pentosaceus ATCC 25745] Length = 216 Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 67/207 (32%), Positives = 112/207 (54%), Gaps = 32/207 (15%) Query: 192 FSFVLGIVLSLFATRLSRHFHE------KTGKALPLLYISTFLIFGLPTLVLIALKYQLH 245 FS ++G + ++F S+ H + + +PLL ++ F +P +Y Sbjct: 29 FSLIIGSMFAIFEVLPSKVLHTIGRIYVEVVRNIPLLVVTMFFYIVIP-------QYVAS 81 Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305 + F+ G+ I L+ YT+AFIAE VR+G+ +V GQMEAA + G+ Sbjct: 82 IN-------GFVAGT----------IGLTIYTSAFIAETVRAGIQSVSGGQMEAARSNGM 124 Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS-LAVAVGFADLVSVGGTIINQTGQAI 364 T+ +A R ++LPQA + +IPPL +Q++NL+KNSS LA GF DL+ VG I + + I Sbjct: 125 TYWQAMRYIVLPQAFKIVIPPLGNQFINLVKNSSVLAFVAGF-DLMYVGNDIASTSFDTI 183 Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAK 391 L+ +YL +++ ++ +M L + Sbjct: 184 NSYLVVGVMYLIITMPLSYYMRYLEKR 210 Score = 38.5 bits (88), Expect = 1.8, Method: Compositional matrix adjust. Identities = 23/67 (34%), Positives = 37/67 (55%) Query: 83 SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142 +S+ + +L G T + + + IIG++ + +K++ I R+YVEV RNIP L Sbjct: 6 ASHGSELLSGLGQTVLCSVIALFFSLIIGSMFAIFEVLPSKVLHTIGRIYVEVVRNIPLL 65 Query: 143 VVIFFLY 149 VV F Y Sbjct: 66 VVTMFFY 72 >gi|327382993|gb|AEA54469.1| Arginine/histidine ABC superfamily ATP binding cassette transporter permease [Lactobacillus casei LC2W] gi|327386181|gb|AEA57655.1| Arginine/histidine ABC superfamily ATP binding cassette transporter permease [Lactobacillus casei BD-II] Length = 220 Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 59/167 (35%), Positives = 94/167 (56%), Gaps = 30/167 (17%) Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPT 234 +T++ + FSF+LG++L L ++F G + LPLL I F F LP Sbjct: 22 VTLEVSIVSIFFSFILGVILGLARYVKIKYFSAIVGFVIDVIRNLPLLLILFFTYFALPD 81 Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294 + + + N + + IA+S + +A +AEIVRSG+ AVPR Sbjct: 82 IGI---------------RLNVVAAAI---------IAMSIFESAMLAEIVRSGINAVPR 117 Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341 GQMEAA + GLT +A R +++PQA++ +IPP+ SQ+++L+K++SLA Sbjct: 118 GQMEAARSNGLTFYQAMRYIIMPQALKKMIPPIVSQFISLVKDTSLA 164 >gi|269797857|ref|YP_003311757.1| polar amino acid ABC transporter inner membrane subunit [Veillonella parvula DSM 2008] gi|269094486|gb|ACZ24477.1| polar amino acid ABC transporter, inner membrane subunit [Veillonella parvula DSM 2008] Length = 218 Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 69/215 (32%), Positives = 120/215 (55%), Gaps = 17/215 (7%) Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240 +T++ A F +G+++SL LS+ K + L Y+ +I G P LV I L Sbjct: 21 VTVEITAMSVGCGFFIGLLVSL--ANLSKF---KLVRLLAKCYVD--IIRGTPLLVQIFL 73 Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300 ++F P+ I G + P +++ A S + A+++EI R+G+ ++ +GQMEA Sbjct: 74 ---IYFALPM------ITGQRIDP-YIAAVTACSINSGAYVSEIFRAGIQSIDKGQMEAG 123 Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 +LGLT + R +++PQA ++IIPPL ++++ +LK+SSL +GF +L G II +T Sbjct: 124 RSLGLTWGQTMRYIIMPQAFKAIIPPLGNEFIAMLKDSSLVSVIGFEELTRRGQLIIAKT 183 Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395 + EI IYL +++ I+ + L K ++K Sbjct: 184 YASFEIWGTVAVIYLIMTVTISQLVGYLERKYSIK 218 >gi|191638945|ref|YP_001988111.1| Glutamine transport system permease protein [Lactobacillus casei BL23] gi|190713247|emb|CAQ67253.1| Glutamine transport system permease protein [Lactobacillus casei BL23] Length = 220 Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 59/167 (35%), Positives = 94/167 (56%), Gaps = 30/167 (17%) Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPT 234 +T++ + FSF+LG++L L ++F G + LPLL I F F LP Sbjct: 22 VTLEVSIVSIFFSFILGVILGLARYVKIKYFSAIVGFVIDVIRNLPLLLILFFTYFALPD 81 Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294 + + + N + + IA+S + +A +AEIVRSG+ AVPR Sbjct: 82 IGI---------------RLNVVAAAI---------IAMSIFESAMLAEIVRSGINAVPR 117 Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341 GQMEAA + GLT +A R +++PQA++ +IPP+ SQ+++L+K++SLA Sbjct: 118 GQMEAARSNGLTFYQAMRYIIMPQALKKMIPPIVSQFISLVKDTSLA 164 >gi|116495482|ref|YP_807216.1| ABC-type amino acid transport system, permease component [Lactobacillus casei ATCC 334] gi|227534091|ref|ZP_03964140.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|301066995|ref|YP_003789018.1| amino acid ABC transporter permease [Lactobacillus casei str. Zhang] gi|116105632|gb|ABJ70774.1| amino acid ABC transporter membrane protein 2, PAAT family [Lactobacillus casei ATCC 334] gi|227188272|gb|EEI68339.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|300439402|gb|ADK19168.1| ABC-type amino acid transport system, permease component [Lactobacillus casei str. Zhang] Length = 220 Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 59/167 (35%), Positives = 94/167 (56%), Gaps = 30/167 (17%) Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPT 234 +T++ + FSF+LG++L L ++F G + LPLL I F F LP Sbjct: 22 VTLEVSIVSIFFSFILGVILGLARYVKIKYFSAIVGFVIDLIRNLPLLLILFFTYFALPD 81 Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294 + + + N + + IA+S + +A +AEIVRSG+ AVPR Sbjct: 82 IGI---------------RLNVVAAAI---------IAMSIFESAMLAEIVRSGINAVPR 117 Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341 GQMEAA + GLT +A R +++PQA++ +IPP+ SQ+++L+K++SLA Sbjct: 118 GQMEAARSNGLTFYQAMRYIIMPQALKKMIPPIVSQFISLVKDTSLA 164 >gi|239629874|ref|ZP_04672905.1| ABC-type amino acid transport system protein [Lactobacillus paracasei subsp. paracasei 8700:2] gi|239527486|gb|EEQ66487.1| ABC-type amino acid transport system protein [Lactobacillus paracasei subsp. paracasei 8700:2] Length = 220 Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 59/167 (35%), Positives = 94/167 (56%), Gaps = 30/167 (17%) Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPT 234 +T++ + FSF+LG++L L ++F G + LPLL I F F LP Sbjct: 22 VTLEVSIVSIFFSFILGVILGLARYVKIKYFSAIVGFVIDLIRNLPLLLILFFTYFALPD 81 Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294 + + + N + + IA+S + +A +AEIVRSG+ AVPR Sbjct: 82 IGI---------------RLNVVAAAI---------IAMSIFESAMLAEIVRSGINAVPR 117 Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341 GQMEAA + GLT +A R +++PQA++ +IPP+ SQ+++L+K++SLA Sbjct: 118 GQMEAARSNGLTFYQAMRYIIMPQALKKMIPPIVSQFISLVKDTSLA 164 >gi|222529919|ref|YP_002573801.1| polar amino acid ABC transporter inner membrane subunit [Caldicellulosiruptor bescii DSM 6725] gi|222456766|gb|ACM61028.1| polar amino acid ABC transporter, inner membrane subunit [Caldicellulosiruptor bescii DSM 6725] Length = 220 Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 65/226 (28%), Positives = 116/226 (51%), Gaps = 32/226 (14%) Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSR--------HFHEKTGKALPLLYISTFLIFGL 232 +T++ A V G+V +LF R+S+ F+ + PLL F+ +GL Sbjct: 19 VTIELTAIAVTIGLVFGLVAALF--RISKIKLLNYIGSFYVWLFRGTPLLLQIFFIYYGL 76 Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292 P ++ P L P F++ IAL + A+ AEI+R+ ++++ Sbjct: 77 PKII------------PAL----------TLPAFLAGAIALIINSGAYTAEIIRAAILSI 114 Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352 RGQ EAA ALG+T+ + R V++PQ + +IPP+ ++++ LLK+SSL +G +L+ Sbjct: 115 DRGQYEAAKALGMTYLQTMRYVIVPQTYKRLIPPIGNEFIALLKDSSLVSTIGMVELMRA 174 Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 + TG+ EI + + IYL+L+ + + N L ++ E++ Sbjct: 175 AQLKASATGRDAEIYIAALVIYLALTTVFSTIFNWLEKRLGKYEQR 220 >gi|221212965|ref|ZP_03585941.1| ABC polar amino acid transporter, inner membrane subunit [Burkholderia multivorans CGD1] gi|221167178|gb|EED99648.1| ABC polar amino acid transporter, inner membrane subunit [Burkholderia multivorans CGD1] Length = 240 Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 48/96 (50%), Positives = 67/96 (69%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 EF++ ++ LS YTAAF+AE +GL V R Q +AA ALGLT ++ R V+LPQA+R + Sbjct: 106 EFVAGWVGLSAYTAAFVAEECEAGLRGVRRAQHDAAAALGLTPLQSLRYVVLPQAVRIAL 165 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 PPL QY+NL+KNSSLA+A+G A+L + +T Sbjct: 166 PPLFGQYMNLVKNSSLAMAIGVAELSYASRQVETET 201 >gi|91785181|ref|YP_560387.1| His/Glu/Gln/Arg/opine ABC transporter inner membrane protein [Burkholderia xenovorans LB400] gi|91689135|gb|ABE32335.1| L-glutamate ABC transporter membrane protein / L-aspartate ABC transporter membrane protein [Burkholderia xenovorans LB400] Length = 246 Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 51/129 (39%), Positives = 77/129 (59%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F S I L +TAA + E VRSG+ A+PRGQ A +A+G T + R VLLP A R I+P Sbjct: 111 FSSSIICLGLFTAARVCEQVRSGINALPRGQRAAGLAMGFTQWQTYRYVLLPVAYRIIVP 170 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PLTS++LN+ KNS++A +G DL + +++ T Q E + Y+ +++++ M Sbjct: 171 PLTSEFLNIFKNSAVASTIGLLDLSAQARQLVDYTSQTYESFIAVTVAYMLINLVVMQLM 230 Query: 386 NRLNAKIAL 394 + AK L Sbjct: 231 RWVEAKTRL 239 Score = 44.7 bits (104), Expect = 0.028, Method: Compositional matrix adjust. Identities = 27/78 (34%), Positives = 42/78 (53%) Query: 81 SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140 ++Y +L GF T ++ S + A I+G+L G R NK + I +YV +FRNIP Sbjct: 18 EPTTYLGWLLSGFWVTITVSLSAWVIALIVGSLFGVLRTVPNKWASGIGTLYVAIFRNIP 77 Query: 141 PLVVIFFLYKSVLSVLPI 158 +V F Y + +LP+ Sbjct: 78 LIVQFFIWYLVIPELLPV 95 >gi|328950983|ref|YP_004368318.1| polar amino acid ABC transporter, inner membrane subunit [Marinithermus hydrothermalis DSM 14884] gi|328451307|gb|AEB12208.1| polar amino acid ABC transporter, inner membrane subunit [Marinithermus hydrothermalis DSM 14884] Length = 283 Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 71/220 (32%), Positives = 122/220 (55%), Gaps = 20/220 (9%) Query: 184 DTNAKIFVFSFVLGIVLSLFA--TRLSRHFHEKTGKALPLL-YISTFLIF---GLPTLVL 237 + K+ V S + G+++ L A +RLSR+ PL Y + F I+ G P LV Sbjct: 67 EVTLKLTVISSIAGLIIGLVAGISRLSRN---------PLFRYPAAFYIWVIRGTPLLVQ 117 Query: 238 IALKYQ-LHFD-KPVLGQFNFIGGSTVSP---EFMSLYIALSCYTAAFIAEIVRSGLIAV 292 I Y L F P+ +G ++ + + ++AL+ A+ AE++R+G+ A+ Sbjct: 118 ILFAYNGLPFLLDPLWRPLEALGLPSIQDILVPYWAAFLALAFNVGAYNAEVIRAGIQAI 177 Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352 +GQ EAA +LGL+ + R +++PQA+R ++PPL + + LLK+SSLA+A+ +LV Sbjct: 178 SKGQWEAAHSLGLSPAQVMRYIVIPQAVRIVVPPLVNNVIALLKDSSLAMAITLLELVLA 237 Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 G II+ T + +EI + +YL L+ ++ F N L ++ Sbjct: 238 GQRIISATFRPVEIYVAVAMVYLILTTVLTFFTNWLERRL 277 >gi|270307788|ref|YP_003329846.1| amino acid ABC transporter, permease protein [Dehalococcoides sp. VS] gi|270153680|gb|ACZ61518.1| amino acid ABC transporter, permease protein [Dehalococcoides sp. VS] Length = 273 Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 59/186 (31%), Positives = 105/186 (56%), Gaps = 20/186 (10%) Query: 191 VFSFVLGIVLSLFAT--RLSRH--------FHEKTGKALPLLYISTFLIFGLPTLVLIAL 240 V S+ L ++ LF RLS++ F+ + + +PLL + F P ++ ++ Sbjct: 68 VVSYFLMLIFGLFGALGRLSKNTILRGLATFYVEIVRGIPLLVQLIWWYFAFPVIIQ-SI 126 Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300 L+F + Q N P M+++ CY A+++EI R+G+ ++P+GQMEAA Sbjct: 127 GQGLNFGPMMNYQAN--------PIVMAIWGMTFCY-GAYMSEIYRAGIQSIPKGQMEAA 177 Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 +LG++H +A R V+LPQA+R ++PP+ +++++LLK++SL V AD+V +G Sbjct: 178 RSLGMSHTQAMRFVILPQALRVVLPPMGNEFISLLKDTSLVSTVAVADMVRLGREFTATN 237 Query: 361 GQAIEI 366 IE+ Sbjct: 238 FNPIEV 243 >gi|209547158|ref|YP_002279076.1| polar amino acid ABC transporter inner membrane protein [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209538402|gb|ACI58336.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 290 Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 71/220 (32%), Positives = 119/220 (54%), Gaps = 10/220 (4%) Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240 LT++ A VF LG +L++ AT S +F KA+ ++ F G+P +V I L Sbjct: 69 LTLELTAGAMVFGISLGCLLAVMAT--STNF---VLKAIAAGFVWWFR--GVPLIVQIFL 121 Query: 241 KYQLHFDKPVLG--QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQME 298 + + P +G ++ V+P ++AL + AA ++EI+RSGL+A+ RGQ E Sbjct: 122 WFNIALFIPQVGVGHYSISINDLVTPALAG-FLALGLHEAANMSEIIRSGLLAIDRGQRE 180 Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN 358 AA ALGL R+ R V+LPQA R IIPP +Q + +LK S++ +G DL++ I Sbjct: 181 AATALGLKSRQTFRTVILPQAARLIIPPTGNQAIGMLKASAIVSVIGMQDLLTQAQVIYA 240 Query: 359 QTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 + IE++ + YL+++ + ++ + L + K + Sbjct: 241 RNFLVIELLFVASIWYLAITTVASIGQHYLEKSLQPKYRN 280 >gi|300937879|ref|ZP_07152671.1| ABC transporter, permease protein [Escherichia coli MS 21-1] gi|300457104|gb|EFK20597.1| ABC transporter, permease protein [Escherichia coli MS 21-1] Length = 255 Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 49/129 (37%), Positives = 80/129 (62%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+S + L +TAA + E VR+ + ++PRGQ AA+A+GLT +A R VLLP A R I+P Sbjct: 120 FLSSMLCLGLFTAARVCEQVRAAIQSLPRGQKNAALAMGLTLPQAYRYVLLPNAYRVIVP 179 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 P+TS+ +NL+KNS++A +G D+ + G +++ + A E Y+ ++ +I L M Sbjct: 180 PMTSEMMNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAWESFTAITLAYVLINAVIMLVM 239 Query: 386 NRLNAKIAL 394 + K+ L Sbjct: 240 TLVERKVRL 248 Score = 40.0 bits (92), Expect = 0.59, Method: Compositional matrix adjust. Identities = 24/77 (31%), Positives = 41/77 (53%) Query: 81 SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140 +++Y I GF T L+ I A ++G+ G R N+ ++ + +YVE+FRN+P Sbjct: 26 GNTTYLGWIWSGFQVTIALSICAWIIAFLVGSFFGILRTVPNRFLSGLGTLYVELFRNVP 85 Query: 141 PLVVIFFLYKSVLSVLP 157 +V F Y + +LP Sbjct: 86 LIVQFFTWYLVIPELLP 102 >gi|300087519|ref|YP_003758041.1| polar amino acid ABC transporter inner membrane subunit [Dehalogenimonas lykanthroporepellens BL-DC-9] gi|299527252|gb|ADJ25720.1| polar amino acid ABC transporter, inner membrane subunit [Dehalogenimonas lykanthroporepellens BL-DC-9] Length = 275 Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 75/212 (35%), Positives = 116/212 (54%), Gaps = 18/212 (8%) Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252 +++L +V+ LF L R K L +Y+ +I G+P LV + Y F PV+ Sbjct: 72 AYLLMLVVGLFGG-LGRLAKNKFIFGLATIYVE--VIRGIPLLVQLIGWY---FASPVVI 125 Query: 253 Q-----FNF--IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305 Q NF + +P ++ CY A+++EIVR+G+ +VP+GQMEAA +LG+ Sbjct: 126 QAVGEWLNFAPLMEYRANPIVTAIIAITVCY-GAYMSEIVRAGIQSVPKGQMEAARSLGM 184 Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365 H +A R V+LPQA R I+PP+ ++++ LLK+SSL V ADL G ++ IE Sbjct: 185 NHFQAMRFVILPQAFRVILPPMGNEFIALLKDSSLVSVVAVADLTRRGREFMSAHFNPIE 244 Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 W + L L +++ LF +RL + I K K Sbjct: 245 ---TWTMVAL-LYLIMTLFASRLVSYIEKKTK 272 >gi|46580745|ref|YP_011553.1| His/Glu/Gln/Arg/opine ABC transporter permease [Desulfovibrio vulgaris str. Hildenborough] gi|120601967|ref|YP_966367.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio vulgaris DP4] gi|46450165|gb|AAS96813.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Desulfovibrio vulgaris str. Hildenborough] gi|120562196|gb|ABM27940.1| amino acid ABC transporter membrane protein 2, PAAT family [Desulfovibrio vulgaris DP4] gi|311234459|gb|ADP87313.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio vulgaris RCH1] Length = 230 Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 70/208 (33%), Positives = 114/208 (54%), Gaps = 20/208 (9%) Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV-L 251 +F LG+ L RLS + + A ++Y+ +I G+P L+LI + +F P+ L Sbjct: 40 AFWLGLAFGLM--RLSEKWWVR---APAIVYVE--VIRGIPLLMLI---FWFYFLAPIAL 89 Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311 G PE S IA +T A+IAEIVR+G++A+P GQMEAA GL+ +A Sbjct: 90 GH--------TLPEAESALIAFIVFTGAYIAEIVRAGVLALPAGQMEAARGTGLSKTQAM 141 Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA-IEIILIW 370 V+LPQA+R++IP +Q+++L K++SLA +G ++L + N+T A EI L Sbjct: 142 LFVILPQALRNMIPSFVNQFVSLTKDTSLAYIIGVSELTRTATQVNNRTLTAPTEIFLTI 201 Query: 371 MFIYLSLSIMIALFMNRLNAKIALKEKK 398 +Y + ++ RL ++A + + Sbjct: 202 ALMYFVICWVLTATSRRLEKQMARYQAR 229 Score = 36.2 bits (82), Expect = 9.5, Method: Compositional matrix adjust. Identities = 26/67 (38%), Positives = 32/67 (47%) Query: 83 SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142 SY L G + LA G+ A +G G RLS V VYVEV R IP L Sbjct: 16 GSYPDGPLGGMAMSILLAIGGIFGAFWLGLAFGLMRLSEKWWVRAPAIVYVEVIRGIPLL 75 Query: 143 VVIFFLY 149 ++IF+ Y Sbjct: 76 MLIFWFY 82 >gi|15903163|ref|NP_358713.1| amino acid ABC transporter permease/amino acid-binding protein [Streptococcus pneumoniae R6] gi|15458747|gb|AAK99923.1| ABC transporter membrane spanning permease - glutamine transport [Streptococcus pneumoniae R6] Length = 721 Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 61/209 (29%), Positives = 111/209 (53%), Gaps = 23/209 (11%) Query: 190 FVFSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243 F + V+GI+ +F+ R+ + +PL+ ++ F+ +G+P Sbjct: 529 FAIAIVIGIIFGMFSVSPYKSLRVISEIFVDVIRGIPLMILAAFIFWGIP---------- 578 Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 +F + + GQ + I +F++ IALS AA+IAEIVR G+ AVP GQMEA+ +L Sbjct: 579 -NFIESITGQQSPIN------DFVAGTIALSLNAAAYIAEIVRGGIQAVPVGQMEASRSL 631 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363 G+++ K R ++LPQ + ++P +Q++ LK++++ A+G +L G II + Q+ Sbjct: 632 GISYGKTMRKIILPQVTKLMLPNFVNQFVIALKDTTIVSAIGLVELFQTGKIIIARNYQS 691 Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392 ++ I YL + ++ RL +I Sbjct: 692 FKMYAILAIFYLVIITLLTRLAKRLEKRI 720 >gi|302023820|ref|ZP_07249031.1| glutamine ABC transporter, glutamine-binding protein/permease protein [Streptococcus suis 05HAS68] Length = 643 Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 66/216 (30%), Positives = 115/216 (53%), Gaps = 25/216 (11%) Query: 168 GMFLNNRG--LSFPTLTMDTNAKIFVFSFVLGIVLSLFAT------RLSRHFHEKTGKAL 219 G+ NN G LS +T+ F + V+GI+ +FA R++ + + Sbjct: 427 GLLKNNYGQLLSGLGITIGLALLSFAIAIVIGIIFGMFAVSPVKALRVTSSVFVDVVRGI 486 Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279 PL+ ++ F+ +G+P L+ + + GQ + I +F++ IALS + A Sbjct: 487 PLMIVAAFIFWGIPNLI-----------ESITGQQSPIN------DFVAGTIALSLNSGA 529 Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339 +IAEIVR G+ AVP GQMEA+ +LG+++ R ++LPQA + ++P +Q++ LK+++ Sbjct: 530 YIAEIVRGGIQAVPAGQMEASRSLGISYGTTMRKIILPQAGKIMLPNFINQFVITLKDTT 589 Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375 + A+G +L G II + Q+ + I IYL Sbjct: 590 IISAIGLVELFQAGKIIIARNYQSFRMYAILAIIYL 625 >gi|330823279|ref|YP_004386582.1| polar amino acid ABC transporter inner membrane subunit [Alicycliphilus denitrificans K601] gi|329308651|gb|AEB83066.1| polar amino acid ABC transporter, inner membrane subunit [Alicycliphilus denitrificans K601] Length = 250 Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 56/134 (41%), Positives = 83/134 (61%), Gaps = 4/134 (2%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P F+ + AL +T+A IAE VRSG+ A+PRGQ A +A+G T + R VLLP A R I Sbjct: 109 PGFVLVVFALGFFTSARIAEQVRSGIQALPRGQRYAGMAMGFTTVQYYRYVLLPMAFRII 168 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 IPPLTS+ +N+ KNSS+A AV ++L + +T + IE+ L + +L ++ AL Sbjct: 169 IPPLTSETMNIFKNSSVAFAVSVSELTMYAMQVQEETSRGIEVYL----LVTALYVVSAL 224 Query: 384 FMNRLNAKIALKEK 397 +NR+ A I + + Sbjct: 225 AINRIMAFIEKRSR 238 Score = 37.7 bits (86), Expect = 3.4, Method: Compositional matrix adjust. Identities = 26/90 (28%), Positives = 44/90 (48%), Gaps = 5/90 (5%) Query: 71 EIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICR 130 E+ Q D +Y +L + T ++ + A ++G+L+G R + W+ R Sbjct: 16 EVAQSCFGKGGDITYLDWLLSAWGWTVSVSLLALAIALVVGSLIGTLRTLPDS--PWVVR 73 Query: 131 V---YVEVFRNIPPLVVIFFLYKSVLSVLP 157 + +VE FRNIP LV IF Y + ++ P Sbjct: 74 LGNAWVEFFRNIPLLVHIFLWYHVIPAIFP 103 >gi|323170778|gb|EFZ56428.1| amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Escherichia coli LT-68] Length = 246 Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 49/129 (37%), Positives = 80/129 (62%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+S + L +TAA + E VR+ + ++PRGQ AA+A+GLT +A R VLLP A R I+P Sbjct: 111 FLSSMLCLGLFTAARVCEQVRAAIQSLPRGQKNAALAMGLTLPQAYRYVLLPNAYRVIVP 170 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 P+TS+ +NL+KNS++A +G D+ + G +++ + A E Y+ ++ +I L M Sbjct: 171 PMTSEMMNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAWESFTAITLAYVLINAVIMLVM 230 Query: 386 NRLNAKIAL 394 + K+ L Sbjct: 231 TLVERKVRL 239 Score = 40.4 bits (93), Expect = 0.51, Method: Compositional matrix adjust. Identities = 24/77 (31%), Positives = 41/77 (53%) Query: 81 SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140 +++Y I GF T L+ I A ++G+ G R N+ ++ + +YVE+FRN+P Sbjct: 17 GNTTYLGWIWSGFQVTIALSICAWIIAFLVGSFFGILRTVPNRFLSGLGTLYVELFRNVP 76 Query: 141 PLVVIFFLYKSVLSVLP 157 +V F Y + +LP Sbjct: 77 LIVQFFTWYLVIPELLP 93 >gi|46202161|ref|ZP_00208410.1| COG0834: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Magnetospirillum magnetotacticum MS-1] Length = 542 Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 53/134 (39%), Positives = 83/134 (61%), Gaps = 7/134 (5%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 EF+ ++ L +T++ +AE VR+G+ + PRGQ AA+ALGLT + R V LP A+R +I Sbjct: 405 EFVIAFLCLGLFTSSRVAEQVRAGIESRPRGQRMAALALGLTETQVFRHVTLPVALRVVI 464 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 PPLTS+++N+ KNSS+A A+G A+L V + ++ Q IE + +Y + A Sbjct: 465 PPLTSEFMNVFKNSSVAFAIGMAELTFVARQMQEESEQGIETLAAVTLLYF----LCAFL 520 Query: 385 MNRLNAKIALKEKK 398 NR +AL E++ Sbjct: 521 ANR---GMALMERR 531 Score = 46.2 bits (108), Expect = 0.009, Method: Compositional matrix adjust. Identities = 38/126 (30%), Positives = 63/126 (50%), Gaps = 18/126 (14%) Query: 66 ERAGFEIDQGI----VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSA 121 E +G+ + GI VP +++ Y + +L V T ++ S A ++G + GA R Sbjct: 296 ETSGYRWNWGIYFEPVPSGTET-YLSWLLWALVWTLAISLSAWALALVLGVVAGALRTVP 354 Query: 122 NKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLP----------IPDHSIVLPF---G 168 ++ VA + YVE+FRNIP LV +F + V +LP +P V+ F G Sbjct: 355 DRRVAGLATAYVELFRNIPLLVQMFLWFFVVPELLPSSWALWVKQEMPAKEFVIAFLCLG 414 Query: 169 MFLNNR 174 +F ++R Sbjct: 415 LFTSSR 420 >gi|319761414|ref|YP_004125351.1| polar amino acid abc transporter, inner membrane subunit [Alicycliphilus denitrificans BC] gi|317115975|gb|ADU98463.1| polar amino acid ABC transporter, inner membrane subunit [Alicycliphilus denitrificans BC] Length = 250 Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 56/134 (41%), Positives = 83/134 (61%), Gaps = 4/134 (2%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P F+ + AL +T+A IAE VRSG+ A+PRGQ A +A+G T + R VLLP A R I Sbjct: 109 PGFVLVVFALGFFTSARIAEQVRSGIQALPRGQRYAGMAMGFTTVQYYRYVLLPMAFRII 168 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 IPPLTS+ +N+ KNSS+A AV ++L + +T + IE+ L + +L ++ AL Sbjct: 169 IPPLTSETMNIFKNSSVAFAVSVSELTMYAMQVQEETSRGIEVYL----LVTALYVVSAL 224 Query: 384 FMNRLNAKIALKEK 397 +NR+ A I + + Sbjct: 225 AINRIMAFIEKRSR 238 Score = 37.7 bits (86), Expect = 2.9, Method: Compositional matrix adjust. Identities = 26/90 (28%), Positives = 44/90 (48%), Gaps = 5/90 (5%) Query: 71 EIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICR 130 E+ Q D +Y +L + T ++ + A ++G+L+G R + W+ R Sbjct: 16 EVTQSCFGKGGDITYLDWLLSAWGWTVSVSLLALAIALVVGSLIGTLRTLPDS--PWVVR 73 Query: 131 V---YVEVFRNIPPLVVIFFLYKSVLSVLP 157 + +VE FRNIP LV IF Y + ++ P Sbjct: 74 LGNAWVEFFRNIPLLVHIFLWYHVIPAIFP 103 >gi|221197900|ref|ZP_03570946.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia multivorans CGD2M] gi|221204542|ref|ZP_03577559.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia multivorans CGD2] gi|221175399|gb|EEE07829.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia multivorans CGD2] gi|221181832|gb|EEE14233.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia multivorans CGD2M] Length = 251 Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 48/96 (50%), Positives = 67/96 (69%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 EF++ ++ LS YTAAF+AE +GL V R Q +AA ALGLT ++ R V+LPQA+R + Sbjct: 117 EFVAGWVGLSAYTAAFVAEECEAGLRGVRRAQHDAAAALGLTPLQSLRYVVLPQAVRIAL 176 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 PPL QY+NL+KNSSLA+A+G A+L + +T Sbjct: 177 PPLFGQYMNLVKNSSLAMAIGVAELSYASRQVETET 212 >gi|134298596|ref|YP_001112092.1| polar amino acid ABC transporter, inner membrane subunit [Desulfotomaculum reducens MI-1] gi|134051296|gb|ABO49267.1| amino acid ABC transporter membrane protein, PAAT family [Desulfotomaculum reducens MI-1] Length = 221 Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 73/219 (33%), Positives = 117/219 (53%), Gaps = 16/219 (7%) Query: 177 SFPTLTMDTNAKIFVFSFVL--GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234 +FP L M I + S + G ++ LF L + K K + YI F G P Sbjct: 10 AFPILMMGLKLTIQLTSLAVFFGCIIGLFVG-LGKMSRIKLIKIPAITYIEFFR--GSPL 66 Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294 LV + L Y F P I G V F S LS + A+ AEI R+G+ ++ + Sbjct: 67 LVQLFLIY---FGLPQ------ILGHPVD-RFWSAVAVLSLNSGAYCAEIFRAGIQSIEK 116 Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354 GQMEAA +LG+TH +A R V+LPQA + +IPPL ++++ ++K++SL +G A+L G Sbjct: 117 GQMEAARSLGMTHIQAMRYVILPQAFKRVIPPLGNEFIAMMKDTSLVSVIGMAELARSGQ 176 Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIA-LFMNRLNAKI 392 I+ T +A +I + Y+ +++ I+ F+NR+ ++ Sbjct: 177 LYISTTYKAFQIWFLVAIFYIVMTLFISEFFVNRMERRL 215 >gi|313680182|ref|YP_004057921.1| polar amino acid ABC transporter, inner membrane subunit [Oceanithermus profundus DSM 14977] gi|313152897|gb|ADR36748.1| polar amino acid ABC transporter, inner membrane subunit [Oceanithermus profundus DSM 14977] Length = 371 Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 73/226 (32%), Positives = 119/226 (52%), Gaps = 21/226 (9%) Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234 G SF TL + A VF+F LG++L+L R +AL +LYI LI G+P Sbjct: 164 GFSF-TLMLTVLAS--VFAFPLGLLLAL-----GRTGKWPVFRALSILYIE--LIRGVPL 213 Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294 + ++ L Y + P+ F+ S P S+ + S + AA++AE VR G+ VP+ Sbjct: 214 ITVLFLSYYM---VPL-----FLPASWEVPTLFSIVVGFSMFAAAYLAEYVRGGIQGVPK 265 Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354 GQ EAA ALGL+ ++ R ++LPQA+RS+IP L Q + + K++SL +G DL+ + Sbjct: 266 GQYEAAWALGLSGTQSARYIILPQAIRSVIPALIGQLIAIFKDTSLVYILGLFDLLFMAI 325 Query: 355 TIINQT---GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 T+ G E++L +Y + +++ +L + L + Sbjct: 326 TVARNPKFLGTEREVLLFIALVYFVGAALMSYASRKLERAMGLGTR 371 >gi|293397297|ref|ZP_06641569.1| glutamate/aspartate ABC superfamily ATP binding cassette transporter, membrane protein [Serratia odorifera DSM 4582] gi|291420215|gb|EFE93472.1| glutamate/aspartate ABC superfamily ATP binding cassette transporter, membrane protein [Serratia odorifera DSM 4582] Length = 292 Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 49/129 (37%), Positives = 78/129 (60%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+S I L +TAA + E VR+ + ++PRGQ A +A+GLT + R VLLP A R I+P Sbjct: 157 FVSSTICLGLFTAARVCEQVRAAIQSLPRGQQAAGLAMGLTLPQTYRYVLLPNAYRVIVP 216 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 P+TS+ LNL+KNS++A +G D+ + G +++ + A E Y+ ++ +I L M Sbjct: 217 PMTSEMLNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAYESFTAITLAYIGINAVIMLVM 276 Query: 386 NRLNAKIAL 394 + K+ L Sbjct: 277 RVVERKVQL 285 Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust. Identities = 43/130 (33%), Positives = 60/130 (46%), Gaps = 19/130 (14%) Query: 82 DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141 +++Y I GF T L+ I A +G+L G R N+ +A I YVE+FRN+ P Sbjct: 64 NTTYLGWIWSGFQVTIALSVCAWIIAFFVGSLFGILRTVPNRFLAAIGTAYVELFRNV-P 122 Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201 L+V FF + V+ L PD GM+ +D N + FV S I L Sbjct: 123 LIVQFFTWYLVIPELLPPD------IGMWFKAE--------LDPNVQFFVSS---TICLG 165 Query: 202 LF-ATRLSRH 210 LF A R+ Sbjct: 166 LFTAARVCEQ 175 >gi|22125091|ref|NP_668514.1| glutamate/aspartate ABC transport system inner membrane permease [Yersinia pestis KIM 10] gi|45440929|ref|NP_992468.1| putative glutamate/aspartate transport system permease [Yersinia pestis biovar Microtus str. 91001] gi|21957946|gb|AAM84765.1|AE013722_4 glutamate/aspartate ABC transport system inner membrane permease [Yersinia pestis KIM 10] gi|45435788|gb|AAS61345.1| putative glutamate/aspartate transport system permease [Yersinia pestis biovar Microtus str. 91001] Length = 263 Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 50/129 (38%), Positives = 79/129 (61%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+S I L +TAA + E VR+G+ ++PRGQ A +A+GLT + R VLLP A R IIP Sbjct: 128 FLSSMICLGLFTAARVCEQVRAGIQSLPRGQKAAGLAMGLTLTQTYRYVLLPNAYRVIIP 187 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 P+TS+ LNL+KNS++A +G ++ + G +++ + A E Y+ ++ +I L M Sbjct: 188 PMTSEMLNLVKNSAIASTIGLVEMAAQAGKLLDYSAHAYESFTAITLGYVLINAVIMLLM 247 Query: 386 NRLNAKIAL 394 + K+ L Sbjct: 248 RLVEKKVQL 256 Score = 43.5 bits (101), Expect = 0.064, Method: Compositional matrix adjust. Identities = 26/78 (33%), Positives = 42/78 (53%) Query: 81 SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140 +++Y I GF T L+ + A +G+L G R N++++ I YVE+FRN+P Sbjct: 34 GNTTYLGWIWSGFQVTVALSLCAWVIAFFVGSLFGILRTVPNRILSGIGACYVELFRNVP 93 Query: 141 PLVVIFFLYKSVLSVLPI 158 +V F Y V +LP+ Sbjct: 94 LIVQFFTWYLVVPELLPV 111 >gi|82543097|ref|YP_407044.1| glutamate-aspartate transport system permease [Shigella boydii Sb227] gi|187733686|ref|YP_001879337.1| glutamate/aspartate ABC transporter permease GltJ [Shigella boydii CDC 3083-94] gi|81244508|gb|ABB65216.1| glutamate-aspartate transport system permease [Shigella boydii Sb227] gi|187430678|gb|ACD09952.1| glutamate/aspartate ABC transporter, permease protein GltJ [Shigella boydii CDC 3083-94] gi|320185367|gb|EFW60137.1| Glutamate Aspartate transport system permease protein GltJ [Shigella flexneri CDC 796-83] gi|332097750|gb|EGJ02724.1| amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Shigella boydii 3594-74] Length = 246 Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 49/129 (37%), Positives = 80/129 (62%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+S + L +TAA + E VR+ + ++PRGQ AA+A+GLT +A R VLLP A R I+P Sbjct: 111 FLSSMLCLGLFTAARVCEQVRAAIQSLPRGQKNAALAMGLTLPQAYRYVLLPNAYRVIVP 170 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 P+TS+ +NL+KNS++A +G D+ + G +++ + A E Y+ ++ +I L M Sbjct: 171 PMTSEMMNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAWESFTAITLAYVLINAIIMLVM 230 Query: 386 NRLNAKIAL 394 + K+ L Sbjct: 231 TLVERKVRL 239 Score = 40.4 bits (93), Expect = 0.53, Method: Compositional matrix adjust. Identities = 24/77 (31%), Positives = 41/77 (53%) Query: 81 SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140 +++Y I GF T L+ I A ++G+ G R N+ ++ + +YVE+FRN+P Sbjct: 17 GNTTYLGWIWSGFQVTIALSICAWIIAFLVGSFFGILRTVPNRFLSGLGTLYVELFRNVP 76 Query: 141 PLVVIFFLYKSVLSVLP 157 +V F Y + +LP Sbjct: 77 LIVQFFTWYLVIPELLP 93 >gi|242280828|ref|YP_002992957.1| polar amino acid ABC transporter inner membrane subunit [Desulfovibrio salexigens DSM 2638] gi|242123722|gb|ACS81418.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio salexigens DSM 2638] Length = 593 Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 51/130 (39%), Positives = 81/130 (62%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 E +S + L YT++F+AE++R+G+ ++P+G +EAA + GLT + ++LP A R+II Sbjct: 138 EMLSATVGLGIYTSSFMAEVIRAGIQSIPKGLLEAAYSSGLTPFQTLTKIILPLAFRAII 197 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 PPL S++LN +KNSSLA+ VG ++ I T + E IYLSLS+ IA Sbjct: 198 PPLGSEFLNNMKNSSLAMVVGVPEICWASQQIEGMTFKGFEATTAATVIYLSLSLTIAGI 257 Query: 385 MNRLNAKIAL 394 + +N K+ + Sbjct: 258 LTLVNWKLQI 267 Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 67/205 (32%), Positives = 115/205 (56%), Gaps = 20/205 (9%) Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL- 251 SF +G+++ + T ++ F + LYI LI G P +++I + ++F P+L Sbjct: 401 SFFIGLIVGIGRTSKNKLFLIPS-----TLYIE--LIRGNPLIMVI---FWIYFFIPILT 450 Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311 GQF + F S IAL+ +T A++AEIVRSG+ +P GQ EAA++ GLT+ +A Sbjct: 451 GQFLNV--------FWSATIALTVFTGAYLAEIVRSGIQNLPPGQFEAAVSTGLTYWQAM 502 Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG-QAIEIILIW 370 R V+LPQA++ ++P + Q++ + K++SLA +G +L V + N+ EI Sbjct: 503 RKVILPQALKQMLPAIVGQFIAIFKDTSLAFVIGVLELTFVAQGLNNRLMIYPFEIYTTV 562 Query: 371 MFIYLSLSIMIALFMNRLNAKIALK 395 F+Y +++L RL K++ + Sbjct: 563 AFLYFICCYLMSLVARRLERKLSTE 587 >gi|320530119|ref|ZP_08031189.1| putative glutamine ABC transporter permease protein [Selenomonas artemidis F0399] gi|320137552|gb|EFW29464.1| putative glutamine ABC transporter permease protein [Selenomonas artemidis F0399] Length = 219 Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 72/217 (33%), Positives = 117/217 (53%), Gaps = 15/217 (6%) Query: 177 SFPTLTMDTNA--KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234 SFP L + +I V S +G ++ L ++R K + L +Y+ F G P Sbjct: 11 SFPLLLVGAGVTIQITVLSTTIGFIVGLIVA-VARISKLKLLRILAEVYVEFFR--GTPL 67 Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294 LV I L Y F PV I G + P F++ A + A++AEI R+G+ +V Sbjct: 68 LVQIFLFY---FALPV------ITGQRIDP-FIAAISACGINSGAYVAEIFRAGIQSVDA 117 Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354 GQMEA +LG+T + R +++PQA + +IPPL ++++ +LK+SSL +GF +L G Sbjct: 118 GQMEAGRSLGMTWIQTMRYIIVPQAFKRVIPPLGNEFIAMLKDSSLVSVIGFEELTRRGQ 177 Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 II +T ++EI L IYL++++ I+ + L + Sbjct: 178 LIIAKTYGSMEIWLSVAVIYLAMTLTISRLVAYLERR 214 Score = 37.7 bits (86), Expect = 3.0, Method: Compositional matrix adjust. Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 4/59 (6%) Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPF 167 I+G +V R+S KL+ + VYVE FR P LV IF Y + LP+ + PF Sbjct: 35 IVGLIVAVARISKLKLLRILAEVYVEFFRGTPLLVQIFLFYFA----LPVITGQRIDPF 89 >gi|332160867|ref|YP_004297444.1| putative glutamate/aspartate transport system permease [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|318604770|emb|CBY26268.1| glutamate Aspartate transport system permease protein GltJ [Yersinia enterocolitica subsp. palearctica Y11] gi|325665097|gb|ADZ41741.1| putative glutamate/aspartate transport system permease [Yersinia enterocolitica subsp. palearctica 105.5R(r)] Length = 246 Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 50/129 (38%), Positives = 79/129 (61%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+S + L +TAA + E VR+G+ ++PRGQ A +A+GLT + R VLLP A R IIP Sbjct: 111 FLSSMMCLGLFTAARVCEQVRAGIQSLPRGQKAAGLAMGLTLPQTYRYVLLPNAYRVIIP 170 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 P+TS+ LNL+KNS++A +G D+ + G +++ + A E Y+ ++ +I L M Sbjct: 171 PMTSEMLNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAYESFTAITLGYVLINAVIMLLM 230 Query: 386 NRLNAKIAL 394 + K+ L Sbjct: 231 RIVEKKVQL 239 Score = 42.0 bits (97), Expect = 0.19, Method: Compositional matrix adjust. Identities = 26/77 (33%), Positives = 41/77 (53%) Query: 81 SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140 +++Y I GF T L+ + A +G+L G R N++++ I YVE+FRN+P Sbjct: 17 GNTTYLGWIWSGFQVTVALSLCAWVIAFFVGSLFGILRTVPNRILSSIGACYVELFRNVP 76 Query: 141 PLVVIFFLYKSVLSVLP 157 +V F Y V +LP Sbjct: 77 LIVQFFTWYLVVPELLP 93 >gi|260597071|ref|YP_003209642.1| glutamate/aspartate transport system permease gltJ [Cronobacter turicensis z3032] gi|260216248|emb|CBA29165.1| Glutamate/aspartate transport system permease protein gltJ [Cronobacter turicensis z3032] Length = 246 Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 48/129 (37%), Positives = 79/129 (61%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+S I L +TAA + E VR+ + ++PRGQ A +A+GLT + R VLLP A R I+P Sbjct: 111 FLSSMICLGLFTAARVCEQVRAAIQSLPRGQKNAGLAMGLTLPQTYRYVLLPNAYRVIVP 170 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 P+TS+ +NL+KNS++A +G D+ + G +++ + A E Y+ ++ +I + M Sbjct: 171 PMTSEMMNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAWESFTAITLAYVFINTVIMVVM 230 Query: 386 NRLNAKIAL 394 N + K+ L Sbjct: 231 NLVERKVRL 239 Score = 42.4 bits (98), Expect = 0.14, Method: Compositional matrix adjust. Identities = 38/130 (29%), Positives = 60/130 (46%), Gaps = 19/130 (14%) Query: 82 DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141 +++Y + GF T L+ S I A ++G+L G R N+ ++ + YVE+FRN+P Sbjct: 18 NTTYLGWLWSGFQVTVALSISAWIIAFLVGSLFGILRTVPNRFLSALGTCYVELFRNVPL 77 Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201 +V F Y V +LP + G+ F +D N + F+ S I L Sbjct: 78 IVQFFTWYLVVPELLP--------------EDLGMWFKA-ELDPNVQFFLSSM---ICLG 119 Query: 202 LF-ATRLSRH 210 LF A R+ Sbjct: 120 LFTAARVCEQ 129 >gi|145589172|ref|YP_001155769.1| polar amino acid ABC transporter, inner membrane subunit [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|145047578|gb|ABP34205.1| amino acid ABC transporter membrane protein 1, PAAT family [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 260 Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 55/135 (40%), Positives = 84/135 (62%), Gaps = 7/135 (5%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P ++ + +AL +T+A IAE VR+G+ ++P GQ AA ALGL ++ R V+LP A+R + Sbjct: 117 PSYLLVSLALGFFTSARIAEQVRAGIQSLPSGQRAAATALGLNTFQSYRYVILPMALRIV 176 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 IPPLTS+ +NL+KNSS+A AV +L +T +E IYL+++I+ AL Sbjct: 177 IPPLTSESMNLIKNSSVAFAVSVPELTLFAMQAQEETSHGVE-------IYLAVTILYAL 229 Query: 384 FMNRLNAKIALKEKK 398 +N +AL EK+ Sbjct: 230 SAFAINRAMALIEKR 244 >gi|74311190|ref|YP_309609.1| glutamate/aspartate transport system permease [Shigella sonnei Ss046] gi|170681365|ref|YP_001742771.1| glutamate/aspartate ABC transporter permease GltJ [Escherichia coli SMS-3-5] gi|193063371|ref|ZP_03044461.1| glutamate/aspartate ABC transporter, permease protein GltJ [Escherichia coli E22] gi|193069039|ref|ZP_03049997.1| glutamate/aspartate ABC transporter, permease protein GltJ [Escherichia coli E110019] gi|194429737|ref|ZP_03062253.1| glutamate/aspartate ABC transporter, permease protein GltJ [Escherichia coli B171] gi|218553196|ref|YP_002386109.1| glutamate and aspartate ABC transporter membrane protein [Escherichia coli IAI1] gi|218694094|ref|YP_002401761.1| glutamate and aspartate transporter subunit ; membrane component of ABC superfamily [Escherichia coli 55989] gi|256020606|ref|ZP_05434471.1| glutamate and aspartate transporter subunit ; membrane component of ABC superfamily protein [Shigella sp. D9] gi|260842880|ref|YP_003220658.1| glutamate/aspartate transport system permease GltJ [Escherichia coli O103:H2 str. 12009] gi|260853905|ref|YP_003227796.1| glutamate/aspartate transport system permease GltJ [Escherichia coli O26:H11 str. 11368] gi|260866802|ref|YP_003233204.1| glutamate/aspartate transport system permease GltJ [Escherichia coli O111:H- str. 11128] gi|293413950|ref|ZP_06656599.1| glutamate/aspartate transport system permease gltJ [Escherichia coli B185] gi|293418766|ref|ZP_06661201.1| glutamate/aspartate transport system permease gltJ [Escherichia coli B088] gi|300817826|ref|ZP_07098040.1| ABC transporter, permease protein [Escherichia coli MS 107-1] gi|300823029|ref|ZP_07103163.1| ABC transporter, permease protein [Escherichia coli MS 119-7] gi|307312630|ref|ZP_07592262.1| polar amino acid ABC transporter, inner membrane subunit [Escherichia coli W] gi|331667008|ref|ZP_08367882.1| glutamate/aspartate transport system permease protein GltJ [Escherichia coli TA271] gi|331676314|ref|ZP_08377026.1| glutamate/aspartate transport system permease protein GltJ [Escherichia coli H591] gi|73854667|gb|AAZ87374.1| glutamate/aspartate transport system permease [Shigella sonnei Ss046] gi|170519083|gb|ACB17261.1| glutamate/aspartate ABC transporter, permease protein GltJ [Escherichia coli SMS-3-5] gi|192930955|gb|EDV83559.1| glutamate/aspartate ABC transporter, permease protein GltJ [Escherichia coli E22] gi|192957583|gb|EDV88028.1| glutamate/aspartate ABC transporter, permease protein GltJ [Escherichia coli E110019] gi|194412218|gb|EDX28524.1| glutamate/aspartate ABC transporter, permease protein GltJ [Escherichia coli B171] gi|218350826|emb|CAU96520.1| glutamate and aspartate transporter subunit ; membrane component of ABC superfamily [Escherichia coli 55989] gi|218359964|emb|CAQ97508.1| glutamate and aspartate transporter subunit ; membrane component of ABC superfamily [Escherichia coli IAI1] gi|257752554|dbj|BAI24056.1| glutamate/aspartate transport system permease GltJ [Escherichia coli O26:H11 str. 11368] gi|257758027|dbj|BAI29524.1| glutamate/aspartate transport system permease GltJ [Escherichia coli O103:H2 str. 12009] gi|257763158|dbj|BAI34653.1| glutamate/aspartate transport system permease GltJ [Escherichia coli O111:H- str. 11128] gi|291325294|gb|EFE64709.1| glutamate/aspartate transport system permease gltJ [Escherichia coli B088] gi|291434008|gb|EFF06981.1| glutamate/aspartate transport system permease gltJ [Escherichia coli B185] gi|300524378|gb|EFK45447.1| ABC transporter, permease protein [Escherichia coli MS 119-7] gi|300529523|gb|EFK50585.1| ABC transporter, permease protein [Escherichia coli MS 107-1] gi|306907332|gb|EFN37837.1| polar amino acid ABC transporter, inner membrane subunit [Escherichia coli W] gi|315059909|gb|ADT74236.1| glutamate and aspartate transporter subunit [Escherichia coli W] gi|320198221|gb|EFW72825.1| Glutamate Aspartate transport system permease protein GltJ [Escherichia coli EC4100B] gi|323153621|gb|EFZ39869.1| amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Escherichia coli EPECa14] gi|323158892|gb|EFZ44903.1| amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Escherichia coli E128010] gi|323179869|gb|EFZ65426.1| amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Escherichia coli 1180] gi|323184991|gb|EFZ70358.1| amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Escherichia coli 1357] gi|323379527|gb|ADX51795.1| polar amino acid ABC transporter, inner membrane subunit [Escherichia coli KO11] gi|323945129|gb|EGB41191.1| inner membrane transport system [Escherichia coli H120] gi|324116728|gb|EGC10643.1| inner membrane transport system [Escherichia coli E1167] gi|331066232|gb|EGI38116.1| glutamate/aspartate transport system permease protein GltJ [Escherichia coli TA271] gi|331076372|gb|EGI47654.1| glutamate/aspartate transport system permease protein GltJ [Escherichia coli H591] gi|332104147|gb|EGJ07493.1| glutamate/aspartate transport system permease [Shigella sp. D9] Length = 246 Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 49/129 (37%), Positives = 80/129 (62%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+S + L +TAA + E VR+ + ++PRGQ AA+A+GLT +A R VLLP A R I+P Sbjct: 111 FLSSMLCLGLFTAARVCEQVRAAIQSLPRGQKNAALAMGLTLPQAYRYVLLPNAYRVIVP 170 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 P+TS+ +NL+KNS++A +G D+ + G +++ + A E Y+ ++ +I L M Sbjct: 171 PMTSEMMNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAWESFTAITLAYVLINAVIMLVM 230 Query: 386 NRLNAKIAL 394 + K+ L Sbjct: 231 TLVERKVRL 239 Score = 40.4 bits (93), Expect = 0.54, Method: Compositional matrix adjust. Identities = 24/77 (31%), Positives = 41/77 (53%) Query: 81 SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140 +++Y I GF T L+ I A ++G+ G R N+ ++ + +YVE+FRN+P Sbjct: 17 GNTTYLGWIWSGFQVTIALSICAWIIAFLVGSFFGILRTVPNRFLSGLGTLYVELFRNVP 76 Query: 141 PLVVIFFLYKSVLSVLP 157 +V F Y + +LP Sbjct: 77 LIVQFFTWYLVIPELLP 93 >gi|253755502|ref|YP_003028642.1| glutamine ABC transporter, glutamine-binding protein/permease protein [Streptococcus suis BM407] gi|251817966|emb|CAZ55746.1| putative glutamine ABC transporter, glutamine-binding protein/permease protein [Streptococcus suis BM407] Length = 732 Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 66/216 (30%), Positives = 116/216 (53%), Gaps = 25/216 (11%) Query: 168 GMFLNNRG--LSFPTLTMDTNAKIFVFSFVLGIVLSLFAT------RLSRHFHEKTGKAL 219 G+ NN G LS +T+ F + V+GI+ +FA R++ + + Sbjct: 516 GLLKNNYGQLLSGLGITIGLALLSFAIAIVIGIIFGMFAVSPVKALRVTSSVFVDVVRGI 575 Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279 PL+ ++ F+ +G+P L+ + + GQ + I +F++ IALS ++A Sbjct: 576 PLMIVAAFIFWGIPNLI-----------ESMTGQQSPIN------DFVAGTIALSLNSSA 618 Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339 +IAEIVR G+ AVP GQMEA+ +LG+++ R ++LPQA + ++P +Q++ LK+++ Sbjct: 619 YIAEIVRGGIQAVPAGQMEASRSLGISYGTTMRKIILPQAGKIMLPNFINQFVITLKDTT 678 Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375 + A+G +L G II + Q+ + I IYL Sbjct: 679 IISAIGLVELFQAGKIIIARNYQSFRMYAILAIIYL 714 >gi|288550054|ref|ZP_05969126.2| glutamate/aspartate ABC transporter, permease protein [Enterobacter cancerogenus ATCC 35316] gi|288316572|gb|EFC55510.1| glutamate/aspartate ABC transporter, permease protein [Enterobacter cancerogenus ATCC 35316] Length = 250 Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 49/126 (38%), Positives = 78/126 (61%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+S + L +TAA + E VR+ + ++PRGQ AA+A+GLT +A R VLLP A R I+P Sbjct: 115 FVSSMLCLGLFTAARVCEQVRAAIQSLPRGQKNAALAMGLTLPQAYRYVLLPNAYRVIVP 174 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 P+TS+ +NL+KNS++A +G D+ + G +++ + A E Y+ ++ I L M Sbjct: 175 PMTSEMMNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAWESFTAITLAYVLINAFIMLVM 234 Query: 386 NRLNAK 391 N + K Sbjct: 235 NLVERK 240 Score = 43.1 bits (100), Expect = 0.085, Method: Compositional matrix adjust. Identities = 38/130 (29%), Positives = 61/130 (46%), Gaps = 19/130 (14%) Query: 82 DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141 +++Y + GF T L+ + I A +IG+L G R N+ ++ + +YVE+FRN+P Sbjct: 22 NTTYLGWLWSGFQVTVALSITAWIIAFLIGSLFGILRTVPNRFLSSLGTLYVELFRNVPL 81 Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201 +V F Y + +LP N G+ F +D N + FV S + L Sbjct: 82 IVQFFTWYLVIPELLP--------------ENIGMWFKA-ELDPNVQFFVSSM---LCLG 123 Query: 202 LF-ATRLSRH 210 LF A R+ Sbjct: 124 LFTAARVCEQ 133 >gi|307130053|ref|YP_003882069.1| membrane protein of an ABC superfamily glutamate/aspartate transporter [Dickeya dadantii 3937] gi|306527582|gb|ADM97512.1| membrane component of an ABC superfamily glutamate/aspartate transporter [Dickeya dadantii 3937] Length = 224 Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 47/127 (37%), Positives = 80/127 (62%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 +S +A S + AA+ +EI+R+G+ ++ RGQ AA+ALG+TH ++ RLV+LPQA R++I Sbjct: 96 RLVSAMVAFSLFEAAYYSEIIRAGIQSISRGQASAALALGMTHWQSMRLVILPQAFRAMI 155 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 P L +Q + L +++SL + AD TI + G +E+IL F+Y +S+ ++ Sbjct: 156 PLLLTQGIVLFQDTSLVYVLSLADFFRTASTIGERDGTQVEMILFAGFVYFVISLSASML 215 Query: 385 MNRLNAK 391 +N L + Sbjct: 216 VNYLKRR 222 Score = 37.0 bits (84), Expect = 5.1, Method: Compositional matrix adjust. Identities = 17/46 (36%), Positives = 31/46 (67%) Query: 111 GTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVL 156 GT++ RLS K ++W ++YV +FR++P ++V+ + Y V S+L Sbjct: 38 GTVLAVMRLSPIKPISWFAKLYVNLFRSVPLVMVLLWFYLIVPSLL 83 >gi|306825135|ref|ZP_07458477.1| amino acid ABC superfamily ATP binding cassette transporter, amino acid-binding protein/permease protein [Streptococcus sp. oral taxon 071 str. 73H25AP] gi|304432571|gb|EFM35545.1| amino acid ABC superfamily ATP binding cassette transporter, amino acid-binding protein/permease protein [Streptococcus sp. oral taxon 071 str. 73H25AP] Length = 721 Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 60/192 (31%), Positives = 105/192 (54%), Gaps = 23/192 (11%) Query: 190 FVFSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243 F + V+GI+ +F+ RL + +PL+ ++ F+ +G+P Sbjct: 529 FAIAIVIGIIFGMFSVSPYKSLRLISEIFVDVIRGIPLMILAAFIFWGIP---------- 578 Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 +F + + GQ + I +F++ IALS AA+IAEIVR G+ AVP GQMEA+ +L Sbjct: 579 -NFIESITGQQSPIN------DFVAGTIALSLNAAAYIAEIVRGGIQAVPVGQMEASRSL 631 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363 G+++ K R ++LPQA + ++P +Q++ LK++++ A+G +L G II + Q+ Sbjct: 632 GISYGKTMRKIILPQATKLMLPNFVNQFVIALKDTTIVSAIGLVELFQTGKIIIARNYQS 691 Query: 364 IEIILIWMFIYL 375 ++ I YL Sbjct: 692 FKMYAILAIFYL 703 >gi|149365485|ref|ZP_01887520.1| putative glutamate/aspartate transport system permease [Yersinia pestis CA88-4125] gi|165925373|ref|ZP_02221205.1| glutamate/aspartate ABC transporter, permease protein GltJ [Yersinia pestis biovar Orientalis str. F1991016] gi|165937693|ref|ZP_02226255.1| glutamate/aspartate ABC transporter, permease protein GltJ [Yersinia pestis biovar Orientalis str. IP275] gi|167422564|ref|ZP_02314317.1| glutamate/aspartate ABC transporter, permease protein GltJ [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167468411|ref|ZP_02333115.1| putative glutamate/aspartate transport system permease [Yersinia pestis FV-1] gi|218929695|ref|YP_002347570.1| putative glutamate/aspartate transport system permease [Yersinia pestis CO92] gi|229838161|ref|ZP_04458320.1| glutamate and aspartate transporter subunit, membrane component of ABC superfamily [Yersinia pestis biovar Orientalis str. PEXU2] gi|229898728|ref|ZP_04513873.1| glutamate and aspartate transporter subunit, membrane component of ABC superfamily [Yersinia pestis biovar Orientalis str. India 195] gi|115348306|emb|CAL21237.1| putative glutamate/aspartate transport system permease [Yersinia pestis CO92] gi|149291898|gb|EDM41972.1| putative glutamate/aspartate transport system permease [Yersinia pestis CA88-4125] gi|165914443|gb|EDR33058.1| glutamate/aspartate ABC transporter, permease protein GltJ [Yersinia pestis biovar Orientalis str. IP275] gi|165922980|gb|EDR40131.1| glutamate/aspartate ABC transporter, permease protein GltJ [Yersinia pestis biovar Orientalis str. F1991016] gi|166958578|gb|EDR55599.1| glutamate/aspartate ABC transporter, permease protein GltJ [Yersinia pestis biovar Orientalis str. MG05-1020] gi|229688276|gb|EEO80347.1| glutamate and aspartate transporter subunit, membrane component of ABC superfamily [Yersinia pestis biovar Orientalis str. India 195] gi|229694527|gb|EEO84574.1| glutamate and aspartate transporter subunit, membrane component of ABC superfamily [Yersinia pestis biovar Orientalis str. PEXU2] Length = 246 Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 50/129 (38%), Positives = 79/129 (61%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+S I L +TAA + E VR+G+ ++PRGQ A +A+GLT + R VLLP A R IIP Sbjct: 111 FLSSMICLGLFTAARVCEQVRAGIQSLPRGQKAAGLAMGLTLTQTYRYVLLPNAYRVIIP 170 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 P+TS+ LNL+KNS++A +G ++ + G +++ + A E Y+ ++ +I L M Sbjct: 171 PMTSEMLNLVKNSAIASTIGLVEMAAQAGKLLDYSAHAYESFTAITLGYVLINAVIMLLM 230 Query: 386 NRLNAKIAL 394 + K+ L Sbjct: 231 RLVEKKVQL 239 Score = 40.8 bits (94), Expect = 0.36, Method: Compositional matrix adjust. Identities = 25/78 (32%), Positives = 41/78 (52%) Query: 81 SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140 +++Y I GF T L+ + A +G+L G R N++++ I YVE+FRN+P Sbjct: 17 GNTTYLGWIWSGFQVTVALSLCAWVIAFFVGSLFGILRTVPNRILSGIGACYVELFRNVP 76 Query: 141 PLVVIFFLYKSVLSVLPI 158 +V Y V +LP+ Sbjct: 77 LIVQFLTWYLVVPELLPV 94 >gi|300901165|ref|ZP_07119270.1| putative ATP synthase F0, A subunit [Escherichia coli MS 198-1] gi|300959228|ref|ZP_07171304.1| putative ATP synthase F0, A subunit [Escherichia coli MS 175-1] gi|300314173|gb|EFJ63957.1| putative ATP synthase F0, A subunit [Escherichia coli MS 175-1] gi|300355404|gb|EFJ71274.1| putative ATP synthase F0, A subunit [Escherichia coli MS 198-1] Length = 255 Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 49/129 (37%), Positives = 79/129 (61%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+S + L +TAA + E VR+ + ++PRGQ AA+A+GLT +A R VLLP A R I+P Sbjct: 120 FLSSMLCLGLFTAARVCEQVRAAIQSLPRGQKNAALAMGLTLPQAYRYVLLPNAYRVIVP 179 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 P+TS+ +NL+KNS++A +G D+ + G +++ + A E Y+ ++ I L M Sbjct: 180 PMTSEMMNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAWESFTAITLAYVLINAFIMLVM 239 Query: 386 NRLNAKIAL 394 + K+ L Sbjct: 240 TLVERKVRL 248 Score = 40.4 bits (93), Expect = 0.51, Method: Compositional matrix adjust. Identities = 24/77 (31%), Positives = 41/77 (53%) Query: 81 SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140 +++Y I GF T L+ I A ++G+ G R N+ ++ + +YVE+FRN+P Sbjct: 26 GNTTYLGWIWSGFQVTIALSICAWIIAFLVGSFFGILRTVPNRFLSGLGTLYVELFRNVP 85 Query: 141 PLVVIFFLYKSVLSVLP 157 +V F Y + +LP Sbjct: 86 LIVQFFTWYLVIPELLP 102 >gi|312958495|ref|ZP_07773015.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Pseudomonas fluorescens WH6] gi|311287038|gb|EFQ65599.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Pseudomonas fluorescens WH6] Length = 319 Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 68/205 (33%), Positives = 115/205 (56%), Gaps = 17/205 (8%) Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252 S +LG+ + L AT L R T + L +Y+ L+ G P LV I + Y Sbjct: 131 SGILGLAIGL-ATGLCRLSSNPTLRDLSTIYVE--LVRGTPLLVQIFIFY---------- 177 Query: 253 QFNFIGGS-TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311 FIG +S EF + ALS +T A++AEIVR+G+ ++ RGQ EAA +LGL+ ++ Sbjct: 178 --FFIGTVLNLSREFAGI-AALSLFTGAYVAEIVRAGVQSITRGQNEAARSLGLSAGQSM 234 Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371 R V+LPQA + ++PPL Q+++L+K++SL + +L+ G +I + EI+ Sbjct: 235 RHVVLPQAFKRVLPPLAGQFISLVKDTSLVSVIAITELLKSGREVITTSFSPFEILFCVA 294 Query: 372 FIYLSLSIMIALFMNRLNAKIALKE 396 +YL +++ ++ +RL ++A + Sbjct: 295 GLYLLINLPLSKMASRLERRLAQSD 319 Score = 37.4 bits (85), Expect = 4.4, Method: Compositional matrix adjust. Identities = 22/61 (36%), Positives = 30/61 (49%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 ++ G T WL+ I IG G RLS+N + + +YVE+ R P LV IF Sbjct: 117 LMWGLWTTLWLSAVSGILGLAIGLATGLCRLSSNPTLRDLSTIYVELVRGTPLLVQIFIF 176 Query: 149 Y 149 Y Sbjct: 177 Y 177 >gi|227327383|ref|ZP_03831407.1| glutamate/aspartate transport system permease protein [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 224 Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 47/127 (37%), Positives = 80/127 (62%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 +S +A S + AA+ +EI+R+G+++V RGQ AA+ALG+TH ++ +LV+LPQA R+++ Sbjct: 96 RLISAMVAFSLFEAAYYSEIIRAGILSVSRGQSSAALALGMTHWQSMKLVILPQAFRAMV 155 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 P L +Q + L +++SL + AD TI + G +E+IL FIY SI ++ Sbjct: 156 PLLLTQGIVLFQDTSLVYVLSLADFFRTASTIGERDGTQVEMILFAGFIYFLFSITASML 215 Query: 385 MNRLNAK 391 ++ L + Sbjct: 216 VSYLKKR 222 Score = 40.0 bits (92), Expect = 0.63, Method: Compositional matrix adjust. Identities = 20/65 (30%), Positives = 39/65 (60%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151 G V T + + ++ + GT++ RLS K ++W ++YV +FR++P ++V+ + Y Sbjct: 19 GMVVTLKITLTAVVFGIVWGTILAVMRLSPIKPISWFAKLYVNLFRSVPLVMVLLWFYLV 78 Query: 152 VLSVL 156 V S+L Sbjct: 79 VPSLL 83 >gi|39998494|ref|NP_954445.1| amino acid ABC transporter permease [Geobacter sulfurreducens PCA] gi|39985441|gb|AAR36795.1| amino acid ABC transporter, permease protein [Geobacter sulfurreducens PCA] gi|298507439|gb|ADI86162.1| amino acid ABC transporter, membrane protein [Geobacter sulfurreducens KN400] Length = 263 Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 65/207 (31%), Positives = 117/207 (56%), Gaps = 19/207 (9%) Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247 ++ V + +L +V+ L A L R + + LY+ +I G+P LV QL + Sbjct: 70 QVTVGAILLALVIGLVAG-LGRISSNRIINGIASLYVE--IIRGIPLLV------QLFYI 120 Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307 LG+F + P+ S IA++ A++ E++R+G+ ++P+GQMEAA +LG+T Sbjct: 121 YYALGRFVHV------PDMASAIIAMAVCYGAYMGEVIRAGIQSIPKGQMEAARSLGMTK 174 Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE-- 365 +A R V+LPQA + ++PP+ ++++ LLK+SSL + AD++ G +++ E Sbjct: 175 GQAMRHVILPQAAKVVLPPIGNEFIALLKDSSLVSILAVADILRRGREFASESFTYFETY 234 Query: 366 --IILIWMFIYLSLSIMIALFMNRLNA 390 I L+++ I L LS +I + R++A Sbjct: 235 TVIALVYLIITLFLSKLIGIMEERISA 261 Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 24/71 (33%), Positives = 45/71 (63%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151 G + TF + ++ A +IG + G GR+S+N+++ I +YVE+ R IP LV +F++Y + Sbjct: 64 GILVTFQVTVGAILLALVIGLVAGLGRISSNRIINGIASLYVEIIRGIPLLVQLFYIYYA 123 Query: 152 VLSVLPIPDHS 162 + + +PD + Sbjct: 124 LGRFVHVPDMA 134 >gi|238786078|ref|ZP_04630036.1| Glutamate/aspartate transport system permease protein gltJ [Yersinia bercovieri ATCC 43970] gi|238795398|ref|ZP_04638913.1| Glutamate/aspartate transport system permease protein gltJ [Yersinia mollaretii ATCC 43969] gi|238713017|gb|EEQ05071.1| Glutamate/aspartate transport system permease protein gltJ [Yersinia bercovieri ATCC 43970] gi|238720517|gb|EEQ12318.1| Glutamate/aspartate transport system permease protein gltJ [Yersinia mollaretii ATCC 43969] Length = 246 Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 50/129 (38%), Positives = 79/129 (61%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+S I L +TAA + E VR+G+ ++PRGQ A +A+GLT + R VLLP A R IIP Sbjct: 111 FLSSVICLGLFTAARVCEQVRAGIQSLPRGQKAAGLAMGLTLPQTYRYVLLPNAYRVIIP 170 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 P+TS+ +NL+KNS++A +G D+ + G +++ + A E Y+ ++ +I L M Sbjct: 171 PMTSEMVNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAYESFTAITLGYVLINAVIMLVM 230 Query: 386 NRLNAKIAL 394 + K+ L Sbjct: 231 RLVEKKVQL 239 Score = 44.3 bits (103), Expect = 0.033, Method: Compositional matrix adjust. Identities = 39/131 (29%), Positives = 60/131 (45%), Gaps = 19/131 (14%) Query: 81 SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140 +++Y I GF T L+ + A IG+L G R N++++ I YVE+FRN+P Sbjct: 17 GNTTYLGWIWSGFQVTIALSLCAWVIAFFIGSLFGILRTVPNRILSGIGTCYVELFRNVP 76 Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200 +V F Y V +LP+ GM+ + +D N + F+ S I L Sbjct: 77 LIVQFFTWYLVVPELLPV-------DIGMWFKSE--------LDPNIQFFLSSV---ICL 118 Query: 201 SLF-ATRLSRH 210 LF A R+ Sbjct: 119 GLFTAARVCEQ 129 >gi|239817010|ref|YP_002945920.1| polar amino acid ABC transporter inner membrane subunit [Variovorax paradoxus S110] gi|239803587|gb|ACS20654.1| polar amino acid ABC transporter, inner membrane subunit [Variovorax paradoxus S110] Length = 240 Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 61/170 (35%), Positives = 98/170 (57%), Gaps = 11/170 (6%) Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286 F++ GLP L++I Y F V G + +F ++ IAL + AA++AEIVR Sbjct: 66 FVVRGLPLLMVIFWAY--FFLPSVTG--------VKTDQFTTMLIALVVFDAAYLAEIVR 115 Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346 +G+ +PRGQME A ALGL + +A RLV+LPQA+RS++P L +Q+++ +K +SL +G Sbjct: 116 AGIQGLPRGQMETARALGLDYGRAMRLVVLPQALRSMLPSLVNQFVSTIKETSLGYIIGL 175 Query: 347 ADLVSVGGTIINQT-GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395 A++ + I Q + +I LI Y L ++ F L ++A + Sbjct: 176 AEVSFIATQINTQVFTKPAQIYLILGLTYFILCFGLSRFAYWLERRLARR 225 >gi|324016085|gb|EGB85304.1| putative ATP synthase F0, A subunit [Escherichia coli MS 117-3] Length = 255 Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 49/129 (37%), Positives = 79/129 (61%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+S + L +TAA + E VR+ + ++PRGQ AA+A+GLT +A R VLLP A R I+P Sbjct: 120 FLSSMLCLGLFTAARVCEQVRAAIQSLPRGQKNAALAMGLTLPQAYRYVLLPNAYRVIVP 179 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 P+TS+ +NL+KNS++A +G D+ + G +++ + A E Y+ ++ I L M Sbjct: 180 PMTSEMMNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAWESFTAITLAYVLINAFIMLVM 239 Query: 386 NRLNAKIAL 394 + K+ L Sbjct: 240 TLVERKVRL 248 Score = 40.4 bits (93), Expect = 0.55, Method: Compositional matrix adjust. Identities = 24/77 (31%), Positives = 41/77 (53%) Query: 81 SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140 +++Y I GF T L+ I A ++G+ G R N+ ++ + +YVE+FRN+P Sbjct: 26 GNTTYLGWIWSGFQVTIALSICAWIIAFLVGSFFGILRTVPNRFLSGLGTLYVELFRNVP 85 Query: 141 PLVVIFFLYKSVLSVLP 157 +V F Y + +LP Sbjct: 86 LIVQFFTWYLVIPELLP 102 >gi|282848846|ref|ZP_06258236.1| ABC transporter, permease protein [Veillonella parvula ATCC 17745] gi|294791750|ref|ZP_06756898.1| glutamine ABC transporter, permease protein [Veillonella sp. 6_1_27] gi|294793611|ref|ZP_06758748.1| glutamine ABC transporter, permease protein [Veillonella sp. 3_1_44] gi|282581351|gb|EFB86744.1| ABC transporter, permease protein [Veillonella parvula ATCC 17745] gi|294455181|gb|EFG23553.1| glutamine ABC transporter, permease protein [Veillonella sp. 3_1_44] gi|294456980|gb|EFG25342.1| glutamine ABC transporter, permease protein [Veillonella sp. 6_1_27] Length = 218 Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 58/168 (34%), Positives = 99/168 (58%), Gaps = 10/168 (5%) Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287 +I G P LV I L ++F P+ I G + P +++ A S + A+++EI R+ Sbjct: 61 IIRGTPLLVQIFL---IYFALPM------ITGQRIDP-YIAAVTACSINSGAYVSEIFRA 110 Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347 G+ ++ +GQMEA +LGLT + R +++PQA ++IIPPL ++++ +LK+SSL +GF Sbjct: 111 GIQSIDKGQMEAGRSLGLTWGQTMRYIIMPQAFKAIIPPLGNEFIAMLKDSSLVSVIGFE 170 Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395 +L G II +T + EI IYL +++ I+ + L K ++K Sbjct: 171 ELTRRGQLIIAKTYASFEIWGTVAVIYLIMTVTISQLVGYLERKYSIK 218 >gi|259047505|ref|ZP_05737906.1| His/Glu/Gln/Arg/opine family amino acid ABC superfamily ATP binding cassette transporter, permease protein [Granulicatella adiacens ATCC 49175] gi|259035696|gb|EEW36951.1| His/Glu/Gln/Arg/opine family amino acid ABC superfamily ATP binding cassette transporter, permease protein [Granulicatella adiacens ATCC 49175] Length = 213 Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 69/207 (33%), Positives = 113/207 (54%), Gaps = 19/207 (9%) Query: 192 FSFVLGIVL-SLFA-TRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249 FS V+G+ +L A RLS H K +YI +I G P LV + Y ++F Sbjct: 24 FSVVVGVGCGTLMALARLSSH---KVLSNAAKVYID--IIRGTPLLVQL---YLVYFGLA 75 Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309 + N +F+S IA+S T A+IAEI+RSG+ +V +GQMEAA ++G+ Sbjct: 76 TILDLN---------DFLSGVIAVSVNTTAYIAEIIRSGIQSVDKGQMEAARSMGMPKGM 126 Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369 A R ++LPQAM++I+P + +++ L+K +S+ +G DL+ T+ T +L+ Sbjct: 127 AMRQIILPQAMKNILPAIGNEFATLIKETSIVSLIGIHDLMYSSDTVRGATFTVFIPLLM 186 Query: 370 WMFIYLSLSIMIALFMNRLNAKIALKE 396 F+Y ++ IA FM++L K+ + Sbjct: 187 TAFLYFVMTTTIAFFMDKLERKLQASD 213 Score = 41.6 bits (96), Expect = 0.19, Method: Compositional matrix adjust. Identities = 20/69 (28%), Positives = 40/69 (57%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151 G T L+F ++ GTL+ RLS++K+++ +VY+++ R P LV ++ +Y Sbjct: 14 GATTTILLSFFSVVVGVGCGTLMALARLSSHKVLSNAAKVYIDIIRGTPLLVQLYLVYFG 73 Query: 152 VLSVLPIPD 160 + ++L + D Sbjct: 74 LATILDLND 82 >gi|261822384|ref|YP_003260490.1| polar amino acid ABC transporter inner membrane protein [Pectobacterium wasabiae WPP163] gi|261606397|gb|ACX88883.1| polar amino acid ABC transporter, inner membrane subunit [Pectobacterium wasabiae WPP163] Length = 224 Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 47/127 (37%), Positives = 80/127 (62%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 +S +A S + AA+ +EI+R+G+++V RGQ AA+ALG+TH ++ +LV+LPQA R+++ Sbjct: 96 RLISAMVAFSLFEAAYYSEIIRAGILSVSRGQSSAALALGMTHWQSMKLVILPQAFRAMV 155 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 P L +Q + L +++SL + AD TI + G +E+IL FIY SI ++ Sbjct: 156 PLLLTQGIVLFQDTSLVYVLSLADFFRTASTIGERDGTQVEMILFAGFIYFLFSITASML 215 Query: 385 MNRLNAK 391 ++ L + Sbjct: 216 VSYLKKR 222 Score = 40.4 bits (93), Expect = 0.54, Method: Compositional matrix adjust. Identities = 20/65 (30%), Positives = 39/65 (60%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151 G V T + + ++ + GT++ RLS K ++W ++YV +FR++P ++V+ + Y Sbjct: 19 GMVVTLEITLTAVVFGIVWGTILAVMRLSPIKPISWFAKLYVNLFRSVPLVMVLLWFYLV 78 Query: 152 VLSVL 156 V S+L Sbjct: 79 VPSLL 83 >gi|167836673|ref|ZP_02463556.1| binding-protein-dependent transport system inner membrane component [Burkholderia thailandensis MSMB43] Length = 241 Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 46/96 (47%), Positives = 66/96 (68%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 EF++ ++ LSCYT+AF+AE ++GL VP Q AA ALGL+ + R V+LPQA+R + Sbjct: 107 EFVAGWVGLSCYTSAFVAEEFQAGLRGVPAAQHHAASALGLSPLQTFRFVVLPQAVRIAL 166 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 PPL QY+NL+KNSSL +A+G A+L + +T Sbjct: 167 PPLFGQYMNLIKNSSLTMAIGVAELSYASRQVETET 202 >gi|295698918|ref|YP_003606811.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia sp. CCGE1002] gi|295438131|gb|ADG17300.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. CCGE1002] Length = 248 Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 58/143 (40%), Positives = 80/143 (55%), Gaps = 6/143 (4%) Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP--EFMSLYIALSCYT 277 PLL F FG TL+ L+ V + G + P EF++ ++ L+CYT Sbjct: 64 PLLVQLLFWYFGAATLLPQPWMEWLNASHTV----SLSGWTIAWPSFEFVAGWVGLTCYT 119 Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 AF+ E R+G+ V Q +AA ALGLT A R V+LPQA+R PPL QY+NL+KN Sbjct: 120 TAFVGEEFRAGMRGVNDAQHQAAAALGLTPLAAFRYVILPQAIRIATPPLAGQYMNLVKN 179 Query: 338 SSLAVAVGFADLVSVGGTIINQT 360 SSLA+ +G A+L V + +T Sbjct: 180 SSLAMTIGLAELSYVSRQVDTET 202 >gi|227114973|ref|ZP_03828629.1| glutamate/aspartate transport system permease protein [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 224 Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 47/127 (37%), Positives = 80/127 (62%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 +S +A S + AA+ +EI+R+G+++V RGQ AA+ALG+TH ++ +LV+LPQA R+++ Sbjct: 96 RLISAMVAFSLFEAAYYSEIIRAGILSVSRGQSSAALALGMTHWQSMKLVILPQAFRAMV 155 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 P L +Q + L +++SL + AD TI + G +E+IL FIY SI ++ Sbjct: 156 PLLLTQGIVLFQDTSLVYVLSLADFFRTASTIGERDGTQVEMILFAGFIYFLFSITASML 215 Query: 385 MNRLNAK 391 ++ L + Sbjct: 216 VSYLKKR 222 Score = 40.8 bits (94), Expect = 0.41, Method: Compositional matrix adjust. Identities = 21/65 (32%), Positives = 39/65 (60%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151 G V T + + ++ I GT++ RLS K ++W ++YV +FR++P ++V+ + Y Sbjct: 19 GMVVTLKITLTAVVFGIIWGTILAVMRLSPIKPISWFAKLYVNLFRSVPLVMVLLWFYLV 78 Query: 152 VLSVL 156 V S+L Sbjct: 79 VPSLL 83 >gi|116513634|ref|YP_812540.1| ABC-type amino acid transport system, permease [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|116092949|gb|ABJ58102.1| amino acid ABC transporter membrane protein 1, PAAT family [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|325125284|gb|ADY84614.1| Glutamine ABC transporter permease [Lactobacillus delbrueckii subsp. bulgaricus 2038] Length = 213 Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 55/122 (45%), Positives = 79/122 (64%), Gaps = 2/122 (1%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I LS Y++AFIAE VRSG+ +V GQME A + G+T+ +A R V+LPQA R +IP L +Q Sbjct: 91 IGLSIYSSAFIAETVRSGIQSVGTGQMEGARSNGMTYWQAMRYVILPQAFRIVIPSLGNQ 150 Query: 331 YLNLLKNSS-LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 ++NL+KNSS LA GF DL+ G + + T Q I ++ YL L++ ++ +M L Sbjct: 151 FVNLIKNSSILAFVAGF-DLMYQGDIVASNTFQTIPSYVLVSLFYLVLTLPLSYYMQYLE 209 Query: 390 AK 391 K Sbjct: 210 KK 211 >gi|37525273|ref|NP_928617.1| glutamate/aspartate transport system permease protein GltJ [Photorhabdus luminescens subsp. laumondii TTO1] gi|36784700|emb|CAE13600.1| Glutamate/aspartate transport system permease protein GltJ [Photorhabdus luminescens subsp. laumondii TTO1] Length = 246 Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 49/129 (37%), Positives = 79/129 (61%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+S L +TAA + E VR+ + ++PRGQ A +A+GLT + R VLLP A R IIP Sbjct: 111 FLSSTACLGLFTAARMCEQVRAAIQSLPRGQKAAGLAMGLTLPQTYRYVLLPNAYRVIIP 170 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 P+TS+ +NL+KNS++A +G D+ + G +++ + A E Y+ ++++I L M Sbjct: 171 PMTSEMMNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAYETFTAITLAYIGINLVIMLAM 230 Query: 386 NRLNAKIAL 394 + L K+ L Sbjct: 231 HLLEKKVRL 239 Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust. Identities = 28/77 (36%), Positives = 43/77 (55%) Query: 81 SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140 +++Y ++ GF T L+ I A I+G+L G R NK+++ I YVE+FRN+P Sbjct: 17 GNTTYLGWLIAGFQVTIALSICAWIIAFIVGSLFGILRTVPNKILSGIGTCYVELFRNVP 76 Query: 141 PLVVIFFLYKSVLSVLP 157 +V F Y V +LP Sbjct: 77 LIVQFFIWYLVVPELLP 93 >gi|315287081|gb|EFU46495.1| putative ATP synthase F0, A subunit [Escherichia coli MS 110-3] Length = 257 Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 49/129 (37%), Positives = 79/129 (61%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+S + L +TAA + E VR+ + ++PRGQ AA+A+GLT +A R VLLP A R I+P Sbjct: 122 FLSSMLCLGLFTAARVCEQVRAAIQSLPRGQKNAALAMGLTLPQAYRYVLLPNAYRVIVP 181 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 P+TS+ +NL+KNS++A +G D+ + G +++ + A E Y+ ++ I L M Sbjct: 182 PMTSEMMNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAWESFTAITLAYVLINAFIMLVM 241 Query: 386 NRLNAKIAL 394 + K+ L Sbjct: 242 TLVERKVRL 250 Score = 40.0 bits (92), Expect = 0.58, Method: Compositional matrix adjust. Identities = 24/77 (31%), Positives = 41/77 (53%) Query: 81 SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140 +++Y I GF T L+ I A ++G+ G R N+ ++ + +YVE+FRN+P Sbjct: 28 GNTTYLGWIWSGFQVTIALSICAWIIAFLVGSFFGILRTVPNRFLSGLGTLYVELFRNVP 87 Query: 141 PLVVIFFLYKSVLSVLP 157 +V F Y + +LP Sbjct: 88 LIVQFFTWYLVIPELLP 104 >gi|51595454|ref|YP_069645.1| ABC glutamate/aspartate transporter, permease subunit gltJ [Yersinia pseudotuberculosis IP 32953] gi|108808476|ref|YP_652392.1| putative glutamate/aspartate transport system permease [Yersinia pestis Antiqua] gi|108811263|ref|YP_647030.1| glutamate/aspartate transport system permease [Yersinia pestis Nepal516] gi|145599902|ref|YP_001163978.1| glutamate/aspartate transport system permease [Yersinia pestis Pestoides F] gi|153948463|ref|YP_001401883.1| glutamate/aspartate ABC transporter permease GltJ [Yersinia pseudotuberculosis IP 31758] gi|166008428|ref|ZP_02229326.1| glutamate/aspartate ABC transporter, permease protein GltJ [Yersinia pestis biovar Antiqua str. E1979001] gi|166212579|ref|ZP_02238614.1| glutamate/aspartate ABC transporter, permease protein GltJ [Yersinia pestis biovar Antiqua str. B42003004] gi|167399443|ref|ZP_02304967.1| glutamate/aspartate ABC transporter, permease protein GltJ [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167423628|ref|ZP_02315381.1| glutamate/aspartate ABC transporter, permease protein GltJ [Yersinia pestis biovar Mediaevalis str. K1973002] gi|170025232|ref|YP_001721737.1| polar amino acid ABC transporter inner membrane subunit [Yersinia pseudotuberculosis YPIII] gi|186894485|ref|YP_001871597.1| polar amino acid ABC transporter inner membrane subunit [Yersinia pseudotuberculosis PB1/+] gi|229895953|ref|ZP_04511123.1| glutamate and aspartate transporter subunit, membrane component of ABC superfamily [Yersinia pestis Pestoides A] gi|229901501|ref|ZP_04516623.1| glutamate and aspartate transporter subunit, membrane component of ABC superfamily [Yersinia pestis Nepal516] gi|270489687|ref|ZP_06206761.1| ABC transporter, permease protein [Yersinia pestis KIM D27] gi|294504418|ref|YP_003568480.1| glutamate/aspartate transport system permease [Yersinia pestis Z176003] gi|51588736|emb|CAH20347.1| ABC glutamate/aspartate transporter, permease subunit gltJ [Yersinia pseudotuberculosis IP 32953] gi|108774911|gb|ABG17430.1| glutamate/aspartate transport system permease [Yersinia pestis Nepal516] gi|108780389|gb|ABG14447.1| putative glutamate/aspartate transport system permease [Yersinia pestis Antiqua] gi|145211598|gb|ABP41005.1| glutamate/aspartate transport system permease [Yersinia pestis Pestoides F] gi|152959958|gb|ABS47419.1| glutamate/aspartate ABC transporter, permease protein GltJ [Yersinia pseudotuberculosis IP 31758] gi|165992810|gb|EDR45111.1| glutamate/aspartate ABC transporter, permease protein GltJ [Yersinia pestis biovar Antiqua str. E1979001] gi|166206510|gb|EDR50990.1| glutamate/aspartate ABC transporter, permease protein GltJ [Yersinia pestis biovar Antiqua str. B42003004] gi|167051947|gb|EDR63355.1| glutamate/aspartate ABC transporter, permease protein GltJ [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167057798|gb|EDR67544.1| glutamate/aspartate ABC transporter, permease protein GltJ [Yersinia pestis biovar Mediaevalis str. K1973002] gi|169751766|gb|ACA69284.1| polar amino acid ABC transporter, inner membrane subunit [Yersinia pseudotuberculosis YPIII] gi|186697511|gb|ACC88140.1| polar amino acid ABC transporter, inner membrane subunit [Yersinia pseudotuberculosis PB1/+] gi|229681430|gb|EEO77524.1| glutamate and aspartate transporter subunit, membrane component of ABC superfamily [Yersinia pestis Nepal516] gi|229700876|gb|EEO88905.1| glutamate and aspartate transporter subunit, membrane component of ABC superfamily [Yersinia pestis Pestoides A] gi|262362592|gb|ACY59313.1| glutamate/aspartate transport system permease [Yersinia pestis D106004] gi|262366404|gb|ACY62961.1| glutamate/aspartate transport system permease [Yersinia pestis D182038] gi|270338191|gb|EFA48968.1| ABC transporter, permease protein [Yersinia pestis KIM D27] gi|294354877|gb|ADE65218.1| glutamate/aspartate transport system permease [Yersinia pestis Z176003] gi|320016182|gb|ADV99753.1| glutamate and aspartate transporter subunit, membrane component of ABC superfamily [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 246 Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 50/129 (38%), Positives = 79/129 (61%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+S I L +TAA + E VR+G+ ++PRGQ A +A+GLT + R VLLP A R IIP Sbjct: 111 FLSSMICLGLFTAARVCEQVRAGIQSLPRGQKAAGLAMGLTLTQTYRYVLLPNAYRVIIP 170 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 P+TS+ LNL+KNS++A +G ++ + G +++ + A E Y+ ++ +I L M Sbjct: 171 PMTSEMLNLVKNSAIASTIGLVEMAAQAGKLLDYSAHAYESFTAITLGYVLINAVIMLLM 230 Query: 386 NRLNAKIAL 394 + K+ L Sbjct: 231 RLVEKKVQL 239 Score = 43.1 bits (100), Expect = 0.078, Method: Compositional matrix adjust. Identities = 26/78 (33%), Positives = 42/78 (53%) Query: 81 SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140 +++Y I GF T L+ + A +G+L G R N++++ I YVE+FRN+P Sbjct: 17 GNTTYLGWIWSGFQVTVALSLCAWVIAFFVGSLFGILRTVPNRILSGIGACYVELFRNVP 76 Query: 141 PLVVIFFLYKSVLSVLPI 158 +V F Y V +LP+ Sbjct: 77 LIVQFFTWYLVVPELLPV 94 >gi|148652492|ref|YP_001279585.1| polar amino acid ABC transporter inner membrane subunit [Psychrobacter sp. PRwf-1] gi|148571576|gb|ABQ93635.1| polar amino acid ABC transporter, inner membrane subunit [Psychrobacter sp. PRwf-1] Length = 248 Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 69/205 (33%), Positives = 107/205 (52%), Gaps = 9/205 (4%) Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL--HFD 247 ++ + +G VL + R KT + + +Y++ F +P LV + + + + Sbjct: 40 WILALGIGTVLGIM-----RTLPSKTARTIGTMYVTFFR--NIPLLVQLFFWFYVAPGWL 92 Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307 PVL ++ + G S +S I L +TAA I E VR+G+ ++P GQ AA ALG + Sbjct: 93 TPVLQEWWYKGLSPNMSAMISASIGLGLFTAARITEQVRTGIQSLPEGQHNAAYALGFST 152 Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367 +A R VLLPQA R I+PPL+S+ N KN+S+A VG +L+S TI T IEI Sbjct: 153 AQAYRQVLLPQAFRVILPPLSSELTNCYKNASIASLVGVMELISQTKTISEYTQNNIEIY 212 Query: 368 LIWMFIYLSLSIMIALFMNRLNAKI 392 IYL ++ + M + K+ Sbjct: 213 TYATIIYLLFNLSLIGIMGLIEQKL 237 >gi|91209695|ref|YP_539681.1| GltJ subunit of glutamate ABC transporter [Escherichia coli UTI89] gi|91071269|gb|ABE06150.1| GltJ, subunit of glutamate ABC transporter [Escherichia coli UTI89] gi|307627915|gb|ADN72219.1| glutamate and aspartate transporter subunit [Escherichia coli UM146] Length = 246 Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 49/129 (37%), Positives = 79/129 (61%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+S + L +TAA + E VR+ + ++PRGQ AA+A+GLT +A R VLLP A R I+P Sbjct: 111 FLSSMLCLGLFTAARVCEQVRAAIQSLPRGQKNAALAMGLTLPQAYRYVLLPNAYRVIVP 170 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 P+TS+ +NL+KNS++A +G D+ + G +++ + A E Y+ ++ I L M Sbjct: 171 PMTSEMMNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAWESFTAITLAYVLINAFIMLVM 230 Query: 386 NRLNAKIAL 394 + K+ L Sbjct: 231 TLVERKVRL 239 Score = 40.4 bits (93), Expect = 0.51, Method: Compositional matrix adjust. Identities = 24/77 (31%), Positives = 41/77 (53%) Query: 81 SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140 +++Y I GF T L+ I A ++G+ G R N+ ++ + +YVE+FRN+P Sbjct: 17 GNTTYLGWIWSGFQVTIALSICAWIIAFLVGSFFGILRTVPNRFLSGLGTLYVELFRNVP 76 Query: 141 PLVVIFFLYKSVLSVLP 157 +V F Y + +LP Sbjct: 77 LIVQFFTWYLVIPELLP 93 >gi|300927241|ref|ZP_07142972.1| putative ATP synthase F0, A subunit [Escherichia coli MS 182-1] gi|300951154|ref|ZP_07165018.1| putative ATP synthase F0, A subunit [Escherichia coli MS 116-1] gi|300996683|ref|ZP_07181508.1| putative ATP synthase F0, A subunit [Escherichia coli MS 200-1] gi|300304461|gb|EFJ58981.1| putative ATP synthase F0, A subunit [Escherichia coli MS 200-1] gi|300416791|gb|EFK00102.1| putative ATP synthase F0, A subunit [Escherichia coli MS 182-1] gi|300449583|gb|EFK13203.1| putative ATP synthase F0, A subunit [Escherichia coli MS 116-1] gi|315292093|gb|EFU51445.1| putative ATP synthase F0, A subunit [Escherichia coli MS 153-1] gi|324006309|gb|EGB75528.1| putative ATP synthase F0, A subunit [Escherichia coli MS 57-2] gi|324010471|gb|EGB79690.1| putative ATP synthase F0, A subunit [Escherichia coli MS 60-1] Length = 253 Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 49/129 (37%), Positives = 79/129 (61%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+S + L +TAA + E VR+ + ++PRGQ AA+A+GLT +A R VLLP A R I+P Sbjct: 118 FLSSMLCLGLFTAARVCEQVRAAIQSLPRGQKNAALAMGLTLPQAYRYVLLPNAYRVIVP 177 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 P+TS+ +NL+KNS++A +G D+ + G +++ + A E Y+ ++ I L M Sbjct: 178 PMTSEMMNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAWESFTAITLAYVLINAFIMLVM 237 Query: 386 NRLNAKIAL 394 + K+ L Sbjct: 238 TLVERKVRL 246 Score = 40.4 bits (93), Expect = 0.52, Method: Compositional matrix adjust. Identities = 24/77 (31%), Positives = 41/77 (53%) Query: 81 SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140 +++Y I GF T L+ I A ++G+ G R N+ ++ + +YVE+FRN+P Sbjct: 24 GNTTYLGWIWSGFQVTIALSICAWIIAFLVGSFFGILRTVPNRFLSGLGTLYVELFRNVP 83 Query: 141 PLVVIFFLYKSVLSVLP 157 +V F Y + +LP Sbjct: 84 LIVQFFTWYLVIPELLP 100 >gi|315299179|gb|EFU58433.1| putative ATP synthase F0, A subunit [Escherichia coli MS 16-3] Length = 256 Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 49/129 (37%), Positives = 79/129 (61%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+S + L +TAA + E VR+ + ++PRGQ AA+A+GLT +A R VLLP A R I+P Sbjct: 121 FLSSMLCLGLFTAARVCEQVRAAIQSLPRGQKNAALAMGLTLPQAYRYVLLPNAYRVIVP 180 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 P+TS+ +NL+KNS++A +G D+ + G +++ + A E Y+ ++ I L M Sbjct: 181 PMTSEMMNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAWESFTAITLAYVLINAFIMLVM 240 Query: 386 NRLNAKIAL 394 + K+ L Sbjct: 241 TLVERKVRL 249 Score = 40.4 bits (93), Expect = 0.53, Method: Compositional matrix adjust. Identities = 24/77 (31%), Positives = 41/77 (53%) Query: 81 SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140 +++Y I GF T L+ I A ++G+ G R N+ ++ + +YVE+FRN+P Sbjct: 27 GNTTYLGWIWSGFQVTIALSICAWIIAFLVGSFFGILRTVPNRFLSGLGTLYVELFRNVP 86 Query: 141 PLVVIFFLYKSVLSVLP 157 +V F Y + +LP Sbjct: 87 LIVQFFTWYLVIPELLP 103 >gi|262282395|ref|ZP_06060163.1| glutamine ABC transporter permease and substrate binding protein [Streptococcus sp. 2_1_36FAA] gi|262261686|gb|EEY80384.1| glutamine ABC transporter permease and substrate binding protein [Streptococcus sp. 2_1_36FAA] Length = 485 Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 60/209 (28%), Positives = 107/209 (51%), Gaps = 23/209 (11%) Query: 190 FVFSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243 F + V+GI+ +F+ R + +PL+ ++ F+ +G+P L+ Q Sbjct: 293 FAIALVIGIIFGMFSVSPYKPLRWIAEIFVDVIRGVPLMILAAFIFWGIPNLIESITNQQ 352 Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 + +F+ G+ IALS + A+IAEIVR G+ AVP GQMEA+ +L Sbjct: 353 SPIN-------DFVAGT----------IALSLNSGAYIAEIVRGGIQAVPVGQMEASRSL 395 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363 G+++ K R ++LPQA + ++P +Q++ LK++++ A+G +L G II + Q+ Sbjct: 396 GISYSKTMRKIILPQATKIMLPNFVNQFVIALKDTTIVSAIGLVELFQTGKNIIARNYQS 455 Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392 + I +YL + + RL +I Sbjct: 456 FRMYAILAVLYLLIITFLTRLAKRLEKRI 484 >gi|16128637|ref|NP_415187.1| glutamate and aspartate transporter subunit [Escherichia coli str. K-12 substr. MG1655] gi|26246628|ref|NP_752668.1| glutamate/aspartate transport system permease gltJ [Escherichia coli CFT073] gi|89107523|ref|AP_001303.1| glutamate and aspartate transporter subunit [Escherichia coli str. K-12 substr. W3110] gi|110640876|ref|YP_668604.1| glutamate/aspartate transport system permease protein GltJ [Escherichia coli 536] gi|117622863|ref|YP_851776.1| glutamate and aspartate transporter subunit [Escherichia coli APEC O1] gi|157155111|ref|YP_001461824.1| glutamate/aspartate ABC transporter, permease protein GltJ [Escherichia coli E24377A] gi|157160142|ref|YP_001457460.1| glutamate/aspartate ABC transporter, permease protein GltJ [Escherichia coli HS] gi|170020989|ref|YP_001725943.1| polar amino acid ABC transporter, inner membrane subunit [Escherichia coli ATCC 8739] gi|170080233|ref|YP_001729553.1| glutamate/aspartate ABC transporter membrane protein [Escherichia coli str. K-12 substr. DH10B] gi|170080334|ref|YP_001729654.1| glutamate/aspartate ABC transporter membrane protein [Escherichia coli str. K-12 substr. DH10B] gi|188496270|ref|ZP_03003540.1| glutamate/aspartate ABC transporter, permease protein GltJ [Escherichia coli 53638] gi|191168688|ref|ZP_03030468.1| glutamate/aspartate ABC transporter, permease protein GltJ [Escherichia coli B7A] gi|191173965|ref|ZP_03035483.1| glutamate/aspartate ABC transporter, permease protein GltJ [Escherichia coli F11] gi|194439894|ref|ZP_03071957.1| glutamate/aspartate ABC transporter, permease protein GltJ [Escherichia coli 101-1] gi|209917915|ref|YP_002291999.1| glutamate/aspartate ABC transporter permease [Escherichia coli SE11] gi|218549770|ref|YP_002383561.1| glutamate and aspartate ABC transporter membrane protein [Escherichia fergusonii ATCC 35469] gi|218557585|ref|YP_002390498.1| glutamate and aspartate transporter subunit ; membrane component of ABC superfamily [Escherichia coli S88] gi|218688470|ref|YP_002396682.1| glutamate and aspartate ABC transporter membrane protein [Escherichia coli ED1a] gi|218703988|ref|YP_002411507.1| glutamate and aspartate ABC transporter membrane protein [Escherichia coli UMN026] gi|227884373|ref|ZP_04002178.1| GltJ subunit of glutamate ABC superfamily ATP binding cassette transporter [Escherichia coli 83972] gi|237707379|ref|ZP_04537860.1| glutamate/aspartate transporter gltJ [Escherichia sp. 3_2_53FAA] gi|238899931|ref|YP_002925727.1| glutamate and aspartate transporter subunit [Escherichia coli BW2952] gi|253774362|ref|YP_003037193.1| polar amino acid ABC transporter inner membrane subunit [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254160733|ref|YP_003043841.1| glutamate and aspartate transporter subunit [Escherichia coli B str. REL606] gi|256023734|ref|ZP_05437599.1| glutamate and aspartate transporter subunit [Escherichia sp. 4_1_40B] gi|293403916|ref|ZP_06647910.1| glutamate Aspartate transport system permease gltJ [Escherichia coli FVEC1412] gi|293408780|ref|ZP_06652619.1| glutamate/aspartate transport system permease gltJ [Escherichia coli B354] gi|298379691|ref|ZP_06989296.1| glutamate/aspartate transport system permease gltJ [Escherichia coli FVEC1302] gi|300907832|ref|ZP_07125448.1| putative ATP synthase F0, A subunit [Escherichia coli MS 84-1] gi|300920530|ref|ZP_07136956.1| putative ATP synthase F0, A subunit [Escherichia coli MS 115-1] gi|300931589|ref|ZP_07146901.1| putative ATP synthase F0, A subunit [Escherichia coli MS 187-1] gi|300989987|ref|ZP_07179063.1| putative ATP synthase F0, A subunit [Escherichia coli MS 45-1] gi|301025219|ref|ZP_07188788.1| putative ATP synthase F0, A subunit [Escherichia coli MS 69-1] gi|301028863|ref|ZP_07192038.1| putative ATP synthase F0, A subunit [Escherichia coli MS 196-1] gi|301049844|ref|ZP_07196783.1| putative ATP synthase F0, A subunit [Escherichia coli MS 185-1] gi|301302136|ref|ZP_07208269.1| putative ATP synthase F0, A subunit [Escherichia coli MS 124-1] gi|301643930|ref|ZP_07243957.1| putative ATP synthase F0, A subunit [Escherichia coli MS 146-1] gi|306812921|ref|ZP_07447114.1| glutamate and aspartate transporter subunit [Escherichia coli NC101] gi|307137271|ref|ZP_07496627.1| glutamate and aspartate transporter subunit [Escherichia coli H736] gi|312970729|ref|ZP_07784910.1| amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Escherichia coli 1827-70] gi|331641158|ref|ZP_08342293.1| glutamate/aspartate transport system permease protein GltJ [Escherichia coli H736] gi|331645811|ref|ZP_08346914.1| glutamate/aspartate transport system permease protein GltJ [Escherichia coli M605] gi|331651667|ref|ZP_08352686.1| glutamate/aspartate transport system permease protein GltJ [Escherichia coli M718] gi|331656674|ref|ZP_08357636.1| glutamate/aspartate transport system permease protein GltJ [Escherichia coli TA206] gi|331662020|ref|ZP_08362943.1| glutamate/aspartate transport system permease protein GltJ [Escherichia coli TA143] gi|331672186|ref|ZP_08372978.1| glutamate/aspartate transport system permease protein GltJ [Escherichia coli TA280] gi|331682071|ref|ZP_08382695.1| glutamate/aspartate transport system permease protein GltJ [Escherichia coli H299] gi|84028709|sp|P0AER4|GLTJ_ECOL6 RecName: Full=Glutamate/aspartate transport system permease protein gltJ gi|84028710|sp|P0AER3|GLTJ_ECOLI RecName: Full=Glutamate/aspartate transport system permease protein gltJ gi|26107027|gb|AAN79211.1|AE016757_115 Glutamate/aspartate transport system permease protein gltJ [Escherichia coli CFT073] gi|624630|gb|AAA60980.1| GltJ [Escherichia coli] gi|1651273|dbj|BAA35306.1| glutamate and aspartate transporter subunit [Escherichia coli str. K12 substr. W3110] gi|1778572|gb|AAB40855.1| glutamate/aspartate transport system permease protein [Escherichia coli] gi|1786874|gb|AAC73755.1| glutamate and aspartate transporter subunit [Escherichia coli str. K-12 substr. MG1655] gi|110342468|gb|ABG68705.1| glutamate/aspartate transport system permease protein GltJ [Escherichia coli 536] gi|115511987|gb|ABJ00062.1| glutamate and aspartate transporter subunit [Escherichia coli APEC O1] gi|157065822|gb|ABV05077.1| glutamate/aspartate ABC transporter, permease protein GltJ [Escherichia coli HS] gi|157077141|gb|ABV16849.1| glutamate/aspartate ABC transporter, permease protein GltJ [Escherichia coli E24377A] gi|169755917|gb|ACA78616.1| polar amino acid ABC transporter, inner membrane subunit [Escherichia coli ATCC 8739] gi|169888068|gb|ACB01775.1| glutamate and aspartate transporter subunit; membrane component of ABC superfamily [Escherichia coli str. K-12 substr. DH10B] gi|169888169|gb|ACB01876.1| glutamate and aspartate transporter subunit; membrane component of ABC superfamily [Escherichia coli str. K-12 substr. DH10B] gi|188491469|gb|EDU66572.1| glutamate/aspartate ABC transporter, permease protein GltJ [Escherichia coli 53638] gi|190901280|gb|EDV61049.1| glutamate/aspartate ABC transporter, permease protein GltJ [Escherichia coli B7A] gi|190905741|gb|EDV65362.1| glutamate/aspartate ABC transporter, permease protein GltJ [Escherichia coli F11] gi|194421188|gb|EDX37212.1| glutamate/aspartate ABC transporter, permease protein GltJ [Escherichia coli 101-1] gi|209911174|dbj|BAG76248.1| glutamate/aspartate ABC transporter permease component [Escherichia coli SE11] gi|218357311|emb|CAQ89946.1| glutamate and aspartate transporter subunit ; membrane component of ABC superfamily [Escherichia fergusonii ATCC 35469] gi|218364354|emb|CAR02029.1| glutamate and aspartate transporter subunit ; membrane component of ABC superfamily [Escherichia coli S88] gi|218426034|emb|CAR06851.1| glutamate and aspartate transporter subunit ; membrane component of ABC superfamily [Escherichia coli ED1a] gi|218431085|emb|CAR11961.1| glutamate and aspartate transporter subunit ; membrane component of ABC superfamily [Escherichia coli UMN026] gi|222032407|emb|CAP75146.1| glutamate/aspartate transport system permease protein [Escherichia coli LF82] gi|226898589|gb|EEH84848.1| glutamate/aspartate transporter gltJ [Escherichia sp. 3_2_53FAA] gi|227838459|gb|EEJ48925.1| GltJ subunit of glutamate ABC superfamily ATP binding cassette transporter [Escherichia coli 83972] gi|238861327|gb|ACR63325.1| glutamate and aspartate transporter subunit [Escherichia coli BW2952] gi|242376427|emb|CAQ31129.1| gltJ, subunit of GltIJKL glutamate ABC transporter [Escherichia coli BL21(DE3)] gi|253325406|gb|ACT30008.1| polar amino acid ABC transporter, inner membrane subunit [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253972634|gb|ACT38305.1| glutamate and aspartate transporter subunit [Escherichia coli B str. REL606] gi|253976828|gb|ACT42498.1| glutamate and aspartate transporter subunit [Escherichia coli BL21(DE3)] gi|260450179|gb|ACX40601.1| polar amino acid ABC transporter, inner membrane subunit [Escherichia coli DH1] gi|281177802|dbj|BAI54132.1| glutamate/aspartate ABC transporter permease component [Escherichia coli SE15] gi|284920454|emb|CBG33515.1| glutamate/aspartate ABC transporter, permease protein [Escherichia coli 042] gi|291428502|gb|EFF01527.1| glutamate Aspartate transport system permease gltJ [Escherichia coli FVEC1412] gi|291471958|gb|EFF14441.1| glutamate/aspartate transport system permease gltJ [Escherichia coli B354] gi|294491275|gb|ADE90031.1| glutamate/aspartate ABC transporter, permease protein GltJ [Escherichia coli IHE3034] gi|298279389|gb|EFI20897.1| glutamate/aspartate transport system permease gltJ [Escherichia coli FVEC1302] gi|299878151|gb|EFI86362.1| putative ATP synthase F0, A subunit [Escherichia coli MS 196-1] gi|300298396|gb|EFJ54781.1| putative ATP synthase F0, A subunit [Escherichia coli MS 185-1] gi|300396148|gb|EFJ79686.1| putative ATP synthase F0, A subunit [Escherichia coli MS 69-1] gi|300400464|gb|EFJ84002.1| putative ATP synthase F0, A subunit [Escherichia coli MS 84-1] gi|300407262|gb|EFJ90800.1| putative ATP synthase F0, A subunit [Escherichia coli MS 45-1] gi|300412469|gb|EFJ95779.1| putative ATP synthase F0, A subunit [Escherichia coli MS 115-1] gi|300460613|gb|EFK24106.1| putative ATP synthase F0, A subunit [Escherichia coli MS 187-1] gi|300842688|gb|EFK70448.1| putative ATP synthase F0, A subunit [Escherichia coli MS 124-1] gi|301077700|gb|EFK92506.1| putative ATP synthase F0, A subunit [Escherichia coli MS 146-1] gi|305853684|gb|EFM54123.1| glutamate and aspartate transporter subunit [Escherichia coli NC101] gi|307552517|gb|ADN45292.1| glutamate/aspartate transport system permease [Escherichia coli ABU 83972] gi|309700893|emb|CBJ00190.1| glutamate/aspartate ABC transporter, permease protein [Escherichia coli ETEC H10407] gi|310337378|gb|EFQ02516.1| amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Escherichia coli 1827-70] gi|312945194|gb|ADR26021.1| glutamate and aspartate transporter subunit [Escherichia coli O83:H1 str. NRG 857C] gi|315135320|dbj|BAJ42479.1| glutamate Aspartate transport system permease [Escherichia coli DH1] gi|315255040|gb|EFU35008.1| putative ATP synthase F0, A subunit [Escherichia coli MS 85-1] gi|315616424|gb|EFU97041.1| amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Escherichia coli 3431] gi|320194171|gb|EFW68803.1| Glutamate Aspartate transport system permease protein GltJ [Escherichia coli WV_060327] gi|323191286|gb|EFZ76550.1| amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Escherichia coli RN587/1] gi|323938416|gb|EGB34670.1| inner membrane transport system [Escherichia coli E1520] gi|323943069|gb|EGB39228.1| inner membrane transport system [Escherichia coli E482] gi|323952775|gb|EGB48643.1| inner membrane transport system [Escherichia coli H252] gi|323963222|gb|EGB58790.1| inner membrane transport system [Escherichia coli H489] gi|323967601|gb|EGB63017.1| inner membrane transport system [Escherichia coli M863] gi|323972109|gb|EGB67323.1| inner membrane transport system [Escherichia coli TA007] gi|323976363|gb|EGB71453.1| inner membrane transport system [Escherichia coli TW10509] gi|324114775|gb|EGC08743.1| inner membrane transport system [Escherichia fergusonii B253] gi|325498167|gb|EGC96026.1| glutamate and aspartate transporter subunit [Escherichia fergusonii ECD227] gi|327254339|gb|EGE65961.1| amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Escherichia coli STEC_7v] gi|331037956|gb|EGI10176.1| glutamate/aspartate transport system permease protein GltJ [Escherichia coli H736] gi|331044563|gb|EGI16690.1| glutamate/aspartate transport system permease protein GltJ [Escherichia coli M605] gi|331049945|gb|EGI22003.1| glutamate/aspartate transport system permease protein GltJ [Escherichia coli M718] gi|331054922|gb|EGI26931.1| glutamate/aspartate transport system permease protein GltJ [Escherichia coli TA206] gi|331060442|gb|EGI32406.1| glutamate/aspartate transport system permease protein GltJ [Escherichia coli TA143] gi|331070653|gb|EGI42016.1| glutamate/aspartate transport system permease protein GltJ [Escherichia coli TA280] gi|331080750|gb|EGI51924.1| glutamate/aspartate transport system permease protein GltJ [Escherichia coli H299] Length = 246 Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 49/129 (37%), Positives = 79/129 (61%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+S + L +TAA + E VR+ + ++PRGQ AA+A+GLT +A R VLLP A R I+P Sbjct: 111 FLSSMLCLGLFTAARVCEQVRAAIQSLPRGQKNAALAMGLTLPQAYRYVLLPNAYRVIVP 170 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 P+TS+ +NL+KNS++A +G D+ + G +++ + A E Y+ ++ I L M Sbjct: 171 PMTSEMMNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAWESFTAITLAYVLINAFIMLVM 230 Query: 386 NRLNAKIAL 394 + K+ L Sbjct: 231 TLVERKVRL 239 Score = 40.4 bits (93), Expect = 0.50, Method: Compositional matrix adjust. Identities = 24/77 (31%), Positives = 41/77 (53%) Query: 81 SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140 +++Y I GF T L+ I A ++G+ G R N+ ++ + +YVE+FRN+P Sbjct: 17 GNTTYLGWIWSGFQVTIALSICAWIIAFLVGSFFGILRTVPNRFLSGLGTLYVELFRNVP 76 Query: 141 PLVVIFFLYKSVLSVLP 157 +V F Y + +LP Sbjct: 77 LIVQFFTWYLVIPELLP 93 >gi|317495050|ref|ZP_07953422.1| His/Glu/Gln/Arg/opine family amino ABC transporter [Gemella moribillum M424] gi|316914822|gb|EFV36296.1| His/Glu/Gln/Arg/opine family amino ABC transporter [Gemella moribillum M424] Length = 213 Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 49/135 (36%), Positives = 88/135 (65%), Gaps = 1/135 (0%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G + +P FMS IALS + A+++EI RSG++A+ +GQMEA +LGL++ + + ++LPQ Sbjct: 79 GISFTP-FMSAIIALSINSGAYVSEIFRSGILAIDKGQMEAGRSLGLSYFQTMKFIILPQ 137 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378 A+++ +P L +++++L+K SS+ VG AD++ T+ N T + LI IY ++ Sbjct: 138 ALKNSLPALGNEFISLVKESSIVYFVGVADIMFAANTVKNATYETFGPYLIAAAIYFIIT 197 Query: 379 IMIALFMNRLNAKIA 393 +++ + RL K+A Sbjct: 198 SVLSFLVKRLEKKLA 212 >gi|57234795|ref|YP_181163.1| His/Glu/Gln/Arg/opine ABC transporter permease [Dehalococcoides ethenogenes 195] gi|57225243|gb|AAW40300.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Dehalococcoides ethenogenes 195] Length = 273 Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 59/186 (31%), Positives = 106/186 (56%), Gaps = 20/186 (10%) Query: 191 VFSFVLGIVLSLFAT--RLSRH--------FHEKTGKALPLLYISTFLIFGLPTLVLIAL 240 V S+ L ++L +F RLS++ F+ + + +PLL + F P +++ ++ Sbjct: 68 VVSYFLMLILGMFGALGRLSKNTILRGLATFYVEIVRGIPLLVQLIWWYFAFP-VIIQSI 126 Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300 L+F + Q N P M+++ CY A+++EI R+G+ ++P+GQMEAA Sbjct: 127 GQGLNFGPMMNYQAN--------PIVMAIWGMTFCY-GAYMSEIYRAGIQSIPKGQMEAA 177 Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 +LG++H +A R V+LPQA+R ++PP+ ++++ LLK++SL V AD+V +G Sbjct: 178 RSLGMSHTQAMRYVILPQALRVVLPPMGNEFIALLKDTSLVSTVAVADMVRLGREFTATN 237 Query: 361 GQAIEI 366 IE+ Sbjct: 238 FNPIEV 243 >gi|330820726|ref|YP_004349588.1| binding-protein-dependent transport system inner membrane component [Burkholderia gladioli BSR3] gi|327372721|gb|AEA64076.1| binding-protein-dependent transport system inner membrane component [Burkholderia gladioli BSR3] Length = 243 Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 46/85 (54%), Positives = 63/85 (74%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 EF++ ++ LSCYTAAF+A SG+ V GQ +AA ALGLT +A R ++LPQA+R + Sbjct: 108 EFLAGWLGLSCYTAAFVAGEFASGIAGVREGQWQAAAALGLTPWQAFRHIVLPQAVRIAL 167 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADL 349 PPL QY+NL+KNSSL +A+G A+L Sbjct: 168 PPLFGQYMNLVKNSSLTMAIGLAEL 192 Score = 42.7 bits (99), Expect = 0.089, Method: Compositional matrix adjust. Identities = 50/180 (27%), Positives = 72/180 (40%), Gaps = 20/180 (11%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151 GF T LA + + +T +G + S + V + R+Y+ FRN P LV +FF Y Sbjct: 17 GFGVTLGLALAAGLSSTCLGAALALAGRSRWRAVRGVARLYIGAFRNTPLLVQLFFWYFG 76 Query: 152 VLSVLPIP-------DHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFA 204 ++LP H + P G R SF L + +FV G S A Sbjct: 77 AATLLPDEAIAWLNAQHVLPTPAGAL---RWPSFEFLAGWLGLSCYTAAFVAGEFASGIA 133 Query: 205 TRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQF-NFIGGSTVS 263 R + AL L F LP V IAL P+ GQ+ N + S+++ Sbjct: 134 G--VREGQWQAAAALGLTPWQAFRHIVLPQAVRIAL-------PPLFGQYMNLVKNSSLT 184 >gi|301329183|ref|ZP_07222176.1| putative ATP synthase F0, A subunit [Escherichia coli MS 78-1] gi|300844488|gb|EFK72248.1| putative ATP synthase F0, A subunit [Escherichia coli MS 78-1] Length = 259 Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 49/129 (37%), Positives = 79/129 (61%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+S + L +TAA + E VR+ + ++PRGQ AA+A+GLT +A R VLLP A R I+P Sbjct: 124 FLSSMLCLGLFTAARVCEQVRAAIQSLPRGQKNAALAMGLTLPQAYRYVLLPNAYRVIVP 183 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 P+TS+ +NL+KNS++A +G D+ + G +++ + A E Y+ ++ I L M Sbjct: 184 PMTSEMMNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAWESFTAITLAYVLINAFIMLVM 243 Query: 386 NRLNAKIAL 394 + K+ L Sbjct: 244 TLVERKVRL 252 Score = 40.4 bits (93), Expect = 0.51, Method: Compositional matrix adjust. Identities = 24/77 (31%), Positives = 41/77 (53%) Query: 81 SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140 +++Y I GF T L+ I A ++G+ G R N+ ++ + +YVE+FRN+P Sbjct: 30 GNTTYLGWIWSGFQVTIALSICAWIIAFLVGSFFGILRTVPNRFLSGLGTLYVELFRNVP 89 Query: 141 PLVVIFFLYKSVLSVLP 157 +V F Y + +LP Sbjct: 90 LIVQFFTWYLVIPELLP 106 >gi|104773642|ref|YP_618622.1| glutamine ABC transporter, permease protein [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|103422723|emb|CAI97350.1| Glutamine ABC transporter, permease protein [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] Length = 213 Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 55/122 (45%), Positives = 79/122 (64%), Gaps = 2/122 (1%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I LS Y++AFIAE VRSG+ +V GQME A + G+T+ +A R V+LPQA R +IP L +Q Sbjct: 91 IGLSIYSSAFIAETVRSGIQSVGTGQMEGARSNGMTYWQAMRYVILPQAFRIVIPSLGNQ 150 Query: 331 YLNLLKNSS-LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 ++NL+KNSS LA GF DL+ G + + T Q I ++ YL L++ ++ +M L Sbjct: 151 FVNLIKNSSILAFVAGF-DLMYQGDIVASNTFQTIPSYVLVSLFYLVLTLPLSYYMQYLE 209 Query: 390 AK 391 K Sbjct: 210 KK 211 >gi|224371141|ref|YP_002605305.1| ABC-type amino acid transport system, permease component [Desulfobacterium autotrophicum HRM2] gi|223693858|gb|ACN17141.1| ABC-type amino acid transport system, permease component [Desulfobacterium autotrophicum HRM2] Length = 229 Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 58/163 (35%), Positives = 96/163 (58%), Gaps = 6/163 (3%) Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSP-----EFMSLYIALSCYTAAFIAEIVRSGLI 290 VL + +L + P+L Q FI VSP F + + L+ + A+ +EI+R+G+I Sbjct: 65 VLARIYLELIRNTPLLVQLFFIY-FVVSPTLNISRFAAAVLTLALFEGAYASEIIRAGII 123 Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 ++P+GQ EAAI+LGL+ R V+LPQA+R ++PPLTSQ ++L+K+S+L + D+ Sbjct: 124 SIPQGQWEAAISLGLSRHHTFRHVILPQAIRIMLPPLTSQMVSLVKDSALVSTIAVYDIT 183 Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393 G I+ +T EI L IYL ++ ++L + K++ Sbjct: 184 MRGQEIMAETYLVFEIWLTIALIYLGITYTLSLVTRFMEKKLS 226 >gi|320178444|gb|EFW53412.1| Glutamate Aspartate transport system permease protein GltJ [Shigella boydii ATCC 9905] gi|332094326|gb|EGI99377.1| amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Shigella boydii 5216-82] Length = 246 Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 49/129 (37%), Positives = 79/129 (61%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+S + L +TAA + E VR+ + ++PRGQ AA+A+GLT +A R VLLP A R I+P Sbjct: 111 FLSSMLCLGLFTAARVCEQVRAAIQSLPRGQKNAALAMGLTLPQAYRYVLLPNAYRVIVP 170 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 P+TS+ +NL+KNS++A +G D+ + G +++ + A E Y+ ++ I L M Sbjct: 171 PMTSEMMNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAWESFTAITLAYVLINAFIMLVM 230 Query: 386 NRLNAKIAL 394 + K+ L Sbjct: 231 TLVERKVRL 239 Score = 40.4 bits (93), Expect = 0.53, Method: Compositional matrix adjust. Identities = 24/77 (31%), Positives = 41/77 (53%) Query: 81 SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140 +++Y I GF T L+ I A ++G+ G R N+ ++ + +YVE+FRN+P Sbjct: 17 GNTTYLGWIWSGFQVTIALSICAWIIAFLVGSFFGILRTVPNRFLSGLGTLYVELFRNVP 76 Query: 141 PLVVIFFLYKSVLSVLP 157 +V F Y + +LP Sbjct: 77 LIVQFFTWYLVIPELLP 93 >gi|253751794|ref|YP_003024935.1| putative glutamine ABC transporter, glutamine-binding protein/permease protein [Streptococcus suis SC84] gi|253753617|ref|YP_003026758.1| glutamine ABC transporter, glutamine-binding protein/permease protein [Streptococcus suis P1/7] gi|251816083|emb|CAZ51704.1| putative glutamine ABC transporter, glutamine-binding protein/permease protein [Streptococcus suis SC84] gi|251819863|emb|CAR45878.1| putative glutamine ABC transporter, glutamine-binding protein/permease protein [Streptococcus suis P1/7] gi|319758142|gb|ADV70084.1| amino acid ABC transporter periplasmic protein [Streptococcus suis JS14] Length = 732 Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 66/216 (30%), Positives = 115/216 (53%), Gaps = 25/216 (11%) Query: 168 GMFLNNRG--LSFPTLTMDTNAKIFVFSFVLGIVLSLFAT------RLSRHFHEKTGKAL 219 G+ NN G LS +T+ F + V+GI+ +FA R++ + + Sbjct: 516 GLLKNNYGQLLSGLGITIGLALLSFAIAIVIGIIFGMFAVSPVKALRVTSSVFVDVVRGI 575 Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279 PL+ ++ F+ +G+P L+ + + GQ + I +F++ IALS + A Sbjct: 576 PLMIVAAFIFWGIPNLI-----------ESMTGQQSPIN------DFVAGTIALSLNSGA 618 Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339 +IAEIVR G+ AVP GQMEA+ +LG+++ R ++LPQA + ++P +Q++ LK+++ Sbjct: 619 YIAEIVRGGIQAVPAGQMEASRSLGISYGTTMRKIILPQAGKIMLPNFINQFVITLKDTT 678 Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375 + A+G +L G II + Q+ + I IYL Sbjct: 679 IISAIGLVELFQAGKIIIARNYQSFRMYAILAIIYL 714 >gi|222153290|ref|YP_002562467.1| glutamine ABC transporter glutamine-binding protein/permease [Streptococcus uberis 0140J] gi|222114103|emb|CAR42546.1| putative glutamine ABC transporter, glutamine-binding protein/permease protein [Streptococcus uberis 0140J] Length = 724 Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 58/211 (27%), Positives = 109/211 (51%), Gaps = 27/211 (12%) Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPTLVLIALKYQ 243 F + ++GI+ + A S+ + + +PL+ ++ F+ +G+P L+ +Q Sbjct: 532 FAIAMIIGIIFGMMAVSPSKGMRIASSIFVDVVRGIPLMIVAAFIFWGVPNLIESMTGHQ 591 Query: 244 LHFDKPVLGQFNFIGGSTVSP--EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301 SP +F++ IALS A+IAEIVR G+ A+P GQMEA+ Sbjct: 592 -------------------SPINDFLAATIALSLNGGAYIAEIVRGGIEAIPAGQMEASR 632 Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361 +LG+ +R + ++LPQA++ ++P +Q++ LK++++ A+G +L G II + Sbjct: 633 SLGIPYRVTMKKIILPQAVKVMLPNFINQFVISLKDTTIVSAIGLVELFQTGKIIIARNY 692 Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 Q+ + I IYL + ++ RL ++ Sbjct: 693 QSFRMYAILAIIYLIMITLLTRLAKRLEKRL 723 >gi|146296045|ref|YP_001179816.1| polar amino acid ABC transporter, inner membrane subunit [Caldicellulosiruptor saccharolyticus DSM 8903] gi|145409621|gb|ABP66625.1| amino acid ABC transporter membrane protein, PAAT family [Caldicellulosiruptor saccharolyticus DSM 8903] Length = 220 Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 67/235 (28%), Positives = 118/235 (50%), Gaps = 38/235 (16%) Query: 178 FPTL------TMDTNAKIFVFSFVLGIVLSLFATRLSR--------HFHEKTGKALPLLY 223 FP L T++ A V G++ +LF R+S+ F+ + PLL Sbjct: 10 FPVLLKASVVTIELTAIAVTIGLVFGLIAALF--RISKLKILNLIGSFYVWLFRGTPLLL 67 Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283 F+ +GLP ++ P L P F++ IAL + A+ AE Sbjct: 68 QIFFIYYGLPKII------------PAL----------TLPAFLAGAIALIINSGAYTAE 105 Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343 I+R+ ++++ +GQ EAA ALG+T+ + R V++PQ + +IPP+ ++++ LLK+SSL Sbjct: 106 IIRAAILSIDKGQYEAAKALGMTYLQTMRYVIVPQTYKRLIPPIGNEFIALLKDSSLVST 165 Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 +G +L+ +QTG+ EI + + IYL+L+ + + N L ++ E + Sbjct: 166 IGMVELMRAAQLKASQTGRDAEIYIAALIIYLALTTVFSTIFNWLEKRLGRYEGQ 220 >gi|309795478|ref|ZP_07689895.1| ABC transporter, permease protein [Escherichia coli MS 145-7] gi|308120853|gb|EFO58115.1| ABC transporter, permease protein [Escherichia coli MS 145-7] gi|323958406|gb|EGB54112.1| inner membrane transport system [Escherichia coli H263] Length = 216 Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 49/129 (37%), Positives = 79/129 (61%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+S + L +TAA + E VR+ + ++PRGQ AA+A+GLT +A R VLLP A R I+P Sbjct: 81 FLSSMLCLGLFTAARVCEQVRAAIQSLPRGQKNAALAMGLTLPQAYRYVLLPNAYRVIVP 140 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 P+TS+ +NL+KNS++A +G D+ + G +++ + A E Y+ ++ I L M Sbjct: 141 PMTSEMMNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAWESFTAITLAYVLINAFIMLVM 200 Query: 386 NRLNAKIAL 394 + K+ L Sbjct: 201 TLVERKVRL 209 >gi|261250662|ref|ZP_05943237.1| putative amino acid ABC transporter permease protein [Vibrio orientalis CIP 102891] gi|260939231|gb|EEX95218.1| putative amino acid ABC transporter permease protein [Vibrio orientalis CIP 102891] Length = 246 Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 65/210 (30%), Positives = 116/210 (55%), Gaps = 29/210 (13%) Query: 191 VFSFVLGIVL---SLFATRLSRHFHE---KTGKALPLLYISTFLIFGLPTLVLIALKYQL 244 +F+ +G+V+ SL ++L + F+ + +++P+L + ++ +G+PTL+ I+L Sbjct: 57 LFAMTIGLVVALPSLSDSKLLKAFNRVYVEVIRSIPVLVLLLWVYYGMPTLMDISLD--- 113 Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304 HF V IAL+ +AF+AE+ R G+ A+ +GQ EAA +LG Sbjct: 114 HFWAGV--------------------IALTIAESAFMAEVFRGGIQAIAKGQHEAASSLG 153 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364 L + + RLV+LPQA+R I+PPL +Q++ +LK SSL +G +DL ++ + Sbjct: 154 LNYWQRMRLVILPQALRQILPPLGNQFIYILKMSSLVSVIGLSDLTRRANELVVNEYLPL 213 Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIAL 394 EI + YL L ++++ + L +IA+ Sbjct: 214 EIYTFLVLEYLVLILLVSQAVRWLERRIAI 243 Score = 43.9 bits (102), Expect = 0.039, Method: Compositional matrix adjust. Identities = 27/74 (36%), Positives = 45/74 (60%), Gaps = 1/74 (1%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 ++ GF +T ++ M+ A IG +V LS +KL+ RVYVEV R+IP LV++ ++ Sbjct: 41 LIAGFYDTISVSLLSMLFAMTIGLVVALPSLSDSKLLKAFNRVYVEVIRSIPVLVLLLWV 100 Query: 149 YKSVLSVLPIP-DH 161 Y + +++ I DH Sbjct: 101 YYGMPTLMDISLDH 114 >gi|161504172|ref|YP_001571284.1| hypothetical protein SARI_02279 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160865519|gb|ABX22142.1| hypothetical protein SARI_02279 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 246 Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 49/129 (37%), Positives = 80/129 (62%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+S I L +TAA + E VR+ + ++PRGQ AA+A+GLT + R VLLP A R I+P Sbjct: 111 FLSSMICLGLFTAARVCEQVRAAIQSLPRGQKNAALAMGLTLPQTYRYVLLPNAYRVIVP 170 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 P+TS+ +NL+KNS++A +G D+ + G +++ + A E Y+ ++ +I L M Sbjct: 171 PMTSEMMNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAWESFTAITLAYVLINAVIMLVM 230 Query: 386 NRLNAKIAL 394 + + K+ L Sbjct: 231 SLVERKVRL 239 Score = 42.0 bits (97), Expect = 0.17, Method: Compositional matrix adjust. Identities = 26/76 (34%), Positives = 43/76 (56%) Query: 82 DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141 +++Y I GF T L+ + I A +IG++ G R N+ ++ + +YVE+FRN+P Sbjct: 18 NTTYLGWIWSGFQVTVALSITAWIIAFLIGSIFGILRTVPNRFLSGLGALYVELFRNVPL 77 Query: 142 LVVIFFLYKSVLSVLP 157 +V F Y V +LP Sbjct: 78 IVQFFTWYLVVPELLP 93 >gi|218699019|ref|YP_002406648.1| glutamate and aspartate ABC transporter membrane protein [Escherichia coli IAI39] gi|218369005|emb|CAR16759.1| glutamate and aspartate transporter subunit ; membrane component of ABC superfamily [Escherichia coli IAI39] Length = 246 Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 49/129 (37%), Positives = 79/129 (61%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+S + L +TAA + E VR+ + ++PRGQ AA+A+GLT +A R VLLP A R I+P Sbjct: 111 FLSSMLCLGLFTAARVCEQVRAAIQSLPRGQKNAALAMGLTLPQAYRYVLLPNAYRVIVP 170 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 P+TS+ +NL+KNS++A +G D+ + G +++ + A E Y+ ++ I L M Sbjct: 171 PMTSEMMNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAWESFTAITLAYVLINAFIMLVM 230 Query: 386 NRLNAKIAL 394 + K+ L Sbjct: 231 TLVERKVRL 239 Score = 42.0 bits (97), Expect = 0.19, Method: Compositional matrix adjust. Identities = 25/77 (32%), Positives = 42/77 (54%) Query: 81 SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140 +++Y I GF T L+ I A ++G+L G R N+ ++ + +YVE+FRN+P Sbjct: 17 GNTTYLGWIWSGFQVTIALSICAWIIAFLVGSLFGILRTVPNRFLSGLGTLYVELFRNVP 76 Query: 141 PLVVIFFLYKSVLSVLP 157 +V F Y + +LP Sbjct: 77 LIVQFFTWYLVIPELLP 93 >gi|317047306|ref|YP_004114954.1| polar amino acid ABC transporter inner membrane subunit [Pantoea sp. At-9b] gi|316948923|gb|ADU68398.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea sp. At-9b] Length = 246 Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 47/129 (36%), Positives = 80/129 (62%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F S + L +T A ++E VR+ + ++PRGQ A +A+GLT + R VLLP A R I+P Sbjct: 111 FSSSVVCLGLFTGARVSEQVRAAIQSLPRGQKNAGLAMGLTLPQTYRYVLLPNAYRVIVP 170 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 P+TS+ LNL+KNS++A +G D+ + G +++ + A E Y++++++I L M Sbjct: 171 PMTSEMLNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAYESFTAITLAYIAINLVIMLLM 230 Query: 386 NRLNAKIAL 394 + + K+ L Sbjct: 231 SLVERKVRL 239 Score = 40.4 bits (93), Expect = 0.44, Method: Compositional matrix adjust. Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 5/85 (5%) Query: 69 GFEIDQGI----VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKL 124 G + + GI P+ +++Y + GF T ++ I A +G+ G R N+L Sbjct: 2 GIDWNWGIFLQPAPF-GNTTYLGWLWSGFQVTIAVSCCAWIIAFFVGSFFGILRTVPNRL 60 Query: 125 VAWICRVYVEVFRNIPPLVVIFFLY 149 ++ I YVE+FRNIP +V FF Y Sbjct: 61 LSTIGTCYVELFRNIPLIVQFFFWY 85 >gi|307133279|ref|YP_003885295.1| putative ABC transporter membrane protein [Dickeya dadantii 3937] gi|306530808|gb|ADN00739.1| putative ABC transporter membrane protein [Dickeya dadantii 3937] Length = 250 Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 60/143 (41%), Positives = 84/143 (58%), Gaps = 8/143 (5%) Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDK--PVLGQFNFIGGSTVSPEFMSLYIALSCYT 277 PLL F FG L+ L L+ P+LG + G + EF++ L+ Y+ Sbjct: 77 PLLVQLFFWYFGAAQLLPAGLMQWLNSPHVIPLLG----LNGPSF--EFLAGLFGLTLYS 130 Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 AAFIAE +R+G+ V GQ AA ALGLT +A R V+LPQA+R +PPL QY+N++KN Sbjct: 131 AAFIAEEIRAGIAGVAHGQKYAACALGLTDWQAMRYVVLPQALRIALPPLLGQYMNVIKN 190 Query: 338 SSLAVAVGFADLVSVGGTIINQT 360 SSLA+A+G A+L + +T Sbjct: 191 SSLAMAIGVAELSYASRQVETET 213 Score = 41.2 bits (95), Expect = 0.27, Method: Compositional matrix adjust. Identities = 29/89 (32%), Positives = 45/89 (50%), Gaps = 4/89 (4%) Query: 73 DQGIVPYTSD----SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWI 128 D+ I + +D Y + GF T +A + ++ AT +G ++ AGR S L+ W+ Sbjct: 6 DESIRQWLTDWLLAPQYLQWLWQGFQVTLGIAAATVVLATALGLVLAAGRDSRTPLLRWL 65 Query: 129 CRVYVEVFRNIPPLVVIFFLYKSVLSVLP 157 Y +FRN P LV +FF Y +LP Sbjct: 66 AIAYCSLFRNTPLLVQLFFWYFGAAQLLP 94 >gi|304395668|ref|ZP_07377551.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea sp. aB] gi|304356962|gb|EFM21326.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea sp. aB] Length = 246 Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 48/129 (37%), Positives = 80/129 (62%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+S I L +TAA + E VR+ + ++P GQ A +A+GLT + R VLLP A R I+P Sbjct: 111 FLSSMICLGLFTAARVCEQVRAAIQSLPSGQKNAGLAMGLTLPQTYRYVLLPNAYRVIVP 170 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 P+TS+ LNL+KNS++A +G D+ + G +++ + A E Y++++++I L M Sbjct: 171 PMTSEMLNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAYESFTAITLAYVAINLVIMLLM 230 Query: 386 NRLNAKIAL 394 + + K+ L Sbjct: 231 SLVERKVRL 239 Score = 40.8 bits (94), Expect = 0.34, Method: Compositional matrix adjust. Identities = 43/147 (29%), Positives = 67/147 (45%), Gaps = 24/147 (16%) Query: 69 GFEIDQGI----VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKL 124 G + + GI P+ +++Y + GF T ++ I A +G+ G R N+L Sbjct: 2 GIDWNWGIFLEQAPF-GNTTYLGWLWSGFQVTIAVSCCAWIIAFCVGSFFGILRTVPNRL 60 Query: 125 VAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMD 184 ++ I YVE+FRNIP +V FF Y L P+ + N G+ F + +D Sbjct: 61 LSTIGTCYVELFRNIPLIVQFFFWY------LVAPE--------LVGENLGMWFKS-ELD 105 Query: 185 TNAKIFVFSFVLGIVLSLF-ATRLSRH 210 N + F+ S I L LF A R+ Sbjct: 106 PNIQFFLSSM---ICLGLFTAARVCEQ 129 >gi|170767831|ref|ZP_02902284.1| glutamate/aspartate ABC transporter, permease protein GltJ [Escherichia albertii TW07627] gi|170123319|gb|EDS92250.1| glutamate/aspartate ABC transporter, permease protein GltJ [Escherichia albertii TW07627] Length = 246 Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 49/129 (37%), Positives = 80/129 (62%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+S + L +TAA + E VR+ + ++PRGQ AA+A+GLT +A R VLLP A R I+P Sbjct: 111 FLSSMLCLGLFTAARVCEQVRAAIQSLPRGQKNAALAMGLTLPQAYRYVLLPNAYRVIVP 170 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 P+TS+ +NL+KNS++A +G D+ + G +++ + A E Y+ ++ +I L M Sbjct: 171 PMTSEMMNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAWESFTAITLAYVLINAVIMLAM 230 Query: 386 NRLNAKIAL 394 + K+ L Sbjct: 231 TLVERKVRL 239 Score = 40.4 bits (93), Expect = 0.54, Method: Compositional matrix adjust. Identities = 24/77 (31%), Positives = 41/77 (53%) Query: 81 SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140 +++Y I GF T L+ I A ++G+ G R N+ ++ + +YVE+FRN+P Sbjct: 17 GNTTYLGWIWSGFQVTIALSICAWIIAFLVGSFFGILRTVPNRFLSGLGTLYVELFRNVP 76 Query: 141 PLVVIFFLYKSVLSVLP 157 +V F Y + +LP Sbjct: 77 LIVQFFTWYLVIPELLP 93 >gi|238020503|ref|ZP_04600929.1| hypothetical protein GCWU000324_00385 [Kingella oralis ATCC 51147] gi|237867483|gb|EEP68489.1| hypothetical protein GCWU000324_00385 [Kingella oralis ATCC 51147] Length = 279 Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 61/189 (32%), Positives = 105/189 (55%), Gaps = 9/189 (4%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFI--GGSTVS-----PEFMSL 269 + + LYI+ F G P V I + Y + F V Q I G V+ +++ Sbjct: 93 RTISWLYITFFR--GTPMYVQIFIWYFVWFVALVHPQHGLIVSGSEAVALRREYGAWIAG 150 Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329 +AL+ T A+I EI R+G+ ++ +GQMEAA +LGLT+ +A R ++LPQA+R ++PPL + Sbjct: 151 CLALTANTGAYITEIFRAGIQSIDKGQMEAARSLGLTYPQAMRFIILPQALRRMLPPLAN 210 Query: 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 +++ LLK+SSL + +L V TI + E + +YL+++I ++ F + L Sbjct: 211 EFITLLKDSSLLAMIAVPELAYVQKTISGRYSIYEEPLYTVALVYLAMTICLSAFFSWLE 270 Query: 390 AKIALKEKK 398 + + +K Sbjct: 271 KRFSTGHRK 279 >gi|146320886|ref|YP_001200597.1| amino acid ABC transporter periplasmic protein [Streptococcus suis 98HAH33] gi|145691692|gb|ABP92197.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Streptococcus suis 98HAH33] Length = 734 Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 66/216 (30%), Positives = 115/216 (53%), Gaps = 25/216 (11%) Query: 168 GMFLNNRG--LSFPTLTMDTNAKIFVFSFVLGIVLSLFAT------RLSRHFHEKTGKAL 219 G+ NN G LS +T+ F + V+GI+ +FA R++ + + Sbjct: 518 GLLKNNYGQLLSGLGITIGLALLSFAIAIVIGIIFGMFAVSPVKALRVTSSVFVDVVRGI 577 Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279 PL+ ++ F+ +G+P L+ + + GQ + I +F++ IALS + A Sbjct: 578 PLMIVAAFIFWGIPNLI-----------ESMTGQQSPIN------DFVAGTIALSLNSGA 620 Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339 +IAEIVR G+ AVP GQMEA+ +LG+++ R ++LPQA + ++P +Q++ LK+++ Sbjct: 621 YIAEIVRGGIQAVPAGQMEASRSLGISYGTTMRKIILPQAGKIMLPNFINQFVITLKDTT 680 Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375 + A+G +L G II + Q+ + I IYL Sbjct: 681 IISAIGLVELFQAGKIIIARNYQSFRMYAILAIIYL 716 >gi|224541592|ref|ZP_03682131.1| hypothetical protein CATMIT_00763 [Catenibacterium mitsuokai DSM 15897] gi|224525504|gb|EEF94609.1| hypothetical protein CATMIT_00763 [Catenibacterium mitsuokai DSM 15897] Length = 232 Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 64/182 (35%), Positives = 106/182 (58%), Gaps = 9/182 (4%) Query: 195 VLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY--QLHFDKPVLG 252 ++GI++ L T S+ K KA+ LYI ++I G P LV I + Y +P Sbjct: 35 IIGIIVGLVNTLKSKSVIMKILKAIANLYI--YIIRGTPMLVQILIIYFGLGQMLRPTGF 92 Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312 ++ IGG+ F + +ALS A++AEIVR G+ AV +GQ+EAA +LGLT+ K + Sbjct: 93 RWLNIGGT-----FTAGTVALSLNAGAYMAEIVRGGIEAVDKGQIEAARSLGLTYGKTMK 147 Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372 ++LPQA+R+++P + +Q++ +K++SL +G +L +VG TI + +I +M Sbjct: 148 KIVLPQALRTMLPSIINQFIISIKDTSLLSVIGLTELTNVGKTIAATQSAHMMVIYCFMA 207 Query: 373 IY 374 Y Sbjct: 208 CY 209 >gi|291280398|ref|YP_003497233.1| amino acid ABC transporter permease [Deferribacter desulfuricans SSM1] gi|290755100|dbj|BAI81477.1| amino acid ABC transporter, permease [Deferribacter desulfuricans SSM1] Length = 313 Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 58/177 (32%), Positives = 93/177 (52%), Gaps = 14/177 (7%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 K L + YI LI G P LV I + Y FIG F + AL+ + Sbjct: 148 KKLAITYIE--LIRGTPLLVQIFIFY------------FFIGTVLQLNRFTAGVAALAVF 193 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 A++AEIVR+G+ ++ RGQ EAA +LG+ + + R ++LPQA++ IPP+ Q+++L+K Sbjct: 194 AGAYVAEIVRAGIQSIHRGQTEAARSLGMNYFQTMRYIILPQALKRTIPPMAGQFISLIK 253 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393 +SSL + DL G ++ T Q E+ +YL L+ ++ L ++A Sbjct: 254 DSSLVSVISITDLTKAGREVVTSTFQPFEVWFTVAALYLILTTTLSFLTQLLERRLA 310 >gi|322391787|ref|ZP_08065252.1| amino acid ABC superfamily ATP binding cassette transporter [Streptococcus peroris ATCC 700780] gi|321145267|gb|EFX40663.1| amino acid ABC superfamily ATP binding cassette transporter [Streptococcus peroris ATCC 700780] Length = 481 Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 56/176 (31%), Positives = 101/176 (57%), Gaps = 17/176 (9%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 + +PL+ ++ F+ +G+P +F + + GQ + I +F++ IALS Sbjct: 322 RGIPLMILAAFIFWGIP-----------NFIESLTGQQSPIN------DFVAGTIALSLN 364 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 +AA+IAEIVR G+ AVP GQMEA+ +LG+++ K R ++LPQA + ++P +Q++ LK Sbjct: 365 SAAYIAEIVRGGIKAVPVGQMEASRSLGISYGKTMRKIVLPQATKLMLPNFVNQFVIALK 424 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 ++++ A+G +L G II + Q+ ++ I YL + ++ RL +I Sbjct: 425 DTTIVSAIGLVELFQTGKIIIARNYQSFKMYAILAVFYLVIITLLTRLAKRLEKRI 480 >gi|291616687|ref|YP_003519429.1| GltJ [Pantoea ananatis LMG 20103] gi|291151717|gb|ADD76301.1| GltJ [Pantoea ananatis LMG 20103] gi|327393113|dbj|BAK10535.1| glutamate/aspartate transport system permease protein GltJ [Pantoea ananatis AJ13355] Length = 246 Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 47/129 (36%), Positives = 79/129 (61%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+S + L +TAA + E VR+ + ++PRGQ A +A+GLT + R VLLP A R I+P Sbjct: 111 FISSVVCLGLFTAARVCEQVRAAIQSLPRGQKNAGLAMGLTLPQTYRYVLLPNAYRVIVP 170 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 P+TS+ LNL+KNS++A +G D+ + G +++ + A E Y+ ++++I + M Sbjct: 171 PMTSEMLNLVKNSAIASTIGLVDMAAQAGKLLDYSSHAYESFTAITLAYVGINLVIMVLM 230 Query: 386 NRLNAKIAL 394 + K+ L Sbjct: 231 GLVERKVRL 239 Score = 40.4 bits (93), Expect = 0.43, Method: Compositional matrix adjust. Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 5/85 (5%) Query: 69 GFEIDQGI----VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKL 124 G + + GI P+ +++Y + GF T ++ I A +G+ G R N+L Sbjct: 2 GIDWNWGIFLEQAPF-GNTTYLGWLWSGFQVTIAVSCCAWIIAFCVGSFFGILRTVPNRL 60 Query: 125 VAWICRVYVEVFRNIPPLVVIFFLY 149 ++ I YVE+FRNIP +V FF Y Sbjct: 61 LSTIGTCYVELFRNIPLIVQFFFWY 85 >gi|322418599|ref|YP_004197822.1| polar amino acid ABC transporter inner membrane subunit [Geobacter sp. M18] gi|320124986|gb|ADW12546.1| polar amino acid ABC transporter, inner membrane subunit [Geobacter sp. M18] Length = 233 Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 61/177 (34%), Positives = 105/177 (59%), Gaps = 13/177 (7%) Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281 L+I+T I GLP L++I + ++F P L G TV PE ++ + L+ +T+A++ Sbjct: 68 LFINT--IRGLPLLMVI---FWMYFLLPALM------GRTV-PEATTVIMGLTLFTSAYM 115 Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341 ++IVR+G+ +P+GQ EAAI+ GL +A ++LPQ +R++IP +Q+++L+K++SLA Sbjct: 116 SQIVRAGIQGIPKGQTEAAISTGLKPWQAMLYIVLPQGLRNMIPSFVNQFVSLIKDTSLA 175 Query: 342 VAVGFADLVSVGGTIINQT-GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 VG ++L VG I N+T EI + +Y L F L ++A ++ Sbjct: 176 FIVGVSELTHVGTQINNRTMAYPTEIFIFIAAVYFVLCFAFTSFSRWLEGRLAWRKS 232 >gi|332107600|gb|EGJ08824.1| ABC transporter permease [Rubrivivax benzoatilyticus JA2] Length = 245 Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 58/136 (42%), Positives = 79/136 (58%), Gaps = 14/136 (10%) Query: 220 PLLYISTFLIFGLPTLV------LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273 PLL F FGLP L+ + ++L VL +F EF++ L Sbjct: 66 PLLVQLFFWYFGLPALLPEDLLPWLNTPHELALGGLVLRWPSF--------EFLAAVTGL 117 Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333 Y+AA++ E +RSGL VP GQ EA IALGLT +A R V+LPQA+R +PPL QY+N Sbjct: 118 VFYSAAYVGEDIRSGLRGVPAGQREAGIALGLTPWQALRHVVLPQALRIALPPLLGQYMN 177 Query: 334 LLKNSSLAVAVGFADL 349 +LKN+SL +A+G +L Sbjct: 178 ILKNTSLGMAIGLLEL 193 >gi|312127065|ref|YP_003991939.1| polar amino acid ABC transporter inner membrane subunit [Caldicellulosiruptor hydrothermalis 108] gi|311777084|gb|ADQ06570.1| polar amino acid ABC transporter, inner membrane subunit [Caldicellulosiruptor hydrothermalis 108] Length = 220 Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 65/226 (28%), Positives = 116/226 (51%), Gaps = 32/226 (14%) Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSR--------HFHEKTGKALPLLYISTFLIFGL 232 +T++ A V G+V +LF R+S+ F+ + PLL F+ +GL Sbjct: 19 VTIELTAIAVTIGLVFGLVAALF--RISKIKVLNYIGSFYVWLFRGTPLLLQIFFIYYGL 76 Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292 P +V P L P F++ IAL + A+ AEI+R+ ++++ Sbjct: 77 PKIV------------PAL----------TLPAFLAGAIALIINSGAYTAEIIRAAILSI 114 Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352 +GQ EAA ALG+T+ + R V++PQ + +IPP+ ++++ LLK+SSL +G +L+ Sbjct: 115 DKGQYEAAKALGMTYLQTMRYVIVPQTYKRLIPPIGNEFIALLKDSSLVSTIGMVELMRA 174 Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 + TG+ EI + + IYL+L+ + + N L ++ E++ Sbjct: 175 AQLKASATGRDAEIYIAALVIYLALTTVFSTIFNWLEKRLGKYEQQ 220 >gi|215485687|ref|YP_002328118.1| glutamate/aspartate transport system permease GltJ; membrane component of ABC superfamily [Escherichia coli O127:H6 str. E2348/69] gi|312965094|ref|ZP_07779331.1| amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Escherichia coli 2362-75] gi|215263759|emb|CAS08095.1| glutamate/aspartate transport system permease GltJ; membrane component of ABC superfamily [Escherichia coli O127:H6 str. E2348/69] gi|312290185|gb|EFR18068.1| amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Escherichia coli 2362-75] Length = 246 Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 49/129 (37%), Positives = 79/129 (61%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+S + L +TAA + E VR+ + ++PRGQ AA+A+GLT +A R VLLP A R I+P Sbjct: 111 FLSSILCLGLFTAARVCEQVRAAIQSLPRGQKNAALAMGLTLPQAYRYVLLPNAYRVIVP 170 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 P+TS+ +NL+KNS++A +G D+ + G +++ + A E Y+ ++ I L M Sbjct: 171 PMTSEMMNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAWESFTAITLAYVLINAFIMLVM 230 Query: 386 NRLNAKIAL 394 + K+ L Sbjct: 231 TLVERKVRL 239 Score = 40.4 bits (93), Expect = 0.53, Method: Compositional matrix adjust. Identities = 24/77 (31%), Positives = 41/77 (53%) Query: 81 SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140 +++Y I GF T L+ I A ++G+ G R N+ ++ + +YVE+FRN+P Sbjct: 17 GNTTYLGWIWSGFQVTIALSICAWIIAFLVGSFFGILRTVPNRFLSGLGTLYVELFRNVP 76 Query: 141 PLVVIFFLYKSVLSVLP 157 +V F Y + +LP Sbjct: 77 LIVQFFTWYLVIPELLP 93 >gi|307155069|ref|YP_003890453.1| polar amino acid ABC transporter inner membrane subunit [Cyanothece sp. PCC 7822] gi|306985297|gb|ADN17178.1| polar amino acid ABC transporter, inner membrane subunit [Cyanothece sp. PCC 7822] Length = 511 Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 56/160 (35%), Positives = 94/160 (58%), Gaps = 4/160 (2%) Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290 G P LV + + ++F P L Q + +G P F + IALS AA++AEI+R G+ Sbjct: 341 GTPMLVQL---FIIYFGLPALFQ-DHLGIEWSLPRFPAAVIALSLNVAAYLAEIIRGGIE 396 Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 ++ RGQ EA +LG+T ++ + V+ PQA R I+PPL ++++ L+K++SL +GF +L Sbjct: 397 SIDRGQWEACESLGMTPQQTMQDVIFPQAFRRILPPLGNEFITLIKDTSLTAVIGFQELF 456 Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 G I+ T +A E+ + +YL L+ + ++ L A Sbjct: 457 REGQLIVAVTYKAFEVYIAVALVYLILTSLSSIAFKWLEA 496 Score = 36.6 bits (83), Expect = 7.9, Method: Compositional matrix adjust. Identities = 16/39 (41%), Positives = 24/39 (61%) Query: 111 GTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 GTL+ +S L+ +CR+YV+ FR P LV +F +Y Sbjct: 314 GTLIALALISPYSLLRLLCRIYVDFFRGTPMLVQLFIIY 352 >gi|303229872|ref|ZP_07316648.1| putative glutamine ABC transporter, permease protein GlnP [Veillonella atypica ACS-134-V-Col7a] gi|303232148|ref|ZP_07318851.1| putative glutamine ABC transporter, permease protein GlnP [Veillonella atypica ACS-049-V-Sch6] gi|302513254|gb|EFL55293.1| putative glutamine ABC transporter, permease protein GlnP [Veillonella atypica ACS-049-V-Sch6] gi|302515428|gb|EFL57394.1| putative glutamine ABC transporter, permease protein GlnP [Veillonella atypica ACS-134-V-Col7a] Length = 216 Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 67/215 (31%), Positives = 119/215 (55%), Gaps = 17/215 (7%) Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240 +T+ A F F++G+++SL +R + + + Y+ +I G P LV I Sbjct: 19 MTIKITAVAVSFGFIIGLIVSL-----ARMSNFVIVRLIAKCYVD--VIRGTPMLVQI-- 69 Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300 + ++F P I G+ + P +++ A S + A+++EI R+G+ +V +GQMEA Sbjct: 70 -FMIYFALPQ------IIGTRIDP-YIAACAACSINSGAYVSEIFRAGIQSVNKGQMEAG 121 Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 +LGL+ + R +++PQA ++ IPPL ++++ +LK+SSL +GF +L+ G II +T Sbjct: 122 RSLGLSWWQTMRFIIIPQAFKASIPPLGNEFIAMLKDSSLVSVIGFEELMRRGQLIIAKT 181 Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395 A EI IYL ++I I+ + L K +K Sbjct: 182 YAATEIWGTVAIIYLCMTIPISRLVAYLERKYNVK 216 >gi|257865935|ref|ZP_05645588.1| amino acid ABC transporter [Enterococcus casseliflavus EC30] gi|257872268|ref|ZP_05651921.1| amino acid ABC transporter [Enterococcus casseliflavus EC10] gi|257799869|gb|EEV28921.1| amino acid ABC transporter [Enterococcus casseliflavus EC30] gi|257806432|gb|EEV35254.1| amino acid ABC transporter [Enterococcus casseliflavus EC10] Length = 717 Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 57/192 (29%), Positives = 103/192 (53%), Gaps = 29/192 (15%) Query: 190 FVFSFVLGIVLSLF------ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243 F + V+GI+ LF A R+ + + +P++ ++ F+ FGL + I + Sbjct: 531 FALALVIGIIFGLFSVAPIKALRVFAGIYVDIIRGIPMMVLAFFIFFGLSDAIGITI--- 587 Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 P+F + I L+ +A+IAEIVR G+ AVP+GQMEA+ +L Sbjct: 588 --------------------PDFAAGVITLTLNASAYIAEIVRGGINAVPKGQMEASRSL 627 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363 G+T+ + + ++LPQA++ +IP +Q++ LK++++ +G +L+ G I+ +T Q+ Sbjct: 628 GMTYTRTMQKIILPQAIKIMIPSFVNQFVISLKDTTIISVIGVVELLQTGKIIVARTTQS 687 Query: 364 IEIILIWMFIYL 375 + LI IYL Sbjct: 688 TYVYLIIAIIYL 699 >gi|237737255|ref|ZP_04567736.1| amino acid ABC transporter permease [Fusobacterium mortiferum ATCC 9817] gi|229421117|gb|EEO36164.1| amino acid ABC transporter permease [Fusobacterium mortiferum ATCC 9817] Length = 236 Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 72/230 (31%), Positives = 121/230 (52%), Gaps = 24/230 (10%) Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHF----HEKTGKALPLLYISTF--- 227 GLSF ++ T A + LGI ++L +LS HF H K K L F Sbjct: 23 GLSF---SVGTTALAAIIGIALGIFIALL--QLS-HFYPFKHSKNWKKFNPLSKLAFGYV 76 Query: 228 -LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286 LI G P +V QL +L F+G +P + I+ + A++AEI+R Sbjct: 77 DLIRGTPAVV------QLM----ILANLIFVGSLRDTPILVIAAISFGINSGAYVAEIIR 126 Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346 +G+ + +GQMEAA ALG+ + ++ + +++PQA++ I+P L S+++ LLK +S+ +G Sbjct: 127 AGIEGLDKGQMEAARALGMNYGQSMKEIIIPQAVKKILPALVSEFITLLKETSIVGFIGG 186 Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 DL+ I +QT + +E +L FIYL ++ + FM R+ + + + Sbjct: 187 VDLLRSANIITSQTYRGVEPLLAVGFIYLIMTAVFTKFMRRVEKGLKVSD 236 >gi|319941415|ref|ZP_08015743.1| hypothetical protein HMPREF9464_00962 [Sutterella wadsworthensis 3_1_45B] gi|319805035|gb|EFW01865.1| hypothetical protein HMPREF9464_00962 [Sutterella wadsworthensis 3_1_45B] Length = 221 Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 49/140 (35%), Positives = 84/140 (60%), Gaps = 1/140 (0%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G + P F++ A S + A+IAEI R G+ ++ +GQ A ++LG+T+ + R ++LPQ Sbjct: 83 GHRIDP-FIAAVTACSLNSGAYIAEIFRGGIQSISQGQFRAGLSLGMTYGQTMRYIVLPQ 141 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378 A + IIPPL ++++ +LK+SSL +GF +L G II +T +EI IYL+L+ Sbjct: 142 AFKRIIPPLGNEFIAMLKDSSLVSVIGFEELTRSGQLIIAETYGTLEIWTCVAIIYLTLT 201 Query: 379 IMIALFMNRLNAKIALKEKK 398 + I+ F+ L + + + Sbjct: 202 LTISRFVAALEKRFRKSDDR 221 >gi|238793126|ref|ZP_04636754.1| Binding-protein-dependent transport system inner membrane component [Yersinia intermedia ATCC 29909] gi|238727499|gb|EEQ19025.1| Binding-protein-dependent transport system inner membrane component [Yersinia intermedia ATCC 29909] Length = 245 Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 50/110 (45%), Positives = 74/110 (67%), Gaps = 2/110 (1%) Query: 253 QFNFIGGSTVSP--EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 + FIG + P EF++ +I L+ Y+ AFIAE +RSG+ V +GQ AA ALGLT ++ Sbjct: 99 EITFIGLTLGWPSFEFLAGFIGLTLYSTAFIAEELRSGISGVAKGQKYAAHALGLTGWQS 158 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 R V+LPQA++ +PPL QY+N++KNSSLA+A+G A+L + +T Sbjct: 159 MRHVVLPQALKIAMPPLLGQYMNIIKNSSLAMAIGVAELSYASRQVETET 208 Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust. Identities = 25/74 (33%), Positives = 39/74 (52%) Query: 84 SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143 Y + GF+ T W++ ++ AT++G L+ A R S K + W Y +FRN P L+ Sbjct: 14 QYLNWLWQGFLLTLWISACTVVAATLLGFLLAAARDSELKALRWFAVGYSTLFRNTPLLI 73 Query: 144 VIFFLYKSVLSVLP 157 +FF Y + LP Sbjct: 74 QLFFWYFAASQFLP 87 >gi|325570015|ref|ZP_08145940.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus casseliflavus ATCC 12755] gi|325156843|gb|EGC69014.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus casseliflavus ATCC 12755] Length = 760 Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 57/192 (29%), Positives = 103/192 (53%), Gaps = 29/192 (15%) Query: 190 FVFSFVLGIVLSLF------ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243 F + V+GI+ LF A R+ + + +P++ ++ F+ FGL + I + Sbjct: 574 FALALVIGIIFGLFSVAPIKALRVFAGIYVDIIRGIPMMVLAFFIFFGLSDAIGITI--- 630 Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 P+F + I L+ +A+IAEIVR G+ AVP+GQMEA+ +L Sbjct: 631 --------------------PDFAAGVITLTLNASAYIAEIVRGGINAVPKGQMEASRSL 670 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363 G+T+ + + ++LPQA++ +IP +Q++ LK++++ +G +L+ G I+ +T Q+ Sbjct: 671 GMTYTRTMQKIILPQAIKIMIPSFVNQFVISLKDTTIISVIGVVELLQTGKIIVARTTQS 730 Query: 364 IEIILIWMFIYL 375 + LI IYL Sbjct: 731 TYVYLIIAIIYL 742 >gi|257875562|ref|ZP_05655215.1| amino acid ABC transporter [Enterococcus casseliflavus EC20] gi|257809728|gb|EEV38548.1| amino acid ABC transporter [Enterococcus casseliflavus EC20] Length = 712 Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 57/192 (29%), Positives = 103/192 (53%), Gaps = 29/192 (15%) Query: 190 FVFSFVLGIVLSLF------ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243 F + V+GI+ LF A R+ + + +P++ ++ F+ FGL + I + Sbjct: 526 FALALVIGIIFGLFSVAPIKALRVFAGIYVDIIRGIPMMVLAFFIFFGLSDAIGITI--- 582 Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 P+F + I L+ +A+IAEIVR G+ AVP+GQMEA+ +L Sbjct: 583 --------------------PDFAAGVITLTLNASAYIAEIVRGGINAVPKGQMEASRSL 622 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363 G+T+ + + ++LPQA++ +IP +Q++ LK++++ +G +L+ G I+ +T Q+ Sbjct: 623 GMTYTRTMQKIILPQAIKIMIPSFVNQFVISLKDTTIISVIGVVELLQTGKIIVARTTQS 682 Query: 364 IEIILIWMFIYL 375 + LI IYL Sbjct: 683 TYVYLIIAIIYL 694 >gi|170016504|ref|YP_001727423.1| ABC-type amino acid transport system, permease component [Leuconostoc citreum KM20] gi|169803361|gb|ACA81979.1| ABC-type amino acid transport system, permease component [Leuconostoc citreum KM20] Length = 213 Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 52/127 (40%), Positives = 80/127 (62%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 FMS IAL YT+AFIAE VR+G++++ GQME A A GL+ +A + ++LPQA R +P Sbjct: 83 FMSGTIALMLYTSAFIAETVRAGILSIDGGQMEGARANGLSFAQAMQYIILPQAFRVALP 142 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 L +Q++NL+KNSS+ VG DL+ G I T + +I +YL +++ ++ +M Sbjct: 143 SLGNQFINLVKNSSILAFVGGLDLMYQGNMIAANTFETFSTYIIVGILYLIITLPLSYYM 202 Query: 386 NRLNAKI 392 L K+ Sbjct: 203 QHLERKL 209 Score = 38.1 bits (87), Expect = 2.5, Method: Compositional matrix adjust. Identities = 20/58 (34%), Positives = 32/58 (55%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 GF T + ++ + I+GT ++ K V + VYV+VFRNIP L++ FF + Sbjct: 14 GFGYTLLSSLIALVGSMILGTAFAIMQIVPKKWVRKVGNVYVQVFRNIPLLIITFFFF 71 >gi|21223626|ref|NP_629405.1| permease [Streptomyces coelicolor A3(2)] gi|256785263|ref|ZP_05523694.1| permease [Streptomyces lividans TK24] gi|289769154|ref|ZP_06528532.1| ABC-type amino acid transport system, permease [Streptomyces lividans TK24] gi|9968709|emb|CAC05960.1| permease [Streptomyces coelicolor A3(2)] gi|289699353|gb|EFD66782.1| ABC-type amino acid transport system, permease [Streptomyces lividans TK24] Length = 316 Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 74/225 (32%), Positives = 116/225 (51%), Gaps = 21/225 (9%) Query: 158 IPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIV--LSLFATRLSRHFHEKT 215 IPD+ F ++R L+ M I V + ++G+V + L RLS++ Sbjct: 61 IPDY--------FFDDRVLT----GMGKTLLITVLAMLIGVVGGILLAVMRLSKN---PV 105 Query: 216 GKALPLLYISTFLIFGLPTLVLIALKYQLH--FDKPVLGQFNFIGGSTVSPEFMSLYIAL 273 ++ YI F G P LV + + + L F+ LG F S F++ + L Sbjct: 106 TSSIAWFYIWFFR--GTPVLVQLVVWFNLGLVFEYINLGPFYRDEWSDFMTPFLTALLGL 163 Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333 AA++AEI R+GL+AV GQ EAA ALG++H K R +++PQAMR I+PP ++ +N Sbjct: 164 GLNEAAYMAEICRAGLLAVDEGQTEAAHALGMSHTKTLRRIVVPQAMRVIVPPTGNEVIN 223 Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378 +LK +SL V +A+L V I +G E++ + YL L+ Sbjct: 224 MLKTTSLVSVVQYAELFRVAQDIGQTSGAPAEMLFLAAAWYLLLT 268 >gi|329118127|ref|ZP_08246839.1| amino acid ABC superfamily ATP binding cassette transporter, permease protein [Neisseria bacilliformis ATCC BAA-1200] gi|327465787|gb|EGF12060.1| amino acid ABC superfamily ATP binding cassette transporter, permease protein [Neisseria bacilliformis ATCC BAA-1200] Length = 249 Score = 94.0 bits (232), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 59/189 (31%), Positives = 105/189 (55%), Gaps = 9/189 (4%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY------ 270 + L LLY++ F G P V I + Y + + ++ T + E Y Sbjct: 63 RNLSLLYVTVFR--GTPLFVQIFIWYFVWLPALIHPADGWLVSGTAAVELRRNYGALIAG 120 Query: 271 -IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329 +AL+ + A+I EI R+G+ ++ +GQMEAA +LG+T+ +A R V+LPQA+R ++PPL + Sbjct: 121 VLALTANSGAYITEIFRAGIQSIDKGQMEAARSLGMTYTQAMRFVILPQAVRRMLPPLAN 180 Query: 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 +++ LLK+SSL A+ A+L V TI + E + IYL++++ ++ + L Sbjct: 181 EFITLLKDSSLLSAIAVAELAYVQRTISGRYTVYEEPLYAIALIYLAMTLCLSWLFSSLE 240 Query: 390 AKIALKEKK 398 + +L+ + Sbjct: 241 KRYSLQRHR 249 >gi|296103388|ref|YP_003613534.1| glutamate/aspartate transport system permease protein [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295057847|gb|ADF62585.1| glutamate/aspartate transport system permease protein [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 246 Score = 94.0 bits (232), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 49/129 (37%), Positives = 78/129 (60%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+S + L +TAA + E VR+ + ++PRGQ A +A+GLT + R VLLP A R I+P Sbjct: 111 FVSSMMCLGLFTAARVCEQVRAAIQSLPRGQKNAGLAMGLTLPQTYRYVLLPNAYRVIVP 170 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 P+TS+ +NL+KNS++A +G D+ + G +++ + A E Y+ ++ I L M Sbjct: 171 PMTSEMMNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAWESFTAITLAYVLINAFIMLVM 230 Query: 386 NRLNAKIAL 394 N + KI L Sbjct: 231 NLVERKIRL 239 Score = 44.3 bits (103), Expect = 0.033, Method: Compositional matrix adjust. Identities = 39/131 (29%), Positives = 62/131 (47%), Gaps = 19/131 (14%) Query: 81 SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140 +++Y + GF T L+ + I A ++G+L G R N+ ++ I +YVE+FRN+P Sbjct: 17 GNTTYLGWLWSGFQVTVALSITAWIIAFLVGSLFGILRTVPNRFLSSIGTLYVELFRNVP 76 Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200 +V F Y V +LP N G+ F + +D N + FV S + L Sbjct: 77 LIVQFFTWYLVVPELLP--------------ENIGMWFKS-ELDPNVQFFVSSM---MCL 118 Query: 201 SLF-ATRLSRH 210 LF A R+ Sbjct: 119 GLFTAARVCEQ 129 >gi|271499711|ref|YP_003332736.1| polar amino acid ABC transporter inner membrane subunit [Dickeya dadantii Ech586] gi|270343266|gb|ACZ76031.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya dadantii Ech586] Length = 246 Score = 94.0 bits (232), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 50/129 (38%), Positives = 77/129 (59%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+S L +TAA + E VR+G+ ++PRGQ A +A+GLT + R VLLP A R I+P Sbjct: 111 FLSSMFCLGMFTAARVCEQVRAGIQSLPRGQKAAGLAIGLTLAQTYRYVLLPNAYRVIVP 170 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PLTS+ LNL+KNS++A +G D+ + G +++ + A E Y+ ++ +I L M Sbjct: 171 PLTSEMLNLVKNSAIASTIGLMDMAAQAGKLLDYSAHAYESFSAITLAYVGINAIIMLLM 230 Query: 386 NRLNAKIAL 394 + K L Sbjct: 231 QIVERKTRL 239 Score = 41.2 bits (95), Expect = 0.32, Method: Compositional matrix adjust. Identities = 34/119 (28%), Positives = 57/119 (47%), Gaps = 16/119 (13%) Query: 81 SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140 +++Y I+ G T L+ + A ++G+L+G R ++L++ I YVE+FRN+P Sbjct: 17 GNTTYLGWIISGLQVTVSLSLCAWVIAFLLGSLLGILRTVPHRLLSGIGTCYVEMFRNVP 76 Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFS-FVLGI 198 +V F Y V +LP GM+ +D N + F+ S F LG+ Sbjct: 77 LIVQFFSWYLVVPELLPT-------KLGMWFKAE--------LDPNIQFFLSSMFCLGM 120 >gi|242238548|ref|YP_002986729.1| polar amino acid ABC transporter inner membrane subunit [Dickeya dadantii Ech703] gi|242130605|gb|ACS84907.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya dadantii Ech703] Length = 246 Score = 94.0 bits (232), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 51/129 (39%), Positives = 78/129 (60%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+S + L +TAA + E VR+G+ ++PRGQ A +ALGLT + R VLLP A R +IP Sbjct: 111 FVSSMLCLGMFTAARVCEQVRAGIQSLPRGQRAAGLALGLTLPQTYRHVLLPNAYRVVIP 170 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PLTS+ LNL+KNS++A +G D+ + G +++ + A E Y+ ++ +I L M Sbjct: 171 PLTSEMLNLVKNSAIASTIGLMDMAAQAGKLLDYSAHAYESFSAITLAYIGVNAIIMLIM 230 Query: 386 NRLNAKIAL 394 + K L Sbjct: 231 QIVERKTRL 239 Score = 42.7 bits (99), Expect = 0.098, Method: Compositional matrix adjust. Identities = 26/77 (33%), Positives = 43/77 (55%) Query: 81 SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140 +++Y ++ G T L+ I A ++G+L+G R ++L+A I YVE+FRN+P Sbjct: 17 GNTTYLGWLISGLQVTVALSICAWIIAFLLGSLLGIMRTVPHRLIAGIGTCYVELFRNVP 76 Query: 141 PLVVIFFLYKSVLSVLP 157 +V F Y V +LP Sbjct: 77 LIVQFFSWYLVVPELLP 93 >gi|308186030|ref|YP_003930161.1| glutamate/aspartate transport system permease protein gltJ [Pantoea vagans C9-1] gi|308056540|gb|ADO08712.1| Glutamate/aspartate transport system permease protein gltJ [Pantoea vagans C9-1] Length = 246 Score = 94.0 bits (232), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 48/129 (37%), Positives = 80/129 (62%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+S I L +TAA + E VR+ + ++P GQ A +A+GLT + R VLLP A R I+P Sbjct: 111 FLSSMICLGLFTAARVCEQVRAAIQSLPAGQKNAGLAMGLTLPQTYRYVLLPNAYRVIVP 170 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 P+TS+ LNL+KNS++A +G D+ + G +++ + A E Y++++++I L M Sbjct: 171 PMTSEMLNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAYESFTAITLAYVAINLVIMLLM 230 Query: 386 NRLNAKIAL 394 + + K+ L Sbjct: 231 SLVERKVRL 239 Score = 40.8 bits (94), Expect = 0.36, Method: Compositional matrix adjust. Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 5/85 (5%) Query: 69 GFEIDQGI----VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKL 124 G + + GI P+ +++Y + GF T ++ I A +G+ G R N+L Sbjct: 2 GIDWNWGIFLEQAPF-GNTTYLGWLWSGFQVTIAVSCCAWIIAFCVGSFFGILRTVPNRL 60 Query: 125 VAWICRVYVEVFRNIPPLVVIFFLY 149 ++ I YVE+FRNIP +V FF Y Sbjct: 61 LSTIGTCYVELFRNIPLIVQFFFWY 85 >gi|238854964|ref|ZP_04645294.1| glutamine ABC transporter permease component [Lactobacillus jensenii 269-3] gi|260664249|ref|ZP_05865102.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Lactobacillus jensenii SJ-7A-US] gi|282931675|ref|ZP_06337168.1| putative glutamine transport system permease protein GlnP [Lactobacillus jensenii 208-1] gi|313472444|ref|ZP_07812936.1| amino acid ABC transporter, amino acid-binding/permease protein [Lactobacillus jensenii 1153] gi|238832754|gb|EEQ25061.1| glutamine ABC transporter permease component [Lactobacillus jensenii 269-3] gi|239530141|gb|EEQ69142.1| amino acid ABC transporter, amino acid-binding/permease protein [Lactobacillus jensenii 1153] gi|260562135|gb|EEX28104.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Lactobacillus jensenii SJ-7A-US] gi|281304286|gb|EFA96395.1| putative glutamine transport system permease protein GlnP [Lactobacillus jensenii 208-1] Length = 212 Score = 94.0 bits (232), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 55/124 (44%), Positives = 79/124 (63%), Gaps = 2/124 (1%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I LS YT+AFIAE +R+G+ +V GQME A + G+T+ +A R V+LPQA + IP L +Q Sbjct: 90 IGLSLYTSAFIAECIRAGINSVGEGQMEGARSNGMTYVQAMRFVILPQAFKVAIPSLGNQ 149 Query: 331 YLNLLKNSS-LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 ++NL+KNSS LA GF DL+ G I + Q + L+ YL L++ ++ +M L Sbjct: 150 FINLIKNSSVLAFVAGF-DLMYQGDVIAFSSFQTVNTYLVVGCCYLVLTLPLSYYMRYLE 208 Query: 390 AKIA 393 KIA Sbjct: 209 KKIA 212 Score = 36.2 bits (82), Expect = 9.5, Method: Compositional matrix adjust. Identities = 20/61 (32%), Positives = 32/61 (52%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L GF T ++ + + ++GT+ + NK V I Y+E+FRNIP LV+ Sbjct: 12 LLSGFGVTVMISIISLCASLVLGTVFAIMEVVPNKTVQIIAHSYIELFRNIPLLVITMIF 71 Query: 149 Y 149 Y Sbjct: 72 Y 72 >gi|170719628|ref|YP_001747316.1| polar amino acid ABC transporter inner membrane subunit [Pseudomonas putida W619] gi|169757631|gb|ACA70947.1| polar amino acid ABC transporter, inner membrane subunit [Pseudomonas putida W619] Length = 320 Score = 94.0 bits (232), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 69/209 (33%), Positives = 114/209 (54%), Gaps = 17/209 (8%) Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248 I V S LG+V+ LFA L R + T + L +Y+ L+ G P LV I + Y Sbjct: 128 ISVVSGALGLVIGLFAG-LCRLSNNPTLRDLSTVYVE--LVRGTPLLVQIFIFY------ 178 Query: 249 PVLGQFNFIGGS-TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307 FIG +S EF + AL+ +T A++AEIVR+G+ ++ +GQ EAA +LGL Sbjct: 179 ------FFIGTVLNLSREFAGV-AALALFTGAYVAEIVRAGVQSIAKGQNEAARSLGLNA 231 Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367 ++ R V+LPQA + ++PPL Q+++L+K++SL + +L G I + EI Sbjct: 232 SQSMRHVILPQAFKRVLPPLAGQFISLVKDTSLVSVIAITELTKSGREAITTSFSTFEIW 291 Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIALKE 396 +YL +++ ++ +RL ++A + Sbjct: 292 FCVAGLYLLINLPLSHLASRLERRLAQSD 320 >gi|212640609|ref|YP_002317129.1| glutamine ABC transporter permease [Anoxybacillus flavithermus WK1] gi|212562089|gb|ACJ35144.1| ABC-type glutamine transport system, permease component [Anoxybacillus flavithermus WK1] Length = 218 Score = 94.0 bits (232), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 49/121 (40%), Positives = 81/121 (66%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I+LS AA+IAEI R+G+ ++ RGQMEAA +LG+TH +A R ++LPQA++ +IPPL ++ Sbjct: 95 ISLSLNAAAYIAEIFRAGIQSIDRGQMEAARSLGMTHVQAMRYIILPQAIKRMIPPLGNE 154 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++ L+K+SSLA + +L+ G + Q + E L IYL L++ ++ ++RL Sbjct: 155 FVVLIKDSSLAAIIAAPELMYWGRAMQGQYYRVWEPYLTVALIYLVLTLSLSKLLHRLER 214 Query: 391 K 391 + Sbjct: 215 R 215 Score = 36.6 bits (83), Expect = 7.2, Method: Compositional matrix adjust. Identities = 23/72 (31%), Positives = 36/72 (50%) Query: 84 SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143 YA L G + T L+ G++ TI+G +G G++ N+LV YV FR P V Sbjct: 11 EYAPFFLKGVLWTIGLSLIGILFGTILGLAIGLGKMVQNRLVRLPFDWYVHFFRGTPLFV 70 Query: 144 VIFFLYKSVLSV 155 I ++ V+ + Sbjct: 71 QILLIHFGVMPM 82 >gi|77411077|ref|ZP_00787431.1| amino acid ABC transporter, amino acid-binding/permease protein [Streptococcus agalactiae CJB111] gi|77162900|gb|EAO73857.1| amino acid ABC transporter, amino acid-binding/permease protein [Streptococcus agalactiae CJB111] Length = 727 Score = 94.0 bits (232), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 54/176 (30%), Positives = 98/176 (55%), Gaps = 17/176 (9%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 + +PL+ ++ F+ +G+P L+ +Q P+ +F++ IALS Sbjct: 568 RGIPLMIVAAFIFWGIPNLIESITGHQ----SPI-------------NDFVAATIALSLN 610 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 A+IAEIVR G+ AVP GQMEA+ +LG+++ K + V+LPQA+R ++P +Q++ LK Sbjct: 611 GGAYIAEIVRGGIEAVPSGQMEASRSLGISYGKTMQKVILPQAVRLMLPNFINQFVISLK 670 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 ++++ A+G +L G II + Q+ + I +YL + ++ RL ++ Sbjct: 671 DTTIVSAIGLVELFQTGKIIIARNYQSFRMYAILAIMYLVIITLLTRLAKRLEKRL 726 >gi|326315178|ref|YP_004232850.1| polar amino acid ABC transporter inner membrane subunit [Acidovorax avenae subsp. avenae ATCC 19860] gi|323372014|gb|ADX44283.1| polar amino acid ABC transporter, inner membrane subunit [Acidovorax avenae subsp. avenae ATCC 19860] Length = 260 Score = 94.0 bits (232), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 63/157 (40%), Positives = 90/157 (57%), Gaps = 12/157 (7%) Query: 214 KTGKALPLLYISTFLIF---GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY 270 +T + PL ++S F I+ G P LV I Y F PVL + G + P+F + Sbjct: 81 RTARWTPLRWVSRFYIWVIRGTPLLVQILFVY---FALPVL-----VPGLNL-PDFAAAV 131 Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +AL A+ +E +R+GL+AVPRGQ EAA ALGL+ V+ PQA + +PPL S Sbjct: 132 VALGLNVGAYNSEAIRAGLLAVPRGQTEAARALGLSRTHVFFDVVFPQAFKISLPPLVSN 191 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367 ++ LLK+SSLA A+G +L +VG I + T Q I + Sbjct: 192 FVALLKDSSLAYAIGVVELTNVGNRIQSATFQPIATL 228 >gi|270293188|ref|ZP_06199399.1| amino acid ABC transporter, permease protein [Streptococcus sp. M143] gi|270279167|gb|EFA25013.1| amino acid ABC transporter, permease protein [Streptococcus sp. M143] Length = 225 Score = 94.0 bits (232), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 66/202 (32%), Positives = 108/202 (53%), Gaps = 14/202 (6%) Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252 SF+L IVL +F LS H+ + L +++ + P LV + + + P++ Sbjct: 31 SFILAIVLGIFFGVLSTSKHQIL-RILARIFVEFYQ--NTPLLVQFVIVF---YGLPLIS 84 Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312 + + + P + + + + Y A+IAE++RSG+ ++P GQMEAA++ G T+ A R Sbjct: 85 EH-----TIMIPIYWTAVLCVGLYHGAYIAEVIRSGIQSIPSGQMEAALSQGFTYISAMR 139 Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372 L++LPQA R I+PPLT+Q +NL+KN+S + DL+ V + G I L Sbjct: 140 LIILPQAFRIILPPLTNQIVNLIKNTSTVAIISGVDLMFVTKSWSALNGNYIPAFLGAAL 199 Query: 373 IYLSLSIMIALF---MNRLNAK 391 +Y +L +A F M R N K Sbjct: 200 LYFALCFPVAQFGRKMERANKK 221 >gi|24379910|ref|NP_721865.1| putative amino acid ABC transporter, permease protein [Streptococcus mutans UA159] gi|24377889|gb|AAN59171.1|AE014984_6 putative amino acid ABC transporter, permease protein [Streptococcus mutans UA159] Length = 234 Score = 94.0 bits (232), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 50/149 (33%), Positives = 85/149 (57%), Gaps = 8/149 (5%) Query: 247 DKPVLGQFNFI--------GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQME 298 + P+L QF F+ G+ + F + + + Y A+IAE++RSG+ AVPRGQ E Sbjct: 75 NTPLLVQFVFVYYGLAIMTNGAVMISAFFTAVLCVGIYHGAYIAEVIRSGIEAVPRGQTE 134 Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN 358 AA++ G T+++ L++LPQA+R+I+PP+T+Q +NL+KN+S + AD++ Sbjct: 135 AALSQGFTYQETMSLIILPQAIRTILPPMTNQVVNLIKNTSTVAIISGADIMFTAKAWAY 194 Query: 359 QTGQAIEIILIWMFIYLSLSIMIALFMNR 387 +T I F+Y + +A + R Sbjct: 195 ETTNYIPAFAGAAFLYFIMCFPLATWARR 223 Score = 42.0 bits (97), Expect = 0.15, Method: Compositional matrix adjust. Identities = 24/60 (40%), Positives = 35/60 (58%) Query: 90 LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 L GF T ++ ++ + I+G + GA S KL+ I RVYVE+F+N P LV F+Y Sbjct: 27 LKGFFYTLEMSVFALLLSLILGVIFGAMSSSKTKLLKGIARVYVEIFQNTPLLVQFVFVY 86 >gi|22537609|ref|NP_688460.1| glutamine ABC transporter, glutamine-binding protein/permease protein [Streptococcus agalactiae 2603V/R] gi|25011575|ref|NP_735970.1| glutamine ABC transporter permease and substrate binding protein [Streptococcus agalactiae NEM316] gi|76797646|ref|ZP_00779916.1| glutamine ABC transporter permease and substrate binding protein [Streptococcus agalactiae 18RS21] gi|77405223|ref|ZP_00782321.1| amino acid ABC transporter, amino acid-binding/permease protein [Streptococcus agalactiae H36B] gi|77414125|ref|ZP_00790292.1| amino acid ABC transporter, amino acid-binding/permease protein [Streptococcus agalactiae 515] gi|22534494|gb|AAN00333.1|AE014259_4 glutamine ABC transporter, glutamine-binding protein/permease protein [Streptococcus agalactiae 2603V/R] gi|24413114|emb|CAD47192.1| glutamine ABC transporter permease and substrate binding protein [Streptococcus agalactiae NEM316] gi|76587007|gb|EAO63495.1| glutamine ABC transporter permease and substrate binding protein [Streptococcus agalactiae 18RS21] gi|77159836|gb|EAO70980.1| amino acid ABC transporter, amino acid-binding/permease protein [Streptococcus agalactiae 515] gi|77176225|gb|EAO78996.1| amino acid ABC transporter, amino acid-binding/permease protein [Streptococcus agalactiae H36B] Length = 727 Score = 94.0 bits (232), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 54/176 (30%), Positives = 98/176 (55%), Gaps = 17/176 (9%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 + +PL+ ++ F+ +G+P L+ +Q P+ +F++ IALS Sbjct: 568 RGIPLMIVAAFIFWGIPNLIESITGHQ----SPI-------------NDFVAATIALSLN 610 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 A+IAEIVR G+ AVP GQMEA+ +LG+++ K + V+LPQA+R ++P +Q++ LK Sbjct: 611 GGAYIAEIVRGGIEAVPSGQMEASRSLGISYGKTMQKVILPQAVRLMLPNFINQFVISLK 670 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 ++++ A+G +L G II + Q+ + I +YL + ++ RL ++ Sbjct: 671 DTTIVSAIGLVELFQTGKIIIARNYQSFRMYAILAIMYLVIITLLTRLAKRLEKRL 726 >gi|290473277|ref|YP_003466143.1| putative glutamate/aspartate ABC transporter membrane protein [Xenorhabdus bovienii SS-2004] gi|289172576|emb|CBJ79345.1| putative glutamate/aspartate transport protein (ABC superfamily, membrane) [Xenorhabdus bovienii SS-2004] Length = 245 Score = 94.0 bits (232), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 46/101 (45%), Positives = 69/101 (68%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 EF++ +I L+ Y+A F+AE +R+G+ + RGQ AA ALGLT +A R V+LPQA++ + Sbjct: 113 EFLAGFIGLTLYSAPFVAEELRAGIQGIGRGQKYAAHALGLTDWQAMRYVVLPQALKIAM 172 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365 PPL QY+N++KNSSL +A+G A+L + Q+ Q E Sbjct: 173 PPLLGQYMNIVKNSSLTMAIGVAELSYASRQVETQSLQTFE 213 Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 29/85 (34%), Positives = 45/85 (52%) Query: 73 DQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVY 132 +Q I + Y + GF+ T WL+ +I +T++G ++ A R S K + W+ Y Sbjct: 3 EQFITEHLLAPEYLRWLWQGFLITLWLSVCTIISSTLLGFMITAARDSQIKPLRWLVTAY 62 Query: 133 VEVFRNIPPLVVIFFLYKSVLSVLP 157 VFRN P LV +FF Y + +LP Sbjct: 63 TTVFRNTPLLVQLFFWYFASGQILP 87 >gi|319745422|gb|EFV97729.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus agalactiae ATCC 13813] Length = 727 Score = 94.0 bits (232), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 54/176 (30%), Positives = 98/176 (55%), Gaps = 17/176 (9%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 + +PL+ ++ F+ +G+P L+ +Q P+ +F++ IALS Sbjct: 568 RGIPLMIVAAFIFWGIPNLIESITGHQ----SPI-------------NDFVAATIALSLN 610 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 A+IAEIVR G+ AVP GQMEA+ +LG+++ K + V+LPQA+R ++P +Q++ LK Sbjct: 611 GGAYIAEIVRGGIEAVPSGQMEASRSLGISYGKTMQKVILPQAVRLMLPNFINQFVISLK 670 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 ++++ A+G +L G II + Q+ + I +YL + ++ RL ++ Sbjct: 671 DTTIVSAIGLVELFQTGKIIIARNYQSFRMYAILAIMYLVIITLLTRLAKRLEKRL 726 >gi|76788581|ref|YP_330104.1| polar amino acid ABC transporter permease/substrate-binding protein [Streptococcus agalactiae A909] gi|76563638|gb|ABA46222.1| polar amino acid uptake (PAAT) family ABC transporter, substrate-binding/permease protein [Streptococcus agalactiae A909] Length = 727 Score = 94.0 bits (232), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 54/176 (30%), Positives = 98/176 (55%), Gaps = 17/176 (9%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 + +PL+ ++ F+ +G+P L+ +Q P+ +F++ IALS Sbjct: 568 RGIPLMIVAAFIFWGIPNLIESITGHQ----SPI-------------NDFVAATIALSLN 610 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 A+IAEIVR G+ AVP GQMEA+ +LG+++ K + V+LPQA+R ++P +Q++ LK Sbjct: 611 GGAYIAEIVRGGIEAVPSGQMEASRSLGISYGKTMQKVILPQAVRLMLPNFINQFVISLK 670 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 ++++ A+G +L G II + Q+ + I +YL + ++ RL ++ Sbjct: 671 DTTIVSAIGLVELFQTGKIIIARNYQSFRMYAILAIMYLVIITLLTRLAKRLEKRL 726 >gi|14211227|gb|AAK57382.1|AF372619_1 GlnP [Streptococcus agalactiae COH1] Length = 727 Score = 94.0 bits (232), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 54/176 (30%), Positives = 98/176 (55%), Gaps = 17/176 (9%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 + +PL+ ++ F+ +G+P L+ +Q P+ +F++ IALS Sbjct: 568 RGIPLMIVAAFIFWGIPNLIESITGHQ----SPI-------------NDFVAATIALSLN 610 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 A+IAEIVR G+ AVP GQMEA+ +LG+++ K + V+LPQA+R ++P +Q++ LK Sbjct: 611 GGAYIAEIVRGGIEAVPSGQMEASRSLGISYGKTMQKVILPQAVRLMLPNFINQFVISLK 670 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 ++++ A+G +L G II + Q+ + I +YL + ++ RL ++ Sbjct: 671 DTTIVSAIGLVELFQTGKIIIARNYQSFRMYAILAIMYLVIITLLTRLAKRLEKRL 726 >gi|311280449|ref|YP_003942680.1| polar amino acid ABC transporter, inner membrane subunit [Enterobacter cloacae SCF1] gi|308749644|gb|ADO49396.1| polar amino acid ABC transporter, inner membrane subunit [Enterobacter cloacae SCF1] Length = 246 Score = 94.0 bits (232), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 48/129 (37%), Positives = 79/129 (61%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+S + L +TAA + E VR+ + ++PRGQ A +A+GLT + R VLLP A R I+P Sbjct: 111 FVSSMLCLGLFTAARVCEQVRAAIQSLPRGQKNAGLAMGLTLPQTYRYVLLPNAYRVIVP 170 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 P+TS+ +NL+KNS++A +G D+ + G +++ + A E Y+ ++ +I L M Sbjct: 171 PMTSEMMNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAWESFTAITLAYVLINAVIMLVM 230 Query: 386 NRLNAKIAL 394 N + K+ L Sbjct: 231 NLVERKVRL 239 Score = 39.7 bits (91), Expect = 0.91, Method: Compositional matrix adjust. Identities = 37/131 (28%), Positives = 61/131 (46%), Gaps = 19/131 (14%) Query: 81 SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140 +++Y + GF T L+ + I A I+G+L G R ++ ++ + +YVE+FRN+P Sbjct: 17 GNTTYLGWLWSGFQVTVALSITAWIIAFIVGSLFGILRTVPHRALSSLGTLYVELFRNVP 76 Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200 +V F Y + +LP N G F + +D N + FV S + L Sbjct: 77 LIVQFFTWYLVIPELLP--------------ENIGTWFKS-ELDPNIQFFVSSM---LCL 118 Query: 201 SLF-ATRLSRH 210 LF A R+ Sbjct: 119 GLFTAARVCEQ 129 >gi|213022683|ref|ZP_03337130.1| glutamate/aspartate transport system permease protein GltJ [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 235 Score = 94.0 bits (232), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 44/100 (44%), Positives = 68/100 (68%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+S I L +TAA + E VR+ + ++PRGQ AA+A+GLT +A R VLLP A R I+P Sbjct: 111 FLSSMICLGLFTAARVCEQVRAAIQSLPRGQKNAALAMGLTLPQAYRYVLLPNAYRVIVP 170 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365 P+TS+ +NL+KNS++A +G D+ + G +++ + A E Sbjct: 171 PMTSEMMNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAWE 210 Score = 40.4 bits (93), Expect = 0.45, Method: Compositional matrix adjust. Identities = 24/76 (31%), Positives = 43/76 (56%) Query: 82 DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141 +++Y + GF T L+ + I A ++G++ G R N+ ++ + +YVE+FRN+P Sbjct: 18 NTTYLGWLWSGFQVTVALSITAWIIAFLVGSIFGILRTVPNRFLSGLGTLYVELFRNVPL 77 Query: 142 LVVIFFLYKSVLSVLP 157 +V F Y V +LP Sbjct: 78 IVQFFTWYLVVPELLP 93 >gi|269963235|ref|ZP_06177569.1| polar amino acid ABC transporter, permease protein [Vibrio harveyi 1DA3] gi|269832040|gb|EEZ86165.1| polar amino acid ABC transporter, permease protein [Vibrio harveyi 1DA3] Length = 265 Score = 94.0 bits (232), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 73/241 (30%), Positives = 120/241 (49%), Gaps = 19/241 (7%) Query: 158 IPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGK 217 +PD+ G + + +T+ +A F+ V+G F T L R + K G Sbjct: 43 VPDYIAFYEDGEWWPAELVDGLIVTLKISAISLFFTLVIG-----FVTALLRLSNSKVGN 97 Query: 218 ALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT 277 A+ Y+ +I P LV I L Y + PV+G F + +ALS + Sbjct: 98 AIGTTYVE--MIRNTPLLVQIYLLYFVF--GPVIGL----------DRFSTAVLALSLFQ 143 Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 A+ AEI R+GL ++P+GQ EAA LGL+ A + V+LPQ ++ +PPLT++ ++L+KN Sbjct: 144 GAYTAEIFRAGLNSIPKGQFEAAKTLGLSPFFAYKDVILPQVLQRTLPPLTNEVVSLIKN 203 Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 SS+ + DL + I+++T EI IYL+L++ ++ L K+ + Sbjct: 204 SSIVSVMAIFDLTTEARNIVSETAMPFEIWFTVAAIYLALTLSLSGLSAWLEHKLGASWR 263 Query: 398 K 398 K Sbjct: 264 K 264 >gi|187925334|ref|YP_001896976.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia phytofirmans PsJN] gi|187716528|gb|ACD17752.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia phytofirmans PsJN] Length = 246 Score = 94.0 bits (232), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 50/129 (38%), Positives = 77/129 (59%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F S I L +TAA + E VRSG+ A+P+GQ A +A+G T + R VLLP A R I+P Sbjct: 111 FSSSIICLGLFTAARVCEQVRSGINALPKGQRAAGLAMGFTQWQTYRYVLLPVAYRIIVP 170 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PLTS++LN+ KNS++A +G DL + +++ T Q E + Y+ +++++ M Sbjct: 171 PLTSEFLNIFKNSAVASTIGLLDLSAQARQLVDYTSQTYESFIAVTIAYMLINLVVMQLM 230 Query: 386 NRLNAKIAL 394 + AK L Sbjct: 231 RWVEAKTRL 239 Score = 43.9 bits (102), Expect = 0.051, Method: Compositional matrix adjust. Identities = 27/77 (35%), Positives = 41/77 (53%) Query: 81 SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140 ++Y +L GF T ++ S + A I+G+L G R NK + I +YV +FRNIP Sbjct: 18 EPTTYLGWLLSGFWVTITVSLSAWVIALIVGSLFGVLRTVPNKWASGIGTLYVAIFRNIP 77 Query: 141 PLVVIFFLYKSVLSVLP 157 +V F Y + +LP Sbjct: 78 LIVQFFIWYLVIPELLP 94 >gi|290580110|ref|YP_003484502.1| putative amino acid ABC transporter permease [Streptococcus mutans NN2025] gi|254997009|dbj|BAH87610.1| putative amino acid ABC transporter permease protein [Streptococcus mutans NN2025] Length = 240 Score = 94.0 bits (232), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 50/149 (33%), Positives = 85/149 (57%), Gaps = 8/149 (5%) Query: 247 DKPVLGQFNFI--------GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQME 298 + P+L QF F+ G+ + F + + + Y A+IAE++RSG+ AVPRGQ E Sbjct: 81 NTPLLVQFVFVYYGLAIMTNGAVMISAFFTAVLCVGIYHGAYIAEVIRSGIEAVPRGQTE 140 Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN 358 AA++ G T+++ L++LPQA+R+I+PP+T+Q +NL+KN+S + AD++ Sbjct: 141 AALSQGFTYQETMSLIILPQAIRTILPPMTNQVVNLIKNTSTVAIISGADIMFTAKAWAY 200 Query: 359 QTGQAIEIILIWMFIYLSLSIMIALFMNR 387 +T I F+Y + +A + R Sbjct: 201 ETTNYIPAFAGAAFLYFIMCFPLATWARR 229 Score = 42.4 bits (98), Expect = 0.14, Method: Compositional matrix adjust. Identities = 24/60 (40%), Positives = 35/60 (58%) Query: 90 LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 L GF T ++ ++ + I+G + GA S KL+ I RVYVE+F+N P LV F+Y Sbjct: 33 LKGFFYTLEMSVFALLLSLILGVIFGAMSSSKTKLLKGIARVYVEIFQNTPLLVQFVFVY 92 >gi|253687584|ref|YP_003016774.1| polar amino acid ABC transporter, inner membrane subunit [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251754162|gb|ACT12238.1| polar amino acid ABC transporter, inner membrane subunit [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 224 Score = 94.0 bits (232), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 46/127 (36%), Positives = 80/127 (62%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 +S +A S + AA+ +EI+R+G++++ RGQ AA+ALG+TH ++ +LV+LPQA R+++ Sbjct: 96 RLISAMVAFSLFEAAYYSEIIRAGILSISRGQSSAALALGMTHWQSMKLVILPQAFRAMV 155 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 P L +Q + L +++SL + AD TI + G +E+IL FIY SI ++ Sbjct: 156 PLLLTQGIVLFQDTSLVYVLSLADFFRTASTIGERDGTQVEMILFAGFIYFIFSISASML 215 Query: 385 MNRLNAK 391 ++ L + Sbjct: 216 VSYLKKR 222 Score = 40.0 bits (92), Expect = 0.63, Method: Compositional matrix adjust. Identities = 20/65 (30%), Positives = 39/65 (60%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151 G V T + + ++ + GT++ RLS K ++W ++YV +FR++P ++V+ + Y Sbjct: 19 GMVVTLKITLTAVVFGIVWGTILAVMRLSPIKPISWFAKLYVNLFRSVPLVMVLLWFYLV 78 Query: 152 VLSVL 156 V S+L Sbjct: 79 VPSLL 83 >gi|330815542|ref|YP_004359247.1| hypothetical protein bgla_1g05980 [Burkholderia gladioli BSR3] gi|327367935|gb|AEA59291.1| hypothetical protein bgla_1g05980 [Burkholderia gladioli BSR3] Length = 246 Score = 94.0 bits (232), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 48/129 (37%), Positives = 77/129 (59%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + + L +T A + E VRSG+ A+P+GQ A +A+G T + R VLLP A R I+P Sbjct: 111 FTASIVCLGLFTGARVCEQVRSGINALPKGQRAAGLAMGFTEWQTYRYVLLPVAYRIIVP 170 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PLTS++LN+ KNS++A +G DL + +++ T Q E + Y+ +++++ FM Sbjct: 171 PLTSEFLNIFKNSAVASTIGLLDLSAQARQLVDYTAQTYESFIAVTLAYVIINLVVMAFM 230 Query: 386 NRLNAKIAL 394 + AK L Sbjct: 231 RWVEAKTRL 239 Score = 40.0 bits (92), Expect = 0.65, Method: Compositional matrix adjust. Identities = 25/77 (32%), Positives = 42/77 (54%) Query: 81 SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140 ++Y +L GF T ++ + + A I+G+L G R ++ ++ I +YV +FRNIP Sbjct: 18 EPTTYLGWLLSGFWVTIKVSLAAWVIALIVGSLFGVLRTVQDRRLSAIGTLYVSIFRNIP 77 Query: 141 PLVVIFFLYKSVLSVLP 157 +V F Y V +LP Sbjct: 78 LIVQFFVWYLVVPELLP 94 >gi|294637496|ref|ZP_06715782.1| glutamate/aspartate ABC transporter, permease protein [Edwardsiella tarda ATCC 23685] gi|291089328|gb|EFE21889.1| glutamate/aspartate ABC transporter, permease protein [Edwardsiella tarda ATCC 23685] Length = 246 Score = 94.0 bits (232), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 49/129 (37%), Positives = 79/129 (61%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+S + L +TAA + E VR+ + A+PRGQ A +ALG T + R VLLP A R I+P Sbjct: 111 FVSSLLCLGLFTAARVCEQVRAAINALPRGQKNAGLALGFTLAQTYRYVLLPNAYRVIVP 170 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PLTS+ LNL+KNS++A +G D+ + G +++ + A E Y++++ ++ L M Sbjct: 171 PLTSEMLNLVKNSAIASTIGLLDMAAQAGKLLDYSAHAYESFTAITLAYIAINALLMLGM 230 Query: 386 NRLNAKIAL 394 + L ++ L Sbjct: 231 HLLERRLQL 239 >gi|315612723|ref|ZP_07887634.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis ATCC 49296] gi|315314833|gb|EFU62874.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis ATCC 49296] Length = 225 Score = 94.0 bits (232), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 74/238 (31%), Positives = 116/238 (48%), Gaps = 43/238 (18%) Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFAT----------RLSRHFHEKTG 216 FG F N G F TL + + F+ + VLGI+ + +T R+ F++ T Sbjct: 14 FGQFFN--GFLF-TLALAIGS--FILAMVLGIIFGVLSTSKHQILRILARIFVEFYQNT- 67 Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 PLL + +GLP + D ++ P + + + + Y Sbjct: 68 ---PLLVQFVIVFYGLPLIS----------DHTIM-----------IPIYWTAVLCVGLY 103 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 A+IAE++RSG+ ++P GQMEAA++ G T+ A RL++LPQA R I+PPLT+Q +NL+K Sbjct: 104 HGAYIAEVIRSGIQSIPSGQMEAALSQGFTYISAMRLIILPQAFRIILPPLTNQIVNLIK 163 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF---MNRLNAK 391 N+S + DL+ V + G I L +Y +L +A F M + N K Sbjct: 164 NTSTVAIISGVDLMFVTKSWSALNGNYIPAFLGAALLYFALCFPVAQFGRKMEQANKK 221 Score = 38.1 bits (87), Expect = 2.4, Method: Compositional matrix adjust. Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 5/76 (6%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151 GF+ T LA I A ++G + G S ++++ + R++VE ++N P LV ++ Sbjct: 20 GFLFTLALAIGSFILAMVLGIIFGVLSTSKHQILRILARIFVEFYQNTPLLVQFVIVFYG 79 Query: 152 VLSVLP-IPDHSIVLP 166 LP I DH+I++P Sbjct: 80 ----LPLISDHTIMIP 91 >gi|328956870|ref|YP_004374256.1| glutamine ABC transporter permease protein GlnM [Carnobacterium sp. 17-4] gi|328673194|gb|AEB29240.1| glutamine ABC transporter permease protein GlnM [Carnobacterium sp. 17-4] Length = 215 Score = 94.0 bits (232), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 43/90 (47%), Positives = 64/90 (71%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I L+ YT+AFIAE VR+G++ VP+GQ EA ++ GLT + R ++LPQA + +IPPL +Q Sbjct: 90 IGLTIYTSAFIAETVRAGIMGVPKGQTEAGLSTGLTQNETMRYIILPQAFKIVIPPLGNQ 149 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 ++NL+KNSS+ V DL+ G I ++T Sbjct: 150 FINLVKNSSVLAMVTGLDLMYQGDLIASET 179 Score = 49.7 bits (117), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 23/67 (34%), Positives = 40/67 (59%) Query: 83 SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142 ++Y ++ GF+NT + + + + IIGTL+ +LS K + + YVE F+NIP L Sbjct: 6 TTYQDVLIDGFLNTLYSSIIALFFSLIIGTLMAISQLSKKKWLKRLANAYVEFFKNIPLL 65 Query: 143 VVIFFLY 149 +++ F Y Sbjct: 66 IIVMFFY 72 >gi|251790534|ref|YP_003005255.1| polar amino acid ABC transporter inner membrane subunit [Dickeya zeae Ech1591] gi|247539155|gb|ACT07776.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya zeae Ech1591] Length = 246 Score = 93.6 bits (231), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 50/129 (38%), Positives = 77/129 (59%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+S L +TAA + E VR+G+ ++PRGQ A +A+GLT + R VLLP A R I+P Sbjct: 111 FLSSMFCLGMFTAARVCEQVRAGIQSLPRGQKAAGLAIGLTLPQTYRYVLLPNAYRVIVP 170 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PLTS+ LNL+KNS++A +G D+ + G +++ + A E Y+ ++ +I L M Sbjct: 171 PLTSEMLNLVKNSAIASTIGLMDMAAQAGKLLDYSAHAYESFSAITLAYVGINAIIMLLM 230 Query: 386 NRLNAKIAL 394 + K L Sbjct: 231 QIVERKTRL 239 Score = 41.2 bits (95), Expect = 0.33, Method: Compositional matrix adjust. Identities = 25/77 (32%), Positives = 43/77 (55%) Query: 81 SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140 +++Y I+ G T L+ I A ++G+L+G R ++L++ I YVE+FRN+P Sbjct: 17 GNTTYLGWIISGLQVTVSLSLCAWIIAFLLGSLLGILRTVPHRLLSGIGTCYVEMFRNVP 76 Query: 141 PLVVIFFLYKSVLSVLP 157 +V F Y + +LP Sbjct: 77 LIVQFFSWYLVIPELLP 93 >gi|313892004|ref|ZP_07825605.1| glutamine ABC transporter, permease protein GlnP [Dialister microaerophilus UPII 345-E] gi|329121000|ref|ZP_08249631.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Dialister micraerophilus DSM 19965] gi|313119647|gb|EFR42838.1| glutamine ABC transporter, permease protein GlnP [Dialister microaerophilus UPII 345-E] gi|327471162|gb|EGF16616.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Dialister micraerophilus DSM 19965] Length = 213 Score = 93.6 bits (231), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 60/163 (36%), Positives = 96/163 (58%), Gaps = 10/163 (6%) Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288 I G P LV I L Y F P+ I G V P F++ A + A+++EI+R+G Sbjct: 60 IRGTPLLVQIFLIY---FALPM------ISGHRVDP-FLAAVTACGINSGAYVSEIIRAG 109 Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348 + ++ GQMEA +LGLT + ++LPQA+R+I+PPL ++++ +LK+SSL +GF + Sbjct: 110 IQSIDIGQMEAGRSLGLTWWQTMYHIILPQALRNILPPLGNEFIAMLKDSSLVSVIGFEE 169 Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 L G II QT + EI L F+YL +++ I+ ++ L + Sbjct: 170 LTRRGQLIIAQTYGSFEIWLTVAFLYLVMTLAISRLVSFLERR 212 >gi|156977165|ref|YP_001448071.1| ABC transporter ATP-binding/permease protein [Vibrio harveyi ATCC BAA-1116] gi|156528759|gb|ABU73844.1| hypothetical protein VIBHAR_05951 [Vibrio harveyi ATCC BAA-1116] Length = 265 Score = 93.6 bits (231), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 74/241 (30%), Positives = 123/241 (51%), Gaps = 19/241 (7%) Query: 158 IPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGK 217 +PD+ G + + +T+ +A F+ V+G+V +L RLS + K G Sbjct: 43 VPDYIAFYEEGEWWPAELIEGLIVTLKISAISLFFTLVIGLVTALL--RLS---NSKVGN 97 Query: 218 ALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT 277 A+ Y+ LI P LV I L Y + PV+G F + +ALS + Sbjct: 98 AIGTTYVE--LIRNTPLLVQIYLLYFVF--GPVIGL----------DRFSTAVLALSLFQ 143 Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 A+ AEI R+GL ++P+GQ EA +LGL+ A + V+LPQ ++ +PPLT++ ++L+KN Sbjct: 144 GAYTAEIFRAGLNSIPKGQFEATKSLGLSPLFAYKDVILPQVLQRTLPPLTNEVVSLIKN 203 Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 SS+ + DL + I+++T EI IYL+L++ ++ L K+ + Sbjct: 204 SSIVSVMAIFDLTTEARNIVSETAMPFEIWFTVAAIYLALTLSLSGLSAWLEHKLGASWR 263 Query: 398 K 398 K Sbjct: 264 K 264 >gi|104784003|ref|YP_610501.1| amino acid ABC transporter permease [Pseudomonas entomophila L48] gi|95112990|emb|CAK17718.1| putative amino acid ABC transporter, permease protein [Pseudomonas entomophila L48] Length = 320 Score = 93.6 bits (231), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 69/208 (33%), Positives = 114/208 (54%), Gaps = 15/208 (7%) Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248 I V S LG+V+ LFA L R + T + L +Y+ L+ G P LV I + Y F Sbjct: 128 ISVISGALGLVIGLFAG-LCRLSNNPTLRDLSTVYVE--LVRGTPLLVQIFIFY--FFIG 182 Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308 VL +S EF + AL+ +T A++AEIVR+G+ ++ +GQ EAA +LGL Sbjct: 183 TVL---------NLSREFAGV-AALALFTGAYVAEIVRAGVQSIAKGQNEAARSLGLNGS 232 Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368 ++ R V+LPQA + ++PPL Q+++L+K++SL + +L G I + EI Sbjct: 233 QSMRHVILPQAFKRVLPPLAGQFISLVKDTSLVSVIAITELTKSGREAITTSFSTFEIWF 292 Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKE 396 +YL +++ ++ +RL ++A + Sbjct: 293 CVAGLYLLINLPLSHIASRLERRLAQSD 320 >gi|222081097|ref|YP_002540460.1| amino acid ABC transporter [Agrobacterium radiobacter K84] gi|221725776|gb|ACM28865.1| amino acid ABC transporter [Agrobacterium radiobacter K84] Length = 223 Score = 93.6 bits (231), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 50/140 (35%), Positives = 84/140 (60%), Gaps = 1/140 (0%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G ++ P F++ +IALS + AF AE+ R G+I++ RGQ EAA ALG+ + R ++LPQ Sbjct: 85 GVSLDP-FVAAWIALSIQSGAFFAEVFRGGIISIERGQWEAARALGMRGGRIMRRIILPQ 143 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378 A+R +IPPL + L+K +SLA + + DLV + +QT + +E ++ S+ Sbjct: 144 ALRRMIPPLMERSFELVKTTSLAATLAYGDLVYQAMVVTSQTYRPLETYTTVAVLFFSVL 203 Query: 379 IMIALFMNRLNAKIALKEKK 398 + +L M + A++A K+ Sbjct: 204 FVASLGMRAVEARLARYHKR 223 >gi|224826756|ref|ZP_03699856.1| polar amino acid ABC transporter, inner membrane subunit [Lutiella nitroferrum 2002] gi|224600976|gb|EEG07159.1| polar amino acid ABC transporter, inner membrane subunit [Lutiella nitroferrum 2002] Length = 247 Score = 93.6 bits (231), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 66/205 (32%), Positives = 106/205 (51%), Gaps = 9/205 (4%) Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK- 248 ++ + +LG VL + R KT + Y+ F +P LV + + Y L D Sbjct: 40 WIIALILGSVLGVM-----RTLPNKTASGIATAYVELFR--NVPLLVQLFVWYFLVPDLL 92 Query: 249 PVLGQFNFIGG-STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307 P Q F S + ++S+ + L +TAA + E VR+G+ A+P+GQ AA+A+G Sbjct: 93 PERAQIWFKQDLSPATSAYLSVVVCLGLFTAARVCEQVRTGVQALPKGQNYAAMAMGFQQ 152 Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367 + R VLLPQA R IIPPLTS++LN+ KNSS+A +G +L++ + E Sbjct: 153 AQIYRYVLLPQAFRIIIPPLTSEFLNIFKNSSVASLIGLMELLAQTKQTAEFSANLFEAF 212 Query: 368 LIWMFIYLSLSIMIALFMNRLNAKI 392 + IY L++ + FM + ++ Sbjct: 213 TLATVIYFVLNMSLMKFMGWVETRL 237 Score = 45.1 bits (105), Expect = 0.022, Method: Compositional matrix adjust. Identities = 25/59 (42%), Positives = 36/59 (61%) Query: 99 LAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLP 157 +A +G I A I+G+++G R NK + I YVE+FRN+P LV +F Y V +LP Sbjct: 35 VALAGWIIALILGSVLGVMRTLPNKTASGIATAYVELFRNVPLLVQLFVWYFLVPDLLP 93 >gi|156741440|ref|YP_001431569.1| polar amino acid ABC transporter inner membrane subunit [Roseiflexus castenholzii DSM 13941] gi|156232768|gb|ABU57551.1| polar amino acid ABC transporter, inner membrane subunit [Roseiflexus castenholzii DSM 13941] Length = 403 Score = 93.6 bits (231), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 70/205 (34%), Positives = 111/205 (54%), Gaps = 19/205 (9%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 V SF LG++L+L R L ++YI LI G+P I++ + P+ Sbjct: 211 VLSFPLGVLLAL-----GRQSKLPVIHWLCVIYIE--LIRGVP---FISVLFMAQLMLPL 260 Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 F+ G T+ + + ++AA++AE VR GL ++PRGQ EAA ALGL+ K Sbjct: 261 -----FLPGVTID-RVVRAMAGVIIFSAAYLAENVRGGLQSIPRGQYEAARALGLSAWKM 314 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT---GQAIEII 367 T L++LPQA+R++IP L Q++ L K++SL V VG DL+ + T++ Q G E+ Sbjct: 315 TLLIILPQALRAVIPILVGQFIALFKDTSLVVIVGLLDLMGIARTVLAQPDFLGLQAEVY 374 Query: 368 LIWMFIYLSLSIMIALFMNRLNAKI 392 F+Y +++ F RL A++ Sbjct: 375 TFVAFVYGVFCYLMSAFSQRLEAQL 399 >gi|317494653|ref|ZP_07953065.1| inner membrane binding protein [Enterobacteriaceae bacterium 9_2_54FAA] gi|316917255|gb|EFV38602.1| inner membrane binding protein [Enterobacteriaceae bacterium 9_2_54FAA] Length = 246 Score = 93.6 bits (231), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 63/192 (32%), Positives = 105/192 (54%), Gaps = 20/192 (10%) Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHF------HEKTGKALPLLYISTFLIFG--- 231 +T+ +A V S +LG++L+ SR + + PLL F FG Sbjct: 25 ITLVISACTIVLSTILGLILAALRDSSSRWLSLPVIAYSSVFRNTPLLVQLFFWYFGAGQ 84 Query: 232 -LPTLVLIALK--YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288 LP++V+ L ++ FD + +F EF++ + L+ Y+AAFI+E +R+G Sbjct: 85 LLPSVVMQWLNTPHEWMFDGWTIAWPSF--------EFLAGLVGLTLYSAAFISEEIRAG 136 Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348 + V GQ +A+ ALGL+ ++ R V+LPQA++ +PPL QY+N++KNSSL +A+G A+ Sbjct: 137 IRGVASGQKQASQALGLSLWQSMRYVVLPQAVKIALPPLLGQYMNIIKNSSLTMAIGVAE 196 Query: 349 LVSVGGTIINQT 360 L + +T Sbjct: 197 LSYASRQVETET 208 Score = 38.1 bits (87), Expect = 2.2, Method: Compositional matrix adjust. Identities = 50/198 (25%), Positives = 88/198 (44%), Gaps = 40/198 (20%) Query: 84 SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143 Y + GF+ T ++ ++ +TI+G ++ A R S+++ ++ Y VFRN P LV Sbjct: 14 QYLHWLWSGFLITLVISACTIVLSTILGLILAALRDSSSRWLSLPVIAYSSVFRNTPLLV 73 Query: 144 VIFFLYKSVLSVLPIPDHSIVL-----PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198 +FF Y +LP S+V+ P + +++P+ F F+ G+ Sbjct: 74 QLFFWYFGAGQLLP----SVVMQWLNTPHEWMFDGWTIAWPS-----------FEFLAGL 118 Query: 199 V-LSLFAT-----------RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246 V L+L++ R ++ +AL L + LP V IAL Sbjct: 119 VGLTLYSAAFISEEIRAGIRGVASGQKQASQALGLSLWQSMRYVVLPQAVKIAL------ 172 Query: 247 DKPVLGQF-NFIGGSTVS 263 P+LGQ+ N I S+++ Sbjct: 173 -PPLLGQYMNIIKNSSLT 189 >gi|297619594|ref|YP_003707699.1| polar amino acid ABC transporter, inner membrane subunit [Methanococcus voltae A3] gi|297378571|gb|ADI36726.1| polar amino acid ABC transporter, inner membrane subunit [Methanococcus voltae A3] Length = 232 Score = 93.6 bits (231), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 70/194 (36%), Positives = 111/194 (57%), Gaps = 18/194 (9%) Query: 188 KIFVFSFVLGIVLSLFAT--RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH 245 KI VFS +LGIVL +F R+S +F ++ ++ YI LI G P LV I + Y Sbjct: 36 KITVFSIILGIVLGVFVGVGRISSNFIYRSFSSV---YIE--LIRGTPMLVQIMIIY--- 87 Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305 F P LG N F++ +AL + A+I EI+++G+++V GQMEAA +LG+ Sbjct: 88 FGLPDLG-INL-------DAFLAGVLALGLNSGAYIGEIIKAGILSVHHGQMEAARSLGM 139 Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365 + +A R ++LPQA R+++P L ++++ LLK+SSL + +L+ VG + T A Sbjct: 140 NYFQAMRHIILPQAFRNVLPALGNEFIILLKDSSLLSVIAIVELLRVGDQVRGSTYNAWT 199 Query: 366 IILIWMFIYLSLSI 379 +L YL ++I Sbjct: 200 PLLGVALFYLLMTI 213 >gi|323127536|gb|ADX24833.1| glutamine-binding protein / glutamine transport system permease protein glnP [Streptococcus dysgalactiae subsp. equisimilis ATCC 12394] Length = 725 Score = 93.6 bits (231), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 62/211 (29%), Positives = 107/211 (50%), Gaps = 27/211 (12%) Query: 190 FVFSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243 F + ++GI+ + A RL + +PL+ ++ F+ +G+P L+ +Q Sbjct: 533 FAIAMIIGIIFGMMAVSPTKSLRLISTIFVDVVRGIPLMIVAAFIFWGVPNLIESMTGHQ 592 Query: 244 LHFDKPVLGQFNFIGGSTVSP--EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301 SP +F++ IALS A+IAEIVR G+ AVP GQMEA+ Sbjct: 593 -------------------SPINDFLAATIALSLNGGAYIAEIVRGGIEAVPAGQMEASR 633 Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361 +LGL + R V+LPQA++ ++P +Q++ LK++++ A+G +L G II + Sbjct: 634 SLGLPYATTMRKVILPQAVKLMLPNFINQFVISLKDTTIVSAIGLVELFQTGKIIIARNY 693 Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 Q+ + I IYL + ++ RL ++ Sbjct: 694 QSFRMYAILAIIYLIMITLLTRLAKRLEKRL 724 >gi|297206367|ref|ZP_06923762.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus jensenii JV-V16] gi|297149493|gb|EFH29791.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus jensenii JV-V16] Length = 212 Score = 93.6 bits (231), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 55/124 (44%), Positives = 79/124 (63%), Gaps = 2/124 (1%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I LS YT+AFIAE +R+G+ +V GQME A + G+T+ +A R V+LPQA + IP L +Q Sbjct: 90 IGLSLYTSAFIAECIRAGINSVGDGQMEGARSNGMTYMQAMRFVILPQAFKVAIPSLGNQ 149 Query: 331 YLNLLKNSS-LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 ++NL+KNSS LA GF DL+ G I + Q + L+ YL L++ ++ +M L Sbjct: 150 FINLIKNSSVLAFVAGF-DLMYQGDVIAFSSFQTVNTYLVVGCFYLVLTLPLSYYMRYLE 208 Query: 390 AKIA 393 KIA Sbjct: 209 KKIA 212 Score = 36.6 bits (83), Expect = 6.4, Method: Compositional matrix adjust. Identities = 19/61 (31%), Positives = 32/61 (52%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L GF T ++ + + I+GT+ + NK+ + Y+E+FRNIP LV+ Sbjct: 12 LLSGFGVTIMISIISLCASLILGTVFAIMEVVPNKIAQAVAHTYIELFRNIPLLVITMIF 71 Query: 149 Y 149 Y Sbjct: 72 Y 72 >gi|183597012|ref|ZP_02958505.1| hypothetical protein PROSTU_00244 [Providencia stuartii ATCC 25827] gi|188023668|gb|EDU61708.1| hypothetical protein PROSTU_00244 [Providencia stuartii ATCC 25827] Length = 250 Score = 93.6 bits (231), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 48/98 (48%), Positives = 69/98 (70%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 EF++ +I L+ YT FIAE +RSG+ V +GQ AA ALGLT +A + V+LPQA++ + Sbjct: 118 EFLAGFIGLTLYTVPFIAEEIRSGIRGVRQGQKYAAFALGLTGWQAMKHVVLPQAVKIAM 177 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362 PPL QY+N++KNSSL +A+G A+L V + +QT Q Sbjct: 178 PPLLGQYMNVVKNSSLTMAIGVAELSYVSRQVESQTLQ 215 Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 27/58 (46%), Positives = 36/58 (62%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 GF+ T W++ +I AT++G +V A R S + WI VYV VFRN P LV +FF Y Sbjct: 27 GFLLTLWISICTIIAATLLGFVVAAARDSQIAPLRWIVGVYVSVFRNTPLLVQLFFWY 84 >gi|329116944|ref|ZP_08245661.1| ABC transporter, permease protein [Streptococcus parauberis NCFD 2020] gi|326907349|gb|EGE54263.1| ABC transporter, permease protein [Streptococcus parauberis NCFD 2020] Length = 234 Score = 93.6 bits (231), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 44/116 (37%), Positives = 77/116 (66%), Gaps = 8/116 (6%) Query: 243 QLHFDKPVLGQFNFI--------GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294 +L+ + P+L Q F+ G + FM+ + + Y A+IAE++RSG+ +VPR Sbjct: 71 ELYQNTPLLVQLVFVFYGLAIITHGHLMISTFMTAVLCVGIYHGAYIAEVIRSGIESVPR 130 Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 GQ+EAA++ G T+ + L++LPQA+R+I+PP+T+Q +NL+KN+S+ + AD++ Sbjct: 131 GQIEAALSQGFTYEQTMSLIVLPQALRTILPPMTNQVVNLIKNTSIVAIISGADIM 186 >gi|251782718|ref|YP_002997021.1| glutamine-binding protein/glutamine transportsystem permease [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|242391348|dbj|BAH81807.1| glutamine-binding protein/glutamine transportsystem permease protein [Streptococcus dysgalactiae subsp. equisimilis GGS_124] Length = 725 Score = 93.6 bits (231), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 62/211 (29%), Positives = 107/211 (50%), Gaps = 27/211 (12%) Query: 190 FVFSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243 F + ++GI+ + A RL + +PL+ ++ F+ +G+P L+ +Q Sbjct: 533 FAIAMIIGIIFGMMAVSPTKSLRLISTIFVDVVRGIPLMIVAAFIFWGVPNLIESMTGHQ 592 Query: 244 LHFDKPVLGQFNFIGGSTVSP--EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301 SP +F++ IALS A+IAEIVR G+ AVP GQMEA+ Sbjct: 593 -------------------SPINDFLAATIALSLNGGAYIAEIVRGGIEAVPAGQMEASR 633 Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361 +LGL + R V+LPQA++ ++P +Q++ LK++++ A+G +L G II + Sbjct: 634 SLGLPYATTMRKVILPQAVKLMLPNFINQFVISLKDTTIVSAIGLVELFQTGKIIIARNY 693 Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 Q+ + I IYL + ++ RL ++ Sbjct: 694 QSFRMYAILAIIYLIMITLLTRLAKRLEKRL 724 >gi|139473633|ref|YP_001128349.1| putative glutamine ABC transporter,glutamine-binding protein/permease protein [Streptococcus pyogenes str. Manfredo] gi|134271880|emb|CAM30117.1| putative glutamine ABC transporter,glutamine-binding protein/permease protein [Streptococcus pyogenes str. Manfredo] Length = 724 Score = 93.6 bits (231), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 56/178 (31%), Positives = 97/178 (54%), Gaps = 21/178 (11%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP--EFMSLYIALS 274 + +PL+ ++ F+ +G+P L+ +Q SP +F++ IALS Sbjct: 565 RGIPLMIVAAFIFWGVPNLIESMTGHQ-------------------SPINDFLAATIALS 605 Query: 275 CYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNL 334 A+IAEIVR G+ AVP GQMEA+ +LGL++ R V+LPQA++ ++P +Q++ Sbjct: 606 LNGGAYIAEIVRGGIEAVPAGQMEASRSLGLSYGTTMRKVILPQAVKLMLPNFINQFVIS 665 Query: 335 LKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 LK++++ A+G +L G II + Q+ + I IYL + ++ RL ++ Sbjct: 666 LKDTTIVSAIGLVELFQTGKIIIARNYQSFRMYAILAIIYLIMITLLTRLAKRLEKRL 723 >gi|76808662|ref|YP_333448.1| binding-protein-dependent transport system inner membrane component [Burkholderia pseudomallei 1710b] gi|167845798|ref|ZP_02471306.1| binding-protein-dependent transport system inner membrane component [Burkholderia pseudomallei B7210] gi|254260946|ref|ZP_04952000.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Burkholderia pseudomallei 1710a] gi|254297703|ref|ZP_04965156.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Burkholderia pseudomallei 406e] gi|76578115|gb|ABA47590.1| binding-protein-dependent transport system inner membrane component [Burkholderia pseudomallei 1710b] gi|157808031|gb|EDO85201.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Burkholderia pseudomallei 406e] gi|254219635|gb|EET09019.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Burkholderia pseudomallei 1710a] Length = 241 Score = 93.6 bits (231), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 47/96 (48%), Positives = 67/96 (69%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 EF++ ++ LS YT+AF+AE ++GL VP GQ AA ALGL+ +A R V+LPQA+R + Sbjct: 107 EFVAGWLGLSGYTSAFVAEEFQAGLRGVPAGQHHAASALGLSPLQAFRFVVLPQAVRIAL 166 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 PPL QY+NL+KNSSL +A+G A+L + +T Sbjct: 167 PPLFGQYMNLIKNSSLTMAIGVAELSYASRQVETET 202 >gi|238753990|ref|ZP_04615349.1| Binding-protein-dependent transport system inner membrane component [Yersinia ruckeri ATCC 29473] gi|238707742|gb|EEQ00101.1| Binding-protein-dependent transport system inner membrane component [Yersinia ruckeri ATCC 29473] Length = 245 Score = 93.6 bits (231), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 51/131 (38%), Positives = 83/131 (63%), Gaps = 4/131 (3%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 EF++ +I L+ Y+ AFIAE +R+G+ V +GQ AA ALGLT ++ R V+LPQA++ + Sbjct: 113 EFLAGFIGLTLYSTAFIAEELRAGISGVAKGQKYAAHALGLTGWQSMRYVVLPQALKIAM 172 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 PPL QY+N++KNSSLA+A+G A+L + +T + + + +Y+S+ +I + Sbjct: 173 PPLLGQYMNIIKNSSLAMAIGVAELSYASRQVETETLRTFQAFGVATLLYISVIALIEAW 232 Query: 385 ----MNRLNAK 391 RL A+ Sbjct: 233 GMWRQQRLAAR 243 Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust. Identities = 25/75 (33%), Positives = 39/75 (52%) Query: 83 SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142 S Y + GF+ T W++ ++ AT++G + A R S K W Y +FRN P L Sbjct: 13 SPYLGWLWDGFLLTLWISVCTVVAATLLGFFLAAARESHLKSWQWSAIAYSTLFRNTPLL 72 Query: 143 VVIFFLYKSVLSVLP 157 + +FF Y + +LP Sbjct: 73 IQLFFWYFAAGQILP 87 >gi|71903722|ref|YP_280525.1| transporter [Streptococcus pyogenes MGAS6180] gi|71802817|gb|AAX72170.1| transporter [Streptococcus pyogenes MGAS6180] Length = 724 Score = 93.6 bits (231), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 56/178 (31%), Positives = 97/178 (54%), Gaps = 21/178 (11%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP--EFMSLYIALS 274 + +PL+ ++ F+ +G+P L+ +Q SP +F++ IALS Sbjct: 565 RGIPLMIVAAFIFWGVPNLIESMTGHQ-------------------SPINDFLAATIALS 605 Query: 275 CYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNL 334 A+IAEIVR G+ AVP GQMEA+ +LGL++ R V+LPQA++ ++P +Q++ Sbjct: 606 LNGGAYIAEIVRGGIEAVPAGQMEASRSLGLSYGTTMRKVILPQAVKLMLPNFINQFVIS 665 Query: 335 LKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 LK++++ A+G +L G II + Q+ + I IYL + ++ RL ++ Sbjct: 666 LKDTTIVSAIGLVELFQTGKIIIARNYQSFRMYAILAIIYLIMITLLTRLAKRLEKRL 723 >gi|94988748|ref|YP_596849.1| glutamine transport system permease protein [Streptococcus pyogenes MGAS9429] gi|94992573|ref|YP_600672.1| glutamine-binding protein / glutamine transport system permease protein glnP [Streptococcus pyogenes MGAS2096] gi|94542256|gb|ABF32305.1| glutamine-binding protein [Streptococcus pyogenes MGAS9429] gi|94546081|gb|ABF36128.1| Glutamine-binding protein / Glutamine transport system permease protein glnP [Streptococcus pyogenes MGAS2096] Length = 724 Score = 93.6 bits (231), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 56/178 (31%), Positives = 97/178 (54%), Gaps = 21/178 (11%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP--EFMSLYIALS 274 + +PL+ ++ F+ +G+P L+ +Q SP +F++ IALS Sbjct: 565 RGIPLMIVAAFIFWGVPNLIESMTGHQ-------------------SPINDFLAATIALS 605 Query: 275 CYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNL 334 A+IAEIVR G+ AVP GQMEA+ +LGL++ R V+LPQA++ ++P +Q++ Sbjct: 606 LNGGAYIAEIVRGGIEAVPAGQMEASRSLGLSYGTTMRKVILPQAVKLMLPNFINQFVIS 665 Query: 335 LKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 LK++++ A+G +L G II + Q+ + I IYL + ++ RL ++ Sbjct: 666 LKDTTIVSAIGLVELFQTGKIIIARNYQSFRMYAILAIIYLIMITLLTRLAKRLEKRL 723 >gi|323126803|gb|ADX24100.1| amino acid ABC transporter, permease protein [Streptococcus dysgalactiae subsp. equisimilis ATCC 12394] Length = 233 Score = 93.6 bits (231), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 55/157 (35%), Positives = 90/157 (57%), Gaps = 8/157 (5%) Query: 243 QLHFDKPVLGQ--FNFIGGSTVSPEFM--SLYIALSC----YTAAFIAEIVRSGLIAVPR 294 + + + P+L Q F + G + +S F+ S ++ C Y AA+IAE++RSG+ AVP+ Sbjct: 70 EFYQNTPLLVQVVFMYYGLAIISKSFIMPSAFLTTVCCVGLYHAAYIAEVIRSGIEAVPK 129 Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354 GQ EAA++ G T + L+++PQA+R+I+PPLT+Q +NL+KN+S+ + ADL+ Sbjct: 130 GQTEAALSQGFTRLQTMSLIIIPQAVRTILPPLTNQVVNLIKNTSIVAIISGADLMFTAK 189 Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 T + F+Y L IA+F R + Sbjct: 190 VWAYDTTYYVPAFAGAAFLYFILCFPIAIFGRRQEER 226 >gi|291454091|ref|ZP_06593481.1| permease [Streptomyces albus J1074] gi|291357040|gb|EFE83942.1| permease [Streptomyces albus J1074] Length = 286 Score = 93.6 bits (231), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 76/244 (31%), Positives = 123/244 (50%), Gaps = 20/244 (8%) Query: 158 IPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGK 217 IPD+ F N+R LS T+ V V G++L++ RLS++ Sbjct: 34 IPDY--------FFNDRILSGVRETLILTVLSMVIGVVGGVLLAVM--RLSKN---PVVS 80 Query: 218 ALPLLYISTFLIFGLPTLVLIALKYQLHF--DKPVLGQFNFIGGSTVSPEFMSLYIALSC 275 ++ YI F G P LV + + + L F + LG F S F++ + L Sbjct: 81 SIAWFYIWFFR--GTPVLVQLFVWFNLGFVFEYMNLGPFYKDEWSDFMTPFLTALLGLGL 138 Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335 AA++AEI R+GL++V GQ EAA ALG++ K R ++LPQAMR I+PP ++ +N+L Sbjct: 139 NEAAYMAEICRAGLLSVDEGQTEAAHALGMSQGKTLRRIVLPQAMRVIVPPTGNEVINML 198 Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI---WMFIYLSLSIMIALFMNRLNAKI 392 K +SL AV + +L I +G +E + + W I S+ + ++ R A+ Sbjct: 199 KTTSLVAAVQYYELFKHAQDIGMTSGATVEALFLAATWYLILTSILSIGQYYIERYYARG 258 Query: 393 ALKE 396 +L++ Sbjct: 259 SLRQ 262 >gi|53719421|ref|YP_108407.1| putative amino acid transport system, membrane protein [Burkholderia pseudomallei K96243] gi|124385114|ref|YP_001026325.1| general L-amino acid transport system permease protein aapQ [Burkholderia mallei NCTC 10229] gi|126438631|ref|YP_001058920.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Burkholderia pseudomallei 668] gi|126450446|ref|YP_001080401.1| binding-protein-dependent transport system inner membrane component [Burkholderia mallei NCTC 10247] gi|126452880|ref|YP_001066163.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Burkholderia pseudomallei 1106a] gi|167815881|ref|ZP_02447561.1| binding-protein-dependent transport system inner membrane component [Burkholderia pseudomallei 91] gi|167824251|ref|ZP_02455722.1| binding-protein-dependent transport system inner membrane component [Burkholderia pseudomallei 9] gi|167902771|ref|ZP_02489976.1| binding-protein-dependent transport system inner membrane component [Burkholderia pseudomallei NCTC 13177] gi|167911016|ref|ZP_02498107.1| binding-protein-dependent transport system inner membrane component [Burkholderia pseudomallei 112] gi|237812177|ref|YP_002896628.1| general L-amino acid transport system permease protein AapQ [Burkholderia pseudomallei MSHR346] gi|242316618|ref|ZP_04815634.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Burkholderia pseudomallei 1106b] gi|254179863|ref|ZP_04886462.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Burkholderia pseudomallei 1655] gi|254188733|ref|ZP_04895244.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Burkholderia pseudomallei Pasteur 52237] gi|52209835|emb|CAH35807.1| putative amino acid transport system, membrane protein [Burkholderia pseudomallei K96243] gi|124293134|gb|ABN02403.1| general L-amino acid transport system permease protein aapQ [Burkholderia mallei NCTC 10229] gi|126218124|gb|ABN81630.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Burkholderia pseudomallei 668] gi|126226522|gb|ABN90062.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Burkholderia pseudomallei 1106a] gi|126243316|gb|ABO06409.1| binding-protein-dependent transport system inner membrane component [Burkholderia mallei NCTC 10247] gi|157936412|gb|EDO92082.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Burkholderia pseudomallei Pasteur 52237] gi|184210403|gb|EDU07446.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Burkholderia pseudomallei 1655] gi|237504603|gb|ACQ96921.1| general L-amino acid transport system permease protein AapQ [Burkholderia pseudomallei MSHR346] gi|242139857|gb|EES26259.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Burkholderia pseudomallei 1106b] Length = 241 Score = 93.6 bits (231), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 47/96 (48%), Positives = 67/96 (69%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 EF++ ++ LS YT+AF+AE ++GL VP GQ AA ALGL+ +A R V+LPQA+R + Sbjct: 107 EFVAGWLGLSGYTSAFVAEEFQAGLRGVPAGQHHAASALGLSPLQAFRFVVLPQAVRIAL 166 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 PPL QY+NL+KNSSL +A+G A+L + +T Sbjct: 167 PPLFGQYMNLIKNSSLTMAIGVAELSYASRQVETET 202 >gi|167894369|ref|ZP_02481771.1| binding-protein-dependent transport system inner membrane component [Burkholderia pseudomallei 7894] gi|167919031|ref|ZP_02506122.1| binding-protein-dependent transport system inner membrane component [Burkholderia pseudomallei BCC215] Length = 241 Score = 93.6 bits (231), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 47/96 (48%), Positives = 67/96 (69%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 EF++ ++ LS YT+AF+AE ++GL VP GQ AA ALGL+ +A R V+LPQA+R + Sbjct: 107 EFVAGWLGLSGYTSAFVAEEFQAGLRGVPAGQHHAASALGLSPLQAFRFVVLPQAVRIAL 166 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 PPL QY+NL+KNSSL +A+G A+L + +T Sbjct: 167 PPLFGQYMNLIKNSSLTMAIGVAELSYASRQVETET 202 >gi|254252392|ref|ZP_04945710.1| ABC-type amino acid transport system permease component [Burkholderia dolosa AUO158] gi|124895001|gb|EAY68881.1| ABC-type amino acid transport system permease component [Burkholderia dolosa AUO158] Length = 309 Score = 93.6 bits (231), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 47/96 (48%), Positives = 66/96 (68%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 EF++ ++ LS YTAAF+AE +GL V R Q +AA ALG T ++ R V+LPQA+R + Sbjct: 175 EFVAGWVGLSAYTAAFVAEECEAGLRGVRRAQHDAAAALGFTPMQSLRYVVLPQAVRIAL 234 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 PPL QY+NL+KNSSLA+A+G A+L + +T Sbjct: 235 PPLFGQYMNLVKNSSLAMAIGVAELSYASRQVETET 270 >gi|46579164|ref|YP_009972.1| His/Glu/Gln/Arg/opine ABC transporter permease [Desulfovibrio vulgaris str. Hildenborough] gi|46448577|gb|AAS95231.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Desulfovibrio vulgaris str. Hildenborough] gi|311233002|gb|ADP85856.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio vulgaris RCH1] Length = 596 Score = 93.6 bits (231), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 44/85 (51%), Positives = 64/85 (75%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 EF I LS YT+AF+AE++R+GL ++P+G +EAA + GL + + R ++LP A R+II Sbjct: 138 EFWCATIGLSVYTSAFMAEVIRAGLQSIPKGLLEAAYSSGLNYVQVLRTIILPMAFRAII 197 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADL 349 PPL S++LN +KNSSLA+ VG A+L Sbjct: 198 PPLGSEFLNNMKNSSLAMVVGVAEL 222 Score = 86.3 bits (212), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 66/205 (32%), Positives = 113/205 (55%), Gaps = 18/205 (8%) Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252 SF +G+V+ + R + + LLYI LI G P +++I + ++F PVL Sbjct: 404 SFFIGLVVGI-----GRTSDNRICRIPCLLYIE--LIRGNPLIIVI---FWIYFFIPVL- 452 Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312 FN T F S IAL+ +T A++AEIVR+G+ +P GQ+EAA + GLT + R Sbjct: 453 -FN-----TFFNVFWSATIALTLFTGAYLAEIVRAGIQNIPAGQVEAAYSTGLTFVQTMR 506 Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ-TGQAIEIILIWM 371 ++LPQA++ +IP + Q++ + K++SLA +G +L V I N+ +EI Sbjct: 507 RIILPQALKQMIPAIVGQFIAIFKDTSLAFVLGVLELTFVAQGINNRLMVYPMEIYGTVA 566 Query: 372 FIYLSLSIMIALFMNRLNAKIALKE 396 F+Y ++++ RL +++ ++ Sbjct: 567 FLYFICCWSMSVYAARLERRLSPEK 591 Score = 38.1 bits (87), Expect = 2.2, Method: Compositional matrix adjust. Identities = 17/40 (42%), Positives = 27/40 (67%) Query: 110 IGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 IG +VG GR S N++ C +Y+E+ R P ++VIF++Y Sbjct: 407 IGLVVGIGRTSDNRICRIPCLLYIELIRGNPLIIVIFWIY 446 >gi|94990641|ref|YP_598741.1| glutamine-binding protein / glutamine transport system permease protein glnP [Streptococcus pyogenes MGAS10270] gi|94544149|gb|ABF34197.1| Glutamine-binding protein / Glutamine transport system permease protein glnP [Streptococcus pyogenes MGAS10270] Length = 724 Score = 93.6 bits (231), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 56/178 (31%), Positives = 97/178 (54%), Gaps = 21/178 (11%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP--EFMSLYIALS 274 + +PL+ ++ F+ +G+P L+ +Q SP +F++ IALS Sbjct: 565 RGIPLMIVAAFIFWGVPNLIESMTGHQ-------------------SPINDFLAATIALS 605 Query: 275 CYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNL 334 A+IAEIVR G+ AVP GQMEA+ +LGL++ R V+LPQA++ ++P +Q++ Sbjct: 606 LNGGAYIAEIVRGGIEAVPAGQMEASRSLGLSYGTTMRKVILPQAVKLMLPNFINQFVIS 665 Query: 335 LKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 LK++++ A+G +L G II + Q+ + I IYL + ++ RL ++ Sbjct: 666 LKDTTIVSAIGLVELFQTGKIIIARNYQSFRMYAILAIIYLIMITLLTRLAKRLEKRL 723 >gi|19746296|ref|NP_607432.1| hypothetical protein spyM18_1327 [Streptococcus pyogenes MGAS8232] gi|19748486|gb|AAL97931.1| hypothetical protein spyM18_1327 [Streptococcus pyogenes MGAS8232] Length = 724 Score = 93.6 bits (231), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 56/178 (31%), Positives = 97/178 (54%), Gaps = 21/178 (11%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP--EFMSLYIALS 274 + +PL+ ++ F+ +G+P L+ +Q SP +F++ IALS Sbjct: 565 RGIPLMIVAAFIFWGVPNLIESMTGHQ-------------------SPINDFLAATIALS 605 Query: 275 CYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNL 334 A+IAEIVR G+ AVP GQMEA+ +LGL++ R V+LPQA++ ++P +Q++ Sbjct: 606 LNGGAYIAEIVRGGIEAVPAGQMEASRSLGLSYGTTMRKVILPQAVKLMLPNFINQFVIS 665 Query: 335 LKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 LK++++ A+G +L G II + Q+ + I IYL + ++ RL ++ Sbjct: 666 LKDTTIVSAIGLVELFQTGKIIIARNYQSFRMYAILAIIYLIMITLLTRLAKRLEKRL 723 >gi|300312813|ref|YP_003776905.1| glutamate/aspartate ABC transporter permease [Herbaspirillum seropedicae SmR1] gi|300075598|gb|ADJ64997.1| ABC-type glutamate/aspartate transport system, permease component protein [Herbaspirillum seropedicae SmR1] Length = 241 Score = 93.6 bits (231), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 50/133 (37%), Positives = 81/133 (60%) Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321 ++ +F+ + L +TAA + E VRSG+ ++PRGQ A +ALGLT + VLLP AMR Sbjct: 103 MTQQFVMAMLCLGMFTAARVCEQVRSGIESLPRGQKGAGLALGLTLGQTYLFVLLPMAMR 162 Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 ++PPLTS++LN+ KNS++A +G +L + G +++ T Q E + Y+ ++I + Sbjct: 163 IVLPPLTSEFLNIFKNSAVASTIGLLELAAQGRQLVDYTAQPYEAFIAVTLAYMLINICV 222 Query: 382 ALFMNRLNAKIAL 394 M L K +L Sbjct: 223 MSLMRILERKTSL 235 Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust. Identities = 30/87 (34%), Positives = 45/87 (51%) Query: 80 TSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNI 139 ++ +Y +L G T L S I A ++GT +G R N+ ++ YVE+FRN+ Sbjct: 15 STGQTYLDWLLSGLGVTVALGLSAWILALVLGTFLGILRTLPNRALSGFAACYVELFRNV 74 Query: 140 PPLVVIFFLYKSVLSVLPIPDHSIVLP 166 P LV IF Y ++ +LP D LP Sbjct: 75 PLLVQIFIWYFAMPELLPWGDAVKALP 101 >gi|120603262|ref|YP_967662.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio vulgaris DP4] gi|120563491|gb|ABM29235.1| amino acid ABC transporter membrane protein 1, PAAT family / amino acid ABC transporter membrane protein 2, PAAT family [Desulfovibrio vulgaris DP4] Length = 596 Score = 93.6 bits (231), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 44/85 (51%), Positives = 64/85 (75%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 EF I LS YT+AF+AE++R+GL ++P+G +EAA + GL + + R ++LP A R+II Sbjct: 138 EFWCATIGLSVYTSAFMAEVIRAGLQSIPKGLLEAAYSSGLNYVQVLRTIILPMAFRAII 197 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADL 349 PPL S++LN +KNSSLA+ VG A+L Sbjct: 198 PPLGSEFLNNMKNSSLAMVVGVAEL 222 Score = 86.3 bits (212), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 66/205 (32%), Positives = 113/205 (55%), Gaps = 18/205 (8%) Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252 SF +G+V+ + R + + LLYI LI G P +++I + ++F PVL Sbjct: 404 SFFIGLVVGI-----GRTSDNRICRIPCLLYIE--LIRGNPLIIVI---FWIYFFIPVL- 452 Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312 FN T F S IAL+ +T A++AEIVR+G+ +P GQ+EAA + GLT + R Sbjct: 453 -FN-----TFFNVFWSATIALTLFTGAYLAEIVRAGIQNIPAGQVEAAYSTGLTFVQTMR 506 Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ-TGQAIEIILIWM 371 ++LPQA++ +IP + Q++ + K++SLA +G +L V I N+ +EI Sbjct: 507 RIILPQALKQMIPAIVGQFIAIFKDTSLAFVLGVLELTFVAQGINNRLMVYPMEIYGTVA 566 Query: 372 FIYLSLSIMIALFMNRLNAKIALKE 396 F+Y ++++ RL +++ ++ Sbjct: 567 FLYFICCWSMSVYAARLERRLSPEK 591 Score = 38.1 bits (87), Expect = 2.2, Method: Compositional matrix adjust. Identities = 17/40 (42%), Positives = 27/40 (67%) Query: 110 IGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 IG +VG GR S N++ C +Y+E+ R P ++VIF++Y Sbjct: 407 IGLVVGIGRTSDNRICRIPCLLYIELIRGNPLIIVIFWIY 446 >gi|255284289|ref|ZP_05348844.1| glutamine ABC transporter, glutamine-binding protein/permease protein [Bryantella formatexigens DSM 14469] gi|255265183|gb|EET58388.1| glutamine ABC transporter, glutamine-binding protein/permease protein [Bryantella formatexigens DSM 14469] Length = 223 Score = 93.6 bits (231), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 58/206 (28%), Positives = 116/206 (56%), Gaps = 11/206 (5%) Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251 F+ ++G++++LF GK L I T + + + LI L Y ++F P Sbjct: 29 FAMIIGLIVALF----------NVGKNRVLNLIGTIFVDAVRGVPLIVLAYFVYFGVPQA 78 Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311 + + G +S + IALS A++AEI+R+G+ +V +GQMEA+ +LGL++ K+ Sbjct: 79 AKMMNVSGFRLSA-LTAGIIALSMNCGAYMAEIIRAGIESVDKGQMEASRSLGLSYGKSM 137 Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371 RL+++PQA+R++IP + +Q++ LK++S+ +GF +LV+ + T +++ I Sbjct: 138 RLIIIPQAIRTMIPSIINQFIITLKDTSILSVIGFPELVNTAKNVAGNTFMNLQVWAIVG 197 Query: 372 FIYLSLSIMIALFMNRLNAKIALKEK 397 +Y+ + I ++ R+ ++ ++ Sbjct: 198 VMYMVVIITLSKVAKRVERRLKRGQQ 223 >gi|21910533|ref|NP_664801.1| putative glutamine ABC transporter glutamine-binding protein/permease protein [Streptococcus pyogenes MGAS315] gi|28895773|ref|NP_802123.1| hypothetical protein SPs0861 [Streptococcus pyogenes SSI-1] gi|21904733|gb|AAM79604.1| putative glutamine ABC transporter, glutamine-binding protein/permease protein [Streptococcus pyogenes MGAS315] gi|28811022|dbj|BAC63956.1| hypothetical protein [Streptococcus pyogenes SSI-1] Length = 724 Score = 93.6 bits (231), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 56/178 (31%), Positives = 97/178 (54%), Gaps = 21/178 (11%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP--EFMSLYIALS 274 + +PL+ ++ F+ +G+P L+ +Q SP +F++ IALS Sbjct: 565 RGIPLMIVAAFIFWGVPNLIESMTGHQ-------------------SPINDFLAATIALS 605 Query: 275 CYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNL 334 A+IAEIVR G+ AVP GQMEA+ +LGL++ R V+LPQA++ ++P +Q++ Sbjct: 606 LNGGAYIAEIVRGGIEAVPAGQMEASRSLGLSYGTTMRKVILPQAVKLMLPNFINQFVIS 665 Query: 335 LKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 LK++++ A+G +L G II + Q+ + I IYL + ++ RL ++ Sbjct: 666 LKDTTIVSAIGLVELFQTGKIIIARNYQSFRMYAILAIIYLIMITLLTRLAKRLEKRL 723 >gi|77409421|ref|ZP_00786118.1| GlnP [Streptococcus agalactiae COH1] gi|77171979|gb|EAO75151.1| GlnP [Streptococcus agalactiae COH1] Length = 469 Score = 93.6 bits (231), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 60/211 (28%), Positives = 108/211 (51%), Gaps = 27/211 (12%) Query: 190 FVFSFVLGIVLSLFATRLSRHFHE------KTGKALPLLYISTFLIFGLPTLVLIALKYQ 243 F + V+GI+ + + S + +PL+ ++ F+ +G+P L+ +Q Sbjct: 277 FAIAMVIGIIFGMMSVSPSNTLRTISMIFVDIVRGIPLMIVAAFIFWGIPNLIESITGHQ 336 Query: 244 LHFDKPVLGQFNFIGGSTVSP--EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301 SP +F++ IALS A+IAEIVR G+ AVP GQMEA+ Sbjct: 337 -------------------SPINDFVAATIALSLNGGAYIAEIVRGGIEAVPSGQMEASR 377 Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361 +LG+++ K + V+LPQA+R ++P +Q++ LK++++ A+G +L G II + Sbjct: 378 SLGISYGKTMQKVILPQAVRLMLPNFINQFVISLKDTTIVSAIGLVELFQTGKIIIARNY 437 Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 Q+ + I +YL + ++ RL ++ Sbjct: 438 QSFRMYAILAIMYLVIITLLTRLAKRLEKRL 468 >gi|307130054|ref|YP_003882070.1| membrane protein of an ABC superfamily glutamate and aspartate transporter [Dickeya dadantii 3937] gi|306527583|gb|ADM97513.1| membrane component of an ABC superfamily glutamate and aspartate transporter [Dickeya dadantii 3937] Length = 246 Score = 93.6 bits (231), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 49/129 (37%), Positives = 77/129 (59%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+S L +TAA + E VR+G+ ++PRGQ A +A+GLT + R VLLP A R ++P Sbjct: 111 FLSSMFCLGMFTAARVCEQVRAGIQSLPRGQKAAGLAIGLTLPQTYRYVLLPNAYRVVVP 170 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PLTS+ LNL+KNS++A +G D+ + G +++ + A E Y+ ++ +I L M Sbjct: 171 PLTSEMLNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAYESFSAITLAYIGINAIIMLIM 230 Query: 386 NRLNAKIAL 394 + K L Sbjct: 231 QIVEHKTRL 239 Score = 43.9 bits (102), Expect = 0.039, Method: Compositional matrix adjust. Identities = 27/77 (35%), Positives = 43/77 (55%) Query: 81 SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140 +++Y I+ G T L+ + A ++G+L+G R N+L+A I YVE+FRN+P Sbjct: 17 GNTTYLGWIISGLQVTVTLSLCAWVIAFLLGSLLGILRTVPNRLLAGIGTCYVELFRNVP 76 Query: 141 PLVVIFFLYKSVLSVLP 157 +V F Y V +LP Sbjct: 77 LIVQFFSWYLVVPELLP 93 >gi|71910889|ref|YP_282439.1| transporter [Streptococcus pyogenes MGAS5005] gi|71853671|gb|AAZ51694.1| transporter [Streptococcus pyogenes MGAS5005] Length = 724 Score = 93.6 bits (231), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 56/178 (31%), Positives = 97/178 (54%), Gaps = 21/178 (11%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP--EFMSLYIALS 274 + +PL+ ++ F+ +G+P L+ +Q SP +F++ IALS Sbjct: 565 RGIPLMIVAAFIFWGVPNLIESMTGHQ-------------------SPINDFLAATIALS 605 Query: 275 CYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNL 334 A+IAEIVR G+ AVP GQMEA+ +LGL++ R V+LPQA++ ++P +Q++ Sbjct: 606 LNGGAYIAEIVRGGIEAVPAGQMEASRSLGLSYGTTMRKVILPQAVKLMLPNFINQFVIS 665 Query: 335 LKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 LK++++ A+G +L G II + Q+ + I IYL + ++ RL ++ Sbjct: 666 LKDTTIVSAIGLVELFQTGKIIIARNYQSFRMYAILAIIYLIMITLLTRLAKRLEKRL 723 >gi|327399611|ref|YP_004340480.1| polar amino acid ABC transporter inner membrane subunit [Hippea maritima DSM 10411] gi|327182240|gb|AEA34421.1| polar amino acid ABC transporter, inner membrane subunit [Hippea maritima DSM 10411] Length = 314 Score = 93.6 bits (231), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 63/209 (30%), Positives = 109/209 (52%), Gaps = 15/209 (7%) Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247 K+ + S ++ +V+ F L R K L ++YI LI G P LV I + Y Sbjct: 121 KVSLLSIIMALVIG-FIVGLMRISDNPLFKNLAIVYIE--LIRGTPLLVQIFIIY----- 172 Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307 FIG F + AL+ + A+IAEI+R+G+ ++PRGQ EAA+ALG+ + Sbjct: 173 -------FFIGTIFSMTRFFAGAFALAVFEGAYIAEIIRAGIQSIPRGQTEAAVALGMNY 225 Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367 + R +++PQA++ ++P L Q+++L+K+SSL + +L G I++ T E+ Sbjct: 226 YQVMRYIIMPQAIKRVLPALAGQFISLIKDSSLLSVISLTELTKAGKEIVSSTFSPFEVW 285 Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIALKE 396 +Y ++ ++L L ++A E Sbjct: 286 FSVAALYFIVTYTLSLLDRYLERRLAGNE 314 Score = 40.0 bits (92), Expect = 0.69, Method: Compositional matrix adjust. Identities = 27/69 (39%), Positives = 40/69 (57%), Gaps = 1/69 (1%) Query: 82 DSSY-ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140 +SSY A +L+G T ++ +I A +IG +VG R+S N L + VY+E+ R P Sbjct: 104 NSSYKAGPLLMGLYMTIKVSLLSIIMALVIGFIVGLMRISDNPLFKNLAIVYIELIRGTP 163 Query: 141 PLVVIFFLY 149 LV IF +Y Sbjct: 164 LLVQIFIIY 172 >gi|209559563|ref|YP_002286035.1| Glutamine ABC transporter, glutamine-binding protein/permease protein [Streptococcus pyogenes NZ131] gi|209540764|gb|ACI61340.1| Glutamine ABC transporter, glutamine-binding protein/permease protein [Streptococcus pyogenes NZ131] Length = 724 Score = 93.6 bits (231), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 56/178 (31%), Positives = 97/178 (54%), Gaps = 21/178 (11%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP--EFMSLYIALS 274 + +PL+ ++ F+ +G+P L+ +Q SP +F++ IALS Sbjct: 565 RGIPLMIVAAFIFWGVPNLIESMTGHQ-------------------SPINDFLAATIALS 605 Query: 275 CYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNL 334 A+IAEIVR G+ AVP GQMEA+ +LGL++ R V+LPQA++ ++P +Q++ Sbjct: 606 LNGGAYIAEIVRGGIEAVPAGQMEASRSLGLSYGTTMRKVILPQAVKLMLPNFINQFVIS 665 Query: 335 LKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 LK++++ A+G +L G II + Q+ + I IYL + ++ RL ++ Sbjct: 666 LKDTTIVSAIGLVELFQTGKIIIARNYQSFRMYAILAIIYLIMITLLTRLAKRLEKRL 723 >gi|226196378|ref|ZP_03791960.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Burkholderia pseudomallei Pakistan 9] gi|225931595|gb|EEH27600.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Burkholderia pseudomallei Pakistan 9] Length = 231 Score = 93.6 bits (231), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 47/96 (48%), Positives = 67/96 (69%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 EF++ ++ LS YT+AF+AE ++GL VP GQ AA ALGL+ +A R V+LPQA+R + Sbjct: 97 EFVAGWLGLSGYTSAFVAEEFQAGLRGVPAGQHHAASALGLSPLQAFRFVVLPQAVRIAL 156 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 PPL QY+NL+KNSSL +A+G A+L + +T Sbjct: 157 PPLFGQYMNLIKNSSLTMAIGVAELSYASRQVETET 192 >gi|50914391|ref|YP_060363.1| glutamine transport system permease protein [Streptococcus pyogenes MGAS10394] gi|50903465|gb|AAT87180.1| Glutamine-binding protein [Streptococcus pyogenes MGAS10394] Length = 724 Score = 93.6 bits (231), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 56/178 (31%), Positives = 97/178 (54%), Gaps = 21/178 (11%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP--EFMSLYIALS 274 + +PL+ ++ F+ +G+P L+ +Q SP +F++ IALS Sbjct: 565 RGIPLMIVAAFIFWGVPNLIESMTGHQ-------------------SPINDFLAATIALS 605 Query: 275 CYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNL 334 A+IAEIVR G+ AVP GQMEA+ +LGL++ R V+LPQA++ ++P +Q++ Sbjct: 606 LNGGAYIAEIVRGGIEAVPAGQMEASRSLGLSYGTTMRKVILPQAVKLMLPNFINQFVIS 665 Query: 335 LKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 LK++++ A+G +L G II + Q+ + I IYL + ++ RL ++ Sbjct: 666 LKDTTIVSAIGLVELFQTGKIIIARNYQSFRMYAILAIIYLIMITLLTRLAKRLEKRL 723 >gi|121606346|ref|YP_983675.1| polar amino acid ABC transporter inner membrane subunit [Polaromonas naphthalenivorans CJ2] gi|120595315|gb|ABM38754.1| amino acid ABC transporter membrane protein 1, PAAT family [Polaromonas naphthalenivorans CJ2] Length = 221 Score = 93.6 bits (231), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 56/135 (41%), Positives = 83/135 (61%), Gaps = 7/135 (5%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P F+ + +AL +T+A IAE VR+G+ A+ RGQ A +ALG T + R V+LP A R I Sbjct: 78 PGFVLVVLALGFFTSARIAEQVRAGIQALARGQRYAGMALGFTTAQTYRYVILPMAFRII 137 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 +PPLTS+ +NLLKNSS+A AV A+L +T + +E IY++++ + A+ Sbjct: 138 LPPLTSESMNLLKNSSVAFAVSIAELTMFAMQAQEETSRGVE-------IYIAVTALYAI 190 Query: 384 FMNRLNAKIALKEKK 398 +N +AL EKK Sbjct: 191 SAFAVNRLMALAEKK 205 Score = 38.9 bits (89), Expect = 1.6, Method: Compositional matrix adjust. Identities = 30/76 (39%), Positives = 39/76 (51%), Gaps = 10/76 (13%) Query: 107 ATIIGTLVGAGRLSANKLVAWICR---VYVEVFRNIPPLVVIFFLYKSVLSVLP----IP 159 A ++G L+G R N W+ R V+VE+FRNIP LV IF Y V + P IP Sbjct: 21 AMVVGALMGTLRTLPNS--PWLVRLGNVWVELFRNIPLLVQIFLWYFVVPKMFPAMQQIP 78 Query: 160 DHS-IVLPFGMFLNNR 174 +VL G F + R Sbjct: 79 GFVLVVLALGFFTSAR 94 >gi|163789691|ref|ZP_02184128.1| glutamine ABC transporter permease component [Carnobacterium sp. AT7] gi|159874913|gb|EDP68980.1| glutamine ABC transporter permease component [Carnobacterium sp. AT7] Length = 215 Score = 93.6 bits (231), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 43/90 (47%), Positives = 64/90 (71%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I L+ YT+AFIAE VR+G++ VP+GQ EA ++ GLT + R ++LPQA + +IPPL +Q Sbjct: 90 IGLTIYTSAFIAETVRAGIMGVPKGQTEAGLSTGLTQNETMRYIVLPQAFKIVIPPLGNQ 149 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 ++NL+KNSS+ V DL+ G I ++T Sbjct: 150 FINLVKNSSVLAMVTGLDLMYQGDLIASET 179 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 24/67 (35%), Positives = 42/67 (62%) Query: 83 SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142 ++Y ++ GF+NT + + + + IIGTL+ +LS NK ++ + YVE F+NIP L Sbjct: 6 TTYPDVLIDGFLNTLYSSIIALFFSLIIGTLMAILQLSKNKWISGLANAYVEFFKNIPLL 65 Query: 143 VVIFFLY 149 +++ F Y Sbjct: 66 IIVMFFY 72 >gi|319795336|ref|YP_004156976.1| polar amino acid ABC transporter, inner membrane subunit [Variovorax paradoxus EPS] gi|315597799|gb|ADU38865.1| polar amino acid ABC transporter, inner membrane subunit [Variovorax paradoxus EPS] Length = 241 Score = 93.2 bits (230), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 60/170 (35%), Positives = 100/170 (58%), Gaps = 11/170 (6%) Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286 F++ GLP L++I + +F P L + +F ++ IAL + AA++AEIVR Sbjct: 66 FVVRGLPLLMVI---FWAYFFLPSLTGVK-------TDQFTTMLIALVIFDAAYLAEIVR 115 Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346 +G+ +PRGQME A ALGL++ +A RLV+LPQA+RS++P L +Q+++ +K +SL +G Sbjct: 116 AGIQGLPRGQMETARALGLSYFRAMRLVVLPQALRSMLPSLVNQFVSTIKETSLGYIIGL 175 Query: 347 ADLVSVGGTIINQT-GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395 A++ + I Q + +I LI Y L ++ F L ++A + Sbjct: 176 AEVSFIATQINTQVFTKPAQIYLILGGTYFILCFGLSRFAYWLERRLARR 225 >gi|94994565|ref|YP_602663.1| Glutamine-binding protein / Glutamine transport system permease protein glnP [Streptococcus pyogenes MGAS10750] gi|306827161|ref|ZP_07460451.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus pyogenes ATCC 10782] gi|94548073|gb|ABF38119.1| Glutamine-binding protein / Glutamine transport system permease protein glnP [Streptococcus pyogenes MGAS10750] gi|304430617|gb|EFM33636.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus pyogenes ATCC 10782] Length = 724 Score = 93.2 bits (230), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 56/178 (31%), Positives = 97/178 (54%), Gaps = 21/178 (11%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP--EFMSLYIALS 274 + +PL+ ++ F+ +G+P L+ +Q SP +F++ IALS Sbjct: 565 RGIPLMIVAAFIFWGVPNLIESMTGHQ-------------------SPINDFLAATIALS 605 Query: 275 CYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNL 334 A+IAEIVR G+ AVP GQMEA+ +LGL++ R V+LPQA++ ++P +Q++ Sbjct: 606 LNGGAYIAEIVRGGIEAVPAGQMEASRSLGLSYGTTMRKVILPQAVKLMLPNFINQFVIS 665 Query: 335 LKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 LK++++ A+G +L G II + Q+ + I IYL + ++ RL ++ Sbjct: 666 LKDTTIVSAIGLVELFQTGKIIIARNYQSFRMYAILAIIYLIMITLLTRLAKRLEKRL 723 >gi|167719669|ref|ZP_02402905.1| binding-protein-dependent transport system inner membrane component [Burkholderia pseudomallei DM98] Length = 241 Score = 93.2 bits (230), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 47/96 (48%), Positives = 67/96 (69%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 EF++ ++ LS YT+AF+AE ++GL VP GQ AA ALGL+ +A R V+LPQA+R + Sbjct: 107 EFVAGWLGLSGYTSAFVAEEFQAGLRGVPAGQHHAASALGLSPLQAFRFVVLPQAVRIAL 166 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 PPL QY+NL+KNSSL +A+G A+L + +T Sbjct: 167 PPLFGQYMNLIKNSSLTMAIGVAELSYASRQVETET 202 >gi|226315384|ref|YP_002775280.1| glutamine ABC transporter permease protein [Brevibacillus brevis NBRC 100599] gi|226098334|dbj|BAH46776.1| glutamine ABC transporter permease protein [Brevibacillus brevis NBRC 100599] Length = 217 Score = 93.2 bits (230), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 63/208 (30%), Positives = 107/208 (51%), Gaps = 29/208 (13%) Query: 192 FSFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPTLVLIALKYQLH 245 F+ ++G++ L +T S+ + PLL F+ FGLP ++ I + Sbjct: 32 FALLIGLLFGLMSTSRSKLLRGIATAYVDFLRGTPLLVQIFFIYFGLPPVLDIKI----- 86 Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305 PE + +ALS A++AEI R G++++ +GQMEAA +LGL Sbjct: 87 ------------------PETTAGILALSLNAGAYLAEIFRGGILSIDKGQMEAARSLGL 128 Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365 +H KA RLV+LPQA+R +IP +Q++ LK++SL +G +L++ G II+ ++ E Sbjct: 129 SHGKAMRLVILPQAVRRMIPAFVNQFIVTLKDTSLLTVIGIRELMNSGEIIISSNFRSFE 188 Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIA 393 I + Y + +++L L + A Sbjct: 189 IWAVVAVFYFLMIYILSLLSRSLERRFA 216 >gi|238765552|ref|ZP_04626465.1| Binding-protein-dependent transport system inner membrane component [Yersinia kristensenii ATCC 33638] gi|238696230|gb|EEP89034.1| Binding-protein-dependent transport system inner membrane component [Yersinia kristensenii ATCC 33638] Length = 245 Score = 93.2 bits (230), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 50/131 (38%), Positives = 83/131 (63%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 EF++ +I L+ Y+ AFIAE +RSG+ V +GQ AA ALGLT ++ R V+LPQA++ + Sbjct: 113 EFLAGFIGLTFYSTAFIAEELRSGISGVAKGQKYAAHALGLTGWQSMRHVVLPQALKIAM 172 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 PPL QY+N++KNSSLA+A+G A+L + +T + + + +Y+++ +I + Sbjct: 173 PPLLGQYMNIIKNSSLAMAIGVAELSYASRQVETETLRTFQAFGVATVLYIAIIALIEAW 232 Query: 385 MNRLNAKIALK 395 + A+K Sbjct: 233 GMWRQQRTAVK 243 Score = 45.1 bits (105), Expect = 0.021, Method: Compositional matrix adjust. Identities = 23/66 (34%), Positives = 37/66 (56%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151 GF+ T W++ ++ +T++G L+ A R S K + W Y +FRN P L+ +FF Y + Sbjct: 22 GFLLTLWISACTVVASTLLGFLLAAARDSELKGLQWFAIGYSTLFRNTPLLIQLFFWYFA 81 Query: 152 VLSVLP 157 LP Sbjct: 82 ASQFLP 87 >gi|167571225|ref|ZP_02364099.1| hypothetical protein BoklC_15392 [Burkholderia oklahomensis C6786] Length = 246 Score = 93.2 bits (230), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 47/126 (37%), Positives = 76/126 (60%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + + L +T A + E VRSG+ A+PRGQ A +A+G T + R VLLP A R I+P Sbjct: 111 FTASIVCLGLFTGARVCEQVRSGINALPRGQRAAGLAMGFTQWQTYRYVLLPVAYRIIVP 170 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PLTS++LN+ KNS++A +G DL + +++ T Q E + Y+ +++++ FM Sbjct: 171 PLTSEFLNIFKNSAVASTIGLLDLSAQARQLVDYTAQTYESFIAVTLAYVIINLVVMSFM 230 Query: 386 NRLNAK 391 + +K Sbjct: 231 RWVESK 236 Score = 42.4 bits (98), Expect = 0.14, Method: Compositional matrix adjust. Identities = 26/77 (33%), Positives = 42/77 (54%) Query: 81 SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140 ++Y ++ GF T ++ + + A ++G+L G R NK ++ I VYV +FRNIP Sbjct: 18 EPTTYLGWLMSGFWVTVKVSLAAWLIALVVGSLFGVLRTVPNKWLSAIGTVYVSIFRNIP 77 Query: 141 PLVVIFFLYKSVLSVLP 157 +V F Y V +LP Sbjct: 78 LIVQFFVWYLVVPELLP 94 >gi|167628305|ref|YP_001678804.1| glutamine abc transporter, glutamine-binding protein, putative [Heliobacterium modesticaldum Ice1] gi|167591045|gb|ABZ82793.1| glutamine abc transporter, glutamine-binding protein, putative [Heliobacterium modesticaldum Ice1] Length = 220 Score = 93.2 bits (230), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 64/203 (31%), Positives = 107/203 (52%), Gaps = 20/203 (9%) Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL-IFGLPTLVLIALKYQLHFDKPVL 251 SF GIV+ A R+SR+ P L FL + L L LI L + +F P + Sbjct: 36 SFFFGIVIC--ALRISRY---------PFLRYPAFLYVESLRNLPLILLIFFTYFALPKI 84 Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311 G +G P+F + +A + +T+A +AEI+R G+ +VP+GQ EAA A G T+ + Sbjct: 85 G----LG----LPKFWAAVVAFTIFTSALVAEIIRGGIQSVPKGQWEAARAQGFTYLETM 136 Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371 ++LPQA+R +IPPL SQ++ L K++S A +G +L G I + +++ Sbjct: 137 VYIILPQALRKMIPPLISQFITLTKDTSYASIIGLTELTEHGKLIFIEHNNPVQVFFFVA 196 Query: 372 FIYLSLSIMIALFMNRLNAKIAL 394 IY ++ ++ + ++A+ Sbjct: 197 CIYFVVNFTLSRLGMYMEKRMAI 219 >gi|322411345|gb|EFY02253.1| amino acid ABC transporter, permease protein [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957] Length = 233 Score = 93.2 bits (230), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 48/126 (38%), Positives = 75/126 (59%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 FM+ + Y AA+IAE++RSG+ AVP+GQ EAA++ G T + L+++PQA+R+I+P Sbjct: 101 FMTTVCCVGLYHAAYIAEVIRSGIEAVPKGQTEAALSQGFTRLQTMSLIIIPQAVRTILP 160 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PLT+Q +NL+KN+S+ + ADL+ T + F+Y L IA+F Sbjct: 161 PLTNQVVNLIKNTSIVAIISGADLMFTAKVWAYDTTYYVPAFAGAAFLYFILCFPIAIFG 220 Query: 386 NRLNAK 391 R + Sbjct: 221 RRQEER 226 >gi|222152718|ref|YP_002561894.1| amino acid ABC transporter permease [Streptococcus uberis 0140J] gi|222113530|emb|CAR41316.1| putative amino acid ABC transporter, permease protein [Streptococcus uberis 0140J] Length = 233 Score = 93.2 bits (230), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 49/126 (38%), Positives = 82/126 (65%), Gaps = 9/126 (7%) Query: 234 TLVLIALKY-QLHFDKPVLGQFNFI--------GGSTVSPEFMSLYIALSCYTAAFIAEI 284 TL IA Y +L+ + P+L QF F+ G + F + + + Y A+IAE+ Sbjct: 60 TLKAIARVYVELYQNTPLLVQFVFVYYGLAIISNGLIMISTFFTAVLCVGIYHGAYIAEV 119 Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344 +RSG+ AVP+GQ+EAA++ G T+ + L++LPQA+R+I+PP+T+Q +NL+KN+S+ + Sbjct: 120 IRSGIEAVPKGQIEAALSQGFTYEQTMSLIVLPQAVRTILPPMTNQVVNLIKNTSVVAII 179 Query: 345 GFADLV 350 AD++ Sbjct: 180 SGADIM 185 Score = 37.4 bits (85), Expect = 4.5, Method: Compositional matrix adjust. Identities = 22/58 (37%), Positives = 35/58 (60%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 F+ T ++F ++ A ++G L GA S +K + I RVYVE+++N P LV F+Y Sbjct: 28 AFLYTLGMSFLALLLALVLGILFGAMSTSKHKTLKAIARVYVELYQNTPLLVQFVFVY 85 >gi|315029877|gb|EFT41809.1| ABC transporter, permease protein [Enterococcus faecalis TX4000] Length = 722 Score = 93.2 bits (230), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 64/209 (30%), Positives = 111/209 (53%), Gaps = 29/209 (13%) Query: 190 FVFSFVLGIVLSLF------ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243 FV + ++G++ LF A R+ + + +PL+ ++ F+ FGLP Sbjct: 536 FVLALIVGVIFGLFSVSPIKALRVLSTIYVDLIRGIPLMVLAFFIYFGLPG--------- 586 Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 VLG FN P F++ I L+ +A+I+EIVR G+ AVP GQMEA+ +L Sbjct: 587 ------VLG-FNI-------PVFIAGIITLTLNASAYISEIVRGGIKAVPVGQMEASRSL 632 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363 GL++ + + ++LPQA+R +IP +Q++ LK++++ A+G +L+ G I+ +T Q+ Sbjct: 633 GLSYNRTMQKIILPQAIRIMIPSFINQFVISLKDTTILSAIGLIELLQTGKIIVARTLQS 692 Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392 + + IYL L + L K+ Sbjct: 693 TMVYFVIALIYLILITSLTKLAKNLEKKV 721 >gi|299068866|emb|CBJ40107.1| putative amino acid transmembrane ABC transporter protein [Ralstonia solanacearum CMR15] Length = 262 Score = 93.2 bits (230), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 48/134 (35%), Positives = 85/134 (63%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 +F S +AL+ A+ AE +R+GL+AVP+GQ+EAA +LGL+ V+ PQA + + Sbjct: 128 DFTSACVALAFNAGAYNAESIRAGLLAVPKGQLEAAHSLGLSRWHTFADVIFPQAFKVAL 187 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 PPL + +++LLK+SSLA A+G +L +VG + T Q + ++ IYL+L+ ++ F Sbjct: 188 PPLVNNFISLLKDSSLAYAIGVVELTNVGNRLQAATFQPLPALVTTAVIYLALTTVLTQF 247 Query: 385 MNRLNAKIALKEKK 398 N + ++ ++ ++ Sbjct: 248 SNAVEQRMDVEGRR 261 >gi|315173030|gb|EFU17047.1| ABC transporter, permease protein [Enterococcus faecalis TX1346] Length = 722 Score = 93.2 bits (230), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 64/209 (30%), Positives = 111/209 (53%), Gaps = 29/209 (13%) Query: 190 FVFSFVLGIVLSLF------ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243 FV + ++G++ LF A R+ + + +PL+ ++ F+ FGLP Sbjct: 536 FVLALIVGVIFGLFSVSPIKALRVLSTIYVDLIRGIPLMVLAFFIYFGLPG--------- 586 Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 VLG FN P F++ I L+ +A+I+EIVR G+ AVP GQMEA+ +L Sbjct: 587 ------VLG-FNI-------PVFIAGIITLTLNASAYISEIVRGGIKAVPVGQMEASRSL 632 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363 GL++ + + ++LPQA+R +IP +Q++ LK++++ A+G +L+ G I+ +T Q+ Sbjct: 633 GLSYNRTMQKIILPQAIRIMIPSFINQFVISLKDTTILSAIGLIELLQTGKIIVARTLQS 692 Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392 + + IYL L + L K+ Sbjct: 693 TMVYFVIALIYLILITSLTKLAKNLEKKV 721 >gi|149909833|ref|ZP_01898484.1| hypothetical amino acid ABC transporter, permease protein [Moritella sp. PE36] gi|149807165|gb|EDM67121.1| hypothetical amino acid ABC transporter, permease protein [Moritella sp. PE36] Length = 315 Score = 93.2 bits (230), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 45/125 (36%), Positives = 77/125 (61%) Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 ALS +T A+IAEI+RSG+ ++ GQMEAA +LG+++ KA V+LPQA + +PP+ Q+ Sbjct: 191 ALSVFTGAYIAEIIRSGIQSISPGQMEAARSLGMSYPKAMIYVILPQAFKRTLPPMAGQF 250 Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 +NL+K+SSL + DL G ++ + E+ +YL L+ ++ + R+ + Sbjct: 251 INLIKDSSLVSVISITDLTKAGREVVAGSFATFEVWFAVAALYLVLTSTLSFGVQRIEKR 310 Query: 392 IALKE 396 +A + Sbjct: 311 LATSD 315 >gi|56807700|ref|ZP_00365576.1| COG0834: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Streptococcus pyogenes M49 591] Length = 401 Score = 93.2 bits (230), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 55/176 (31%), Positives = 97/176 (55%), Gaps = 17/176 (9%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 + +PL+ ++ F+ +G+P L+ +Q P+ +F++ IALS Sbjct: 242 RGIPLMIVAAFIFWGVPNLIESMTGHQ----SPI-------------NDFLAATIALSLN 284 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 A+IAEIVR G+ AVP GQMEA+ +LGL++ R V+LPQA++ ++P +Q++ LK Sbjct: 285 GGAYIAEIVRGGIEAVPAGQMEASRSLGLSYGTTMRKVILPQAVKLMLPNFINQFVISLK 344 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 ++++ A+G +L G II + Q+ + I IYL + ++ RL ++ Sbjct: 345 DTTIVSAIGLVELFQTGKIIIARNYQSFRMYAILAIIYLIMITLLTRLAKRLEKRL 400 >gi|197337095|ref|YP_002157986.1| amino acid ABC transporter permease protein [Vibrio fischeri MJ11] gi|197314347|gb|ACH63796.1| amino acid ABC transporter permease protein [Vibrio fischeri MJ11] Length = 264 Score = 93.2 bits (230), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 77/232 (33%), Positives = 116/232 (50%), Gaps = 22/232 (9%) Query: 165 LPFGMFLNNRGLSFPTLTMD---TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221 +P +F G FP ++ KI S + + ++L T L R + GK + Sbjct: 45 VPDFIFFYEDGEWFPAELIEGLLVTLKISAISAIATLTIALI-TALLRLSNSIVGKTIST 103 Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281 LYI LI P LV I L Y + P LG F + +AL+ + A+ Sbjct: 104 LYIE--LIRNTPLLVQIYLLYFVF--GPFLGL----------DRFTTAVLALALFQGAYT 149 Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341 AEI+RSGLI +P+GQ EA LGL+ + R V+LPQ +R +P LT++ ++L+KNSS+ Sbjct: 150 AEILRSGLINLPKGQFEACKTLGLSQFNSYRYVVLPQVIRKTLPSLTNELVSLVKNSSIV 209 Query: 342 VAVGFADLVSVGGTIINQTGQAIEIIL----IWMFIYLSLSIMIALFMNRLN 389 + DL + G I++ T EI I++ I LSLS + A R++ Sbjct: 210 SVMAIFDLTTEGRNIVSDTAMPFEIWFTVAAIYLMITLSLSALSAWLEYRMH 261 >gi|29375354|ref|NP_814508.1| amino acid ABC transporter, amino acid-binding/permease protein [Enterococcus faecalis V583] gi|227554876|ref|ZP_03984923.1| amino acid ABC superfamily ATP binding cassette transporter protein [Enterococcus faecalis HH22] gi|256761528|ref|ZP_05502108.1| amino acid ABC transporter [Enterococcus faecalis T3] gi|257081023|ref|ZP_05575384.1| ABC-type amino acid transport/signal transduction protein system [Enterococcus faecalis E1Sol] gi|257083683|ref|ZP_05578044.1| ABC-type amino acid transport/signal transduction system [Enterococcus faecalis Fly1] gi|257418368|ref|ZP_05595362.1| ABC amino acid transporter [Enterococcus faecalis T11] gi|29342814|gb|AAO80578.1| amino acid ABC transporter, amino acid-binding/permease protein [Enterococcus faecalis V583] gi|227175989|gb|EEI56961.1| amino acid ABC superfamily ATP binding cassette transporter protein [Enterococcus faecalis HH22] gi|256682779|gb|EEU22474.1| amino acid ABC transporter [Enterococcus faecalis T3] gi|256989053|gb|EEU76355.1| ABC-type amino acid transport/signal transduction protein system [Enterococcus faecalis E1Sol] gi|256991713|gb|EEU79015.1| ABC-type amino acid transport/signal transduction system [Enterococcus faecalis Fly1] gi|257160196|gb|EEU90156.1| ABC amino acid transporter [Enterococcus faecalis T11] gi|315573457|gb|EFU85648.1| ABC transporter, permease protein [Enterococcus faecalis TX0309B] gi|315581418|gb|EFU93609.1| ABC transporter, permease protein [Enterococcus faecalis TX0309A] Length = 722 Score = 93.2 bits (230), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 64/209 (30%), Positives = 111/209 (53%), Gaps = 29/209 (13%) Query: 190 FVFSFVLGIVLSLF------ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243 FV + ++G++ LF A R+ + + +PL+ ++ F+ FGLP Sbjct: 536 FVLALIVGVIFGLFSVSPIKALRVLSTIYVDLIRGIPLMVLAFFIYFGLPG--------- 586 Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 VLG FN P F++ I L+ +A+I+EIVR G+ AVP GQMEA+ +L Sbjct: 587 ------VLG-FNI-------PVFIAGIITLTLNASAYISEIVRGGIKAVPVGQMEASRSL 632 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363 GL++ + + ++LPQA+R +IP +Q++ LK++++ A+G +L+ G I+ +T Q+ Sbjct: 633 GLSYNRTMQKIILPQAIRIMIPSFINQFVISLKDTTILSAIGLIELLQTGKIIVARTLQS 692 Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392 + + IYL L + L K+ Sbjct: 693 TMVYFVIALIYLILITSLTKLAKNLEKKV 721 >gi|307296217|ref|ZP_07576045.1| ABC transporter, permease protein [Enterococcus faecalis TX0411] gi|306496091|gb|EFM65673.1| ABC transporter, permease protein [Enterococcus faecalis TX0411] gi|315159996|gb|EFU04013.1| ABC transporter, permease protein [Enterococcus faecalis TX0312] Length = 722 Score = 93.2 bits (230), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 64/209 (30%), Positives = 111/209 (53%), Gaps = 29/209 (13%) Query: 190 FVFSFVLGIVLSLF------ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243 FV + ++G++ LF A R+ + + +PL+ ++ F+ FGLP Sbjct: 536 FVLALIVGVIFGLFSVSPIKALRVLSTIYVDLIRGIPLMVLAFFIYFGLPG--------- 586 Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 VLG FN P F++ I L+ +A+I+EIVR G+ AVP GQMEA+ +L Sbjct: 587 ------VLG-FNI-------PVFIAGIITLTLNASAYISEIVRGGIKAVPVGQMEASRSL 632 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363 GL++ + + ++LPQA+R +IP +Q++ LK++++ A+G +L+ G I+ +T Q+ Sbjct: 633 GLSYNRTMQKIILPQAIRIMIPSFINQFVISLKDTTILSAIGLIELLQTGKIIVARTLQS 692 Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392 + + IYL L + L K+ Sbjct: 693 TMVYFVIALIYLILITSLTKLAKNLEKKV 721 >gi|121593037|ref|YP_984933.1| polar amino acid ABC transporter inner membrane subunit [Acidovorax sp. JS42] gi|222109805|ref|YP_002552069.1| polar amino acid ABC transporter inner membrane subunit [Acidovorax ebreus TPSY] gi|120605117|gb|ABM40857.1| amino acid ABC transporter membrane protein 1, PAAT family [Acidovorax sp. JS42] gi|221729249|gb|ACM32069.1| polar amino acid ABC transporter, inner membrane subunit [Acidovorax ebreus TPSY] Length = 250 Score = 93.2 bits (230), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 58/134 (43%), Positives = 80/134 (59%), Gaps = 4/134 (2%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P F+ + AL +T+A IAE VRSG+ A+PRGQ A +ALG T + R VLLP A R I Sbjct: 109 PGFVLVVFALGFFTSARIAEQVRSGIQALPRGQRYAGMALGFTTFQYYRYVLLPMAFRII 168 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 IPPLTS+ +N+ KNSS+A AV A+L +T + IE+ L +L I+ A Sbjct: 169 IPPLTSETMNVFKNSSVAFAVSVAELTMFAMQAQEETSRGIEVYL----AVTALYIISAF 224 Query: 384 FMNRLNAKIALKEK 397 +NR+ A I + + Sbjct: 225 AINRIMAFIEKRTR 238 Score = 40.0 bits (92), Expect = 0.59, Method: Compositional matrix adjust. Identities = 29/90 (32%), Positives = 44/90 (48%), Gaps = 5/90 (5%) Query: 71 EIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICR 130 E+ Q D +Y +L + T ++ + A ++G+LVG R + W R Sbjct: 16 EVGQSCFGKNGDITYLDWMLSAWGWTVSVSLLSLAVALVVGSLVGTLRTLEGR--PWTVR 73 Query: 131 V---YVEVFRNIPPLVVIFFLYKSVLSVLP 157 + +VE+FRNIP LV IF Y V S+ P Sbjct: 74 LGNAWVELFRNIPLLVHIFVWYHVVPSIFP 103 >gi|238923861|ref|YP_002937377.1| amino acid ABC transporter, permease protein [Eubacterium rectale ATCC 33656] gi|238875536|gb|ACR75243.1| amino acid ABC transporter, permease protein [Eubacterium rectale ATCC 33656] Length = 508 Score = 93.2 bits (230), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 64/211 (30%), Positives = 119/211 (56%), Gaps = 25/211 (11%) Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTG-----KALPLLYISTFLIFGLPTLVLIALKYQ 243 I +F+ +LGIVL F + R H++ G + Y++ +I G P ++ + + Y Sbjct: 311 ITIFAVMLGIVLG-FLIAIVRTSHDRNGGLAILNGICKAYLT--IIRGTPVMIQLLIIY- 366 Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 ++ ++V+ + + IA +AA++AEIVRSG+++V GQ EA +L Sbjct: 367 ------------YVVLASVTNKILVAVIAFGLNSAAYVAEIVRSGIMSVDIGQFEAGRSL 414 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363 GL +R+ +LV++PQA+++I+P L +++++LLK +S++ +G DL G I + T +A Sbjct: 415 GLNYRQTMKLVIIPQAVKNILPALLNEFISLLKETSISGYIGMMDLTKGGDIIRSNTYEA 474 Query: 364 ----IEIILIWMFIYLSLSIMIALFMNRLNA 390 I + LI++ I + LS ++ RL + Sbjct: 475 FIPLIAVALIYLVIVMLLSHGVSKLERRLRS 505 >gi|227517724|ref|ZP_03947773.1| amino acid ABC superfamily ATP binding cassette transporter, amino acid-binding/permease protein [Enterococcus faecalis TX0104] gi|229546597|ref|ZP_04435322.1| amino acid ABC superfamily ATP binding cassette transporter, amino acid-binding/permease protein [Enterococcus faecalis TX1322] gi|229548704|ref|ZP_04437429.1| amino acid ABC superfamily ATP binding cassette transporter, amino acid-binding/permease protein [Enterococcus faecalis ATCC 29200] gi|255971218|ref|ZP_05421804.1| amino acid ABC transporter [Enterococcus faecalis T1] gi|255973841|ref|ZP_05424427.1| aminoacid ABC transporter [Enterococcus faecalis T2] gi|256617647|ref|ZP_05474493.1| ABC-type amino acid transport/signal transduction system [Enterococcus faecalis ATCC 4200] gi|256854374|ref|ZP_05559738.1| amino acid ABC transporter [Enterococcus faecalis T8] gi|256957372|ref|ZP_05561543.1| ABC-type amino acid transport/signal transduction system [Enterococcus faecalis DS5] gi|256959892|ref|ZP_05564063.1| ABC-type amino acid transport/signal transduction system [Enterococcus faecalis Merz96] gi|257086118|ref|ZP_05580479.1| ABC-type amino acid transport/signal transduction system [Enterococcus faecalis D6] gi|257089189|ref|ZP_05583550.1| ABC amino acid transporter [Enterococcus faecalis CH188] gi|257415331|ref|ZP_05592325.1| ABC-type amino acid transport/signal transduction system [Enterococcus faecalis AR01/DG] gi|257421017|ref|ZP_05598007.1| ABC amino acid transporter [Enterococcus faecalis X98] gi|293384723|ref|ZP_06630577.1| glutamine ABC transporter, glutamine-binding protein/permease protein [Enterococcus faecalis R712] gi|293387465|ref|ZP_06632017.1| glutamine ABC transporter, glutamine-binding protein/permease protein [Enterococcus faecalis S613] gi|294781574|ref|ZP_06746911.1| ABC transporter, permease protein [Enterococcus faecalis PC1.1] gi|300862075|ref|ZP_07108155.1| ABC transporter, permease protein [Enterococcus faecalis TUSoD Ef11] gi|307269814|ref|ZP_07551144.1| ABC transporter, permease protein [Enterococcus faecalis TX4248] gi|307276261|ref|ZP_07557389.1| ABC transporter, permease protein [Enterococcus faecalis TX2134] gi|307284476|ref|ZP_07564638.1| ABC transporter, permease protein [Enterococcus faecalis TX0860] gi|307289545|ref|ZP_07569490.1| ABC transporter, permease protein [Enterococcus faecalis TX0109] gi|312900356|ref|ZP_07759667.1| ABC transporter, permease protein [Enterococcus faecalis TX0470] gi|312904217|ref|ZP_07763379.1| ABC transporter, permease protein [Enterococcus faecalis TX0635] gi|312908578|ref|ZP_07767521.1| ABC transporter, permease protein [Enterococcus faecalis DAPTO 512] gi|312910503|ref|ZP_07769348.1| ABC transporter, permease protein [Enterococcus faecalis DAPTO 516] gi|312951870|ref|ZP_07770759.1| ABC transporter, permease protein [Enterococcus faecalis TX0102] gi|227074829|gb|EEI12792.1| amino acid ABC superfamily ATP binding cassette transporter, amino acid-binding/permease protein [Enterococcus faecalis TX0104] gi|229306170|gb|EEN72166.1| amino acid ABC superfamily ATP binding cassette transporter, amino acid-binding/permease protein [Enterococcus faecalis ATCC 29200] gi|229308287|gb|EEN74274.1| amino acid ABC superfamily ATP binding cassette transporter, amino acid-binding/permease protein [Enterococcus faecalis TX1322] gi|255962236|gb|EET94712.1| amino acid ABC transporter [Enterococcus faecalis T1] gi|255966713|gb|EET97335.1| aminoacid ABC transporter [Enterococcus faecalis T2] gi|256597174|gb|EEU16350.1| ABC-type amino acid transport/signal transduction system [Enterococcus faecalis ATCC 4200] gi|256709934|gb|EEU24978.1| amino acid ABC transporter [Enterococcus faecalis T8] gi|256947868|gb|EEU64500.1| ABC-type amino acid transport/signal transduction system [Enterococcus faecalis DS5] gi|256950388|gb|EEU67020.1| ABC-type amino acid transport/signal transduction system [Enterococcus faecalis Merz96] gi|256994148|gb|EEU81450.1| ABC-type amino acid transport/signal transduction system [Enterococcus faecalis D6] gi|256998001|gb|EEU84521.1| ABC amino acid transporter [Enterococcus faecalis CH188] gi|257157159|gb|EEU87119.1| ABC-type amino acid transport/signal transduction system [Enterococcus faecalis ARO1/DG] gi|257162841|gb|EEU92801.1| ABC amino acid transporter [Enterococcus faecalis X98] gi|291077973|gb|EFE15337.1| glutamine ABC transporter, glutamine-binding protein/permease protein [Enterococcus faecalis R712] gi|291083116|gb|EFE20079.1| glutamine ABC transporter, glutamine-binding protein/permease protein [Enterococcus faecalis S613] gi|294451352|gb|EFG19817.1| ABC transporter, permease protein [Enterococcus faecalis PC1.1] gi|295114022|emb|CBL32659.1| amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-)/amino acid ABC transporter membrane protein, PAAT family (TC 3.A.1.3.-) [Enterococcus sp. 7L76] gi|300848600|gb|EFK76357.1| ABC transporter, permease protein [Enterococcus faecalis TUSoD Ef11] gi|306499506|gb|EFM68878.1| ABC transporter, permease protein [Enterococcus faecalis TX0109] gi|306503153|gb|EFM72407.1| ABC transporter, permease protein [Enterococcus faecalis TX0860] gi|306507061|gb|EFM76203.1| ABC transporter, permease protein [Enterococcus faecalis TX2134] gi|306513924|gb|EFM82526.1| ABC transporter, permease protein [Enterococcus faecalis TX4248] gi|310625464|gb|EFQ08747.1| ABC transporter, permease protein [Enterococcus faecalis DAPTO 512] gi|310630168|gb|EFQ13451.1| ABC transporter, permease protein [Enterococcus faecalis TX0102] gi|310632313|gb|EFQ15596.1| ABC transporter, permease protein [Enterococcus faecalis TX0635] gi|311289199|gb|EFQ67755.1| ABC transporter, permease protein [Enterococcus faecalis DAPTO 516] gi|311292544|gb|EFQ71100.1| ABC transporter, permease protein [Enterococcus faecalis TX0470] gi|315025741|gb|EFT37673.1| ABC transporter, permease protein [Enterococcus faecalis TX2137] gi|315031474|gb|EFT43406.1| ABC transporter, permease protein [Enterococcus faecalis TX0017] gi|315036139|gb|EFT48071.1| ABC transporter, permease protein [Enterococcus faecalis TX0027] gi|315145263|gb|EFT89279.1| ABC transporter, permease protein [Enterococcus faecalis TX2141] gi|315148141|gb|EFT92157.1| ABC transporter, permease protein [Enterococcus faecalis TX4244] gi|315151540|gb|EFT95556.1| ABC transporter, permease protein [Enterococcus faecalis TX0012] gi|315153184|gb|EFT97200.1| ABC transporter, permease protein [Enterococcus faecalis TX0031] gi|315154902|gb|EFT98918.1| ABC transporter, permease protein [Enterococcus faecalis TX0043] gi|315161961|gb|EFU05978.1| ABC transporter, permease protein [Enterococcus faecalis TX0645] gi|315164648|gb|EFU08665.1| ABC transporter, permease protein [Enterococcus faecalis TX1302] gi|315170674|gb|EFU14691.1| ABC transporter, permease protein [Enterococcus faecalis TX1342] gi|315578044|gb|EFU90235.1| ABC transporter, permease protein [Enterococcus faecalis TX0630] gi|323479955|gb|ADX79394.1| ABC-type amino acid transport/signal transduction system [Enterococcus faecalis 62] gi|327534349|gb|AEA93183.1| amino acid ABC superfamily ATP binding cassette transporter, binding/permease protein [Enterococcus faecalis OG1RF] gi|329577603|gb|EGG59036.1| ABC transporter, permease protein [Enterococcus faecalis TX1467] Length = 722 Score = 93.2 bits (230), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 64/209 (30%), Positives = 111/209 (53%), Gaps = 29/209 (13%) Query: 190 FVFSFVLGIVLSLF------ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243 FV + ++G++ LF A R+ + + +PL+ ++ F+ FGLP Sbjct: 536 FVLALIVGVIFGLFSVSPIKALRVLSTIYVDLIRGIPLMVLAFFIYFGLPG--------- 586 Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 VLG FN P F++ I L+ +A+I+EIVR G+ AVP GQMEA+ +L Sbjct: 587 ------VLG-FNI-------PVFIAGIITLTLNASAYISEIVRGGIKAVPVGQMEASRSL 632 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363 GL++ + + ++LPQA+R +IP +Q++ LK++++ A+G +L+ G I+ +T Q+ Sbjct: 633 GLSYNRTMQKIILPQAIRIMIPSFINQFVISLKDTTILSAIGLIELLQTGKIIVARTLQS 692 Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392 + + IYL L + L K+ Sbjct: 693 TMVYFVIALIYLILITSLTKLAKNLEKKV 721 >gi|121609959|ref|YP_997766.1| polar amino acid ABC transporter inner membrane subunit [Verminephrobacter eiseniae EF01-2] gi|121554599|gb|ABM58748.1| polar amino acid ABC transporter, inner membrane subunit [Verminephrobacter eiseniae EF01-2] Length = 221 Score = 93.2 bits (230), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 44/129 (34%), Positives = 84/129 (65%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P F+ + L Y+ A+++EIVR + ++ +GQMEAA +LG++ KA R ++LPQA+ + Sbjct: 87 PAFLCGVLGLGIYSGAYVSEIVRGAIQSIDKGQMEAARSLGMSSGKAMRTIILPQAVVRM 146 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 IPPL ++++ L+KNS+L + ADL+ G II+ + +++E+ L +YL L+ + + Sbjct: 147 IPPLGNEFIALIKNSALVSLLTIADLMHEGQKIISVSYRSLEVYLAVALVYLVLTTLTGM 206 Query: 384 FMNRLNAKI 392 + ++ ++ Sbjct: 207 ALQKVEQRL 215 >gi|323706491|ref|ZP_08118051.1| polar amino acid ABC transporter, inner membrane subunit [Thermoanaerobacterium xylanolyticum LX-11] gi|323534153|gb|EGB23944.1| polar amino acid ABC transporter, inner membrane subunit [Thermoanaerobacterium xylanolyticum LX-11] Length = 220 Score = 93.2 bits (230), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 47/135 (34%), Positives = 87/135 (64%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P F+ IALS +A ++AEI+RSG+ AV GQMEA+ +LG++H A R V++PQA+++I Sbjct: 86 PGFVVGIIALSMNSAGYVAEIIRSGIQAVDPGQMEASRSLGMSHSMAMRYVIIPQAIKNI 145 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 +P L ++++ +LK SS+ +GFADL + + T +A E ++I IY ++++ + Sbjct: 146 LPALGNEFVVMLKESSIVSVIGFADLTRQAEIVSSVTYRAFEPLIIIAAIYFVMTLVFSR 205 Query: 384 FMNRLNAKIALKEKK 398 +++ ++ + + Sbjct: 206 LLSKFERRLRTGDTR 220 >gi|134280169|ref|ZP_01766880.1| glutamate/aspartate ABC transporter, permease protein GltJ [Burkholderia pseudomallei 305] gi|134248176|gb|EBA48259.1| glutamate/aspartate ABC transporter, permease protein GltJ [Burkholderia pseudomallei 305] Length = 246 Score = 93.2 bits (230), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 46/126 (36%), Positives = 76/126 (60%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + + L +T A + E VRSG+ A+P+GQ A +A+G T + R VLLP A R I+P Sbjct: 111 FTASIVCLGLFTGARVCEQVRSGINALPKGQRAAGLAMGFTQWQTYRYVLLPVAYRIIVP 170 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PLTS++LN+ KNS++A +G DL + +++ T Q E + Y+ +++++ FM Sbjct: 171 PLTSEFLNIFKNSAVASTIGLLDLSAQARQLVDYTAQTYESFIAVTLAYVVINLIVMTFM 230 Query: 386 NRLNAK 391 + +K Sbjct: 231 RWVESK 236 Score = 42.4 bits (98), Expect = 0.13, Method: Compositional matrix adjust. Identities = 26/78 (33%), Positives = 42/78 (53%) Query: 81 SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140 ++Y ++ GF T ++ + A ++G+L G R NK ++ I VYV +FRNIP Sbjct: 18 EPTTYLGWLMSGFWVTVKVSLVAWVIALVVGSLFGVLRTVPNKWLSAIGTVYVSIFRNIP 77 Query: 141 PLVVIFFLYKSVLSVLPI 158 +V F Y V +LP+ Sbjct: 78 LIVQFFVWYLVVPELLPV 95 >gi|37524240|ref|NP_927584.1| hypothetical protein plu0220 [Photorhabdus luminescens subsp. laumondii TTO1] gi|36783663|emb|CAE12515.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii TTO1] Length = 245 Score = 93.2 bits (230), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 49/115 (42%), Positives = 74/115 (64%), Gaps = 2/115 (1%) Query: 253 QFNFIGGSTVSP--EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 + N +G S P EF++ +I L+ Y+A F+AE +R+G+ + RGQ AA ALGLT +A Sbjct: 99 EINLLGLSLAWPSFEFLAGFIGLTLYSAPFVAEELRAGIQGIGRGQKYAAHALGLTGWQA 158 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365 R V+LPQA++ PPL QY+N++KNSSL +A+G A+L + +T + E Sbjct: 159 MRYVVLPQALKIATPPLLGQYMNIVKNSSLTMAIGVAELSYASRQVETETLKTFE 213 Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 25/74 (33%), Positives = 42/74 (56%) Query: 84 SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143 Y + GF+ T W++ +I +T++G ++ A R S K++ W+ Y +FRN P LV Sbjct: 14 QYLGWLWQGFLITLWISACTVIASTLLGFVLAAARDSQLKILRWLVTAYTTLFRNTPLLV 73 Query: 144 VIFFLYKSVLSVLP 157 +FF Y + +LP Sbjct: 74 QLFFWYFASGQILP 87 >gi|256964404|ref|ZP_05568575.1| ABC-type amino acid transport/signal transduction system [Enterococcus faecalis HIP11704] gi|307272573|ref|ZP_07553826.1| ABC transporter, permease protein [Enterococcus faecalis TX0855] gi|256954900|gb|EEU71532.1| ABC-type amino acid transport/signal transduction system [Enterococcus faecalis HIP11704] gi|306510858|gb|EFM79875.1| ABC transporter, permease protein [Enterococcus faecalis TX0855] Length = 722 Score = 93.2 bits (230), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 64/209 (30%), Positives = 111/209 (53%), Gaps = 29/209 (13%) Query: 190 FVFSFVLGIVLSLF------ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243 FV + ++G++ LF A R+ + + +PL+ ++ F+ FGLP Sbjct: 536 FVLALIVGVIFGLFSVSPIKALRVLSTIYVDLIRGIPLMVLAFFIYFGLPG--------- 586 Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 VLG FN P F++ I L+ +A+I+EIVR G+ AVP GQMEA+ +L Sbjct: 587 ------VLG-FNI-------PVFIAGIITLTLNASAYISEIVRGGIKAVPVGQMEASRSL 632 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363 GL++ + + ++LPQA+R +IP +Q++ LK++++ A+G +L+ G I+ +T Q+ Sbjct: 633 GLSYNRTMQKIILPQAIRIMIPSFINQFVISLKDTTILSAIGLIELLQTGKIIVARTLQS 692 Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392 + + IYL L + L K+ Sbjct: 693 TMVYFVIALIYLILITSLTKLAKNLEKKV 721 >gi|238787849|ref|ZP_04631646.1| Binding-protein-dependent transport system inner membrane component [Yersinia frederiksenii ATCC 33641] gi|238724192|gb|EEQ15835.1| Binding-protein-dependent transport system inner membrane component [Yersinia frederiksenii ATCC 33641] Length = 245 Score = 93.2 bits (230), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 46/96 (47%), Positives = 68/96 (70%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 EF++ +I L+ Y+ AFIAE +RSG+ V +GQ AA ALGLT ++ R V+LPQA++ + Sbjct: 113 EFLAGFIGLTLYSTAFIAEELRSGISGVAKGQKYAAHALGLTGWQSMRHVVLPQALKIAL 172 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 PPL QY+N++KNSSLA+A+G A+L + +T Sbjct: 173 PPLLGQYMNIIKNSSLAMAIGVAELSYASRQVETET 208 Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 38/126 (30%), Positives = 64/126 (50%), Gaps = 17/126 (13%) Query: 84 SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143 Y + + GF+ T W++ ++ AT++G L+ A R S K + W Y +FRN P L+ Sbjct: 14 QYLSWLWDGFLLTLWISACTVVAATLLGFLLAAARDSELKALQWFAIGYSTLFRNTPLLI 73 Query: 144 VIFFLYKSVLSVLP---IPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIV- 199 +FF Y + +LP IP + P + + N LS+P+ F F+ G + Sbjct: 74 QLFFWYFAASQLLPTSWIP--WLNTPHEITVFNLTLSWPS-----------FEFLAGFIG 120 Query: 200 LSLFAT 205 L+L++T Sbjct: 121 LTLYST 126 >gi|53720531|ref|YP_109517.1| glutamate/aspartate transport system permease [Burkholderia pseudomallei K96243] gi|67643523|ref|ZP_00442268.1| glutamate/aspartate transport system permease protein GltJ [Burkholderia mallei GB8 horse 4] gi|76811358|ref|YP_334804.1| glutamate/aspartate transport system permease [Burkholderia pseudomallei 1710b] gi|121598614|ref|YP_991700.1| glutamate/aspartate ABC transporter, permease protein GltJ [Burkholderia mallei SAVP1] gi|124386224|ref|YP_001027195.1| glutamate/aspartate ABC transporter, permease protein GltJ [Burkholderia mallei NCTC 10229] gi|126439941|ref|YP_001060406.1| glutamate/aspartate ABC transporter, permease protein GltJ [Burkholderia pseudomallei 668] gi|126449942|ref|YP_001082147.1| glutamate/aspartate ABC transporter, permease protein GltJ [Burkholderia mallei NCTC 10247] gi|126454005|ref|YP_001067667.1| glutamate/aspartate ABC transporter, permease protein GltJ [Burkholderia pseudomallei 1106a] gi|166998512|ref|ZP_02264370.1| glutamate/aspartate ABC transporter, permease protein GltJ [Burkholderia mallei PRL-20] gi|167721208|ref|ZP_02404444.1| glutamate/aspartate ABC transporter, permease protein GltJ [Burkholderia pseudomallei DM98] gi|167740180|ref|ZP_02412954.1| glutamate/aspartate ABC transporter, permease protein GltJ [Burkholderia pseudomallei 14] gi|167817395|ref|ZP_02449075.1| glutamate/aspartate ABC transporter, permease protein GltJ [Burkholderia pseudomallei 91] gi|167825801|ref|ZP_02457272.1| glutamate/aspartate ABC transporter, permease protein GltJ [Burkholderia pseudomallei 9] gi|167847285|ref|ZP_02472793.1| glutamate/aspartate ABC transporter, permease protein GltJ [Burkholderia pseudomallei B7210] gi|167895873|ref|ZP_02483275.1| glutamate/aspartate ABC transporter, permease protein GltJ [Burkholderia pseudomallei 7894] gi|167912522|ref|ZP_02499613.1| glutamate/aspartate ABC transporter, permease protein GltJ [Burkholderia pseudomallei 112] gi|167920473|ref|ZP_02507564.1| glutamate/aspartate ABC transporter, permease protein GltJ [Burkholderia pseudomallei BCC215] gi|217420960|ref|ZP_03452465.1| polar amino acid ABC transporter, permease protein, PAAT family [Burkholderia pseudomallei 576] gi|226196826|ref|ZP_03792405.1| glutamate/aspartate ABC transporter, permease protein GltJ [Burkholderia pseudomallei Pakistan 9] gi|237813797|ref|YP_002898248.1| glutamate/aspartate ABC transporter, permease protein GltJ [Burkholderia pseudomallei MSHR346] gi|242316198|ref|ZP_04815214.1| glutamate/aspartate ABC transporter, permease protein GltJ [Burkholderia pseudomallei 1106b] gi|254178933|ref|ZP_04885587.1| glutamate/aspartate ABC transporter, permease protein GltJ [Burkholderia mallei ATCC 10399] gi|254180662|ref|ZP_04887260.1| glutamate/aspartate ABC transporter, permease protein GltJ [Burkholderia pseudomallei 1655] gi|254190905|ref|ZP_04897411.1| glutamate/aspartate ABC transporter, permease protein GltJ [Burkholderia pseudomallei Pasteur 52237] gi|254199044|ref|ZP_04905459.1| glutamate/aspartate ABC transporter, permease protein GltJ [Burkholderia pseudomallei S13] gi|254202700|ref|ZP_04909063.1| glutamate/aspartate ABC transporter, permease protein GltJ [Burkholderia mallei FMH] gi|254208040|ref|ZP_04914390.1| glutamate/aspartate ABC transporter, permease protein GltJ [Burkholderia mallei JHU] gi|254261249|ref|ZP_04952303.1| glutamate/aspartate ABC transporter, permease protein GltJ [Burkholderia pseudomallei 1710a] gi|254299253|ref|ZP_04966703.1| glutamate/aspartate ABC transporter, permease protein GltJ [Burkholderia pseudomallei 406e] gi|52210945|emb|CAH36933.1| glutamate/aspartate transport system permease protein [Burkholderia pseudomallei K96243] gi|76580811|gb|ABA50286.1| glutamate/aspartate transport system permease protein [Burkholderia pseudomallei 1710b] gi|121227424|gb|ABM49942.1| glutamate/aspartate ABC transporter, permease protein GltJ [Burkholderia mallei SAVP1] gi|124294244|gb|ABN03513.1| glutamate/aspartate ABC transporter, permease protein GltJ [Burkholderia mallei NCTC 10229] gi|126219434|gb|ABN82940.1| polar amino acid ABC transporter, permease protein, PAAT family [Burkholderia pseudomallei 668] gi|126227647|gb|ABN91187.1| glutamate/aspartate ABC transporter, permease protein GltJ [Burkholderia pseudomallei 1106a] gi|126242812|gb|ABO05905.1| glutamate/aspartate ABC transporter, permease protein GltJ [Burkholderia mallei NCTC 10247] gi|147746947|gb|EDK54024.1| glutamate/aspartate ABC transporter, permease protein GltJ [Burkholderia mallei FMH] gi|147751934|gb|EDK59001.1| glutamate/aspartate ABC transporter, permease protein GltJ [Burkholderia mallei JHU] gi|157809165|gb|EDO86335.1| glutamate/aspartate ABC transporter, permease protein GltJ [Burkholderia pseudomallei 406e] gi|157938579|gb|EDO94249.1| glutamate/aspartate ABC transporter, permease protein GltJ [Burkholderia pseudomallei Pasteur 52237] gi|160694847|gb|EDP84855.1| glutamate/aspartate ABC transporter, permease protein GltJ [Burkholderia mallei ATCC 10399] gi|169656874|gb|EDS88271.1| glutamate/aspartate ABC transporter, permease protein GltJ [Burkholderia pseudomallei S13] gi|184211201|gb|EDU08244.1| glutamate/aspartate ABC transporter, permease protein GltJ [Burkholderia pseudomallei 1655] gi|217396372|gb|EEC36389.1| polar amino acid ABC transporter, permease protein, PAAT family [Burkholderia pseudomallei 576] gi|225931086|gb|EEH27094.1| glutamate/aspartate ABC transporter, permease protein GltJ [Burkholderia pseudomallei Pakistan 9] gi|237506385|gb|ACQ98703.1| glutamate/aspartate ABC transporter, permease protein GltJ [Burkholderia pseudomallei MSHR346] gi|238524886|gb|EEP88316.1| glutamate/aspartate transport system permease protein GltJ [Burkholderia mallei GB8 horse 4] gi|242139437|gb|EES25839.1| glutamate/aspartate ABC transporter, permease protein GltJ [Burkholderia pseudomallei 1106b] gi|243065197|gb|EES47383.1| glutamate/aspartate ABC transporter, permease protein GltJ [Burkholderia mallei PRL-20] gi|254219938|gb|EET09322.1| glutamate/aspartate ABC transporter, permease protein GltJ [Burkholderia pseudomallei 1710a] Length = 246 Score = 93.2 bits (230), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 46/126 (36%), Positives = 76/126 (60%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + + L +T A + E VRSG+ A+P+GQ A +A+G T + R VLLP A R I+P Sbjct: 111 FTASIVCLGLFTGARVCEQVRSGINALPKGQRAAGLAMGFTQWQTYRYVLLPVAYRIIVP 170 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PLTS++LN+ KNS++A +G DL + +++ T Q E + Y+ +++++ FM Sbjct: 171 PLTSEFLNIFKNSAVASTIGLLDLSAQARQLVDYTAQTYESFIAVTLAYVVINLIVMTFM 230 Query: 386 NRLNAK 391 + +K Sbjct: 231 RWVESK 236 Score = 42.4 bits (98), Expect = 0.13, Method: Compositional matrix adjust. Identities = 26/78 (33%), Positives = 42/78 (53%) Query: 81 SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140 ++Y ++ GF T ++ + A ++G+L G R NK ++ I VYV +FRNIP Sbjct: 18 EPTTYLGWLMSGFWVTVKVSLVAWVIALVVGSLFGVLRTVPNKWLSAIGTVYVSIFRNIP 77 Query: 141 PLVVIFFLYKSVLSVLPI 158 +V F Y V +LP+ Sbjct: 78 LIVQFFVWYLVVPELLPV 95 >gi|315166947|gb|EFU10964.1| ABC transporter, permease protein [Enterococcus faecalis TX1341] Length = 722 Score = 93.2 bits (230), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 64/209 (30%), Positives = 111/209 (53%), Gaps = 29/209 (13%) Query: 190 FVFSFVLGIVLSLF------ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243 FV + ++G++ LF A R+ + + +PL+ ++ F+ FGLP Sbjct: 536 FVLALIVGVIFGLFSVSPIKALRVLSTIYVDLIRGIPLMVLAFFIYFGLPG--------- 586 Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 VLG FN P F++ I L+ +A+I+EIVR G+ AVP GQMEA+ +L Sbjct: 587 ------VLG-FNI-------PVFIAGIITLTLNASAYISEIVRGGIKAVPVGQMEASRSL 632 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363 GL++ + + ++LPQA+R +IP +Q++ LK++++ A+G +L+ G I+ +T Q+ Sbjct: 633 GLSYNRTMQKIILPQAIRIMIPSFINQFVISLKDTTILSAIGLIELLQTGKIIVARTLQS 692 Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392 + + IYL L + L K+ Sbjct: 693 TMVYFVIALIYLILITSLTKLAKNLEKKV 721 >gi|17548701|ref|NP_522041.1| amino acid ABC transporter transmembrane protein [Ralstonia solanacearum GMI1000] gi|17430949|emb|CAD17631.1| probable amino acid transmembrane abc transporter protein [Ralstonia solanacearum GMI1000] Length = 262 Score = 93.2 bits (230), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 48/134 (35%), Positives = 85/134 (63%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 +F S +AL+ A+ AE +R+GL+AVP+GQ+EAA +LGL+ V+ PQA + + Sbjct: 128 DFTSACVALAFNAGAYNAESIRAGLLAVPKGQLEAAHSLGLSRWHTFADVIFPQAFKVAL 187 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 PPL + +++LLK+SSLA A+G +L +VG + T Q + ++ IYL+L+ ++ F Sbjct: 188 PPLVNNFISLLKDSSLAYAIGVVELTNVGNRLQAATFQPLPALVTTAVIYLALTTVLTQF 247 Query: 385 MNRLNAKIALKEKK 398 N + ++ ++ ++ Sbjct: 248 SNAVEQRMDVEGRR 261 >gi|323527326|ref|YP_004229479.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia sp. CCGE1001] gi|323384328|gb|ADX56419.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. CCGE1001] Length = 246 Score = 93.2 bits (230), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 49/129 (37%), Positives = 77/129 (59%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + I L +TAA + E VRSG+ A+PRGQ A +A+G T + R VLLP A R I+P Sbjct: 111 FSASIICLGLFTAARVCEQVRSGINALPRGQRAAGLAMGFTQWQTYRYVLLPVAYRIIVP 170 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PLTS++LN+ KNS++A +G DL + +++ T Q E + Y+ +++++ M Sbjct: 171 PLTSEFLNIFKNSAVASTIGLLDLSAQARQLVDYTSQTYESFIAVTLAYVLINLVVMQLM 230 Query: 386 NRLNAKIAL 394 + A+ L Sbjct: 231 RWVEARTRL 239 Score = 43.5 bits (101), Expect = 0.052, Method: Compositional matrix adjust. Identities = 27/78 (34%), Positives = 41/78 (52%) Query: 81 SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140 ++Y +L GF T ++ S + A I+G+ G R NK + I VYV +FRNIP Sbjct: 18 EPTTYLGWLLSGFWVTITVSLSAWVIALIVGSFFGVLRTVPNKWASGIGTVYVAIFRNIP 77 Query: 141 PLVVIFFLYKSVLSVLPI 158 +V F Y + +LP+ Sbjct: 78 LIVQFFTWYLVIPELLPV 95 >gi|167587240|ref|ZP_02379628.1| ABC polar amino acid transporter, inner membrane subunit [Burkholderia ubonensis Bu] Length = 240 Score = 93.2 bits (230), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 48/96 (50%), Positives = 66/96 (68%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 EF++ ++ LS YTAAF+AE +GL VP Q +AA ALGLT +A R V+LPQA+R + Sbjct: 106 EFVAGWVGLSAYTAAFVAEECEAGLRGVPLAQRDAAAALGLTPLQALRYVILPQAVRIAL 165 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 PPL Q +NL+KNSSLA+A+G A+L + +T Sbjct: 166 PPLFGQTMNLVKNSSLAMAIGVAELSYASRQVETET 201 >gi|254253238|ref|ZP_04946556.1| ABC-type amino acid transport system permease component [Burkholderia dolosa AUO158] gi|124895847|gb|EAY69727.1| ABC-type amino acid transport system permease component [Burkholderia dolosa AUO158] Length = 246 Score = 93.2 bits (230), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 47/129 (36%), Positives = 77/129 (59%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + + L +T A + E VRSG+ A+P+GQ A +A+G T + R VLLP A R I+P Sbjct: 111 FTASIVCLGLFTGARVCEQVRSGINALPKGQRAAGLAMGFTQWQTYRYVLLPVAYRIIVP 170 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PLTS++LN+ KNS++A +G DL + +++ T Q E + Y+ +++++ FM Sbjct: 171 PLTSEFLNIFKNSAVASTIGLLDLSAQARQLVDYTAQTYESFIAVTLAYVLINLVVMAFM 230 Query: 386 NRLNAKIAL 394 + A+ L Sbjct: 231 RWIEARTRL 239 Score = 42.7 bits (99), Expect = 0.088, Method: Compositional matrix adjust. Identities = 27/77 (35%), Positives = 41/77 (53%) Query: 81 SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140 ++Y ++ GF T ++ + A I+G+L G R NK +A I VYV +FRN+P Sbjct: 18 EPTTYFGWLMSGFWVTIEVSLVAWVIALIVGSLFGVLRTVPNKWLAAIGTVYVSIFRNVP 77 Query: 141 PLVVIFFLYKSVLSVLP 157 +V F Y V +LP Sbjct: 78 LIVQFFIWYLVVPELLP 94 >gi|331266847|ref|YP_004326477.1| ABC transporter membrane-spanning permease,polar amino acid transport system; glutamine transport,putative [Streptococcus oralis Uo5] gi|326683519|emb|CBZ01137.1| ABC transporter membrane-spanning permease,polar amino acid transport system; glutamine transport,putative [Streptococcus oralis Uo5] Length = 225 Score = 93.2 bits (230), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 75/239 (31%), Positives = 115/239 (48%), Gaps = 45/239 (18%) Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFAT----------RLSRHFHEKTG 216 FG F N G F TL + + F+ + VLGI+ + +T R+ F++ T Sbjct: 14 FGQFFN--GFLF-TLALAIGS--FILAMVLGIIFGVLSTSKHQILRILARIFVEFYQNT- 67 Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVS-PEFMSLYIALSC 275 PLL + +GLP I T+ P + + + + Sbjct: 68 ---PLLVQFVIVFYGLP----------------------LISEHTIMIPIYWTAVLCVGL 102 Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335 Y A+IAE++RSG+ ++P GQMEAA++ G T+ A RL++LPQA R I+PPLT+Q +NL+ Sbjct: 103 YHGAYIAEVIRSGIQSIPSGQMEAALSQGFTYISAMRLIILPQAFRIILPPLTNQIVNLI 162 Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF---MNRLNAK 391 KN+S + DL+ V + G I L +Y +L +A F M + N K Sbjct: 163 KNTSTVAIISGVDLMFVTKSWSALNGNYIPAFLGAALLYFALCFPVAQFGRKMEQANKK 221 Score = 36.2 bits (82), Expect = 8.8, Method: Compositional matrix adjust. Identities = 23/76 (30%), Positives = 42/76 (55%), Gaps = 5/76 (6%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151 GF+ T LA I A ++G + G S ++++ + R++VE ++N P LV ++ Sbjct: 20 GFLFTLALAIGSFILAMVLGIIFGVLSTSKHQILRILARIFVEFYQNTPLLVQFVIVFYG 79 Query: 152 VLSVLP-IPDHSIVLP 166 LP I +H+I++P Sbjct: 80 ----LPLISEHTIMIP 91 >gi|167904261|ref|ZP_02491466.1| hypothetical protein BpseN_18566 [Burkholderia pseudomallei NCTC 13177] Length = 246 Score = 93.2 bits (230), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 46/126 (36%), Positives = 76/126 (60%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + + L +T A + E VRSG+ A+P+GQ A +A+G T + R VLLP A R I+P Sbjct: 111 FTASIVCLGLFTGARVCEQVRSGINALPKGQRAAGLAMGFTQWQTYRYVLLPVAYRIIVP 170 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PLTS++LN+ KNS++A +G DL + +++ T Q E + Y+ +++++ FM Sbjct: 171 PLTSEFLNIFKNSAVASTIGLLDLSAQARQLVDYTAQTYESFIAVTLAYVVINLIVMTFM 230 Query: 386 NRLNAK 391 + +K Sbjct: 231 RWVESK 236 Score = 43.5 bits (101), Expect = 0.058, Method: Compositional matrix adjust. Identities = 26/78 (33%), Positives = 43/78 (55%) Query: 81 SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140 ++Y ++ GF T ++ + + A ++G+L G R NK ++ I VYV +FRNIP Sbjct: 18 EPTTYLGWLMSGFWVTVKVSLAAWVIALVVGSLFGVLRTVPNKWLSAIGTVYVSIFRNIP 77 Query: 141 PLVVIFFLYKSVLSVLPI 158 +V F Y V +LP+ Sbjct: 78 LIVQFFVWYLVVPELLPV 95 >gi|238797860|ref|ZP_04641352.1| Binding-protein-dependent transport system inner membrane component [Yersinia mollaretii ATCC 43969] gi|238718276|gb|EEQ10100.1| Binding-protein-dependent transport system inner membrane component [Yersinia mollaretii ATCC 43969] Length = 245 Score = 93.2 bits (230), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 46/96 (47%), Positives = 68/96 (70%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 EF++ +I L+ Y+ AFIAE +RSG+ V +GQ AA ALGLT ++ R V+LPQA++ + Sbjct: 113 EFLAGFIGLTLYSTAFIAEELRSGISGVAKGQKYAAQALGLTGWQSMRHVVLPQALKIAM 172 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 PPL QY+N++KNSSLA+A+G A+L + +T Sbjct: 173 PPLLGQYMNIIKNSSLAMAIGVAELSYASRQVETET 208 Score = 49.7 bits (117), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 23/66 (34%), Positives = 38/66 (57%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151 GF+ T W++ ++ +T++G L+ A R S N+ + W Y +FRN P L+ +FF Y + Sbjct: 22 GFLLTLWISACTVVASTLLGFLLAAARDSENRALQWFAMGYSTLFRNTPLLIQLFFWYFA 81 Query: 152 VLSVLP 157 LP Sbjct: 82 ASQFLP 87 >gi|306825705|ref|ZP_07459044.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sp. oral taxon 071 str. 73H25AP] gi|304432066|gb|EFM35043.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sp. oral taxon 071 str. 73H25AP] Length = 225 Score = 93.2 bits (230), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 74/238 (31%), Positives = 116/238 (48%), Gaps = 43/238 (18%) Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFAT----------RLSRHFHEKTG 216 FG F N G F TL + + F+ + VLGI+ + +T R+ F++ T Sbjct: 14 FGQFFN--GFLF-TLALAIGS--FILAMVLGIIFGVLSTSKHQILRILARIFVEFYQNT- 67 Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 PLL + +GLP + D ++ P + + + + Y Sbjct: 68 ---PLLVQFVIVFYGLPLIS----------DHTIM-----------IPIYWTAVLCVGLY 103 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 A+IAE++RSG+ ++P GQMEAA++ G T+ A RL++LPQA R I+PPLT+Q +NL+K Sbjct: 104 HGAYIAEVIRSGIQSIPSGQMEAALSQGFTYISAMRLIILPQAFRIILPPLTNQIVNLIK 163 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF---MNRLNAK 391 N+S + DL+ V + G I L +Y +L +A F M + N K Sbjct: 164 NTSTVAIISGVDLMFVTKSWSALYGNYIPAFLGAALLYFALCFPVAQFGRKMEQANKK 221 Score = 38.1 bits (87), Expect = 2.5, Method: Compositional matrix adjust. Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 5/76 (6%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151 GF+ T LA I A ++G + G S ++++ + R++VE ++N P LV ++ Sbjct: 20 GFLFTLALAIGSFILAMVLGIIFGVLSTSKHQILRILARIFVEFYQNTPLLVQFVIVFYG 79 Query: 152 VLSVLP-IPDHSIVLP 166 LP I DH+I++P Sbjct: 80 ----LPLISDHTIMIP 91 >gi|291527965|emb|CBK93551.1| amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Eubacterium rectale M104/1] Length = 504 Score = 93.2 bits (230), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 66/212 (31%), Positives = 121/212 (57%), Gaps = 27/212 (12%) Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL------YISTFLIFGLPTLVLIALKY 242 I +F+ +LGIVL F + R H++ G L +L Y++ +I G P ++ + + Y Sbjct: 307 ITIFAVMLGIVLG-FLIAIVRTSHDRNG-GLAILNGICKAYLT--IIRGTPVMIQLLIIY 362 Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302 ++ ++V+ + + IA +AA++AEIVRSG+++V GQ EA + Sbjct: 363 -------------YVVLASVTNKILVAVIAFGLNSAAYVAEIVRSGIMSVDIGQFEAGRS 409 Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362 LGL +R+ +LV++PQA+++I+P L +++++LLK +S++ +G DL G I + T + Sbjct: 410 LGLNYRQTMKLVIIPQAVKNILPALLNEFISLLKETSISGYIGMMDLTKGGDIIRSNTYE 469 Query: 363 A----IEIILIWMFIYLSLSIMIALFMNRLNA 390 A I + LI++ I + LS ++ RL + Sbjct: 470 AFIPLIAVALIYLVIVMLLSHGVSKLERRLRS 501 >gi|254509082|ref|ZP_05121185.1| ABC-type glutamine transport system, permease component [Vibrio parahaemolyticus 16] gi|219548015|gb|EED25037.1| ABC-type glutamine transport system, permease component [Vibrio parahaemolyticus 16] Length = 246 Score = 93.2 bits (230), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 56/178 (31%), Positives = 99/178 (55%), Gaps = 23/178 (12%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 +++P+L + ++ +G+PTL+ ++L + F + IAL+ Sbjct: 89 RSIPVLVLLLWVYYGMPTLLDVSLDH-----------------------FWAGVIALTVA 125 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 +AF+AE+ R G+ A+ RGQ EAA +LGL++ + RLV+LPQA R I+PPL +Q++ +LK Sbjct: 126 ESAFMAEVFRGGIQAISRGQHEAAESLGLSYWQKMRLVILPQAFRQILPPLGNQFVYILK 185 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394 SSL +G +DL ++ +EI + YL L ++++ + L +IA+ Sbjct: 186 MSSLVSVIGLSDLTRRANELVVNEYLPLEIYTFLVLEYLVLILLVSQAVRWLEKRIAI 243 Score = 41.2 bits (95), Expect = 0.31, Method: Compositional matrix adjust. Identities = 25/74 (33%), Positives = 45/74 (60%), Gaps = 1/74 (1%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 ++ GF +T ++ M+ A IG LV LS + ++ I R+YVE+ R+IP LV++ ++ Sbjct: 41 LIAGFNDTIQVSLLSMLFAMTIGLLVALPALSNSPILKGINRLYVEIIRSIPVLVLLLWV 100 Query: 149 YKSVLSVLPIP-DH 161 Y + ++L + DH Sbjct: 101 YYGMPTLLDVSLDH 114 >gi|295394800|ref|ZP_06805015.1| glutamine ABC superfamily ATP binding cassette transporter, permease protein [Brevibacterium mcbrellneri ATCC 49030] gi|294972396|gb|EFG48256.1| glutamine ABC superfamily ATP binding cassette transporter, permease protein [Brevibacterium mcbrellneri ATCC 49030] Length = 276 Score = 93.2 bits (230), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 68/205 (33%), Positives = 110/205 (53%), Gaps = 21/205 (10%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 V + +LG+V +L RLS K ++P + F GLP L+LI Y L Sbjct: 81 VLALILGVVFALL--RLS----SKKWISVPATLVLEFF-RGLPVLLLIFATYLLF----- 128 Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 G T+ F + I L+ Y IAE+VR+G++AVPRGQ EAA ++GL+ + Sbjct: 129 --------GKTIG-SFWPVVIGLTLYNGMVIAEVVRAGILAVPRGQREAAQSIGLSDSQT 179 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370 LVL+PQA R+++P L +Q + LLK+S+L V + DL+ I Q G + ++ Sbjct: 180 MSLVLMPQAFRAMMPTLIAQIVVLLKDSALGYMVTYQDLLHQVNIIGRQYGNLLPTFIVG 239 Query: 371 MFIYLSLSIMIALFMNRLNAKIALK 395 IY+++++++A L +++ K Sbjct: 240 AVIYIAINLIVAGIARWLESRMQRK 264 >gi|167738656|ref|ZP_02411430.1| binding-protein-dependent transport system inner membrane component [Burkholderia pseudomallei 14] Length = 158 Score = 93.2 bits (230), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 47/96 (48%), Positives = 67/96 (69%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 EF++ ++ LS YT+AF+AE ++GL VP GQ AA ALGL+ +A R V+LPQA+R + Sbjct: 24 EFVAGWLGLSGYTSAFVAEEFQAGLRGVPAGQHHAASALGLSPLQAFRFVVLPQAVRIAL 83 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 PPL QY+NL+KNSSL +A+G A+L + +T Sbjct: 84 PPLFGQYMNLIKNSSLTMAIGVAELSYASRQVETET 119 >gi|329116355|ref|ZP_08245072.1| ABC transporter, permease protein [Streptococcus parauberis NCFD 2020] gi|326906760|gb|EGE53674.1| ABC transporter, permease protein [Streptococcus parauberis NCFD 2020] Length = 229 Score = 93.2 bits (230), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 63/214 (29%), Positives = 118/214 (55%), Gaps = 22/214 (10%) Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF---GLPTLVLIALKYQ-LHFD 247 F +LGI+++ K LPL ++++F ++ G P +V I + + +HF+ Sbjct: 30 FGTILGIIITFL----------KRSSILPLKWLASFYVWIFRGTPMVVQIMIAFAWMHFN 79 Query: 248 KPVLGQFNFIGGSTVSPEFMSLY---IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304 Q I ++ +F L I +S + A+I+EIVR+G+ AVP GQ+EAA +LG Sbjct: 80 -----QMPIIDFGVLNLDFSRLLPGIIIISLNSGAYISEIVRAGIEAVPAGQLEAAYSLG 134 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364 + + A R V+LPQA ++I+P L ++++ ++K+S+L +G +L + +++ T Q I Sbjct: 135 IRPKNAMRFVILPQAFKNILPALGNEFITIIKDSALLQTIGVMELWNGAQSVVTSTYQPI 194 Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 +L F YL ++ +++ ++ L K+ K Sbjct: 195 TPLLFGAFYYLMVTTVMSQLLHLLEKKMGQGVKS 228 >gi|296132710|ref|YP_003639957.1| polar amino acid ABC transporter, inner membrane subunit [Thermincola sp. JR] gi|296031288|gb|ADG82056.1| polar amino acid ABC transporter, inner membrane subunit [Thermincola potens JR] Length = 225 Score = 93.2 bits (230), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 68/219 (31%), Positives = 118/219 (53%), Gaps = 20/219 (9%) Query: 183 MDTNAKIFVFSFVLGIVLSLFAT--RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240 + T ++ V S +G VL L + RLS+ K L +Y+ F G P LV I + Sbjct: 23 VKTTIQLTVISVSIGTVLGLIFSILRLSKF---KILSFLSAVYVDFFR--GTPLLVQILM 77 Query: 241 KYQLHFD-KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299 HF P +G+F P +S +ALS + A+IAEI R+G+ ++ RGQMEA Sbjct: 78 ---FHFAIMPAIGRF---------PSIVSGLVALSLNSGAYIAEIFRAGIQSIDRGQMEA 125 Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359 A +LG+T+ +A R +++PQA + ++P L ++++ +LK+SSL + +L G I + Sbjct: 126 ARSLGMTYGQAMRYIIVPQAFKRVLPALGNEFIAMLKDSSLVSVIAVQELAMTGSLISGR 185 Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 T + E + +YL L+++++ F+ L + + + Sbjct: 186 TARPFEAWIPVAILYLILTMVLSRFVAYLERRFGKSDTR 224 >gi|291524539|emb|CBK90126.1| amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Eubacterium rectale DSM 17629] Length = 504 Score = 93.2 bits (230), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 64/211 (30%), Positives = 119/211 (56%), Gaps = 25/211 (11%) Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTG-----KALPLLYISTFLIFGLPTLVLIALKYQ 243 I +F+ +LGIVL F + R H++ G + Y++ +I G P ++ + + Y Sbjct: 307 ITIFAVMLGIVLG-FLIAIVRTSHDRNGGLAILNGICKAYLT--IIRGTPVMIQLLIIY- 362 Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 ++ ++V+ + + IA +AA++AEIVRSG+++V GQ EA +L Sbjct: 363 ------------YVVLASVTNKILVAVIAFGLNSAAYVAEIVRSGIMSVDIGQFEAGRSL 410 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363 GL +R+ +LV++PQA+++I+P L +++++LLK +S++ +G DL G I + T +A Sbjct: 411 GLNYRQTMKLVIIPQAVKNILPALLNEFISLLKETSISGYIGMMDLTKGGDIIRSNTYEA 470 Query: 364 ----IEIILIWMFIYLSLSIMIALFMNRLNA 390 I + LI++ I + LS ++ RL + Sbjct: 471 FIPLIAVALIYLVIVMLLSHGVSKLERRLRS 501 >gi|237739680|ref|ZP_04570161.1| amino acid transport system permease [Fusobacterium sp. 2_1_31] gi|262066638|ref|ZP_06026250.1| amino acid ABC transporter, permease/substrate-binding protein [Fusobacterium periodonticum ATCC 33693] gi|294783187|ref|ZP_06748511.1| amino acid ABC transporter, permease/substrate-binding protein [Fusobacterium sp. 1_1_41FAA] gi|229423288|gb|EEO38335.1| amino acid transport system permease [Fusobacterium sp. 2_1_31] gi|291379661|gb|EFE87179.1| amino acid ABC transporter, permease/substrate-binding protein [Fusobacterium periodonticum ATCC 33693] gi|294480065|gb|EFG27842.1| amino acid ABC transporter, permease/substrate-binding protein [Fusobacterium sp. 1_1_41FAA] Length = 236 Score = 93.2 bits (230), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 48/147 (32%), Positives = 89/147 (60%) Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309 +L F+G +P + IA + A++AEI+R+G+ + +GQMEA ALGL++ + Sbjct: 90 ILANLIFVGALRETPILVIGGIAFGLNSGAYVAEIIRAGIEGLDKGQMEAGRALGLSYSQ 149 Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369 R +++PQA+++I+P L S+++ LLK +S+ +G DL+ I +QT + +E +L Sbjct: 150 TMRKIIVPQAIKNILPALVSEFITLLKETSIIGFIGGIDLLRSASIITSQTYRGVEPLLA 209 Query: 370 WMFIYLSLSIMIALFMNRLNAKIALKE 396 FIYL L+ + +FM ++ + + + Sbjct: 210 VGFIYLILTSIFTVFMRKVERGLKVSD 236 >gi|24112047|ref|NP_706557.1| glutamate/aspartate transport system permease [Shigella flexneri 2a str. 301] gi|30062158|ref|NP_836329.1| glutamate/aspartate transport system permease [Shigella flexneri 2a str. 2457T] gi|110804697|ref|YP_688217.1| glutamate/aspartate transport system permease [Shigella flexneri 5 str. 8401] gi|24050871|gb|AAN42264.1| glutamate/aspartate transport system permease [Shigella flexneri 2a str. 301] gi|30040403|gb|AAP16135.1| glutamate/aspartate transport system permease [Shigella flexneri 2a str. 2457T] gi|110614245|gb|ABF02912.1| glutamate/aspartate transport system permease [Shigella flexneri 5 str. 8401] gi|281600011|gb|ADA72995.1| Glutamate/aspartate transport system permease [Shigella flexneri 2002017] gi|313649700|gb|EFS14124.1| amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Shigella flexneri 2a str. 2457T] Length = 246 Score = 92.8 bits (229), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 48/129 (37%), Positives = 78/129 (60%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+S + L +TAA + E VR+ + ++PRGQ AA+A+GLT + R VLLP A R I+P Sbjct: 111 FLSSMLCLGLFTAARVCEQVRAAIQSLPRGQKNAALAMGLTLPQTYRYVLLPNAYRVIVP 170 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 P+TS+ +NL+KNS++A +G D+ + G +++ + A E Y+ ++ I L M Sbjct: 171 PMTSEMMNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAWESFTAITLAYVLINAFIMLVM 230 Query: 386 NRLNAKIAL 394 + K+ L Sbjct: 231 TLVERKVRL 239 Score = 39.7 bits (91), Expect = 0.75, Method: Compositional matrix adjust. Identities = 23/77 (29%), Positives = 41/77 (53%) Query: 81 SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140 +++Y + GF T L+ I A ++G+ G R N+ ++ + +YVE+FRN+P Sbjct: 17 GNTTYLGWVWSGFQVTIALSICAWIIAFLVGSFFGILRTVPNRFLSGLGTLYVELFRNVP 76 Query: 141 PLVVIFFLYKSVLSVLP 157 +V F Y + +LP Sbjct: 77 LIVQFFTWYLVIPELLP 93 >gi|116628198|ref|YP_820817.1| ABC-type amino acid transport system, periplasmic and permease components [Streptococcus thermophilus LMD-9] gi|116101475|gb|ABJ66621.1| ABC-type amino acid transport system, periplasmic and permease components [Streptococcus thermophilus LMD-9] Length = 736 Score = 92.8 bits (229), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 59/209 (28%), Positives = 105/209 (50%), Gaps = 23/209 (11%) Query: 190 FVFSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243 F + ++GI+ + A R+ + +PL+ ++ F+ +G+P L+ Sbjct: 544 FAIAMIIGIIFGMMAVAPNKTLRVISQIFVDVVRGIPLMIVAAFIYWGIPNLIE------ 597 Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 N G + +F++ IALS A+IAEIVR G+ AVP GQMEA+ +L Sbjct: 598 -----------NITGHQSPINDFVAATIALSLNGGAYIAEIVRGGIEAVPIGQMEASRSL 646 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363 G+ + R ++LPQA+R ++P +Q++ LK++++ A+G +L G II + Q+ Sbjct: 647 GVPYNTTMRKIILPQAVRLMLPNFINQFVISLKDTTIVSAIGLVELFQTGKIIIARNYQS 706 Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392 + I IYL + + RL ++ Sbjct: 707 FRMYAILAIIYLVIITCLTKLAKRLEKRL 735 >gi|326692921|ref|ZP_08229926.1| ABC-type amino acid transport system, permease component [Leuconostoc argentinum KCTC 3773] Length = 214 Score = 92.8 bits (229), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 53/127 (41%), Positives = 80/127 (62%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+S +AL YT+AFIAE VR+G++AV GQME A A GL+ +A R ++LPQA R +P Sbjct: 84 FVSGTVALMLYTSAFIAETVRAGILAVNGGQMEGARANGLSFAQAMRHIVLPQAFRVALP 143 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 L +Q++NL+KNSS+ VG DL+ G I T + +I +YL +++ ++ +M Sbjct: 144 SLGNQFINLVKNSSILAFVGGLDLMYQGNMIAANTFETFGTYIIVGILYLIITLPLSYYM 203 Query: 386 NRLNAKI 392 L K+ Sbjct: 204 QHLERKL 210 Score = 36.6 bits (83), Expect = 6.4, Method: Compositional matrix adjust. Identities = 20/61 (32%), Positives = 34/61 (55%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 ++ GF T + ++ + I+GT+ ++ V I +YV+VFRNIP LV+ FF Sbjct: 12 LMQGFGYTLLSSVIALVGSLILGTVFAVMQVMPQAWVRRIGNIYVQVFRNIPLLVITFFF 71 Query: 149 Y 149 + Sbjct: 72 F 72 >gi|295675493|ref|YP_003604017.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. CCGE1002] gi|295435336|gb|ADG14506.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. CCGE1002] Length = 214 Score = 92.8 bits (229), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 46/126 (36%), Positives = 79/126 (62%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + I LS Y A+IAEI RSG+ AVP+GQ E + LGLT +A V+LPQ + ++P Sbjct: 86 FAAGVIGLSVYQGAYIAEIFRSGIEAVPKGQWEVSQILGLTRAQAFSFVVLPQTGKIVLP 145 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PL QYL+L+K++S+ +G ++L+ G I+++ G+ +EI + IY ++ ++ ++ Sbjct: 146 PLVGQYLSLIKDTSIVSMIGMSELMHGGQAIVDRIGKPVEIYGLVALIYFAVCFPLSQWV 205 Query: 386 NRLNAK 391 + + Sbjct: 206 RHHDRR 211 >gi|121592679|ref|YP_984575.1| polar amino acid ABC transporter inner membrane subunit [Acidovorax sp. JS42] gi|222109459|ref|YP_002551723.1| polar amino acid ABC transporter inner membrane subunit [Acidovorax ebreus TPSY] gi|120604759|gb|ABM40499.1| amino acid ABC transporter membrane protein, PAAT family [Acidovorax sp. JS42] gi|221728903|gb|ACM31723.1| polar amino acid ABC transporter, inner membrane subunit [Acidovorax ebreus TPSY] Length = 260 Score = 92.8 bits (229), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 64/171 (37%), Positives = 96/171 (56%), Gaps = 12/171 (7%) Query: 214 KTGKALPLLYISTFLIF---GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY 270 +T + L ++++F I+ G P LV I Y F PVL + G + P+F + Sbjct: 81 RTSRLAWLRWVASFYIWAIRGTPLLVQILFVY---FALPVL-----VPGLNL-PDFAAAV 131 Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +AL A+ AE +R+GL+AVPRGQ EAA ALGL+ V+ PQA + +PPL S Sbjct: 132 VALGLNVGAYNAEAIRAGLLAVPRGQTEAARALGLSRTHVFFDVVFPQAFKIALPPLVSN 191 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 ++ LLK+SSLA A+G +L +VG I + T Q + + YL L+ ++ Sbjct: 192 FVALLKDSSLAYAIGVVELTNVGNRIQSATFQPVATLTTVAITYLILTTLV 242 >gi|149190471|ref|ZP_01868742.1| putative amino acid ABC transporter, permease protein [Vibrio shilonii AK1] gi|148835725|gb|EDL52691.1| putative amino acid ABC transporter, permease protein [Vibrio shilonii AK1] Length = 247 Score = 92.8 bits (229), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 60/178 (33%), Positives = 98/178 (55%), Gaps = 23/178 (12%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 +++P+L + ++ +G+PTL+ I+L HF V IAL+ Sbjct: 90 RSIPVLVLLLWVYYGMPTLLDISLN---HFWAGV--------------------IALTIA 126 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 +AF+AE+ R G+ AV RGQ EAA +LGL + + RLV+LPQA R I+PPL +Q++ +LK Sbjct: 127 ESAFMAEVFRGGIQAVTRGQHEAAESLGLNYWQKMRLVILPQAFRQILPPLGNQFVYILK 186 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394 SSL +G +DL ++ +EI + YL L ++++ + L +IA+ Sbjct: 187 MSSLVSVIGLSDLTRRANELVVNEYLPLEIYTFLVLEYLVLILLVSQAVRWLEKRIAI 244 Score = 43.9 bits (102), Expect = 0.041, Method: Compositional matrix adjust. Identities = 27/70 (38%), Positives = 43/70 (61%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L GF +T +++ M+ A +IG LV LS + I RVYVEV R+IP LV++ ++ Sbjct: 42 LLAGFKDTIYVSLLSMMFAMLIGLLVAFPALSDKPWLRAINRVYVEVIRSIPVLVLLLWV 101 Query: 149 YKSVLSVLPI 158 Y + ++L I Sbjct: 102 YYGMPTLLDI 111 >gi|194434439|ref|ZP_03066700.1| glutamate/aspartate ABC transporter, permease protein GltK [Shigella dysenteriae 1012] gi|194417290|gb|EDX33398.1| glutamate/aspartate ABC transporter, permease protein GltK [Shigella dysenteriae 1012] gi|332096803|gb|EGJ01793.1| amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Shigella dysenteriae 155-74] Length = 224 Score = 92.8 bits (229), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 45/129 (34%), Positives = 81/129 (62%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 +S +A S + AA+ +EI+R+G+ ++ RGQ AA+ALG+TH ++ +L++LPQA R+++ Sbjct: 96 RLISAMVAFSMFEAAYYSEIIRAGIKSISRGQSSAALALGMTHWQSMKLIILPQAFRAMV 155 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 P L +Q + L +++SL + AD TI + G +E+IL F+Y +S+ +L Sbjct: 156 PLLLTQGIVLFQDTSLVYVLSLADFFRTASTIDERDGTQVEMILFAGFVYFVISLSASLL 215 Query: 385 MNRLNAKIA 393 ++ L + A Sbjct: 216 VSYLKRRTA 224 Score = 41.2 bits (95), Expect = 0.27, Method: Compositional matrix adjust. Identities = 29/92 (31%), Positives = 49/92 (53%), Gaps = 10/92 (10%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G V T + + ++ + GT++ RLS+ VAW + YV VFR+IP ++V+ + Sbjct: 16 LLDGLVITLKITVTAVVIGILWGTMLAVMRLSSFAPVAWFAKAYVNVFRSIPLVMVLLWF 75 Query: 149 Y-------KSVLSVLPIPD---HSIVLPFGMF 170 Y ++VL + P D S ++ F MF Sbjct: 76 YLIVPGFLQNVLGLSPKNDIRLISAMVAFSMF 107 >gi|257869222|ref|ZP_05648875.1| amino acid ABC transporter [Enterococcus gallinarum EG2] gi|257803386|gb|EEV32208.1| amino acid ABC transporter [Enterococcus gallinarum EG2] Length = 718 Score = 92.8 bits (229), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 57/192 (29%), Positives = 102/192 (53%), Gaps = 29/192 (15%) Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPTLVLIALKYQ 243 F + ++GI+L LF+ R G + +P++ ++ F+ FGL + I + Sbjct: 532 FALALIIGIILGLFSVSPIRALRIFAGIYVDIIRGIPMMVLAFFIFFGLSDAIGITI--- 588 Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 P+F + I L+ +A+IAEIVR G+ AVP GQMEA+ +L Sbjct: 589 --------------------PDFAAGVITLTLNASAYIAEIVRGGIKAVPVGQMEASRSL 628 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363 GLT+ + + ++LPQA++ +IP +Q++ LK++++ +G +L+ G I+ +T Q+ Sbjct: 629 GLTYTRTMQKIILPQAIKIMIPSFVNQFVISLKDTTIISVIGVVELLQTGKIIVARTTQS 688 Query: 364 IEIILIWMFIYL 375 + LI +YL Sbjct: 689 TYVYLIVAVMYL 700 >gi|83720841|ref|YP_441773.1| hypothetical protein BTH_I1226 [Burkholderia thailandensis E264] gi|167580591|ref|ZP_02373465.1| hypothetical protein BthaT_20718 [Burkholderia thailandensis TXDOH] gi|167618698|ref|ZP_02387329.1| hypothetical protein BthaB_20482 [Burkholderia thailandensis Bt4] gi|257137941|ref|ZP_05586203.1| hypothetical protein BthaA_01784 [Burkholderia thailandensis E264] gi|83654666|gb|ABC38729.1| hypothetical protein BTH_I1226 [Burkholderia thailandensis E264] Length = 246 Score = 92.8 bits (229), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 46/126 (36%), Positives = 76/126 (60%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + + L +T A + E VRSG+ A+P+GQ A +A+G T + R VLLP A R I+P Sbjct: 111 FTASIVCLGLFTGARVCEQVRSGINALPKGQRAAGLAMGFTQWQTYRYVLLPVAYRIIVP 170 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PLTS++LN+ KNS++A +G DL + +++ T Q E + Y+ +++++ FM Sbjct: 171 PLTSEFLNIFKNSAVASTIGLLDLSAQARQLVDYTAQTYESFIAVTLAYVVINLIVMAFM 230 Query: 386 NRLNAK 391 + +K Sbjct: 231 RWVESK 236 Score = 43.5 bits (101), Expect = 0.061, Method: Compositional matrix adjust. Identities = 26/78 (33%), Positives = 43/78 (55%) Query: 81 SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140 ++Y ++ GF T ++ + + A ++G+L G R NK ++ I VYV +FRNIP Sbjct: 18 EPTTYLGWLMSGFWVTVKVSLAAWVIALVVGSLFGVLRTVPNKWLSAIGTVYVSIFRNIP 77 Query: 141 PLVVIFFLYKSVLSVLPI 158 +V F Y V +LP+ Sbjct: 78 LIVQFFVWYLVVPELLPV 95 >gi|26991699|ref|NP_747124.1| polar amino acid ABC transporter inner membrane subunit [Pseudomonas putida KT2440] gi|24986800|gb|AAN70588.1|AE016701_8 amino acid ABC transporter, permease protein [Pseudomonas putida KT2440] Length = 320 Score = 92.8 bits (229), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 69/208 (33%), Positives = 114/208 (54%), Gaps = 15/208 (7%) Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248 I V S LG+V+ LFA L R + T + L +Y+ L+ G P LV I + Y F Sbjct: 128 ISVVSGALGLVIGLFAG-LCRLSNNPTLRDLSTVYVE--LVRGTPLLVQIFIFY--FFIG 182 Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308 VL +S EF + AL+ +T A++AEIVR+G+ ++ +GQ EAA +LGL Sbjct: 183 TVL---------NLSREFAGV-AALALFTGAYVAEIVRAGVQSIAKGQNEAARSLGLNAG 232 Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368 ++ R V+LPQA + ++PPL Q+++L+K++SL + +L G I + EI Sbjct: 233 QSMRHVILPQAFKRVLPPLAGQFISLVKDTSLVSVIAITELTKSGREAITTSFSTFEIWF 292 Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKE 396 +YL +++ ++ +RL ++A + Sbjct: 293 CVAGLYLLINLPLSHIASRLERRLAQSD 320 >gi|313500999|gb|ADR62365.1| Polar amino acid ABC transporter, inner membrane subunit [Pseudomonas putida BIRD-1] Length = 320 Score = 92.8 bits (229), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 69/208 (33%), Positives = 114/208 (54%), Gaps = 15/208 (7%) Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248 I V S LG+V+ LFA L R + T + L +Y+ L+ G P LV I + Y F Sbjct: 128 ISVVSGALGLVIGLFAG-LCRLSNNPTLRDLSTVYVE--LVRGTPLLVQIFIFY--FFIG 182 Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308 VL +S EF + AL+ +T A++AEIVR+G+ ++ +GQ EAA +LGL Sbjct: 183 TVL---------NLSREFAGV-AALALFTGAYVAEIVRAGVQSIAKGQNEAARSLGLNAG 232 Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368 ++ R V+LPQA + ++PPL Q+++L+K++SL + +L G I + EI Sbjct: 233 QSMRHVILPQAFKRVLPPLAGQFISLVKDTSLVSVIAITELTKSGREAITTSFSTFEIWF 292 Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKE 396 +YL +++ ++ +RL ++A + Sbjct: 293 CVAGLYLLINLPLSHIASRLERRLAQSD 320 >gi|108803349|ref|YP_643286.1| amino acid ABC transporter permease [Rubrobacter xylanophilus DSM 9941] gi|108764592|gb|ABG03474.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Rubrobacter xylanophilus DSM 9941] Length = 242 Score = 92.8 bits (229), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 80/243 (32%), Positives = 126/243 (51%), Gaps = 40/243 (16%) Query: 165 LPFGMFLNN-----RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKAL 219 L FG+ L N +GL+ TL++ A+ V+GIVL LF L Sbjct: 25 LDFGVVLENPAPLLKGLAV-TLSLAALAE------VVGIVLGLF---------------L 62 Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGST--VSPEFMSLY----IAL 273 LL IS + LP V I + P+L Q I +T V F SL+ AL Sbjct: 63 ALLKISRSRLLSLPAQVYI----DVFRGTPLLVQITIIYFTTAAVGIRFTSLFFAGLTAL 118 Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333 S +AA++AEI R+G+ ++ +GQMEA A GL++ + R +++PQA R +IPPLT++++ Sbjct: 119 SLNSAAYVAEIFRAGIQSIDKGQMEAGRASGLSYAQTMRYIIVPQAFRRVIPPLTNEFVT 178 Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII---LIWMFIYLSLSIMIALFMNRLNA 390 L+K++SL +G A+L+ + + T +I LI++ + L L + + RLN Sbjct: 179 LIKDTSLVSVIGLAELLRAARVLQSATFNGTPLIAAALIYLAVCLPLIYLTNILERRLNR 238 Query: 391 KIA 393 + A Sbjct: 239 RTA 241 >gi|307730961|ref|YP_003908185.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia sp. CCGE1003] gi|307585496|gb|ADN58894.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. CCGE1003] Length = 246 Score = 92.8 bits (229), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 49/129 (37%), Positives = 76/129 (58%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + I L +T A + E VRSG+ A+PRGQ A +A+G T + R VLLP A R I+P Sbjct: 111 FSASIICLGLFTGARVCEQVRSGINALPRGQRAAGLAMGFTQWQTYRYVLLPVAYRIIVP 170 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PLTS++LN+ KNS++A +G DL + +++ T Q E + Y+ +++++ M Sbjct: 171 PLTSEFLNIFKNSAVASTIGLLDLSAQARQLVDYTSQTYESFIAVTLAYVLINLVVMQLM 230 Query: 386 NRLNAKIAL 394 + AK L Sbjct: 231 RWVEAKTRL 239 Score = 43.1 bits (100), Expect = 0.077, Method: Compositional matrix adjust. Identities = 26/78 (33%), Positives = 41/78 (52%) Query: 81 SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140 ++Y +L GF T ++ S + A I+G+ G R NK + + VYV +FRNIP Sbjct: 18 EPTTYLGWLLSGFWVTITVSLSAWVIALIVGSFFGVLRTVPNKWASGVGTVYVAIFRNIP 77 Query: 141 PLVVIFFLYKSVLSVLPI 158 +V F Y + +LP+ Sbjct: 78 LIVQFFTWYLVIPELLPV 95 >gi|315924300|ref|ZP_07920523.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Pseudoramibacter alactolyticus ATCC 23263] gi|315622371|gb|EFV02329.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Pseudoramibacter alactolyticus ATCC 23263] Length = 215 Score = 92.8 bits (229), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 62/224 (27%), Positives = 116/224 (51%), Gaps = 24/224 (10%) Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240 LT++ VF +LGIV++L R H K A+ Y+ F G P L+ + + Sbjct: 10 LTIEVAIVAVVFGAILGIVVAL-----GRISHNKVANAVTWFYVWFFR--GTPLLLQLFI 62 Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300 Y F P++ N G + V ++ S + A++AEI+R+ + ++P GQMEAA Sbjct: 63 VY---FAVPII-YLNATGSTFVIDPMFCAFVTFSLNSTAYMAEIIRAAIESIPEGQMEAA 118 Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 ALG+++ +A R +++PQ + ++ PL ++ + LLK++SL + D++ T+ + T Sbjct: 119 KALGMSYHQAMRKIIIPQTFKRLVAPLGNELIMLLKDTSLVSTIALFDVLRTVKTMASST 178 Query: 361 GQAIEIILIWMF------IYLSLSIMIALFMNRLNAKIALKEKK 398 G W++ IYL L+ ++ + ++L + E++ Sbjct: 179 GN-------WIYYLYAAAIYLFLTTILQVIFDKLETRFGAYERR 215 Score = 36.2 bits (82), Expect = 9.5, Method: Compositional matrix adjust. Identities = 23/65 (35%), Positives = 35/65 (53%) Query: 88 AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147 AI G V T +A ++ I+G +V GR+S NK+ + YV FR P L+ +F Sbjct: 3 AIFSGTVLTIEVAIVAVVFGAILGIVVALGRISHNKVANAVTWFYVWFFRGTPLLLQLFI 62 Query: 148 LYKSV 152 +Y +V Sbjct: 63 VYFAV 67 >gi|300692511|ref|YP_003753506.1| glutamate/aspartate transport protein; ABC superfamily, membrane component [Ralstonia solanacearum PSI07] gi|299079571|emb|CBJ52249.1| glutamate/aspartate transport protein; ABC superfamily, membrane component [Ralstonia solanacearum PSI07] Length = 242 Score = 92.8 bits (229), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 46/129 (35%), Positives = 78/129 (60%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+ + L +TAA + E VRSG+ ++PRGQ A +A+G T + R V+LP A R I+P Sbjct: 107 FLCAMLCLGTFTAARVCEQVRSGINSLPRGQRNAGLAMGFTLAQTYRHVMLPMAFRIIVP 166 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PLTS++LN+ KNS++A +G +L + G +++ T Q E + +Y+ +++ + M Sbjct: 167 PLTSEFLNIFKNSAVASTIGLLELAAQGRQLVDYTAQPYESFIAVTLMYMLINLTVMTIM 226 Query: 386 NRLNAKIAL 394 + A+ L Sbjct: 227 RWVEARTRL 235 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 28/81 (34%), Positives = 45/81 (55%) Query: 81 SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140 + +Y +L G T L S I A I+G+++G R NKL++ + YVE+FRNIP Sbjct: 16 QNQTYLDWLLSGLKTTIALGLSSWIIALILGSVLGVLRTVPNKLLSGLATAYVELFRNIP 75 Query: 141 PLVVIFFLYKSVLSVLPIPDH 161 +V +F Y + ++P D+ Sbjct: 76 LIVQLFIWYFVMPELVPGGDY 96 >gi|167036062|ref|YP_001671293.1| polar amino acid ABC transporter inner membrane subunit [Pseudomonas putida GB-1] gi|166862550|gb|ABZ00958.1| polar amino acid ABC transporter, inner membrane subunit [Pseudomonas putida GB-1] Length = 320 Score = 92.8 bits (229), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 69/209 (33%), Positives = 114/209 (54%), Gaps = 17/209 (8%) Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248 I V S LG+V+ LFA L R + T + L +Y+ L+ G P LV I + Y Sbjct: 128 ISVVSGALGLVIGLFAG-LCRLSNNPTLRDLSTVYVE--LVRGTPLLVQIFIFY------ 178 Query: 249 PVLGQFNFIGGS-TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307 FIG +S EF + AL+ +T A++AEIVR+G+ ++ +GQ EAA +LGL Sbjct: 179 ------FFIGTVLNLSREFAGV-AALALFTGAYVAEIVRAGVQSIAKGQNEAARSLGLNA 231 Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367 ++ R V+LPQA + ++PPL Q+++L+K++SL + +L G I + EI Sbjct: 232 GQSMRHVILPQAFKRVLPPLAGQFISLVKDTSLVSVIAITELTKSGREAITTSFSTFEIW 291 Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIALKE 396 +YL +++ ++ +RL ++A + Sbjct: 292 FCVAGLYLLINLPLSHIASRLERRLAQSD 320 >gi|209517529|ref|ZP_03266369.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. H160] gi|209502062|gb|EEA02078.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. H160] Length = 246 Score = 92.8 bits (229), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 48/129 (37%), Positives = 76/129 (58%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + + L +TAA + E VRSG+ A+PRGQ A +A+G T + R VLLP A R I+P Sbjct: 111 FSASIVCLGLFTAARVCEQVRSGINALPRGQRAAGLAVGFTQWQTYRYVLLPVAYRIIVP 170 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PLTS++LN+ KNS++A +G DL + +++ T Q E + Y+ +++++ M Sbjct: 171 PLTSEFLNIFKNSAVASTIGLLDLSAQARQLVDYTSQTYESFIAVTVAYMLINVIVMFLM 230 Query: 386 NRLNAKIAL 394 + K L Sbjct: 231 RWVEVKTRL 239 Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust. Identities = 26/78 (33%), Positives = 41/78 (52%) Query: 81 SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140 ++Y +L G T ++ S + A I+G+L G R NK + + VYV +FRNIP Sbjct: 18 EPTTYLGWLLSGLWVTVTVSLSAWVIALIVGSLFGVLRTVPNKWASGVGTVYVAIFRNIP 77 Query: 141 PLVVIFFLYKSVLSVLPI 158 +V F Y + +LP+ Sbjct: 78 LIVQFFIWYLVIPELLPV 95 >gi|224418024|ref|ZP_03656030.1| amino acid ABC transporter permease [Helicobacter canadensis MIT 98-5491] gi|253827356|ref|ZP_04870241.1| ABC-type transport system, permease component [Helicobacter canadensis MIT 98-5491] gi|313141563|ref|ZP_07803756.1| amino acid transport system permease protein [Helicobacter canadensis MIT 98-5491] gi|253510762|gb|EES89421.1| ABC-type transport system, permease component [Helicobacter canadensis MIT 98-5491] gi|313130594|gb|EFR48211.1| amino acid transport system permease protein [Helicobacter canadensis MIT 98-5491] Length = 225 Score = 92.8 bits (229), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 51/141 (36%), Positives = 87/141 (61%), Gaps = 2/141 (1%) Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315 F+G P + IA + A++AEI+R+G+ + +GQMEAA ALG+ + + + ++ Sbjct: 85 FVGALRDMPILLIAAIAFGINSGAYVAEIIRAGIAGLDKGQMEAARALGMGYALSMKEII 144 Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375 +PQA++ I+PPL S+++ LLK +S+ +G DL+ I +QT +AIE +L IYL Sbjct: 145 IPQAIKRILPPLVSEFIALLKETSIVGFIGGVDLLRAANIITSQTYRAIEPLLAVGIIYL 204 Query: 376 SLSIMIALFMNRLNAKIALKE 396 L+ + A+ M ++ + LKE Sbjct: 205 ILTSIFAMLMRKVEKR--LKE 223 >gi|28900676|ref|NP_800331.1| amino acid ABC transporter permease [Vibrio parahaemolyticus RIMD 2210633] gi|260365550|ref|ZP_05778087.1| amino acid ABC transporter, permease protein [Vibrio parahaemolyticus K5030] gi|260877614|ref|ZP_05889969.1| amino acid ABC transporter, permease protein [Vibrio parahaemolyticus AN-5034] gi|260895965|ref|ZP_05904461.1| amino acid ABC transporter, permease protein [Vibrio parahaemolyticus Peru-466] gi|260901646|ref|ZP_05910041.1| amino acid ABC transporter, permease protein [Vibrio parahaemolyticus AQ4037] gi|28809056|dbj|BAC62164.1| amino acid ABC transporter, permease protein [Vibrio parahaemolyticus RIMD 2210633] gi|308085227|gb|EFO34922.1| amino acid ABC transporter, permease protein [Vibrio parahaemolyticus Peru-466] gi|308090547|gb|EFO40242.1| amino acid ABC transporter, permease protein [Vibrio parahaemolyticus AN-5034] gi|308108934|gb|EFO46474.1| amino acid ABC transporter, permease protein [Vibrio parahaemolyticus AQ4037] gi|308114332|gb|EFO51872.1| amino acid ABC transporter, permease protein [Vibrio parahaemolyticus K5030] Length = 265 Score = 92.8 bits (229), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 73/241 (30%), Positives = 121/241 (50%), Gaps = 19/241 (7%) Query: 158 IPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGK 217 +PD+ G + + +T++ +A F+ VLG+V +L RLS K G Sbjct: 43 VPDYIAFYEDGEWWPAELIDGLLVTLNISAISLFFTLVLGLVTALL--RLS---DSKVGN 97 Query: 218 ALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT 277 + Y+ +I P LV I L Y + PV+G F + +ALS + Sbjct: 98 VIGTTYVE--VIRNTPLLVQIYLLYFVF--GPVIGL----------DRFSTAVLALSLFQ 143 Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 A+ AEI R+GL ++P+GQ EAA LGL+ + V+LPQ ++ +PPLT++ ++L+KN Sbjct: 144 GAYTAEIFRAGLNSIPKGQFEAAQTLGLSPFYTYKDVILPQVLQRTLPPLTNEVVSLIKN 203 Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 SS+ + DL + I+++T EI IYL+L++ ++ L K+ + Sbjct: 204 SSIVSVMAIFDLTTQARNIVSETAMPFEIWFTVAAIYLALTLSLSGLSAWLEHKLGASWR 263 Query: 398 K 398 K Sbjct: 264 K 264 >gi|15807268|ref|NP_295998.1| amino acid ABC transporter permease [Deinococcus radiodurans R1] gi|6460085|gb|AAF11824.1|AE002060_3 amino acid ABC transporter, permease protein [Deinococcus radiodurans R1] Length = 239 Score = 92.8 bits (229), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 65/183 (35%), Positives = 103/183 (56%), Gaps = 15/183 (8%) Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279 P+ I ++ G+P +VL+++ Y F P LG G F + +AL Y+AA Sbjct: 66 PIGNIYVEVVRGIPLIVLLSVIY---FGLPTLG-LTLAG-------FPAAVLALGLYSAA 114 Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339 + +EIVR GL +VP GQ+EAA +LGL+ +A R V+LPQA R +P L +++++L+ SS Sbjct: 115 YTSEIVRGGLGSVPAGQIEAARSLGLSRGQALRFVVLPQAWRVALPALGNEFVSLILGSS 174 Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY----LSLSIMIALFMNRLNAKIALK 395 LA AV +L S G I N T + E+ + IY +L+ + +RL+ +L Sbjct: 175 LASAVTLQELFSQGRYITNATYRQFEVYAVLAVIYFVLTFTLTRAVRALEHRLSRGQSLP 234 Query: 396 EKK 398 E++ Sbjct: 235 ERR 237 >gi|254229165|ref|ZP_04922584.1| ABC transporter, permease protein, putative [Vibrio sp. Ex25] gi|262395515|ref|YP_003287368.1| amino acid ABC transporter permease protein [Vibrio sp. Ex25] gi|151938250|gb|EDN57089.1| ABC transporter, permease protein, putative [Vibrio sp. Ex25] gi|262339109|gb|ACY52903.1| amino acid ABC transporter permease protein [Vibrio sp. Ex25] Length = 265 Score = 92.8 bits (229), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 73/241 (30%), Positives = 122/241 (50%), Gaps = 19/241 (7%) Query: 158 IPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGK 217 +PD+ G + + +T++ +A F+ VLG+V +L RLS K G Sbjct: 43 VPDYIAFYEDGEWWPAELIDGLLVTLNISAISLFFTLVLGLVTALL--RLS---DSKVGN 97 Query: 218 ALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT 277 + Y+ +I P LV I L Y + PV+G F + +ALS + Sbjct: 98 VIGATYVE--VIRNTPLLVQIYLLYFVF--GPVIGL----------DRFSTAVLALSLFQ 143 Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 A+ AEI+R+GL ++P+GQ EAA LGL+ + V+LPQ ++ +PPLT++ ++L+KN Sbjct: 144 GAYTAEILRAGLNSIPKGQFEAAQTLGLSPFYTYKDVILPQVLQRTLPPLTNEVVSLIKN 203 Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 SS+ + DL + I+++T EI IYL+L++ ++ L K+ + Sbjct: 204 SSIVSVMAIFDLTTQARNIVSETAMPFEIWFTVAAIYLALTLSLSGLSAWLEHKLGASWR 263 Query: 398 K 398 K Sbjct: 264 K 264 >gi|148550099|ref|YP_001270201.1| polar amino acid ABC transporter inner membrane subunit [Pseudomonas putida F1] gi|148514157|gb|ABQ81017.1| polar amino acid ABC transporter, inner membrane subunit [Pseudomonas putida F1] Length = 320 Score = 92.8 bits (229), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 69/208 (33%), Positives = 114/208 (54%), Gaps = 15/208 (7%) Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248 I V S LG+V+ LFA L R + T + L +Y+ L+ G P LV I + Y F Sbjct: 128 ISVVSGALGLVIGLFAG-LCRLSNNPTLRDLSTVYVE--LVRGTPLLVQIFIFY--FFIG 182 Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308 VL +S EF + AL+ +T A++AEIVR+G+ ++ +GQ EAA +LGL Sbjct: 183 TVL---------NLSREFAGV-AALALFTGAYVAEIVRAGVQSIAKGQNEAARSLGLNAG 232 Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368 ++ R V+LPQA + ++PPL Q+++L+K++SL + +L G I + EI Sbjct: 233 QSMRHVILPQAFKRVLPPLAGQFISLVKDTSLVSVIAITELTKSGREAITTSFSTFEIWF 292 Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKE 396 +YL +++ ++ +RL ++A + Sbjct: 293 CVAGLYLLINLPLSHIASRLERRLAQSD 320 >gi|293408779|ref|ZP_06652618.1| glutamate Aspartate transport system permease gltK [Escherichia coli B354] gi|291471957|gb|EFF14440.1| glutamate Aspartate transport system permease gltK [Escherichia coli B354] Length = 224 Score = 92.8 bits (229), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 46/129 (35%), Positives = 81/129 (62%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 +S +A S + AA+ +EI+R+G+ ++ RGQ AA+ALG+TH ++ +L++LPQA R+++ Sbjct: 96 RLISAMVAFSMFEAAYYSEIIRAGIQSISRGQSSAALALGMTHWQSMKLIILPQAFRAMV 155 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 P L +Q + L +++SL + AD TI + G +E+IL FIY +S+ +L Sbjct: 156 PLLLTQGIVLFQDTSLVYVLSLADFFRTASTIGERDGTQVEMILFAGFIYFVISLSASLL 215 Query: 385 MNRLNAKIA 393 ++ L + A Sbjct: 216 VSYLKRRTA 224 Score = 41.2 bits (95), Expect = 0.32, Method: Compositional matrix adjust. Identities = 21/61 (34%), Positives = 36/61 (59%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G V T + + ++ + GT++ RLS+ VAW + YV VFR+IP ++V+ + Sbjct: 16 LLDGLVITLKITVTAVVIGILWGTMLAVMRLSSFAPVAWFAKAYVNVFRSIPLVMVLLWF 75 Query: 149 Y 149 Y Sbjct: 76 Y 76 >gi|167837859|ref|ZP_02464742.1| hypothetical protein Bpse38_15327 [Burkholderia thailandensis MSMB43] Length = 246 Score = 92.8 bits (229), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 46/126 (36%), Positives = 76/126 (60%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + + L +T A + E VRSG+ A+P+GQ A +A+G T + R VLLP A R I+P Sbjct: 111 FTASIVCLGLFTGARVCEQVRSGINALPKGQRAAGLAMGFTQWQTYRYVLLPVAYRIIVP 170 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PLTS++LN+ KNS++A +G DL + +++ T Q E + Y+ +++++ FM Sbjct: 171 PLTSEFLNIFKNSAVASTIGLLDLSAQARQLVDYTAQTYESFIAVTLAYVVINLIVMAFM 230 Query: 386 NRLNAK 391 + +K Sbjct: 231 RWVESK 236 Score = 42.0 bits (97), Expect = 0.17, Method: Compositional matrix adjust. Identities = 25/78 (32%), Positives = 43/78 (55%) Query: 81 SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140 ++Y ++ GF T ++ + + A ++G+L G R +K ++ I VYV +FRNIP Sbjct: 18 EPTTYLGWLMSGFWVTIKVSLAAWVIALVVGSLFGVLRTMPSKWLSAIGTVYVSIFRNIP 77 Query: 141 PLVVIFFLYKSVLSVLPI 158 +V F Y V +LP+ Sbjct: 78 LIVQFFIWYLVVPELLPV 95 >gi|167586130|ref|ZP_02378518.1| hypothetical protein BuboB_12374 [Burkholderia ubonensis Bu] Length = 246 Score = 92.8 bits (229), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 46/126 (36%), Positives = 75/126 (59%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + + L +T A + E VRSG+ A+P+GQ A +A+G T + R VLLP A R I+P Sbjct: 111 FTASIVCLGLFTGARVCEQVRSGINALPKGQRAAGLAMGFTQWQTYRYVLLPVAYRIIVP 170 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PLTS++LN+ KNS++A +G DL + +++ T Q E + Y+ +++++ FM Sbjct: 171 PLTSEFLNIFKNSAVASTIGLLDLSAQARQLVDYTAQTYESFIAVTLAYVVINLVVMAFM 230 Query: 386 NRLNAK 391 + K Sbjct: 231 RWVEGK 236 Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust. Identities = 26/77 (33%), Positives = 42/77 (54%) Query: 81 SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140 ++Y ++ GF T ++ + + A ++G+L G R NK ++ I VYV +FRNIP Sbjct: 18 EPTTYFGWLMSGFGVTIKVSLTAWVIALVVGSLFGVLRTVPNKWLSAIGTVYVSIFRNIP 77 Query: 141 PLVVIFFLYKSVLSVLP 157 +V F Y V +LP Sbjct: 78 LIVQFFIWYLVVPELLP 94 >gi|251781980|ref|YP_002996282.1| hypothetical protein SDEG_0566 [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|242390609|dbj|BAH81068.1| hypothetical protein SDEG_0566 [Streptococcus dysgalactiae subsp. equisimilis GGS_124] Length = 233 Score = 92.8 bits (229), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 55/157 (35%), Positives = 90/157 (57%), Gaps = 8/157 (5%) Query: 243 QLHFDKPVLGQ--FNFIGGSTVSPEFM--SLYIALSC----YTAAFIAEIVRSGLIAVPR 294 + + + P+L Q F + G + +S F+ S ++ C Y AA+IAE++RSG+ AVP+ Sbjct: 70 EFYQNTPLLVQVVFMYYGLAIISKGFIMPSAFLTTVCCVGLYHAAYIAEVIRSGIEAVPK 129 Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354 GQ EAA++ G T + L+++PQA+R+I+PPLT+Q +NL+KN+S+ + ADL+ Sbjct: 130 GQTEAALSQGFTRLQTMSLIIIPQAVRTILPPLTNQVVNLIKNTSIVAIISGADLMFTAK 189 Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 T + F+Y L IA+F R + Sbjct: 190 VWAYDTTYYVPAFAGAAFLYFILCFPIAIFGRRQEER 226 >gi|160896812|ref|YP_001562394.1| polar amino acid ABC transporter inner membrane protein [Delftia acidovorans SPH-1] gi|160362396|gb|ABX34009.1| polar amino acid ABC transporter, inner membrane subunit [Delftia acidovorans SPH-1] Length = 250 Score = 92.8 bits (229), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 57/134 (42%), Positives = 80/134 (59%), Gaps = 4/134 (2%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P F+ + +AL +T+A IAE VRSG+ A+PRGQ A +A+G T + R VLLP A R I Sbjct: 109 PGFVLVVLALGFFTSARIAEQVRSGIQALPRGQRYAGMAMGFTTFQYYRYVLLPMAFRII 168 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 IPPLTS+ +N+ KNSS+A AV A+L +T + IEI L L ++ A Sbjct: 169 IPPLTSETMNVFKNSSVAFAVSVAELTMFAMQAQEETSRGIEIYL----AVTGLYVVSAF 224 Query: 384 FMNRLNAKIALKEK 397 +NR+ A I + + Sbjct: 225 AINRIMAFIEKRSR 238 Score = 43.1 bits (100), Expect = 0.067, Method: Compositional matrix adjust. Identities = 35/112 (31%), Positives = 55/112 (49%), Gaps = 10/112 (8%) Query: 71 EIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICR 130 E+ Q D +Y +L + T ++ ++ A ++G+L+G R + WI R Sbjct: 16 EVGQSCFGKNGDITYLDWMLSAWGWTISVSLLSLVIALVVGSLIGTLRTLEGR--PWIVR 73 Query: 131 V---YVEVFRNIPPLVVIFFLYKSVLSVLP----IPDHS-IVLPFGMFLNNR 174 + +VE+FRNIP LV IF Y V S +P +P +VL G F + R Sbjct: 74 LGNAWVELFRNIPLLVHIFMWYHVVPSFVPALKSLPGFVLVVLALGFFTSAR 125 >gi|187927461|ref|YP_001897948.1| polar amino acid ABC transporter inner membrane subunit [Ralstonia pickettii 12J] gi|309779837|ref|ZP_07674592.1| glutamate/aspartate transport system permease protein GltJ [Ralstonia sp. 5_7_47FAA] gi|187724351|gb|ACD25516.1| polar amino acid ABC transporter, inner membrane subunit [Ralstonia pickettii 12J] gi|308921414|gb|EFP67056.1| glutamate/aspartate transport system permease protein GltJ [Ralstonia sp. 5_7_47FAA] Length = 242 Score = 92.8 bits (229), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 46/117 (39%), Positives = 77/117 (65%), Gaps = 2/117 (1%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+S + L +TAA + E VRSG+ ++PRGQ A +A+G T + R V+LP + R I+P Sbjct: 107 FLSAMLCLGTFTAARVCEQVRSGINSLPRGQRNAGLAMGFTLAQTYRYVMLPMSFRIIVP 166 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE--IILIWMFIYLSLSIM 380 PLTS++LN+ KNS++A +G +L + G +++ T Q E I + M++ ++L++M Sbjct: 167 PLTSEFLNIFKNSAVASTIGLLELAAQGRQLVDYTAQPYESFIAVTLMYMLINLTVM 223 Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust. Identities = 28/81 (34%), Positives = 44/81 (54%) Query: 81 SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140 + +Y +L G T L S I A +IG+++G R NK ++ + YVEVFRNIP Sbjct: 16 QNQTYLDWLLAGLKTTVVLGLSSWIIALVIGSVLGVLRTVPNKWLSGLAAAYVEVFRNIP 75 Query: 141 PLVVIFFLYKSVLSVLPIPDH 161 +V +F Y + ++P D+ Sbjct: 76 LIVQLFIWYFVMPELVPGGDY 96 >gi|225868950|ref|YP_002744898.1| amino acid ABC transporter permease protein [Streptococcus equi subsp. zooepidemicus] gi|225702226|emb|CAW99967.1| putative amino acid ABC transporter permease protein [Streptococcus equi subsp. zooepidemicus] Length = 227 Score = 92.8 bits (229), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 69/222 (31%), Positives = 123/222 (55%), Gaps = 18/222 (8%) Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240 +TM +A + F ++G++++L + H K L LY+ F G P +V I + Sbjct: 19 VTMMISACVVFFGTIIGLLVTLI-----KRSHIKPLSWLVSLYVWIFR--GTPMVVQIMI 71 Query: 241 KYQ-LHF-DKPVLGQFNFIGGSTVSPEFMSLY---IALSCYTAAFIAEIVRSGLIAVPRG 295 + LHF D P+ +G + +F L I +S + A+I+EIVR+G+ AVP+G Sbjct: 72 AFAWLHFNDLPI------VGFGVLDLDFSRLLPGIIIISLNSGAYISEIVRAGIEAVPKG 125 Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355 Q+EAA +LG+ + A R V+LPQA+R+I+P L ++ + ++K+S+L +G +L + + Sbjct: 126 QLEAAYSLGIRPKHAMRYVVLPQALRTILPALGNELITIIKDSALLQTIGVMELWNGAQS 185 Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 ++ T I +L F YL ++ +++ + L K+A K Sbjct: 186 VVAATYLPITPLLFAAFYYLMVTTLLSYLLGALERKLAQGGK 227 >gi|270263715|ref|ZP_06191984.1| transporter [Serratia odorifera 4Rx13] gi|270042599|gb|EFA15694.1| transporter [Serratia odorifera 4Rx13] Length = 224 Score = 92.8 bits (229), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 45/127 (35%), Positives = 80/127 (62%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 +S +A S + AA+ +EI+R+G+I++ RGQ AA+ALG+TH ++ +LV+LPQA R+++ Sbjct: 96 RLISAMVAFSLFEAAYYSEIIRAGIISISRGQSSAALALGMTHWQSMKLVILPQAFRAMV 155 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 P L +Q + L +++SL + AD TI + G +E+IL F+Y +S+ + Sbjct: 156 PLLLTQGIVLFQDTSLVYVLSLADFFRTASTIGERDGTQVEMILFAGFVYFVISLAASAL 215 Query: 385 MNRLNAK 391 ++ L + Sbjct: 216 VSYLKKR 222 Score = 38.1 bits (87), Expect = 2.2, Method: Compositional matrix adjust. Identities = 21/68 (30%), Positives = 40/68 (58%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G V T + + ++ + GT++ RLS K ++W +YV +FR++P ++V+ + Sbjct: 16 LLQGLVITLKITVTAIVFGILWGTILAVMRLSPIKPISWFATLYVNLFRSVPLVMVLLWF 75 Query: 149 YKSVLSVL 156 Y V S+L Sbjct: 76 YLVVPSLL 83 >gi|297565167|ref|YP_003684139.1| polar amino acid ABC transporter inner membrane subunit [Meiothermus silvanus DSM 9946] gi|296849616|gb|ADH62631.1| polar amino acid ABC transporter, inner membrane subunit [Meiothermus silvanus DSM 9946] Length = 216 Score = 92.8 bits (229), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 68/204 (33%), Positives = 110/204 (53%), Gaps = 13/204 (6%) Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247 +I S + G+ L L+R + L L YI L+ G P LV I L + F Sbjct: 22 RITALSLIFGVFLGTLVA-LARMSPIRWLSGLTLGYIE--LLRGTPLLVQIFL---IFFG 75 Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307 P L Q EF++ IA S ++A++AEI+R+G+ ++P+GQ EAA++LG + Sbjct: 76 IPQLTQQQI-------NEFVAGVIAFSINSSAYVAEILRAGIQSIPKGQREAALSLGFSP 128 Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367 + R ++LPQA +IPPL ++ + LLKNSSL A+ +L G I +T + E+ Sbjct: 129 TQTLRYIILPQAFIRVIPPLVNEGIALLKNSSLLSAIAVVELTRAGQLISARTFKPFEMY 188 Query: 368 LIWMFIYLSLSIMIALFMNRLNAK 391 L IYL ++++++ +L A+ Sbjct: 189 LAVSLIYLVMTVILSFVARQLEAR 212 >gi|317047305|ref|YP_004114953.1| polar amino acid ABC transporter inner membrane subunit [Pantoea sp. At-9b] gi|316948922|gb|ADU68397.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea sp. At-9b] Length = 225 Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 46/127 (36%), Positives = 80/127 (62%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 +S +A S + AA+ +EI+R+G+I++ RGQ AA+ALG+TH ++ +LV+LPQA R+++ Sbjct: 96 RLISAMVAFSLFEAAYYSEIIRAGIISIARGQSSAALALGMTHWQSMQLVILPQAFRAMV 155 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 P L +Q + L +++SL + AD TI + G +E+IL +Y +S+ +L Sbjct: 156 PLLLTQGIVLFQDTSLVYVLSLADFFRTASTIGERDGTQVEMILFAGLVYFVISLSASLL 215 Query: 385 MNRLNAK 391 ++ L K Sbjct: 216 VSYLKRK 222 Score = 40.0 bits (92), Expect = 0.73, Method: Compositional matrix adjust. Identities = 23/68 (33%), Positives = 39/68 (57%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G V T + + ++ I GTL+ RLSA + W ++YV +FR++P ++V+ + Sbjct: 16 LLNGMVITLKITLTAVVFGIIWGTLLAVMRLSAFAPIRWFAKLYVNLFRSVPLVMVLLWF 75 Query: 149 YKSVLSVL 156 Y V S L Sbjct: 76 YLVVPSFL 83 >gi|153834291|ref|ZP_01986958.1| ABC-type glutamine transport system, permease component [Vibrio harveyi HY01] gi|148869299|gb|EDL68313.1| ABC-type glutamine transport system, permease component [Vibrio harveyi HY01] Length = 246 Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 56/178 (31%), Positives = 98/178 (55%), Gaps = 23/178 (12%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 +++P+L + ++ +G+PTL+ ++L + F + IAL+ Sbjct: 89 RSIPVLVLLLWVYYGMPTLLDVSLNH-----------------------FWAGVIALTIA 125 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 +AF+AE+ R G+ A+ RGQ EAA +LGL + + RLV+LPQA R I+PPL +Q++ +LK Sbjct: 126 ESAFMAEVFRGGIQAISRGQHEAAESLGLNYWQKMRLVILPQAFRQILPPLGNQFVYILK 185 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394 SSL +G +DL ++ +EI + YL L ++++ + L +IA+ Sbjct: 186 MSSLVSVIGLSDLTRRANELVVNEYLPLEIYTFLVLEYLVLILLVSQAVRWLEKRIAI 243 Score = 45.4 bits (106), Expect = 0.017, Method: Compositional matrix adjust. Identities = 25/70 (35%), Positives = 43/70 (61%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 ++ GF +T ++ M+ A IG +V LS + + WI RVYVEV R+IP LV++ ++ Sbjct: 41 LVAGFNDTIQVSLLSMLFAMTIGLIVALPALSDSPALKWINRVYVEVIRSIPVLVLLLWV 100 Query: 149 YKSVLSVLPI 158 Y + ++L + Sbjct: 101 YYGMPTLLDV 110 >gi|317122273|ref|YP_004102276.1| polar amino acid ABC transporter inner membrane subunit [Thermaerobacter marianensis DSM 12885] gi|315592253|gb|ADU51549.1| polar amino acid ABC transporter, inner membrane subunit [Thermaerobacter marianensis DSM 12885] Length = 370 Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 71/210 (33%), Positives = 110/210 (52%), Gaps = 20/210 (9%) Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251 SF LG+ L+L R +AL + YI L+ G P +V+ L F L Sbjct: 177 LSFPLGVALAL-----GRVSSLPVVRALSIAYIE--LVRGTPLMVV------LFFSMTAL 223 Query: 252 GQFNFIGGSTVSPEFMSLYIA-LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 F V P+ ++ A L +TAA++AE VR GL VPRGQ+EAA ALGLT +A Sbjct: 224 PLFL---PPAVRPDLVTRAAAGLVLFTAAYVAEAVRGGLQGVPRGQIEAAQALGLTGTQA 280 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT---GQAIEII 367 LV+LPQA+R++IP L Q+++L K++SL G + V V ++++ G+ +E+ Sbjct: 281 VFLVVLPQALRAVIPALVGQFISLFKDTSLVAVWGLLEFVGVAQSVLSNPAYLGRHVEVY 340 Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 +Y ++L RL ++ + E+ Sbjct: 341 AFVAAVYWVFCYGMSLASRRLERRLGVGER 370 >gi|254178708|ref|ZP_04885363.1| binding-protein-dependent transport system inner membrane component [Burkholderia mallei ATCC 10399] gi|254358532|ref|ZP_04974805.1| binding-protein-dependent transport system inner membrane component [Burkholderia mallei 2002721280] gi|148027659|gb|EDK85680.1| binding-protein-dependent transport system inner membrane component [Burkholderia mallei 2002721280] gi|160699747|gb|EDP89717.1| binding-protein-dependent transport system inner membrane component [Burkholderia mallei ATCC 10399] Length = 315 Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 47/96 (48%), Positives = 67/96 (69%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 EF++ ++ LS YT+AF+AE ++GL VP GQ AA ALGL+ +A R V+LPQA+R + Sbjct: 181 EFVAGWLGLSGYTSAFVAEEFQAGLRGVPAGQHHAASALGLSPLQAFRFVVLPQAVRIAL 240 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 PPL QY+NL+KNSSL +A+G A+L + +T Sbjct: 241 PPLFGQYMNLIKNSSLTMAIGVAELSYASRQVETET 276 >gi|262041259|ref|ZP_06014470.1| glutamate/aspartate ABC superfamily ATP binding cassette transporter, permease protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|259041375|gb|EEW42435.1| glutamate/aspartate ABC superfamily ATP binding cassette transporter, permease protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 246 Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 48/129 (37%), Positives = 79/129 (61%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+S + L +TAA + E VR+ + ++PRGQ A +A+GLT + R VLLP A R I+P Sbjct: 111 FVSSMLCLGLFTAARVCEQVRAAIQSLPRGQKNAGLAMGLTLPQTYRYVLLPNAYRVIVP 170 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 P+TS+ +NL+KNS++A +G AD+ + G +++ + A E Y+ ++ +I L M Sbjct: 171 PMTSEMMNLVKNSAIASTIGLADMAAQAGKLLDYSAHAWESFTAITLAYVFINAVIMLIM 230 Query: 386 NRLNAKIAL 394 + K+ L Sbjct: 231 YVVERKVRL 239 Score = 43.9 bits (102), Expect = 0.049, Method: Compositional matrix adjust. Identities = 40/131 (30%), Positives = 60/131 (45%), Gaps = 19/131 (14%) Query: 81 SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140 +++Y + GF T L+ S I A ++G+L G R N+ ++ I YVE+FRN+P Sbjct: 17 GNTTYLGWLWGGFQITVALSISAWIIAFLVGSLFGILRTVPNRFLSGIGTCYVELFRNVP 76 Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200 +V F Y V LP N G+ F + +D N + FV S + L Sbjct: 77 LIVQFFTWYLVVPEFLP--------------ENIGMWFKS-ELDPNIQFFVSSM---LCL 118 Query: 201 SLF-ATRLSRH 210 LF A R+ Sbjct: 119 GLFTAARVCEQ 129 >gi|217421697|ref|ZP_03453201.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Burkholderia pseudomallei 576] gi|217395439|gb|EEC35457.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Burkholderia pseudomallei 576] Length = 315 Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 47/96 (48%), Positives = 67/96 (69%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 EF++ ++ LS YT+AF+AE ++GL VP GQ AA ALGL+ +A R V+LPQA+R + Sbjct: 181 EFVAGWLGLSGYTSAFVAEEFQAGLRGVPAGQHHAASALGLSPLQAFRFVVLPQAVRIAL 240 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 PPL QY+NL+KNSSL +A+G A+L + +T Sbjct: 241 PPLFGQYMNLIKNSSLTMAIGVAELSYASRQVETET 276 >gi|152969251|ref|YP_001334360.1| glutamate/aspartate ABC transporter membrane protein [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|206577704|ref|YP_002239697.1| glutamate/aspartate ABC transporter, permease protein GltJ [Klebsiella pneumoniae 342] gi|238893715|ref|YP_002918449.1| glutamate/aspartate transport system permease [Klebsiella pneumoniae NTUH-K2044] gi|288936539|ref|YP_003440598.1| polar amino acid ABC transporter inner membrane subunit [Klebsiella variicola At-22] gi|290510405|ref|ZP_06549775.1| glutamate/aspartate transport system permease [Klebsiella sp. 1_1_55] gi|330005984|ref|ZP_08305450.1| putative ATP synthase F0, A subunit [Klebsiella sp. MS 92-3] gi|150954100|gb|ABR76130.1| glutamate/aspartate transport protein (ABC superfamily, membrane) [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|206566762|gb|ACI08538.1| glutamate/aspartate ABC transporter, permease protein GltJ [Klebsiella pneumoniae 342] gi|238546031|dbj|BAH62382.1| glutamate/aspartate transport system permease [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] gi|288891248|gb|ADC59566.1| polar amino acid ABC transporter, inner membrane subunit [Klebsiella variicola At-22] gi|289777121|gb|EFD85119.1| glutamate/aspartate transport system permease [Klebsiella sp. 1_1_55] gi|328536021|gb|EGF62429.1| putative ATP synthase F0, A subunit [Klebsiella sp. MS 92-3] Length = 246 Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 48/129 (37%), Positives = 79/129 (61%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+S + L +TAA + E VR+ + ++PRGQ A +A+GLT + R VLLP A R I+P Sbjct: 111 FVSSMLCLGLFTAARVCEQVRAAIQSLPRGQKNAGLAMGLTLPQTYRYVLLPNAYRVIVP 170 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 P+TS+ +NL+KNS++A +G AD+ + G +++ + A E Y+ ++ +I L M Sbjct: 171 PMTSEMMNLVKNSAIASTIGLADMAAQAGKLLDYSAHAWESFTAITLAYVFINAVIMLIM 230 Query: 386 NRLNAKIAL 394 + K+ L Sbjct: 231 YVVERKVRL 239 Score = 44.3 bits (103), Expect = 0.037, Method: Compositional matrix adjust. Identities = 40/131 (30%), Positives = 60/131 (45%), Gaps = 19/131 (14%) Query: 81 SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140 +++Y + GF T L+ S I A ++G+L G R N+ ++ I YVE+FRN+P Sbjct: 17 GNTTYLGWLWSGFQITVALSISAWIIAFLVGSLFGILRTVPNRFLSGIGTCYVELFRNVP 76 Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200 +V F Y V LP N G+ F + +D N + FV S + L Sbjct: 77 LIVQFFTWYLVVPEFLP--------------ENIGMWFKS-ELDPNIQFFVSSM---LCL 118 Query: 201 SLF-ATRLSRH 210 LF A R+ Sbjct: 119 GLFTAARVCEQ 129 >gi|312797283|ref|YP_004030205.1| glutamate/aspartate transport system permease protein gltJ [Burkholderia rhizoxinica HKI 454] gi|312169058|emb|CBW76061.1| Glutamate/aspartate transport system permease protein gltJ [Burkholderia rhizoxinica HKI 454] Length = 246 Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 50/129 (38%), Positives = 78/129 (60%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + + L +TAA + E VRSG+ A+PRGQ A +ALG T + R V+LP A R I+P Sbjct: 111 FSASILCLGLFTAARVCEQVRSGIHALPRGQRAAGLALGFTLPQTYRHVMLPVAFRIIVP 170 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PLTS++LN+ KNS++A +G DL + +++ T QA E + Y+ +++++ FM Sbjct: 171 PLTSEFLNIFKNSAVASTIGLLDLSAQARQLVDYTAQAYESFIAVTIAYVLINLVVMGFM 230 Query: 386 NRLNAKIAL 394 + K L Sbjct: 231 RWVEKKTRL 239 Score = 43.9 bits (102), Expect = 0.041, Method: Compositional matrix adjust. Identities = 33/94 (35%), Positives = 50/94 (53%), Gaps = 6/94 (6%) Query: 69 GFEIDQGI----VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKL 124 G+ + GI V ++Y ++ G NT ++ + A +G L+G R NK Sbjct: 2 GYHWNWGIFMTPVSTGEPTTYLGWLISGLWNTVAVSLCAWVIALFVGALMGVLRTMPNKW 61 Query: 125 VAWICRVYVEVFRNIPPLVVIFFLYKSVL-SVLP 157 ++ I VYV VFRNI PL+V FF++ VL +LP Sbjct: 62 LSGIGTVYVAVFRNI-PLIVQFFIWYFVLPEILP 94 >gi|271499710|ref|YP_003332735.1| polar amino acid ABC transporter inner membrane subunit [Dickeya dadantii Ech586] gi|270343265|gb|ACZ76030.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya dadantii Ech586] Length = 224 Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 45/127 (35%), Positives = 80/127 (62%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 +S +A S + AA+ +EI+R+G+ ++ RGQ AA+ALG+TH ++ +LV+LPQA R+++ Sbjct: 96 RLVSAMVAFSLFEAAYYSEIIRAGIQSISRGQASAALALGMTHWQSMQLVILPQAFRAMV 155 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 P L +Q + L +++SL + AD TI + G +E+IL F+Y +S+ ++ Sbjct: 156 PLLLTQGIVLFQDTSLVYVLSLADFFRTASTIGERDGTQVEMILFAGFVYFVISLSASML 215 Query: 385 MNRLNAK 391 +N L + Sbjct: 216 VNYLKRR 222 Score = 37.7 bits (86), Expect = 3.4, Method: Compositional matrix adjust. Identities = 18/61 (29%), Positives = 37/61 (60%) Query: 96 TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSV 155 T + + ++ + GT++ RLS K ++W ++YV +FR++P ++V+ + Y V S+ Sbjct: 23 TLEITLTAVVVGIVWGTVLAVMRLSPVKPISWFAKLYVNLFRSVPLVMVLLWFYLIVPSL 82 Query: 156 L 156 L Sbjct: 83 L 83 >gi|251790535|ref|YP_003005256.1| polar amino acid ABC transporter inner membrane subunit [Dickeya zeae Ech1591] gi|247539156|gb|ACT07777.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya zeae Ech1591] Length = 224 Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 49/138 (35%), Positives = 85/138 (61%), Gaps = 1/138 (0%) Query: 255 NFIGGSTVSP-EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313 N +G S S +S +A S + AA+ +EI+R+G+ ++ RGQ AA+ALG+TH ++ +L Sbjct: 85 NVLGLSPKSDIRLVSAMVAFSLFEAAYYSEIIRAGIQSISRGQASAALALGMTHWQSMQL 144 Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI 373 V+LPQA R+++P L +Q + L +++SL + AD TI + G +E+IL F+ Sbjct: 145 VILPQAFRAMVPLLLTQGIVLFQDTSLVYVLSLADFFRTASTIGERDGTQVEMILFAGFV 204 Query: 374 YLSLSIMIALFMNRLNAK 391 Y +S+ ++ +N L + Sbjct: 205 YFVISLSASMLVNYLKRR 222 Score = 37.4 bits (85), Expect = 3.8, Method: Compositional matrix adjust. Identities = 18/61 (29%), Positives = 37/61 (60%) Query: 96 TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSV 155 T + + ++ + GT++ RLS K ++W ++YV +FR++P ++V+ + Y V S+ Sbjct: 23 TLEITLTAVVVGIVWGTVLAVMRLSPIKPISWFAKLYVNLFRSVPLVMVLLWFYLIVPSL 82 Query: 156 L 156 L Sbjct: 83 L 83 >gi|87121722|ref|ZP_01077609.1| putative amino-acid transport system permease abc transporter protein [Marinomonas sp. MED121] gi|86162973|gb|EAQ64251.1| putative amino-acid transport system permease abc transporter protein [Marinomonas sp. MED121] Length = 270 Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 64/218 (29%), Positives = 118/218 (54%), Gaps = 16/218 (7%) Query: 190 FVFSFVLGIVLSLFA---TRLSRH---FHEKTGKALPLLYISTFLIF-GLPTLVLIALKY 242 F+ + ++G++++L RL R F+ + + +P+L + ++ F G P LV Y Sbjct: 56 FLIACIIGLIMALAGFSRYRLIREVARFYVEVIRGVPVLVLLFYIAFVGAPELVDF---Y 112 Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLY---IALSCYTAAFIAEIVRSGLIAVPRGQMEA 299 KP+ Q+ + +F ++ +AL +AFIAE+ R+G+ V +GQ+EA Sbjct: 113 NWLMQKPIEWQWV---DKARTRDFNMVWRAILALCISYSAFIAEVFRAGIQEVDKGQIEA 169 Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359 A ALGL+ + R ++ PQA R I+PPL + ++ ++K+S+L A+G D+ +G + Sbjct: 170 AKALGLSGWQRFRFIIFPQAFRKILPPLGNDFVAMIKDSALVSALGVQDITQLGKVYSSS 229 Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 + Q E + F+YL L+I ++L + + K+K Sbjct: 230 SFQFFETYNVVAFVYLCLTITLSLLIRGFEQYLNRKQK 267 >gi|55821477|ref|YP_139919.1| glutamine ABC uptake transporter membrane-spanning protein [Streptococcus thermophilus LMG 18311] gi|55823406|ref|YP_141847.1| glutamine ABC transporter permease [Streptococcus thermophilus CNRZ1066] gi|55737462|gb|AAV61104.1| glutamine ABC uptake transporter membrane-spanning protein [Streptococcus thermophilus LMG 18311] gi|55739391|gb|AAV63032.1| glutamine ABC transporter permease protein [Streptococcus thermophilus CNRZ1066] gi|312278815|gb|ADQ63472.1| Glutamine ABC transporter permease protein [Streptococcus thermophilus ND03] Length = 736 Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 60/209 (28%), Positives = 104/209 (49%), Gaps = 23/209 (11%) Query: 190 FVFSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243 F + ++GI+ + A R+ + +PL+ ++ F+ +G+P L+ Sbjct: 544 FAIAMIIGIIFGMMAVAPNKTLRVISQIFVDVVRGIPLMIVAAFIYWGIPNLIE------ 597 Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 N G + F++ IALS A+IAEIVR G+ AVP GQMEA+ +L Sbjct: 598 -----------NITGHQSPINNFVAATIALSLNGGAYIAEIVRGGIEAVPIGQMEASRSL 646 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363 G+ + R V+LPQA+R ++P +Q++ LK++++ A+G +L G II + Q+ Sbjct: 647 GVPYNTTMRKVILPQAVRLMLPNFINQFVISLKDTTIVSAIGLVELFQTGKIIIARNYQS 706 Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392 + I IYL + + RL ++ Sbjct: 707 FRMYAILAIIYLVIITCLTKLAKRLEKRL 735 >gi|259503172|ref|ZP_05746074.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus antri DSM 16041] gi|259168829|gb|EEW53324.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus antri DSM 16041] Length = 502 Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 61/204 (29%), Positives = 106/204 (51%), Gaps = 22/204 (10%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 +F F+LG + +L S+ H + + YI I G P LV I Y Sbjct: 315 IFGFLLGTIFALMRLSQSKFLH-----GIAICYIE--FIRGTPMLVQIMFVY-------- 359 Query: 251 LGQFNFIGGSTVS--PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308 F G+ + P ++ IA+S + A++AE++RSG+ ++P GQ EAA +LG+T + Sbjct: 360 -----FGIGAIIQSMPALVAGIIAVSVNSGAYVAEVIRSGIQSLPVGQTEAARSLGMTKK 414 Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368 + R ++LPQA+R+I P L ++++ LLK+SSL +G +L+ + T + + + Sbjct: 415 QTFRFIVLPQALRNIWPALGNEFITLLKDSSLVSTIGVGELMYQTQLVQADTYKGVLPLF 474 Query: 369 IWMFIYLSLSIMIALFMNRLNAKI 392 I M IY L+ + +N ++ Sbjct: 475 ITMMIYFILTFTLTRILNYFEGRM 498 >gi|6706991|gb|AAF25532.1|AF104994_2 permease [Streptomyces coelicolor A3(2)] Length = 313 Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 74/223 (33%), Positives = 114/223 (51%), Gaps = 20/223 (8%) Query: 158 IPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIV--LSLFATRLSRHFHEKT 215 IPD+ F ++R L+ M I V + ++G+V + L RLS++ Sbjct: 61 IPDY--------FFDDRVLT----GMGKTLLITVLAMLIGVVGGILLAVMRLSKN---PV 105 Query: 216 GKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSC 275 ++ YI F G P LV + L F+ LG F S F++ + L Sbjct: 106 TSSIAWFYIWFFR--GTPQLV-VWFNLGLVFEYINLGPFYRDEWSDFMTPFLTALLGLGL 162 Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335 AA++AEI R+GL+AV GQ EAA ALG++H K R +++PQAMR I+PP ++ +N+L Sbjct: 163 NEAAYMAEICRAGLLAVDEGQTEAAHALGMSHTKTLRRIVVPQAMRVIVPPTGNEVINML 222 Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378 K +SL V +A+L V I +G E++ + YL L+ Sbjct: 223 KTTSLVSVVQYAELFRVAQDIGQTSGAPAEMLFLAAAWYLLLT 265 >gi|297157335|gb|ADI07047.1| permease [Streptomyces bingchenggensis BCW-1] Length = 314 Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 76/239 (31%), Positives = 121/239 (50%), Gaps = 20/239 (8%) Query: 158 IPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGK 217 IPD+ F ++R L +T+ V VLGI+L++ RLS++ Sbjct: 59 IPDY--------FFDDRILKGAGMTVWITIASMVLGVVLGILLAVM--RLSKN---PVSA 105 Query: 218 ALPLLYISTFLIFGLPTLV--LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSC 275 A+ YI F G P V L+ L F LG S F++ + L Sbjct: 106 AIAWGYIWFFR--GTPVYVQLLVWFNLGLIFHYINLGPIYQDEWSDFMTPFLAALLGLGL 163 Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335 AA++AEI R+GL+AV GQ EAA ALG++H K R ++LPQAMR I+PP ++++N+L Sbjct: 164 NEAAYMAEICRAGLLAVDEGQTEAAHALGMSHAKTLRRIVLPQAMRVIVPPTGNEFINML 223 Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL---FMNRLNAK 391 K +SL V + +L+ I +G E++ + YL L+ ++++ ++ R A+ Sbjct: 224 KTTSLLAVVQYGELLRGAQDIAQDSGSTTEMLFLAALWYLILTSVLSVGQYYLERYYAR 282 >gi|304317591|ref|YP_003852736.1| polar amino acid ABC transporter inner membrane protein [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|302779093|gb|ADL69652.1| polar amino acid ABC transporter, inner membrane subunit [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 220 Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 47/129 (36%), Positives = 85/129 (65%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P F+ IALS +A ++AEI+RSG+ AV GQMEA+ +LG++H A R V++PQA+++I Sbjct: 86 PGFVVGIIALSMNSAGYVAEIIRSGIQAVDPGQMEASRSLGMSHSMAMRYVIIPQAIKNI 145 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 +P L ++++ +LK SS+ +GFADL + + T +A E ++I IY ++++ + Sbjct: 146 LPALGNEFVVMLKESSIVSVIGFADLTRQAEIVSSVTYRAFEPLIIIAAIYFIMTLVFSR 205 Query: 384 FMNRLNAKI 392 +++ ++ Sbjct: 206 LLSKFERRL 214 >gi|224372630|ref|YP_002607002.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Nautilia profundicola AmH] gi|223589466|gb|ACM93202.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Nautilia profundicola AmH] Length = 272 Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 65/201 (32%), Positives = 109/201 (54%), Gaps = 11/201 (5%) Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251 FSF++G S+F ++R K K +LYI L+ P L++I + + F PV Sbjct: 77 FSFIIG---SIFG--IARWSSIKIIKIPAILYIE--LLRATPLLMVI---FWVFFAIPVF 126 Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311 F + VSP ++ IA + +T+A++AEIVR+G+ ++P+GQ EAA +LG + Sbjct: 127 SMAFFHTQAHVSPTVAAI-IAFTLFTSAYVAEIVRAGINSIPKGQFEAAKSLGFNSTQTF 185 Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371 ++LPQA R +IP SQ++ L K++SLA +G + I N+ + EI Sbjct: 186 IYIILPQAYRKMIPAFVSQFVALFKDTSLAYTIGVIEFFRAATIINNRLYLSFEIFSFVA 245 Query: 372 FIYLSLSIMIALFMNRLNAKI 392 +Y S++ ++ F + L K+ Sbjct: 246 LVYFSIAFSMSKFSHMLEKKV 266 >gi|121600257|ref|YP_992993.1| binding-protein-dependent transport system inner membrane component [Burkholderia mallei SAVP1] gi|121229067|gb|ABM51585.1| binding-protein-dependent transport system inner membrane component [Burkholderia mallei SAVP1] Length = 320 Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 47/96 (48%), Positives = 67/96 (69%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 EF++ ++ LS YT+AF+AE ++GL VP GQ AA ALGL+ +A R V+LPQA+R + Sbjct: 186 EFVAGWLGLSGYTSAFVAEEFQAGLRGVPAGQHHAASALGLSPLQAFRFVVLPQAVRIAL 245 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 PPL QY+NL+KNSSL +A+G A+L + +T Sbjct: 246 PPLFGQYMNLIKNSSLTMAIGVAELSYASRQVETET 281 >gi|167564083|ref|ZP_02356999.1| hypothetical protein BoklE_16117 [Burkholderia oklahomensis EO147] Length = 246 Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 49/128 (38%), Positives = 78/128 (60%), Gaps = 1/128 (0%) Query: 265 EFMSLYIA-LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 +F + IA L +T A + E VRSG+ A+PRGQ A +A+G T + R VLLP A R I Sbjct: 109 QFFTASIACLGLFTGARVCEQVRSGINALPRGQRAAGLAMGFTQWQTYRYVLLPVAYRII 168 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 +PPLTS++LN+ KNS++A +G DL + +++ T Q E + Y+ +++++ Sbjct: 169 VPPLTSEFLNIFKNSAVASTIGLLDLSAQARQLVDYTAQTYESFIAVTLAYVIINLVVMS 228 Query: 384 FMNRLNAK 391 FM + +K Sbjct: 229 FMRWVESK 236 Score = 42.0 bits (97), Expect = 0.15, Method: Compositional matrix adjust. Identities = 26/77 (33%), Positives = 42/77 (54%) Query: 81 SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140 ++Y ++ GF T ++ + + A ++G+L G R NK ++ I VYV +FRNIP Sbjct: 18 EPTTYLGWLMSGFWVTVKVSLAAWLIALVVGSLFGVLRTVPNKWLSAIGTVYVSIFRNIP 77 Query: 141 PLVVIFFLYKSVLSVLP 157 +V F Y V +LP Sbjct: 78 LIVQFFVWYLVVPELLP 94 >gi|227512776|ref|ZP_03942825.1| glutamine ABC superfamily ATP binding cassette transporter, permease protein [Lactobacillus buchneri ATCC 11577] gi|227522900|ref|ZP_03952949.1| glutamine ABC superfamily ATP binding cassette transporter, permease protein [Lactobacillus hilgardii ATCC 8290] gi|227083976|gb|EEI19288.1| glutamine ABC superfamily ATP binding cassette transporter, permease protein [Lactobacillus buchneri ATCC 11577] gi|227089929|gb|EEI25241.1| glutamine ABC superfamily ATP binding cassette transporter, permease protein [Lactobacillus hilgardii ATCC 8290] Length = 235 Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 66/215 (30%), Positives = 110/215 (51%), Gaps = 31/215 (14%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPTLVLIALKYQL 244 V S++ G++L + ++ G + LPL+ I F FGLP L Sbjct: 32 VLSYIFGVILGVTRYVQIKYLSAIVGFVIDIIRNLPLILIIFFTYFGLPHL--------- 82 Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304 G P + S+ IA++ + AA +AEIVR+G++++P GQME A A G Sbjct: 83 --------------GFKPDPIWASV-IAMAVFEAAMVAEIVRAGIVSIPTGQMEGARANG 127 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ-TGQA 363 L++ +A ++LPQA+R++IP + SQ+++L+K++SLA + DL++ I Q T Sbjct: 128 LSYWQALWYIVLPQAIRNMIPAIVSQFISLVKDTSLATIIVLPDLMNHAQIIYGQNTNYT 187 Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 I + L +Y + ++LF L +I KK Sbjct: 188 IPMFLALAVMYFIVCYSLSLFSKYLEKRIGGGNKK 222 >gi|254197953|ref|ZP_04904375.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Burkholderia pseudomallei S13] gi|169654694|gb|EDS87387.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Burkholderia pseudomallei S13] Length = 315 Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 47/96 (48%), Positives = 67/96 (69%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 EF++ ++ LS YT+AF+AE ++GL VP GQ AA ALGL+ +A R V+LPQA+R + Sbjct: 181 EFVAGWLGLSGYTSAFVAEEFQAGLRGVPAGQHHAASALGLSPLQAFRFVVLPQAVRIAL 240 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 PPL QY+NL+KNSSL +A+G A+L + +T Sbjct: 241 PPLFGQYMNLIKNSSLTMAIGVAELSYASRQVETET 276 >gi|325964013|ref|YP_004241919.1| amino acid ABC transporter membrane protein 1, PAAT family [Arthrobacter phenanthrenivorans Sphe3] gi|323470100|gb|ADX73785.1| amino acid ABC transporter membrane protein 1, PAAT family [Arthrobacter phenanthrenivorans Sphe3] Length = 216 Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 53/127 (41%), Positives = 81/127 (63%), Gaps = 1/127 (0%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IALS YTAAFIAE VRSG+ +VP GQ EAA ++G+ + L++LPQA+R+++PPL + Sbjct: 90 IALSTYTAAFIAEAVRSGVNSVPVGQAEAARSIGMNFGQVLNLIILPQALRTVVPPLINI 149 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA-IEIILIWMFIYLSLSIMIALFMNRLN 389 + L+KNSS+A A +L G + N G A I ++L F YL L++ + + + + Sbjct: 150 LIALVKNSSVAGAFFVLELFGYGRQLANANGDAVIAVLLGTAFFYLLLTVPLGILASTVE 209 Query: 390 AKIALKE 396 K+A+ Sbjct: 210 RKVAIAR 216 Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust. Identities = 25/57 (43%), Positives = 34/57 (59%), Gaps = 2/57 (3%) Query: 92 GFVNTFWL-AFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147 GF+ T +L A SG+I A ++GTL+ A R+S + VYVEV RN P + FF Sbjct: 14 GFLRTLFLSAVSGVI-ALVLGTLLAAARVSPVAALRGFSMVYVEVLRNTPLTIAFFF 69 >gi|296134852|ref|YP_003642094.1| polar amino acid ABC transporter, inner membrane subunit [Thiomonas intermedia K12] gi|295794974|gb|ADG29764.1| polar amino acid ABC transporter, inner membrane subunit [Thiomonas intermedia K12] Length = 228 Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 78/234 (33%), Positives = 131/234 (55%), Gaps = 22/234 (9%) Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223 VLPF + +GL++ T+ + A I +LGI+L+L RLS H K L Y Sbjct: 12 VLPFLL----KGLTY-TIQLTVVAAIG--GTLLGILLAL--ARLS---HLKWLSLLAAGY 59 Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF---MSLYIALSCYTAAF 280 I+ L+ +P L++I + +F PV+ Q I GS P+ S Y + AA+ Sbjct: 60 IN--LMRSIPLLLVI---FWFYFLVPVMLQS--ITGSDYPPKIGAERSAYFTFILFEAAY 112 Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340 AEIVR+G+ ++P+GQ+ AA ALGLT+ ++ RL++LPQA+R+++P L +Q + L ++ SL Sbjct: 113 FAEIVRAGIQSIPKGQLGAAYALGLTYAQSMRLIILPQALRNMLPVLLTQTIVLFQDVSL 172 Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394 + D V I + + +E+ + +Y LS +++ + RL+ +IA+ Sbjct: 173 VALLNVTDFVGAAMKIAQRDSRVVEMYTLVAVVYFVLSFLLSQGVKRLHQRIAI 226 Score = 36.2 bits (82), Expect = 9.9, Method: Compositional matrix adjust. Identities = 21/61 (34%), Positives = 33/61 (54%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G T L I T++G L+ RLS K ++ + Y+ + R+IP L+VIF+ Sbjct: 16 LLKGLTYTIQLTVVAAIGGTLLGILLALARLSHLKWLSLLAAGYINLMRSIPLLLVIFWF 75 Query: 149 Y 149 Y Sbjct: 76 Y 76 >gi|156972753|ref|YP_001443660.1| ABC-type amino acid transport system permease component [Vibrio harveyi ATCC BAA-1116] gi|156524347|gb|ABU69433.1| hypothetical protein VIBHAR_00418 [Vibrio harveyi ATCC BAA-1116] Length = 246 Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 61/210 (29%), Positives = 112/210 (53%), Gaps = 29/210 (13%) Query: 191 VFSFVLGIVLSLFATRLS------RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244 +F+ +G++++L A S + + +++P+L + ++ +G+PTL+ ++L + Sbjct: 57 LFAMTIGLIVALPALSDSPALKWINRVYVEVIRSIPVLVLLLWVYYGMPTLLDVSLNH-- 114 Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304 F + IAL+ +AF+AE+ R G+ A+ RGQ EAA +LG Sbjct: 115 ---------------------FWAGVIALTIAESAFMAEVFRGGIQAISRGQHEAAESLG 153 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364 L + + RLV+LPQA R I+PPL +Q++ +LK SSL +G +DL ++ + Sbjct: 154 LNYWQKMRLVILPQAFRQILPPLGNQFVYILKMSSLVSVIGLSDLTRRANELVVNEYLPL 213 Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIAL 394 EI + YL L ++++ + L +IA+ Sbjct: 214 EIYTFLVLEYLVLILLVSQAVRWLEKRIAI 243 Score = 45.1 bits (105), Expect = 0.018, Method: Compositional matrix adjust. Identities = 25/70 (35%), Positives = 43/70 (61%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 ++ GF +T ++ M+ A IG +V LS + + WI RVYVEV R+IP LV++ ++ Sbjct: 41 LVAGFNDTIQVSLLSMLFAMTIGLIVALPALSDSPALKWINRVYVEVIRSIPVLVLLLWV 100 Query: 149 YKSVLSVLPI 158 Y + ++L + Sbjct: 101 YYGMPTLLDV 110 >gi|134282420|ref|ZP_01769125.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Burkholderia pseudomallei 305] gi|134246458|gb|EBA46547.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Burkholderia pseudomallei 305] Length = 315 Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 47/96 (48%), Positives = 67/96 (69%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 EF++ ++ LS YT+AF+AE ++GL VP GQ AA ALGL+ +A R V+LPQA+R + Sbjct: 181 EFVAGWLGLSGYTSAFVAEEFQAGLRGVPAGQHHAASALGLSPLQAFRFVVLPQAVRIAL 240 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 PPL QY+NL+KNSSL +A+G A+L + +T Sbjct: 241 PPLFGQYMNLIKNSSLTMAIGVAELSYASRQVETET 276 >gi|307710648|ref|ZP_07647081.1| binding-protein-dependent transport system inner membrane component family protein [Streptococcus mitis SK564] gi|307618591|gb|EFN97734.1| binding-protein-dependent transport system inner membrane component family protein [Streptococcus mitis SK564] Length = 233 Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 51/131 (38%), Positives = 77/131 (58%), Gaps = 3/131 (2%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P + + + + Y A+IAE++RSG+ ++P GQMEAA++ G T+ A RL++LPQA R I Sbjct: 91 PIYWTAVLCVGLYHGAYIAEVIRSGIQSIPSGQMEAALSQGFTYISAMRLIILPQAFRII 150 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 +PPLT+Q +NL+KN+S + DL+ V + G I L +Y SL +A Sbjct: 151 LPPLTNQIVNLIKNTSTVAIISGVDLMFVTKSWSALNGNYIPAFLGAALLYFSLCFPVAQ 210 Query: 384 F---MNRLNAK 391 F M + N K Sbjct: 211 FGRKMEQANKK 221 >gi|24112048|ref|NP_706558.1| glutamate/aspartate transport system permease [Shigella flexneri 2a str. 301] gi|30062159|ref|NP_836330.1| glutamate/aspartate transport system permease [Shigella flexneri 2a str. 2457T] gi|157160141|ref|YP_001457459.1| glutamate/aspartate ABC transporter, permease protein GltK [Escherichia coli HS] gi|170020990|ref|YP_001725944.1| polar amino acid ABC transporter, inner membrane subunit [Escherichia coli ATCC 8739] gi|188495911|ref|ZP_03003181.1| glutamate/aspartate ABC transporter, permease protein GltK [Escherichia coli 53638] gi|300920531|ref|ZP_07136957.1| ABC transporter, permease protein [Escherichia coli MS 115-1] gi|24050872|gb|AAN42265.1| glutamate/aspartate transport system permease [Shigella flexneri 2a str. 301] gi|30040404|gb|AAP16136.1| glutamate/aspartate transport system permease [Shigella flexneri 2a str. 2457T] gi|157065821|gb|ABV05076.1| glutamate/aspartate ABC transporter, permease protein GltK [Escherichia coli HS] gi|169755918|gb|ACA78617.1| polar amino acid ABC transporter, inner membrane subunit [Escherichia coli ATCC 8739] gi|188491110|gb|EDU66213.1| glutamate/aspartate ABC transporter, permease protein GltK [Escherichia coli 53638] gi|281600012|gb|ADA72996.1| Glutamate/aspartate transport system permease [Shigella flexneri 2002017] gi|300412470|gb|EFJ95780.1| ABC transporter, permease protein [Escherichia coli MS 115-1] gi|313649701|gb|EFS14125.1| amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Shigella flexneri 2a str. 2457T] Length = 224 Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 45/129 (34%), Positives = 81/129 (62%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 +S +A S + AA+ +EI+R+G+ ++ RGQ AA+ALG+TH ++ +L++LPQA R+++ Sbjct: 96 RLISAMVAFSMFEAAYYSEIIRAGIQSISRGQSSAALALGMTHWQSMKLIILPQAFRAMV 155 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 P L +Q + L +++SL + AD TI + G +E+IL F+Y +S+ +L Sbjct: 156 PLLLTQGIVLFQDTSLVYVLSLADFFRTASTIGERDGTQVEMILFAGFVYFVISLSASLL 215 Query: 385 MNRLNAKIA 393 ++ L + A Sbjct: 216 VSYLKRRTA 224 Score = 40.0 bits (92), Expect = 0.63, Method: Compositional matrix adjust. Identities = 28/92 (30%), Positives = 49/92 (53%), Gaps = 10/92 (10%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G V T + + ++ + GT++ RLS+ V+W + YV VFR+IP ++V+ + Sbjct: 16 LLDGLVITLKITVTAVVIGILWGTMLAVMRLSSFAPVSWFAKAYVNVFRSIPLVMVLLWF 75 Query: 149 Y-------KSVLSVLPIPD---HSIVLPFGMF 170 Y ++VL + P D S ++ F MF Sbjct: 76 YLIVPGFLQNVLGLSPKNDIRLISAMVAFSMF 107 >gi|295835695|ref|ZP_06822628.1| glutamate permease [Streptomyces sp. SPB74] gi|197698111|gb|EDY45044.1| glutamate permease [Streptomyces sp. SPB74] Length = 214 Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 51/122 (41%), Positives = 78/122 (63%), Gaps = 2/122 (1%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +AL CYT+AFI E +RSG+ VP+GQ EAA +LG++ + V+LPQA RS+IPP+ SQ Sbjct: 89 LALGCYTSAFICEALRSGINTVPKGQGEAARSLGMSFGQTLTAVILPQAFRSVIPPVGSQ 148 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI-YLSLSIMIALFMNRLN 389 + L KNS++A A +L+ T +N+ G I + +W+ + YL L++ I+ N L Sbjct: 149 LIALAKNSAIAGAFSVTELLGTYKT-LNELGFDIVWVFVWIAVGYLLLTLAISALFNYLE 207 Query: 390 AK 391 + Sbjct: 208 HR 209 >gi|312898833|ref|ZP_07758221.1| putative glutamine ABC transporter permease protein [Megasphaera micronuciformis F0359] gi|310619995|gb|EFQ03567.1| putative glutamine ABC transporter permease protein [Megasphaera micronuciformis F0359] Length = 219 Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 66/206 (32%), Positives = 119/206 (57%), Gaps = 17/206 (8%) Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252 F+LG+++S+ RLS K KA+ + Y++ +I G P LV I L Y F P Sbjct: 31 GFLLGLIISV--CRLS---GIKLLKAVSVCYVN--VIRGTPMLVQIFLIY---FALPQ-- 78 Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312 + G+ + P F++ +A S + A+++EI R+G+ +V +GQMEA +LGL+ + Sbjct: 79 ----VLGTRIDP-FLAAVLACSINSGAYVSEIFRAGIQSVDKGQMEAGRSLGLSWMQTMF 133 Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372 ++LPQA + +IPPL ++++++ K ++ +GF +L G II++T A+EI L Sbjct: 134 YIILPQAFKHVIPPLGNEFISMTKETAQVSVIGFEELTRRGQLIISKTYGALEIWLAVAV 193 Query: 373 IYLSLSIMIALFMNRLNAKIALKEKK 398 +YL +++ IA ++ L + A ++ Sbjct: 194 LYLIMTLGIAQLVSYLERRFATDDRN 219 >gi|187733618|ref|YP_001879338.1| glutamate/aspartate ABC transporter permease GltK [Shigella boydii CDC 3083-94] gi|187430610|gb|ACD09884.1| glutamate/aspartate ABC transporter, permease protein GltK [Shigella boydii CDC 3083-94] Length = 224 Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 45/129 (34%), Positives = 81/129 (62%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 +S +A S + AA+ +EI+R+G+ ++ RGQ AA+ALG+TH ++ +L++LPQA R+++ Sbjct: 96 RLISAMVAFSMFEAAYYSEIIRAGIQSISRGQSSAALALGMTHWQSMKLIILPQAFRAMV 155 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 P L +Q + L +++SL + AD TI + G +E+IL F+Y +S+ +L Sbjct: 156 PLLLTQGIVLFQDTSLVYVLSLADFFRTASTIGERDGTQVEMILFAGFVYFVISLSASLL 215 Query: 385 MNRLNAKIA 393 ++ L + A Sbjct: 216 VSYLKRRTA 224 Score = 42.0 bits (97), Expect = 0.15, Method: Compositional matrix adjust. Identities = 24/68 (35%), Positives = 39/68 (57%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G V T + + ++ + GT++ RLS+ VAW + YV VFR+IP ++V+ + Sbjct: 16 LLDGLVITLKITVTAVVIGILWGTMLAVMRLSSFAPVAWFAKAYVNVFRSIPLVMVLLWF 75 Query: 149 YKSVLSVL 156 Y VL L Sbjct: 76 YLIVLGFL 83 >gi|313902270|ref|ZP_07835675.1| polar amino acid ABC transporter, inner membrane subunit [Thermaerobacter subterraneus DSM 13965] gi|313467421|gb|EFR62930.1| polar amino acid ABC transporter, inner membrane subunit [Thermaerobacter subterraneus DSM 13965] Length = 375 Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 70/210 (33%), Positives = 112/210 (53%), Gaps = 20/210 (9%) Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251 SF LG++L+L R +AL + YI L+ G P +V+ L F L Sbjct: 182 LSFPLGVLLAL-----GRVSSLPVVRALSIAYIE--LVRGTPLMVV------LFFSMTAL 228 Query: 252 GQFNFIGGSTVSPEFMSLYIA-LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 F +V P+ ++ A L +TAA++AE VR GL VPRGQ+EAA ALGLT +A Sbjct: 229 PLFL---PPSVRPDLVTRAAAGLVLFTAAYVAEAVRGGLQGVPRGQVEAAQALGLTGTQA 285 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT---GQAIEII 367 L++LPQA+R++IP L Q+++L K++SL G + V V ++++ G+ +E+ Sbjct: 286 VLLIILPQALRAVIPALVGQFISLFKDTSLVAVWGLLEFVGVAQSVLSNPSYLGRHVEMY 345 Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 +Y ++L RL ++ + E+ Sbjct: 346 AFVAAVYWVFCYGMSLASRRLERRLGVGER 375 >gi|220913268|ref|YP_002488577.1| polar amino acid ABC transporter inner membrane protein [Arthrobacter chlorophenolicus A6] gi|219860146|gb|ACL40488.1| polar amino acid ABC transporter, inner membrane subunit [Arthrobacter chlorophenolicus A6] Length = 216 Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 54/127 (42%), Positives = 81/127 (63%), Gaps = 1/127 (0%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IALS YTAAFIAE VRSG+ +VP GQ EAA ++G+ + L++LPQA+R++IPPL + Sbjct: 90 IALSTYTAAFIAEAVRSGVNSVPVGQAEAARSIGMGFGQVLSLIILPQALRTVIPPLINI 149 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA-IEIILIWMFIYLSLSIMIALFMNRLN 389 + L+KNSS+A A +L G + N G A I ++L F YL L++ + + + + Sbjct: 150 LIALVKNSSVAGAFFVLELFGYGRQLANANGDAVITVLLGTAFFYLLLTVPLGILASTVE 209 Query: 390 AKIALKE 396 K+A+ Sbjct: 210 RKVAIAR 216 Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust. Identities = 25/57 (43%), Positives = 34/57 (59%), Gaps = 2/57 (3%) Query: 92 GFVNTFWL-AFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147 GF+ T +L A SG+I A ++GTL+ A R+S + VYVEV RN P + FF Sbjct: 14 GFLRTLFLSAVSGVI-ALVLGTLLAAARVSPVAALRGFSTVYVEVLRNTPLTIAFFF 69 >gi|260425536|ref|ZP_05779516.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Citreicella sp. SE45] gi|260423476|gb|EEX16726.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Citreicella sp. SE45] Length = 263 Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 67/211 (31%), Positives = 113/211 (53%), Gaps = 16/211 (7%) Query: 190 FVFSFVLGI---VLSLFATRLSRH---FHEKTGKALPLLYISTFLIFGL-PTLVLIALKY 242 F + LG+ ++SL RL R F+ + + +P+L + ++ F L P LV Sbjct: 55 FALASALGMGVALMSLSDHRLPRQLARFYTEIVRGIPMLVLLLYVAFVLAPALV------ 108 Query: 243 QLHFDKPVLGQFNFIGGSTVS-PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301 LG T P +AL+ +AFIAE+ R+GL++V GQ+EAA Sbjct: 109 --ELRNWALGWLGVEPARTRDFPLVWRAILALTIGYSAFIAEVFRAGLLSVDEGQVEAAQ 166 Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361 ALGL+ + RL++LPQA+R+I+PPL + ++ ++K+SSL +G D+ +G Sbjct: 167 ALGLSRYQRFRLIVLPQAIRTILPPLGNDFVAMVKDSSLVSVLGVLDVTQLGKVTAAGNF 226 Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 + E + IYL+++I ++L + RL A++ Sbjct: 227 RYFETYNVVALIYLTMTITLSLALRRLEARL 257 >gi|269127496|ref|YP_003300866.1| polar amino acid ABC transporter inner membrane subunit [Thermomonospora curvata DSM 43183] gi|268312454|gb|ACY98828.1| polar amino acid ABC transporter, inner membrane subunit [Thermomonospora curvata DSM 43183] Length = 343 Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 67/177 (37%), Positives = 98/177 (55%), Gaps = 19/177 (10%) Query: 197 GIVLSLFATRLSRHFHEKTG--------KALPLLYISTFLIFGLPTLV--LIALKYQLHF 246 GIV L RLS H+ + +A+PLL I FL F +P + +IA + Sbjct: 89 GIVFGL--ARLSDHWWIRWPAGAVVEFFRAIPLL-ILIFLAFFVPPAISPIIADSPLGNL 145 Query: 247 DKPVLGQFNFI------GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300 + V+ F+ G+ P F +L L Y + +AE+VR+G++AVPRGQ EAA Sbjct: 146 QRIVVQNVLFVFGVEINAGNVTVPAFAALVFGLVMYNGSVLAEVVRAGVLAVPRGQSEAA 205 Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII 357 ALGL RLVLLPQA+ +++P + SQ + LLK+++L + FADL+S G I+ Sbjct: 206 YALGLRKNAVMRLVLLPQAITAMMPAVVSQMVVLLKDTALGFVIAFADLLSAGFRIV 262 >gi|227358520|ref|ZP_03842845.1| glutamate/aspartate ABC superfamily ATP binding cassette transporter, permease protein [Proteus mirabilis ATCC 29906] gi|227161231|gb|EEI46305.1| glutamate/aspartate ABC superfamily ATP binding cassette transporter, permease protein [Proteus mirabilis ATCC 29906] Length = 264 Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 49/129 (37%), Positives = 80/129 (62%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+S + L +TAA + E VR+ + ++PRGQ A +ALGLT + R VLLP A R IIP Sbjct: 129 FVSSALCLGLFTAARMCEQVRAAINSLPRGQKAAGLALGLTLPQTYRYVLLPNAYRVIIP 188 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 P+TS+ LNL+KNS++A +G D+ + +++ + +A E Y+ ++++I L M Sbjct: 189 PMTSEMLNLVKNSAIASTIGLIDMAAQANKLLDYSAKAYESFTAITLAYVFINVIIMLIM 248 Query: 386 NRLNAKIAL 394 + L ++ L Sbjct: 249 HWLEKRVRL 257 Score = 43.1 bits (100), Expect = 0.079, Method: Compositional matrix adjust. Identities = 30/97 (30%), Positives = 50/97 (51%), Gaps = 5/97 (5%) Query: 65 SERAGFEIDQGI----VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLS 120 E + D GI P+ +++Y ++ GF T L+ I A I+G+ G R Sbjct: 16 GEIMSIDWDWGIFFQEAPF-GNTTYLGWLISGFQVTVALSLCAWIIAFIVGSFFGILRTV 74 Query: 121 ANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLP 157 N+L++ + +YVE+FRN+P +V F Y + +LP Sbjct: 75 PNRLLSSLGAIYVELFRNVPLIVQFFTWYLVIPELLP 111 >gi|241113736|ref|YP_002973571.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240861944|gb|ACS59610.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 309 Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 67/215 (31%), Positives = 117/215 (54%), Gaps = 10/215 (4%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 V + +GIVL L ++R +++ ++L L+I F G P LV + Y L P Sbjct: 81 VVAMAIGIVLGL-GLAIARLSNDRLARSLASLFIWFFR--GTPLLVQLIFWYNLSTLFPQ 137 Query: 251 LGQFNFIGGSTVSPEFMSLY-------IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 L G + S E S+ + L+ AA++AEI+R GL++V RGQ E A A Sbjct: 138 LSIAIPFGPTLASWETNSVITPMTAAIVGLALNEAAYMAEIIRGGLLSVDRGQFETAEAF 197 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363 G+T +A +++PQAMRSI+PP +Q ++++K +SL + ADL+ +I N+T + Sbjct: 198 GMTKARALWRIIIPQAMRSIVPPTGNQLISMIKATSLVSVIAMADLLYSVQSIYNRTFEI 257 Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 + ++L+ + YL ++ ++ L + + A E++ Sbjct: 258 VPMLLVAVLWYLLITSILNLGQSYIEAYYGRSERR 292 >gi|320178443|gb|EFW53411.1| Glutamate Aspartate transport system permease protein GltK [Shigella boydii ATCC 9905] gi|332094325|gb|EGI99376.1| amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Shigella boydii 5216-82] Length = 224 Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 45/129 (34%), Positives = 81/129 (62%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 +S +A S + AA+ +EI+R+G+ ++ RGQ AA+ALG+TH ++ +L++LPQA R+++ Sbjct: 96 RLISAMVAFSMFEAAYYSEIIRAGIKSISRGQSSAALALGMTHWQSMKLIILPQAFRAMV 155 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 P L +Q + L +++SL + AD TI + G +E+IL F+Y +S+ +L Sbjct: 156 PLLLTQGIVLFQDTSLVYVLSLADFFRTASTIGERDGTQVEMILFAGFVYFVISLSASLL 215 Query: 385 MNRLNAKIA 393 ++ L + A Sbjct: 216 VSYLKRRTA 224 Score = 41.2 bits (95), Expect = 0.28, Method: Compositional matrix adjust. Identities = 29/92 (31%), Positives = 49/92 (53%), Gaps = 10/92 (10%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G V T + + ++ + GT++ RLS+ VAW + YV VFR+IP ++V+ + Sbjct: 16 LLDGLVITLKITVTAVVIGILWGTMLAVMRLSSFAPVAWFAKAYVNVFRSIPLVMVLLWF 75 Query: 149 Y-------KSVLSVLPIPD---HSIVLPFGMF 170 Y ++VL + P D S ++ F MF Sbjct: 76 YLIVPGFLQNVLGLSPKNDIRLISAMVAFSMF 107 >gi|315292092|gb|EFU51444.1| ABC transporter, permease protein [Escherichia coli MS 153-1] Length = 224 Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 45/129 (34%), Positives = 81/129 (62%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 +S +A S + AA+ +EI+R+G+ ++ RGQ AA+ALG+TH ++ +L++LPQA R+++ Sbjct: 96 RLISAMVAFSMFEAAYYSEIIRAGIQSISRGQSSAALALGMTHWQSMKLIILPQAFRAMV 155 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 P L +Q + L +++SL + AD TI + G +E+IL F+Y +S+ +L Sbjct: 156 PLLLTQGIVLFQDTSLVYVLSLADFFRTASTIGERDGTQVEMILFAGFVYFVISLSASLL 215 Query: 385 MNRLNAKIA 393 ++ L + A Sbjct: 216 VSYLKRRTA 224 Score = 41.2 bits (95), Expect = 0.32, Method: Compositional matrix adjust. Identities = 29/92 (31%), Positives = 49/92 (53%), Gaps = 10/92 (10%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G V T + + ++ + GT++ RLS+ VAW + YV VFR+IP ++V+ + Sbjct: 16 LLDGLVITLKITVTAVVIGILWGTMLAVMRLSSFAPVAWFAKAYVNVFRSIPLVMVLLWF 75 Query: 149 Y-------KSVLSVLPIPD---HSIVLPFGMF 170 Y ++VL + P D S ++ F MF Sbjct: 76 YLIVPGFLQNVLGLSPKNDIRLISAMVAFSMF 107 >gi|170767753|ref|ZP_02902206.1| glutamate/aspartate ABC transporter, permease protein GltK [Escherichia albertii TW07627] gi|170123241|gb|EDS92172.1| glutamate/aspartate ABC transporter, permease protein GltK [Escherichia albertii TW07627] Length = 224 Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 45/129 (34%), Positives = 81/129 (62%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 +S +A S + AA+ +EI+R+G+ ++ RGQ AA+ALG+TH ++ +L++LPQA R+++ Sbjct: 96 RLISAMVAFSMFEAAYYSEIIRAGIQSISRGQSSAALALGMTHWQSMKLIILPQAFRAMV 155 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 P L +Q + L +++SL + AD TI + G +E+IL F+Y +S+ +L Sbjct: 156 PLLLTQGIVLFQDTSLVYVLSLADFFRTASTIGERDGTQVEMILFAGFVYFVISLSASLL 215 Query: 385 MNRLNAKIA 393 ++ L + A Sbjct: 216 ISYLKRRTA 224 Score = 41.6 bits (96), Expect = 0.20, Method: Compositional matrix adjust. Identities = 29/92 (31%), Positives = 49/92 (53%), Gaps = 10/92 (10%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G V T + + ++ + GT++ RLS+ VAW + YV VFR+IP ++V+ + Sbjct: 16 LLDGLVITLKITVTAVVIGILWGTMLAVMRLSSFAPVAWFAKAYVNVFRSIPLVMVLLWF 75 Query: 149 Y-------KSVLSVLPIPD---HSIVLPFGMF 170 Y ++VL + P D S ++ F MF Sbjct: 76 YLIVPGFLQNVLGLSPKTDIRLISAMVAFSMF 107 >gi|134294748|ref|YP_001118483.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia vietnamiensis G4] gi|134137905|gb|ABO53648.1| L-glutamate ABC transporter membrane protein / L-aspartate ABC transporter membrane protein [Burkholderia vietnamiensis G4] Length = 246 Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 46/129 (35%), Positives = 76/129 (58%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + + L +T A + E VRSG+ A+P+GQ A +A+G T + R VLLP A R I+P Sbjct: 111 FTASIVCLGLFTGARVCEQVRSGINALPKGQRAAGLAMGFTQWQTYRYVLLPVAYRIIVP 170 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PLTS++LN+ KNS++A +G DL + +++ T Q E + Y+ +++++ FM Sbjct: 171 PLTSEFLNIFKNSAVASTIGLLDLSAQARQLVDYTAQTYESFIAVTLAYVVINLVVMAFM 230 Query: 386 NRLNAKIAL 394 + + L Sbjct: 231 RWIEGRTRL 239 Score = 42.0 bits (97), Expect = 0.15, Method: Compositional matrix adjust. Identities = 27/77 (35%), Positives = 41/77 (53%) Query: 81 SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140 ++Y ++ GF T ++ + A I+G+L G R NK +A + VYV +FRNIP Sbjct: 18 EPTTYFGWLMSGFWVTIEVSLVAWVIALIVGSLFGVLRTVPNKWLAALGTVYVSIFRNIP 77 Query: 141 PLVVIFFLYKSVLSVLP 157 +V F Y V +LP Sbjct: 78 LIVQFFVWYLVVPELLP 94 >gi|169835617|ref|ZP_02868805.1| Amino acid transport system permease protein [candidate division TM7 single-cell isolate TM7a] Length = 194 Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 59/171 (34%), Positives = 92/171 (53%), Gaps = 13/171 (7%) Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287 +I G P LV + + Y + V G +NF+ P+ IA A+I EI+R Sbjct: 36 IIRGTPLLVQLLIMYYV-----VFGSYNFM------PKIFVAAIAFGINAGAYIGEIIRG 84 Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347 G+ ++ GQMEAA +LGL+ +A RLV+LPQA+++ +P L S+++ LLK +S+ +G Sbjct: 85 GIESIDNGQMEAARSLGLSSWQAMRLVILPQALKNSLPSLISEFIALLKETSIVGWIGLN 144 Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 D++ I QT A E + IYL+L+ + R+ K LKE Sbjct: 145 DIMRGADNIRFQTATAFESLFAAALIYLALTAIFTRVATRVERK--LKEDD 193 >gi|300697046|ref|YP_003747707.1| amino acid transmembrane ABC transporter protein [Ralstonia solanacearum CFBP2957] gi|299073770|emb|CBJ53291.1| putative amino acid transmembrane ABC transporter protein [Ralstonia solanacearum CFBP2957] Length = 262 Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 48/134 (35%), Positives = 84/134 (62%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 +F S +AL+ A+ AE +R+GL+AVP+GQ+EAA +LGL+ V+ PQA + + Sbjct: 128 DFTSACVALAFNAGAYNAESIRAGLLAVPKGQLEAAHSLGLSRWHTFADVIFPQAFKVAL 187 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 PPL + ++ LLK+SSLA A+G +L +VG + T Q + ++ IYL+L+ ++ F Sbjct: 188 PPLVNNFIALLKDSSLAYAIGVVELTNVGNRLQAATFQPLPALVTTAVIYLALTTVLTQF 247 Query: 385 MNRLNAKIALKEKK 398 N + ++ ++ ++ Sbjct: 248 SNAVEQRMDVEGRR 261 >gi|15800367|ref|NP_286379.1| glutamate/aspartate transport system permease [Escherichia coli O157:H7 EDL933] gi|15829946|ref|NP_308719.1| glutamate/aspartate transport system permease [Escherichia coli O157:H7 str. Sakai] gi|16128636|ref|NP_415186.1| glutamate and aspartate transporter subunit [Escherichia coli str. K-12 substr. MG1655] gi|26246627|ref|NP_752667.1| glutamate/aspartate transport system permease gltK [Escherichia coli CFT073] gi|74311189|ref|YP_309608.1| glutamate/aspartate transport system permease [Shigella sonnei Ss046] gi|82775930|ref|YP_402277.1| glutamate/aspartate transport system permease [Shigella dysenteriae Sd197] gi|89107522|ref|AP_001302.1| glutamate and aspartate transporter subunit [Escherichia coli str. K-12 substr. W3110] gi|91209694|ref|YP_539680.1| glutamate/aspartate transport system permease [Escherichia coli UTI89] gi|110640875|ref|YP_668603.1| glutamate/aspartate transport system permease protein GltK [Escherichia coli 536] gi|117622862|ref|YP_851775.1| glutamate/aspartate transport system permease [Escherichia coli APEC O1] gi|168752223|ref|ZP_02777245.1| glutamate/aspartate ABC transporter, permease protein GltK [Escherichia coli O157:H7 str. EC4113] gi|168758296|ref|ZP_02783303.1| glutamate/aspartate ABC transporter, permease protein GltK [Escherichia coli O157:H7 str. EC4401] gi|168764670|ref|ZP_02789677.1| glutamate/aspartate ABC transporter, permease protein GltK [Escherichia coli O157:H7 str. EC4501] gi|168767100|ref|ZP_02792107.1| glutamate/aspartate ABC transporter, permease protein GltK [Escherichia coli O157:H7 str. EC4486] gi|168777606|ref|ZP_02802613.1| glutamate/aspartate ABC transporter, permease protein GltK [Escherichia coli O157:H7 str. EC4196] gi|168779144|ref|ZP_02804151.1| glutamate/aspartate ABC transporter, permease protein GltK [Escherichia coli O157:H7 str. EC4076] gi|168786503|ref|ZP_02811510.1| glutamate/aspartate ABC transporter, permease protein GltK [Escherichia coli O157:H7 str. EC869] gi|168802437|ref|ZP_02827444.1| glutamate/aspartate ABC transporter, permease protein GltK [Escherichia coli O157:H7 str. EC508] gi|170080232|ref|YP_001729552.1| glutamate/aspartate ABC transporter membrane protein [Escherichia coli str. K-12 substr. DH10B] gi|170080333|ref|YP_001729653.1| glutamate/aspartate ABC transporter membrane protein [Escherichia coli str. K-12 substr. DH10B] gi|191168676|ref|ZP_03030456.1| glutamate/aspartate ABC transporter, permease protein GltK [Escherichia coli B7A] gi|191173970|ref|ZP_03035488.1| glutamate/aspartate ABC transporter, permease protein GltK [Escherichia coli F11] gi|193063459|ref|ZP_03044549.1| glutamate/aspartate ABC transporter, permease protein GltK [Escherichia coli E22] gi|193069122|ref|ZP_03050080.1| glutamate/aspartate ABC transporter, permease protein GltK [Escherichia coli E110019] gi|194429740|ref|ZP_03062256.1| glutamate/aspartate ABC transporter, permease protein GltK [Escherichia coli B171] gi|194439897|ref|ZP_03071960.1| glutamate/aspartate ABC transporter, permease protein GltK [Escherichia coli 101-1] gi|195939391|ref|ZP_03084773.1| glutamate/aspartate ABC transporter membrane protein [Escherichia coli O157:H7 str. EC4024] gi|208809671|ref|ZP_03252008.1| glutamate/aspartate ABC transporter, permease protein GltK [Escherichia coli O157:H7 str. EC4206] gi|208815262|ref|ZP_03256441.1| glutamate/aspartate ABC transporter, permease protein GltK [Escherichia coli O157:H7 str. EC4045] gi|208823066|ref|ZP_03263384.1| glutamate/aspartate ABC transporter, permease protein GltK [Escherichia coli O157:H7 str. EC4042] gi|209397952|ref|YP_002269288.1| glutamate/aspartate ABC transporter, permease protein GltK [Escherichia coli O157:H7 str. EC4115] gi|209917914|ref|YP_002291998.1| glutamate/aspartate ABC transporter permease [Escherichia coli SE11] gi|215485686|ref|YP_002328117.1| glutamate/aspartate transport system permease GltK; membrane component of ABC superfamily [Escherichia coli O127:H6 str. E2348/69] gi|217325840|ref|ZP_03441924.1| glutamate/aspartate ABC transporter, permease protein GltK [Escherichia coli O157:H7 str. TW14588] gi|218553195|ref|YP_002386108.1| glutamate and aspartate ABC transporter membrane protein [Escherichia coli IAI1] gi|218557584|ref|YP_002390497.1| glutamate and aspartate transporter subunit ; membrane component of ABC superfamily [Escherichia coli S88] gi|218688469|ref|YP_002396681.1| glutamate and aspartate ABC transporter membrane protein [Escherichia coli ED1a] gi|218694093|ref|YP_002401760.1| glutamate and aspartate transporter subunit ; membrane component of ABC superfamily [Escherichia coli 55989] gi|218699018|ref|YP_002406647.1| glutamate and aspartate ABC transporter membrane protein [Escherichia coli IAI39] gi|227884374|ref|ZP_04002179.1| glutamate/aspartate ABC superfamily ATP binding cassette transporter, permease protein GltK [Escherichia coli 83972] gi|237707380|ref|ZP_04537861.1| glutamate/aspartate transport system permease gltK [Escherichia sp. 3_2_53FAA] gi|238899930|ref|YP_002925726.1| glutamate and aspartate transporter subunit [Escherichia coli BW2952] gi|253774363|ref|YP_003037194.1| polar amino acid ABC transporter inner membrane subunit [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254160732|ref|YP_003043840.1| glutamate and aspartate transporter subunit [Escherichia coli B str. REL606] gi|254791817|ref|YP_003076654.1| glutamate and aspartate ABC transporter membrane protein [Escherichia coli O157:H7 str. TW14359] gi|256020605|ref|ZP_05434470.1| glutamate and aspartate transporter subunit, membrane component of ABC superfamily protein [Shigella sp. D9] gi|256023735|ref|ZP_05437600.1| glutamate and aspartate transporter subunit, membrane component of ABC superfamily protein [Escherichia sp. 4_1_40B] gi|260842879|ref|YP_003220657.1| glutamate/aspartate transport system permease GltK [Escherichia coli O103:H2 str. 12009] gi|260853904|ref|YP_003227795.1| glutamate/aspartate transport system permease GltK [Escherichia coli O26:H11 str. 11368] gi|260866801|ref|YP_003233203.1| glutamate/aspartate transport system permease GltK [Escherichia coli O111:H- str. 11128] gi|261224122|ref|ZP_05938403.1| glutamate and aspartate transporter subunit, membrane component of ABC superfamily protein [Escherichia coli O157:H7 str. FRIK2000] gi|261257816|ref|ZP_05950349.1| glutamate/aspartate transport system permease GltK [Escherichia coli O157:H7 str. FRIK966] gi|291281603|ref|YP_003498421.1| Glutamate/aspartate transport system permease protein gltK [Escherichia coli O55:H7 str. CB9615] gi|293413949|ref|ZP_06656598.1| glutamate/aspartate transport system permease gltK [Escherichia coli B185] gi|293418765|ref|ZP_06661200.1| glutamate/aspartate transport system permease gltK [Escherichia coli B088] gi|297519698|ref|ZP_06938084.1| Glutamate/aspartate transport system permease protein gltK [Escherichia coli OP50] gi|300817827|ref|ZP_07098041.1| ABC transporter, permease protein [Escherichia coli MS 107-1] gi|300823030|ref|ZP_07103164.1| ABC transporter, permease protein [Escherichia coli MS 119-7] gi|300907831|ref|ZP_07125447.1| ABC transporter, permease protein [Escherichia coli MS 84-1] gi|300927242|ref|ZP_07142973.1| ABC transporter, permease protein [Escherichia coli MS 182-1] gi|300931588|ref|ZP_07146900.1| ABC transporter, permease protein [Escherichia coli MS 187-1] gi|300937880|ref|ZP_07152672.1| ABC transporter, permease protein [Escherichia coli MS 21-1] gi|300951153|ref|ZP_07165017.1| ABC transporter, permease protein [Escherichia coli MS 116-1] gi|300959227|ref|ZP_07171303.1| ABC transporter, permease protein [Escherichia coli MS 175-1] gi|300989988|ref|ZP_07179064.1| ABC transporter, permease protein [Escherichia coli MS 45-1] gi|300996684|ref|ZP_07181509.1| ABC transporter, permease protein [Escherichia coli MS 200-1] gi|301025220|ref|ZP_07188789.1| ABC transporter, permease protein [Escherichia coli MS 69-1] gi|301028864|ref|ZP_07192039.1| ABC transporter, permease protein [Escherichia coli MS 196-1] gi|301049843|ref|ZP_07196782.1| ABC transporter, permease protein [Escherichia coli MS 185-1] gi|301302135|ref|ZP_07208268.1| ABC transporter, permease protein [Escherichia coli MS 124-1] gi|301329182|ref|ZP_07222175.1| ABC transporter, permease protein [Escherichia coli MS 78-1] gi|301643931|ref|ZP_07243958.1| ABC transporter, permease protein [Escherichia coli MS 146-1] gi|306812922|ref|ZP_07447115.1| Glutamate/aspartate transport system permease protein gltK [Escherichia coli NC101] gi|307137270|ref|ZP_07496626.1| Glutamate/aspartate transport system permease protein gltK [Escherichia coli H736] gi|307312631|ref|ZP_07592263.1| polar amino acid ABC transporter, inner membrane subunit [Escherichia coli W] gi|309786313|ref|ZP_07680939.1| amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Shigella dysenteriae 1617] gi|309795479|ref|ZP_07689896.1| ABC transporter, permease protein [Escherichia coli MS 145-7] gi|331641157|ref|ZP_08342292.1| glutamate/aspartate transport system permease protein GltK [Escherichia coli H736] gi|331645810|ref|ZP_08346913.1| glutamate/aspartate transport system permease protein GltK [Escherichia coli M605] gi|331651666|ref|ZP_08352685.1| glutamate/aspartate transport system permease protein GltK [Escherichia coli M718] gi|331656673|ref|ZP_08357635.1| glutamate/aspartate transport system permease protein GltK [Escherichia coli TA206] gi|331667007|ref|ZP_08367881.1| glutamate/aspartate transport system permease protein GltK [Escherichia coli TA271] gi|331672185|ref|ZP_08372977.1| glutamate/aspartate transport system permease protein GltK [Escherichia coli TA280] gi|331676313|ref|ZP_08377025.1| glutamate/aspartate transport system permease protein GltK [Escherichia coli H591] gi|331682070|ref|ZP_08382694.1| glutamate/aspartate transport system permease protein GltK [Escherichia coli H299] gi|84028711|sp|P0AER7|GLTK_ECO57 RecName: Full=Glutamate/aspartate transport system permease protein gltK gi|84028712|sp|P0AER6|GLTK_ECOL6 RecName: Full=Glutamate/aspartate transport system permease protein gltK gi|84028713|sp|P0AER5|GLTK_ECOLI RecName: Full=Glutamate/aspartate transport system permease protein gltK gi|12513560|gb|AAG54987.1|AE005244_5 glutamate/aspartate transport system permease [Escherichia coli O157:H7 str. EDL933] gi|26107026|gb|AAN79210.1|AE016757_114 Glutamate/aspartate transport system permease protein gltK [Escherichia coli CFT073] gi|624631|gb|AAA60981.1| GltK [Escherichia coli] gi|1651272|dbj|BAA35305.1| glutamate and aspartate transporter subunit [Escherichia coli str. K12 substr. W3110] gi|1778571|gb|AAB40854.1| glutamate/aspartate transport system permease protein [Escherichia coli] gi|1786873|gb|AAC73754.1| glutamate and aspartate transporter subunit [Escherichia coli str. K-12 substr. MG1655] gi|13360150|dbj|BAB34115.1| glutamate/aspartate transport system permease [Escherichia coli O157:H7 str. Sakai] gi|73854666|gb|AAZ87373.1| glutamate/aspartate transport system permease [Shigella sonnei Ss046] gi|81240078|gb|ABB60788.1| glutamate/aspartate transport system permease [Shigella dysenteriae Sd197] gi|91071268|gb|ABE06149.1| glutamate/aspartate transport system permease [Escherichia coli UTI89] gi|110342467|gb|ABG68704.1| glutamate/aspartate transport system permease protein GltK [Escherichia coli 536] gi|115511986|gb|ABJ00061.1| glutamate/aspartate transport system permease [Escherichia coli APEC O1] gi|169888067|gb|ACB01774.1| glutamate and aspartate transporter subunit, membrane component of ABC superfamily [Escherichia coli str. K-12 substr. DH10B] gi|169888168|gb|ACB01875.1| glutamate and aspartate transporter subunit, membrane component of ABC superfamily [Escherichia coli str. K-12 substr. DH10B] gi|187767199|gb|EDU31043.1| glutamate/aspartate ABC transporter, permease protein GltK [Escherichia coli O157:H7 str. EC4196] gi|188013883|gb|EDU52005.1| glutamate/aspartate ABC transporter, permease protein GltK [Escherichia coli O157:H7 str. EC4113] gi|189002805|gb|EDU71791.1| glutamate/aspartate ABC transporter, permease protein GltK [Escherichia coli O157:H7 str. EC4076] gi|189354839|gb|EDU73258.1| glutamate/aspartate ABC transporter, permease protein GltK [Escherichia coli O157:H7 str. EC4401] gi|189363542|gb|EDU81961.1| glutamate/aspartate ABC transporter, permease protein GltK [Escherichia coli O157:H7 str. EC4486] gi|189365363|gb|EDU83779.1| glutamate/aspartate ABC transporter, permease protein GltK [Escherichia coli O157:H7 str. EC4501] gi|189373588|gb|EDU92004.1| glutamate/aspartate ABC transporter, permease protein GltK [Escherichia coli O157:H7 str. EC869] gi|189375558|gb|EDU93974.1| glutamate/aspartate ABC transporter, permease protein GltK [Escherichia coli O157:H7 str. EC508] gi|190901268|gb|EDV61037.1| glutamate/aspartate ABC transporter, permease protein GltK [Escherichia coli B7A] gi|190905746|gb|EDV65367.1| glutamate/aspartate ABC transporter, permease protein GltK [Escherichia coli F11] gi|192931043|gb|EDV83647.1| glutamate/aspartate ABC transporter, permease protein GltK [Escherichia coli E22] gi|192957666|gb|EDV88111.1| glutamate/aspartate ABC transporter, permease protein GltK [Escherichia coli E110019] gi|194412221|gb|EDX28527.1| glutamate/aspartate ABC transporter, permease protein GltK [Escherichia coli B171] gi|194421191|gb|EDX37215.1| glutamate/aspartate ABC transporter, permease protein GltK [Escherichia coli 101-1] gi|208729472|gb|EDZ79073.1| glutamate/aspartate ABC transporter, permease protein GltK [Escherichia coli O157:H7 str. EC4206] gi|208731910|gb|EDZ80598.1| glutamate/aspartate ABC transporter, permease protein GltK [Escherichia coli O157:H7 str. EC4045] gi|208737259|gb|EDZ84943.1| glutamate/aspartate ABC transporter, permease protein GltK [Escherichia coli O157:H7 str. EC4042] gi|209159352|gb|ACI36785.1| glutamate/aspartate ABC transporter, permease protein GltK [Escherichia coli O157:H7 str. EC4115] gi|209776928|gb|ACI86776.1| glutamate/aspartate transport system permease [Escherichia coli] gi|209776930|gb|ACI86777.1| glutamate/aspartate transport system permease [Escherichia coli] gi|209776932|gb|ACI86778.1| glutamate/aspartate transport system permease [Escherichia coli] gi|209776934|gb|ACI86779.1| glutamate/aspartate transport system permease [Escherichia coli] gi|209776936|gb|ACI86780.1| glutamate/aspartate transport system permease [Escherichia coli] gi|209911173|dbj|BAG76247.1| glutamate/aspartate ABC transporter permease component [Escherichia coli SE11] gi|215263758|emb|CAS08094.1| glutamate/aspartate transport system permease GltK; membrane component of ABC superfamily [Escherichia coli O127:H6 str. E2348/69] gi|217322061|gb|EEC30485.1| glutamate/aspartate ABC transporter, permease protein GltK [Escherichia coli O157:H7 str. TW14588] gi|218350825|emb|CAU96519.1| glutamate and aspartate transporter subunit ; membrane component of ABC superfamily [Escherichia coli 55989] gi|218359963|emb|CAQ97507.1| glutamate and aspartate transporter subunit ; membrane component of ABC superfamily [Escherichia coli IAI1] gi|218364353|emb|CAR02028.1| glutamate and aspartate transporter subunit ; membrane component of ABC superfamily [Escherichia coli S88] gi|218369004|emb|CAR16758.1| glutamate and aspartate transporter subunit ; membrane component of ABC superfamily [Escherichia coli IAI39] gi|218426033|emb|CAR06850.1| glutamate and aspartate transporter subunit ; membrane component of ABC superfamily [Escherichia coli ED1a] gi|222032406|emb|CAP75145.1| glutamate/aspartate transport system permease protein [Escherichia coli LF82] gi|226898590|gb|EEH84849.1| glutamate/aspartate transport system permease gltK [Escherichia sp. 3_2_53FAA] gi|227838460|gb|EEJ48926.1| glutamate/aspartate ABC superfamily ATP binding cassette transporter, permease protein GltK [Escherichia coli 83972] gi|238861326|gb|ACR63324.1| glutamate and aspartate transporter subunit [Escherichia coli BW2952] gi|242376426|emb|CAQ31128.1| gltK, subunit of GltIJKL glutamate ABC transporter [Escherichia coli BL21(DE3)] gi|253325407|gb|ACT30009.1| polar amino acid ABC transporter, inner membrane subunit [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253972633|gb|ACT38304.1| glutamate and aspartate transporter subunit [Escherichia coli B str. REL606] gi|253976827|gb|ACT42497.1| glutamate and aspartate transporter subunit [Escherichia coli BL21(DE3)] gi|254591217|gb|ACT70578.1| glutamate and aspartate transporter subunit, membrane component of ABC superfamily [Escherichia coli O157:H7 str. TW14359] gi|257752553|dbj|BAI24055.1| glutamate/aspartate transport system permease GltK [Escherichia coli O26:H11 str. 11368] gi|257758026|dbj|BAI29523.1| glutamate/aspartate transport system permease GltK [Escherichia coli O103:H2 str. 12009] gi|257763157|dbj|BAI34652.1| glutamate/aspartate transport system permease GltK [Escherichia coli O111:H- str. 11128] gi|260450180|gb|ACX40602.1| polar amino acid ABC transporter, inner membrane subunit [Escherichia coli DH1] gi|281177801|dbj|BAI54131.1| glutamate/aspartate ABC transporter permease component [Escherichia coli SE15] gi|284920453|emb|CBG33514.1| glutamate/aspartate ABC transporter, permease protein [Escherichia coli 042] gi|290761476|gb|ADD55437.1| Glutamate/aspartate transport system permease protein gltK [Escherichia coli O55:H7 str. CB9615] gi|291325293|gb|EFE64708.1| glutamate/aspartate transport system permease gltK [Escherichia coli B088] gi|291434007|gb|EFF06980.1| glutamate/aspartate transport system permease gltK [Escherichia coli B185] gi|294491939|gb|ADE90695.1| glutamate/aspartate ABC transporter, permease protein GltK [Escherichia coli IHE3034] gi|299878152|gb|EFI86363.1| ABC transporter, permease protein [Escherichia coli MS 196-1] gi|300298395|gb|EFJ54780.1| ABC transporter, permease protein [Escherichia coli MS 185-1] gi|300304462|gb|EFJ58982.1| ABC transporter, permease protein [Escherichia coli MS 200-1] gi|300314172|gb|EFJ63956.1| ABC transporter, permease protein [Escherichia coli MS 175-1] gi|300396149|gb|EFJ79687.1| ABC transporter, permease protein [Escherichia coli MS 69-1] gi|300400463|gb|EFJ84001.1| ABC transporter, permease protein [Escherichia coli MS 84-1] gi|300407263|gb|EFJ90801.1| ABC transporter, permease protein [Escherichia coli MS 45-1] gi|300416792|gb|EFK00103.1| ABC transporter, permease protein [Escherichia coli MS 182-1] gi|300449582|gb|EFK13202.1| ABC transporter, permease protein [Escherichia coli MS 116-1] gi|300457105|gb|EFK20598.1| ABC transporter, permease protein [Escherichia coli MS 21-1] gi|300460612|gb|EFK24105.1| ABC transporter, permease protein [Escherichia coli MS 187-1] gi|300524379|gb|EFK45448.1| ABC transporter, permease protein [Escherichia coli MS 119-7] gi|300529524|gb|EFK50586.1| ABC transporter, permease protein [Escherichia coli MS 107-1] gi|300842687|gb|EFK70447.1| ABC transporter, permease protein [Escherichia coli MS 124-1] gi|300844487|gb|EFK72247.1| ABC transporter, permease protein [Escherichia coli MS 78-1] gi|301077701|gb|EFK92507.1| ABC transporter, permease protein [Escherichia coli MS 146-1] gi|305853685|gb|EFM54124.1| Glutamate/aspartate transport system permease protein gltK [Escherichia coli NC101] gi|306907333|gb|EFN37838.1| polar amino acid ABC transporter, inner membrane subunit [Escherichia coli W] gi|307552516|gb|ADN45291.1| glutamate/aspartate transport system permease protein [Escherichia coli ABU 83972] gi|307627916|gb|ADN72220.1| Glutamate/aspartate transport system permease protein gltK [Escherichia coli UM146] gi|308120854|gb|EFO58116.1| ABC transporter, permease protein [Escherichia coli MS 145-7] gi|308925707|gb|EFP71188.1| amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Shigella dysenteriae 1617] gi|309700892|emb|CBJ00189.1| glutamate/aspartate ABC transporter, permease protein [Escherichia coli ETEC H10407] gi|312945193|gb|ADR26020.1| glutamate/aspartate transport system permease GltK [Escherichia coli O83:H1 str. NRG 857C] gi|315059908|gb|ADT74235.1| glutamate and aspartate transporter subunit [Escherichia coli W] gi|315135319|dbj|BAJ42478.1| glutamate/aspartate transport system permease protein gltK [Escherichia coli DH1] gi|315255041|gb|EFU35009.1| ABC transporter, permease protein [Escherichia coli MS 85-1] gi|315287082|gb|EFU46496.1| ABC transporter, permease protein [Escherichia coli MS 110-3] gi|315299180|gb|EFU58434.1| ABC transporter, permease protein [Escherichia coli MS 16-3] gi|315616425|gb|EFU97042.1| amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Escherichia coli 3431] gi|320193059|gb|EFW67699.1| Glutamate Aspartate transport system permease protein GltK [Escherichia coli O157:H7 str. EC1212] gi|320194172|gb|EFW68804.1| Glutamate Aspartate transport system permease protein GltK [Escherichia coli WV_060327] gi|320198222|gb|EFW72826.1| Glutamate Aspartate transport system permease protein GltK [Escherichia coli EC4100B] gi|320638104|gb|EFX07868.1| glutamate/aspartate transport system permease GltK [Escherichia coli O157:H7 str. G5101] gi|320643508|gb|EFX12678.1| glutamate/aspartate transport system permease GltK [Escherichia coli O157:H- str. 493-89] gi|320648843|gb|EFX17470.1| glutamate/aspartate transport system permease GltK [Escherichia coli O157:H- str. H 2687] gi|320654427|gb|EFX22474.1| glutamate/aspartate transport system permease GltK [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320660109|gb|EFX27639.1| glutamate/aspartate transport system permease GltK [Escherichia coli O55:H7 str. USDA 5905] gi|320664907|gb|EFX32042.1| glutamate/aspartate transport system permease GltK [Escherichia coli O157:H7 str. LSU-61] gi|323153622|gb|EFZ39870.1| amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Escherichia coli EPECa14] gi|323158893|gb|EFZ44904.1| amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Escherichia coli E128010] gi|323163914|gb|EFZ49723.1| amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Shigella sonnei 53G] gi|323170777|gb|EFZ56427.1| amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Escherichia coli LT-68] gi|323179870|gb|EFZ65427.1| amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Escherichia coli 1180] gi|323184992|gb|EFZ70359.1| amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Escherichia coli 1357] gi|323191285|gb|EFZ76549.1| amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Escherichia coli RN587/1] gi|323379528|gb|ADX51796.1| polar amino acid ABC transporter, inner membrane subunit [Escherichia coli KO11] gi|323938415|gb|EGB34669.1| inner membrane transport system [Escherichia coli E1520] gi|323943068|gb|EGB39227.1| inner membrane transport system [Escherichia coli E482] gi|323945128|gb|EGB41190.1| inner membrane transport system [Escherichia coli H120] gi|323952776|gb|EGB48644.1| inner membrane transport system [Escherichia coli H252] gi|323958405|gb|EGB54111.1| inner membrane transport system [Escherichia coli H263] gi|323963221|gb|EGB58789.1| inner membrane transport system [Escherichia coli H489] gi|323972108|gb|EGB67322.1| inner membrane transport system [Escherichia coli TA007] gi|324006308|gb|EGB75527.1| ABC transporter, permease protein [Escherichia coli MS 57-2] gi|324010470|gb|EGB79689.1| ABC transporter, permease protein [Escherichia coli MS 60-1] gi|324016084|gb|EGB85303.1| ABC transporter, permease protein [Escherichia coli MS 117-3] gi|324116727|gb|EGC10642.1| inner membrane transport system [Escherichia coli E1167] gi|326341403|gb|EGD65195.1| Glutamate Aspartate transport system permease protein GltK [Escherichia coli O157:H7 str. 1044] gi|326345817|gb|EGD69556.1| Glutamate Aspartate transport system permease protein GltK [Escherichia coli O157:H7 str. 1125] gi|331037955|gb|EGI10175.1| glutamate/aspartate transport system permease protein GltK [Escherichia coli H736] gi|331044562|gb|EGI16689.1| glutamate/aspartate transport system permease protein GltK [Escherichia coli M605] gi|331049944|gb|EGI22002.1| glutamate/aspartate transport system permease protein GltK [Escherichia coli M718] gi|331054921|gb|EGI26930.1| glutamate/aspartate transport system permease protein GltK [Escherichia coli TA206] gi|331066231|gb|EGI38115.1| glutamate/aspartate transport system permease protein GltK [Escherichia coli TA271] gi|331070652|gb|EGI42015.1| glutamate/aspartate transport system permease protein GltK [Escherichia coli TA280] gi|331076371|gb|EGI47653.1| glutamate/aspartate transport system permease protein GltK [Escherichia coli H591] gi|331080749|gb|EGI51923.1| glutamate/aspartate transport system permease protein GltK [Escherichia coli H299] gi|332104146|gb|EGJ07492.1| glutamate and aspartate transporter subunit [Shigella sp. D9] Length = 224 Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 45/129 (34%), Positives = 81/129 (62%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 +S +A S + AA+ +EI+R+G+ ++ RGQ AA+ALG+TH ++ +L++LPQA R+++ Sbjct: 96 RLISAMVAFSMFEAAYYSEIIRAGIQSISRGQSSAALALGMTHWQSMKLIILPQAFRAMV 155 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 P L +Q + L +++SL + AD TI + G +E+IL F+Y +S+ +L Sbjct: 156 PLLLTQGIVLFQDTSLVYVLSLADFFRTASTIGERDGTQVEMILFAGFVYFVISLSASLL 215 Query: 385 MNRLNAKIA 393 ++ L + A Sbjct: 216 VSYLKRRTA 224 Score = 41.2 bits (95), Expect = 0.27, Method: Compositional matrix adjust. Identities = 29/92 (31%), Positives = 49/92 (53%), Gaps = 10/92 (10%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G V T + + ++ + GT++ RLS+ VAW + YV VFR+IP ++V+ + Sbjct: 16 LLDGLVITLKITVTAVVIGILWGTMLAVMRLSSFAPVAWFAKAYVNVFRSIPLVMVLLWF 75 Query: 149 Y-------KSVLSVLPIPD---HSIVLPFGMF 170 Y ++VL + P D S ++ F MF Sbjct: 76 YLIVPGFLQNVLGLSPKNDIRLISAMVAFSMF 107 >gi|313890948|ref|ZP_07824570.1| ABC transporter, permease protein [Streptococcus pseudoporcinus SPIN 20026] gi|313120672|gb|EFR43789.1| ABC transporter, permease protein [Streptococcus pseudoporcinus SPIN 20026] Length = 724 Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 54/178 (30%), Positives = 97/178 (54%), Gaps = 21/178 (11%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP--EFMSLYIALS 274 + +PL+ ++ F+ +G+P L+ +Q SP +F++ IALS Sbjct: 565 RGIPLMIVAAFIFWGIPNLIESMTGHQ-------------------SPINDFLAATIALS 605 Query: 275 CYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNL 334 A+IAEIVR G+ A+P GQMEA+ +LG+ ++ R V+LPQA++ ++P +Q++ Sbjct: 606 LNGGAYIAEIVRGGIEAIPAGQMEASRSLGIPYKLTMRKVILPQAVKVMLPNFINQFVIS 665 Query: 335 LKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 LK++++ A+G +L G II + Q+ + I IYL + ++ RL ++ Sbjct: 666 LKDTTIVSAIGLVELFQTGKIIIARNYQSFRMYAILAIIYLIMITLLTRLAKRLEKRL 723 >gi|312965093|ref|ZP_07779330.1| amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Escherichia coli 2362-75] gi|312290184|gb|EFR18067.1| amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Escherichia coli 2362-75] Length = 224 Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 45/129 (34%), Positives = 81/129 (62%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 +S +A S + AA+ +EI+R+G+ ++ RGQ AA+ALG+TH ++ +L++LPQA R+++ Sbjct: 96 RLISAMVAFSMFEAAYYSEIIRAGIQSISRGQSSAALALGMTHWQSMKLIILPQAFRAMV 155 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 P L +Q + L +++SL + AD TI + G +E+IL F+Y +S+ +L Sbjct: 156 PLLLTQGIVLFQDTSLVYVLSLADFFRTASTIGERDGTQVEMILFAGFVYFVISLSASLL 215 Query: 385 MNRLNAKIA 393 ++ L + A Sbjct: 216 VSYLKRRTA 224 Score = 41.2 bits (95), Expect = 0.32, Method: Compositional matrix adjust. Identities = 29/92 (31%), Positives = 49/92 (53%), Gaps = 10/92 (10%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G V T + + ++ + GT++ RLS+ VAW + YV VFR+IP ++V+ + Sbjct: 16 LLNGLVITLKITVTAVVIGILWGTMLAVMRLSSFAPVAWFAKAYVNVFRSIPLVMVLLWF 75 Query: 149 Y-------KSVLSVLPIPD---HSIVLPFGMF 170 Y ++VL + P D S ++ F MF Sbjct: 76 YLIVPGFLQNVLGLSPKNDIRLISAMVAFSMF 107 >gi|82543096|ref|YP_407043.1| glutamate-aspartate transport system permease [Shigella boydii Sb227] gi|81244507|gb|ABB65215.1| glutamate-aspartate transport system permease [Shigella boydii Sb227] gi|320185368|gb|EFW60138.1| Glutamate Aspartate transport system permease protein GltK [Shigella flexneri CDC 796-83] gi|332097727|gb|EGJ02701.1| amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Shigella boydii 3594-74] Length = 224 Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 45/129 (34%), Positives = 81/129 (62%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 +S +A S + AA+ +EI+R+G+ ++ RGQ AA+ALG+TH ++ +L++LPQA R+++ Sbjct: 96 RLISAMVAFSMFEAAYYSEIIRAGIQSISRGQSSAALALGMTHWQSMKLIILPQAFRAMV 155 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 P L +Q + L +++SL + AD TI + G +E+IL F+Y +S+ +L Sbjct: 156 PLLLTQGIVLFQDTSLVYVLSLADFFRTASTIGERDGTQVEMILFAGFVYFVISLSASLL 215 Query: 385 MNRLNAKIA 393 ++ L + A Sbjct: 216 VSYLKRRTA 224 Score = 40.8 bits (94), Expect = 0.39, Method: Compositional matrix adjust. Identities = 28/92 (30%), Positives = 49/92 (53%), Gaps = 10/92 (10%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G V T + + ++ + GT++ RLS+ VAW + YV +FR+IP ++V+ + Sbjct: 16 LLDGLVITLKITVTAVVIGILWGTMLAVMRLSSFAPVAWFAKAYVNIFRSIPLVMVLLWF 75 Query: 149 Y-------KSVLSVLPIPD---HSIVLPFGMF 170 Y ++VL + P D S ++ F MF Sbjct: 76 YLIVPGFLQNVLGLSPKNDIRLISAMVAFSMF 107 >gi|239982244|ref|ZP_04704768.1| permease [Streptomyces albus J1074] Length = 315 Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 76/244 (31%), Positives = 123/244 (50%), Gaps = 20/244 (8%) Query: 158 IPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGK 217 IPD+ F N+R LS T+ V V G++L++ RLS++ Sbjct: 63 IPDY--------FFNDRILSGVRETLILTVLSMVIGVVGGVLLAVM--RLSKN---PVVS 109 Query: 218 ALPLLYISTFLIFGLPTLVLIALKYQLHF--DKPVLGQFNFIGGSTVSPEFMSLYIALSC 275 ++ YI F G P LV + + + L F + LG F S F++ + L Sbjct: 110 SIAWFYIWFFR--GTPVLVQLFVWFNLGFVFEYMNLGPFYKDEWSDFMTPFLTALLGLGL 167 Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335 AA++AEI R+GL++V GQ EAA ALG++ K R ++LPQAMR I+PP ++ +N+L Sbjct: 168 NEAAYMAEICRAGLLSVDEGQTEAAHALGMSQGKTLRRIVLPQAMRVIVPPTGNEVINML 227 Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI---WMFIYLSLSIMIALFMNRLNAKI 392 K +SL AV + +L I +G +E + + W I S+ + ++ R A+ Sbjct: 228 KTTSLVAAVQYYELFKHAQDIGMTSGATVEALFLAATWYLILTSILSIGQYYIERYYARG 287 Query: 393 ALKE 396 +L++ Sbjct: 288 SLRQ 291 >gi|116619007|ref|YP_819378.1| ABC-type amino acid transport system, permease component [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] gi|116097854|gb|ABJ63005.1| amino acid ABC transporter membrane protein 1, PAAT family [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] Length = 213 Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 49/122 (40%), Positives = 76/122 (62%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IALS YT+AFIAE VR+G+++V GQME A A GL+ ++ R ++LPQA + +P L +Q Sbjct: 88 IALSLYTSAFIAETVRAGILSVDNGQMEGARANGLSFNQSMRYIVLPQAFKIALPSLGNQ 147 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++NL+KNSS+ VG DL+ G + T +I YL +++ ++ +M L Sbjct: 148 FINLVKNSSILAFVGGLDLMYQGNMVAATTFDTFSTYIIVALFYLVITLPLSYYMQNLER 207 Query: 391 KI 392 K+ Sbjct: 208 KL 209 Score = 42.0 bits (97), Expect = 0.19, Method: Compositional matrix adjust. Identities = 25/69 (36%), Positives = 37/69 (53%) Query: 90 LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 L GF T + +I + I+GT ++ K I VYV+VFRNIP L++ FF + Sbjct: 12 LQGFGYTLLSSIIALIISMILGTFFAILQILPQKWAQKIGNVYVQVFRNIPLLIITFFFF 71 Query: 150 KSVLSVLPI 158 V V+P+ Sbjct: 72 LVVAKVIPM 80 >gi|167461573|ref|ZP_02326662.1| glutamine ABC transporter (permease) [Paenibacillus larvae subsp. larvae BRL-230010] gi|322381528|ref|ZP_08055507.1| glutamine ABC transporter-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321154535|gb|EFX46832.1| glutamine ABC transporter-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 217 Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 49/122 (40%), Positives = 83/122 (68%), Gaps = 4/122 (3%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I L+ YT+AFIAE +R+G++AVP+GQ+EA + GLT+ + + ++L QA++ +IPPL +Q Sbjct: 92 IGLAIYTSAFIAEAIRAGILAVPKGQVEAGRSSGLTYLQTMQYIVLLQAIKIVIPPLGNQ 151 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQT----GQAIEIILIWMFIYLSLSIMIALFMN 386 +LNL+KNSS+ V DL+ G I ++T G I + + ++ + + LS++I++ Sbjct: 152 FLNLIKNSSVLGVVAGLDLMYFGDLINSETFKVFGTYIFVAMFYLLLTIPLSLIISILER 211 Query: 387 RL 388 RL Sbjct: 212 RL 213 Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust. Identities = 20/58 (34%), Positives = 32/58 (55%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 GF NT + + + ++G + R+S +L+ I YVE FRNIP L+++ F Y Sbjct: 17 GFGNTVKASLLALAGSFVLGVIFAVMRISTFRLLRIIGTAYVEFFRNIPLLLIVMFFY 74 >gi|309791170|ref|ZP_07685702.1| polar amino acid ABC transporter, inner membrane subunit [Oscillochloris trichoides DG6] gi|308226732|gb|EFO80428.1| polar amino acid ABC transporter, inner membrane subunit [Oscillochloris trichoides DG6] Length = 393 Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 71/218 (32%), Positives = 116/218 (53%), Gaps = 18/218 (8%) Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240 LTM ++ + SF LG++L+L R + K + YI LI G+P L+ + Sbjct: 185 LTMILSSSGIILSFPLGVLLAL-----GRRSNLPIIKGFCVAYIE--LIRGVP---LVTV 234 Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300 + P+ F+ + +A++ ++AA++AE VR GL ++PRGQ EAA Sbjct: 235 LFMAQLMLPL-----FLPDQVRIDSVLRAMVAVTLFSAAYLAENVRGGLQSLPRGQTEAA 289 Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 ALGL + T L+ LPQA+R++IP L Q+++L K++SL V VG DL+ + TI +Q Sbjct: 290 RALGLNPVQTTLLITLPQALRAVIPVLVGQFISLFKDTSLVVIVGLIDLLGIARTIYSQA 349 Query: 361 GQAIEIILIWMFIYLSLSIMIALF---MNRLNAKIALK 395 +W L ++++ +F M+R + KI K Sbjct: 350 EWKDFTGGVWRETLLVVALIYWIFSFTMSRTSKKIEEK 387 >gi|311895158|dbj|BAJ27566.1| putative glutamate ABC transporter permease protein [Kitasatospora setae KM-6054] Length = 214 Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 54/134 (40%), Positives = 80/134 (59%), Gaps = 2/134 (1%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P F +AL CYT+AF+ E +RSG+ VP GQ EAA +LGLT + RLV+LPQA RS+ Sbjct: 82 PFFTFAVLALGCYTSAFVCETLRSGVNTVPTGQGEAARSLGLTFGQTLRLVVLPQAYRSV 141 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI-YLSLSIMIA 382 + PL S + L KN+++A + +L+ T IN+ G I +W+ YL L++ I+ Sbjct: 142 VAPLGSVMIALAKNTAIAGSFSVVELLGTYRT-INELGYDIVWTFVWIAAGYLVLTLAIS 200 Query: 383 LFMNRLNAKIALKE 396 N L ++A+ Sbjct: 201 ALFNLLERRVAVSR 214 Score = 37.0 bits (84), Expect = 5.7, Method: Compositional matrix adjust. Identities = 27/79 (34%), Positives = 39/79 (49%), Gaps = 6/79 (7%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151 GF+ T WL + A ++G +V R+S K + +V V RN PL ++FF+ Sbjct: 14 GFLGTLWLTLVSAVLALVLGAVVAGFRVSPVKPLRVFGTGWVTVLRNT-PLTLLFFIV-- 70 Query: 152 VLSVLPIPDHSIVLPFGMF 170 VL +P I LPF F Sbjct: 71 ---VLGLPRFDITLPFFTF 86 >gi|197284336|ref|YP_002150208.1| glutamate/aspartate ABC transporter permease [Proteus mirabilis HI4320] gi|194681823|emb|CAR41084.1| glutamate/aspartate ABC transporter, permease protein [Proteus mirabilis HI4320] Length = 246 Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 49/129 (37%), Positives = 80/129 (62%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+S + L +TAA + E VR+ + ++PRGQ A +ALGLT + R VLLP A R IIP Sbjct: 111 FVSSALCLGLFTAARMCEQVRAAINSLPRGQKAAGLALGLTLPQTYRYVLLPNAYRVIIP 170 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 P+TS+ LNL+KNS++A +G D+ + +++ + +A E Y+ ++++I L M Sbjct: 171 PMTSEMLNLVKNSAIASTIGLIDMAAQANKLLDYSAKAYESFTAITLAYVFINVIIMLIM 230 Query: 386 NRLNAKIAL 394 + L ++ L Sbjct: 231 HWLEKRVRL 239 Score = 43.1 bits (100), Expect = 0.072, Method: Compositional matrix adjust. Identities = 29/91 (31%), Positives = 49/91 (53%), Gaps = 5/91 (5%) Query: 71 EIDQGI----VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVA 126 + D GI P+ +++Y ++ GF T L+ I A I+G+ G R N+L++ Sbjct: 4 DWDWGIFFQEAPF-GNTTYLGWLISGFQVTVALSLCAWIIAFIVGSFFGILRTVPNRLLS 62 Query: 127 WICRVYVEVFRNIPPLVVIFFLYKSVLSVLP 157 + +YVE+FRN+P +V F Y + +LP Sbjct: 63 SLGAIYVELFRNVPLIVQFFTWYLVIPELLP 93 >gi|73541283|ref|YP_295803.1| amino acid ABC transporter permease [Ralstonia eutropha JMP134] gi|72118696|gb|AAZ60959.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Ralstonia eutropha JMP134] Length = 222 Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 47/131 (35%), Positives = 83/131 (63%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P F+ I L Y+ A+++EIVR + +V +GQMEAA ++G++ +A R V+LPQA+ + Sbjct: 87 PAFVCGVIGLGVYSGAYVSEIVRGAIQSVEKGQMEAARSIGMSSGQAMRAVILPQAIVRM 146 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 IPPL ++++ L+KNS+L + ADL+ G II+ + +++E+ L +YL L+ L Sbjct: 147 IPPLGNEFIALIKNSALVSLLTIADLMHEGQKIISVSYRSLEVYLAIALVYLILTSAAGL 206 Query: 384 FMNRLNAKIAL 394 + R ++ + Sbjct: 207 ILRRAEQRLRM 217 >gi|83748398|ref|ZP_00945421.1| Amino acid ABC transporter permease protein [Ralstonia solanacearum UW551] gi|207738968|ref|YP_002257361.1| amino acid transmembrane protein [Ralstonia solanacearum IPO1609] gi|83724914|gb|EAP72069.1| Amino acid ABC transporter permease protein [Ralstonia solanacearum UW551] gi|206592339|emb|CAQ59245.1| amino acid transmembrane protein [Ralstonia solanacearum IPO1609] Length = 262 Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 48/134 (35%), Positives = 84/134 (62%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 +F S +AL+ A+ AE +R+GL+AVP+GQ+EAA +LGL+ V+ PQA + + Sbjct: 128 DFTSACVALAFNAGAYNAESIRAGLLAVPKGQLEAAHSLGLSRWHTFADVIFPQAFKVAL 187 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 PPL + ++ LLK+SSLA A+G +L +VG + T Q + ++ IYL+L+ ++ F Sbjct: 188 PPLVNNFIALLKDSSLAYAIGVVELTNVGNRLQAATFQPLPALVTTAVIYLTLTTVLTQF 247 Query: 385 MNRLNAKIALKEKK 398 N + ++ ++ ++ Sbjct: 248 SNAVEQRMDVEGRQ 261 >gi|199599084|ref|ZP_03212490.1| ABC-type amino acid transport system, permease component [Lactobacillus rhamnosus HN001] gi|229553194|ref|ZP_04441919.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus rhamnosus LMS2-1] gi|258509002|ref|YP_003171753.1| amino acid ABC transporter permease [Lactobacillus rhamnosus GG] gi|258540196|ref|YP_003174695.1| amino acid ABC transporter permease [Lactobacillus rhamnosus Lc 705] gi|199590047|gb|EDY98147.1| ABC-type amino acid transport system, permease component [Lactobacillus rhamnosus HN001] gi|229313490|gb|EEN79463.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus rhamnosus LMS2-1] gi|257148929|emb|CAR87902.1| ABC transporter, amino acid transporter permease protein [Lactobacillus rhamnosus GG] gi|257151872|emb|CAR90844.1| ABC transporter, amino acid transporter permease protein [Lactobacillus rhamnosus Lc 705] gi|259650295|dbj|BAI42457.1| amino acid ABC transporter permease component [Lactobacillus rhamnosus GG] Length = 214 Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 54/122 (44%), Positives = 76/122 (62%), Gaps = 2/122 (1%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I L YT+AFIAE VR+G+ AVP GQME A ++G+T+ +A ++ PQA + +IPPL +Q Sbjct: 90 IGLLIYTSAFIAETVRAGIEAVPSGQMEGARSIGMTYTQAMTQIIFPQAFKIVIPPLGNQ 149 Query: 331 YLNLLKNSS-LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 ++NL+KNSS LA GF DL+ G I T + LI YL L++ ++ M L Sbjct: 150 FINLVKNSSVLAFVAGF-DLMYQGKLIAATTFSTFDTYLIVGIFYLILTMPLSYLMRYLE 208 Query: 390 AK 391 K Sbjct: 209 KK 210 >gi|91225414|ref|ZP_01260536.1| amino acid ABC transporter, permease protein [Vibrio alginolyticus 12G01] gi|269966668|ref|ZP_06180747.1| polar amino acid ABC transporter, permease protein [Vibrio alginolyticus 40B] gi|91189777|gb|EAS76050.1| amino acid ABC transporter, permease protein [Vibrio alginolyticus 12G01] gi|269828735|gb|EEZ82990.1| polar amino acid ABC transporter, permease protein [Vibrio alginolyticus 40B] Length = 265 Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 73/241 (30%), Positives = 121/241 (50%), Gaps = 19/241 (7%) Query: 158 IPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGK 217 +PD+ G + + +T++ +A F+ VLG+V +L RLS K G Sbjct: 43 VPDYIAFYEDGEWWPAELIDGLLVTLNISAISLFFTLVLGLVTALL--RLS---DSKVGN 97 Query: 218 ALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT 277 + Y+ +I P LV I L Y + PV+G F + +ALS + Sbjct: 98 VIGTTYVE--VIRNTPLLVQIYLLYFVF--GPVIGL----------DRFSTAVLALSLFQ 143 Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 A+ AEI R+GL ++P+GQ EAA LGL+ + V+LPQ ++ +PPLT++ ++L+KN Sbjct: 144 GAYTAEIFRAGLNSIPKGQFEAAQTLGLSPFYTYKDVILPQVLQRTLPPLTNEVVSLIKN 203 Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 SS+ + DL + I+++T EI IYL+L++ ++ L K+ + Sbjct: 204 SSIVSVMAIFDLTTQARNIVSETAMPFEIWFTVAAIYLALTLSLSGLSAWLEHKLGASWR 263 Query: 398 K 398 K Sbjct: 264 K 264 >gi|319639192|ref|ZP_07993943.1| amino acid ABC transporter [Neisseria mucosa C102] gi|317399376|gb|EFV80046.1| amino acid ABC transporter [Neisseria mucosa C102] Length = 248 Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 49/121 (40%), Positives = 77/121 (63%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +AL + A+I EI R+G+ ++ +GQMEAA +LGLT+ +A R V+LPQA+R ++PPL S+ Sbjct: 122 LALVANSGAYICEIFRAGIQSIDKGQMEAARSLGLTYTQAMRYVILPQALRRMLPPLASE 181 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++ LLK+SSL +G A+L V TI + E + IYL L+ ++ RL + Sbjct: 182 FITLLKDSSLLSVIGVAELAYVQSTITGRYSVYEEPLYTIALIYLVLTSVLGWVFLRLES 241 Query: 391 K 391 + Sbjct: 242 R 242 >gi|83746635|ref|ZP_00943685.1| GltJ [Ralstonia solanacearum UW551] gi|207727925|ref|YP_002256319.1| glutamate/aspartate transmembrane protein [Ralstonia solanacearum MolK2] gi|207742330|ref|YP_002258722.1| glutamate/aspartate transmembrane protein [Ralstonia solanacearum IPO1609] gi|83726769|gb|EAP73897.1| GltJ [Ralstonia solanacearum UW551] gi|206591167|emb|CAQ56779.1| glutamate/aspartate transmembrane protein [Ralstonia solanacearum MolK2] gi|206593720|emb|CAQ60647.1| glutamate/aspartate transmembrane protein [Ralstonia solanacearum IPO1609] Length = 242 Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 46/129 (35%), Positives = 78/129 (60%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+ + L +TAA + E VRSG+ ++PRGQ A +A+G T + R V+LP A R I+P Sbjct: 107 FLCAMLCLGTFTAARVCEQVRSGINSLPRGQRNAGLAMGFTLAQTYRHVMLPMAFRIIVP 166 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PLTS++LN+ KNS++A +G +L + G +++ T Q E + +Y+ +++ + M Sbjct: 167 PLTSEFLNIFKNSAVASTIGLLELAAQGRQLVDYTAQPYESFIAVTLMYMLINLTVMGIM 226 Query: 386 NRLNAKIAL 394 + A+ L Sbjct: 227 RWVEARTRL 235 Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust. Identities = 26/81 (32%), Positives = 45/81 (55%) Query: 81 SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140 + +Y +L G T L S I A ++G+++G R NK+++ + YVE+FRNIP Sbjct: 16 QNQTYLDWLLSGLKTTIALGLSSWIIALVLGSVLGVLRTVPNKVLSGLATAYVELFRNIP 75 Query: 141 PLVVIFFLYKSVLSVLPIPDH 161 +V +F Y + ++P D+ Sbjct: 76 LIVQLFIWYFVMPELVPGGDY 96 >gi|323967600|gb|EGB63016.1| inner membrane transport system [Escherichia coli M863] gi|323976364|gb|EGB71454.1| inner membrane transport system [Escherichia coli TW10509] gi|325498168|gb|EGC96027.1| glutamate/aspartate transport system permease [Escherichia fergusonii ECD227] gi|327254338|gb|EGE65960.1| amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Escherichia coli STEC_7v] Length = 224 Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 45/129 (34%), Positives = 81/129 (62%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 +S +A S + AA+ +EI+R+G+ ++ RGQ AA+ALG+TH ++ +L++LPQA R+++ Sbjct: 96 RLISAMVAFSMFEAAYYSEIIRAGIQSISRGQSSAALALGMTHWQSMKLIILPQAFRAMV 155 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 P L +Q + L +++SL + AD TI + G +E+IL F+Y +S+ +L Sbjct: 156 PLLLTQGIVLFQDTSLVYVLSLADFFRTASTIGERDGTQVEMILFAGFVYFVISLSASLL 215 Query: 385 MNRLNAKIA 393 ++ L + A Sbjct: 216 VSYLKRRTA 224 Score = 41.2 bits (95), Expect = 0.32, Method: Compositional matrix adjust. Identities = 28/92 (30%), Positives = 49/92 (53%), Gaps = 10/92 (10%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G V T + + ++ + GT++ RLS+ +AW + YV VFR+IP ++V+ + Sbjct: 16 LLDGLVITLKITITAVVIGILWGTMLAVMRLSSFAPIAWFAKAYVNVFRSIPLVMVLLWF 75 Query: 149 Y-------KSVLSVLPIPD---HSIVLPFGMF 170 Y ++VL + P D S ++ F MF Sbjct: 76 YLIVPGFLQNVLGLSPKNDIRLISAMVAFSMF 107 >gi|307706135|ref|ZP_07642954.1| binding-protein-dependent transport system inner membrane component family protein [Streptococcus mitis SK321] gi|307618535|gb|EFN97683.1| binding-protein-dependent transport system inner membrane component family protein [Streptococcus mitis SK321] Length = 225 Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 75/238 (31%), Positives = 114/238 (47%), Gaps = 43/238 (18%) Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFAT----------RLSRHFHEKTG 216 FG F N G F TL + + F+ + VLGI +T R+ F++ T Sbjct: 14 FGQFFN--GFLF-TLALAIGS--FILAMVLGIFFGAMSTSKRPILRILARIFVEFYQNT- 67 Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 PLL + +GLP + D ++ P + + + + Y Sbjct: 68 ---PLLVQFVIVFYGLPLIS----------DHTIM-----------IPIYWTAVLCVGLY 103 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 A+IAE++RSG+ ++P GQMEAA++ G T+ A RL++LPQA R I+PPLT+Q +NL+K Sbjct: 104 HGAYIAEVIRSGIQSIPSGQMEAALSQGFTYISAMRLIILPQAFRIILPPLTNQIVNLIK 163 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF---MNRLNAK 391 N+S + DL+ V + G I L +Y SL +A F M + N K Sbjct: 164 NTSTVAIISGVDLMFVTKSWSALNGNYIPAFLGAALLYFSLCFPVAQFGRKMEQANKK 221 Score = 38.1 bits (87), Expect = 2.7, Method: Compositional matrix adjust. Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 5/76 (6%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151 GF+ T LA I A ++G GA S ++ + R++VE ++N P LV ++ Sbjct: 20 GFLFTLALAIGSFILAMVLGIFFGAMSTSKRPILRILARIFVEFYQNTPLLVQFVIVFYG 79 Query: 152 VLSVLP-IPDHSIVLP 166 LP I DH+I++P Sbjct: 80 ----LPLISDHTIMIP 91 >gi|218703987|ref|YP_002411506.1| glutamate and aspartate ABC transporter membrane protein [Escherichia coli UMN026] gi|293403915|ref|ZP_06647909.1| glutamate Aspartate transport system permease gltK [Escherichia coli FVEC1412] gi|298379690|ref|ZP_06989295.1| glutamate Aspartate transport system permease gltK [Escherichia coli FVEC1302] gi|300901164|ref|ZP_07119269.1| ABC transporter, permease protein [Escherichia coli MS 198-1] gi|331662019|ref|ZP_08362942.1| glutamate/aspartate transport system permease protein GltK [Escherichia coli TA143] gi|218431084|emb|CAR11960.1| glutamate and aspartate transporter subunit ; membrane component of ABC superfamily [Escherichia coli UMN026] gi|291428501|gb|EFF01526.1| glutamate Aspartate transport system permease gltK [Escherichia coli FVEC1412] gi|298279388|gb|EFI20896.1| glutamate Aspartate transport system permease gltK [Escherichia coli FVEC1302] gi|300355403|gb|EFJ71273.1| ABC transporter, permease protein [Escherichia coli MS 198-1] gi|331060441|gb|EGI32405.1| glutamate/aspartate transport system permease protein GltK [Escherichia coli TA143] Length = 224 Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 45/129 (34%), Positives = 81/129 (62%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 +S +A S + AA+ +EI+R+G+ ++ RGQ AA+ALG+TH ++ +L++LPQA R+++ Sbjct: 96 RLISAMVAFSMFEAAYYSEIIRAGIQSISRGQSSAALALGMTHWQSMKLIILPQAFRAMV 155 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 P L +Q + L +++SL + AD TI + G +E+IL F+Y +S+ +L Sbjct: 156 PLLLTQGIVLFQDTSLVYVLSLADFFRTASTIGERDGTQVEMILFAGFVYFVISLSASLL 215 Query: 385 MNRLNAKIA 393 ++ L + A Sbjct: 216 VSYLKRRTA 224 Score = 42.0 bits (97), Expect = 0.17, Method: Compositional matrix adjust. Identities = 29/92 (31%), Positives = 49/92 (53%), Gaps = 10/92 (10%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G V T + + ++ + GT++ RLS+ VAW + YV VFR+IP ++V+ + Sbjct: 16 LLDGLVITLKITITAVVIGILWGTMLAVMRLSSFAPVAWFAKAYVNVFRSIPLVMVLLWF 75 Query: 149 Y-------KSVLSVLPIPD---HSIVLPFGMF 170 Y ++VL + P D S ++ F MF Sbjct: 76 YLIVPGFLQNVLGLSPKTDIRLISAMVAFSMF 107 >gi|47568094|ref|ZP_00238799.1| amino acid ABC transporter, permease protein [Bacillus cereus G9241] gi|47555248|gb|EAL13594.1| amino acid ABC transporter, permease protein [Bacillus cereus G9241] Length = 214 Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 62/185 (33%), Positives = 100/185 (54%), Gaps = 30/185 (16%) Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPT 234 +T++ V SF++G V+ + F + G + LPLL I F F LP Sbjct: 21 ITLEVALVAIVLSFIIGSVIGIVRYTKIPVFSQILGFIVEVIRNLPLLLIIFFTYFALPE 80 Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294 + LK ++ ++ +AL+ + AA I+EIVRSGL+++ + Sbjct: 81 ---VGLKLEI---------------------ITAVIVALTIFEAAMISEIVRSGLLSIEK 116 Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354 GQMEAA + GLT+ +A ++LPQA+R ++PPL SQ+++LLK++SLAVA+ +L+ Sbjct: 117 GQMEAARSSGLTYVQALWHIILPQALRRMVPPLVSQFISLLKDTSLAVAISLPELMHNAQ 176 Query: 355 TIINQ 359 I Q Sbjct: 177 IISGQ 181 Score = 36.6 bits (83), Expect = 6.5, Method: Compositional matrix adjust. Identities = 21/61 (34%), Positives = 36/61 (59%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G + T +A ++ + IIG+++G R + + + I VEV RN+P L++IFF Sbjct: 15 LLKGLLITLEVALVAIVLSFIIGSVIGIVRYTKIPVFSQILGFIVEVIRNLPLLLIIFFT 74 Query: 149 Y 149 Y Sbjct: 75 Y 75 >gi|323493012|ref|ZP_08098148.1| ABC-type glutamine transport system, permease component [Vibrio brasiliensis LMG 20546] gi|323312748|gb|EGA65876.1| ABC-type glutamine transport system, permease component [Vibrio brasiliensis LMG 20546] Length = 246 Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 63/208 (30%), Positives = 109/208 (52%), Gaps = 29/208 (13%) Query: 191 VFSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244 V + LG ++SL A R + ++ +++P+L + ++ +G+PTL+ ++L + Sbjct: 57 VLAMTLGFIVSLPALSPLKPLRAINRIYVESIRSIPVLVLLLWVYYGMPTLLDVSLNH-- 114 Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304 F + IAL+ +AF+AE+ R G+ A+ RGQ EAA ALG Sbjct: 115 ---------------------FWAGVIALTIAESAFMAEVFRGGIQAINRGQHEAAEALG 153 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364 L + + RLV+LPQA R I+PPL +Q++ +LK SSL +G +DL ++ + Sbjct: 154 LNYWQKMRLVILPQAFRQILPPLGNQFVYILKMSSLVSVIGLSDLTRRANELVVNEYLPL 213 Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKI 392 EI + YL L ++++ + L +I Sbjct: 214 EIYTFLVLEYLVLILIVSQAVRWLEKRI 241 Score = 36.2 bits (82), Expect = 8.4, Method: Compositional matrix adjust. Identities = 22/70 (31%), Positives = 41/70 (58%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 ++ GF +T ++ M+ A +G +V LS K + I R+YVE R+IP LV++ ++ Sbjct: 41 LVAGFSDTIQVSLLSMVLAMTLGFIVSLPALSPLKPLRAINRIYVESIRSIPVLVLLLWV 100 Query: 149 YKSVLSVLPI 158 Y + ++L + Sbjct: 101 YYGMPTLLDV 110 >gi|269962669|ref|ZP_06177014.1| conserved hypothetical protein [Vibrio harveyi 1DA3] gi|269832592|gb|EEZ86706.1| conserved hypothetical protein [Vibrio harveyi 1DA3] Length = 246 Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 61/210 (29%), Positives = 112/210 (53%), Gaps = 29/210 (13%) Query: 191 VFSFVLGIVLSLFATRLS------RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244 +F+ +G++++L A S + + +++P+L + ++ +G+PTL+ ++L + Sbjct: 57 LFAMTIGLIIALPALSDSPILKWINRVYVEVIRSIPVLVLLLWVYYGMPTLLDVSLNH-- 114 Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304 F + IAL+ +AF+AE+ R G+ A+ RGQ EAA +LG Sbjct: 115 ---------------------FWAGIIALTIAESAFMAEVFRGGIQAISRGQHEAAESLG 153 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364 L + + RLV+LPQA R I+PPL +Q++ +LK SSL +G +DL ++ + Sbjct: 154 LNYWQKMRLVILPQAFRQILPPLGNQFVYILKMSSLVSVIGLSDLTRRANELVVNEYLPL 213 Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIAL 394 EI + YL L ++++ + L +IA+ Sbjct: 214 EIYTFLVLEYLVLILLVSQAVRWLEKRIAI 243 Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust. Identities = 24/70 (34%), Positives = 44/70 (62%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 ++ GF +T ++ M+ A IG ++ LS + ++ WI RVYVEV R+IP LV++ ++ Sbjct: 41 LIAGFNDTIQVSLLSMLFAMTIGLIIALPALSDSPILKWINRVYVEVIRSIPVLVLLLWV 100 Query: 149 YKSVLSVLPI 158 Y + ++L + Sbjct: 101 YYGMPTLLDV 110 >gi|153836333|ref|ZP_01989000.1| amino acid ABC transporter, permease protein [Vibrio parahaemolyticus AQ3810] gi|149750235|gb|EDM60980.1| amino acid ABC transporter, permease protein [Vibrio parahaemolyticus AQ3810] Length = 265 Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 70/218 (32%), Positives = 114/218 (52%), Gaps = 19/218 (8%) Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240 +T++ +A F+ VLG+V +L RLS K G + Y+ +I P LV I L Sbjct: 66 VTLNISAISLFFTLVLGLVTALL--RLS---DSKVGNVIGTTYVE--VIRNTPLLVQIYL 118 Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300 Y + PV+G F + +ALS + A+ AEI R+GL ++P+GQ EAA Sbjct: 119 LYFVF--GPVIGL----------DRFSTAVLALSLFQGAYTAEIFRAGLNSIPKGQFEAA 166 Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 LGL+ + V+LPQ ++ +PPLT++ ++L+KNSS+ + DL + I+++T Sbjct: 167 QTLGLSPFYTYKDVILPQVLQRTLPPLTNEVVSLIKNSSIVSVMAIFDLTTQARNIVSET 226 Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 EI IYL+L++ ++ L K+ +K Sbjct: 227 AMPFEIWFTVAAIYLALTLSLSGLSAWLEHKLGASWRK 264 >gi|218549771|ref|YP_002383562.1| glutamate and aspartate ABC transporter membrane protein [Escherichia fergusonii ATCC 35469] gi|218357312|emb|CAQ89947.1| glutamate and aspartate transporter subunit ; membrane component of ABC superfamily [Escherichia fergusonii ATCC 35469] gi|324114774|gb|EGC08742.1| inner membrane transport system [Escherichia fergusonii B253] Length = 224 Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 45/129 (34%), Positives = 81/129 (62%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 +S +A S + AA+ +EI+R+G+ ++ RGQ AA+ALG+TH ++ +L++LPQA R+++ Sbjct: 96 RLISAMVAFSMFEAAYYSEIIRAGIQSISRGQSSAALALGMTHWQSMKLIILPQAFRAMV 155 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 P L +Q + L +++SL + AD TI + G +E+IL F+Y +S+ +L Sbjct: 156 PLLLTQGIVLFQDTSLVYVLSLADFFRTASTIGERDGTQVEMILFAGFVYFVISLSASLL 215 Query: 385 MNRLNAKIA 393 ++ L + A Sbjct: 216 VSYLKRRTA 224 Score = 41.6 bits (96), Expect = 0.21, Method: Compositional matrix adjust. Identities = 29/92 (31%), Positives = 49/92 (53%), Gaps = 10/92 (10%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G V T + + ++ + GTL+ RLS+ +AW + YV VFR+IP ++V+ + Sbjct: 16 LLDGLVITLKITITAVVIGILWGTLLAVMRLSSFAPIAWFAKAYVNVFRSIPLVMVLLWF 75 Query: 149 Y-------KSVLSVLPIPD---HSIVLPFGMF 170 Y ++VL + P D S ++ F MF Sbjct: 76 YLIVPGFLQNVLGLSPKNDIRLISAMVAFSMF 107 >gi|11497848|ref|NP_069070.1| glutamine ABC transporter, permease protein (glnP) [Archaeoglobus fulgidus DSM 4304] gi|2650409|gb|AAB91000.1| glutamine ABC transporter, permease protein (glnP) [Archaeoglobus fulgidus DSM 4304] Length = 224 Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 62/166 (37%), Positives = 97/166 (58%), Gaps = 15/166 (9%) Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287 +I G P LV I + Y F P +G + PE + IALS + A+IAEIVR+ Sbjct: 65 VIRGTPLLVQILIVY---FGLPAIG-------INLQPEPAGI-IALSICSGAYIAEIVRA 113 Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347 G+ ++P GQMEAA +LG+T+ +A R V+ PQA R+I+P L ++++ LLK+SSL + Sbjct: 114 GIESIPIGQMEAARSLGMTYLQAMRYVIFPQAFRNILPALGNEFIALLKDSSLLSVISIV 173 Query: 348 DLVSVGGTIINQTGQA----IEIILIWMFIYLSLSIMIALFMNRLN 389 +L VG I+N T A + + L ++ + + LS ++A +L Sbjct: 174 ELTRVGRQIVNTTFNAWTPFLGVALFYLMMTIPLSRLVAYSQKKLG 219 Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust. Identities = 21/41 (51%), Positives = 24/41 (58%) Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 IIGT+ G GR+S N L I YVEV R P LV I +Y Sbjct: 39 IIGTIAGLGRVSKNPLPFAISTAYVEVIRGTPLLVQILIVY 79 >gi|59713575|ref|YP_206350.1| amino acid ABC transporter permease protein [Vibrio fischeri ES114] gi|59481823|gb|AAW87462.1| amino acid ABC transporter permease protein [Vibrio fischeri ES114] Length = 264 Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 68/190 (35%), Positives = 100/190 (52%), Gaps = 20/190 (10%) Query: 205 TRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP 264 T L R + GK + LYI LI P LV I L Y F+ G + Sbjct: 87 TALLRLSNSIVGKTISTLYIE--LIRNTPLLVQIYLLY-------------FVFGPFLGL 131 Query: 265 E-FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 E F + +AL+ + A+ AEI+RSGLI +P+GQ EA LGL+ + R V+LPQ +R Sbjct: 132 ERFTTAVLALALFQGAYTAEILRSGLINLPKGQFEACKTLGLSQFNSYRYVVLPQVIRKT 191 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL----IWMFIYLSLSI 379 +P LT++ ++L+KNSS+ + DL + G I++ T EI I++ I LSLS Sbjct: 192 LPSLTNELVSLVKNSSIVSVMAIFDLTTEGRNIVSDTAMPFEIWFTVAAIYLMITLSLSA 251 Query: 380 MIALFMNRLN 389 + A R++ Sbjct: 252 LSAWLEYRMH 261 >gi|329116273|ref|ZP_08244990.1| ABC transporter, permease protein [Streptococcus parauberis NCFD 2020] gi|326906678|gb|EGE53592.1| ABC transporter, permease protein [Streptococcus parauberis NCFD 2020] Length = 724 Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 63/207 (30%), Positives = 109/207 (52%), Gaps = 31/207 (14%) Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPTLVLIALKYQ 243 F + ++G++ + A S+ + + +PL+ ++ F+ +G+P L+ +Q Sbjct: 532 FAIAMIIGLIFGMMAVAPSKALRIISSIFVDVVRGVPLMIVAAFIFWGIPNLIESMTGHQ 591 Query: 244 LHFDKPVLGQFNFIGGSTVSP--EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301 SP +F++ IALS A+IAEIVR G+ AVP GQMEA+ Sbjct: 592 -------------------SPINDFLAATIALSLNGGAYIAEIVRGGIEAVPLGQMEASR 632 Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361 +LG+ ++ R V+LPQA++ ++P +Q++ LK++++ A+G +L G II + Sbjct: 633 SLGIPYKITMRKVILPQAIKVMLPNFINQFVISLKDTTIVSAIGLVELFQTGKIIIARNY 692 Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRL 388 Q+ + I IYL IMI F+ RL Sbjct: 693 QSFRMYAILAIIYL---IMIT-FLTRL 715 >gi|227431442|ref|ZP_03913491.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] gi|227352808|gb|EEJ42985.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] Length = 213 Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 49/122 (40%), Positives = 76/122 (62%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IALS YT+AFIAE VR+G+++V GQME A A GL+ ++ R ++LPQA + +P L +Q Sbjct: 88 IALSLYTSAFIAETVRAGILSVDNGQMEGARANGLSFNQSMRYIVLPQAFKIALPSLGNQ 147 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++NL+KNSS+ VG DL+ G + T +I YL +++ ++ +M L Sbjct: 148 FINLVKNSSILAFVGGLDLMYQGNMVAAATFDTFSTYIIVALFYLVITLPLSYYMQNLER 207 Query: 391 KI 392 K+ Sbjct: 208 KL 209 Score = 39.7 bits (91), Expect = 0.80, Method: Compositional matrix adjust. Identities = 24/69 (34%), Positives = 36/69 (52%) Query: 90 LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 L GF T + +I + I+GT ++ I VYV+VFRNIP L++ FF + Sbjct: 12 LQGFGYTLLSSIIALIISMILGTFFAILQILPQNWAQKIGNVYVQVFRNIPLLIITFFFF 71 Query: 150 KSVLSVLPI 158 V V+P+ Sbjct: 72 LVVAKVIPM 80 >gi|320174701|gb|EFW49833.1| Glutamate Aspartate transport system permease protein GltK [Shigella dysenteriae CDC 74-1112] Length = 204 Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 45/129 (34%), Positives = 81/129 (62%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 +S +A S + AA+ +EI+R+G+ ++ RGQ AA+ALG+TH ++ +L++LPQA R+++ Sbjct: 76 RLISAMVAFSMFEAAYYSEIIRAGIQSISRGQSSAALALGMTHWQSMKLIILPQAFRAMV 135 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 P L +Q + L +++SL + AD TI + G +E+IL F+Y +S+ +L Sbjct: 136 PLLLTQGIVLFQDTSLVYVLSLADFFRTASTIGERDGTQVEMILFAGFVYFVISLSASLL 195 Query: 385 MNRLNAKIA 393 ++ L + A Sbjct: 196 VSYLKRRTA 204 Score = 39.7 bits (91), Expect = 0.91, Method: Compositional matrix adjust. Identities = 25/70 (35%), Positives = 39/70 (55%), Gaps = 10/70 (14%) Query: 111 GTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY-------KSVLSVLPIPD--- 160 GT++ RLS+ VAW + YV VFR+IP ++V+ + Y ++VL + P D Sbjct: 18 GTMLAVMRLSSFAPVAWFAKAYVNVFRSIPLVMVLLWFYLIVPGFLQNVLGLSPKNDIRL 77 Query: 161 HSIVLPFGMF 170 S ++ F MF Sbjct: 78 ISAMVAFSMF 87 >gi|291616686|ref|YP_003519428.1| GltK [Pantoea ananatis LMG 20103] gi|291151716|gb|ADD76300.1| GltK [Pantoea ananatis LMG 20103] gi|327393112|dbj|BAK10534.1| glutamate/aspartate transport system permease protein GltK [Pantoea ananatis AJ13355] Length = 225 Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 48/134 (35%), Positives = 83/134 (61%), Gaps = 4/134 (2%) Query: 262 VSPE----FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317 +SP+ +S +A S + AA+ +EI+R+G+I++ RGQ AA+ALG+T ++ RLV+LP Sbjct: 89 ISPKTDIRLISAMVAFSLFEAAYYSEIIRAGIISIARGQSSAALALGMTQWQSMRLVILP 148 Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377 QA R+++P L +Q + L +++SL + AD TI + G +E+IL +Y + Sbjct: 149 QAFRAMVPLLLTQGIVLFQDTSLVYVLSLADFFRTASTIGERDGTQVEMILFAGLVYFVI 208 Query: 378 SIMIALFMNRLNAK 391 S+ +L ++ L K Sbjct: 209 SLSASLLVSYLKRK 222 Score = 42.0 bits (97), Expect = 0.17, Method: Compositional matrix adjust. Identities = 23/76 (30%), Positives = 42/76 (55%), Gaps = 7/76 (9%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY-- 149 G + TF + + ++ + GTL+ RLS K V+W ++YV +FR++P ++V+ + Y Sbjct: 19 GLMITFKITLTAVVFGILWGTLLAVMRLSTFKPVSWFAKLYVNLFRSVPLVMVLLWFYLV 78 Query: 150 -----KSVLSVLPIPD 160 + VL + P D Sbjct: 79 VPSFLQQVLGISPKTD 94 >gi|282932631|ref|ZP_06338047.1| glutamine ABC transporter permease component [Lactobacillus jensenii 208-1] gi|281303263|gb|EFA95449.1| glutamine ABC transporter permease component [Lactobacillus jensenii 208-1] Length = 120 Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 53/121 (43%), Positives = 77/121 (63%), Gaps = 2/121 (1%) Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333 S YT+AFIAE +R+G+ +V GQME A + G+T+ +A R V+LPQA + IP L +Q++N Sbjct: 1 SLYTSAFIAECIRAGINSVGDGQMEGARSNGMTYMQAMRFVILPQAFKVAIPSLGNQFIN 60 Query: 334 LLKNSS-LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 L+KNSS LA GF DL+ G I + Q + L+ YL L++ ++ +M L KI Sbjct: 61 LIKNSSVLAFVAGF-DLMYQGDVIAFSSFQTVNTYLVVGCFYLVLTLPLSYYMRYLEKKI 119 Query: 393 A 393 A Sbjct: 120 A 120 >gi|258404608|ref|YP_003197350.1| polar amino acid ABC transporter, inner membrane subunit [Desulfohalobium retbaense DSM 5692] gi|257796835|gb|ACV67772.1| polar amino acid ABC transporter, inner membrane subunit [Desulfohalobium retbaense DSM 5692] Length = 269 Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 50/129 (38%), Positives = 79/129 (61%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 F S +ALS + A+ +EI R+G++++ RGQ EAA LGL++ R ++LPQA+R II Sbjct: 137 RFFSAVLALSLFEGAYASEIFRAGIVSIHRGQWEAAYCLGLSNWDMYRKIILPQALRRII 196 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 PPLTSQ ++L+K+S+L + DL G ++ +T A E+ +YL L+I ++ Sbjct: 197 PPLTSQAVSLVKDSALVSTIAVYDLTMRGQALVAETFLAFEVWFTVAGLYLVLTITLSAL 256 Query: 385 MNRLNAKIA 393 L K+A Sbjct: 257 AWGLERKMA 265 >gi|16119635|ref|NP_396341.1| ABC transporter, membrane spanning protein (amino acid) [Agrobacterium tumefaciens str. C58] gi|15162205|gb|AAK90782.1| ABC transporter, membrane spanning protein (amino acid) [Agrobacterium tumefaciens str. C58] Length = 284 Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 66/220 (30%), Positives = 117/220 (53%), Gaps = 10/220 (4%) Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240 LT++ A V ++G ++++ AT KA+ + ++ F G+P +V I Sbjct: 68 LTLELTAGAMVAGIIIGCLVAVMATS-----QNIVLKAIAVAFVWWFR--GVPLIVQIFF 120 Query: 241 KYQLHFDKPVLG--QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQME 298 + + P +G ++ V+P F ++AL + AA ++EI+RSGL AV RGQ E Sbjct: 121 WFNIALFVPEIGFGSWSVSVNDIVTPAFAG-FLALGLHEAANMSEIIRSGLTAVDRGQRE 179 Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN 358 AA +LGL + R V+LPQA+R I+PP +Q + +LK S++ +G DL++ I Sbjct: 180 AASSLGLRPLQTLRTVVLPQAIRLIVPPTGNQAIGMLKASAIVSVIGMQDLLTQAQAIYA 239 Query: 359 QTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 + IE++ + YL ++ + ++ + L K+A K + Sbjct: 240 RNFLVIELLCVASLWYLGITTIASIGQHYLERKLAPKGRS 279 >gi|15800368|ref|NP_286380.1| glutamate/aspartate transport system permease [Escherichia coli O157:H7 EDL933] gi|15829947|ref|NP_308720.1| glutamate/aspartate transport system permease [Escherichia coli O157:H7 str. Sakai] gi|168752224|ref|ZP_02777246.1| glutamate/aspartate ABC transporter, permease protein GltJ [Escherichia coli O157:H7 str. EC4113] gi|168758297|ref|ZP_02783304.1| glutamate/aspartate ABC transporter, permease protein GltJ [Escherichia coli O157:H7 str. EC4401] gi|168764669|ref|ZP_02789676.1| glutamate/aspartate ABC transporter, permease protein GltJ [Escherichia coli O157:H7 str. EC4501] gi|168767101|ref|ZP_02792108.1| glutamate/aspartate ABC transporter, permease protein GltJ [Escherichia coli O157:H7 str. EC4486] gi|168777605|ref|ZP_02802612.1| glutamate/aspartate ABC transporter, permease protein GltJ [Escherichia coli O157:H7 str. EC4196] gi|168779145|ref|ZP_02804152.1| glutamate/aspartate ABC transporter, permease protein GltJ [Escherichia coli O157:H7 str. EC4076] gi|168786504|ref|ZP_02811511.1| glutamate/aspartate ABC transporter, permease protein GltJ [Escherichia coli O157:H7 str. EC869] gi|168802436|ref|ZP_02827443.1| glutamate/aspartate ABC transporter, permease protein GltJ [Escherichia coli O157:H7 str. EC508] gi|195939392|ref|ZP_03084774.1| glutamate/aspartate transport system permease [Escherichia coli O157:H7 str. EC4024] gi|208809108|ref|ZP_03251445.1| glutamate/aspartate ABC transporter, permease protein GltJ [Escherichia coli O157:H7 str. EC4206] gi|208815017|ref|ZP_03256196.1| glutamate/aspartate ABC transporter, permease protein GltJ [Escherichia coli O157:H7 str. EC4045] gi|208822912|ref|ZP_03263230.1| glutamate/aspartate ABC transporter, permease protein GltJ [Escherichia coli O157:H7 str. EC4042] gi|209397185|ref|YP_002269289.1| glutamate/aspartate ABC transporter, permease protein GltJ [Escherichia coli O157:H7 str. EC4115] gi|217326418|ref|ZP_03442502.1| glutamate/aspartate ABC transporter, permease protein GltJ [Escherichia coli O157:H7 str. TW14588] gi|254791818|ref|YP_003076655.1| glutamate and aspartate ABC transporter membrane protein [Escherichia coli O157:H7 str. TW14359] gi|261224123|ref|ZP_05938404.1| glutamate and aspartate transporter subunit, membrane component of ABC superfamily protein [Escherichia coli O157:H7 str. FRIK2000] gi|261257817|ref|ZP_05950350.1| glutamate and aspartate transporter subunit, membrane component of ABC superfamily protein [Escherichia coli O157:H7 str. FRIK966] gi|291281604|ref|YP_003498422.1| Glutamate/aspartate ABC transporter permease protein GltJ [Escherichia coli O55:H7 str. CB9615] gi|12513561|gb|AAG54988.1|AE005244_6 glutamate/aspartate transport system permease [Escherichia coli O157:H7 str. EDL933] gi|13360151|dbj|BAB34116.1| glutamate/aspartate transport system permease [Escherichia coli O157:H7 str. Sakai] gi|187767198|gb|EDU31042.1| glutamate/aspartate ABC transporter, permease protein GltJ [Escherichia coli O157:H7 str. EC4196] gi|188013879|gb|EDU52001.1| glutamate/aspartate ABC transporter, permease protein GltJ [Escherichia coli O157:H7 str. EC4113] gi|189002687|gb|EDU71673.1| glutamate/aspartate ABC transporter, permease protein GltJ [Escherichia coli O157:H7 str. EC4076] gi|189354852|gb|EDU73271.1| glutamate/aspartate ABC transporter, permease protein GltJ [Escherichia coli O157:H7 str. EC4401] gi|189363462|gb|EDU81881.1| glutamate/aspartate ABC transporter, permease protein GltJ [Escherichia coli O157:H7 str. EC4486] gi|189365367|gb|EDU83783.1| glutamate/aspartate ABC transporter, permease protein GltJ [Escherichia coli O157:H7 str. EC4501] gi|189373635|gb|EDU92051.1| glutamate/aspartate ABC transporter, permease protein GltJ [Escherichia coli O157:H7 str. EC869] gi|189375565|gb|EDU93981.1| glutamate/aspartate ABC transporter, permease protein GltJ [Escherichia coli O157:H7 str. EC508] gi|208728909|gb|EDZ78510.1| glutamate/aspartate ABC transporter, permease protein GltJ [Escherichia coli O157:H7 str. EC4206] gi|208731665|gb|EDZ80353.1| glutamate/aspartate ABC transporter, permease protein GltJ [Escherichia coli O157:H7 str. EC4045] gi|208737105|gb|EDZ84789.1| glutamate/aspartate ABC transporter, permease protein GltJ [Escherichia coli O157:H7 str. EC4042] gi|209158585|gb|ACI36018.1| glutamate/aspartate ABC transporter, permease protein GltJ [Escherichia coli O157:H7 str. EC4115] gi|209776918|gb|ACI86771.1| glutamate/aspartate transport system permease [Escherichia coli] gi|209776920|gb|ACI86772.1| glutamate/aspartate transport system permease [Escherichia coli] gi|209776922|gb|ACI86773.1| glutamate/aspartate transport system permease [Escherichia coli] gi|209776924|gb|ACI86774.1| glutamate/aspartate transport system permease [Escherichia coli] gi|209776926|gb|ACI86775.1| glutamate/aspartate transport system permease [Escherichia coli] gi|217322639|gb|EEC31063.1| glutamate/aspartate ABC transporter, permease protein GltJ [Escherichia coli O157:H7 str. TW14588] gi|254591218|gb|ACT70579.1| glutamate and aspartate transporter subunit, membrane component of ABC superfamily [Escherichia coli O157:H7 str. TW14359] gi|290761477|gb|ADD55438.1| Glutamate/aspartate ABC transporter, permease protein GltJ [Escherichia coli O55:H7 str. CB9615] gi|320193060|gb|EFW67700.1| Glutamate Aspartate transport system permease protein GltJ [Escherichia coli O157:H7 str. EC1212] gi|320638105|gb|EFX07869.1| Glutamate/aspartate ABC transporter permease protein GltJ [Escherichia coli O157:H7 str. G5101] gi|320643509|gb|EFX12679.1| Glutamate/aspartate ABC transporter permease protein GltJ [Escherichia coli O157:H- str. 493-89] gi|320648844|gb|EFX17471.1| Glutamate/aspartate ABC transporter permease protein GltJ [Escherichia coli O157:H- str. H 2687] gi|320654428|gb|EFX22475.1| Glutamate/aspartate ABC transporter permease protein GltJ [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320660110|gb|EFX27640.1| Glutamate/aspartate ABC transporter permease protein GltJ [Escherichia coli O55:H7 str. USDA 5905] gi|320664908|gb|EFX32043.1| Glutamate/aspartate ABC transporter permease protein GltJ [Escherichia coli O157:H7 str. LSU-61] gi|326341404|gb|EGD65196.1| Glutamate Aspartate transport system permease protein GltJ [Escherichia coli O157:H7 str. 1044] gi|326345816|gb|EGD69555.1| Glutamate Aspartate transport system permease protein GltJ [Escherichia coli O157:H7 str. 1125] Length = 246 Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 48/129 (37%), Positives = 78/129 (60%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+S + L +TAA + E VR+ + ++PRGQ AA+A+GLT +A R VLLP A R I+P Sbjct: 111 FLSSMLCLGLFTAARVCEQVRAAIQSLPRGQKNAALAMGLTLPQAYRYVLLPNAYRVIVP 170 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 P+TS+ +NL+KNS++A +G D+ + +++ + A E Y+ ++ I L M Sbjct: 171 PMTSEMMNLVKNSAIASTIGLVDMAAQASKLLDYSAHAWESFTAITLAYVFINAFIMLVM 230 Query: 386 NRLNAKIAL 394 + K+ L Sbjct: 231 TLVERKVRL 239 Score = 40.4 bits (93), Expect = 0.50, Method: Compositional matrix adjust. Identities = 24/77 (31%), Positives = 41/77 (53%) Query: 81 SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140 +++Y I GF T L+ I A ++G+ G R N+ ++ + +YVE+FRN+P Sbjct: 17 GNTTYLGWIWSGFQVTIALSICAWIIAFLVGSFFGILRTVPNRFLSGLGTLYVELFRNVP 76 Query: 141 PLVVIFFLYKSVLSVLP 157 +V F Y + +LP Sbjct: 77 LIVQFFTWYLVIPELLP 93 >gi|328554363|gb|AEB24855.1| GlnM [Bacillus amyloliquefaciens TA208] gi|328912767|gb|AEB64363.1| putative glutamine transport system permease protein [Bacillus amyloliquefaciens LL3] Length = 216 Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 49/123 (39%), Positives = 80/123 (65%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IAL+ YT+AFIAE +R+G+ V +GQMEAA + G T+ +A R V+LPQA++ +IPPL +Q Sbjct: 91 IALTIYTSAFIAEAIRAGIQTVSKGQMEAARSSGFTYSQAMRYVILPQAVKIVIPPLGNQ 150 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 +LNL+KNSS+ V DL+ + + T ++ + YL L+I +++ ++ L Sbjct: 151 FLNLVKNSSILGVVAGLDLMYQADLVSSSTLVVFDVYIFVALFYLMLTIPLSIGVHYLER 210 Query: 391 KIA 393 ++ Sbjct: 211 RLG 213 Score = 43.1 bits (100), Expect = 0.069, Method: Compositional matrix adjust. Identities = 21/58 (36%), Positives = 33/58 (56%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 GF++T +F + + +G L+ R++A K + WI YVE RNIP L++ F Y Sbjct: 16 GFLHTLLASFIALAGSFALGVLIAVMRITAFKPIQWIGTAYVEFIRNIPLLLITFVFY 73 >gi|307704348|ref|ZP_07641265.1| binding-protein-dependent transport system inner membrane component family protein [Streptococcus mitis SK597] gi|307622108|gb|EFO01128.1| binding-protein-dependent transport system inner membrane component family protein [Streptococcus mitis SK597] Length = 225 Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 51/131 (38%), Positives = 77/131 (58%), Gaps = 3/131 (2%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P + + + + Y A+IAE++RSG+ ++P GQMEAA++ G T+ A RL++LPQA R I Sbjct: 91 PIYWTAVLCVGLYHGAYIAEVIRSGIQSIPSGQMEAALSQGFTYISAMRLIILPQAFRII 150 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 +PPLT+Q +NL+KN+S + DL+ V + G I L +Y SL +A Sbjct: 151 LPPLTNQIVNLIKNTSTVAIISGVDLMFVTKSWSALNGNYIPAFLGAALLYFSLCFPVAQ 210 Query: 384 F---MNRLNAK 391 F M + N K Sbjct: 211 FGRKMEQANKK 221 Score = 36.6 bits (83), Expect = 6.7, Method: Compositional matrix adjust. Identities = 26/76 (34%), Positives = 39/76 (51%), Gaps = 5/76 (6%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151 GF+ T LA I A +G L GA S ++ + R++VE ++N P LV ++ Sbjct: 20 GFLFTLALAIGSFILAMFLGILFGAMSTSKRPILRILARIFVEFYQNTPLLVQFVIVFYG 79 Query: 152 VLSVLP-IPDHSIVLP 166 LP I DH I++P Sbjct: 80 ----LPLISDHIIMIP 91 >gi|307708312|ref|ZP_07644779.1| ABC transporter membrane-spanning permease - glutamine transport [Streptococcus mitis NCTC 12261] gi|307615758|gb|EFN94964.1| ABC transporter membrane-spanning permease - glutamine transport [Streptococcus mitis NCTC 12261] Length = 225 Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 51/131 (38%), Positives = 77/131 (58%), Gaps = 3/131 (2%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P + + + + Y A+IAE++RSG+ ++P GQMEAA++ G T+ A RL++LPQA R I Sbjct: 91 PIYWTAVLCVGLYHGAYIAEVIRSGIQSIPSGQMEAALSQGFTYISAMRLIILPQAFRII 150 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 +PPLT+Q +NL+KN+S + DL+ V + G I L +Y SL +A Sbjct: 151 LPPLTNQIVNLIKNTSTVAIISGVDLMFVTKSWSALNGNYIPAFLGAALLYFSLCFPVAQ 210 Query: 384 F---MNRLNAK 391 F M + N K Sbjct: 211 FGRKMEQANKK 221 Score = 36.2 bits (82), Expect = 8.9, Method: Compositional matrix adjust. Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 5/76 (6%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151 GF+ T LA I A ++G GA S ++ + R++VE ++N P LV ++ Sbjct: 20 GFLFTLALAIGSFILAMVLGIFFGAMSTSKRPILRILARIFVEFYQNTPLLVQFVIVFYG 79 Query: 152 VLSVLP-IPDHSIVLP 166 LP I DH I++P Sbjct: 80 ----LPLISDHIIMIP 91 >gi|207724231|ref|YP_002254628.1| amino acid transmembrane protein [Ralstonia solanacearum MolK2] gi|206589447|emb|CAQ36408.1| amino acid transmembrane protein [Ralstonia solanacearum MolK2] Length = 262 Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 48/134 (35%), Positives = 84/134 (62%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 +F S +AL+ A+ AE +R+GL+AVP+GQ+EAA +LGL+ V+ PQA + + Sbjct: 128 DFTSACVALAFNAGAYNAESIRAGLLAVPKGQLEAAHSLGLSRWHTFADVIFPQAFKVAL 187 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 PPL + ++ LLK+SSLA A+G +L +VG + T Q + ++ IYL+L+ ++ F Sbjct: 188 PPLVNNFIALLKDSSLAYAIGVVELTNVGNRLQAATFQPLPALVTTAVIYLALTTVLTQF 247 Query: 385 MNRLNAKIALKEKK 398 N + ++ ++ ++ Sbjct: 248 SNAVEQRMDVEGRQ 261 >gi|294338805|emb|CAZ87139.1| Glutamate/aspartate transport system permease protein gltK [Thiomonas sp. 3As] Length = 228 Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 78/234 (33%), Positives = 130/234 (55%), Gaps = 22/234 (9%) Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223 VLPF + +GL++ T+ + A I +LGI+L+L RLS H K L Y Sbjct: 12 VLPFLL----KGLTY-TIQLTVVAAIG--GTLLGILLAL--ARLS---HLKWLSLLAAGY 59 Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF---MSLYIALSCYTAAF 280 I+ L+ +P L++I + +F PV+ Q I GS P+ S Y + AA+ Sbjct: 60 IN--LMRSIPLLLVI---FWFYFLVPVMLQS--ITGSDYPPKIGAERSAYFTFILFEAAY 112 Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340 AEIVR+G+ ++P+GQ+ AA ALGLT+ + RL++LPQA+R+++P L +Q + L ++ SL Sbjct: 113 FAEIVRAGIQSIPKGQLGAAYALGLTYAQTMRLIILPQALRNMLPVLLTQTIVLFQDVSL 172 Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394 + D V I + + +E+ + +Y LS +++ + RL+ +IA+ Sbjct: 173 VALLNVTDFVGAAMKIAQRDSRVVEMYTLVAVVYFVLSFLLSQGVKRLHQRIAI 226 Score = 36.2 bits (82), Expect = 9.9, Method: Compositional matrix adjust. Identities = 21/61 (34%), Positives = 33/61 (54%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G T L I T++G L+ RLS K ++ + Y+ + R+IP L+VIF+ Sbjct: 16 LLKGLTYTIQLTVVAAIGGTLLGILLALARLSHLKWLSLLAAGYINLMRSIPLLLVIFWF 75 Query: 149 Y 149 Y Sbjct: 76 Y 76 >gi|306833970|ref|ZP_07467094.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus bovis ATCC 700338] gi|304423971|gb|EFM27113.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus bovis ATCC 700338] Length = 234 Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 54/168 (32%), Positives = 91/168 (54%), Gaps = 31/168 (18%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 + +FVLG++ ++ SR KA+ +Y+ F + P+ Sbjct: 42 ILAFVLGVIFGAMSSSKSRVL-----KAISRVYVEVFQ------------------NTPL 78 Query: 251 LGQFNFI--------GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302 L QF F+ G + F + + + Y A+IAE++RSG+ AVP+GQ EAA++ Sbjct: 79 LVQFVFVYYGLAIMTNGVIMISTFFTAVLCVGIYHGAYIAEVIRSGIEAVPKGQTEAALS 138 Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 G T+ + L++LPQA+R+I+PPLT+Q +NL+KN+S + AD++ Sbjct: 139 QGFTYSQTMSLIILPQAVRTILPPLTNQVVNLIKNTSTVAIISGADIM 186 Score = 43.1 bits (100), Expect = 0.081, Method: Compositional matrix adjust. Identities = 23/58 (39%), Positives = 36/58 (62%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 GF+ T ++ +I A ++G + GA S ++++ I RVYVEVF+N P LV F+Y Sbjct: 29 GFLYTLGMSICALILAFVLGVIFGAMSSSKSRVLKAISRVYVEVFQNTPLLVQFVFVY 86 >gi|78065232|ref|YP_368001.1| ABC amino acid transporter, inner membrane subunit [Burkholderia sp. 383] gi|77965977|gb|ABB07357.1| L-glutamate ABC transporter membrane protein / L-aspartate ABC transporter membrane protein [Burkholderia sp. 383] Length = 246 Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 47/129 (36%), Positives = 76/129 (58%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + I L +T A + E VRSG+ A+P+GQ A +A+G T + R VLLP A R I+P Sbjct: 111 FTASIICLGLFTGARVCEQVRSGINALPKGQRAAGLAMGFTQWQTYRYVLLPVAYRIIVP 170 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PLTS++LN+ KNS++A +G DL + +++ T Q E + Y+ +++++ FM Sbjct: 171 PLTSEFLNIFKNSAVASTIGLLDLSAQARQLVDYTAQTYESFIAVTLAYVIINLVVMSFM 230 Query: 386 NRLNAKIAL 394 + + L Sbjct: 231 RWIEGRTRL 239 Score = 40.4 bits (93), Expect = 0.53, Method: Compositional matrix adjust. Identities = 25/77 (32%), Positives = 41/77 (53%) Query: 81 SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140 ++Y ++ GF T ++ + A I+G+L G R NK ++ I +YV +FRNIP Sbjct: 18 EPTTYFGWLMSGFWVTIEVSLVAWVIALIVGSLFGVLRTVPNKWLSAIGTLYVSIFRNIP 77 Query: 141 PLVVIFFLYKSVLSVLP 157 +V F Y + +LP Sbjct: 78 LIVQFFVWYLVIPELLP 94 >gi|325274872|ref|ZP_08140885.1| polar amino acid ABC transporter inner membrane subunit [Pseudomonas sp. TJI-51] gi|324099989|gb|EGB97822.1| polar amino acid ABC transporter inner membrane subunit [Pseudomonas sp. TJI-51] Length = 320 Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 69/208 (33%), Positives = 113/208 (54%), Gaps = 15/208 (7%) Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248 I V S LG+V+ LFA L R T + L +Y+ L+ G P LV I + Y F Sbjct: 128 ISVVSGALGLVIGLFAG-LCRLSTNPTLRDLSTVYVE--LVRGTPLLVQIFIFY--FFIG 182 Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308 VL +S EF + AL+ +T A++AEIVR+G+ ++ +GQ EAA +LGL Sbjct: 183 TVL---------NLSREFAGV-AALALFTGAYVAEIVRAGVQSIAKGQNEAARSLGLNAG 232 Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368 ++ R V+LPQA + ++PPL Q+++L+K++SL + +L G I + EI Sbjct: 233 QSMRHVILPQAFKRVLPPLAGQFISLVKDTSLVSVIAITELTKSGREAITTSFSTFEIWF 292 Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKE 396 +YL +++ ++ +RL ++A + Sbjct: 293 CVAGLYLLINLPLSHIASRLERRLAQSD 320 Score = 36.2 bits (82), Expect = 9.5, Method: Compositional matrix adjust. Identities = 21/58 (36%), Positives = 27/58 (46%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 G T W++ +IG G RLS N + + VYVE+ R P LV IF Y Sbjct: 121 GLWTTLWISVVSGALGLVIGLFAGLCRLSTNPTLRDLSTVYVELVRGTPLLVQIFIFY 178 >gi|294789394|ref|ZP_06754631.1| polar amino amino acid ABC transporter, PAAT family, permease protein [Simonsiella muelleri ATCC 29453] gi|294482607|gb|EFG30297.1| polar amino amino acid ABC transporter, PAAT family, permease protein [Simonsiella muelleri ATCC 29453] Length = 260 Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 47/120 (39%), Positives = 77/120 (64%) Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 AL+ A+I EI R+G+ ++ +GQMEAA +LGLT+ +A R ++LPQA+R ++PP+ +++ Sbjct: 134 ALTVNAGAYITEIFRAGIQSIDKGQMEAARSLGLTYAQAMRFIILPQALRRMLPPIANEF 193 Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 + LLK+SSLA A+ A+L V TI + E + IYL +++ ++ RL K Sbjct: 194 ITLLKDSSLASAIAVAELAYVQKTISGRYSIYEEPLYTIALIYLIMTMCLSWIFTRLEKK 253 >gi|240140777|ref|YP_002965257.1| glutamate and aspartate transporter subunit ; membrane component of ABC superfamily [Methylobacterium extorquens AM1] gi|240010754|gb|ACS41980.1| glutamate and aspartate transporter subunit ; membrane component of ABC superfamily [Methylobacterium extorquens AM1] Length = 240 Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 67/211 (31%), Positives = 110/211 (52%), Gaps = 12/211 (5%) Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249 + +F LG V+ + R +T A+ Y+ F +P LV + L Y F P Sbjct: 40 WAIAFTLGSVVGVM-----RTLPSRTANAIGAAYVEGFR--NVPLLVQMFLWY---FVLP 89 Query: 250 VLGQFNFIGGSTVSPE--FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307 L P+ F + + L +TAA +AE VR+G+ A+PRGQ +A +ALGLT Sbjct: 90 ELLPARLSSAVKQMPDAPFYTAVLCLGFFTAARVAEQVRAGIRALPRGQAQAGLALGLTW 149 Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367 + R VLLP A R I+PPLTS++LN LKN+S+A+ +G +L + ++ + Q E Sbjct: 150 AQTYRAVLLPNAYRIILPPLTSEFLNNLKNTSVALTIGLLELTARARSMQEFSFQVFEAF 209 Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 +Y++L++++ L ++A+ + Sbjct: 210 TAATLLYVALNLVVIAGATLLERRVAVPGGR 240 Score = 37.4 bits (85), Expect = 4.5, Method: Compositional matrix adjust. Identities = 32/104 (30%), Positives = 46/104 (44%), Gaps = 12/104 (11%) Query: 83 SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142 +YA +L G T A A +G++VG R ++ I YVE FRN+P L Sbjct: 19 GTYADMLLSGLAWTVVTALCSWAIAFTLGSVVGVMRTLPSRTANAIGAAYVEGFRNVPLL 78 Query: 143 VVIFFLYKSVLSVLP---------IPD---HSIVLPFGMFLNNR 174 V +F Y + +LP +PD ++ VL G F R Sbjct: 79 VQMFLWYFVLPELLPARLSSAVKQMPDAPFYTAVLCLGFFTAAR 122 >gi|147669042|ref|YP_001213860.1| polar amino acid ABC transporter, inner membrane subunit [Dehalococcoides sp. BAV1] gi|146269990|gb|ABQ16982.1| amino acid ABC transporter membrane protein, PAAT family [Dehalococcoides sp. BAV1] Length = 273 Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 52/156 (33%), Positives = 94/156 (60%), Gaps = 10/156 (6%) Query: 211 FHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY 270 F+ + + +PLL + F P ++ + L+F P+L N+ +P M+++ Sbjct: 98 FYVEIVRGIPLLVQLIWWYFAFPVIIQ-TIGQALNFG-PML---NY----QANPIVMAIW 148 Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 CY A+++EI R+G+ ++P+GQMEAA +LG++H +A R ++LPQA+R I+PP+ ++ Sbjct: 149 GMTFCY-GAYMSEIYRAGIQSIPKGQMEAARSLGMSHTQAMRFIILPQALRVILPPMGNE 207 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 +++LLK++SL V AD+V +G IE+ Sbjct: 208 FISLLKDTSLVSTVAVADMVRLGREFTATNFNPIEV 243 >gi|300693430|ref|YP_003749403.1| amino acid transmembrane ABC transporter protein [Ralstonia solanacearum PSI07] gi|299075467|emb|CBJ34761.1| putative amino acid transmembrane ABC transporter protein [Ralstonia solanacearum PSI07] Length = 262 Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 48/134 (35%), Positives = 84/134 (62%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 +F S +AL+ A+ AE +R+GL+AVP+GQ+EAA +LGL+ V+ PQA + + Sbjct: 128 DFTSACVALAFNAGAYNAESIRAGLLAVPKGQLEAAHSLGLSRWHTFADVIFPQAFKVAL 187 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 PPL + +++LLK+SSLA A+G +L +VG + T Q + ++ IYL L+ ++ F Sbjct: 188 PPLVNNFISLLKDSSLAYAIGVVELTNVGNRLQAATFQPLPALVTTAVIYLVLTTVLTQF 247 Query: 385 MNRLNAKIALKEKK 398 N + ++ ++ ++ Sbjct: 248 SNAVEQRMDVEGRR 261 >gi|170703106|ref|ZP_02893925.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria IOP40-10] gi|170131985|gb|EDT00494.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria IOP40-10] Length = 246 Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 46/129 (35%), Positives = 76/129 (58%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + + L +T A + E VRSG+ A+P+GQ A +A+G T + R VLLP A R I+P Sbjct: 111 FTASIVCLGLFTGARVCEQVRSGINALPKGQRAAGLAMGFTQWQTYRYVLLPVAYRIIVP 170 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PLTS++LN+ KNS++A +G DL + +++ T Q E + Y+ +++++ FM Sbjct: 171 PLTSEFLNIFKNSAVASTIGLLDLSAQARQLVDYTAQTYESFIAVTLAYVVINLVVMSFM 230 Query: 386 NRLNAKIAL 394 + + L Sbjct: 231 RWIEGRTRL 239 Score = 42.0 bits (97), Expect = 0.16, Method: Compositional matrix adjust. Identities = 27/77 (35%), Positives = 41/77 (53%) Query: 81 SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140 ++Y ++ GF T ++ + A I+G+L G R NK ++ I VYV +FRNIP Sbjct: 18 EPTTYFGWLMSGFWVTIEVSLVAWVIALIVGSLFGVLRTVPNKWLSAIGTVYVSIFRNIP 77 Query: 141 PLVVIFFLYKSVLSVLP 157 +V F Y V +LP Sbjct: 78 LIVQFFVWYLVVPELLP 94 >gi|253987651|ref|YP_003039007.1| amino acid ABC transporter permease [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253779101|emb|CAQ82261.1| similar to amino acid permease component of abc transporter [Photorhabdus asymbiotica] Length = 245 Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 50/130 (38%), Positives = 81/130 (62%), Gaps = 1/130 (0%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 EF++ +I L+ Y+A F+AE +R+G+ + RGQ AA ALGLT +A R V+LPQA++ + Sbjct: 113 EFLAGFIGLTLYSAPFVAEELRAGIQGIGRGQKYAAHALGLTGWQAMRYVVLPQALKIAM 172 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL-SLSIMIAL 383 PPL QY+N++KNSSL +A+G A+L + +T + E + +Y+ ++++M Sbjct: 173 PPLLGQYMNIVKNSSLTMAIGVAELSYASRQVETETLKTFEAFGVATVLYIATIAVMEGW 232 Query: 384 FMNRLNAKIA 393 R IA Sbjct: 233 GQWRQQQAIA 242 Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 26/74 (35%), Positives = 42/74 (56%) Query: 84 SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143 Y + GF+ T W++F ++ +T++G L+ A R S K++ W Y +FRN P LV Sbjct: 14 QYLEWLWQGFLITLWISFCTVVASTLLGFLLAAARDSQLKILRWPVTAYTTLFRNTPLLV 73 Query: 144 VIFFLYKSVLSVLP 157 +FF Y + +LP Sbjct: 74 QLFFWYFASGQILP 87 >gi|206561694|ref|YP_002232459.1| glutamate/aspartate transport system permease [Burkholderia cenocepacia J2315] gi|198037736|emb|CAR53680.1| glutamate/aspartate transport system permease protein [Burkholderia cenocepacia J2315] Length = 246 Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 46/129 (35%), Positives = 76/129 (58%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + + L +T A + E VRSG+ A+P+GQ A +A+G T + R VLLP A R I+P Sbjct: 111 FTASIVCLGLFTGARVCEQVRSGINALPKGQRAAGLAMGFTQWQTYRYVLLPVAYRIIVP 170 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PLTS++LN+ KNS++A +G DL + +++ T Q E + Y+ +++++ FM Sbjct: 171 PLTSEFLNIFKNSAVASTIGLLDLSAQARQLVDYTAQTYESFIAVTLAYVLINLVVMAFM 230 Query: 386 NRLNAKIAL 394 + + L Sbjct: 231 RWIEGRTRL 239 Score = 41.6 bits (96), Expect = 0.22, Method: Compositional matrix adjust. Identities = 26/77 (33%), Positives = 41/77 (53%) Query: 81 SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140 ++Y ++ GF T ++ + A I+G+L G R NK ++ I VYV +FRNIP Sbjct: 18 EPTTYFGWLMSGFWVTIEVSLVAWVIALIVGSLFGVLRTVPNKWLSAIGTVYVSIFRNIP 77 Query: 141 PLVVIFFLYKSVLSVLP 157 +V F Y + +LP Sbjct: 78 LIVQFFVWYLVIPELLP 94 >gi|229494909|ref|ZP_04388660.1| glutamine ABC transporter, permease/substrate-binding protein [Rhodococcus erythropolis SK121] gi|229318133|gb|EEN84003.1| glutamine ABC transporter, permease/substrate-binding protein [Rhodococcus erythropolis SK121] Length = 482 Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 56/176 (31%), Positives = 96/176 (54%), Gaps = 23/176 (13%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 + PLL + F+ FG+P AL +Q+ F + I LS Sbjct: 328 RGTPLLVQAFFIYFGIPA----ALHFQMS-------------------AFTAGIITLSLN 364 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 A++AEIVR G+++V +GQMEA+ +LG+++ K+ R V++PQA+R++IP +Q++ LK Sbjct: 365 AGAYMAEIVRGGILSVDKGQMEASRSLGISYMKSMRKVIMPQAIRTMIPSYINQFVITLK 424 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 ++S+ +G A+L G II + Q+ + LI +Y + + + NRL +I Sbjct: 425 DTSILSVIGLAELTQTGRIIIARNFQSFNMWLIIGVMYFIIIMALTKLSNRLEKRI 480 Score = 38.1 bits (87), Expect = 2.1, Method: Compositional matrix adjust. Identities = 31/96 (32%), Positives = 45/96 (46%), Gaps = 13/96 (13%) Query: 107 ATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLP 166 A ++G + G R+S N V I YV++FR P LV FF+Y IP L Sbjct: 298 ALVLGAIFGLCRVSTNMFVRGIGTTYVDIFRGTPLLVQAFFIY------FGIP---AALH 348 Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL 202 F M G+ +T+ NA ++ V G +LS+ Sbjct: 349 FQMSAFTAGI----ITLSLNAGAYMAEIVRGGILSV 380 >gi|113866077|ref|YP_724566.1| ABC transporter permease [Ralstonia eutropha H16] gi|113524853|emb|CAJ91198.1| ABC-type transporter, permease component: PAAT family [Ralstonia eutropha H16] Length = 222 Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 47/129 (36%), Positives = 82/129 (63%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P F+ I L Y+ A+++EIVR + +V +GQMEAA ++G++ +A R V+LPQA+ + Sbjct: 87 PAFVCGVIGLGIYSGAYVSEIVRGAIQSVDKGQMEAARSIGMSSGQAMRAVILPQAIVRM 146 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 IPPL ++++ L+KNS+L + ADL+ G II+ + +++E+ L +YL L+ L Sbjct: 147 IPPLGNEFIALIKNSALVSLLTIADLMHEGQKIISVSYRSLEVYLAIALVYLILTSAAGL 206 Query: 384 FMNRLNAKI 392 + R ++ Sbjct: 207 ILRRAEQRL 215 >gi|89100885|ref|ZP_01173735.1| Amino acid ABC-type transporter, permease component [Bacillus sp. NRRL B-14911] gi|89084421|gb|EAR63572.1| Amino acid ABC-type transporter, permease component [Bacillus sp. NRRL B-14911] Length = 226 Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 63/199 (31%), Positives = 111/199 (55%), Gaps = 14/199 (7%) Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252 +F LG++L+ F L+R K AL Y+ F G P LV I + L F P +G Sbjct: 35 TFALGLILAFFVA-LARLSSIKPLVALARFYVWIFR--GTPLLVQI---FILFFGLPSVG 88 Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312 T+ P F + IA + A+ +EI+R+ ++++P+GQ EAA ++G+T +A R Sbjct: 89 -------ITLDP-FPAAVIAFTLNKGAYSSEIIRAAILSIPKGQWEAASSVGMTRSQAMR 140 Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372 +++PQA+R +PPL + +++L+K++SLA + ++ G I T + + + + F Sbjct: 141 RIIVPQAVRVSLPPLGNSFISLVKDTSLAATITVTEMFQKGQQIAAATYEPLWLYIEVAF 200 Query: 373 IYLSLSIMIALFMNRLNAK 391 IYL S +++ F N+L + Sbjct: 201 IYLIFSTVLSYFQNKLEDR 219 >gi|226307850|ref|YP_002767810.1| glutamine ABC transporter glutamine-binding/permease protein [Rhodococcus erythropolis PR4] gi|226186967|dbj|BAH35071.1| putative glutamine ABC transporter glutamine-binding/permease protein [Rhodococcus erythropolis PR4] Length = 482 Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 56/176 (31%), Positives = 96/176 (54%), Gaps = 23/176 (13%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 + PLL + F+ FG+P AL +Q+ F + I LS Sbjct: 328 RGTPLLVQAFFIYFGIPA----ALHFQMS-------------------AFTAGIITLSLN 364 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 A++AEIVR G+++V +GQMEA+ +LG+++ K+ R V++PQA+R++IP +Q++ LK Sbjct: 365 AGAYMAEIVRGGILSVDKGQMEASRSLGISYMKSMRKVIMPQAIRTMIPSYINQFVITLK 424 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 ++S+ +G A+L G II + Q+ + LI +Y + + + NRL +I Sbjct: 425 DTSILSVIGLAELTQTGRIIIARNFQSFNMWLIIGVMYFIIIMALTKLSNRLEKRI 480 Score = 38.5 bits (88), Expect = 2.1, Method: Compositional matrix adjust. Identities = 31/96 (32%), Positives = 45/96 (46%), Gaps = 13/96 (13%) Query: 107 ATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLP 166 A ++G + G R+S N V I YV++FR P LV FF+Y IP L Sbjct: 298 ALVLGAIFGLCRVSTNMFVRGIGTTYVDIFRGTPLLVQAFFIY------FGIP---AALH 348 Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL 202 F M G+ +T+ NA ++ V G +LS+ Sbjct: 349 FQMSAFTAGI----ITLSLNAGAYMAEIVRGGILSV 380 >gi|172059652|ref|YP_001807304.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia ambifaria MC40-6] gi|171992169|gb|ACB63088.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria MC40-6] Length = 246 Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 46/129 (35%), Positives = 76/129 (58%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + + L +T A + E VRSG+ A+P+GQ A +A+G T + R VLLP A R I+P Sbjct: 111 FTASIVCLGLFTGARVCEQVRSGINALPKGQRAAGLAMGFTQWQTYRYVLLPVAYRIIVP 170 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PLTS++LN+ KNS++A +G DL + +++ T Q E + Y+ +++++ FM Sbjct: 171 PLTSEFLNIFKNSAVASTIGLLDLSAQARQLVDYTAQTYESFIAVTLAYVVINLVVMSFM 230 Query: 386 NRLNAKIAL 394 + + L Sbjct: 231 RWIEGRTRL 239 Score = 42.4 bits (98), Expect = 0.14, Method: Compositional matrix adjust. Identities = 27/77 (35%), Positives = 41/77 (53%) Query: 81 SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140 ++Y ++ GF T ++ + A I+G+L G R NK ++ I VYV +FRNIP Sbjct: 18 EPTTYFGWLMSGFWVTIEVSLVAWVIALIVGSLFGVLRTVPNKWLSAIGTVYVSIFRNIP 77 Query: 141 PLVVIFFLYKSVLSVLP 157 +V F Y V +LP Sbjct: 78 LIVQFFIWYLVVPELLP 94 >gi|17545201|ref|NP_518603.1| glutamate/aspartate transmembrane ABC transporter protein [Ralstonia solanacearum GMI1000] gi|17427492|emb|CAD14010.1| probable glutamate/aspartate transmembrane abc transporter protein [Ralstonia solanacearum GMI1000] Length = 242 Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 46/129 (35%), Positives = 78/129 (60%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+ + L +TAA + E VRSG+ ++PRGQ A +A+G T + R V+LP A R I+P Sbjct: 107 FLCAMLCLGTFTAARVCEQVRSGINSLPRGQRNAGLAMGFTLAQTYRHVMLPMAFRIIVP 166 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PLTS++LN+ KNS++A +G +L + G +++ T Q E + +Y+ +++ + M Sbjct: 167 PLTSEFLNIFKNSAVASTIGLLELAAQGRQLVDYTAQPYESFIAVTLMYMLINLTVMGIM 226 Query: 386 NRLNAKIAL 394 + A+ L Sbjct: 227 RWVEARTRL 235 Score = 43.9 bits (102), Expect = 0.044, Method: Compositional matrix adjust. Identities = 25/81 (30%), Positives = 44/81 (54%) Query: 81 SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140 + +Y +L G T L S I A ++G+++G R +K ++ + YVE+FRNIP Sbjct: 16 QNQTYLDWLLSGLKTTIALGLSSWIIALVLGSVLGVLRTVPSKALSGLATAYVELFRNIP 75 Query: 141 PLVVIFFLYKSVLSVLPIPDH 161 +V +F Y + ++P D+ Sbjct: 76 LIVQLFIWYFVMPELVPGGDY 96 >gi|257092716|ref|YP_003166357.1| polar amino acid ABC transporter inner membrane subunit [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257045240|gb|ACV34428.1| polar amino acid ABC transporter, inner membrane subunit [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 245 Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 73/239 (30%), Positives = 122/239 (51%), Gaps = 22/239 (9%) Query: 167 FGMFLNNRGLSFPTLTMD-TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTG--KALPLLY 223 +G+FL PT T D T + F + I LSL A ++ G + +P + Sbjct: 7 WGIFLQ------PTATGDGTYLGWMFYGFKVTIALSLSAWFIALVLGAVVGILRTVPNKW 60 Query: 224 ISTF------LIFGLPTLVLIALKYQLHFDKPVLGQFN----FIGGSTVSPEFMSLYIAL 273 +S F + +P LV + L Y F P L N F + + +F+S + L Sbjct: 61 LSGFATAYVEVFRNIPLLVQLFLWY---FVMPELLPENLGNAFKQSNPIVQQFLSSMVCL 117 Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333 + +T+A +AE VRSG+ ++P GQ A +A+G T + R VLLP A+R I+PPLTS++LN Sbjct: 118 ALFTSARVAEQVRSGINSLPPGQKNAGLAMGFTLSQTYRYVLLPMAVRLIVPPLTSEFLN 177 Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 + KNS++ +G +L + G +++ T Q E + YL +++++ M + + Sbjct: 178 IFKNSAVCSTIGLLELAAQGRQLVDYTAQPYESFIAVTLAYLLINVVVMFGMRWVEEHV 236 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 30/78 (38%), Positives = 41/78 (52%) Query: 80 TSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNI 139 T D +Y + GF T L+ S A ++G +VG R NK ++ YVEVFRNI Sbjct: 16 TGDGTYLGWMFYGFKVTIALSLSAWFIALVLGAVVGILRTVPNKWLSGFATAYVEVFRNI 75 Query: 140 PPLVVIFFLYKSVLSVLP 157 P LV +F Y + +LP Sbjct: 76 PLLVQLFLWYFVMPELLP 93 >gi|303246865|ref|ZP_07333142.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio fructosovorans JJ] gi|302491882|gb|EFL51762.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio fructosovorans JJ] Length = 231 Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 67/179 (37%), Positives = 104/179 (58%), Gaps = 20/179 (11%) Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280 L+YI +I G+P L+++ + +F PVL G T+ PE S IAL +T+A+ Sbjct: 63 LIYIE--IIRGIPLLMVV---FWFYFLAPVLF------GHTL-PEAQSALIALIVFTSAY 110 Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340 IAEIVR+G+ A+P+GQMEAA GL+H +A V+LPQA+ ++IP +Q+++L K++SL Sbjct: 111 IAEIVRAGVQALPKGQMEAARGTGLSHFQAMTHVILPQALFNMIPSFVNQFVSLTKDTSL 170 Query: 341 AVAVGFADLVSVGGTIINQTGQA-----IEIILIWM---FIYLSLSIMIALFMNRLNAK 391 A +G +L + N+T A I I L++ F LS + +NR A+ Sbjct: 171 AFIIGVNELTKAATQVNNRTLTAPTEIFITIALLYFVICFCLTELSRWLEKHINRYQAR 229 Score = 40.4 bits (93), Expect = 0.54, Method: Compositional matrix adjust. Identities = 23/67 (34%), Positives = 33/67 (49%) Query: 83 SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142 Y L G T LA G+ A +G G R+S L+ W +Y+E+ R IP L Sbjct: 16 GGYPRGPLGGLAMTVLLAVGGIFGAFWLGLGCGLLRISKKPLLRWPALIYIEIIRGIPLL 75 Query: 143 VVIFFLY 149 +V+F+ Y Sbjct: 76 MVVFWFY 82 >gi|254563287|ref|YP_003070382.1| glutamate and aspartate ABC transporter membrane protein [Methylobacterium extorquens DM4] gi|254270565|emb|CAX26568.1| glutamate and aspartate transporter subunit ; membrane component of ABC superfamily [Methylobacterium extorquens DM4] Length = 240 Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 67/211 (31%), Positives = 110/211 (52%), Gaps = 12/211 (5%) Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249 + +F LG V+ + R +T A+ Y+ F +P LV + L Y F P Sbjct: 40 WAIAFTLGSVVGVM-----RTLPSRTANAIGAAYVEGFR--NVPLLVQMFLWY---FVLP 89 Query: 250 VLGQFNFIGGSTVSPE--FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307 L P+ F + + L +TAA +AE VR+G+ A+PRGQ +A +ALGLT Sbjct: 90 ELLPARLGAAVKQMPDAPFYTAVLCLGFFTAARVAEQVRAGIRALPRGQAQAGLALGLTW 149 Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367 + R VLLP A R I+PPLTS++LN LKN+S+A+ +G +L + ++ + Q E Sbjct: 150 AQTYRAVLLPNAYRIILPPLTSEFLNNLKNTSVALTIGLLELTARARSMQEFSFQVFEAF 209 Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 +Y++L++++ L ++A+ + Sbjct: 210 TAATLLYVALNLVVIAGATLLERRVAVPGGR 240 Score = 37.4 bits (85), Expect = 4.4, Method: Compositional matrix adjust. Identities = 32/104 (30%), Positives = 46/104 (44%), Gaps = 12/104 (11%) Query: 83 SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142 +YA +L G T A A +G++VG R ++ I YVE FRN+P L Sbjct: 19 GTYADMLLSGLAWTVVTALCSWAIAFTLGSVVGVMRTLPSRTANAIGAAYVEGFRNVPLL 78 Query: 143 VVIFFLYKSVLSVLP---------IPD---HSIVLPFGMFLNNR 174 V +F Y + +LP +PD ++ VL G F R Sbjct: 79 VQMFLWYFVLPELLPARLGAAVKQMPDAPFYTAVLCLGFFTAAR 122 >gi|153949784|ref|YP_001403106.1| polar amino acid ABC transporter permease [Yersinia pseudotuberculosis IP 31758] gi|152961279|gb|ABS48740.1| polar amino amino acid ABC transporter, PAAT family, permease protein [Yersinia pseudotuberculosis IP 31758] Length = 245 Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 44/96 (45%), Positives = 68/96 (70%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 EF++ ++ L+ Y+ AFIAE +R+G+ V +GQ AA ALGLT ++ R V+LPQA++ + Sbjct: 113 EFLAGFVGLTLYSTAFIAEELRAGISGVAKGQKYAAHALGLTGWQSMRYVVLPQALKIAM 172 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 PPL QY+N++KNSSLA+A+G A+L + +T Sbjct: 173 PPLLGQYMNIIKNSSLAMAIGVAELSYASRQVETET 208 Score = 41.2 bits (95), Expect = 0.29, Method: Compositional matrix adjust. Identities = 23/66 (34%), Positives = 36/66 (54%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151 GF+ T W++ ++ AT++G L+ A R S K + Y +FRN P L+ +FF Y + Sbjct: 22 GFLLTLWISACTVVAATLLGFLLAAARDSELKALKGFAIGYSALFRNTPLLIQLFFWYFA 81 Query: 152 VLSVLP 157 LP Sbjct: 82 ASQFLP 87 >gi|238783036|ref|ZP_04627063.1| Binding-protein-dependent transport system inner membrane component [Yersinia bercovieri ATCC 43970] gi|238716037|gb|EEQ08022.1| Binding-protein-dependent transport system inner membrane component [Yersinia bercovieri ATCC 43970] Length = 245 Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 45/96 (46%), Positives = 68/96 (70%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 EF++ +I L+ Y+ AFIAE +R+G+ V +GQ AA ALGLT ++ R V+LPQA++ + Sbjct: 113 EFLAGFIGLTLYSTAFIAEELRAGISGVAKGQKYAAHALGLTGWQSMRHVVLPQALKIAM 172 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 PPL QY+N++KNSSLA+A+G A+L + +T Sbjct: 173 PPLLGQYMNIIKNSSLAMAIGVAELSYASRQVETET 208 Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 33/102 (32%), Positives = 51/102 (50%), Gaps = 8/102 (7%) Query: 84 SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143 Y + GF+ T W++ ++ +T++G L+ A R S N+ + W Y +FRN P L+ Sbjct: 14 QYLGWLWSGFLLTLWISACTVVASTLLGFLLAAARDSENRALQWFAMGYSTLFRNTPLLI 73 Query: 144 VIFFLYKSVLSVLP---IP----DHSIVLPFGMFLNNRGLSF 178 +FF Y + +LP IP H I L G+ LN F Sbjct: 74 QLFFWYFAASQLLPASWIPWLNSSHEITL-LGLTLNWPSFEF 114 >gi|116671349|ref|YP_832282.1| polar amino acid ABC transporter inner membrane subunit [Arthrobacter sp. FB24] gi|116611458|gb|ABK04182.1| amino acid ABC transporter membrane protein 1, PAAT family [Arthrobacter sp. FB24] Length = 216 Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 52/127 (40%), Positives = 82/127 (64%), Gaps = 1/127 (0%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IALS YTAAFIAE VRSG+ +VP GQ EAA ++G+ + L++LPQA+R++IPPL + Sbjct: 90 IALSAYTAAFIAEAVRSGVNSVPVGQAEAARSIGMKFGQVLSLIILPQALRTVIPPLINI 149 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM-FIYLSLSIMIALFMNRLN 389 + L+KNSS+A A +L G + N G A+ +L+ + F YL +++ + + + + Sbjct: 150 LIALVKNSSVAGAFFVLELFGYGRQLANANGDAVLAVLLGVAFFYLLITVPLGILASTVE 209 Query: 390 AKIALKE 396 K+A+ Sbjct: 210 RKVAIAR 216 >gi|15967001|ref|NP_387354.1| putative amino-acid transport system permease ABC transporter protein [Sinorhizobium meliloti 1021] gi|307302469|ref|ZP_07582226.1| polar amino acid ABC transporter, inner membrane subunit [Sinorhizobium meliloti BL225C] gi|307316201|ref|ZP_07595645.1| polar amino acid ABC transporter, inner membrane subunit [Sinorhizobium meliloti AK83] gi|15076274|emb|CAC47827.1| Putative amino-acid transport system permease ABC transporter [Sinorhizobium meliloti 1021] gi|306898041|gb|EFN28783.1| polar amino acid ABC transporter, inner membrane subunit [Sinorhizobium meliloti AK83] gi|306903139|gb|EFN33729.1| polar amino acid ABC transporter, inner membrane subunit [Sinorhizobium meliloti BL225C] Length = 273 Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 67/224 (29%), Positives = 119/224 (53%), Gaps = 38/224 (16%) Query: 190 FVFSFVLGIVLSLFATRLSRH--------FHEKTGKALPLLYISTFLIF-GLPTLVLIAL 240 FV + VLG+ ++L A LS H F+ + + +P+L + ++ F G P LV +A Sbjct: 61 FVLATVLGLGVALMA--LSEHVVLRQIARFYTEVIRGVPILVLLFYIAFVGAPALVTVA- 117 Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYI------------ALSCYTAAFIAEIVRSG 288 NF+ +S ++ ++ AL +AFIAE+ R+G Sbjct: 118 --------------NFVAAPLISAGWIEPFVVRDVSLMWRAIMALMIGYSAFIAEVFRAG 163 Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348 + +V +GQ+EAA ALGL+ + RLV+ PQA+R I+PPL + ++ ++K+SSL +G AD Sbjct: 164 IQSVDKGQVEAAKALGLSRYQRFRLVVFPQAIRVILPPLGNDFVAMVKDSSLVSVLGVAD 223 Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 + +G + + + E I ++YL L+I ++L + + ++ Sbjct: 224 ITQMGKVYASGSFRFFETYSIVAYVYLVLTIGLSLALRAVERRL 267 >gi|22127992|ref|NP_671415.1| ABC transporter permease [Yersinia pestis KIM 10] gi|45443740|ref|NP_995279.1| ABC transporter permease [Yersinia pestis biovar Microtus str. 91001] gi|51598240|ref|YP_072431.1| ABC amino acid transporter, permease subunit [Yersinia pseudotuberculosis IP 32953] gi|108810145|ref|YP_654061.1| ABC transporter permease [Yersinia pestis Antiqua] gi|108814127|ref|YP_649894.1| ABC transporter permease [Yersinia pestis Nepal516] gi|145601163|ref|YP_001165239.1| ABC transporter permease [Yersinia pestis Pestoides F] gi|150260956|ref|ZP_01917684.1| ABC transporter permease [Yersinia pestis CA88-4125] gi|162421222|ref|YP_001608460.1| polar amino acid ABC transporter permease [Yersinia pestis Angola] gi|165926152|ref|ZP_02221984.1| polar amino amino acid ABC transporter, PAAT family, permease protein [Yersinia pestis biovar Orientalis str. F1991016] gi|165939972|ref|ZP_02228509.1| polar amino amino acid ABC transporter, PAAT family, permease protein [Yersinia pestis biovar Orientalis str. IP275] gi|166009637|ref|ZP_02230535.1| polar amino amino acid ABC transporter, PAAT family, permease protein [Yersinia pestis biovar Antiqua str. E1979001] gi|166213221|ref|ZP_02239256.1| polar amino amino acid ABC transporter, PAAT family, permease protein [Yersinia pestis biovar Antiqua str. B42003004] gi|167401564|ref|ZP_02307058.1| polar amino amino acid ABC transporter, PAAT family, permease protein [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167422869|ref|ZP_02314622.1| polar amino amino acid ABC transporter, PAAT family, permease protein [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167425464|ref|ZP_02317217.1| polar amino amino acid ABC transporter, PAAT family, permease protein [Yersinia pestis biovar Mediaevalis str. K1973002] gi|167468127|ref|ZP_02332831.1| polar amino amino acid ABC transporter, PAAT family, permease protein [Yersinia pestis FV-1] gi|170026442|ref|YP_001722947.1| polar amino acid ABC transporter inner membrane subunit [Yersinia pseudotuberculosis YPIII] gi|186897481|ref|YP_001874593.1| polar amino acid ABC transporter inner membrane subunit [Yersinia pseudotuberculosis PB1/+] gi|218931086|ref|YP_002348961.1| ABC transporter permease [Yersinia pestis CO92] gi|229839818|ref|ZP_04459977.1| ABC transporter permease [Yersinia pestis biovar Orientalis str. PEXU2] gi|229841903|ref|ZP_04462059.1| ABC transporter permease [Yersinia pestis biovar Orientalis str. India 195] gi|229896780|ref|ZP_04511943.1| ABC transporter permease [Yersinia pestis Pestoides A] gi|229904668|ref|ZP_04519779.1| ABC transporter permease [Yersinia pestis Nepal516] gi|270488379|ref|ZP_06205453.1| ABC transporter, permease protein [Yersinia pestis KIM D27] gi|294505633|ref|YP_003569695.1| ABC transporter permease [Yersinia pestis Z176003] gi|21961138|gb|AAM87666.1|AE014013_11 putative glutamate/aspartate ABC transport system permease protein [Yersinia pestis KIM 10] gi|45438610|gb|AAS64156.1| ABC transporter permease [Yersinia pestis biovar Microtus str. 91001] gi|51591522|emb|CAH23194.1| ABC amino acid transporter, permease subunit [Yersinia pseudotuberculosis IP 32953] gi|108777775|gb|ABG20294.1| ABC transporter permease [Yersinia pestis Nepal516] gi|108782058|gb|ABG16116.1| ABC transporter permease [Yersinia pestis Antiqua] gi|115349697|emb|CAL22678.1| ABC transporter permease [Yersinia pestis CO92] gi|145212859|gb|ABP42266.1| ABC transporter permease [Yersinia pestis Pestoides F] gi|149290364|gb|EDM40441.1| ABC transporter permease [Yersinia pestis CA88-4125] gi|162354037|gb|ABX87985.1| polar amino amino acid ABC transporter, PAAT family, permease protein [Yersinia pestis Angola] gi|165912098|gb|EDR30738.1| polar amino amino acid ABC transporter, PAAT family, permease protein [Yersinia pestis biovar Orientalis str. IP275] gi|165922012|gb|EDR39189.1| polar amino amino acid ABC transporter, PAAT family, permease protein [Yersinia pestis biovar Orientalis str. F1991016] gi|165991559|gb|EDR43860.1| polar amino amino acid ABC transporter, PAAT family, permease protein [Yersinia pestis biovar Antiqua str. E1979001] gi|166205519|gb|EDR49999.1| polar amino amino acid ABC transporter, PAAT family, permease protein [Yersinia pestis biovar Antiqua str. B42003004] gi|166958261|gb|EDR55282.1| polar amino amino acid ABC transporter, PAAT family, permease protein [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167048946|gb|EDR60354.1| polar amino amino acid ABC transporter, PAAT family, permease protein [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167055478|gb|EDR65271.1| polar amino amino acid ABC transporter, PAAT family, permease protein [Yersinia pestis biovar Mediaevalis str. K1973002] gi|169752976|gb|ACA70494.1| polar amino acid ABC transporter, inner membrane subunit [Yersinia pseudotuberculosis YPIII] gi|186700507|gb|ACC91136.1| polar amino acid ABC transporter, inner membrane subunit [Yersinia pseudotuberculosis PB1/+] gi|229678786|gb|EEO74891.1| ABC transporter permease [Yersinia pestis Nepal516] gi|229691242|gb|EEO83295.1| ABC transporter permease [Yersinia pestis biovar Orientalis str. India 195] gi|229696184|gb|EEO86231.1| ABC transporter permease [Yersinia pestis biovar Orientalis str. PEXU2] gi|229700218|gb|EEO88254.1| ABC transporter permease [Yersinia pestis Pestoides A] gi|262363798|gb|ACY60519.1| ABC transporter permease [Yersinia pestis D106004] gi|262367734|gb|ACY64291.1| ABC transporter permease [Yersinia pestis D182038] gi|270336883|gb|EFA47660.1| ABC transporter, permease protein [Yersinia pestis KIM D27] gi|294356092|gb|ADE66433.1| ABC transporter permease [Yersinia pestis Z176003] gi|320017442|gb|ADW01014.1| ABC transporter permease [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 245 Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 44/96 (45%), Positives = 68/96 (70%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 EF++ ++ L+ Y+ AFIAE +R+G+ V +GQ AA ALGLT ++ R V+LPQA++ + Sbjct: 113 EFLAGFVGLTLYSTAFIAEELRAGISGVAKGQKYAAHALGLTGWQSMRYVVLPQALKIAM 172 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 PPL QY+N++KNSSLA+A+G A+L + +T Sbjct: 173 PPLLGQYMNIIKNSSLAMAIGVAELSYASRQVETET 208 Score = 41.6 bits (96), Expect = 0.24, Method: Compositional matrix adjust. Identities = 36/118 (30%), Positives = 58/118 (49%), Gaps = 17/118 (14%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151 GF+ T W++ ++ AT++G L+ A R S K + Y +FRN P L+ +FF Y + Sbjct: 22 GFLLTLWISACTVVAATLLGFLLAAARDSELKALKGFAIGYSALFRNTPLLIQLFFWYFA 81 Query: 152 VLSVLP---IPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIV-LSLFAT 205 LP IP + P + L L++P+ F F+ G V L+L++T Sbjct: 82 ASQFLPASWIP--WLNTPHEITLAGLTLAWPS-----------FEFLAGFVGLTLYST 126 >gi|78356431|ref|YP_387880.1| amino acid ABC transporter permease [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78218836|gb|ABB38185.1| amino acid ABC transporter membrane protein, PAAT family [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 337 Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 67/200 (33%), Positives = 105/200 (52%), Gaps = 31/200 (15%) Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240 +T++ + VF G++ L R+S + K G + YI LI G P LV I L Sbjct: 133 VTLEVSLISIVFGITFGVLTGL--ARISENPALKWGA---ITYIE--LIRGSPLLVQIFL 185 Query: 241 KYQLHFDKPVLGQFNFIGGSTVS-----------PEFMSLYIALSCYTAAFIAEIVRSGL 289 Y F+ G+ V+ P +ALS +T A++AEIVR+G+ Sbjct: 186 WY-------------FVAGTLVNNLLMQAGLGQVPPMWFGVLALSVFTGAYVAEIVRAGI 232 Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349 +V RGQMEAA +LGL + +A R V+LPQA R I+PPL Q+++L+K+SSL + +L Sbjct: 233 QSVHRGQMEAARSLGLNYSQAMRKVILPQAFRRIMPPLAGQFISLVKDSSLLGVIAIREL 292 Query: 350 VSVGGTIINQTGQAIEIILI 369 +++ + Q E+ ++ Sbjct: 293 TKATREVVSSSLQPFELWIL 312 >gi|325525014|gb|EGD02926.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia sp. TJI49] Length = 246 Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 46/129 (35%), Positives = 76/129 (58%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + + L +T A + E VRSG+ A+P+GQ A +A+G T + R VLLP A R I+P Sbjct: 111 FTASIVCLGLFTGARVCEQVRSGINALPKGQRAAGLAMGFTQWQTYRYVLLPVAYRIIVP 170 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PLTS++LN+ KNS++A +G DL + +++ T Q E + Y+ +++++ FM Sbjct: 171 PLTSEFLNIFKNSAVASTIGLLDLSAQARQLVDYTAQTYESFIAVTLAYVLINLVVMAFM 230 Query: 386 NRLNAKIAL 394 + + L Sbjct: 231 RWIEGRTRL 239 Score = 42.4 bits (98), Expect = 0.13, Method: Compositional matrix adjust. Identities = 27/77 (35%), Positives = 41/77 (53%) Query: 81 SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140 ++Y ++ GF T ++ + A I+G+L G R NK ++ I VYV +FRNIP Sbjct: 18 EPTTYFGWLMSGFWVTIEVSLVAWVIALIVGSLFGVLRTVPNKWLSAIGTVYVSIFRNIP 77 Query: 141 PLVVIFFLYKSVLSVLP 157 +V F Y V +LP Sbjct: 78 LIVQFFIWYLVVPELLP 94 >gi|188583628|ref|YP_001927073.1| polar amino acid ABC transporter inner hypothetical protein [Methylobacterium populi BJ001] gi|179347126|gb|ACB82538.1| polar amino acid ABC transporter, inner membrane subunit [Methylobacterium populi BJ001] Length = 240 Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 69/219 (31%), Positives = 114/219 (52%), Gaps = 12/219 (5%) Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALK 241 T+ T ++ +F LG V+ + R + A+ Y+ F +P LV + L Sbjct: 32 TVATALCSWIIAFALGSVVGVM-----RTLPSRAANAVGAAYVEGFR--NVPLLVQMFLW 84 Query: 242 YQLHFDKPVLGQFNFIGGSTVSPE--FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299 Y F P L + P+ F + + L +TAA +AE VR+GL ++PRGQ +A Sbjct: 85 Y---FVLPELLPRDLGTAVKQMPDAPFYTAVLCLGFFTAARVAEQVRAGLRSLPRGQAQA 141 Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359 A+ALGLT + R VLLP A R I+PPLTS++LN LKN+S+A+ +G +L + + Sbjct: 142 ALALGLTRAQTYRHVLLPNAYRIILPPLTSEFLNNLKNTSVALTIGLLELTARARAMQEF 201 Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 + Q E +Y++L++++ L ++A+ + Sbjct: 202 SFQVFEAFTAATLLYVALNLVVIAGATLLERRVAVPGGR 240 Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust. Identities = 32/104 (30%), Positives = 47/104 (45%), Gaps = 12/104 (11%) Query: 83 SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142 +YA +L G T A I A +G++VG R ++ + YVE FRN+P L Sbjct: 19 GTYADMLLSGLAWTVATALCSWIIAFALGSVVGVMRTLPSRAANAVGAAYVEGFRNVPLL 78 Query: 143 VVIFFLYKSVLSVLP---------IPD---HSIVLPFGMFLNNR 174 V +F Y + +LP +PD ++ VL G F R Sbjct: 79 VQMFLWYFVLPELLPRDLGTAVKQMPDAPFYTAVLCLGFFTAAR 122 >gi|107021747|ref|YP_620074.1| amino acid ABC transporter permease [Burkholderia cenocepacia AU 1054] gi|116688693|ref|YP_834316.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia cenocepacia HI2424] gi|170731990|ref|YP_001763937.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia cenocepacia MC0-3] gi|254246321|ref|ZP_04939642.1| ABC-type arginine transport system, permease component [Burkholderia cenocepacia PC184] gi|105891936|gb|ABF75101.1| L-glutamate ABC transporter membrane protein / L-aspartate ABC transporter membrane protein [Burkholderia cenocepacia AU 1054] gi|116646782|gb|ABK07423.1| L-aspartate ABC transporter membrane protein / L-glutamate ABC transporter membrane protein [Burkholderia cenocepacia HI2424] gi|124871097|gb|EAY62813.1| ABC-type arginine transport system, permease component [Burkholderia cenocepacia PC184] gi|169815232|gb|ACA89815.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia cenocepacia MC0-3] Length = 246 Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 46/129 (35%), Positives = 76/129 (58%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + + L +T A + E VRSG+ A+P+GQ A +A+G T + R VLLP A R I+P Sbjct: 111 FTASIVCLGLFTGARVCEQVRSGINALPKGQRAAGLAMGFTQWQTYRYVLLPVAYRIIVP 170 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PLTS++LN+ KNS++A +G DL + +++ T Q E + Y+ +++++ FM Sbjct: 171 PLTSEFLNIFKNSAVASTIGLLDLSAQARQLVDYTAQTYESFIAVTLAYVLINLVVMAFM 230 Query: 386 NRLNAKIAL 394 + + L Sbjct: 231 RWIEGRTRL 239 Score = 42.7 bits (99), Expect = 0.097, Method: Compositional matrix adjust. Identities = 27/77 (35%), Positives = 41/77 (53%) Query: 81 SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140 ++Y ++ GF T ++ + A I+G+L G R NK +A I VYV +FRNIP Sbjct: 18 EPTTYFGWLMSGFWVTIEVSLVAWVIALIVGSLFGVLRTVPNKWLAAIGTVYVSIFRNIP 77 Query: 141 PLVVIFFLYKSVLSVLP 157 +V F Y + +LP Sbjct: 78 LIVQFFVWYLVIPELLP 94 >gi|301066996|ref|YP_003789019.1| amino acid ABC transporter permease [Lactobacillus casei str. Zhang] gi|300439403|gb|ADK19169.1| ABC-type amino acid transport system, permease component [Lactobacillus casei str. Zhang] Length = 214 Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 54/122 (44%), Positives = 76/122 (62%), Gaps = 2/122 (1%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I L YT+AFIAE VR+G+ AVP GQME A ++G+T+ +A ++ PQA + +IPPL +Q Sbjct: 90 IGLLIYTSAFIAETVRAGIEAVPGGQMEGARSIGMTYNQAMIQIIFPQAFKMVIPPLGNQ 149 Query: 331 YLNLLKNSS-LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 ++NL+KNSS LA GF DL+ G I T + LI YL L++ ++ M L Sbjct: 150 FINLVKNSSVLAFVAGF-DLMYQGKLIAATTFSTFDTYLIVGIFYLVLTMPLSYLMRYLE 208 Query: 390 AK 391 K Sbjct: 209 KK 210 >gi|284992300|ref|YP_003410854.1| polar amino acid ABC transporter inner membrane subunit [Geodermatophilus obscurus DSM 43160] gi|284065545|gb|ADB76483.1| polar amino acid ABC transporter, inner membrane subunit [Geodermatophilus obscurus DSM 43160] Length = 215 Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 64/185 (34%), Positives = 105/185 (56%), Gaps = 25/185 (13%) Query: 211 FHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY 270 F+ +T + PL + F+IFGLP Q+ F V+G F G+ +S Sbjct: 53 FYVETFRNTPLTVVFFFIIFGLP---------QIDF---VIG---FFPGAVLS------- 90 Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + YTAAF+ E VRSG+ AV GQ EAA ALGLT +A R V+LPQA R+++PPL + Sbjct: 91 --VGLYTAAFVCEAVRSGVNAVSGGQAEAARALGLTFGQALREVVLPQAFRTVVPPLGNV 148 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIIN-QTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 + ++KN+S+A +DL S+ ++N G +++ + Y+ +++ AL +N++ Sbjct: 149 LIAMVKNTSIAAGFSVSDLSSLLPRLVNADAGDLTLVLVGVVVGYMVITLPSALAVNQIE 208 Query: 390 AKIAL 394 ++A+ Sbjct: 209 RRVAI 213 >gi|104784121|ref|YP_610619.1| amino acid ABC transporter permease [Pseudomonas entomophila L48] gi|95113108|emb|CAK17836.1| putative amino acid ABC transporter, permease protein [Pseudomonas entomophila L48] Length = 229 Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 68/191 (35%), Positives = 106/191 (55%), Gaps = 17/191 (8%) Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239 TLT++ A + +L I L + R SRH++ + ALP YI F G P LV + Sbjct: 18 TLTLELVAIAVIAGLILAIPLGI--ARSSRHWYVR---ALPYGYI--FFFRGTPLLVQLF 70 Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295 L Y L QF+ + S++ P F + ++ +TAA+IAEI+R L A+PRG Sbjct: 71 LVYY------GLAQFDLVRDSSLWPYLRDPFWCTVLTMTLHTAAYIAEILRGALQAIPRG 124 Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355 ++EAA ALG++ KA ++LP+A R +P +++ + +LK S+LA V +L + T Sbjct: 125 EIEAARALGMSRGKALFYIMLPRAARIGLPAYSNEVILMLKASALASTVTLLELTGMART 184 Query: 356 IINQTGQAIEI 366 II +T +EI Sbjct: 185 IIARTYLPVEI 195 >gi|299067959|emb|CBJ39173.1| glutamate/aspartate transport protein; ABC superfamily, membrane component [Ralstonia solanacearum CMR15] Length = 242 Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 46/117 (39%), Positives = 76/117 (64%), Gaps = 2/117 (1%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+ + L +TAA + E VRSG+ ++PRGQ A +A+G T + R V+LP A R I+P Sbjct: 107 FLCAMLCLGTFTAARVCEQVRSGINSLPRGQRNAGLAMGFTLAQTYRHVMLPMAFRIIVP 166 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE--IILIWMFIYLSLSIM 380 PLTS++LN+ KNS++A +G +L + G +++ T Q E I + M++ ++L++M Sbjct: 167 PLTSEFLNIFKNSAVASTIGLLELAAQGRQLVDYTAQPYESFIAVTLMYMLINLTVM 223 Score = 42.4 bits (98), Expect = 0.13, Method: Compositional matrix adjust. Identities = 25/81 (30%), Positives = 44/81 (54%) Query: 81 SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140 + +Y +L G T L S I A ++G+++G R +K ++ + YVE+FRNIP Sbjct: 16 QNQTYLDWLLSGLKITIALGLSSWIIALVLGSVLGVLRTVPSKALSGLATAYVELFRNIP 75 Query: 141 PLVVIFFLYKSVLSVLPIPDH 161 +V +F Y + ++P D+ Sbjct: 76 LIVQLFIWYFVMPELVPGGDY 96 >gi|320547238|ref|ZP_08041531.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus equinus ATCC 9812] gi|320448126|gb|EFW88876.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus equinus ATCC 9812] Length = 234 Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 57/189 (30%), Positives = 98/189 (51%), Gaps = 40/189 (21%) Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229 FL G+SF L + +F+LG++ ++ K +A+ +Y+ F Sbjct: 30 FLYTLGMSFCAL---------ILAFILGVIFGAMSSS-----KNKILRAIARVYVEVFQ- 74 Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFI--------GGSTVSPEFMSLYIALSCYTAAFI 281 + P+L QF F+ G+ + F + + + Y A+I Sbjct: 75 -----------------NTPLLVQFVFVYYGLAIMTNGAIMISTFFTAVLCVGIYHGAYI 117 Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341 AE++RSG+ AVP+GQ EAA++ G T+ + L++LPQA+R+I+PPLT+Q +NL+KN+S Sbjct: 118 AEVIRSGIEAVPKGQTEAALSQGFTYSQTMSLIILPQAVRTILPPLTNQVVNLIKNTSTV 177 Query: 342 VAVGFADLV 350 + AD++ Sbjct: 178 AIISGADIM 186 Score = 49.7 bits (117), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 27/58 (46%), Positives = 37/58 (63%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 GF+ T ++F +I A I+G + GA S NK++ I RVYVEVF+N P LV F+Y Sbjct: 29 GFLYTLGMSFCALILAFILGVIFGAMSSSKNKILRAIARVYVEVFQNTPLLVQFVFVY 86 >gi|241759295|ref|ZP_04757401.1| binding-protein-dependent transport system inner membrane protein [Neisseria flavescens SK114] gi|241320431|gb|EER56728.1| binding-protein-dependent transport system inner membrane protein [Neisseria flavescens SK114] Length = 248 Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 49/121 (40%), Positives = 76/121 (62%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +AL + A+I EI R+G+ ++ +GQMEAA +LGLT+ +A R V+LPQA+R ++PPL S+ Sbjct: 122 LALIANSGAYICEIFRAGIQSIDKGQMEAARSLGLTYTQAMRYVILPQALRRMLPPLASE 181 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++ LLK+SSL +G A+L V TI + E + IYL L+ + RL + Sbjct: 182 FITLLKDSSLLSVIGVAELAYVQSTITGRYSVYEEPLYTIALIYLVLTSFLGWVFLRLES 241 Query: 391 K 391 + Sbjct: 242 R 242 >gi|257126581|ref|YP_003164695.1| polar amino acid ABC transporter inner membrane protein [Leptotrichia buccalis C-1013-b] gi|257050520|gb|ACV39704.1| polar amino acid ABC transporter, inner membrane subunit [Leptotrichia buccalis C-1013-b] Length = 237 Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 53/130 (40%), Positives = 80/130 (61%), Gaps = 2/130 (1%) Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315 F+ G +SPE + I +S AF+AEI R G+ A+ GQMEAA +LGL+ KA R V+ Sbjct: 100 FLNGQQMSPEIAGV-IIISLNAGAFLAEIFRGGIQAIDTGQMEAARSLGLSFGKAMRKVI 158 Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI-Y 374 LPQA++++IP + +Q++ LK++SL + +G ADL+ G + E +LI I Y Sbjct: 159 LPQAIKNMIPAILNQFITSLKDTSLLMVIGVADLMGKGQIAFKTNYKTFETMLIIALIYY 218 Query: 375 LSLSIMIALF 384 L + I+ LF Sbjct: 219 LVIKILSTLF 228 >gi|322373408|ref|ZP_08047944.1| glutamine ABC transporter, glutamine-binding protein/permease protein [Streptococcus sp. C150] gi|321278450|gb|EFX55519.1| glutamine ABC transporter, glutamine-binding protein/permease protein [Streptococcus sp. C150] Length = 731 Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 58/209 (27%), Positives = 105/209 (50%), Gaps = 23/209 (11%) Query: 190 FVFSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243 F + ++G++ + A R+ + +PL+ ++ F+ +G+P L+ Sbjct: 539 FAIAMIIGVIFGMMAVAPNKTLRVISQVFVDVVRGIPLMIVAAFIYWGIPNLIE------ 592 Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 N G + +F++ IALS A+IAEIVR G+ AVP GQMEA+ +L Sbjct: 593 -----------NITGHQSPINDFVAATIALSLNGGAYIAEIVRGGIEAVPIGQMEASRSL 641 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363 G+ + R V+LPQA+R ++P +Q++ LK++++ A+G +L G II + Q+ Sbjct: 642 GVPYNTTMRKVILPQAVRLMLPNFINQFVISLKDTTIVSAIGLVELFQTGKIIIARNYQS 701 Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392 + I +YL + + RL ++ Sbjct: 702 FRMYAILAILYLVIITFLTKLAKRLEKRL 730 >gi|312797282|ref|YP_004030204.1| glutamate/aspartate transport system permease protein gltK [Burkholderia rhizoxinica HKI 454] gi|312169057|emb|CBW76060.1| Glutamate/aspartate transport system permease protein gltK [Burkholderia rhizoxinica HKI 454] Length = 226 Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 46/136 (33%), Positives = 84/136 (61%), Gaps = 4/136 (2%) Query: 262 VSPE----FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317 VSP+ +S +A S + AA+ +EI+R+G+ AVPRGQ+ AA ALG+T+ + RL++LP Sbjct: 90 VSPDVDIRLVSAMVAFSLFEAAYYSEIIRAGIQAVPRGQLSAASALGMTYGQGMRLIVLP 149 Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377 QA+R+++P L +Q + L +++SL + AD + ++ G +E++L +Y + Sbjct: 150 QALRAMVPLLLTQAIVLFQDTSLVYVISVADFFQTAANVGDRDGTIVEMVLFAGAVYFVV 209 Query: 378 SIMIALFMNRLNAKIA 393 ++ + + L K+A Sbjct: 210 CVVASSLVKGLQKKVA 225 >gi|307329226|ref|ZP_07608391.1| polar amino acid ABC transporter, inner membrane subunit [Streptomyces violaceusniger Tu 4113] gi|306885125|gb|EFN16146.1| polar amino acid ABC transporter, inner membrane subunit [Streptomyces violaceusniger Tu 4113] Length = 215 Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 50/126 (39%), Positives = 80/126 (63%), Gaps = 2/126 (1%) Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 AL CYT++F+ E VRSG+ AVP GQ EAA +LG+T + RL++ PQA RS+IPP++S + Sbjct: 91 ALGCYTSSFVCEAVRSGINAVPLGQAEAARSLGMTFFQTLRLIVFPQATRSVIPPMSSIF 150 Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM-FIYLSLSIMIALFMNRLNA 390 + L KNS++A A +L +V +++ G AI I +W+ YL ++ I+ L + Sbjct: 151 IALTKNSAIAGAFSNTELFNV-SKLLSDKGFAIGWIFLWIALCYLVITFAISGLFRLLES 209 Query: 391 KIALKE 396 ++ + Sbjct: 210 RLEVAR 215 >gi|319791542|ref|YP_004153182.1| polar amino acid ABC transporter, inner membrane subunit [Variovorax paradoxus EPS] gi|315594005|gb|ADU35071.1| polar amino acid ABC transporter, inner membrane subunit [Variovorax paradoxus EPS] Length = 243 Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 56/134 (41%), Positives = 80/134 (59%), Gaps = 4/134 (2%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P F+ + +AL +T+A IAE VRSG+ A+P+GQ A +A+G T + R V+LP A R I Sbjct: 99 PSFILVVLALGFFTSARIAEQVRSGIQALPKGQRYAGMAVGFTTTQYYRYVILPMAYRII 158 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 IPPLTS+ +N+ KNSS+A AV +L +T + IE+ L Y ++ AL Sbjct: 159 IPPLTSETMNIFKNSSVAFAVSVTELTMFAMQAQEETSRGIEVYLAVTACY----VVSAL 214 Query: 384 FMNRLNAKIALKEK 397 +NRL A I K + Sbjct: 215 AINRLMAFIEKKTR 228 >gi|322377819|ref|ZP_08052308.1| amino acid ABC transporter, permease protein [Streptococcus sp. M334] gi|321281242|gb|EFX58253.1| amino acid ABC transporter, permease protein [Streptococcus sp. M334] Length = 225 Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 72/233 (30%), Positives = 113/233 (48%), Gaps = 40/233 (17%) Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFAT----------RLSRHFHEKTG 216 FG F N G F TL + + F+ + VLGI+ +T R+ F++ T Sbjct: 14 FGQFFN--GFLF-TLALAIGS--FILAMVLGILFGAMSTSKRPILRILARIFVEFYQNT- 67 Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 PLL + +GLP + D ++ P + + + + Y Sbjct: 68 ---PLLVQFVIVFYGLPLIS----------DHIIM-----------IPIYWTAVLCVGLY 103 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 A+IAE++RSG+ ++P GQMEAA++ G T+ A RL++LPQA R I+PPLT+Q +NL+K Sbjct: 104 HGAYIAEVIRSGIQSIPSGQMEAALSQGFTYISAMRLIILPQAFRIILPPLTNQIVNLIK 163 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 N+S + DL+ V + G I L +Y SL +A F ++ Sbjct: 164 NTSTVAIISGVDLMFVTKSWSALNGNYIPAFLGAALLYFSLCFPVAQFGRKIE 216 Score = 37.7 bits (86), Expect = 3.1, Method: Compositional matrix adjust. Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 5/76 (6%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151 GF+ T LA I A ++G L GA S ++ + R++VE ++N P LV ++ Sbjct: 20 GFLFTLALAIGSFILAMVLGILFGAMSTSKRPILRILARIFVEFYQNTPLLVQFVIVFYG 79 Query: 152 VLSVLP-IPDHSIVLP 166 LP I DH I++P Sbjct: 80 ----LPLISDHIIMIP 91 >gi|228477049|ref|ZP_04061687.1| glutamine ABC transporter permease protein [Streptococcus salivarius SK126] gi|228251068|gb|EEK10239.1| glutamine ABC transporter permease protein [Streptococcus salivarius SK126] Length = 732 Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 58/209 (27%), Positives = 105/209 (50%), Gaps = 23/209 (11%) Query: 190 FVFSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243 F + ++G++ + A R+ + +PL+ ++ F+ +G+P L+ Sbjct: 540 FAIAMIIGVIFGMMAVAPNKTLRVISQVFVDVVRGIPLMIVAAFIYWGIPNLIE------ 593 Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 N G + +F++ IALS A+IAEIVR G+ AVP GQMEA+ +L Sbjct: 594 -----------NITGHQSPINDFVAATIALSLNGGAYIAEIVRGGIEAVPIGQMEASRSL 642 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363 G+ + R V+LPQA+R ++P +Q++ LK++++ A+G +L G II + Q+ Sbjct: 643 GVPYNTTMRKVILPQAVRLMLPNFINQFVISLKDTTIVSAIGLVELFQTGKIIIARNYQS 702 Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392 + I +YL + + RL ++ Sbjct: 703 FRMYAILAILYLVIITCLTKLAKRLEKRL 731 >gi|50123385|ref|YP_052552.1| binding-protein-dependent transport system inner membrane component [Pectobacterium atrosepticum SCRI1043] gi|49613911|emb|CAG77364.1| binding-protein-dependent transport system inner membrane component [Pectobacterium atrosepticum SCRI1043] Length = 247 Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 78/217 (35%), Positives = 109/217 (50%), Gaps = 40/217 (18%) Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209 +S+ S L P + I L G FL G+S T+ + T VLG +L+ A R S+ Sbjct: 6 QSLESWLLAPQYLIWLWHG-FLITLGISLGTVVLST---------VLGFLLA--AARDSQ 53 Query: 210 HFHEKTG---------KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFN----- 255 H G + PLL F FG L F V+ N Sbjct: 54 -IHVLRGVVVAYSSLFRNTPLLVQLFFWYFGAGQL----------FSSEVMQWLNTPHSI 102 Query: 256 -FIGGSTVSP--EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312 G + P EF++ L+ Y++AFIAE +RSG+ V RGQ AA ALGLT ++ R Sbjct: 103 SLWGATLAWPSFEFLAGLAGLTLYSSAFIAEEIRSGIRGVARGQKYAAQALGLTGWQSMR 162 Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349 V+LPQA++ +PPL QY+N++KNSSL +A+G A+L Sbjct: 163 YVVLPQALKIALPPLLGQYMNIVKNSSLTMAIGVAEL 199 >gi|300705160|ref|YP_003746763.1| glutamate/aspartate ABC transporter membrane component [Ralstonia solanacearum CFBP2957] gi|299072824|emb|CBJ44180.1| glutamate/aspartate transport protein; ABC superfamily, membrane component [Ralstonia solanacearum CFBP2957] Length = 242 Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 45/129 (34%), Positives = 78/129 (60%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+ + L +TAA + E VRSG+ ++PRGQ A +A+G T + R ++LP A R I+P Sbjct: 107 FLCAMLCLGTFTAARVCEQVRSGINSLPRGQRNAGLAMGFTLAQTYRHIMLPMAFRIIVP 166 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PLTS++LN+ KNS++A +G +L + G +++ T Q E + +Y+ +++ + M Sbjct: 167 PLTSEFLNIFKNSAVASTIGLLELAAQGRQLVDYTAQPYESFIAVTLMYMLINLTVMGIM 226 Query: 386 NRLNAKIAL 394 + A+ L Sbjct: 227 RWVEARTRL 235 Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust. Identities = 26/81 (32%), Positives = 45/81 (55%) Query: 81 SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140 + +Y +L G T L S I A ++G+++G R NK+++ + YVE+FRNIP Sbjct: 16 QNQTYLDWLLSGLKTTIALGLSSWIIALVLGSVLGVLRTVPNKVLSGLATAYVELFRNIP 75 Query: 141 PLVVIFFLYKSVLSVLPIPDH 161 +V +F Y + ++P D+ Sbjct: 76 LIVQLFIWYFVMPELVPGGDY 96 >gi|152987811|ref|YP_001349399.1| ABC transporter permease [Pseudomonas aeruginosa PA7] gi|150962969|gb|ABR84994.1| probable permease of ABC transporter [Pseudomonas aeruginosa PA7] Length = 222 Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 63/203 (31%), Positives = 102/203 (50%), Gaps = 23/203 (11%) Query: 196 LGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249 LG VL+L S+ G +++PLL + T+ F +P + L++ D P Sbjct: 35 LGTVLALMRLSSSKLLSNIAGFYVNYFRSIPLLLVITWFYFAVPFI----LRWITGEDTP 90 Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309 V F S +A + AA+ EIVR+G+ A+P+GQM AA ALG+T+ + Sbjct: 91 V-------------GAFTSCLVAFMMFEAAYYCEIVRAGIQAIPKGQMGAAQALGMTYGQ 137 Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369 RLV+LPQA R + P L Q + L +++SL VG D ++ + + GQA E ++ Sbjct: 138 TMRLVILPQAFRKMTPLLLQQSIILFQDTSLVYTVGLMDFLNSARSRGDIIGQANEFLIF 197 Query: 370 WMFIYLSLSIMIALFMNRLNAKI 392 +Y +S + + RL ++ Sbjct: 198 AGLVYFVVSFTASFAVKRLQKRL 220 Score = 37.4 bits (85), Expect = 4.4, Method: Compositional matrix adjust. Identities = 23/61 (37%), Positives = 37/61 (60%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151 G + T L G++ +GT++ RLS++KL++ I YV FR+IP L+VI + Y + Sbjct: 17 GMLMTLKLMVLGVLGGVALGTVLALMRLSSSKLLSNIAGFYVNYFRSIPLLLVITWFYFA 76 Query: 152 V 152 V Sbjct: 77 V 77 >gi|322516335|ref|ZP_08069261.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus vestibularis ATCC 49124] gi|322125173|gb|EFX96562.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus vestibularis ATCC 49124] Length = 732 Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 54/176 (30%), Positives = 94/176 (53%), Gaps = 17/176 (9%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 + +PL+ ++ F+ +G+P L+ N G + +F++ IALS Sbjct: 573 RGIPLMIVAAFIYWGIPNLIE-----------------NITGHQSPINDFVAATIALSLN 615 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 A+IAEIVR G+ AVP GQMEA+ +LG+ + R V+LPQA+R ++P +Q++ LK Sbjct: 616 GGAYIAEIVRGGIEAVPIGQMEASRSLGVPYNTTMRKVILPQAVRLMLPNFINQFVISLK 675 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 ++++ A+G +L G II + Q+ + I +YL + + RL ++ Sbjct: 676 DTTIVSAIGLVELFQTGKIIIARNYQSFRMYAILAILYLVIITCLTKLAKRLEKRL 731 >gi|183598117|ref|ZP_02959610.1| hypothetical protein PROSTU_01482 [Providencia stuartii ATCC 25827] gi|188020276|gb|EDU58316.1| hypothetical protein PROSTU_01482 [Providencia stuartii ATCC 25827] Length = 226 Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 72/209 (34%), Positives = 114/209 (54%), Gaps = 12/209 (5%) Query: 186 NAKIFVFSFVLGIVLS--LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243 AKI + + V+GI+ L RLS K LY++TF +P LV++ L + Sbjct: 24 TAKITITAIVVGILWGTVLAVMRLSTF---KPISWFAALYVNTFR--SIP-LVMVLLWFY 77 Query: 244 LHFDKPVLGQFNFIGGSTVSP-EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302 L P L Q N +G S S +S +A S + AA+ +EI+R+G+ ++ RGQ AA+A Sbjct: 78 LIV--PNLVQ-NVLGISPKSDIRLISAMVAFSLFEAAYYSEIIRAGIQSISRGQASAALA 134 Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362 LG+TH + RLV+LPQA +++IP L +Q + L ++SSL + D I + G Sbjct: 135 LGMTHMQTMRLVILPQAFKAMIPLLLTQGIVLFQDSSLVYVLSLTDFFRTATNIGERDGT 194 Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAK 391 +E+IL F+Y +S ++ +N L + Sbjct: 195 QVEMILFAGFVYFIISFGASMLVNYLKKR 223 Score = 38.1 bits (87), Expect = 2.2, Method: Compositional matrix adjust. Identities = 23/79 (29%), Positives = 42/79 (53%), Gaps = 7/79 (8%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G V T + + ++ + GT++ RLS K ++W +YV FR+IP ++V+ + Sbjct: 17 LLDGLVVTAKITITAIVVGILWGTVLAVMRLSTFKPISWFAALYVNTFRSIPLVMVLLWF 76 Query: 149 Y-------KSVLSVLPIPD 160 Y ++VL + P D Sbjct: 77 YLIVPNLVQNVLGISPKSD 95 >gi|23008921|ref|ZP_00050163.1| COG0765: ABC-type amino acid transport system, permease component [Magnetospirillum magnetotacticum MS-1] Length = 209 Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 57/175 (32%), Positives = 100/175 (57%), Gaps = 8/175 (4%) Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGS--TVSPEFMSLYIALSCYTAA 279 LY+ L+ LP +++I + +F P LG + S V P F S I + + AA Sbjct: 39 LYVE--LMRALPLVLVI---FWFYFLMPYLGAWATGAASPIQVGP-FASALITFTLFEAA 92 Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339 + AEI+R+G+ +VP+GQ AA ALG+++ + RLV+LPQA R+++P L +Q + L +++S Sbjct: 93 YFAEIMRAGIQSVPKGQSAAARALGMSYAQTMRLVVLPQAFRNMLPLLLTQTIVLFQDTS 152 Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394 L + D + + + G+ +E+ L +Y ++ +L + RL A+IA+ Sbjct: 153 LVYVLSLTDFLGAASKVAQRDGRLVEMYLFAALVYFAVCFAASLLVRRLQARIAV 207 >gi|152965464|ref|YP_001361248.1| polar amino acid ABC transporter inner membrane protein [Kineococcus radiotolerans SRS30216] gi|151359981|gb|ABS02984.1| polar amino acid ABC transporter, inner membrane subunit [Kineococcus radiotolerans SRS30216] Length = 224 Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 67/183 (36%), Positives = 90/183 (49%), Gaps = 24/183 (13%) Query: 193 SFVLGIVLSLF------ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246 S VLG VL++F A R + + PL I F + LPTL Q+ F Sbjct: 29 SLVLGTVLAVFRISPSAALRAFGTTYVNVFRNTPLTLIMVFCVLCLPTL-------QITF 81 Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306 Q+ +AL YT+ F+ E VRSG+ VP GQ EAA A+GL Sbjct: 82 SDDTARQYRAYA-----------ILALVAYTSCFVCEAVRSGINTVPLGQAEAARAIGLP 130 Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 RLV+LPQA R+++PPL S LLKN+S+A A +LVS ++ Q G A+ Sbjct: 131 FTGVLRLVVLPQAFRAVVPPLGSVLNALLKNTSVASAASNYELVSAMRNLVEQNGNAVIA 190 Query: 367 ILI 369 +LI Sbjct: 191 VLI 193 >gi|163853361|ref|YP_001641404.1| polar amino acid ABC transporter, inner membrane subunit [Methylobacterium extorquens PA1] gi|218532218|ref|YP_002423034.1| polar amino acid ABC transporter inner membrane subunit [Methylobacterium chloromethanicum CM4] gi|163664966|gb|ABY32333.1| polar amino acid ABC transporter, inner membrane subunit [Methylobacterium extorquens PA1] gi|218524521|gb|ACK85106.1| polar amino acid ABC transporter, inner membrane subunit [Methylobacterium chloromethanicum CM4] Length = 240 Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 67/211 (31%), Positives = 110/211 (52%), Gaps = 12/211 (5%) Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249 + +F LG V+ + R +T A+ Y+ F +P LV + L Y F P Sbjct: 40 WAIAFTLGSVVGVM-----RTLPSRTANAIGAAYVEGFR--NVPLLVQMFLWY---FVLP 89 Query: 250 VLGQFNFIGGSTVSPE--FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307 L P+ F + + L +TAA +AE VR+G+ A+PRGQ +A +ALGLT Sbjct: 90 ELLPARLGSAVKQMPDAPFYTAVLCLGFFTAARVAEQVRAGIRALPRGQAQAGLALGLTW 149 Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367 + R VLLP A R I+PPLTS++LN LKN+S+A+ +G +L + ++ + Q E Sbjct: 150 AQTYRAVLLPNAYRIILPPLTSEFLNNLKNTSVALTIGLLELTARARSMQEFSFQVFEAF 209 Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 +Y++L++++ L ++A+ + Sbjct: 210 TAATLLYVALNLVVIAGATLLERRVAVPGGR 240 Score = 37.4 bits (85), Expect = 4.7, Method: Compositional matrix adjust. Identities = 32/104 (30%), Positives = 46/104 (44%), Gaps = 12/104 (11%) Query: 83 SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142 +YA +L G T A A +G++VG R ++ I YVE FRN+P L Sbjct: 19 GTYADMLLSGLAWTVVTALCSWAIAFTLGSVVGVMRTLPSRTANAIGAAYVEGFRNVPLL 78 Query: 143 VVIFFLYKSVLSVLP---------IPD---HSIVLPFGMFLNNR 174 V +F Y + +LP +PD ++ VL G F R Sbjct: 79 VQMFLWYFVLPELLPARLGSAVKQMPDAPFYTAVLCLGFFTAAR 122 >gi|33601620|ref|NP_889180.1| glutamine transport system permease [Bordetella bronchiseptica RB50] gi|33576057|emb|CAE33136.1| glutamine transport system permease [Bordetella bronchiseptica RB50] Length = 222 Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 46/129 (35%), Positives = 81/129 (62%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P F + L Y+ A+++EIVR + +V RGQMEAA +LG++ +A R+++LPQA+ + Sbjct: 87 PAFACGVLGLGIYSGAYVSEIVRGAIQSVDRGQMEAARSLGMSSAQAMRIIILPQAVVRM 146 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 IPPL ++++ L+KNS+L + DL+ G II+ + +++E L+ IYL L+ Sbjct: 147 IPPLGNEFIALIKNSALVSLLTIHDLMHEGQKIISVSYRSLETYLVVALIYLVLTTATTT 206 Query: 384 FMNRLNAKI 392 + R+ ++ Sbjct: 207 ILRRIEHRL 215 Score = 37.4 bits (85), Expect = 3.8, Method: Compositional matrix adjust. Identities = 26/80 (32%), Positives = 39/80 (48%), Gaps = 7/80 (8%) Query: 88 AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAW-ICRVYVEVFRNIPPLVVIF 146 A+L G V T + ++ +IG LVG GRL+ + + +C VY+ FR P LV +F Sbjct: 14 ALLRGAVVTVEVTACALLLGCVIGLLVGVGRLNPQRRFIYNLCSVYLLFFRGTPLLVQLF 73 Query: 147 FLYKSVLSVLPIPDHSIVLP 166 + +P I LP Sbjct: 74 IWF------FGLPQFGITLP 87 >gi|293364950|ref|ZP_06611667.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus oralis ATCC 35037] gi|307703201|ref|ZP_07640147.1| binding-protein-dependent transport system inner membrane component family protein [Streptococcus oralis ATCC 35037] gi|291316400|gb|EFE56836.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus oralis ATCC 35037] gi|307623276|gb|EFO02267.1| binding-protein-dependent transport system inner membrane component family protein [Streptococcus oralis ATCC 35037] Length = 225 Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 74/238 (31%), Positives = 114/238 (47%), Gaps = 43/238 (18%) Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFAT----------RLSRHFHEKTG 216 FG F N G F TL + + F+ + VLGI +T R+ F++ T Sbjct: 14 FGQFFN--GFLF-TLALAVGS--FILAMVLGIFFGAMSTSKRPLLRVLARIFVEFYQNT- 67 Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 PLL + +GLP + D ++ P + + + + Y Sbjct: 68 ---PLLVQFVIVFYGLPLIS----------DHTIM-----------IPIYWTAVLCVGLY 103 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 A+IAE++RSG+ ++P GQMEAA++ G T+ A RL++LPQA R I+PPLT+Q +NL+K Sbjct: 104 HGAYIAEVIRSGIQSIPSGQMEAALSQGFTYISAMRLIILPQAFRIILPPLTNQIVNLIK 163 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF---MNRLNAK 391 N+S + DL+ V + G I L +Y +L +A F M + N K Sbjct: 164 NTSTVAIISGVDLMFVTKSWSALNGNYIPAFLGAALLYFALCFPVAQFGRKMEQANKK 221 Score = 38.5 bits (88), Expect = 1.7, Method: Compositional matrix adjust. Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 5/76 (6%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151 GF+ T LA I A ++G GA S L+ + R++VE ++N P LV ++ Sbjct: 20 GFLFTLALAVGSFILAMVLGIFFGAMSTSKRPLLRVLARIFVEFYQNTPLLVQFVIVFYG 79 Query: 152 VLSVLP-IPDHSIVLP 166 LP I DH+I++P Sbjct: 80 ----LPLISDHTIMIP 91 >gi|116495483|ref|YP_807217.1| ABC-type amino acid transport system, permease component [Lactobacillus casei ATCC 334] gi|191638946|ref|YP_001988112.1| Glutamine ABC transporter permease [Lactobacillus casei BL23] gi|227534090|ref|ZP_03964139.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|239629875|ref|ZP_04672906.1| ABC-type amino acid transport system protein [Lactobacillus paracasei subsp. paracasei 8700:2] gi|116105633|gb|ABJ70775.1| amino acid ABC transporter membrane protein 1, PAAT family [Lactobacillus casei ATCC 334] gi|190713248|emb|CAQ67254.1| Glutamine ABC transporter permease [Lactobacillus casei BL23] gi|227188271|gb|EEI68338.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|239527487|gb|EEQ66488.1| ABC-type amino acid transport system protein [Lactobacillus paracasei subsp. paracasei 8700:2] gi|327382994|gb|AEA54470.1| Arginine/histidine ABC superfamily ATP binding cassette transporter permease [Lactobacillus casei LC2W] gi|327386182|gb|AEA57656.1| Arginine/histidine ABC superfamily ATP binding cassette transporter permease [Lactobacillus casei BD-II] Length = 214 Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 54/122 (44%), Positives = 76/122 (62%), Gaps = 2/122 (1%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I L YT+AFIAE VR+G+ AVP GQME A ++G+T+ +A ++ PQA + +IPPL +Q Sbjct: 90 IGLLIYTSAFIAETVRAGIEAVPGGQMEGARSIGMTYNQAMIQIIFPQAFKMVIPPLGNQ 149 Query: 331 YLNLLKNSS-LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 ++NL+KNSS LA GF DL+ G I T + LI YL L++ ++ M L Sbjct: 150 FINLVKNSSVLAFVAGF-DLMYQGKLIAATTFSTFDTYLIVGVFYLVLTMPLSYLMRYLE 208 Query: 390 AK 391 K Sbjct: 209 KK 210 >gi|110804698|ref|YP_688218.1| glutamate/aspartate transport system permease [Shigella flexneri 5 str. 8401] gi|110614246|gb|ABF02913.1| glutamate/aspartate transport system permease [Shigella flexneri 5 str. 8401] Length = 224 Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 45/129 (34%), Positives = 82/129 (63%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 +S +A S + AA+ +EI+R+G+ ++ RGQ AA+ALG+TH ++ +L++LPQA R+++ Sbjct: 96 RLISAMVAFSMFEAAYYSEIIRAGIQSISRGQSSAALALGMTHWQSMKLIILPQAFRAMV 155 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 P L +Q + L +++SL + AD + TI + G +E+IL F+Y +S+ +L Sbjct: 156 PLLLTQGIVLFQDTSLVYVLSLADFLPYRSTIGERDGTQVEMILFAGFVYFVISLSASLL 215 Query: 385 MNRLNAKIA 393 ++ L + A Sbjct: 216 VSYLKRRTA 224 Score = 39.7 bits (91), Expect = 0.77, Method: Compositional matrix adjust. Identities = 28/92 (30%), Positives = 49/92 (53%), Gaps = 10/92 (10%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G V T + + ++ + GT++ RLS+ V+W + YV VFR+IP ++V+ + Sbjct: 16 LLDGLVITLKITVTAVVIGILWGTMLAVMRLSSFAPVSWFAKAYVNVFRSIPLVMVLLWF 75 Query: 149 Y-------KSVLSVLPIPD---HSIVLPFGMF 170 Y ++VL + P D S ++ F MF Sbjct: 76 YLIVPGFLQNVLGLSPKNDIRLISAMVAFSMF 107 >gi|86359544|ref|YP_471436.1| putative amino acid ABC transporter, permease protein [Rhizobium etli CFN 42] gi|86283646|gb|ABC92709.1| putative amino acid ABC transporter, permease protein [Rhizobium etli CFN 42] Length = 272 Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 49/128 (38%), Positives = 82/128 (64%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IAL ++FIAEI R+G +V GQ+EAA +LGL+ + RLV+ PQA+R I PPL++ Sbjct: 145 IALMIGYSSFIAEIFRAGFQSVDIGQIEAAKSLGLSRYRRFRLVVFPQAIRVIFPPLSND 204 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 +++++K+SSL +G AD+ +G + + + E I +IYL L+I ++LF+ R+ Sbjct: 205 FVSMVKDSSLVSVLGVADITQMGKVYASGSFRFFETYSIVTYIYLILTIGLSLFLRRIEK 264 Query: 391 KIALKEKK 398 K+ ++ Sbjct: 265 KMKQMPRR 272 >gi|312863094|ref|ZP_07723332.1| lysine-arginine-ornithine-binding periplasmic protein [Streptococcus vestibularis F0396] gi|311100630|gb|EFQ58835.1| lysine-arginine-ornithine-binding periplasmic protein [Streptococcus vestibularis F0396] Length = 732 Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 54/176 (30%), Positives = 94/176 (53%), Gaps = 17/176 (9%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 + +PL+ ++ F+ +G+P L+ N G + +F++ IALS Sbjct: 573 RGIPLMIVAAFIYWGIPNLIE-----------------NITGHQSPINDFVAATIALSLN 615 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 A+IAEIVR G+ AVP GQMEA+ +LG+ + R V+LPQA+R ++P +Q++ LK Sbjct: 616 GGAYIAEIVRGGIEAVPIGQMEASRSLGVPYNTTMRKVILPQAVRLMLPNFINQFVISLK 675 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 ++++ A+G +L G II + Q+ + I +YL + + RL ++ Sbjct: 676 DTTIVSAIGLVELFQTGKIIIARNYQSFRMYAILAILYLVIITCLTKLAKRLEKRL 731 >gi|238750306|ref|ZP_04611808.1| Binding-protein-dependent transport system inner membrane component [Yersinia rohdei ATCC 43380] gi|238711539|gb|EEQ03755.1| Binding-protein-dependent transport system inner membrane component [Yersinia rohdei ATCC 43380] Length = 203 Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 50/145 (34%), Positives = 88/145 (60%), Gaps = 2/145 (1%) Query: 253 QFNFIGGSTVSP--EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 + N+ G + P EF++ +I L+ Y+ AFIAE +R+G+ V +GQ AA ALGLT ++ Sbjct: 57 EINWFGVNLSWPSFEFLAGFIGLTLYSTAFIAEELRAGISGVAKGQKYAAHALGLTGWQS 116 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370 R V+LPQA++ +PPL QY+N++KNSSL +A+G A+L + +T + + + Sbjct: 117 MRYVVLPQALKIALPPLLGQYMNIIKNSSLTMAIGVAELSYASRQVETETLRTFQAFGVA 176 Query: 371 MFIYLSLSIMIALFMNRLNAKIALK 395 +Y+++ +I + + A++ Sbjct: 177 TLLYIAIIALIEAWGMWRQQRTAIR 201 >gi|78356476|ref|YP_387925.1| amino acid ABC transporter permease [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78218881|gb|ABB38230.1| amino acid ABC transporter membrane protein 2, PAAT family [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 230 Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 53/135 (39%), Positives = 81/135 (60%), Gaps = 6/135 (4%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 PE I +T+A+IAEIVR+G++A+P+GQMEAA GLT +A R V+LPQA+R++ Sbjct: 94 PEVECALITFVVFTSAYIAEIVRAGVLALPQGQMEAARGTGLTKLQAMRFVILPQALRNM 153 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 IP +Q+++L K++SLA +G A+L + N+T A M IY ++ +M L Sbjct: 154 IPSFVNQFVSLTKDTSLAYVIGVAELTRAAVQVNNRTLSAP------MEIYFTILVMYFL 207 Query: 384 FMNRLNAKIALKEKK 398 L + EK+ Sbjct: 208 ICYALTSASRRLEKQ 222 >gi|328884996|emb|CCA58235.1| ABC-type amino acid transport system, permease component [Streptomyces venezuelae ATCC 10712] Length = 316 Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 74/209 (35%), Positives = 111/209 (53%), Gaps = 9/209 (4%) Query: 189 IFVFSFVLGIVLSL-FAT-RLSRHFHEKTGKALPLLYISTFLIFGLPTLV--LIALKYQL 244 I V S LG+VL + FA RLS++ TG A+ LYI + G P V L+ L Sbjct: 83 ISVSSMALGLVLGIVFAVMRLSKN--PVTG-AVAWLYI--WFFRGTPVYVQLLVWFNLSL 137 Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304 F+ LG V FM + L A++AEIVR+G+ +V GQ EAA ALG Sbjct: 138 IFEYINLGPIYKNETVDVMTPFMVALLGLGLNEGAYMAEIVRAGIQSVDEGQTEAAHALG 197 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364 ++ K V+LPQAMR I+PP ++++N+LK SSL AV + +L+ I + G + Sbjct: 198 MSQTKTMGRVVLPQAMRVIVPPTGNEFINMLKTSSLVSAVQYTELLRASSNIGSTAGAVM 257 Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIA 393 E++ + YL+L+ + ++ L + A Sbjct: 258 EMLFVASIWYLALTSVFSVGQYYLERRFA 286 >gi|221231431|ref|YP_002510583.1| putative amino acid ABC transporter, permease protein [Streptococcus pneumoniae ATCC 700669] gi|298229829|ref|ZP_06963510.1| putative amino acid ABC transporter, permease protein [Streptococcus pneumoniae str. Canada MDR_19F] gi|298255469|ref|ZP_06979055.1| putative amino acid ABC transporter, permease protein [Streptococcus pneumoniae str. Canada MDR_19A] gi|298502400|ref|YP_003724340.1| amino acid ABC superfamily transporter membrane protein [Streptococcus pneumoniae TCH8431/19A] gi|220673891|emb|CAR68397.1| putative amino acid ABC transporter, permease protein [Streptococcus pneumoniae ATCC 700669] gi|298237995|gb|ADI69126.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus pneumoniae TCH8431/19A] Length = 225 Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 72/234 (30%), Positives = 110/234 (47%), Gaps = 35/234 (14%) Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFAT------RLSRHFHEKTGKALP 220 FG F N G F T+ F+ + VLGI +T R+ H + + P Sbjct: 14 FGQFFN--GFLF---TLALAIGFFILAMVLGIFFGAMSTSKRPILRILAHIFVEFYQNTP 68 Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280 LL + +GLP + D ++ P + + + + Y A+ Sbjct: 69 LLVQFVIVFYGLPLIS----------DHTIM-----------IPIYWTAVLCVGLYHGAY 107 Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340 IAE++RSG+ ++P GQMEAA++ G T+ A RL+ LPQA R I+PPLT+Q +NL+KN+S Sbjct: 108 IAEVIRSGIQSIPSGQMEAALSQGFTYISAMRLITLPQAFRIILPPLTNQIVNLIKNTST 167 Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF---MNRLNAK 391 + DL+ V + G I L +Y +L +A F M + N K Sbjct: 168 VAIISGVDLMFVTKSWSALNGNYIPAFLGAALLYFALCFPVAQFGRKMEQANKK 221 >gi|320177112|gb|EFW52128.1| Glutamate Aspartate transport system permease protein GltJ [Shigella dysenteriae CDC 74-1112] gi|320184057|gb|EFW58877.1| Glutamate Aspartate transport system permease protein GltJ [Shigella flexneri CDC 796-83] gi|323165234|gb|EFZ51024.1| general L-amino acid transport system permease aapQ domain protein [Shigella sonnei 53G] gi|332098836|gb|EGJ03793.1| general L-amino acid transport system permease protein aapQ domain protein [Shigella boydii 3594-74] Length = 77 Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 45/76 (59%), Positives = 61/76 (80%), Gaps = 1/76 (1%) Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMI 381 IIPPLTSQYLN++KNSSLA A+G+ D+VS+ GT++NQTGQAIE I + M +YL +S+ I Sbjct: 2 IIPPLTSQYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAMTMSVYLIISLTI 61 Query: 382 ALFMNRLNAKIALKEK 397 +L MN N +IA+ E+ Sbjct: 62 SLLMNIYNRRIAIVER 77 >gi|239817009|ref|YP_002945919.1| polar amino acid ABC transporter inner membrane subunit [Variovorax paradoxus S110] gi|239803586|gb|ACS20653.1| polar amino acid ABC transporter, inner membrane subunit [Variovorax paradoxus S110] Length = 231 Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 62/165 (37%), Positives = 91/165 (55%), Gaps = 15/165 (9%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 + +PLL F FG P L+ +K Q+ + G E S IALS Y Sbjct: 66 RNIPLLAHMLFWYFGAPELLPEGIK-----------QWLYAGHI----EAYSAIIALSLY 110 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 TAAF+AE +RSG+ A+P Q+EA ALG + R V+LPQA+R +PPL SQ L+L K Sbjct: 111 TAAFMAEDIRSGIRAIPTVQLEAGRALGFSFLGTMRRVVLPQALRVTVPPLISQTLSLWK 170 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 N+S+A +G A+L+ G + + + ++ E YL++S+ I Sbjct: 171 NTSIATVIGVAELMYQAGQVESASFRSFESFAFASAAYLTVSLAI 215 >gi|145298730|ref|YP_001141571.1| ABC-type amino acid transporter, permease protein [Aeromonas salmonicida subsp. salmonicida A449] gi|142851502|gb|ABO89823.1| ABC-type amino acid transporter, permease protein [Aeromonas salmonicida subsp. salmonicida A449] Length = 300 Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 50/115 (43%), Positives = 76/115 (66%) Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 +AAF+AEIVR+GL AVP+GQ EAA +LGL+ R R V+LPQAM ++PPLT Q + L+K Sbjct: 182 SAAFVAEIVRAGLAAVPKGQWEAAQSLGLSPRVRLRRVILPQAMLLMLPPLTGQLIALVK 241 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 ++++ + +L VG + N +G EI L+ YL + + + + ++RL AK Sbjct: 242 DTAIVSLISVQELTFVGTEMANSSGLVYEIWLLVAAAYLLICLSLFVLLSRLEAK 296 >gi|160895808|ref|YP_001561390.1| polar amino acid ABC transporter inner membrane protein [Delftia acidovorans SPH-1] gi|160361392|gb|ABX33005.1| polar amino acid ABC transporter, inner membrane subunit [Delftia acidovorans SPH-1] Length = 260 Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 67/171 (39%), Positives = 95/171 (55%), Gaps = 12/171 (7%) Query: 214 KTGKALPLLYISTFLIF---GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY 270 +T + L + + F ++ G P LV I Y F PVL I G + P+F + Sbjct: 81 RTSRTAALRWAAGFYVWAIRGTPLLVQILFIY---FALPVL-----IPGLNL-PDFAAAC 131 Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IAL+ A+ AE VR+GL AVPRGQ EAA ALGL V+ PQA + +PPL S Sbjct: 132 IALALNVGAYNAEAVRAGLQAVPRGQAEAARALGLPRICVFMDVVFPQAFKISLPPLVSN 191 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 ++ LLK+SSLA A+G +L +VG I + T Q +E ++ YL L+ ++ Sbjct: 192 FVALLKDSSLAYAIGVVELTNVGNRIQSATFQPVETLVTVGVTYLVLTTLV 242 >gi|306829073|ref|ZP_07462263.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus mitis ATCC 6249] gi|304428159|gb|EFM31249.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus mitis ATCC 6249] Length = 225 Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 74/239 (30%), Positives = 114/239 (47%), Gaps = 45/239 (18%) Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFAT----------RLSRHFHEKTG 216 FG F N G F TL + + F+ + LGI+ + +T R+ F++ T Sbjct: 14 FGQFFN--GFLF-TLALAIGS--FILAMALGIIFGVLSTSKHQILRILARIFVEFYQNT- 67 Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVS-PEFMSLYIALSC 275 PLL + +GLP I T+ P + + + + Sbjct: 68 ---PLLVQFVIVFYGLP----------------------LISEHTIMIPIYWTAVLCVGL 102 Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335 Y A+IAE++RSG+ ++P GQMEAA++ G T+ A RL++LPQA R I+PPLT+Q +NL+ Sbjct: 103 YHGAYIAEVIRSGIQSIPSGQMEAALSQGFTYISAMRLIILPQAFRIILPPLTNQIVNLI 162 Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF---MNRLNAK 391 KN+S + DL+ V + G I L +Y +L +A F M + N K Sbjct: 163 KNTSTVAIISGVDLMFVTKSWSALNGNYIPAFLGAALLYFALCFPVAQFGRKMEQANKK 221 >gi|229541936|ref|ZP_04430996.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus coagulans 36D1] gi|229326356|gb|EEN92031.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus coagulans 36D1] Length = 235 Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 63/216 (29%), Positives = 117/216 (54%), Gaps = 21/216 (9%) Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239 +T++ V SF++G +L + + K P++ + + LP +++I Sbjct: 20 AVTLEVAFVAIVLSFLIGCILGILR-------YAKIPILSPIVALVVEITRNLPLILIIF 72 Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299 Y F P +G + + +S AL+ + +A IAEIVR GL A+P+GQ+EA Sbjct: 73 FTY---FALPEVGMKMSVTAAAIS--------ALTVFESAMIAEIVRGGLNAIPKGQIEA 121 Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359 A + GL + + ++LPQA++ +IPPL SQ+++LLK++SLA+ + +L+ I N Sbjct: 122 ARSSGLKYIQTLWYIILPQALKKMIPPLVSQFISLLKDTSLAIIIALPELLHNAKGIYNG 181 Query: 360 TGQA---IEIILIWMFIYLSLSIMIALFMNRLNAKI 392 G + I I+L+ F+Y ++ ++++ RL ++ Sbjct: 182 EGGSKYIIPILLMAAFMYFVVNYLLSILARRLEKRL 217 Score = 37.7 bits (86), Expect = 3.4, Method: Compositional matrix adjust. Identities = 20/61 (32%), Positives = 38/61 (62%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L GF T +AF ++ + +IG ++G R + +++ I + VE+ RN+P +++IFF Sbjct: 15 LLKGFAVTLEVAFVAIVLSFLIGCILGILRYAKIPILSPIVALVVEITRNLPLILIIFFT 74 Query: 149 Y 149 Y Sbjct: 75 Y 75 >gi|161524793|ref|YP_001579805.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia multivorans ATCC 17616] gi|189350453|ref|YP_001946081.1| polar amino acid transporter permease [Burkholderia multivorans ATCC 17616] gi|160342222|gb|ABX15308.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia multivorans ATCC 17616] gi|189334475|dbj|BAG43545.1| polar amino acid transport system permease protein [Burkholderia multivorans ATCC 17616] Length = 240 Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 46/85 (54%), Positives = 63/85 (74%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 EF++ ++ LS YTAAF+AE +GL V R Q +AA ALGLT ++ R V+LPQA+R + Sbjct: 106 EFVAGWVGLSAYTAAFVAEECEAGLRGVRRAQHDAAAALGLTPLQSLRYVVLPQAVRIAL 165 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADL 349 PPL Q +NL+KNSSLA+A+G A+L Sbjct: 166 PPLFGQIMNLVKNSSLAMAIGVAEL 190 >gi|221065074|ref|ZP_03541179.1| polar amino acid ABC transporter, inner membrane subunit [Comamonas testosteroni KF-1] gi|220710097|gb|EED65465.1| polar amino acid ABC transporter, inner membrane subunit [Comamonas testosteroni KF-1] Length = 250 Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 55/134 (41%), Positives = 79/134 (58%), Gaps = 4/134 (2%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P F+ + A+ +T+A IAE VRSG+ A+PRGQ A +A+G T + R VLLP A R I Sbjct: 109 PGFVLVVFAIGFFTSARIAEQVRSGIQALPRGQRYAGMAVGFTTFQTYRYVLLPMAFRII 168 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 IPPLTS+ +N+ KNSS+A AV A+L +T + +EI L L ++ A Sbjct: 169 IPPLTSEAMNVFKNSSVAFAVSVAELTMFAMQAQEETARGVEIYL----AVTGLYVISAF 224 Query: 384 FMNRLNAKIALKEK 397 +NR+ A I + + Sbjct: 225 IINRIMAFIEKRSR 238 Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust. Identities = 25/90 (27%), Positives = 47/90 (52%), Gaps = 5/90 (5%) Query: 71 EIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICR 130 E+ Q D +Y ++ + T +A ++ A ++G ++G R ++ WI R Sbjct: 16 EVGQSCFGKNGDITYLDWMMSAWGWTVAVALLSLVIALVLGAVIGTLRTLPDR--PWIVR 73 Query: 131 V---YVEVFRNIPPLVVIFFLYKSVLSVLP 157 + +VE+FRNIP LV +F Y + +++P Sbjct: 74 LGNAWVELFRNIPLLVQVFIWYHVIPAMVP 103 >gi|317153613|ref|YP_004121661.1| polar amino acid ABC transporter inner membrane subunit [Desulfovibrio aespoeensis Aspo-2] gi|316943864|gb|ADU62915.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio aespoeensis Aspo-2] Length = 588 Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 47/133 (35%), Positives = 81/133 (60%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 EF + I +T AF+AEI+R+G+ ++P+G +EA+ + GL + R ++LP + R II Sbjct: 136 EFWTATIGCGIFTGAFMAEIIRAGIQSIPKGLLEASYSSGLNFSQTLRKIILPLSFREII 195 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 PPL S++LN +KN+SLA+ +G A+L + + T E + + +Y LS+ IA Sbjct: 196 PPLGSEFLNNMKNTSLAMTIGVAELCWSMQEVYSLTYHTFEAMTVATAVYSCLSLSIAGI 255 Query: 385 MNRLNAKIALKEK 397 +N +N ++ + K Sbjct: 256 LNLVNIRLKILPK 268 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 42/129 (32%), Positives = 71/129 (55%), Gaps = 1/129 (0%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IAL+ + AA+IAE VR G+ +P GQ+EAA A GL + + R ++LPQA++ ++P L Sbjct: 457 IALTFFFAAYIAETVRGGIENIPVGQVEAATASGLGYFQIMRKIILPQALKQMLPALVGM 516 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTG-QAIEIILIWMFIYLSLSIMIALFMNRLN 389 ++ K++SL +G +L I N+ EI +Y S +++ + RL Sbjct: 517 FIAAFKDTSLVYIIGVTELTRAAYAINNRIMIYPFEIFTTVAMLYFVPSYLMSQYAKRLE 576 Query: 390 AKIALKEKK 398 K++ + K Sbjct: 577 RKLSPENVK 585 Score = 41.6 bits (96), Expect = 0.24, Method: Compositional matrix adjust. Identities = 19/38 (50%), Positives = 25/38 (65%) Query: 110 IGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147 +GT+ G RLS+ K V W YVE+FRN P L+ +FF Sbjct: 76 LGTIFGLARLSSFKPVYWFATSYVELFRNTPLLIQLFF 113 >gi|157369455|ref|YP_001477444.1| polar amino acid ABC transporter inner membrane subunit [Serratia proteamaculans 568] gi|157321219|gb|ABV40316.1| polar amino acid ABC transporter, inner membrane subunit [Serratia proteamaculans 568] Length = 224 Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 44/127 (34%), Positives = 80/127 (62%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 +S +A S + AA+ +EI+R+G+I++ RGQ AA+ALG++H ++ +LV+LPQA R+++ Sbjct: 96 RLISAMVAFSLFEAAYYSEIIRAGIISISRGQSSAALALGMSHWQSMKLVILPQAFRAMV 155 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 P L +Q + L +++SL + AD TI + G +E+IL F+Y +S+ + Sbjct: 156 PLLLTQGIVLFQDTSLVYVLSLADFFRTASTIGERDGTQVEMILFAGFVYFVISLAASAL 215 Query: 385 MNRLNAK 391 ++ L + Sbjct: 216 VSYLKKR 222 Score = 37.0 bits (84), Expect = 5.3, Method: Compositional matrix adjust. Identities = 20/68 (29%), Positives = 40/68 (58%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G + T + + ++ + GT++ RLS K ++W +YV +FR++P ++V+ + Sbjct: 16 LLQGLLITLKITVTAIVFGILWGTILAVMRLSPFKPISWFAALYVNLFRSVPLVMVLLWF 75 Query: 149 YKSVLSVL 156 Y V S+L Sbjct: 76 YLVVPSLL 83 >gi|73748260|ref|YP_307499.1| amino acid ABC transporter, permease protein [Dehalococcoides sp. CBDB1] gi|289432311|ref|YP_003462184.1| polar amino acid ABC transporter inner membrane protein [Dehalococcoides sp. GT] gi|73659976|emb|CAI82583.1| amino acid ABC transporter, permease protein [Dehalococcoides sp. CBDB1] gi|288946031|gb|ADC73728.1| polar amino acid ABC transporter, inner membrane subunit [Dehalococcoides sp. GT] Length = 273 Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 53/153 (34%), Positives = 92/153 (60%), Gaps = 14/153 (9%) Query: 224 ISTF---LIFGLPTLVLIALKYQLHFDKPVLGQ-------FNFIGGSTVSPEFMSLYIAL 273 I+TF ++ G+P LV + Y F PV+ Q F + +P M+++ Sbjct: 95 IATFYVEIVRGIPLLVQLIWWY---FAFPVIIQTIGQALNFGPMLNYQANPIVMAIWGMT 151 Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333 CY A+++EI R+G+ ++P+GQMEAA +LG++H +A R ++LPQA+R ++PP+ +++++ Sbjct: 152 FCY-GAYMSEIYRAGIQSIPKGQMEAARSLGMSHTQAMRFIILPQALRVVLPPMGNEFIS 210 Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 LLK++SL V AD+V +G IE+ Sbjct: 211 LLKDTSLVSTVAVADMVRLGREFTATNFNPIEV 243 >gi|302536847|ref|ZP_07289189.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Streptomyces sp. C] gi|302445742|gb|EFL17558.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Streptomyces sp. C] Length = 315 Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 50/134 (37%), Positives = 81/134 (60%), Gaps = 3/134 (2%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 FM + L A++AEIVR+G+ +V GQ EA+ ALG+T + R V+LPQAMR IIP Sbjct: 159 FMVALLGLGLNEGAYMAEIVRAGIQSVDEGQTEASHALGMTQTQTMRRVVLPQAMRVIIP 218 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL-- 383 P ++++N+LK SSL AV + +L+ I + G IE+ + YL+L+ + ++ Sbjct: 219 PTGNEFINMLKTSSLVSAVQYTELLRASSNIGSTAGAVIEMYFVASIWYLALTSVFSVGQ 278 Query: 384 -FMNRLNAKIALKE 396 ++ R A+ +L+ Sbjct: 279 YYLERRYARGSLRS 292 >gi|154686885|ref|YP_001422046.1| GlnM [Bacillus amyloliquefaciens FZB42] gi|154352736|gb|ABS74815.1| GlnM [Bacillus amyloliquefaciens FZB42] Length = 216 Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 56/130 (43%), Positives = 81/130 (62%), Gaps = 8/130 (6%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + IAL+ YT+AFIAE +R+G+ V +GQMEAA + G T+ +A R V+LPQA++ +IP Sbjct: 86 FQAGTIALTIYTSAFIAEAIRAGIQTVSKGQMEAARSSGFTYSQAMRYVILPQAVKIVIP 145 Query: 326 PLTSQYLNLLKNSS-LAVAVGF-----ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379 PL +Q+LNL+KNSS L V G ADLVS ++ I + L ++ + + LSI Sbjct: 146 PLGNQFLNLVKNSSILGVVAGLDLMYQADLVSSSTLVVFDV--YIFVALFYLIVTIPLSI 203 Query: 380 MIALFMNRLN 389 + RL Sbjct: 204 GVHYLERRLG 213 Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust. Identities = 21/58 (36%), Positives = 33/58 (56%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 GF++T +F + + +G L+ R++A K + WI YVE RNIP L++ F Y Sbjct: 16 GFLHTLLASFIALAGSFALGVLIAVMRITAFKPLQWIGTAYVEFIRNIPLLLITFVFY 73 >gi|49078488|gb|AAT49790.1| PA1340 [synthetic construct] Length = 223 Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 63/203 (31%), Positives = 102/203 (50%), Gaps = 23/203 (11%) Query: 196 LGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249 LG VL+L S+ G +++PLL + T+ F +P + L++ D P Sbjct: 35 LGTVLALMRLSHSKLLSNIAGFYVNYFRSIPLLLVITWFYFAVPFI----LRWITGEDTP 90 Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309 V F S +A + AA+ EIVR+G+ A+P+GQM AA ALG+T+ + Sbjct: 91 V-------------GAFTSCLVAFMMFEAAYYCEIVRAGIQAIPKGQMGAAQALGMTYGQ 137 Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369 RLV+LPQA R + P L Q + L +++SL VG D ++ + + GQA E ++ Sbjct: 138 TMRLVILPQAFRKMTPLLLQQSIILFQDTSLVYTVGLMDFLNSARSRGDIIGQANEFLIF 197 Query: 370 WMFIYLSLSIMIALFMNRLNAKI 392 +Y +S + + RL ++ Sbjct: 198 AGLVYFVVSFTASFAVKRLQKRL 220 Score = 36.2 bits (82), Expect = 8.6, Method: Compositional matrix adjust. Identities = 23/61 (37%), Positives = 36/61 (59%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151 G + T L G++ +GT++ RLS +KL++ I YV FR+IP L+VI + Y + Sbjct: 17 GMLMTLKLMVLGVLGGVALGTVLALMRLSHSKLLSNIAGFYVNYFRSIPLLLVITWFYFA 76 Query: 152 V 152 V Sbjct: 77 V 77 >gi|308186029|ref|YP_003930160.1| glutamate/aspartate transport system permease protein gltK [Pantoea vagans C9-1] gi|308056539|gb|ADO08711.1| Glutamate/aspartate transport system permease protein gltK [Pantoea vagans C9-1] Length = 225 Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 45/127 (35%), Positives = 79/127 (62%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 +S +A S + AA+ +EI+R+G+I++ RGQ AA+ALG+T +A RL++LPQA R+++ Sbjct: 96 RLISAMVAFSLFEAAYYSEIIRAGIISISRGQGNAALALGMTQWQAMRLIILPQAFRAMV 155 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 P L +Q + L +++SL + AD TI + G +E++L +Y +S+ +L Sbjct: 156 PLLLTQGIVLFQDTSLVYVLSLADFFRTASTIGERDGTQVEMVLFAGLVYFVISLSASLL 215 Query: 385 MNRLNAK 391 ++ L K Sbjct: 216 VSYLKRK 222 Score = 44.3 bits (103), Expect = 0.034, Method: Compositional matrix adjust. Identities = 24/68 (35%), Positives = 42/68 (61%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G V TF + + ++ + GTL+ RLS+ K V+W ++YV +FR++P ++V+ + Sbjct: 16 LLNGLVITFKITITAVVFGILWGTLLAVMRLSSFKPVSWFAKIYVNLFRSVPLVMVLLWF 75 Query: 149 YKSVLSVL 156 Y V S L Sbjct: 76 YLVVPSFL 83 >gi|300715837|ref|YP_003740640.1| Glutamate/aspartate transport system permease [Erwinia billingiae Eb661] gi|299061673|emb|CAX58789.1| Glutamate/aspartate transport system permease [Erwinia billingiae Eb661] Length = 246 Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 47/129 (36%), Positives = 77/129 (59%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + L +TAA + E VR+ + ++P GQ A +A+GLT + R VLLP A R I+P Sbjct: 111 FTCSVLCLGLFTAARVCEQVRAAIQSLPSGQKNAGLAMGLTLPQTYRYVLLPNAYRVIVP 170 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 P+TS+ LNL+KNS++A +G D+ + G +++ + A E Y+ ++I+I L M Sbjct: 171 PMTSEMLNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAYESFTAITLAYVGINIVIMLLM 230 Query: 386 NRLNAKIAL 394 + + K+ L Sbjct: 231 SLVERKVRL 239 Score = 42.0 bits (97), Expect = 0.18, Method: Compositional matrix adjust. Identities = 25/76 (32%), Positives = 42/76 (55%) Query: 82 DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141 +++Y + GF T ++ I A ++G+L G R N+L++ + YVE+FRNIP Sbjct: 18 NTTYLGWLWSGFQVTIAVSVCAWIIALLVGSLFGILRTVPNRLLSTLGTCYVELFRNIPL 77 Query: 142 LVVIFFLYKSVLSVLP 157 +V F Y + +LP Sbjct: 78 IVQFFIWYLVIPELLP 93 >gi|225860606|ref|YP_002742115.1| ABC transporter membrane-spanning permease - glutamine transport [Streptococcus pneumoniae Taiwan19F-14] gi|225726892|gb|ACO22743.1| ABC transporter membrane-spanning permease - glutamine transport [Streptococcus pneumoniae Taiwan19F-14] gi|327390343|gb|EGE88684.1| putative ABC-type amino-acid transporter permease protein [Streptococcus pneumoniae GA04375] Length = 225 Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 74/238 (31%), Positives = 115/238 (48%), Gaps = 43/238 (18%) Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFAT----------RLSRHFHEKTG 216 FG F N G F TL + + F+ + VLGI +T R+ F++ T Sbjct: 14 FGQFFN--GFLF-TLALAIGS--FILAMVLGIFFGAMSTSKRPILRILARIFVEFYQNT- 67 Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 PLL + +GLP + D ++ P + + + + Y Sbjct: 68 ---PLLVQFVIVFYGLPLIS----------DHTIM-----------IPIYWTAVLCVGLY 103 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 A+IAE++RSG+ ++P GQMEAA++ G T+ A RL++LPQA R I+PPLT+Q +NL+K Sbjct: 104 HGAYIAEVIRSGIQSIPSGQMEAALSQGFTYISAMRLIILPQAFRIILPPLTNQIVNLIK 163 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF---MNRLNAK 391 N+S + DL+ V + G I L +Y +L +A F M ++N K Sbjct: 164 NTSTVAIISGVDLMFVTKSWSALNGNYIPGFLGAALLYFALCFPVAQFGRKMEQVNKK 221 Score = 38.1 bits (87), Expect = 2.7, Method: Compositional matrix adjust. Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 5/76 (6%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151 GF+ T LA I A ++G GA S ++ + R++VE ++N P LV ++ Sbjct: 20 GFLFTLALAIGSFILAMVLGIFFGAMSTSKRPILRILARIFVEFYQNTPLLVQFVIVFYG 79 Query: 152 VLSVLP-IPDHSIVLP 166 LP I DH+I++P Sbjct: 80 ----LPLISDHTIMIP 91 >gi|107100791|ref|ZP_01364709.1| hypothetical protein PaerPA_01001819 [Pseudomonas aeruginosa PACS2] gi|296390283|ref|ZP_06879758.1| putative permease of ABC transporter [Pseudomonas aeruginosa PAb1] Length = 221 Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 63/203 (31%), Positives = 102/203 (50%), Gaps = 23/203 (11%) Query: 196 LGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249 LG VL+L S+ G +++PLL + T+ F +P + L++ D P Sbjct: 34 LGTVLALMRLSHSKLLSNIAGFYVNYFRSIPLLLVITWFYFAVPFI----LRWITGEDTP 89 Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309 V F S +A + AA+ EIVR+G+ A+P+GQM AA ALG+T+ + Sbjct: 90 V-------------GAFTSCLVAFMMFEAAYYCEIVRAGIQAIPKGQMGAAQALGMTYGQ 136 Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369 RLV+LPQA R + P L Q + L +++SL VG D ++ + + GQA E ++ Sbjct: 137 TMRLVILPQAFRKMTPLLLQQSIILFQDTSLVYTVGLMDFLNSARSRGDIIGQANEFLIF 196 Query: 370 WMFIYLSLSIMIALFMNRLNAKI 392 +Y +S + + RL ++ Sbjct: 197 AGLVYFVVSFTASFAVKRLQKRL 219 Score = 36.2 bits (82), Expect = 8.7, Method: Compositional matrix adjust. Identities = 23/61 (37%), Positives = 36/61 (59%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151 G + T L G++ +GT++ RLS +KL++ I YV FR+IP L+VI + Y + Sbjct: 16 GMLMTLKLMVLGVLGGVALGTVLALMRLSHSKLLSNIAGFYVNYFRSIPLLLVITWFYFA 75 Query: 152 V 152 V Sbjct: 76 V 76 >gi|91780196|ref|YP_555403.1| polar amino acid ABC transporter inner membrane protein [Burkholderia xenovorans LB400] gi|91692856|gb|ABE36053.1| amino acid ABC transporter membrane protein 1, PAAT family [Burkholderia xenovorans LB400] Length = 252 Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 65/178 (36%), Positives = 96/178 (53%), Gaps = 14/178 (7%) Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPT 234 +T+ +A + V + +LG L+L + S + PLL F FG Sbjct: 22 MTLALSASVAVCATLLGFALALARSAPSAALRRAAAGYVLIFRNSPLLVQLLFWYFGAAV 81 Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVS-P--EFMSLYIALSCYTAAFIAEIVRSGLIA 291 L+ L L+ V+ +G T+S P EF++ ++ L+CY+ FI E R+G+ Sbjct: 82 LLPDGLMNWLNTPHVVV-----LGPVTLSWPTFEFVAGWLGLTCYSTTFIGEEFRAGMRG 136 Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349 V GQ +AA ALGLT R V+LPQA+R PPL QY+N++KNSSL +A+GFA+L Sbjct: 137 VRDGQYQAAAALGLTRFATFRHVILPQAVRIATPPLAGQYMNVIKNSSLTMAIGFAEL 194 >gi|224824086|ref|ZP_03697194.1| polar amino acid ABC transporter, inner membrane subunit [Lutiella nitroferrum 2002] gi|224603505|gb|EEG09680.1| polar amino acid ABC transporter, inner membrane subunit [Lutiella nitroferrum 2002] Length = 247 Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 48/132 (36%), Positives = 84/132 (63%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+S +AL+ A+I EI R+G+ ++ +GQMEAA +LGL++ +A + V++PQA R ++P Sbjct: 116 FISGLLALTLNAGAYITEIFRAGIQSIDKGQMEAARSLGLSYGQAMKAVIVPQAFRRMLP 175 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PL ++ + LLK+SSL A+G A+L T+ + E L F+YL+L++++A + Sbjct: 176 PLGNEAIMLLKDSSLVSAIGLAELAFAARTVAGVYSRYWEPYLTISFLYLALTMLMAWGI 235 Query: 386 NRLNAKIALKEK 397 RL + + + Sbjct: 236 GRLEKRFQIASR 247 >gi|15596537|ref|NP_250031.1| amino acid ABC transporter membrane protein [Pseudomonas aeruginosa PAO1] gi|116049292|ref|YP_791905.1| putative permease of ABC transporter [Pseudomonas aeruginosa UCBPP-PA14] gi|218892555|ref|YP_002441424.1| putative permease of ABC transporter [Pseudomonas aeruginosa LESB58] gi|254234459|ref|ZP_04927782.1| hypothetical protein PACG_00311 [Pseudomonas aeruginosa C3719] gi|254239711|ref|ZP_04933033.1| hypothetical protein PA2G_00335 [Pseudomonas aeruginosa 2192] gi|313106331|ref|ZP_07792574.1| LOW QUALITY PROTEIN: putative permease of ABC transporter [Pseudomonas aeruginosa 39016] gi|9947280|gb|AAG04729.1|AE004563_6 amino acid ABC transporter membrane protein [Pseudomonas aeruginosa PAO1] gi|115584513|gb|ABJ10528.1| putative permease of ABC transporter [Pseudomonas aeruginosa UCBPP-PA14] gi|126166390|gb|EAZ51901.1| hypothetical protein PACG_00311 [Pseudomonas aeruginosa C3719] gi|126193089|gb|EAZ57152.1| hypothetical protein PA2G_00335 [Pseudomonas aeruginosa 2192] gi|218772783|emb|CAW28568.1| probable permease of ABC transporter [Pseudomonas aeruginosa LESB58] gi|310879076|gb|EFQ37670.1| LOW QUALITY PROTEIN: putative permease of ABC transporter [Pseudomonas aeruginosa 39016] Length = 222 Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 63/203 (31%), Positives = 102/203 (50%), Gaps = 23/203 (11%) Query: 196 LGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249 LG VL+L S+ G +++PLL + T+ F +P + L++ D P Sbjct: 35 LGTVLALMRLSHSKLLSNIAGFYVNYFRSIPLLLVITWFYFAVPFI----LRWITGEDTP 90 Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309 V F S +A + AA+ EIVR+G+ A+P+GQM AA ALG+T+ + Sbjct: 91 V-------------GAFTSCLVAFMMFEAAYYCEIVRAGIQAIPKGQMGAAQALGMTYGQ 137 Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369 RLV+LPQA R + P L Q + L +++SL VG D ++ + + GQA E ++ Sbjct: 138 TMRLVILPQAFRKMTPLLLQQSIILFQDTSLVYTVGLMDFLNSARSRGDIIGQANEFLIF 197 Query: 370 WMFIYLSLSIMIALFMNRLNAKI 392 +Y +S + + RL ++ Sbjct: 198 AGLVYFVVSFTASFAVKRLQKRL 220 Score = 36.2 bits (82), Expect = 8.6, Method: Compositional matrix adjust. Identities = 23/61 (37%), Positives = 36/61 (59%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151 G + T L G++ +GT++ RLS +KL++ I YV FR+IP L+VI + Y + Sbjct: 17 GMLMTLKLMVLGVLGGVALGTVLALMRLSHSKLLSNIAGFYVNYFRSIPLLLVITWFYFA 76 Query: 152 V 152 V Sbjct: 77 V 77 >gi|241661991|ref|YP_002980351.1| polar amino acid ABC transporter inner membrane subunit [Ralstonia pickettii 12D] gi|240864018|gb|ACS61679.1| polar amino acid ABC transporter, inner membrane subunit [Ralstonia pickettii 12D] Length = 242 Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 45/117 (38%), Positives = 76/117 (64%), Gaps = 2/117 (1%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+ + L +TAA + E VRSG+ ++PRGQ A +A+G T + R V+LP + R I+P Sbjct: 107 FLCAMLCLGTFTAARVCEQVRSGINSLPRGQRNAGLAMGFTLAQTYRYVMLPMSFRIIVP 166 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE--IILIWMFIYLSLSIM 380 PLTS++LN+ KNS++A +G +L + G +++ T Q E I + M++ ++L++M Sbjct: 167 PLTSEFLNIFKNSAVASTIGLLELAAQGRQLVDYTAQPYESFIAVTLMYMLINLTVM 223 Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust. Identities = 28/81 (34%), Positives = 44/81 (54%) Query: 81 SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140 + +Y +L G T L S I A +IG+++G R NK ++ + YVEVFRNIP Sbjct: 16 QNQTYLDWLLAGLKTTVVLGLSSWIIALVIGSVLGVLRTVPNKWLSGLAAAYVEVFRNIP 75 Query: 141 PLVVIFFLYKSVLSVLPIPDH 161 +V +F Y + ++P D+ Sbjct: 76 LIVQLFIWYFVMPELVPGGDY 96 >gi|330813244|ref|YP_004357483.1| putative amino acid ABC transporter, permease protein [Candidatus Pelagibacter sp. IMCC9063] gi|327486339|gb|AEA80744.1| putative amino acid ABC transporter, permease protein [Candidatus Pelagibacter sp. IMCC9063] Length = 239 Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 64/205 (31%), Positives = 111/205 (54%), Gaps = 29/205 (14%) Query: 191 VFSFVLGIVLSLFATRLSRH------FHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244 V + V+G+++++ A +++ F+ + +++PLL + ++ +GLP L Sbjct: 56 VIAMVVGLLIAIPAITKNKYLSYVNVFYVEVVRSVPLLVLILWVYYGLPILT-------- 107 Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304 G + SP F+S IALS +AF+AEI R G+ A+ + Q EAA +LG Sbjct: 108 --------------GLSFSP-FVSGIIALSISESAFMAEIFRGGINAIKKTQWEAATSLG 152 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364 L K +LV+LPQA + I+P L +Q++ +LK SSL +G +DL ++ T + + Sbjct: 153 LNFSKKLKLVILPQAFKVILPALGNQFVYVLKMSSLVSIIGISDLTRKANELVVSTYRPL 212 Query: 365 EIILIWMFIYLSLSIMIALFMNRLN 389 EI + YL L ++++ F+ RL Sbjct: 213 EIYTFLILEYLVLILIVSYFVRRLE 237 >gi|182435042|ref|YP_001822761.1| putative glutamate ABC transporter permease protein [Streptomyces griseus subsp. griseus NBRC 13350] gi|326775558|ref|ZP_08234823.1| polar amino acid ABC transporter, inner membrane subunit [Streptomyces cf. griseus XylebKG-1] gi|178463558|dbj|BAG18078.1| putative glutamate ABC transporter permease protein [Streptomyces griseus subsp. griseus NBRC 13350] gi|326655891|gb|EGE40737.1| polar amino acid ABC transporter, inner membrane subunit [Streptomyces cf. griseus XylebKG-1] Length = 214 Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 49/111 (44%), Positives = 73/111 (65%), Gaps = 5/111 (4%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +AL CYT+AFI E++RSG+ VPRGQ EAA +LG+ + V+LPQA RS+IPP+ S Sbjct: 89 LALGCYTSAFICEVLRSGINTVPRGQGEAARSLGMNFGQTLSTVVLPQAFRSVIPPVGST 148 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 + L KNS++A A +L+ T +N+ G +I IW FI++++ +I Sbjct: 149 LIALAKNSAIAGAFSVTELLGTYKT-LNELGYSI----IWSFIWIAVGYLI 194 >gi|311279447|ref|YP_003941678.1| polar amino acid ABC transporter, inner membrane subunit [Enterobacter cloacae SCF1] gi|308748642|gb|ADO48394.1| polar amino acid ABC transporter, inner membrane subunit [Enterobacter cloacae SCF1] Length = 252 Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 46/131 (35%), Positives = 78/131 (59%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+S +A++ A+++EI R+G+ ++ +GQMEA+ ALG+ K+ R V+LPQA R I+P Sbjct: 122 FLSCIVAITLNAGAYVSEIFRAGIQSIDKGQMEASCALGMPWWKSMRKVILPQAFRRILP 181 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PL + + ++K+SSLA A+G ADL T+ E L +Y ++ ++A + Sbjct: 182 PLGNNAIAIVKDSSLASAIGLADLAYAARTVSGAYATYWEPYLTISVVYWVITFLLAQLV 241 Query: 386 NRLNAKIALKE 396 NRL + + Sbjct: 242 NRLEKRFGKSD 252 >gi|330815543|ref|YP_004359248.1| Glutamate/aspartate transport system permease protein [Burkholderia gladioli BSR3] gi|327367936|gb|AEA59292.1| Glutamate/aspartate transport system permease protein [Burkholderia gladioli BSR3] Length = 225 Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 46/132 (34%), Positives = 80/132 (60%) Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320 T+ S IA S + AA+ +EI+R+G+ AVPRGQ+ AA ALG+++ +A RLV+LPQA Sbjct: 92 TIDIRLASAMIAFSLFEAAYYSEIIRAGIQAVPRGQVNAAFALGMSYGQAMRLVILPQAF 151 Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380 R+++P L +Q + L +++SL + AD I ++ G ++E++L Y + ++ Sbjct: 152 RAMVPLLLTQAIVLFQDTSLVYVISLADFFRTATNIGDRDGTSVEMVLFAGACYFVVCVL 211 Query: 381 IALFMNRLNAKI 392 + + L K+ Sbjct: 212 ASALVKGLQKKV 223 Score = 37.7 bits (86), Expect = 3.1, Method: Compositional matrix adjust. Identities = 22/65 (33%), Positives = 36/65 (55%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151 G + T + ++ + GTL+ RLS K + W R+YV VFR+IP ++V+ + + Sbjct: 19 GAIVTLQITLLAIVVGIVWGTLLALMRLSGVKPLQWFSRLYVTVFRSIPLVMVLLWFFLI 78 Query: 152 VLSVL 156 V VL Sbjct: 79 VPQVL 83 >gi|323697578|ref|ZP_08109490.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio sp. ND132] gi|323457510|gb|EGB13375.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio desulfuricans ND132] Length = 587 Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 48/134 (35%), Positives = 80/134 (59%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 EF + +T AF+AEI+R+G+ ++P+G +EAA + GLT + R V+LP A R II Sbjct: 136 EFWCATVGCGIFTGAFMAEIIRAGIQSIPKGLLEAAYSSGLTFPQTLRKVILPLAFREII 195 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 PPL S++LN +KN+SLA+ +G +L + + T + E + +YL LS+ IA Sbjct: 196 PPLGSEFLNNMKNTSLAMTIGVTELCWSMTEVYSLTYRTFEAFSVATVVYLGLSLSIAGI 255 Query: 385 MNRLNAKIALKEKK 398 + +N ++ + + Sbjct: 256 LYIVNERLKIMPRD 269 Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 62/202 (30%), Positives = 102/202 (50%), Gaps = 17/202 (8%) Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252 SF +G+V+ + R H + + LLYI LI G+P +++I YQ Sbjct: 394 SFFIGLVVGM-----GRTAHNRVFRIPCLLYIE--LIRGVPLILVILWFYQ--------A 438 Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312 F+ V F + IA++ + A+IAE VR G+ +P GQ+EAA A GLT+ + R Sbjct: 439 ILEFVFKVDVQ-AFWAATIAMTFFFGAYIAETVRGGIENIPPGQVEAAKASGLTYLQTMR 497 Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG-QAIEIILIWM 371 ++LPQA++ ++P L ++ K++SLA +G +L I N+ EI Sbjct: 498 KIVLPQALKQMLPALVGMFIAAFKDTSLAYIIGVMELTRAAYAINNRIMVYPFEIYTTVA 557 Query: 372 FIYLSLSIMIALFMNRLNAKIA 393 +Y S ++L+ RL K++ Sbjct: 558 VLYFVFSYFMSLYAKRLERKLS 579 Score = 43.1 bits (100), Expect = 0.082, Method: Compositional matrix adjust. Identities = 20/41 (48%), Positives = 27/41 (65%) Query: 107 ATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147 A ++GT+ G RLS+ K V W YVE+FRN P L+ +FF Sbjct: 73 ALVMGTVFGLARLSSFKPVYWFSTCYVELFRNTPLLIQLFF 113 Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust. Identities = 16/45 (35%), Positives = 30/45 (66%) Query: 110 IGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLS 154 IG +VG GR + N++ C +Y+E+ R +P ++VI + Y+++L Sbjct: 397 IGLVVGMGRTAHNRVFRIPCLLYIELIRGVPLILVILWFYQAILE 441 >gi|325971014|ref|YP_004247205.1| polar amino acid ABC transporter inner membrane subunit [Spirochaeta sp. Buddy] gi|324026252|gb|ADY13011.1| polar amino acid ABC transporter, inner membrane subunit [Spirochaeta sp. Buddy] Length = 286 Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 53/142 (37%), Positives = 90/142 (63%), Gaps = 12/142 (8%) Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287 LI G+P LV QL F +G+F I G ++ +ALS A++ EIVR+ Sbjct: 130 LIRGIPLLV------QLIFIYYAMGRFFKIEG------MIAAVVALSICFGAYMGEIVRA 177 Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347 G+ A+P+GQMEAAIALGL+ +A R V+LPQ ++ ++P + ++++++LK+SSL + + Sbjct: 178 GIQAIPKGQMEAAIALGLSRSQAFRYVILPQTIKVVLPAIGNEFISMLKDSSLVSTIALS 237 Query: 348 DLVSVGGTIINQTGQAIEIILI 369 D++ G I++T ++E +L+ Sbjct: 238 DILRKGREYISRTFLSLETMLV 259 Score = 42.0 bits (97), Expect = 0.16, Method: Compositional matrix adjust. Identities = 22/54 (40%), Positives = 31/54 (57%) Query: 96 TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 TF +I A +IGT+ G G +S + V + VYVE+ R IP LV + F+Y Sbjct: 91 TFQATIFAIIGALVIGTITGLGSVSKKRWVNMVSGVYVELIRGIPLLVQLIFIY 144 >gi|167461579|ref|ZP_02326668.1| polar amino acid ABC transporter, inner membrane subunit [Paenibacillus larvae subsp. larvae BRL-230010] Length = 217 Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 61/201 (30%), Positives = 110/201 (54%), Gaps = 14/201 (6%) Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251 F+ + G +L +F L R K K + YI + G P LV + Y ++F P Sbjct: 28 FTVICGTILGIFIC-LMRISKIKIVKGIAAAYIE--FLRGTPLLVQL---YIIYFALPQF 81 Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311 G P +S AL+ +AA++AEI R+G+ ++ +GQMEAA +LG+TH A Sbjct: 82 G--------ISLPGMVSGIAALTLNSAAYVAEIFRAGIESIDKGQMEAARSLGMTHNMAM 133 Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371 +L+++PQA+R+I+P L ++++ ++K SS+ VG DL+ T+ T +A E +++ Sbjct: 134 KLIIIPQAIRNILPALGNEFIVIIKESSIVSIVGITDLMFNADTVRGVTYKAFEPLIVAA 193 Query: 372 FIYLSLSIMIALFMNRLNAKI 392 +Y ++ ++ + + +I Sbjct: 194 VVYFIMTFTLSKLLGKFERRI 214 Score = 37.4 bits (85), Expect = 3.7, Method: Compositional matrix adjust. Identities = 27/84 (32%), Positives = 39/84 (46%), Gaps = 6/84 (7%) Query: 83 SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142 ++Y L G T LAF +I TI+G + R+S K+V I Y+E R P L Sbjct: 9 ATYWPMFLKGAGYTLVLAFFTVICGTILGIFICLMRISKIKIVKGIAAAYIEFLRGTPLL 68 Query: 143 VVIFFLYKSVLSVLPIPDHSIVLP 166 V ++ +Y +P I LP Sbjct: 69 VQLYIIY------FALPQFGISLP 86 >gi|224826755|ref|ZP_03699855.1| polar amino acid ABC transporter, inner membrane subunit [Lutiella nitroferrum 2002] gi|224600975|gb|EEG07158.1| polar amino acid ABC transporter, inner membrane subunit [Lutiella nitroferrum 2002] Length = 224 Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 63/205 (30%), Positives = 111/205 (54%), Gaps = 23/205 (11%) Query: 196 LGIVLSLF---ATRL---SRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249 LG VL+L + RL + F+ +++PLL + T+ F +P + K Sbjct: 37 LGTVLALMRLSSNRLLSGASKFYVNYFRSIPLLLVITWFYFVVPLIF-----------KW 85 Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309 + G+F +G F S +A + AA+ AEIVR+G+ ++ +GQ+ AA ALG+T+ + Sbjct: 86 ISGEFVAVG------AFTSCLVAFMMFEAAYYAEIVRAGVQSISKGQLNAAYALGMTYGQ 139 Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369 A RL++LPQA R ++P L Q + L +++SL AVG D ++ + + GQ E +++ Sbjct: 140 AMRLIILPQAFRKMMPLLLQQSIILFQDTSLVYAVGLMDFLNTARSKGDIVGQPNEFLIL 199 Query: 370 WMFIYLSLSIMIALFMNRLNAKIAL 394 +Y +S + + RL ++A+ Sbjct: 200 AGVVYFVISFGASTVVKRLQKRLAV 224 >gi|91781317|ref|YP_556524.1| polar amino acid ABC transporter inner membrane protein [Burkholderia xenovorans LB400] gi|91693977|gb|ABE37174.1| amino acid ABC transporter membrane protein, PAAT family [Burkholderia xenovorans LB400] Length = 299 Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 54/175 (30%), Positives = 97/175 (55%), Gaps = 8/175 (4%) Query: 231 GLPTLVLIALKYQLH-------FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283 G+P LV + Y L F P LG ++P + + L A++AE Sbjct: 123 GIPALVQLIFWYNLSAIFPHIGFSLPGLGSMFVDANKAITP-MTAAVLGLGLCEGAYMAE 181 Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343 IVRSG++ + GQ EAA+A+GL+ +A V+LPQA+R I+PP +Q + ++K +SLA Sbjct: 182 IVRSGILGIDAGQREAALAVGLSRAQAMLKVILPQALRIIVPPTGNQVIGMMKLTSLASV 241 Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 + F +L++ I N+T + I ++++ YL+LS+++++ L + +++ Sbjct: 242 ISFTELLTSAQLIFNRTFEVIPLLIVASLWYLALSLVLSIGQRYLEQRFGRYKRR 296 >gi|326333230|ref|ZP_08199477.1| glutamate permease [Nocardioidaceae bacterium Broad-1] gi|325948874|gb|EGD40967.1| glutamate permease [Nocardioidaceae bacterium Broad-1] Length = 229 Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 68/183 (37%), Positives = 104/183 (56%), Gaps = 36/183 (19%) Query: 191 VFSFVLGIVLSLFATRLS-----RHFHEK---TGKALPLLYISTFLIFGLPTLVLIALKY 242 +FS +LG+VL+ F R+S R T + PL + F +FGL Y Sbjct: 27 IFSLLLGVVLATF--RVSPVPVLRWIGSAVVYTFRNTPLTLVMFFTLFGL--------SY 76 Query: 243 QL--HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300 QL FDK +L + NF ++++ +ALS YT+ F+ E++RSG+ VP GQ EAA Sbjct: 77 QLGVSFDKELLYRNNF---------WLAV-LALSVYTSTFVCEVLRSGINTVPLGQAEAA 126 Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ- 359 A+GLT + RL++LPQA+RS+I PL S + + KN+++AV +G T++N+ Sbjct: 127 RAIGLTFTQNLRLIVLPQALRSVINPLASVLIAMTKNTTVAVTIGVTT-----ATMVNEA 181 Query: 360 TGQ 362 +GQ Sbjct: 182 SGQ 184 >gi|241765004|ref|ZP_04763000.1| polar amino acid ABC transporter, inner membrane subunit [Acidovorax delafieldii 2AN] gi|241365401|gb|EER60194.1| polar amino acid ABC transporter, inner membrane subunit [Acidovorax delafieldii 2AN] Length = 252 Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 55/134 (41%), Positives = 80/134 (59%), Gaps = 4/134 (2%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P F+ + +AL +T+A IAE VRSG+ A+PRGQ A +A+G T + R VLLP A R I Sbjct: 109 PGFVLVVLALGFFTSARIAEQVRSGIQALPRGQRYAGLAMGFTTFQTYRHVLLPMAFRII 168 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 IPPLTS+ +N+ KNSS+A AV A+L +T + +E+ L Y ++ A Sbjct: 169 IPPLTSETMNIFKNSSVAFAVSVAELTMFAMQAQEETSRGVEVYLAVTACY----VVSAF 224 Query: 384 FMNRLNAKIALKEK 397 +NR+ A I + + Sbjct: 225 AINRIMAFIEKRAR 238 Score = 38.5 bits (88), Expect = 1.7, Method: Compositional matrix adjust. Identities = 27/70 (38%), Positives = 36/70 (51%), Gaps = 8/70 (11%) Query: 110 IGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLP----IPDHS-IV 164 IGTL L +V +C +VE+FRNIP LV IF Y V ++ P +P +V Sbjct: 59 IGTLR---TLEGRPMVVRLCNAWVELFRNIPLLVQIFLWYHVVPTLFPALQAVPGFVLVV 115 Query: 165 LPFGMFLNNR 174 L G F + R Sbjct: 116 LALGFFTSAR 125 >gi|312602224|ref|YP_004022069.1| Amino acid ABC transporter permease [Burkholderia rhizoxinica HKI 454] gi|312169538|emb|CBW76550.1| Amino acid ABC transporter permease protein [Burkholderia rhizoxinica HKI 454] Length = 242 Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 57/141 (40%), Positives = 80/141 (56%), Gaps = 2/141 (1%) Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279 PLL F FG TL+ L L + P Q + EF++ +I L+ Y+ A Sbjct: 66 PLLVQLMFWYFGAATLLPDGLMQWL--NAPHAFQVGALSLRWPPFEFVAGWIGLTFYSCA 123 Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339 F+ E R+GL V GQ +AA ALGLT +A R V+LPQA R+ +PPL QY+N++KNSS Sbjct: 124 FVGEEFRAGLRGVSGGQRQAAAALGLTRWQAFRHVVLPQAARNAMPPLFGQYMNIVKNSS 183 Query: 340 LAVAVGFADLVSVGGTIINQT 360 L +A+G A+L + +T Sbjct: 184 LTMAIGLAELSYASRQVETET 204 Score = 37.0 bits (84), Expect = 5.8, Method: Compositional matrix adjust. Identities = 25/76 (32%), Positives = 38/76 (50%) Query: 82 DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141 + Y +L GF T LA + ++ AT+ G + + +LV + YV VFRN P Sbjct: 8 EPKYVGWLLQGFGVTLALAATVIVTATVSGFALAMAHSADARLVRRVAAAYVLVFRNSPL 67 Query: 142 LVVIFFLYKSVLSVLP 157 LV + F Y ++LP Sbjct: 68 LVQLMFWYFGAATLLP 83 >gi|78355443|ref|YP_386892.1| amino acid ABC transporter permease [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78217848|gb|ABB37197.1| amino acid ABC transporter membrane protein, PAAT family [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 277 Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 71/210 (33%), Positives = 114/210 (54%), Gaps = 12/210 (5%) Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIF-GLPTLVLIALKY 242 + S + G+VL L+ R E + +P+L I ++ F G P LV AL + Sbjct: 64 YALSLLAGLVLGLWRVSRCRLLREAATFYIEIVRGIPMLVILYYIAFVGAPGLV-DALNW 122 Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYI-ALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301 L P++ S S +F I AL+ +AFIAEIVR+G+ +V GQMEAA Sbjct: 123 LLS---PLIEAGLTARISVRSLDFTWRAILALTVGYSAFIAEIVRAGVESVAAGQMEAAR 179 Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361 +LGL+ +A R V+LPQA+R+++PPL + ++ +LK+S+L A+G D+ +G T Sbjct: 180 SLGLSRWQAMRKVVLPQALRNVLPPLANDFVAMLKDSALVSALGVQDITQLGKVYSASTF 239 Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 E + F+YL ++I ++L + L + Sbjct: 240 MFFETYNVVAFLYLVMTIGLSLCIRGLERR 269 >gi|260774959|ref|ZP_05883859.1| putative amino acid ABC transporter permease protein [Vibrio coralliilyticus ATCC BAA-450] gi|260609049|gb|EEX35208.1| putative amino acid ABC transporter permease protein [Vibrio coralliilyticus ATCC BAA-450] Length = 246 Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 58/178 (32%), Positives = 98/178 (55%), Gaps = 23/178 (12%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 +++P+L + ++ +GLPTL+ I+L HF V IAL+ Sbjct: 89 RSIPVLVLLLWVYYGLPTLLDISLD---HFWAGV--------------------IALTVA 125 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 +AF+AE+ R G+ ++ +GQ EAA +LGL + + RLV+LPQA R I+PPL +Q++ +LK Sbjct: 126 ESAFMAEVFRGGIQSIAKGQHEAAESLGLNYWQKMRLVILPQAFRQILPPLGNQFVYILK 185 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394 SSL +G +DL ++ +EI + YL L ++++ + L +IA+ Sbjct: 186 MSSLVSVIGLSDLTRRANELVVNEYLPLEIYTFLVLEYLILILLVSQAVRWLEQRIAI 243 Score = 42.7 bits (99), Expect = 0.094, Method: Compositional matrix adjust. Identities = 27/71 (38%), Positives = 42/71 (59%), Gaps = 1/71 (1%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151 GF +T ++ M A +IG LV LS + + + RVYVEV R+IP LV++ ++Y Sbjct: 44 GFYDTITISLLSMTLAMLIGLLVALPSLSNARWLNGLNRVYVEVIRSIPVLVLLLWVYYG 103 Query: 152 VLSVLPIP-DH 161 + ++L I DH Sbjct: 104 LPTLLDISLDH 114 >gi|78358111|ref|YP_389560.1| amino acid ABC transporter permease [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78220516|gb|ABB39865.1| amino acid ABC transporter membrane protein 1, PAAT family [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 309 Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 72/212 (33%), Positives = 109/212 (51%), Gaps = 19/212 (8%) Query: 188 KIFVFSFVLGIVLSLFAT--RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH 245 K+ S VL V+ L A RLSR G+AL + Y+ T + P L+ + + Y Sbjct: 108 KVSAVSLVLAAVIGLAAVLLRLSRSV---VGRALAVCYLET--VRNTPLLIQLFVMY--F 160 Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305 P+ G F S +ALS + A+I+EI+R+G+ AVP GQ EAA +LGL Sbjct: 161 VVAPLTGM----------DRFFSAVLALSLFEGAYISEIIRAGIQAVPAGQWEAARSLGL 210 Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365 T R V+LPQA+ ++PPLT Q + L+K+S+L + DL II +T E Sbjct: 211 TRAATYRKVVLPQALGHVLPPLTGQMVTLVKDSALVSTIAIYDLTMQAQAIIAETFLVFE 270 Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 I + +YL +++ ++L RL ++ K Sbjct: 271 IWFMVAAMYLVVTLSLSLLAQRLECRLRTGSK 302 >gi|297156742|gb|ADI06454.1| putative glutamate ABC transporter permease protein [Streptomyces bingchenggensis BCW-1] Length = 215 Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 50/126 (39%), Positives = 78/126 (61%), Gaps = 2/126 (1%) Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 AL CYT+ FI E VRSG+ VP GQ EAA +LG+T + R+++LPQA R++IPPL+S + Sbjct: 91 ALGCYTSTFICEAVRSGIGTVPIGQAEAARSLGMTFFQTLRMIILPQATRTVIPPLSSIF 150 Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI-YLSLSIMIALFMNRLNA 390 + L KNS++A A +L SV +++ G I I +W+ + YL ++ I+ L Sbjct: 151 IALTKNSAIAGAFSVTELFSV-SKLLSDKGYPIGWIFLWIAVAYLVITFSISGLFRLLER 209 Query: 391 KIALKE 396 ++ + Sbjct: 210 RMEVSR 215 >gi|94309345|ref|YP_582555.1| amino acid ABC transporter permease [Cupriavidus metallidurans CH34] gi|93353197|gb|ABF07286.1| glutamate and aspartate transporter subunit ; membrane component of ABC superfamily [Cupriavidus metallidurans CH34] Length = 242 Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 45/129 (34%), Positives = 78/129 (60%) Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322 + +F++ + L +TAA + E VRSG+ ++PRGQ A +A+G T + R VLLP A R Sbjct: 104 TQQFLAAMLCLGTFTAARVCEQVRSGINSLPRGQKNAGLAMGFTLPQTYRYVLLPMAFRV 163 Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382 I+PPLTS++LN+ KNS++A +G +L + G +++ T + E + +Y ++ + Sbjct: 164 IVPPLTSEFLNIFKNSAVASTIGLLELAAQGRQLVDYTARPYESFIAVTVLYALINFTVM 223 Query: 383 LFMNRLNAK 391 L M + + Sbjct: 224 LIMRWVERR 232 Score = 44.3 bits (103), Expect = 0.031, Method: Compositional matrix adjust. Identities = 28/77 (36%), Positives = 41/77 (53%) Query: 81 SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140 ++ +Y ++ G T L S I A IG+++G R NK ++ I YVE+FRNIP Sbjct: 16 ANETYLDWMISGLKVTIALGLSSWIIALAIGSVLGVLRTVPNKWLSGIAATYVEIFRNIP 75 Query: 141 PLVVIFFLYKSVLSVLP 157 LV +F Y +LP Sbjct: 76 LLVQLFIWYFVGPELLP 92 >gi|320174702|gb|EFW49834.1| Glutamate Aspartate transport system permease protein GltJ [Shigella dysenteriae CDC 74-1112] Length = 132 Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 47/124 (37%), Positives = 77/124 (62%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + L +TAA + E VR+ + ++PRGQ AA+A+GLT +A R VLLP A R I+PP+TS+ Sbjct: 2 LCLGLFTAARVCEQVRAAIQSLPRGQKNAALAMGLTLPQAYRYVLLPNAYRVIVPPMTSE 61 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 +NL+KNS++A +G D+ + G +++ + A E Y+ ++ +I L M + Sbjct: 62 MMNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAWESFTAITLAYVLINAIIMLVMTLVER 121 Query: 391 KIAL 394 K+ L Sbjct: 122 KVRL 125 >gi|320159829|ref|YP_004173053.1| amino acid ABC transporter permease protein [Anaerolinea thermophila UNI-1] gi|319993682|dbj|BAJ62453.1| amino acid ABC transporter permease protein [Anaerolinea thermophila UNI-1] Length = 274 Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 59/181 (32%), Positives = 103/181 (56%), Gaps = 11/181 (6%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 + +PLL F + P++V L V NF+ +P M++ CY Sbjct: 105 RGIPLLVQLYFWYYAFPSIV-----RDLGTQWNVESMKNFVA----NPYVMAIAGLTLCY 155 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 A++ E+ R+G+ ++P+GQMEAA +LG+T+ +A R ++LPQA+R I+PP+ ++++ LLK Sbjct: 156 -GAYMTEVYRAGIQSIPKGQMEAARSLGMTYFQAMRYIILPQAIRVILPPVGNEFITLLK 214 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 +SSL AV ADL G T + I L+ +YL ++++ A + + A+++ KE Sbjct: 215 DSSLVSAVAVADLTRRGREFQAITPLPLHIYLMIGLMYLIMTLLSARVVAMIEARMS-KE 273 Query: 397 K 397 + Sbjct: 274 R 274 >gi|307941624|ref|ZP_07656979.1| glutamine transport system permease protein GlnP [Roseibium sp. TrichSKD4] gi|307775232|gb|EFO34438.1| glutamine transport system permease protein GlnP [Roseibium sp. TrichSKD4] Length = 265 Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 64/217 (29%), Positives = 115/217 (52%), Gaps = 18/217 (8%) Query: 190 FVFSFVLGIVLSL------FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLI---AL 240 F + LG+VL++ A R F+ + + LP+L + ++ F LV+ A+ Sbjct: 58 FSLASALGLVLAVASLSRFLAVRQVARFYIEVVRGLPILVLLLYIAFVAAPLVIALINAI 117 Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300 L D F P +AL+ +AFIAE+ R+G+ AV +GQ+EAA Sbjct: 118 IEPLGMDPLRTRDF---------PLIWRAILALTIGYSAFIAEVFRAGIQAVDKGQIEAA 168 Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 ALG++ RL++ PQA+R+I+PPL + ++ ++K+SSL +G AD+ +G + Sbjct: 169 KALGMSGWLRFRLIVFPQALRTILPPLGNDFVAMIKDSSLVSVLGVADITQLGKVYAAGS 228 Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 + E + FIYL++++ ++L + + K ++E+ Sbjct: 229 FRFFETYNVVAFIYLTMTVTLSLALRKFERKTRIEER 265 >gi|302522779|ref|ZP_07275121.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces sp. SPB78] gi|302431674|gb|EFL03490.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces sp. SPB78] Length = 214 Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 50/122 (40%), Positives = 78/122 (63%), Gaps = 2/122 (1%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +AL CYT+AFI E +RSG+ VP+GQ EAA +LG++ + V+LPQA R++IPP+ SQ Sbjct: 89 LALGCYTSAFICEALRSGINTVPKGQGEAARSLGMSFGQTLTAVILPQAFRAVIPPVGSQ 148 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI-YLSLSIMIALFMNRLN 389 + L KNS++A A +L+ T +N+ G I + +W+ + YL L++ I+ N L Sbjct: 149 LIALAKNSAIAGAFSVTELLGTYKT-LNELGFNIVWVFVWIAVGYLILTLAISALFNYLE 207 Query: 390 AK 391 + Sbjct: 208 HR 209 >gi|222832612|gb|EEE71089.1| ABC transporter family protein [Populus trichocarpa] Length = 465 Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 51/105 (48%), Positives = 68/105 (64%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P F+ + +AL +T+A IAE VRSG+ A+PRGQ A +A+G T + R VLLP A R I Sbjct: 149 PGFVLVVLALGFFTSARIAEQVRSGIQALPRGQRYAGMAMGFTTFQYYRYVLLPMAFRII 208 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368 IPPLTS+ +N+ KNSS+A AV A+L +T + IEI L Sbjct: 209 IPPLTSETMNVFKNSSVAFAVSVAELTMFAMQAQEETSRGIEIYL 253 Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 44/128 (34%), Positives = 76/128 (59%) Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326 +S I + AA+ +EI+R+G+ ++PRGQ+ A A+G+T+ + RLV+LPQA R+++P Sbjct: 336 VSAIITFIAFEAAYFSEIMRAGIQSIPRGQVSAGQAMGMTYGQNMRLVVLPQAFRNMLPV 395 Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386 L +Q + L +++SL A+G D++ G+ IE L Y L ++ + Sbjct: 396 LLTQTIILFQDTSLVYAIGAYDMLKGFEVAGKNYGRPIESYLAAGVTYFVLCYSLSWAVK 455 Query: 387 RLNAKIAL 394 RL+ KIA+ Sbjct: 456 RLHKKIAI 463 Score = 43.1 bits (100), Expect = 0.081, Method: Compositional matrix adjust. Identities = 35/112 (31%), Positives = 55/112 (49%), Gaps = 10/112 (8%) Query: 71 EIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICR 130 E+ Q D +Y +L + T ++ ++ A ++G+L+G R + WI R Sbjct: 56 EVGQSCFGKNGDITYLDWMLSAWGWTISVSLLSLVIALVVGSLIGTLRTLEGR--PWIVR 113 Query: 131 V---YVEVFRNIPPLVVIFFLYKSVLSVLP----IPDHS-IVLPFGMFLNNR 174 + +VE+FRNIP LV IF Y V S +P +P +VL G F + R Sbjct: 114 LGNAWVELFRNIPLLVHIFMWYHVVPSFVPALKSLPGFVLVVLALGFFTSAR 165 >gi|242279379|ref|YP_002991508.1| polar amino acid ABC transporter inner membrane subunit [Desulfovibrio salexigens DSM 2638] gi|242122273|gb|ACS79969.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio salexigens DSM 2638] Length = 269 Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 78/252 (30%), Positives = 128/252 (50%), Gaps = 25/252 (9%) Query: 146 FFLYKSVLSV------LPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIV 199 + LYK S+ +P L G F+ L +T++ FV +F++G+ Sbjct: 32 YLLYKGTESLGYNWQWFRVPGFFFSLNEGKFIPGPLLEGLGVTLEITGLSFVLTFIIGLG 91 Query: 200 LSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGG 259 ++ RLS F T KA+ +Y+ +I P +LI L + P++G I G Sbjct: 92 TAI--MRLSGSF---TAKAIARIYLE--IIRNTP--LLIQLFFIYFVAAPIIG----ING 138 Query: 260 STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319 F + IALS + A+ +EI R+G+ ++ RGQ EAA +LG + A V+LPQA Sbjct: 139 ------FWASVIALSLFEGAYASEIFRAGITSIDRGQWEAAFSLGGDKKFAYINVILPQA 192 Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379 + I PPL Q + L+K+S+L V DL G +II++T EI I +YLS+++ Sbjct: 193 VPRIAPPLAGQAIALVKDSALVSTVAIYDLTMQGQSIISETFLTFEIWFIVAAVYLSITL 252 Query: 380 MIALFMNRLNAK 391 +++ +++ K Sbjct: 253 LLSWVLDKTARK 264 >gi|209517528|ref|ZP_03266368.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. H160] gi|209502061|gb|EEA02077.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. H160] Length = 225 Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 45/126 (35%), Positives = 79/126 (62%) Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327 S +A S + AA+ +EI+R+G+ AVPRGQ+ AA ALG+T+ +A RL++LPQA R+++P L Sbjct: 99 SAMVAFSLFEAAYYSEIIRAGIQAVPRGQVNAAFALGMTYAQAMRLIVLPQAFRAMVPLL 158 Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387 +Q + L +++SL + AD I ++ G +E++L +Y + ++ + + Sbjct: 159 LTQGIVLFQDTSLVYVISLADFFRTATNIGDRDGTNVEMVLFAGAVYFVICVIASSLVKG 218 Query: 388 LNAKIA 393 L K+A Sbjct: 219 LQKKVA 224 >gi|120609003|ref|YP_968681.1| polar amino acid ABC transporter inner membrane subunit [Acidovorax citrulli AAC00-1] gi|120587467|gb|ABM30907.1| amino acid ABC transporter membrane protein, PAAT family [Acidovorax citrulli AAC00-1] Length = 260 Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 62/157 (39%), Positives = 89/157 (56%), Gaps = 12/157 (7%) Query: 214 KTGKALPLLYISTFLIF---GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY 270 +T + PL + + F I+ G P LV I Y F PVL + G + P+F + Sbjct: 81 RTARWTPLRWAARFYIWVIRGTPLLVQILFVY---FALPVL-----VPGLNL-PDFAAAV 131 Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +AL A+ +E +R+GL+AVPRGQ EAA ALGL+ V+ PQA + +PPL S Sbjct: 132 VALGLNVGAYNSEAIRAGLLAVPRGQTEAARALGLSRTHVFFDVVFPQAFKISLPPLVSN 191 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367 ++ LLK+SSLA A+G +L +VG I + T Q I + Sbjct: 192 FVALLKDSSLAYAIGVVELTNVGNRIQSATFQPIATL 228 >gi|218135088|ref|ZP_03463892.1| hypothetical protein BACPEC_02993 [Bacteroides pectinophilus ATCC 43243] gi|217990473|gb|EEC56484.1| hypothetical protein BACPEC_02993 [Bacteroides pectinophilus ATCC 43243] Length = 508 Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 61/214 (28%), Positives = 118/214 (55%), Gaps = 20/214 (9%) Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTG-----KALPLLYISTFLIFGLPTLVLIALKYQ 243 I +F+ ++GIVL F + R H+K G A+ +Y++ ++ G P +V + + Y Sbjct: 310 ITLFAIIIGIVLG-FLIAIVRTNHDKNGGLTILNAICKVYLT--IVRGTPVMVQLLIIYY 366 Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 + F S + + + IA +AA++AE+VRSG++AV GQ EA +L Sbjct: 367 VIF------------ASVNTSKILVAVIAFGLNSAAYVAEVVRSGIMAVDNGQFEAGRSL 414 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363 GL + + + ++LPQA+++I+P L +++++LLK +S++ +G DL G I + T + Sbjct: 415 GLNYSQTMKSIILPQAVKNILPALGNEFISLLKETSISGYIGLMDLTKGGDIIRSITYEP 474 Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 ++ IYL + ++++ + RL ++ E+ Sbjct: 475 FMPLIAVAIIYLVIVMILSYGVGRLERRLKKNER 508 >gi|328470613|gb|EGF41524.1| amino acid ABC transporter permease protein [Vibrio parahaemolyticus 10329] Length = 265 Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 72/241 (29%), Positives = 120/241 (49%), Gaps = 19/241 (7%) Query: 158 IPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGK 217 +PD+ G + + +T++ + F+ VLG+V +L RLS K G Sbjct: 43 VPDYIAFYEDGEWWPAELIDGLLVTLNISVISLFFTLVLGLVTALL--RLS---DSKVGN 97 Query: 218 ALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT 277 + Y+ +I P LV I L Y + PV+G F + +ALS + Sbjct: 98 VIGTTYVE--VIRNTPLLVQIYLLYFVF--GPVIGL----------DRFSTAVLALSLFQ 143 Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 A+ AEI R+GL ++P+GQ EAA LGL+ + V+LPQ ++ +PPLT++ ++L+KN Sbjct: 144 GAYTAEIFRAGLNSIPKGQFEAAQTLGLSPFYTYKDVILPQVLQRTLPPLTNEVVSLIKN 203 Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 SS+ + DL + I+++T EI IYL+L++ ++ L K+ + Sbjct: 204 SSIVSVMAIFDLTTQARNIVSETAMPFEIWFTVAAIYLALTLSLSGLSAWLEHKLGASWR 263 Query: 398 K 398 K Sbjct: 264 K 264 >gi|188590807|ref|YP_001795407.1| high-affinity glutamine transporter, ABC transporter [Cupriavidus taiwanensis LMG 19424] gi|170937701|emb|CAP62685.1| high-affinity glutamine transport protein, ABC transporter, membrane component [Cupriavidus taiwanensis LMG 19424] Length = 222 Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 46/129 (35%), Positives = 82/129 (63%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P F+ I L Y+ A+++EIVR + +V +GQMEAA ++G++ +A R ++LPQA+ + Sbjct: 87 PAFVCGVIGLGIYSGAYVSEIVRGAIQSVDKGQMEAARSIGMSSGQAMRAIILPQAIVRM 146 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 IPPL ++++ L+KNS+L + ADL+ G II+ + +++E+ L +YL L+ L Sbjct: 147 IPPLGNEFIALIKNSALVSLLTIADLMHEGQKIISVSYRSLEVYLAIALVYLILTSAAGL 206 Query: 384 FMNRLNAKI 392 + R ++ Sbjct: 207 ILRRAEQRL 215 >gi|163734792|ref|ZP_02142230.1| glutamate/aspartate ABC transporter, permease protein [Roseobacter litoralis Och 149] gi|161391897|gb|EDQ16228.1| glutamate/aspartate ABC transporter, permease protein [Roseobacter litoralis Och 149] Length = 239 Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 59/173 (34%), Positives = 87/173 (50%), Gaps = 13/173 (7%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 + +PLL F +P +V + D P +PEF++ +AL Y Sbjct: 67 RNVPLLVQMFIWYFAVPEMVPDDWGRWMKRDMP-------------NPEFVTAVVALGLY 113 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 TA+ IAE VR+G+ VP G AA A GL + R VLLP + R I+PPLTS++L + K Sbjct: 114 TASRIAEQVRAGIETVPPGLTAAATAHGLNVSQTYRYVLLPISFRMIVPPLTSEFLTVFK 173 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 NSSLA+ +G +L + I T Q E IY+ ++++ + M L Sbjct: 174 NSSLALTIGLLELTAQSQQIAEYTFQGFEAFTAATVIYVCIALIATILMQILE 226 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 29/76 (38%), Positives = 44/76 (57%) Query: 82 DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141 + Y + ++ GF T +A S A +IG LVG G+ N+ + IC YVE+FRN+P Sbjct: 12 EEQYLSWLISGFGWTVSVALSAWCIAIVIGVLVGVGKTVPNRFIRAICATYVELFRNVPL 71 Query: 142 LVVIFFLYKSVLSVLP 157 LV +F Y +V ++P Sbjct: 72 LVQMFIWYFAVPEMVP 87 >gi|312278470|gb|ADQ63127.1| ABC-type amino acid transport system, permease component [Streptococcus thermophilus ND03] Length = 232 Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 39/92 (42%), Positives = 67/92 (72%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G+ + P ++ + + YT A+I+EI+R+G+ AVP+GQ EAA++ G T+ R+++LPQ Sbjct: 95 GNVMIPTSLTAILCVGVYTGAYISEIIRTGIEAVPKGQTEAALSQGFTYADTMRIIILPQ 154 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 A+R+I+PPLT+Q +NL+KN+S + AD++ Sbjct: 155 AVRTILPPLTNQVVNLIKNTSTVAIISGADIM 186 Score = 42.0 bits (97), Expect = 0.19, Method: Compositional matrix adjust. Identities = 27/77 (35%), Positives = 46/77 (59%), Gaps = 7/77 (9%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV--VIFFLY 149 GF+ T ++ +I A ++G + GA + NK++ I RVYVE+F+N P LV V+ F Sbjct: 29 GFLYTLGISIGALIVALLLGLIFGAMSSTRNKVLRGISRVYVEIFQNTPLLVQFVVVFYG 88 Query: 150 KSVLSVLPIPDHSIVLP 166 S+L+ D ++++P Sbjct: 89 ISILT-----DGNVMIP 100 >gi|239945338|ref|ZP_04697275.1| putative glutamate ABC transporter permease protein [Streptomyces roseosporus NRRL 15998] gi|239991795|ref|ZP_04712459.1| putative glutamate ABC transporter permease protein [Streptomyces roseosporus NRRL 11379] gi|291448800|ref|ZP_06588190.1| glutamate transporter permease [Streptomyces roseosporus NRRL 15998] gi|291351747|gb|EFE78651.1| glutamate transporter permease [Streptomyces roseosporus NRRL 15998] Length = 214 Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 49/111 (44%), Positives = 73/111 (65%), Gaps = 5/111 (4%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IAL CYT+AFI E++RSG+ VP+GQ EAA +LG+ + V+LPQA RS+IPP+ S Sbjct: 89 IALGCYTSAFICEVLRSGINTVPKGQGEAARSLGMNFGQTLSTVVLPQAFRSVIPPVGST 148 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 + L KNS++A A +L+ T +N+ G +I IW FI++++ +I Sbjct: 149 LIALAKNSAIAGAFSVTELLGTYKT-LNELGYSI----IWSFIWIAVGYLI 194 >gi|318059838|ref|ZP_07978561.1| putative glutamate ABC transporter permease protein [Streptomyces sp. SA3_actG] gi|318077305|ref|ZP_07984637.1| putative glutamate ABC transporter permease protein [Streptomyces sp. SA3_actF] Length = 214 Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 50/122 (40%), Positives = 78/122 (63%), Gaps = 2/122 (1%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +AL CYT+AFI E +RSG+ VP+GQ EAA +LG++ + V+LPQA R++IPP+ SQ Sbjct: 89 LALGCYTSAFICEALRSGINTVPKGQGEAARSLGMSFGQTLTAVILPQAFRAVIPPVGSQ 148 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI-YLSLSIMIALFMNRLN 389 + L KNS++A A +L+ T +N+ G I + +W+ + YL L++ I+ N L Sbjct: 149 LIALAKNSAIAGAFSVTELLGTYKT-LNELGFNIVWVFVWIAVGYLILTLAISALFNYLE 207 Query: 390 AK 391 + Sbjct: 208 HR 209 >gi|171780124|ref|ZP_02921028.1| hypothetical protein STRINF_01912 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] gi|171281472|gb|EDT46907.1| hypothetical protein STRINF_01912 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] Length = 234 Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 53/168 (31%), Positives = 91/168 (54%), Gaps = 31/168 (18%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 + +FVLG++ ++ +R KA+ +Y+ F + P+ Sbjct: 42 ILAFVLGVIFGAMSSSKNRVL-----KAIARVYVEVFQ------------------NTPL 78 Query: 251 LGQFNFI--------GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302 L QF F+ G + F + + + Y A+IAE++RSG+ AVP+GQ EAA++ Sbjct: 79 LVQFVFVYYGLAIMTNGVIMISTFFTAVLCVGIYHGAYIAEVIRSGIEAVPKGQTEAALS 138 Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 G T+ + L++LPQA+R+I+PPLT+Q +NL+KN+S + AD++ Sbjct: 139 QGFTYSQTMSLIILPQAVRTILPPLTNQVVNLIKNTSTVAIISGADIM 186 Score = 45.4 bits (106), Expect = 0.015, Method: Compositional matrix adjust. Identities = 24/58 (41%), Positives = 36/58 (62%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 GF+ T ++ +I A ++G + GA S N+++ I RVYVEVF+N P LV F+Y Sbjct: 29 GFLYTLGMSICALILAFVLGVIFGAMSSSKNRVLKAIARVYVEVFQNTPLLVQFVFVY 86 >gi|168485721|ref|ZP_02710229.1| ABC transporter membrane-spanning permease - glutamine transport [Streptococcus pneumoniae CDC1087-00] gi|183571097|gb|EDT91625.1| ABC transporter membrane-spanning permease - glutamine transport [Streptococcus pneumoniae CDC1087-00] Length = 225 Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 73/234 (31%), Positives = 112/234 (47%), Gaps = 35/234 (14%) Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFAT------RLSRHFHEKTGKALP 220 FG F N G F TL + + F+ + VLGI +T R+ H + + P Sbjct: 14 FGQFFN--GFLF-TLALAIGS--FILAMVLGIFFGAMSTSKRPILRILAHIFVEFYQNTP 68 Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280 LL + +GLP + D ++ P + + + + Y A+ Sbjct: 69 LLVQFVIVFYGLPLIS----------DHTIM-----------IPIYWTAVLCVGLYHGAY 107 Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340 IAE++RSG+ ++P GQMEAA++ G T+ A RL+ LPQA R I+PPLT+Q +NL+KN+S Sbjct: 108 IAEVIRSGIQSIPSGQMEAALSQGFTYISAMRLITLPQAFRIILPPLTNQIVNLIKNTST 167 Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF---MNRLNAK 391 + DL+ V + G I L +Y +L +A F M + N K Sbjct: 168 VAIISGVDLMFVTKSWSALNGNYIPAFLGAALLYFALCFPVAQFGRKMEQANKK 221 >gi|302540996|ref|ZP_07293338.1| amino acid ABC transporter, permease PEB1 [Streptomyces hygroscopicus ATCC 53653] gi|302458614|gb|EFL21707.1| amino acid ABC transporter, permease PEB1 [Streptomyces himastatinicus ATCC 53653] Length = 216 Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 76/242 (31%), Positives = 126/242 (52%), Gaps = 38/242 (15%) Query: 165 LPFGMFLNNRGLSFPTL--TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222 + + + +NR L L T++ +A +LG+V++ A R SR +P+L Sbjct: 1 MDWSVLWSNRDLYASGLWSTVELSAAAIAACTLLGLVIA--AIRTSR---------IPVL 49 Query: 223 ------YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 Y+ F G P LV + Y F LG IG +V F + +AL+ + Sbjct: 50 AQFARCYLEIFR--GTPLLVQMLFIY---FGAAYLG----IGNISV---FGAALLALTLF 97 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 A++AEI RSG+ AVPRGQ EAA LGL+ + V+LPQ ++PPL QYL+L+K Sbjct: 98 QGAYVAEIFRSGIEAVPRGQWEAARVLGLSRVQTFGTVILPQTRAIVLPPLVGQYLSLVK 157 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 ++S+AV +G+A+L+ G I+++ G YL+++++ + + L+ + E Sbjct: 158 DTSIAVVIGYAELLREGQAIVDRDGHP-------GMAYLAIAVLYFVICSPLSVVVRRME 210 Query: 397 KK 398 +K Sbjct: 211 RK 212 >gi|261380100|ref|ZP_05984673.1| polar amino amino acid ABC transporter, PAAT family, permease protein [Neisseria subflava NJ9703] gi|284797319|gb|EFC52666.1| polar amino amino acid ABC transporter, PAAT family, permease protein [Neisseria subflava NJ9703] Length = 248 Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 49/121 (40%), Positives = 75/121 (61%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +AL + A+I EI R+G+ ++ +GQMEAA +LGLT+ +A R V+LPQA+R ++PPL S+ Sbjct: 122 LALVANSGAYICEIFRAGIQSIDKGQMEAARSLGLTYTQAMRYVILPQALRRMLPPLASE 181 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++ LLK+SSL +G A+L V TI + E + IYL L+ + RL Sbjct: 182 FITLLKDSSLLSVIGVAELAYVQSTITGRYSVYEEPLYTIALIYLVLTSFLGWVFLRLEN 241 Query: 391 K 391 + Sbjct: 242 R 242 >gi|322374750|ref|ZP_08049264.1| amino acid ABC transporter, permease protein [Streptococcus sp. C300] gi|321280250|gb|EFX57289.1| amino acid ABC transporter, permease protein [Streptococcus sp. C300] Length = 225 Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 75/242 (30%), Positives = 117/242 (48%), Gaps = 51/242 (21%) Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFAT----------RLSRHFHEKTG 216 FG F N G F TL + + F+ + VLGI+ + +T R+ F++ T Sbjct: 14 FGQFFN--GFLF-TLALAIGS--FILAMVLGIIFGVLSTSKHQILRILARIFVEFYQNT- 67 Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY----IA 272 PLL + +GLP + D ++ +S+Y + Sbjct: 68 ---PLLVQFVIVFYGLPLIS----------DHTIM---------------ISIYWTAVLC 99 Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 + Y A+IAE++RSG+ ++P GQMEAA++ G T+ A RL++LPQA R I+PPLT+Q + Sbjct: 100 VGLYHGAYIAEVIRSGIQSIPSGQMEAALSQGFTYISAMRLIILPQAFRIILPPLTNQIV 159 Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF---MNRLN 389 NL+KN+S + DL+ V + G I L +Y +L +A F M + N Sbjct: 160 NLIKNTSTVAIISGVDLMFVTKSWSALNGNYIPAFLGAALLYFALCFPVAQFGRKMEQAN 219 Query: 390 AK 391 K Sbjct: 220 KK 221 >gi|228983843|ref|ZP_04144038.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228775892|gb|EEM24263.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 214 Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 61/185 (32%), Positives = 100/185 (54%), Gaps = 30/185 (16%) Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPT 234 +T++ V SF++G V+ + F + G + LPLL I F F LP Sbjct: 21 ITLEVALVAIVLSFIIGSVIGIVRYTKIPVFSQILGFIVEVIRNLPLLLIIFFTYFALPE 80 Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294 + LK ++ ++ +AL+ + AA I+EIVRSGL+++ + Sbjct: 81 ---VGLKLEI---------------------ITAVIVALTIFEAAMISEIVRSGLLSIEK 116 Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354 GQ+EAA + GLT+ +A ++LPQA+R ++PPL SQ+++LLK++SLAVA+ +L+ Sbjct: 117 GQIEAARSSGLTYVQALWYIILPQALRRMVPPLVSQFISLLKDTSLAVAISLPELMHNAQ 176 Query: 355 TIINQ 359 I Q Sbjct: 177 IISGQ 181 Score = 36.6 bits (83), Expect = 7.1, Method: Compositional matrix adjust. Identities = 21/61 (34%), Positives = 36/61 (59%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G + T +A ++ + IIG+++G R + + + I VEV RN+P L++IFF Sbjct: 15 LLKGLLITLEVALVAIVLSFIIGSVIGIVRYTKIPVFSQILGFIVEVIRNLPLLLIIFFT 74 Query: 149 Y 149 Y Sbjct: 75 Y 75 >gi|301793799|emb|CBW36190.1| putative amino acid ABC transporter, permease protein [Streptococcus pneumoniae INV104] Length = 225 Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 72/234 (30%), Positives = 112/234 (47%), Gaps = 35/234 (14%) Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFAT------RLSRHFHEKTGKALP 220 FG F N G F TL + + F+ + VLGI +T R+ H + + P Sbjct: 14 FGQFFN--GFLF-TLALAIGS--FILAMVLGIFFGAMSTSKRPILRILAHIFVEFYQNTP 68 Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280 LL + +GLP + D ++ P + + + + Y A+ Sbjct: 69 LLVQFVIVFYGLPLIS----------DHTIM-----------IPIYWTAVLCMGLYHGAY 107 Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340 IAE++RSG+ ++P GQMEAA++ G T+ A RL++LPQ R I+PPLT+Q +NL+KN+S Sbjct: 108 IAEVIRSGIQSIPSGQMEAALSQGFTYISAMRLIILPQTFRIILPPLTNQIVNLIKNTST 167 Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF---MNRLNAK 391 + DL+ V + G I L +Y +L +A F M + N K Sbjct: 168 VAIISGVDLMFVTKSWSALNGNYIPAFLGAALLYFALCFPVAQFGRKMEQANKK 221 >gi|110347223|ref|YP_666041.1| polar amino acid ABC transporter, inner membrane subunit [Mesorhizobium sp. BNC1] gi|110283334|gb|ABG61394.1| amino acid ABC transporter membrane protein 2, PAAT family [Chelativorans sp. BNC1] Length = 362 Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 53/135 (39%), Positives = 81/135 (60%), Gaps = 3/135 (2%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 +F+ IAL+ + AA++AE++R GL ++P GQ EAA ALGL + K RL++LPQA+R +I Sbjct: 227 KFVRALIALTIFAAAYLAEVLRGGLQSIPSGQSEAAEALGLGYWKTQRLIILPQAIRIVI 286 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ---TGQAIEIILIWMFIYLSLSIMI 381 P LT+ + ++KN+SL + VG DL+S G ++ + E L IY +L+ Sbjct: 287 PALTNTIIVMIKNTSLVLVVGLFDLISSGKAALSDPAWPAPSTETFLFIGLIYFALAFSF 346 Query: 382 ALFMNRLNAKIALKE 396 A F + L A K Sbjct: 347 ARFADFLERSGAEKR 361 >gi|288905750|ref|YP_003430972.1| amino acid ABC transporter, permease protein [Streptococcus gallolyticus UCN34] gi|306831848|ref|ZP_07465004.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|325978783|ref|YP_004288499.1| putative glutamine transport system permease [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] gi|288732476|emb|CBI14048.1| Putative amino acid ABC transporter, permease protein [Streptococcus gallolyticus UCN34] gi|304426046|gb|EFM29162.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|325178711|emb|CBZ48755.1| putative glutamine transport system permease protein [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] Length = 234 Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 53/168 (31%), Positives = 91/168 (54%), Gaps = 31/168 (18%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 + +FVLG++ ++ +R KA+ +Y+ F + P+ Sbjct: 42 ILAFVLGVIFGAMSSSKNRVL-----KAIARVYVEVFQ------------------NTPL 78 Query: 251 LGQFNFI--------GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302 L QF F+ G + F + + + Y A+IAE++RSG+ AVP+GQ EAA++ Sbjct: 79 LVQFVFVYYGLAIMTNGVIMISTFFTAVLCVGIYHGAYIAEVIRSGIEAVPKGQTEAALS 138 Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 G T+ + L++LPQA+R+I+PPLT+Q +NL+KN+S + AD++ Sbjct: 139 QGFTYSQTMSLIILPQAVRTILPPLTNQVVNLIKNTSTVAIISGADIM 186 Score = 45.4 bits (106), Expect = 0.015, Method: Compositional matrix adjust. Identities = 24/58 (41%), Positives = 36/58 (62%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 GF+ T ++ +I A ++G + GA S N+++ I RVYVEVF+N P LV F+Y Sbjct: 29 GFLYTLGMSICALILAFVLGVIFGAMSSSKNRVLKAIARVYVEVFQNTPLLVQFVFVY 86 >gi|264680313|ref|YP_003280223.1| glutamate/aspartate transporterpermease gltJ [Comamonas testosteroni CNB-2] gi|299532721|ref|ZP_07046109.1| glutamate/aspartate transport systempermease protein gltJ [Comamonas testosteroni S44] gi|262210829|gb|ACY34927.1| glutamate/aspartate transport systempermease protein gltJ [Comamonas testosteroni CNB-2] gi|298719356|gb|EFI60325.1| glutamate/aspartate transport systempermease protein gltJ [Comamonas testosteroni S44] Length = 250 Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 54/134 (40%), Positives = 79/134 (58%), Gaps = 4/134 (2%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P F+ + A+ +T+A IAE VRSG+ A+PRGQ A +A+G T + R VLLP A R I Sbjct: 109 PGFVLVVFAIGFFTSARIAEQVRSGIQALPRGQRYAGMAVGFTTFQTYRYVLLPMAFRII 168 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 IPPLTS+ +N+ KNSS+A AV A+L +T + +EI + L ++ A Sbjct: 169 IPPLTSEAMNVFKNSSVAFAVSVAELTMFAMQAQEETARGVEIYM----AVTGLYVISAF 224 Query: 384 FMNRLNAKIALKEK 397 +NR+ A I + + Sbjct: 225 IINRIMAFIEKRSR 238 Score = 40.0 bits (92), Expect = 0.60, Method: Compositional matrix adjust. Identities = 26/90 (28%), Positives = 46/90 (51%), Gaps = 5/90 (5%) Query: 71 EIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICR 130 E+ Q D +Y ++ + T +A ++ A ++G ++G R ++ WI R Sbjct: 16 EVGQSCFGKNGDITYLDWMMSAWGWTVSVALLSLVIALVLGAVIGTLRTLPDR--PWIVR 73 Query: 131 V---YVEVFRNIPPLVVIFFLYKSVLSVLP 157 + +VE+FRNIP LV +F Y V ++ P Sbjct: 74 LGNAWVELFRNIPLLVQVFIWYHVVPAIFP 103 >gi|312869117|ref|ZP_07729291.1| ABC transporter, permease protein [Lactobacillus oris PB013-T2-3] gi|311095363|gb|EFQ53633.1| ABC transporter, permease protein [Lactobacillus oris PB013-T2-3] Length = 502 Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 61/204 (29%), Positives = 106/204 (51%), Gaps = 22/204 (10%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 +F F+LG + +L S+ H + + YI I G P LV I Y Sbjct: 315 IFGFLLGTLFALMRLSQSKLLH-----GIAICYIE--FIRGTPMLVQIMFVY-------- 359 Query: 251 LGQFNFIGGSTVS--PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308 F G+ + P ++ IA+S + A++AE++RSG+ ++P GQ EAA +LG+T + Sbjct: 360 -----FGIGAIIQSMPALVAGIIAVSVNSGAYVAEVIRSGIQSLPIGQTEAARSLGMTKK 414 Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368 + R ++LPQA+R+I P L ++++ LLK+SSL +G +L+ + T + + + Sbjct: 415 QTFRFIVLPQALRNIWPALGNEFITLLKDSSLVSTIGVGELMYQTQLVQADTYKGVLPLF 474 Query: 369 IWMFIYLSLSIMIALFMNRLNAKI 392 I M IY L+ + +N ++ Sbjct: 475 ITMMIYFILTFTLTRILNYFEGRM 498 >gi|332076441|gb|EGI86904.1| putative ABC-type amino-acid transporter permease protein [Streptococcus pneumoniae GA41301] Length = 137 Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 50/131 (38%), Positives = 78/131 (59%), Gaps = 3/131 (2%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P + + + + Y A+IAE++RSG+ ++P GQMEAA++ G T+ A RL++LPQA R I Sbjct: 3 PIYWTAVLCVGLYHGAYIAEVIRSGIQSIPSGQMEAALSQGFTYISAMRLIILPQAFRII 62 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 +PPLT+Q +NL+KN+S + DL+ V + G I L +Y +L +A Sbjct: 63 LPPLTNQIVNLIKNTSTVAIISGVDLMFVTKSWSALNGNYIPAFLGAALLYFALCFPVAQ 122 Query: 384 F---MNRLNAK 391 F M ++N K Sbjct: 123 FGRKMEQVNKK 133 >gi|309799568|ref|ZP_07693796.1| amino acid ABC transporter, permease protein [Streptococcus infantis SK1302] gi|308116806|gb|EFO54254.1| amino acid ABC transporter, permease protein [Streptococcus infantis SK1302] Length = 227 Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 67/210 (31%), Positives = 117/210 (55%), Gaps = 21/210 (10%) Query: 195 VLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF---GLPTLVLIALKYQL-HFDKPV 250 +LGIVL+ FA R K PL +++ I+ G P +V I + + L H + P Sbjct: 33 ILGIVLA-FAQR---------SKMKPLAWLANVYIWIFRGTPMMVQIMIAFALMHINAPT 82 Query: 251 LGQFNFIGG--STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308 + Q +G S + P I +S + A+++E VR+G+ AVP+GQ+EAA +LG+ + Sbjct: 83 I-QIGVLGVDFSRLIPGI----IIISMNSGAYVSETVRAGINAVPKGQLEAAYSLGIRPK 137 Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368 A R V+LPQA+++I+P L ++++ ++K+SSL A+G +L + T+ T + +L Sbjct: 138 NAMRYVILPQAIKNILPALGNEFITIIKDSSLLSAIGVMELWNGATTVSTTTYLPLTPLL 197 Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 F YL ++ ++ L + ++ EKK Sbjct: 198 FAAFYYLIMTSILTLALKAFENRMGQGEKK 227 >gi|242279192|ref|YP_002991321.1| polar amino acid ABC transporter inner membrane subunit [Desulfovibrio salexigens DSM 2638] gi|242122086|gb|ACS79782.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio salexigens DSM 2638] Length = 337 Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 64/210 (30%), Positives = 114/210 (54%), Gaps = 9/210 (4%) Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL--H 245 K+ + V I+L LF T L+R K + YI LI G P LV + + Y + Sbjct: 135 KVSAIAIVFAIILGLF-TGLARISQNPALKLSAITYIE--LIRGTPLLVQMFIWYFVLGT 191 Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305 +L +++ S + P + + +L+ + A++AEIVR+G+ +V RGQMEAA +LG+ Sbjct: 192 LVNNMLAKYDI---SQIPPLWFGI-ASLAIFAGAYVAEIVRAGIQSVHRGQMEAARSLGM 247 Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365 + A + ++LPQA R I+PPL Q+++++K+SSL + +L ++ + Q E Sbjct: 248 SKYYAMKHIILPQAFRRILPPLAGQFISMIKDSSLLGVIAIRELTKGTREAVSTSLQPFE 307 Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIALK 395 + + +YL L+ ++F+ L K+ + Sbjct: 308 LWFLCALLYLVLTFAFSMFVQYLEKKMVQR 337 >gi|271966004|ref|YP_003340200.1| polar amino acid ABC transporter inner membrane protein [Streptosporangium roseum DSM 43021] gi|270509179|gb|ACZ87457.1| polar amino acid ABC transporter inner membrane protein [Streptosporangium roseum DSM 43021] Length = 304 Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 69/211 (32%), Positives = 105/211 (49%), Gaps = 10/211 (4%) Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247 +I V + LG+VL + + R H L YI F G P LV + Y L F Sbjct: 73 EISVLATALGLVLGVLVA-IMRLAHNPVLSGLATFYIWFFR--GTPVLVQLIFWYNLAFL 129 Query: 248 KPVLG---QFNFIG----GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300 P L F IG + V F S + L AA+ AE VR+G+ AV +GQ EAA Sbjct: 130 FPELVLKVPFTMIGVKWDTNQVMTGFTSAMLGLGLNLAAYFAETVRAGIQAVDKGQTEAA 189 Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 ALG+T K R+++LPQA+R IIPP ++++++LK +SL V DL++ I Sbjct: 190 YALGMTPAKRMRVIVLPQALRIIIPPTGNEFISMLKTTSLVYVVAGHDLMTNASQIYKAN 249 Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 +E++++ Y+ ++ + RL + Sbjct: 250 NLIMELLIVASLWYMLMTAVATFLQGRLERR 280 >gi|258645330|ref|ZP_05732799.1| glutamine ABC transporter, permease protein [Dialister invisus DSM 15470] gi|260402679|gb|EEW96226.1| glutamine ABC transporter, permease protein [Dialister invisus DSM 15470] Length = 212 Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 70/209 (33%), Positives = 112/209 (53%), Gaps = 17/209 (8%) Query: 177 SFPTLTMDTNA--KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234 + P L M +I FS +G + LF ++R K + + +Y I G P Sbjct: 9 ALPILLMGAGVTIEITAFSVAIGFFIGLFVG-IARISQFKILRIMAAVYADC--IRGTPL 65 Query: 235 LVLIALKYQLHFDKPV-LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293 LV I L Y F P+ +GQ V P F++ A + A+++EI R+G+ A+ Sbjct: 66 LVQIFLIY---FALPMAIGQ-------RVEP-FIAAVAACGINSGAYVSEIFRAGIQAID 114 Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353 GQMEA +LGLT + R ++LPQA ++I+PPL ++++ +LK+SSL +GF +L G Sbjct: 115 VGQMEAGRSLGLTWWQTMRFIILPQAFKNILPPLGNEFIAMLKDSSLVSVIGFEELTRRG 174 Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIA 382 II QT + EI + +YL +++ I+ Sbjct: 175 QLIIAQTYGSFEIWMTVAVLYLIMTMAIS 203 >gi|15900516|ref|NP_345120.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae TIGR4] gi|15902577|ref|NP_358127.1| amino acid ABC transporter permease [Streptococcus pneumoniae R6] gi|111656913|ref|ZP_01407737.1| hypothetical protein SpneT_02001840 [Streptococcus pneumoniae TIGR4] gi|116515469|ref|YP_816031.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae D39] gi|14972083|gb|AAK74760.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae TIGR4] gi|15458108|gb|AAK99337.1| ABC transporter membrane-spanning permease - glutamine transport [Streptococcus pneumoniae R6] gi|116076045|gb|ABJ53765.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae D39] Length = 225 Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 50/131 (38%), Positives = 77/131 (58%), Gaps = 3/131 (2%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P + + + + Y A+IAE++RSG+ ++P GQMEAA++ G T+ A RL++LPQA R I Sbjct: 91 PIYWTAVLCVGLYHGAYIAEVIRSGIQSIPSGQMEAALSQGFTYISAMRLIILPQAFRII 150 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 +PPLT+Q +NL+KN+S + DL+ V + G I L +Y +L +A Sbjct: 151 LPPLTNQIVNLIKNTSTVAIISGVDLMFVTKSWSALNGNYIPAFLGAALLYFALCFPVAQ 210 Query: 384 F---MNRLNAK 391 F M + N K Sbjct: 211 FGRKMEQANKK 221 >gi|330819484|ref|YP_004348346.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia gladioli BSR3] gi|327371479|gb|AEA62834.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia gladioli BSR3] Length = 222 Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 44/129 (34%), Positives = 84/129 (65%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P F+ + L Y+AA+++EIVR + +V RGQMEAA ++G++ +A R ++LPQA+ + Sbjct: 87 PAFVCGVLGLGLYSAAYVSEIVRGAIQSVDRGQMEAARSIGMSSGQAMRAIILPQAIVRM 146 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 IPPL ++++ L+KNS+L + DL+ G II+ + +++E+ ++ +YL L+ Sbjct: 147 IPPLGNEFIALIKNSALVSLLTIDDLMHEGQKIISVSYRSLEVYIVIALVYLVLTQTTNF 206 Query: 384 FMNRLNAKI 392 ++R+ ++ Sbjct: 207 ILHRVERRL 215 >gi|170699903|ref|ZP_02890932.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria IOP40-10] gi|170135167|gb|EDT03466.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria IOP40-10] Length = 222 Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 44/129 (34%), Positives = 84/129 (65%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P F+ + L Y+AA+++EIVR + +V RGQMEAA ++G++ +A R ++LPQA+ + Sbjct: 87 PAFVCGMLGLGLYSAAYVSEIVRGAIQSVDRGQMEAARSIGMSSGQAMRAIILPQAIVRM 146 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 IPPL ++++ L+KNS+L + DL+ G II+ + +++E+ ++ +YL L+ Sbjct: 147 IPPLGNEFIALIKNSALVSLLTIHDLMHEGQKIISVSYRSLEVYIVIALVYLVLTQTTNF 206 Query: 384 FMNRLNAKI 392 ++R+ ++ Sbjct: 207 ILHRVERRL 215 >gi|317122403|ref|YP_004102406.1| amino acid ABC transporter membrane protein, PAAT family [Thermaerobacter marianensis DSM 12885] gi|315592383|gb|ADU51679.1| amino acid ABC transporter membrane protein, PAAT family [Thermaerobacter marianensis DSM 12885] Length = 225 Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 55/171 (32%), Positives = 94/171 (54%), Gaps = 11/171 (6%) Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285 T++I G P LV I + Y F + V F + IAL+ + A++AEI+ Sbjct: 66 TWIIRGTPLLVQIYIIY-----------FGLVQYGVVLDPFPAAVIALTVNSGAYLAEII 114 Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345 R+G+ ++P+GQMEAA +LG+++ +A R V+LPQA R +IPP+ ++++ LLK+SSL + Sbjct: 115 RAGIESIPKGQMEAARSLGMSYGQAMRRVILPQAYRRMIPPMVNEFVTLLKDSSLVSIIS 174 Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 +L+ + N T + + F YL ++ + + L K+ E Sbjct: 175 MEELMLYSRQLANATARGMWFFGYAAFYYLVMTTLFTTLGSWLERKLKDYE 225 >gi|332096852|gb|EGJ01842.1| amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Shigella dysenteriae 155-74] Length = 216 Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 42/98 (42%), Positives = 67/98 (68%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+S + L +TAA + E VR+ + ++PRGQ AA+A+GLT +A R VLLP A R I+P Sbjct: 111 FLSSMLCLGLFTAARVCEQVRAAIQSLPRGQKNAALAMGLTLPQAYRYVLLPNAYRVIVP 170 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363 P+TS+ +NL+KNS++A +G D+ + G +++ + A Sbjct: 171 PMTSEMMNLVKNSAIASTIGLVDMAAQAGKLLDYSAHA 208 Score = 40.0 bits (92), Expect = 0.61, Method: Compositional matrix adjust. Identities = 24/77 (31%), Positives = 41/77 (53%) Query: 81 SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140 +++Y I GF T L+ I A ++G+ G R N+ ++ + +YVE+FRN+P Sbjct: 17 GNTTYLGWIWSGFQVTIALSICAWIIAFLVGSFFGILRTVPNRFLSGLGTLYVELFRNVP 76 Query: 141 PLVVIFFLYKSVLSVLP 157 +V F Y + +LP Sbjct: 77 LIVQFFTWYLVIPELLP 93 >gi|297156640|gb|ADI06352.1| amino acid ABC transporter [Streptomyces bingchenggensis BCW-1] Length = 337 Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 61/172 (35%), Positives = 93/172 (54%), Gaps = 12/172 (6%) Query: 231 GLPTLVLIALKYQLHFDKPVLG-----QFNFIGGST---VSPEFMSLYIALSCYTAAFIA 282 G+P LV + Y L P + FI T +SP F ++ + L AA++A Sbjct: 133 GIPVLVQLIFWYNLSALLPRISFGIPFGPEFISAETNTLISPWFAAI-LGLGLNEAAYMA 191 Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342 EIVR GL+ V GQ EAA ALG+ + R ++LPQAMR I+PP SQ +N+LK +SL Sbjct: 192 EIVRGGLLGVDHGQTEAASALGMGRARILRRIVLPQAMRFIVPPTGSQVINMLKATSLVS 251 Query: 343 AVGFADLVSVGGTIINQTGQAIEIILI---WMFIYLSLSIMIALFMNRLNAK 391 + ADL+ +I N+T + I ++++ W + S+ + F+ R A+ Sbjct: 252 VIALADLLYTAQSIYNRTFETIPLLVVACLWYLVMTSVLYVGQSFIERYYAR 303 Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust. Identities = 30/77 (38%), Positives = 40/77 (51%), Gaps = 3/77 (3%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151 G T L M T+ G V GR+S N++++ +C YV FR IP LV + F Y Sbjct: 87 GIATTVELTVVAMAIGTVGGVFVAVGRMSENRVLSTVCGAYVWFFRGIPVLVQLIFWYN- 145 Query: 152 VLSVLPIPDHSIVLPFG 168 LS L +P S +PFG Sbjct: 146 -LSAL-LPRISFGIPFG 160 >gi|148983988|ref|ZP_01817307.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP3-BS71] gi|148998281|ref|ZP_01825750.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP11-BS70] gi|149005717|ref|ZP_01829456.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP18-BS74] gi|168576493|ref|ZP_02722367.1| ABC transporter membrane-spanning permease - glutamine transport [Streptococcus pneumoniae MLV-016] gi|169833891|ref|YP_001694087.1| ABC transporter membrane-spanning permease - glutamine transport [Streptococcus pneumoniae Hungary19A-6] gi|225856307|ref|YP_002737818.1| ABC transporter membrane-spanning permease - glutamine transport [Streptococcus pneumoniae P1031] gi|303260100|ref|ZP_07346073.1| ABC transporter membrane-spanning permease - glutamine transport [Streptococcus pneumoniae SP-BS293] gi|303261284|ref|ZP_07347232.1| ABC transporter membrane-spanning permease - glutamine transport [Streptococcus pneumoniae SP14-BS292] gi|303263949|ref|ZP_07349870.1| ABC transporter membrane-spanning permease - glutamine transport [Streptococcus pneumoniae BS397] gi|303265940|ref|ZP_07351836.1| ABC transporter membrane-spanning permease - glutamine transport [Streptococcus pneumoniae BS457] gi|303268322|ref|ZP_07354119.1| ABC transporter membrane-spanning permease - glutamine transport [Streptococcus pneumoniae BS458] gi|307067224|ref|YP_003876190.1| amino acid ABC transporter permease [Streptococcus pneumoniae AP200] gi|307126807|ref|YP_003878838.1| glutamine ABC transporter membrane-spanning permease [Streptococcus pneumoniae 670-6B] gi|147755924|gb|EDK62968.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP11-BS70] gi|147762657|gb|EDK69617.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP18-BS74] gi|147924135|gb|EDK75247.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP3-BS71] gi|168996393|gb|ACA37005.1| ABC transporter membrane-spanning permease - glutamine transport [Streptococcus pneumoniae Hungary19A-6] gi|183577716|gb|EDT98244.1| ABC transporter membrane-spanning permease - glutamine transport [Streptococcus pneumoniae MLV-016] gi|225724546|gb|ACO20398.1| ABC transporter membrane-spanning permease - glutamine transport [Streptococcus pneumoniae P1031] gi|301799654|emb|CBW32214.1| putative amino acid ABC transporter, permease protein [Streptococcus pneumoniae OXC141] gi|302637418|gb|EFL67905.1| ABC transporter membrane-spanning permease - glutamine transport [Streptococcus pneumoniae SP14-BS292] gi|302638795|gb|EFL69257.1| ABC transporter membrane-spanning permease - glutamine transport [Streptococcus pneumoniae SP-BS293] gi|302642160|gb|EFL72510.1| ABC transporter membrane-spanning permease - glutamine transport [Streptococcus pneumoniae BS458] gi|302644524|gb|EFL74775.1| ABC transporter membrane-spanning permease - glutamine transport [Streptococcus pneumoniae BS457] gi|302646354|gb|EFL76580.1| ABC transporter membrane-spanning permease - glutamine transport [Streptococcus pneumoniae BS397] gi|306408761|gb|ADM84188.1| ABC-type amino acid transport system, permease component [Streptococcus pneumoniae AP200] gi|306483869|gb|ADM90738.1| ABC transporter membrane-spanning permease - glutamine transport [Streptococcus pneumoniae 670-6B] gi|332077038|gb|EGI87500.1| putative ABC-type amino-acid transporter permease protein [Streptococcus pneumoniae GA17545] Length = 225 Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 50/131 (38%), Positives = 77/131 (58%), Gaps = 3/131 (2%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P + + + + Y A+IAE++RSG+ ++P GQMEAA++ G T+ A RL++LPQA R I Sbjct: 91 PIYWTAVLCVGLYHGAYIAEVIRSGIQSIPSGQMEAALSQGFTYISAMRLIILPQAFRII 150 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 +PPLT+Q +NL+KN+S + DL+ V + G I L +Y +L +A Sbjct: 151 LPPLTNQIVNLIKNTSTVAIISGVDLMFVTKSWSALNGNYIPAFLGAALLYFALCFPVAQ 210 Query: 384 F---MNRLNAK 391 F M + N K Sbjct: 211 FGRKMEQANKK 221 Score = 36.2 bits (82), Expect = 9.4, Method: Compositional matrix adjust. Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 5/76 (6%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151 GF+ T LA I A ++G GA S ++ + R++VE ++N P LV ++ Sbjct: 20 GFLFTLALAIGSFILAMVLGIFFGAMSTSKRPILRILARIFVEFYQNTPLLVQFVIVFYG 79 Query: 152 VLSVLP-IPDHSIVLP 166 LP I DH I++P Sbjct: 80 ----LPLISDHIIMIP 91 >gi|294497134|ref|YP_003560834.1| glutamine ABC transporter permease GlnP [Bacillus megaterium QM B1551] gi|294347071|gb|ADE67400.1| glutamine ABC transporter, permease protein GlnP [Bacillus megaterium QM B1551] Length = 216 Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 46/122 (37%), Positives = 78/122 (63%), Gaps = 1/122 (0%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +AL+ + +A I+EI+RSGL ++ +GQ+EAA + GL + + R V+LPQA+R ++PPL SQ Sbjct: 93 VALTVFESAMISEIIRSGLKSIEKGQIEAARSSGLNYYQTLRFVVLPQALRRMVPPLVSQ 152 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ-AIEIILIWMFIYLSLSIMIALFMNRLN 389 +++LLK++SLAV + DL+ I Q + + LI +Y ++ +++ RL Sbjct: 153 FISLLKDTSLAVVIALPDLLHNAQIIYGQKQSYVVPMFLIIAMMYFIVNYALSIIARRLE 212 Query: 390 AK 391 K Sbjct: 213 VK 214 Score = 38.1 bits (87), Expect = 2.3, Method: Compositional matrix adjust. Identities = 22/71 (30%), Positives = 43/71 (60%), Gaps = 2/71 (2%) Query: 79 YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138 Y+ D + + ++ GF T +AF ++ + +IG++VG R + +++ + VE+ RN Sbjct: 7 YSPD--HLSFLMEGFWVTLKVAFISIVLSFLIGSIVGILRYARIPVLSHVLAFVVEIIRN 64 Query: 139 IPPLVVIFFLY 149 +P L++IFF Y Sbjct: 65 LPLLLIIFFTY 75 >gi|227509839|ref|ZP_03939888.1| glutamine ABC superfamily ATP binding cassette transporter, permease protein [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227190763|gb|EEI70830.1| glutamine ABC superfamily ATP binding cassette transporter, permease protein [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 235 Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 66/215 (30%), Positives = 109/215 (50%), Gaps = 31/215 (14%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPTLVLIALKYQL 244 V S++ G++L + ++ G + LPL+ I F FGLP L Sbjct: 32 VLSYIFGVILGVTRYVQIKYLSAIVGFVIDIIRNLPLILIIFFTYFGLPHL--------- 82 Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304 G P + S+ IA++ + AA +AEIVR+G+ ++P GQME A A G Sbjct: 83 --------------GFKPDPIWASV-IAMAVFEAAMVAEIVRAGIASIPTGQMEGARANG 127 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ-TGQA 363 L++ +A ++LPQA+R++IP + SQ+++L+K++SLA + DL++ I Q T Sbjct: 128 LSYWQALWYIVLPQAIRNMIPAIVSQFISLVKDTSLATIIVLPDLMNHAQIIYGQNTNYT 187 Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 I + L +Y + ++LF L +I KK Sbjct: 188 IPMFLALAVMYFIVCYSLSLFSKYLEKRIGGGNKK 222 >gi|71064881|ref|YP_263608.1| ABC glutamate/aspartate transporter, inner membrane subunit GltJ [Psychrobacter arcticus 273-4] gi|71037866|gb|AAZ18174.1| ABC glutamate/aspartate transporter, inner membrane subunit GltJ [Psychrobacter arcticus 273-4] Length = 248 Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 62/186 (33%), Positives = 101/186 (54%), Gaps = 4/186 (2%) Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH--FDKPVLGQFNFIGGSTVSPEF 266 R KT +A+ Y++ F +P LV + + + + P + ++ + S + Sbjct: 54 RTLPNKTARAIGTTYVTFFR--NIPLLVQLFFWFYIAPGWLTPSIQEWWYKDLSPNTSAM 111 Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326 +S I L +TAA I E VR+G+ ++P+GQ+ AA ALG + +A + VLLPQA R I+PP Sbjct: 112 LSASIGLGLFTAARIVEQVRTGIESLPKGQINAAYALGFSIPQAYKEVLLPQAFRIILPP 171 Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386 L+S+ N KN+S+A VG +L+S TI T ++EI IYL ++ + M Sbjct: 172 LSSELTNCFKNASVASLVGVMELISQTKTISEYTQNSLEIYTYATIIYLVFNLSLIAIMG 231 Query: 387 RLNAKI 392 + K+ Sbjct: 232 LIERKL 237 >gi|164687608|ref|ZP_02211636.1| hypothetical protein CLOBAR_01249 [Clostridium bartlettii DSM 16795] gi|164603382|gb|EDQ96847.1| hypothetical protein CLOBAR_01249 [Clostridium bartlettii DSM 16795] Length = 223 Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 63/210 (30%), Positives = 115/210 (54%), Gaps = 25/210 (11%) Query: 191 VFSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLI-FGLPTLVLIALKYQ 243 V FVLG+++ L +L + + + PL ++ F+I FGLP Q Sbjct: 29 VVGFVLGLLICLMKMSNFKVLKLLSSAYVQILRGTPL-FVQVFIIYFGLP---------Q 78 Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 L D P +G +S +F++ ALS ++A+IAEI RSG+ +V +GQMEA+ +L Sbjct: 79 LGIDFPDIG--------PISSKFIAGAFALSINSSAYIAEIFRSGIQSVDKGQMEASRSL 130 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363 GL + R V++PQA+++++P L ++++ L+K SS+ +G +++ G ++ + Sbjct: 131 GLGYADTMRFVIVPQAIKNVLPALANEFITLVKESSVLSVIGTQEIMFKAGIVVTAVYRP 190 Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIA 393 +E + IYL L+ +++ + L K+A Sbjct: 191 MEPYIAAAVIYLVLTTILSKLVGILEKKLA 220 >gi|295702500|ref|YP_003595575.1| glutamine ABC transporter permease GlnP [Bacillus megaterium DSM 319] gi|294800159|gb|ADF37225.1| glutamine ABC transporter, permease protein GlnP [Bacillus megaterium DSM 319] Length = 216 Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 46/122 (37%), Positives = 78/122 (63%), Gaps = 1/122 (0%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +AL+ + +A I+EI+RSGL ++ +GQ+EAA + GL + + R V+LPQA+R ++PPL SQ Sbjct: 93 VALTVFESAMISEIIRSGLKSIEKGQIEAARSSGLNYYQTLRFVVLPQALRRMVPPLVSQ 152 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ-AIEIILIWMFIYLSLSIMIALFMNRLN 389 +++LLK++SLAV + DL+ I Q + + LI +Y ++ +++ RL Sbjct: 153 FISLLKDTSLAVVIALPDLLHNAQIIYGQKQSYVVPMFLIIAMMYFIVNYALSIIARRLE 212 Query: 390 AK 391 K Sbjct: 213 VK 214 Score = 38.1 bits (87), Expect = 2.4, Method: Compositional matrix adjust. Identities = 22/71 (30%), Positives = 43/71 (60%), Gaps = 2/71 (2%) Query: 79 YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138 Y+ D + + ++ GF T +AF ++ + +IG++VG R + +++ + VE+ RN Sbjct: 7 YSPD--HLSFLMEGFWVTLKVAFISIVLSFLIGSIVGILRYARIPVLSHVLAFIVEIIRN 64 Query: 139 IPPLVVIFFLY 149 +P L++IFF Y Sbjct: 65 LPLLLIIFFTY 75 >gi|238026229|ref|YP_002910460.1| hypothetical protein bglu_1g05600 [Burkholderia glumae BGR1] gi|237875423|gb|ACR27756.1| Hypothetical protein bglu_1g05600 [Burkholderia glumae BGR1] Length = 246 Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 45/129 (34%), Positives = 76/129 (58%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + + L +T A + E VRSG+ A+P+GQ A +A+G T + R VLLP A R I+P Sbjct: 111 FTASVVCLGLFTGARVCEQVRSGIAALPKGQRAAGLAMGFTEWQTYRFVLLPVAYRIIVP 170 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PLTS++LN+ KNS++A +G DL + +++ T Q E + Y+ +++++ M Sbjct: 171 PLTSEFLNIFKNSAVASTIGLLDLSAQARQLVDYTAQTYESFIAVTLAYVIINLVVMALM 230 Query: 386 NRLNAKIAL 394 + ++ L Sbjct: 231 RWIESRTRL 239 Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust. Identities = 24/77 (31%), Positives = 41/77 (53%) Query: 81 SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140 ++Y +L GF T ++ + A ++G+L G R N+ ++ + +YV +FRNIP Sbjct: 18 EPTTYLGWLLSGFWVTIKVSLVAWVIALVVGSLFGVLRTVPNRWLSALGTLYVSIFRNIP 77 Query: 141 PLVVIFFLYKSVLSVLP 157 +V F Y V +LP Sbjct: 78 LIVQFFVWYLVVPELLP 94 >gi|188583629|ref|YP_001927074.1| polar amino acid ABC transporter inner hypothetical protein [Methylobacterium populi BJ001] gi|179347127|gb|ACB82539.1| polar amino acid ABC transporter, inner membrane subunit [Methylobacterium populi BJ001] Length = 230 Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 66/217 (30%), Positives = 110/217 (50%), Gaps = 22/217 (10%) Query: 194 FVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV--------------LIA 239 F G+V +L T L+ G L LL +S G+P L L+ Sbjct: 18 FAQGMVFTLTLTALAASGGLVLGTGLALLRLS-----GVPGLTHAAKLYVELMRALPLVL 72 Query: 240 LKYQLHFDKPVLGQFNFIGGST--VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQM 297 + + +F P LG + IG T F S I + + AA+ +EIVR+G+ ++P GQ Sbjct: 73 VIFWFYFLVPYLGAWA-IGSDTPIQVGAFASALITFTLFEAAYFSEIVRAGIQSIPEGQG 131 Query: 298 EAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII 357 AA ALG++ +A RLV+LPQAMR+++P L +Q + L +++SL + D + + Sbjct: 132 AAARALGMSPAQAMRLVVLPQAMRNMLPLLLTQTIVLFQDTSLVYVLSLTDFLGAASKVA 191 Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394 + G+ +E+ L +Y ++ +L + RL A+ A+ Sbjct: 192 QRDGRLVEMYLFAALVYFAICFAASLLVRRLQARTAI 228 >gi|315302221|ref|ZP_07873138.1| glutamine ABC transporter, permease/substrate-binding protein [Listeria ivanovii FSL F6-596] gi|313629411|gb|EFR97627.1| glutamine ABC transporter, permease/substrate-binding protein [Listeria ivanovii FSL F6-596] Length = 480 Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 57/176 (32%), Positives = 95/176 (53%), Gaps = 23/176 (13%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 + PL+ + F FG+P AL +++ P F++ IALS Sbjct: 325 RGTPLIVQAFFFYFGIPA----ALDFRM-------------------PVFLAGVIALSLN 361 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 A++ EIVR G+ +V +GQMEAA +LGL H+KA V+LPQA+R +IP +Q++ LK Sbjct: 362 AGAYMVEIVRGGIQSVDKGQMEAARSLGLPHKKAMLKVVLPQAIRMMIPSFINQFVITLK 421 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 ++S+ A+G +L G I+ +T ++ LI +YL + ++ +RL ++ Sbjct: 422 DTSIMSAIGLVELTQSGKIIMARTFESTWTWLIIGIMYLIVITILTKVSDRLERRV 477 Score = 40.4 bits (93), Expect = 0.47, Method: Compositional matrix adjust. Identities = 25/62 (40%), Positives = 35/62 (56%) Query: 88 AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147 A+L G T LA +I A IIG G ++S +K++ I VYV++FR P +V FF Sbjct: 276 ALLAGMWLTIRLAVVSLIIAFIIGITFGFMKVSNSKILRGIATVYVDIFRGTPLIVQAFF 335 Query: 148 LY 149 Y Sbjct: 336 FY 337 >gi|242238547|ref|YP_002986728.1| polar amino acid ABC transporter inner membrane subunit [Dickeya dadantii Ech703] gi|242130604|gb|ACS84906.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya dadantii Ech703] Length = 224 Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 46/127 (36%), Positives = 79/127 (62%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 +S +A S + AA+ +EI+R+G+ ++ RGQ AA+ALG+TH ++ +LV+LPQA R++I Sbjct: 96 RLVSAMVAFSLFEAAYYSEIIRAGIQSISRGQASAALALGMTHWQSMQLVILPQAFRAMI 155 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 P L +Q + L +++SL + AD TI + G +E+IL +Y +SI ++ Sbjct: 156 PLLLTQGIVLFQDTSLVYVLSLADFFRTASTIGERDGTQVEMILFAGAVYFVISISASML 215 Query: 385 MNRLNAK 391 +N L + Sbjct: 216 VNYLKRR 222 Score = 40.0 bits (92), Expect = 0.69, Method: Compositional matrix adjust. Identities = 22/61 (36%), Positives = 36/61 (59%), Gaps = 7/61 (11%) Query: 111 GTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY-------KSVLSVLPIPDHSI 163 GT++ RLS K V+W R+YV +FR+IP ++V+ + Y ++VL + P D + Sbjct: 38 GTVLAVMRLSPVKPVSWFARIYVNLFRSIPLVMVLLWFYLIVPSFLQNVLGLSPKTDIRL 97 Query: 164 V 164 V Sbjct: 98 V 98 >gi|317491135|ref|ZP_07949571.1| inner membrane binding protein [Enterobacteriaceae bacterium 9_2_54FAA] gi|316920682|gb|EFV42005.1| inner membrane binding protein [Enterobacteriaceae bacterium 9_2_54FAA] Length = 224 Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 45/127 (35%), Positives = 79/127 (62%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 +S +A S + AA+ +EI+R+G+ +V +GQ A++ALG+TH ++ RLV+LPQA R+++ Sbjct: 96 RLISAMVAFSLFEAAYYSEIIRAGIQSVSKGQSGASLALGMTHWQSMRLVILPQAFRAMV 155 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 P L +Q + L +++SL + AD TI + G +E+IL F+Y +S+ + Sbjct: 156 PLLLTQGIVLFQDTSLVYVLSLADFFRTASTIGERDGTQVEMILFAGFVYFIISLAASAL 215 Query: 385 MNRLNAK 391 +N L + Sbjct: 216 VNYLKKR 222 Score = 41.2 bits (95), Expect = 0.31, Method: Compositional matrix adjust. Identities = 22/65 (33%), Positives = 39/65 (60%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151 G V T + ++ I GT++ RLS+ KL++W +YV +FR++P ++V+ + Y Sbjct: 19 GMVITLKITLIAVVFGIIWGTILAVMRLSSFKLISWFATLYVNLFRSVPLVMVLLWFYLV 78 Query: 152 VLSVL 156 V S+L Sbjct: 79 VPSLL 83 >gi|251790177|ref|YP_003004898.1| polar amino acid ABC transporter inner membrane subunit [Dickeya zeae Ech1591] gi|247538798|gb|ACT07419.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya zeae Ech1591] Length = 256 Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 76/240 (31%), Positives = 124/240 (51%), Gaps = 21/240 (8%) Query: 160 DHSIVLPFGMFLNNR-GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKA 218 DHS++L G + N G TL + A VFSF LG+++ L RLS Sbjct: 10 DHSMLLLMGQYPNGPLGGVLCTLLISLLA--VVFSFPLGVLIGL--ARLSPWRG------ 59 Query: 219 LPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTA 278 L + +T ++ L + L+ + + +F P+L IG +T F ++ L Y + Sbjct: 60 --LRWAATAWVYTLRGIPLMMVVFWTYFCVPLL-----IGQNTSG--FSTMLCTLVIYES 110 Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338 A+IAEIVR G+ A+P GQ EA+ ALG+++ K RLV+LPQA+ + +P L SQ ++++K+S Sbjct: 111 AYIAEIVRGGIQALPHGQYEASRALGMSYLKTLRLVVLPQALFNSLPSLVSQLVSIIKDS 170 Query: 339 SLAVAVGFADLVSVGGTIINQ-TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 +L + +L + NQ + ++ I Y + + NRL + IA K + Sbjct: 171 TLGYVINVPELTYAANQVSNQLLTKPFQVFAIVALSYYIICFSLTWLANRLESYIANKRR 230 >gi|217965060|ref|YP_002350738.1| glutamine ABC transporter, permease/substrate-binding protein [Listeria monocytogenes HCC23] gi|290892961|ref|ZP_06555951.1| glutamine ABC transporter [Listeria monocytogenes FSL J2-071] gi|217334330|gb|ACK40124.1| glutamine ABC transporter, permease/substrate-binding protein [Listeria monocytogenes HCC23] gi|290557537|gb|EFD91061.1| glutamine ABC transporter [Listeria monocytogenes FSL J2-071] gi|307570380|emb|CAR83559.1| glutamine ABC transporter, permease/substrate-binding protein [Listeria monocytogenes L99] Length = 480 Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 57/176 (32%), Positives = 95/176 (53%), Gaps = 23/176 (13%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 + PL+ + F FG+P AL +++ P F++ IALS Sbjct: 325 RGTPLIVQAFFFYFGIPA----ALDFRM-------------------PVFLAGVIALSLN 361 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 A++ EIVR G+ +V +GQMEAA +LGL H+KA V+LPQA+R +IP +Q++ LK Sbjct: 362 AGAYMVEIVRGGIQSVDKGQMEAARSLGLPHKKAMMKVVLPQAIRMMIPSFINQFVITLK 421 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 ++S+ A+G +L G I+ +T ++ LI +YL + ++ +RL ++ Sbjct: 422 DTSIMSAIGLVELTQSGKIIMARTFESTWTWLIIGIMYLIVITILTKISDRLERRL 477 Score = 40.0 bits (92), Expect = 0.69, Method: Compositional matrix adjust. Identities = 25/62 (40%), Positives = 35/62 (56%) Query: 88 AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147 A+L G T LA +I A IIG G ++S +K++ I VYV++FR P +V FF Sbjct: 276 ALLSGLWLTIRLAVVSLIIAFIIGITFGFMKVSNSKILRGIATVYVDIFRGTPLIVQAFF 335 Query: 148 LY 149 Y Sbjct: 336 FY 337 >gi|188591217|ref|YP_001795817.1| glutamate/aspartate transporter; ABC superfamily, membrane component [Cupriavidus taiwanensis LMG 19424] gi|170938111|emb|CAP63097.1| glutamate/aspartate transport protein; ABC superfamily, membrane component [Cupriavidus taiwanensis LMG 19424] Length = 242 Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 45/129 (34%), Positives = 79/129 (61%) Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322 + +F++ + L +TAA + E VRSG+ ++ RGQ A +A+G T + R VLLP A R Sbjct: 104 AQQFLAAMLCLGTFTAARVCEQVRSGINSLARGQKNAGLAMGFTLPQTYRHVLLPMAFRV 163 Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382 I+PPLTS++LN+ KNS++A +G +L + G +++ T + E + +Y +++ + Sbjct: 164 IVPPLTSEFLNIFKNSAVASTIGLLELAAQGRQLVDYTARPYESFIAVTLMYALINVTVM 223 Query: 383 LFMNRLNAK 391 L M + A+ Sbjct: 224 LLMRWVEAR 232 Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust. Identities = 28/77 (36%), Positives = 42/77 (54%) Query: 81 SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140 + +Y ++ G T L S + A +IG+++G R NK +A I YVE+FRNIP Sbjct: 16 QNETYLDWMISGLKVTLALGLSSWVIALVIGSVLGVLRTVPNKWLAGIAATYVEIFRNIP 75 Query: 141 PLVVIFFLYKSVLSVLP 157 LV +F Y + +LP Sbjct: 76 LLVQLFIWYFVMPELLP 92 >gi|157363347|ref|YP_001470114.1| polar amino acid ABC transporter, inner membrane subunit [Thermotoga lettingae TMO] gi|157313951|gb|ABV33050.1| polar amino acid ABC transporter, inner membrane subunit [Thermotoga lettingae TMO] Length = 239 Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 81/250 (32%), Positives = 129/250 (51%), Gaps = 31/250 (12%) Query: 148 LYKSVLSVLPIPDHSIVLPFG-MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATR 206 +Y ++ V P D ++VL + +F+N GL +TM + + SF +GIV +L R Sbjct: 17 IYLAISRVYPF-DWTVVLKYRRVFIN--GL---VMTMSLSGFSLLISFAVGIVFALM-RR 69 Query: 207 LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP-- 264 S F E +LY+ F P LV+I L Y G ++ P Sbjct: 70 SSGIFRE-----FAILYV--FFFRNTPLLVVILLTYY--------------GLGSIIPFD 108 Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 F + + LS + A+IAEIVRSGL AV +G++EAA +LGLT + V PQA+R + Sbjct: 109 RFWAAVMGLSAFEGAYIAEIVRSGLDAVDKGELEAAFSLGLTKSEVFFYVHFPQAIRISL 168 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 P L Q ++L+K+SSLA + A+L G + QT + E L Y++++ +++L Sbjct: 169 PALIGQSISLVKDSSLASVIALAELTMTGRQVGTQTLASFESYLTIAVFYVAVTSILSLI 228 Query: 385 MNRLNAKIAL 394 + L ++A+ Sbjct: 229 GHWLERRLAI 238 >gi|224500426|ref|ZP_03668775.1| glutamine ABC transporter, permease/substrate-binding protein [Listeria monocytogenes Finland 1988] gi|254827790|ref|ZP_05232477.1| glutamine ABC transporter [Listeria monocytogenes FSL N3-165] gi|258600171|gb|EEW13496.1| glutamine ABC transporter [Listeria monocytogenes FSL N3-165] Length = 480 Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 57/176 (32%), Positives = 95/176 (53%), Gaps = 23/176 (13%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 + PL+ + F FG+P AL +++ P F++ IALS Sbjct: 325 RGTPLIVQAFFFYFGIPA----ALDFRM-------------------PVFLAGVIALSLN 361 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 A++ EIVR G+ +V +GQMEAA +LGL H+KA V+LPQA+R +IP +Q++ LK Sbjct: 362 AGAYMVEIVRGGIQSVDKGQMEAARSLGLPHKKAMMKVVLPQAIRMMIPSFINQFVITLK 421 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 ++S+ A+G +L G I+ +T ++ LI +YL + ++ +RL ++ Sbjct: 422 DTSIMSAIGLVELTQSGKIIMARTFESTWTWLIIGIMYLIVITILTKISDRLERRL 477 Score = 40.0 bits (92), Expect = 0.67, Method: Compositional matrix adjust. Identities = 25/62 (40%), Positives = 35/62 (56%) Query: 88 AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147 A+L G T LA +I A IIG G ++S +K++ I VYV++FR P +V FF Sbjct: 276 ALLSGLWLTIRLAVVSLIIAFIIGITFGFMKVSNSKILRGIATVYVDIFRGTPLIVQAFF 335 Query: 148 LY 149 Y Sbjct: 336 FY 337 >gi|323492220|ref|ZP_08097378.1| ABC transporter ATP-binding/permease protein [Vibrio brasiliensis LMG 20546] gi|323313533|gb|EGA66639.1| ABC transporter ATP-binding/permease protein [Vibrio brasiliensis LMG 20546] Length = 264 Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 70/225 (31%), Positives = 118/225 (52%), Gaps = 19/225 (8%) Query: 158 IPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGK 217 +PD+ + G + L +T+ +A F+ ++G L+ A +LS + G+ Sbjct: 42 VPDYILFFEDGEWWPAELLEGLLVTIKISALSLAFTLLIG--LTTAALKLSDSW---VGR 96 Query: 218 ALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT 277 L +YI +I P LV I L Y + PV+G F + +ALS + Sbjct: 97 GLANIYIE--VIRNTPLLVQIYLLYFIF--GPVIGL----------DRFATAVLALSLFQ 142 Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 A+ AE+ R GL ++P+GQ EAA +LGL+ V+LPQ ++ +PPLT++ ++L+KN Sbjct: 143 GAYTAEVFRGGLNSIPKGQFEAAKSLGLSRFFTFYDVILPQLLQRTLPPLTNEVVSLIKN 202 Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382 SS+ + DL + G I+++T EI IYL+L++M++ Sbjct: 203 SSIVSVMAIFDLTTEGRNIVSETAMPFEIWFTVAAIYLTLTLMLS 247 >gi|46907078|ref|YP_013467.1| glutamine ABC transporter, permease/substrate-binding protein [Listeria monocytogenes str. 4b F2365] gi|224503184|ref|ZP_03671491.1| glutamine ABC transporter, permease/substrate-binding protein [Listeria monocytogenes FSL R2-561] gi|254832188|ref|ZP_05236843.1| glutamine ABC transporter, permease/substrate-binding protein [Listeria monocytogenes 10403S] gi|255520210|ref|ZP_05387447.1| glutamine ABC transporter, permease/substrate-binding protein [Listeria monocytogenes FSL J1-175] gi|284801176|ref|YP_003413041.1| hypothetical protein LM5578_0926 [Listeria monocytogenes 08-5578] gi|284994318|ref|YP_003416086.1| hypothetical protein LM5923_0880 [Listeria monocytogenes 08-5923] gi|46880345|gb|AAT03644.1| glutamine ABC transporter, permease/substrate-binding protein [Listeria monocytogenes serotype 4b str. F2365] gi|284056738|gb|ADB67679.1| hypothetical protein LM5578_0926 [Listeria monocytogenes 08-5578] gi|284059785|gb|ADB70724.1| hypothetical protein LM5923_0880 [Listeria monocytogenes 08-5923] Length = 480 Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 57/176 (32%), Positives = 95/176 (53%), Gaps = 23/176 (13%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 + PL+ + F FG+P AL +++ P F++ IALS Sbjct: 325 RGTPLIVQAFFFYFGIPA----ALDFRM-------------------PVFLAGVIALSLN 361 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 A++ EIVR G+ +V +GQMEAA +LGL H+KA V+LPQA+R +IP +Q++ LK Sbjct: 362 AGAYMVEIVRGGIQSVDKGQMEAARSLGLPHKKAMMKVVLPQAIRMMIPSFINQFVITLK 421 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 ++S+ A+G +L G I+ +T ++ LI +YL + ++ +RL ++ Sbjct: 422 DTSIMSAIGLVELTQSGKIIMARTFESTWTWLIIGIMYLIVITILTKISDRLERRL 477 Score = 40.0 bits (92), Expect = 0.68, Method: Compositional matrix adjust. Identities = 25/62 (40%), Positives = 35/62 (56%) Query: 88 AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147 A+L G T LA +I A IIG G ++S +K++ I VYV++FR P +V FF Sbjct: 276 ALLSGLWLTIRLAVVSLIIAFIIGITFGFMKVSNSKILRGIATVYVDIFRGTPLIVQAFF 335 Query: 148 LY 149 Y Sbjct: 336 FY 337 >gi|325507790|gb|ADZ19426.1| Amino acid (glutamine) ABC transporter, permease component [Clostridium acetobutylicum EA 2018] Length = 215 Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 44/124 (35%), Positives = 79/124 (63%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + LS + A+IAEI+R G+IA+ +GQ EA+ ALG T+ + R V+LPQA+R IIPP+ ++ Sbjct: 91 LGLSLNSGAYIAEIIRGGIIAIDKGQFEASKALGFTYGQTMRKVILPQAVRVIIPPMGNE 150 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++ L+K++SL + +L+ +++ +G A+ +I YL L+ + +R+ Sbjct: 151 FIALIKDTSLVSVITMEELLRKAQLLVSSSGDAVTPYVITGVFYLVLTTVFTFLFSRIEK 210 Query: 391 KIAL 394 K++L Sbjct: 211 KLSL 214 >gi|47092054|ref|ZP_00229847.1| glutamine ABC transporter, permease/substrate-binding protein [Listeria monocytogenes str. 4b H7858] gi|226223465|ref|YP_002757572.1| Glutamine ABC transporter (binding and transport protein) [Listeria monocytogenes Clip81459] gi|254823885|ref|ZP_05228886.1| glutamine ABC transporter [Listeria monocytogenes FSL J1-194] gi|254852338|ref|ZP_05241686.1| glutamine ABC transporter [Listeria monocytogenes FSL R2-503] gi|254931228|ref|ZP_05264587.1| glutamine ABC transporter [Listeria monocytogenes HPB2262] gi|254993068|ref|ZP_05275258.1| Glutamine ABC transporter (binding and transport protein) [Listeria monocytogenes FSL J2-064] gi|300765789|ref|ZP_07075764.1| glutamine ABC transporter, permease/substrate-binding protein [Listeria monocytogenes FSL N1-017] gi|47019494|gb|EAL10234.1| glutamine ABC transporter, permease/substrate-binding protein [Listeria monocytogenes str. 4b H7858] gi|225875927|emb|CAS04631.1| Putative Glutamine ABC transporter (binding and transport protein) [Listeria monocytogenes serotype 4b str. CLIP 80459] gi|258605645|gb|EEW18253.1| glutamine ABC transporter [Listeria monocytogenes FSL R2-503] gi|293582776|gb|EFF94808.1| glutamine ABC transporter [Listeria monocytogenes HPB2262] gi|293593110|gb|EFG00871.1| glutamine ABC transporter [Listeria monocytogenes FSL J1-194] gi|300513483|gb|EFK40555.1| glutamine ABC transporter, permease/substrate-binding protein [Listeria monocytogenes FSL N1-017] gi|328467121|gb|EGF38211.1| Glutamine ABC transporter (binding and transport protein) [Listeria monocytogenes 1816] gi|328475546|gb|EGF46305.1| Glutamine ABC transporter (binding and transport protein) [Listeria monocytogenes 220] Length = 480 Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 57/176 (32%), Positives = 95/176 (53%), Gaps = 23/176 (13%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 + PL+ + F FG+P AL +++ P F++ IALS Sbjct: 325 RGTPLIVQAFFFYFGIPA----ALDFRM-------------------PVFLAGVIALSLN 361 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 A++ EIVR G+ +V +GQMEAA +LGL H+KA V+LPQA+R +IP +Q++ LK Sbjct: 362 AGAYMVEIVRGGIQSVDKGQMEAARSLGLPHKKAMMKVVLPQAIRMMIPSFINQFVITLK 421 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 ++S+ A+G +L G I+ +T ++ LI +YL + ++ +RL ++ Sbjct: 422 DTSIMSAIGLVELTQSGKIIMARTFESTWTWLIIGIMYLIVITILTKISDRLERRL 477 Score = 40.0 bits (92), Expect = 0.68, Method: Compositional matrix adjust. Identities = 25/62 (40%), Positives = 35/62 (56%) Query: 88 AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147 A+L G T LA +I A IIG G ++S +K++ I VYV++FR P +V FF Sbjct: 276 ALLSGLWLTIRLAVVSLIIAFIIGITFGFMKVSNSKILRGIATVYVDIFRGTPLIVQAFF 335 Query: 148 LY 149 Y Sbjct: 336 FY 337 >gi|317406132|gb|EFV86389.1| polar amino acid transport system permease [Achromobacter xylosoxidans C54] Length = 222 Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 46/129 (35%), Positives = 81/129 (62%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P F + L Y+ A+++EIVR + +V RGQ EAA +LG++ +A R+++LPQA+ + Sbjct: 87 PAFACGVLGLGMYSGAYVSEIVRGAIQSVDRGQTEAARSLGMSSGQAMRIIILPQAVVRM 146 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 IPPL ++++ L+KNS+L + DL+ G II+ + +++E L+ IYL L+ L Sbjct: 147 IPPLGNEFIALIKNSALVSLLTIHDLMHEGQKIISVSYRSLETYLVVALIYLVLTTAAML 206 Query: 384 FMNRLNAKI 392 + R+ ++ Sbjct: 207 ILRRIEQRL 215 Score = 37.7 bits (86), Expect = 3.0, Method: Compositional matrix adjust. Identities = 35/151 (23%), Positives = 67/151 (44%), Gaps = 17/151 (11%) Query: 88 AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAW-ICRVYVEVFRNIPPLVVIF 146 A++ G V T + ++ +IG LVG GRL+ + + + +C VY+ FR P LV +F Sbjct: 14 ALVRGAVVTIEVTAGALLLGCVIGLLVGVGRLNPQRSIIYNLCSVYLLFFRGTPLLVQLF 73 Query: 147 FLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL--FA 204 + +P + LP + L + + +V V G + S+ Sbjct: 74 IWF------FGLPQFGVTLP--------AFACGVLGLGMYSGAYVSEIVRGAIQSVDRGQ 119 Query: 205 TRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235 T +R +G+A+ ++ + ++ +P L Sbjct: 120 TEAARSLGMSSGQAMRIIILPQAVVRMIPPL 150 >gi|308174444|ref|YP_003921149.1| glutamine ABC transporter permease [Bacillus amyloliquefaciens DSM 7] gi|307607308|emb|CBI43679.1| glutamine ABC transporter (permease) [Bacillus amyloliquefaciens DSM 7] Length = 214 Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 55/130 (42%), Positives = 81/130 (62%), Gaps = 10/130 (7%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + IAL+ YT+AFIAE +R+G+ V +GQMEAA + G T+ +A R V+LPQA++ +IP Sbjct: 86 FQAGTIALTIYTSAFIAEAIRAGIQTVSKGQMEAARSSGFTYSQAMRYVILPQAVKIVIP 145 Query: 326 PLTSQYLNLLKNSS-LAVAVGF-----ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379 PL +Q+LNL+KNSS L V G ADLVS ++ + + L ++ + + LSI Sbjct: 146 PLGNQFLNLVKNSSILGVVAGLDLMYQADLVSSSTLVVFD----VFVALFYLMLTIPLSI 201 Query: 380 MIALFMNRLN 389 + RL Sbjct: 202 GVHYLERRLG 211 Score = 43.5 bits (101), Expect = 0.066, Method: Compositional matrix adjust. Identities = 21/58 (36%), Positives = 33/58 (56%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 GF++T +F + + +G L+ R++A K + WI YVE RNIP L++ F Y Sbjct: 16 GFLHTLLASFIALAGSFALGVLIAVMRITAFKPIQWIGTAYVEFIRNIPLLLITFVFY 73 >gi|238026230|ref|YP_002910461.1| glutamate/aspartate transport system permease [Burkholderia glumae BGR1] gi|237875424|gb|ACR27757.1| Glutamate/aspartate transport system permease protein [Burkholderia glumae BGR1] Length = 225 Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 47/132 (35%), Positives = 79/132 (59%) Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320 T+ S IA S + AA+ +EI+R+G+ AVPRGQ+ AA ALG+ + +A RLV+LPQA Sbjct: 92 TIDIRLASAMIAFSLFEAAYYSEIIRAGIQAVPRGQVNAAFALGMGYGQAMRLVILPQAF 151 Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380 R+++P L +Q + L +++SL + AD I ++ G ++E+IL Y + ++ Sbjct: 152 RAMVPLLLTQAIVLFQDTSLVYVISLADFFRTATNIGDRDGTSVEMILFAGACYFVVCVL 211 Query: 381 IALFMNRLNAKI 392 + + L K+ Sbjct: 212 ASALVKGLQKKV 223 >gi|47094853|ref|ZP_00232467.1| glutamine ABC transporter, permease/substrate-binding protein [Listeria monocytogenes str. 1/2a F6854] gi|254898981|ref|ZP_05258905.1| glutamine ABC transporter, permease/substrate-binding protein [Listeria monocytogenes J0161] gi|254911531|ref|ZP_05261543.1| glutamine ABC transporter [Listeria monocytogenes J2818] gi|254935857|ref|ZP_05267554.1| glutamine ABC transporter [Listeria monocytogenes F6900] gi|47016735|gb|EAL07654.1| glutamine ABC transporter, permease/substrate-binding protein [Listeria monocytogenes str. 1/2a F6854] gi|258608445|gb|EEW21053.1| glutamine ABC transporter [Listeria monocytogenes F6900] gi|293589477|gb|EFF97811.1| glutamine ABC transporter [Listeria monocytogenes J2818] Length = 480 Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 57/176 (32%), Positives = 95/176 (53%), Gaps = 23/176 (13%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 + PL+ + F FG+P AL +++ P F++ IALS Sbjct: 325 RGTPLIVQAFFFYFGIPA----ALDFRM-------------------PVFLAGVIALSLN 361 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 A++ EIVR G+ +V +GQMEAA +LGL H+KA V+LPQA+R +IP +Q++ LK Sbjct: 362 AGAYMVEIVRGGIQSVDKGQMEAARSLGLPHKKAMMKVVLPQAIRMMIPSFINQFVITLK 421 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 ++S+ A+G +L G I+ +T ++ LI +YL + ++ +RL ++ Sbjct: 422 DTSIMSAIGLVELTQSGKIIMARTFESTWTWLIIGIMYLIVITILTKISDRLERRL 477 Score = 40.0 bits (92), Expect = 0.65, Method: Compositional matrix adjust. Identities = 25/62 (40%), Positives = 35/62 (56%) Query: 88 AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147 A+L G T LA +I A IIG G ++S +K++ I VYV++FR P +V FF Sbjct: 276 ALLSGLWLTIRLAVVSLIIAFIIGITFGFMKVSNSKILRGIATVYVDIFRGTPLIVQAFF 335 Query: 148 LY 149 Y Sbjct: 336 FY 337 >gi|26987022|ref|NP_742447.1| polar amino acid ABC transporter inner membrane subunit [Pseudomonas putida KT2440] gi|24981641|gb|AAN65911.1|AE016219_4 amino acid ABC transporter, permease protein [Pseudomonas putida KT2440] Length = 229 Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 70/206 (33%), Positives = 111/206 (53%), Gaps = 17/206 (8%) Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239 TLT++ A V +L I L + R SRH++ + A+P YI F G P LV + Sbjct: 18 TLTLELVAIAVVAGLILAIPLGI--ARSSRHWYVR---AVPFSYI--FFFRGTPLLVQLF 70 Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295 L Y L QF+ + S++ P F + ++ +TAA+IAEI+R L A+P+G Sbjct: 71 LVYY------GLAQFDAVRSSSLWPYLRDPFWCTVLTMTLHTAAYIAEILRGALQAIPKG 124 Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355 ++EAA ALG++ K ++LP+A R +P +++ + +LK S+LA V +L + T Sbjct: 125 EIEAARALGMSRGKTLFYIMLPRAARIGLPAYSNEVILMLKASALASTVTLLELTGMART 184 Query: 356 IINQTGQAIEIILIWMFIYLSLSIMI 381 II +T +EI YL +S M+ Sbjct: 185 IIARTYLPVEIFFAAGVFYLVISFML 210 >gi|307330911|ref|ZP_07610044.1| polar amino acid ABC transporter, inner membrane subunit [Streptomyces violaceusniger Tu 4113] gi|306883452|gb|EFN14505.1| polar amino acid ABC transporter, inner membrane subunit [Streptomyces violaceusniger Tu 4113] Length = 312 Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 46/117 (39%), Positives = 73/117 (62%), Gaps = 3/117 (2%) Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 AA++AEI R+GL +V GQ EAA ALG++H K R V+LPQAMR I+PP ++++N+LK Sbjct: 166 AAYMAEICRAGLQSVDEGQSEAAQALGMSHAKTLRRVVLPQAMRVIVPPTGNEFINMLKT 225 Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILI---WMFIYLSLSIMIALFMNRLNAK 391 +SL +AV + DL+ + +G E++ + W I S+ + ++ R A+ Sbjct: 226 TSLVIAVQYWDLLQATSEVGQNSGATAEMLFLAAAWYLILTSVLSVGQYYLERYYAR 282 >gi|16802888|ref|NP_464373.1| hypothetical protein lmo0847 [Listeria monocytogenes EGD-e] gi|16410235|emb|CAC98925.1| lmo0847 [Listeria monocytogenes EGD-e] Length = 480 Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 57/176 (32%), Positives = 95/176 (53%), Gaps = 23/176 (13%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 + PL+ + F FG+P AL +++ P F++ IALS Sbjct: 325 RGTPLIVQAFFFYFGIPA----ALDFRM-------------------PVFLAGVIALSLN 361 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 A++ EIVR G+ +V +GQMEAA +LGL H+KA V+LPQA+R +IP +Q++ LK Sbjct: 362 AGAYMVEIVRGGIQSVDKGQMEAARSLGLPHKKAMMKVVLPQAIRMMIPSFINQFVITLK 421 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 ++S+ A+G +L G I+ +T ++ LI +YL + ++ +RL ++ Sbjct: 422 DTSIMSAIGLVELTQSGKIIMARTFESTWTWLIIGIMYLIVITILTKISDRLERRL 477 Score = 40.0 bits (92), Expect = 0.65, Method: Compositional matrix adjust. Identities = 25/62 (40%), Positives = 35/62 (56%) Query: 88 AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147 A+L G T LA +I A IIG G ++S +K++ I VYV++FR P +V FF Sbjct: 276 ALLSGLWLTIRLAVVSLIIAFIIGITFGFMKVSNSKILRGIATVYVDIFRGTPLIVQAFF 335 Query: 148 LY 149 Y Sbjct: 336 FY 337 >gi|115350619|ref|YP_772458.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia ambifaria AMMD] gi|115280607|gb|ABI86124.1| L-glutamate ABC transporter membrane protein / L-aspartate ABC transporter membrane protein [Burkholderia ambifaria AMMD] Length = 246 Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 46/129 (35%), Positives = 75/129 (58%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + + L +T A + E VRSG+ A+P GQ A +A+G T + R VLLP A R I+P Sbjct: 111 FTASIVCLGLFTGARVCEQVRSGINALPTGQRAAGLAMGFTQWQTYRYVLLPVAYRIIVP 170 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PLTS++LN+ KNS++A +G DL + +++ T Q E + Y+ +++++ FM Sbjct: 171 PLTSEFLNIFKNSAVASTIGLLDLSAQARQLVDYTAQTYESFIAVTLAYVVINLVVMSFM 230 Query: 386 NRLNAKIAL 394 + + L Sbjct: 231 RWIEGRTRL 239 Score = 41.2 bits (95), Expect = 0.31, Method: Compositional matrix adjust. Identities = 25/77 (32%), Positives = 41/77 (53%) Query: 81 SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140 ++Y ++ GF T ++ + A I+G+L G R NK ++ I +YV +FRN+P Sbjct: 18 EPTTYFGWLMSGFWVTIEVSLVAWVIALIVGSLFGVLRTVPNKWLSAIGTIYVSIFRNVP 77 Query: 141 PLVVIFFLYKSVLSVLP 157 +V F Y V +LP Sbjct: 78 LIVQFFIWYLVVPELLP 94 >gi|157155672|ref|YP_001461823.1| glutamate/aspartate ABC transporter, permease protein GltK [Escherichia coli E24377A] gi|157077702|gb|ABV17410.1| glutamate/aspartate ABC transporter, permease protein GltK [Escherichia coli E24377A] Length = 224 Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 44/129 (34%), Positives = 80/129 (62%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 +S +A S + AA+ +EI+R+G+ ++ RGQ A+ALG+TH ++ +L++LPQA R+++ Sbjct: 96 RLISAMVAFSMFEAAYYSEIIRAGIQSISRGQSSVALALGMTHWQSMKLIILPQAFRAMV 155 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 P L +Q + L +++SL + AD TI + G +E+IL F+Y +S+ +L Sbjct: 156 PLLLTQGIVLFQDTSLVYVLSLADFFRTASTIGERDGTQVEMILFAGFVYFVISLSASLL 215 Query: 385 MNRLNAKIA 393 ++ L + A Sbjct: 216 VSYLKRRTA 224 Score = 41.2 bits (95), Expect = 0.29, Method: Compositional matrix adjust. Identities = 29/92 (31%), Positives = 49/92 (53%), Gaps = 10/92 (10%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G V T + + ++ + GT++ RLS+ VAW + YV VFR+IP ++V+ + Sbjct: 16 LLDGLVITLKITVTAVVIGILWGTMLAVMRLSSFAPVAWFAKAYVNVFRSIPLVMVLLWF 75 Query: 149 Y-------KSVLSVLPIPD---HSIVLPFGMF 170 Y ++VL + P D S ++ F MF Sbjct: 76 YLIVPGFLQNVLGLSPKNDIRLISAMVAFSMF 107 >gi|194397213|ref|YP_002037267.1| ABC transporter permease [Streptococcus pneumoniae G54] gi|194356880|gb|ACF55328.1| ABC transporter, permease protein [Streptococcus pneumoniae G54] Length = 225 Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 72/234 (30%), Positives = 112/234 (47%), Gaps = 35/234 (14%) Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFAT------RLSRHFHEKTGKALP 220 FG F N G F TL + + F+ + VLGI +T R+ H + + P Sbjct: 14 FGQFFN--GFLF-TLALAIGS--FILAMVLGIFFGAMSTSKRPILRILAHIFVEFYQNTP 68 Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280 LL + +GLP + D ++ P + + + + Y A+ Sbjct: 69 LLVQFVIVFYGLPLIS----------DHTIM-----------IPIYWTAVLCVGLYHGAY 107 Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340 IAE++RSG+ ++P GQMEAA++ G T+ A RL++LPQ R I+PPLT+Q +NL+KN+S Sbjct: 108 IAEVIRSGIQSIPSGQMEAALSQGFTYISAMRLIILPQTFRIILPPLTNQIVNLIKNTST 167 Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF---MNRLNAK 391 + DL+ V + G I L +Y +L +A F M + N K Sbjct: 168 VAIISGVDLMFVTKSWSALNGNYIPAFLGAALLYFALCFPVAQFGRKMEQANKK 221 >gi|23308880|ref|NP_601160.2| glutamate ABC-type transporter, permease component [Corynebacterium glutamicum ATCC 13032] gi|21903423|sp|P48245|GLUD_CORGL RecName: Full=Glutamate transport system permease protein gluD gi|21324723|dbj|BAB99346.1| ABC-type transporter, permease components (glutamate) [Corynebacterium glutamicum ATCC 13032] Length = 273 Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 58/166 (34%), Positives = 96/166 (57%), Gaps = 11/166 (6%) Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247 K VFS +L +V+ A L R + + + I TF +P L+L+ YQ+ Sbjct: 35 KSAVFSVILALVMGT-ALGLGRISEIRILRWFCAVIIETFR--AIPVLILMIFAYQM--- 88 Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307 Q+N + S ++ F ++ L+ Y + IAEI+RSG+ ++P+GQ EAAIALG++ Sbjct: 89 ---FAQYNIVPSSQLA--FAAVVFGLTMYNGSVIAEILRSGIASLPKGQKEAAIALGMSS 143 Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353 R+ T +LLPQA+ +++P L SQ + LK+S+L +G+ ++V G Sbjct: 144 RQTTWSILLPQAVAAMLPALISQMVIALKDSALGYQIGYIEVVRSG 189 Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 26/73 (35%), Positives = 43/73 (58%) Query: 78 PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137 P+ + ++ T IL G T A +I A ++GT +G GR+S +++ W C V +E FR Sbjct: 15 PFINSQTWTTYILPGLWGTLKSAVFSVILALVMGTALGLGRISEIRILRWFCAVIIETFR 74 Query: 138 NIPPLVVIFFLYK 150 IP L+++ F Y+ Sbjct: 75 AIPVLILMIFAYQ 87 >gi|116627889|ref|YP_820508.1| ABC-type amino acid transport system, permease component [Streptococcus thermophilus LMD-9] gi|116101166|gb|ABJ66312.1| ABC-type amino acid transport system, permease component [Streptococcus thermophilus LMD-9] Length = 232 Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 38/92 (41%), Positives = 67/92 (72%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G+ + P ++ + + YT A+I+EI+R+G+ A+P+GQ EAA++ G T+ R+++LPQ Sbjct: 95 GNVMIPTSLTAILCVGVYTGAYISEIIRTGIEAIPKGQTEAALSQGFTYADTMRIIILPQ 154 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 A+R+I+PPLT+Q +NL+KN+S + AD++ Sbjct: 155 AVRTILPPLTNQVVNLIKNTSTVAIISGADIM 186 Score = 42.0 bits (97), Expect = 0.19, Method: Compositional matrix adjust. Identities = 27/77 (35%), Positives = 46/77 (59%), Gaps = 7/77 (9%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV--VIFFLY 149 GF+ T ++ +I A ++G + GA + NK++ I RVYVE+F+N P LV V+ F Sbjct: 29 GFLYTLGISIGALIVALLLGLIFGAMSSTHNKVLRGISRVYVEIFQNTPLLVQFVVVFYG 88 Query: 150 KSVLSVLPIPDHSIVLP 166 S+L+ D ++++P Sbjct: 89 ISILT-----DGNVMIP 100 >gi|313609881|gb|EFR85296.1| glutamine ABC transporter, permease/substrate-binding protein [Listeria monocytogenes FSL F2-208] Length = 471 Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 57/176 (32%), Positives = 95/176 (53%), Gaps = 23/176 (13%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 + PL+ + F FG+P AL +++ P F++ IALS Sbjct: 316 RGTPLIVQAFFFYFGIPA----ALDFRM-------------------PVFLAGVIALSLN 352 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 A++ EIVR G+ +V +GQMEAA +LGL H+KA V+LPQA+R +IP +Q++ LK Sbjct: 353 AGAYMVEIVRGGIQSVDKGQMEAARSLGLPHKKAMMKVVLPQAIRMMIPSFINQFVITLK 412 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 ++S+ A+G +L G I+ +T ++ LI +YL + ++ +RL ++ Sbjct: 413 DTSIMSAIGLVELTQSGKIIMARTFESTWTWLIIGIMYLIVITILTKISDRLERRL 468 Score = 40.0 bits (92), Expect = 0.72, Method: Compositional matrix adjust. Identities = 25/62 (40%), Positives = 35/62 (56%) Query: 88 AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147 A+L G T LA +I A IIG G ++S +K++ I VYV++FR P +V FF Sbjct: 267 ALLSGLWLTIRLAVVSLIIAFIIGITFGFMKVSNSKILRGIATVYVDIFRGTPLIVQAFF 326 Query: 148 LY 149 Y Sbjct: 327 FY 328 >gi|293397298|ref|ZP_06641570.1| glutamate/aspartate ABC superfamily ATP binding cassette transporter, permease protein [Serratia odorifera DSM 4582] gi|291420216|gb|EFE93473.1| glutamate/aspartate ABC superfamily ATP binding cassette transporter, permease protein [Serratia odorifera DSM 4582] Length = 224 Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 47/134 (35%), Positives = 83/134 (61%), Gaps = 4/134 (2%) Query: 262 VSPE----FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317 +SP+ +S +A S + AA+ +EI+R+G+ +V RGQ AA+ALG+TH ++ +LV+LP Sbjct: 89 ISPKTDIRLISAMVAFSLFEAAYYSEIIRAGIQSVSRGQSSAALALGMTHWQSMKLVILP 148 Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377 QA R+++P L +Q + L +++SL + AD +I + G +E+IL F+Y + Sbjct: 149 QAFRAMVPLLLTQGIVLFQDTSLVYVLSLADFFRTASSIGERDGTQVEMILFAGFVYFVI 208 Query: 378 SIMIALFMNRLNAK 391 SI + ++ L + Sbjct: 209 SIAASALVSYLKKR 222 Score = 37.7 bits (86), Expect = 3.5, Method: Compositional matrix adjust. Identities = 24/91 (26%), Positives = 47/91 (51%), Gaps = 13/91 (14%) Query: 70 FEIDQGIV----PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLV 125 +E D G + PY ++ G + T + + ++ + GT++ RLS K + Sbjct: 2 YEFDWGSIVPSLPY---------LMQGMIVTLKITVTAVVFGIVWGTILAVMRLSPLKPI 52 Query: 126 AWICRVYVEVFRNIPPLVVIFFLYKSVLSVL 156 +W +YV +FR++P ++V+ + Y V S+L Sbjct: 53 SWFATLYVNLFRSVPLVMVLLWFYLVVPSLL 83 >gi|260574100|ref|ZP_05842105.1| polar amino acid ABC transporter, inner membrane subunit [Rhodobacter sp. SW2] gi|259023566|gb|EEW26857.1| polar amino acid ABC transporter, inner membrane subunit [Rhodobacter sp. SW2] Length = 266 Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 59/218 (27%), Positives = 118/218 (54%), Gaps = 18/218 (8%) Query: 190 FVFSFVLGIVLSL------FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243 F + ++G+ L+L A R + F+ + + +P++ + ++ F +++A + Sbjct: 57 FALACLIGLGLALAAQSRFLALRQAARFYVEVVRGVPIIVLLLYVAFAATPALVLAWNWA 116 Query: 244 ---LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300 L FD F+ + + IAL+ AAF+AE+ R+GL++V +GQ+EAA Sbjct: 117 TGPLGFDPLKSRDFSLLWRAV---------IALTLAYAAFLAEVFRAGLLSVDKGQIEAA 167 Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 ALGL + R ++ PQA R+I+PPL + ++ ++K+SSL +G AD+ +G Sbjct: 168 QALGLNGWQRFRHIVFPQAFRTILPPLGNDFVAMVKDSSLVSVLGVADVTQLGKVTSAGN 227 Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 + E + IYL++++ ++L + +L A++ + ++ Sbjct: 228 FRYFETYNVVALIYLTMTVTLSLGLRKLEARLRQRSEQ 265 >gi|313624521|gb|EFR94518.1| glutamine ABC transporter, permease/substrate-binding protein [Listeria innocua FSL J1-023] Length = 480 Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 57/176 (32%), Positives = 95/176 (53%), Gaps = 23/176 (13%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 + PL+ + F FG+P AL +++ P F++ IALS Sbjct: 325 RGTPLIVQAFFFYFGIPA----ALDFRM-------------------PVFLAGVIALSLN 361 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 A++ EIVR G+ +V +GQMEAA +LGL H+KA V+LPQA+R +IP +Q++ LK Sbjct: 362 AGAYMVEIVRGGIQSVDKGQMEAARSLGLPHKKAMMKVVLPQAIRMMIPSFINQFVITLK 421 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 ++S+ A+G +L G I+ +T ++ LI +YL + ++ +RL ++ Sbjct: 422 DTSIMSAIGLVELTQSGKIIMARTFESTWTWLIIGIMYLIVITILTKVSDRLERRL 477 Score = 40.4 bits (93), Expect = 0.47, Method: Compositional matrix adjust. Identities = 25/62 (40%), Positives = 35/62 (56%) Query: 88 AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147 A+L G T LA +I A IIG G ++S +K++ I VYV++FR P +V FF Sbjct: 276 ALLAGMWLTIRLAVVSLIIAFIIGITFGFMKVSNSKILRGIATVYVDIFRGTPLIVQAFF 335 Query: 148 LY 149 Y Sbjct: 336 FY 337 >gi|145295858|ref|YP_001138679.1| hypothetical protein cgR_1783 [Corynebacterium glutamicum R] gi|140845778|dbj|BAF54777.1| hypothetical protein [Corynebacterium glutamicum R] Length = 315 Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 58/166 (34%), Positives = 96/166 (57%), Gaps = 11/166 (6%) Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247 K VFS +L +V+ A L R + + + I TF +P L+L+ YQ+ Sbjct: 77 KSAVFSVILALVMGT-ALGLGRISEIRILRWFCAVIIETFR--AIPVLILMIFAYQM--- 130 Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307 Q+N + S ++ F ++ L+ Y + IAEI+RSG+ ++P+GQ EAAIALG++ Sbjct: 131 ---FAQYNIVPSSQLA--FAAVVFGLTMYNGSVIAEILRSGIASLPKGQKEAAIALGMSS 185 Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353 R+ T +LLPQA+ +++P L SQ + LK+S+L +G+ ++V G Sbjct: 186 RQTTWSILLPQAVAAMLPALISQMVIALKDSALGYQIGYIEVVRSG 231 Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 26/73 (35%), Positives = 43/73 (58%) Query: 78 PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137 P+ + ++ T IL G T A +I A ++GT +G GR+S +++ W C V +E FR Sbjct: 57 PFINSQTWTTYILPGLWGTLKSAVFSVILALVMGTALGLGRISEIRILRWFCAVIIETFR 116 Query: 138 NIPPLVVIFFLYK 150 IP L+++ F Y+ Sbjct: 117 AIPVLILMIFAYQ 129 >gi|16799914|ref|NP_470182.1| hypothetical protein lin0840 [Listeria innocua Clip11262] gi|16413291|emb|CAC96072.1| lin0840 [Listeria innocua Clip11262] gi|313619849|gb|EFR91431.1| glutamine ABC transporter, permease/substrate-binding protein [Listeria innocua FSL S4-378] Length = 480 Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 57/176 (32%), Positives = 95/176 (53%), Gaps = 23/176 (13%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 + PL+ + F FG+P AL +++ P F++ IALS Sbjct: 325 RGTPLIVQAFFFYFGIPA----ALDFRM-------------------PVFLAGVIALSLN 361 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 A++ EIVR G+ +V +GQMEAA +LGL H+KA V+LPQA+R +IP +Q++ LK Sbjct: 362 AGAYMVEIVRGGIQSVDKGQMEAARSLGLPHKKAMMKVVLPQAIRMMIPSFINQFVITLK 421 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 ++S+ A+G +L G I+ +T ++ LI +YL + ++ +RL ++ Sbjct: 422 DTSIMSAIGLVELTQSGKIIMARTFESTWTWLIIGIMYLIVITILTKVSDRLERRL 477 Score = 40.4 bits (93), Expect = 0.47, Method: Compositional matrix adjust. Identities = 25/62 (40%), Positives = 35/62 (56%) Query: 88 AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147 A+L G T LA +I A IIG G ++S +K++ I VYV++FR P +V FF Sbjct: 276 ALLAGMWLTIRLAVVSLIIAFIIGITFGFMKVSNSKILRGIATVYVDIFRGTPLIVQAFF 335 Query: 148 LY 149 Y Sbjct: 336 FY 337 >gi|296533469|ref|ZP_06896049.1| amino acid ABC superfamily ATP binding cassette transporter, permease protein [Roseomonas cervicalis ATCC 49957] gi|296266204|gb|EFH12249.1| amino acid ABC superfamily ATP binding cassette transporter, permease protein [Roseomonas cervicalis ATCC 49957] Length = 384 Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 66/204 (32%), Positives = 111/204 (54%), Gaps = 18/204 (8%) Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251 F+F L I+++L R K L +LY+ LI G+P LI+L + P+ Sbjct: 190 FAFPLSILVAL-----GRRSRMPAIKLLCILYVE--LIRGVP---LISLLFMASVMFPL- 238 Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311 F+ + + IA+ + AA++AE+VR GL A+P+GQ EAA ALGL++ + T Sbjct: 239 ----FLPEGINIDKLLRAQIAIILFAAAYLAEVVRGGLQALPKGQYEAAEALGLSYWQKT 294 Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ---TGQAIEIIL 368 ++LPQA+R +IPPL + ++ K++SL + +G DL++ G T I + G IE+ + Sbjct: 295 GFIILPQALRLVIPPLVNTFIGFFKDTSLVLIIGIFDLLTAGKTAIVEPAWQGFGIEVYV 354 Query: 369 IWMFIYLSLSIMIALFMNRLNAKI 392 + IY ++ + L A++ Sbjct: 355 VVGLIYFVFCFAMSRYSQNLEAEL 378 >gi|217958228|ref|YP_002336774.1| amino acid ABC transporter, permease protein [Bacillus cereus AH187] gi|229137442|ref|ZP_04266053.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus BDRD-ST26] gi|217066252|gb|ACJ80502.1| amino acid ABC transporter, permease protein [Bacillus cereus AH187] gi|228646000|gb|EEL02223.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus BDRD-ST26] Length = 214 Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 61/185 (32%), Positives = 100/185 (54%), Gaps = 30/185 (16%) Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPT 234 +T++ V SF++G V+ + F + G + LPLL I F F LP Sbjct: 21 ITLEVALVAIVLSFIIGSVIGIVRYTKIPVFSQILGFIVEVIRNLPLLLIIFFTYFALPE 80 Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294 + LK ++ ++ +AL+ + AA I+EIVRSGL+++ + Sbjct: 81 ---VGLKLEI---------------------ITAVIVALTIFEAAMISEIVRSGLLSIEK 116 Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354 GQ+EAA + GLT+ +A ++LPQA+R ++PPL SQ+++LLK++SLAVA+ +L+ Sbjct: 117 GQIEAARSSGLTYVQALWSIILPQALRRMVPPLVSQFISLLKDTSLAVAISLPELMHNAQ 176 Query: 355 TIINQ 359 I Q Sbjct: 177 IISGQ 181 Score = 36.6 bits (83), Expect = 6.9, Method: Compositional matrix adjust. Identities = 21/61 (34%), Positives = 36/61 (59%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G + T +A ++ + IIG+++G R + + + I VEV RN+P L++IFF Sbjct: 15 LLKGLLITLEVALVAIVLSFIIGSVIGIVRYTKIPVFSQILGFIVEVIRNLPLLLIIFFT 74 Query: 149 Y 149 Y Sbjct: 75 Y 75 >gi|116872260|ref|YP_849041.1| glutamine ABC transporter binding and transport protein, putative [Listeria welshimeri serovar 6b str. SLCC5334] gi|116741138|emb|CAK20258.1| glutamine ABC transporter binding and transport protein, putative [Listeria welshimeri serovar 6b str. SLCC5334] Length = 480 Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 57/176 (32%), Positives = 95/176 (53%), Gaps = 23/176 (13%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 + PL+ + F FG+P AL +++ P F++ IALS Sbjct: 325 RGTPLIVQAFFFYFGIPA----ALDFRM-------------------PVFLAGVIALSLN 361 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 A++ EIVR G+ +V +GQMEAA +LGL H+KA V+LPQA+R +IP +Q++ LK Sbjct: 362 AGAYMVEIVRGGIQSVDKGQMEAARSLGLPHKKAMMKVVLPQAIRMMIPSFINQFVITLK 421 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 ++S+ A+G +L G I+ +T ++ LI +YL + ++ +RL ++ Sbjct: 422 DTSIMSAIGLVELTQSGKIIMARTFESTWTWLIIGIMYLIVITILTKVSDRLERRL 477 Score = 40.4 bits (93), Expect = 0.47, Method: Compositional matrix adjust. Identities = 25/62 (40%), Positives = 35/62 (56%) Query: 88 AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147 A+L G T LA +I A IIG G ++S +K++ I VYV++FR P +V FF Sbjct: 276 ALLAGMWLTIRLAVVSLIIAFIIGITFGFMKVSNSKILRGIATVYVDIFRGTPLIVQAFF 335 Query: 148 LY 149 Y Sbjct: 336 FY 337 >gi|328479075|gb|EGF48533.1| amino acid ABC transporter permease [Lactobacillus rhamnosus MTCC 5462] Length = 224 Score = 90.5 bits (223), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 53/120 (44%), Positives = 75/120 (62%), Gaps = 2/120 (1%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I L YT+AFIAE VR+G+ AVP GQME A ++G+T+ +A ++ PQA + +IPPL +Q Sbjct: 90 IGLLIYTSAFIAETVRAGIEAVPSGQMEGARSIGMTYTQAMTQIIFPQAFKIVIPPLGNQ 149 Query: 331 YLNLLKNSS-LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 ++NL+KNSS LA GF DL+ G I T + LI YL L++ ++ M L Sbjct: 150 FINLVKNSSVLAFVAGF-DLMYQGKLIAATTFSTFDTYLIVGIFYLILTMPLSYLMRYLE 208 >gi|113866502|ref|YP_724991.1| ABC transporter permease [Ralstonia eutropha H16] gi|113525278|emb|CAJ91623.1| ABC-type transporter, permease component: PAAT family [Ralstonia eutropha H16] Length = 242 Score = 90.5 bits (223), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 45/129 (34%), Positives = 79/129 (61%) Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322 + +F++ + L +TAA + E VRSG+ ++ RGQ A +A+G T + R VLLP A R Sbjct: 104 AQQFLAAMLCLGTFTAARVCEQVRSGINSLARGQKNAGLAMGFTLPQTYRHVLLPMAFRV 163 Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382 I+PPLTS++LN+ KNS++A +G +L + G +++ T + E + +Y +++ + Sbjct: 164 IVPPLTSEFLNIFKNSAVASTIGLLELAAQGRQLVDYTARPYESFIAVTLMYALINVTVM 223 Query: 383 LFMNRLNAK 391 L M + A+ Sbjct: 224 LIMRWVEAR 232 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 28/77 (36%), Positives = 41/77 (53%) Query: 81 SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140 + +Y ++ G T L S + A +IG+++G R NK +A I YVE+FRNIP Sbjct: 16 QNETYLDWMISGLKVTLALGLSSWVIALVIGSVLGVLRTVPNKWLAGIAATYVEIFRNIP 75 Query: 141 PLVVIFFLYKSVLSVLP 157 LV +F Y +LP Sbjct: 76 LLVQLFIWYFVAPELLP 92 >gi|239813838|ref|YP_002942748.1| polar amino acid ABC transporter inner membrane subunit [Variovorax paradoxus S110] gi|239800415|gb|ACS17482.1| polar amino acid ABC transporter, inner membrane subunit [Variovorax paradoxus S110] Length = 244 Score = 90.5 bits (223), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 54/134 (40%), Positives = 79/134 (58%), Gaps = 4/134 (2%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P F+ + +AL +T+A IAE VRSG+ A+P+GQ A +A+G T + R V+LP A R I Sbjct: 100 PSFVLVVLALGFFTSARIAEQVRSGIQALPKGQRYAGMAVGFTTPQYYRYVILPMAYRII 159 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 IPPLTS+ +N+ KNSS+A AV +L +T + IE+ L L ++ A Sbjct: 160 IPPLTSETMNIFKNSSVAFAVSVTELTMFAMQAQEETSRGIEVYL----AVTGLYVISAF 215 Query: 384 FMNRLNAKIALKEK 397 +NR+ A I K + Sbjct: 216 AINRIMAYIEKKTR 229 >gi|150020367|ref|YP_001305721.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC [Thermosipho melanesiensis BI429] gi|149792888|gb|ABR30336.1| Ectoine/hydroxyectoine ABC transporter, permease protein EhuC [Thermosipho melanesiensis BI429] Length = 216 Score = 90.5 bits (223), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 68/201 (33%), Positives = 111/201 (55%), Gaps = 26/201 (12%) Query: 188 KIFVFSFVLGIVLSLF--ATRLSRHFHEKTGKALPL---LYISTFLIFGLPTLVLIALKY 242 K+ FS ++G+VL F RLS+ KA+ + +Y+ + G P LV I++ Y Sbjct: 23 KLTFFSVLIGLVLGTFIGMGRLSKI------KAINIPSTVYVE--FLRGTPLLVQISIVY 74 Query: 243 QLHFDKPVLG-QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301 F P LG Q + + +AL + A+IAEIVR+G+ ++P+GQ EAA Sbjct: 75 ---FGLPQLGIQLE---------AYPAAIVALGLNSGAYIAEIVRAGIQSIPKGQYEAAR 122 Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361 +LG+TH + R ++LPQA ++I+P L ++++ L K+SSLA +G +L+ G +I +T Sbjct: 123 SLGMTHFQTMRYIILPQAFKNILPALGNEFITLTKDSSLASIIGVTELMRRGQFVITRTF 182 Query: 362 QAIEIILIWMFIYLSLSIMIA 382 Q I IY ++ I+ Sbjct: 183 QTFSIYFGIALIYFVMTFTIS 203 Score = 38.5 bits (88), Expect = 2.0, Method: Compositional matrix adjust. Identities = 23/61 (37%), Positives = 33/61 (54%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L+G +T L F ++ ++GT +G GRLS K + VYVE R P LV I + Sbjct: 14 LLLGAWDTLKLTFFSVLIGLVLGTFIGMGRLSKIKAINIPSTVYVEFLRGTPLLVQISIV 73 Query: 149 Y 149 Y Sbjct: 74 Y 74 >gi|62390793|ref|YP_226195.1| glutamate permease [Corynebacterium glutamicum ATCC 13032] gi|41326131|emb|CAF20294.1| GLUTAMATE PERMEASE [Corynebacterium glutamicum ATCC 13032] Length = 315 Score = 90.5 bits (223), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 58/166 (34%), Positives = 96/166 (57%), Gaps = 11/166 (6%) Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247 K VFS +L +V+ A L R + + + I TF +P L+L+ YQ+ Sbjct: 77 KSAVFSVILALVMGT-ALGLGRISEIRILRWFCAVIIETFR--AIPVLILMIFAYQM--- 130 Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307 Q+N + S ++ F ++ L+ Y + IAEI+RSG+ ++P+GQ EAAIALG++ Sbjct: 131 ---FAQYNIVPSSQLA--FAAVVFGLTMYNGSVIAEILRSGIASLPKGQKEAAIALGMSS 185 Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353 R+ T +LLPQA+ +++P L SQ + LK+S+L +G+ ++V G Sbjct: 186 RQTTWSILLPQAVAAMLPALISQMVIALKDSALGYQIGYIEVVRSG 231 Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 26/73 (35%), Positives = 43/73 (58%) Query: 78 PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137 P+ + ++ T IL G T A +I A ++GT +G GR+S +++ W C V +E FR Sbjct: 57 PFINSQTWTTYILPGLWGTLKSAVFSVILALVMGTALGLGRISEIRILRWFCAVIIETFR 116 Query: 138 NIPPLVVIFFLYK 150 IP L+++ F Y+ Sbjct: 117 AIPVLILMIFAYQ 129 >gi|259909118|ref|YP_002649474.1| Glutamate/aspartate transport system permease [Erwinia pyrifoliae Ep1/96] gi|224964740|emb|CAX56257.1| Glutamate/aspartate transport system permease [Erwinia pyrifoliae Ep1/96] gi|283479146|emb|CAY75062.1| putative glutamate/aspartate ABC transport system, inner membrane component [Erwinia pyrifoliae DSM 12163] Length = 245 Score = 90.5 bits (223), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 48/138 (34%), Positives = 79/138 (57%), Gaps = 3/138 (2%) Query: 260 STVSPE---FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316 S + P F + L +TAA + E VR+ + ++P GQ A +A+GLT + R VLL Sbjct: 102 SEIDPNIQFFTCSVLCLGLFTAARVCEQVRAAIQSLPSGQKNAGLAMGLTLPQTYRYVLL 161 Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376 P A R I+PP+TS+ LNL+KNS++A +G D+ + G +++ + A E Y++ Sbjct: 162 PNAYRVIVPPMTSEMLNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAYESFTAITLAYIA 221 Query: 377 LSIMIALFMNRLNAKIAL 394 ++ +I L M + K+ L Sbjct: 222 INTVIMLLMGLVERKVRL 239 Score = 37.0 bits (84), Expect = 5.2, Method: Compositional matrix adjust. Identities = 23/77 (29%), Positives = 39/77 (50%) Query: 81 SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140 +++Y + GF T ++ I A +G+ G R +L++ + YVE+FRN+P Sbjct: 17 GNTTYLGWLWSGFQVTIAVSVCAWIIALFVGSFFGILRTVPGRLLSSLGTCYVELFRNVP 76 Query: 141 PLVVIFFLYKSVLSVLP 157 +V F Y V +LP Sbjct: 77 LIVQFFIWYLVVPELLP 93 >gi|330466434|ref|YP_004404177.1| binding-protein-dependent transporter inner membrane component [Verrucosispora maris AB-18-032] gi|328809405|gb|AEB43577.1| binding-protein-dependent transporter inner membrane component [Verrucosispora maris AB-18-032] Length = 224 Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 59/150 (39%), Positives = 85/150 (56%), Gaps = 5/150 (3%) Query: 252 GQFNFIGGSTVSPEFMSLY----IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307 G F +G S F+++Y I LS YTAAF+ E VRSG+ VP GQ EAA A+GLT Sbjct: 75 GLFVTLGLSLSQDLFLNIYWLGVIGLSTYTAAFVCEAVRSGINTVPTGQAEAARAIGLTF 134 Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA-IEI 366 + R+V+LPQA RS+I P S + L KN+++ +G + SV +IN G A I I Sbjct: 135 AQTLRIVVLPQAARSVIAPFGSILIALCKNATIVGTIGLMESSSVMKDLINFNGDAVIPI 194 Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 L++ + ++ I F L ++A+K Sbjct: 195 FLVFAGTFAAILIPTGYFFGWLANRLAVKR 224 >gi|297192145|ref|ZP_06909543.1| polar amino acid ABC transporter [Streptomyces pristinaespiralis ATCC 25486] gi|197720209|gb|EDY64117.1| polar amino acid ABC transporter [Streptomyces pristinaespiralis ATCC 25486] Length = 326 Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 73/211 (34%), Positives = 115/211 (54%), Gaps = 12/211 (5%) Query: 188 KIFVFSFVLGIVLS--LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH 245 KI V+S V+G+VL L RLS + ++ YI + G P LV I L + L Sbjct: 89 KITVYSMVIGVVLGAILAVMRLSPN---PVLSSVAWGYI--WFFRGTPVLVQILLWFNLS 143 Query: 246 --FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 F LG + V F++ +AL AA++AEI R+G+ +V GQ EAA AL Sbjct: 144 LVFQYLDLGFIYRDEMNQVMTPFVAALLALGLNEAAYMAEICRAGIQSVDSGQTEAAHAL 203 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363 G+ + R ++LPQAMR IIPP ++++N+LK SSLA A+G+ +L G ++T Sbjct: 204 GMKGGRTMRRIVLPQAMRVIIPPTGNEFINMLKTSSLAFAIGYGELFLRGREFGSRTLAI 263 Query: 364 IEIILIWMFIYLSLSIMIAL---FMNRLNAK 391 +E ++ YL+L+ + ++ ++ R A+ Sbjct: 264 MEGYIVISLWYLALTTVFSIGQYYLERYYAR 294 >gi|313902717|ref|ZP_07836115.1| amino acid ABC transporter membrane protein, PAAT family [Thermaerobacter subterraneus DSM 13965] gi|313467014|gb|EFR62530.1| amino acid ABC transporter membrane protein, PAAT family [Thermaerobacter subterraneus DSM 13965] Length = 225 Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 62/166 (37%), Positives = 95/166 (57%), Gaps = 20/166 (12%) Query: 188 KIFVFSFVLGIVLSLFAT--RLSRHFHEKT-GKALPLLYISTFLIFGLPTLVLIALKYQL 244 K+ V S VLG+ + L +LSR +T G A T++I G P LV I L Y Sbjct: 31 KLTVVSIVLGLAIGLLVALMKLSRFGVLRTIGSAY------TWIIRGTPLLVQIYLIY-- 82 Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304 F V F + ALS + A++AEI+R+G+ ++PRGQMEAA +LG Sbjct: 83 ---------FGLSDYGIVLEAFPAGVAALSINSGAYLAEIIRAGIESIPRGQMEAARSLG 133 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 +++ +A R V+LPQA R +IPP+ ++++ LLK+SSL +G +++ Sbjct: 134 MSYGQAMRRVILPQAYRRMIPPMVNEFVILLKDSSLVSVIGLQEIM 179 >gi|171321020|ref|ZP_02910007.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria MEX-5] gi|171093717|gb|EDT38861.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria MEX-5] Length = 246 Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 46/129 (35%), Positives = 75/129 (58%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + + L +T A + E VRSG+ A+P GQ A +A+G T + R VLLP A R I+P Sbjct: 111 FTASIVCLGLFTGARVCEQVRSGINALPTGQRAAGLAMGFTQWQTYRYVLLPVAYRIIVP 170 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PLTS++LN+ KNS++A +G DL + +++ T Q E + Y+ +++++ FM Sbjct: 171 PLTSEFLNIFKNSAVASTIGLLDLSAQARQLVDYTAQTYESFIAVTLAYVVINLVVMSFM 230 Query: 386 NRLNAKIAL 394 + + L Sbjct: 231 RWIEGRTRL 239 Score = 42.0 bits (97), Expect = 0.18, Method: Compositional matrix adjust. Identities = 27/77 (35%), Positives = 41/77 (53%) Query: 81 SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140 ++Y ++ GF T ++ + A I+G+L G R NK ++ I VYV +FRNIP Sbjct: 18 EPTTYFGWLMSGFWVTIEVSLVAWVIALIVGSLFGVLRTVPNKWLSAIGTVYVSIFRNIP 77 Query: 141 PLVVIFFLYKSVLSVLP 157 +V F Y V +LP Sbjct: 78 LIVQFFVWYLVVPELLP 94 >gi|229154344|ref|ZP_04282464.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus ATCC 4342] gi|228629168|gb|EEK85875.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus ATCC 4342] Length = 214 Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 61/185 (32%), Positives = 100/185 (54%), Gaps = 30/185 (16%) Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPT 234 +T++ V SF++G V+ + F + G + LPLL I F F LP Sbjct: 21 ITLEVALVAIVLSFIIGSVIGIVRYTKIPVFSQILGFIVEVIRNLPLLLIIFFTYFALPE 80 Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294 + LK ++ ++ +AL+ + AA I+EIVRSGL+++ + Sbjct: 81 ---VGLKLEI---------------------ITAVIVALTIFEAAMISEIVRSGLLSIEK 116 Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354 GQ+EAA + GLT+ +A ++LPQA+R ++PPL SQ+++LLK++SLAVA+ +L+ Sbjct: 117 GQIEAARSSGLTYVQALWHIILPQALRRMVPPLVSQFISLLKDTSLAVAISLPELMHNAQ 176 Query: 355 TIINQ 359 I Q Sbjct: 177 IISGQ 181 Score = 36.6 bits (83), Expect = 6.8, Method: Compositional matrix adjust. Identities = 21/61 (34%), Positives = 36/61 (59%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G + T +A ++ + IIG+++G R + + + I VEV RN+P L++IFF Sbjct: 15 LLKGLLITLEVALVAIVLSFIIGSVIGIVRYTKIPVFSQILGFIVEVIRNLPLLLIIFFT 74 Query: 149 Y 149 Y Sbjct: 75 Y 75 >gi|150398297|ref|YP_001328764.1| polar amino acid ABC transporter inner membrane subunit [Sinorhizobium medicae WSM419] gi|150029812|gb|ABR61929.1| polar amino acid ABC transporter, inner membrane subunit [Sinorhizobium medicae WSM419] Length = 274 Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 68/224 (30%), Positives = 118/224 (52%), Gaps = 38/224 (16%) Query: 190 FVFSFVLGIVLSLFATRLSRH--------FHEKTGKALPLLYISTFLIF-GLPTLVLIAL 240 FV + +LG+ ++L A LS H F+ + + +P+L + ++ F G P LV A Sbjct: 62 FVLATLLGLGVALMA--LSGHVALRQIARFYTEVIRGVPILVLLFYIAFVGAPALVTAA- 118 Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLY------------IALSCYTAAFIAEIVRSG 288 NF+ +S +M + IAL +AFIAE+ R+G Sbjct: 119 --------------NFVAAPLISAGWMEAFVVRDVSLMWRAIIALMIGYSAFIAEVFRAG 164 Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348 + +V +GQ+EAA ALGL+ + RLV+ PQA+R I+PPL + ++ ++K+SSL +G AD Sbjct: 165 IQSVDKGQVEAAKALGLSRYQRFRLVVFPQAIRVILPPLGNDFVAMVKDSSLVSVLGVAD 224 Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 + +G + + + E I ++YL L+I ++L + + ++ Sbjct: 225 VTQMGKIYASGSFRFFETYSIVAYVYLVLTIGLSLALRAVEQRL 268 >gi|293393702|ref|ZP_06638011.1| glutamate/aspartate ABC superfamily ATP binding cassette transporter, membrane protein [Serratia odorifera DSM 4582] gi|291423824|gb|EFE97044.1| glutamate/aspartate ABC superfamily ATP binding cassette transporter, membrane protein [Serratia odorifera DSM 4582] Length = 252 Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 51/108 (47%), Positives = 71/108 (65%), Gaps = 2/108 (1%) Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312 QF ++ + S EF++ L+ Y+AAFIAE VRSG+ V GQ +AA ALGLT +A R Sbjct: 106 QFGWL--AWPSFEFLAGCCGLTLYSAAFIAEEVRSGIRGVAVGQKQAANALGLTGWQAMR 163 Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 V+LPQA+ +PPL QY+NL+KNSSL +A+G A+L + +T Sbjct: 164 HVVLPQALTIALPPLLGQYMNLIKNSSLTMAIGVAELSYASRQVETET 211 Score = 45.1 bits (105), Expect = 0.021, Method: Compositional matrix adjust. Identities = 30/106 (28%), Positives = 50/106 (47%), Gaps = 12/106 (11%) Query: 52 MEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIG 111 M+ ++G+ FL+E + + Y + GF+ T WL+ + AT++G Sbjct: 1 MDAERATMGMQFLAE------------WLLEPQYLGWLWHGFLLTLWLSACAGLAATLLG 48 Query: 112 TLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLP 157 + A R S L+ + Y +FRN P LV +FF Y + +LP Sbjct: 49 LAIAALRDSPLPLLRGLAVAYSALFRNTPLLVQLFFWYFAAGQILP 94 >gi|294676009|ref|YP_003576624.1| amino acid ABC transporter permease [Rhodobacter capsulatus SB 1003] gi|294474829|gb|ADE84217.1| amino acid ABC transporter, permease protein [Rhodobacter capsulatus SB 1003] Length = 262 Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 72/223 (32%), Positives = 115/223 (51%), Gaps = 14/223 (6%) Query: 178 FPTLTMDTNAKIFV----FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233 F TL+ IFV F L + L L LSRH + L T +I G+P Sbjct: 37 FATLSKGIGVTIFVTLVAFLGALVLGLLLAVASLSRHLIWRQ-----LARFYTEVIRGVP 91 Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVS----PEFMSLYIALSCYTAAFIAEIVRSGL 289 +VL+ L ++ +N +G +S P +AL AAF+AE+ R+GL Sbjct: 92 IIVLL-LYVAFALVPALVAGWNALGLPELSVRDFPLLARAVLALILAYAAFLAEVFRAGL 150 Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349 I+V RGQ+EAA ALGL RL++ PQA R+++PPL + ++ ++K+SSL +G AD+ Sbjct: 151 ISVERGQIEAAKALGLGGWLRFRLIVFPQAFRTVLPPLGNDFVAMVKDSSLVSVLGVADI 210 Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 +G + E + IYL++++ ++L + +L A + Sbjct: 211 TQLGKVTAAGNFRYFETYNVVALIYLAMTVTLSLLLRKLEAHL 253 >gi|326318772|ref|YP_004236444.1| polar amino acid ABC transporter inner membrane subunit [Acidovorax avenae subsp. avenae ATCC 19860] gi|323375608|gb|ADX47877.1| polar amino acid ABC transporter, inner membrane subunit [Acidovorax avenae subsp. avenae ATCC 19860] Length = 243 Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 56/132 (42%), Positives = 78/132 (59%), Gaps = 4/132 (3%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+ + +AL +T+A IAE VRSG+ A+PRGQ A +ALG T + R VLLP A R IIP Sbjct: 102 FILVVLALGFFTSARIAEQVRSGIQALPRGQRYAGMALGFTTAQYYRYVLLPMAFRIIIP 161 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PLTS+ +N+ KNSS+A AV +L +T + IEI L L ++ A + Sbjct: 162 PLTSETMNIFKNSSVAFAVSVTELTMFAMQAQEETSRGIEIYL----AVTGLYVISAFAI 217 Query: 386 NRLNAKIALKEK 397 NR+ A I + + Sbjct: 218 NRIMAFIEKRAR 229 Score = 39.7 bits (91), Expect = 0.85, Method: Compositional matrix adjust. Identities = 31/103 (30%), Positives = 49/103 (47%), Gaps = 6/103 (5%) Query: 78 PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGR-LSANKLVAWICRVYVEVF 136 P +Y +L + T +A ++ A + G+++G R L NK + +VE+F Sbjct: 14 PGGEYPTYLQWMLSAWGWTVSVALLALVIALVAGSVIGTIRTLPDNKFLVGFGNAWVELF 73 Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHS-----IVLPFGMFLNNR 174 RNIP LV IF Y V ++ P+ +VL G F + R Sbjct: 74 RNIPLLVQIFLWYHVVPAIFPVMKSVSGFILVVLALGFFTSAR 116 >gi|206580088|ref|YP_002238062.1| amino acid ABC transporter, permease protein [Klebsiella pneumoniae 342] gi|288935047|ref|YP_003439106.1| polar amino acid ABC transporter inner membrane subunit [Klebsiella variicola At-22] gi|290509109|ref|ZP_06548480.1| polar amino acid transport system permease [Klebsiella sp. 1_1_55] gi|206569146|gb|ACI10922.1| amino acid ABC transporter, permease protein [Klebsiella pneumoniae 342] gi|288889756|gb|ADC58074.1| polar amino acid ABC transporter, inner membrane subunit [Klebsiella variicola At-22] gi|289778503|gb|EFD86500.1| polar amino acid transport system permease [Klebsiella sp. 1_1_55] Length = 254 Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 46/131 (35%), Positives = 77/131 (58%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+S +A++ A+++EI R+G+ ++ +GQMEA+ ALG+ K R V+LPQA R I+P Sbjct: 122 FLSCIVAITLNAGAYVSEIFRAGIQSIDKGQMEASRALGMPWWKTMRKVILPQAFRRILP 181 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PL + + ++K+SSLA A+G ADL T+ E L +Y ++ ++A + Sbjct: 182 PLGNNAIAIVKDSSLASAIGLADLAYAARTVSGAYATYWEPYLTISLVYWVITFLLAQLV 241 Query: 386 NRLNAKIALKE 396 NRL + + Sbjct: 242 NRLEKRFGKSD 252 >gi|152970647|ref|YP_001335756.1| amino acid ABC transporter [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238895146|ref|YP_002919881.1| amino acid ABC transport system inner membrane component [Klebsiella pneumoniae NTUH-K2044] gi|330012781|ref|ZP_08307485.1| ABC transporter, permease protein [Klebsiella sp. MS 92-3] gi|150955496|gb|ABR77526.1| amino acid ABC transporter [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238547463|dbj|BAH63814.1| amino acid ABC transport system inner membrane component [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] gi|328533704|gb|EGF60398.1| ABC transporter, permease protein [Klebsiella sp. MS 92-3] Length = 254 Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 46/126 (36%), Positives = 76/126 (60%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+S +A++ A+++EI R+G+ ++ +GQMEA+ ALG+ K R V+LPQA R I+P Sbjct: 122 FLSCIVAITLNAGAYVSEIFRAGIQSIDKGQMEASRALGMPWWKTMRKVILPQAFRRILP 181 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PL + + ++K+SSLA A+G ADL T+ E L +Y ++ ++A + Sbjct: 182 PLGNNAIAIVKDSSLASAIGLADLAYAARTVSGAYATYWEPYLTISLVYWVITFLLAQLV 241 Query: 386 NRLNAK 391 NRL + Sbjct: 242 NRLEKR 247 >gi|300725185|ref|YP_003714513.1| putative glutamate/aspartate ABC transporter membrane protein [Xenorhabdus nematophila ATCC 19061] gi|297631730|emb|CBJ92449.1| putative glutamate/aspartate transport protein (ABC superfamily, membrane) [Xenorhabdus nematophila ATCC 19061] Length = 245 Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 46/113 (40%), Positives = 75/113 (66%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 EF++ +I L+ Y+A F+AE +R+G+ V RGQ AA ALGLT ++ R V+LPQA++ + Sbjct: 113 EFLAGFIGLTLYSAPFVAEELRAGIQGVGRGQKYAAHALGLTGWQSMRHVVLPQALKIAM 172 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377 PPL QY+N++KNSSL +A+G A+L + +T + E + +Y+++ Sbjct: 173 PPLLGQYMNIVKNSSLTMAIGVAELSYASRQVETETLKTFEAFGVATILYIAI 225 Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 28/85 (32%), Positives = 45/85 (52%) Query: 73 DQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVY 132 +Q I + Y + GF+ T WL+ ++ +T++G ++ A R S K + W+ +Y Sbjct: 3 EQFITEHLLAPEYLQWLWQGFLLTLWLSACAIVSSTLLGFVIAAARDSQIKPLRWLVTIY 62 Query: 133 VEVFRNIPPLVVIFFLYKSVLSVLP 157 VFRN P LV +FF Y + LP Sbjct: 63 TTVFRNTPLLVQLFFWYFASGQTLP 87 >gi|197286728|ref|YP_002152600.1| amino acid ABC transporter permease [Proteus mirabilis HI4320] gi|227355082|ref|ZP_03839493.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Proteus mirabilis ATCC 29906] gi|194684215|emb|CAR45713.1| putative amino acid ABC transporter, permease protein [Proteus mirabilis HI4320] gi|227164869|gb|EEI49716.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Proteus mirabilis ATCC 29906] Length = 245 Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 45/90 (50%), Positives = 65/90 (72%) Query: 260 STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319 S S EF++ I L+ Y+ FIA+ +R+G+ V +GQ AA+ALGLTH ++ R V+LPQA Sbjct: 108 SWPSFEFLAGIIGLTFYSVPFIAQELRAGIQGVRQGQKYAALALGLTHWQSMRYVILPQA 167 Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349 R +PPL QY+N++KNSSL +A+G A+L Sbjct: 168 FRIALPPLLGQYMNIIKNSSLTMAIGVAEL 197 Score = 43.9 bits (102), Expect = 0.041, Method: Compositional matrix adjust. Identities = 26/79 (32%), Positives = 42/79 (53%) Query: 79 YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138 Y + Y + + GF+ T ++F +I AT++G L+ A S + W +Y +FRN Sbjct: 9 YLLEPHYLSWLWQGFLITLLISFWTIIIATLLGFLLSAAYDSHIAPLRWCAAIYTSLFRN 68 Query: 139 IPPLVVIFFLYKSVLSVLP 157 P LV +FF Y + +LP Sbjct: 69 TPLLVQLFFWYFASGELLP 87 >gi|238750581|ref|ZP_04612081.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Yersinia rohdei ATCC 43380] gi|238711229|gb|EEQ03447.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Yersinia rohdei ATCC 43380] Length = 239 Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 44/133 (33%), Positives = 80/133 (60%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+S +A++ A+++EI R+G+ ++ RGQMEA+ +LG+++ K R V+LPQA R ++P Sbjct: 106 FLSCVVAITLNAGAYVSEIFRAGIQSIDRGQMEASRSLGMSYGKTMRKVILPQAFRRMLP 165 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PL + + ++K+SSLA A+G ADL T+ E LI IY ++ +++L + Sbjct: 166 PLGNNAIAIVKDSSLASAIGLADLAYAARTVSGAYATYWEPYLIISLIYWVITFLLSLLV 225 Query: 386 NRLNAKIALKEKK 398 + + + + Sbjct: 226 RHMEKRFGKSDSR 238 >gi|170683230|ref|YP_001742770.1| glutamate/aspartate ABC transporter permease GltK [Escherichia coli SMS-3-5] gi|170520948|gb|ACB19126.1| glutamate/aspartate ABC transporter, permease protein GltK [Escherichia coli SMS-3-5] Length = 224 Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 44/129 (34%), Positives = 80/129 (62%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 +S +A S + AA+ +EI+R+G+ ++ RGQ AA+ALG+ H ++ +L++LPQA R+++ Sbjct: 96 RLISAMVAFSMFEAAYYSEIIRAGIQSISRGQSSAALALGMNHWQSMKLIILPQAFRAMV 155 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 P L +Q + L +++SL + AD TI + G +E+IL F+Y +S+ +L Sbjct: 156 PLLLTQGIVLFQDTSLVYVLSLADFFRTASTIGERDGTQVEMILFAGFVYFVISLSASLL 215 Query: 385 MNRLNAKIA 393 ++ L + A Sbjct: 216 VSYLKRRTA 224 Score = 41.2 bits (95), Expect = 0.27, Method: Compositional matrix adjust. Identities = 29/92 (31%), Positives = 49/92 (53%), Gaps = 10/92 (10%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G V T + + ++ + GT++ RLS+ VAW + YV VFR+IP ++V+ + Sbjct: 16 LLDGLVITLKITVTAVVIGILWGTMLAVMRLSSFAPVAWFAKAYVNVFRSIPLVMVLLWF 75 Query: 149 Y-------KSVLSVLPIPD---HSIVLPFGMF 170 Y ++VL + P D S ++ F MF Sbjct: 76 YLIVPGFLQNVLGLSPKNDIRLISAMVAFSMF 107 >gi|255318802|ref|ZP_05360028.1| polar amino acid ABC transporter, inner membrane subunit [Acinetobacter radioresistens SK82] gi|255304058|gb|EET83249.1| polar amino acid ABC transporter, inner membrane subunit [Acinetobacter radioresistens SK82] Length = 247 Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 48/133 (36%), Positives = 81/133 (60%) Query: 260 STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319 S+ + +S + L +TAA + E VR+G+ A+PRGQ+ A A+G + + R V+LPQ+ Sbjct: 105 SSNASALISASVGLGLFTAARVCEQVRTGIEALPRGQINAGYAMGFSTSQLYRYVILPQS 164 Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379 R+I+PPL+S+ N +KN+S+A VG A+++S TI T IEI I++ +++ Sbjct: 165 FRTILPPLSSELTNCVKNTSVASLVGVAEIISQMKTISEYTQNTIEIYTFVTLIFIVINV 224 Query: 380 MIALFMNRLNAKI 392 + L M L ++ Sbjct: 225 CLILLMTLLEHRL 237 Score = 37.4 bits (85), Expect = 4.1, Method: Compositional matrix adjust. Identities = 24/78 (30%), Positives = 40/78 (51%) Query: 82 DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141 DS+Y +L+G +A A ++G+++G R +K I YV +FRN+P Sbjct: 18 DSTYLQWVLIGLGWLLVIALVAWSIAMVLGSILGIMRTLPSKTARTIGTAYVTLFRNVPL 77 Query: 142 LVVIFFLYKSVLSVLPIP 159 L+ +F + V + LP P Sbjct: 78 LIQLFIWFYVVPNFLPGP 95 >gi|288575077|ref|ZP_06393434.1| polar amino acid ABC transporter, inner membrane subunit [Dethiosulfovibrio peptidovorans DSM 11002] gi|288570818|gb|EFC92375.1| polar amino acid ABC transporter, inner membrane subunit [Dethiosulfovibrio peptidovorans DSM 11002] Length = 520 Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 57/135 (42%), Positives = 83/135 (61%), Gaps = 8/135 (5%) Query: 229 IFGLPTLVLIALKY-QLHFDKPVLGQ--FNFIG----GSTVSPEFMSLYIALSCYTAAFI 281 +FG L +++ Y ++ PVL Q F F G G + P F + I L AA+ Sbjct: 329 VFGPAPLAVLSTWYVEIIRGTPVLIQLFFIFYGLPNVGIKLDP-FTAGVIGLGLNYAAYE 387 Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341 AEI R+GL+AVP GQMEAA+ LG+T R+A R V++PQA+R ++PP+T+ +++LLK+SSL Sbjct: 388 AEIYRAGLMAVPAGQMEAALGLGMTRREALRHVVVPQAVRMVLPPVTNDFISLLKDSSLV 447 Query: 342 VAVGFADLVSVGGTI 356 + DL G I Sbjct: 448 SVITLVDLTKAYGQI 462 >gi|94987195|ref|YP_595128.1| ABC-type amino acid transport system, permease component [Lawsonia intracellularis PHE/MN1-00] gi|94731444|emb|CAJ54807.1| ABC-type amino acid transport system, permease component [Lawsonia intracellularis PHE/MN1-00] Length = 230 Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 60/181 (33%), Positives = 101/181 (55%), Gaps = 12/181 (6%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 + L ++Y+ +I G P +VL+ L+F P+ + + P + + IA+ Sbjct: 54 RTLAVIYVE--IIRGTPLIVLVMF---LYFALPLALDIH------IPPNWAGV-IAIGVN 101 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 + A+IAEIVR +I++ GQMEAA + GLTH +A ++ PQA R +IPPLT+Q + LK Sbjct: 102 SGAYIAEIVRGSIISISHGQMEAARSTGLTHAQAMLYIIWPQAFRRMIPPLTNQCIISLK 161 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 ++SL V +G +L G II+ +A E+ L YL +++ I+ + L ++ L Sbjct: 162 DTSLLVVIGVGELTRQGQEIISVNFRAFEVWLTVAIFYLIMTLSISALLKYLERRLVLPG 221 Query: 397 K 397 + Sbjct: 222 R 222 >gi|149021568|ref|ZP_01835623.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP23-BS72] gi|147930264|gb|EDK81249.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP23-BS72] Length = 225 Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 50/131 (38%), Positives = 77/131 (58%), Gaps = 3/131 (2%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P + + + + Y A+IAE++RSG+ ++P GQMEAA++ G T+ A RL++LPQA R I Sbjct: 91 PFYWTAVLCVGLYHGAYIAEVIRSGIQSIPSGQMEAALSQGFTYISAMRLIILPQAFRII 150 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 +PPLT+Q +NL+KN+S + DL+ V + G I L +Y +L +A Sbjct: 151 LPPLTNQIVNLIKNTSTVAIISGVDLMFVTKSWSALNGNYIPGFLGAALLYFALCFPVAQ 210 Query: 384 F---MNRLNAK 391 F M + N K Sbjct: 211 FGRKMEQANKK 221 Score = 38.1 bits (87), Expect = 2.4, Method: Compositional matrix adjust. Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 5/77 (6%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151 GF+ T LA I A ++G GA S ++ + R++VE ++N P LV ++ Sbjct: 20 GFLFTLALAVGSFILAMVLGIFFGAMSTSKRPILRILARIFVEFYQNTPLLVQFVIVFYG 79 Query: 152 VLSVLP-IPDHSIVLPF 167 LP I DH I++PF Sbjct: 80 ----LPLISDHIIMIPF 92 >gi|297531646|ref|YP_003672921.1| polar amino acid ABC transporter inner membrane protein [Geobacillus sp. C56-T3] gi|297254898|gb|ADI28344.1| polar amino acid ABC transporter, inner membrane subunit [Geobacillus sp. C56-T3] Length = 218 Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 45/125 (36%), Positives = 82/125 (65%) Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326 +SL ++LS +AA++AEI R+G+ ++ +GQMEAA +LG+TH +A R ++LPQA++ +IPP Sbjct: 90 VSLAVSLSLNSAAYVAEIFRAGIQSIDKGQMEAARSLGMTHAQAMRYIILPQALKRMIPP 149 Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386 ++++ L+K+SSL + + +++ G + + E L FIYL L++ ++ + Sbjct: 150 FANEFIVLIKDSSLGMVIAAPEIMYWGKAAAGEYYRVWEPYLTVAFIYLILTLSLSKLSH 209 Query: 387 RLNAK 391 L K Sbjct: 210 YLERK 214 Score = 37.4 bits (85), Expect = 3.7, Method: Compositional matrix adjust. Identities = 21/70 (30%), Positives = 36/70 (51%) Query: 84 SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143 YA G + T ++ +G+I I+G +G G++S N+LV Y+ FR P +V Sbjct: 10 EYAPYFFQGLLATIGVSLAGIIFGLILGLFIGLGKMSTNRLVRLPFSWYINFFRGTPLVV 69 Query: 144 VIFFLYKSVL 153 I ++ V+ Sbjct: 70 QILLVHFGVM 79 >gi|170691225|ref|ZP_02882390.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia graminis C4D1M] gi|170143430|gb|EDT11593.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia graminis C4D1M] Length = 222 Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 45/129 (34%), Positives = 84/129 (65%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P F+ + L Y+AA+++EIVR + +V RGQMEAA ++G++ +A R ++LPQA+ + Sbjct: 87 PAFLCGMLGLGLYSAAYVSEIVRGAIQSVDRGQMEAARSIGMSSGQAMRAIILPQAIVRM 146 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 IPPL ++++ L+KNS+L + DL+ G II+ + +++E+ L +YL L+ + Sbjct: 147 IPPLGNEFIALIKNSALVSLLTIDDLMHEGQKIISVSYRSLEVYLAIALVYLVLTQVTNF 206 Query: 384 FMNRLNAKI 392 ++R+ ++ Sbjct: 207 ALHRVERRL 215 >gi|119963944|ref|YP_948499.1| glutamate permease [Arthrobacter aurescens TC1] gi|119950803|gb|ABM09714.1| Glutamate permease [Arthrobacter aurescens TC1] Length = 216 Score = 90.1 bits (222), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 54/127 (42%), Positives = 81/127 (63%), Gaps = 1/127 (0%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IALS YTAAFIAE VRSG+ +VP GQ EAA ++G+T + ++LPQA+R++IPPL + Sbjct: 90 IALSSYTAAFIAEAVRSGVNSVPVGQAEAARSVGMTFTQVLGFIVLPQAVRTVIPPLINI 149 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTG-QAIEIILIWMFIYLSLSIMIALFMNRLN 389 + L+KNSS+A A +L G + N G Q + I+L F YL +++ + L + + Sbjct: 150 LIALVKNSSVAGAFFVLELFGYGRQLSNDYGNQVLWILLGVAFFYLLITVPLGLLAHFVE 209 Query: 390 AKIALKE 396 K+A+ Sbjct: 210 RKVAIAR 216 Score = 37.0 bits (84), Expect = 4.8, Method: Compositional matrix adjust. Identities = 26/62 (41%), Positives = 34/62 (54%), Gaps = 1/62 (1%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151 GF+ T +L+ I A I+GTL+ A R+S + YVEV RN PL +IFF Sbjct: 14 GFLRTLYLSVISGIIALIVGTLLAAMRVSPVAALRGFSMFYVEVARNT-PLTIIFFFAAI 72 Query: 152 VL 153 VL Sbjct: 73 VL 74 >gi|313890243|ref|ZP_07823877.1| ABC transporter, permease protein [Streptococcus pseudoporcinus SPIN 20026] gi|313121348|gb|EFR44453.1| ABC transporter, permease protein [Streptococcus pseudoporcinus SPIN 20026] Length = 234 Score = 90.1 bits (222), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 46/116 (39%), Positives = 80/116 (68%), Gaps = 8/116 (6%) Query: 243 QLHFDKPVLGQFNFI--GGSTVSPE---FMSLYIALSC---YTAAFIAEIVRSGLIAVPR 294 +L+ + P+L Q F+ G + +S F S + A+ C Y A+IAE++RSG+ AVP+ Sbjct: 71 ELYQNTPLLVQLVFVYYGLAIISRGHIMFSSFFTAILCVGVYHGAYIAEVIRSGIEAVPK 130 Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 GQ+EA+++ G T+ + L++LPQA+R+I+PP+T+Q +NL+KN+S+ + AD++ Sbjct: 131 GQIEASLSQGFTYEQTMSLIVLPQAVRTILPPMTNQVVNLIKNTSIVAIISGADIM 186 >gi|163853362|ref|YP_001641405.1| polar amino acid ABC transporter, inner membrane subunit [Methylobacterium extorquens PA1] gi|240140778|ref|YP_002965258.1| glutamate and aspartate transporter subunit ; membrane component of ABC superfamily [Methylobacterium extorquens AM1] gi|254563288|ref|YP_003070383.1| glutamate/aspartate ABC transporter permease [Methylobacterium extorquens DM4] gi|163664967|gb|ABY32334.1| polar amino acid ABC transporter, inner membrane subunit [Methylobacterium extorquens PA1] gi|240010755|gb|ACS41981.1| glutamate and aspartate transporter subunit ; membrane component of ABC superfamily [Methylobacterium extorquens AM1] gi|254270566|emb|CAX26569.1| glutamate/aspartate transport protein, ABC superfamily, permease component [Methylobacterium extorquens DM4] Length = 230 Score = 90.1 bits (222), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 61/211 (28%), Positives = 110/211 (52%), Gaps = 12/211 (5%) Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYIS---------TFLIFGLPTLVLIALKYQLHFD 247 G+V +L T L+ G L LL +S F + + +L L+ + + +F Sbjct: 21 GMVFTLTLTALAASGGIVLGTGLALLRLSGVPGLTHAAKFYVELMRSLPLVLVIFWFYFL 80 Query: 248 KPVLGQFNFIGGST--VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305 P LG + IG T F S + + + AA+ +EIVR+G+ ++P+GQ AA ALG+ Sbjct: 81 VPYLGAWA-IGADTPIQVGAFASALVTFTLFEAAYFSEIVRAGIQSIPKGQSAAARALGM 139 Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365 ++ + RLV+LPQA R+++P L +Q + L +++SL + D + + + G+ +E Sbjct: 140 SYAQVMRLVVLPQAFRNMVPLLLTQTIVLFQDTSLVYVLSLTDFLGAASKVAQRDGRLVE 199 Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 + L +Y ++ +L + RL A+ A+ Sbjct: 200 MYLFAALVYFAVCFAASLLVRRLQARTAIAR 230 >gi|282882686|ref|ZP_06291296.1| arginine transport system permease protein ArtQ [Peptoniphilus lacrimalis 315-B] gi|300814297|ref|ZP_07094569.1| putative arginine ABC transporter, permease protein ArtQ [Peptoniphilus sp. oral taxon 836 str. F0141] gi|281297499|gb|EFA89985.1| arginine transport system permease protein ArtQ [Peptoniphilus lacrimalis 315-B] gi|300511564|gb|EFK38792.1| putative arginine ABC transporter, permease protein ArtQ [Peptoniphilus sp. oral taxon 836 str. F0141] Length = 225 Score = 90.1 bits (222), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 49/123 (39%), Positives = 81/123 (65%), Gaps = 4/123 (3%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +++S +AA++AEI+RSG+ +V GQMEAA +LGLT +A R ++LPQA+++I+P L ++ Sbjct: 101 LSISLNSAAYVAEIIRSGINSVDNGQMEAARSLGLTRSQAMRKIILPQAVKNILPALVNE 160 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL----SLSIMIALFMN 386 ++ L+K SS+ VG A+L+ G +I + T QA+ + IY SLS + + Sbjct: 161 FITLIKESSIVYTVGVAELMYSGKSIASATYQAVRPFIYAAIIYFIMTYSLSKALQVLER 220 Query: 387 RLN 389 RL+ Sbjct: 221 RLS 223 Score = 38.5 bits (88), Expect = 1.7, Method: Compositional matrix adjust. Identities = 23/70 (32%), Positives = 37/70 (52%) Query: 88 AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147 A L G T L+ G+I IG ++ ++S NKL+ +I Y+E+ R P LV I Sbjct: 17 AYLKGAGVTIKLSLIGVILGLTIGIVLALMKISKNKLLKFIASAYIEIVRGTPMLVQIMI 76 Query: 148 LYKSVLSVLP 157 +Y + ++P Sbjct: 77 VYFGLKKIIP 86 >gi|295677662|ref|YP_003606186.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. CCGE1002] gi|295437505|gb|ADG16675.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. CCGE1002] Length = 225 Score = 90.1 bits (222), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 44/126 (34%), Positives = 79/126 (62%) Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327 S +A S + AA+ +EI+R+G+ AVPRGQ+ AA ALG+T+ ++ RL++LPQA R+++P L Sbjct: 99 SAMVAFSLFEAAYYSEIIRAGIQAVPRGQVNAAFALGMTYGQSMRLIVLPQAFRAMVPLL 158 Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387 +Q + L +++SL + AD I ++ G +E++L +Y + ++ + + Sbjct: 159 LTQGIVLFQDTSLVYVISLADFFRTATNIGDRDGTNVEMVLFAGAVYFVICVIASSLVKG 218 Query: 388 LNAKIA 393 L K+A Sbjct: 219 LQKKVA 224 >gi|261420863|ref|YP_003254545.1| polar amino acid ABC transporter inner membrane subunit [Geobacillus sp. Y412MC61] gi|319768534|ref|YP_004134035.1| polar amino acid ABC transporter inner membrane protein [Geobacillus sp. Y412MC52] gi|261377320|gb|ACX80063.1| polar amino acid ABC transporter, inner membrane subunit [Geobacillus sp. Y412MC61] gi|317113400|gb|ADU95892.1| polar amino acid ABC transporter, inner membrane subunit [Geobacillus sp. Y412MC52] Length = 218 Score = 90.1 bits (222), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 45/125 (36%), Positives = 82/125 (65%) Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326 +SL ++LS +AA++AEI R+G+ ++ +GQMEAA +LG+TH +A R ++LPQA++ +IPP Sbjct: 90 VSLAVSLSLNSAAYVAEIFRAGIQSIDKGQMEAARSLGMTHAQAMRYIILPQALKRMIPP 149 Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386 ++++ L+K+SSL + + +++ G + + E L FIYL L++ ++ + Sbjct: 150 FANEFIVLIKDSSLGMVIAAPEIMYWGKAAAGEYYRVWEPYLTVAFIYLILTLSLSKLSH 209 Query: 387 RLNAK 391 L K Sbjct: 210 YLERK 214 >gi|296110978|ref|YP_003621359.1| glutamine ABC transporter, permease protein [Leuconostoc kimchii IMSNU 11154] gi|295832509|gb|ADG40390.1| glutamine ABC transporter, permease protein [Leuconostoc kimchii IMSNU 11154] Length = 213 Score = 90.1 bits (222), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 50/127 (39%), Positives = 77/127 (60%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F S +AL YT+AFIAE VR+G+++V GQME A A GL+ +A + ++LPQA R +P Sbjct: 83 FTSGTVALMLYTSAFIAETVRAGILSVDSGQMEGARANGLSFAQAMQHIVLPQAFRISLP 142 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 L +Q++NL+KNSS+ VG DL+ G + T +I YL +++ ++ +M Sbjct: 143 SLGNQFINLVKNSSILAFVGGLDLMYQGNMVAANTFDTFSTYIIVAIFYLVITLPLSYYM 202 Query: 386 NRLNAKI 392 L K+ Sbjct: 203 QHLEQKL 209 Score = 37.0 bits (84), Expect = 5.0, Method: Compositional matrix adjust. Identities = 20/60 (33%), Positives = 32/60 (53%) Query: 90 LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 L GF T + ++ + I+GT ++ K I +YV+VFRNIP L++ FF + Sbjct: 12 LQGFGYTLLSSLIALVGSMILGTGFAIMQIVPQKWAQKIGNIYVQVFRNIPLLIITFFFF 71 >gi|225870042|ref|YP_002745989.1| amino acid ABC transporter permease protein [Streptococcus equi subsp. equi 4047] gi|225699446|emb|CAW92946.1| putative amino acid ABC transporter permease protein [Streptococcus equi subsp. equi 4047] Length = 227 Score = 90.1 bits (222), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 67/218 (30%), Positives = 121/218 (55%), Gaps = 18/218 (8%) Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240 +TM +A + F ++G++++L + H K L LY+ F G P +V I + Sbjct: 19 VTMMISACVVFFGTIIGLLVTLI-----KRSHIKPLSWLVSLYVWIFR--GTPMVVQIMI 71 Query: 241 KYQ-LHF-DKPVLGQFNFIGGSTVSPEFMSLY---IALSCYTAAFIAEIVRSGLIAVPRG 295 + LHF D P+ +G + +F L I +S + A+I+EIVR+G+ AVP+G Sbjct: 72 AFAWLHFNDLPI------VGFGVLDLDFSRLLPGIIIISLNSGAYISEIVRAGIEAVPKG 125 Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355 Q+EAA +LG+ + A R V+LPQA ++I+P L ++ + ++K+S+L +G +L + + Sbjct: 126 QLEAAYSLGIRPKNAMRYVILPQAFKNILPALGNELITIIKDSALLQTIGVMELWNGAQS 185 Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393 ++ T I +L F YL ++ +++ + L K+A Sbjct: 186 VVTATYLPITPLLFAAFYYLMITTILSQLLGCLERKLA 223 >gi|119896732|ref|YP_931945.1| putative glutamine transport permease [Azoarcus sp. BH72] gi|119669145|emb|CAL93058.1| putative glutamine transport permease protein [Azoarcus sp. BH72] Length = 245 Score = 90.1 bits (222), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 54/125 (43%), Positives = 73/125 (58%), Gaps = 4/125 (3%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P F++ I L YTAA IAE V+SG+ A+ RGQ A +ALG T + R V LP A R + Sbjct: 104 PYFVTAVIGLGLYTAARIAEQVKSGINALARGQRFAGLALGFTEWQTYRYVRLPMAYRIV 163 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 +P LTS+ +N+ KNS++ AVG +L II +T Q +EI ++ Y L A Sbjct: 164 LPALTSEAMNIFKNSAVTYAVGILELYFQYKQIIEKTSQVLEITIVVTLTYFVL----AF 219 Query: 384 FMNRL 388 MNRL Sbjct: 220 AMNRL 224 Score = 38.9 bits (89), Expect = 1.5, Method: Compositional matrix adjust. Identities = 24/87 (27%), Positives = 46/87 (52%), Gaps = 7/87 (8%) Query: 71 EIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICR 130 E D G+ Y ++ G T ++ S + A ++G+++G R + +KL+ I Sbjct: 13 ETDDGL-------KYIDWVISGMGWTTAVSLSALAIALLVGSVLGVMRTTPSKLLVAIGD 65 Query: 131 VYVEVFRNIPPLVVIFFLYKSVLSVLP 157 YV++FRN+P +V +F + V ++P Sbjct: 66 TYVDIFRNVPLIVQLFMWFFVVPELVP 92 >gi|227872730|ref|ZP_03991055.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Oribacterium sinus F0268] gi|227841425|gb|EEJ51730.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Oribacterium sinus F0268] Length = 229 Score = 90.1 bits (222), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 56/209 (26%), Positives = 112/209 (53%), Gaps = 16/209 (7%) Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF---LIFGLPTLVLIALKYQLHFDK 248 F+ V+G+ L F + R +++TGK I F ++ G P ++ + + Y F Sbjct: 33 FALVIGVALG-FIIGMVRSTYDRTGKGKIANGICQFYLTIMRGTPAVIQLMIFYYCIFTS 91 Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308 + S F+ + IA +AA++AEI+RSG++++P+GQMEA +LG ++ Sbjct: 92 RIF-----------SGVFVGI-IAFGLNSAAYVAEIIRSGIMSIPKGQMEAGRSLGFSYG 139 Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368 + R +++PQA+R+++P + ++++ L+K +++A V DL G + ++T + +L Sbjct: 140 ETMRYIIMPQAVRNVLPAIFNEFIVLIKETAVAGYVAVQDLTKAGDIVRSRTYDSWTPLL 199 Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKEK 397 IYL L++ + ++ KE+ Sbjct: 200 TVALIYLILTMFFSFLEKKMEEAFQRKER 228 >gi|111023904|ref|YP_706876.1| glutamate transport system permease protein GluD [Rhodococcus jostii RHA1] gi|110823434|gb|ABG98718.1| probable glutamate transport system permease protein GluD [Rhodococcus jostii RHA1] Length = 275 Score = 90.1 bits (222), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 63/203 (31%), Positives = 113/203 (55%), Gaps = 20/203 (9%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 V S V G++L+ A R+S + + + +++ F GLP LVLI + + P Sbjct: 90 VLSVVFGMILA--AMRMS---DSRLLRGVVRVWVEIF--RGLPLLVLI---FFIFLGAP- 138 Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 QF I P F +L + +S Y +A ++EI R+G+ ++PRGQ EAA A+G+ + Sbjct: 139 --QFGII-----VPTFWALALGISLYNSAVMSEIFRAGIASLPRGQAEAAAAIGMRKTQI 191 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ--AIEIIL 368 R++LLPQ +R ++P L SQ + ++K +SL +G+ +L+ G + G AI + + Sbjct: 192 FRIILLPQGIRIMLPALISQVVTIVKETSLGFVIGYTELLRSGRVAVEYLGGQYAIPVYV 251 Query: 369 IWMFIYLSLSIMIALFMNRLNAK 391 + IYL +++ ++ R++A+ Sbjct: 252 LIAIIYLLMNVGLSKLARRIDAR 274 Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust. Identities = 26/85 (30%), Positives = 48/85 (56%), Gaps = 6/85 (7%) Query: 82 DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141 D ++L G + T A ++ + + G ++ A R+S ++L+ + RV+VE+FR +P Sbjct: 67 DRDLMRSVLKGLLATIQCAIVSIVLSVVFGMILAAMRMSDSRLLRGVVRVWVEIFRGLPL 126 Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLP 166 LV+IFF++ L P I++P Sbjct: 127 LVLIFFIF------LGAPQFGIIVP 145 >gi|289422748|ref|ZP_06424588.1| amino acid ABC transporter, permease protein [Peptostreptococcus anaerobius 653-L] gi|289156927|gb|EFD05552.1| amino acid ABC transporter, permease protein [Peptostreptococcus anaerobius 653-L] Length = 221 Score = 90.1 bits (222), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 61/200 (30%), Positives = 113/200 (56%), Gaps = 11/200 (5%) Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFN 255 LG + L A + + + K + +YI +I P ++ +A+ ++F P LG N Sbjct: 28 LGFFVGLIAC-IGKISNSKVASIIASIYIE--VIRDTPLMIQLAI---IYFGLPSLG-VN 80 Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315 F + EF + AL+ + A++AEI+RSG+ AV +GQMEA+ +LGL + +A R V+ Sbjct: 81 FPSLFGLPEEFTAGVFALTLNSGAYVAEIMRSGIQAVNKGQMEASRSLGLNYWQAMRYVI 140 Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ----AIEIILIWM 371 +PQA+++I+P L +++++L+K S++ VG DL ++ N TG I +++ Sbjct: 141 VPQAVKNILPALANEFISLIKESAIVSVVGITDLTFFASSVKNSTGDFFGPYIFAAVVYF 200 Query: 372 FIYLSLSIMIALFMNRLNAK 391 I +LS ++ L +++ + Sbjct: 201 VITFTLSKLVGLLEKKMSTE 220 >gi|16079798|ref|NP_390622.1| glutamine ABC transporter permease [Bacillus subtilis subsp. subtilis str. 168] gi|221310681|ref|ZP_03592528.1| glutamine ABC transporter (integral membrane protein) [Bacillus subtilis subsp. subtilis str. 168] gi|221315004|ref|ZP_03596809.1| glutamine ABC transporter (integral membrane protein) [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221319925|ref|ZP_03601219.1| glutamine ABC transporter (integral membrane protein) [Bacillus subtilis subsp. subtilis str. JH642] gi|221324206|ref|ZP_03605500.1| glutamine ABC transporter (integral membrane protein) [Bacillus subtilis subsp. subtilis str. SMY] gi|81815748|sp|O34671|GLNM_BACSU RecName: Full=Probable glutamine ABC transporter permease protein glnM gi|2635190|emb|CAB14686.1| glutamine ABC transporter (permease) [Bacillus subtilis subsp. subtilis str. 168] gi|28375454|emb|CAA93319.1| integral membrane protein [Bacillus subtilis subsp. subtilis str. 168] Length = 216 Score = 90.1 bits (222), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 48/127 (37%), Positives = 82/127 (64%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + +AL+ YT+AFIAE +R+G+ +V +GQMEAA + G T+ +A ++LPQA++ +IP Sbjct: 86 FQAGTVALTIYTSAFIAEAIRAGIQSVSKGQMEAARSSGFTYSQAMLHIILPQAIKIVIP 145 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PL +Q+LNL+KNSS+ V DL+ + + T ++ + YL L+I +++ + Sbjct: 146 PLGNQFLNLVKNSSILGVVAGLDLMYQADLVSSSTLVVFDVYIFVALFYLVLTIPLSIGV 205 Query: 386 NRLNAKI 392 N L ++ Sbjct: 206 NYLEKRL 212 Score = 36.2 bits (82), Expect = 9.8, Method: Compositional matrix adjust. Identities = 18/58 (31%), Positives = 30/58 (51%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 GF +T + + + ++G V R++ K + W+ YVE RNIP L++ F Y Sbjct: 16 GFYHTLLASVIALAGSFVLGVAVAVMRITVFKPLQWLGTAYVEFIRNIPLLLITFVFY 73 >gi|321312270|ref|YP_004204557.1| glutamine ABC transporter permease [Bacillus subtilis BSn5] gi|320018544|gb|ADV93530.1| glutamine ABC transporter (permease) [Bacillus subtilis BSn5] Length = 216 Score = 90.1 bits (222), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 48/127 (37%), Positives = 82/127 (64%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + +AL+ YT+AFIAE +R+G+ +V +GQMEAA + G T+ +A ++LPQA++ +IP Sbjct: 86 FQAGTVALTIYTSAFIAEAIRAGIQSVSKGQMEAARSSGFTYSQAMLHIILPQAIKIVIP 145 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PL +Q+LNL+KNSS+ V DL+ + + T ++ + YL L+I +++ + Sbjct: 146 PLGNQFLNLVKNSSILGVVAGLDLMYQADLVSSSTLVVFDVYIFVALFYLVLTIPLSIGV 205 Query: 386 NRLNAKI 392 N L ++ Sbjct: 206 NYLEKRL 212 Score = 37.7 bits (86), Expect = 3.5, Method: Compositional matrix adjust. Identities = 19/58 (32%), Positives = 31/58 (53%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 GF +T + + + ++G V R++ K + W+ VYVE RNIP L++ F Y Sbjct: 16 GFYHTLLASVIALAGSFVLGVAVAVMRITVFKPLQWLGTVYVEFIRNIPLLLITFVFY 73 >gi|227113890|ref|ZP_03827546.1| binding-protein-dependent transport system inner membrane component [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 247 Score = 90.1 bits (222), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 44/85 (51%), Positives = 63/85 (74%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 EF++ L+ Y++AFIAE +RSG+ V RGQ AA ALGLT ++ R V+LPQA++ + Sbjct: 115 EFLAGLAGLTLYSSAFIAEEIRSGVRGVARGQKYAAHALGLTGWQSMRYVVLPQALKIAL 174 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADL 349 PPL QY+N++KNSSL +A+G A+L Sbjct: 175 PPLLGQYMNIVKNSSLTMAIGVAEL 199 Score = 37.4 bits (85), Expect = 3.9, Method: Compositional matrix adjust. Identities = 21/66 (31%), Positives = 37/66 (56%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151 GF+ T ++ S ++ +T++G L+ A R S +++ + Y +FRN P LV +FF Y Sbjct: 24 GFLITLGISLSTIVLSTVLGFLLAAARDSQIRVLRGVVVAYSSLFRNTPLLVQLFFWYFG 83 Query: 152 VLSVLP 157 + P Sbjct: 84 AGQLFP 89 >gi|170703107|ref|ZP_02893926.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria IOP40-10] gi|171321019|ref|ZP_02910006.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria MEX-5] gi|170131986|gb|EDT00495.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria IOP40-10] gi|171093716|gb|EDT38860.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria MEX-5] Length = 225 Score = 90.1 bits (222), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 43/108 (39%), Positives = 68/108 (62%) Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320 T+ S +A S + AA+ +EI+R+G+ AVPRGQM AA ALG+ + A RLV+LPQA Sbjct: 92 TIDIRLASAMVAFSLFEAAYYSEIIRAGIQAVPRGQMNAAFALGMNYAHAMRLVILPQAF 151 Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368 R+++P L +Q + L +++SL + AD I ++ G +E++L Sbjct: 152 RAMVPLLLTQAIVLFQDTSLVYVISLADFFRTAANIGDRDGTTVEMVL 199 Score = 40.0 bits (92), Expect = 0.61, Method: Compositional matrix adjust. Identities = 23/65 (35%), Positives = 37/65 (56%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151 G + TF + ++ + GTL+ RLS K +AW + YV VFR+IP ++V+ + + Sbjct: 19 GAIVTFKITLIAIVVGIVWGTLLALMRLSGVKPLAWFAKAYVTVFRSIPLVMVLLWFFLI 78 Query: 152 VLSVL 156 V VL Sbjct: 79 VPQVL 83 >gi|168490506|ref|ZP_02714649.1| ABC transporter membrane-spanning permease - glutamine transport [Streptococcus pneumoniae CDC0288-04] gi|183574954|gb|EDT95482.1| ABC transporter membrane-spanning permease - glutamine transport [Streptococcus pneumoniae CDC0288-04] Length = 225 Score = 90.1 bits (222), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 50/131 (38%), Positives = 76/131 (58%), Gaps = 3/131 (2%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P + + + + Y A+IAE++RSG+ ++P GQMEAA++ G T+ A RL+ LPQA R I Sbjct: 91 PIYWTAVLCVGLYHGAYIAEVIRSGIQSIPSGQMEAALSQGFTYISAMRLITLPQAFRII 150 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 +PPLT+Q +NL+KN+S + DL+ V + G I L +Y +L +A Sbjct: 151 LPPLTNQIVNLIKNTSTVAIISGVDLMFVTKSWSALNGNYIPAFLGAALLYFALCFPVAQ 210 Query: 384 F---MNRLNAK 391 F M + N K Sbjct: 211 FGRKMEQANKK 221 >gi|21228042|ref|NP_633964.1| glutamine transporter, permease protein [Methanosarcina mazei Go1] gi|20906475|gb|AAM31636.1| Glutamine transporter, permease protein [Methanosarcina mazei Go1] Length = 231 Score = 90.1 bits (222), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 46/125 (36%), Positives = 81/125 (64%) Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333 S + A+ AEIVR+G+ +V RGQMEAA +LG+T +A + V++PQA+R IIPPL ++++ Sbjct: 106 SINSGAYNAEIVRAGIKSVDRGQMEAARSLGMTEGQAMKEVIMPQAVRLIIPPLGNEFIA 165 Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393 LLK+SSL + +L G +++T A + F+YL+L++ I+ +N + ++ Sbjct: 166 LLKDSSLLAVISVHELSKNGMLYVSKTFAAFPTYISVAFVYLALTMGISRVLNHIERRLG 225 Query: 394 LKEKK 398 + ++ Sbjct: 226 VSDRS 230 >gi|254459832|ref|ZP_05073248.1| ABC-type glutamine transport system, permease component [Rhodobacterales bacterium HTCC2083] gi|206676421|gb|EDZ40908.1| ABC-type glutamine transport system, permease component [Rhodobacteraceae bacterium HTCC2083] Length = 255 Score = 90.1 bits (222), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 57/193 (29%), Positives = 101/193 (52%), Gaps = 18/193 (9%) Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265 RL + + +A+PLL + ++ +GLP +VL ++ + D Sbjct: 81 RLPSRIYIEFVRAIPLLPMLFWVFYGLP-VVLKSMGINISIDA----------------- 122 Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F I L+ +AF AEI RSG+ ++ +GQ EAA +GL + + R V+LPQA+R I+P Sbjct: 123 FWGAIITLAISDSAFTAEIYRSGIQSIAKGQTEAAKTVGLNYTQTMRYVILPQAIRRILP 182 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PL +Q++ ++K S+ A +G +L ++ + +EI + + YL L ++I+ F+ Sbjct: 183 PLANQFIYIVKMSAFASVIGMQELTRRANELVVTEYRPLEIYTLLILEYLVLVLIISFFV 242 Query: 386 NRLNAKIALKEKK 398 L K+ E + Sbjct: 243 RWLERKMGSDESR 255 >gi|70733920|ref|YP_257560.1| amino acid ABC transporter permease [Pseudomonas fluorescens Pf-5] gi|68348219|gb|AAY95825.1| amino acid ABC transporter, permease protein [Pseudomonas fluorescens Pf-5] Length = 320 Score = 90.1 bits (222), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 58/170 (34%), Positives = 102/170 (60%), Gaps = 7/170 (4%) Query: 233 PTLVLIALKY-QLHFDKPVLGQ---FNFIGGS--TVSPEFMSLYIALSCYTAAFIAEIVR 286 PTL ++ Y +L P+L Q F F G+ +S EF + ALS +T A++AEIVR Sbjct: 152 PTLRDLSTIYVELVRGTPLLVQIFIFYFFIGTVLNLSREFAGI-AALSLFTGAYVAEIVR 210 Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346 +G+ ++ RGQ EAA +LGL+ ++ R V+LPQA + ++PPL Q+++L+K++SL + Sbjct: 211 AGVQSIARGQNEAARSLGLSAGQSMRHVVLPQAFKRVLPPLAGQFISLVKDTSLVSVIAI 270 Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 +L+ G +I + EI+ +YL +++ ++ +RL ++A + Sbjct: 271 TELLKSGREVITTSFSPFEILFCVAGLYLLINLPLSKMASRLERRLAQSD 320 >gi|237741768|ref|ZP_04572249.1| amino acid transport system permease [Fusobacterium sp. 4_1_13] gi|256845096|ref|ZP_05550554.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Fusobacterium sp. 3_1_36A2] gi|294785616|ref|ZP_06750904.1| amino acid ABC transporter, permease/substrate-binding protein [Fusobacterium sp. 3_1_27] gi|229429416|gb|EEO39628.1| amino acid transport system permease [Fusobacterium sp. 4_1_13] gi|256718655|gb|EEU32210.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Fusobacterium sp. 3_1_36A2] gi|294487330|gb|EFG34692.1| amino acid ABC transporter, permease/substrate-binding protein [Fusobacterium sp. 3_1_27] Length = 236 Score = 89.7 bits (221), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 47/147 (31%), Positives = 87/147 (59%) Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309 +L F+G +P + IA + A++AEI+R+G+ + +GQMEA ALGL++ + Sbjct: 90 ILANLIFVGALRETPILLIGGIAFGLNSGAYVAEIIRAGIEGLDKGQMEAGRALGLSYSQ 149 Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369 R +++PQA+++I+P L S+++ LLK +S+ +G DL+ I +QT + +E +L Sbjct: 150 TMRKIIVPQAIKNILPALVSEFITLLKETSIIGFIGGIDLLRSASIITSQTYRGVEPLLA 209 Query: 370 WMFIYLSLSIMIALFMNRLNAKIALKE 396 IYL L+ + FM ++ + + + Sbjct: 210 VGIIYLILTSIFTAFMRKVERGLKVSD 236 >gi|302542601|ref|ZP_07294943.1| ABC-type amino acid transport system, permease component [Streptomyces hygroscopicus ATCC 53653] gi|302460219|gb|EFL23312.1| ABC-type amino acid transport system, permease component [Streptomyces himastatinicus ATCC 53653] Length = 312 Score = 89.7 bits (221), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 45/117 (38%), Positives = 73/117 (62%), Gaps = 3/117 (2%) Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 AA++AEI R+G+ +V GQ EAA ALG++H K R V+LPQAMR I+PP ++++N+LK Sbjct: 166 AAYMAEICRAGIQSVDEGQTEAAQALGMSHAKTLRRVVLPQAMRVIVPPTGNEFINMLKT 225 Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILI---WMFIYLSLSIMIALFMNRLNAK 391 +SL +AV + DL+ + +G E++ + W I S+ + ++ R A+ Sbjct: 226 TSLVIAVQYWDLLQATSEVGQNSGATAEMLFLAAAWYLILTSVLSVGQYYLERYYAR 282 >gi|307130486|ref|YP_003882502.1| amino acid ABC transporter permease [Dickeya dadantii 3937] gi|306528015|gb|ADM97945.1| amino acid ABC transporter permease [Dickeya dadantii 3937] Length = 237 Score = 89.7 bits (221), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 67/182 (36%), Positives = 97/182 (53%), Gaps = 9/182 (4%) Query: 198 IVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFI 257 I L L RL+ H + L YIS +PTL+ + + Y F P L + Sbjct: 44 IALLLLVIRLTEH---RVATRLVAAYISYHR--NVPTLIQLMMWY---FAIPTLLPESVQ 95 Query: 258 GG-STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316 G + + EF+ AL AA+ +E +RSGL A+P GQ EAA ALG+++ +A R V+L Sbjct: 96 GWINAFNAEFLFSMFALGLCQAAYFSEDIRSGLRAIPDGQNEAARALGMSYMRAMREVIL 155 Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376 PQ +R+ +P L + + L KN+SLA+ +G A+L V I NQT E +I YL+ Sbjct: 156 PQGIRNALPALINHTVLLFKNTSLAMVIGVAELTYVTRDIENQTFHTFEAYVIGTLGYLA 215 Query: 377 LS 378 S Sbjct: 216 FS 217 >gi|304395667|ref|ZP_07377550.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea sp. aB] gi|304356961|gb|EFM21325.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea sp. aB] Length = 225 Score = 89.7 bits (221), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 44/127 (34%), Positives = 79/127 (62%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 +S +A S + AA+ +EI+R+G+I++ RGQ AA+ALG+T +A +L++LPQA R+++ Sbjct: 96 RLISAMVAFSLFEAAYYSEIIRAGIISISRGQGNAALALGMTQWQAMKLIILPQAFRAMV 155 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 P L +Q + L +++SL + AD TI + G +E++L +Y +S+ +L Sbjct: 156 PLLLTQGIVLFQDTSLVYVLSLADFFRTASTIGERDGTQVEMVLFAGLVYFVISLSASLL 215 Query: 385 MNRLNAK 391 ++ L K Sbjct: 216 VSYLKRK 222 Score = 43.1 bits (100), Expect = 0.075, Method: Compositional matrix adjust. Identities = 23/68 (33%), Positives = 41/68 (60%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G V TF + + ++ + GTL+ RLS K ++W ++YV +FR++P ++V+ + Sbjct: 16 LLNGLVITFKITITAVVFGILWGTLLAVMRLSTFKPISWFAKIYVNLFRSVPLVMVLLWF 75 Query: 149 YKSVLSVL 156 Y V S L Sbjct: 76 YLVVPSFL 83 >gi|157368267|ref|YP_001476256.1| polar amino acid ABC transporter inner membrane subunit [Serratia proteamaculans 568] gi|157320031|gb|ABV39128.1| polar amino acid ABC transporter, inner membrane subunit [Serratia proteamaculans 568] Length = 237 Score = 89.7 bits (221), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 45/96 (46%), Positives = 66/96 (68%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 EF++ + L+ Y++AFIAE +RSG+ V GQ AA ALGLT +A R V+LPQA++ + Sbjct: 105 EFLAGFFGLTLYSSAFIAEEIRSGIRGVAGGQKYAANALGLTGWQAMRYVVLPQALKIAM 164 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 PPL QY+N++KNSSL +A+G A+L + +T Sbjct: 165 PPLLGQYMNVIKNSSLTMAIGVAELSYASRQVETET 200 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 26/74 (35%), Positives = 41/74 (55%) Query: 84 SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143 Y + + GF+ T WL+ + AT++G L+ A R S + + W+ Y +FRN P LV Sbjct: 10 EYLSWLWRGFLLTLWLSACASLAATLLGFLLTAMRDSRLRALRWLAVGYSSLFRNTPLLV 69 Query: 144 VIFFLYKSVLSVLP 157 +FF Y + +LP Sbjct: 70 QLFFWYFAAGQILP 83 >gi|238897254|ref|YP_002922931.1| polar amino acid ABC transporter inner membrane subunit [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] gi|229465009|gb|ACQ66783.1| polar amino acid ABC transporter inner membrane subunit [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] Length = 247 Score = 89.7 bits (221), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 49/133 (36%), Positives = 80/133 (60%) Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322 S EF+S I L+ Y++AFIAE R+G+ V GQ AA ALGLTH ++ + V+ PQA++ Sbjct: 113 SFEFLSGLIGLTLYSSAFIAEEFRAGIAGVGLGQKNAAQALGLTHWQSMKYVIFPQALKI 172 Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382 +PPL QY+ ++KNSSL +A+G A+L + +T + + + F+Y+ L +I Sbjct: 173 ALPPLLGQYMYIIKNSSLTMAIGVAELSYASRQVETETLRTFQAFGVATFLYILLIALIE 232 Query: 383 LFMNRLNAKIALK 395 + + ++ K Sbjct: 233 AWNTWHHQRVLRK 245 Score = 38.5 bits (88), Expect = 2.0, Method: Compositional matrix adjust. Identities = 23/76 (30%), Positives = 38/76 (50%) Query: 82 DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141 D+ Y + GF+ T +++ +I +T++G + R S K + Y +FRN P Sbjct: 14 DTKYIIWLWDGFLITLYISVCTVIFSTLLGIFLAVARESDFKAQRVMVTCYCMLFRNTPL 73 Query: 142 LVVIFFLYKSVLSVLP 157 LV +FF Y +LP Sbjct: 74 LVQLFFWYFGSGQILP 89 >gi|148975203|ref|ZP_01812127.1| putative amino acid ABC transporter, permease protein [Vibrionales bacterium SWAT-3] gi|145965127|gb|EDK30377.1| putative amino acid ABC transporter, permease protein [Vibrionales bacterium SWAT-3] Length = 253 Score = 89.7 bits (221), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 58/178 (32%), Positives = 98/178 (55%), Gaps = 23/178 (12%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 +++P+L + ++ +G+PTL+ ++L HF V IAL+ Sbjct: 96 RSIPVLVLLLWVYYGMPTLLDVSLN---HFWAGV--------------------IALTIA 132 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 +AF+AE+ R G+ A+ RGQ EAA +LGLT+ + RLV+LP A R I+PPL +Q++ +LK Sbjct: 133 ESAFMAEVFRGGIQAINRGQHEAAESLGLTYWQKMRLVILPLAFRQILPPLGNQFVYILK 192 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394 SSL +G +DL ++ +EI + YL L ++++ + L +IA+ Sbjct: 193 MSSLVSVIGLSDLTRRANELVVNEYLPLEIYTFLVLEYLVLILVVSQAVRWLEKRIAI 250 Score = 38.9 bits (89), Expect = 1.5, Method: Compositional matrix adjust. Identities = 23/70 (32%), Positives = 42/70 (60%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 ++ GF T ++ M A +G LV LS++ ++ I R+YVEV R+IP LV++ ++ Sbjct: 48 LMAGFSETIQVSLLSMFFAMALGLLVAFPALSSSPILRGINRLYVEVMRSIPVLVLLLWV 107 Query: 149 YKSVLSVLPI 158 Y + ++L + Sbjct: 108 YYGMPTLLDV 117 >gi|302542074|ref|ZP_07294416.1| glutamate permease [Streptomyces hygroscopicus ATCC 53653] gi|302459692|gb|EFL22785.1| glutamate permease [Streptomyces himastatinicus ATCC 53653] Length = 215 Score = 89.7 bits (221), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 52/135 (38%), Positives = 84/135 (62%), Gaps = 9/135 (6%) Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309 V+ Q F G S F+ +AL CYT+ F+ E VRSG+ VP GQ EAA +LG++ + Sbjct: 73 VVPQIFFPGTS----PFVLAMVALGCYTSTFVCEAVRSGINTVPLGQAEAARSLGMSFAQ 128 Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369 RL++LPQA R++IPP++S ++ L KNS++A A +L +V +++ G AI Sbjct: 129 TLRLIVLPQATRTVIPPMSSIFIALTKNSAIAGAFSNTELFNV-SKLLSDKGFAIG---- 183 Query: 370 WMFIYLSLSIMIALF 384 W+F++++L ++ F Sbjct: 184 WIFLWIALCYLVITF 198 >gi|149181553|ref|ZP_01860048.1| ABC transporter (permease) [Bacillus sp. SG-1] gi|148850803|gb|EDL64958.1| ABC transporter (permease) [Bacillus sp. SG-1] Length = 219 Score = 89.7 bits (221), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 64/206 (31%), Positives = 109/206 (52%), Gaps = 17/206 (8%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 + F++G VLSLF ++ R K K Y S F G P ++ + L Y F P Sbjct: 31 IVGFIIGTVLSLF--KIGRI---KVLKWFADAYTSIFR--GTPLILQLMLIY---FATPQ 80 Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 L F+ P F++ +A + A+I+EI+R+G+ AV +GQ EAA ALG+++R Sbjct: 81 LTGFDI-------PPFLAGMLAFGLNSGAYISEIIRAGIQAVDKGQQEAAEALGISYRPM 133 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370 + ++LPQA+++I+P L ++Y+ L K S++ +GF D++ + T A E ++ Sbjct: 134 MKDIILPQALKNILPALMNEYITLTKESAIVSTIGFLDIMRRSQIVSANTYTAFEPLIFA 193 Query: 371 MFIYLSLSIMIALFMNRLNAKIALKE 396 IY L + + L +L ++ E Sbjct: 194 GLIYYVLVMCLTLLGRQLERRLRRSE 219 >gi|110347170|ref|YP_665988.1| polar amino acid ABC transporter, inner membrane subunit [Mesorhizobium sp. BNC1] gi|110283281|gb|ABG61341.1| L-aspartate ABC transporter membrane protein / L-glutamate ABC transporter membrane protein [Chelativorans sp. BNC1] Length = 243 Score = 89.7 bits (221), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 47/129 (36%), Positives = 80/129 (62%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + + L Y +A +AE +R+G+ ++PRGQ A A+GLT + R VLLP A R I+P Sbjct: 108 FWTTVLGLGFYMSARVAEQLRAGISSLPRGQKLAGAAIGLTTPQTYRYVLLPMAFRIILP 167 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PLTS++LN +KN+S+A+ +G +L + + T Q E + +YL+++I++ + M Sbjct: 168 PLTSEFLNTIKNTSVALTIGLVELTARARAMQEFTFQIFEAFTVATVLYLTVNILVTIGM 227 Query: 386 NRLNAKIAL 394 L ++A+ Sbjct: 228 RYLEHRVAV 236 >gi|227891536|ref|ZP_04009341.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus salivarius ATCC 11741] gi|227866683|gb|EEJ74104.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus salivarius ATCC 11741] Length = 217 Score = 89.7 bits (221), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 66/218 (30%), Positives = 112/218 (51%), Gaps = 31/218 (14%) Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPT 234 +T++ + V SF++G+VL + ++ G + LPLL I F FGLP Sbjct: 22 VTLEVSVISIVLSFIIGLVLGVIRYVKIKYLSAAVGFLIDIIRNLPLLLIIFFTYFGLPE 81 Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294 L G ++P ++ AL + +A +AEIVRSG+ AVP Sbjct: 82 L-----------------------GLRMTP-MLAAVTALVVFESAMLAEIVRSGIQAVPV 117 Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354 GQME A + GLT+ +A +++PQA++ +IPPL SQ+++L+K++SLA + +L+ Sbjct: 118 GQMEGARSSGLTYVQAMWHIIMPQALQKMIPPLVSQFISLVKDTSLATIIVLPELLYHAQ 177 Query: 355 TIINQ-TGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 I +Q T + + L+ +Y + ++L RL + Sbjct: 178 IIYSQNTTYMVPMYLMIAVMYFVVCYCLSLVARRLEKR 215 >gi|225858443|ref|YP_002739953.1| ABC transporter membrane-spanning permease - glutamine transport [Streptococcus pneumoniae 70585] gi|225721638|gb|ACO17492.1| ABC transporter membrane-spanning permease - glutamine transport [Streptococcus pneumoniae 70585] Length = 225 Score = 89.7 bits (221), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 57/160 (35%), Positives = 88/160 (55%), Gaps = 11/160 (6%) Query: 243 QLHFDKPVLGQFN--FIGGSTVS------PEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294 + + + P+L QF F G +S P + + + + Y A+IAE++RSG+ ++P Sbjct: 62 EFYQNTPLLVQFVIVFYGLPLISDHIIMIPIYWTAVLCVGLYHGAYIAEVIRSGIQSIPS 121 Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354 GQMEAA++ G T+ A RL+ LPQA R I+PPLT+Q +NL+KN+S + DL+ V Sbjct: 122 GQMEAALSQGFTYISAMRLITLPQAFRIILPPLTNQIVNLIKNTSTVAIISGVDLMFVTK 181 Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALF---MNRLNAK 391 + G I L +Y +L +A F M + N K Sbjct: 182 SWSALNGNYIPAFLGAALLYFALCFPVAQFGRKMEQANKK 221 Score = 36.2 bits (82), Expect = 8.5, Method: Compositional matrix adjust. Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 5/76 (6%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151 GF+ T LA I A ++G GA S ++ + R++VE ++N P LV ++ Sbjct: 20 GFLFTLALAIGSFILAMVLGIFFGAMSTSKRPILRILARIFVEFYQNTPLLVQFVIVFYG 79 Query: 152 VLSVLP-IPDHSIVLP 166 LP I DH I++P Sbjct: 80 ----LPLISDHIIMIP 91 >gi|330937577|gb|EGH41516.1| amino acid ABC transporter permease [Pseudomonas syringae pv. pisi str. 1704B] Length = 248 Score = 89.7 bits (221), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 49/133 (36%), Positives = 79/133 (59%) Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321 ++ F+S+ + L +TAA + E VR+G+ A+P+GQ AA A+G + VLLPQA R Sbjct: 107 ITSAFLSVVVCLGLFTAARVCEQVRTGIEALPKGQESAARAMGFKLPQIYWNVLLPQAYR 166 Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 IIPPLTS++LN+ KNSS+A +G +L++ + E + IY +L++ + Sbjct: 167 IIIPPLTSEFLNVFKNSSVASLIGLMELLAQTKQTAEFSANLFEAFTLATLIYFTLNMSL 226 Query: 382 ALFMNRLNAKIAL 394 L M + K+A+ Sbjct: 227 MLLMRAIEKKVAV 239 Score = 43.5 bits (101), Expect = 0.057, Method: Compositional matrix adjust. Identities = 22/48 (45%), Positives = 32/48 (66%) Query: 110 IGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLP 157 +G+++G R N+LV+ I VYVE+FRN+P LV +F Y V +LP Sbjct: 46 LGSVLGVMRTVPNRLVSGIATVYVEIFRNVPLLVQLFIWYFLVPDLLP 93 >gi|261343546|ref|ZP_05971191.1| glutamate/aspartate ABC transporter, permease protein [Providencia rustigianii DSM 4541] gi|282568695|gb|EFB74230.1| glutamate/aspartate ABC transporter, permease protein [Providencia rustigianii DSM 4541] Length = 246 Score = 89.7 bits (221), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 43/100 (43%), Positives = 67/100 (67%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+S + L +TAA + E VR+ + ++PRGQ AA+A+GLT + R VLLP A R I+P Sbjct: 111 FISSMLCLGLFTAARMTEQVRAAIQSLPRGQKSAALAMGLTLPQTYRYVLLPNAYRVILP 170 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365 P+TS+ LNL+KNS++A +G D+ + G +++ + A E Sbjct: 171 PMTSEMLNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAWE 210 Score = 41.2 bits (95), Expect = 0.30, Method: Compositional matrix adjust. Identities = 43/153 (28%), Positives = 68/153 (44%), Gaps = 20/153 (13%) Query: 81 SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140 +++Y ++ G T L+ I A ++G+ G R N+ +A+I YVE+FRN+P Sbjct: 17 GNTTYLGWLISGLEVTVTLSICAWIIAFLVGSFFGILRTVPNRFLAFIGTAYVELFRNVP 76 Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200 +V F Y + +LP SI F M +D N + F+ S + L Sbjct: 77 LIVQFFTWYLVIPELLP---QSIGDWFKM------------ELDPNYQFFISSM---LCL 118 Query: 201 SLF-ATRLSRHFHEKTGKALPLLYISTFLIFGL 232 LF A R++ ++LP S L GL Sbjct: 119 GLFTAARMTEQVRAAI-QSLPRGQKSAALAMGL 150 >gi|83593424|ref|YP_427176.1| amino acid ABC transporter permease [Rhodospirillum rubrum ATCC 11170] gi|83576338|gb|ABC22889.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Rhodospirillum rubrum ATCC 11170] Length = 230 Score = 89.7 bits (221), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 57/182 (31%), Positives = 106/182 (58%), Gaps = 6/182 (3%) Query: 217 KALPLL-YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE---FMSLYIA 272 +LP+L +++T I + ++ L+ L + ++F P LGQ+ I G+ + F S + Sbjct: 49 SSLPVLPHLATLYINLMRSMPLVLLIFWVYFMVPYLGQW--ILGTDRPMQVGTFTSSLLT 106 Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 + + AA+ AEI+RSG+ +V RGQ AA ALGLT+ ++ V+LPQA R+++P L +Q + Sbjct: 107 FTLFEAAYFAEIMRSGIQSVSRGQTAAAQALGLTYFQSMGHVVLPQAFRAMLPVLLTQVI 166 Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 L +++SL + D + + + G+ +E+ L +Y ++S +L + R+ A+ Sbjct: 167 VLFQDTSLVYVLSITDFLGAASKVAQRDGRLVEMYLFAAVVYFAISFAASLLVKRIQART 226 Query: 393 AL 394 A+ Sbjct: 227 AI 228 >gi|292487614|ref|YP_003530486.1| putative glutamate/aspartate ABC transporter inner membrane protein [Erwinia amylovora CFBP1430] gi|292898853|ref|YP_003538222.1| glutamate/aspartate ABC transporter permease [Erwinia amylovora ATCC 49946] gi|291198701|emb|CBJ45810.1| glutamate/aspartate ABC transporter, permease protein [Erwinia amylovora ATCC 49946] gi|291553033|emb|CBA20078.1| putative glutamate/aspartate ABC transport system, inner membrane component [Erwinia amylovora CFBP1430] gi|312171721|emb|CBX79979.1| putative glutamate/aspartate ABC transport system, inner membrane component [Erwinia amylovora ATCC BAA-2158] Length = 245 Score = 89.7 bits (221), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 48/138 (34%), Positives = 79/138 (57%), Gaps = 3/138 (2%) Query: 260 STVSPE---FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316 S + P F + L +TAA + E VR+ + ++P GQ A +A+GLT + R VLL Sbjct: 102 SEIDPNIQFFTCSVLCLGLFTAARVCEQVRAAIQSLPSGQKNAGLAMGLTLPQTYRYVLL 161 Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376 P A R I+PP+TS+ LNL+KNS++A +G D+ + G +++ + A E Y++ Sbjct: 162 PNAYRVIVPPMTSEMLNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAYESFTAITLAYVA 221 Query: 377 LSIMIALFMNRLNAKIAL 394 ++ +I L M + K+ L Sbjct: 222 INAVIMLLMGLVERKVRL 239 Score = 37.4 bits (85), Expect = 4.1, Method: Compositional matrix adjust. Identities = 24/77 (31%), Positives = 38/77 (49%) Query: 81 SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140 ++SY + GF T ++ I A +G+ G R +L + + YVE+FRN+P Sbjct: 17 GNTSYLGWLWSGFQVTIAVSVCAWIIALCVGSFFGILRTVPGRLFSSLGTCYVELFRNVP 76 Query: 141 PLVVIFFLYKSVLSVLP 157 +V F Y V +LP Sbjct: 77 LIVQFFIWYLVVPELLP 93 >gi|255023362|ref|ZP_05295348.1| glutamine ABC transporter, permease/substrate-binding protein [Listeria monocytogenes FSL J1-208] Length = 255 Score = 89.7 bits (221), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 57/176 (32%), Positives = 95/176 (53%), Gaps = 23/176 (13%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 + PL+ + F FG+P AL +++ P F++ IALS Sbjct: 100 RGTPLIVQAFFFYFGIPA----ALDFRM-------------------PVFLAGVIALSLN 136 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 A++ EIVR G+ +V +GQMEAA +LGL H+KA V+LPQA+R +IP +Q++ LK Sbjct: 137 AGAYMVEIVRGGIQSVDKGQMEAARSLGLPHKKAMMKVVLPQAIRMMIPSFINQFVITLK 196 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 ++S+ A+G +L G I+ +T ++ LI +YL + ++ +RL ++ Sbjct: 197 DTSIMSAIGLVELTQSGKIIMARTFESTWTWLIIGIMYLIVITILTKISDRLERRL 252 Score = 39.7 bits (91), Expect = 0.91, Method: Compositional matrix adjust. Identities = 25/62 (40%), Positives = 35/62 (56%) Query: 88 AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147 A+L G T LA +I A IIG G ++S +K++ I VYV++FR P +V FF Sbjct: 51 ALLSGLWLTIRLAVVSLIIAFIIGITFGFMKVSNSKILRGIATVYVDIFRGTPLIVQAFF 110 Query: 148 LY 149 Y Sbjct: 111 FY 112 >gi|148988974|ref|ZP_01820374.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP6-BS73] gi|182683539|ref|YP_001835286.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae CGSP14] gi|303253933|ref|ZP_07340054.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae BS455] gi|147925471|gb|EDK76548.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP6-BS73] gi|182628873|gb|ACB89821.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae CGSP14] gi|301801477|emb|CBW34169.1| putative amino acid ABC transporter, permease protein [Streptococcus pneumoniae INV200] gi|302599109|gb|EFL66134.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae BS455] Length = 225 Score = 89.7 bits (221), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 50/131 (38%), Positives = 76/131 (58%), Gaps = 3/131 (2%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P + + + + Y A+IAE++RSG+ ++P GQMEAA++ G T+ A RL+ LPQA R I Sbjct: 91 PIYWTAVLCVGLYHGAYIAEVIRSGIQSIPSGQMEAALSQGFTYISAMRLITLPQAFRII 150 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 +PPLT+Q +NL+KN+S + DL+ V + G I L +Y +L +A Sbjct: 151 LPPLTNQIVNLIKNTSTVAIISGVDLMFVTKSWSALNGNYIPAFLGAALLYFALCFPVAQ 210 Query: 384 F---MNRLNAK 391 F M + N K Sbjct: 211 FGRKMEQANKK 221 Score = 36.2 bits (82), Expect = 8.9, Method: Compositional matrix adjust. Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 5/76 (6%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151 GF+ T LA I A ++G GA S ++ + R++VE ++N P LV ++ Sbjct: 20 GFLFTLALAIGSFILAMVLGIFFGAMSTSKRPILRILARIFVEFYQNTPLLVQFVIVFYG 79 Query: 152 VLSVLP-IPDHSIVLP 166 LP I DH I++P Sbjct: 80 ----LPLISDHIIMIP 91 >gi|83589975|ref|YP_429984.1| amino acid ABC transporter permease [Moorella thermoacetica ATCC 39073] gi|83572889|gb|ABC19441.1| amino acid ABC transporter membrane protein, PAAT family [Moorella thermoacetica ATCC 39073] Length = 237 Score = 89.7 bits (221), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 65/216 (30%), Positives = 113/216 (52%), Gaps = 17/216 (7%) Query: 188 KIFVFSFVLGIVLSLFAT--RLSRH--------FHEKTGKALPLLYISTFLIFGLPTLVL 237 KI + + LG +L L A RLSR + + PLL + +G P L+ Sbjct: 20 KITLVAVSLGCILGLVAGMGRLSRRRLTSFLATCYVDFFRGTPLLVQIFIVYYGFPQLLD 79 Query: 238 IALKYQL-HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296 K+ + P L Q I P F++ +A S + A++AEI R+G+ ++ RGQ Sbjct: 80 EGQKFLMASLGMPQLLQTTHI------PVFVAATLATSLNSGAYVAEIFRAGIQSIERGQ 133 Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356 +EAA +LG+T + R ++LPQA + +IPPL ++++ +LK++SL +G+ +L G I Sbjct: 134 VEAARSLGMTEGQTMRYIVLPQAFKRVIPPLGNEFIAMLKDTSLLSVIGYVELTRQGQLI 193 Query: 357 INQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 T + ++I IYL ++ I+ ++ L ++ Sbjct: 194 SGATFKPLQIYFGVALIYLIMTFTISRLVDYLERRL 229 Score = 45.1 bits (105), Expect = 0.021, Method: Compositional matrix adjust. Identities = 30/103 (29%), Positives = 47/103 (45%), Gaps = 9/103 (8%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L+G V T + + I+G + G GRLS +L +++ YV+ FR P LV IF + Sbjct: 11 LLLGAVQTLKITLVAVSLGCILGLVAGMGRLSRRRLTSFLATCYVDFFRGTPLLVQIFIV 70 Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV 191 Y +L ++ GM P L T+ +FV Sbjct: 71 YYGFPQLLDEGQKFLMASLGM---------PQLLQTTHIPVFV 104 >gi|284048020|ref|YP_003398359.1| polar amino acid ABC transporter, inner membrane subunit [Acidaminococcus fermentans DSM 20731] gi|283952241|gb|ADB47044.1| polar amino acid ABC transporter, inner membrane subunit [Acidaminococcus fermentans DSM 20731] Length = 218 Score = 89.7 bits (221), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 70/222 (31%), Positives = 113/222 (50%), Gaps = 17/222 (7%) Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235 L+ +T++ A +G+V+SL R + + L +Y+ TFL G P L Sbjct: 14 LAGAGITVEITAASVGLGLAIGVVVSLI-----RLCGIRALRVLGDIYV-TFL-RGTPLL 66 Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295 V I L Y F P L +++ A S + A++AEI R G+ ++ +G Sbjct: 67 VQIFLVY---FALPALIHHRV-------DAYVAAISACSINSGAYVAEIFRGGIESIDKG 116 Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355 QMEA +LG+T + R ++LPQA + IIPPL ++++ +LK+SSL +GF +L G Sbjct: 117 QMEAGRSLGMTWWQTMRHIILPQAFKRIIPPLGNEFIAMLKDSSLVSVIGFEELTRRGQL 176 Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 II +T + EI L IYL ++ +A + L + E+ Sbjct: 177 IIARTYASFEIWLSVAIIYLVMTFAVARLVGVLERRYKKDEQ 218 >gi|307323416|ref|ZP_07602626.1| polar amino acid ABC transporter, inner membrane subunit [Streptomyces violaceusniger Tu 4113] gi|306890905|gb|EFN21881.1| polar amino acid ABC transporter, inner membrane subunit [Streptomyces violaceusniger Tu 4113] Length = 261 Score = 89.7 bits (221), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 70/215 (32%), Positives = 116/215 (53%), Gaps = 36/215 (16%) Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVL-------IALKY 242 F F VLG+VL+L RLS + L + YI F G+P L++ + L + Sbjct: 69 FGFGLVLGVVLALM--RLS---QVPPYRWLAVAYIEFFR--GVPALLVFIALGFGVPLAF 121 Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302 Q+ D+ V ++ +AL AA+IAE +R+G+ AVP+GQMEAA + Sbjct: 122 QVALDRHV-----------------TVMLALGLVGAAYIAETMRAGIQAVPKGQMEAARS 164 Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA----DLVSVGGTIIN 358 LG++H +A +++PQA R ++PPLT++ + L K+SSL +G + +L G +N Sbjct: 165 LGMSHSRAMASIIVPQAFRIVLPPLTNELVLLTKDSSLVYLLGLSLDQYELSKFGRDALN 224 Query: 359 QTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393 Q +++ IL+ YL +++ + + RL A+ A Sbjct: 225 QH-RSLTPILVAGVCYLIITVPLGQLVRRLEARSA 258 >gi|256375908|ref|YP_003099568.1| polar amino acid ABC transporter, inner membrane subunit [Actinosynnema mirum DSM 43827] gi|255920211|gb|ACU35722.1| polar amino acid ABC transporter, inner membrane subunit [Actinosynnema mirum DSM 43827] Length = 283 Score = 89.7 bits (221), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 58/170 (34%), Positives = 94/170 (55%), Gaps = 5/170 (2%) Query: 227 FLIFGLPTLVLIALKYQLH--FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284 +L GLP L+ I L + L FD + + + + F++ + L +A++AEI Sbjct: 110 WLFRGLPVLLQILLWFNLALVFDTISIPMVLEVRTNMLITAFVAALLGLGLNESAYMAEI 169 Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344 VR+GL +V GQ+EAA A+G+T R V+LPQAMR IIPP + ++N+LK +S+A + Sbjct: 170 VRAGLNSVDHGQVEAAKAIGMTPATTLRRVVLPQAMRVIIPPTGNNFINMLKGTSMASVI 229 Query: 345 GFADLVSVGGTIINQTGQAIEIIL---IWMFIYLSLSIMIALFMNRLNAK 391 GF +L+ I + Q +E +L W + +S + + F+ R K Sbjct: 230 GFLELIHAANNIASHNLQIMETLLAAAAWYMVVVSAASVGQHFLERAYGK 279 >gi|241663975|ref|YP_002982335.1| polar amino acid ABC transporter inner membrane subunit [Ralstonia pickettii 12D] gi|240866002|gb|ACS63663.1| polar amino acid ABC transporter, inner membrane subunit [Ralstonia pickettii 12D] Length = 222 Score = 89.7 bits (221), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 45/129 (34%), Positives = 82/129 (63%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P F+ + L Y+ A+++EIVR + +V RGQMEAA ++G++ ++ R ++LPQA+ + Sbjct: 87 PAFVCGVLGLGVYSGAYVSEIVRGAIQSVDRGQMEAARSIGMSSAQSMRAIILPQAVVRM 146 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 IPPL ++++ L+KNS+L + DL+ G II+ + +++E+ L +YL L+ + Sbjct: 147 IPPLGNEFIALIKNSALVSLLTIHDLMHEGQKIISVSYRSLEVYLAIALVYLVLTSAASY 206 Query: 384 FMNRLNAKI 392 ++RL I Sbjct: 207 LLHRLERNI 215 >gi|310766982|gb|ADP11932.1| Glutamate/aspartate transport system permease [Erwinia sp. Ejp617] Length = 245 Score = 89.7 bits (221), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 49/138 (35%), Positives = 79/138 (57%), Gaps = 3/138 (2%) Query: 260 STVSPE---FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316 S + P F I L +TAA + E VR+ + ++P GQ A +A+GLT + R VLL Sbjct: 102 SEIDPNIQFFTCSVICLGLFTAARVCEQVRAAIQSLPGGQKNAGLAMGLTLPQTYRYVLL 161 Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376 P A R I+PP+TS+ LNL+KNS++A +G D+ + G +++ + A E Y++ Sbjct: 162 PNAYRVIVPPMTSEMLNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAYESFSAITLAYVA 221 Query: 377 LSIMIALFMNRLNAKIAL 394 ++ +I L M + K+ L Sbjct: 222 INAVIMLLMGLVERKVRL 239 Score = 37.0 bits (84), Expect = 4.9, Method: Compositional matrix adjust. Identities = 23/77 (29%), Positives = 39/77 (50%) Query: 81 SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140 +++Y + GF T ++ I A +G+ G R +L++ + YVE+FRN+P Sbjct: 17 GNTTYLGWLWSGFQVTIAVSVCAWIIALCVGSFFGILRTVPGRLLSSLGTCYVELFRNVP 76 Query: 141 PLVVIFFLYKSVLSVLP 157 +V F Y V +LP Sbjct: 77 LIVQFFIWYLVVPELLP 93 >gi|317153463|ref|YP_004121511.1| polar amino acid ABC transporter inner membrane subunit [Desulfovibrio aespoeensis Aspo-2] gi|316943714|gb|ADU62765.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio aespoeensis Aspo-2] Length = 295 Score = 89.7 bits (221), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 44/140 (31%), Positives = 83/140 (59%) Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315 F G P F+S + L+ + A+IAEIVR+G+ +V RGQ EAA ALG++ +A R ++ Sbjct: 156 FFGRMDRFPRFLSAVVTLALFEGAYIAEIVRAGIRSVERGQWEAATALGMSRTRAMRHII 215 Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375 +PQA++ ++P L Q+++++K+S++ + +L G I+ T + EI + +Y Sbjct: 216 MPQALQRMLPALAGQFISIIKDSAIVSVISIEELTFQGQQIMTTTYRGFEIWTTVLAMYF 275 Query: 376 SLSIMIALFMNRLNAKIALK 395 L+ +L + +L ++ + Sbjct: 276 VLTFACSLAVRKLEVALSRQ 295 Score = 37.0 bits (84), Expect = 5.8, Method: Compositional matrix adjust. Identities = 21/58 (36%), Positives = 29/58 (50%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 G + T L+ + AT++G VG R S + YV + RN PPLV+IF Y Sbjct: 68 GLITTLRLSLWAGVLATVVGMAVGLMRTSPRLFNRQLSTTYVGLIRNTPPLVLIFVFY 125 >gi|188534470|ref|YP_001908267.1| Glutamate/aspartate transport system permease [Erwinia tasmaniensis Et1/99] gi|188029512|emb|CAO97389.1| Glutamate/aspartate transport system permease [Erwinia tasmaniensis Et1/99] Length = 245 Score = 89.7 bits (221), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 48/138 (34%), Positives = 79/138 (57%), Gaps = 3/138 (2%) Query: 260 STVSPE---FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316 S + P F + L +TAA + E VR+ + ++P GQ A +A+GLT + R VLL Sbjct: 102 SEIDPNIQFFTCSVLCLGLFTAARVCEQVRAAIQSLPSGQKNAGLAMGLTLPQTYRYVLL 161 Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376 P A R I+PP+TS+ LNL+KNS++A +G D+ + G +++ + A E Y++ Sbjct: 162 PNAYRVIVPPMTSEMLNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAYESFTAITLAYIA 221 Query: 377 LSIMIALFMNRLNAKIAL 394 ++ +I L M + K+ L Sbjct: 222 INAVIMLLMGLVERKVRL 239 Score = 38.5 bits (88), Expect = 1.9, Method: Compositional matrix adjust. Identities = 37/141 (26%), Positives = 62/141 (43%), Gaps = 20/141 (14%) Query: 81 SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140 +++Y + GF T ++ + A +G+L G R +L++ + YVE+FRN+P Sbjct: 17 GNTTYLGWLWSGFQVTIAVSVCAWVIALCVGSLFGILRTVPGRLLSSLGACYVELFRNVP 76 Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200 +V F Y V +LP N G+ F + +D N + F S + L Sbjct: 77 LIVQFFIWYLVVPELLP--------------ENIGMWFKS-EIDPNIQFFTCSV---LCL 118 Query: 201 SLF-ATRLSRHFHEKTGKALP 220 LF A R+ ++LP Sbjct: 119 GLFTAARVCEQVRAAI-QSLP 138 >gi|83718860|ref|YP_441774.1| glutamate/aspartate ABC transporter permease [Burkholderia thailandensis E264] gi|167580592|ref|ZP_02373466.1| glutamate/aspartate ABC transporter, permease protein [Burkholderia thailandensis TXDOH] gi|167618699|ref|ZP_02387330.1| glutamate/aspartate ABC transporter, permease protein [Burkholderia thailandensis Bt4] gi|257137942|ref|ZP_05586204.1| glutamate/aspartate ABC transporter, permease protein [Burkholderia thailandensis E264] gi|83652685|gb|ABC36748.1| glutamate/aspartate ABC transporter, permease protein [Burkholderia thailandensis E264] Length = 225 Score = 89.7 bits (221), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 43/108 (39%), Positives = 70/108 (64%) Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320 T+ S +A S + AA+ +EI+R+G+ AVPRGQ+ AA ALG+ + +A RLV+LPQA Sbjct: 92 TIDIRLASAMVAFSLFEAAYYSEIIRAGIQAVPRGQVNAAFALGMNYAQAMRLVILPQAF 151 Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368 R+++P L +Q + L +++SL + AD I ++ G ++E+IL Sbjct: 152 RAMVPLLLTQAIVLFQDTSLVYVISLADFFRTAANIGDRDGTSVEMIL 199 Score = 37.7 bits (86), Expect = 3.1, Method: Compositional matrix adjust. Identities = 20/58 (34%), Positives = 34/58 (58%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 G + TF + ++ + GTL+ RLS K +AW + YV VFR+IP ++V+ + + Sbjct: 19 GAIVTFKITLLAIVVGIVWGTLLALMRLSGVKPLAWFAQGYVTVFRSIPLVMVLLWFF 76 >gi|322833890|ref|YP_004213917.1| polar amino acid ABC transporter inner membrane subunit [Rahnella sp. Y9602] gi|321169091|gb|ADW74790.1| polar amino acid ABC transporter, inner membrane subunit [Rahnella sp. Y9602] Length = 246 Score = 89.7 bits (221), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 49/138 (35%), Positives = 82/138 (59%), Gaps = 3/138 (2%) Query: 260 STVSPE---FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316 S ++P+ F S I L +TAA + E VR+ + ++P GQ A +A+GLT + R VLL Sbjct: 102 SELAPDVQFFTSSVICLGLFTAARVCEQVRAAIQSLPSGQRNAGLAMGLTLPQTYRYVLL 161 Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376 P A R I+PP+TS+ +NL+KNS++A +G D+ + G +++ + A E Y+ Sbjct: 162 PNAYRVIVPPMTSEMVNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAYESFTAITVAYVL 221 Query: 377 LSIMIALFMNRLNAKIAL 394 ++ +I L M+ + K+ L Sbjct: 222 INAVIMLLMHFVERKVRL 239 Score = 43.9 bits (102), Expect = 0.040, Method: Compositional matrix adjust. Identities = 28/77 (36%), Positives = 42/77 (54%) Query: 81 SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140 +++Y I GF T L+ I A +IG+L G R N++++ I YVE+FRN+P Sbjct: 17 GNTTYLGWIWNGFQVTVALSICAWIIAFLIGSLFGILRTVPNRILSGIGTCYVELFRNVP 76 Query: 141 PLVVIFFLYKSVLSVLP 157 +V F Y V +LP Sbjct: 77 LIVQFFIWYLVVPELLP 93 >gi|302521884|ref|ZP_07274226.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Streptomyces sp. SPB78] gi|302430779|gb|EFL02595.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Streptomyces sp. SPB78] Length = 322 Score = 89.7 bits (221), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 46/117 (39%), Positives = 74/117 (63%), Gaps = 3/117 (2%) Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 AA++AEI R+GL+AV GQ EAA ALG++H KA R +++PQAMR I+PP ++ +N+LK Sbjct: 177 AAYMAEICRAGLLAVDEGQTEAAHALGMSHAKALRRIVIPQAMRVIVPPTGNEVINMLKT 236 Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILI---WMFIYLSLSIMIALFMNRLNAK 391 +SL AV + +L+ I +G +E++ + W I S+ + ++ R A+ Sbjct: 237 TSLVAAVQYPELLRAAQDIGQVSGAPVEMLFLAAAWYLILTSVLSIGQFYIERYYAR 293 >gi|251790178|ref|YP_003004899.1| polar amino acid ABC transporter inner membrane subunit [Dickeya zeae Ech1591] gi|247538799|gb|ACT07420.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya zeae Ech1591] Length = 231 Score = 89.7 bits (221), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 67/182 (36%), Positives = 97/182 (53%), Gaps = 9/182 (4%) Query: 198 IVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFI 257 I L L RL+ H + L YIS +PTL+ + + Y F P L + Sbjct: 38 IALLLLVIRLTEH---RVATRLVAAYISYHR--NVPTLIQLMMWY---FAIPTLLPESVQ 89 Query: 258 GG-STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316 G + + EF+ AL AA+ +E +RSGL A+P GQ EAA ALG+++ +A R V+L Sbjct: 90 GWINAFNAEFLFSMFALGLCQAAYFSEDIRSGLRAIPDGQNEAARALGMSYMRAMREVIL 149 Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376 PQ +R+ +P L + + L KN+SLA+ +G A+L V I NQT E +I YL+ Sbjct: 150 PQGIRNALPALINHTVLLFKNTSLAMVIGVAELTYVTRDIENQTFHTFEAYVIGTLGYLA 209 Query: 377 LS 378 S Sbjct: 210 FS 211 >gi|260888233|ref|ZP_05899496.1| glutamine ABC transporter, permease protein [Selenomonas sputigena ATCC 35185] gi|330838428|ref|YP_004413008.1| polar amino acid ABC transporter, inner membrane subunit [Selenomonas sputigena ATCC 35185] gi|260862067|gb|EEX76567.1| glutamine ABC transporter, permease protein [Selenomonas sputigena ATCC 35185] gi|329746192|gb|AEB99548.1| polar amino acid ABC transporter, inner membrane subunit [Selenomonas sputigena ATCC 35185] Length = 221 Score = 89.7 bits (221), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 59/167 (35%), Positives = 94/167 (56%), Gaps = 10/167 (5%) Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290 G P LV I L Y F PV I G V P F ++ A S + A++AEI RSG+ Sbjct: 64 GTPLLVQIFLIY---FALPV------ISGQRVDPFFAAI-TACSINSGAYVAEIFRSGIQ 113 Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 ++ +GQMEA +LG+T + ++LPQA++ +IP + ++++ LLK+SSL +GF +L Sbjct: 114 SIDKGQMEAGRSLGMTWLQTMWHIILPQAVKRVIPQIGNEFIALLKDSSLVSVIGFEELT 173 Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 G II +T ++EI IYL +++ I+ + L + +K Sbjct: 174 RSGQLIIARTYGSLEIWPCVAIIYLVMTLSISQLVAYLERRFRTDDK 220 >gi|262366403|gb|ACY62960.1| glutamate/aspartate transport system permease [Yersinia pestis D182038] Length = 182 Score = 89.7 bits (221), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 44/127 (34%), Positives = 78/127 (61%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 +S +A S + AA+ +EI+R+G+ ++ RGQ AA+ALG+T ++ RLV+LPQA R+++ Sbjct: 54 RLISAMVAFSLFEAAYYSEIIRAGIQSISRGQSSAALALGMTQGQSMRLVILPQAFRAMV 113 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 P L +Q + L +++SL + AD TI + G +E++L +Y +SI ++ Sbjct: 114 PLLLTQGIVLFQDTSLVYVLSLADFFRTATTIGERDGTQVEMVLFAGLVYFVISISASML 173 Query: 385 MNRLNAK 391 +N L + Sbjct: 174 VNYLKKR 180 >gi|167031321|ref|YP_001666552.1| polar amino acid ABC transporter inner membrane subunit [Pseudomonas putida GB-1] gi|166857809|gb|ABY96216.1| polar amino acid ABC transporter, inner membrane subunit [Pseudomonas putida GB-1] Length = 229 Score = 89.7 bits (221), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 69/206 (33%), Positives = 112/206 (54%), Gaps = 17/206 (8%) Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239 TLT++ A V +L I L + R SRH++ + A+P YI F G P LV + Sbjct: 18 TLTLELVAIAVVAGLILAIPLGI--ARSSRHWYVR---AVPFSYI--FFFRGTPLLVQLF 70 Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295 L Y L QF+ + S++ P F + ++ +TAA+IAEI+R L ++P+G Sbjct: 71 LVYY------GLAQFDAVRSSSLWPYLRDPFWCTVLTMTLHTAAYIAEILRGALQSIPKG 124 Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355 ++EAA ALG++ KA ++LP+A R +P +++ + +LK S+LA V +L + T Sbjct: 125 EIEAARALGMSRGKALFYIMLPRAARIGLPAYSNEVILMLKASALASTVTLLELTGMART 184 Query: 356 IINQTGQAIEIILIWMFIYLSLSIMI 381 II +T +EI YL +S ++ Sbjct: 185 IIARTYLPVEIFFAAGVFYLVISFLL 210 >gi|289434115|ref|YP_003463987.1| glutamine ABC transporter, permease/substrate-binding protein [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|289170359|emb|CBH26899.1| glutamine ABC transporter, permease/substrate-binding protein [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|313634164|gb|EFS00821.1| glutamine ABC transporter, permease/substrate-binding protein [Listeria seeligeri FSL N1-067] gi|313638787|gb|EFS03871.1| glutamine ABC transporter, permease/substrate-binding protein [Listeria seeligeri FSL S4-171] Length = 480 Score = 89.7 bits (221), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 57/176 (32%), Positives = 95/176 (53%), Gaps = 23/176 (13%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 + PL+ + F FG+P AL +++ P F++ IALS Sbjct: 325 RGTPLIVQAFFFYFGIPA----ALDFRM-------------------PVFLAGVIALSLN 361 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 A++ EIVR G+ +V +GQMEAA +LGL H+KA V+LPQA+R +IP +Q++ LK Sbjct: 362 AGAYMVEIVRGGIQSVDKGQMEAARSLGLPHKKAMLKVVLPQAIRMMIPSFINQFVITLK 421 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 ++S+ A+G +L G I+ +T ++ LI +YL + ++ +RL ++ Sbjct: 422 DTSIMSAIGLVELTQSGKIIMARTFESTWTWLIIGIMYLIVITILTKVSDRLERRL 477 Score = 39.7 bits (91), Expect = 0.82, Method: Compositional matrix adjust. Identities = 25/62 (40%), Positives = 35/62 (56%) Query: 88 AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147 A+L G T LA +I A IIG G ++S +K++ I VYV++FR P +V FF Sbjct: 276 ALLDGMWLTIKLAVVSLIIAFIIGITFGFMKVSNSKILRGIATVYVDIFRGTPLIVQAFF 335 Query: 148 LY 149 Y Sbjct: 336 FY 337 >gi|53720530|ref|YP_109516.1| glutamate/aspartate transport system permease [Burkholderia pseudomallei K96243] gi|53725718|ref|YP_103984.1| glutamate/aspartate ABC transporter permease [Burkholderia mallei ATCC 23344] gi|67643522|ref|ZP_00442267.1| glutamate/aspartate transport system permease protein GltK [Burkholderia mallei GB8 horse 4] gi|76810556|ref|YP_334803.1| glutamate/aspartate ABC transporter permease [Burkholderia pseudomallei 1710b] gi|121601568|ref|YP_991699.1| glutamate/aspartate ABC transporter, permease protein GltK [Burkholderia mallei SAVP1] gi|124383835|ref|YP_001027194.1| glutamate/aspartate ABC transporter, permease protein GltK [Burkholderia mallei NCTC 10229] gi|126440693|ref|YP_001060405.1| glutamate/aspartate ABC transporter, permease protein GltK [Burkholderia pseudomallei 668] gi|126448697|ref|YP_001082146.1| glutamate/aspartate ABC transporter, permease protein GltK [Burkholderia mallei NCTC 10247] gi|126452941|ref|YP_001067666.1| glutamate/aspartate ABC transporter, permease protein GltK [Burkholderia pseudomallei 1106a] gi|134280384|ref|ZP_01767095.1| glutamate/aspartate ABC transporter, permease protein GltK [Burkholderia pseudomallei 305] gi|166998511|ref|ZP_02264369.1| glutamate/aspartate ABC transporter, permease protein GltK [Burkholderia mallei PRL-20] gi|167721207|ref|ZP_02404443.1| glutamate/aspartate ABC transporter, permease protein GltK [Burkholderia pseudomallei DM98] gi|167740179|ref|ZP_02412953.1| glutamate/aspartate ABC transporter, permease protein GltK [Burkholderia pseudomallei 14] gi|167817394|ref|ZP_02449074.1| glutamate/aspartate ABC transporter, permease protein GltK [Burkholderia pseudomallei 91] gi|167825800|ref|ZP_02457271.1| glutamate/aspartate ABC transporter, permease protein GltK [Burkholderia pseudomallei 9] gi|167847284|ref|ZP_02472792.1| glutamate/aspartate ABC transporter, permease protein GltK [Burkholderia pseudomallei B7210] gi|167895872|ref|ZP_02483274.1| glutamate/aspartate ABC transporter, permease protein GltK [Burkholderia pseudomallei 7894] gi|167904260|ref|ZP_02491465.1| glutamate/aspartate ABC transporter, permease protein GltK [Burkholderia pseudomallei NCTC 13177] gi|167912521|ref|ZP_02499612.1| glutamate/aspartate ABC transporter, permease protein GltK [Burkholderia pseudomallei 112] gi|167920472|ref|ZP_02507563.1| glutamate/aspartate ABC transporter, permease protein GltK [Burkholderia pseudomallei BCC215] gi|217420836|ref|ZP_03452341.1| glutamate/aspartate ABC transporter, permease protein GltK [Burkholderia pseudomallei 576] gi|226196806|ref|ZP_03792385.1| glutamate/aspartate ABC transporter, permease protein GltK [Burkholderia pseudomallei Pakistan 9] gi|237813796|ref|YP_002898247.1| glutamate/aspartate ABC transporter, permease protein GltK [Burkholderia pseudomallei MSHR346] gi|242317860|ref|ZP_04816876.1| glutamate/aspartate ABC transporter, permease protein GltK [Burkholderia pseudomallei 1106b] gi|254178792|ref|ZP_04885446.1| glutamate/aspartate ABC transporter, permease protein GltK [Burkholderia mallei ATCC 10399] gi|254180663|ref|ZP_04887261.1| glutamate/aspartate ABC transporter, permease protein GltK [Burkholderia pseudomallei 1655] gi|254190904|ref|ZP_04897410.1| glutamate/aspartate ABC transporter, permease protein GltK [Burkholderia pseudomallei Pasteur 52237] gi|254199132|ref|ZP_04905547.1| glutamate/aspartate ABC transporter, permease protein GltK [Burkholderia pseudomallei S13] gi|254202699|ref|ZP_04909062.1| glutamate/aspartate ABC transporter, permease protein GltK [Burkholderia mallei FMH] gi|254208039|ref|ZP_04914389.1| glutamate/aspartate ABC transporter, permease protein GltK [Burkholderia mallei JHU] gi|254261455|ref|ZP_04952509.1| glutamate/aspartate ABC transporter, permease protein GltK [Burkholderia pseudomallei 1710a] gi|254299252|ref|ZP_04966702.1| glutamate/aspartate ABC transporter, permease protein GltK [Burkholderia pseudomallei 406e] gi|52210944|emb|CAH36932.1| glutamate/aspartate transport system permease protein [Burkholderia pseudomallei K96243] gi|52429141|gb|AAU49734.1| glutamate/aspartate ABC transporter, permease protein [Burkholderia mallei ATCC 23344] gi|76580009|gb|ABA49484.1| glutamate/aspartate ABC transporter, permease protein [Burkholderia pseudomallei 1710b] gi|121230378|gb|ABM52896.1| glutamate/aspartate ABC transporter, permease protein GltK [Burkholderia mallei SAVP1] gi|124291855|gb|ABN01124.1| glutamate/aspartate ABC transporter, permease protein GltK [Burkholderia mallei NCTC 10229] gi|126220186|gb|ABN83692.1| glutamate/aspartate ABC transporter, permease protein GltK [Burkholderia pseudomallei 668] gi|126226583|gb|ABN90123.1| glutamate/aspartate ABC transporter, permease protein GltK [Burkholderia pseudomallei 1106a] gi|126241567|gb|ABO04660.1| glutamate/aspartate ABC transporter, permease protein GltK [Burkholderia mallei NCTC 10247] gi|134248391|gb|EBA48474.1| glutamate/aspartate ABC transporter, permease protein GltK [Burkholderia pseudomallei 305] gi|147746946|gb|EDK54023.1| glutamate/aspartate ABC transporter, permease protein GltK [Burkholderia mallei FMH] gi|147751933|gb|EDK59000.1| glutamate/aspartate ABC transporter, permease protein GltK [Burkholderia mallei JHU] gi|157809233|gb|EDO86403.1| glutamate/aspartate ABC transporter, permease protein GltK [Burkholderia pseudomallei 406e] gi|157938578|gb|EDO94248.1| glutamate/aspartate ABC transporter, permease protein GltK [Burkholderia pseudomallei Pasteur 52237] gi|160694706|gb|EDP84714.1| glutamate/aspartate ABC transporter, permease protein GltK [Burkholderia mallei ATCC 10399] gi|169656962|gb|EDS88359.1| glutamate/aspartate ABC transporter, permease protein GltK [Burkholderia pseudomallei S13] gi|184211202|gb|EDU08245.1| glutamate/aspartate ABC transporter, permease protein GltK [Burkholderia pseudomallei 1655] gi|217396248|gb|EEC36265.1| glutamate/aspartate ABC transporter, permease protein GltK [Burkholderia pseudomallei 576] gi|225931066|gb|EEH27074.1| glutamate/aspartate ABC transporter, permease protein GltK [Burkholderia pseudomallei Pakistan 9] gi|237504945|gb|ACQ97263.1| glutamate/aspartate ABC transporter, permease protein GltK [Burkholderia pseudomallei MSHR346] gi|238524885|gb|EEP88315.1| glutamate/aspartate transport system permease protein GltK [Burkholderia mallei GB8 horse 4] gi|242141099|gb|EES27501.1| glutamate/aspartate ABC transporter, permease protein GltK [Burkholderia pseudomallei 1106b] gi|243065196|gb|EES47382.1| glutamate/aspartate ABC transporter, permease protein GltK [Burkholderia mallei PRL-20] gi|254220144|gb|EET09528.1| glutamate/aspartate ABC transporter, permease protein GltK [Burkholderia pseudomallei 1710a] Length = 225 Score = 89.7 bits (221), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 43/108 (39%), Positives = 70/108 (64%) Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320 T+ S +A S + AA+ +EI+R+G+ AVPRGQ+ AA ALG+ + +A RLV+LPQA Sbjct: 92 TIDIRLASAMVAFSLFEAAYYSEIIRAGIQAVPRGQVNAAFALGMNYAQAMRLVILPQAF 151 Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368 R+++P L +Q + L +++SL + AD I ++ G ++E+IL Sbjct: 152 RAMVPLLLTQAIVLFQDTSLVYVISLADFFRTAANIGDRDGTSVEMIL 199 Score = 38.1 bits (87), Expect = 2.5, Method: Compositional matrix adjust. Identities = 21/58 (36%), Positives = 34/58 (58%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 G V TF + ++ + GTL+ RLS K +AW + YV VFR+IP ++V+ + + Sbjct: 19 GAVVTFKITLLAIVIGIVWGTLLALMRLSGVKPLAWFAQGYVTVFRSIPLVMVLLWFF 76 >gi|311031433|ref|ZP_07709523.1| amino acid ABC transporter ATP-binding protein [Bacillus sp. m3-13] Length = 220 Score = 89.7 bits (221), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 49/132 (37%), Positives = 80/132 (60%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F S+ +AL+ + A+IAEI R + ++ +GQMEA +LG+T A R ++LPQA R +P Sbjct: 89 FWSVTLALAFHNGAYIAEIFRGTIQSIDKGQMEAGRSLGMTRNLAMRRIILPQAFRRALP 148 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PL +Q++ LK+SSLA +GF +L +V T + + +L+ YL L +I +F+ Sbjct: 149 PLGNQFIICLKDSSLAAFIGFYELFNVAQTQGANSFDYMTYLLVVSVYYLFLVGLIGIFV 208 Query: 386 NRLNAKIALKEK 397 N L K + ++ Sbjct: 209 NLLERKFSASDR 220 >gi|332041199|gb|EGI77564.1| amino acid ABC transporter [Hylemonella gracilis ATCC 19624] Length = 250 Score = 89.7 bits (221), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 55/158 (34%), Positives = 91/158 (57%), Gaps = 7/158 (4%) Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291 +PTLV ++ L P+ +F G+ F S +ALS A+I+EI R+G+ + Sbjct: 92 MPTLV--HSEHGLLLTGPLASEFRQNYGA-----FFSGAVALSLNAGAYISEIFRAGIQS 144 Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 + +GQ +AA +LG TH ++ R V++PQA R ++PPL ++ + LLK+SSL A+G ADL Sbjct: 145 IHQGQTQAAYSLGFTHAQSMRYVVVPQAARRMVPPLVNEAIMLLKDSSLVSAIGLADLAL 204 Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 T+ + E L +YL ++++++L RL Sbjct: 205 AARTVAGAYSRYWEPYLAISALYLVMTLLLSLAAKRLE 242 >gi|312864860|ref|ZP_07725091.1| putative glutamine ABC transporter, permease protein GlnM [Streptococcus downei F0415] gi|311099987|gb|EFQ58200.1| putative glutamine ABC transporter, permease protein GlnM [Streptococcus downei F0415] Length = 235 Score = 89.7 bits (221), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 61/184 (33%), Positives = 100/184 (54%), Gaps = 20/184 (10%) Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226 FG F +G F TL M A + + LG++ ++ SR+ K KA+ +Y+ Sbjct: 24 FGQFA--KGF-FYTLGMAVCA--LIVALALGLIFGAMSS--SRN---KLAKAIARVYVEV 73 Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286 F P LV HF G G+ P F + + + YT A+++E++R Sbjct: 74 FQ--NTPLLV--------HFVFVFYGLSILTNGAIKVPAFWTSVLCVGVYTGAYMSEVIR 123 Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346 SG+ ++PRGQ EAA++ G T+R+ +++LPQA+R IIPP+ +Q +NL+KN+S + Sbjct: 124 SGIESIPRGQTEAALSQGFTYRETMSIIILPQAVRIIIPPMINQVVNLIKNTSTVAIISG 183 Query: 347 ADLV 350 AD++ Sbjct: 184 ADIM 187 Score = 43.1 bits (100), Expect = 0.069, Method: Compositional matrix adjust. Identities = 29/65 (44%), Positives = 37/65 (56%), Gaps = 1/65 (1%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151 GF T +A +I A +G + GA S NKL I RVYVEVF+N P LV F++ Sbjct: 30 GFFYTLGMAVCALIVALALGLIFGAMSSSRNKLAKAIARVYVEVFQNTPLLVHFVFVFYG 89 Query: 152 VLSVL 156 LS+L Sbjct: 90 -LSIL 93 >gi|239928984|ref|ZP_04685937.1| permease [Streptomyces ghanaensis ATCC 14672] gi|291437323|ref|ZP_06576713.1| arginine/ornithine transport permease [Streptomyces ghanaensis ATCC 14672] gi|291340218|gb|EFE67174.1| arginine/ornithine transport permease [Streptomyces ghanaensis ATCC 14672] Length = 312 Score = 89.7 bits (221), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 73/244 (29%), Positives = 124/244 (50%), Gaps = 20/244 (8%) Query: 158 IPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGK 217 IPD+ F ++R LS T+ V GI+L++ RLS++ Sbjct: 60 IPDY--------FFDDRILSGVGKTLLLTVLAMAIGIVGGILLAVM--RLSKN---PVTS 106 Query: 218 ALPLLYISTFLIFGLPTLVLIALKYQLH--FDKPVLGQFNFIGGSTVSPEFMSLYIALSC 275 ++ YI F G P LV + + + L F+ LG F S F++ + L Sbjct: 107 SIAWFYIWFFR--GTPVLVQLIVWFNLGLVFEYINLGPFYKDEWSDFMTPFLTALLGLGL 164 Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335 AA++AEI R+GL++V GQ EA+ ALG++H K R +++PQAMR I+PP ++ +N+L Sbjct: 165 NEAAYMAEICRAGLLSVDEGQTEASHALGMSHAKTLRRIVVPQAMRVIVPPTGNEVINML 224 Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL---FMNRLNAKI 392 K +SL V + +L+ I +G E++ + YL L+ + ++ ++ R AK Sbjct: 225 KTTSLVSVVQYPELLRAAQDIGQTSGAPAEMLFLAAAWYLLLTSVFSVGQYYLERYYAKG 284 Query: 393 ALKE 396 + ++ Sbjct: 285 STRQ 288 >gi|210623568|ref|ZP_03293894.1| hypothetical protein CLOHIR_01844 [Clostridium hiranonis DSM 13275] gi|210153438|gb|EEA84444.1| hypothetical protein CLOHIR_01844 [Clostridium hiranonis DSM 13275] Length = 223 Score = 89.7 bits (221), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 62/202 (30%), Positives = 118/202 (58%), Gaps = 11/202 (5%) Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251 F F++G++L L ++S++ KAL +YI +I P LV +++ +++ P + Sbjct: 30 FGFIIGLILCL--AKMSKN---GIFKALSTIYIE--VIRDTPLLVQLSI---IYYGLPQI 79 Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311 G NF + +F++ ALS + A++AEI+RSG+ +V +GQMEA+ +LGL++ Sbjct: 80 G-INFPSLFGIPSDFIAGAFALSINSGAYVAEIMRSGIQSVDKGQMEASRSLGLSYWATM 138 Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371 R V++PQA+++I+P L +++++L+K S++ +G D++ T+ N T + L Sbjct: 139 RHVIVPQAVKNILPSLANEFVSLVKESAILSFIGVIDIMFTANTVKNATYDSFGPYLFAA 198 Query: 372 FIYLSLSIMIALFMNRLNAKIA 393 IY L+ ++ + L K+A Sbjct: 199 AIYFVLTFTLSKLVGLLEKKMA 220 >gi|218532219|ref|YP_002423035.1| polar amino acid ABC transporter inner membrane subunit [Methylobacterium chloromethanicum CM4] gi|218524522|gb|ACK85107.1| polar amino acid ABC transporter, inner membrane subunit [Methylobacterium chloromethanicum CM4] Length = 230 Score = 89.7 bits (221), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 50/165 (30%), Positives = 93/165 (56%), Gaps = 3/165 (1%) Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGST--VSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291 +L L+ + + +F P LG + IG T F S + + + AA+ +EIVR+G+ + Sbjct: 67 SLPLVLVIFWFYFLVPYLGAWA-IGADTPIQVGAFASALVTFTLFEAAYFSEIVRAGIQS 125 Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 +P+GQ AA ALG+++ + RLV+LPQA R+++P L +Q + L +++SL + D + Sbjct: 126 IPKGQSAAARALGMSYAQVMRLVVLPQAFRNMVPLLLTQTIVLFQDTSLVYVLSLTDFLG 185 Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 + + G+ +E+ L +Y ++ +L + RL A+ A+ Sbjct: 186 AASKVAQRDGRLVEMYLFAALVYFAVCFAASLLVRRLQARTAIAR 230 >gi|187929866|ref|YP_001900353.1| polar amino acid ABC transporter inner membrane subunit [Ralstonia pickettii 12J] gi|187726756|gb|ACD27921.1| polar amino acid ABC transporter, inner membrane subunit [Ralstonia pickettii 12J] Length = 222 Score = 89.7 bits (221), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 45/129 (34%), Positives = 82/129 (63%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P F+ + L Y+ A+++EIVR + +V RGQMEAA ++G++ ++ R ++LPQA+ + Sbjct: 87 PAFVCGVLGLGVYSGAYVSEIVRGAIQSVDRGQMEAARSIGMSSAQSMRAIILPQAVVRM 146 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 IPPL ++++ L+KNS+L + DL+ G II+ + +++E+ L +YL L+ + Sbjct: 147 IPPLGNEFIALIKNSALVSLLTIHDLMHEGQKIISVSYRSLEVYLAIALVYLVLTSAASY 206 Query: 384 FMNRLNAKI 392 ++RL I Sbjct: 207 LLHRLERNI 215 >gi|260575379|ref|ZP_05843378.1| polar amino acid ABC transporter, inner membrane subunit [Rhodobacter sp. SW2] gi|259022299|gb|EEW25596.1| polar amino acid ABC transporter, inner membrane subunit [Rhodobacter sp. SW2] Length = 259 Score = 89.7 bits (221), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 63/204 (30%), Positives = 113/204 (55%), Gaps = 15/204 (7%) Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247 +I + V+ +V++L T + R + +G+ L Y+ +I P +V I++ Y Sbjct: 54 RIAALAGVIALVIALI-TAILRLSNSISGRWLARAYVE--VIRNTPLIVQISMFY--FAI 108 Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307 P+LG F G +AL+ + AAF++EI+R+G++ V Q EAA +LGLT Sbjct: 109 APLLGIERFWAG----------VLALALFEAAFLSEIIRAGILGVALTQWEAAASLGLTR 158 Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367 + RL++LPQA+R+++PPLTS + L+ +SS+ + A+L + G I + EI Sbjct: 159 PQTYRLIVLPQALRAMLPPLTSSAVALVMDSSIVSVIALAELTTAGRNAIADNFLSFEIW 218 Query: 368 LIWMFIYLSLSIMIALFMNRLNAK 391 + +YL++++ ++ F RL + Sbjct: 219 FLVAGLYLTITLTLSAFARRLERR 242 >gi|222150112|ref|YP_002551069.1| ABC transporter membrane spanning protein (amino acid) [Agrobacterium vitis S4] gi|221737094|gb|ACM38057.1| ABC transporter membrane spanning protein (amino acid) [Agrobacterium vitis S4] Length = 274 Score = 89.7 bits (221), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 47/127 (37%), Positives = 81/127 (63%) Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 AL +AFIAEI R+G+ ++ +GQ+EAA +LGL + RLV+LPQA+R I PPL++ + Sbjct: 146 ALCIGYSAFIAEIFRAGIESIDKGQIEAAKSLGLNRTQRFRLVILPQAIRVIFPPLSNDF 205 Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 + ++K+SSL +G AD+ G + + + E I +IYL L+I ++L + R+ + Sbjct: 206 VAMVKDSSLVSVLGVADISQAGKIYASGSFRFFETYSIVAYIYLILTIGLSLILRRVEKR 265 Query: 392 IALKEKK 398 + ++ + Sbjct: 266 MRSRDGQ 272 >gi|262041260|ref|ZP_06014471.1| glutamate/aspartate ABC superfamily ATP binding cassette transporter, permease protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|330005985|ref|ZP_08305451.1| glutamate/aspartate transport system permease protein GltK [Klebsiella sp. MS 92-3] gi|259041376|gb|EEW42436.1| glutamate/aspartate ABC superfamily ATP binding cassette transporter, permease protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|328536022|gb|EGF62430.1| glutamate/aspartate transport system permease protein GltK [Klebsiella sp. MS 92-3] Length = 224 Score = 89.4 bits (220), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 45/127 (35%), Positives = 79/127 (62%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 +S +A S + AA+ +EI+R+G+ ++ RGQ AA+ALG+TH ++ RLV+LPQA R+++ Sbjct: 96 RLISAMVAFSMFEAAYYSEIIRAGIQSISRGQSSAALALGMTHWQSMRLVILPQAFRAMV 155 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 P L +Q + L +++SL + AD TI + G +E+IL +Y +S+ +L Sbjct: 156 PLLLTQGIVLFQDTSLVYVLSLADFFRTASTIGERDGTQVEMILFAGGVYFVISLSASLL 215 Query: 385 MNRLNAK 391 ++ L + Sbjct: 216 VSWLKKR 222 Score = 39.3 bits (90), Expect = 0.99, Method: Compositional matrix adjust. Identities = 29/92 (31%), Positives = 48/92 (52%), Gaps = 10/92 (10%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G V T + ++ + GTL+ RLS+ +AW + YV VFR+IP ++V+ + Sbjct: 16 LLAGLVITLKITVIAIVVGIVWGTLLAVMRLSSFLPLAWFAKSYVNVFRSIPLVMVLLWF 75 Query: 149 Y-------KSVLSVLPIPD---HSIVLPFGMF 170 Y ++VL + P D S ++ F MF Sbjct: 76 YLIVPGFLQNVLGLSPKTDIRLISAMVAFSMF 107 >gi|226941143|ref|YP_002796217.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Laribacter hongkongensis HLHK9] gi|226716070|gb|ACO75208.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Laribacter hongkongensis HLHK9] Length = 247 Score = 89.4 bits (220), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 46/117 (39%), Positives = 78/117 (66%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F S +AL+ A+I EI R+G++++ +GQMEAA +LG+++ +A R V++PQA R ++P Sbjct: 116 FFSGLLALTLNAGAYITEIFRAGILSIDKGQMEAARSLGMSYGQAMRFVVVPQAFRRMLP 175 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382 PL ++ + LLK+SSL A+G A+L T+ + E L F+YL+L++++A Sbjct: 176 PLGNEAIMLLKDSSLVSAIGLAELAFAARTVAGVYSRYWEPYLTISFMYLALTMLMA 232 >gi|152969250|ref|YP_001334359.1| glutamate/aspartate ABC transporter membrane protein [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238893714|ref|YP_002918448.1| glutamate/aspartate transport system permease component [Klebsiella pneumoniae NTUH-K2044] gi|150954099|gb|ABR76129.1| glutamate/aspartate transport protein (ABC superfamily, membrane) [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238546030|dbj|BAH62381.1| glutamate/aspartate transport system permease component [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] Length = 224 Score = 89.4 bits (220), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 45/127 (35%), Positives = 79/127 (62%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 +S +A S + AA+ +EI+R+G+ ++ RGQ AA+ALG+TH ++ RLV+LPQA R+++ Sbjct: 96 RLISAMVAFSMFEAAYYSEIIRAGIQSISRGQSSAALALGMTHWQSMRLVILPQAFRAMV 155 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 P L +Q + L +++SL + AD TI + G +E+IL +Y +S+ +L Sbjct: 156 PLLLTQGIVLFQDTSLVYVLSLADFFRTASTIGERDGTQVEMILFAGGVYFVISLSASLL 215 Query: 385 MNRLNAK 391 ++ L + Sbjct: 216 VSWLKKR 222 Score = 40.0 bits (92), Expect = 0.67, Method: Compositional matrix adjust. Identities = 29/92 (31%), Positives = 48/92 (52%), Gaps = 10/92 (10%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G V T + ++ + GTL+ RLS+ +AW + YV VFR+IP ++V+ + Sbjct: 16 LLAGLVITLKITVIAIVVGIVWGTLLAVMRLSSFMPLAWFAKSYVNVFRSIPLVMVLLWF 75 Query: 149 Y-------KSVLSVLPIPD---HSIVLPFGMF 170 Y ++VL + P D S ++ F MF Sbjct: 76 YLIVPGFLQNVLGLSPKTDIRLISAMVAFSMF 107 >gi|167837858|ref|ZP_02464741.1| glutamate/aspartate ABC transporter, permease protein GltK [Burkholderia thailandensis MSMB43] Length = 225 Score = 89.4 bits (220), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 43/108 (39%), Positives = 70/108 (64%) Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320 T+ S +A S + AA+ +EI+R+G+ AVPRGQ+ AA ALG+ + +A RLV+LPQA Sbjct: 92 TIDIRLASAMVAFSLFEAAYYSEIIRAGIQAVPRGQVNAAFALGMNYAQAMRLVILPQAF 151 Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368 R+++P L +Q + L +++SL + AD I ++ G ++E+IL Sbjct: 152 RAMVPLLLTQAIVLFQDTSLVYVISLADFFRTAANIGDRDGTSVEMIL 199 Score = 38.1 bits (87), Expect = 2.8, Method: Compositional matrix adjust. Identities = 23/65 (35%), Positives = 37/65 (56%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151 G + TF + ++ + GTL+ RLS K +AW + YV VFR+IP ++V+ + + Sbjct: 19 GAIITFKITLLAIVIGIVWGTLLALMRLSGVKPLAWFAQGYVTVFRSIPLVMVLLWFFLI 78 Query: 152 VLSVL 156 V VL Sbjct: 79 VPQVL 83 >gi|283853410|ref|ZP_06370656.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio sp. FW1012B] gi|283571223|gb|EFC19237.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio sp. FW1012B] Length = 269 Score = 89.4 bits (220), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 64/206 (31%), Positives = 114/206 (55%), Gaps = 27/206 (13%) Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF--LIFGLPTLVLIALKYQLHFDKPV 250 + V G+V L R+SR+ H L ST+ ++ G+P LV QL + Sbjct: 83 ALVFGLVTGL--GRISRNKHIN-------LIASTYVEIVRGVPLLV------QLFYIYYA 127 Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 LG+F + P+ ++ +++S A++ E+ R+G+IA+P GQ EAA +LG + Sbjct: 128 LGRFVHV------PDLLAAVLSMSVCYGAYMGEVFRAGIIAIPVGQTEAARSLGFNRAQT 181 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE----I 366 V+LPQA R+I+PP+ ++++ LLK++SL +G ADL+ G +++ Q E + Sbjct: 182 MYHVILPQAWRTILPPVGNEFIALLKDTSLVSILGVADLLRRGREYASESFQYFETFTMV 241 Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKI 392 +I++ I L LS ++++ RL+ + Sbjct: 242 AVIYLIITLILSKLVSIMEERLSHHV 267 Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust. Identities = 23/69 (33%), Positives = 39/69 (56%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151 G + TF + + A + G + G GR+S NK + I YVE+ R +P LV +F++Y + Sbjct: 68 GILVTFQVTVCSIALALVFGLVTGLGRISRNKHINLIASTYVEIVRGVPLLVQLFYIYYA 127 Query: 152 VLSVLPIPD 160 + + +PD Sbjct: 128 LGRFVHVPD 136 >gi|237785697|ref|YP_002906402.1| glutamate ABC transporter permease [Corynebacterium kroppenstedtii DSM 44385] gi|237758609|gb|ACR17859.1| glutamate ABC transport system, permease protein [Corynebacterium kroppenstedtii DSM 44385] Length = 312 Score = 89.4 bits (220), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 48/122 (39%), Positives = 74/122 (60%), Gaps = 8/122 (6%) Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291 +P L+L+ YQL + V F ++ L+ Y A IAE++RSG+ A Sbjct: 116 IPVLILMIFAYQLFAEYAVFPSEQL--------AFAAVVFGLTLYNGAVIAEVLRSGIEA 167 Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 +P GQ EAA+ALGLTHR+ R++LLPQA+ S++P L +Q + LK+S+L +G+ ++V Sbjct: 168 LPSGQSEAALALGLTHRQTMRIILLPQAVASMLPALIAQMVIALKDSALGYQIGYVEVVR 227 Query: 352 VG 353 G Sbjct: 228 SG 229 Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 33/99 (33%), Positives = 49/99 (49%), Gaps = 3/99 (3%) Query: 78 PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137 P+ +++ T IL G T AF +I A ++G ++G GRL +V IC V VE FR Sbjct: 55 PFIKSTTWTTYILPGLWGTLKAAFVSIILAMLLGAVLGTGRLHHRWIVRRICGVIVEFFR 114 Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIVLP---FGMFLNN 173 IP L+++ F Y+ P + FG+ L N Sbjct: 115 AIPVLILMIFAYQLFAEYAVFPSEQLAFAAVVFGLTLYN 153 >gi|319795335|ref|YP_004156975.1| polar amino acid ABC transporter, inner membrane subunit [Variovorax paradoxus EPS] gi|315597798|gb|ADU38864.1| polar amino acid ABC transporter, inner membrane subunit [Variovorax paradoxus EPS] Length = 231 Score = 89.4 bits (220), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 61/165 (36%), Positives = 89/165 (53%), Gaps = 15/165 (9%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 + +PLL F FG P L+ +K Q+ + G E S +AL+ Y Sbjct: 66 RNIPLLAHMLFWYFGAPELLPDGIK-----------QWLYAGHI----EAYSAIVALALY 110 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 TAAF+AE +RSG+ A+P Q EA ALG R V+LPQA+R +PPL SQ L+L K Sbjct: 111 TAAFMAEDIRSGIRAIPTVQFEAGRALGFGFLDTMRRVVLPQALRITVPPLISQTLSLWK 170 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 N+S+A +G A+L+ G + + T ++ E YL++S+ I Sbjct: 171 NTSIATVIGVAELMYQAGQVESATFRSFESFAFASAAYLTVSLAI 215 >gi|270291410|ref|ZP_06197632.1| ABC-type amino acid transport system, permease and periplasmic component [Pediococcus acidilactici 7_4] gi|270280256|gb|EFA26092.1| ABC-type amino acid transport system, permease and periplasmic component [Pediococcus acidilactici 7_4] Length = 495 Score = 89.4 bits (220), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 64/203 (31%), Positives = 112/203 (55%), Gaps = 25/203 (12%) Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251 F ++G +L+L RLSRH + +A+ L Y+ + G P +V + L Y Sbjct: 313 FGSIIGALLALM--RLSRH---TSLRAIALAYVE--FVRGTPLMVQLMLVY--------- 356 Query: 252 GQFNFIGGSTVS-PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 F G V+ P + IA+S +AA++AE++R G+ +V GQ+EAA +LGL ++ Sbjct: 357 ----FGLGIVVNLPALTAGMIAVSLNSAAYVAEVIRGGINSVDEGQVEAAQSLGLNYQDR 412 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370 R V+LPQA+++I P L +++++L+K SS+ +G DL+ + + T + + IL+ Sbjct: 413 LRFVVLPQALKNIWPALGNEFISLIKESSIVSIIGVTDLIYQLKIVQSDTYRGVAPILVA 472 Query: 371 MFIY----LSLSIMIALFMNRLN 389 M +Y SLS ++ + + N Sbjct: 473 MVLYFVLTFSLSRLLKFYEGKFN 495 >gi|182436031|ref|YP_001823750.1| putative arginine/ornithine ABC transporter permease protein [Streptomyces griseus subsp. griseus NBRC 13350] gi|326776655|ref|ZP_08235920.1| polar amino acid ABC transporter, inner membrane subunit [Streptomyces cf. griseus XylebKG-1] gi|178464547|dbj|BAG19067.1| putative arginine/ornithine ABC transporter permease protein [Streptomyces griseus subsp. griseus NBRC 13350] gi|326656988|gb|EGE41834.1| polar amino acid ABC transporter, inner membrane subunit [Streptomyces cf. griseus XylebKG-1] Length = 322 Score = 89.4 bits (220), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 73/216 (33%), Positives = 114/216 (52%), Gaps = 14/216 (6%) Query: 189 IFVFSFVLGIVLS--LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246 I V + VLG++L L RLS++ + LYI F G P V + L + L Sbjct: 87 ISVLAMVLGVILGVVLAVMRLSKN---PVTSWVAWLYIWFFR--GTPVYVQLLLWFNLAL 141 Query: 247 DKPVLGQFNFIGG---STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 PVL FI + V FM + L+ AA++AEI R+G+ +V GQ EA+ AL Sbjct: 142 IFPVL-NIPFIYKDEMTDVMTPFMCALLGLALNEAAYMAEICRAGIQSVDEGQTEASHAL 200 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363 G+T K R V+LPQA+R IIPP ++++N+LK SSL AV + +L+ I + + Sbjct: 201 GMTQGKTMRRVVLPQALRVIIPPTGNEFINMLKTSSLVYAVTYNELLRSTSQIGSTSYAV 260 Query: 364 IEIIL---IWMFIYLSLSIMIALFMNRLNAKIALKE 396 +E++ IW + S+ + ++ R A+ +L+ Sbjct: 261 MEMLFVASIWYIVMTSVFSVGQYYLERRFARGSLRS 296 Score = 36.2 bits (82), Expect = 9.7, Method: Compositional matrix adjust. Identities = 24/95 (25%), Positives = 46/95 (48%), Gaps = 4/95 (4%) Query: 69 GFEIDQGIVPYTS--DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVA 126 G+ QG + + + D + ++ G T ++ M+ I+G ++ RLS N + + Sbjct: 55 GYAFSQGNIQWHAVGDKLFDKNVVAGAGRTLLISVLAMVLGVILGVVLAVMRLSKNPVTS 114 Query: 127 WICRVYVEVFRNIPPLV--VIFFLYKSVLSVLPIP 159 W+ +Y+ FR P V +++F + VL IP Sbjct: 115 WVAWLYIWFFRGTPVYVQLLLWFNLALIFPVLNIP 149 >gi|327441628|dbj|BAK17993.1| ABC-type amino acid transport system, permease component [Solibacillus silvestris StLB046] Length = 221 Score = 89.4 bits (220), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 67/210 (31%), Positives = 114/210 (54%), Gaps = 21/210 (10%) Query: 191 VFSFVLGIVLSLF--ATRLSRHFHEKTGKALPLLY-ISTFLIFGLPTLVLIALKYQLHFD 247 V S ++GIV+ LF ++S+ K L L+ I FL+ G P +V I + L+F Sbjct: 30 VVSILIGIVIGLFFALMKISKI------KVLELISDIYVFLVRGTPLIVQI---FILYFG 80 Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307 + G + P+F + +AL+ + A+I+EI+R + V +GQMEA +LG+T Sbjct: 81 ---------LSGLFLLPDFWAASLALALHNGAYISEILRGTIQGVDKGQMEAGRSLGMTK 131 Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367 R ++LPQA R +PPL +Q++ LK+SSLA + +L +V T+ + + + Sbjct: 132 VLTLRRIILPQAFRRALPPLGNQFIIGLKDSSLAAFISMNELFNVATTLGSNNFDEMTYL 191 Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 LI YL L ++ L +NR ++A+ ++ Sbjct: 192 LIVAIYYLVLVALLTLIVNRFEKRLAISDR 221 >gi|301299235|ref|ZP_07205522.1| ABC transporter, permease protein [Lactobacillus salivarius ACS-116-V-Col5a] gi|300215037|gb|ADJ79453.1| Glutamine transport system permease protein [Lactobacillus salivarius CECT 5713] gi|300853195|gb|EFK80792.1| ABC transporter, permease protein [Lactobacillus salivarius ACS-116-V-Col5a] Length = 217 Score = 89.4 bits (220), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 65/218 (29%), Positives = 112/218 (51%), Gaps = 31/218 (14%) Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPT 234 +T++ + V SF++G++L + ++ G + LPLL I F FGLP Sbjct: 22 VTLEVSVISIVLSFIIGLILGVIRYVKIKYLSAAVGFLIDIIRNLPLLLIIFFTYFGLPE 81 Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294 L G ++P ++ AL + +A +AEIVRSG+ AVP Sbjct: 82 L-----------------------GLRMTP-MLAAVTALVVFESAMLAEIVRSGIQAVPV 117 Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354 GQME A + GLT+ +A +++PQA++ +IPPL SQ+++L+K++SLA + +L+ Sbjct: 118 GQMEGARSSGLTYVQAMWHIIMPQALQKMIPPLVSQFISLVKDTSLATIIVLPELLYHAQ 177 Query: 355 TIINQ-TGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 I +Q T + + L+ +Y + ++L RL + Sbjct: 178 IIYSQNTTYMVPMYLMIAVMYFVVCYCLSLVARRLEKR 215 >gi|290510007|ref|ZP_06549377.1| amino acid ABC transporter, permease [Klebsiella sp. 1_1_55] gi|289776723|gb|EFD84721.1| amino acid ABC transporter, permease [Klebsiella sp. 1_1_55] Length = 250 Score = 89.4 bits (220), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 49/136 (36%), Positives = 76/136 (55%) Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321 ++PEF+ L +T+AF+ E + SGL AV GQ EAA++ G T + R +LLPQ + Sbjct: 110 LTPEFLCSMWGLGVFTSAFLVEEIASGLRAVSHGQREAALSQGFTPWQELRFILLPQGLA 169 Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 + P+ QYLNL+K SSLA +GFA+L I + A+E + +YL+L + + Sbjct: 170 NAWQPIVGQYLNLMKLSSLASGIGFAELTYQVRQIESYNAHALEAFAVGTALYLALGVAM 229 Query: 382 ALFMNRLNAKIALKEK 397 + + RL L+ Sbjct: 230 GVALTRLGPGRKLQRS 245 >gi|330830033|ref|YP_004392985.1| amino acid ABC transporter permease [Aeromonas veronii B565] gi|328805169|gb|AEB50368.1| ABC-type amino acid transporter, permease protein [Aeromonas veronii B565] Length = 301 Score = 89.4 bits (220), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 62/179 (34%), Positives = 100/179 (55%), Gaps = 15/179 (8%) Query: 228 LIFGLPTLVLIALKYQLHFDK--PVLGQFNFIGGSTVSPEFMSLY-------------IA 272 LI LP LV I + Y ++ P G ++G ++SP +L+ + Sbjct: 117 LIRNLPPLVFIFIFYFFIANQLLPASGLSRWLGTVSLSPWQEALFGPPARWENLISGTLC 176 Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 + +AAF+AEIVR+GL A+PRGQ EAA +LGL+ R V+LPQAM ++PPLT Q + Sbjct: 177 VGMISAAFVAEIVRAGLAAIPRGQWEAAQSLGLSPWVRLRHVILPQAMLLMLPPLTGQLI 236 Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 L+K++++ + +L VG + N +G EI L+ YL + + + + ++RL A+ Sbjct: 237 ALVKDTAIVSLISVQELTFVGTEMANSSGLVYEIWLLVAAAYLFICLSLFVLLSRLEAR 295 >gi|309781434|ref|ZP_07676170.1| glutamine ABC transporter, permease protein [Ralstonia sp. 5_7_47FAA] gi|308919847|gb|EFP65508.1| glutamine ABC transporter, permease protein [Ralstonia sp. 5_7_47FAA] Length = 222 Score = 89.4 bits (220), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 45/129 (34%), Positives = 82/129 (63%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P F+ + L Y+ A+++EIVR + +V RGQMEAA ++G++ ++ R ++LPQA+ + Sbjct: 87 PAFVCGVLGLGVYSGAYVSEIVRGAIQSVDRGQMEAARSIGMSSAQSMRAIILPQAVVRM 146 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 IPPL ++++ L+KNS+L + DL+ G II+ + +++E+ L +YL L+ + Sbjct: 147 IPPLGNEFIALIKNSALVSLLTIHDLMHEGQKIISVSYRSLEVYLAIALVYLVLTSAASY 206 Query: 384 FMNRLNAKI 392 ++RL I Sbjct: 207 LLHRLERNI 215 >gi|294814953|ref|ZP_06773596.1| permease [Streptomyces clavuligerus ATCC 27064] gi|294327552|gb|EFG09195.1| permease [Streptomyces clavuligerus ATCC 27064] Length = 351 Score = 89.4 bits (220), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 46/129 (35%), Positives = 79/129 (61%), Gaps = 3/129 (2%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F++ + L AA++AEI R+GL++V GQ EA+ ALG++H K R +++PQAMR I+P Sbjct: 194 FLTALLGLGLNEAAYMAEICRAGLLSVDEGQTEASHALGMSHSKTLRRIVIPQAMRVIVP 253 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL-- 383 P ++ +N+LK +SL AV F +L I +G +E+ + YL L+ ++++ Sbjct: 254 PTGNEVINMLKTTSLVAAVQFTELFRQAQNIGQTSGAPVEMFFLAAAWYLVLTSVLSVGQ 313 Query: 384 -FMNRLNAK 391 ++ R A+ Sbjct: 314 YYLERHYAR 322 >gi|19704137|ref|NP_603699.1| amino acid ABC transporter permease [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|296328658|ref|ZP_06871175.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] gi|19714347|gb|AAL94998.1| Amino acid transport system permease protein [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|296154257|gb|EFG95058.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] Length = 236 Score = 89.4 bits (220), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 48/147 (32%), Positives = 88/147 (59%) Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309 +L F+G +P + IA + A++AEI+R+G+ + +GQMEA ALGL++ + Sbjct: 90 ILANLIFVGILRETPILIIGGIAFGLNSGAYVAEIIRAGIEGLDKGQMEAGRALGLSYSQ 149 Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369 A R +++PQA+++I+P L S+++ LLK +S+ +G DL+ I +QT + +E +L Sbjct: 150 AMRKIIVPQAVKNILPALVSEFITLLKETSIIGFIGGIDLLRSANIITSQTYRGVEPLLA 209 Query: 370 WMFIYLSLSIMIALFMNRLNAKIALKE 396 IYL L+ + FM ++ + + + Sbjct: 210 VGIIYLILTSIFTAFMRKVERGLKVSD 236 >gi|304385122|ref|ZP_07367468.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Pediococcus acidilactici DSM 20284] gi|304329316|gb|EFL96536.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Pediococcus acidilactici DSM 20284] Length = 495 Score = 89.4 bits (220), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 64/203 (31%), Positives = 112/203 (55%), Gaps = 25/203 (12%) Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251 F ++G +L+L RLSRH + +A+ L Y+ + G P +V + L Y Sbjct: 313 FGSIIGALLALM--RLSRH---TSLRAIALAYVE--FVRGTPLMVQLMLVY--------- 356 Query: 252 GQFNFIGGSTVS-PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 F G V+ P + IA+S +AA++AE++R G+ +V GQ+EAA +LGL ++ Sbjct: 357 ----FGLGIVVNLPALTAGMIAVSLNSAAYVAEVIRGGINSVDEGQVEAAQSLGLNYQDR 412 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370 R V+LPQA+++I P L +++++L+K SS+ +G DL+ + + T + + IL+ Sbjct: 413 LRFVVLPQALKNIWPALGNEFISLIKESSIVSIIGVTDLIYQLKIVQSDTYRGVAPILVA 472 Query: 371 MFIY----LSLSIMIALFMNRLN 389 M +Y SLS ++ + + N Sbjct: 473 MVLYFVLTFSLSRLLKFYEGKFN 495 >gi|290510404|ref|ZP_06549774.1| glutamate Aspartate transport system permease gltK [Klebsiella sp. 1_1_55] gi|289777120|gb|EFD85118.1| glutamate Aspartate transport system permease gltK [Klebsiella sp. 1_1_55] Length = 224 Score = 89.4 bits (220), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 45/127 (35%), Positives = 79/127 (62%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 +S +A S + AA+ +EI+R+G+ ++ RGQ AA+ALG+TH ++ RLV+LPQA R+++ Sbjct: 96 RLISAMVAFSMFEAAYYSEIIRAGIQSISRGQSSAALALGMTHWQSMRLVILPQAFRAMV 155 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 P L +Q + L +++SL + AD TI + G +E+IL +Y +S+ +L Sbjct: 156 PLLLTQGIVLFQDTSLVYVLSLADFFRTASTIGERDGTQVEMILFAGGVYFVISLSASLL 215 Query: 385 MNRLNAK 391 ++ L + Sbjct: 216 VSWLKKR 222 Score = 40.0 bits (92), Expect = 0.61, Method: Compositional matrix adjust. Identities = 29/92 (31%), Positives = 48/92 (52%), Gaps = 10/92 (10%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G V T + ++ + GTL+ RLS+ +AW + YV VFR+IP ++V+ + Sbjct: 16 LLAGLVITLKITVIAIVVGIVWGTLLAVMRLSSFLPLAWFAKTYVNVFRSIPLVMVLLWF 75 Query: 149 Y-------KSVLSVLPIPD---HSIVLPFGMF 170 Y ++VL + P D S ++ F MF Sbjct: 76 YLIVPGFLQNVLGLSPKTDIRLISAMVAFSMF 107 >gi|24379263|ref|NP_721218.1| putative glutamine ABC transporter, permease protein [Streptococcus mutans UA159] gi|24377179|gb|AAN58524.1|AE014921_9 putative glutamine ABC transporter, permease protein [Streptococcus mutans UA159] Length = 728 Score = 89.4 bits (220), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 52/176 (29%), Positives = 98/176 (55%), Gaps = 17/176 (9%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 + +PL+ ++ F+ +G+P L+ +Q P+ +F+ G+ IAL+ Sbjct: 569 RGIPLMIVAAFIFWGIPNLIESITGHQ----SPI---NDFVAGT----------IALTLN 611 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 A+IAEIVR G+ AVP GQMEA+ +LG++++ + ++LPQA + ++P +Q++ LK Sbjct: 612 GGAYIAEIVRGGIEAVPSGQMEASRSLGISYKTTMKRIILPQAFKLMLPNFINQFVISLK 671 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 ++++ A+G +L G II + Q+ + I +YL + ++ RL +I Sbjct: 672 DTTIISAIGLIELFQAGKIIIARNYQSFRMYAILAIMYLVIITLLTRLAKRLEKRI 727 >gi|152968870|ref|YP_001333979.1| glutamate/aspartate ABC transporter membrane protein [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|262042355|ref|ZP_06015517.1| glutamate/aspartate ABC superfamily ATP binding cassette transporter, membrane protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|330006745|ref|ZP_08305699.1| ABC transporter, permease protein [Klebsiella sp. MS 92-3] gi|150953719|gb|ABR75749.1| glutamate/aspartate transport protein (ABC superfamily, membrane) [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|259040263|gb|EEW41372.1| glutamate/aspartate ABC superfamily ATP binding cassette transporter, membrane protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|328535746|gb|EGF62186.1| ABC transporter, permease protein [Klebsiella sp. MS 92-3] Length = 247 Score = 89.4 bits (220), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 49/136 (36%), Positives = 76/136 (55%) Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321 ++PEF+ L +T+AF+ E + SGL AV GQ EAA++ G T + R +LLPQ + Sbjct: 107 LTPEFLCSMWGLGVFTSAFLVEEIASGLRAVSHGQREAALSQGFTPWQELRFILLPQGLA 166 Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 + P+ QYLNL+K SSLA +GFA+L I + A+E + +YL+L + + Sbjct: 167 NAWQPIVGQYLNLMKLSSLASGIGFAELTYQVRQIESYNAHALEAFAVGTALYLALGVAM 226 Query: 382 ALFMNRLNAKIALKEK 397 + + RL L+ Sbjct: 227 GVALTRLGPGRKLQRS 242 >gi|27382709|ref|NP_774238.1| amino acid ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] gi|27355881|dbj|BAC52863.1| amino acid ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] Length = 230 Score = 89.4 bits (220), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 63/227 (27%), Positives = 116/227 (51%), Gaps = 10/227 (4%) Query: 178 FPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG------ 231 F L D + + F G+ ++ T L+ G A+ L+ +S F + G Sbjct: 2 FGNLDFDVIRRALPYLFYEGMTFTVTLTALAGLGGLIFGTAIALMRLSGFKVLGRIAGVY 61 Query: 232 ---LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVS-PEFMSLYIALSCYTAAFIAEIVRS 287 + +L L+ + + +F P +GQ+ +S F S I + AA+ +EI+R+ Sbjct: 62 VDFMRSLPLVLVIFWFYFLVPYIGQWVTGASRPISVGAFASSLITFIMFEAAYFSEIMRA 121 Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347 G+ ++ RGQ AA ALGLT+ + R V+LPQA R+++P L +Q + L +++SL + Sbjct: 122 GIQSISRGQPAAANALGLTYAQTMRYVVLPQAFRNMLPVLLTQTIVLFQDTSLVYVLSIP 181 Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394 D + + + G+ +E+ L +Y ++S + + + RL A+IA+ Sbjct: 182 DFLGAASKVAQRDGRLVEMYLFAAVVYFTISCVASFGVRRLQARIAI 228 >gi|300313611|ref|YP_003777703.1| amino acid ABC transporter permease [Herbaspirillum seropedicae SmR1] gi|300076396|gb|ADJ65795.1| ABC-type amino acid transport system, permease component protein [Herbaspirillum seropedicae SmR1] Length = 247 Score = 89.4 bits (220), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 48/133 (36%), Positives = 80/133 (60%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+S +ALS A+I+EI R+G+ ++ RGQ AA +LG+ + R V+LPQA R ++P Sbjct: 115 FLSGTVALSLNAGAYISEIFRAGIQSIERGQSYAAASLGMNYGLTMRYVVLPQAFRRMLP 174 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PL ++ + LLK+SSL A+G A+L T+ + E + +Y S++I +AL + Sbjct: 175 PLGNEAITLLKDSSLVSAIGLAELAYAARTVAGTYARYWEPYITISVLYFSMTICLALVV 234 Query: 386 NRLNAKIALKEKK 398 RL +K + ++ Sbjct: 235 ARLESKYSAPHRR 247 >gi|253690632|ref|YP_003019822.1| polar amino acid ABC transporter, inner membrane subunit [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251757210|gb|ACT15286.1| polar amino acid ABC transporter, inner membrane subunit [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 247 Score = 89.4 bits (220), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 72/212 (33%), Positives = 110/212 (51%), Gaps = 30/212 (14%) Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDT----------NAKIFVFSFVLGIV 199 +S+ S L P + I L G FL G+S T+ + T ++++ V S V+ Sbjct: 6 QSLESWLLAPQYLIWLWHG-FLITLGISLSTIALSTVLGFLLAAARDSQVRVLSSVVVAY 64 Query: 200 LSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGG 259 SLF + PLL F FG L + L+ + + +G Sbjct: 65 SSLF-------------RNTPLLVQLFFWYFGAGQLFPSEMMQWLNTPHVI----SLLGM 107 Query: 260 STVSP--EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317 + P EF++ L+ Y++AFIAE +R+G+ V RGQ AA ALGLT ++ R V+LP Sbjct: 108 TLAWPSFEFLAGLAGLTLYSSAFIAEEIRAGIRGVARGQKYAAHALGLTGWQSMRYVVLP 167 Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349 QA++ +PPL QY+N++KNSSL +A+G A+L Sbjct: 168 QALKIALPPLLGQYMNIVKNSSLTMAIGVAEL 199 Score = 37.0 bits (84), Expect = 5.4, Method: Compositional matrix adjust. Identities = 21/66 (31%), Positives = 37/66 (56%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151 GF+ T ++ S + +T++G L+ A R S ++++ + Y +FRN P LV +FF Y Sbjct: 24 GFLITLGISLSTIALSTVLGFLLAAARDSQVRVLSSVVVAYSSLFRNTPLLVQLFFWYFG 83 Query: 152 VLSVLP 157 + P Sbjct: 84 AGQLFP 89 >gi|269792188|ref|YP_003317092.1| polar amino acid ABC transporter, inner membrane subunit [Thermanaerovibrio acidaminovorans DSM 6589] gi|269099823|gb|ACZ18810.1| polar amino acid ABC transporter, inner membrane subunit [Thermanaerovibrio acidaminovorans DSM 6589] Length = 510 Score = 89.4 bits (220), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 55/114 (48%), Positives = 73/114 (64%), Gaps = 7/114 (6%) Query: 249 PVLGQ--FNFIG----GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302 PVL Q F F G G +SP FM+ I L AA+ AE R+GL+AVPRGQMEAA+A Sbjct: 343 PVLIQLFFIFYGLPNVGIKLSP-FMAGVIGLGMNYAAYEAENYRAGLLAVPRGQMEAALA 401 Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356 L +T +A R V++PQA R +IPP+T+ +++LLK+SSL + DL G I Sbjct: 402 LSMTRWQALRHVVVPQAFRVVIPPVTNDFISLLKDSSLVSIITMVDLTKAYGQI 455 >gi|224372627|ref|YP_002606999.1| permease of abc transporter [Nautilia profundicola AmH] gi|223589720|gb|ACM93456.1| permease of abc transporter [Nautilia profundicola AmH] Length = 318 Score = 89.4 bits (220), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 47/132 (35%), Positives = 78/132 (59%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P F + ++LS + A+IAEI+R + A+ +GQ EAA++LG T + +L++LPQA+R Sbjct: 184 PRFWAGVMSLSIFYGAYIAEILRGAIQAIDKGQHEAAMSLGFTSFQKMQLIILPQALRKA 243 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 +P L + ++L+K+SSL + DL VG I+ T E L +YL L+ +++ Sbjct: 244 LPALVGELISLIKDSSLVSIISITDLTKVGREIVANTFSPFETWLTVAALYLMLTSILSF 303 Query: 384 FMNRLNAKIALK 395 +RL K+ K Sbjct: 304 IGHRLEKKMKAK 315 >gi|254389017|ref|ZP_05004248.1| permease [Streptomyces clavuligerus ATCC 27064] gi|326443324|ref|ZP_08218058.1| permease [Streptomyces clavuligerus ATCC 27064] gi|197702735|gb|EDY48547.1| permease [Streptomyces clavuligerus ATCC 27064] Length = 313 Score = 89.4 bits (220), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 44/118 (37%), Positives = 74/118 (62%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F++ + L AA++AEI R+GL++V GQ EA+ ALG++H K R +++PQAMR I+P Sbjct: 156 FLTALLGLGLNEAAYMAEICRAGLLSVDEGQTEASHALGMSHSKTLRRIVIPQAMRVIVP 215 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 P ++ +N+LK +SL AV F +L I +G +E+ + YL L+ ++++ Sbjct: 216 PTGNEVINMLKTTSLVAAVQFTELFRQAQNIGQTSGAPVEMFFLAAAWYLVLTSVLSV 273 >gi|320184058|gb|EFW58878.1| Putative amino-acid ABC transporter permease protein yhdX [Shigella flexneri CDC 796-83] Length = 122 Score = 89.4 bits (220), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 51/115 (44%), Positives = 70/115 (60%) Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFN 255 + IVLS+ R ++ + KTG+ + LI GLP L LH+D P L FN Sbjct: 1 MAIVLSVGLFRFNKTYQIKTGQLRRTWPFAAVLIIGLPLLAQWLFGAALHWDVPALRGFN 60 Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 F GG + PE +L +ALS YT+AFIAEI+R+G+ AVP GQ EAA +LGL + ++ Sbjct: 61 FRGGMVLIPELAALTLALSVYTSAFIAEIIRAGIQAVPYGQHEAARSLGLRYARS 115 >gi|312864788|ref|ZP_07725019.1| putative arginine ABC transporter, permease protein ArtQ [Streptococcus downei F0415] gi|311099915|gb|EFQ58128.1| putative arginine ABC transporter, permease protein ArtQ [Streptococcus downei F0415] Length = 230 Score = 89.4 bits (220), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 53/144 (36%), Positives = 87/144 (60%), Gaps = 3/144 (2%) Query: 257 IGGSTVSPEFMSLY---IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313 IG TV +F L I LS + A+I+EIVR+G+ AVP+GQ+EAA +LG+ KA R Sbjct: 86 IGFGTVELDFSRLIPGIIILSLNSGAYISEIVRAGIEAVPKGQVEAAYSLGIKPAKAMRY 145 Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI 373 V+LPQA ++I+P L ++++ ++K+SSL +G +L + T++ T +E +L F Sbjct: 146 VVLPQAFKNILPALGNEFITIIKDSSLLQTIGIMELWNGAQTVLATTYVPLEPLLFAAFY 205 Query: 374 YLSLSIMIALFMNRLNAKIALKEK 397 YL L+ ++ L ++ +K Sbjct: 206 YLMLTTVLTAGQKWLENRLGKGQK 229 >gi|290580730|ref|YP_003485122.1| putative glutamine ABC transporter, permease protein [Streptococcus mutans NN2025] gi|254997629|dbj|BAH88230.1| putative glutamine ABC transporter, permease protein [Streptococcus mutans NN2025] Length = 728 Score = 89.4 bits (220), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 52/176 (29%), Positives = 98/176 (55%), Gaps = 17/176 (9%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 + +PL+ ++ F+ +G+P L+ +Q P+ +F+ G+ IAL+ Sbjct: 569 RGIPLMIVAAFIFWGIPNLIESITGHQ----SPI---NDFVAGT----------IALTLN 611 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 A+IAEIVR G+ AVP GQMEA+ +LG++++ + ++LPQA + ++P +Q++ LK Sbjct: 612 GGAYIAEIVRGGIEAVPSGQMEASRSLGISYKTTMKRIILPQAFKLMLPNFINQFVISLK 671 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 ++++ A+G +L G II + Q+ + I +YL + ++ RL +I Sbjct: 672 DTTIISAIGLIELFQAGKIIIARNYQSFRMYAILAIMYLVIITLLTRLAKRLEKRI 727 >gi|115350620|ref|YP_772459.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia ambifaria AMMD] gi|172059653|ref|YP_001807305.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia ambifaria MC40-6] gi|115280608|gb|ABI86125.1| L-glutamate ABC transporter membrane protein / L-aspartate ABC transporter membrane protein [Burkholderia ambifaria AMMD] gi|171992170|gb|ACB63089.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria MC40-6] Length = 225 Score = 89.4 bits (220), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 42/108 (38%), Positives = 68/108 (62%) Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320 T+ S +A S + AA+ +EI+R+G+ AVPRGQM AA ALG+ + A RLV+LPQA Sbjct: 92 TIDIRLASAMVAFSLFEAAYYSEIIRAGIQAVPRGQMNAAFALGMNYAHAMRLVILPQAF 151 Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368 R+++P L +Q + L +++SL + AD + ++ G +E++L Sbjct: 152 RAMVPLLLTQAIVLFQDTSLVYVISLADFFRTAANVGDRDGTTVEMVL 199 Score = 40.0 bits (92), Expect = 0.63, Method: Compositional matrix adjust. Identities = 23/65 (35%), Positives = 37/65 (56%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151 G + TF + ++ + GTL+ RLS K +AW + YV VFR+IP ++V+ + + Sbjct: 19 GAIVTFKITLIAIVVGIVWGTLLALMRLSGVKPLAWFAKAYVTVFRSIPLVMVLLWFFLI 78 Query: 152 VLSVL 156 V VL Sbjct: 79 VPQVL 83 >gi|290476189|ref|YP_003469089.1| glutamate/aspartate ABC transporter membrane protein [Xenorhabdus bovienii SS-2004] gi|289175522|emb|CBJ82325.1| glutamate/aspartate transport protein (ABC superfamily, membrane) [Xenorhabdus bovienii SS-2004] Length = 224 Score = 89.4 bits (220), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 45/127 (35%), Positives = 77/127 (60%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 +S +A S + AA+ +EI+R+G+ ++ RGQ AA+ALG+TH ++ RL++LPQA R++I Sbjct: 96 RLISAMVAFSLFEAAYYSEIIRAGIQSISRGQSSAALALGMTHMQSMRLIILPQAFRAMI 155 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 P L +Q + L +++SL + AD I + G IE+IL +Y +S ++ Sbjct: 156 PLLLTQGIVLFQDTSLVYVLSLADFFRTATNIGERDGTQIEMILFAGVVYFVISFAASML 215 Query: 385 MNRLNAK 391 +N L + Sbjct: 216 VNYLKKR 222 Score = 38.9 bits (89), Expect = 1.5, Method: Compositional matrix adjust. Identities = 19/57 (33%), Positives = 35/57 (61%), Gaps = 7/57 (12%) Query: 111 GTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY-------KSVLSVLPIPD 160 GTL+ RLS+ K+++W +YV +FR++P ++V+ + Y ++VL + P D Sbjct: 38 GTLLAMMRLSSIKILSWFATLYVNLFRSVPLVMVLLWFYLIVPNLLQNVLGISPRTD 94 >gi|258406275|ref|YP_003199017.1| polar amino acid ABC transporter, inner membrane subunit [Desulfohalobium retbaense DSM 5692] gi|257798502|gb|ACV69439.1| polar amino acid ABC transporter, inner membrane subunit [Desulfohalobium retbaense DSM 5692] Length = 234 Score = 89.4 bits (220), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 68/211 (32%), Positives = 116/211 (54%), Gaps = 26/211 (12%) Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALP-LLYISTFLIFGLPTLVLIALKY---QLHFDK 248 +F +G+V L RLS+ K LP L+YI +I G P L++I Y + F K Sbjct: 43 AFWVGLVFGLM--RLSK----KAIFRLPALVYIE--IIRGTPLLMVIFWFYFLAPIAFGK 94 Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308 P+ PE S IA +T+A++AEIVR+G+ ++P+GQMEAA GL+H Sbjct: 95 PL-------------PEAASALIAFIVFTSAYVAEIVRAGVQSLPKGQMEAARGSGLSHV 141 Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA-IEII 367 ++ + ++LPQA+R++IP +Q+++L K++SLA +G +L + N+T A EI Sbjct: 142 QSMQYIILPQALRNMIPSFVNQFVSLTKDTSLAYIIGVNELTRTATQVNNRTLIAPTEIF 201 Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 + IY + ++ +L +++ + + Sbjct: 202 ITIALIYFVVCYVLTALSRKLERQMSRYQAR 232 >gi|225854141|ref|YP_002735653.1| ABC transporter membrane-spanning permease - glutamine transport [Streptococcus pneumoniae JJA] gi|225723247|gb|ACO19100.1| ABC transporter membrane-spanning permease - glutamine transport [Streptococcus pneumoniae JJA] Length = 225 Score = 89.4 bits (220), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 73/238 (30%), Positives = 113/238 (47%), Gaps = 43/238 (18%) Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFAT----------RLSRHFHEKTG 216 FG F N G F TL + + F+ + VLGI +T R+ F++ T Sbjct: 14 FGQFFN--GFLF-TLALAIGS--FILAMVLGIFFGAMSTSKRPILRILARIFVEFYQNT- 67 Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 PLL + +GLP + D ++ P + + + + Y Sbjct: 68 ---PLLVQFVIVFYGLPLIS----------DHTIM-----------IPIYWTAVLCVGLY 103 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 A+IAE++RSG+ ++P GQMEAA++ G T+ A RL++LPQ R I+PPLT+Q +NL+K Sbjct: 104 HGAYIAEVIRSGIQSIPSGQMEAALSQGFTYISAMRLIILPQTFRIILPPLTNQIVNLIK 163 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF---MNRLNAK 391 N+S + DL+ V + G I L +Y +L +A F M + N K Sbjct: 164 NTSTVAIISGVDLMFVTKSWSALNGNYIPAFLGAALLYFALCFPVAQFGRKMEQANKK 221 Score = 38.1 bits (87), Expect = 2.6, Method: Compositional matrix adjust. Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 5/76 (6%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151 GF+ T LA I A ++G GA S ++ + R++VE ++N P LV ++ Sbjct: 20 GFLFTLALAIGSFILAMVLGIFFGAMSTSKRPILRILARIFVEFYQNTPLLVQFVIVFYG 79 Query: 152 VLSVLP-IPDHSIVLP 166 LP I DH+I++P Sbjct: 80 ----LPLISDHTIMIP 91 >gi|161504173|ref|YP_001571285.1| hypothetical protein SARI_02280 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160865520|gb|ABX22143.1| hypothetical protein SARI_02280 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 224 Score = 89.4 bits (220), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 44/127 (34%), Positives = 79/127 (62%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 +S +A S + AA+ +EI+R+G+ ++ RGQ AA+ALG+TH ++ RL++LPQA R+++ Sbjct: 96 RLISAMVAFSMFEAAYYSEIIRAGIQSISRGQSSAALALGMTHWQSMRLIILPQAFRAMV 155 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 P L +Q + L +++SL + AD TI + G +E+IL +Y +S+ +L Sbjct: 156 PLLLTQGIVLFQDTSLVYVLSLADFFRTASTIGERDGTQVEMILFAGAVYFVISLSASLL 215 Query: 385 MNRLNAK 391 ++ L + Sbjct: 216 VSYLKKR 222 Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust. Identities = 28/92 (30%), Positives = 49/92 (53%), Gaps = 10/92 (10%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G V T + + ++ + GT++ RLS+ +AW + YV VFR+IP ++V+ + Sbjct: 16 LLAGLVITLKITVTAVVVGIVWGTILAVMRLSSFTPIAWFAKAYVNVFRSIPLVMVLLWF 75 Query: 149 Y-------KSVLSVLPIPD---HSIVLPFGMF 170 Y ++VL + P D S ++ F MF Sbjct: 76 YLIVPGFLQNVLGLSPKTDIRLISAMVAFSMF 107 >gi|330898558|gb|EGH29977.1| amino acid ABC transporter permease [Pseudomonas syringae pv. japonica str. M301072PT] gi|330981581|gb|EGH79684.1| amino acid ABC transporter permease [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 248 Score = 89.4 bits (220), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 49/129 (37%), Positives = 77/129 (59%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+S+ + L +TAA + E VR+G+ A+P+GQ AA A+G + VLLPQA R IIP Sbjct: 111 FLSVVVCLGLFTAARVCEQVRTGIEALPKGQESAARAMGFKLPQIYWNVLLPQAYRIIIP 170 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PLTS++LN+ KNSS+A +G +L++ + E + IY +L++ + L M Sbjct: 171 PLTSEFLNVFKNSSVASLIGLMELLAQTKQTAEFSANLFEAFTLATLIYFTLNMSLMLLM 230 Query: 386 NRLNAKIAL 394 + K+A+ Sbjct: 231 RAIEKKVAV 239 Score = 43.5 bits (101), Expect = 0.058, Method: Compositional matrix adjust. Identities = 22/48 (45%), Positives = 32/48 (66%) Query: 110 IGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLP 157 +G+++G R N+LV+ I VYVE+FRN+P LV +F Y V +LP Sbjct: 46 LGSVLGVMRTVPNRLVSGIATVYVEIFRNVPLLVQLFIWYFLVPDLLP 93 >gi|329940763|ref|ZP_08290043.1| binding-protein-dependent transporter subunit [Streptomyces griseoaurantiacus M045] gi|329300057|gb|EGG43955.1| binding-protein-dependent transporter subunit [Streptomyces griseoaurantiacus M045] Length = 279 Score = 89.4 bits (220), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 71/215 (33%), Positives = 111/215 (51%), Gaps = 25/215 (11%) Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL---VLIALKYQLHF 246 FV VLG+V++L + +G +YI F GLP L + + + L F Sbjct: 83 FVVGLVLGMVIALMRLSSVGPYRWVSG-----IYIEIFR--GLPALLIFIFVGVAVPLAF 135 Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306 I G T + + IAL +AA++AE +R+G+ AVP+GQMEAA +LG + Sbjct: 136 PG------TEIPGGT----YGKVAIALGLVSAAYMAETIRAGIQAVPKGQMEAARSLGFS 185 Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA----DLVSVGGTIINQTGQ 362 H +A V++PQA R +IPPLT++ + L K+SSL + +G +L G + +QT Sbjct: 186 HARAMISVVIPQAFRIVIPPLTNELVLLFKDSSLVLFLGVTLEERELAKFGRDLASQTAN 245 Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 + IL+ YL +++ + + RL AK K Sbjct: 246 STP-ILVAGLCYLLVTVPLGFIVRRLEAKAGEATK 279 Score = 37.7 bits (86), Expect = 3.4, Method: Compositional matrix adjust. Identities = 19/69 (27%), Positives = 35/69 (50%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 I + NT SG + ++G ++ RLS+ W+ +Y+E+FR +P L++ F+ Sbjct: 68 ITLALKNTVLYTLSGFVVGLVLGMVIALMRLSSVGPYRWVSGIYIEIFRGLPALLIFIFV 127 Query: 149 YKSVLSVLP 157 +V P Sbjct: 128 GVAVPLAFP 136 >gi|34762442|ref|ZP_00143442.1| Amino acid transport system permease protein [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gi|27887910|gb|EAA24978.1| Amino acid transport system permease protein [Fusobacterium nucleatum subsp. vincentii ATCC 49256] Length = 236 Score = 89.4 bits (220), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 47/147 (31%), Positives = 87/147 (59%) Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309 +L F+G +P + IA + A++AEI+R+G+ + +GQMEA ALGL++ + Sbjct: 90 ILANLIFVGALRETPILVIGGIAFGLNSGAYVAEIIRAGIEGLDKGQMEAGRALGLSYSQ 149 Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369 R +++PQA+++I+P L S+++ LLK +S+ +G DL+ I +QT + +E +L Sbjct: 150 TMRKIIVPQAVKNILPALVSEFITLLKETSIIGFIGGIDLLRSASIITSQTYRGVEPLLA 209 Query: 370 WMFIYLSLSIMIALFMNRLNAKIALKE 396 IYL L+ + FM ++ + + + Sbjct: 210 VGIIYLILTSIFTAFMRKVERGLKVSD 236 >gi|291544793|emb|CBL17902.1| amino acid ABC transporter membrane protein, PAAT family (TC 3.A.1.3.-) [Ruminococcus sp. 18P13] Length = 233 Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 67/232 (28%), Positives = 121/232 (52%), Gaps = 18/232 (7%) Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF-- 227 FL + + T + T + F+ +LG+VL F + R H+K GK L + + Sbjct: 15 FLKDDRWKYLTDGLSTTLIVTFFAVILGMVLG-FLIAIVRATHDKNGKLGVLNFFAKVYL 73 Query: 228 -LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVS-PEFMSLYIALSCYTAAFIAEIV 285 +I G P +V + + Y FI +TV+ + + +A +AA++AEIV Sbjct: 74 TVIRGTPVVVQLLILY-------------FIIFATVNIDKTLVAILAFGLNSAAYVAEIV 120 Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345 RSG++++ GQ EA +LGL + K ++LPQA ++I+P L ++ + LLK +S+A + Sbjct: 121 RSGIMSIDNGQFEAGASLGLNYSKTMLCIILPQAFKNILPALANECIVLLKETSVAGYIA 180 Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 DL G I +QT +A ++ IYL + + ++ + +L ++A ++ Sbjct: 181 LVDLTKGGDIIRSQTYEAFLPLIAVAIIYLVMVMFLSAMVTKLERRLAKSDR 232 >gi|288936937|ref|YP_003440996.1| polar amino acid ABC transporter inner membrane subunit [Klebsiella variicola At-22] gi|288891646|gb|ADC59964.1| polar amino acid ABC transporter, inner membrane subunit [Klebsiella variicola At-22] Length = 250 Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 49/136 (36%), Positives = 76/136 (55%) Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321 ++PEF+ L +T+AF+ E + SGL AV GQ EAA++ G T + R +LLPQ + Sbjct: 110 LTPEFLCSMWGLGVFTSAFLVEEIASGLRAVSHGQREAALSQGFTPWQELRFILLPQGLA 169 Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 + P+ QYLNL+K SSLA +GFA+L I + A+E + +YL+L + + Sbjct: 170 NAWQPIVGQYLNLMKLSSLASGIGFAELTYQVRQIESYNAHALEAFAVGTALYLALGVAM 229 Query: 382 ALFMNRLNAKIALKEK 397 + + RL L+ Sbjct: 230 GVALTRLGPGRKLQRS 245 >gi|111022633|ref|YP_705605.1| glutamine transport system permease protein [Rhodococcus jostii RHA1] gi|110822163|gb|ABG97447.1| probable glutamine transport system permease protein [Rhodococcus jostii RHA1] Length = 489 Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 55/176 (31%), Positives = 96/176 (54%), Gaps = 23/176 (13%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 + PLL + F+ FG+P AL +Q+ F + I LS Sbjct: 335 RGTPLLVQAFFIYFGIPA----ALDFQMS-------------------AFTAGIITLSLN 371 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 A++AEIVR G+++V +GQMEA+ +LG+++ K+ + V++PQA+R++IP +Q++ LK Sbjct: 372 AGAYMAEIVRGGILSVDKGQMEASRSLGISYLKSMQKVVMPQAVRTMIPSYINQFVITLK 431 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 ++S+ +G A+L G II + Q+ + LI +Y + + + NRL +I Sbjct: 432 DTSILSVIGLAELTQTGRIIIARNFQSFNMWLIIGVMYFIIIMALTKLSNRLEKRI 487 Score = 37.4 bits (85), Expect = 4.4, Method: Compositional matrix adjust. Identities = 31/96 (32%), Positives = 46/96 (47%), Gaps = 13/96 (13%) Query: 107 ATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLP 166 A ++G + G R+S N ++ I YV+VFR P LV FF+Y IP L Sbjct: 305 ALVLGAIFGLFRVSTNIVLRGIGTTYVDVFRGTPLLVQAFFIY------FGIP---AALD 355 Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL 202 F M G+ +T+ NA ++ V G +LS+ Sbjct: 356 FQMSAFTAGI----ITLSLNAGAYMAEIVRGGILSV 387 >gi|323698192|ref|ZP_08110104.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio sp. ND132] gi|323458124|gb|EGB13989.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio desulfuricans ND132] Length = 336 Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 64/206 (31%), Positives = 108/206 (52%), Gaps = 5/206 (2%) Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247 ++ + S GI++ LF T LSR K + YI LI G P LV I + Y + Sbjct: 134 EVSIISIFFGILIGLF-TGLSRISSNPFLKMSAITYIE--LIRGTPLLVQIMIWYFVL-- 188 Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307 +L G PE +L+ + A++AEIVR+G+ ++ +GQMEAA +LG+T Sbjct: 189 GTILNNLLIKAGLFQIPELWFGVASLAIFAGAYVAEIVRAGIQSIHKGQMEAARSLGMTK 248 Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367 A R ++LPQA + I+PPL Q+++L+K+SSL + +L + + E+ Sbjct: 249 VTAMRKIILPQAFKRILPPLAGQFISLIKDSSLLGVMAIRELTKATREAVTTSLMPYELW 308 Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIA 393 + +YL ++ +++F+ L + A Sbjct: 309 FVCGVLYLVITFTLSMFVQYLEKRTA 334 >gi|317046629|ref|YP_004114277.1| polar amino acid ABC transporter inner membrane subunit [Pantoea sp. At-9b] gi|316948246|gb|ADU67721.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea sp. At-9b] Length = 251 Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 67/215 (31%), Positives = 111/215 (51%), Gaps = 30/215 (13%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS------TFLIFGLPTLVLIALKYQL 244 +F+F +GI+L L RLS P ++S +L+ G+P ++++ Y Sbjct: 40 LFAFPVGILLGL--ARLS-----------PWRWLSWPATCWVYLLRGIPLMMVVFWTY-- 84 Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304 F P+L N G F ++ L Y +A+IAEIVR G+ A+P GQ EAA ALG Sbjct: 85 -FCVPLLIGHNISG-------FSTMLCTLVIYESAYIAEIVRGGIQALPHGQYEAARALG 136 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ-TGQA 363 + H K RLV+LPQA+ + +P L SQ ++++K+S+L + +L + NQ + Sbjct: 137 MGHIKTLRLVILPQALFNTLPSLVSQLVSIIKDSTLGYVINVPELTFAANQVSNQLLTKP 196 Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 ++ I Y + + N+L A++A K ++ Sbjct: 197 FQVFAIVALSYYIICFSLTWLANQLEARLAQKRRQ 231 >gi|12056613|gb|AAG47970.1| mimosine transporter permease [Rhizobium sp. TAL1145] Length = 234 Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 58/152 (38%), Positives = 85/152 (55%), Gaps = 7/152 (4%) Query: 231 GLPTLVLIALKYQLH--FDK-----PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283 G P LV + L Y L F P LG I +TV ++ +ALS + A ++AE Sbjct: 35 GTPALVQLILWYNLSLIFKDITLWLPGLGTVFSIPTNTVMTPLVAAVVALSLHEAGYMAE 94 Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343 I+R+GL +V RGQ EAA+ LG+ R +++PQAMR IIPP ++ +NLLK +SL Sbjct: 95 IIRNGLKSVNRGQTEAALCLGMKPSLLLRRIVIPQAMRVIIPPTGNETINLLKTTSLVSI 154 Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375 + DL+ I +T + I ++L+ F YL Sbjct: 155 IAVGDLLYSAQAIYARTFETIPLLLVATFWYL 186 >gi|289624941|ref|ZP_06457895.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289650482|ref|ZP_06481825.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. aesculi str. 2250] gi|330867231|gb|EGH01940.1| amino acid ABC transporter permease [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 248 Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 49/129 (37%), Positives = 77/129 (59%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+S+ + L +TAA + E VR+G+ A+P+GQ AA A+G + VLLPQA R IIP Sbjct: 111 FLSVVVCLGLFTAARVCEQVRTGIEALPKGQESAARAMGFKLPQIYWNVLLPQAYRIIIP 170 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PLTS++LN+ KNSS+A +G +L++ + E + IY +L++ + L M Sbjct: 171 PLTSEFLNVFKNSSVASLIGLMELLAQTKQTAEFSANLFEAFTLATLIYFTLNMSLMLLM 230 Query: 386 NRLNAKIAL 394 + K+A+ Sbjct: 231 RMIEKKVAV 239 Score = 41.6 bits (96), Expect = 0.25, Method: Compositional matrix adjust. Identities = 21/48 (43%), Positives = 32/48 (66%) Query: 110 IGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLP 157 +G+++G R ++LV+ I VYVE+FRN+P LV +F Y V +LP Sbjct: 46 LGSVLGVMRTVPSRLVSGIATVYVEIFRNVPLLVQLFIWYFLVPDLLP 93 >gi|251790579|ref|YP_003005300.1| polar amino acid ABC transporter inner membrane subunit [Dickeya zeae Ech1591] gi|247539200|gb|ACT07821.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya zeae Ech1591] Length = 281 Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 53/126 (42%), Positives = 77/126 (61%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F S IALS A++AE +RSG++AVPRGQ EAA+ALGL+ T V+ PQA+R IIP Sbjct: 142 FTSGIIALSLNYGAYLAETIRSGVLAVPRGQKEAAMALGLSRWVITTHVVAPQALRIIIP 201 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 P SQ+++++K+SSL +G +L + + T +E++ IY LSI + L Sbjct: 202 PAGSQFISMIKDSSLVSLMGLWELNFLAQSYGRSTYHYMEMLTTAAVIYWLLSIGLELLQ 261 Query: 386 NRLNAK 391 RL + Sbjct: 262 GRLERR 267 >gi|322372850|ref|ZP_08047386.1| polar amino acid uptake (PAAT) family ABC transporter, permease protein [Streptococcus sp. C150] gi|321277892|gb|EFX54961.1| polar amino acid uptake (PAAT) family ABC transporter, permease protein [Streptococcus sp. C150] Length = 232 Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 47/112 (41%), Positives = 76/112 (67%), Gaps = 8/112 (7%) Query: 247 DKPVLGQFN--FIGGSTVSPEFMSLYIALSC------YTAAFIAEIVRSGLIAVPRGQME 298 + P+L QF F G S ++ + L I+L+ YT A+I+EI+R+G+ AVP+GQ E Sbjct: 75 NTPLLVQFVVVFYGISILTDGHIMLPISLTAILCVGIYTGAYISEIIRTGIEAVPKGQTE 134 Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 AA++ G T+ R+++LPQA+R+I+PPLT+Q +NL+KN+S + AD++ Sbjct: 135 AALSQGFTYADTMRIIILPQAVRTILPPLTNQVVNLIKNTSTVAIISGADIM 186 Score = 42.7 bits (99), Expect = 0.11, Method: Compositional matrix adjust. Identities = 29/80 (36%), Positives = 45/80 (56%), Gaps = 7/80 (8%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV--VIFFLY 149 GF T ++ +I A ++G + GA + NK++ I RVYVE+F+N P LV V+ F Sbjct: 29 GFFYTLGISIGALIVALLLGLIFGAMSSTHNKVLRGIARVYVEIFQNTPLLVQFVVVFYG 88 Query: 150 KSVLSVLPIPDHSIVLPFGM 169 S+L+ D I+LP + Sbjct: 89 ISILT-----DGHIMLPISL 103 >gi|297624236|ref|YP_003705670.1| polar amino acid ABC transporter inner membrane subunit [Truepera radiovictrix DSM 17093] gi|297165416|gb|ADI15127.1| polar amino acid ABC transporter, inner membrane subunit [Truepera radiovictrix DSM 17093] Length = 408 Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 56/145 (38%), Positives = 89/145 (61%), Gaps = 12/145 (8%) Query: 262 VSPEFMSLY----IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317 V PE +S +AL+ ++AA++AE VR GL AVP+GQ EAA ALGL+ +A RL++LP Sbjct: 262 VGPERVSALTRALVALTLFSAAYMAENVRGGLQAVPKGQSEAARALGLSGWQAMRLIILP 321 Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377 QA++++IP + Q + L K++SL + VG AD V I+ Q +++++ I L L Sbjct: 322 QALKAVIPAIVGQAIGLFKDTSLVLIVGLADFFQV-HNIVAQQNASLQVV---GGIRLEL 377 Query: 378 SIMIAL----FMNRLNAKIALKEKK 398 S+ +A+ F R++ EK+ Sbjct: 378 SLFLAVVYWFFAYRMSVASRQLEKE 402 >gi|27378024|ref|NP_769553.1| ABC transporter permease [Bradyrhizobium japonicum USDA 110] gi|27351170|dbj|BAC48178.1| blr2913 [Bradyrhizobium japonicum USDA 110] Length = 368 Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 65/202 (32%), Positives = 110/202 (54%), Gaps = 18/202 (8%) Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251 F F LGI+++L R ++L +LY+ LI G+P + L+ + + F + Sbjct: 178 FGFPLGILVAL-----GRRSKLPAIRSLSVLYVE--LIRGVPLVSLLFMA-SVMFPLFMP 229 Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311 FN + + IA+ + A++AE++R GL AVPRGQ EAA ALGL++ + Sbjct: 230 SGFNI-------DKLLRAQIAIILFAGAYLAEVIRGGLQAVPRGQYEAAEALGLSYWRKH 282 Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT-IINQTGQ--AIEIIL 368 RL++LPQA+R +IPPL + ++ K++SL + +G DL++ T II+ Q ++E+ + Sbjct: 283 RLIVLPQAIRHVIPPLVNTFIAFFKDTSLVLIIGIFDLLTTAKTAIIDPAWQQFSVEVYI 342 Query: 369 IWMFIYLSLSIMIALFMNRLNA 390 IY ++ + L A Sbjct: 343 FVAAIYFVFCFAMSRYSRGLEA 364 >gi|322517752|ref|ZP_08070604.1| polar amino acid uptake ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus vestibularis ATCC 49124] gi|322123596|gb|EFX95214.1| polar amino acid uptake ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus vestibularis ATCC 49124] Length = 232 Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 39/92 (42%), Positives = 66/92 (71%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G + P ++ + + YT A+I+EI+R+G+ AVP+GQ EAA++ G T+ R+++LPQ Sbjct: 95 GHVMIPISLTAILCVGVYTGAYISEIIRTGIEAVPKGQTEAALSQGFTYADTMRIIILPQ 154 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 A+R+I+PPLT+Q +NL+KN+S + AD++ Sbjct: 155 AVRTILPPLTNQVVNLIKNTSTVAIISGADIM 186 Score = 40.0 bits (92), Expect = 0.67, Method: Compositional matrix adjust. Identities = 26/80 (32%), Positives = 45/80 (56%), Gaps = 7/80 (8%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV--VIFFLY 149 GF T ++ +I A ++G + GA + NK++ I R+YVE+F+N P LV V+ F Sbjct: 29 GFFYTLGISIGALIVALLLGLIFGAMSSTHNKVLRGISRIYVEIFQNTPLLVQFVVVFYG 88 Query: 150 KSVLSVLPIPDHSIVLPFGM 169 S+L+ D +++P + Sbjct: 89 ISILT-----DGHVMIPISL 103 >gi|300870920|ref|YP_003785791.1| amino acid transport system permease [Brachyspira pilosicoli 95/1000] gi|300688619|gb|ADK31290.1| amino acid transport system permease protein [Brachyspira pilosicoli 95/1000] Length = 237 Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 48/141 (34%), Positives = 87/141 (61%), Gaps = 2/141 (1%) Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315 F+G +P + IA +AA++AEI+R+G+ + +GQMEA+ ALGL + + + ++ Sbjct: 97 FVGALRNTPILIISAIAFGINSAAYVAEIIRAGIEGLDKGQMEASRALGLNYGLSMKEII 156 Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375 +PQA++ I+P L S+++ L+K +S+ +G DL+ I +QT + +E ++ IYL Sbjct: 157 IPQAIKKILPALVSEFITLIKETSIVGFIGGVDLLRSANIITSQTYRGVEPLIAVGIIYL 216 Query: 376 SLSIMIALFMNRLNAKIALKE 396 L+ + A+FM ++ LKE Sbjct: 217 ILTSIFAMFMRKVEK--GLKE 235 >gi|284009202|emb|CBA76273.1| amino acid ABC transporter, permease protein [Arsenophonus nasoniae] Length = 245 Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 47/100 (47%), Positives = 69/100 (69%) Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322 S EF++ I L Y+ FIAE +R+G+ V +GQ AA+ALGL+ +A R V+LPQA++ Sbjct: 111 SFEFLAGVIGLILYSTPFIAEELRAGIYGVKQGQNFAALALGLSDWQAMRYVVLPQALKI 170 Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362 +PPL QY+N++KNSSL +A+G A+L V I +Q+ Q Sbjct: 171 AMPPLLGQYMNIVKNSSLTMAIGVAELSYVSRQIESQSLQ 210 Score = 41.2 bits (95), Expect = 0.28, Method: Compositional matrix adjust. Identities = 23/74 (31%), Positives = 41/74 (55%) Query: 84 SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143 Y I G + T ++F ++ ++++G +V A R S + W+ Y+ +FRN P L+ Sbjct: 14 EYFDWIWQGLLITIGISFCAIVFSSLLGFVVVAARDSHIVFLRWLAISYISLFRNTPLLI 73 Query: 144 VIFFLYKSVLSVLP 157 +FF Y +V +LP Sbjct: 74 QLFFWYFAVGGILP 87 >gi|228478438|ref|ZP_04063042.1| ABC-type amino acid transport system, permease component [Streptococcus salivarius SK126] gi|312862640|ref|ZP_07722880.1| ABC transporter, permease protein [Streptococcus vestibularis F0396] gi|312862691|ref|ZP_07722931.1| ABC transporter, permease protein [Streptococcus vestibularis F0396] gi|228249796|gb|EEK09083.1| ABC-type amino acid transport system, permease component [Streptococcus salivarius SK126] gi|311101500|gb|EFQ59703.1| ABC transporter, permease protein [Streptococcus vestibularis F0396] gi|311101551|gb|EFQ59754.1| ABC transporter, permease protein [Streptococcus vestibularis F0396] Length = 232 Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 39/92 (42%), Positives = 66/92 (71%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G + P ++ + + YT A+I+EI+R+G+ AVP+GQ EAA++ G T+ R+++LPQ Sbjct: 95 GHVMIPISLTAILCVGVYTGAYISEIIRTGIEAVPKGQTEAALSQGFTYADTMRIIILPQ 154 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 A+R+I+PPLT+Q +NL+KN+S + AD++ Sbjct: 155 AVRTILPPLTNQVVNLIKNTSTVAIISGADIM 186 Score = 40.4 bits (93), Expect = 0.44, Method: Compositional matrix adjust. Identities = 27/80 (33%), Positives = 45/80 (56%), Gaps = 7/80 (8%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV--VIFFLY 149 GF T ++ +I A ++G + GA + NK++ I RVYVE+F+N P LV V+ F Sbjct: 29 GFFYTLGISIGALIVALLLGLIFGAMSSTHNKVLRGISRVYVEIFQNTPLLVQFVVVFYG 88 Query: 150 KSVLSVLPIPDHSIVLPFGM 169 S+L+ D +++P + Sbjct: 89 ISILT-----DGHVMIPISL 103 >gi|226365139|ref|YP_002782922.1| glutamine ABC transporter glutamine-binding/permease protein [Rhodococcus opacus B4] gi|226243629|dbj|BAH53977.1| putative glutamine ABC transporter glutamine-binding/permease protein [Rhodococcus opacus B4] Length = 489 Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 55/176 (31%), Positives = 96/176 (54%), Gaps = 23/176 (13%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 + PLL + F+ FG+P AL +Q+ F + I LS Sbjct: 335 RGTPLLVQAFFIYFGIPA----ALDFQMS-------------------AFTAGIITLSLN 371 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 A++AEIVR G+++V +GQMEA+ +LG+++ K+ + V++PQA+R++IP +Q++ LK Sbjct: 372 AGAYMAEIVRGGILSVDKGQMEASRSLGISYLKSMQKVVMPQAVRTMIPSYINQFVITLK 431 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 ++S+ +G A+L G II + Q+ + LI +Y + + + NRL +I Sbjct: 432 DTSILSVIGLAELTQTGRIIIARNFQSFNMWLIIGVMYFIIIMALTKLSNRLEKRI 487 Score = 37.4 bits (85), Expect = 4.1, Method: Compositional matrix adjust. Identities = 31/96 (32%), Positives = 46/96 (47%), Gaps = 13/96 (13%) Query: 107 ATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLP 166 A ++G + G R+S N ++ I YV+VFR P LV FF+Y IP L Sbjct: 305 ALVLGAIFGLFRVSTNIVLRGIGTTYVDVFRGTPLLVQAFFIY------FGIP---AALD 355 Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL 202 F M G+ +T+ NA ++ V G +LS+ Sbjct: 356 FQMSAFTAGI----ITLSLNAGAYMAEIVRGGILSV 387 >gi|77460757|ref|YP_350264.1| amino acid ABC transporter permease [Pseudomonas fluorescens Pf0-1] gi|77384760|gb|ABA76273.1| L-aspartate ABC transporter membrane protein / L-glutamate ABC transporter membrane protein [Pseudomonas fluorescens Pf0-1] Length = 248 Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 49/129 (37%), Positives = 77/129 (59%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 ++S+ + L +TAA + E VR+G+ A+PRGQ AA A+G + VLLPQA R IIP Sbjct: 111 YLSVVVCLGLFTAARVCEQVRTGIQALPRGQESAARAMGFKLPQIYWNVLLPQAYRIIIP 170 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PLTS++LN+ KNSS+A +G +L++ + E + IY +L++ + L M Sbjct: 171 PLTSEFLNVFKNSSVASLIGLMELLAQTKQTAEFSANLFEAFTLATLIYFTLNMSLMLLM 230 Query: 386 NRLNAKIAL 394 + K+A+ Sbjct: 231 RMVEKKVAV 239 Score = 42.7 bits (99), Expect = 0.088, Method: Compositional matrix adjust. Identities = 23/52 (44%), Positives = 34/52 (65%), Gaps = 1/52 (1%) Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPD 160 ++G+L+G R N++V+ I YVE+FRN+P LV +F Y V +LP PD Sbjct: 45 LLGSLLGIMRTVPNRIVSGIATCYVELFRNVPLLVQLFIWYFLVPDLLP-PD 95 >gi|283786454|ref|YP_003366319.1| putative membrane component of ABC transporter [Citrobacter rodentium ICC168] gi|282949908|emb|CBG89533.1| putative membrane component of ABC transporter [Citrobacter rodentium ICC168] Length = 254 Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 47/131 (35%), Positives = 76/131 (58%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+S +A++ A+++EI R+G+ ++ GQMEA+ ALG+ K R V+LPQA R I+P Sbjct: 122 FLSCIVAITLNAGAYVSEIFRAGIQSIDPGQMEASRALGMPWWKTMRKVILPQAFRRILP 181 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PL + + ++K+SSLA A+G ADL T+ E L +Y L+ ++A + Sbjct: 182 PLGNNAIAIVKDSSLASAIGLADLAYAARTVSGAYATYWEPYLTISLVYWVLTFLLAQMV 241 Query: 386 NRLNAKIALKE 396 NRL + + Sbjct: 242 NRLEKRFGKSD 252 >gi|89902913|ref|YP_525384.1| amino acid ABC transporter permease [Rhodoferax ferrireducens T118] gi|89347650|gb|ABD71853.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Rhodoferax ferrireducens T118] Length = 222 Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 45/129 (34%), Positives = 82/129 (63%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P F+ I L Y+ A+++EIVR + ++ RGQMEAA ++G+++ A R ++LPQA+ + Sbjct: 87 PAFVCGVIGLGIYSGAYVSEIVRGSIQSIDRGQMEAARSVGMSYGTAMRTIILPQALVRM 146 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 IPPL ++++ L+KNS+L + D++ G II+ T +++E+ L IY L+ + L Sbjct: 147 IPPLGNEFIALIKNSALVSLLTIHDVMHEGQKIISVTYRSLEVYLAIAAIYFVLTGLTTL 206 Query: 384 FMNRLNAKI 392 + R+ ++ Sbjct: 207 ALRRIEQRL 215 >gi|313496643|gb|ADR58009.1| Polar amino acid ABC transporter, inner membrane subunit [Pseudomonas putida BIRD-1] Length = 229 Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 69/205 (33%), Positives = 111/205 (54%), Gaps = 17/205 (8%) Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240 LT++ A V +L I L + R SRH++ + A+P YI F G P LV + L Sbjct: 19 LTLELVAIAVVAGLILAIPLGI--ARSSRHWYVR---AVPFSYI--FFFRGTPLLVQLFL 71 Query: 241 KYQLHFDKPVLGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296 Y L QF+ + S++ P F + ++ +TAA+IAEI+R L ++P+G+ Sbjct: 72 VYY------GLAQFDAVRSSSLWPYLRDPFWCTVLTMTLHTAAYIAEILRGALQSIPKGE 125 Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356 +EAA ALG++ KA ++LP+A R +P +++ + +LK S+LA V +L + TI Sbjct: 126 IEAARALGMSRGKALFYIMLPRAARIGLPAYSNEVILMLKASALASTVTLLELTGMARTI 185 Query: 357 INQTGQAIEIILIWMFIYLSLSIMI 381 I +T +EI YL +S M+ Sbjct: 186 IARTYLPVEIFFAAGVFYLVISFML 210 >gi|262362593|gb|ACY59314.1| glutamate/aspartate transport system permease [Yersinia pestis D106004] Length = 205 Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 44/127 (34%), Positives = 78/127 (61%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 +S +A S + AA+ +EI+R+G+ ++ RGQ AA+ALG+T ++ RLV+LPQA R+++ Sbjct: 77 RLISAMVAFSLFEAAYYSEIIRAGIQSISRGQSSAALALGMTQGQSMRLVILPQAFRAMV 136 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 P L +Q + L +++SL + AD TI + G +E++L +Y +SI ++ Sbjct: 137 PLLLTQGIVLFQDTSLVYVLSLADFFRTATTIGERDGTQVEMVLFAGLVYFVISISASML 196 Query: 385 MNRLNAK 391 +N L + Sbjct: 197 VNYLKKR 203 Score = 37.4 bits (85), Expect = 4.1, Method: Compositional matrix adjust. Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 7/57 (12%) Query: 111 GTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY-------KSVLSVLPIPD 160 GT++ RLS K ++W YV VFR+IP ++V+ + Y ++VL + P D Sbjct: 19 GTILAVMRLSPIKAISWFATAYVNVFRSIPLVMVLLWFYLVVPGFLQNVLGLSPKTD 75 >gi|222153406|ref|YP_002562583.1| amino acid ABC transporter permease [Streptococcus uberis 0140J] gi|222114219|emb|CAR42794.1| putative amino acid ABC transporter permease protein [Streptococcus uberis 0140J] Length = 229 Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 58/186 (31%), Positives = 107/186 (57%), Gaps = 12/186 (6%) Query: 220 PLLYISTFLIF---GLPTLVLIALKYQ-LHFDKPVLGQFNFIGGSTVSPEFMSLY---IA 272 PL +++ F ++ G P +V I + + +HF+ + NF + +F L I Sbjct: 48 PLKWLANFYVWIFRGTPMVVQIMIAFAWMHFNN--MPTVNF---GVLDLDFSRLLPGIII 102 Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 +S + A+I+EIVR+G+ AVP+GQ+EAA +LG+ + A R V+LPQA ++I+P L ++++ Sbjct: 103 ISLNSGAYISEIVRAGIEAVPKGQLEAAYSLGIRPKNAMRYVILPQAFKNILPALGNEFI 162 Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 ++K+S+L +G +L + T++ T I +L F YL ++ +++ + L K+ Sbjct: 163 TIIKDSALLQTIGVMELWNGAQTVVTSTYLPITPLLFAAFYYLMVTTVLSYLLTILENKM 222 Query: 393 ALKEKK 398 KK Sbjct: 223 GQGVKK 228 >gi|22125090|ref|NP_668513.1| glutamate/aspartate inner membrane permease [Yersinia pestis KIM 10] gi|45440930|ref|NP_992469.1| putative glutamate/aspartate transport system permease [Yersinia pestis biovar Microtus str. 91001] gi|51595453|ref|YP_069644.1| ABC glutamate/aspartate transporter, permease subunit gltK [Yersinia pseudotuberculosis IP 32953] gi|108808477|ref|YP_652393.1| putative glutamate/aspartate transport system permease [Yersinia pestis Antiqua] gi|108811262|ref|YP_647029.1| glutamate/aspartate transport system permease [Yersinia pestis Nepal516] gi|145599903|ref|YP_001163979.1| glutamate/aspartate transport system permease [Yersinia pestis Pestoides F] gi|149365486|ref|ZP_01887521.1| putative glutamate/aspartate transport system permease [Yersinia pestis CA88-4125] gi|153946873|ref|YP_001401884.1| glutamate/aspartate ABC transporter permease GltK [Yersinia pseudotuberculosis IP 31758] gi|162421571|ref|YP_001606325.1| glutamate/aspartate ABC transporter permease GltK [Yersinia pestis Angola] gi|165925298|ref|ZP_02221130.1| glutamate/aspartate ABC transporter, permease protein GltK [Yersinia pestis biovar Orientalis str. F1991016] gi|165937730|ref|ZP_02226292.1| glutamate/aspartate ABC transporter, permease protein GltK [Yersinia pestis biovar Orientalis str. IP275] gi|166008308|ref|ZP_02229206.1| glutamate/aspartate ABC transporter, permease protein GltK [Yersinia pestis biovar Antiqua str. E1979001] gi|166212318|ref|ZP_02238353.1| glutamate/aspartate ABC transporter, permease protein GltK [Yersinia pestis biovar Antiqua str. B42003004] gi|167398818|ref|ZP_02304342.1| glutamate/aspartate ABC transporter, permease protein GltK [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167422495|ref|ZP_02314248.1| glutamate/aspartate ABC transporter, permease protein GltK [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167423767|ref|ZP_02315520.1| glutamate/aspartate ABC transporter, permease protein GltK [Yersinia pestis biovar Mediaevalis str. K1973002] gi|167468412|ref|ZP_02333116.1| glutamate/aspartate ABC transporter, permease protein GltK [Yersinia pestis FV-1] gi|170025233|ref|YP_001721738.1| polar amino acid ABC transporter inner membrane subunit [Yersinia pseudotuberculosis YPIII] gi|186894484|ref|YP_001871596.1| polar amino acid ABC transporter inner membrane subunit [Yersinia pseudotuberculosis PB1/+] gi|218929694|ref|YP_002347569.1| putative glutamate/aspartate transport system permease [Yersinia pestis CO92] gi|229838160|ref|ZP_04458319.1| glutamate and aspartate transporter subunit, membrane component of ABC superfamily [Yersinia pestis biovar Orientalis str. PEXU2] gi|229895952|ref|ZP_04511122.1| glutamate and aspartate transporter subunit, membrane component of ABC superfamily [Yersinia pestis Pestoides A] gi|229898729|ref|ZP_04513874.1| glutamate and aspartate transporter subunit, membrane component of ABC superfamily [Yersinia pestis biovar Orientalis str. India 195] gi|229901500|ref|ZP_04516622.1| glutamate and aspartate transporter subunit, membrane component of ABC superfamily [Yersinia pestis Nepal516] gi|270489686|ref|ZP_06206760.1| ABC transporter, permease protein [Yersinia pestis KIM D27] gi|294504417|ref|YP_003568479.1| putative glutamate/aspartate transport system permease [Yersinia pestis Z176003] gi|21957945|gb|AAM84764.1|AE013722_3 glutamate/aspartate inner membrane permease [Yersinia pestis KIM 10] gi|45435789|gb|AAS61346.1| putative glutamate/aspartate transport system permease [Yersinia pestis biovar Microtus str. 91001] gi|51588735|emb|CAH20346.1| ABC glutamate/aspartate transporter, permease subunit gltK [Yersinia pseudotuberculosis IP 32953] gi|108774910|gb|ABG17429.1| glutamate/aspartate transport system permease [Yersinia pestis Nepal516] gi|108780390|gb|ABG14448.1| putative glutamate/aspartate transport system permease [Yersinia pestis Antiqua] gi|115348305|emb|CAL21236.1| putative glutamate/aspartate transport system permease [Yersinia pestis CO92] gi|145211599|gb|ABP41006.1| glutamate/aspartate transport system permease [Yersinia pestis Pestoides F] gi|149291899|gb|EDM41973.1| putative glutamate/aspartate transport system permease [Yersinia pestis CA88-4125] gi|152958368|gb|ABS45829.1| glutamate/aspartate ABC transporter, permease protein GltK [Yersinia pseudotuberculosis IP 31758] gi|162354386|gb|ABX88334.1| glutamate/aspartate ABC transporter, permease protein GltK [Yersinia pestis Angola] gi|165914480|gb|EDR33095.1| glutamate/aspartate ABC transporter, permease protein GltK [Yersinia pestis biovar Orientalis str. IP275] gi|165922905|gb|EDR40056.1| glutamate/aspartate ABC transporter, permease protein GltK [Yersinia pestis biovar Orientalis str. F1991016] gi|165992690|gb|EDR44991.1| glutamate/aspartate ABC transporter, permease protein GltK [Yersinia pestis biovar Antiqua str. E1979001] gi|166206249|gb|EDR50729.1| glutamate/aspartate ABC transporter, permease protein GltK [Yersinia pestis biovar Antiqua str. B42003004] gi|166958509|gb|EDR55530.1| glutamate/aspartate ABC transporter, permease protein GltK [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167051322|gb|EDR62730.1| glutamate/aspartate ABC transporter, permease protein GltK [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167057937|gb|EDR67683.1| glutamate/aspartate ABC transporter, permease protein GltK [Yersinia pestis biovar Mediaevalis str. K1973002] gi|169751767|gb|ACA69285.1| polar amino acid ABC transporter, inner membrane subunit [Yersinia pseudotuberculosis YPIII] gi|186697510|gb|ACC88139.1| polar amino acid ABC transporter, inner membrane subunit [Yersinia pseudotuberculosis PB1/+] gi|229681429|gb|EEO77523.1| glutamate and aspartate transporter subunit, membrane component of ABC superfamily [Yersinia pestis Nepal516] gi|229688277|gb|EEO80348.1| glutamate and aspartate transporter subunit, membrane component of ABC superfamily [Yersinia pestis biovar Orientalis str. India 195] gi|229694526|gb|EEO84573.1| glutamate and aspartate transporter subunit, membrane component of ABC superfamily [Yersinia pestis biovar Orientalis str. PEXU2] gi|229700875|gb|EEO88904.1| glutamate and aspartate transporter subunit, membrane component of ABC superfamily [Yersinia pestis Pestoides A] gi|270338190|gb|EFA48967.1| ABC transporter, permease protein [Yersinia pestis KIM D27] gi|294354876|gb|ADE65217.1| putative glutamate/aspartate transport system permease [Yersinia pestis Z176003] gi|320016183|gb|ADV99754.1| glutamate and aspartate transporter subunit, membrane component of ABC superfamily [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 224 Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 44/127 (34%), Positives = 78/127 (61%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 +S +A S + AA+ +EI+R+G+ ++ RGQ AA+ALG+T ++ RLV+LPQA R+++ Sbjct: 96 RLISAMVAFSLFEAAYYSEIIRAGIQSISRGQSSAALALGMTQGQSMRLVILPQAFRAMV 155 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 P L +Q + L +++SL + AD TI + G +E++L +Y +SI ++ Sbjct: 156 PLLLTQGIVLFQDTSLVYVLSLADFFRTATTIGERDGTQVEMVLFAGLVYFVISISASML 215 Query: 385 MNRLNAK 391 +N L + Sbjct: 216 VNYLKKR 222 Score = 37.4 bits (85), Expect = 4.0, Method: Compositional matrix adjust. Identities = 19/61 (31%), Positives = 34/61 (55%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G + T + ++ + GT++ RLS K ++W YV VFR+IP ++V+ + Sbjct: 16 LLQGLIVTVKITLIAIVFGILWGTILAVMRLSPIKAISWFATAYVNVFRSIPLVMVLLWF 75 Query: 149 Y 149 Y Sbjct: 76 Y 76 >gi|227112257|ref|ZP_03825913.1| ABC transporter permease protein [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 225 Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 47/138 (34%), Positives = 86/138 (62%), Gaps = 1/138 (0%) Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320 T SP F + IALS ++AF AE+ R + ++ GQ E A ALG++ A R V+LPQA+ Sbjct: 87 TFSP-FTAAVIALSAQSSAFYAEVYRGAISSIHTGQWEGAKALGMSKSTALRRVILPQAL 145 Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380 R +IPP + L+K++SLA ++ +++L+ I +QT + +E+ + +Y +L ++ Sbjct: 146 RRMIPPFIERSFELIKSTSLASSLAYSELLYQAMQINSQTYRPLEVYSLVAVMYFTLLLL 205 Query: 381 IALFMNRLNAKIALKEKK 398 I+LF + +++L +++ Sbjct: 206 ISLFSQHIEKRLSLTDRR 223 >gi|269796950|ref|YP_003316405.1| amino acid ABC transporter membrane protein [Sanguibacter keddieii DSM 10542] gi|269099135|gb|ACZ23571.1| amino acid ABC transporter membrane protein [Sanguibacter keddieii DSM 10542] Length = 288 Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 49/136 (36%), Positives = 85/136 (62%), Gaps = 2/136 (1%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 F ++ I L+ Y AA +AEI+R+GL A+P+GQ EA A+GLT + RLV LPQ +R ++ Sbjct: 137 SFQAVVIGLTLYNAAIVAEILRAGLAALPKGQAEAGTAIGLTRGQTLRLVQLPQVIRLML 196 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN--QTGQAIEIILIWMFIYLSLSIMIA 382 P L SQ++ LLK+SSL VG+ +L++ T N + + + L+ +YL+++I ++ Sbjct: 197 PSLISQFVVLLKDSSLGFIVGYPELLNAMKTNYNFFGSDSRLPLFLVVAVVYLTVNIALS 256 Query: 383 LFMNRLNAKIALKEKK 398 + +++ + +K Sbjct: 257 RLAVYIEKRLSSRGQK 272 >gi|229120292|ref|ZP_04249542.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus 95/8201] gi|228663102|gb|EEL18692.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus 95/8201] Length = 214 Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 61/172 (35%), Positives = 95/172 (55%), Gaps = 37/172 (21%) Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247 KI V S VLGI++ + + LPLL I F F LP LK ++ Sbjct: 47 KIPVVSQVLGIIVEVI-------------RNLPLLLIIFFTYFALPEA---GLKLEI--- 87 Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307 +++ +AL+ + AA I+EIVRSGL+++ +GQ+EAA + GLT+ Sbjct: 88 ------------------IIAVIVALTIFEAAMISEIVRSGLLSIEKGQIEAARSSGLTY 129 Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359 +A ++LPQA+R ++PPL SQ+++LLK++SLAVA+ +L+ I Q Sbjct: 130 VQALWHIILPQALRRMVPPLVSQFISLLKDTSLAVAISLPELMHNAQIISGQ 181 Score = 38.5 bits (88), Expect = 1.7, Method: Compositional matrix adjust. Identities = 21/61 (34%), Positives = 37/61 (60%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G + T +A ++ + IIG+++G R +V+ + + VEV RN+P L++IFF Sbjct: 15 LLKGLLITLEVALVAIVLSFIIGSVIGILRYMKIPVVSQVLGIIVEVIRNLPLLLIIFFT 74 Query: 149 Y 149 Y Sbjct: 75 Y 75 >gi|206578453|ref|YP_002240193.1| putative amino acid ABC transporter, permease protein [Klebsiella pneumoniae 342] gi|206567511|gb|ACI09287.1| putative amino acid ABC transporter, permease protein [Klebsiella pneumoniae 342] Length = 250 Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 49/136 (36%), Positives = 76/136 (55%) Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321 ++PEF+ L +T+AF+ E + SGL AV GQ EAA++ G T + R +LLPQ + Sbjct: 110 LTPEFLCSMWGLGIFTSAFLVEEIASGLRAVSHGQREAALSQGFTPWQELRFILLPQGLA 169 Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 + P+ QYLNL+K SSLA +GFA+L I + A+E + +YL+L + + Sbjct: 170 NAWQPIVGQYLNLMKLSSLASGIGFAELTYQVRQIESYNAHALEAFAVGTALYLALGVAM 229 Query: 382 ALFMNRLNAKIALKEK 397 + + RL L+ Sbjct: 230 GVALTRLGPGRKLQRS 245 >gi|325267568|ref|ZP_08134220.1| amino acid ABC superfamily ATP binding cassette transporter, permease protein [Kingella denitrificans ATCC 33394] gi|324980918|gb|EGC16578.1| amino acid ABC superfamily ATP binding cassette transporter, permease protein [Kingella denitrificans ATCC 33394] Length = 245 Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 49/121 (40%), Positives = 76/121 (62%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +AL+ A+I EI R+G+ ++ RGQMEAA +LGLT+ +A R V+LPQA+R ++PPL ++ Sbjct: 118 LALTVNAGAYITEIFRAGIQSIDRGQMEAARSLGLTYAQAMRYVILPQALRRMLPPLANE 177 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++ L+K+SSL A+ A+L V TI + + IYL LS+ ++ RL Sbjct: 178 FITLMKDSSLLSAIAVAELAYVQSTISGRYSIYEAPLYTVALIYLILSMGLSWIFARLEK 237 Query: 391 K 391 K Sbjct: 238 K 238 >gi|218888237|ref|YP_002437558.1| polar amino acid ABC transporter inner membrane protein [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218759191|gb|ACL10090.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 229 Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 52/132 (39%), Positives = 83/132 (62%), Gaps = 10/132 (7%) Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287 +I G+P L+LI + +F P+ + G T+ PE S +A +T A+IAEIVR+ Sbjct: 68 IIRGIPLLMLI---FWFYFLAPI------VLGRTL-PEAESALVAFIVFTGAYIAEIVRA 117 Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347 G++A+P GQMEAA GL+ +A V+LPQA+R++IP +Q+++L K++SLA +G + Sbjct: 118 GVLALPHGQMEAARGTGLSKSQAMIYVILPQALRNMIPSFVNQFVSLTKDTSLAYIIGVS 177 Query: 348 DLVSVGGTIINQ 359 +L I N+ Sbjct: 178 ELTRTATQINNR 189 >gi|330957763|gb|EGH58023.1| amino acid ABC transporter permease [Pseudomonas syringae pv. maculicola str. ES4326] Length = 248 Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 49/129 (37%), Positives = 77/129 (59%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+S+ + L +TAA + E VR+G+ A+P+GQ AA A+G + VLLPQA R IIP Sbjct: 111 FLSVVVCLGLFTAARVCEQVRTGIEALPKGQESAARAMGFKLPQIYCNVLLPQAYRIIIP 170 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PLTS++LN+ KNSS+A +G +L++ + E + IY +L++ + L M Sbjct: 171 PLTSEFLNVFKNSSVASLIGLMELLAQTKQTAEFSANLFEAFTLATLIYFTLNMSLMLLM 230 Query: 386 NRLNAKIAL 394 + K+A+ Sbjct: 231 RMIEKKVAV 239 Score = 43.9 bits (102), Expect = 0.040, Method: Compositional matrix adjust. Identities = 22/49 (44%), Positives = 33/49 (67%) Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLP 157 ++G+++G R N+LV+ I VYVE+FRN+P LV +F Y V +LP Sbjct: 45 LLGSVLGVMRTVPNRLVSGIATVYVEIFRNVPLLVQLFIWYFLVPDLLP 93 >gi|327400780|ref|YP_004341619.1| polar amino acid ABC transporter inner membrane subunit [Archaeoglobus veneficus SNP6] gi|327316288|gb|AEA46904.1| polar amino acid ABC transporter, inner membrane subunit [Archaeoglobus veneficus SNP6] Length = 224 Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 50/138 (36%), Positives = 86/138 (62%), Gaps = 1/138 (0%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G + PE + +AL+ + A+IAEI+R+G+ +VP+GQMEAA +LG+++ +A R V+ PQ Sbjct: 86 GINLPPEPAGI-LALTLNSGAYIAEIIRAGIQSVPKGQMEAARSLGMSYFQAMRYVVFPQ 144 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378 A R+I+P L ++++ LLK+SSL + A+L VG I + T A +L YL ++ Sbjct: 145 AFRNILPALGNEFIALLKDSSLLSVIAIAELTRVGKQIYSTTFNAWTPLLGVALFYLMMT 204 Query: 379 IMIALFMNRLNAKIALKE 396 + ++ +N ++ E Sbjct: 205 LPLSRLVNYAQKRLGGHE 222 >gi|311069227|ref|YP_003974150.1| glutamine ABC transporter permease [Bacillus atrophaeus 1942] gi|310869744|gb|ADP33219.1| glutamine ABC transporter (permease) [Bacillus atrophaeus 1942] Length = 216 Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 48/127 (37%), Positives = 82/127 (64%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + IAL+ YT+AFIAE +R+G+ +V +GQMEAA + G T+ +A ++LPQA++ ++P Sbjct: 86 FQAGTIALTIYTSAFIAEAIRAGIQSVSKGQMEAARSSGFTYSQAMLYIILPQAIKIVMP 145 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PL +Q+LNL+KNSS+ V DL+ + ++T ++ + YL L+I ++L + Sbjct: 146 PLGNQFLNLVKNSSILGVVAGLDLMYQADLVSSRTLVVFDVYIFVALFYLVLTIPLSLGV 205 Query: 386 NRLNAKI 392 L ++ Sbjct: 206 TYLEKRL 212 Score = 36.2 bits (82), Expect = 9.8, Method: Compositional matrix adjust. Identities = 19/60 (31%), Positives = 31/60 (51%) Query: 90 LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 L GF +T + + + ++G LV R++ K + W YVE RNIP L++ F + Sbjct: 14 LDGFYHTLLASVIALAGSFVLGVLVAVMRITTFKPLQWTGTAYVEFIRNIPLLLITFVFF 73 >gi|229542708|ref|ZP_04431768.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus coagulans 36D1] gi|229327128|gb|EEN92803.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus coagulans 36D1] Length = 219 Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 66/206 (32%), Positives = 109/206 (52%), Gaps = 17/206 (8%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 +F FVLG + +LF H KT K + +Y S F G P +V + L Y F P Sbjct: 31 LFGFVLGTIFALFKIS-----HIKTLKWIGDIYTSIFR--GTPLIVQLMLIY---FAIPQ 80 Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 L G + P F S +A +AA+++EI+R+G+ AV +GQ EAA ALG+ + Sbjct: 81 LT------GYDIQP-FPSAILAFGLNSAAYVSEIIRAGIQAVDKGQTEAAQALGVPYYLM 133 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370 + ++LPQAM++I+P L +++++L K S+L +G+ DL+ + QT E +L Sbjct: 134 MKDLILPQAMKNILPALMNEFVSLTKESALVSTIGYLDLMRRAQVVGAQTYHNFEPLLFV 193 Query: 371 MFIYLSLSIMIALFMNRLNAKIALKE 396 IY L ++ + ++ K+ + Sbjct: 194 AAIYWVLVFILTMLGKQVERKMKYSD 219 >gi|254389484|ref|ZP_05004711.1| glutamate transport system permease protein gluC [Streptomyces clavuligerus ATCC 27064] gi|294815861|ref|ZP_06774504.1| Putative glutamate ABC transporter permease [Streptomyces clavuligerus ATCC 27064] gi|326444203|ref|ZP_08218937.1| glutamate transporter permease [Streptomyces clavuligerus ATCC 27064] gi|197703198|gb|EDY49010.1| glutamate transport system permease protein gluC [Streptomyces clavuligerus ATCC 27064] gi|294328460|gb|EFG10103.1| Putative glutamate ABC transporter permease [Streptomyces clavuligerus ATCC 27064] Length = 214 Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 49/122 (40%), Positives = 78/122 (63%), Gaps = 2/122 (1%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +AL CYT+AFI E +RSG+ VPRGQ EAA +LG++ + +V+LPQA R++IPP+ S Sbjct: 89 LALGCYTSAFICEALRSGINTVPRGQGEAARSLGMSFGQTLTVVILPQAFRTVIPPVGST 148 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI-YLSLSIMIALFMNRLN 389 + L KNS++A A +L+S T +++ G I +W+ + YL +++ I+ N L Sbjct: 149 LIALAKNSAIAGAFSVTELLSTYKT-LSELGYNIVWTFVWIAVGYLIITLTISALFNVLE 207 Query: 390 AK 391 + Sbjct: 208 KR 209 >gi|126699792|ref|YP_001088689.1| amino-acid ABC transporter permease [Clostridium difficile 630] gi|255101314|ref|ZP_05330291.1| amino-acid ABC transporter, permease protein [Clostridium difficile QCD-63q42] gi|255307190|ref|ZP_05351361.1| amino-acid ABC transporter, permease protein [Clostridium difficile ATCC 43255] gi|115251229|emb|CAJ69060.1| ABC-type transport system,cystine/aminoacid-family permease [Clostridium difficile] Length = 222 Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 61/203 (30%), Positives = 114/203 (56%), Gaps = 15/203 (7%) Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249 F S +LG++L+ F S+ T +Y+S F G P L+ I + +F P Sbjct: 31 FFLSILLGVILAFFTQTKSKVLQYITR-----VYVSFFR--GTPLLIQI---FFFYFGFP 80 Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309 ++ F+F+ SP ++++ I L ++A++AEI+R+ + +V +GQ EA A GL+ + Sbjct: 81 MI--FSFM--KDCSP-YLAIVICLGVNSSAYMAEIIRASIESVDKGQQEACYAFGLSKYQ 135 Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369 + ++LPQA S +PP+ S L+++K SSL + +G DL+ V + + EI +I Sbjct: 136 SMVKIILPQAATSAVPPIVSCTLDIIKGSSLGLTIGIQDLMGVAQVEAASSFKYFEIYMI 195 Query: 370 WMFIYLSLSIMIALFMNRLNAKI 392 + IY ++SI+++ +++ +I Sbjct: 196 TILIYWAVSIILSNIQSKVEKRI 218 >gi|152987622|ref|YP_001349398.1| ABC transporter permease [Pseudomonas aeruginosa PA7] gi|150962780|gb|ABR84805.1| probable permease of ABC transporter [Pseudomonas aeruginosa PA7] Length = 248 Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 50/129 (38%), Positives = 77/129 (59%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 ++S+ I L +TAA + E VR+G+ A+P GQ AA A+G + R VLLPQA R IIP Sbjct: 111 YLSVVICLGLFTAARVCEQVRTGIQALPYGQTSAARAMGFRLPQIYRHVLLPQAFRIIIP 170 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PLTS++LN+ KNSS+A +G +L++ + E + IY +L++ + L M Sbjct: 171 PLTSEFLNIFKNSSVASLIGLMELLAQTKQTAEFSANLFEAFTLATLIYFTLNMSLMLIM 230 Query: 386 NRLNAKIAL 394 + K+A+ Sbjct: 231 RLVERKVAV 239 Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust. Identities = 28/77 (36%), Positives = 41/77 (53%) Query: 81 SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140 +Y + G T ++ G I A +G+L+G R N+LV+ I YVE+FRN+P Sbjct: 17 GSETYLDWYIAGLGWTIAISLVGWIIALALGSLLGVMRTVPNRLVSGIATAYVELFRNVP 76 Query: 141 PLVVIFFLYKSVLSVLP 157 LV +F Y V +LP Sbjct: 77 LLVQLFIWYFLVPDLLP 93 >gi|259047073|ref|ZP_05737474.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein/permease protein [Granulicatella adiacens ATCC 49175] gi|259036123|gb|EEW37378.1| glutamine ABC superfamily ATP binding cassette transporter, binding protein/permease protein [Granulicatella adiacens ATCC 49175] Length = 478 Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 59/191 (30%), Positives = 103/191 (53%), Gaps = 29/191 (15%) Query: 191 VFSFVLGIVLSLFATRLSR------HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244 +F+ ++GI+ L T + F+ T + +PL+ ++ F+ FG+P I Sbjct: 293 IFASLIGIIFGLIKTSQNSIVQAIAGFYIDTIRGVPLIVLTFFIYFGIPQAFDI------ 346 Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304 T+ P F++ I LS +A+IAEI+R G+ AV +GQ EA ++LG Sbjct: 347 ----------------TMQP-FVAGVITLSLNASAYIAEIIRGGIQAVDKGQYEACMSLG 389 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364 L + K+ + V+LPQA+R ++P +Q++ LK++S+ +G A+L G II + Q+ Sbjct: 390 LPYSKSMQKVILPQAIRIMVPSFINQFVITLKDTSILSIIGIAELTQTGKVIIARNLQSS 449 Query: 365 EIILIWMFIYL 375 ++ LI +YL Sbjct: 450 QMWLIVGVMYL 460 Score = 40.0 bits (92), Expect = 0.57, Method: Compositional matrix adjust. Identities = 31/104 (29%), Positives = 51/104 (49%), Gaps = 16/104 (15%) Query: 60 GIGFLSERAGFEIDQGIVPYTS---DSSYATAIL-----------VGFVNTFWLAFSGMI 105 G+ L E + D+ I YT+ +++ AT+IL G NT L +I Sbjct: 236 GLKKLKESGKY--DEIINKYTTNANENTEATSILGLIKTNWKTLATGLWNTIVLTVVALI 293 Query: 106 PATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 A++IG + G + S N +V I Y++ R +P +V+ FF+Y Sbjct: 294 FASLIGIIFGLIKTSQNSIVQAIAGFYIDTIRGVPLIVLTFFIY 337 >gi|261251727|ref|ZP_05944301.1| amino acid ABC transporter permease protein [Vibrio orientalis CIP 102891] gi|260938600|gb|EEX94588.1| amino acid ABC transporter permease protein [Vibrio orientalis CIP 102891] Length = 263 Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 72/226 (31%), Positives = 117/226 (51%), Gaps = 21/226 (9%) Query: 158 IPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGK 217 +PD+ + G + L +T+ +A F+ ++G L+ A +LS + G+ Sbjct: 41 VPDYILFFEDGEWWPAELLDGLVVTIKISALSLCFTLLIG--LTTAALKLSDSW---VGR 95 Query: 218 ALPLLYISTFLIFGLPTLVLIALKYQLHFD-KPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 + LYI +I P LV I Y L+F PV+G F + +ALS + Sbjct: 96 GIANLYIE--VIRNTPLLVQI---YVLYFVFGPVIGL----------DRFATAVLALSLF 140 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 A+ AEI R GL ++P+ Q EAA +LGL V+LPQ ++ +PPLT++ ++L+K Sbjct: 141 QGAYTAEIFRGGLNSIPKEQFEAAKSLGLNPFYTFYDVILPQLLQRTLPPLTNEVISLIK 200 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382 NSS+ + DL + G I+++T EI IYLSL++M++ Sbjct: 201 NSSIVSVMAIFDLTTEGRNIVSETAMPFEIWFTVAAIYLSLTLMLS 246 >gi|149187232|ref|ZP_01865530.1| amino acid ABC transporter, permease protein [Vibrio shilonii AK1] gi|148838768|gb|EDL55707.1| amino acid ABC transporter, permease protein [Vibrio shilonii AK1] Length = 264 Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 67/236 (28%), Positives = 117/236 (49%), Gaps = 23/236 (9%) Query: 158 IPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGK 217 +PD+ G + L +T+ + VF+ + G++ +L T + G+ Sbjct: 43 VPDYLAFYEDGQWWPAELLEGLVVTLKISGLALVFTLLFGLITALLKTS-----NSVVGR 97 Query: 218 ALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT 277 + Y+ I P LV I L Y + P++G F + AL+ + Sbjct: 98 GIAHCYVEG--IRNTPLLVQIYLLYFVF--GPIIGL----------DRFSTAVFALALFQ 143 Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 A+ AEI+R+GL ++P+GQ EA ++GL+ V+LPQ +R +PPLT++ ++L+KN Sbjct: 144 GAYTAEILRAGLNSIPKGQFEACRSVGLSRFYTYYDVILPQVVRRTVPPLTNEIVSLIKN 203 Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIIL----IWMFIYLSLSIMIALFMNRLN 389 SS+ + DL + G I+++T EI I++ + L+LS + A +RLN Sbjct: 204 SSIVSVMAIFDLTTEGRNIVSETAMPFEIWFTVAAIYLVLTLTLSALSAWLEHRLN 259 >gi|325275177|ref|ZP_08141144.1| glutamate/aspartate ABC transporter permease [Pseudomonas sp. TJI-51] gi|324099664|gb|EGB97543.1| glutamate/aspartate ABC transporter permease [Pseudomonas sp. TJI-51] Length = 248 Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 50/128 (39%), Positives = 77/128 (60%) Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326 +S+ I L +TAA + E VR+G+ A+PRGQ AA A+G + + VLLPQA R IIPP Sbjct: 112 ISVVICLGLFTAARVCEQVRTGIQALPRGQESAARAMGFSLPQIYTNVLLPQAYRIIIPP 171 Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386 LTS++LN+ KNSS+A +G +L++ + E + IY +L++ + L M Sbjct: 172 LTSEFLNVFKNSSVASLIGLMELLAQTKQTAEFSANLFEAFTLATLIYFTLNMGLMLLMR 231 Query: 387 RLNAKIAL 394 + K+A+ Sbjct: 232 MVEKKVAV 239 Score = 42.7 bits (99), Expect = 0.088, Method: Compositional matrix adjust. Identities = 21/49 (42%), Positives = 33/49 (67%) Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLP 157 ++G+++G R N+LV+ I +YVE+FRN+P LV +F Y V +LP Sbjct: 45 LLGSVLGVMRTVPNRLVSGIATIYVELFRNVPLLVQLFIWYFLVPDLLP 93 >gi|68535732|ref|YP_250437.1| glutamate ABC transport system, permease protein [Corynebacterium jeikeium K411] gi|68263331|emb|CAI36819.1| glutamate ABC transport system, permease protein [Corynebacterium jeikeium K411] Length = 312 Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 46/127 (36%), Positives = 81/127 (63%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F ++ L+ Y + IAE +RSG+ ++PRGQ EAAIALGL+HR++ L+LLPQA+ +++P Sbjct: 142 FSAVVFGLTMYNGSVIAETLRSGIQSLPRGQREAAIALGLSHRQSINLILLPQAVAAMLP 201 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 + SQ + LK+S+L +GF ++V G + G I +L+ I + +++++A Sbjct: 202 AIISQMVIALKDSALGYMIGFVEVVRSGRQLGEYYGAMIPALLLIAVIMIVINMILAKLA 261 Query: 386 NRLNAKI 392 R+ ++ Sbjct: 262 ERIEIQL 268 Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 36/96 (37%), Positives = 56/96 (58%), Gaps = 3/96 (3%) Query: 64 LSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK 123 L+E+ FE + + S++ T I+ G ++T A ++ A IG L+G GRLS + Sbjct: 42 LNEKGQFESAKWSF-FLEGSTWTTYIIPGLISTIGAAVVSIVLAMAIGALLGVGRLSPSA 100 Query: 124 LVAWICRVYVEVFRNIPPLVVIFFLYK--SVLSVLP 157 V WIC + VE FR+IP LV++ F Y S+L ++P Sbjct: 101 PVRWICGIIVEFFRSIPVLVLMLFAYAVFSLLQLVP 136 >gi|260578183|ref|ZP_05846103.1| glutamate transport system permease protein GluD [Corynebacterium jeikeium ATCC 43734] gi|258603722|gb|EEW16979.1| glutamate transport system permease protein GluD [Corynebacterium jeikeium ATCC 43734] Length = 318 Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 46/127 (36%), Positives = 81/127 (63%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F ++ L+ Y + IAE +RSG+ ++PRGQ EAAIALGL+HR++ L+LLPQA+ +++P Sbjct: 148 FSAVVFGLTMYNGSVIAETLRSGIQSLPRGQREAAIALGLSHRQSINLILLPQAVAAMLP 207 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 + SQ + LK+S+L +GF ++V G + G I +L+ I + +++++A Sbjct: 208 AIISQMVIALKDSALGYMIGFVEVVRSGRQLGEYYGAMIPALLLIAVIMIVINMILAKLA 267 Query: 386 NRLNAKI 392 R+ ++ Sbjct: 268 ERIEIQL 274 Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 36/96 (37%), Positives = 56/96 (58%), Gaps = 3/96 (3%) Query: 64 LSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK 123 L+E+ FE + + S++ T I+ G ++T A ++ A IG L+G GRLS + Sbjct: 48 LNEKGQFESAKWSF-FLEGSTWTTYIIPGLISTIGAAVVSIVLAMAIGALLGVGRLSPSA 106 Query: 124 LVAWICRVYVEVFRNIPPLVVIFFLYK--SVLSVLP 157 V WIC + VE FR+IP LV++ F Y S+L ++P Sbjct: 107 PVRWICGIIVEFFRSIPVLVLMLFAYAVFSLLQLVP 142 >gi|297582812|ref|YP_003698592.1| polar amino acid ABC transporter inner membrane subunit [Bacillus selenitireducens MLS10] gi|297141269|gb|ADH98026.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus selenitireducens MLS10] Length = 227 Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 67/208 (32%), Positives = 111/208 (53%), Gaps = 20/208 (9%) Query: 189 IFVFSFVLGIVLSLFAT--RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246 I + S VLG+V+SLF R S H + + + YIS + G+P L+++ + L+F Sbjct: 32 ISLISMVLGLVMSLFLALARQSGHLYLQIPARM---YIS--FMRGVPILIIL---FMLYF 83 Query: 247 DKPVLG-QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305 P +G +F + + + F S AA++AEI RS + AVP+GQ EAA +LGL Sbjct: 84 GFPYIGIEFTAVNAAIIGFSFNS---------AAYMAEINRSAIDAVPKGQWEAARSLGL 134 Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365 ++ K R V+LPQA R +PPLT+ L+L+K SSLA + ++ + + + + Sbjct: 135 SYTKMMRQVVLPQASRIAVPPLTNVLLDLIKASSLAAMITVPEIFQMSRIVAGREMDYMT 194 Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIA 393 + ++ IY + ++ N L + A Sbjct: 195 MFILVAMIYWVICTLMTQLQNYLEKRFA 222 >gi|146310838|ref|YP_001175912.1| polar amino acid ABC transporter, inner membrane subunit [Enterobacter sp. 638] gi|145317714|gb|ABP59861.1| L-aspartate ABC transporter membrane protein / L-glutamate ABC transporter membrane protein [Enterobacter sp. 638] Length = 225 Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 43/127 (33%), Positives = 80/127 (62%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 +S +A S + AA+ +EI+R+G+ ++ RGQ AA+ALG+TH ++ +L++LPQA R+++ Sbjct: 96 RLISAMVAFSMFEAAYYSEIIRAGIQSISRGQSSAALALGMTHWQSMKLIILPQAFRAMV 155 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 P L +Q + L +++SL + AD TI + G +E+IL +Y ++S+ +L Sbjct: 156 PLLLTQGIVLFQDTSLVYVLSLADFFRTASTIGERDGTQVEMILFAGAVYFAISLSASLL 215 Query: 385 MNRLNAK 391 ++ L + Sbjct: 216 VSWLKKR 222 Score = 38.5 bits (88), Expect = 2.1, Method: Compositional matrix adjust. Identities = 25/70 (35%), Positives = 38/70 (54%), Gaps = 10/70 (14%) Query: 111 GTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY-------KSVLSVLPIPD--- 160 GT++ RLS+ K AW YV VFR+IP ++V+ + Y ++VL + P D Sbjct: 38 GTILAVMRLSSFKPFAWFATAYVNVFRSIPLVMVLLWFYLIVPGLLQNVLGLSPKADIRL 97 Query: 161 HSIVLPFGMF 170 S ++ F MF Sbjct: 98 ISAMVAFSMF 107 >gi|226314122|ref|YP_002774018.1| amino acid ABC transporter permease protein [Brevibacillus brevis NBRC 100599] gi|226097072|dbj|BAH45514.1| amino acid ABC transporter permease protein [Brevibacillus brevis NBRC 100599] Length = 229 Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 70/213 (32%), Positives = 114/213 (53%), Gaps = 19/213 (8%) Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240 LT+ A + V+G+V++ F R+S K + YI+ +I G P +V I + Sbjct: 19 LTVQLTAVALILGCVVGLVIAFF--RIS---DSKALNYIAHTYIT--VIRGTPLIVQICI 71 Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300 Y G N + T+S +F + IAL+ + A+IAEI R + ++ RGQMEA+ Sbjct: 72 LY--------FGLANMV---TLS-QFWAGAIALAVHNGAYIAEIFRGSIQSIDRGQMEAS 119 Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 +LG+++ A R ++LPQA R IP L +Q++ LK+SSL VG DL G Sbjct: 120 RSLGMSYPLAMRRIILPQAFRRAIPSLGNQFIIGLKDSSLVAYVGMQDLWGTGLGEAASN 179 Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393 + +E ++ YL L ++ + F+N+L A++A Sbjct: 180 YKQLETYMVVGLYYLVLIMIFSYFVNKLEARLA 212 >gi|190893811|ref|YP_001980353.1| putative amino acid ABC transporter, permease protein [Rhizobium etli CIAT 652] gi|190699090|gb|ACE93175.1| putative amino acid ABC transporter, permease protein [Rhizobium etli CIAT 652] Length = 271 Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 49/127 (38%), Positives = 81/127 (63%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IAL ++FIAEI R+G +V GQ+EAA +LGL+ + RLV+ PQA+R I PPL++ Sbjct: 145 IALMIGYSSFIAEIFRAGFQSVDIGQIEAAKSLGLSRYRRFRLVVFPQAIRVIFPPLSND 204 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 +++++K+SSL +G AD+ +G + + + E I +IYL L+I ++L + R+ Sbjct: 205 FVSMVKDSSLVSVLGVADITQMGKVYASGSFRFFETYSIVTYIYLILTIGLSLALRRIEK 264 Query: 391 KIALKEK 397 K+ K + Sbjct: 265 KMKQKPR 271 >gi|161525881|ref|YP_001580893.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia multivorans ATCC 17616] gi|160343310|gb|ABX16396.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia multivorans ATCC 17616] Length = 226 Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 42/108 (38%), Positives = 69/108 (63%) Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320 T+ S +A S + AA+ +EI+R+G+ AVPRGQ+ AA ALG+ + +A RLV+LPQA Sbjct: 93 TIDIRLASAMVAFSLFEAAYYSEIIRAGIQAVPRGQVNAAFALGMNYAQAMRLVILPQAF 152 Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368 R+++P L +Q + L +++SL + AD I ++ G +E++L Sbjct: 153 RAMVPLLLTQAIVLFQDTSLVYVISLADFFRTAANIGDRDGTTVEMVL 200 Score = 40.0 bits (92), Expect = 0.61, Method: Compositional matrix adjust. Identities = 23/65 (35%), Positives = 37/65 (56%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151 G + TF + ++ + GTL+ RLS K +AW + YV VFR+IP ++V+ + + Sbjct: 20 GAIVTFKITLIAIVVGIVWGTLLALMRLSGVKPLAWFAKAYVTVFRSIPLVMVLLWFFLI 79 Query: 152 VLSVL 156 V VL Sbjct: 80 VPQVL 84 >gi|206561693|ref|YP_002232458.1| glutamate/aspartate transport system permease [Burkholderia cenocepacia J2315] gi|198037735|emb|CAR53679.1| glutamate/aspartate transport system permease protein [Burkholderia cenocepacia J2315] Length = 225 Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 45/132 (34%), Positives = 77/132 (58%) Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320 T+ S +A S + AA+ +EI+R+G+ AVPRGQ+ AA ALG+ + +A RLV+LPQA Sbjct: 92 TIDIRLASAMVAFSLFEAAYYSEIIRAGIQAVPRGQVNAAFALGMNYAQAMRLVILPQAF 151 Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380 R+++P L +Q + L +++SL + AD I ++ G +E++L Y + + Sbjct: 152 RAMVPLLLTQAIVLFQDTSLVYVISLADFFRTAANIGDRDGTTVEMVLFAGACYFVICSL 211 Query: 381 IALFMNRLNAKI 392 + + L K+ Sbjct: 212 ASALVKGLQKKV 223 Score = 40.0 bits (92), Expect = 0.59, Method: Compositional matrix adjust. Identities = 24/65 (36%), Positives = 37/65 (56%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151 G V TF + ++ + GTL+ RLS K +AW + YV VFR+IP ++V+ + + Sbjct: 19 GAVVTFKITLIAIVVGIVWGTLLALLRLSGVKPLAWFAKAYVTVFRSIPLVMVLLWFFLI 78 Query: 152 VLSVL 156 V VL Sbjct: 79 VPQVL 83 >gi|291485151|dbj|BAI86226.1| glutamine ABC transporter, integral membrane protein [Bacillus subtilis subsp. natto BEST195] Length = 216 Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 46/122 (37%), Positives = 80/122 (65%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +AL+ YT+AFIAE +R+G+ +V +GQMEAA + G T+ +A ++LPQA++ ++PPL +Q Sbjct: 91 VALTIYTSAFIAEAIRAGIQSVSKGQMEAARSSGFTYSQAMLHIILPQAIKIVMPPLGNQ 150 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 +LNL+KNSS+ V DL+ + + T ++ + YL L+I +++ +N L Sbjct: 151 FLNLVKNSSILGVVAGLDLMYQADLVSSSTLVVFDVYIFVALFYLVLTIPLSIGVNYLEK 210 Query: 391 KI 392 ++ Sbjct: 211 RL 212 Score = 37.7 bits (86), Expect = 3.3, Method: Compositional matrix adjust. Identities = 19/58 (32%), Positives = 31/58 (53%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 GF +T + + + ++G V R++ K + W+ VYVE RNIP L++ F Y Sbjct: 16 GFYHTLLASVIALAGSFVLGVTVAVMRITVFKPLQWLGTVYVEFIRNIPLLLITFVFY 73 >gi|224824054|ref|ZP_03697162.1| polar amino acid ABC transporter, inner membrane subunit [Lutiella nitroferrum 2002] gi|224603473|gb|EEG09648.1| polar amino acid ABC transporter, inner membrane subunit [Lutiella nitroferrum 2002] Length = 264 Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 47/133 (35%), Positives = 79/133 (59%) Query: 260 STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319 S + ++S+ + L+ +TAA + E VR+G+ A+P+GQ AA+A+G + + R VLLPQA Sbjct: 123 SPTTSAYISVVVCLALFTAARVCEQVRTGIQALPKGQSHAALAMGFSRVQIYRHVLLPQA 182 Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379 R IIPPLT+++L + KNSS+A +G +L++ T E + IY L++ Sbjct: 183 FRIIIPPLTTEFLAIFKNSSVASLIGLMELLAQTKQTAEFTANIFEAFTLATVIYFVLNM 242 Query: 380 MIALFMNRLNAKI 392 + M R+ ++ Sbjct: 243 SLMKLMGRVEDRL 255 >gi|115351569|ref|YP_773408.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia ambifaria AMMD] gi|115281557|gb|ABI87074.1| amino acid ABC transporter membrane protein 1, PAAT family [Burkholderia ambifaria AMMD] Length = 240 Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 46/96 (47%), Positives = 65/96 (67%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 EF++ ++ LS YTAAF+AE +GL V Q +AA ALGLT ++ R V+LPQA+R + Sbjct: 106 EFVAGWVGLSAYTAAFVAEECEAGLRGVRGAQHDAAAALGLTPMQSLRYVVLPQAVRIAL 165 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 P L QY+NL+KNSSLA+A+G A+L + +T Sbjct: 166 PSLFGQYMNLVKNSSLAMAIGVAELSYASRQVETET 201 >gi|296158006|ref|ZP_06840839.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. Ch1-1] gi|295891774|gb|EFG71559.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. Ch1-1] Length = 222 Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 45/129 (34%), Positives = 83/129 (64%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P F+ + L Y+AA+++EIVR + +V RGQMEAA ++G++ +A R ++LPQA+ + Sbjct: 87 PAFVCGMLGLGLYSAAYVSEIVRGAIQSVDRGQMEAARSIGMSSGQAMRAIILPQAIVRM 146 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 IPPL ++++ L+KNS+L + DL+ G II+ + +++E+ L +YL L+ Sbjct: 147 IPPLGNEFIALIKNSALVSLLTIDDLMHEGQKIISVSYRSLEVYLAIALVYLVLTQATNY 206 Query: 384 FMNRLNAKI 392 ++R+ ++ Sbjct: 207 ALHRVERRL 215 >gi|206577118|ref|YP_002239698.1| glutamate/aspartate ABC transporter, permease protein GltK [Klebsiella pneumoniae 342] gi|288936540|ref|YP_003440599.1| polar amino acid ABC transporter inner membrane subunit [Klebsiella variicola At-22] gi|206566176|gb|ACI07952.1| glutamate/aspartate ABC transporter, permease protein GltK [Klebsiella pneumoniae 342] gi|288891249|gb|ADC59567.1| polar amino acid ABC transporter, inner membrane subunit [Klebsiella variicola At-22] Length = 224 Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 45/127 (35%), Positives = 79/127 (62%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 +S +A S + AA+ +EI+R+G+ ++ RGQ AA+ALG+TH ++ RLV+LPQA R+++ Sbjct: 96 RLISAMVAFSMFEAAYYSEIIRAGIQSISRGQSGAALALGMTHWQSMRLVILPQAFRAMV 155 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 P L +Q + L +++SL + AD TI + G +E+IL +Y +S+ +L Sbjct: 156 PLLLTQGIVLFQDTSLVYVLSLADFFRTASTIGERDGTQVEMILFAGGVYFVISLSASLL 215 Query: 385 MNRLNAK 391 ++ L + Sbjct: 216 VSWLKKR 222 Score = 40.0 bits (92), Expect = 0.65, Method: Compositional matrix adjust. Identities = 29/92 (31%), Positives = 48/92 (52%), Gaps = 10/92 (10%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G V T + ++ + GTL+ RLS+ +AW + YV VFR+IP ++V+ + Sbjct: 16 LLAGLVITLKITVIAIVVGIVWGTLLAVMRLSSFLPLAWFAKTYVNVFRSIPLVMVLLWF 75 Query: 149 Y-------KSVLSVLPIPD---HSIVLPFGMF 170 Y ++VL + P D S ++ F MF Sbjct: 76 YLIVPGFLQNVLGLSPKTDIRLISAMVAFSMF 107 >gi|170781633|ref|YP_001709965.1| putative glutamate permease [Clavibacter michiganensis subsp. sepedonicus] gi|169156201|emb|CAQ01343.1| putative glutamate permease [Clavibacter michiganensis subsp. sepedonicus] Length = 215 Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 50/138 (36%), Positives = 82/138 (59%), Gaps = 9/138 (6%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P + +AL+ YTA F AE +RSG+ +VP GQ EAA ++GLT + V+LPQA+R++ Sbjct: 82 PFMTAAVLALTLYTAPFFAEAIRSGINSVPVGQAEAARSIGLTFSQTLGSVILPQAVRTV 141 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI-----YLSLS 378 IPPL + + L KN+S+A A +L +VG + N G A+ +W+F+ YL ++ Sbjct: 142 IPPLINVVIALTKNTSIAGAYFIYELFNVGRDVANANGDAV----VWVFVGVAFFYLIIT 197 Query: 379 IMIALFMNRLNAKIALKE 396 + + + L ++A+ Sbjct: 198 VPLGQLADHLEKRVAVSR 215 >gi|90962414|ref|YP_536330.1| glutamine transport system permease protein [Lactobacillus salivarius UCC118] gi|90821608|gb|ABE00247.1| Glutamine transport system permease protein [Lactobacillus salivarius UCC118] Length = 217 Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 65/218 (29%), Positives = 112/218 (51%), Gaps = 31/218 (14%) Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPT 234 +T++ + V SF++G++L + ++ G + LPLL I F FGLP Sbjct: 22 VTLEVSVISIVLSFIIGLILGVIRYVKIKYLSAAVGFLIDIIRNLPLLLIIFFTYFGLPE 81 Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294 L G ++P ++ AL + +A +AEIVRSG+ AVP Sbjct: 82 L-----------------------GLRMTP-MLAAVTALVVFESAMLAEIVRSGIQAVPV 117 Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354 GQME A + GLT+ +A +++PQA++ +IPPL SQ+++L+K++SLA + +L+ Sbjct: 118 GQMEGARSSGLTYVQAMWHIIMPQALQKMIPPLVSQFISLVKDTSLATIIVLPELLYHAQ 177 Query: 355 TIINQ-TGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 I +Q T + + L+ +Y + ++L RL + Sbjct: 178 IIYSQNTTYMVPMYLMIAVMYFIVCYCLSLVARRLEKR 215 >gi|59801354|ref|YP_208066.1| putative ABC transporter, permease protein, amino acid [Neisseria gonorrhoeae FA 1090] gi|194098395|ref|YP_002001453.1| Amino acid ABC transporter, permease protein [Neisseria gonorrhoeae NCCP11945] gi|239998800|ref|ZP_04718724.1| Amino acid ABC transporter, permease protein [Neisseria gonorrhoeae 35/02] gi|240014284|ref|ZP_04721197.1| Amino acid ABC transporter, permease protein [Neisseria gonorrhoeae DGI18] gi|240016719|ref|ZP_04723259.1| Amino acid ABC transporter, permease protein [Neisseria gonorrhoeae FA6140] gi|240080912|ref|ZP_04725455.1| Amino acid ABC transporter, permease protein [Neisseria gonorrhoeae FA19] gi|240112729|ref|ZP_04727219.1| Amino acid ABC transporter, permease protein [Neisseria gonorrhoeae MS11] gi|240115477|ref|ZP_04729539.1| Amino acid ABC transporter, permease protein [Neisseria gonorrhoeae PID18] gi|240117771|ref|ZP_04731833.1| Amino acid ABC transporter, permease protein [Neisseria gonorrhoeae PID1] gi|240121847|ref|ZP_04734809.1| Amino acid ABC transporter, permease protein [Neisseria gonorrhoeae PID24-1] gi|240123327|ref|ZP_04736283.1| Amino acid ABC transporter, permease protein [Neisseria gonorrhoeae PID332] gi|240125576|ref|ZP_04738462.1| Amino acid ABC transporter, permease protein [Neisseria gonorrhoeae SK-92-679] gi|240128029|ref|ZP_04740690.1| Amino acid ABC transporter, permease protein [Neisseria gonorrhoeae SK-93-1035] gi|254493586|ref|ZP_05106757.1| binding-protein-dependent transport system inner membrane protein [Neisseria gonorrhoeae 1291] gi|260440713|ref|ZP_05794529.1| Amino acid ABC transporter, permease protein [Neisseria gonorrhoeae DGI2] gi|268594645|ref|ZP_06128812.1| amino acid ABC transporter [Neisseria gonorrhoeae 35/02] gi|268597029|ref|ZP_06131196.1| amino acid ABC transporter [Neisseria gonorrhoeae FA19] gi|268598794|ref|ZP_06132961.1| binding-protein-dependent transport system inner membrane protein [Neisseria gonorrhoeae MS11] gi|268601152|ref|ZP_06135319.1| binding-protein-dependent transport system inner membrane protein [Neisseria gonorrhoeae PID18] gi|268603471|ref|ZP_06137638.1| binding-protein-dependent transport system inner membrane protein [Neisseria gonorrhoeae PID1] gi|268681951|ref|ZP_06148813.1| binding-protein-dependent transport system inner membrane protein [Neisseria gonorrhoeae PID332] gi|268684165|ref|ZP_06151027.1| binding-protein-dependent transport system inner membrane protein [Neisseria gonorrhoeae SK-92-679] gi|268686419|ref|ZP_06153281.1| binding-protein-dependent transport system inner membrane protein [Neisseria gonorrhoeae SK-93-1035] gi|291044023|ref|ZP_06569739.1| amino acid ABC transporter [Neisseria gonorrhoeae DGI2] gi|293399215|ref|ZP_06643380.1| polar amino acid transport system permease [Neisseria gonorrhoeae F62] gi|59718249|gb|AAW89654.1| putative ABC transporter, permease protein, amino acid [Neisseria gonorrhoeae FA 1090] gi|193933685|gb|ACF29509.1| Amino acid ABC transporter, permease protein [Neisseria gonorrhoeae NCCP11945] gi|226512626|gb|EEH61971.1| binding-protein-dependent transport system inner membrane protein [Neisseria gonorrhoeae 1291] gi|268548034|gb|EEZ43452.1| amino acid ABC transporter [Neisseria gonorrhoeae 35/02] gi|268550817|gb|EEZ45836.1| amino acid ABC transporter [Neisseria gonorrhoeae FA19] gi|268582925|gb|EEZ47601.1| binding-protein-dependent transport system inner membrane protein [Neisseria gonorrhoeae MS11] gi|268585283|gb|EEZ49959.1| binding-protein-dependent transport system inner membrane protein [Neisseria gonorrhoeae PID18] gi|268587602|gb|EEZ52278.1| binding-protein-dependent transport system inner membrane protein [Neisseria gonorrhoeae PID1] gi|268622235|gb|EEZ54635.1| binding-protein-dependent transport system inner membrane protein [Neisseria gonorrhoeae PID332] gi|268624449|gb|EEZ56849.1| binding-protein-dependent transport system inner membrane protein [Neisseria gonorrhoeae SK-92-679] gi|268626703|gb|EEZ59103.1| binding-protein-dependent transport system inner membrane protein [Neisseria gonorrhoeae SK-93-1035] gi|291012486|gb|EFE04475.1| amino acid ABC transporter [Neisseria gonorrhoeae DGI2] gi|291610629|gb|EFF39739.1| polar amino acid transport system permease [Neisseria gonorrhoeae F62] gi|317164090|gb|ADV07631.1| putative ABC transporter, permease protein, amino acid [Neisseria gonorrhoeae TCDC-NG08107] Length = 248 Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 47/121 (38%), Positives = 74/121 (61%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +AL + A+I EI R+G+ ++ +GQMEAA +LGLT+ +A R V+LPQA+R ++PPL S+ Sbjct: 122 LALIANSGAYICEIFRAGIQSIDKGQMEAACSLGLTYPQAMRYVILPQALRRMLPPLASE 181 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++ LLK+SSL + A+L V TI + E + IYL ++ + RL Sbjct: 182 FITLLKDSSLLSVIAVAELAYVQNTITGRYSVYEEPLYTAALIYLLMTTFLGWIFLRLEK 241 Query: 391 K 391 + Sbjct: 242 R 242 >gi|302185658|ref|ZP_07262331.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. syringae 642] gi|330950013|gb|EGH50273.1| amino acid ABC transporter permease [Pseudomonas syringae Cit 7] Length = 248 Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 49/129 (37%), Positives = 77/129 (59%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+S+ + L +TAA + E VR+G+ A+P+GQ AA A+G + VLLPQA R IIP Sbjct: 111 FLSVVVCLGLFTAARVCEQVRTGIEALPKGQESAARAMGFKLPQIYWNVLLPQAYRIIIP 170 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PLTS++LN+ KNSS+A +G +L++ + E + IY +L++ + L M Sbjct: 171 PLTSEFLNVFKNSSVASLIGLMELLAQTKQTAEFSANLFEAFTLATLIYFTLNMSLMLLM 230 Query: 386 NRLNAKIAL 394 + K+A+ Sbjct: 231 RVIEKKVAV 239 Score = 43.5 bits (101), Expect = 0.059, Method: Compositional matrix adjust. Identities = 22/48 (45%), Positives = 32/48 (66%) Query: 110 IGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLP 157 +G+++G R N+LV+ I VYVE+FRN+P LV +F Y V +LP Sbjct: 46 LGSVLGVMRTVPNRLVSGIATVYVEIFRNVPLLVQLFIWYFLVPDLLP 93 >gi|298369218|ref|ZP_06980536.1| polar amino amino acid ABC transporter, PAAT family, permease protein [Neisseria sp. oral taxon 014 str. F0314] gi|298283221|gb|EFI24708.1| polar amino amino acid ABC transporter, PAAT family, permease protein [Neisseria sp. oral taxon 014 str. F0314] Length = 248 Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 47/121 (38%), Positives = 76/121 (62%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +AL + A+I+EI R+G+ ++ +GQMEAA +LGL +R+A R V+LPQA+R ++PPL S+ Sbjct: 122 LALIANSGAYISEIFRAGIQSIDKGQMEAARSLGLNYRQAMRYVVLPQALRRMLPPLASE 181 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++ LLK+SSL +G +L++V I + E + IYL L+ + RL Sbjct: 182 FITLLKDSSLLSVIGVVELLAVQKAISGRYSVYEEPLYTVALIYLVLTTCLGWMFLRLEN 241 Query: 391 K 391 + Sbjct: 242 R 242 >gi|270264105|ref|ZP_06192372.1| transporter [Serratia odorifera 4Rx13] gi|270041754|gb|EFA14851.1| transporter [Serratia odorifera 4Rx13] Length = 237 Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 45/96 (46%), Positives = 64/96 (66%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 EF++ + L+ Y+ AFIAE +RSG+ V GQ AA ALGLT +A R V+LPQA++ Sbjct: 105 EFLAGFFGLTLYSTAFIAEEIRSGIRGVAGGQKYAANALGLTGWQAMRYVVLPQALKIAF 164 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 PPL QY+N++KNSSL +A+G A+L + +T Sbjct: 165 PPLLGQYMNVIKNSSLTMAIGVAELSYASRQVETET 200 Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust. Identities = 24/66 (36%), Positives = 39/66 (59%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151 GF+ T WL+ + AT++G ++ A R S+ + + W+ Y +FRN P LV +FF Y + Sbjct: 18 GFLLTLWLSACASLAATLLGLILTAMRDSSLRPLRWLAVGYSSLFRNTPLLVQLFFWYFA 77 Query: 152 VLSVLP 157 +LP Sbjct: 78 AGQILP 83 >gi|302537786|ref|ZP_07290128.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces sp. C] gi|302446681|gb|EFL18497.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces sp. C] Length = 214 Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 47/111 (42%), Positives = 73/111 (65%), Gaps = 5/111 (4%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +AL CYT+AFI E +RSG+ VP+GQ EAA +LG++ + V+LPQA RS+IPP+ S Sbjct: 89 LALGCYTSAFICEALRSGINTVPKGQGEAARSLGMSFGQTLGTVVLPQAFRSVIPPIGST 148 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 + L KNS++A A +L+ T +N+ G +I IW F+++++ +I Sbjct: 149 LIALAKNSAIAGAFSVTELLGTYKT-LNELGYSI----IWTFVWIAVGYLI 194 >gi|152998036|ref|YP_001342871.1| polar amino acid ABC transporter inner membrane subunit [Marinomonas sp. MWYL1] gi|150838960|gb|ABR72936.1| polar amino acid ABC transporter, inner membrane subunit [Marinomonas sp. MWYL1] Length = 268 Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 66/215 (30%), Positives = 118/215 (54%), Gaps = 20/215 (9%) Query: 190 FVFSFVLGIVLSLFATRLSRH--------FHEKTGKALPLLYISTFLIF-GLPTLVLIAL 240 F+ + LG++++L SRH F+ + + +P+L + ++ F G P +V + Sbjct: 56 FILASFLGLLIAL--AGFSRHRILREFARFYVEVFRGIPVLVLLFYIAFVGAPEMVKL-- 111 Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLY---IALSCYTAAFIAEIVRSGLIAVPRGQM 297 Y P+ + +I + + +F L+ IAL+ +AFIAE+ R+G+ V +GQ+ Sbjct: 112 -YNWALQIPI--EAGWIEEAR-TRDFTLLWRAIIALAISYSAFIAEVFRAGIQEVGKGQI 167 Query: 298 EAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII 357 EAA ALGL++ RL+ LPQAMR I+PPL + + ++K+S+L +G D+ +G Sbjct: 168 EAAKALGLSNWHRFRLITLPQAMRKILPPLGNDLVAMIKDSALVSVLGVQDITQLGKVFS 227 Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 + T Q E + F+YL L++ ++L + A + Sbjct: 228 SSTFQFFETYNVVAFMYLVLTLSLSLMIRAFEAHL 262 Score = 44.7 bits (104), Expect = 0.026, Method: Compositional matrix adjust. Identities = 25/71 (35%), Positives = 41/71 (57%), Gaps = 3/71 (4%) Query: 81 SDSSY---ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137 +D SY A A+ G + T + F+ I A+ +G L+ S ++++ R YVEVFR Sbjct: 30 ADESYQRIAGALSEGLLTTIGVTFTAFILASFLGLLIALAGFSRHRILREFARFYVEVFR 89 Query: 138 NIPPLVVIFFL 148 IP LV++F++ Sbjct: 90 GIPVLVLLFYI 100 >gi|148545553|ref|YP_001265655.1| polar amino acid ABC transporter inner membrane subunit [Pseudomonas putida F1] gi|148509611|gb|ABQ76471.1| polar amino acid ABC transporter, inner membrane subunit [Pseudomonas putida F1] Length = 229 Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 69/205 (33%), Positives = 110/205 (53%), Gaps = 17/205 (8%) Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240 LT++ A V +L I L + R SRH++ + A+P YI F G P LV + L Sbjct: 19 LTLELVAIAVVAGLILAIPLGI--ARSSRHWYVR---AVPFSYI--FFFRGTPLLVQLFL 71 Query: 241 KYQLHFDKPVLGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296 Y L QF+ + S++ P F + ++ +TAA+IAEI+R L A+P+G+ Sbjct: 72 VYY------GLAQFDAVRSSSLWPYLRDPFWCTVLTMTLHTAAYIAEILRGALQAIPKGE 125 Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356 +EAA ALG++ K ++LP+A R +P +++ + +LK S+LA V +L + TI Sbjct: 126 IEAARALGMSRGKTLFYIMLPRAARIGLPAYSNEVILMLKASALASTVTLLELTGMARTI 185 Query: 357 INQTGQAIEIILIWMFIYLSLSIMI 381 I +T +EI YL +S M+ Sbjct: 186 IARTYLPVEIFFAAGVFYLVISFML 210 >gi|238761655|ref|ZP_04622630.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Yersinia kristensenii ATCC 33638] gi|238700169|gb|EEP92911.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Yersinia kristensenii ATCC 33638] Length = 255 Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 42/133 (31%), Positives = 80/133 (60%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+S +A++ A+++EI R+G+ ++ RGQMEA+ +LG+++ K R V+LPQA R ++P Sbjct: 122 FLSCIVAITLNAGAYVSEIFRAGIQSIDRGQMEASRSLGMSYGKTMRKVILPQAFRRMLP 181 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PL + + ++K+SSLA A+G ADL T+ E L+ +Y ++ +++L + Sbjct: 182 PLGNNAIAIVKDSSLASAIGLADLAYAARTVSGAYATYWEPYLVISVVYWVITFILSLLV 241 Query: 386 NRLNAKIALKEKK 398 + + + + Sbjct: 242 RHMETRFGKSDSR 254 >gi|226938963|ref|YP_002794034.1| Polar amino acid ABC transporter, inner membrane subunit [Laribacter hongkongensis HLHK9] gi|226713887|gb|ACO73025.1| Polar amino acid ABC transporter, inner membrane subunit [Laribacter hongkongensis HLHK9] Length = 219 Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 43/127 (33%), Positives = 77/127 (60%) Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327 S YI + + AA+ EI+R+G+ ++PRGQ+ A A+G T+ + R V+LPQA R+++P L Sbjct: 91 SAYITFAIFEAAYFCEIIRAGIQSIPRGQVFAGQAMGFTYGQNMRYVILPQAFRNVVPLL 150 Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387 +Q + L +++SL VG DL+ + N+ +E+ + IY +S ++ + R Sbjct: 151 LTQIIILFQDTSLVYVVGATDLLGAASKVANRDNTLVEMYVAVAVIYFVISFTLSRLVKR 210 Query: 388 LNAKIAL 394 L+ +IA+ Sbjct: 211 LHTRIAI 217 >gi|225375503|ref|ZP_03752724.1| hypothetical protein ROSEINA2194_01128 [Roseburia inulinivorans DSM 16841] gi|225212638|gb|EEG94992.1| hypothetical protein ROSEINA2194_01128 [Roseburia inulinivorans DSM 16841] Length = 414 Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 62/209 (29%), Positives = 115/209 (55%), Gaps = 24/209 (11%) Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTG-----KALPLLYISTFLIFGLPTLVLIALKYQ 243 I +F+ ++GIVL F + R H++ G A+ Y++ +I G P ++ + + Y Sbjct: 216 ITIFAVMIGIVLG-FLIAIVRTSHDRNGGLGILNAVCKAYLT--IIRGTPVMIQLLIIYY 272 Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 + F S + + + IA +AA++AEIVRSG++AV GQ EA +L Sbjct: 273 VIFQ------------SINTGKIVVAVIAFGLNSAAYVAEIVRSGIMAVDIGQFEAGRSL 320 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363 GL +R+ ++LPQA+++I+P L +++++LLK +S++ +G DL G I + T +A Sbjct: 321 GLNYRQTMTTIILPQAVKNILPALCNEFISLLKETSISGYIGLMDLTKGGDIIRSVTYEA 380 Query: 364 ----IEIILIWMFIYLSLSIMIALFMNRL 388 I + +I++ + + LS + + +L Sbjct: 381 FMPLIAVAVIYLLMVVGLSKAVGVLERKL 409 >gi|189349397|ref|YP_001945025.1| polar amino acid transporter permease [Burkholderia multivorans ATCC 17616] gi|221202315|ref|ZP_03575349.1| glutamate/aspartate ABC transporter, permease protein GltK [Burkholderia multivorans CGD2M] gi|221209129|ref|ZP_03582123.1| glutamate/aspartate ABC transporter, permease protein GltK [Burkholderia multivorans CGD2] gi|221214520|ref|ZP_03587491.1| glutamate/aspartate ABC transporter, permease protein GltK [Burkholderia multivorans CGD1] gi|189333419|dbj|BAG42489.1| polar amino acid transport system permease protein [Burkholderia multivorans ATCC 17616] gi|221165777|gb|EED98252.1| glutamate/aspartate ABC transporter, permease protein GltK [Burkholderia multivorans CGD1] gi|221171033|gb|EEE03486.1| glutamate/aspartate ABC transporter, permease protein GltK [Burkholderia multivorans CGD2] gi|221177889|gb|EEE10302.1| glutamate/aspartate ABC transporter, permease protein GltK [Burkholderia multivorans CGD2M] gi|325525015|gb|EGD02927.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia sp. TJI49] Length = 225 Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 42/108 (38%), Positives = 69/108 (63%) Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320 T+ S +A S + AA+ +EI+R+G+ AVPRGQ+ AA ALG+ + +A RLV+LPQA Sbjct: 92 TIDIRLASAMVAFSLFEAAYYSEIIRAGIQAVPRGQVNAAFALGMNYAQAMRLVILPQAF 151 Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368 R+++P L +Q + L +++SL + AD I ++ G +E++L Sbjct: 152 RAMVPLLLTQAIVLFQDTSLVYVISLADFFRTAANIGDRDGTTVEMVL 199 Score = 40.0 bits (92), Expect = 0.65, Method: Compositional matrix adjust. Identities = 23/65 (35%), Positives = 37/65 (56%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151 G + TF + ++ + GTL+ RLS K +AW + YV VFR+IP ++V+ + + Sbjct: 19 GAIVTFKITLIAIVVGIVWGTLLALMRLSGVKPLAWFAKAYVTVFRSIPLVMVLLWFFLI 78 Query: 152 VLSVL 156 V VL Sbjct: 79 VPQVL 83 >gi|330989514|gb|EGH87617.1| amino acid ABC transporter permease [Pseudomonas syringae pv. lachrymans str. M301315] Length = 248 Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 49/129 (37%), Positives = 77/129 (59%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+S+ + L +TAA + E VR+G+ A+P+GQ AA A+G + VLLPQA R IIP Sbjct: 111 FLSVVVCLGLFTAARVCEQVRTGIEALPKGQESAARAMGFKLPQIYWNVLLPQAYRIIIP 170 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PLTS++LN+ KNSS+A +G +L++ + E + IY +L++ + L M Sbjct: 171 PLTSEFLNVFKNSSVASLIGLMELLAQTKQTAEFSANLFEAFTLATLIYFTLNMSLMLLM 230 Query: 386 NRLNAKIAL 394 + K+A+ Sbjct: 231 RMIEKKVAV 239 Score = 45.4 bits (106), Expect = 0.015, Method: Compositional matrix adjust. Identities = 29/76 (38%), Positives = 42/76 (55%) Query: 82 DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141 +Y + G T +A I A I+G+++G R ++LV+ I VYVEVFRN+P Sbjct: 18 SETYLDWFISGLGWTIAIAVVAWIIALILGSVLGVMRTVPSRLVSGIATVYVEVFRNVPL 77 Query: 142 LVVIFFLYKSVLSVLP 157 LV +F Y V +LP Sbjct: 78 LVQLFIWYFLVPDLLP 93 >gi|66047136|ref|YP_236977.1| amino acid ABC transporter permease [Pseudomonas syringae pv. syringae B728a] gi|63257843|gb|AAY38939.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Pseudomonas syringae pv. syringae B728a] Length = 248 Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 49/129 (37%), Positives = 77/129 (59%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+S+ + L +TAA + E VR+G+ A+P+GQ AA A+G + VLLPQA R IIP Sbjct: 111 FLSVVVCLGLFTAARVCEQVRTGIEALPKGQESAARAMGFKLPQIYWNVLLPQAYRIIIP 170 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PLTS++LN+ KNSS+A +G +L++ + E + IY +L++ + L M Sbjct: 171 PLTSEFLNVFKNSSVASLIGLMELLAQTKQTAEFSANLFEAFTLATLIYFTLNMSLMLLM 230 Query: 386 NRLNAKIAL 394 + K+A+ Sbjct: 231 RAIEKKVAV 239 Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust. Identities = 29/76 (38%), Positives = 42/76 (55%) Query: 82 DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141 +Y + G T +A I A I+G+++G R N+LV+ I VYVE+FRN+P Sbjct: 18 SETYLDWFISGLGWTIAIAVVAWIIALILGSVLGVMRTVPNRLVSGIAAVYVEIFRNVPL 77 Query: 142 LVVIFFLYKSVLSVLP 157 LV +F Y V +LP Sbjct: 78 LVQLFIWYFLVPDLLP 93 >gi|291542753|emb|CBL15863.1| amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Ruminococcus bromii L2-63] Length = 508 Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 49/123 (39%), Positives = 80/123 (65%), Gaps = 4/123 (3%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IA +AA++AEIVRSG++AV GQ EA+ +LG +R+ +V+LPQA+++++P L ++ Sbjct: 382 IAFGMNSAAYVAEIVRSGIMAVDIGQTEASRSLGFNNRQTMTMVVLPQAIKNVLPALGNE 441 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA----IEIILIWMFIYLSLSIMIALFMN 386 + LLK +S+A V AD+ +G I ++T +A I + LI++ I L LS ++ F Sbjct: 442 IITLLKETSVAGYVALADITYIGNMIRSRTYEAFFPLITVALIYLVIVLVLSYILRRFER 501 Query: 387 RLN 389 RL Sbjct: 502 RLK 504 >gi|55821172|ref|YP_139614.1| polar amino acid ABC uptake transporter membrane-spanning protein [Streptococcus thermophilus LMG 18311] gi|55823085|ref|YP_141526.1| amino acid (glutamine) ABC transporter permease [Streptococcus thermophilus CNRZ1066] gi|55737157|gb|AAV60799.1| polar amino acid ABC uptake transporter membrane-spanning protein [Streptococcus thermophilus LMG 18311] gi|55739070|gb|AAV62711.1| amino acid (glutamine) ABC transporter permease protein [Streptococcus thermophilus CNRZ1066] Length = 232 Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 38/92 (41%), Positives = 66/92 (71%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G+ + P ++ + + YT A+I+EI+R+G+ AVP+GQ EAA++ G T+ R+++LPQ Sbjct: 95 GNVMIPTSLTAILCVGVYTGAYISEIIRTGIEAVPKGQTEAALSQGFTYADTMRIIILPQ 154 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 A+ +I+PPLT+Q +NL+KN+S + AD++ Sbjct: 155 AVHTILPPLTNQVVNLIKNTSTVAIISGADIM 186 Score = 42.0 bits (97), Expect = 0.19, Method: Compositional matrix adjust. Identities = 27/77 (35%), Positives = 46/77 (59%), Gaps = 7/77 (9%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV--VIFFLY 149 GF+ T ++ +I A ++G + GA + NK++ I RVYVE+F+N P LV V+ F Sbjct: 29 GFLYTLGISIGALIVALLLGLIFGAMSSTHNKVLRGISRVYVEIFQNTPLLVQFVVVFYG 88 Query: 150 KSVLSVLPIPDHSIVLP 166 S+L+ D ++++P Sbjct: 89 ISILT-----DGNVMIP 100 >gi|298488719|ref|ZP_07006748.1| glutamate/aspartate transport system permease protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298156792|gb|EFH97883.1| glutamate/aspartate transport system permease protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 248 Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 49/129 (37%), Positives = 77/129 (59%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+S+ + L +TAA + E VR+G+ A+P+GQ AA A+G + VLLPQA R IIP Sbjct: 111 FLSVVVCLGLFTAARVCEQVRTGIEALPKGQESAARAMGFKLPQIYWNVLLPQAYRLIIP 170 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PLTS++LN+ KNSS+A +G +L++ + E + IY +L++ + L M Sbjct: 171 PLTSEFLNVFKNSSVASLIGLMELLAQTKQTAEFSANLFEAFTLATLIYFTLNMSLMLLM 230 Query: 386 NRLNAKIAL 394 + K+A+ Sbjct: 231 RMIEKKVAV 239 Score = 45.1 bits (105), Expect = 0.021, Method: Compositional matrix adjust. Identities = 28/76 (36%), Positives = 42/76 (55%) Query: 82 DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141 +Y + G T +A I A I+G+++G R ++LV+ I VYVE+FRN+P Sbjct: 18 SETYLDWFISGLGWTIAIAVVAWIIALILGSVLGVMRTVPSRLVSGIATVYVEIFRNVPL 77 Query: 142 LVVIFFLYKSVLSVLP 157 LV +F Y V +LP Sbjct: 78 LVQLFIWYFLVPDLLP 93 >gi|187780209|ref|ZP_02996682.1| hypothetical protein CLOSPO_03805 [Clostridium sporogenes ATCC 15579] gi|187773834|gb|EDU37636.1| hypothetical protein CLOSPO_03805 [Clostridium sporogenes ATCC 15579] Length = 222 Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 58/177 (32%), Positives = 104/177 (58%), Gaps = 17/177 (9%) Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235 L + +T+ + + +LG++L++ + FH + +YIS F G P L Sbjct: 17 LKYAHITLSIAILSMIIAVLLGVILAVIRMYKVKIFHRISE-----IYISFFR--GTPIL 69 Query: 236 VLIALKYQLHFDKP-VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294 + + L Y + P ++ F I P +M++ IALS +A++AEI+R ++++ + Sbjct: 70 IQLFLFY---YGLPQIIPSFKEI------PAYMAVVIALSMNCSAYMAEIIRGAIMSIDK 120 Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 GQMEA+++LG+T +A + ++LPQA R IP L + +++LLK+SSLA VG A+++S Sbjct: 121 GQMEASLSLGMTEFQAMKRIILPQAARVAIPSLGNSFIDLLKSSSLAFTVGVAEILS 177 >gi|157145939|ref|YP_001453258.1| hypothetical protein CKO_01692 [Citrobacter koseri ATCC BAA-895] gi|157083144|gb|ABV12822.1| hypothetical protein CKO_01692 [Citrobacter koseri ATCC BAA-895] Length = 259 Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 49/128 (38%), Positives = 73/128 (57%) Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321 ++PEF+ L +T+AF+ E + SGL AV GQ EAA++ G + R +LLPQ + Sbjct: 109 LTPEFLCSAWGLGVFTSAFLVEEIASGLQAVSAGQREAAVSQGFSAWTTLRHILLPQGLA 168 Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 + P+ QYLNL+K SSLA +GFA+L I + A+E + +YL I++ Sbjct: 169 NAWQPIVGQYLNLMKLSSLASGIGFAELTYQVRQIESYNAHALEAFAVGTALYLLTGIVL 228 Query: 382 ALFMNRLN 389 L + RLN Sbjct: 229 GLLLTRLN 236 >gi|20807014|ref|NP_622185.1| ABC-type amino acid transport system, permease component [Thermoanaerobacter tengcongensis MB4] gi|20515499|gb|AAM23789.1| ABC-type amino acid transport system, permease component [Thermoanaerobacter tengcongensis MB4] Length = 220 Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 51/131 (38%), Positives = 83/131 (63%), Gaps = 4/131 (3%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P F + AL+ ++A++AEI+R+G+ AV GQ EAA +LG+TH A R V++PQA+++I Sbjct: 86 PAFTAGVSALAINSSAYVAEIIRAGIQAVDPGQNEAARSLGMTHAMAMRYVIIPQAIKNI 145 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY----LSLSI 379 +P L ++++ +LK S++ +GFADL I + T + E +I IY L+ S Sbjct: 146 LPALGNEFIVMLKESAIVSVIGFADLTRQADIIQSVTYRYFEPYIIIAAIYFVMTLTFSK 205 Query: 380 MIALFMNRLNA 390 +++LF RL A Sbjct: 206 LLSLFERRLRA 216 >gi|317407541|gb|EFV87491.1| ABC-type amino acid transport system [Achromobacter xylosoxidans C54] Length = 321 Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 60/171 (35%), Positives = 98/171 (57%), Gaps = 9/171 (5%) Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287 LI GLP L++L + P++ G T+ + IAL+ ++AA++AE++R Sbjct: 156 LIRGLP---LVSLLFMASIVLPIM----LPAGMTID-SLLRAGIALTVFSAAYLAEVIRG 207 Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347 GL A+P GQ EA+ ALGL+ + TRLV+LPQA+R +I PLT+ + ++KN+SL + VG Sbjct: 208 GLQAIPPGQAEASRALGLSWWQMTRLVVLPQALRKVIAPLTNTAIVMIKNTSLVLIVGLF 267 Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 DL+S G + + ++FI S+ I ++R + + + KK Sbjct: 268 DLLSSGRAALTDPAWPTPYVETYLFIA-SIYFCICFGLSRYSMWLEHRYKK 317 >gi|312970728|ref|ZP_07784909.1| amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Escherichia coli 1827-70] gi|310337377|gb|EFQ02515.1| amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Escherichia coli 1827-70] Length = 224 Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 44/129 (34%), Positives = 80/129 (62%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 +S +A S + AA+ +EI+R+G+ ++ GQ AA+ALG+TH ++ +L++LPQA R+++ Sbjct: 96 RLISAMVAFSMFEAAYYSEIIRAGIQSISLGQSSAALALGMTHWQSMKLIILPQAFRAMV 155 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 P L +Q + L +++SL + AD TI + G +E+IL F+Y +S+ +L Sbjct: 156 PLLLTQGIVLFQDTSLVYVLSLADFFRTASTIGERDGTQVEMILFAGFVYFVISLSASLL 215 Query: 385 MNRLNAKIA 393 ++ L + A Sbjct: 216 VSYLKRRTA 224 Score = 40.0 bits (92), Expect = 0.68, Method: Compositional matrix adjust. Identities = 28/92 (30%), Positives = 49/92 (53%), Gaps = 10/92 (10%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G V T + + ++ + GT++ RLS+ V+W + YV VFR+IP ++V+ + Sbjct: 16 LLDGLVITLKITVTAVVIGILWGTMLAVMRLSSFAPVSWFAKAYVNVFRSIPLVMVLLWF 75 Query: 149 Y-------KSVLSVLPIPD---HSIVLPFGMF 170 Y ++VL + P D S ++ F MF Sbjct: 76 YLIVPGFLQNVLGLSPKNDIRLISAMVAFSMF 107 >gi|254303824|ref|ZP_04971182.1| amino acid ABC superfamily ATP binding cassette transporter membrane protein [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] gi|148324016|gb|EDK89266.1| amino acid ABC superfamily ATP binding cassette transporter membrane protein [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] Length = 236 Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 47/147 (31%), Positives = 87/147 (59%) Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309 +L F+G +P + IA + A++AEI+R+G+ + +GQMEA ALGL++ + Sbjct: 90 ILANLIFVGVLRETPILVIGGIAFGLNSGAYVAEIIRAGIEGLDKGQMEAGRALGLSYSQ 149 Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369 R +++PQA+++I+P L S+++ LLK +S+ +G DL+ I +QT + +E +L Sbjct: 150 TMRKIIVPQAIKNILPALVSEFITLLKETSIIGFIGGVDLLRSASIITSQTYRGVEPLLA 209 Query: 370 WMFIYLSLSIMIALFMNRLNAKIALKE 396 IYL L+ + FM ++ + + + Sbjct: 210 VGIIYLILTSIFTAFMRKVERGLKVSD 236 >gi|330811360|ref|YP_004355822.1| Putative ABC transporter, permease component [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327379468|gb|AEA70818.1| Putative ABC transporter, permease component [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 248 Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 49/129 (37%), Positives = 77/129 (59%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 ++S+ + L +TAA + E VR+G+ A+PRGQ AA A+G + VLLPQA R IIP Sbjct: 111 YLSVVVCLGLFTAARVCEQVRTGIQALPRGQESAARAMGFKLPQIYWNVLLPQAYRIIIP 170 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PLTS++LN+ KNSS+A +G +L++ + E + IY +L++ + L M Sbjct: 171 PLTSEFLNVFKNSSVASLIGLMELLAQTKQTAEFSANLFEAFTLATLIYFTLNMSLMLLM 230 Query: 386 NRLNAKIAL 394 + K+A+ Sbjct: 231 RMVEKKVAV 239 Score = 43.9 bits (102), Expect = 0.042, Method: Compositional matrix adjust. Identities = 33/102 (32%), Positives = 48/102 (47%), Gaps = 12/102 (11%) Query: 56 NLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVG 115 N G+ F S G E +Y + G T +A I A ++G+++G Sbjct: 4 NWDWGVFFKSTGVGSE------------TYLDWYVTGLGWTIAIAVVAWIIALLLGSVLG 51 Query: 116 AGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLP 157 R N+LV+ I YVE+FRN+P LV +F Y V +LP Sbjct: 52 VMRTVPNRLVSGIATCYVELFRNVPLLVQLFIWYFLVPDLLP 93 >gi|256027814|ref|ZP_05441648.1| amino acid ABC transporter permease [Fusobacterium sp. D11] gi|289765767|ref|ZP_06525145.1| amino acid transport system permease [Fusobacterium sp. D11] gi|289717322|gb|EFD81334.1| amino acid transport system permease [Fusobacterium sp. D11] Length = 236 Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 47/147 (31%), Positives = 87/147 (59%) Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309 +L F+G +P + IA + A++AEI+R+G+ + +GQMEA ALGL++ + Sbjct: 90 ILANLIFVGALRETPILVIGGIAFGLNSGAYVAEIIRAGIEGLDKGQMEAGRALGLSYSQ 149 Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369 R +++PQA+++I+P L S+++ LLK +S+ +G DL+ I +QT + +E +L Sbjct: 150 TMRKIIVPQAIKNILPALVSEFIALLKETSIIGFIGGIDLLRSASIITSQTYRGVEPLLA 209 Query: 370 WMFIYLSLSIMIALFMNRLNAKIALKE 396 IYL L+ + FM ++ + + + Sbjct: 210 VGIIYLILTSIFTAFMRKVERGLKVSD 236 >gi|156932773|ref|YP_001436689.1| hypothetical protein ESA_00563 [Cronobacter sakazakii ATCC BAA-894] gi|156531027|gb|ABU75853.1| hypothetical protein ESA_00563 [Cronobacter sakazakii ATCC BAA-894] Length = 256 Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 45/133 (33%), Positives = 77/133 (57%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+S +A++ A+++EI R+G+ ++ RGQMEA+ ALG+ K R V+LPQA R I+P Sbjct: 124 FLSCIVAITLNAGAYVSEIFRAGIQSIDRGQMEASRALGMPWWKTMRKVILPQAFRRILP 183 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PL + + ++K+SSLA A+G ADL T+ E L +Y ++ +++ + Sbjct: 184 PLGNNAIAIVKDSSLASAIGLADLAYAARTVSGAYATYWEPYLTISLVYWVITFLLSQLV 243 Query: 386 NRLNAKIALKEKK 398 RL + + + Sbjct: 244 ARLEKRFGKSDSR 256 >gi|170724087|ref|YP_001751775.1| polar amino acid ABC transporter inner membrane subunit [Pseudomonas putida W619] gi|169762090|gb|ACA75406.1| polar amino acid ABC transporter, inner membrane subunit [Pseudomonas putida W619] Length = 229 Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 69/206 (33%), Positives = 111/206 (53%), Gaps = 17/206 (8%) Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239 TLT++ A V +L I L + R SRH++ + ALP YI F G P LV + Sbjct: 18 TLTLELVAIAVVAGLILAIPLGI--ARSSRHWYVR---ALPFSYI--FFFRGTPLLVQLF 70 Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295 L Y L QF+ + S++ P F + ++ +TAA+IAEI+R L ++P+G Sbjct: 71 LVYY------GLAQFDAVRSSSLWPYLRDPFWCTVLTMTLHTAAYIAEILRGALQSIPKG 124 Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355 ++EAA ALG++ K ++LP+A R +P +++ + +LK S+LA V +L + T Sbjct: 125 EIEAARALGMSRGKTLFYIMLPRAARIGLPAYSNEVILMLKASALASTVTLLELTGMART 184 Query: 356 IINQTGQAIEIILIWMFIYLSLSIMI 381 II +T +EI YL +S ++ Sbjct: 185 IIARTYLPVEIFFAAGVFYLVISFLL 210 >gi|70732198|ref|YP_261954.1| ABC transporter permease [Pseudomonas fluorescens Pf-5] gi|68346497|gb|AAY94103.1| probable permease of ABC transporter PA1340 [Pseudomonas fluorescens Pf-5] Length = 223 Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 52/178 (29%), Positives = 95/178 (53%), Gaps = 17/178 (9%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 +++PLL + T+ +P L++ D P+ F S +A + Sbjct: 63 RSIPLLLVITWFYLAVP----FVLRWITGEDTPI-------------GAFTSCIVAFMMF 105 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 AA+ EIVR+G+ ++P+GQM AA ALG+++ + RL++LPQA R + P L Q + L + Sbjct: 106 EAAYFCEIVRAGVQSIPKGQMGAAQALGMSYGQTMRLIILPQAFRKMTPLLLQQSIILFQ 165 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394 ++SL VG D ++ + + G++ E ++I +Y ++S +L + RL + A+ Sbjct: 166 DTSLVYTVGLVDFLNASRSSGDIIGRSNEFLIIAGLVYFTISFAASLLVKRLQKRFAV 223 Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust. Identities = 27/65 (41%), Positives = 39/65 (60%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151 G + T L G++ I+GTL+ RLS NKL++ + YV FR+IP L+VI + Y + Sbjct: 18 GMLMTLKLMVMGVVGGIILGTLLALMRLSHNKLLSNLAGAYVNYFRSIPLLLVITWFYLA 77 Query: 152 VLSVL 156 V VL Sbjct: 78 VPFVL 82 >gi|317402647|gb|EFV83205.1| amino acids ABC transporter [Achromobacter xylosoxidans C54] Length = 233 Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 62/159 (38%), Positives = 87/159 (54%), Gaps = 14/159 (8%) Query: 237 LIALKYQLHFDKPVLGQ--FNFIGGSTVSP------------EFMSLYIALSCYTAAFIA 282 LIAL H + P+L F + G + P EF+ IA+ +A++ Sbjct: 58 LIALYVAFHRNVPMLVHILFWYFGVPALLPQVATDWLNTHGSEFILSCIAIGLVMSAYVC 117 Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342 E +RS + +P GQ+EAA ALGL + R V+LPQA R IPPL +Q L L+KN+SLA+ Sbjct: 118 EDLRSAVRGIPPGQVEAARALGLGFLRTMRCVVLPQAFRIAIPPLLNQTLLLVKNTSLAM 177 Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 A+G A+L + G I N T + E + IYL LS +I Sbjct: 178 AIGVAELTAAGREIENYTFRTFEAYAVVTAIYLLLSFLI 216 Score = 39.7 bits (91), Expect = 0.87, Method: Compositional matrix adjust. Identities = 26/76 (34%), Positives = 39/76 (51%) Query: 82 DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141 Y +L G V T LA I A ++G+L+ RL+ + + + +YV RN+P Sbjct: 12 QGEYPAWLLRGLVTTLALAGLAWILAFLVGSLLAVIRLTGSPVANALIALYVAFHRNVPM 71 Query: 142 LVVIFFLYKSVLSVLP 157 LV I F Y V ++LP Sbjct: 72 LVHILFWYFGVPALLP 87 >gi|104773643|ref|YP_618623.1| glutamine ABC transporter, permease protein [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|103422724|emb|CAI97351.1| Glutamine ABC transporter, permease protein [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] Length = 222 Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 69/213 (32%), Positives = 115/213 (53%), Gaps = 15/213 (7%) Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240 +T++ + + SFV+G+ L L R +R KT + ++ + +I LP L++I Sbjct: 22 VTIEVSVISIILSFVIGLALGLI--RFTR-IDAKTTRISKVVGVIIDIIRNLPLLLIIFF 78 Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300 Y F PV+G F + IA+ + +A IAE+VRSG++AV GQME A Sbjct: 79 SY---FGLPVMG--------IRVDAFQASVIAMVVFESAMIAEVVRSGIMAVDPGQMEGA 127 Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ- 359 + G+T+ +A V+LPQA+ +IP L SQ+++L+K++SLA + +L+ I NQ Sbjct: 128 RSNGMTYMQAMTHVVLPQALSKMIPALLSQFVSLIKDTSLATIIVLPELLYHAEIIYNQN 187 Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 T I + L +Y + ++ F N L+ +I Sbjct: 188 TNYMIPMYLAVAVMYFIICFALSSFANYLSKRI 220 >gi|260599090|ref|YP_003211661.1| hypothetical protein CTU_32980 [Cronobacter turicensis z3032] gi|260218267|emb|CBA33210.1| hypothetical protein CTU_32980 [Cronobacter turicensis z3032] Length = 268 Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 45/133 (33%), Positives = 77/133 (57%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+S +A++ A+++EI R+G+ ++ RGQMEA+ ALG+ K R V+LPQA R I+P Sbjct: 136 FLSCIVAITLNAGAYVSEIFRAGIQSIDRGQMEASRALGMPWWKTMRKVILPQAFRRILP 195 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PL + + ++K+SSLA A+G ADL T+ E L +Y ++ +++ + Sbjct: 196 PLGNNAIAIVKDSSLASAIGLADLAYAARTVSGAYATYWEPYLTISLVYWVITFLLSQLV 255 Query: 386 NRLNAKIALKEKK 398 RL + + + Sbjct: 256 ARLEKRFGKSDSR 268 >gi|296126896|ref|YP_003634148.1| polar amino acid ABC transporter, inner membrane subunit [Brachyspira murdochii DSM 12563] gi|296018712|gb|ADG71949.1| polar amino acid ABC transporter, inner membrane subunit [Brachyspira murdochii DSM 12563] Length = 237 Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 69/225 (30%), Positives = 121/225 (53%), Gaps = 26/225 (11%) Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKAL----PL-----LYI 224 +GL F ++ T A V VLGI ++L +LS + K K PL LY+ Sbjct: 23 KGLIF---SVGTTALATVIGIVLGIFIALL--QLSEFYPFKNSKKFSNFNPLSKIAFLYV 77 Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284 + ++ G P +V QL V+ F+ +P + IA + A++AEI Sbjct: 78 N--ILRGTPVVV------QLMIWANVV----FVDSLRDTPILIIAAIAFGINSGAYVAEI 125 Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344 +R+G+ ++ +GQMEAA ALG+ + + + +++PQA++ I+PPL S+++ LLK +S+ + Sbjct: 126 IRAGIQSLDKGQMEAARALGMNYSLSMKEIIIPQAIKKILPPLVSEFIALLKETSVVGFI 185 Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 G DL+ I +QT + +E ++ IY L+ + A+FM ++ Sbjct: 186 GGVDLLRSANIITSQTYRGVEPLIAVGIIYFILTSIFAMFMRKVE 230 >gi|121608572|ref|YP_996379.1| polar amino acid ABC transporter inner membrane subunit [Verminephrobacter eiseniae EF01-2] gi|121553212|gb|ABM57361.1| polar amino acid ABC transporter, inner membrane subunit [Verminephrobacter eiseniae EF01-2] Length = 260 Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 61/157 (38%), Positives = 90/157 (57%), Gaps = 12/157 (7%) Query: 214 KTGKALPLLYISTFLIF---GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY 270 +T + + L +++ F I+ G P LV I Y F P+L + G + P+F + Sbjct: 81 RTSRWMVLRWVAGFYIWVIRGTPLLVQILFVY---FALPIL-----VPGLNL-PDFAAAV 131 Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +AL A+ AE VR+GL+AVPRGQ EAA ALGL V+ PQA R +PPL + Sbjct: 132 LALGLNVGAYNAEAVRAGLLAVPRGQTEAAKALGLGRLHVIADVVFPQAFRIALPPLVNN 191 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367 ++ LLK+SSLA A+G +L +VG I + T Q++ + Sbjct: 192 FVALLKDSSLAYAIGVVELTNVGYRIQSVTFQSVATL 228 >gi|91785180|ref|YP_560386.1| His/Glu/Gln/Arg/opine ABC transporter inner membrane protein [Burkholderia xenovorans LB400] gi|91689134|gb|ABE32334.1| L-glutamate ABC transporter membrane protein / L-aspartate ABC transporter membrane protein [Burkholderia xenovorans LB400] Length = 225 Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 45/126 (35%), Positives = 77/126 (61%) Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327 S +A S + AA+ +EI+R+G+ AVPRGQ+ AA ALG+ + +A RL++LPQA R+++P L Sbjct: 99 SAMVAFSLFEAAYYSEIIRAGIQAVPRGQVNAAFALGMNYAQAMRLIVLPQAFRAMVPLL 158 Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387 +Q + L +++SL + AD I ++ G IE++L Y + ++ + + Sbjct: 159 LTQGIVLFQDTSLVYVISLADFFRTATNIGDRDGTNIEMVLFAGACYFVVCVIASSLVKG 218 Query: 388 LNAKIA 393 L K+A Sbjct: 219 LQKKVA 224 >gi|163848773|ref|YP_001636817.1| polar amino acid ABC transporter inner membrane subunit [Chloroflexus aurantiacus J-10-fl] gi|222526723|ref|YP_002571194.1| polar amino acid ABC transporter inner membrane subunit [Chloroflexus sp. Y-400-fl] gi|163670062|gb|ABY36428.1| polar amino acid ABC transporter, inner membrane subunit [Chloroflexus aurantiacus J-10-fl] gi|222450602|gb|ACM54868.1| polar amino acid ABC transporter, inner membrane subunit [Chloroflexus sp. Y-400-fl] Length = 410 Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 68/210 (32%), Positives = 108/210 (51%), Gaps = 22/210 (10%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 V SF LG++L+L R + +LYI LI G+P L+ + + P+ Sbjct: 212 VLSFPLGVLLAL-----GRRSSLPVIRVFCVLYIE--LIRGVP---LVTVLFMGALLLPL 261 Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 FI G + +A++ ++AA++AE VR GL ++P+GQ+EAA ALGL + Sbjct: 262 -----FIPGGESIDALVRAIVAVTLFSAAYLAENVRGGLQSIPKGQIEAARALGLNVFQT 316 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT-------GQA 363 T L+ LPQA+R+++P L Q++ L K++SL V +G DL+ I+ Q G Sbjct: 317 TLLITLPQALRAVVPVLVGQFIALFKDTSLVVIIGLVDLLGAAQNIVGQPQWLGTPGGVW 376 Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIA 393 E L+ IY S ++ R+ +IA Sbjct: 377 RETFLVIAAIYWVFSFTMSRISKRIEDQIA 406 >gi|71736319|ref|YP_276040.1| amino acid ABC transporter permease [Pseudomonas syringae pv. phaseolicola 1448A] gi|257486608|ref|ZP_05640649.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tabaci ATCC 11528] gi|71556872|gb|AAZ36083.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. phaseolicola 1448A] gi|320327103|gb|EFW83117.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. glycinea str. race 4] gi|330879087|gb|EGH13236.1| amino acid ABC transporter permease [Pseudomonas syringae pv. glycinea str. race 4] gi|331010091|gb|EGH90147.1| amino acid ABC transporter permease [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 248 Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 49/129 (37%), Positives = 77/129 (59%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+S+ + L +TAA + E VR+G+ A+P+GQ AA A+G + VLLPQA R IIP Sbjct: 111 FLSVVVCLGLFTAARVCEQVRTGIEALPKGQESAARAMGFKLPQIYWNVLLPQAYRIIIP 170 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PLTS++LN+ KNSS+A +G +L++ + E + IY +L++ + L M Sbjct: 171 PLTSEFLNVFKNSSVASLIGLMELLAQTKQTAEFSANLFEAFTLATLIYFTLNMSLMLLM 230 Query: 386 NRLNAKIAL 394 + K+A+ Sbjct: 231 RMIEKKVAV 239 Score = 45.1 bits (105), Expect = 0.022, Method: Compositional matrix adjust. Identities = 28/76 (36%), Positives = 42/76 (55%) Query: 82 DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141 +Y + G T +A I A I+G+++G R ++LV+ I VYVE+FRN+P Sbjct: 18 SETYLDWFISGLGWTIAIAVVAWIIALILGSVLGVMRTVPSRLVSGIATVYVEIFRNVPL 77 Query: 142 LVVIFFLYKSVLSVLP 157 LV +F Y V +LP Sbjct: 78 LVQLFIWYFLVPDLLP 93 >gi|239909115|ref|YP_002955857.1| amino acid ABC transporter permease protein [Desulfovibrio magneticus RS-1] gi|239798982|dbj|BAH77971.1| amino acid ABC transporter permease protein [Desulfovibrio magneticus RS-1] Length = 231 Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 59/166 (35%), Positives = 96/166 (57%), Gaps = 11/166 (6%) Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287 +I G P L+++ + +F PV + G T+ PE S IAL +T+A+IAEIVR+ Sbjct: 68 IIRGTPLLMVV---FWFYFLAPV------VFGHTL-PEAESALIALIVFTSAYIAEIVRA 117 Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347 G+ A+P+GQMEAA GL+H +A ++LPQA+ ++IP +Q+++L K++SLA +G Sbjct: 118 GVEALPKGQMEAARGTGLSHFQAMTHIILPQALFNMIPSFVNQFVSLTKDTSLAFIIGVN 177 Query: 348 DLVSVGGTIINQTGQA-IEIILIWMFIYLSLSIMIALFMNRLNAKI 392 +L + N+T A EI + +Y + + F L +I Sbjct: 178 ELTKAATQVNNRTLTAPTEIFITIAVLYFVICYCLTEFSRYLERRI 223 >gi|121608199|ref|YP_996006.1| polar amino acid ABC transporter inner membrane subunit [Verminephrobacter eiseniae EF01-2] gi|121552839|gb|ABM56988.1| polar amino acid ABC transporter, inner membrane subunit [Verminephrobacter eiseniae EF01-2] Length = 251 Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 53/126 (42%), Positives = 76/126 (60%), Gaps = 4/126 (3%) Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322 +P F + +AL +T+A IAE VR+G+ +P GQ A +A+G T + R VLLP A R Sbjct: 108 APGFALVVLALGFFTSARIAEQVRAGIQTLPSGQRYAGLAMGFTTLQTYRYVLLPMAFRI 167 Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382 IIPPLTS+ +N+ KNSS+A AV A+L +T + IE+ L +L I+ A Sbjct: 168 IIPPLTSEMMNIFKNSSVAFAVSVAELTMFAMQAQEETARGIEVYL----AVTALYIISA 223 Query: 383 LFMNRL 388 L +NR+ Sbjct: 224 LIINRI 229 >gi|148273186|ref|YP_001222747.1| putative glutamate ABC transporter, permease [Clavibacter michiganensis subsp. michiganensis NCPPB 382] gi|147831116|emb|CAN02068.1| putative glutamate ABC transpoter, permease component [Clavibacter michiganensis subsp. michiganensis NCPPB 382] Length = 215 Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 50/138 (36%), Positives = 82/138 (59%), Gaps = 9/138 (6%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P + +AL+ YTA F AE +RSG+ +VP GQ EAA ++GLT + V+LPQA+R++ Sbjct: 82 PFMTAAVLALTLYTAPFFAEAIRSGINSVPVGQAEAARSIGLTFSQTLGSVILPQAVRTV 141 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI-----YLSLS 378 IPPL + + L KN+S+A A +L +VG + N G A+ +W+F+ YL ++ Sbjct: 142 IPPLINVVIALTKNTSIAGAYFIYELFNVGRDVANANGNAV----VWVFVGVAFFYLIIT 197 Query: 379 IMIALFMNRLNAKIALKE 396 + + + L ++A+ Sbjct: 198 VPLGQLADHLEKRVAVSR 215 >gi|120612709|ref|YP_972387.1| polar amino acid ABC transporter inner membrane subunit [Acidovorax citrulli AAC00-1] gi|120591173|gb|ABM34613.1| amino acid ABC transporter membrane protein 1, PAAT family [Acidovorax citrulli AAC00-1] Length = 243 Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 55/132 (41%), Positives = 78/132 (59%), Gaps = 4/132 (3%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+ + +AL +T+A IAE VRSG+ A+PRGQ A +ALG T + R VLLP A R I+P Sbjct: 102 FILVVLALGFFTSARIAEQVRSGIQALPRGQRYAGMALGFTTVQYYRYVLLPMAFRIILP 161 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PLTS+ +N+ KNSS+A AV +L +T + IEI L L ++ A + Sbjct: 162 PLTSETMNIFKNSSVAFAVSVTELTMFAMQAQEETSRGIEIYL----AVTGLYVVSAFAI 217 Query: 386 NRLNAKIALKEK 397 NR+ A I + + Sbjct: 218 NRIMAFIEKRAR 229 Score = 38.5 bits (88), Expect = 1.7, Method: Compositional matrix adjust. Identities = 30/103 (29%), Positives = 49/103 (47%), Gaps = 6/103 (5%) Query: 78 PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGR-LSANKLVAWICRVYVEVF 136 P +Y +L + T +A ++ A + G+++G R L N+ + +VE+F Sbjct: 14 PGGDYPTYLQWMLSAWGWTVSVALLALVIALVAGSVIGTLRTLPDNRFLVGFGNAWVELF 73 Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHS-----IVLPFGMFLNNR 174 RNIP LV IF Y V ++ P+ +VL G F + R Sbjct: 74 RNIPLLVQIFLWYHVVPAIFPVMKSVSGFILVVLALGFFTSAR 116 >gi|330889550|gb|EGH22211.1| amino acid ABC transporter permease [Pseudomonas syringae pv. mori str. 301020] Length = 248 Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 49/129 (37%), Positives = 77/129 (59%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+S+ + L +TAA + E VR+G+ A+P+GQ AA A+G + VLLPQA R IIP Sbjct: 111 FLSVVVCLGLFTAARVCEQVRTGIEALPKGQESAARAMGFKLPQIYWNVLLPQAYRIIIP 170 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PLTS++LN+ KNSS+A +G +L++ + E + IY +L++ + L M Sbjct: 171 PLTSEFLNVFKNSSVASLIGLMELLAQTKQTAEFSANLFEAFTLATLIYFTLNMSLMLLM 230 Query: 386 NRLNAKIAL 394 + K+A+ Sbjct: 231 RMIEKKVAV 239 Score = 42.7 bits (99), Expect = 0.10, Method: Compositional matrix adjust. Identities = 27/76 (35%), Positives = 41/76 (53%) Query: 82 DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141 +Y + G T +A I A I+G+++G R ++LV+ I VYVE+FRN+P Sbjct: 18 SETYLDWFISGLGWTIAIAVVAWIIALILGSVLGVMRTVPSRLVSGIATVYVEIFRNVPL 77 Query: 142 LVVIFFLYKSVLSVLP 157 LV + Y V +LP Sbjct: 78 LVQLLIWYFLVPDLLP 93 >gi|323142729|ref|ZP_08077445.1| putative glutamine ABC transporter permease protein GlnM [Succinatimonas hippei YIT 12066] gi|322417480|gb|EFY08098.1| putative glutamine ABC transporter permease protein GlnM [Succinatimonas hippei YIT 12066] Length = 222 Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 71/246 (28%), Positives = 123/246 (50%), Gaps = 45/246 (18%) Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFV------FSFVLGIVLSLFATRLSRHFHEKTG---- 216 F +F++ FP L M A + + F+F++G++L+L LSR+ K Sbjct: 5 FSLFID----CFPDLMMGLGATLLIAVVSMFFAFIIGMILALMG--LSRYKGLKAIYYSY 58 Query: 217 ----KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIA 272 + +P+L + FL FG+ L+ I QFN I ++ Sbjct: 59 VAFIRGVPVLIFALFLFFGVGGLLNI--------------QFNPIVAGIIT--------- 95 Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 LS +AF+AEI R G++AV +GQ+EAA +LG + + R ++LPQA+R ++PPL +Q++ Sbjct: 96 LSINASAFLAEIFRGGILAVDKGQIEAARSLGFGYFRTMRYIVLPQALRIMVPPLVNQFI 155 Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 + LK++S+ + +L II + + E+ FIY + ++IA+ + K Sbjct: 156 STLKDTSILSVISVRELTMNSQIIIARNFRPFEVYSYAAFIYFLVILLIAIAAKYIEKK- 214 Query: 393 ALKEKK 398 + E K Sbjct: 215 -MNESK 219 >gi|237744915|ref|ZP_04575396.1| amino acid transport system permease [Fusobacterium sp. 7_1] gi|260494696|ref|ZP_05814826.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Fusobacterium sp. 3_1_33] gi|229432144|gb|EEO42356.1| amino acid transport system permease [Fusobacterium sp. 7_1] gi|260197858|gb|EEW95375.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Fusobacterium sp. 3_1_33] Length = 236 Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 47/147 (31%), Positives = 87/147 (59%) Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309 +L F+G +P + IA + A++AEI+R+G+ + +GQMEA ALGL++ + Sbjct: 90 ILANLIFVGALRETPILVIGGIAFGLNSGAYVAEIIRAGIEGLDKGQMEAGRALGLSYSQ 149 Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369 R +++PQA+++I+P L S+++ LLK +S+ +G DL+ I +QT + +E +L Sbjct: 150 TMRKIIVPQAIKNILPALVSEFIALLKETSIIGFIGGIDLLRSASIITSQTYRGVEPLLA 209 Query: 370 WMFIYLSLSIMIALFMNRLNAKIALKE 396 IYL L+ + FM ++ + + + Sbjct: 210 VGIIYLILTSIFTAFMRKVERGLKVSD 236 >gi|126698331|ref|YP_001087228.1| amino acid ABC transporter permease [Clostridium difficile 630] gi|254974369|ref|ZP_05270841.1| amino acid ABC transporter, permease protein [Clostridium difficile QCD-66c26] gi|255091763|ref|ZP_05321241.1| amino acid ABC transporter, permease protein [Clostridium difficile CIP 107932] gi|255099867|ref|ZP_05328844.1| amino acid ABC transporter, permease protein [Clostridium difficile QCD-63q42] gi|255305755|ref|ZP_05349927.1| amino acid ABC transporter, permease protein [Clostridium difficile ATCC 43255] gi|255313493|ref|ZP_05355076.1| amino acid ABC transporter, permease protein [Clostridium difficile QCD-76w55] gi|255516181|ref|ZP_05383857.1| amino acid ABC transporter, permease protein [Clostridium difficile QCD-97b34] gi|255649277|ref|ZP_05396179.1| amino acid ABC transporter, permease protein [Clostridium difficile QCD-37x79] gi|255654801|ref|ZP_05400210.1| amino acid ABC transporter, permease protein [Clostridium difficile QCD-23m63] gi|260682448|ref|YP_003213733.1| amino acid ABC transporter permease [Clostridium difficile CD196] gi|260686047|ref|YP_003217180.1| amino acid ABC transporter permease [Clostridium difficile R20291] gi|306519377|ref|ZP_07405724.1| amino acid ABC transporter, permease protein [Clostridium difficile QCD-32g58] gi|115249768|emb|CAJ67585.1| ABC-type transport system, aminoacid-family permease [Clostridium difficile] gi|260208611|emb|CBA61332.1| amino acid ABC transporter, permease protein [Clostridium difficile CD196] gi|260212063|emb|CBE02647.1| amino acid ABC transporter, permease protein [Clostridium difficile R20291] Length = 225 Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 56/185 (30%), Positives = 107/185 (57%), Gaps = 8/185 (4%) Query: 212 HEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG-QFNFIGGSTVSPEFMSLY 270 K +A+ +YI ++ G P LV I Y + F P LG +F + G + EF++ Sbjct: 47 KSKVLRAISSIYIE--VLRGTPLLVQI---YIVWFGLPQLGIRFPMLFG--IPSEFIASA 99 Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 ALS + A++AEI+RSG+ +V GQMEA+ +LGL + R +++PQA+++I+P L ++ Sbjct: 100 FALSVNSGAYVAEILRSGIQSVDNGQMEASRSLGLNYWSTMRYIIIPQAIKNILPSLANE 159 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++ L+K SS+ +G +++ + N +A+E +++ IY ++ ++ + L Sbjct: 160 FITLVKESSIISVIGVVEIMRTADIVKNAAFRALEPLIVAAAIYFVITFTLSRLVGLLEK 219 Query: 391 KIALK 395 K+++ Sbjct: 220 KLSVS 224 >gi|241895819|ref|ZP_04783115.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Weissella paramesenteroides ATCC 33313] gi|241870862|gb|EER74613.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Weissella paramesenteroides ATCC 33313] Length = 217 Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 47/121 (38%), Positives = 75/121 (61%) Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 L+ YT+AFIAE VR+G+ AVP+GQ+E A++ GL+ + R ++LPQA + +IPPL +Q+ Sbjct: 90 GLTLYTSAFIAETVRAGINAVPKGQLEGAMSNGLSWWQGMRYIVLPQAFKLVIPPLGNQF 149 Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 +NL+KNSS+ V DL+ I T +I YL L++ ++ +M L + Sbjct: 150 INLIKNSSVLAFVAGLDLMYQANQISQMTFDTFGPFIIVGIFYLILTMPMSYYMRYLETR 209 Query: 392 I 392 + Sbjct: 210 L 210 Score = 45.8 bits (107), Expect = 0.012, Method: Compositional matrix adjust. Identities = 29/76 (38%), Positives = 41/76 (53%) Query: 83 SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142 S+A L GF T + +I + I+GT + NKLV I R+Y+EV RNIP L Sbjct: 6 QSHAGEFLTGFGWTIASSILALIGSLILGTAFALMEVVPNKLVNIIGRIYIEVVRNIPLL 65 Query: 143 VVIFFLYKSVLSVLPI 158 V+ F Y + +V+ I Sbjct: 66 VITMFFYVVIANVIKI 81 >gi|229089704|ref|ZP_04220965.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus Rock3-42] gi|228693603|gb|EEL47305.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus Rock3-42] Length = 214 Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 61/185 (32%), Positives = 99/185 (53%), Gaps = 30/185 (16%) Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPT 234 +T++ V SF++G V+ + F + G + LPLL I F F LP Sbjct: 21 ITLEVALVAIVLSFIIGSVIGIVRYTKIPVFSQILGFIVEVIRNLPLLLIIFFTYFALPE 80 Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294 LK ++ ++ +AL+ + AA I+EIVRSGL+++ + Sbjct: 81 A---GLKLEI---------------------ITAVIVALTIFEAAMISEIVRSGLLSIEK 116 Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354 GQ+EAA + GLT+ +A ++LPQA+R ++PPL SQ+++LLK++SLAVA+ +L+ Sbjct: 117 GQIEAARSSGLTYVQALWHIILPQALRRMVPPLVSQFISLLKDTSLAVAISLPELMHNAQ 176 Query: 355 TIINQ 359 I Q Sbjct: 177 IISGQ 181 Score = 37.0 bits (84), Expect = 6.1, Method: Compositional matrix adjust. Identities = 21/61 (34%), Positives = 36/61 (59%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G + T +A ++ + IIG+++G R + + + I VEV RN+P L++IFF Sbjct: 15 LLKGLLITLEVALVAIVLSFIIGSVIGIVRYTKIPVFSQILGFIVEVIRNLPLLLIIFFT 74 Query: 149 Y 149 Y Sbjct: 75 Y 75 >gi|170691133|ref|ZP_02882299.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia graminis C4D1M] gi|170144382|gb|EDT12544.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia graminis C4D1M] Length = 216 Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 42/101 (41%), Positives = 68/101 (67%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + + LS Y A+IAE+ RSG+ AVP+GQ E A LGL+ +A V+LPQ + ++P Sbjct: 86 FAAGVVGLSVYQGAYIAEVFRSGIEAVPKGQWEVAQILGLSKTQAFFSVILPQTGKIVMP 145 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 PL QYL+L+K++S+ +G ++L+ G I+++ G+ +EI Sbjct: 146 PLIGQYLSLIKDTSIVSMIGMSELMHGGQAIVDRIGKPVEI 186 >gi|213970849|ref|ZP_03398972.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tomato T1] gi|301384515|ref|ZP_07232933.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tomato Max13] gi|302060677|ref|ZP_07252218.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tomato K40] gi|302130492|ref|ZP_07256482.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213924372|gb|EEB57944.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tomato T1] Length = 248 Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 49/129 (37%), Positives = 77/129 (59%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+S+ + L +TAA + E VR+G+ A+P+GQ AA A+G + VLLPQA R IIP Sbjct: 111 FLSVVVCLGLFTAARVCEQVRTGIEALPKGQESAARAMGFKLPQIYWNVLLPQAYRIIIP 170 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PLTS++LN+ KNSS+A +G +L++ + E + IY +L++ + L M Sbjct: 171 PLTSEFLNVFKNSSVASLIGLMELLAQTKQTAEFSANLFEAFTLATLIYFTLNMSLMLLM 230 Query: 386 NRLNAKIAL 394 + K+A+ Sbjct: 231 RMIEKKVAV 239 Score = 43.1 bits (100), Expect = 0.075, Method: Compositional matrix adjust. Identities = 27/76 (35%), Positives = 41/76 (53%) Query: 82 DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141 +Y + G T +A I A I+G+++G R ++LV+ I YVE+FRN+P Sbjct: 18 SETYLDWFISGLGWTIAIAVVAWIIALILGSVLGVMRTVPSRLVSGISTAYVEIFRNVPL 77 Query: 142 LVVIFFLYKSVLSVLP 157 LV +F Y V +LP Sbjct: 78 LVQLFIWYFLVPDLLP 93 >gi|254382235|ref|ZP_04997596.1| glutamate transport system permease gluC [Streptomyces sp. Mg1] gi|194341141|gb|EDX22107.1| glutamate transport system permease gluC [Streptomyces sp. Mg1] Length = 214 Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 49/122 (40%), Positives = 78/122 (63%), Gaps = 2/122 (1%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +AL CYT+AFI E++RSG+ VP GQ EAA +LG++ + V+LPQA RS+IPP+ S Sbjct: 89 LALGCYTSAFICEVLRSGINTVPTGQGEAARSLGMSFGQTLGSVVLPQAFRSVIPPIGST 148 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI-YLSLSIMIALFMNRLN 389 + L KNS++A A +L+ T +N+ G +I +W+ + YL +++ I+L + L Sbjct: 149 LIALAKNSAIAGAFSVTELLGTYKT-LNELGYSIVWTFVWIAVGYLIITLSISLLFHVLE 207 Query: 390 AK 391 + Sbjct: 208 KR 209 >gi|160934032|ref|ZP_02081419.1| hypothetical protein CLOLEP_02894 [Clostridium leptum DSM 753] gi|156866705|gb|EDO60077.1| hypothetical protein CLOLEP_02894 [Clostridium leptum DSM 753] Length = 244 Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 60/202 (29%), Positives = 113/202 (55%), Gaps = 18/202 (8%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 V LG+++++ + K + LY++ +I G P ++ + + Y + F Sbjct: 51 VIGITLGVLIAVVVNAAKANPRLNWAKKICSLYVT--VIRGTPVVLQLMIIYYIIFRSVQ 108 Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 + Q +GG +A +AA+I+EI+RSG+ ++ RGQMEAA +LGL+ KA Sbjct: 109 IPQI-VVGG-----------LAFGLNSAAYISEIIRSGIESIDRGQMEAARSLGLSRGKA 156 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA-IEIIL- 368 RL++LPQA+++I+P L ++++ L+K +S+A +G DL + ++T + +IL Sbjct: 157 MRLIILPQAVKNILPALGNEFVTLVKETSVAGYIGLRDLTKASDIVASRTYDYFVPLILA 216 Query: 369 --IWMFIYLSLSIMIALFMNRL 388 +++ I L L+ ++ +F RL Sbjct: 217 ACVYLVIVLGLTKLVRMFERRL 238 >gi|29832943|ref|NP_827577.1| ABC transporter permease protein [Streptomyces avermitilis MA-4680] gi|29610064|dbj|BAC74112.1| putative polar amino acid ABC transporter permease protein [Streptomyces avermitilis MA-4680] Length = 277 Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 73/215 (33%), Positives = 113/215 (52%), Gaps = 25/215 (11%) Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL---VLIALKYQLHF 246 FV VLG+V++L RLS + L +YI F GLP L V + + L F Sbjct: 81 FVVGLVLGMVIALM--RLS---SVGPYRWLAGIYIEIFR--GLPALLIFVFVGVAVPLAF 133 Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306 I G T + + +AL +AA++AE +R+G+ AVP+GQMEAA +LG + Sbjct: 134 PG------TEIPGGT----YGKVALALGLVSAAYMAETIRAGIQAVPKGQMEAARSLGFS 183 Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA----DLVSVGGTIINQTGQ 362 H +A +++PQA R +IPPLT++ + L K+SSL + +G +L G + +QT Sbjct: 184 HARAMVSIIIPQAFRIVIPPLTNELVLLFKDSSLVLFLGVTLEERELTKFGRDLASQTAN 243 Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 + IL+ YL +++ + + RL AK K Sbjct: 244 STP-ILVAGLCYLLVTVPLGFVVRRLEAKAGEATK 277 Score = 37.0 bits (84), Expect = 5.6, Method: Compositional matrix adjust. Identities = 19/73 (26%), Positives = 36/73 (49%) Query: 85 YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144 + I + NT SG + ++G ++ RLS+ W+ +Y+E+FR +P L++ Sbjct: 62 FPDVITLALKNTVLYTMSGFVVGLVLGMVIALMRLSSVGPYRWLAGIYIEIFRGLPALLI 121 Query: 145 IFFLYKSVLSVLP 157 F+ +V P Sbjct: 122 FVFVGVAVPLAFP 134 >gi|283784424|ref|YP_003364289.1| glutamate/aspartate ABC transporter, permease protein [Citrobacter rodentium ICC168] gi|282947878|emb|CBG87440.1| glutamate/aspartate ABC transporter, permease protein [Citrobacter rodentium ICC168] Length = 224 Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 44/127 (34%), Positives = 79/127 (62%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 +S +A S + AA+ +EI+R+G+ ++ RGQ AA+ALG+TH ++ +LV+LPQA R+++ Sbjct: 96 RLISAMVAFSMFEAAYYSEIIRAGIQSISRGQSSAALALGMTHWQSMKLVILPQAFRAMV 155 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 P L +Q + L +++SL + AD TI + G +E+IL +Y +S+ +L Sbjct: 156 PLLLTQGIVLFQDTSLVYVLSLADFFRTASTIGERDGTQVEMILFAGAVYFVISLSASLL 215 Query: 385 MNRLNAK 391 ++ L + Sbjct: 216 VSYLKKR 222 Score = 43.1 bits (100), Expect = 0.081, Method: Compositional matrix adjust. Identities = 29/92 (31%), Positives = 49/92 (53%), Gaps = 10/92 (10%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G + T + + ++ + GT++ RLS+ VAW +VYV VFR+IP ++V+ + Sbjct: 16 LLDGLLITLKITLTAVVVGIVWGTILAVMRLSSFAPVAWFAKVYVNVFRSIPLVMVLLWF 75 Query: 149 Y-------KSVLSVLPIPD---HSIVLPFGMF 170 Y + VL + P D S ++ F MF Sbjct: 76 YLIVPGLLQDVLGLSPKTDIRLISAMVAFSMF 107 >gi|330877359|gb|EGH11508.1| amino acid ABC transporter permease [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 248 Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 49/129 (37%), Positives = 77/129 (59%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+S+ + L +TAA + E VR+G+ A+P+GQ AA A+G + VLLPQA R IIP Sbjct: 111 FLSVVVCLGLFTAARVCEQVRTGIEALPKGQESAARAMGFKLPQIYWNVLLPQAYRIIIP 170 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PLTS++LN+ KNSS+A +G +L++ + E + IY +L++ + L M Sbjct: 171 PLTSEFLNVFKNSSVASLIGLMELLAQTKQTAEFSANLFEAFTLATLIYFTLNMSLMLLM 230 Query: 386 NRLNAKIAL 394 + K+A+ Sbjct: 231 RMIEKKVAV 239 Score = 42.7 bits (99), Expect = 0.098, Method: Compositional matrix adjust. Identities = 32/102 (31%), Positives = 48/102 (47%), Gaps = 12/102 (11%) Query: 56 NLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVG 115 N G+ F S G E +Y + G T +A + A I+G+++G Sbjct: 4 NWDWGVFFKSTGVGSE------------TYLDWFISGLGWTIAIAVVAWVIALILGSVLG 51 Query: 116 AGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLP 157 R ++LV+ I YVE+FRN+P LV +F Y V +LP Sbjct: 52 VMRTVPSRLVSGIATAYVEIFRNVPLLVQLFIWYFLVPDLLP 93 >gi|259502421|ref|ZP_05745323.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus antri DSM 16041] gi|259169564|gb|EEW54059.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus antri DSM 16041] Length = 502 Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 61/203 (30%), Positives = 106/203 (52%), Gaps = 22/203 (10%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 + F++GI+ +L S+ H ++ + YI I G P LV I Y Sbjct: 316 ICGFLIGILFALMRLSSSKLLH-----SIAICYIE--FIRGTPMLVQIMFVY-------- 360 Query: 251 LGQFNFIGGSTVS--PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308 F G+ + P ++ IA++ + A++AEI+RSG+ ++P GQ EAA +LG+T R Sbjct: 361 -----FGIGAIIQSMPALVAGIIAVAINSGAYVAEIIRSGIQSLPLGQTEAARSLGMTKR 415 Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368 + R V++PQA+++I P L ++++ LLK+SSL +G +L+ + T + + + Sbjct: 416 QTFRYVIMPQALKNIWPALGNEFITLLKDSSLVSTIGVTELMYQTQLVQADTYKGVLPLF 475 Query: 369 IWMFIYLSLSIMIALFMNRLNAK 391 I M IY L+ + +N K Sbjct: 476 ITMMIYFFLTFTLTRILNHFEKK 498 >gi|271967568|ref|YP_003341764.1| polar amino acid ABC transporter inner membrane protein [Streptosporangium roseum DSM 43021] gi|270510743|gb|ACZ89021.1| polar amino acid ABC transporter, inner membrane subunit [Streptosporangium roseum DSM 43021] Length = 274 Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 46/128 (35%), Positives = 77/128 (60%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P F L + L+ AA AEI R+G+++V RGQ EA +A+GLTH + R+++LPQA R + Sbjct: 133 PLFWKLVVPLAISNAAAFAEIFRAGILSVERGQSEAGLAVGLTHGQTMRMIVLPQAARRV 192 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 +P + SQ + LLK++SL V +A+L+ G + G I+ ++ +YL ++ ++ Sbjct: 193 LPSIVSQSVGLLKDTSLGFVVSYAELLYSGKVLATYNGLLIQTYIVVALVYLVVNASLSK 252 Query: 384 FMNRLNAK 391 L A+ Sbjct: 253 LARTLEAR 260 >gi|218510849|ref|ZP_03508727.1| putative amino acid ABC transporter, permease protein [Rhizobium etli Brasil 5] Length = 271 Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 49/127 (38%), Positives = 81/127 (63%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IAL ++FIAEI R+G +V GQ+EAA +LGL+ + RLV+ PQA+R I PPL++ Sbjct: 145 IALMIGYSSFIAEIFRAGFQSVDIGQIEAAKSLGLSRYRRFRLVVFPQAIRVIFPPLSND 204 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 +++++K+SSL +G AD+ +G + + + E I +IYL L+I ++L + R+ Sbjct: 205 FVSMVKDSSLVSVLGVADITQMGKVYASGSFRFFETYSIVTYIYLILTIGLSLALRRIEK 264 Query: 391 KIALKEK 397 K+ K + Sbjct: 265 KMKQKPR 271 >gi|56478020|ref|YP_159609.1| glutamate/aspartate ABC transporter transmembrane protein [Aromatoleum aromaticum EbN1] gi|56314063|emb|CAI08708.1| putative ABC transporter protein,probable glutamate/aspartate transmembrane subunit [Aromatoleum aromaticum EbN1] Length = 247 Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 51/127 (40%), Positives = 75/127 (59%), Gaps = 4/127 (3%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + L YTAA IAE V++G+ ++ RGQ +A +ALGLT + R V LP A R ++P +TS+ Sbjct: 111 VGLGLYTAARIAEQVKAGINSLSRGQRDAGLALGLTEWQTYRHVRLPMAYRIVLPAMTSE 170 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 +N+ KNS++ AVG +L II +T Q EI ++ Y +L A MNRL A Sbjct: 171 AMNIFKNSAVTYAVGILELYFQYKQIIEKTSQVFEITIVVTLAYFAL----AFLMNRLLA 226 Query: 391 KIALKEK 397 I + + Sbjct: 227 FIERRTR 233 >gi|229588678|ref|YP_002870797.1| glutamate/aspartate ABC transporter permease [Pseudomonas fluorescens SBW25] gi|229360544|emb|CAY47401.1| glutamate/aspartate ABC transport system, permease [Pseudomonas fluorescens SBW25] Length = 248 Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 49/129 (37%), Positives = 77/129 (59%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 ++S+ + L +TAA + E VR+G+ A+PRGQ AA A+G + VLLPQA R IIP Sbjct: 111 YLSVVVCLGLFTAARVCEQVRTGIQALPRGQESAARAMGFKLPQIYWNVLLPQAYRIIIP 170 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PLTS++LN+ KNSS+A +G +L++ + E + IY +L++ + L M Sbjct: 171 PLTSEFLNVFKNSSVASLIGLMELLAQTKQTAEFSANLFEAFTLATLIYFTLNMSLMLLM 230 Query: 386 NRLNAKIAL 394 + K+A+ Sbjct: 231 RMVEKKVAV 239 Score = 44.7 bits (104), Expect = 0.030, Method: Compositional matrix adjust. Identities = 33/102 (32%), Positives = 48/102 (47%), Gaps = 12/102 (11%) Query: 56 NLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVG 115 N G+ F S G E +Y + G T +A I A ++G+++G Sbjct: 4 NWDWGVFFKSTGVGSE------------TYLDWYIAGLGWTIAIAVVAWIIALLLGSILG 51 Query: 116 AGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLP 157 R N+LV+ I YVE+FRN+P LV +F Y V +LP Sbjct: 52 VMRTVPNRLVSGIATCYVELFRNVPLLVQLFIWYFLVPDMLP 93 >gi|229015972|ref|ZP_04172933.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus AH1273] gi|229022189|ref|ZP_04178739.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus AH1272] gi|228739120|gb|EEL89566.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus AH1272] gi|228745332|gb|EEL95373.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus AH1273] Length = 214 Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 60/172 (34%), Positives = 94/172 (54%), Gaps = 37/172 (21%) Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247 KI V S VLGI++ + + LPLL I F F LP + LK ++ Sbjct: 47 KIPVVSQVLGIIVEVI-------------RNLPLLLIIFFTYFALPE---VGLKLEI--- 87 Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307 ++ +AL+ + AA I+EIVRSGL+++ +GQ+EAA + GLT+ Sbjct: 88 ------------------ITAVIVALTIFEAAMISEIVRSGLLSIEKGQIEAARSSGLTY 129 Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359 +A ++LPQA+R ++PPL SQ+++LLK++SLAV + +L+ I Q Sbjct: 130 VQALWHIILPQALRRMVPPLVSQFISLLKDTSLAVGISLPELMHNAQIISGQ 181 >gi|227329656|ref|ZP_03833680.1| binding-protein-dependent transport system inner membrane component [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 247 Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 43/85 (50%), Positives = 63/85 (74%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 EF++ L+ Y++AFIAE +R+G+ V RGQ AA ALGLT ++ R V+LPQA++ + Sbjct: 115 EFLAGLAGLTLYSSAFIAEEIRAGIRGVARGQKYAAHALGLTGFQSMRYVVLPQALKIAL 174 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADL 349 PPL QY+N++KNSSL +A+G A+L Sbjct: 175 PPLLGQYMNIVKNSSLTMAIGVAEL 199 Score = 36.2 bits (82), Expect = 9.3, Method: Compositional matrix adjust. Identities = 21/66 (31%), Positives = 35/66 (53%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151 GF+ T L+ S ++ +T++G L+ A R ++ + Y +FRN P LV +FF Y Sbjct: 24 GFLITLGLSLSTIVLSTVLGFLLAAARDGQIHVLRGVVVAYSSLFRNTPLLVQLFFWYFG 83 Query: 152 VLSVLP 157 + P Sbjct: 84 AGQLFP 89 >gi|28871314|ref|NP_793933.1| amino acid ABC transporter permease [Pseudomonas syringae pv. tomato str. DC3000] gi|28854565|gb|AAO57628.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tomato str. DC3000] gi|330966687|gb|EGH66947.1| amino acid ABC transporter permease [Pseudomonas syringae pv. actinidiae str. M302091] gi|331015652|gb|EGH95708.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 248 Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 49/129 (37%), Positives = 77/129 (59%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+S+ + L +TAA + E VR+G+ A+P+GQ AA A+G + VLLPQA R IIP Sbjct: 111 FLSVVVCLGLFTAARVCEQVRTGIEALPKGQESAARAMGFKLPQIYWNVLLPQAYRIIIP 170 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PLTS++LN+ KNSS+A +G +L++ + E + IY +L++ + L M Sbjct: 171 PLTSEFLNVFKNSSVASLIGLMELLAQTKQTAEFSANLFEAFTLATLIYFTLNMSLMLLM 230 Query: 386 NRLNAKIAL 394 + K+A+ Sbjct: 231 RMIEKKVAV 239 Score = 43.5 bits (101), Expect = 0.064, Method: Compositional matrix adjust. Identities = 33/102 (32%), Positives = 48/102 (47%), Gaps = 12/102 (11%) Query: 56 NLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVG 115 N G+ F S G E +Y + G T +A I A I+G+++G Sbjct: 4 NWDWGVFFKSTGVGSE------------TYLDWFISGLGWTIAIAVVAWIIALILGSVLG 51 Query: 116 AGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLP 157 R ++LV+ I YVE+FRN+P LV +F Y V +LP Sbjct: 52 VMRTVPSRLVSGIATAYVEIFRNVPLLVQLFIWYFLVPDLLP 93 >gi|330954114|gb|EGH54374.1| glutamine ABC transporter permease [Pseudomonas syringae Cit 7] Length = 233 Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 56/151 (37%), Positives = 90/151 (59%), Gaps = 4/151 (2%) Query: 232 LPTLVLIALKYQLHFDKP-VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290 +PTLV + L Y F P +L + I + S E++ IAL AA+ +E +RSGL Sbjct: 69 VPTLVQLMLWY---FGIPTLLSENTQIWLANYSTEYLFSVIALGLCQAAYFSEDIRSGLR 125 Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 A+P GQ+EA+ ALGL + ++ R V+LPQ +R+ +P L + + L KN+SL +A+G +L Sbjct: 126 AIPAGQVEASRALGLGYVRSMRYVILPQGVRNCLPSLINHTVLLFKNTSLVMAIGVVELT 185 Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 + N T + E L+ +YL++S+M+ Sbjct: 186 YATREVENYTFRTFEAYLVATVVYLAISLML 216 >gi|91778080|ref|YP_553288.1| polar amino acid ABC transporter inner membrane protein [Burkholderia xenovorans LB400] gi|91690740|gb|ABE33938.1| amino acid ABC transporter membrane protein, PAAT family [Burkholderia xenovorans LB400] Length = 222 Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 45/129 (34%), Positives = 83/129 (64%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P F+ + L Y+AA+++EIVR + +V RGQMEAA ++G++ +A R ++LPQA+ + Sbjct: 87 PAFVCGMLGLGLYSAAYVSEIVRGAIQSVDRGQMEAARSIGMSAGQAMRAIILPQAIVRM 146 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 IPPL ++++ L+KNS+L + DL+ G II+ + +++E+ L +YL L+ Sbjct: 147 IPPLGNEFIALIKNSALVSLLTIDDLMHEGQKIISVSYRSLEVYLAIALVYLVLTQATNY 206 Query: 384 FMNRLNAKI 392 ++R+ ++ Sbjct: 207 ALHRVERRL 215 >gi|241204560|ref|YP_002975656.1| polar amino acid ABC transcriptional regulator inner membrane protein [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240858450|gb|ACS56117.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 224 Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 45/94 (47%), Positives = 64/94 (68%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + IAL+ A FI EIV +G+ AVP GQ+EAA+A GL+ + R V+LPQAMR ++P Sbjct: 89 FSAGIIALTNLAACFICEIVAAGIRAVPTGQIEAALASGLSRWQRMRQVVLPQAMRIVLP 148 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359 PL QY+ L+K+SS+ A+G DL VG ++ + Sbjct: 149 PLVGQYVLLIKDSSVVSAIGLTDLTRVGWLVVQR 182 >gi|161525882|ref|YP_001580894.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia multivorans ATCC 17616] gi|189349396|ref|YP_001945024.1| polar amino acid transporter permease [Burkholderia multivorans ATCC 17616] gi|221202316|ref|ZP_03575350.1| glutamate/aspartate ABC transporter, permease protein GltJ [Burkholderia multivorans CGD2M] gi|221209130|ref|ZP_03582124.1| glutamate/aspartate ABC transporter, permease protein GltJ [Burkholderia multivorans CGD2] gi|221214521|ref|ZP_03587492.1| glutamate/aspartate ABC transporter, permease protein GltJ [Burkholderia multivorans CGD1] gi|160343311|gb|ABX16397.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia multivorans ATCC 17616] gi|189333418|dbj|BAG42488.1| polar amino acid transport system permease protein [Burkholderia multivorans ATCC 17616] gi|221165778|gb|EED98253.1| glutamate/aspartate ABC transporter, permease protein GltJ [Burkholderia multivorans CGD1] gi|221171034|gb|EEE03487.1| glutamate/aspartate ABC transporter, permease protein GltJ [Burkholderia multivorans CGD2] gi|221177890|gb|EEE10303.1| glutamate/aspartate ABC transporter, permease protein GltJ [Burkholderia multivorans CGD2M] Length = 246 Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 45/129 (34%), Positives = 75/129 (58%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + + L +T A + E VRSG+ A+P+GQ A +A+G T + R VLLP A R I+P Sbjct: 111 FTASIVCLGLFTGARVCEQVRSGINALPKGQRAAGLAMGFTQWQTYRYVLLPVAYRIIVP 170 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PLTS++LN+ KNS++A +G DL + +++ T Q E + Y+ +++++ M Sbjct: 171 PLTSEFLNIFKNSAVASTIGLLDLSAQARQLVDYTAQTYESFIAVTLAYVLINLVVMGLM 230 Query: 386 NRLNAKIAL 394 + + L Sbjct: 231 RWIEGRTRL 239 Score = 43.5 bits (101), Expect = 0.057, Method: Compositional matrix adjust. Identities = 28/77 (36%), Positives = 41/77 (53%) Query: 81 SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140 ++Y ++ GF T ++ + A I+G+L G R NK +A I VYV +FRNIP Sbjct: 18 EPTTYFGWLMSGFWVTIEVSLVAWVIALIVGSLFGVLRTVPNKWLAAIGTVYVSIFRNIP 77 Query: 141 PLVVIFFLYKSVLSVLP 157 +V F Y V +LP Sbjct: 78 LIVQFFIWYLVVPELLP 94 >gi|322833891|ref|YP_004213918.1| polar amino acid ABC transporter inner membrane subunit [Rahnella sp. Y9602] gi|321169092|gb|ADW74791.1| polar amino acid ABC transporter, inner membrane subunit [Rahnella sp. Y9602] Length = 225 Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 43/127 (33%), Positives = 79/127 (62%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 +S +A + + AA+ +EI+R+G+I++ RGQ AA+ALG+T ++ +LV+LPQA R+++ Sbjct: 96 RLISAMVAFALFEAAYYSEIIRAGIISIARGQSSAALALGMTQWQSMKLVILPQAFRAMV 155 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 P L +Q + L +++SL +G AD I ++ G +E++L IY +S+ +L Sbjct: 156 PLLLTQAIVLFQDTSLVYVLGLADFFRSASNIGDRDGTLVEMVLFAGLIYFVISLCASLL 215 Query: 385 MNRLNAK 391 + L + Sbjct: 216 VRYLKKR 222 >gi|296162980|ref|ZP_06845757.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. Ch1-1] gi|295886774|gb|EFG66615.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. Ch1-1] Length = 225 Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 44/126 (34%), Positives = 77/126 (61%) Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327 S +A S + AA+ +EI+R+G+ AVPRGQ+ AA ALG+ + +A RL++LPQA R+++P L Sbjct: 99 SAMVAFSLFEAAYYSEIIRAGIQAVPRGQVNAAFALGMNYAQAMRLIVLPQAFRAMVPLL 158 Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387 +Q + L +++SL + AD I ++ G +E++L Y + ++ + + Sbjct: 159 LTQGIVLFQDTSLVYVISLADFFRTATNIGDRDGTNVEMVLFAGACYFVICVIASSLVKG 218 Query: 388 LNAKIA 393 L K+A Sbjct: 219 LQKKVA 224 >gi|120403817|ref|YP_953646.1| polar amino acid ABC transporter inner membrane subunit [Mycobacterium vanbaalenii PYR-1] gi|119956635|gb|ABM13640.1| amino acid ABC transporter membrane protein, PAAT family [Mycobacterium vanbaalenii PYR-1] Length = 308 Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 65/180 (36%), Positives = 101/180 (56%), Gaps = 23/180 (12%) Query: 188 KIFVFSFVLGIVLSLFAT--RLSRHFHEKTGKALPLL----YISTFLIFGLPTLVLIALK 241 ++ ++S ++GIVL +F T RLS + P+L ++ ++ G P V +A Sbjct: 73 QLTIYSMIIGIVLGVFLTVMRLSDN---------PVLSSVAWVFLWIFRGTPIYVQLAFW 123 Query: 242 ------YQ-LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294 YQ + P F + +S F+ I L AA++AEIVR+G+++VP Sbjct: 124 GLFPTIYQNIQLGVPFGPSFFHLDLQDLSIPFVLAVIGLGLNEAAYMAEIVRAGIMSVPE 183 Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA-DLVSVG 353 GQMEA+ ALG++ KA R +LPQAMR IIPP ++ ++LLK +SL AV +A D+ S+ Sbjct: 184 GQMEASTALGMSWGKAMRRTVLPQAMRVIIPPTGNELISLLKTTSLVTAVPYAFDVYSIA 243 >gi|296449544|ref|ZP_06891321.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Clostridium difficile NAP08] gi|296878133|ref|ZP_06902148.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Clostridium difficile NAP07] gi|296261608|gb|EFH08426.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Clostridium difficile NAP08] gi|296430886|gb|EFH16718.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Clostridium difficile NAP07] Length = 230 Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 56/185 (30%), Positives = 107/185 (57%), Gaps = 8/185 (4%) Query: 212 HEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG-QFNFIGGSTVSPEFMSLY 270 K +A+ +YI ++ G P LV I Y + F P LG +F + G + EF++ Sbjct: 52 KSKVLRAISSIYIE--VLRGTPLLVQI---YIVWFGLPQLGIRFPMLFG--IPSEFIASA 104 Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 ALS + A++AEI+RSG+ +V GQMEA+ +LGL + R +++PQA+++I+P L ++ Sbjct: 105 FALSVNSGAYVAEILRSGIQSVDNGQMEASRSLGLNYWSTMRYIIIPQAIKNILPSLANE 164 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++ L+K SS+ +G +++ + N +A+E +++ IY ++ ++ + L Sbjct: 165 FITLVKESSIISVIGVVEIMRTADIVKNAAFRALEPLIVAAAIYFVITFTLSRLVGLLEK 224 Query: 391 KIALK 395 K+++ Sbjct: 225 KLSVS 229 >gi|167586131|ref|ZP_02378519.1| glutamate/aspartate ABC transporter, permease protein GltK [Burkholderia ubonensis Bu] Length = 225 Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 43/108 (39%), Positives = 69/108 (63%) Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320 T+ S +A S + AA+ +EI+R+G+ AVPRGQ+ AA ALG+ + A RLV+LPQA Sbjct: 92 TIDIRLASAMVAFSLFEAAYYSEIIRAGIQAVPRGQVNAAFALGMNYATAMRLVILPQAF 151 Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368 R+++P L +Q + L +++SL + AD I ++ G ++E+IL Sbjct: 152 RAMVPLLLTQAIVLFQDTSLVYVISLADFFRTAANIGDRDGTSVEMIL 199 Score = 36.2 bits (82), Expect = 8.9, Method: Compositional matrix adjust. Identities = 20/46 (43%), Positives = 29/46 (63%) Query: 111 GTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVL 156 GTL+ RLS K +AW + YV VFR+IP ++V+ + + V VL Sbjct: 38 GTLLALMRLSGVKPLAWFAQGYVTVFRSIPLVMVLLWFFLIVPQVL 83 >gi|327190179|gb|EGE57284.1| putative amino acid ABC transporter, permease protein [Rhizobium etli CNPAF512] Length = 271 Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 49/127 (38%), Positives = 81/127 (63%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IAL ++FIAEI R+G +V GQ+EAA +LGL+ + RLV+ PQA+R I PPL++ Sbjct: 145 IALMIGYSSFIAEIFRAGFQSVDIGQIEAAKSLGLSRYRRFRLVVFPQAIRVIFPPLSND 204 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 +++++K+SSL +G AD+ +G + + + E I +IYL L+I ++L + R+ Sbjct: 205 FVSMVKDSSLVSVLGVADITQMGKVYASGSFRFFETYSIVTYIYLILTIGLSLALRRIER 264 Query: 391 KIALKEK 397 K+ K + Sbjct: 265 KMKQKPR 271 >gi|322392259|ref|ZP_08065720.1| amino acid ABC superfamily ATP binding cassette transporter, permease protein [Streptococcus peroris ATCC 700780] gi|321144794|gb|EFX40194.1| amino acid ABC superfamily ATP binding cassette transporter, permease protein [Streptococcus peroris ATCC 700780] Length = 227 Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 64/209 (30%), Positives = 115/209 (55%), Gaps = 19/209 (9%) Query: 195 VLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF---GLPTLVLIALKYQL-HFDKPV 250 +LG++L+ FA R K PL++ S I+ G P +V I + Y L H P+ Sbjct: 33 ILGVLLA-FAQR---------SKIKPLVWFSNLYIWIFRGTPMMVQIMIAYALMHISAPI 82 Query: 251 LGQFNFIGGSTVS-PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309 + IG V + I +S + A+++E VR+G+ AVP+GQ+EAA +LG+ + Sbjct: 83 IQ----IGILDVDLTRLIPGIIIISMNSGAYVSETVRAGINAVPKGQLEAAYSLGIRPKN 138 Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369 A R V+LPQA+++I+P L ++++ ++K+SSL A+G +L + T+ T + +L Sbjct: 139 AMRYVILPQAIKNILPALGNEFITIIKDSSLLSAIGVMELWNGATTVSTTTYLPLTPLLF 198 Query: 370 WMFIYLSLSIMIALFMNRLNAKIALKEKK 398 F YL ++ ++ + + ++ +KK Sbjct: 199 AAFYYLIMTSILTVALKAFENRMGQGDKK 227 >gi|318076288|ref|ZP_07983620.1| arginine/ornithine transport permease [Streptomyces sp. SA3_actF] Length = 286 Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 73/239 (30%), Positives = 120/239 (50%), Gaps = 20/239 (8%) Query: 158 IPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGK 217 +PD+ F ++R LS TM V G+VL++ RLS++ Sbjct: 34 VPDY--------FFDDRILSGLGKTMLLTVVAMVIGIAGGVVLAVM--RLSKN---PVTS 80 Query: 218 ALPLLYISTFLIFGLPTLVLIALKYQLH--FDKPVLGQFNFIGGSTVSPEFMSLYIALSC 275 ++ YI F G P LV + + + L F+ LG S+ ++ + L Sbjct: 81 SIAWFYIWFFR--GTPVLVQLMVWFNLGLVFEYINLGPLYKDYWSSFMTPLLTALLGLGL 138 Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335 AA++AEI R+GL+AV GQ EAA ALG++H K R +++PQAMR I+PP ++ +N+L Sbjct: 139 NEAAYMAEICRAGLLAVDEGQTEAAHALGMSHAKTLRRIVIPQAMRVIVPPTGNEVINML 198 Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI---WMFIYLSLSIMIALFMNRLNAK 391 K +SL AV + +L+ I +G +E++ + W I S+ + ++ R A+ Sbjct: 199 KTTSLVAAVQYPELLRAAQDIGQVSGAPVEMLFLAAAWYLILTSVLSIGQFYIERYYAR 257 >gi|229028441|ref|ZP_04184563.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus AH1271] gi|228732890|gb|EEL83750.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus AH1271] Length = 214 Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 60/172 (34%), Positives = 94/172 (54%), Gaps = 37/172 (21%) Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247 KI V S VLGI++ + + LPLL I F F LP + LK ++ Sbjct: 47 KIPVVSQVLGIIVEVI-------------RNLPLLLIIFFTYFALPE---VGLKLEI--- 87 Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307 ++ +AL+ + AA I+EIVRSGL+++ +GQ+EAA + GLT+ Sbjct: 88 ------------------ITAVIVALTIFEAAMISEIVRSGLLSIEKGQIEAARSSGLTY 129 Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359 +A ++LPQA+R ++PPL SQ+++LLK++SLAV + +L+ I Q Sbjct: 130 VQALWHIILPQALRRMVPPLVSQFISLLKDTSLAVGISLPELMHNAQIISGQ 181 Score = 38.5 bits (88), Expect = 1.8, Method: Compositional matrix adjust. Identities = 21/61 (34%), Positives = 37/61 (60%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G + T +A ++ + IIG+++G R +V+ + + VEV RN+P L++IFF Sbjct: 15 LLKGLLITLEVALVAIVLSFIIGSVIGILRYMKIPVVSQVLGIIVEVIRNLPLLLIIFFT 74 Query: 149 Y 149 Y Sbjct: 75 Y 75 >gi|256830361|ref|YP_003159089.1| polar amino acid ABC transporter, inner membrane subunit [Desulfomicrobium baculatum DSM 4028] gi|256579537|gb|ACU90673.1| polar amino acid ABC transporter, inner membrane subunit [Desulfomicrobium baculatum DSM 4028] Length = 271 Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 46/124 (37%), Positives = 78/124 (62%) Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327 S +AL+ + A+ +EI+R+G++A+PRGQ E A++LG++ V+LPQA+R+I+PPL Sbjct: 136 SAVLALALFEGAYASEIIRAGILAIPRGQWEGALSLGMSRASVYMQVILPQALRNILPPL 195 Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387 TSQ ++L+K+S+L + DL G II +T + EI + IYL ++ ++ Sbjct: 196 TSQAVSLIKDSALVSTIAIYDLTMHGQAIIAETFLSFEIWSVVAAIYLVFTVTLSSLARL 255 Query: 388 LNAK 391 L + Sbjct: 256 LEKR 259 >gi|300868857|ref|ZP_07113463.1| putative ABC transporter, permease protein [Oscillatoria sp. PCC 6506] gi|300333074|emb|CBN58655.1| putative ABC transporter, permease protein [Oscillatoria sp. PCC 6506] Length = 217 Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 66/193 (34%), Positives = 100/193 (51%), Gaps = 12/193 (6%) Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV 262 F L R K K L L+Y+ F G P L+ + L + F V+ N + Sbjct: 36 FLVMLMRISPNKIIKYLSLIYVEFFQ--GTPLLMQLFLTF---FGLSVIFNLN------L 84 Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322 SP +++ IAL+ YT+AF+AEI R + A+P+GQ EA+ ALGL + K + ++LPQA++ Sbjct: 85 SP-WIAAAIALTTYTSAFLAEIWRGSVAAIPKGQWEASTALGLNYFKQLQRIILPQAIKM 143 Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382 IPP + ++K +SLA +GF +L I N T + + I IY L ++ Sbjct: 144 SIPPTVGFAVQVIKGTSLASVIGFVELTRSATAISNVTFKPFLVFTIAAVIYFCLCFPLS 203 Query: 383 LFMNRLNAKIALK 395 L+ L K A K Sbjct: 204 LWSKHLEQKFAYK 216 >gi|296390282|ref|ZP_06879757.1| putative permease of ABC transporter [Pseudomonas aeruginosa PAb1] Length = 248 Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 49/129 (37%), Positives = 77/129 (59%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 ++S+ + L +TAA + E VR+G+ A+P GQ AA A+G + R VLLPQA R IIP Sbjct: 111 YLSVVVCLGLFTAARVCEQVRTGIQALPYGQTSAARAMGFRLPQIYRHVLLPQAFRIIIP 170 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PLTS++LN+ KNSS+A +G +L++ + E + IY +L++ + L M Sbjct: 171 PLTSEFLNIFKNSSVASLIGLMELLAQTKQTAEFSANLFEAFTLATLIYFTLNMSLMLIM 230 Query: 386 NRLNAKIAL 394 + K+A+ Sbjct: 231 RLVERKVAV 239 Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust. Identities = 28/77 (36%), Positives = 41/77 (53%) Query: 81 SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140 +Y + G T +A G I A +G+L+G R N+LV+ + YVE+FRN+P Sbjct: 17 GSETYLDWYIAGLGWTIAIALVGWIIALALGSLLGVMRTVPNRLVSGLATAYVEIFRNVP 76 Query: 141 PLVVIFFLYKSVLSVLP 157 LV +F Y V +LP Sbjct: 77 LLVQLFIWYFLVPDLLP 93 >gi|317053312|ref|YP_004119079.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea sp. At-9b] gi|316953051|gb|ADU72523.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea sp. At-9b] Length = 247 Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 47/135 (34%), Positives = 76/135 (56%) Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321 ++PEF+ L + +AF+ E + +GL AVP GQ EAA++ G T A R +LLPQ + Sbjct: 110 LTPEFLCSAWGLGIFISAFLVEELSAGLYAVPDGQREAALSQGFTTAAALRWILLPQGLA 169 Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 + P+ QYLNL+K SSLA +GFA+L + + A+E + +YL+ +++ Sbjct: 170 NAWQPVAGQYLNLMKLSSLASGIGFAELTYQVRQVDSYNAHALEAFAVGTVLYLATGLLL 229 Query: 382 ALFMNRLNAKIALKE 396 L + L +K+ Sbjct: 230 GLIFSWLGPGQRIKD 244 >gi|169342343|ref|ZP_02863411.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Clostridium perfringens C str. JGS1495] gi|169299568|gb|EDS81631.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Clostridium perfringens C str. JGS1495] Length = 223 Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 43/109 (39%), Positives = 78/109 (71%), Gaps = 1/109 (0%) Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327 S IA+S +AA+++EI+R+G+ AV +GQ+EAA +LG+T R A RL++LPQA+++I+P + Sbjct: 96 SCIIAISLNSAAYVSEIIRAGIDAVDKGQLEAARSLGMTERMAMRLIILPQAIKNILPAI 155 Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE-IILIWMFIYL 375 ++++ ++K SS+A +G A+L+ + T + E +I+I MF ++ Sbjct: 156 GNEFVAIIKESSMASTIGVAELMYSSKIVTGATYKGFEPLIVIAMFYFV 204 >gi|124265637|ref|YP_001019641.1| putative ABC transporter protein glutamate/aspartate transmembrane subunit [Methylibium petroleiphilum PM1] gi|124258412|gb|ABM93406.1| putative ABC transporter protein, putative glutamate/aspartate transmembrane subunit [Methylibium petroleiphilum PM1] Length = 246 Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 46/105 (43%), Positives = 69/105 (65%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P F+ + AL +T+A IAE V++G+ ++PRGQ A +A+GLT + R VLLP A R + Sbjct: 109 PSFVLVVFALGFFTSARIAEQVKAGIQSLPRGQSYAGLAMGLTLGQTYRHVLLPMAFRIV 168 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368 IPPLTS+ +N++KNSS+A AV A+L +T + +E+ L Sbjct: 169 IPPLTSESMNIIKNSSVAFAVSIAELTMFAMQAQEETSRGVEVYL 213 >gi|218659439|ref|ZP_03515369.1| putative amino acid ABC transporter, permease protein [Rhizobium etli IE4771] Length = 129 Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 48/122 (39%), Positives = 79/122 (64%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IAL ++FIAEI R+G +V GQ+EAA +LGL+ + RLV+ PQA+R I PPL++ Sbjct: 3 IALMIGYSSFIAEIFRAGFQSVDIGQIEAAKSLGLSRYRRFRLVVFPQAIRVIFPPLSND 62 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 +++++K+SSL +G AD+ +G + + + E I +IYL L+I ++L + R+ Sbjct: 63 FVSMVKDSSLVSVLGVADITQMGKVYASGSFRFFETYSIVTYIYLILTIGLSLALRRIEK 122 Query: 391 KI 392 K+ Sbjct: 123 KM 124 >gi|170720285|ref|YP_001747973.1| polar amino acid ABC transporter inner membrane subunit [Pseudomonas putida W619] gi|169758288|gb|ACA71604.1| polar amino acid ABC transporter, inner membrane subunit [Pseudomonas putida W619] Length = 248 Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 50/128 (39%), Positives = 77/128 (60%) Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326 +S+ I L +TAA + E VR+G+ A+PRGQ AA A+G + + VLLPQA R IIPP Sbjct: 112 ISVVICLGLFTAARVCEQVRTGIQALPRGQEAAARAMGFSLPQIYNNVLLPQAYRIIIPP 171 Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386 LTS++LN+ KNSS+A +G +L++ + E + IY +L++ + L M Sbjct: 172 LTSEFLNVFKNSSVASLIGLMELLAQTKQTAEFSANLFEAFTLATLIYFTLNMGLMLLMR 231 Query: 387 RLNAKIAL 394 + K+A+ Sbjct: 232 LVEKKVAV 239 Score = 42.0 bits (97), Expect = 0.16, Method: Compositional matrix adjust. Identities = 22/47 (46%), Positives = 30/47 (63%) Query: 111 GTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLP 157 G+L+G R N+LV+ I YVE+FRN+P LV +F Y V +LP Sbjct: 47 GSLLGVMRTVPNRLVSGIATAYVELFRNVPLLVQLFIWYFLVPDLLP 93 >gi|255656164|ref|ZP_05401573.1| amino-acid ABC transporter, permease protein [Clostridium difficile QCD-23m63] gi|296450402|ref|ZP_06892158.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Clostridium difficile NAP08] gi|296879475|ref|ZP_06903469.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Clostridium difficile NAP07] gi|296260663|gb|EFH07502.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Clostridium difficile NAP08] gi|296429621|gb|EFH15474.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Clostridium difficile NAP07] Length = 222 Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 59/199 (29%), Positives = 112/199 (56%), Gaps = 15/199 (7%) Query: 195 VLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQF 254 +LG++L+ F S+ T +Y+S F G P L+ I + +F P++ F Sbjct: 36 LLGVILAFFTQTKSKILQYITR-----VYVSFFR--GTPLLIQI---FFFYFGFPMV--F 83 Query: 255 NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLV 314 +F+ SP ++++ I L ++A++AEI+R+ + +V +GQ EA A GL+ ++ + Sbjct: 84 SFM--KDCSP-YLAIVICLGVNSSAYMAEIIRASIESVDKGQQEACYAFGLSKYQSMVKI 140 Query: 315 LLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374 +LPQA S +PP+ S L+++K SSL + +G DL+ V + + EI ++ + IY Sbjct: 141 ILPQAATSAVPPIVSCTLDIIKGSSLGLTIGIQDLMGVAQVEAASSFKYFEIYMVTILIY 200 Query: 375 LSLSIMIALFMNRLNAKIA 393 ++SIM++ +++ +I Sbjct: 201 WAVSIMLSNIQSKVEKRIG 219 >gi|183598118|ref|ZP_02959611.1| hypothetical protein PROSTU_01483 [Providencia stuartii ATCC 25827] gi|188020277|gb|EDU58317.1| hypothetical protein PROSTU_01483 [Providencia stuartii ATCC 25827] Length = 246 Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 42/100 (42%), Positives = 66/100 (66%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+S + L +TAA + E VR+ + ++PRGQ A +A+GLT + R VLLP A R I+P Sbjct: 111 FISSTLCLGLFTAARMTEQVRAAIQSLPRGQKNAGLAMGLTLPQTYRYVLLPNAYRVILP 170 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365 P+TS+ LNL+KNS++A +G D+ + G +++ + A E Sbjct: 171 PMTSEMLNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAWE 210 Score = 42.0 bits (97), Expect = 0.16, Method: Compositional matrix adjust. Identities = 26/77 (33%), Positives = 41/77 (53%) Query: 81 SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140 +++Y +L G T L+ I A ++G+ G R N+ +A I VYVE+FRN+P Sbjct: 17 GNTTYLGWLLSGLEVTVALSICAWIIAFLVGSFFGILRTVPNRFLAMIGTVYVELFRNVP 76 Query: 141 PLVVIFFLYKSVLSVLP 157 +V F Y + +LP Sbjct: 77 LIVQFFTWYLVIPELLP 93 >gi|134294749|ref|YP_001118484.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia vietnamiensis G4] gi|134137906|gb|ABO53649.1| L-aspartate ABC transporter membrane protein / L-glutamate ABC transporter membrane protein [Burkholderia vietnamiensis G4] Length = 225 Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 44/132 (33%), Positives = 77/132 (58%) Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320 T+ S +A S + AA+ +EI+R+G+ AVPRGQ+ AA ALG+ + +A RLV+LPQA Sbjct: 92 TIDIRLASAMVAFSLFEAAYYSEIIRAGIQAVPRGQVNAAFALGMNYAQAMRLVILPQAF 151 Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380 R+++P L +Q + L +++SL + AD + ++ G +E++L Y + + Sbjct: 152 RAMVPLLLTQAIVLFQDTSLVYVISLADFFRTAANVGDRDGTTVEMVLFAGACYFVICSL 211 Query: 381 IALFMNRLNAKI 392 + + L K+ Sbjct: 212 ASALVKGLQKKV 223 Score = 38.1 bits (87), Expect = 2.8, Method: Compositional matrix adjust. Identities = 20/58 (34%), Positives = 34/58 (58%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 G + TF + ++ + GTL+ RLS K +AW + YV VFR+IP ++V+ + + Sbjct: 19 GAIVTFKITLIAIVIGIVWGTLLALMRLSGVKPLAWFAKGYVTVFRSIPLVMVLLWFF 76 >gi|118476328|ref|YP_893479.1| glutamine ABC transporter permease [Bacillus thuringiensis str. Al Hakam] gi|196035649|ref|ZP_03103052.1| amino acid ABC transporter, permease protein [Bacillus cereus W] gi|218901838|ref|YP_002449672.1| amino acid ABC transporter, permease protein [Bacillus cereus AH820] gi|228913331|ref|ZP_04076964.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228925830|ref|ZP_04088914.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228932069|ref|ZP_04094961.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228944394|ref|ZP_04106767.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|118415553|gb|ABK83972.1| amino acid ABC transporter membrane protein 2, PAAT family [Bacillus thuringiensis str. Al Hakam] gi|195991616|gb|EDX55581.1| amino acid ABC transporter, permease protein [Bacillus cereus W] gi|218539284|gb|ACK91682.1| amino acid ABC transporter, permease protein [Bacillus cereus AH820] gi|228815296|gb|EEM61544.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228827652|gb|EEM73394.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228833845|gb|EEM79398.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228846240|gb|EEM91259.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] Length = 214 Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 61/172 (35%), Positives = 94/172 (54%), Gaps = 37/172 (21%) Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247 KI V S VLGI++ + + LPLL I F F LP LK ++ Sbjct: 47 KIPVVSQVLGIIVEVI-------------RNLPLLLIIFFTYFALPEA---GLKLEI--- 87 Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307 ++ +AL+ + AA I+EIVRSGL+++ +GQ+EAA + GLT+ Sbjct: 88 ------------------ITAVIVALTIFEAAMISEIVRSGLLSIEKGQIEAARSSGLTY 129 Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359 +A ++LPQA+R ++PPL SQ+++LLK++SLAVA+ +L+ I Q Sbjct: 130 VQALWHIILPQALRRMVPPLVSQFISLLKDTSLAVAISLPELMHNAQIISGQ 181 Score = 38.9 bits (89), Expect = 1.5, Method: Compositional matrix adjust. Identities = 21/61 (34%), Positives = 37/61 (60%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G + T +A ++ + IIG+++G R +V+ + + VEV RN+P L++IFF Sbjct: 15 LLKGLLITLEVALVAIVLSFIIGSVIGILRYMKIPVVSQVLGIIVEVIRNLPLLLIIFFT 74 Query: 149 Y 149 Y Sbjct: 75 Y 75 >gi|30260796|ref|NP_843173.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. Ames] gi|47525921|ref|YP_017270.1| amino acid ABC transporter permease [Bacillus anthracis str. 'Ames Ancestor'] gi|49183634|ref|YP_026886.1| amino acid ABC transporter permease [Bacillus anthracis str. Sterne] gi|49480225|ref|YP_034900.1| glutamine ABC transporter permease [Bacillus thuringiensis serovar konkukian str. 97-27] gi|65318068|ref|ZP_00391027.1| COG0765: ABC-type amino acid transport system, permease component [Bacillus anthracis str. A2012] gi|165872943|ref|ZP_02217566.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. A0488] gi|167635139|ref|ZP_02393455.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. A0442] gi|167640927|ref|ZP_02399185.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. A0193] gi|170689042|ref|ZP_02880242.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. A0465] gi|170708502|ref|ZP_02898944.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. A0389] gi|177652796|ref|ZP_02935169.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. A0174] gi|190568586|ref|ZP_03021492.1| amino acid ABC transporter, permease protein [Bacillus anthracis Tsiankovskii-I] gi|196041862|ref|ZP_03109151.1| amino acid ABC transporter, permease protein [Bacillus cereus NVH0597-99] gi|227816488|ref|YP_002816497.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. CDC 684] gi|229599982|ref|YP_002865240.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. A0248] gi|254684281|ref|ZP_05148141.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. CNEVA-9066] gi|254722085|ref|ZP_05183874.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. A1055] gi|254738745|ref|ZP_05196448.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. Western North America USA6153] gi|254742043|ref|ZP_05199730.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. Kruger B] gi|254754971|ref|ZP_05207005.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. Vollum] gi|254762298|ref|ZP_05214142.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. Australia 94] gi|30254245|gb|AAP24659.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. Ames] gi|47501069|gb|AAT29745.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. 'Ames Ancestor'] gi|49177561|gb|AAT52937.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. Sterne] gi|49331781|gb|AAT62427.1| ABC transporter, permease; probable glutamine ABC transporter, permease [Bacillus thuringiensis serovar konkukian str. 97-27] gi|164711297|gb|EDR16851.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. A0488] gi|167511147|gb|EDR86535.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. A0193] gi|167529398|gb|EDR92149.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. A0442] gi|170126623|gb|EDS95508.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. A0389] gi|170667027|gb|EDT17790.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. A0465] gi|172081830|gb|EDT66899.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. A0174] gi|190560380|gb|EDV14359.1| amino acid ABC transporter, permease protein [Bacillus anthracis Tsiankovskii-I] gi|196027356|gb|EDX65974.1| amino acid ABC transporter, permease protein [Bacillus cereus NVH0597-99] gi|227005796|gb|ACP15539.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. CDC 684] gi|229264390|gb|ACQ46027.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. A0248] Length = 214 Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 61/172 (35%), Positives = 94/172 (54%), Gaps = 37/172 (21%) Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247 KI V S VLGI++ + + LPLL I F F LP LK ++ Sbjct: 47 KIPVVSQVLGIIVEVI-------------RNLPLLLIIFFTYFALPEA---GLKLEI--- 87 Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307 ++ +AL+ + AA I+EIVRSGL+++ +GQ+EAA + GLT+ Sbjct: 88 ------------------ITAVIVALTIFEAAMISEIVRSGLLSIEKGQIEAARSSGLTY 129 Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359 +A ++LPQA+R ++PPL SQ+++LLK++SLAVA+ +L+ I Q Sbjct: 130 VQALWHIILPQALRRMVPPLVSQFISLLKDTSLAVAISLPELMHNAQIISGQ 181 Score = 38.5 bits (88), Expect = 1.7, Method: Compositional matrix adjust. Identities = 21/61 (34%), Positives = 37/61 (60%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G + T +A ++ + IIG+++G R +V+ + + VEV RN+P L++IFF Sbjct: 15 LLKGLLITLEVALVAIVLSFIIGSVIGILRYMKIPVVSQVLGIIVEVIRNLPLLLIIFFT 74 Query: 149 Y 149 Y Sbjct: 75 Y 75 >gi|15596538|ref|NP_250032.1| amino acid ABC transporter membrane protein [Pseudomonas aeruginosa PAO1] gi|107100792|ref|ZP_01364710.1| hypothetical protein PaerPA_01001820 [Pseudomonas aeruginosa PACS2] gi|116049293|ref|YP_791904.1| putative permease of ABC transporter [Pseudomonas aeruginosa UCBPP-PA14] gi|218892554|ref|YP_002441423.1| putative permease of ABC transporter [Pseudomonas aeruginosa LESB58] gi|254234460|ref|ZP_04927783.1| hypothetical protein PACG_00312 [Pseudomonas aeruginosa C3719] gi|254239712|ref|ZP_04933034.1| hypothetical protein PA2G_00336 [Pseudomonas aeruginosa 2192] gi|313106332|ref|ZP_07792575.1| LOW QUALITY PROTEIN: putative permease of ABC transporter [Pseudomonas aeruginosa 39016] gi|9947281|gb|AAG04730.1|AE004563_7 amino acid ABC transporter membrane protein [Pseudomonas aeruginosa PAO1] gi|115584514|gb|ABJ10529.1| putative permease of ABC transporter [Pseudomonas aeruginosa UCBPP-PA14] gi|126166391|gb|EAZ51902.1| hypothetical protein PACG_00312 [Pseudomonas aeruginosa C3719] gi|126193090|gb|EAZ57153.1| hypothetical protein PA2G_00336 [Pseudomonas aeruginosa 2192] gi|218772782|emb|CAW28567.1| probable permease of ABC transporter [Pseudomonas aeruginosa LESB58] gi|310879077|gb|EFQ37671.1| LOW QUALITY PROTEIN: putative permease of ABC transporter [Pseudomonas aeruginosa 39016] Length = 248 Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 49/129 (37%), Positives = 77/129 (59%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 ++S+ + L +TAA + E VR+G+ A+P GQ AA A+G + R VLLPQA R IIP Sbjct: 111 YLSVVVCLGLFTAARVCEQVRTGIQALPYGQTSAARAMGFRLPQIYRHVLLPQAFRIIIP 170 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PLTS++LN+ KNSS+A +G +L++ + E + IY +L++ + L M Sbjct: 171 PLTSEFLNIFKNSSVASLIGLMELLAQTKQTAEFSANLFEAFTLATLIYFTLNMSLMLIM 230 Query: 386 NRLNAKIAL 394 + K+A+ Sbjct: 231 RLVERKVAV 239 Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust. Identities = 29/77 (37%), Positives = 41/77 (53%) Query: 81 SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140 +Y + G T +A G I A +G+L+G R N+LV+ I YVE+FRN+P Sbjct: 17 GSETYLDWYIAGLGWTIAIALVGWIIALALGSLLGVMRTVPNRLVSGIATAYVEIFRNVP 76 Query: 141 PLVVIFFLYKSVLSVLP 157 LV +F Y V +LP Sbjct: 77 LLVQLFIWYFLVPDLLP 93 >gi|289642307|ref|ZP_06474455.1| polar amino acid ABC transporter, inner membrane subunit [Frankia symbiont of Datisca glomerata] gi|289507839|gb|EFD28790.1| polar amino acid ABC transporter, inner membrane subunit [Frankia symbiont of Datisca glomerata] Length = 285 Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 47/135 (34%), Positives = 81/135 (60%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P + I L+ Y + I+EIVR+G++AVP+GQ +AA ALGLTH + R+VLLPQA RS+ Sbjct: 140 PPLWYIVIGLTAYNSVIISEIVRAGILAVPKGQRDAASALGLTHGQTLRIVLLPQAFRSM 199 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 +P L SQ + +LK++SL + + +L+ I I+ L+ I++ ++ ++ Sbjct: 200 LPALISQLVVILKDTSLGAFISYEELLRRALIAIQTLHNPIQTYLVIGGIFILINYLVTR 259 Query: 384 FMNRLNAKIALKEKK 398 L A+++ + + Sbjct: 260 LATYLEARLSGRRAR 274 >gi|300172545|ref|YP_003771710.1| glutamine ABC transporter permease [Leuconostoc gasicomitatum LMG 18811] gi|299886923|emb|CBL90891.1| glutamine ABC transporter permease component [Leuconostoc gasicomitatum LMG 18811] Length = 213 Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 50/127 (39%), Positives = 77/127 (60%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F S +AL YT+AFIAE VR+G+++V GQME A A GL+ +A + ++LPQA R +P Sbjct: 83 FTSGTVALMLYTSAFIAETVRAGILSVNGGQMEGARANGLSFAQAMQYIILPQAFRIALP 142 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 L +Q++NL+KNSS+ VG DL+ G + T +I YL L++ ++ ++ Sbjct: 143 SLGNQFINLVKNSSILAFVGGLDLMYQGNMVAANTFDTFSTYIIVAIFYLILTLPLSYYI 202 Query: 386 NRLNAKI 392 L K+ Sbjct: 203 QHLERKL 209 Score = 37.4 bits (85), Expect = 4.3, Method: Compositional matrix adjust. Identities = 22/60 (36%), Positives = 32/60 (53%) Query: 90 LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 L GF T + +I + I+GT ++ K I VYV+VFRNIP L++ FF + Sbjct: 12 LQGFGYTLLSSIIALIGSMILGTGFAIMQIVPQKWAQVIGNVYVQVFRNIPLLIITFFFF 71 >gi|330505355|ref|YP_004382224.1| putative permease of ABC transporter [Pseudomonas mendocina NK-01] gi|328919641|gb|AEB60472.1| putative permease of ABC transporter [Pseudomonas mendocina NK-01] Length = 221 Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 55/178 (30%), Positives = 97/178 (54%), Gaps = 17/178 (9%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 +++PLL + T+ F +P + L++ D PV G F+ S +A + Sbjct: 61 RSIPLLLVITWFYFAVPFI----LRWITGEDTPV-GAFS------------SCLVAFVMF 103 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 AA+ EIVR+G+ A+P+GQM AA ALG+T+ ++ RL++LPQA R + P L Q + L + Sbjct: 104 EAAYFCEIVRAGIQAIPKGQMGAASALGMTYGQSMRLIILPQAFRKMTPLLLQQSIILFQ 163 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394 ++SL VG D ++ + + GQ E ++ +Y ++S + + L ++A+ Sbjct: 164 DTSLVYTVGLMDFLNAARSRGDIIGQPHEFLIFAGLVYFTVSFAASRLVKLLQKRLAV 221 >gi|320177110|gb|EFW52126.1| Glutamate Aspartate transport system permease protein GltJ [Shigella dysenteriae CDC 74-1112] Length = 158 Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 46/130 (35%), Positives = 73/130 (56%) Query: 30 QIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAI 89 QI+ + + I W +N N+ ++ G FL AGF I Q ++ Y +Y Sbjct: 25 QILAVVAVVGIVGWLFHNTVTNLSNRGITSGFAFLDRGAGFGIVQHLIDYQQGDTYGRVF 84 Query: 90 LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 +VG +NT ++ ++ A+++G +G RLS N L+ + +Y+E+FRNIPPL+ IFF Y Sbjct: 85 IVGLLNTLLVSALCIVFASVLGFFIGLARLSDNWLLRKLSTIYIEIFRNIPPLLQIFFWY 144 Query: 150 KSVLSVLPIP 159 +VL LP P Sbjct: 145 FAVLRNLPGP 154 >gi|222082232|ref|YP_002541597.1| amino acid ABC transporter [Agrobacterium radiobacter K84] gi|221726911|gb|ACM30000.1| amino acid ABC transporter [Agrobacterium radiobacter K84] Length = 319 Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 65/193 (33%), Positives = 109/193 (56%), Gaps = 18/193 (9%) Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251 F VLG++L++ RLS+ ++ +L L+I + G P LV + Y L P L Sbjct: 86 FGIVLGLLLAV--ARLSK---DRLANSLASLFI--WFFRGTPLLVQLIFWYNLSTLFPTL 138 Query: 252 GQ--------FNFIGGSTVSPEFMSLYIA-LSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302 ++ S +SP M+ IA L+ AA++AEI+R GL++V +GQ E A A Sbjct: 139 SIGIPFGPTFMSWDTNSVISP--MTAAIAGLALNEAAYMAEIIRGGLLSVDKGQFETAEA 196 Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362 G+T +A +++PQAMRSI+PP +Q ++++K +SL + ADL+ +I N+T + Sbjct: 197 FGMTRARALSRIIIPQAMRSIVPPTGNQLISMIKATSLVSVIAMADLLYSVQSIYNRTFE 256 Query: 363 AIEIILIWMFIYL 375 + ++L+ + YL Sbjct: 257 VVPMLLVAVIWYL 269 >gi|187919126|ref|YP_001888157.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia phytofirmans PsJN] gi|187717564|gb|ACD18787.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia phytofirmans PsJN] Length = 222 Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 44/115 (38%), Positives = 77/115 (66%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P F+ + L Y+AA+++EIVR + +V RGQMEAA ++G++ +A R ++LPQA+ + Sbjct: 87 PAFVCGMLGLGLYSAAYVSEIVRGAIQSVDRGQMEAARSIGMSSGQAMRAIILPQAIVRM 146 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378 IPPL ++++ L+KNS+L + DL+ G II+ + +++E+ L +YL L+ Sbjct: 147 IPPLGNEFIALIKNSALVSLLTIDDLMHEGQKIISVSYRSLEVYLAIALVYLVLT 201 >gi|107021748|ref|YP_620075.1| amino acid ABC transporter permease [Burkholderia cenocepacia AU 1054] gi|170731991|ref|YP_001763938.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia cenocepacia MC0-3] gi|105891937|gb|ABF75102.1| L-aspartate ABC transporter membrane protein / L-glutamate ABC transporter membrane protein [Burkholderia cenocepacia AU 1054] gi|169815233|gb|ACA89816.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia cenocepacia MC0-3] Length = 225 Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 44/132 (33%), Positives = 77/132 (58%) Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320 T+ S +A S + AA+ +EI+R+G+ AVPRGQ+ AA ALG+ + +A RLV+LPQA Sbjct: 92 TIDIRLASAMVAFSLFEAAYYSEIIRAGIQAVPRGQVNAAFALGMNYAQAMRLVILPQAF 151 Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380 R+++P L +Q + L +++SL + AD + ++ G +E++L Y + + Sbjct: 152 RAMVPLLLTQAIVLFQDTSLVYVISLADFFRTAANVGDRDGTTVEMVLFAGACYFVICSL 211 Query: 381 IALFMNRLNAKI 392 + + L K+ Sbjct: 212 ASALVKGLQKKV 223 Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust. Identities = 21/58 (36%), Positives = 34/58 (58%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 G V TF + ++ + GTL+ RLS K +AW + YV VFR+IP ++V+ + + Sbjct: 19 GAVVTFKITLIAIVIGIVWGTLLALLRLSGVKPLAWFAKAYVTVFRSIPLVMVLLWFF 76 >gi|317491047|ref|ZP_07949483.1| inner membrane binding protein [Enterobacteriaceae bacterium 9_2_54FAA] gi|316920594|gb|EFV41917.1| inner membrane binding protein [Enterobacteriaceae bacterium 9_2_54FAA] Length = 254 Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 45/133 (33%), Positives = 79/133 (59%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+S +A++ A+++EI R+G+ ++ GQMEA+ ALG++ K R V+LPQA R I+P Sbjct: 122 FLSCIVAITLNAGAYVSEIFRAGIQSIDHGQMEASRALGMSWGKTMRKVILPQAFRRILP 181 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PL + + ++K+SSLA A+G ADL T+ E L IY L+ +++L + Sbjct: 182 PLGNNAIAIVKDSSLASAIGLADLAYAARTVSGAYATYWEPYLTISVIYWMLTFILSLLV 241 Query: 386 NRLNAKIALKEKK 398 + +++ + + Sbjct: 242 QHMEKRLSKSDSR 254 >gi|311106036|ref|YP_003978889.1| amino ABC transporter permease, 3-TM region, His/Glu/Gln/Arg/opine family domain-containing protein 6 [Achromobacter xylosoxidans A8] gi|310760725|gb|ADP16174.1| amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family domain protein 6 [Achromobacter xylosoxidans A8] Length = 222 Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 45/129 (34%), Positives = 81/129 (62%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P F + L Y+ A+++EIVR + +V RGQ EAA +LG++ +A R+++LPQA+ + Sbjct: 87 PAFACGVLGLGMYSGAYVSEIVRGAIQSVDRGQTEAARSLGMSSGQAMRIIVLPQAVVRM 146 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 IPPL ++++ L+KNS+L + DL+ G II+ + +++E L+ IYL L+ L Sbjct: 147 IPPLGNEFIALIKNSALVSLLTIHDLMHEGQKIISVSYRSLETYLVVALIYLILTTATML 206 Query: 384 FMNRLNAKI 392 + ++ ++ Sbjct: 207 VLRKVEHRL 215 Score = 40.4 bits (93), Expect = 0.46, Method: Compositional matrix adjust. Identities = 38/151 (25%), Positives = 69/151 (45%), Gaps = 17/151 (11%) Query: 88 AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAW-ICRVYVEVFRNIPPLVVIF 146 A++ G V T + ++ A +IG LVG GRL+ + V + +C VY+ +FR P LV +F Sbjct: 14 ALINGAVVTVEVTAGALLLACVIGLLVGVGRLNPKRYVIYNLCSVYLLLFRGTPLLVQLF 73 Query: 147 FLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL--FA 204 + +P I LP + L + + +V V G + S+ Sbjct: 74 IWF------FGLPHFGITLP--------AFACGVLGLGMYSGAYVSEIVRGAIQSVDRGQ 119 Query: 205 TRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235 T +R +G+A+ ++ + ++ +P L Sbjct: 120 TEAARSLGMSSGQAMRIIVLPQAVVRMIPPL 150 >gi|227820423|ref|YP_002824394.1| amino acid ABC transporter permease [Sinorhizobium fredii NGR234] gi|227339422|gb|ACP23641.1| probable amino acid ABC transporter, permease protein [Sinorhizobium fredii NGR234] Length = 323 Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 48/121 (39%), Positives = 75/121 (61%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +ALS A++ EI R+G+ ++PRGQ E A ALGL+ + LV+LPQAMR IIPP +Q Sbjct: 196 LALSLCYGAYMTEIFRAGIESIPRGQTEGATALGLSPAQTMGLVILPQAMRVIIPPTGNQ 255 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++ +LK+SSL VG +L+ + T + IE+++ IY LS+ + +R+ A Sbjct: 256 FIAMLKDSSLVSVVGVWELMYLARTQGQTEFRHIEMLITASMIYWLLSVCLEFLQSRIEA 315 Query: 391 K 391 + Sbjct: 316 R 316 >gi|311103231|ref|YP_003976084.1| amino ABC transporter permease, 3-TM region, His/Glu/Gln/Arg/opine family domain-containing protein 1 [Achromobacter xylosoxidans A8] gi|310757920|gb|ADP13369.1| amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family domain protein 1 [Achromobacter xylosoxidans A8] Length = 239 Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 49/129 (37%), Positives = 77/129 (59%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 PE + AL +TAA +A VRSG+ A+ RGQ AA A G+T +A R +LLPQA+R + Sbjct: 101 PEIWTAIAALGLFTAARVAVQVRSGIAALSRGQRLAAYASGMTLAQAYRYILLPQALRLV 160 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 +PP+TS++L + KNS+LA+ +G ++ + I + T E +YLS+++ + Sbjct: 161 LPPMTSEFLTVFKNSALALTIGVFEMTAQSRQIESYTFSGFEAFTAATLVYLSIALCVTA 220 Query: 384 FMNRLNAKI 392 M L K+ Sbjct: 221 GMRSLEKKL 229 Score = 37.0 bits (84), Expect = 5.5, Method: Compositional matrix adjust. Identities = 25/77 (32%), Positives = 39/77 (50%), Gaps = 3/77 (3%) Query: 82 DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGA-GRLSANKLVAWICRVYVEVFRNIP 140 + YA ++ G T ++ + A +IG +G G L + W+ VYV VFRN+P Sbjct: 13 EEPYAGWLISGLQATVLISLAAWAIAVVIGLALGVLGSLPGR--IRWLLTVYVSVFRNVP 70 Query: 141 PLVVIFFLYKSVLSVLP 157 LV +F + V +LP Sbjct: 71 LLVQLFIWFFVVPELLP 87 >gi|261823781|ref|YP_003261887.1| polar amino acid ABC transporter inner membrane protein [Pectobacterium wasabiae WPP163] gi|261607794|gb|ACX90280.1| polar amino acid ABC transporter, inner membrane subunit [Pectobacterium wasabiae WPP163] Length = 247 Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 43/85 (50%), Positives = 62/85 (72%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 EF++ L+ Y++AFIAE +RSG+ V GQ AA ALGLT ++ R V+LPQA++ + Sbjct: 115 EFLAGLAGLTLYSSAFIAEEIRSGIRGVAHGQKYAAQALGLTGWQSMRYVVLPQALKIAL 174 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADL 349 PPL QY+N++KNSSL +A+G A+L Sbjct: 175 PPLLGQYMNIVKNSSLTMAIGVAEL 199 Score = 36.6 bits (83), Expect = 6.5, Method: Compositional matrix adjust. Identities = 48/194 (24%), Positives = 83/194 (42%), Gaps = 32/194 (16%) Query: 84 SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143 Y T + GF+ T L+ ++ +T+ G L+ A R S ++ + Y +FRN P LV Sbjct: 16 QYLTWLWHGFLITLGLSLGTVVLSTVSGFLLAAARDSQIHVLRGVVVAYSSLFRNTPLLV 75 Query: 144 VIFFLYKSVLSVLPIP-DHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIV-LS 201 +FF Y + P + P + L L++P+ F F+ G+ L+ Sbjct: 76 QLFFWYFGAGQLFPSEMMQWLNAPHAISLLGMTLAWPS-----------FEFLAGLAGLT 124 Query: 202 LFAT-----------RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 L+++ R H + +AL L + LP + IAL P+ Sbjct: 125 LYSSAFIAEEIRSGIRGVAHGQKYAAQALGLTGWQSMRYVVLPQALKIAL-------PPL 177 Query: 251 LGQF-NFIGGSTVS 263 LGQ+ N + S+++ Sbjct: 178 LGQYMNIVKNSSLT 191 >gi|209547236|ref|YP_002279154.1| polar amino acid ABC transporter inner membrane protein [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209538480|gb|ACI58414.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 318 Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 67/195 (34%), Positives = 107/195 (54%), Gaps = 15/195 (7%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 V + ++G VL L ++R + +L L+I F G P LV + Y L P Sbjct: 81 VVAMIIGTVLGLLLA-VARMSKDHLASSLASLFIWFFR--GTPLLVQLIFWYNLSTLFPT 137 Query: 251 LG-QFNFIG--------GSTVSPEFMSLYIA-LSCYTAAFIAEIVRSGLIAVPRGQMEAA 300 L F G S +SP M+ IA L+ +A++AEI+R GL++V +GQ E A Sbjct: 138 LSIGIPFFGPTFASWDTNSVISP--MTAAIAGLALNESAYMAEIIRGGLLSVDKGQFETA 195 Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 A G+T +A R +++PQAMRSI+PP +Q ++++K +SL + ADL+ +I N+T Sbjct: 196 EAFGMTRARALRRIIIPQAMRSIVPPTGNQLISMIKATSLVSVIAMADLLYSVQSIYNRT 255 Query: 361 GQAIEIILIWMFIYL 375 + I ++L+ + YL Sbjct: 256 FEVIPMLLVAVTWYL 270 >gi|238791255|ref|ZP_04634894.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Yersinia intermedia ATCC 29909] gi|238729388|gb|EEQ20903.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Yersinia intermedia ATCC 29909] Length = 255 Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 42/133 (31%), Positives = 79/133 (59%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+S +A++ A+++EI R+G+ ++ RGQMEA+ +LG+++ K R V+LPQA R ++P Sbjct: 122 FLSCVVAITLNAGAYVSEIFRAGIQSIDRGQMEASRSLGMSYGKTMRKVILPQAFRRMLP 181 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PL + + ++K+SSLA A+G ADL T+ E L +Y ++ +++L + Sbjct: 182 PLGNNAIAIVKDSSLASAIGLADLAYAARTVSGAYATYWEPYLTISLVYWVITFLLSLLV 241 Query: 386 NRLNAKIALKEKK 398 + + + + Sbjct: 242 RHMEKRFGKSDSR 254 >gi|116750585|ref|YP_847272.1| polar amino acid ABC transporter inner membrane subunit [Syntrophobacter fumaroxidans MPOB] gi|116699649|gb|ABK18837.1| polar amino acid ABC transporter, inner membrane subunit [Syntrophobacter fumaroxidans MPOB] Length = 240 Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 61/189 (32%), Positives = 101/189 (53%), Gaps = 13/189 (6%) Query: 204 ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVS 263 A RL + +T + +PLL F F +P+L+ + L+ + + +++ G Sbjct: 55 AARLVGGAYVETLRNIPLLVQLFFWYFAVPSLLPGKTERWLYAN---VRDLSYVLG---- 107 Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 +AL YTAA +AE VRSGL+AVP GQ AA++ GL+ R V+LP A+R + Sbjct: 108 ------VLALGTYTAARVAEAVRSGLLAVPAGQFRAALSTGLSPAGTYRHVILPYALRVV 161 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 IP L++++L KNSSLA+ +G + + I + T +E +YL S+ + + Sbjct: 162 IPLLSTEFLTCFKNSSLAMTIGVMETTGMANYIDSFTFHGLETTTAASLVYLLTSLSVIV 221 Query: 384 FMNRLNAKI 392 M R+ +K+ Sbjct: 222 LMGRIESKM 230 >gi|163789533|ref|ZP_02183971.1| hypothetical protein CAT7_08825 [Carnobacterium sp. AT7] gi|159875065|gb|EDP69131.1| hypothetical protein CAT7_08825 [Carnobacterium sp. AT7] Length = 483 Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 62/204 (30%), Positives = 113/204 (55%), Gaps = 17/204 (8%) Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249 F+ + +LG++ LF+ ++ + +I+T + L + LI L + ++F P Sbjct: 295 FIIATILGVIFGLFSASPNKVLN----------WIATIYVDILRGIPLIVLAFFIYFSIP 344 Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309 QF I P +++ I LS T A+IAE+VR G+ AV GQ+EA+ +LGLT+ Sbjct: 345 ---QFLNI----QIPAYLAGVITLSLNTTAYIAELVRGGIQAVDNGQLEASRSLGLTYNT 397 Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369 + R V+LPQA++ +IP +Q++ LK++S+ +G +L G II +T + ++ LI Sbjct: 398 SMRKVVLPQAVKIMIPSFINQFVITLKDTSILSVIGIVELTQTGKIIIARTYSSGDMWLI 457 Query: 370 WMFIYLSLSIMIALFMNRLNAKIA 393 +Y+ + ++ F N L +++ Sbjct: 458 VGLMYIIIITILTKFSNYLERRLS 481 Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 27/70 (38%), Positives = 40/70 (57%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G T L + I ATI+G + G S NK++ WI +YV++ R IP +V+ FF+ Sbjct: 280 LLKGLGRTLLLTITAFIIATILGVIFGLFSASPNKVLNWIATIYVDILRGIPLIVLAFFI 339 Query: 149 YKSVLSVLPI 158 Y S+ L I Sbjct: 340 YFSIPQFLNI 349 >gi|213647380|ref|ZP_03377433.1| glutamate/aspartate ABC transporter, permease protein GltK [Salmonella enterica subsp. enterica serovar Typhi str. J185] Length = 151 Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 43/127 (33%), Positives = 79/127 (62%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 +S +A S + AA+ +EI+R+G+ ++ RGQ AA+ALG+TH ++ +L++LPQA R+++ Sbjct: 23 RLISAMVAFSMFEAAYYSEIIRAGIQSISRGQSSAALALGMTHWQSMKLIILPQAFRAMV 82 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 P L +Q + L +++SL + AD TI + G +E+IL +Y +S+ +L Sbjct: 83 PLLLTQGIVLFQDTSLVYVLSLADFFRTASTIGERDGTQVEMILFAGAVYFVISLSASLL 142 Query: 385 MNRLNAK 391 ++ L + Sbjct: 143 VSYLKKR 149 >gi|157369068|ref|YP_001477057.1| polar amino acid ABC transporter inner membrane subunit [Serratia proteamaculans 568] gi|157320832|gb|ABV39929.1| polar amino acid ABC transporter, inner membrane subunit [Serratia proteamaculans 568] Length = 254 Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 43/133 (32%), Positives = 78/133 (58%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+S +A++ A+++EI R+G+ ++ RGQMEA+ +LG+ + K R V+LPQA R ++P Sbjct: 121 FLSCVVAITLNAGAYVSEIFRAGIQSIDRGQMEASRSLGMGYGKTMRKVILPQAFRRMLP 180 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PL + + ++K+SSLA A+G ADL T+ E L +Y L+ +++L + Sbjct: 181 PLGNNAIAIVKDSSLASAIGLADLAYAARTVSGAYATYWEPYLTISLVYWVLTFLLSLMV 240 Query: 386 NRLNAKIALKEKK 398 + + + + Sbjct: 241 QHMEKRFGKSDSR 253 >gi|116688694|ref|YP_834317.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia cenocepacia HI2424] gi|116646783|gb|ABK07424.1| L-aspartate ABC transporter membrane protein / L-glutamate ABC transporter membrane protein [Burkholderia cenocepacia HI2424] Length = 226 Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 41/108 (37%), Positives = 69/108 (63%) Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320 T+ S +A S + AA+ +EI+R+G+ AVPRGQ+ AA ALG+ + +A RLV+LPQA Sbjct: 93 TIDIRLASAMVAFSLFEAAYYSEIIRAGIQAVPRGQVNAAFALGMNYAQAMRLVILPQAF 152 Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368 R+++P L +Q + L +++SL + AD + ++ G +E++L Sbjct: 153 RAMVPLLLTQAIVLFQDTSLVYVISLADFFRTAANVGDRDGTTVEMVL 200 Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust. Identities = 21/58 (36%), Positives = 34/58 (58%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 G V TF + ++ + GTL+ RLS K +AW + YV VFR+IP ++V+ + + Sbjct: 20 GAVVTFKITLIAIVIGIVWGTLLALLRLSGVKPLAWFAKAYVTVFRSIPLVMVLLWFF 77 >gi|302558467|ref|ZP_07310809.1| arginine/ornithine transporter [Streptomyces griseoflavus Tu4000] gi|302476085|gb|EFL39178.1| arginine/ornithine transporter [Streptomyces griseoflavus Tu4000] Length = 326 Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 45/122 (36%), Positives = 75/122 (61%), Gaps = 3/122 (2%) Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 AA+++EI R+GL++V GQ EA+ ALG++H K R +++PQAMR I+PP ++ +N+LK Sbjct: 181 AAYMSEICRAGLLSVDEGQTEASHALGMSHTKTLRRIVVPQAMRVIVPPTGNEVINMLKT 240 Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILI---WMFIYLSLSIMIALFMNRLNAKIAL 394 +SL AV FADL I +G +E+ + W I S+ + ++ R A+ ++ Sbjct: 241 TSLVSAVQFADLFQEAKDIGQNSGSPVEMYFLAAAWYLIMTSILSVGQYYIERHYARGSV 300 Query: 395 KE 396 + Sbjct: 301 RS 302 >gi|24379640|ref|NP_721595.1| putative amino acid ABC transporter, permease protein [Streptococcus mutans UA159] gi|24377593|gb|AAN58901.1|AE014958_5 putative amino acid ABC transporter, permease protein [Streptococcus mutans UA159] Length = 217 Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 72/230 (31%), Positives = 116/230 (50%), Gaps = 18/230 (7%) Query: 169 MFLNN----RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224 MF+N + LSF + I V SF+ G +L +F + L R ++L +YI Sbjct: 1 MFINFHLIIKSLSFVLTGIPYTLGISVLSFLTGCLLGIFISFL-RMSQNSWLRSLARIYI 59 Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284 S ++ G+P LV++ + L+F P P + YI S ++A+I+EI Sbjct: 60 S--IMRGVPMLVVL---FVLYFGLPYF--------EVQLPALLCAYIGFSAVSSAYISEI 106 Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344 R+ + AV +GQ EAA ALGL + ++LPQA R I PL + L++LK+SSLA + Sbjct: 107 FRASISAVDKGQWEAAGALGLPMTSILKSIILPQAFRIAIAPLGNVMLDMLKSSSLAAMI 166 Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394 D+ I + + + ++ FIY L + +F N L AK+++ Sbjct: 167 TVPDIFQNAKIIGGREYDYMSMYILIAFIYWLLCFLFEMFQNHLEAKLSV 216 >gi|170288144|ref|YP_001738382.1| polar amino acid ABC transporter, inner membrane subunit [Thermotoga sp. RQ2] gi|281411812|ref|YP_003345891.1| polar amino acid ABC transporter, inner membrane subunit [Thermotoga naphthophila RKU-10] gi|170175647|gb|ACB08699.1| polar amino acid ABC transporter, inner membrane subunit [Thermotoga sp. RQ2] gi|281372915|gb|ADA66477.1| polar amino acid ABC transporter, inner membrane subunit [Thermotoga naphthophila RKU-10] Length = 216 Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 61/178 (34%), Positives = 97/178 (54%), Gaps = 30/178 (16%) Query: 217 KALPLLYISTFLI-FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSC 275 + PL+ + FL+ FGLP L L FD+ F + IAL Sbjct: 63 RGTPLM-VQLFLVYFGLPEL-------GLEFDR-----------------FTAAVIALGI 97 Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335 + A++AEIVR+G+ +VP+GQ EAA +LG++H +A V+LPQA R I+P L ++++ L Sbjct: 98 NSGAYVAEIVRAGIQSVPKGQYEAARSLGMSHAQAMIYVILPQAFRHILPALGNEFIALA 157 Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEI----ILIWMFIYLSLSIMIALFMNRLN 389 K+SSLA+ +G +L+ I+++T + I LI+ I S+S ++ RL Sbjct: 158 KDSSLAMVIGTVELMRSAQYIVSRTFMSFPIYGGVALIYFAITFSVSRLVKFVEGRLK 215 Score = 38.1 bits (87), Expect = 2.5, Method: Compositional matrix adjust. Identities = 21/61 (34%), Positives = 33/61 (54%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G ++T L ++ IG VG GRLS +++ + VYVE R P +V +F + Sbjct: 15 LLKGALSTLQLTSLAVLIGLAIGIFVGMGRLSKYRIIRYPSSVYVEFLRGTPLMVQLFLV 74 Query: 149 Y 149 Y Sbjct: 75 Y 75 >gi|15643358|ref|NP_228402.1| amino acid ABC transporter, permease protein [Thermotoga maritima MSB8] gi|4981111|gb|AAD35677.1|AE001734_4 amino acid ABC transporter, permease protein [Thermotoga maritima MSB8] Length = 216 Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 61/178 (34%), Positives = 97/178 (54%), Gaps = 30/178 (16%) Query: 217 KALPLLYISTFLI-FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSC 275 + PL+ + FL+ FGLP L L FD+ F + IAL Sbjct: 63 RGTPLM-VQLFLVYFGLPEL-------GLEFDR-----------------FTAAVIALGI 97 Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335 + A++AEIVR+G+ +VP+GQ EAA +LG++H +A V+LPQA R I+P L ++++ L Sbjct: 98 NSGAYVAEIVRAGIQSVPKGQYEAARSLGMSHAQAMIYVILPQAFRHILPALGNEFIALA 157 Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEI----ILIWMFIYLSLSIMIALFMNRLN 389 K+SSLA+ +G +L+ I+++T + I LI+ I S+S ++ RL Sbjct: 158 KDSSLAMVIGTVELMRSAQYIVSRTFMSFPIYGGVALIYFAITFSVSRLVKFVEGRLK 215 Score = 37.7 bits (86), Expect = 3.0, Method: Compositional matrix adjust. Identities = 21/61 (34%), Positives = 32/61 (52%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G + T L ++ IG VG GRLS +++ + VYVE R P +V +F + Sbjct: 15 LLKGALRTLQLTSLAVLIGLAIGIFVGMGRLSKYRIIRYPSSVYVEFLRGTPLMVQLFLV 74 Query: 149 Y 149 Y Sbjct: 75 Y 75 >gi|322384242|ref|ZP_08057951.1| amino acid ABC transporter permease-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321150890|gb|EFX44316.1| amino acid ABC transporter permease-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 175 Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 43/129 (33%), Positives = 83/129 (64%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P +S AL+ +AA++AEI R+G+ ++ +GQMEAA +LG+TH A +L+++PQA+R+I Sbjct: 44 PGMVSGIAALTLNSAAYVAEIFRAGIESIDKGQMEAARSLGMTHNMAMKLIIIPQAIRNI 103 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 +P L ++++ ++K SS+ VG DL+ T+ T +A E +++ +Y ++ ++ Sbjct: 104 LPALGNEFIVIIKESSIVSIVGITDLMFNADTVRGVTYKAFEPLIVAAVVYFIMTFTLSK 163 Query: 384 FMNRLNAKI 392 + + +I Sbjct: 164 LLGKFERRI 172 >gi|255067574|ref|ZP_05319429.1| polar amino amino acid ABC transporter, PAAT family, permease protein [Neisseria sicca ATCC 29256] gi|255048195|gb|EET43659.1| polar amino amino acid ABC transporter, PAAT family, permease protein [Neisseria sicca ATCC 29256] Length = 248 Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 48/121 (39%), Positives = 74/121 (61%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +AL + A+I EI R+G+ ++ RGQMEAA +LGLT+ +A R V+LPQA+R ++PPL S+ Sbjct: 122 LALIANSGAYICEIFRAGIQSIDRGQMEAARSLGLTYPQAMRYVILPQALRRMLPPLASE 181 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++ LLK+SSL + A+L V TI + E + IYL ++ + RL Sbjct: 182 FITLLKDSSLLSVIAVAELAYVQSTISGRYSVYEEPLYTVALIYLLMTTFLGWVFLRLEN 241 Query: 391 K 391 + Sbjct: 242 R 242 >gi|49082214|gb|AAT50507.1| PA1341 [synthetic construct] Length = 249 Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 49/129 (37%), Positives = 77/129 (59%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 ++S+ + L +TAA + E VR+G+ A+P GQ AA A+G + R VLLPQA R IIP Sbjct: 111 YLSVVVCLGLFTAARVCEQVRTGIQALPYGQTSAARAMGFRLPQIYRHVLLPQAFRIIIP 170 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PLTS++LN+ KNSS+A +G +L++ + E + IY +L++ + L M Sbjct: 171 PLTSEFLNIFKNSSVASLIGLMELLAQTKQTAEFSANLFEAFTLATLIYFTLNMSLMLIM 230 Query: 386 NRLNAKIAL 394 + K+A+ Sbjct: 231 RLVERKVAV 239 Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust. Identities = 29/77 (37%), Positives = 41/77 (53%) Query: 81 SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140 +Y + G T +A G I A +G+L+G R N+LV+ I YVE+FRN+P Sbjct: 17 GSETYLDWCIAGLGWTIAIALVGWIIALALGSLLGVMRTVPNRLVSGIATAYVEIFRNVP 76 Query: 141 PLVVIFFLYKSVLSVLP 157 LV +F Y V +LP Sbjct: 77 LLVQLFIWYFLVPDLLP 93 >gi|50121892|ref|YP_051059.1| ABC transporter permease [Pectobacterium atrosepticum SCRI1043] gi|49612418|emb|CAG75868.1| ABC transporter permease protein [Pectobacterium atrosepticum SCRI1043] Length = 225 Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 57/191 (29%), Positives = 105/191 (54%), Gaps = 12/191 (6%) Query: 215 TGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGS-------TVSPEFM 267 G L + +S L+ LP ++LI + + P + F +I + T SP F Sbjct: 38 AGMVLAAMKMSPRLLLRLPAVMLIGF----YRNTPAIVHFFWIYYALPVITPLTFSP-FT 92 Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327 + IALS + AF AE+ R + ++ GQ E A ALG+ A R V+LPQA+R +IPP Sbjct: 93 AAVIALSAQSGAFYAEVYRGAISSIHPGQWEGAKALGMPQSTALRRVILPQALRRMIPPF 152 Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387 + L+K++SLA ++ +++L+ + +QT + +E+ + +Y +L ++I+LF Sbjct: 153 IERSFELIKSTSLASSLAYSELLYQAMQLNSQTYRPLEVYSLVAVMYFTLLLLISLFSQH 212 Query: 388 LNAKIALKEKK 398 + +++L +++ Sbjct: 213 IEKRLSLADRR 223 >gi|260597070|ref|YP_003209641.1| glutamate/aspartate transport system permease GltK [Cronobacter turicensis z3032] gi|260216247|emb|CBA29163.1| Glutamate/aspartate transport system permease protein gltK [Cronobacter turicensis z3032] Length = 225 Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 45/134 (33%), Positives = 83/134 (61%), Gaps = 4/134 (2%) Query: 262 VSPE----FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317 +SP+ +S +A S + AA+ +EI+R+G+ ++ RGQ AA+ALG+TH ++ +L++LP Sbjct: 90 ISPKTDIRLISAMVAFSMFEAAYYSEIIRAGIQSISRGQSSAALALGMTHWQSMKLIILP 149 Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377 QA R+++P L +Q + L +++SL + AD TI + G +E+IL +Y + Sbjct: 150 QAFRAMVPLLLTQGIVLFQDTSLVYVLSLADFFRTASTIGERDGTQVEMILFAGAVYFVI 209 Query: 378 SIMIALFMNRLNAK 391 S+ +L ++ L + Sbjct: 210 SLSASLLVSWLKKR 223 Score = 45.1 bits (105), Expect = 0.018, Method: Compositional matrix adjust. Identities = 38/112 (33%), Positives = 54/112 (48%), Gaps = 17/112 (15%) Query: 70 FEIDQG-IVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWI 128 +E D G IVP +L G V T + + +I + GTL+ RLSA K AW Sbjct: 3 YEFDWGSIVPSMP------YLLAGLVITLKITVTAVIFGIVWGTLLAVMRLSAFKPFAWF 56 Query: 129 CRVYVEVFRNIPPLVVIFFLY-------KSVLSVLPIPD---HSIVLPFGMF 170 YV VFR+IP ++V+ + Y + VL + P D S ++ F MF Sbjct: 57 ATAYVNVFRSIPLVMVLLWFYLIVPGILQDVLGISPKTDIRLISAMVAFSMF 108 >gi|170742664|ref|YP_001771319.1| polar amino acid ABC transporter inner membrane subunit [Methylobacterium sp. 4-46] gi|168196938|gb|ACA18885.1| polar amino acid ABC transporter, inner membrane subunit [Methylobacterium sp. 4-46] Length = 240 Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 48/133 (36%), Positives = 79/133 (59%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + + L +TA+ +AE VR+G+ A+PRGQ A ALGLT + R VLLP A R I+P Sbjct: 108 FYTAVVCLGFFTASRVAEQVRAGIQALPRGQRMAGTALGLTTSQTYRYVLLPNAYRIILP 167 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PLTS++LN LKN+S+A+ +G +L + ++ + Q E +Y+ +++++ Sbjct: 168 PLTSEFLNNLKNTSVALTIGLLELTARARSMQEFSFQVFEAFTAATILYIIINLLVVTAA 227 Query: 386 NRLNAKIALKEKK 398 L K+A+ + Sbjct: 228 GYLERKVAIPGAR 240 Score = 39.7 bits (91), Expect = 0.91, Method: Compositional matrix adjust. Identities = 30/104 (28%), Positives = 49/104 (47%), Gaps = 12/104 (11%) Query: 83 SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142 +YA +L G + T A + A +G+++G R N+ YVE+FRNIP L Sbjct: 19 GTYADMLLSGLLWTIVTALCAWVIAFAVGSVIGVMRTLPNRFAQAFGNGYVELFRNIPLL 78 Query: 143 VVIFFLYKSVLSVLP---------IPD---HSIVLPFGMFLNNR 174 V +F + + +LP +PD ++ V+ G F +R Sbjct: 79 VQMFLWFFVLPEMLPQSWGTWLKQLPDAPFYTAVVCLGFFTASR 122 >gi|293395619|ref|ZP_06639902.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Serratia odorifera DSM 4582] gi|291421938|gb|EFE95184.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Serratia odorifera DSM 4582] Length = 220 Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 65/218 (29%), Positives = 114/218 (52%), Gaps = 18/218 (8%) Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240 LT+ + VLG VL+L RLSR + PL ++S + LIA Sbjct: 21 LTLQLSLGGMALGLVLGFVLALM--RLSRFW--------PLSWLSRIYVSLFRGTPLIAQ 70 Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300 + +++ P QF G + P F + I LS TAA+ +E +R+ + ++ +GQ EAA Sbjct: 71 LFMIYYGLP---QF----GIELDP-FPAALIGLSLNTAAYTSETLRAAIASIDKGQWEAA 122 Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 ++G+T + R V+LPQA R+ +PPL + ++ L+K++SLA + +L I ++T Sbjct: 123 ASIGMTPWQTLRRVILPQAARTALPPLGNSFIGLVKDTSLAATIQVPELFRQAQLITSRT 182 Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 + + L IY ++ +++ NRL A + ++K+ Sbjct: 183 LEVFTMYLAASLIYWVMATLLSALQNRLEAHVNRQDKE 220 Score = 37.7 bits (86), Expect = 3.3, Method: Compositional matrix adjust. Identities = 19/61 (31%), Positives = 34/61 (55%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G + T L+ GM ++G ++ RLS ++W+ R+YV +FR P + +F + Sbjct: 15 LLKGAILTLQLSLGGMALGLVLGFVLALMRLSRFWPLSWLSRIYVSLFRGTPLIAQLFMI 74 Query: 149 Y 149 Y Sbjct: 75 Y 75 >gi|282856550|ref|ZP_06265824.1| gln/Arg/Lys/His-binding protein and permease protein [Pyramidobacter piscolens W5455] gi|282585616|gb|EFB90910.1| gln/Arg/Lys/His-binding protein and permease protein [Pyramidobacter piscolens W5455] Length = 521 Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 70/200 (35%), Positives = 102/200 (51%), Gaps = 33/200 (16%) Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247 K+ V + L IVL L ++R F K L YI ++ G P L+ QL F Sbjct: 306 KVSVCAMSLAIVLGLLLA-IARLFAPKILSRLATAYIE--IVRGTPVLI------QLFF- 355 Query: 248 KPVLGQFNFIG----GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 F G G +SP FM+ I L AA+ AE R+GL+AVPR QME A+AL Sbjct: 356 -------IFYGLPNIGIKLSP-FMAGVIGLGMNYAAYEAENYRAGLMAVPRAQMEGALAL 407 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363 G+ ++A R V++PQA+R +PP+T+ +++LLK+SSL + DL G + N Sbjct: 408 GMDKKQALRYVVIPQAVRVSLPPVTNDFISLLKDSSLVSMITLIDLTKAYGQLANT---- 463 Query: 364 IEIILIWMFIYLSLSIMIAL 383 + Y + IM+A+ Sbjct: 464 -------YYDYFGIGIMVAV 476 >gi|288936956|ref|YP_003441015.1| polar amino acid ABC transporter inner membrane subunit [Klebsiella variicola At-22] gi|288891665|gb|ADC59983.1| polar amino acid ABC transporter, inner membrane subunit [Klebsiella variicola At-22] Length = 253 Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 55/173 (31%), Positives = 95/173 (54%), Gaps = 11/173 (6%) Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286 +L+ G+P ++++ Y F P+L N G F ++ L Y +A+IAEIVR Sbjct: 69 YLLRGIPLMMVVFWTY---FCVPLLIGHNISG-------FSTMLCTLVIYESAYIAEIVR 118 Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346 G+ A+P GQ EA+ ALG+ H +A RLV+LPQA+ + +P L SQ ++++K+S+L + Sbjct: 119 GGIQALPSGQYEASRALGMGHVRALRLVILPQALYNALPSLVSQLVSIIKDSTLGYVINV 178 Query: 347 ADLVSVGGTIINQ-TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 +L + NQ + ++ I Y ++ + NRL +IA + ++ Sbjct: 179 PELTYAANQVSNQLLTKPFQVFAIVALSYYIINFSLTWLANRLELRIASRRQR 231 >gi|78065233|ref|YP_368002.1| ABC amino acid transporter, inner membrane subunit [Burkholderia sp. 383] gi|77965978|gb|ABB07358.1| L-glutamate ABC transporter membrane protein / L-aspartate ABC transporter membrane protein [Burkholderia sp. 383] Length = 225 Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 45/132 (34%), Positives = 76/132 (57%) Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320 T+ S +A S + AA+ +EI+R+G+ AVPRGQ AA ALG+ + +A RLV+LPQA Sbjct: 92 TIDIRLASAMVAFSLFEAAYYSEIIRAGIQAVPRGQANAAFALGMNYAQAMRLVILPQAF 151 Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380 R+++P L +Q + L +++SL + AD I ++ G +E++L Y + + Sbjct: 152 RAMVPLLLTQAIVLFQDTSLVYVISLADFFRTAANIGDRDGTTVEMVLFAGACYFVICSL 211 Query: 381 IALFMNRLNAKI 392 + + L K+ Sbjct: 212 ASALVKGLQKKV 223 Score = 38.9 bits (89), Expect = 1.5, Method: Compositional matrix adjust. Identities = 21/58 (36%), Positives = 34/58 (58%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 G V TF + ++ + GTL+ RLS K +AW + YV VFR+IP ++V+ + + Sbjct: 19 GAVVTFQITLIAIVVGIVWGTLLALMRLSGVKPLAWFAQGYVTVFRSIPLVMVLLWFF 76 >gi|251782901|ref|YP_002997204.1| arginine transport system permease [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|242391531|dbj|BAH81990.1| arginine transport system permease protein [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|322412233|gb|EFY03141.1| Putative amino acid ABC transporter [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957] Length = 228 Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 62/220 (28%), Positives = 122/220 (55%), Gaps = 22/220 (10%) Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF---GLPTLVL 237 +T+ +A + F ++G++++L K + PL ++ ++ G P +V Sbjct: 19 VTIMISASVVFFGTIIGVLVTLI----------KRTQIKPLTWLVNTYVWIFRGTPMVVQ 68 Query: 238 IALKYQ-LHFDKPVLGQFNFIGGSTVSPEFMSLY---IALSCYTAAFIAEIVRSGLIAVP 293 I + + +HF+ Q IG ++ +F L I +S + A+I+EIVR+G+ AVP Sbjct: 69 IMIAFAWMHFN-----QMPTIGFGVLNLDFSRLLPGIIIISLNSGAYISEIVRAGIEAVP 123 Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353 +GQ+EAA +LG+ R A R V+LPQA ++I+P L ++++ ++K+S+L +G +L + Sbjct: 124 KGQLEAAYSLGIRPRNAMRYVILPQAFKNILPALGNEFITIIKDSALLQTIGVMELWNGA 183 Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393 ++ T I +L+ F YL ++ +++ + L ++A Sbjct: 184 QSVATATYSPIAPLLVAAFYYLMVTTVLSQLLAVLERRMA 223 >gi|116255125|ref|YP_770959.1| putative permease component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] gi|115259773|emb|CAK02865.1| putative permease component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] Length = 313 Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 58/158 (36%), Positives = 89/158 (56%), Gaps = 8/158 (5%) Query: 231 GLPTLVLIALKYQLH-------FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283 G P LV + + Y L P +G + + + +S +ALS + A ++AE Sbjct: 116 GTPALVQLIIWYNLSIVVKDITLWLPGVGTVYSVSTNDIMTPLVSAIVALSLHEAGYMAE 175 Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343 IVRSGL +V +GQ EA+ LG+ A R ++LPQAMR IIPP ++ +NLLK +SL Sbjct: 176 IVRSGLKSVNKGQYEASACLGMNPSLALRRIVLPQAMRIIIPPTGNETINLLKTTSLVSI 235 Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLS-LSIM 380 + DL+ +I +T + I ++L+ F YL+ +SIM Sbjct: 236 IAVGDLLYSAQSIYARTFETIPLLLVVSFWYLAVVSIM 273 >gi|150398046|ref|YP_001328513.1| polar amino acid ABC transporter inner membrane subunit [Sinorhizobium medicae WSM419] gi|150029561|gb|ABR61678.1| polar amino acid ABC transporter, inner membrane subunit [Sinorhizobium medicae WSM419] Length = 323 Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 86/277 (31%), Positives = 138/277 (49%), Gaps = 19/277 (6%) Query: 117 GRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGL 176 GRL + ++A I + + R +P I ++ + +L I +S L F F+ + Sbjct: 57 GRLVSAVMIAVIAALNWKALRQLPRHWQITGVWLELFVLLMIFFYSFNLSFA-FIAKKIS 115 Query: 177 SFPTLTMDTNAKIFVFSFVLGIVLSLFAT--RLSRHFHEKTGKALPLLYISTFLIFGLPT 234 + + T I V S + V++L +LSR+ G L T L GLP Sbjct: 116 FLISQGVVTTLYISVISIAVATVIALLGAIAKLSRN-----GVIYGLATFYTSLFRGLPL 170 Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294 L+ I Y ++ P +G S V ++L + CY A++ EI R+G+ ++PR Sbjct: 171 LMQI---YIIYLGLPQVGYVI----SAVPAGILALSL---CY-GAYMTEIFRAGIESIPR 219 Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354 GQ E A ALGL+ + LV+LPQAMR IIPP +Q++ +LK+SSL VG +L+ + Sbjct: 220 GQSEGATALGLSPSQTMGLVILPQAMRVIIPPTGNQFIAMLKDSSLISVVGVWELMYLAR 279 Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 T + IE+++ IY LSI + +R+ A+ Sbjct: 280 TQGQTEFRHIEMLITASMIYWILSIGLEFIQSRIEAR 316 >gi|238920804|ref|YP_002934319.1| polar amino acid ABC transporter, inner membrane subunit [Edwardsiella ictaluri 93-146] gi|238870373|gb|ACR70084.1| polar amino acid ABC transporter, inner membrane subunit [Edwardsiella ictaluri 93-146] Length = 246 Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 47/129 (36%), Positives = 77/129 (59%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+S + L +TAA I E VR+ + ++P GQ A +A+G T + R VLLP A R I+P Sbjct: 111 FVSSLLCLGLFTAARICEQVRAAIQSLPAGQRSAGLAMGFTLPQTYRYVLLPNAYRVIVP 170 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PLTS+ LNL+KNS++A +G D+ + G +++ + A E Y++++ ++ L M Sbjct: 171 PLTSEMLNLVKNSAIASTIGLMDMAAQAGKLLDYSAHAYESFTAITLAYIAINALLMLGM 230 Query: 386 NRLNAKIAL 394 + L + L Sbjct: 231 HLLERHLQL 239 Score = 39.7 bits (91), Expect = 0.92, Method: Compositional matrix adjust. Identities = 25/75 (33%), Positives = 42/75 (56%) Query: 83 SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142 ++Y I G T L+ + + A ++G+L+G R ++ +A I +YVE+FRN+P + Sbjct: 19 TTYLGWIWSGMQVTIALSLAAWVIAFVLGSLLGILRTLPSRPLAMIGAIYVELFRNVPLI 78 Query: 143 VVIFFLYKSVLSVLP 157 V F Y V +LP Sbjct: 79 VQFFTWYLVVPELLP 93 >gi|186477319|ref|YP_001858789.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia phymatum STM815] gi|184193778|gb|ACC71743.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia phymatum STM815] Length = 225 Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 46/140 (32%), Positives = 83/140 (59%), Gaps = 1/140 (0%) Query: 255 NFIG-GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313 N +G + + S +A S + AA+ +EI+R+G+ AVPRGQ+ A+ ALG+++ +A RL Sbjct: 85 NVLGLSADIDIRLASAMVAFSLFEAAYYSEIIRAGIQAVPRGQVNASYALGMSYPQAMRL 144 Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI 373 V+LPQA R+++P L +Q + L +++SL + AD I ++ G +E++L Sbjct: 145 VVLPQAFRAMVPLLLTQAIVLFQDTSLVYVISLADFFRTATNIGDRDGTNVEMVLFAGAC 204 Query: 374 YLSLSIMIALFMNRLNAKIA 393 Y + ++ + + L K+A Sbjct: 205 YFVICVVASSLVKSLQKKVA 224 >gi|28899840|ref|NP_799445.1| putative amino acid ABC transporter permease [Vibrio parahaemolyticus RIMD 2210633] gi|153839888|ref|ZP_01992555.1| ABC-type glutamine transport system, permease component [Vibrio parahaemolyticus AQ3810] gi|260361994|ref|ZP_05774999.1| amino acid ABC transporter, permease protein [Vibrio parahaemolyticus K5030] gi|260876519|ref|ZP_05888874.1| amino acid ABC transporter, permease protein [Vibrio parahaemolyticus AN-5034] gi|260897424|ref|ZP_05905920.1| amino acid ABC transporter, permease protein [Vibrio parahaemolyticus Peru-466] gi|260901309|ref|ZP_05909704.1| amino acid ABC transporter, permease protein [Vibrio parahaemolyticus AQ4037] gi|28808092|dbj|BAC61329.1| putative amino acid ABC transporter, permease protein [Vibrio parahaemolyticus RIMD 2210633] gi|149746596|gb|EDM57584.1| ABC-type glutamine transport system, permease component [Vibrio parahaemolyticus AQ3810] gi|308087918|gb|EFO37613.1| amino acid ABC transporter, permease protein [Vibrio parahaemolyticus Peru-466] gi|308090376|gb|EFO40071.1| amino acid ABC transporter, permease protein [Vibrio parahaemolyticus AN-5034] gi|308109853|gb|EFO47393.1| amino acid ABC transporter, permease protein [Vibrio parahaemolyticus AQ4037] gi|308114174|gb|EFO51714.1| amino acid ABC transporter, permease protein [Vibrio parahaemolyticus K5030] Length = 246 Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 58/183 (31%), Positives = 99/183 (54%), Gaps = 33/183 (18%) Query: 192 FSFVLGIVLSLFATRLSR--------HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243 F+ LG++++L A LSR + + +++P+L + ++ +G+PTL+ ++L + Sbjct: 58 FAMTLGLLIALPA--LSRSPTLKWMNRIYVEVIRSIPVLVLLLWVYYGMPTLLDVSLNH- 114 Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 F + IAL+ +AF+AE+ R G+ A+ RGQ EAA +L Sbjct: 115 ----------------------FWAGVIALTIAESAFMAEVFRGGIQAINRGQHEAAESL 152 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363 GL + + RLV+LPQA R I+PPL +Q++ +LK SSL +G +DL ++ Sbjct: 153 GLNYWQKMRLVILPQAFRQILPPLGNQFVYVLKMSSLVSVIGLSDLTRRANELVVNEYLP 212 Query: 364 IEI 366 +EI Sbjct: 213 LEI 215 Score = 42.0 bits (97), Expect = 0.18, Method: Compositional matrix adjust. Identities = 22/70 (31%), Positives = 42/70 (60%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 ++ GF +T ++ M A +G L+ LS + + W+ R+YVEV R+IP LV++ ++ Sbjct: 41 LVAGFNDTIQVSLLSMCFAMTLGLLIALPALSRSPTLKWMNRIYVEVIRSIPVLVLLLWV 100 Query: 149 YKSVLSVLPI 158 Y + ++L + Sbjct: 101 YYGMPTLLDV 110 >gi|309785599|ref|ZP_07680230.1| general L-amino acid transport system permease aapQ domain protein [Shigella dysenteriae 1617] gi|308926719|gb|EFP72195.1| general L-amino acid transport system permease aapQ domain protein [Shigella dysenteriae 1617] Length = 155 Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 46/130 (35%), Positives = 73/130 (56%) Query: 30 QIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAI 89 QI+ + + I W +N N+ ++ G FL AGF I Q ++ Y +Y Sbjct: 25 QILAVVAVVGIVGWLFHNTVTNLNNRGITSGFAFLDRGAGFGIVQHLIDYQQGDTYGRVF 84 Query: 90 LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 +VG +NT ++ ++ A+++G +G RLS N L+ + +Y+E+FRNIPPL+ IFF Y Sbjct: 85 IVGLLNTLLVSALCIVFASVLGFFIGLARLSDNWLLRKLSTIYIEIFRNIPPLLQIFFWY 144 Query: 150 KSVLSVLPIP 159 +VL LP P Sbjct: 145 FAVLRNLPGP 154 >gi|300811394|ref|ZP_07091890.1| ABC transporter, permease protein [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|313123231|ref|YP_004033490.1| glutamine ABC transporter, permease protein [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|300497629|gb|EFK32655.1| ABC transporter, permease protein [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|312279794|gb|ADQ60513.1| Glutamine ABC transporter, permease protein [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|325684595|gb|EGD26754.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus delbrueckii subsp. lactis DSM 20072] Length = 222 Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 69/214 (32%), Positives = 117/214 (54%), Gaps = 17/214 (7%) Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240 +T++ + + SFV+G+ L L R +R KT + ++ + +I LP L++I Sbjct: 22 VTIEVSVISIILSFVIGLALGLI--RFTR-IDAKTTRISKVVGVIIDIIRNLPLLLIIFF 78 Query: 241 KYQLHFDKPVLG-QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299 Y F PV+G + + + S IA+ + +A IAE+VRSG++AV GQME Sbjct: 79 SY---FGLPVMGIRVDAVQASV---------IAMVVFESAMIAEVVRSGIMAVDPGQMEG 126 Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359 A + G+T+ +A V+LPQA+ +IP L SQ+++L+K++SLA + +L+ I NQ Sbjct: 127 ARSNGMTYMQAMTHVVLPQALTKMIPALLSQFVSLIKDTSLATIIVLPELLYHAEIIYNQ 186 Query: 360 -TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 T I + L +Y + ++ F N L+ +I Sbjct: 187 NTNYMIPMYLAVAVMYFIICFALSSFANYLSKRI 220 >gi|323261662|gb|EGA45237.1| glutamate/aspartate transport system permease protein GltK [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] Length = 219 Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 43/127 (33%), Positives = 79/127 (62%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 +S +A S + AA+ +EI+R+G+ ++ RGQ AA+ALG+TH ++ +L++LPQA R+++ Sbjct: 91 RLISAMVAFSMFEAAYYSEIIRAGIQSISRGQSSAALALGMTHWQSMKLIILPQAFRAMV 150 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 P L +Q + L +++SL + AD TI + G +E+IL +Y +S+ +L Sbjct: 151 PLLLTQGIVLFQDTSLVYVLSLADFFRTASTIGERDGTQVEMILFAGAVYFVISLSASLL 210 Query: 385 MNRLNAK 391 ++ L + Sbjct: 211 VSYLKKR 217 Score = 43.5 bits (101), Expect = 0.058, Method: Compositional matrix adjust. Identities = 32/110 (29%), Positives = 54/110 (49%), Gaps = 19/110 (17%) Query: 71 EIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICR 130 E D +PY +L G V T + + ++ + GT++ RLS+ +AW + Sbjct: 2 EFDYPSLPY---------LLAGLVITLKITVTAVVVGIVWGTILAVMRLSSFAPIAWFAK 52 Query: 131 VYVEVFRNIPPLVVIFFLY-------KSVLSVLPIPD---HSIVLPFGMF 170 YV VFR+IP ++V+ + Y ++VL + P D S ++ F MF Sbjct: 53 AYVNVFRSIPLVMVLLWFYLIVPGFLQNVLGLSPKTDIRLISAMVAFSMF 102 >gi|323527325|ref|YP_004229478.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia sp. CCGE1001] gi|323384327|gb|ADX56418.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. CCGE1001] Length = 225 Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 44/126 (34%), Positives = 77/126 (61%) Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327 S +A S + AA+ +EI+R+G+ AVPRGQ+ AA ALG+ + +A RL++LPQA R+++P L Sbjct: 99 SAMVAFSLFEAAYYSEIIRAGIQAVPRGQVNAAFALGMGYGQAMRLIILPQAFRAMVPLL 158 Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387 +Q + L +++SL + AD I ++ G +E++L Y + ++ + + Sbjct: 159 LTQGIVLFQDTSLVYVISLADFFRTATNIGDRDGTNVEMVLFAGACYFVICVIASSLVKG 218 Query: 388 LNAKIA 393 L K+A Sbjct: 219 LQKKVA 224 >gi|300767694|ref|ZP_07077604.1| glutamine ABC superfamily ATP binding cassette transporter, permease protein [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|300494679|gb|EFK29837.1| glutamine ABC superfamily ATP binding cassette transporter, permease protein [Lactobacillus plantarum subsp. plantarum ATCC 14917] Length = 213 Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 73/221 (33%), Positives = 120/221 (54%), Gaps = 23/221 (10%) Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233 +GL + T+ ++ VFS ++G + ++F SR T + + +YI F +P Sbjct: 14 QGLGY---TLLSSVIALVFSTIIGTMFAIFEVLPSR-----TMRIIGRVYIEIFR--NIP 63 Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293 LV IA+ + + V F G+ I L+ YT++FIAE VR+G+ +V Sbjct: 64 LLV-IAMFFYVIIPMYVAKIDGFTAGT----------IGLTIYTSSFIAETVRAGIQSVD 112 Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS-LAVAVGFADLVSV 352 GQME A A G+T+ +A ++LPQA + IIPPL +Q++NL+KNSS LA GF DL+ Sbjct: 113 PGQMEGARANGMTYWQAMSKIVLPQAFKIIIPPLGNQFINLVKNSSVLAFVAGF-DLMYQ 171 Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393 +I + + I ++ YL +++ ++ +M L K+A Sbjct: 172 ANSIASLSLDTINSYVVVGVFYLIITLPLSYYMRHLEKKLA 212 Score = 40.0 bits (92), Expect = 0.59, Method: Compositional matrix adjust. Identities = 22/67 (32%), Positives = 38/67 (56%) Query: 83 SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142 + Y + ++ G T + ++ +TIIGT+ + ++ + I RVY+E+FRNIP L Sbjct: 6 THYWSELIQGLGYTLLSSVIALVFSTIIGTMFAIFEVLPSRTMRIIGRVYIEIFRNIPLL 65 Query: 143 VVIFFLY 149 V+ F Y Sbjct: 66 VIAMFFY 72 >gi|156934835|ref|YP_001438751.1| hypothetical protein ESA_02683 [Cronobacter sakazakii ATCC BAA-894] gi|156533089|gb|ABU77915.1| hypothetical protein ESA_02683 [Cronobacter sakazakii ATCC BAA-894] Length = 224 Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 45/134 (33%), Positives = 83/134 (61%), Gaps = 4/134 (2%) Query: 262 VSPE----FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317 +SP+ +S +A S + AA+ +EI+R+G+ ++ RGQ AA+ALG+TH ++ +L++LP Sbjct: 89 ISPKTDIRLISAMVAFSMFEAAYYSEIIRAGIQSISRGQSSAALALGMTHWQSMKLIILP 148 Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377 QA R+++P L +Q + L +++SL + AD TI + G +E+IL +Y + Sbjct: 149 QAFRAMVPLLLTQGIVLFQDTSLVYVLSLADFFRTASTIGERDGTQVEMILFAGAVYFVI 208 Query: 378 SIMIALFMNRLNAK 391 S+ +L ++ L + Sbjct: 209 SLSASLLVSWLKKR 222 Score = 45.4 bits (106), Expect = 0.015, Method: Compositional matrix adjust. Identities = 32/92 (34%), Positives = 48/92 (52%), Gaps = 10/92 (10%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G V T + + +I + GTL+ RLSA K +AW YV VFR+IP ++V+ + Sbjct: 16 LLAGLVITLKITVTAVIFGIVWGTLLAVMRLSAFKPLAWFATAYVNVFRSIPLVMVLLWF 75 Query: 149 Y-------KSVLSVLPIPD---HSIVLPFGMF 170 Y + VL + P D S ++ F MF Sbjct: 76 YLIVPGLLQDVLGISPKTDIRLISAMVAFSMF 107 >gi|70732197|ref|YP_261953.1| ABC transporter permease [Pseudomonas fluorescens Pf-5] gi|68346496|gb|AAY94102.1| probable permease of ABC transporter PA1341 [Pseudomonas fluorescens Pf-5] Length = 248 Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 48/129 (37%), Positives = 78/129 (60%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 ++S+ + L +TAA + E VR+G+ A+PRGQ AA A+G + + VLLPQA R IIP Sbjct: 111 YLSVVVCLGLFTAARVCEQVRTGIQALPRGQESAARAMGFSLPQIYWNVLLPQAYRIIIP 170 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PLTS++LN+ KNSS+A +G +L++ + E + IY +L++ + L M Sbjct: 171 PLTSEFLNVFKNSSVASLIGLMELLAQTKQTAEFSANLFEAFTLATLIYFTLNMSLMLLM 230 Query: 386 NRLNAKIAL 394 + K+++ Sbjct: 231 RLVEKKVSV 239 Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust. Identities = 28/76 (36%), Positives = 42/76 (55%) Query: 82 DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141 +Y + G T +A I A ++G+++G R N+LV+ I VYVE+FRN+P Sbjct: 18 SETYLDWFISGLGWTIAIAVVAWIIALLLGSILGVMRTVPNRLVSGIATVYVEIFRNVPL 77 Query: 142 LVVIFFLYKSVLSVLP 157 LV +F Y V +LP Sbjct: 78 LVQLFIWYFLVPDLLP 93 >gi|240145928|ref|ZP_04744529.1| putative amino acid ABC transporter, permease/amino acid-binding protein [Roseburia intestinalis L1-82] gi|257201957|gb|EEV00242.1| putative amino acid ABC transporter, permease/amino acid-binding protein [Roseburia intestinalis L1-82] Length = 513 Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 62/211 (29%), Positives = 115/211 (54%), Gaps = 24/211 (11%) Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTG-----KALPLLYISTFLIFGLPTLVLIALKYQ 243 I V + ++G+V F + R H++ G AL LY++ ++ G P ++ + + Y Sbjct: 315 ITVLALLVGVVFG-FLIAIVRTNHDRNGGLTILNALCKLYLT--IVRGTPVMIQLLIIYY 371 Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 + F G+ + IA +AA++AEIVRSG++AV GQ EA +L Sbjct: 372 VIFQSIDTGKI------------VVAVIAFGLNSAAYVAEIVRSGIMAVDIGQFEAGRSL 419 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363 GL +++ ++LPQA+++I+P L +++++LLK +S++ +G DL G I + T +A Sbjct: 420 GLNYKQTMMSIILPQAVKNILPALCNEFISLLKETSISGYIGLMDLTKGGDIIRSVTYEA 479 Query: 364 ----IEIILIWMFIYLSLSIMIALFMNRLNA 390 I + LI++ + + LS ++ L +L + Sbjct: 480 FMPLIAVALIYLIMVMGLSKVVNLLERKLRS 510 >gi|167564082|ref|ZP_02356998.1| glutamate/aspartate ABC transporter, permease protein GltK [Burkholderia oklahomensis EO147] gi|167571224|ref|ZP_02364098.1| glutamate/aspartate ABC transporter, permease protein GltK [Burkholderia oklahomensis C6786] Length = 225 Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 42/108 (38%), Positives = 70/108 (64%) Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320 T+ S +A S + AA+ +EI+R+G+ AVPRGQ+ A+ ALG+ + +A RLV+LPQA Sbjct: 92 TIDIRLASAMVAFSLFEAAYYSEIIRAGIQAVPRGQVNASFALGMNYAQAMRLVILPQAF 151 Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368 R+++P L +Q + L +++SL + AD I ++ G ++E+IL Sbjct: 152 RAMVPLLLTQAIVLFQDTSLVYVISLADFFRTAANIGDRDGTSVEMIL 199 >gi|16330176|ref|NP_440904.1| glutamine ABC transporter [Synechocystis sp. PCC 6803] gi|1652664|dbj|BAA17584.1| glutamine-binding periplasmic protein/glutamine transport system permease protein [Synechocystis sp. PCC 6803] Length = 530 Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 52/150 (34%), Positives = 87/150 (58%), Gaps = 5/150 (3%) Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290 G P LV + + ++F P L F IG F + IALS AA++AEI+R G+ Sbjct: 359 GTPMLVQL---FIIYFGLPAL--FKEIGLGITIDRFPAAIIALSLNVAAYLAEIIRGGIQ 413 Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 ++ +GQ EA +LG++ + + V+ PQA R I+PPL ++++ L+K++SL +GF +L Sbjct: 414 SIDQGQWEACESLGMSPWQTMKEVIFPQAFRRILPPLGNEFITLIKDTSLTAVIGFQELF 473 Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIM 380 G I+ T +A E+ + +YL L+ + Sbjct: 474 REGQLIVATTYRAFEVYIAVALVYLLLTTI 503 >gi|271499665|ref|YP_003332690.1| polar amino acid ABC transporter inner membrane subunit [Dickeya dadantii Ech586] gi|270343220|gb|ACZ75985.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya dadantii Ech586] Length = 281 Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 52/126 (41%), Positives = 77/126 (61%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F S IALS A++AE +RSG+++VPRGQ EAA+ALGL+ T V+ PQA+R IIP Sbjct: 142 FTSGIIALSLNYGAYLAETIRSGVLSVPRGQKEAAMALGLSRWVITTHVVAPQALRIIIP 201 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 P SQ+++++K+SSL +G +L + + T +E++ IY LSI + L Sbjct: 202 PAGSQFISMIKDSSLVSLMGLWELNFLAQSYGRSTYHYMEMLTTAAVIYWLLSIGLELLQ 261 Query: 386 NRLNAK 391 RL + Sbjct: 262 GRLERR 267 >gi|332041716|gb|EGI78068.1| polar amino acid abc transporter, inner membrane subunit [Hylemonella gracilis ATCC 19624] Length = 255 Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 52/136 (38%), Positives = 81/136 (59%), Gaps = 7/136 (5%) Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322 +P+ + + + L +T++ IAE VR+G+ A+PRGQ A +ALG + + R VLLP A R Sbjct: 113 TPKLLLVVMGLGFFTSSRIAEQVRTGIQALPRGQRYAGMALGFSTWQTYRYVLLPMAFRI 172 Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382 I+PPLTS+ +N+ KNSS+A AV +L +T + IE+ L +Y ++ A Sbjct: 173 IVPPLTSESMNIFKNSSVAFAVSITELTFFAQQAGEETSRGIEVYLAVTLLY----VISA 228 Query: 383 LFMNRLNAKIALKEKK 398 +NR+ A I EK+ Sbjct: 229 FAINRIMAAI---EKR 241 >gi|326333414|ref|ZP_08199660.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Nocardioidaceae bacterium Broad-1] gi|325948810|gb|EGD40904.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Nocardioidaceae bacterium Broad-1] Length = 267 Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 64/182 (35%), Positives = 101/182 (55%), Gaps = 22/182 (12%) Query: 220 PLLYISTFLI---FGLPTLVL---IALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273 P +IST +I GLP LV+ + L Y L F K + G IG T +AL Sbjct: 93 PYRWISTGIIELFRGLPALVVFLVLGLGYSLAFGKQLPG--GNIGTVT---------LAL 141 Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333 A++AE +R+G+ AVP+GQ EAA LG+TH +A ++LPQA R I+PPLT++ + Sbjct: 142 GLVGGAYMAETIRAGIQAVPKGQYEAARTLGMTHTRAMVTIVLPQAFRVILPPLTNELIL 201 Query: 334 LLKNSSLAVAVGFA----DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 L K+SSL +G + +L + G +N ++ I + YL +++ +++ + R+ Sbjct: 202 LTKDSSLVYILGLSLDEYELTAFGREAMNANANLTPMVTIAL-CYLLITVPLSIVVRRME 260 Query: 390 AK 391 AK Sbjct: 261 AK 262 >gi|297190019|ref|ZP_06907417.1| ABC transporter permease [Streptomyces pristinaespiralis ATCC 25486] gi|297150335|gb|EDY62587.2| ABC transporter permease [Streptomyces pristinaespiralis ATCC 25486] Length = 276 Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 70/209 (33%), Positives = 112/209 (53%), Gaps = 25/209 (11%) Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL---VLIALKYQLHF 246 FVF VLG++++L RLS + L +YI F GLP L + + + L F Sbjct: 81 FVFGLVLGLIIALM--RLS---SVAPYRWLAGVYIEIFR--GLPALLIFIFVGVAVPLAF 133 Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306 I G T + + + L AA++AE +R+G+ AVP+GQMEAA +LG + Sbjct: 134 PG------TEIPGGT----YGKVALGLGLVAAAYMAETIRAGIQAVPKGQMEAARSLGFS 183 Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA----DLVSVGGTIINQTGQ 362 H +A V++PQA R +IPPLT++ + L K+SSL + +G +L G + +QT Sbjct: 184 HARAMVSVIIPQAFRIVIPPLTNELVLLFKDSSLVLFLGVTLEERELTKFGRDLASQTAN 243 Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAK 391 + IL+ YL +++ ++ + RL A+ Sbjct: 244 STP-ILVAGLCYLLVTVPLSFVVRRLEAR 271 Score = 36.6 bits (83), Expect = 7.7, Method: Compositional matrix adjust. Identities = 19/63 (30%), Positives = 33/63 (52%) Query: 95 NTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLS 154 NT SG + ++G ++ RLS+ W+ VY+E+FR +P L++ F+ +V Sbjct: 72 NTVVYTVSGFVFGLVLGLIIALMRLSSVAPYRWLAGVYIEIFRGLPALLIFIFVGVAVPL 131 Query: 155 VLP 157 P Sbjct: 132 AFP 134 >gi|254555900|ref|YP_003062317.1| glutamine ABC transporter, permease protein [Lactobacillus plantarum JDM1] gi|254044827|gb|ACT61620.1| glutamine ABC transporter, permease protein [Lactobacillus plantarum JDM1] Length = 213 Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 70/204 (34%), Positives = 112/204 (54%), Gaps = 20/204 (9%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 VFS ++G + ++F SR T + + +YI F +P LV IA+ + + V Sbjct: 28 VFSTIIGTMFAIFEVLPSR-----TMRIIGRVYIEIFR--NIPLLV-IAMFFYVIIPMYV 79 Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 F G+ I L+ YT++FIAE VR+G+ +V GQME A A G+T+ +A Sbjct: 80 TKIDGFTAGT----------IGLTIYTSSFIAETVRAGIQSVDPGQMEGARANGMTYWQA 129 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSS-LAVAVGFADLVSVGGTIINQTGQAIEIILI 369 ++LPQA + IIPPL +Q++NL+KNSS LA GF DL+ +I + + I ++ Sbjct: 130 MSKIVLPQAFKIIIPPLGNQFINLVKNSSVLAFVAGF-DLMYQANSIASLSLDTINSYVV 188 Query: 370 WMFIYLSLSIMIALFMNRLNAKIA 393 YL +++ ++ +M L K+A Sbjct: 189 VGVFYLIITLPLSYYMRHLEKKLA 212 Score = 40.0 bits (92), Expect = 0.64, Method: Compositional matrix adjust. Identities = 22/67 (32%), Positives = 38/67 (56%) Query: 83 SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142 + Y + ++ G T + ++ +TIIGT+ + ++ + I RVY+E+FRNIP L Sbjct: 6 THYWSELIQGLGYTLLSSVIALVFSTIIGTMFAIFEVLPSRTMRIIGRVYIEIFRNIPLL 65 Query: 143 VVIFFLY 149 V+ F Y Sbjct: 66 VIAMFFY 72 >gi|320008607|gb|ADW03457.1| polar amino acid ABC transporter, inner membrane subunit [Streptomyces flavogriseus ATCC 33331] Length = 322 Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 67/195 (34%), Positives = 104/195 (53%), Gaps = 10/195 (5%) Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG-QFNFIGGST-VS 263 RLSR+ + LYI + G P V + L + L PVL F + T V Sbjct: 106 RLSRN---PVTSWVAWLYI--WFFRGTPVYVQLLLWFNLALIFPVLNIPFVYKDEMTDVM 160 Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 FM + L+ AA++AEIVR+G+ +V GQ EA+ ALG+T K R V+LPQA+R I Sbjct: 161 TPFMCALLGLALNEAAYMAEIVRAGIQSVDEGQTEASHALGMTQAKTMRRVVLPQALRVI 220 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL---IWMFIYLSLSIM 380 IPP ++++N+LK SSL AV + +L+ I + + +E++ IW + S+ + Sbjct: 221 IPPTGNEFINMLKTSSLVYAVTYNELLRSTSQIGSTSYAVMEMLFVASIWYIVMTSVFSV 280 Query: 381 IALFMNRLNAKIALK 395 ++ R A+ L+ Sbjct: 281 GQYYLERRYARGTLR 295 >gi|289804697|ref|ZP_06535326.1| glutamate/aspartate ABC transporter, permease protein GltK [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 190 Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 43/127 (33%), Positives = 79/127 (62%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 +S +A S + AA+ +EI+R+G+ ++ RGQ AA+ALG+TH ++ +L++LPQA R+++ Sbjct: 64 RLISAMVAFSMFEAAYYSEIIRAGIQSISRGQSSAALALGMTHWQSMKLIILPQAFRAMV 123 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 P L +Q + L +++SL + AD TI + G +E+IL +Y +S+ +L Sbjct: 124 PLLLTQGIVLFQDTSLVYVLSLADFFRTASTIGERDGTQVEMILFAGAVYFVISLSASLL 183 Query: 385 MNRLNAK 391 ++ L + Sbjct: 184 VSYLKKR 190 Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust. Identities = 24/70 (34%), Positives = 39/70 (55%), Gaps = 10/70 (14%) Query: 111 GTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY-------KSVLSVLPIPD--- 160 GT++ RLS+ +AW + YV VFR+IP ++V+ + Y ++VL + P D Sbjct: 6 GTILAVMRLSSFAPIAWFAKAYVNVFRSIPLVMVLLWFYLIVPGFLQNVLGLSPKTDIRL 65 Query: 161 HSIVLPFGMF 170 S ++ F MF Sbjct: 66 ISAMVAFSMF 75 >gi|168231678|ref|ZP_02656736.1| glutamate/aspartate ABC transporter, permease protein GltK [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|194470531|ref|ZP_03076515.1| glutamate/aspartate ABC transporter, permease protein GltK [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|197247679|ref|YP_002145639.1| glutamate/aspartate ABC transporter permease GltK [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|204930484|ref|ZP_03221414.1| glutamate/aspartate ABC transporter, permease protein GltK [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|194456895|gb|EDX45734.1| glutamate/aspartate ABC transporter, permease protein GltK [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|197211382|gb|ACH48779.1| glutamate/aspartate ABC transporter, permease protein GltK [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|204320418|gb|EDZ05621.1| glutamate/aspartate ABC transporter, permease protein GltK [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205333960|gb|EDZ20724.1| glutamate/aspartate ABC transporter, permease protein GltK [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] Length = 224 Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 43/127 (33%), Positives = 79/127 (62%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 +S +A S + AA+ +EI+R+G+ ++ RGQ AA+ALG+TH ++ +L++LPQA R+++ Sbjct: 96 RLISAMVAFSMFEAAYYSEIIRAGIQSISRGQSSAALALGMTHWQSMKLIILPQAFRAMV 155 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 P L +Q + L +++SL + AD TI + G +E+IL +Y +S+ +L Sbjct: 156 PLLLTQGIVLFQDTSLVYVLSLADFFRTASTIGERDGTQVEMILFAGAVYFVISLSASLL 215 Query: 385 MNRLNAK 391 ++ L + Sbjct: 216 VSYLKKR 222 Score = 42.7 bits (99), Expect = 0.11, Method: Compositional matrix adjust. Identities = 28/92 (30%), Positives = 49/92 (53%), Gaps = 10/92 (10%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G V T + + ++ + GT++ RLS+ +AW + YV VFR+IP ++V+ + Sbjct: 16 LLAGLVITLKITVTAVVVGIVWGTILAVMRLSSFTPIAWFAKAYVNVFRSIPLVMVLLWF 75 Query: 149 Y-------KSVLSVLPIPD---HSIVLPFGMF 170 Y ++VL + P D S ++ F MF Sbjct: 76 YLIVPGFLQNVLGLSPKTDIRLISAMVAFSMF 107 >gi|237798756|ref|ZP_04587217.1| amino acid ABC transporter permease [Pseudomonas syringae pv. oryzae str. 1_6] gi|331021609|gb|EGI01666.1| amino acid ABC transporter permease [Pseudomonas syringae pv. oryzae str. 1_6] Length = 248 Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 49/129 (37%), Positives = 77/129 (59%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+S+ + L +TAA + E VR+G+ A+P+GQ AA A+G + VLLPQA R IIP Sbjct: 111 FLSVVVCLGLFTAARVCEQVRTGIEALPKGQESAARAMGFKLPQIYWNVLLPQAYRIIIP 170 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PLTS++LN+ KNSS+A +G +L++ + E + IY +L++ + L M Sbjct: 171 PLTSEFLNVFKNSSVASLIGLMELLAQTKQTAEFSANLFEAFTLATLIYFTLNMGLMLLM 230 Query: 386 NRLNAKIAL 394 + K+A+ Sbjct: 231 RVIEKKVAV 239 Score = 44.7 bits (104), Expect = 0.028, Method: Compositional matrix adjust. Identities = 28/77 (36%), Positives = 42/77 (54%) Query: 81 SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140 +Y + G T +A I A I+G+++G R ++LV+ I VYVE+FRN+P Sbjct: 17 GSETYLDWFISGLGWTVAIAVVAWIIALILGSVLGVMRTVPSRLVSGIATVYVEIFRNVP 76 Query: 141 PLVVIFFLYKSVLSVLP 157 LV +F Y V +LP Sbjct: 77 LLVQLFIWYFLVPDLLP 93 >gi|320535581|ref|ZP_08035678.1| ABC transporter, permease protein [Treponema phagedenis F0421] gi|320147544|gb|EFW39063.1| ABC transporter, permease protein [Treponema phagedenis F0421] Length = 270 Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 72/222 (32%), Positives = 115/222 (51%), Gaps = 24/222 (10%) Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249 ++ S G++L L +R H + K L +YI L+ GLP LV+ L Y P Sbjct: 59 YILSIFFGLLLGL-----ARASHIRWLKELVTVYIE--LVRGLPMLVI--LYYIAFVAVP 109 Query: 250 VLGQ-FNFIGGSTVSPEFMSLY------------IALSCYTAAFIAEIVRSGLIAVPRGQ 296 + N + ++ E M + IAL +AFIAEI R+G+ +V +GQ Sbjct: 110 AISSVLNAVFAPLINAEIMEGFSPRSFSFALLAIIALVLGYSAFIAEIFRAGIESVDKGQ 169 Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356 +EAA ALGLT + ++LPQA R+I+P L ++++ ++K+SSL +G D+ +G Sbjct: 170 VEAASALGLTKTQTMIHIILPQATRNILPALANEFIAVIKDSSLVSVLGVQDITQIGKVY 229 Query: 357 INQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 + T E + F YL L+I +++ + RL K LK+ K Sbjct: 230 SSATFLFFETYNVVAFFYLCLTISLSIAVRRLERK--LKKGK 269 >gi|318060272|ref|ZP_07978995.1| arginine/ornithine transport permease [Streptomyces sp. SA3_actG] Length = 347 Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 45/117 (38%), Positives = 73/117 (62%), Gaps = 3/117 (2%) Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 AA++AEI R+GL+AV GQ EAA ALG++H K R +++PQAMR I+PP ++ +N+LK Sbjct: 202 AAYMAEICRAGLLAVDEGQTEAAHALGMSHAKTLRRIVIPQAMRVIVPPTGNEVINMLKT 261 Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILI---WMFIYLSLSIMIALFMNRLNAK 391 +SL AV + +L+ I +G +E++ + W I S+ + ++ R A+ Sbjct: 262 TSLVAAVQYPELLRAAQDIGQVSGAPVEMLFLAAAWYLILTSVLSIGQFYIERYYAR 318 >gi|238893279|ref|YP_002918013.1| glutamate/aspartate transport system inner membrane component [Klebsiella pneumoniae NTUH-K2044] gi|238545595|dbj|BAH61946.1| glutamate/aspartate transport system inner membrane component [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] Length = 250 Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 49/136 (36%), Positives = 75/136 (55%) Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321 ++PEF+ L +T+AF+ E + SGL AV GQ EAA++ G T + R +LLPQ + Sbjct: 110 LTPEFLCSMWGLGVFTSAFLVEEIASGLRAVSHGQREAALSQGFTPWQELRFILLPQGLA 169 Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 + P+ QYLNL+K SSLA +GFA+L I + A+E + +YL+L + Sbjct: 170 NAWQPIVGQYLNLMKLSSLASGIGFAELTYQVRQIESYNAHALEAFAVGTALYLALGAAM 229 Query: 382 ALFMNRLNAKIALKEK 397 + + RL L+ Sbjct: 230 GVALTRLGPGRKLQRS 245 >gi|167564805|ref|ZP_02357721.1| ABC polar amino acid family transporter, inner membrane subunit [Burkholderia oklahomensis EO147] gi|167571973|ref|ZP_02364847.1| ABC polar amino acid family transporter, inner membrane subunit [Burkholderia oklahomensis C6786] Length = 222 Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 45/129 (34%), Positives = 83/129 (64%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P F+ + L Y+AA+++EIVR + +V RGQMEAA ++G++ +A R ++LPQA+ + Sbjct: 87 PAFVCGMLGLGFYSAAYVSEIVRGAIQSVDRGQMEAARSIGMSSGQAMRAIILPQAVVRM 146 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 IPPL ++++ L+KNS+L + DL+ G II+ + +++E+ L +YL L+ Sbjct: 147 IPPLGNEFIALIKNSALVSLLTINDLMHEGQKIISVSYRSLEVYLAIALVYLVLTQATNY 206 Query: 384 FMNRLNAKI 392 ++R+ ++ Sbjct: 207 ALHRVERRL 215 >gi|291539690|emb|CBL12801.1| amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Roseburia intestinalis XB6B4] Length = 513 Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 62/211 (29%), Positives = 115/211 (54%), Gaps = 24/211 (11%) Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTG-----KALPLLYISTFLIFGLPTLVLIALKYQ 243 I V + ++G+V F + R H++ G AL LY++ ++ G P ++ + + Y Sbjct: 315 ITVLALLVGVVFG-FLIAIVRTNHDRNGGLTILNALCKLYLT--IVRGTPVMIQLLIIYY 371 Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 + F G+ + IA +AA++AEIVRSG++AV GQ EA +L Sbjct: 372 VIFQSIDTGKI------------VVAVIAFGLNSAAYVAEIVRSGIMAVDIGQFEAGRSL 419 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363 GL +++ ++LPQA+++I+P L +++++LLK +S++ +G DL G I + T +A Sbjct: 420 GLNYKQTMMSIILPQAVKNILPALCNEFISLLKETSISGYIGLMDLTKGGDIIRSVTYEA 479 Query: 364 ----IEIILIWMFIYLSLSIMIALFMNRLNA 390 I + LI++ + + LS ++ L +L + Sbjct: 480 FMPLIAVALIYLIMVMGLSKVVNLLERKLRS 510 >gi|308067589|ref|YP_003869194.1| Glutamine transport system permease protein glnP [Paenibacillus polymyxa E681] gi|305856868|gb|ADM68656.1| Glutamine transport system permease protein glnP [Paenibacillus polymyxa E681] Length = 482 Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 59/200 (29%), Positives = 104/200 (52%), Gaps = 17/200 (8%) Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252 +F+LG+V H K + + +++ F G+P LI L + ++F P Sbjct: 297 AFILGLVFGFMKVS-----HNKVFRGIATVFVDIFR--GIP---LIVLAFFIYFGIPQAL 346 Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312 F P F++ + LS A++ EI+R G+ ++ GQMEAA +LGL +R A Sbjct: 347 DFKM-------PLFVAAVLTLSLNAGAYVTEIIRGGIQSIDPGQMEAARSLGLPYRTAML 399 Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372 ++LPQA++ +IP +Q + LK++S+ +G +L G II +T Q+ +I L+ Sbjct: 400 KIILPQAVKIMIPSFINQLVITLKDTSILSVIGLVELTQSGKIIIARTFQSFDIWLVVAV 459 Query: 373 IYLSLSIMIALFMNRLNAKI 392 +YL + ++ NRL ++ Sbjct: 460 MYLIVITVLTKISNRLEGRV 479 Score = 42.0 bits (97), Expect = 0.15, Method: Compositional matrix adjust. Identities = 46/173 (26%), Positives = 77/173 (44%), Gaps = 24/173 (13%) Query: 71 EIDQGIVPYTSD-----SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLV 125 E +G+ P + S+ +++ G NT ++ A I+G + G ++S NK+ Sbjct: 256 ESGKGVAPVETSRWGLISASLPSLIKGMGNTLLYTLVSLLVAFILGLVFGFMKVSHNKVF 315 Query: 126 AWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDT 185 I V+V++FR IP +V+ FF+Y IP L F M L LT+ Sbjct: 316 RGIATVFVDIFRGIPLIVLAFFIY------FGIPQ---ALDFKMPL----FVAAVLTLSL 362 Query: 186 NAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLI 238 NA +V + G + S+ ++ + ++L L Y + L LP V I Sbjct: 363 NAGAYVTEIIRGGIQSIDPGQM------EAARSLGLPYRTAMLKIILPQAVKI 409 >gi|304414486|ref|ZP_07395706.1| putative polar amino acid ABC transporter permease [Candidatus Regiella insecticola LSR1] gi|304283204|gb|EFL91606.1| putative polar amino acid ABC transporter permease [Candidatus Regiella insecticola LSR1] Length = 245 Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 49/110 (44%), Positives = 71/110 (64%), Gaps = 2/110 (1%) Query: 253 QFNFIGGSTVSP--EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 Q F+G + P EF+S L Y+AAFIAE +R+G+ V GQ AA ALGLT+ ++ Sbjct: 99 QAVFLGITLSWPSFEFLSGLTGLILYSAAFIAEELRAGINGVASGQKYAAHALGLTNWQS 158 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 R V+LPQA++ +PPL QY+N++KNSSL +A+G A+L + +T Sbjct: 159 MRYVILPQALKISMPPLLGQYMNIIKNSSLTMAIGVAELSYASRQVETET 208 Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust. Identities = 24/67 (35%), Positives = 39/67 (58%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151 GF+ T WL+ + AT++G L+ R S + + W +Y +FRN P L+ +FF Y + Sbjct: 22 GFLLTLWLSSCTSVIATLLGFLLATARDSHLRALQWPVMLYSALFRNTPLLIQLFFWYFA 81 Query: 152 VLSVLPI 158 V +LP+ Sbjct: 82 VSKILPV 88 >gi|149204303|ref|ZP_01881270.1| glutamate/aspartate ABC transporter, permease protein [Roseovarius sp. TM1035] gi|149142188|gb|EDM30235.1| glutamate/aspartate ABC transporter, permease protein [Roseovarius sp. TM1035] Length = 200 Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 50/125 (40%), Positives = 77/125 (61%), Gaps = 4/125 (3%) Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322 PEF++ +AL YTA+ +AE VR+G+ AVP G AA A G+ + R VLLP + R Sbjct: 61 QPEFVTAVVALGLYTASRVAEQVRAGIEAVPSGLKSAATAQGMGVAQVYRYVLLPISFRL 120 Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE----IILIWMFIYLSLS 378 I+PP+TS++L + KNSSLA+ +G +L + I T Q+ E +I++FI L + Sbjct: 121 IVPPMTSEFLTVFKNSSLALTIGLLELTAQSQQIAEYTFQSFEAYTAATVIYVFIALCAT 180 Query: 379 IMIAL 383 I++ + Sbjct: 181 IVMTV 185 Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 24/48 (50%), Positives = 34/48 (70%) Query: 110 IGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLP 157 +G+LVG GR NK+V+ +C YVE+FRN+P LV +F Y +V +LP Sbjct: 1 MGSLVGVGRTLPNKVVSTLCTTYVELFRNVPLLVQMFIWYFAVPEMLP 48 >gi|66046174|ref|YP_236015.1| amino acid ABC transporter permease [Pseudomonas syringae pv. syringae B728a] gi|63256881|gb|AAY37977.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Pseudomonas syringae pv. syringae B728a] Length = 219 Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 56/144 (38%), Positives = 83/144 (57%), Gaps = 13/144 (9%) Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291 +P LV + Y F P+ F+G S P F + LS + A+ + E+VR GL + Sbjct: 66 IPVLVWL---YLFFFGLPI-----FLGVSI--PAFWCAVLVLSLWGASEVGEVVRGGLRS 115 Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 +PRGQ EA +A+GL + VLLPQA++ + PP+ + Y L+K SSLAV +G D+ Sbjct: 116 IPRGQREAGLAIGLGLGQLYGRVLLPQALKRLTPPVINVYTRLIKTSSLAVLIGVVDVTK 175 Query: 352 VGGTIINQTGQAIEIILIWMFIYL 375 VG II +T E +LI+ F++L Sbjct: 176 VGQQIIERT---YESVLIYGFLFL 196 >gi|152981390|ref|YP_001351970.1| glutamate/aspartate ABC type transport system permease protein [Janthinobacterium sp. Marseille] gi|151281467|gb|ABR89877.1| glutamate/aspartate ABC type transport system permease protein [Janthinobacterium sp. Marseille] Length = 243 Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 69/215 (32%), Positives = 108/215 (50%), Gaps = 26/215 (12%) Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPTLVLIALKYQ 243 ++F+FV+G ++ + T R G + +PLL F +P LV + Sbjct: 36 WIFAFVVGSIVGVGRTSEKRWLVRLGGAYVELFRNIPLLVQFFVWYFVVPGLVPAVKAWV 95 Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 + D +F++ + L +T++ IAE VRSG+ A+PRGQ A AL Sbjct: 96 ITLDP-------------TEHQFVTAVVCLGFFTSSRIAEQVRSGIQALPRGQRNAGYAL 142 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363 GLT + R VLLP A R IIPPLTS+ +NL+KN+++A ++G +L + T + Sbjct: 143 GLTTAQTYRYVLLPMAYRIIIPPLTSELMNLIKNTAVAYSIGLVELFFRTREMGEMTFRY 202 Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 E IY ++IA+ NRL +AL E++ Sbjct: 203 FEAFGAATLIY----VVIAMTANRL---MALVERR 230 Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust. Identities = 32/90 (35%), Positives = 48/90 (53%), Gaps = 5/90 (5%) Query: 72 IDQGI----VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAW 127 +D GI VP D ++ ++L G T +A I A ++G++VG GR S + + Sbjct: 1 MDLGIFLEQVP-DGDGTWLESLLSGLGWTLAVALFAWIFAFVVGSIVGVGRTSEKRWLVR 59 Query: 128 ICRVYVEVFRNIPPLVVIFFLYKSVLSVLP 157 + YVE+FRNIP LV F Y V ++P Sbjct: 60 LGGAYVELFRNIPLLVQFFVWYFVVPGLVP 89 >gi|306832994|ref|ZP_07466126.1| glutamine ABC superfamily ATP binding cassette transporter, permease protein [Streptococcus bovis ATCC 700338] gi|304424893|gb|EFM28027.1| glutamine ABC superfamily ATP binding cassette transporter, permease protein [Streptococcus bovis ATCC 700338] Length = 228 Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 54/178 (30%), Positives = 105/178 (58%), Gaps = 12/178 (6%) Query: 223 YISTFLIF---GLPTLVLIALKYQ-LHFDKPVLGQFNFIGGSTVSPEFMSLY---IALSC 275 +I++F ++ G P +V I + + +HF+ + +G + +F L I +S Sbjct: 51 WIASFYVWVFRGTPMVVQIMIAFAWMHFNNAPI-----VGFGVLDLDFSRLLPGIIIISL 105 Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335 + A+I+EIVR+G+ AVP+GQ+EAA +LG+ A R V+LPQA+++I+P L ++++ ++ Sbjct: 106 NSGAYISEIVRAGIEAVPKGQLEAAYSLGIRPVNAMRYVILPQALKNILPALGNEFITII 165 Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393 K+SSL +G +L + +++ T I +L F YL ++ +++ + RL ++ Sbjct: 166 KDSSLLQTIGVMELWNGAQSVVTATYLPITPLLFAAFYYLMVTTVMSFLVKRLEKRMG 223 >gi|289672926|ref|ZP_06493816.1| glutamine/glutamate ABC transporter, permease protein [Pseudomonas syringae pv. syringae FF5] Length = 226 Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 56/144 (38%), Positives = 83/144 (57%), Gaps = 13/144 (9%) Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291 +P LV + Y F P+ F+G S P F + LS + A+ + E+VR GL + Sbjct: 73 IPVLVWL---YLFFFGLPI-----FLGLSI--PAFWCAVLVLSLWGASEVGEVVRGGLRS 122 Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 +PRGQ EA +A+GL + VLLPQA++ + PP+ + Y L+K SSLAV +G D+ Sbjct: 123 IPRGQREAGLAIGLGLGQLYGRVLLPQALKRLTPPVINVYTRLIKTSSLAVLIGVVDVTK 182 Query: 352 VGGTIINQTGQAIEIILIWMFIYL 375 VG II +T E +LI+ F++L Sbjct: 183 VGQQIIERT---YESVLIYGFLFL 203 >gi|15677362|ref|NP_274517.1| amino acid ABC transporter, permease protein [Neisseria meningitidis MC58] gi|121635180|ref|YP_975425.1| putative binding-protein-dependent transport systems inner membrane protein [Neisseria meningitidis FAM18] gi|218768491|ref|YP_002343003.1| putative binding-protein-dependent transport systems inner membrane protein [Neisseria meningitidis Z2491] gi|254805275|ref|YP_003083496.1| putative amino acid ABC transporter [Neisseria meningitidis alpha14] gi|7226752|gb|AAF41865.1| amino acid ABC transporter, permease protein [Neisseria meningitidis MC58] gi|120866886|emb|CAM10645.1| putative binding-protein-dependent transport systems inner membrane protein [Neisseria meningitidis FAM18] gi|121052499|emb|CAM08838.1| putative binding-protein-dependent transport systems inner membrane protein [Neisseria meningitidis Z2491] gi|254668817|emb|CBA06816.1| putative amino acid ABC transporter [Neisseria meningitidis alpha14] gi|254670681|emb|CBA06791.1| polar amino acid transport system permease protein [Neisseria meningitidis alpha153] gi|254673241|emb|CBA08243.1| polar amino acid transport system permease protein [Neisseria meningitidis alpha275] gi|261392244|emb|CAX49764.1| putative amino acid ABC transporter permease protein [Neisseria meningitidis 8013] gi|308389654|gb|ADO31974.1| amino acid ABC transporter, permease protein [Neisseria meningitidis alpha710] gi|316986034|gb|EFV64971.1| amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Neisseria meningitidis H44/76] gi|319410739|emb|CBY91122.1| putative amino acid ABC transporter permease protein [Neisseria meningitidis WUE 2594] gi|325128575|gb|EGC51447.1| polar amino amino acid ABC transporter [Neisseria meningitidis N1568] gi|325130591|gb|EGC53338.1| polar amino amino acid ABC transporter [Neisseria meningitidis OX99.30304] gi|325132674|gb|EGC55359.1| polar amino amino acid ABC transporter [Neisseria meningitidis M6190] gi|325134674|gb|EGC57314.1| polar amino amino acid ABC transporter [Neisseria meningitidis M13399] gi|325136597|gb|EGC59198.1| polar amino amino acid ABC transporter [Neisseria meningitidis M0579] gi|325138562|gb|EGC61125.1| polar amino amino acid ABC transporter [Neisseria meningitidis ES14902] gi|325140663|gb|EGC63180.1| polar amino amino acid ABC transporter [Neisseria meningitidis CU385] gi|325142710|gb|EGC65090.1| polar amino amino acid ABC transporter [Neisseria meningitidis 961-5945] gi|325144801|gb|EGC67092.1| polar amino amino acid ABC transporter [Neisseria meningitidis M01-240013] gi|325198631|gb|ADY94087.1| polar amino amino acid ABC transporter, PAAT family, permease protein [Neisseria meningitidis G2136] gi|325199888|gb|ADY95343.1| polar amino amino acid ABC transporter, PAAT family, permease protein [Neisseria meningitidis H44/76] gi|325201799|gb|ADY97253.1| polar amino amino acid ABC transporter, PAAT family, permease protein [Neisseria meningitidis M01-240149] gi|325204486|gb|ADY99939.1| polar amino amino acid ABC transporter, PAAT family, permease protein [Neisseria meningitidis M01-240355] gi|325205744|gb|ADZ01197.1| polar amino amino acid ABC transporter, PAAT family, permease protein [Neisseria meningitidis M04-240196] gi|325208448|gb|ADZ03900.1| polar amino amino acid ABC transporter, PAAT family, permease protein [Neisseria meningitidis NZ-05/33] Length = 248 Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 47/121 (38%), Positives = 74/121 (61%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +AL + A+I EI R+G+ ++ +GQMEAA +LGLT+ +A R V+LPQA+R ++PPL S+ Sbjct: 122 LALIANSGAYICEIFRAGIQSIDKGQMEAARSLGLTYPQAMRYVILPQALRRMLPPLASE 181 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++ LLK+SSL + A+L V TI + E + IYL ++ + RL Sbjct: 182 FITLLKDSSLLSVIAVAELAYVQNTITGRYSVYEEPLYTVALIYLLMTTFLGWIFLRLEK 241 Query: 391 K 391 + Sbjct: 242 R 242 >gi|288904828|ref|YP_003430050.1| amino acid ABC transporter, permease protein [Streptococcus gallolyticus UCN34] gi|306830860|ref|ZP_07464022.1| glutamine ABC superfamily ATP binding cassette transporter, permease protein [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|325977757|ref|YP_004287473.1| amino acid ABC transporter permease [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] gi|288731554|emb|CBI13109.1| Putative amino acid ABC transporter, permease protein [Streptococcus gallolyticus UCN34] gi|304426883|gb|EFM29993.1| glutamine ABC superfamily ATP binding cassette transporter, permease protein [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|325177685|emb|CBZ47729.1| amino acid ABC transporter, permease protein [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] Length = 228 Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 54/178 (30%), Positives = 105/178 (58%), Gaps = 12/178 (6%) Query: 223 YISTFLIF---GLPTLVLIALKYQ-LHFDKPVLGQFNFIGGSTVSPEFMSLY---IALSC 275 +I++F ++ G P +V I + + +HF+ + +G + +F L I +S Sbjct: 51 WIASFYVWVFRGTPMVVQIMIAFAWMHFNNAPI-----VGFGVLDLDFSRLLPGIIIISL 105 Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335 + A+I+EIVR+G+ AVP+GQ+EAA +LG+ A R V+LPQA+++I+P L ++++ ++ Sbjct: 106 NSGAYISEIVRAGIEAVPKGQLEAAYSLGIRPVNAMRYVILPQALKNILPALGNEFITII 165 Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393 K+SSL +G +L + +++ T I +L F YL ++ +++ + RL ++ Sbjct: 166 KDSSLLQTIGVMELWNGAQSVVTATYLPITPLLFAAFYYLMVTTVMSFLVKRLEKRMG 223 >gi|304387087|ref|ZP_07369338.1| amino acid ABC superfamily ATP binding cassette transporter, permease protein [Neisseria meningitidis ATCC 13091] gi|304338836|gb|EFM04939.1| amino acid ABC superfamily ATP binding cassette transporter, permease protein [Neisseria meningitidis ATCC 13091] Length = 248 Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 47/121 (38%), Positives = 74/121 (61%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +AL + A+I EI R+G+ ++ +GQMEAA +LGLT+ +A R V+LPQA+R ++PPL S+ Sbjct: 122 LALIANSGAYICEIFRAGIQSIDKGQMEAARSLGLTYPQAMRYVILPQALRRMLPPLASE 181 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++ LLK+SSL + A+L V TI + E + IYL ++ + RL Sbjct: 182 FITLLKDSSLLSVIAVAELAYVQNTITGRYSVYEEPLYTVALIYLLMTTFLGWIFLRLEK 241 Query: 391 K 391 + Sbjct: 242 R 242 >gi|293605113|ref|ZP_06687505.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Achromobacter piechaudii ATCC 43553] gi|292816516|gb|EFF75605.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Achromobacter piechaudii ATCC 43553] Length = 222 Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 45/129 (34%), Positives = 80/129 (62%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P F + L Y+ A+++EIVR + +V RGQ EAA +LG++ +A R+++LPQA+ + Sbjct: 87 PAFACGVLGLGMYSGAYVSEIVRGAIQSVDRGQTEAARSLGMSSGQAMRIIILPQAVVRM 146 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 IPPL ++++ L+KNS+L + DL+ G II+ + +++E L+ IYL L+ L Sbjct: 147 IPPLGNEFIALIKNSALVSLLTIHDLMHEGQKIISVSYRSLETYLVVALIYLVLTTAAML 206 Query: 384 FMNRLNAKI 392 + ++ + Sbjct: 207 ILRKVEQHL 215 Score = 36.6 bits (83), Expect = 6.5, Method: Compositional matrix adjust. Identities = 34/151 (22%), Positives = 67/151 (44%), Gaps = 17/151 (11%) Query: 88 AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAW-ICRVYVEVFRNIPPLVVIF 146 +++ G V T + ++ ++G LVG GRL+ + V + +C VY+ FR P LV +F Sbjct: 14 SLMRGAVVTIEVTAGALLLGCVMGLLVGVGRLNPKRYVIYNLCSVYLLFFRGTPLLVQLF 73 Query: 147 FLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL--FA 204 + +P + LP + L + + +V V G + S+ Sbjct: 74 IWF------FGLPQFGVTLP--------AFACGVLGLGMYSGAYVSEIVRGAIQSVDRGQ 119 Query: 205 TRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235 T +R +G+A+ ++ + ++ +P L Sbjct: 120 TEAARSLGMSSGQAMRIIILPQAVVRMIPPL 150 >gi|28377715|ref|NP_784607.1| glutamine ABC transporter, permease protein [Lactobacillus plantarum WCFS1] gi|308179877|ref|YP_003924005.1| glutamine ABC transporter, permease protein [Lactobacillus plantarum subsp. plantarum ST-III] gi|28270548|emb|CAD63452.1| glutamine ABC transporter, permease protein [Lactobacillus plantarum WCFS1] gi|308045368|gb|ADN97911.1| glutamine ABC transporter, permease protein [Lactobacillus plantarum subsp. plantarum ST-III] Length = 213 Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 73/221 (33%), Positives = 120/221 (54%), Gaps = 23/221 (10%) Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233 +GL + T+ ++ VFS ++G + ++F SR T + + +YI F +P Sbjct: 14 QGLGY---TLLSSVIALVFSTIIGTMFAIFEVLPSR-----TMRIIGRVYIEIFR--NIP 63 Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293 LV IA+ + + V F G+ I L+ YT++FIAE VR+G+ +V Sbjct: 64 LLV-IAMFFYVIIPMYVAKIDGFTAGT----------IGLTIYTSSFIAETVRAGIQSVD 112 Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS-LAVAVGFADLVSV 352 GQME A A G+T+ +A ++LPQA + IIPPL +Q++NL+KNSS LA GF DL+ Sbjct: 113 PGQMEGARANGMTYWQAMSKIVLPQAFKIIIPPLGNQFINLVKNSSVLAFVAGF-DLMYQ 171 Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393 +I + + I ++ YL +++ ++ +M L K+A Sbjct: 172 ANSIASLSLDTINSYVVVGVFYLIITLPLSYYMRHLEKKLA 212 Score = 40.0 bits (92), Expect = 0.65, Method: Compositional matrix adjust. Identities = 22/67 (32%), Positives = 38/67 (56%) Query: 83 SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142 + Y + ++ G T + ++ +TIIGT+ + ++ + I RVY+E+FRNIP L Sbjct: 6 THYWSELIQGLGYTLLSSVIALVFSTIIGTMFAIFEVLPSRTMRIIGRVYIEIFRNIPLL 65 Query: 143 VVIFFLY 149 V+ F Y Sbjct: 66 VIAMFFY 72 >gi|224582498|ref|YP_002636296.1| glutamate/aspartate transport system permease GltK [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|224467025|gb|ACN44855.1| glutamate/aspartate transport system permease protein GltK [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] Length = 224 Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 43/127 (33%), Positives = 79/127 (62%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 +S +A S + AA+ +EI+R+G+ ++ RGQ AA+ALG+TH ++ +L++LPQA R+++ Sbjct: 96 RLISAMVAFSMFEAAYYSEIIRAGIQSISRGQSSAALALGMTHWQSMKLIILPQAFRAMV 155 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 P L +Q + L +++SL + AD TI + G +E+IL +Y +S+ +L Sbjct: 156 PLLLTQGIVLFQDTSLVYVLSLADFFRTASTIGERDGTQVEMILFAGAVYFVISLSASLL 215 Query: 385 MNRLNAK 391 ++ L + Sbjct: 216 VSYLKKR 222 Score = 41.2 bits (95), Expect = 0.27, Method: Compositional matrix adjust. Identities = 28/92 (30%), Positives = 49/92 (53%), Gaps = 10/92 (10%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G V T + + ++ + GT++ RLS+ +AW + YV VFR+IP ++V+ + Sbjct: 16 LLAGLVITLKITVTAVVVGIVWGTILAVMRLSSFAPIAWFAKAYVNVFRSIPLVMVLQWF 75 Query: 149 Y-------KSVLSVLPIPD---HSIVLPFGMF 170 Y ++VL + P D S ++ F MF Sbjct: 76 YLIVPGFLQNVLGLSPKTDIRLISAMVAFSMF 107 >gi|254475048|ref|ZP_05088434.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Ruegeria sp. R11] gi|214029291|gb|EEB70126.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Ruegeria sp. R11] Length = 273 Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 60/193 (31%), Positives = 102/193 (52%), Gaps = 8/193 (4%) Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGL-PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP 264 R S F+ + + +P++ + ++ F L P LV + F + NF P Sbjct: 86 RQSARFYIEVVRGIPIIVLLLYVAFVLAPALVELRNWIGAQFGLDPIRTRNF-------P 138 Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 IAL +AFI+E+ R+GL +V GQ+EAA ALGL + R ++ PQA+R+I+ Sbjct: 139 LLWRAIIALMIAYSAFISEVFRAGLQSVDEGQIEAAKALGLNRWQRFRFIVFPQAIRTIL 198 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 PPL + ++ L+K+SSL +G AD+ +G + E + IYL+L+I ++L Sbjct: 199 PPLGNDFVALVKDSSLVSVLGVADVTQLGKITAVGNFRYFETYNVVALIYLTLTIGLSLA 258 Query: 385 MNRLNAKIALKEK 397 + RL + +++ Sbjct: 259 LRRLEKHLRSRQE 271 >gi|16759615|ref|NP_455232.1| glutamate/aspartate transport system permease GltK [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|29142612|ref|NP_805954.1| glutamate/aspartate transport system permease GltK [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|62179261|ref|YP_215678.1| glutamate/aspartate ABC transporter [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|161615119|ref|YP_001589084.1| hypothetical protein SPAB_02887 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|168236650|ref|ZP_02661708.1| glutamate/aspartate ABC transporter, permease protein GltK [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|168264404|ref|ZP_02686377.1| glutamate/aspartate ABC transporter, permease protein GltK [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|194738377|ref|YP_002113774.1| glutamate/aspartate ABC transporter permease GltK [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|207856128|ref|YP_002242779.1| glutamate/aspartate transport system permease GltK [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|213052444|ref|ZP_03345322.1| glutamate/aspartate transport system permease protein GltK [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213425080|ref|ZP_03357830.1| glutamate/aspartate transport system permease protein GltK [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213609635|ref|ZP_03369461.1| glutamate/aspartate transport system permease protein GltK [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] gi|213852459|ref|ZP_03381991.1| glutamate/aspartate transport system permease protein GltK [Salmonella enterica subsp. enterica serovar Typhi str. M223] gi|238911614|ref|ZP_04655451.1| glutamate/aspartate transport system permease protein GltK [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|289823919|ref|ZP_06543519.1| glutamate/aspartate transport system permease protein GltK [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|25296623|pir||AD0583 glutamate/aspartate transport system permease protein GltK STY0708 [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16501907|emb|CAD05134.1| glutamate/aspartate transport system permease protein GltK [Salmonella enterica subsp. enterica serovar Typhi] gi|29138243|gb|AAO69814.1| glutamate/aspartate transport system permease protein GltK [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|62126894|gb|AAX64597.1| ABC superfamily (membrane), glutamate/aspartate transporter [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|161364483|gb|ABX68251.1| hypothetical protein SPAB_02887 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194713879|gb|ACF93100.1| glutamate/aspartate ABC transporter, permease protein GltK [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197290346|gb|EDY29702.1| glutamate/aspartate ABC transporter, permease protein GltK [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|205347092|gb|EDZ33723.1| glutamate/aspartate ABC transporter, permease protein GltK [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|206707931|emb|CAR32220.1| glutamate/aspartate transport system permease protein GltK [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|322613211|gb|EFY10154.1| glutamate/aspartate transport system permease protein GltK [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322621279|gb|EFY18136.1| glutamate/aspartate transport system permease protein GltK [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322623699|gb|EFY20537.1| glutamate/aspartate transport system permease protein GltK [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322628971|gb|EFY25750.1| glutamate/aspartate transport system permease protein GltK [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322631693|gb|EFY28447.1| glutamate/aspartate transport system permease protein GltK [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322637571|gb|EFY34273.1| glutamate/aspartate transport system permease protein GltK [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322641911|gb|EFY38541.1| glutamate/aspartate transport system permease protein GltK [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322646755|gb|EFY43261.1| glutamate/aspartate transport system permease protein GltK [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322651456|gb|EFY47836.1| glutamate/aspartate transport system permease protein GltK [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322653093|gb|EFY49427.1| glutamate/aspartate transport system permease protein GltK [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322658813|gb|EFY55068.1| glutamate/aspartate transport system permease protein GltK [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322664917|gb|EFY61110.1| glutamate/aspartate transport system permease protein GltK [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322668919|gb|EFY65071.1| glutamate/aspartate transport system permease protein GltK [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322670575|gb|EFY66708.1| glutamate/aspartate transport system permease protein GltK [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322675316|gb|EFY71392.1| glutamate/aspartate transport system permease protein GltK [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322682213|gb|EFY78238.1| glutamate/aspartate transport system permease protein GltK [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322684958|gb|EFY80955.1| glutamate/aspartate transport system permease protein GltK [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|322713727|gb|EFZ05298.1| glutamate/aspartate transport system permease protein GltK [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] gi|323193984|gb|EFZ79186.1| glutamate/aspartate transport system permease protein GltK [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323197924|gb|EFZ83046.1| glutamate/aspartate transport system permease protein GltK [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323202029|gb|EFZ87089.1| glutamate/aspartate transport system permease protein GltK [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323207162|gb|EFZ92115.1| glutamate/aspartate transport system permease protein GltK [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323210931|gb|EFZ95794.1| glutamate/aspartate transport system permease protein GltK [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323214311|gb|EFZ99062.1| glutamate/aspartate transport system permease protein GltK [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323219284|gb|EGA03775.1| glutamate/aspartate transport system permease protein GltK [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323225505|gb|EGA09735.1| glutamate/aspartate transport system permease protein GltK [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323231064|gb|EGA15180.1| glutamate/aspartate transport system permease protein GltK [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323234104|gb|EGA18193.1| glutamate/aspartate transport system permease protein GltK [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323238201|gb|EGA22259.1| glutamate/aspartate transport system permease protein GltK [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323242565|gb|EGA26589.1| glutamate/aspartate transport system permease protein GltK [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323248458|gb|EGA32392.1| glutamate/aspartate transport system permease GltK [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323251327|gb|EGA35199.1| glutamate/aspartate transport system permease GltK [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323259255|gb|EGA42898.1| glutamate/aspartate transport system permease GltK [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323264844|gb|EGA48345.1| glutamate/aspartate transport system permease GltK [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323272319|gb|EGA55726.1| glutamate/aspartate transport system permease GltK [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] Length = 224 Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 43/127 (33%), Positives = 79/127 (62%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 +S +A S + AA+ +EI+R+G+ ++ RGQ AA+ALG+TH ++ +L++LPQA R+++ Sbjct: 96 RLISAMVAFSMFEAAYYSEIIRAGIQSISRGQSSAALALGMTHWQSMKLIILPQAFRAMV 155 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 P L +Q + L +++SL + AD TI + G +E+IL +Y +S+ +L Sbjct: 156 PLLLTQGIVLFQDTSLVYVLSLADFFRTASTIGERDGTQVEMILFAGAVYFVISLSASLL 215 Query: 385 MNRLNAK 391 ++ L + Sbjct: 216 VSYLKKR 222 Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust. Identities = 28/92 (30%), Positives = 49/92 (53%), Gaps = 10/92 (10%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G V T + + ++ + GT++ RLS+ +AW + YV VFR+IP ++V+ + Sbjct: 16 LLAGLVITLKITVTAVVVGIVWGTILAVMRLSSFAPIAWFAKAYVNVFRSIPLVMVLLWF 75 Query: 149 Y-------KSVLSVLPIPD---HSIVLPFGMF 170 Y ++VL + P D S ++ F MF Sbjct: 76 YLIVPGFLQNVLGLSPKTDIRLISAMVAFSMF 107 >gi|307708519|ref|ZP_07644984.1| amino acid ABC transporter, permease protein [Streptococcus mitis NCTC 12261] gi|307615435|gb|EFN94643.1| amino acid ABC transporter, permease protein [Streptococcus mitis NCTC 12261] Length = 227 Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 59/211 (27%), Positives = 118/211 (55%), Gaps = 17/211 (8%) Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF---GLPTLVLIALKYQL-HFD 247 F +LG+VL+ F +++ K PL++++ ++ G P +V I + + L H + Sbjct: 30 FGTILGVVLA---------FGQRS-KFKPLVWLANLYVWIFRGTPMMVQIMIAFALMHIN 79 Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307 P + Q +G + + +S + A+++E VR+G+ AVP+GQ+EAA +LG+ Sbjct: 80 APTI-QVGILGVDL--SRLIPGILIISMNSGAYVSETVRAGINAVPKGQLEAAYSLGIRP 136 Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367 + A R V+LPQA+++I+P L ++++ ++K+SSL A+G +L + T+ T + + Sbjct: 137 KNAMRYVILPQAIKNILPALGNEFITIIKDSSLLSAIGVMELWNGATTVSTTTYLPLTPL 196 Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 L F YL ++ ++ + + ++ +KK Sbjct: 197 LFAAFYYLIMTSILTVALKAFEKRMGQGDKK 227 >gi|77407242|ref|ZP_00784203.1| amino acid ABC transporter, permease protein [Streptococcus agalactiae H36B] gi|77174148|gb|EAO77056.1| amino acid ABC transporter, permease protein [Streptococcus agalactiae H36B] Length = 214 Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 43/114 (37%), Positives = 72/114 (63%), Gaps = 8/114 (7%) Query: 247 DKPVLGQFNFI--------GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQME 298 + P+L Q F+ G + F + + + Y A+I+E++RSG+ AVP+GQ E Sbjct: 73 NTPLLVQMVFVYYGLAIISNGHVMISAFFTAVLCVGLYHGAYISEVIRSGIEAVPKGQTE 132 Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352 AA+A G T + +L++LPQA+R+I+PP+T+Q +NL+KN+S + AD++ V Sbjct: 133 AALAQGFTANQTMQLIILPQAVRTILPPMTNQVVNLIKNTSTVAIISGADIMFV 186 >gi|283834047|ref|ZP_06353788.1| glutamate/aspartate ABC transporter, permease protein [Citrobacter youngae ATCC 29220] gi|291070190|gb|EFE08299.1| glutamate/aspartate ABC transporter, permease protein [Citrobacter youngae ATCC 29220] Length = 224 Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 43/127 (33%), Positives = 78/127 (61%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 +S +A S + AA+ +EI+R+G+ ++ RGQ AA+ALG+TH ++ +L++LPQA R+++ Sbjct: 96 RLISAMVAFSMFEAAYYSEIIRAGIQSISRGQSSAALALGMTHWQSMKLIILPQAFRAMV 155 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 P L +Q + L +++SL + AD TI + G +E+IL +Y S+ +L Sbjct: 156 PLLLTQGIVLFQDTSLVYVLSLADFFRTASTIGERDGTQVEMILFAGAVYFVFSLSASLL 215 Query: 385 MNRLNAK 391 ++ L + Sbjct: 216 VSYLKKR 222 Score = 39.7 bits (91), Expect = 0.92, Method: Compositional matrix adjust. Identities = 27/92 (29%), Positives = 49/92 (53%), Gaps = 10/92 (10%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G + T + + ++ + GT++ RLS+ +AW + YV VFR+IP ++V+ + Sbjct: 16 LLDGLIITLKITVTAVVIGIVWGTILAVMRLSSFAPIAWFAKGYVNVFRSIPLVMVLLWF 75 Query: 149 Y-------KSVLSVLPIPD---HSIVLPFGMF 170 Y ++VL + P D S ++ F MF Sbjct: 76 YLIVPGFLQNVLGLSPKTDIRLISAMVAFSMF 107 >gi|254424601|ref|ZP_05038319.1| ABC transporter, permease protein, putative [Synechococcus sp. PCC 7335] gi|196192090|gb|EDX87054.1| ABC transporter, permease protein, putative [Synechococcus sp. PCC 7335] Length = 225 Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 60/180 (33%), Positives = 100/180 (55%), Gaps = 24/180 (13%) Query: 217 KALPLLYISTFLI-FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSC 275 + PLL + F+I FG+P LV + L F FN G + + LS Sbjct: 63 RGTPLL-VQLFMIYFGVPALVR---TFGLDFT------FNQWGAAV---------LGLSL 103 Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335 +AA++AEIVR+G+ ++ GQ EAA +LGL + + V+ PQA+R ++PPL ++++ LL Sbjct: 104 NSAAYLAEIVRAGIQSIEVGQKEAAESLGLDSSQTMQYVVFPQALRRMVPPLGNEFITLL 163 Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM----IALFMNRLNAK 391 K++SL +G+ +L G I+ + ++ EI IYL+L+++ +L RL+ K Sbjct: 164 KDTSLVAVIGYQELFRQGQLIVARNFRSFEIFFAVALIYLALNVIASQAFSLLERRLDPK 223 >gi|238786810|ref|ZP_04630611.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Yersinia frederiksenii ATCC 33641] gi|238725178|gb|EEQ16817.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Yersinia frederiksenii ATCC 33641] Length = 255 Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 42/133 (31%), Positives = 79/133 (59%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+S +A++ A+++EI R+G+ ++ RGQMEA+ +LG+++ K R V+LPQA R ++P Sbjct: 122 FLSCIVAITLNAGAYVSEIFRAGIQSIDRGQMEASRSLGMSYGKTMRKVILPQAFRRMLP 181 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PL + + ++K+SSLA A+G ADL T+ E L +Y ++ +++L + Sbjct: 182 PLGNNAIAIVKDSSLASAIGLADLAYAARTVSGAYATYWEPYLAISLVYWVITFLLSLLV 241 Query: 386 NRLNAKIALKEKK 398 + + + + Sbjct: 242 RHMEKRFGKSDSR 254 >gi|310778139|ref|YP_003966472.1| amino acid ABC transporter membrane protein, PAAT family [Ilyobacter polytropus DSM 2926] gi|309747462|gb|ADO82124.1| amino acid ABC transporter membrane protein, PAAT family [Ilyobacter polytropus DSM 2926] Length = 236 Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 64/209 (30%), Positives = 116/209 (55%), Gaps = 21/209 (10%) Query: 196 LGIVLSLFATRLSRHFH-----EKTGKALPLLYISTF---LIFGLPTLVLIALKYQLHFD 247 +G++L++ RLS HF+ EK K PL I+ + +I G P +V QL Sbjct: 41 VGVLLAVM--RLS-HFYPFKNTEKYKKTNPLNLIALWYIDIIRGTPAVV------QLM-- 89 Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307 VL F+G +P F+ +A ++A++AEI+R+G+ + +GQ EA+ ALG+ + Sbjct: 90 --VLANVVFVGNLRNTPIFVVAALAFGLNSSAYVAEIIRAGIEGLDKGQTEASRALGMNY 147 Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367 + +++PQA+++I+P L S+++ LLK +S+ +G DL+ I +QT + IE + Sbjct: 148 FLTMKEIIIPQAIKNILPALVSEFITLLKETSIVGFIGGVDLLRSANIITSQTYRGIEPL 207 Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIALKE 396 L IYL ++ + FM ++ + + + Sbjct: 208 LAVGLIYLIMTSIFTKFMRKVEKGLKVSD 236 >gi|300362096|ref|ZP_07058273.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus gasseri JV-V03] gi|300354715|gb|EFJ70586.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus gasseri JV-V03] Length = 544 Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 43/122 (35%), Positives = 78/122 (63%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IA+ + A++AE +RSG+ ++P+GQMEAA +LGL+ +KA R V++PQA+++I P L ++ Sbjct: 416 IAIGLNSGAYVAEDIRSGIDSLPKGQMEAARSLGLSRQKAFRYVIIPQAIKNIWPALGNE 475 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++ LLK+SSL +G A+L+ + T + + + I M IY ++ + +N Sbjct: 476 FITLLKDSSLVSVIGVAELMYQTQLVQTSTYKGVLPLFIAMIIYFVMTFSLTRLLNHFEK 535 Query: 391 KI 392 ++ Sbjct: 536 RM 537 >gi|167628304|ref|YP_001678803.1| glutamine abc transporter, glutamine-binding protein, putative [Heliobacterium modesticaldum Ice1] gi|167591044|gb|ABZ82792.1| glutamine abc transporter, glutamine-binding protein, putative [Heliobacterium modesticaldum Ice1] Length = 217 Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 45/122 (36%), Positives = 79/122 (64%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I L+ YT A+I E+ R+G+ AVP+GQMEAA + G+ + +A V+LPQA++ I+PPLT+Q Sbjct: 92 IGLAMYTGAYIGEVFRAGIQAVPKGQMEAARSSGMNYLQAMGYVVLPQAVKIILPPLTNQ 151 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 +N++KNS++ + ADL+ I ++T E+ + +YL +++ ++ N L Sbjct: 152 VVNMVKNSAILSTIVVADLMYETYRIASETFIIFEVFIFAALLYLVITVPLSTVANLLEQ 211 Query: 391 KI 392 ++ Sbjct: 212 RL 213 >gi|293392788|ref|ZP_06637106.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Serratia odorifera DSM 4582] gi|291424647|gb|EFE97858.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Serratia odorifera DSM 4582] Length = 254 Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 42/133 (31%), Positives = 79/133 (59%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+S +A++ A+++EI R+G+ ++ RGQMEA+ +LG+++ K R V+LPQA R ++P Sbjct: 121 FLSCVVAITLNAGAYVSEIFRAGIQSIDRGQMEASRSLGMSYGKTMRKVILPQAFRRMLP 180 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PL + + ++K+SSLA A+G ADL T+ E L +Y ++ +++L + Sbjct: 181 PLGNNAIAIVKDSSLASAIGLADLAYAARTVSGAYATYWEPYLTISLVYWVITFVLSLMV 240 Query: 386 NRLNAKIALKEKK 398 + + + + Sbjct: 241 QHMEKRFGKSDSR 253 >gi|328886197|emb|CCA59436.1| amino acid ABC transporter, permease protein [Streptomyces venezuelae ATCC 10712] Length = 214 Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 49/122 (40%), Positives = 76/122 (62%), Gaps = 2/122 (1%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +AL CYT+AFI E +RSG+ VPRGQ EAA +LG+T + V+LPQA R++IPP+ S Sbjct: 89 LALGCYTSAFICEALRSGINTVPRGQGEAARSLGMTFSQTLGTVVLPQAFRTVIPPIGST 148 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI-YLSLSIMIALFMNRLN 389 + L KNS++A A +L+ T +++ G I +W+ + YL +++ I+ N L Sbjct: 149 LIALAKNSAIAGAFSVTELLGTYKT-LSELGYNIVWTFVWIAVGYLIITLGISALFNVLE 207 Query: 390 AK 391 + Sbjct: 208 KR 209 >gi|219847285|ref|YP_002461718.1| polar amino acid ABC transporter inner membrane subunit [Chloroflexus aggregans DSM 9485] gi|219541544|gb|ACL23282.1| polar amino acid ABC transporter, inner membrane subunit [Chloroflexus aggregans DSM 9485] Length = 410 Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 48/125 (38%), Positives = 79/125 (63%), Gaps = 3/125 (2%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +A++ ++AA++AE VR GL A+PRGQ+EAA ALGL + T L+ LPQA+R+++P L Q Sbjct: 277 VAVTLFSAAYLAENVRGGLQAIPRGQVEAARALGLNVVQTTLLITLPQALRAVVPVLVGQ 336 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF---MNR 387 ++ L K++SL V +G DL+ I+ Q +W +L ++ + LF M+R Sbjct: 337 FIALFKDTSLVVIIGLVDLLGAAQNIVGQPQWLGTPGGVWRETFLVIAAVYWLFSFTMSR 396 Query: 388 LNAKI 392 ++ +I Sbjct: 397 VSKRI 401 >gi|317506458|ref|ZP_07964259.1| extracellular solute-binding protein, family 3 [Segniliparus rugosus ATCC BAA-974] gi|316255219|gb|EFV14488.1| extracellular solute-binding protein, family 3 [Segniliparus rugosus ATCC BAA-974] Length = 508 Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 49/144 (34%), Positives = 87/144 (60%), Gaps = 7/144 (4%) Query: 260 STVSPEFMS------LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313 S SP F+S + L+ YT+AF+A+ +RSG+ VP GQ+EAA +LG K RL Sbjct: 365 SERSPTFISDNNFWLAVLGLAAYTSAFVADALRSGVNTVPIGQVEAARSLGFGFTKVLRL 424 Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII-NQTGQAIEIILIWMF 372 ++LPQA R++I PL SQ++ L +N+++A A+G A+ + +I N++ + E+ ++ Sbjct: 425 IVLPQAFRAVIRPLGSQFIALARNTTVASAIGVAEAALLMKEMIENESDRLFEVFGVFAL 484 Query: 373 IYLSLSIMIALFMNRLNAKIALKE 396 ++ + S++ N L K+ ++ Sbjct: 485 VFGAFSVLFGFLFNVLGRKLEVRR 508 >gi|294628576|ref|ZP_06707136.1| amino acid ABC transporter, permease [Streptomyces sp. e14] gi|292831909|gb|EFF90258.1| amino acid ABC transporter, permease [Streptomyces sp. e14] Length = 286 Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 71/213 (33%), Positives = 116/213 (54%), Gaps = 19/213 (8%) Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233 RGL LT+ A + F LG +L++F RLS + +A+ Y+ +L +P Sbjct: 73 RGL---WLTLWLTAVVMALGFALGTLLAVF--RLSAN---PVLRAVSWGYV--WLFRSIP 122 Query: 234 TLVLIALKYQLHFDKP-VLG--QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290 LV + L + + P VLG + G TV+ I L+ + AA+ AE+VR G++ Sbjct: 123 ILVQLLLWFNIGALYPRVLGVQTVDLFGPVTVA------IIGLTLHEAAYAAEVVRGGIL 176 Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 +V RGQ+EAA ALGL+ + R ++LPQAMRSI+PP + + LK +S+ + DL+ Sbjct: 177 SVDRGQIEAAQALGLSRWRRWRRIVLPQAMRSIVPPAGNMLIGTLKGTSIVSVIAVQDLL 236 Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 I +QT Q I ++++ Y ++ +++L Sbjct: 237 YSTQLIYHQTYQVIPLLMVATLWYTVVTSVLSL 269 Score = 36.2 bits (82), Expect = 9.6, Method: Compositional matrix adjust. Identities = 31/83 (37%), Positives = 41/83 (49%), Gaps = 11/83 (13%) Query: 79 YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138 +TSDS +L G T WL M +GTL+ RLSAN ++ + YV +FR+ Sbjct: 66 FTSDS-----VLRGLWLTLWLTAVVMALGFALGTLLAVFRLSANPVLRAVSWGYVWLFRS 120 Query: 139 IPPLVVIFF------LYKSVLSV 155 IP LV + LY VL V Sbjct: 121 IPILVQLLLWFNIGALYPRVLGV 143 >gi|199598208|ref|ZP_03211630.1| ABC-type amino acid transport system, permease and periplasmic component [Lactobacillus rhamnosus HN001] gi|258508351|ref|YP_003171102.1| amino acid ABC transporter permease [Lactobacillus rhamnosus GG] gi|199590969|gb|EDY99053.1| ABC-type amino acid transport system, permease and periplasmic component [Lactobacillus rhamnosus HN001] gi|257148278|emb|CAR87251.1| ABC transporter, amino acid transporter permease protein [Lactobacillus rhamnosus GG] gi|259649665|dbj|BAI41827.1| amino acid ABC transporter permease and substrate binding components [Lactobacillus rhamnosus GG] Length = 485 Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 47/130 (36%), Positives = 83/130 (63%), Gaps = 4/130 (3%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P ++ IA+S +AA++AEI+RSG+ ++P GQ EAA +LGL+ R+ V+LPQA+++I Sbjct: 353 PALVAGLIAVSLNSAAYVAEIIRSGIDSIPIGQTEAARSLGLSERQTMTSVVLPQAIKNI 412 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY----LSLSI 379 P L +++++L+K SS+ +G DL+ + T + ++ ILI M +Y LS Sbjct: 413 WPALGNEFISLIKESSIVSIIGVTDLIYQLTVVQTATYKGVQPILIAMVLYFVLTFGLSK 472 Query: 380 MIALFMNRLN 389 +++ F ++N Sbjct: 473 LLSHFERKMN 482 >gi|16764040|ref|NP_459655.1| glutamate/aspartate transporter [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|56414208|ref|YP_151283.1| glutamate/aspartate transport system permease GltK [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|167550799|ref|ZP_02344555.1| glutamate/aspartate ABC transporter, permease protein GltK [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|167990672|ref|ZP_02571772.1| glutamate/aspartate ABC transporter, permease protein GltK [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|168240512|ref|ZP_02665444.1| glutamate/aspartate ABC transporter, permease protein GltK [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|168465840|ref|ZP_02699722.1| glutamate/aspartate ABC transporter, permease protein GltK [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|168820212|ref|ZP_02832212.1| glutamate/aspartate ABC transporter, permease protein GltK [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|194450507|ref|YP_002044698.1| glutamate/aspartate ABC transporter permease GltK [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|197264070|ref|ZP_03164144.1| glutamate/aspartate ABC transporter, permease protein GltK [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197363131|ref|YP_002142768.1| glutamate/aspartate transport system permease GltK [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|198245682|ref|YP_002214651.1| glutamate/aspartate ABC transporter permease GltK [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|200390497|ref|ZP_03217108.1| glutamate/aspartate ABC transporter, permease protein GltK [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|16419176|gb|AAL19614.1| glutamate/aspartate transporter [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|56128465|gb|AAV77971.1| glutamate/aspartate transport system permease protein GltK [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|194408811|gb|ACF69030.1| glutamate/aspartate ABC transporter, permease protein GltK [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|195631617|gb|EDX50137.1| glutamate/aspartate ABC transporter, permease protein GltK [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197094608|emb|CAR60130.1| glutamate/aspartate transport system permease protein GltK [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|197242325|gb|EDY24945.1| glutamate/aspartate ABC transporter, permease protein GltK [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197940198|gb|ACH77531.1| glutamate/aspartate ABC transporter, permease protein GltK [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|199602942|gb|EDZ01488.1| glutamate/aspartate ABC transporter, permease protein GltK [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|205324183|gb|EDZ12022.1| glutamate/aspartate ABC transporter, permease protein GltK [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205330901|gb|EDZ17665.1| glutamate/aspartate ABC transporter, permease protein GltK [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205339786|gb|EDZ26550.1| glutamate/aspartate ABC transporter, permease protein GltK [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205343124|gb|EDZ29888.1| glutamate/aspartate ABC transporter, permease protein GltK [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|261245935|emb|CBG23737.1| glutamate/aspartate transport system permease protein GltK [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267992397|gb|ACY87282.1| glutamate/aspartate transporter [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301157263|emb|CBW16751.1| glutamate/aspartate transport system permease protein GltK [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312911695|dbj|BAJ35669.1| glutamate/aspartate ABC transporter permease protein GltK [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|320084936|emb|CBY94725.1| Inner membrane amino-acid ABC transporter permease protein yecS [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|321226242|gb|EFX51293.1| Glutamate Aspartate transport system permease protein GltK [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|323128980|gb|ADX16410.1| glutamate/aspartate transporter [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|326622406|gb|EGE28751.1| glutamate/aspartate transporter [Salmonella enterica subsp. enterica serovar Dublin str. 3246] Length = 224 Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 43/127 (33%), Positives = 79/127 (62%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 +S +A S + AA+ +EI+R+G+ ++ RGQ AA+ALG+TH ++ +L++LPQA R+++ Sbjct: 96 RLISAMVAFSMFEAAYYSEIIRAGIQSISRGQSSAALALGMTHWQSMKLIILPQAFRAMV 155 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 P L +Q + L +++SL + AD TI + G +E+IL +Y +S+ +L Sbjct: 156 PLLLTQGIVLFQDTSLVYVLSLADFFRTASTIGERDGTQVEMILFAGAVYFVISLSASLL 215 Query: 385 MNRLNAK 391 ++ L + Sbjct: 216 VSYLKKR 222 Score = 43.1 bits (100), Expect = 0.081, Method: Compositional matrix adjust. Identities = 29/92 (31%), Positives = 49/92 (53%), Gaps = 10/92 (10%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G V T + + +I + GT++ RLS+ +AW + YV VFR+IP ++V+ + Sbjct: 16 LLAGLVITLKITVTAVIVGIVWGTILAVMRLSSFAPIAWFAKAYVNVFRSIPLVMVLLWF 75 Query: 149 Y-------KSVLSVLPIPD---HSIVLPFGMF 170 Y ++VL + P D S ++ F MF Sbjct: 76 YLIVPGFLQNVLGLSPKTDIRLISAMVAFSMF 107 >gi|330877360|gb|EGH11509.1| amino acid ABC transporter permease [Pseudomonas syringae pv. morsprunorum str. M302280PT] gi|330966688|gb|EGH66948.1| amino acid ABC transporter permease [Pseudomonas syringae pv. actinidiae str. M302091] Length = 221 Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 60/210 (28%), Positives = 104/210 (49%), Gaps = 23/210 (10%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPTLVLIALKYQL 244 V VLG VL+L ++ G +++PLL + T+ +P L++ Sbjct: 29 VGGLVLGTVLALMRLSSNKLLANVAGAYVNYFRSIPLLLVITWFYLAVP----FVLRWIT 84 Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304 D P+ F S +A + AA+ EIVR+G+ ++ +GQM AA ALG Sbjct: 85 GEDTPI-------------GAFASCVVAFMMFEAAYFCEIVRAGVQSISKGQMGAAQALG 131 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364 + + + RL++LPQA R + P L Q + L +++SL VG D ++ + + G+A Sbjct: 132 MNYSQMMRLIILPQAFRKMTPLLLQQSIILFQDTSLVYTVGLVDFLNASRSSGDIIGRAN 191 Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIAL 394 E ++I +Y ++S +L + RL + A+ Sbjct: 192 EFLIIAGLVYFTISFAASLLVKRLQKRFAV 221 Score = 43.5 bits (101), Expect = 0.061, Method: Compositional matrix adjust. Identities = 27/65 (41%), Positives = 40/65 (61%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151 G V T L G++ ++GT++ RLS+NKL+A + YV FR+IP L+VI + Y + Sbjct: 16 GMVMTLKLMTLGIVGGLVLGTVLALMRLSSNKLLANVAGAYVNYFRSIPLLLVITWFYLA 75 Query: 152 VLSVL 156 V VL Sbjct: 76 VPFVL 80 >gi|294637497|ref|ZP_06715783.1| glutamate/aspartate ABC transporter, permease protein [Edwardsiella tarda ATCC 23685] gi|291089329|gb|EFE21890.1| glutamate/aspartate ABC transporter, permease protein [Edwardsiella tarda ATCC 23685] Length = 225 Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 47/130 (36%), Positives = 80/130 (61%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 +S +A + + AA+ +EI+R+G+ +V RGQ AA+ALG+T ++ LV+LPQA R+++ Sbjct: 96 RLISAMVAFALFEAAYYSEIIRAGIKSVARGQNAAALALGMTSWQSMYLVILPQAFRAMV 155 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 P L +Q + L +++SL + AD TI + G +E+IL FIY +S+ +L Sbjct: 156 PLLLTQGIVLFQDTSLVYVLSLADFFRTASTIGERDGTQLEMILFAGFIYFIISLSASLL 215 Query: 385 MNRLNAKIAL 394 +N L + A+ Sbjct: 216 VNHLKKRSAV 225 Score = 39.3 bits (90), Expect = 1.0, Method: Compositional matrix adjust. Identities = 23/68 (33%), Positives = 39/68 (57%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G V T + + +I + GT + RLS K +AW +YV +FR++P ++V+ + Sbjct: 16 LLDGMVITLQITVTAVIVGILWGTCLAVMRLSRWKPLAWFAALYVNLFRSVPLVMVLLWF 75 Query: 149 YKSVLSVL 156 Y V S+L Sbjct: 76 YLVVPSLL 83 >gi|134093509|ref|YP_001098584.1| glutamate/aspartate ABC transporter permease [Herminiimonas arsenicoxydans] gi|133737412|emb|CAL60455.1| Glutamate/aspartate transport system permease protein gltJ [Herminiimonas arsenicoxydans] Length = 243 Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 60/166 (36%), Positives = 90/166 (54%), Gaps = 19/166 (11%) Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPTLVLIALKYQ 243 ++F+FVLG ++ + T R G + +PLL F +P LV + Sbjct: 36 WIFAFVLGSLIGIARTTEKRWLVGLGGAYVELFRNIPLLVQFFVWYFVIPGLVPAVKTWV 95 Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 + D P + QF ++ I L +T++ IAE VRSG+ ++PRGQ A AL Sbjct: 96 ITLD-PTIHQF------------VTAIICLGFFTSSRIAEQVRSGIQSLPRGQRNAGYAL 142 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349 GLT + R VLLP A R IIPPLTS+ +NL+KN+++A ++G +L Sbjct: 143 GLTGMQTYRFVLLPMAYRIIIPPLTSELMNLIKNTAVAYSIGLVEL 188 Score = 44.3 bits (103), Expect = 0.034, Method: Compositional matrix adjust. Identities = 25/77 (32%), Positives = 41/77 (53%) Query: 81 SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140 D ++ +L G T +AF I A ++G+L+G R + + + + YVE+FRNIP Sbjct: 13 GDGTWGYMLLSGLGWTLAVAFFAWIFAFVLGSLIGIARTTEKRWLVGLGGAYVELFRNIP 72 Query: 141 PLVVIFFLYKSVLSVLP 157 LV F Y + ++P Sbjct: 73 LLVQFFVWYFVIPGLVP 89 >gi|225620483|ref|YP_002721740.1| amino acid transport system permease [Brachyspira hyodysenteriae WA1] gi|225215302|gb|ACN84036.1| amino acid transport system permease protein [Brachyspira hyodysenteriae WA1] Length = 237 Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 66/223 (29%), Positives = 121/223 (54%), Gaps = 22/223 (9%) Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKAL----PLLYISTF-- 227 +GL F ++ T A V +LGI+++L +LS + K K L PL ++ + Sbjct: 23 KGLLF---SVGTTACATVIGIILGILVALL--QLSEFYPFKNSKKLRDFNPLSKLAFWYV 77 Query: 228 -LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286 ++ G P +V QL V+ F+ +P + IA + A++AEI+R Sbjct: 78 NILRGTPVVV------QLMIWANVI----FVDNLRDTPILIIAAIAFGINSGAYVAEIIR 127 Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346 +G+ ++ +GQMEAA ALG+ + + + +++PQA++ I+PPL S+++ LLK +S+ +G Sbjct: 128 AGIQSLDKGQMEAARALGMNYSMSMKEIIIPQAIKKILPPLVSEFIALLKETSVVGFIGG 187 Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 DL+ I +QT + +E ++ IY L+ + A+ M ++ Sbjct: 188 VDLLRSANIITSQTYRGVEPLIAVGIIYFILTSVFAMIMKKVE 230 >gi|28871315|ref|NP_793934.1| amino acid ABC transporter permease [Pseudomonas syringae pv. tomato str. DC3000] gi|213970848|ref|ZP_03398971.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tomato T1] gi|301384516|ref|ZP_07232934.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tomato Max13] gi|302060678|ref|ZP_07252219.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tomato K40] gi|302130491|ref|ZP_07256481.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tomato NCPPB 1108] gi|28854566|gb|AAO57629.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tomato str. DC3000] gi|213924371|gb|EEB57943.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tomato T1] Length = 221 Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 60/210 (28%), Positives = 104/210 (49%), Gaps = 23/210 (10%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPTLVLIALKYQL 244 V VLG VL+L ++ G +++PLL + T+ +P L++ Sbjct: 29 VGGLVLGTVLALMRLSSNKLLANVAGAYVNYFRSIPLLLVITWFYLAVP----FVLRWIT 84 Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304 D P+ F S +A + AA+ EIVR+G+ ++ +GQM AA ALG Sbjct: 85 GEDTPI-------------GAFASCVVAFMMFEAAYFCEIVRAGVQSISKGQMGAAQALG 131 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364 + + + RL++LPQA R + P L Q + L +++SL VG D ++ + + G+A Sbjct: 132 MNYSQMMRLIILPQAFRKMTPLLLQQSIILFQDTSLVYTVGLVDFLNASRSSGDIIGRAN 191 Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIAL 394 E ++I +Y ++S +L + RL + A+ Sbjct: 192 EFLIIAGLVYFTISFAASLLVKRLQKRFAV 221 Score = 43.5 bits (101), Expect = 0.065, Method: Compositional matrix adjust. Identities = 27/65 (41%), Positives = 40/65 (61%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151 G V T L G++ ++GT++ RLS+NKL+A + YV FR+IP L+VI + Y + Sbjct: 16 GMVMTLKLMSLGIVGGLVLGTVLALMRLSSNKLLANVAGAYVNYFRSIPLLLVITWFYLA 75 Query: 152 VLSVL 156 V VL Sbjct: 76 VPFVL 80 >gi|237730631|ref|ZP_04561112.1| glutamate/aspartate transport system permease GltK [Citrobacter sp. 30_2] gi|226906170|gb|EEH92088.1| glutamate/aspartate transport system permease GltK [Citrobacter sp. 30_2] Length = 224 Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 43/127 (33%), Positives = 78/127 (61%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 +S +A S + AA+ +EI+R+G+ ++ RGQ AA+ALG+TH ++ +L++LPQA R+++ Sbjct: 96 RLISAMVAFSMFEAAYYSEIIRAGIQSISRGQSSAALALGMTHWQSMKLIILPQAFRAMV 155 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 P L +Q + L +++SL + AD TI + G +E+IL +Y S+ +L Sbjct: 156 PLLLTQGIVLFQDTSLVYVLSLADFFRTASTIGERDGTQVEMILFAGAVYFVFSLSASLL 215 Query: 385 MNRLNAK 391 ++ L + Sbjct: 216 VSYLKKR 222 Score = 39.7 bits (91), Expect = 0.93, Method: Compositional matrix adjust. Identities = 27/92 (29%), Positives = 49/92 (53%), Gaps = 10/92 (10%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G + T + + ++ + GT++ RLS+ +AW + YV VFR+IP ++V+ + Sbjct: 16 LLDGLIITLKITVTAVVIGIVWGTILAVMRLSSFAPIAWFAKGYVNVFRSIPLVMVLLWF 75 Query: 149 Y-------KSVLSVLPIPD---HSIVLPFGMF 170 Y ++VL + P D S ++ F MF Sbjct: 76 YLIVPGFLQNVLGLSPKTDIRLISAMVAFSMF 107 >gi|332041345|gb|EGI77707.1| polar amino acid ABC transporter, inner membrane subunit [Hylemonella gracilis ATCC 19624] Length = 231 Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 53/133 (39%), Positives = 75/133 (56%), Gaps = 4/133 (3%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 E ++ +AL+ Y AAF+ E +RSG+ +VP Q EA ALGL R ++LPQA+R Sbjct: 99 EAIAAVVALTLYAAAFMGEDLRSGIRSVPAVQFEAGRALGLGFLPTMRFIILPQALRIAT 158 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI--- 381 PPL SQ LNL KNSSLA +G A+L+ + +T ++ E YL++S+ I Sbjct: 159 PPLLSQTLNLWKNSSLATVIGTAELMYAAAKVETETFRSFEAFAFATVCYLTVSLAIGAL 218 Query: 382 -ALFMNRLNAKIA 393 A F R + A Sbjct: 219 AAWFARRYPPRSA 231 >gi|218438819|ref|YP_002377148.1| polar amino acid ABC transporter inner membrane protein [Cyanothece sp. PCC 7424] gi|218171547|gb|ACK70280.1| polar amino acid ABC transporter, inner membrane subunit [Cyanothece sp. PCC 7424] Length = 513 Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 73/250 (29%), Positives = 122/250 (48%), Gaps = 23/250 (9%) Query: 167 FGMFLNNRGLSFPTL---TMDTNAKIFVFSFVL----GIVLSLFATRLSRHFHEKTGKAL 219 FG+ LS P+L D N +F + G V+++ T S F G + Sbjct: 258 FGISPPELPLSAPSLDTENQDFNPTVFYVNLFRNLFRGAVITVILTAFSVFFGLIGGTLV 317 Query: 220 PLLYISTFLIF------------GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFM 267 L IS + I G P LV + + ++F P L Q ++G F Sbjct: 318 ALALISPYQILRLLFRIYVDFFRGTPMLVQL---FIIYFGLPALFQ-QYLGIEWSLDRFP 373 Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327 + +ALS AA++AEI+R G+ ++ +GQ EA +LG+T + + V+ PQA R I+PPL Sbjct: 374 AAVMALSLNVAAYLAEIIRGGIQSIDKGQWEACESLGMTPFQTMQDVIFPQAFRRILPPL 433 Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387 ++++ L+K++SL +GF +L G I+ T +A E+ + +YL L+ + ++ Sbjct: 434 GNEFITLIKDTSLTAIIGFQELFREGQLIVAVTYKAFEVYIAVALVYLILTTLSSIAFKW 493 Query: 388 LNAKIALKEK 397 L + EK Sbjct: 494 LETAMNPLEK 503 >gi|227890364|ref|ZP_04008169.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus johnsonii ATCC 33200] gi|227849178|gb|EEJ59264.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus johnsonii ATCC 33200] Length = 500 Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 43/122 (35%), Positives = 78/122 (63%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IA+ + A++AE +RSG+ ++P+GQMEAA +LGL+ +KA R V++PQA+++I P L ++ Sbjct: 373 IAIGLNSGAYVAEDIRSGIDSLPKGQMEAARSLGLSRQKAFRYVIIPQAIKNIWPALGNE 432 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++ LLK+SSL +G A+L+ + T + + + I M IY ++ + +N Sbjct: 433 FITLLKDSSLVSVIGVAELMYQTQLVQTSTYKGVLPLFIAMIIYFIMTFSLTRLLNHFEK 492 Query: 391 KI 392 ++ Sbjct: 493 RM 494 >gi|118587431|ref|ZP_01544856.1| glutamine ABC transporter, permease/substrate-binding protein [Oenococcus oeni ATCC BAA-1163] gi|118432081|gb|EAV38822.1| glutamine ABC transporter, permease/substrate-binding protein [Oenococcus oeni ATCC BAA-1163] Length = 468 Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 52/176 (29%), Positives = 91/176 (51%), Gaps = 23/176 (13%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 + LPLL ++ F+ GLP L+ + + P F++ + L+ Sbjct: 314 RGLPLLVLAFFIYIGLPHLLNVKI-----------------------PAFVAGILTLTLN 350 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 A+ V+ G ++V +GQMEAA + GL++ +A R V++PQ MR +P L +Q++ LK Sbjct: 351 EGAYTGAFVKGGFLSVDKGQMEAARSNGLSYWQAMRYVVMPQGMRITVPSLINQFIITLK 410 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 ++S+ A+G +L G I+ +T Q +I I IYL + ++ N + +KI Sbjct: 411 DTSILQAIGLVELTQTGNLIVARTQQGFQIWAIVAIIYLVMITLLTWLSNFVQSKI 466 >gi|116491766|ref|YP_811310.1| ABC-type amino acid transport system, permease and periplasmic component [Oenococcus oeni PSU-1] gi|116092491|gb|ABJ57645.1| amino acid ABC transporter membrane protein, PAAT family / amino acid ABC transporter substrate-binding protein, PAAT family [Oenococcus oeni PSU-1] Length = 468 Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 52/176 (29%), Positives = 91/176 (51%), Gaps = 23/176 (13%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 + LPLL ++ F+ GLP L+ + + P F++ + L+ Sbjct: 314 RGLPLLVLAFFIYIGLPHLLNVKI-----------------------PAFVAGILTLTLN 350 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 A+ V+ G ++V +GQMEAA + GL++ +A R V++PQ MR +P L +Q++ LK Sbjct: 351 EGAYTGAFVKGGFLSVDKGQMEAARSNGLSYWQAMRYVVMPQGMRITVPSLINQFIITLK 410 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 ++S+ A+G +L G I+ +T Q +I I IYL + ++ N + +KI Sbjct: 411 DTSILQAIGLVELTQTGNLIVARTQQGFQIWAIVAIIYLVMITLLTWLSNFVQSKI 466 >gi|295096603|emb|CBK85693.1| L-glutamate ABC transporter membrane protein/L-aspartate ABC transporter membrane protein [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 224 Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 43/127 (33%), Positives = 79/127 (62%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 +S +A S + AA+ +EI+R+G+ ++ RGQ AA+ALG+TH ++ +L++LPQA R+++ Sbjct: 96 RLISAMVAFSMFEAAYYSEIIRAGIQSISRGQSSAALALGMTHWQSMKLIILPQAFRAMV 155 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 P L +Q + L +++SL + AD TI + G +E+IL +Y +S+ +L Sbjct: 156 PLLLTQGIVLFQDTSLVYVLSLADFFRTASTIGERDGTQVEMILFAGGVYFVISLSASLL 215 Query: 385 MNRLNAK 391 ++ L + Sbjct: 216 VSWLKKR 222 Score = 40.8 bits (94), Expect = 0.41, Method: Compositional matrix adjust. Identities = 28/78 (35%), Positives = 42/78 (53%), Gaps = 10/78 (12%) Query: 103 GMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY-------KSVLSV 155 +I I GTL+ RLS+ K +AW YV VFR+IP ++V+ + Y ++VL + Sbjct: 30 AIIVGIIWGTLLAVMRLSSFKPLAWFATAYVNVFRSIPLVMVLLWFYLIVPGFLQNVLGL 89 Query: 156 LPIPD---HSIVLPFGMF 170 P D S ++ F MF Sbjct: 90 SPKTDIRLISAMVAFSMF 107 >gi|170724143|ref|YP_001751831.1| polar amino acid ABC transporter inner membrane subunit [Pseudomonas putida W619] gi|169762146|gb|ACA75462.1| polar amino acid ABC transporter, inner membrane subunit [Pseudomonas putida W619] Length = 222 Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 67/213 (31%), Positives = 113/213 (53%), Gaps = 30/213 (14%) Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPL-----LYISTFLIFGLPTLVLIALKYQLHF 246 F VLG L+L RLS K LPL +Y+S F G P LV + + ++F Sbjct: 33 FGLVLGFALALM--RLS--------KILPLDWLARIYVSFFR--GTPLLVQL---FVIYF 77 Query: 247 DKPVLG-QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305 P +G + + I S I LS AA+I EI+R+ + ++ RGQ EAA ++G+ Sbjct: 78 GMPQIGIELDPIPAS---------LIGLSLNMAAYICEILRAAISSIDRGQWEAAASIGM 128 Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365 T +A R +LPQA+R+ +PPL + +++L+K+++LA + +L I +T + Sbjct: 129 TRTQAMRRAILPQALRTALPPLGNSFISLVKDTALAATIQVPELFRQAQLITARTFEVFT 188 Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 + L +Y L ++A F NR+ A++ +++ Sbjct: 189 MYLAVAVVYWILCSILAHFQNRMEARVNQHDQE 221 >gi|148269470|ref|YP_001243930.1| polar amino acid ABC transporter, inner membrane subunit [Thermotoga petrophila RKU-1] gi|147735014|gb|ABQ46354.1| polar amino acid ABC transporter, inner membrane subunit [Thermotoga petrophila RKU-1] Length = 216 Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 60/178 (33%), Positives = 97/178 (54%), Gaps = 30/178 (16%) Query: 217 KALPLLYISTFLI-FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSC 275 + PL+ + FL+ FGLP L L FD+ F + +AL Sbjct: 63 RGTPLM-VQLFLVYFGLPEL-------GLEFDR-----------------FTAAVVALGI 97 Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335 + A++AEIVR+G+ +VP+GQ EAA +LG++H +A V+LPQA R I+P L ++++ L Sbjct: 98 NSGAYVAEIVRAGIQSVPKGQYEAARSLGMSHAQAMIYVILPQAFRHILPALGNEFIALA 157 Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEI----ILIWMFIYLSLSIMIALFMNRLN 389 K+SSLA+ +G +L+ I+++T + I LI+ I S+S ++ RL Sbjct: 158 KDSSLAMVIGTVELMRSAQYIVSRTFMSFPIYGGVALIYFAITFSVSRLVKFVEGRLK 215 Score = 37.4 bits (85), Expect = 4.5, Method: Compositional matrix adjust. Identities = 20/61 (32%), Positives = 32/61 (52%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G + T L ++ IG VG GRLS +++ + +YVE R P +V +F + Sbjct: 15 LLKGALRTLQLTSLAVLIGLAIGIFVGMGRLSKYRIIRYPSSIYVEFLRGTPLMVQLFLV 74 Query: 149 Y 149 Y Sbjct: 75 Y 75 >gi|99080305|ref|YP_612459.1| amino acid ABC transporter permease [Ruegeria sp. TM1040] gi|99036585|gb|ABF63197.1| Amino acid ABC transporter permease protein 3-TM region His/Glu/Gln/Arg/opine [Ruegeria sp. TM1040] Length = 268 Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 48/127 (37%), Positives = 78/127 (61%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +AL +AFIAE+ R+GL +VP GQ+EAA ALGL+ K R V+ PQA+R+I+PPL + Sbjct: 140 VALMIAYSAFIAEVFRAGLQSVPDGQIEAAKALGLSGWKRFRFVVFPQAIRTILPPLGND 199 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++ L+K+SSL +G D+ +G + E + IYL+++I ++L + L Sbjct: 200 FVALVKDSSLVSVLGVLDITQLGKVTAASNFRYFETYNMVALIYLAMTISLSLALRALER 259 Query: 391 KIALKEK 397 + K++ Sbjct: 260 HLRSKQE 266 >gi|330901549|gb|EGH32968.1| glutamine/glutamate ABC transporter permease [Pseudomonas syringae pv. japonica str. M301072PT] Length = 219 Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 56/144 (38%), Positives = 83/144 (57%), Gaps = 13/144 (9%) Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291 +P LV + Y F P+ F+G S P F + LS + A+ + E+VR GL + Sbjct: 66 IPVLVWL---YLFFFGLPI-----FLGLSI--PAFWCAVLVLSLWGASEVGEVVRGGLRS 115 Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 +PRGQ EA +A+GL + VLLPQA++ + PP+ + Y L+K SSLAV +G D+ Sbjct: 116 IPRGQREAGLAIGLGLGQLYGRVLLPQALKRLTPPVINVYTRLIKTSSLAVLIGVVDVTK 175 Query: 352 VGGTIINQTGQAIEIILIWMFIYL 375 VG II +T E +LI+ F++L Sbjct: 176 VGQQIIERT---YESVLIYGFLFL 196 >gi|331702183|ref|YP_004399142.1| polar amino acid ABC transporter inner membrane subunit [Lactobacillus buchneri NRRL B-30929] gi|329129526|gb|AEB74079.1| polar amino acid ABC transporter, inner membrane subunit [Lactobacillus buchneri NRRL B-30929] Length = 234 Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 58/215 (26%), Positives = 111/215 (51%), Gaps = 31/215 (14%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPTLVLIALKYQL 244 + S++ G++L + ++ G + LPL+ I F FGLP + Sbjct: 32 ILSYIFGVILGIIRYVEIKYLSAIVGFVIDIIRNLPLILIIFFTYFGLPNI--------- 82 Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304 G P + S+ IA++ + +A +AEIVR+G++++P GQME A + G Sbjct: 83 --------------GFKPDPIWASV-IAMAVFESAMVAEIVRAGIVSIPVGQMEGARSTG 127 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ-TGQA 363 +++ +A R ++LPQA++++IP + SQ+++L+K++SLA + DL++ I Q T Sbjct: 128 MSYWQALRYIILPQAIKNMIPAIVSQFISLVKDTSLATIIVLPDLMNHAQIIYGQNTNYT 187 Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 I + L +Y + ++L L+ ++ +K Sbjct: 188 IPMFLALAVMYFIVCYSLSLLSQYLDHRLGTAKKS 222 >gi|93005166|ref|YP_579603.1| amino acid ABC transporter permease [Psychrobacter cryohalolentis K5] gi|92392844|gb|ABE74119.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Psychrobacter cryohalolentis K5] Length = 248 Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 61/186 (32%), Positives = 100/186 (53%), Gaps = 4/186 (2%) Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH--FDKPVLGQFNFIGGSTVSPEF 266 R K +A+ Y++ F +P LV + + + + P + ++ + S + Sbjct: 54 RTLPNKGARAIGTAYVTFFR--NIPLLVQLFFWFYIAPGWLTPSIQEWWYKDLSPNTSAM 111 Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326 +S I L +TAA I E VR+G+ ++P+GQ+ AA ALG + +A + VLLPQA R I+PP Sbjct: 112 LSASIGLGLFTAARIVEQVRTGIESLPQGQINAAYALGFSIPQAYKEVLLPQAFRIILPP 171 Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386 L+S+ N KN+S+A VG +L+S TI T ++EI IYL ++ + M Sbjct: 172 LSSELTNCFKNASVASLVGVMELISQTKTISEYTQNSLEIYTYATIIYLVFNLSLIAIMG 231 Query: 387 RLNAKI 392 + K+ Sbjct: 232 LIERKL 237 >gi|311280450|ref|YP_003942681.1| polar amino acid ABC transporter, inner membrane subunit [Enterobacter cloacae SCF1] gi|308749645|gb|ADO49397.1| polar amino acid ABC transporter, inner membrane subunit [Enterobacter cloacae SCF1] Length = 224 Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 43/127 (33%), Positives = 79/127 (62%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 +S +A S + AA+ +EI+R+G+ ++ RGQ AA+ALG+TH ++ +L++LPQA R+++ Sbjct: 96 RLISAMVAFSMFEAAYYSEIIRAGIQSISRGQSSAALALGMTHWQSMQLIILPQAFRAMV 155 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 P L +Q + L +++SL + AD TI + G +E+IL +Y +S+ +L Sbjct: 156 PLLLTQGIVLFQDTSLVYVLSLADFFRTASTIGERDGTQVEMILFAGAVYFVISLSASLL 215 Query: 385 MNRLNAK 391 ++ L + Sbjct: 216 VSWLKKR 222 Score = 38.5 bits (88), Expect = 2.0, Method: Compositional matrix adjust. Identities = 26/89 (29%), Positives = 46/89 (51%), Gaps = 10/89 (11%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY-- 149 G + T + + ++ + GTL+ RLS+ V+W + YV VFR++P ++V+ + Y Sbjct: 19 GLLITLKITVTAIVIGIVWGTLLAVMRLSSFLPVSWFAKAYVNVFRSVPLVMVLLWFYLI 78 Query: 150 -----KSVLSVLPIPD---HSIVLPFGMF 170 + VL + P D S ++ F MF Sbjct: 79 VPGFLQQVLGLSPKTDIRLISAMVAFSMF 107 >gi|186471954|ref|YP_001863272.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia phymatum STM815] gi|184198263|gb|ACC76226.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia phymatum STM815] Length = 243 Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 56/143 (39%), Positives = 78/143 (54%), Gaps = 6/143 (4%) Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPV-LGQFNFIGGSTVSP-EFMSLYIALSCYT 277 PLL F FG TL+ ++ L+ + LG F P EF++ ++ L+CY Sbjct: 64 PLLVQLLFWYFGAATLLPRSMMEWLNAPHAISLGVFTL----AWPPFEFVAGWVGLTCYA 119 Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 F+ E R+G+ V GQ AA ALGLT R V+LPQA+R PPL QY+N++KN Sbjct: 120 TTFVGEEFRAGIRGVASGQHRAAAALGLTPFATFRHVILPQAIRIATPPLAGQYMNIVKN 179 Query: 338 SSLAVAVGFADLVSVGGTIINQT 360 SSL +A+G A+L I +T Sbjct: 180 SSLTMAIGLAELSYTSRQIDTET 202 Score = 37.7 bits (86), Expect = 3.3, Method: Compositional matrix adjust. Identities = 24/76 (31%), Positives = 39/76 (51%) Query: 82 DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141 + Y + GF T L ++ AT++G + R + +++VA +YV VFRN P Sbjct: 6 EPKYVAWLAHGFGLTLLLCACAIVTATLLGFALALARNARSRVVARAASLYVLVFRNSPL 65 Query: 142 LVVIFFLYKSVLSVLP 157 LV + F Y ++LP Sbjct: 66 LVQLLFWYFGAATLLP 81 >gi|329939723|ref|ZP_08289024.1| putative arginine/ornithine ABC transporter permease protein [Streptomyces griseoaurantiacus M045] gi|329301293|gb|EGG45188.1| putative arginine/ornithine ABC transporter permease protein [Streptomyces griseoaurantiacus M045] Length = 308 Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 59/166 (35%), Positives = 94/166 (56%), Gaps = 6/166 (3%) Query: 231 GLPTLVLIALKYQLHFDKPVL--GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288 G P LV + L Y + P+L G + ++P F++ + L AA+++EIVR+G Sbjct: 113 GTPVLVQLLLWYNIALIFPILNLGFYKDEMNQVMTP-FLAALLGLGLNEAAYMSEIVRAG 171 Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348 + +V GQ EA+ ALG+T K R V+LPQAMR I+PP ++++N+LK SSLA AV F + Sbjct: 172 IQSVDMGQTEASHALGMTQGKTLRRVVLPQAMRVIVPPTGNEFINMLKTSSLAYAVQFNE 231 Query: 349 LVSVGGTIINQTGQAIEIIL---IWMFIYLSLSIMIALFMNRLNAK 391 L+ I + + +E+ IW I S+ + ++ R A+ Sbjct: 232 LIKRSTDISSTSLAVVELYFVASIWYLILTSVFSVGQYYLERRYAR 277 >gi|253575036|ref|ZP_04852375.1| polar amino acid ABC transporter [Paenibacillus sp. oral taxon 786 str. D14] gi|251845492|gb|EES73501.1| polar amino acid ABC transporter [Paenibacillus sp. oral taxon 786 str. D14] Length = 216 Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 57/175 (32%), Positives = 103/175 (58%), Gaps = 12/175 (6%) Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279 P++ + LI LP L++I + + F P +G + +TV+ L+ + AA Sbjct: 53 PIMLVGVELIRNLPLLLII---FFMRFALPEVGIKLGLVAATVT--------GLTIFEAA 101 Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339 I+EIVRSGL ++ +GQ+EAA + GL+ + ++LPQ +R ++PPL SQ+++LLK++S Sbjct: 102 MISEIVRSGLASIDKGQIEAARSSGLSAVQTLWHIVLPQGLRRMVPPLVSQFISLLKDTS 161 Query: 340 LAVAVGFADLVSVGGTIINQT-GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393 LAV + +L+ G +I I I+L+ IY +++ ++++ +L A+ A Sbjct: 162 LAVVISLPELMHHAGIVIGHGYTYTIPILLLVALIYFTVNFVLSVISRQLEARRA 216 >gi|146318682|ref|YP_001198394.1| amino acid ABC transporter periplasmic protein [Streptococcus suis 05ZYH33] gi|145689488|gb|ABP89994.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Streptococcus suis 05ZYH33] Length = 179 Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 52/159 (32%), Positives = 92/159 (57%), Gaps = 17/159 (10%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 + +PL+ ++ F+ +G+P L+ + + GQ + I +F++ IALS Sbjct: 20 RGIPLMIVAAFIFWGIPNLI-----------ESMTGQQSPIN------DFVAGTIALSLN 62 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 + A+IAEIVR G+ AVP GQMEA+ +LG+++ R ++LPQA + ++P +Q++ LK Sbjct: 63 SGAYIAEIVRGGIQAVPAGQMEASRSLGISYGTTMRKIILPQAGKIMLPNFINQFVITLK 122 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375 ++++ A+G +L G II + Q+ + I IYL Sbjct: 123 DTTIISAIGLVELFQAGKIIIARNYQSFRMYAILAIIYL 161 >gi|268319123|ref|YP_003292779.1| ABC transporter permease component [Lactobacillus johnsonii FI9785] gi|262397498|emb|CAX66512.1| ABC transporter permease component [Lactobacillus johnsonii FI9785] Length = 497 Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 43/122 (35%), Positives = 78/122 (63%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IA+ + A++AE +RSG+ ++P+GQMEAA +LGL+ +KA R V++PQA+++I P L ++ Sbjct: 370 IAIGLNSGAYVAEDIRSGIDSLPKGQMEAARSLGLSRQKAFRYVIIPQAIKNIWPALGNE 429 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++ LLK+SSL +G A+L+ + T + + + I M IY ++ + +N Sbjct: 430 FITLLKDSSLVSVIGVAELMYQTQLVQTSTYKGVLPLFIAMIIYFIMTFSLTRLLNHFEK 489 Query: 391 KI 392 ++ Sbjct: 490 RM 491 >gi|253689072|ref|YP_003018262.1| polar amino acid ABC transporter, inner membrane subunit [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251755650|gb|ACT13726.1| polar amino acid ABC transporter, inner membrane subunit [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 225 Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 47/138 (34%), Positives = 84/138 (60%), Gaps = 1/138 (0%) Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320 T SP F + IALS + AF AE+ R + ++ GQ E A ALG+ A R V+LPQA+ Sbjct: 87 TFSP-FTAAVIALSAQSGAFYAEVYRGAISSIHAGQWEGAKALGMPKSTALRRVILPQAL 145 Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380 R +IPP + L+K++SLA ++ +++L+ I +QT + +E+ + +Y +L ++ Sbjct: 146 RRMIPPFIERSFELIKSTSLASSLAYSELLYQAMQINSQTYRPLEVYSLVAVMYFTLLLL 205 Query: 381 IALFMNRLNAKIALKEKK 398 I+LF + +++L +++ Sbjct: 206 ISLFSQHIEKRLSLADRR 223 >gi|42518711|ref|NP_964641.1| ABC transporter permease component [Lactobacillus johnsonii NCC 533] gi|41582997|gb|AAS08607.1| ABC transporter permease component [Lactobacillus johnsonii NCC 533] Length = 497 Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 43/122 (35%), Positives = 78/122 (63%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IA+ + A++AE +RSG+ ++P+GQMEAA +LGL+ +KA R V++PQA+++I P L ++ Sbjct: 370 IAIGLNSGAYVAEDIRSGIDSLPKGQMEAARSLGLSRQKAFRYVIIPQAIKNIWPALGNE 429 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++ LLK+SSL +G A+L+ + T + + + I M IY ++ + +N Sbjct: 430 FITLLKDSSLVSVIGVAELMYQTQLVQTSTYKGVLPLFIAMIIYFIMTFSLTRLLNHFEK 489 Query: 391 KI 392 ++ Sbjct: 490 RM 491 >gi|332111812|gb|EGJ11792.1| putative ABC transporter protein glutamate/aspartate transmembrane subunit [Rubrivivax benzoatilyticus JA2] Length = 245 Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 47/105 (44%), Positives = 69/105 (65%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P F+ + AL +T+A I+E VR+G+ ++PRGQ A +A+GLT + R VLLP A R I Sbjct: 108 PSFVLVVFALGFFTSARISEQVRAGIQSLPRGQRYAGLAMGLTLPQTYRYVLLPMAFRII 167 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368 +PPLTS+ +N++KNSS+A AV A+L +T + IE+ L Sbjct: 168 VPPLTSEAMNIIKNSSVAFAVSIAELTMFALQAGEETSRNIEMYL 212 Score = 42.7 bits (99), Expect = 0.10, Method: Compositional matrix adjust. Identities = 25/90 (27%), Positives = 45/90 (50%) Query: 63 FLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN 122 F +E E+ G D +Y ++ + T ++ +I A + G+L+G R + + Sbjct: 8 FCTETVTGEVLPGCFGRGGDITYLNWLMSAWGWTLSVSALALIVALVFGSLMGILRTTPD 67 Query: 123 KLVAWICRVYVEVFRNIPPLVVIFFLYKSV 152 + + W + E+FRNIP LV IF Y ++ Sbjct: 68 RRLVWFGNAWTELFRNIPLLVQIFLWYHAL 97 >gi|330982420|gb|EGH80523.1| glutamine/glutamate ABC transporter permease [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 219 Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 56/144 (38%), Positives = 83/144 (57%), Gaps = 13/144 (9%) Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291 +P LV + Y F P+ F+G S P F + LS + A+ + E+VR GL + Sbjct: 66 IPVLVWL---YLFFFGLPI-----FLGLSI--PAFWCAVLVLSLWGASEVGEVVRGGLRS 115 Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 +PRGQ EA +A+GL + VLLPQA++ + PP+ + Y L+K SSLAV +G D+ Sbjct: 116 IPRGQREAGLAIGLGLGQLYGRVLLPQALKRLTPPVINVYTRLIKTSSLAVLIGVVDVTK 175 Query: 352 VGGTIINQTGQAIEIILIWMFIYL 375 VG II +T E +LI+ F++L Sbjct: 176 VGQQIIERT---YESVLIYGFLFL 196 >gi|330944618|gb|EGH46568.1| amino acid ABC transporter permease [Pseudomonas syringae pv. pisi str. 1704B] Length = 164 Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 56/144 (38%), Positives = 83/144 (57%), Gaps = 13/144 (9%) Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291 +P LV + Y F P+ F+G S P F + LS + A+ + E+VR GL + Sbjct: 11 IPVLVWL---YLFFFGLPI-----FLGLSI--PAFWCAVLVLSLWGASEVGEVVRGGLRS 60 Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 +PRGQ EA +A+GL + VLLPQA++ + PP+ + Y L+K SSLAV +G D+ Sbjct: 61 IPRGQREAGLAIGLGLGQLYGRVLLPQALKRLTPPVINVYTRLIKTSSLAVLIGVVDVTK 120 Query: 352 VGGTIINQTGQAIEIILIWMFIYL 375 VG II +T E +LI+ F++L Sbjct: 121 VGQQIIERT---YESVLIYGFLFL 141 >gi|170758808|ref|YP_001786563.1| His/Glu/Gln/Arg/opine ABC transporter permease [Clostridium botulinum A3 str. Loch Maree] gi|169405797|gb|ACA54208.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Clostridium botulinum A3 str. Loch Maree] Length = 222 Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 57/177 (32%), Positives = 104/177 (58%), Gaps = 17/177 (9%) Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235 L + +T+ + + + G++L++ R + K ++ +YIS F G P L Sbjct: 17 LKYAHITLSIAILSMIIAVLFGVILAVI-----RMYKVKVLHSISEIYISFFR--GTPIL 69 Query: 236 VLIALKYQLHFDKP-VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294 + + L Y + P ++ F I P +M++ IALS +A++AEI+R ++++ + Sbjct: 70 IQLFLFY---YGLPQIIPSFKEI------PAYMAVVIALSMNGSAYMAEIIRGAIMSIDK 120 Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 GQMEA+++LG+T +A + ++LPQA R IP L + +++LLK+SSLA VG A+++S Sbjct: 121 GQMEASLSLGMTEFQAMKRIILPQAARVAIPSLGNSFIDLLKSSSLAFTVGVAEILS 177 >gi|146342963|ref|YP_001208011.1| glutamate/aspartate ABC transporter permease [Bradyrhizobium sp. ORS278] gi|146195769|emb|CAL79796.1| glutamate/aspartate ABC transporter (permease protein) [Bradyrhizobium sp. ORS278] Length = 230 Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 60/213 (28%), Positives = 114/213 (53%), Gaps = 14/213 (6%) Query: 194 FVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG---------LPTLVLIALKYQL 244 F+ G+ +L T LS G + ++ +S + + G + +L L+ + + Sbjct: 18 FIDGMTFTLTLTALSAFGGLVFGTLIAMMRLSGYRVMGWIAGLYVDFMRSLPLVLVIFWF 77 Query: 245 HFDKPVLGQFNFIGGSTVSPE---FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301 +F P +GQ+ I GS+ + F S I + AA+ +EI+R+G+ ++ RGQ AA Sbjct: 78 YFLVPYIGQW--ITGSSRPIKVGAFASSLITFIMFEAAYFSEIMRAGIQSISRGQPAAAS 135 Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361 ALGLT+ + R V+LPQA R+++P L +Q + L +++SL + D + + + G Sbjct: 136 ALGLTYAQTMRYVVLPQAFRNMLPVLLTQTIVLFQDTSLVYVLSIPDFLGAASKVAQRDG 195 Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394 + +E+ L +Y ++S + + + RL ++IA+ Sbjct: 196 RLVEMYLFAALVYFTISCIASYGVRRLQSRIAI 228 Score = 40.4 bits (93), Expect = 0.43, Method: Compositional matrix adjust. Identities = 19/50 (38%), Positives = 32/50 (64%), Gaps = 4/50 (8%) Query: 100 AFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 AF G++ GTL+ RLS +++ WI +YV+ R++P ++VIF+ Y Sbjct: 33 AFGGLV----FGTLIAMMRLSGYRVMGWIAGLYVDFMRSLPLVLVIFWFY 78 >gi|13472038|ref|NP_103605.1| permease protein of amino acid ABC transporter [Mesorhizobium loti MAFF303099] gi|14022783|dbj|BAB49391.1| permease protein of amino acid ABC transporter [Mesorhizobium loti MAFF303099] Length = 224 Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 44/94 (46%), Positives = 64/94 (68%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + IAL+ A FI EIV +G+ +VP GQ+EAA+A GL+ + R V+LPQAMR ++P Sbjct: 89 FTAGIIALTNLAACFICEIVAAGIRSVPTGQVEAALASGLSRWQRMRQVVLPQAMRIVMP 148 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359 PL QY+ L+K+SS+ A+G DL VG ++ + Sbjct: 149 PLVGQYVLLIKDSSVVSAIGLTDLTRVGWLVVQR 182 >gi|110632402|ref|YP_672610.1| polar amino acid ABC transporter, inner membrane subunit [Mesorhizobium sp. BNC1] gi|110283386|gb|ABG61445.1| amino acid ABC transporter membrane protein, PAAT family [Chelativorans sp. BNC1] Length = 309 Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 52/142 (36%), Positives = 86/142 (60%), Gaps = 6/142 (4%) Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308 P LG + S +SP + I L+ + AA++AEI+R GL++V RGQ+EA A G++ Sbjct: 150 PELGAWE--TNSLISP-LTAAIIGLALHEAAYMAEIIRGGLLSVDRGQIEATQAFGMSRA 206 Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368 +A R V+LPQAMR I+PP +Q+++++K +SL + +DL+ I N+T + I ++L Sbjct: 207 RALRRVILPQAMRFIVPPSGNQFISMVKATSLVSVIAMSDLLYSVQAIYNRTFEVIPLLL 266 Query: 369 I---WMFIYLSLSIMIALFMNR 387 + W +SL + F+ R Sbjct: 267 VAAAWYLFIVSLLNVGQEFLER 288 >gi|206895967|ref|YP_002246908.1| glutamine ABC transporter, permease protein [Coprothermobacter proteolyticus DSM 5265] gi|206738584|gb|ACI17662.1| glutamine ABC transporter, permease protein [Coprothermobacter proteolyticus DSM 5265] Length = 216 Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 57/146 (39%), Positives = 83/146 (56%), Gaps = 13/146 (8%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 K + + YI LI G P L+ I L Y F P LG N + +AL Sbjct: 52 KGISIAYIE--LIRGTPALMQIMLVY---FGLPALG-LNI-------DRLTAAVVALGLN 98 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 +AA+ EI R+G+ ++ RGQMEAA A+G+T A RL++LPQA R +IPPL ++++ LLK Sbjct: 99 SAAYSGEIFRAGIESIDRGQMEAARAIGMTGSMAMRLIVLPQAFRVVIPPLVNEFVALLK 158 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQ 362 ++SL +G ADL+ +I+ T Sbjct: 159 DTSLVSVIGVADLMLRSRNMISYTAN 184 >gi|317484847|ref|ZP_07943739.1| His/Glu/Gln/Arg/opine family amino ABC transporter [Bilophila wadsworthia 3_1_6] gi|316923893|gb|EFV45087.1| His/Glu/Gln/Arg/opine family amino ABC transporter [Bilophila wadsworthia 3_1_6] Length = 264 Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 60/167 (35%), Positives = 97/167 (58%), Gaps = 11/167 (6%) Query: 233 PTLVLIALKY-QLHFDKPVLGQFNFI----GGSTVSPEFMSLYIALS-CYTAAFIAEIVR 286 P + LIA Y ++ P+L Q +I G P +S IA+S CY A++ E+ R Sbjct: 92 PVINLIASTYVEIIRGVPLLVQLFYIYYALGRIIQVPPMVSAVIAISFCY-GAYMGEVFR 150 Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346 +G+++VP+GQ EAA +LG + + LV+LPQAMR+I+PP+ ++ + +LK++SL + Sbjct: 151 AGILSVPKGQTEAARSLGFNNFQTMTLVILPQAMRTILPPIGNECIAMLKDTSLVSIIAV 210 Query: 347 ADLVSVGGTIINQTGQAIE----IILIWMFIYLSLSIMIALFMNRLN 389 ADL+ G +QT E I L+++ I L LS +++ RL Sbjct: 211 ADLLRRGREFASQTFDYFETYTVIALVYLIITLLLSKGVSMMEGRLT 257 Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust. Identities = 23/68 (33%), Positives = 39/68 (57%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151 G + TF + ++ IG L G GRLS N ++ I YVE+ R +P LV +F++Y + Sbjct: 61 GLIITFEVTVLSLLCTLPIGLLTGLGRLSRNPVINLIASTYVEIIRGVPLLVQLFYIYYA 120 Query: 152 VLSVLPIP 159 + ++ +P Sbjct: 121 LGRIIQVP 128 >gi|238758198|ref|ZP_04619377.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Yersinia aldovae ATCC 35236] gi|238703528|gb|EEP96066.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Yersinia aldovae ATCC 35236] Length = 255 Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 42/133 (31%), Positives = 79/133 (59%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+S +A++ A+++EI R+G+ ++ RGQMEA+ +LG+++ K R V+LPQA R ++P Sbjct: 122 FLSCVVAITLNAGAYVSEIFRAGIQSIDRGQMEASRSLGMSYGKTMRKVILPQAFRRMLP 181 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PL + + ++K+SSLA A+G ADL T+ E L +Y ++ +++L + Sbjct: 182 PLGNNAIAIVKDSSLASAIGLADLAYAARTVSGAYATYWEPYLAISVVYWVITFLLSLLV 241 Query: 386 NRLNAKIALKEKK 398 + + + + Sbjct: 242 RHMEKRFGKSDSR 254 >gi|22536880|ref|NP_687731.1| amino acid ABC transporter, permease protein [Streptococcus agalactiae 2603V/R] gi|76787176|ref|YP_329464.1| polar amino acid ABC transporter permease [Streptococcus agalactiae A909] gi|76798197|ref|ZP_00780448.1| amino acid ABC transporter, permease protein [Streptococcus agalactiae 18RS21] gi|22533730|gb|AAM99603.1|AE014224_6 amino acid ABC transporter, permease protein [Streptococcus agalactiae 2603V/R] gi|76562233|gb|ABA44817.1| polar amino acid uptake (PAAT) family ABC transporter, permease protein [Streptococcus agalactiae A909] gi|76586460|gb|EAO62967.1| amino acid ABC transporter, permease protein [Streptococcus agalactiae 18RS21] Length = 231 Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 43/115 (37%), Positives = 72/115 (62%), Gaps = 8/115 (6%) Query: 247 DKPVLGQFNFI--------GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQME 298 + P+L Q F+ G + F + + + Y A+I+E++RSG+ AVP+GQ E Sbjct: 73 NTPLLVQMVFVYYGLAIISNGHVMISAFFTAVLCVGLYHGAYISEVIRSGIEAVPKGQTE 132 Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353 AA+A G T + +L++LPQA+R+I+PP+T+Q +NL+KN+S + AD++ V Sbjct: 133 AALAQGFTANQTMQLIILPQAVRTILPPMTNQVVNLIKNTSTVAIISGADIMFVA 187 >gi|148546354|ref|YP_001266456.1| polar amino acid ABC transporter inner membrane subunit [Pseudomonas putida F1] gi|167035335|ref|YP_001670566.1| polar amino acid ABC transporter inner membrane subunit [Pseudomonas putida GB-1] gi|148510412|gb|ABQ77272.1| polar amino acid ABC transporter, inner membrane subunit [Pseudomonas putida F1] gi|166861823|gb|ABZ00231.1| polar amino acid ABC transporter, inner membrane subunit [Pseudomonas putida GB-1] Length = 248 Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 49/128 (38%), Positives = 77/128 (60%) Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326 +S+ I L +TAA + E VR+G+ A+P+GQ AA A+G + + VLLPQA R IIPP Sbjct: 112 ISVVICLGLFTAARVCEQVRTGIQALPKGQEAAARAMGFSLPQIYNNVLLPQAYRIIIPP 171 Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386 LTS++LN+ KNSS+A +G +L++ + E + IY +L++ + L M Sbjct: 172 LTSEFLNVFKNSSVASLIGLMELLAQTKQTAEFSANLFEAFTLATLIYFTLNMGLMLLMR 231 Query: 387 RLNAKIAL 394 + K+A+ Sbjct: 232 MVEKKVAV 239 Score = 42.0 bits (97), Expect = 0.17, Method: Compositional matrix adjust. Identities = 21/49 (42%), Positives = 32/49 (65%) Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLP 157 ++G+++G R N+LV+ I YVE+FRN+P LV +F Y V +LP Sbjct: 45 LLGSVLGVMRTVPNRLVSGIATAYVELFRNVPLLVQLFIWYFLVPDLLP 93 >gi|300727963|ref|ZP_07061341.1| ABC-type amino acid transport/signal transduction system [Prevotella bryantii B14] gi|299774805|gb|EFI71419.1| ABC-type amino acid transport/signal transduction system [Prevotella bryantii B14] Length = 496 Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 56/207 (27%), Positives = 116/207 (56%), Gaps = 14/207 (6%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 + S +LG ++++ T R+ + K L +Y++ ++ G PT+V + + Y + F Sbjct: 303 IISLILGSLIAIVRTSHDRNGNMKFLNTLCRVYLT--IVRGTPTMVQLLIIYYVIF---- 356 Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 + VS +++ +A +AA++AE++RSG++++ RGQMEA +LG+++ + Sbjct: 357 -------ASADVSKVVVAI-VAFGLNSAAYLAEVIRSGIMSIDRGQMEAGRSLGMSYAQT 408 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370 R V+LPQA ++++P + ++ + LLK +S++ +G DL I + T A+ + + Sbjct: 409 MRFVILPQAYKNVLPAIGNELITLLKETSISGYIGLVDLTKGSDIIRSITYDAMLPLGVV 468 Query: 371 MFIYLSLSIMIALFMNRLNAKIALKEK 397 IYL L + + ++R+ K+ E+ Sbjct: 469 ALIYLVLVMSLEAGVSRIEKKLRKNER 495 >gi|261400733|ref|ZP_05986858.1| polar amino amino acid ABC transporter, PAAT family, permease protein [Neisseria lactamica ATCC 23970] gi|269209498|gb|EEZ75953.1| polar amino amino acid ABC transporter, PAAT family, permease protein [Neisseria lactamica ATCC 23970] Length = 248 Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 46/121 (38%), Positives = 74/121 (61%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +AL + A+I EI R+G+ ++ +GQMEAA +LG+T+ +A R V+LPQA+R ++PPL S+ Sbjct: 122 LALVANSGAYICEIFRAGIQSIDKGQMEAARSLGMTYPQAMRYVILPQALRRMLPPLASE 181 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++ LLK+SSL + A+L V TI + E + IYL ++ + RL Sbjct: 182 FITLLKDSSLLSVIAVAELAYVQNTITGRYSVYEEPLYTVALIYLLMTTFLGWIFLRLEK 241 Query: 391 K 391 + Sbjct: 242 R 242 >gi|50914605|ref|YP_060577.1| arginine ABC transporter permease [Streptococcus pyogenes MGAS10394] gi|50903679|gb|AAT87394.1| Arginine transport system permease protein [Streptococcus pyogenes MGAS10394] Length = 228 Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 58/189 (30%), Positives = 107/189 (56%), Gaps = 16/189 (8%) Query: 214 KTGKALPLLYISTFLIF---GLPTLVLIALKYQ-LHFDK-PVLG----QFNFIGGSTVSP 264 K PL ++ ++ G P +V I + + +HF+ P +G F+F S + P Sbjct: 42 KRSHVKPLTWVVNLYVWIFRGTPMVVQIMIAFAWMHFNNMPTIGFGVLDFDF---SRLLP 98 Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 I +S + A+I+EIVR+G+ AVP+GQ+EAA +LG+ + A R V+LPQA ++I+ Sbjct: 99 GI----IIISLNSGAYISEIVRAGIEAVPKGQLEAAYSLGIRPQNAMRYVILPQAFKNIL 154 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 P L ++++ ++K+S+L +G +L + +++ T I +L+ F YL ++ ++A Sbjct: 155 PALGNEFITIIKDSALLQTIGVMELWNGAQSVVTATYSPISPLLVAAFYYLMVTTVMAQL 214 Query: 385 MNRLNAKIA 393 + L +A Sbjct: 215 LAVLERHMA 223 >gi|46579090|ref|YP_009898.1| His/Glu/Gln/Arg/opine ABC transporter permease [Desulfovibrio vulgaris str. Hildenborough] gi|120603329|ref|YP_967729.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio vulgaris DP4] gi|46448503|gb|AAS95157.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Desulfovibrio vulgaris str. Hildenborough] gi|120563558|gb|ABM29302.1| amino acid ABC transporter membrane protein 2, PAAT family [Desulfovibrio vulgaris DP4] Length = 295 Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 44/126 (34%), Positives = 76/126 (60%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+S + L+ Y A+I+EIVR+G+ +VPRGQ +A+ + GL + R V+LPQA+R +P Sbjct: 165 FLSAVVTLAIYEGAYISEIVRAGIESVPRGQWDASSSFGLGPVQQMRHVILPQALRHAVP 224 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PL Q+++++K+S++ + +L G ++ T Q EI +YL L++ +L Sbjct: 225 PLAGQFISIIKDSAIVSVISVPELTFQGMELMAATYQTFEIWTTIALLYLVLTLGCSLVA 284 Query: 386 NRLNAK 391 RL + Sbjct: 285 ERLERR 290 >gi|317407536|gb|EFV87487.1| hypothetical protein HMPREF0005_05080 [Achromobacter xylosoxidans C54] Length = 200 Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 55/175 (31%), Positives = 91/175 (52%), Gaps = 4/175 (2%) Query: 13 FSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEI 72 F R+ F D R ++ Q+++A W N + N+ + +++G +L E A F I Sbjct: 2 FKRLWF--DGRARSVLAQLLIAGAFVGGVGWLAWNAHANLTQRGIAMGFDYLGEAARFPI 59 Query: 73 DQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVY 132 + ++ Y SY A LVG VNT +++ + +T++G + R S + LV + VY Sbjct: 60 AESLLAYQPTDSYGRAFLVGLVNTLYISALVIAASTLLGFGLALARRSRHPLVTGVATVY 119 Query: 133 VEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPF-GMFLNNRGLSFPTLTMDTN 186 +E RN P +V + F Y V LP P + P G+FL+ RGL FP+L++ + Sbjct: 120 LEAVRNTPLVVQLLFWYSLVTINLP-PARQALQPLPGVFLSVRGLFFPSLSLQGD 173 >gi|312882264|ref|ZP_07742010.1| ABC-type amino acid transport system permease component [Vibrio caribbenthicus ATCC BAA-2122] gi|309370108|gb|EFP97614.1| ABC-type amino acid transport system permease component [Vibrio caribbenthicus ATCC BAA-2122] Length = 246 Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 48/130 (36%), Positives = 79/130 (60%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 F + IALS +AF+AE+ R G+ A+ RGQ EAA +LGL + + RLV+LPQA+R I+ Sbjct: 114 HFWAGVIALSIAESAFMAEVFRGGIQAIRRGQHEAAHSLGLGYWQTMRLVILPQALRQIL 173 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 PPL +Q++ +LK SSL +G +DL ++ +EI + YL L ++++ Sbjct: 174 PPLGNQFVYILKMSSLVSVIGLSDLTRRANELVVNEYLPLEIYTFLVIEYLVLILLVSQA 233 Query: 385 MNRLNAKIAL 394 + + ++A+ Sbjct: 234 VRWVEKRVAI 243 >gi|26987806|ref|NP_743231.1| polar amino acid ABC transporter inner membrane subunit [Pseudomonas putida KT2440] gi|24982503|gb|AAN66695.1|AE016297_9 amino acid ABC transporter, permease protein [Pseudomonas putida KT2440] gi|313497436|gb|ADR58802.1| Polar amino acid ABC transporter inner membrane subunit [Pseudomonas putida BIRD-1] Length = 248 Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 49/128 (38%), Positives = 77/128 (60%) Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326 +S+ I L +TAA + E VR+G+ A+P+GQ AA A+G + + VLLPQA R IIPP Sbjct: 112 ISVVICLGLFTAARVCEQVRTGIQALPKGQEAAARAMGFSLPQIYNNVLLPQAYRIIIPP 171 Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386 LTS++LN+ KNSS+A +G +L++ + E + IY +L++ + L M Sbjct: 172 LTSEFLNVFKNSSVASLIGLMELLAQTKQTAEFSANLFEAFTLATLIYFTLNMGLMLLMR 231 Query: 387 RLNAKIAL 394 + K+A+ Sbjct: 232 MVEKKVAV 239 Score = 43.1 bits (100), Expect = 0.069, Method: Compositional matrix adjust. Identities = 22/49 (44%), Positives = 32/49 (65%) Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLP 157 ++G+L+G R N+LV+ I YVE+FRN+P LV +F Y V +LP Sbjct: 45 LLGSLLGVMRTVPNRLVSGIATAYVELFRNVPLLVQLFIWYFLVPDLLP 93 >gi|85704884|ref|ZP_01035985.1| glutamate/aspartate ABC transporter, permease protein [Roseovarius sp. 217] gi|85670702|gb|EAQ25562.1| glutamate/aspartate ABC transporter, permease protein [Roseovarius sp. 217] Length = 239 Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 49/127 (38%), Positives = 74/127 (58%) Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322 PEF++ +AL YTA+ +AE VR+G+ AVP G AA A G+ + R VLLP + R Sbjct: 100 QPEFVTAVVALGLYTASRVAEQVRAGIEAVPTGLKSAATAQGMRVSQVYRYVLLPISFRL 159 Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382 I+PP+TS++L + KNSSLA+ +G +L + I T Q+ E IY+ +++ Sbjct: 160 IVPPMTSEFLTVFKNSSLALTIGLLELTAQSQQIAEYTFQSFEAYTAATIIYVLIALCAT 219 Query: 383 LFMNRLN 389 + M L Sbjct: 220 IVMTVLE 226 Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 30/76 (39%), Positives = 45/76 (59%) Query: 82 DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141 + Y +L G T +A + A ++G+LVG GR NK+V+ +C YVE+FRN+P Sbjct: 12 EPEYFGWLLSGLGWTVSVALCAWVIAMVVGSLVGVGRTLPNKVVSTVCTAYVELFRNVPL 71 Query: 142 LVVIFFLYKSVLSVLP 157 LV +F Y +V +LP Sbjct: 72 LVQMFIWYFAVPEMLP 87 >gi|228940614|ref|ZP_04103180.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228973534|ref|ZP_04134118.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228980092|ref|ZP_04140408.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus thuringiensis Bt407] gi|228779678|gb|EEM27929.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus thuringiensis Bt407] gi|228786229|gb|EEM34224.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228819120|gb|EEM65179.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus thuringiensis serovar berliner ATCC 10792] gi|326941247|gb|AEA17143.1| cystine transport system permease [Bacillus thuringiensis serovar chinensis CT-43] Length = 222 Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 66/222 (29%), Positives = 116/222 (52%), Gaps = 21/222 (9%) Query: 177 SFPTL------TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230 SFP L T+ + SFV+GI L++ +++ + ++ +YIS F Sbjct: 11 SFPQLFKYVYITLGITVVSMIISFVIGIGLAIITKNKTKYLY-----SIARVYISFFR-- 63 Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290 G P LV + + L+F P TV + I LS AA+++EI+R L Sbjct: 64 GTPLLVQL---FVLYFGLP-----QIFPTFTVLTAMQATLIGLSLNNAAYLSEIIRGSLN 115 Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 AV GQM+A +++G+T +A R ++ PQA+R +P L + ++ LLK SSL+ A+G A+++ Sbjct: 116 AVESGQMDACLSVGMTKAQAMRQIIFPQAIRVAVPSLGNNFVGLLKESSLSFALGVAEIL 175 Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 + + Q+ + +E L +Y ++I+I+ +L K+ Sbjct: 176 AQAKMLAAQSYRYMESYLAVAIVYWIITIVISWGQKKLEKKL 217 >gi|163736869|ref|ZP_02144287.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Phaeobacter gallaeciensis BS107] gi|161389473|gb|EDQ13824.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Phaeobacter gallaeciensis BS107] Length = 273 Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 46/128 (35%), Positives = 78/128 (60%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IAL +AFI+E+ R+GL +V GQ+EAA +LGL+ R ++ PQA+R+I+PPL + Sbjct: 145 IALMIAYSAFISEVFRAGLQSVDEGQIEAAKSLGLSRWHRFRFIVFPQAIRTILPPLGND 204 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++ L+K+SSL +G AD+ +G + E + IYL+L+I ++L + R Sbjct: 205 FVALVKDSSLVSVLGVADVTQLGKLTAVGNFRYFETYNVVALIYLTLTIGLSLLLRRFEK 264 Query: 391 KIALKEKK 398 + +E++ Sbjct: 265 HLRRREER 272 >gi|51243940|ref|YP_063824.1| glutamine transport system permease protein (GlnP) [Desulfotalea psychrophila LSv54] gi|50874977|emb|CAG34817.1| related to glutamine transport system permease protein (GlnP) [Desulfotalea psychrophila LSv54] Length = 269 Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 43/127 (33%), Positives = 81/127 (63%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 F S +ALS + A+ +EI R+G++++ RGQ EAA + GL++ + R ++LPQA++ I+ Sbjct: 139 RFSSAILALSLFEGAYTSEIFRTGILSIDRGQHEAAASFGLSNIQRYRFIILPQAIKKIL 198 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 PPLT+Q ++L+K+S+L + DL ++ +T + EI IYL ++I++++ Sbjct: 199 PPLTNQAISLVKDSALVSTIAIYDLTMQAQMLVAETYLSFEIWFTVALIYLCINILLSIA 258 Query: 385 MNRLNAK 391 + ++ K Sbjct: 259 VFLMDKK 265 >gi|257451921|ref|ZP_05617220.1| amino acid ABC transporter permease [Fusobacterium sp. 3_1_5R] gi|317058472|ref|ZP_07922957.1| amino acid ABC transporter permease [Fusobacterium sp. 3_1_5R] gi|313684148|gb|EFS20983.1| amino acid ABC transporter permease [Fusobacterium sp. 3_1_5R] Length = 224 Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 45/147 (30%), Positives = 85/147 (57%) Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309 +L F+G +P + IA + A++AEI+R+G+ + +GQ EA ALGL++ + Sbjct: 78 ILANIIFVGALRETPILIVAGIAFGMNSGAYVAEIIRAGIEGLEKGQTEAGRALGLSYAQ 137 Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369 + V++PQA++ I+P L S+++ LLK +S+ +G DL+ I +QT + +E +L Sbjct: 138 TMKFVIIPQAVKKILPALVSEFITLLKETSIVGFIGGVDLLRSANIITSQTYRGVEPLLA 197 Query: 370 WMFIYLSLSIMIALFMNRLNAKIALKE 396 IYL L+ + + M ++ + + + Sbjct: 198 VGIIYLILTTVFTILMRKVEKGLKVSD 224 >gi|268589605|ref|ZP_06123826.1| polar amino amino acid ABC transporter, PAAT family, permease protein [Providencia rettgeri DSM 1131] gi|291315079|gb|EFE55532.1| polar amino amino acid ABC transporter, PAAT family, permease protein [Providencia rettgeri DSM 1131] Length = 254 Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 46/131 (35%), Positives = 78/131 (59%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+S IA++ + A+++EI R+G+ ++ +GQMEA+ ALG++ K R V+LPQA R I+P Sbjct: 122 FLSCVIAITLNSGAYVSEIFRAGIQSIDKGQMEASRALGMSWAKTMRKVILPQAFRRILP 181 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PL + + ++K+SSLA A+G ADL T+ E L IY L+ ++A + Sbjct: 182 PLGNNAIAIVKDSSLASAIGLADLAYAARTVSGAYATYWEPYLTISVIYWMLTFILAQLV 241 Query: 386 NRLNAKIALKE 396 + ++ + Sbjct: 242 QYMERRLGRSD 252 >gi|194444936|ref|YP_002039906.1| glutamate/aspartate ABC transporter permease protein GltK [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194403599|gb|ACF63821.1| glutamate/aspartate ABC transporter, permease protein GltK [Salmonella enterica subsp. enterica serovar Newport str. SL254] Length = 224 Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 43/127 (33%), Positives = 78/127 (61%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 +S +A S + AA+ +EI+R+G+ ++ RGQ AA+ALG+TH ++ +L++LPQA R+++ Sbjct: 96 RLISAMVAFSMFEAAYYSEIIRAGIQSISRGQSSAALALGMTHWQSMKLIILPQAFRAMV 155 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 P L +Q + L +++SL + AD TI + G +E+IL +Y S+ +L Sbjct: 156 PLLLTQGIVLFQDTSLVYVLSLADFFRTASTIGERDGTQVEMILFAGAVYFVFSLSASLL 215 Query: 385 MNRLNAK 391 ++ L + Sbjct: 216 VSYLKKR 222 Score = 42.4 bits (98), Expect = 0.13, Method: Compositional matrix adjust. Identities = 28/92 (30%), Positives = 49/92 (53%), Gaps = 10/92 (10%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G V T + + ++ + GT++ RLS+ +AW + YV VFR+IP ++V+ + Sbjct: 16 LLAGLVITLKITVTAVVVGIVWGTILAVMRLSSFAPIAWFAKAYVNVFRSIPLVMVLLWF 75 Query: 149 Y-------KSVLSVLPIPD---HSIVLPFGMF 170 Y ++VL + P D S ++ F MF Sbjct: 76 YLIVPGFLQNVLGLSPKTDIRLISAMVAFSMF 107 >gi|89899833|ref|YP_522304.1| amino acid ABC transporter permease [Rhodoferax ferrireducens T118] gi|89344570|gb|ABD68773.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Rhodoferax ferrireducens T118] Length = 214 Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 65/204 (31%), Positives = 102/204 (50%), Gaps = 20/204 (9%) Query: 195 VLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQF 254 +LG ++LF R + L ++YI T I G+P LVL+ + Y F Sbjct: 30 ILGFCIALF-----RVSPNSVLRYLSVVYIQT--IQGIPLLVLLFIAY-----------F 71 Query: 255 NF-IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313 F I G SP F+++ +A S Y+AA++ EI R + VP+ Q EA+ +LG + RL Sbjct: 72 GFSIAGFNPSP-FVTVVVAFSLYSAAYLGEIWRGCIQTVPKPQWEASGSLGFNRYQQLRL 130 Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI 373 V++PQA R PP + L+KN+SLA VGF +L G + N T + + L+ Sbjct: 131 VIIPQAFRIATPPTVGFLVQLVKNTSLASTVGFIELARAGQILNNTTFKPFSVFLLVALF 190 Query: 374 YLSLSIMIALFMNRLNAKIALKEK 397 Y L ++L +L + + + Sbjct: 191 YFGLCFPLSLLSKKLERSLNVAHR 214 >gi|318604769|emb|CBY26267.1| glutamate Aspartate transport system permease protein GltK [Yersinia enterocolitica subsp. palearctica Y11] Length = 224 Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 43/127 (33%), Positives = 77/127 (60%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 +S +A S + AA+ +EI+R+G+ ++ RGQ AA+ALG+T ++ RLV+LPQA R+++ Sbjct: 96 RLISAMVAFSLFEAAYYSEIIRAGIQSISRGQSSAALALGMTQGQSMRLVILPQAFRAMV 155 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 P L +Q + L +++SL + AD TI + G +E++L +Y +S ++ Sbjct: 156 PLLLTQGIVLFQDTSLVYVLSLADFFRTATTIGERDGTQVEMVLFAGLVYFVISFSASML 215 Query: 385 MNRLNAK 391 +N L + Sbjct: 216 INYLKKR 222 Score = 38.5 bits (88), Expect = 2.1, Method: Compositional matrix adjust. Identities = 19/46 (41%), Positives = 29/46 (63%) Query: 111 GTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVL 156 GT++ RLS K ++W YV VFR+IP ++V+ + Y V S+L Sbjct: 38 GTVLAVMRLSPVKAISWFATAYVNVFRSIPLVMVLLWFYLVVPSLL 83 >gi|309378707|emb|CBX22657.1| unnamed protein product [Neisseria lactamica Y92-1009] Length = 248 Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 47/121 (38%), Positives = 74/121 (61%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +AL + A+I EI R+G+ ++ +GQMEAA +LGLT+ +A R V+LPQA+R ++PPL S+ Sbjct: 122 LALIANSGAYICEIFRAGIQSIDKGQMEAARSLGLTYPQAMRYVILPQALRRMLPPLASE 181 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++ LLK+SSL + A+L V TI + E + IYL ++ + RL Sbjct: 182 FITLLKDSSLLSVIAVAELAYVQNTITGRYSVYEEPLYTVALIYLLMTTFLGWIFLRLEK 241 Query: 391 K 391 + Sbjct: 242 R 242 >gi|311232935|gb|ADP85789.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio vulgaris RCH1] Length = 314 Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 44/126 (34%), Positives = 76/126 (60%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+S + L+ Y A+I+EIVR+G+ +VPRGQ +A+ + GL + R V+LPQA+R +P Sbjct: 184 FLSAVVTLAIYEGAYISEIVRAGIESVPRGQWDASSSFGLGPVQQMRHVILPQALRHAVP 243 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PL Q+++++K+S++ + +L G ++ T Q EI +YL L++ +L Sbjct: 244 PLAGQFISIIKDSAIVSVISVPELTFQGMELMAATYQTFEIWTTIALLYLVLTLGCSLVA 303 Query: 386 NRLNAK 391 RL + Sbjct: 304 ERLERR 309 >gi|163743971|ref|ZP_02151340.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Phaeobacter gallaeciensis 2.10] gi|161382731|gb|EDQ07131.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Phaeobacter gallaeciensis 2.10] Length = 273 Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 46/128 (35%), Positives = 78/128 (60%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IAL +AFI+E+ R+GL +V GQ+EAA +LGL+ R ++ PQA+R+I+PPL + Sbjct: 145 IALMIAYSAFISEVFRAGLQSVDEGQIEAAKSLGLSRWHRFRFIVFPQAIRTILPPLGND 204 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++ L+K+SSL +G AD+ +G + E + IYL+L+I ++L + R Sbjct: 205 FVALVKDSSLVSVLGVADVTQLGKLTAVGNFRYFETYNVVALIYLTLTIGLSLLLRRFEK 264 Query: 391 KIALKEKK 398 + +E++ Sbjct: 265 HLRRREER 272 >gi|94309637|ref|YP_582847.1| amino acid ABC transporter permease [Cupriavidus metallidurans CH34] gi|93353489|gb|ABF07578.1| ABC-type transporter, permease component: PAAT family [Cupriavidus metallidurans CH34] Length = 230 Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 49/138 (35%), Positives = 85/138 (61%), Gaps = 5/138 (3%) Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322 +P+F ++ +AL + A++AEIVR+G+ +PRGQME+A +LGL++ +A LV+LPQA+R+ Sbjct: 92 TPQFATMLVALVVFDGAYLAEIVRAGIQGLPRGQMESARSLGLSYAQAMALVILPQALRN 151 Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT-GQAIEIILIWMFIY----LSL 377 ++P L +Q ++ +K +SL + ++ + G I Q QA ++ L+ Y L Sbjct: 152 MLPSLVNQLVSTIKETSLGYIISLPEVSFIAGQISTQMLTQAAQVYLLLALSYFVMCFGL 211 Query: 378 SIMIALFMNRLNAKIALK 395 + L RL A+ A+K Sbjct: 212 TRCAYLLERRLAARNAVK 229 Score = 36.6 bits (83), Expect = 7.5, Method: Compositional matrix adjust. Identities = 22/67 (32%), Positives = 34/67 (50%) Query: 83 SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142 Y L G T LA SG++ A +G ++G R+S + + W V + V R P L Sbjct: 15 GQYPNGPLGGLALTVLLAASGLVLALPVGIVLGLCRVSPFRTLRWPATVLIYVVRGTPLL 74 Query: 143 VVIFFLY 149 +V+F+ Y Sbjct: 75 MVVFWAY 81 >gi|254975774|ref|ZP_05272246.1| amino-acid ABC transporter, permease protein [Clostridium difficile QCD-66c26] gi|255093161|ref|ZP_05322639.1| amino-acid ABC transporter, permease protein [Clostridium difficile CIP 107932] gi|255314903|ref|ZP_05356486.1| amino-acid ABC transporter, permease protein [Clostridium difficile QCD-76w55] gi|255517577|ref|ZP_05385253.1| amino-acid ABC transporter, permease protein [Clostridium difficile QCD-97b34] gi|255650688|ref|ZP_05397590.1| amino-acid ABC transporter, permease protein [Clostridium difficile QCD-37x79] gi|260683775|ref|YP_003215060.1| putative amino-acid ABC transporter permease [Clostridium difficile CD196] gi|260687435|ref|YP_003218569.1| putative amino-acid ABC transporter permease [Clostridium difficile R20291] gi|306520613|ref|ZP_07406960.1| putative amino-acid ABC transporter, permease protein [Clostridium difficile QCD-32g58] gi|260209938|emb|CBA63911.1| probable amino-acid ABC transporter, permease protein [Clostridium difficile CD196] gi|260213452|emb|CBE05129.1| probable amino-acid ABC transporter, permease protein [Clostridium difficile R20291] Length = 222 Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 60/204 (29%), Positives = 113/204 (55%), Gaps = 15/204 (7%) Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249 F S +LG++L+ F S+ T +Y+S F G P L+ I + +F P Sbjct: 31 FFLSILLGVILAFFTQTKSKVLQYITR-----VYVSFFR--GTPLLIQI---FFFYFGFP 80 Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309 ++ F+F+ SP ++++ I L ++A++ EI+R+ + +V +GQ EA A GL+ + Sbjct: 81 MI--FSFM--KDCSP-YLAIVICLGVNSSAYMTEIIRASIESVDKGQQEACYAFGLSKYQ 135 Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369 + ++LPQA S +PP+ S L+++K SSL + +G DL+ V + + EI +I Sbjct: 136 SMVKIILPQAATSAVPPIVSCTLDIIKGSSLGLTIGIQDLMGVAQVEAASSFKYFEIYMI 195 Query: 370 WMFIYLSLSIMIALFMNRLNAKIA 393 + IY ++SI+++ +++ +I Sbjct: 196 TILIYWAVSIILSNIQSKVEKRIG 219 >gi|317153798|ref|YP_004121846.1| polar amino acid ABC transporter inner membrane subunit [Desulfovibrio aespoeensis Aspo-2] gi|316944049|gb|ADU63100.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio aespoeensis Aspo-2] Length = 238 Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 47/138 (34%), Positives = 80/138 (57%), Gaps = 5/138 (3%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P F + +T A+I EIVR+G++A+P GQMEAA GL+ +A R V+LPQA+R++ Sbjct: 101 PAFSTTLACFIIFTGAYIGEIVRAGVLALPNGQMEAARGSGLSRYQAMRYVILPQALRNM 160 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI---YLSLSIM 380 IP +Q+++L K++SLA +G +L G + N+ + I IW+ I Y + + Sbjct: 161 IPSFVNQFVSLTKDTSLASVIGVNELTRTGVQVDNR--EMIASFEIWITIAALYFCICYV 218 Query: 381 IALFMNRLNAKIALKEKK 398 + R+ A ++ + + Sbjct: 219 LTSISRRMEAHLSRYQAR 236 >gi|157146736|ref|YP_001454055.1| hypothetical protein CKO_02510 [Citrobacter koseri ATCC BAA-895] gi|157083941|gb|ABV13619.1| hypothetical protein CKO_02510 [Citrobacter koseri ATCC BAA-895] Length = 224 Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 45/134 (33%), Positives = 83/134 (61%), Gaps = 4/134 (2%) Query: 262 VSPE----FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317 +SP+ +S +A S + AA+ +EI+R+G+ ++ RGQ AA+ALG+TH ++ +L++LP Sbjct: 89 ISPKTDIRLISAMVAFSMFEAAYYSEIIRAGIQSISRGQSSAALALGMTHWQSMKLIILP 148 Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377 QA R+++P L +Q + L +++SL + AD TI + G +E+IL +Y + Sbjct: 149 QAFRAMVPLLLTQGIVLFQDTSLVYVLSLADFFRTATTIGERDGTQVEMILFAGAVYFVI 208 Query: 378 SIMIALFMNRLNAK 391 S+ +L ++ L + Sbjct: 209 SLSASLLVSYLKKR 222 Score = 43.1 bits (100), Expect = 0.068, Method: Compositional matrix adjust. Identities = 29/92 (31%), Positives = 48/92 (52%), Gaps = 10/92 (10%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G V T + + ++ + GT++ RLS+ VAW + YV VFR+IP ++V+ + Sbjct: 16 LLAGLVITLKITVTAVVIGILWGTILAVMRLSSFAPVAWFAKAYVNVFRSIPLVMVLLWF 75 Query: 149 Y-------KSVLSVLPIPD---HSIVLPFGMF 170 Y + VL + P D S ++ F MF Sbjct: 76 YLIVPGLLQDVLGISPKTDIRLISAMVAFSMF 107 >gi|312883097|ref|ZP_07742828.1| ABC transporter ATP-binding/permease protein [Vibrio caribbenthicus ATCC BAA-2122] gi|309369257|gb|EFP96778.1| ABC transporter ATP-binding/permease protein [Vibrio caribbenthicus ATCC BAA-2122] Length = 264 Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 68/236 (28%), Positives = 119/236 (50%), Gaps = 19/236 (8%) Query: 158 IPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGK 217 +PD G + + T+T+ + +F+ ++G+V +L RLS + G+ Sbjct: 42 VPDFIAFYEDGQWWPAELIDGLTVTIKISMISLLFTLLIGMVTALL--RLS---SSRVGR 96 Query: 218 ALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT 277 + LLY+ LI P LV I L Y + P++G F + +AL+ + Sbjct: 97 GIALLYVE--LIRNTPLLVQIYLLYFVF--GPIIGL----------DRFTTAIVALALFQ 142 Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 A+ AE+ R+GL ++P+GQ EAA +LGL V+LPQ ++ +PPL ++ ++L+KN Sbjct: 143 GAYTAEVFRAGLNSIPKGQYEAAKSLGLNRFFTFYDVILPQVIQRTLPPLANEVVSLVKN 202 Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393 SS+ + DL + I+++T EI IYL L++ ++ + L K+ Sbjct: 203 SSIVSVMAIFDLTTEARNIVSETAMPFEIWFTVAAIYLGLTLTLSAVSSILETKLG 258 >gi|315281521|ref|ZP_07870132.1| glutamine ABC transporter, permease/substrate-binding protein [Listeria marthii FSL S4-120] gi|313614833|gb|EFR88366.1| glutamine ABC transporter, permease/substrate-binding protein [Listeria marthii FSL S4-120] Length = 480 Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 56/176 (31%), Positives = 95/176 (53%), Gaps = 23/176 (13%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 + PL+ + F FG+P AL +++ P F++ IALS Sbjct: 325 RGTPLIVQAFFFYFGIPA----ALDFRM-------------------PVFLAGVIALSLN 361 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 A++ EIVR G+ +V +GQMEAA +LGL ++KA V+LPQA+R +IP +Q++ LK Sbjct: 362 AGAYMVEIVRGGIQSVDKGQMEAARSLGLPYKKAMMKVVLPQAIRMMIPSFINQFVITLK 421 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 ++S+ A+G +L G I+ +T ++ LI +YL + ++ +RL ++ Sbjct: 422 DTSIMSAIGLVELTQSGKIIMARTFESTWTWLIIGIMYLIVITILTKVSDRLERRL 477 Score = 42.7 bits (99), Expect = 0.11, Method: Compositional matrix adjust. Identities = 26/62 (41%), Positives = 35/62 (56%) Query: 88 AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147 A+L G T LA +I A IIG G ++S NK++ I VYV++FR P +V FF Sbjct: 276 ALLAGMWLTIRLAVVSLIIAFIIGITFGFMKVSNNKILRGIATVYVDIFRGTPLIVQAFF 335 Query: 148 LY 149 Y Sbjct: 336 FY 337 >gi|319744752|gb|EFV97094.1| polar amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus agalactiae ATCC 13813] Length = 231 Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 38/88 (43%), Positives = 63/88 (71%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + + + Y A+I+E++RSG+ AVP+GQ EAA+A G T + +L++LPQA+R+I+P Sbjct: 100 FFTAVLCVGLYHGAYISEVIRSGIEAVPKGQTEAALAQGFTANQTMQLIILPQAVRTILP 159 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVG 353 P+T+Q +NL+KN+S + AD++ V Sbjct: 160 PMTNQVVNLIKNTSTVAIISGADIMFVA 187 >gi|52784239|ref|YP_090068.1| YckJ [Bacillus licheniformis ATCC 14580] gi|163119223|ref|YP_077658.2| ABC transporter permease YckJ [Bacillus licheniformis ATCC 14580] gi|319648833|ref|ZP_08003044.1| YckJ protein [Bacillus sp. BT1B_CT2] gi|52346741|gb|AAU39375.1| YckJ [Bacillus licheniformis ATCC 14580] gi|145902729|gb|AAU22020.2| ABC transporter permease protein YckJ [Bacillus licheniformis ATCC 14580] gi|317389252|gb|EFV70068.1| YckJ protein [Bacillus sp. BT1B_CT2] Length = 234 Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 65/205 (31%), Positives = 116/205 (56%), Gaps = 19/205 (9%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 + SF+ G++++L T L+R + +A+ +Y+S I G P LV + + + L V Sbjct: 40 ILSFIFGMIIALI-TALARMSKSRILRAVFGIYVSA--IRGTPLLVQLFIIFYLFPAFQV 96 Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 T+ P F S IA S A+ +EI+R+ +++VP+GQ EAA ++G+T + A Sbjct: 97 ----------TIDP-FPSAIIAFSLNVGAYASEIIRASILSVPKGQWEAAYSIGMTQKTA 145 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370 V+LPQA+R IPPL++ +++L+K++SLA + A+L I G +I++I+ Sbjct: 146 LTRVILPQAVRVSIPPLSNTFISLVKDTSLASQILVAELFRKAQEI--GAGNLDQILIIY 203 Query: 371 M---FIYLSLSIMIALFMNRLNAKI 392 M FIY + ++AL ++ ++ Sbjct: 204 MEAAFIYWIICFVLALVQQQIERRL 228 >gi|323489528|ref|ZP_08094755.1| putative ABC transporter (permease) [Planococcus donghaensis MPA1U2] gi|323396659|gb|EGA89478.1| putative ABC transporter (permease) [Planococcus donghaensis MPA1U2] Length = 225 Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 64/206 (31%), Positives = 115/206 (55%), Gaps = 16/206 (7%) Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248 I V S ++G+++ F + L+R K + LYIS + G+P LV++ L L+F Sbjct: 32 ISVVSMIVGVIIGFFLS-LARTSQLKILQFPARLYIS--FMRGVPILVILFL---LYFAL 85 Query: 249 PVLG-QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307 PV+G +F + + I S +AA+IAE+ RS L +V +GQ E++ ALGLT+ Sbjct: 86 PVVGIEFTAVQAAL---------IGFSINSAAYIAEVFRSSLASVDKGQWESSKALGLTY 136 Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367 ++ R ++LPQ++R +PPL++ YL+L+K SSLA + ++ + + + ++ Sbjct: 137 WQSMRRIILPQSIRIALPPLSNVYLDLIKASSLAAMITVPEIFQKARIVGAREYDLLTML 196 Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIA 393 ++ IY ++ ++ + N L K A Sbjct: 197 ILVALIYWAICSIMTILQNYLEKKYA 222 >gi|257467277|ref|ZP_05631588.1| amino acid ABC transporter permease [Fusobacterium gonidiaformans ATCC 25563] gi|315918406|ref|ZP_07914646.1| amino acid transport system permease [Fusobacterium gonidiaformans ATCC 25563] gi|313692281|gb|EFS29116.1| amino acid transport system permease [Fusobacterium gonidiaformans ATCC 25563] Length = 224 Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 45/147 (30%), Positives = 85/147 (57%) Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309 +L F+G +P + IA + A++AEI+R+G+ + +GQ EA ALGL++ + Sbjct: 78 ILANIIFVGALRETPILIVAGIAFGMNSGAYVAEIIRAGIEGLEKGQTEAGRALGLSYAQ 137 Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369 + V++PQA++ I+P L S+++ LLK +S+ +G DL+ I +QT + +E +L Sbjct: 138 TMKFVIIPQAVKKILPALVSEFITLLKETSIVGFIGGVDLLRSANIITSQTYRGVEPLLA 197 Query: 370 WMFIYLSLSIMIALFMNRLNAKIALKE 396 IYL L+ + + M ++ + + + Sbjct: 198 VGIIYLILTTIFTVLMRKVEKGLKVSD 224 >gi|148379978|ref|YP_001254519.1| amino acid ABC transporter permease [Clostridium botulinum A str. ATCC 3502] gi|153933019|ref|YP_001384277.1| His/Glu/Gln/Arg/opine ABC transporter permease [Clostridium botulinum A str. ATCC 19397] gi|153941251|ref|YP_001391341.1| His/Glu/Gln/Arg/opine ABC transporter permease [Clostridium botulinum F str. Langeland] gi|168179724|ref|ZP_02614388.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Clostridium botulinum NCTC 2916] gi|148289462|emb|CAL83559.1| probable amino acid ABC transporter, permease protein [Clostridium botulinum A str. ATCC 3502] gi|152929063|gb|ABS34563.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Clostridium botulinum A str. ATCC 19397] gi|152937147|gb|ABS42645.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Clostridium botulinum F str. Langeland] gi|182669187|gb|EDT81163.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Clostridium botulinum NCTC 2916] gi|295319370|gb|ADF99747.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Clostridium botulinum F str. 230613] Length = 228 Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 52/182 (28%), Positives = 103/182 (56%), Gaps = 14/182 (7%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 + P+L + +GLPT I +K+ + P+LG NF P+F + +ALS Sbjct: 61 RGTPVLVQLYIIYYGLPT---IGIKFP---EVPILGS-NF-------PDFFAGILALSIN 106 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 + A++AEI+R+G+ AV +GQMEAA +LG++ A + V++PQA ++I+P L ++++ ++K Sbjct: 107 SGAYVAEIIRAGIQAVDKGQMEAARSLGMSESMAMKNVIIPQAFKNILPALGNEFITIIK 166 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 SS+ +G +L+ T+ + E +L+ +Y L+ ++ + ++ + + Sbjct: 167 ESSIVSIIGIHELMYNADTVRGNIFRPFEPLLVAALMYFILTFTLSKLLGVAERRMRVSD 226 Query: 397 KK 398 + Sbjct: 227 RN 228 >gi|294101423|ref|YP_003553281.1| polar amino acid ABC transporter, inner membrane subunit [Aminobacterium colombiense DSM 12261] gi|293616403|gb|ADE56557.1| polar amino acid ABC transporter, inner membrane subunit [Aminobacterium colombiense DSM 12261] Length = 217 Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 60/162 (37%), Positives = 91/162 (56%), Gaps = 13/162 (8%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 K L YI ++I G P L+ + L Y F P LG N P F + I LS Sbjct: 52 KGLAAAYI--YVIRGTPLLIQLFLIY---FGLPSLG-INL-------PAFTAGIIGLSIN 98 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 +A ++ EIVR G+ AVP+GQ EAA LGL++ R ++LPQA+R+++P L ++++ L+K Sbjct: 99 SAGYVGEIVRGGIEAVPKGQWEAAKVLGLSYLGTMRHIILPQAIRNMLPALGNEFVTLIK 158 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378 SSL + A+L VG + + T + E ++ IYL L+ Sbjct: 159 ESSLLSTLAIAELTMVGQQVRSVTYASFETFIMVGLIYLCLT 200 >gi|261365769|ref|ZP_05978652.1| polar amino amino acid ABC transporter, PAAT family, permease protein [Neisseria mucosa ATCC 25996] gi|288565672|gb|EFC87232.1| polar amino amino acid ABC transporter, PAAT family, permease protein [Neisseria mucosa ATCC 25996] Length = 248 Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 47/121 (38%), Positives = 74/121 (61%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +AL + A+I EI R+G+ ++ RGQMEAA +LGL++ +A R V+LPQA+R ++PPL S+ Sbjct: 122 LALIANSGAYICEIFRAGIQSIDRGQMEAARSLGLSYPQAMRYVILPQALRRMLPPLASE 181 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++ LLK+SSL + A+L V TI + E + IYL ++ + RL Sbjct: 182 FITLLKDSSLLSVIAVAELAYVQSTISGRYSVYEEPLYTVALIYLMMTTFLGWVFLRLEN 241 Query: 391 K 391 + Sbjct: 242 R 242 >gi|123443208|ref|YP_001007182.1| putative glutamate/aspartate transport system permease [Yersinia enterocolitica subsp. enterocolitica 8081] gi|332160866|ref|YP_004297443.1| putative glutamate/aspartate transport system permease [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|122090169|emb|CAL13032.1| putative glutamate/aspartate transport system permease [Yersinia enterocolitica subsp. enterocolitica 8081] gi|325665096|gb|ADZ41740.1| putative glutamate/aspartate transport system permease [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|330863398|emb|CBX73520.1| glutamate/aspartate transport system permease protein gltK [Yersinia enterocolitica W22703] Length = 224 Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 43/127 (33%), Positives = 77/127 (60%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 +S +A S + AA+ +EI+R+G+ ++ RGQ AA+ALG+T ++ RLV+LPQA R+++ Sbjct: 96 RLISAMVAFSLFEAAYYSEIIRAGIQSISRGQSSAALALGMTQGQSMRLVILPQAFRAMV 155 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 P L +Q + L +++SL + AD TI + G +E++L +Y +S ++ Sbjct: 156 PLLLTQGIVLFQDTSLVYVLSLADFFRTATTIGERDGTQVEMVLFAGLVYFVISFSASML 215 Query: 385 MNRLNAK 391 +N L + Sbjct: 216 VNYLKKR 222 Score = 38.5 bits (88), Expect = 2.1, Method: Compositional matrix adjust. Identities = 19/46 (41%), Positives = 29/46 (63%) Query: 111 GTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVL 156 GT++ RLS K ++W YV VFR+IP ++V+ + Y V S+L Sbjct: 38 GTVLAVMRLSPVKAISWFATAYVNVFRSIPLVMVLLWFYLVVPSLL 83 >gi|326804125|ref|YP_004321943.1| ABC transporter, permease protein [Aerococcus urinae ACS-120-V-Col10a] gi|326650324|gb|AEA00507.1| ABC transporter, permease protein [Aerococcus urinae ACS-120-V-Col10a] Length = 505 Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 69/207 (33%), Positives = 107/207 (51%), Gaps = 23/207 (11%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 VF LG +L++ RL+ + K + + Y+ I G P ++ V Sbjct: 318 VFGLTLGAILAVM--RLTEN---KILSGIAMAYVE--FIRGTPLMI------------QV 358 Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 L F IGG P +S IA+S + A+I+EI+R G+ AV + Q EAA +LGL Sbjct: 359 LFMFLGIGGLFNVPALLSALIAVSLNSGAYISEIIRGGIQAVDKEQTEAARSLGLDRLTT 418 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370 + V+ PQ++RSI P L ++++ L+K SS+ +G A+L + + T Q I +LI Sbjct: 419 LKKVIFPQSLRSIWPALGNEFVTLIKESSIVSTIGIAELTFQTRAVTSITYQGIIPLLIS 478 Query: 371 MFIYLSLSIMIALFMNR----LNAKIA 393 M IY L+ + F+NR +NAK A Sbjct: 479 MVIYFILTFTLTKFLNRWEKQMNAKYA 505 >gi|310640366|ref|YP_003945124.1| glutamine transport system permease protein [Paenibacillus polymyxa SC2] gi|309245316|gb|ADO54883.1| Probable glutamine transport system permease protein [Paenibacillus polymyxa SC2] Length = 482 Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 59/200 (29%), Positives = 104/200 (52%), Gaps = 17/200 (8%) Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252 +F+LG+V H K + + +++ F G+P LI L + ++F P Sbjct: 297 AFLLGLVFGFMKVS-----HNKVFRGIATVFVDVFR--GIP---LIVLAFFIYFGIPQAL 346 Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312 F P F++ + LS A++ EI+R G+ ++ GQMEAA +LGL +R A Sbjct: 347 DFKM-------PLFVAAVLTLSLNAGAYVTEIIRGGIQSIDPGQMEAARSLGLPYRTAML 399 Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372 ++LPQA++ +IP +Q + LK++S+ +G +L G II +T Q+ +I L+ Sbjct: 400 KIILPQAVKIMIPSFINQLVITLKDTSILSVIGLVELTQSGKIIIARTFQSFDIWLVVAV 459 Query: 373 IYLSLSIMIALFMNRLNAKI 392 +YL + ++ NRL ++ Sbjct: 460 MYLIVITVLTKISNRLEGRV 479 Score = 42.4 bits (98), Expect = 0.14, Method: Compositional matrix adjust. Identities = 47/173 (27%), Positives = 76/173 (43%), Gaps = 24/173 (13%) Query: 71 EIDQGIVPYTSD-----SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLV 125 E +G+ P S+ A++ G NT ++ A ++G + G ++S NK+ Sbjct: 256 ESGKGVAPVERSRWELISASLPALIKGMGNTLLYTLVSLLVAFLLGLVFGFMKVSHNKVF 315 Query: 126 AWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDT 185 I V+V+VFR IP +V+ FF+Y IP L F M L LT+ Sbjct: 316 RGIATVFVDVFRGIPLIVLAFFIY------FGIPQ---ALDFKMPL----FVAAVLTLSL 362 Query: 186 NAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLI 238 NA +V + G + S+ ++ + ++L L Y + L LP V I Sbjct: 363 NAGAYVTEIIRGGIQSIDPGQM------EAARSLGLPYRTAMLKIILPQAVKI 409 >gi|77405945|ref|ZP_00783025.1| amino acid ABC transporter, permease protein [Streptococcus agalactiae H36B] gi|77175456|gb|EAO78245.1| amino acid ABC transporter, permease protein [Streptococcus agalactiae H36B] Length = 133 Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 40/85 (47%), Positives = 63/85 (74%), Gaps = 3/85 (3%) Query: 272 ALSC---YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328 A+SC Y A+I+E++RSG+ AVP+GQ EAA+A G T + +L++LPQA+R+I+PP+T Sbjct: 5 AVSCVGLYHGAYISEVIRSGIEAVPKGQTEAALAQGFTANQTMQLIILPQAVRTILPPMT 64 Query: 329 SQYLNLLKNSSLAVAVGFADLVSVG 353 +Q +NL+KN+S + AD++ V Sbjct: 65 NQVVNLIKNTSTVAIISGADIMFVA 89 >gi|307730960|ref|YP_003908184.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia sp. CCGE1003] gi|307585495|gb|ADN58893.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. CCGE1003] Length = 225 Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 44/126 (34%), Positives = 77/126 (61%) Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327 S +A S + AA+ +EI+R+G+ AVPRGQ+ AA ALG+ + +A RL++LPQA R+++P L Sbjct: 99 SAMVAFSLFEAAYYSEIIRAGIQAVPRGQVNAAYALGMGYGQAMRLIVLPQAFRAMVPLL 158 Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387 +Q + L +++SL + AD I ++ G +E++L Y + ++ + + Sbjct: 159 LTQGIVLFQDTSLVYVISLADFFRTATNIGDRDGTNVEMVLFAGACYFVICVIASSLVKG 218 Query: 388 LNAKIA 393 L K+A Sbjct: 219 LQKKVA 224 >gi|241113706|ref|YP_002973541.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240861914|gb|ACS59580.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 276 Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 64/214 (29%), Positives = 110/214 (51%), Gaps = 10/214 (4%) Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240 LT++ A VF VLG +L+L AT K + ++ F G+P +V I Sbjct: 49 LTLELTAGAMVFGIVLGCLLALMATS-----QNPVLKVIAAGFVWWFR--GVPLIVQIFF 101 Query: 241 KYQLHFDKPV--LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQME 298 + + P +G F V+P ++AL + AA ++EI+R GL+AV RGQ E Sbjct: 102 WFNIALFIPQVGMGSFTISINDLVTPALAG-FLALGLHEAANMSEIIRGGLVAVDRGQRE 160 Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN 358 AA ALGL + V++PQA R I+PP +Q + +LK +++ +G DL++ I Sbjct: 161 AATALGLKKTQTFLTVIMPQATRIIVPPTGNQAIGMLKATAIVSVIGMQDLLTQAQAIYA 220 Query: 359 QTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 + IE++ + YL+++ + ++ + L ++ Sbjct: 221 RNFLVIELLFVASIWYLAITSVASIGQHYLEKRL 254 >gi|213970377|ref|ZP_03398506.1| glutamine/glutamate ABC transporter, permease protein [Pseudomonas syringae pv. tomato T1] gi|301381160|ref|ZP_07229578.1| glutamine/glutamate ABC transporter, permease protein [Pseudomonas syringae pv. tomato Max13] gi|302063126|ref|ZP_07254667.1| glutamine/glutamate ABC transporter, permease protein [Pseudomonas syringae pv. tomato K40] gi|302132573|ref|ZP_07258563.1| glutamine/glutamate ABC transporter, permease protein [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213924848|gb|EEB58414.1| glutamine/glutamate ABC transporter, permease protein [Pseudomonas syringae pv. tomato T1] Length = 219 Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 47/112 (41%), Positives = 70/112 (62%), Gaps = 3/112 (2%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P F + LS + A+ + E+VR GL ++PRGQ EA +A+GL + VLLPQA++ + Sbjct: 88 PAFWCAVLVLSLWGASEVGEVVRGGLRSIPRGQREAGLAIGLGLGQLYGRVLLPQALKRL 147 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375 PP+ + Y L+K SSLAV +G D+ VG II +T E +LI+ F++L Sbjct: 148 TPPVINVYTRLIKTSSLAVLIGVIDITKVGQQIIERT---YESVLIYGFLFL 196 >gi|28870259|ref|NP_792878.1| glutamine/glutamate ABC transporter permease [Pseudomonas syringae pv. tomato str. DC3000] gi|28853506|gb|AAO56573.1| glutamine/glutamate ABC transporter, permease protein [Pseudomonas syringae pv. tomato str. DC3000] Length = 219 Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 47/112 (41%), Positives = 70/112 (62%), Gaps = 3/112 (2%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P F + LS + A+ + E+VR GL ++PRGQ EA +A+GL + VLLPQA++ + Sbjct: 88 PAFWCAVLVLSLWGASEVGEVVRGGLRSIPRGQREAGLAIGLGLGQLYGRVLLPQALKRL 147 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375 PP+ + Y L+K SSLAV +G D+ VG II +T E +LI+ F++L Sbjct: 148 TPPVINVYTRLIKTSSLAVLIGVIDITKVGQQIIERT---YESVLIYGFLFL 196 >gi|330973077|gb|EGH73143.1| amino acid ABC transporter permease [Pseudomonas syringae pv. aceris str. M302273PT] Length = 254 Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 49/129 (37%), Positives = 77/129 (59%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+S+ + L +TAA + E VR+G+ A+P+GQ AA A+G + VLLPQA R IIP Sbjct: 31 FLSVVVCLGLFTAARVCEQVRTGIEALPKGQESAARAMGFKLPQIYWNVLLPQAYRIIIP 90 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PLTS++LN+ KNSS+A +G +L++ + E + IY +L++ + L M Sbjct: 91 PLTSEFLNVFKNSSVASLIGLMELLAQTKQTAEFSANLFEAFTLATLIYFTLNMSLMLLM 150 Query: 386 NRLNAKIAL 394 + K+A+ Sbjct: 151 RVIEKKVAV 159 >gi|302336895|ref|YP_003802101.1| polar amino acid ABC transporter inner membrane protein [Spirochaeta smaragdinae DSM 11293] gi|301634080|gb|ADK79507.1| polar amino acid ABC transporter, inner membrane subunit [Spirochaeta smaragdinae DSM 11293] Length = 225 Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 67/205 (32%), Positives = 112/205 (54%), Gaps = 33/205 (16%) Query: 195 VLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY-----QLHFDKP 249 +LG +L+L RLS++ K + LY+ +I G P LV + + Y L DK Sbjct: 43 ILGTLLALM--RLSKN---KVANIISKLYVE--IIRGTPVLVQLLIIYFVIFRALDVDKT 95 Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309 M+ +A + A++AEI+R+G+ AV +GQMEAA +LGL HR Sbjct: 96 -----------------MASSLAFGINSGAYVAEIIRAGIQAVDKGQMEAARSLGLPHRL 138 Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI----E 365 A + ++LPQA+++I+P L ++++ LLK +S+ +G DL+ G I + T +A Sbjct: 139 AMKEIILPQAIKNILPALGNEFIVLLKETSIIGFIGGNDLMRAGNKIRSITYEATVPLFA 198 Query: 366 IILIWMFIYLSLSIMIALFMNRLNA 390 +I++ I LSLS ++ + RL++ Sbjct: 199 TAVIYLIITLSLSHLLNRYERRLHS 223 Score = 38.1 bits (87), Expect = 2.3, Method: Compositional matrix adjust. Identities = 21/61 (34%), Positives = 32/61 (52%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G T + + I+GTL+ RLS NK+ I ++YVE+ R P LV + + Sbjct: 23 LLNGLKVTIVVTLFAITAGVILGTLLALMRLSKNKVANIISKLYVEIIRGTPVLVQLLII 82 Query: 149 Y 149 Y Sbjct: 83 Y 83 >gi|227114069|ref|ZP_03827725.1| amino acid ABC transporter [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 254 Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 41/133 (30%), Positives = 79/133 (59%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+S +A++ A+++EI R+G+ ++ RGQMEA+ +LG+++ + R V+LPQA R ++P Sbjct: 122 FLSCIVAITLNAGAYVSEIFRAGIQSIDRGQMEASRSLGMSYGRTMRKVILPQAFRRMLP 181 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PL + + ++K+SSLA A+G ADL T+ E L +Y ++ +++L + Sbjct: 182 PLGNNAIAIVKDSSLASAIGLADLAYAARTVSGAYATYWEPYLTISIVYWVITFLLSLLV 241 Query: 386 NRLNAKIALKEKK 398 + + + + Sbjct: 242 RHMETRFGKSDSR 254 >gi|77413498|ref|ZP_00789688.1| amino acid ABC transporter, permease protein [Streptococcus agalactiae 515] gi|77160442|gb|EAO71563.1| amino acid ABC transporter, permease protein [Streptococcus agalactiae 515] Length = 207 Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 43/114 (37%), Positives = 72/114 (63%), Gaps = 8/114 (7%) Query: 247 DKPVLGQFNFI--------GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQME 298 + P+L Q F+ G + F + + + Y A+I+E++RSG+ AVP+GQ E Sbjct: 49 NTPLLVQMVFVYYGLAIISNGHVMISAFFTAVLCVGLYHGAYISEVIRSGIEAVPKGQTE 108 Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352 AA+A G T + +L++LPQA+R+I+PP+T+Q +NL+KN+S + AD++ V Sbjct: 109 AALAQGFTANQTMQLIILPQAVRTILPPMTNQVVNLIKNTSTVAIISGADIMFV 162 >gi|325272374|ref|ZP_08138772.1| amino acid ABC transporter permease [Pseudomonas sp. TJI-51] gi|324102499|gb|EGB99947.1| amino acid ABC transporter permease [Pseudomonas sp. TJI-51] Length = 222 Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 67/213 (31%), Positives = 113/213 (53%), Gaps = 30/213 (14%) Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPL-----LYISTFLIFGLPTLVLIALKYQLHF 246 F VLG L+L RLS K LPL +Y+S F G P LV + + ++F Sbjct: 33 FGLVLGFALALM--RLS--------KVLPLNWLARIYVSFFR--GTPLLVQL---FVIYF 77 Query: 247 DKPVLG-QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305 P +G + + I S I LS AA+I EI+R+ + ++ RGQ EAA ++G+ Sbjct: 78 GMPQIGIELDPIPAS---------LIGLSLNMAAYICEILRAAISSIDRGQWEAAASIGM 128 Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365 T +A R +LPQA+R+ +PPL + +++L+K+++LA + +L I +T + Sbjct: 129 TRVQAMRRAILPQALRTALPPLGNSFISLVKDTALAATIQVPELFRQAQLITARTFEVFT 188 Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 + + IY L ++A F NR+ A++ +++ Sbjct: 189 MYVAVAVIYWVLCSILAHFQNRMEARVNQHDQE 221 >gi|322832887|ref|YP_004212914.1| polar amino acid ABC transporter inner membrane subunit [Rahnella sp. Y9602] gi|321168088|gb|ADW73787.1| polar amino acid ABC transporter, inner membrane subunit [Rahnella sp. Y9602] Length = 290 Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 53/167 (31%), Positives = 99/167 (59%), Gaps = 4/167 (2%) Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVL---GQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282 T++ G P ++ + L + L PV+ G F+ ++P F + + LS A+ + Sbjct: 112 TWIFRGTPLILQLLLWFNLALIFPVIAIPGVFSIQTVDIMTP-FTAALLGLSINQGAYTS 170 Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342 E+VR+GLI+V GQ EAA ++G+T A R ++LPQAMR IIPP+ +++++++K +SLA Sbjct: 171 EVVRAGLISVDLGQYEAAKSIGMTRLHALRRIILPQAMRVIIPPIGNEFISMVKTTSLAS 230 Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 + +++++ TI + +E++ + YL + +++L NRL Sbjct: 231 MIQYSEVLYNAQTIYFANARVMELLFVAGIWYLVVVTVLSLGQNRLE 277 >gi|289549953|ref|YP_003470857.1| amino acid ABC transporter, permease protein [Staphylococcus lugdunensis HKU09-01] gi|289179485|gb|ADC86730.1| amino acid ABC transporter, permease protein [Staphylococcus lugdunensis HKU09-01] Length = 239 Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 63/209 (30%), Positives = 120/209 (57%), Gaps = 14/209 (6%) Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248 I + +FVLG++L+LF T L R + +A+ +Y+S +I G P +V + + + + Sbjct: 34 ITIVTFVLGLILALF-TALMRISTSRILRAIARIYVS--IIRGTPMIVQL---FIIFYGI 87 Query: 249 PVLGQFNFIGGS-----TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 P LG+ I G T++P ++ I LS A+ +EI+R G+I++P+GQ EAA ++ Sbjct: 88 PELGRL--ITGDADNQWTLAPVIAAI-IGLSLNVGAYASEIIRGGIISIPKGQTEAAYSI 144 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363 G+T+R+ + ++LPQA+R IP L + +L+L+K++SL + A++ + + T + Sbjct: 145 GMTYRQTVQRIILPQAIRVSIPALGNTFLSLIKDTSLLGFILVAEMFRKAQEVASTTYEY 204 Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392 I ++ +Y + +I++ +KI Sbjct: 205 FTIYILVAIMYWVVCFIISVLQGLYESKI 233 >gi|322806285|emb|CBZ03853.1| amino acid ABC transporter, amino acid-binding/permease protein [Clostridium botulinum H04402 065] Length = 162 Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 51/169 (30%), Positives = 98/169 (57%), Gaps = 14/169 (8%) Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289 +GLPT I +K+ + P+LG NF P+F + +ALS + A++AEI+R+G+ Sbjct: 8 YGLPT---IGIKFP---EVPILGS-NF-------PDFFAGILALSINSGAYVAEIIRAGI 53 Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349 AV +GQMEAA +LG++ A R V++PQA ++I+P L ++++ ++K SS+ +G +L Sbjct: 54 QAVDKGQMEAARSLGMSESMAMRNVIIPQAFKNILPALGNEFITIIKESSIVSIIGIHEL 113 Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 + T+ + E +L+ +Y L+ ++ + ++ + ++ Sbjct: 114 MYNADTVRGNIFRPFEPLLVAALMYFILTFTLSKLLGVAERRMRVSDRN 162 >gi|104779493|ref|YP_605991.1| amino acid ABC transporter permease [Pseudomonas entomophila L48] gi|95108480|emb|CAK13174.1| putative amino acid ABC transporter, permease protein [Pseudomonas entomophila L48] Length = 222 Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 67/213 (31%), Positives = 113/213 (53%), Gaps = 30/213 (14%) Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPL-----LYISTFLIFGLPTLVLIALKYQLHF 246 F VLG L+L RLS K LPL +Y+S F G P LV + + ++F Sbjct: 33 FGLVLGFALALM--RLS--------KILPLDWLARIYVSFFR--GTPLLVQL---FVIYF 77 Query: 247 DKPVLG-QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305 P +G + + I S I LS AA+I EI+R+ + ++ RGQ EAA ++G+ Sbjct: 78 GLPQIGIELDPIPAS---------LIGLSLNMAAYICEILRAAISSIDRGQWEAAASIGM 128 Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365 T +A R +LPQA+R+ +PPL + +++L+K+++LA + +L I +T + Sbjct: 129 TRTQAMRRAILPQALRTALPPLGNSFISLVKDTALAATIQVPELFRQAQLITARTFEVFT 188 Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 + L +Y L ++A F NR+ A++ +++ Sbjct: 189 MYLAVAVVYWILCSILAHFQNRMEARVNQHDQE 221 >gi|331016474|gb|EGH96530.1| glutamine/glutamate ABC transporter, permease protein [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 219 Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 47/112 (41%), Positives = 70/112 (62%), Gaps = 3/112 (2%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P F + LS + A+ + E+VR GL ++PRGQ EA +A+GL + VLLPQA++ + Sbjct: 88 PAFWCAVLVLSLWGASEVGEVVRGGLRSIPRGQREAGLAIGLGLGQLYGRVLLPQALKRL 147 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375 PP+ + Y L+K SSLAV +G D+ VG II +T E +LI+ F++L Sbjct: 148 TPPVINVYTRLIKTSSLAVLIGVIDITKVGQQIIERT---YESVLIYGFLFL 196 >gi|229552146|ref|ZP_04440871.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus rhamnosus LMS2-1] gi|258539560|ref|YP_003174059.1| amino acid ABC transporter permease [Lactobacillus rhamnosus Lc 705] gi|229314448|gb|EEN80421.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus rhamnosus LMS2-1] gi|257151236|emb|CAR90208.1| ABC transporter, amino acid transporter permease protein [Lactobacillus rhamnosus Lc 705] Length = 485 Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 46/130 (35%), Positives = 83/130 (63%), Gaps = 4/130 (3%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P ++ IA+S +AA++AEI+RSG+ ++P GQ EAA +LGL+ R+ V+LPQA+++I Sbjct: 353 PALVAGLIAVSLNSAAYVAEIIRSGIDSIPIGQTEAARSLGLSERQTMTSVVLPQAIKNI 412 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY----LSLSI 379 P L +++++L+K SS+ +G DL+ + T + ++ IL+ M +Y LS Sbjct: 413 WPALGNEFISLIKESSIVSIIGVTDLIYQLTVVQTATYKGVQPILVAMVLYFVLTFGLSK 472 Query: 380 MIALFMNRLN 389 +++ F ++N Sbjct: 473 LLSHFERKMN 482 >gi|261341267|ref|ZP_05969125.1| glutamate/aspartate ABC transporter, permease protein [Enterobacter cancerogenus ATCC 35316] gi|288316571|gb|EFC55509.1| glutamate/aspartate ABC transporter, permease protein [Enterobacter cancerogenus ATCC 35316] Length = 224 Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 42/127 (33%), Positives = 79/127 (62%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 +S +A S + AA+ +EI+R+G+ ++ RGQ AA+ALG+TH ++ +L++LPQA R+++ Sbjct: 96 RLISAMVAFSMFEAAYYSEIIRAGIQSISRGQSSAALALGMTHWQSMKLIILPQAFRAMV 155 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 P L +Q + L +++SL + AD TI + G +E++L +Y +S+ +L Sbjct: 156 PLLLTQGIVLFQDTSLVYVLSLADFFRTASTIGERDGTQVEMVLFAGGVYFVISLSASLL 215 Query: 385 MNRLNAK 391 ++ L + Sbjct: 216 VSWLKKR 222 Score = 40.0 bits (92), Expect = 0.62, Method: Compositional matrix adjust. Identities = 27/78 (34%), Positives = 42/78 (53%), Gaps = 10/78 (12%) Query: 103 GMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY-------KSVLSV 155 +I + GTL+ RLS+ K +AW YV VFR+IP ++V+ + Y ++VL + Sbjct: 30 AIIVGIVWGTLLAVMRLSSFKPLAWFATAYVNVFRSIPLVMVLLWFYLIVPGFLQNVLGL 89 Query: 156 LPIPD---HSIVLPFGMF 170 P D S ++ F MF Sbjct: 90 SPKTDIRLISAMVAFSMF 107 >gi|222094396|ref|YP_002528455.1| ABC transporter , permease; glutamine ABC transporter , permease [Bacillus cereus Q1] gi|229194960|ref|ZP_04321741.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus m1293] gi|221238453|gb|ACM11163.1| ABC transporter, permease; probable glutamine ABC transporter, permease [Bacillus cereus Q1] gi|228588528|gb|EEK46565.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus m1293] Length = 214 Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 68/215 (31%), Positives = 110/215 (51%), Gaps = 45/215 (20%) Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFA 204 I FL K +L L + +IVL F + + + KI VFS +LG+++ + Sbjct: 12 ILFLLKGLLITLEVALVAIVLSF--------IIGSVIGIVRYTKIPVFSQILGVIVEVI- 62 Query: 205 TRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP 264 + LPLL I F F LP LK ++ Sbjct: 63 ------------RNLPLLLIIFFTYFALPEA---GLKLEI-------------------- 87 Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 ++ +AL+ + AA I+EIVRSGL+++ +GQ+EAA + GLT+ +A ++LPQA+R ++ Sbjct: 88 -ITAVIVALTIFEAAMISEIVRSGLLSIEKGQIEAARSSGLTYVQALWHIILPQALRRMV 146 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359 PPL SQ+++LLK+++LAV + +L+ I Q Sbjct: 147 PPLVSQFISLLKDTALAVVISLPELMHNAQIISGQ 181 Score = 38.9 bits (89), Expect = 1.5, Method: Compositional matrix adjust. Identities = 22/61 (36%), Positives = 37/61 (60%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G + T +A ++ + IIG+++G R + + + I V VEV RN+P L++IFF Sbjct: 15 LLKGLLITLEVALVAIVLSFIIGSVIGIVRYTKIPVFSQILGVIVEVIRNLPLLLIIFFT 74 Query: 149 Y 149 Y Sbjct: 75 Y 75 >gi|116516598|ref|YP_816212.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae D39] gi|149021689|ref|ZP_01835720.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP23-BS72] gi|116077174|gb|ABJ54894.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae D39] gi|147930150|gb|EDK81136.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP23-BS72] gi|301793968|emb|CBW36365.1| putative amino acid ABC transporter permease protein [Streptococcus pneumoniae INV104] Length = 227 Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 62/210 (29%), Positives = 117/210 (55%), Gaps = 21/210 (10%) Query: 195 VLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF---GLPTLVLIALKYQL-HFDKPV 250 +LG+VL+ F R K PL++++ ++ G P +V I + + L H + P Sbjct: 33 ILGVVLA-FGQR---------SKFKPLVWLANLYVWIFRGTPMMVQIMIAFALMHINAPT 82 Query: 251 LGQFNFIGG--STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308 + Q +G S + P + +S + A+++EIVR+G+ AVP+GQ+EAA +LG+ + Sbjct: 83 I-QIGILGVDFSRLIPGIL----IISMNSGAYVSEIVRAGINAVPKGQLEAAYSLGIRPK 137 Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368 A R V+LPQA+++I+P L ++++ ++K+SSL A+G +L + T+ T + +L Sbjct: 138 NAMRYVILPQAVKNILPALGNEFITIIKDSSLLSAIGVMELWNGATTVSTTTYLPLTPLL 197 Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 F YL ++ ++ + + + +KK Sbjct: 198 FAAFYYLIMTSILTVALKAFEKHMGQGDKK 227 >gi|116250760|ref|YP_766598.1| transmembrane component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] gi|115255408|emb|CAK06483.1| putative transmembrane component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] Length = 290 Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 66/219 (30%), Positives = 111/219 (50%), Gaps = 10/219 (4%) Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240 LT++ A +F VLG +L+L AT K + ++ F G+P +V I Sbjct: 69 LTLELTAGAMMFGIVLGCLLALMATS-----QNPVLKVIAAGFVWWFR--GVPLIVQIFF 121 Query: 241 KYQLHFDKPV--LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQME 298 + + P +G F V+P ++AL + AA ++EI+R GLIAV RGQ E Sbjct: 122 WFNIALFIPQVGMGSFTISINDLVTPALAG-FLALGLHEAANMSEIIRGGLIAVDRGQRE 180 Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN 358 AA ALGL + V++PQA R I+PP +Q + +LK S++ +G DL++ I Sbjct: 181 AATALGLKKTQTFFTVIMPQATRIIVPPTGNQAIGMLKASAIVSVIGMQDLLTQAQAIYA 240 Query: 359 QTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 + IE++ + YL+++ + ++ + L + K + Sbjct: 241 RNFLVIELLFVASIWYLAITSVASIGQHYLEKSLVPKGR 279 >gi|330501773|ref|YP_004378642.1| polar amino acid ABC transporter inner membrane subunit [Pseudomonas mendocina NK-01] gi|328916059|gb|AEB56890.1| polar amino acid ABC transporter, inner membrane subunit [Pseudomonas mendocina NK-01] Length = 245 Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 48/129 (37%), Positives = 76/129 (58%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + I L CY AA +AE+VR+GL ++ RGQ A +A+GLT + R VLLP A R ++P Sbjct: 108 FYTAVICLGCYHAARMAEVVRAGLESLSRGQRMAGLAMGLTLVQTYRYVLLPMAYRIVVP 167 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 +TS++L+ KN+S+A+A+G +L + + Q E +YL L+++I M Sbjct: 168 AITSEFLSCTKNTSVALAIGLMELTGSARAMQENSFQTFEAFTAATTLYLVLNLIIVFAM 227 Query: 386 NRLNAKIAL 394 + K A+ Sbjct: 228 RAVERKAAV 236 >gi|320325613|gb|EFW81675.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. glycinea str. B076] Length = 248 Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 48/129 (37%), Positives = 76/129 (58%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+S+ + L +TAA + E VR+G+ +P+GQ AA A+G + VLLPQA R IIP Sbjct: 111 FLSVVVCLGLFTAARVCEQVRTGIEVLPKGQESAARAMGFKLPQIYWNVLLPQAYRIIIP 170 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PLTS++LN+ KNSS+A +G +L++ + E + IY +L++ + L M Sbjct: 171 PLTSEFLNVFKNSSVASLIGLMELLAQTKQTAEFSANLFEAFTLATLIYFTLNMSLMLLM 230 Query: 386 NRLNAKIAL 394 + K+A+ Sbjct: 231 RMIEKKVAV 239 Score = 45.1 bits (105), Expect = 0.020, Method: Compositional matrix adjust. Identities = 28/76 (36%), Positives = 42/76 (55%) Query: 82 DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141 +Y + G T +A I A I+G+++G R ++LV+ I VYVE+FRN+P Sbjct: 18 SETYLDWFISGLGWTIAIAVVAWIIALILGSVLGVMRTVPSRLVSGIATVYVEIFRNVPL 77 Query: 142 LVVIFFLYKSVLSVLP 157 LV +F Y V +LP Sbjct: 78 LVQLFIWYFLVPDLLP 93 >gi|306829197|ref|ZP_07462387.1| amino acid ABC superfamily ATP binding cassette transporter, permease protein [Streptococcus mitis ATCC 6249] gi|304428283|gb|EFM31373.1| amino acid ABC superfamily ATP binding cassette transporter, permease protein [Streptococcus mitis ATCC 6249] Length = 227 Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 63/213 (29%), Positives = 117/213 (54%), Gaps = 21/213 (9%) Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF---GLPTLVLIALKYQL-HFD 247 F +LG++L+ FA R + PL++ + ++ G P +V I + + L H D Sbjct: 30 FGTILGVLLA-FAQR---------SRFKPLVWFANVYVWIFRGTPMMVQIMIAFALMHID 79 Query: 248 KPVLGQFNFIGG--STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305 P + Q +G S + P + +S + A+++E VR+G+ AVP+GQ+EAA +LG+ Sbjct: 80 APTI-QVGILGVDLSRLIPGIL----IISMNSGAYVSETVRAGINAVPKGQLEAAYSLGI 134 Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365 + A R V+LPQA+++I+P L ++++ ++K+SSL A+G +L + T+ T + Sbjct: 135 RPKNAMRYVILPQAIKNILPALGNEFITIIKDSSLLSAIGVMELWNGATTVATTTYLPLT 194 Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 +L F YL ++ ++ + + I +KK Sbjct: 195 PLLFAAFYYLIMTSILTVALKAFENYIGQGDKK 227 >gi|66047137|ref|YP_236978.1| amino acid ABC transporter permease [Pseudomonas syringae pv. syringae B728a] gi|71736860|ref|YP_276041.1| amino acid ABC transporter permease [Pseudomonas syringae pv. phaseolicola 1448A] gi|257486607|ref|ZP_05640648.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tabaci ATCC 11528] gi|289624940|ref|ZP_06457894.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289650483|ref|ZP_06481826.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. aesculi str. 2250] gi|289676729|ref|ZP_06497619.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. syringae FF5] gi|298488718|ref|ZP_07006747.1| glutamate/aspartate transport system permease protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|302185659|ref|ZP_07262332.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. syringae 642] gi|63257844|gb|AAY38940.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Pseudomonas syringae pv. syringae B728a] gi|71557413|gb|AAZ36624.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. phaseolicola 1448A] gi|298156791|gb|EFH97882.1| glutamate/aspartate transport system permease protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|320325612|gb|EFW81674.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. glycinea str. B076] gi|320327104|gb|EFW83118.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. glycinea str. race 4] gi|330867230|gb|EGH01939.1| amino acid ABC transporter permease [Pseudomonas syringae pv. aesculi str. 0893_23] gi|330889549|gb|EGH22210.1| amino acid ABC transporter permease [Pseudomonas syringae pv. mori str. 301020] gi|330937578|gb|EGH41517.1| amino acid ABC transporter permease [Pseudomonas syringae pv. pisi str. 1704B] gi|330950014|gb|EGH50274.1| amino acid ABC transporter permease [Pseudomonas syringae Cit 7] gi|330989513|gb|EGH87616.1| amino acid ABC transporter permease [Pseudomonas syringae pv. lachrymans str. M301315] gi|331010090|gb|EGH90146.1| amino acid ABC transporter permease [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 221 Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 61/220 (27%), Positives = 108/220 (49%), Gaps = 23/220 (10%) Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPT 234 +T+ A V VLG +L+L ++ G +++PLL + T+ +P Sbjct: 19 MTLKLMAMGVVGGLVLGTLLALMRLSSNKLLANVAGAYVNYFRSIPLLLVITWFYLAVP- 77 Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294 L++ D P+ F S +A + AA+ EIVR+G+ ++ + Sbjct: 78 ---FVLRWITGEDTPI-------------GAFASCVVAFMMFEAAYFCEIVRAGVQSISK 121 Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354 GQM AA ALG+ + + RL++LPQA R + P L Q + L +++SL VG D ++ Sbjct: 122 GQMGAAQALGMNYSQMMRLIILPQAFRKMTPLLLQQSIILFQDTSLVYTVGLVDFLNASR 181 Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394 + + G+A E ++I +Y ++S +L + RL + A+ Sbjct: 182 SSGDIIGRANEFLIIAGLVYFTISFAASLLVKRLQKRFAV 221 Score = 45.1 bits (105), Expect = 0.019, Method: Compositional matrix adjust. Identities = 28/65 (43%), Positives = 40/65 (61%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151 G V T L G++ ++GTL+ RLS+NKL+A + YV FR+IP L+VI + Y + Sbjct: 16 GMVMTLKLMAMGVVGGLVLGTLLALMRLSSNKLLANVAGAYVNYFRSIPLLLVITWFYLA 75 Query: 152 VLSVL 156 V VL Sbjct: 76 VPFVL 80 >gi|15966713|ref|NP_387066.1| putative amino-acid transport system permease ABC transporter protein [Sinorhizobium meliloti 1021] gi|307300252|ref|ZP_07580032.1| polar amino acid ABC transporter, inner membrane subunit [Sinorhizobium meliloti BL225C] gi|15075985|emb|CAC47539.1| Putative DL-2-aminoadipic acid ABC transporter, permease component [Sinorhizobium meliloti 1021] gi|306904418|gb|EFN35002.1| polar amino acid ABC transporter, inner membrane subunit [Sinorhizobium meliloti BL225C] Length = 323 Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 49/121 (40%), Positives = 75/121 (61%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +ALS A++ EI R+G+ ++PRGQ E A ALGL+ + LV+LPQAMR IIPP +Q Sbjct: 196 LALSLCYGAYMTEIFRAGIESIPRGQTEGATALGLSPSQTMGLVILPQAMRVIIPPTGNQ 255 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++ +LK+SSL VG +L+ + T + IE+++ IY LSI + +R+ A Sbjct: 256 FIAMLKDSSLISVVGVWELMYLARTQGQTEFRHIEMLITASMIYWILSIGLEYMQSRVEA 315 Query: 391 K 391 + Sbjct: 316 R 316 >gi|290957468|ref|YP_003488650.1| binding-protein-dependent transporter [Streptomyces scabiei 87.22] gi|260646994|emb|CBG70093.1| putative binding-protein-dependent transporter [Streptomyces scabiei 87.22] Length = 313 Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 43/117 (36%), Positives = 72/117 (61%), Gaps = 3/117 (2%) Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 AA++AEI R+GL++V GQ EA+ ALG++H + R +++PQAMR I+PP ++ +N+LK Sbjct: 168 AAYMAEICRAGLLSVDEGQTEASHALGMSHARTLRRIVIPQAMRVIVPPTGNEVINMLKT 227 Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILI---WMFIYLSLSIMIALFMNRLNAK 391 +SL V F DL+ I +G +E++ + W + S+ + ++ R AK Sbjct: 228 TSLVSTVQFVDLLKSAQDIGQSSGATVELLFLAAAWYLVLTSIFSVGQYYLERHYAK 284 >gi|77408363|ref|ZP_00785104.1| amino acid ABC transporter, permease protein [Streptococcus agalactiae COH1] gi|77173044|gb|EAO76172.1| amino acid ABC transporter, permease protein [Streptococcus agalactiae COH1] Length = 231 Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 37/85 (43%), Positives = 62/85 (72%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + + + Y A+I+E++RSG+ AVP+GQ EAA+A G T + +L++LPQA+R+I+P Sbjct: 100 FFTAVLCVGLYHGAYISEVIRSGIEAVPKGQTEAALAQGFTANQTMQLIILPQAIRTILP 159 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLV 350 P+T+Q +NL+KN+S + AD++ Sbjct: 160 PMTNQVVNLIKNTSTVAIISGADIM 184 >gi|283833318|ref|ZP_06353059.1| transport and binding protein [Citrobacter youngae ATCC 29220] gi|291070956|gb|EFE09065.1| transport and binding protein [Citrobacter youngae ATCC 29220] Length = 261 Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 51/132 (38%), Positives = 74/132 (56%) Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321 ++PEF+ L +T+AF+ E V SGL AV GQ EAA+A G + R +LLPQ + Sbjct: 109 LTPEFLCSAWGLGVFTSAFLIEEVSSGLQAVSGGQREAAVAQGFSAWAILRHILLPQGLA 168 Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 + P+ QYLNL+K SSLA +GFA+L I + A+E + +YL I++ Sbjct: 169 NAWQPIVGQYLNLMKLSSLASGIGFAELTYQVRQIESYNAHALEAFAVGTALYLLTGIVL 228 Query: 382 ALFMNRLNAKIA 393 + + RL K A Sbjct: 229 DILLTRLGPKPA 240 Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust. Identities = 25/69 (36%), Positives = 41/69 (59%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 I+ GF+ T W+ +G++ AT+ L+ + RL+ N+ + V+V VFRN P LV + F Sbjct: 18 IISGFLTTLWVTLAGVVLATLFTILLLSLRLTGNRFAKAVVGVWVSVFRNTPLLVQLMFW 77 Query: 149 YKSVLSVLP 157 Y + + LP Sbjct: 78 YFAAWNWLP 86 >gi|261377587|ref|ZP_05982160.1| polar amino amino acid ABC transporter, PAAT family, permease protein [Neisseria cinerea ATCC 14685] gi|269146335|gb|EEZ72753.1| polar amino amino acid ABC transporter, PAAT family, permease protein [Neisseria cinerea ATCC 14685] Length = 248 Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 46/121 (38%), Positives = 74/121 (61%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +AL + A+I EI R+G+ ++ +GQMEAA +LG+T+ +A R V+LPQA+R ++PPL S+ Sbjct: 122 LALVANSGAYICEIFRAGIQSIDKGQMEAARSLGMTYPQAMRYVILPQALRRMLPPLASE 181 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++ LLK+SSL + A+L V TI + E + IYL ++ + RL Sbjct: 182 FITLLKDSSLLSVIAVAELAYVQNTITGRYSVYEEPLYTVALIYLLMTTFLGWIFLRLEN 241 Query: 391 K 391 + Sbjct: 242 R 242 >gi|153938371|ref|YP_001390528.1| His/Glu/Gln/Arg/opine ABC transporter permease [Clostridium botulinum F str. Langeland] gi|170756986|ref|YP_001780803.1| His/Glu/Gln/Arg/opine ABC transporter permease [Clostridium botulinum B1 str. Okra] gi|152934267|gb|ABS39765.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Clostridium botulinum F str. Langeland] gi|169122198|gb|ACA46034.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Clostridium botulinum B1 str. Okra] gi|295318609|gb|ADF98986.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Clostridium botulinum F str. 230613] Length = 222 Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 56/176 (31%), Positives = 100/176 (56%), Gaps = 15/176 (8%) Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235 L + +T+ + + + G++L++ R + K ++ +YIS F G P L Sbjct: 17 LKYAHITLSIAILSMIIAVLFGVILAVI-----RMYKVKVLHSISEIYISFFR--GTPIL 69 Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295 + + L Y G I P +M++ IALS +A++AEI+R ++++ +G Sbjct: 70 IQLFLFY--------YGLPQIIPAFKEIPAYMAVVIALSMNGSAYMAEIIRGAIMSIDKG 121 Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 QMEA+++LG+T +A + ++LPQA R IP L + +++LLK+SSLA VG A+++S Sbjct: 122 QMEASLSLGMTEFQAMKRIILPQAARVAIPSLGNSFIDLLKSSSLAFTVGVAEILS 177 >gi|149926671|ref|ZP_01914931.1| ABC amino acid transporter, inner membrane subunit [Limnobacter sp. MED105] gi|149824600|gb|EDM83816.1| ABC amino acid transporter, inner membrane subunit [Limnobacter sp. MED105] Length = 246 Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 46/134 (34%), Positives = 82/134 (61%), Gaps = 7/134 (5%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 +F++ + L +TA+ +AE V+SG++++ RGQ A ALGLT + R VLLP A R I+ Sbjct: 109 QFLASVVCLGLFTASRVAEQVKSGILSLSRGQRAAGYALGLTEGQTYRFVLLPMAYRIIV 168 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 PP+TS+ +NL+KNSS+A+ +G +L +T + E+ + Y++ +++ + Sbjct: 169 PPMTSEAMNLIKNSSVALTIGLTELTF-------RTREMGEVTFAFFEAYIAATVLYVIV 221 Query: 385 MNRLNAKIALKEKK 398 +N +AL E++ Sbjct: 222 AMSVNRVMALVERR 235 Score = 39.7 bits (91), Expect = 0.89, Method: Compositional matrix adjust. Identities = 23/50 (46%), Positives = 37/50 (74%), Gaps = 2/50 (4%) Query: 100 AFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 A +G+I T+ G+L+G R +++K +A++ YVE+FRNI PL+V FFL+ Sbjct: 38 AVAGVIAFTV-GSLMGVLRTASSKPLAFLGNAYVELFRNI-PLIVQFFLW 85 >gi|104780400|ref|YP_606898.1| glutamate/aspartate ABC transporter permease [Pseudomonas entomophila L48] gi|95109387|emb|CAK14087.1| glutamate/aspartate ABC transporter, permease protein [Pseudomonas entomophila L48] Length = 248 Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 49/128 (38%), Positives = 76/128 (59%) Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326 +S+ I L +TAA + E VR+G+ A+PRGQ A A+G + + VLLPQA R IIPP Sbjct: 112 ISVVICLGLFTAARVCEQVRTGIQALPRGQESAGRAMGFSLPQIYMNVLLPQAYRIIIPP 171 Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386 LTS++LN+ KNSS+A +G +L++ + E + IY +L++ + L M Sbjct: 172 LTSEFLNVFKNSSVASLIGLMELLAQTKQTAEFSANLFEAFTLATLIYFTLNMGLMLLMR 231 Query: 387 RLNAKIAL 394 + K+A+ Sbjct: 232 MVEKKVAV 239 Score = 43.1 bits (100), Expect = 0.069, Method: Compositional matrix adjust. Identities = 22/49 (44%), Positives = 32/49 (65%) Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLP 157 ++G+L+G R N+LV+ I YVE+FRN+P LV +F Y V +LP Sbjct: 45 LLGSLLGVMRTVPNRLVSGIATAYVELFRNVPLLVQLFIWYFLVPDLLP 93 >gi|116629207|ref|YP_814379.1| ABC-type amino acid transport system, permease and periplasmic component [Lactobacillus gasseri ATCC 33323] gi|116094789|gb|ABJ59941.1| amino acid ABC transporter membrane protein, PAAT family / amino acid ABC transporter substrate-binding protein, PAAT family [Lactobacillus gasseri ATCC 33323] Length = 501 Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 43/122 (35%), Positives = 78/122 (63%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IA+ + A++AE +RSG+ ++P+GQMEAA +LGL+ +KA R V++PQA+++I P L ++ Sbjct: 373 IAIGLNSGAYVAEDIRSGIDSLPKGQMEAARSLGLSRQKAFRYVIIPQAIKNIWPALGNE 432 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++ LLK+SSL +G A+L+ + T + + + I M IY ++ + +N Sbjct: 433 FITLLKDSSLVSVIGVAELMYQTQLVQTSTYKGVLPLFIAMIIYFIMTFSLTRLLNHFEK 492 Query: 391 KI 392 ++ Sbjct: 493 RM 494 >gi|163854809|ref|YP_001629107.1| putative amino acid ABC transporter permease protein [Bordetella petrii DSM 12804] gi|163258537|emb|CAP40836.1| putative amino acid ABC transporter permease protein [Bordetella petrii] Length = 366 Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 72/222 (32%), Positives = 110/222 (49%), Gaps = 20/222 (9%) Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239 TL + T F F F G++L+L R KAL ++YI LI G+P + L Sbjct: 162 TLILSTFGIAFAFPF--GVLLAL-----GRKSKMPAIKALCVVYIE--LIRGVPLISL-- 210 Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299 L +L F +G S + + IA+ + AA+IAE VR GL A+P+GQ E Sbjct: 211 ----LFMSSVMLPLFLPVGFSI--DKLLRAQIAIIMFAAAYIAETVRGGLQAIPKGQYEG 264 Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV---SVGGTI 356 A +LGL + + R ++LPQA+R +IPPL S ++ L K++SL V +G DL + Sbjct: 265 ADSLGLNYWQQMRKIILPQALRIVIPPLVSIFIALFKDTSLVVIIGIFDLTLAAKAALSD 324 Query: 357 INQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 G +E + IY ++ + RL ++A K+ Sbjct: 325 AAWRGFGVEAYVFISLIYFVFCFSMSKYSQRLEKRLATGHKR 366 >gi|260463004|ref|ZP_05811207.1| polar amino acid ABC transporter, inner membrane subunit [Mesorhizobium opportunistum WSM2075] gi|259031125|gb|EEW32398.1| polar amino acid ABC transporter, inner membrane subunit [Mesorhizobium opportunistum WSM2075] Length = 224 Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 44/94 (46%), Positives = 64/94 (68%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + IAL+ A FI EIV +G+ +VP GQ+EAA+A GL+ + R V+LPQAMR ++P Sbjct: 89 FTAGIIALTNLAACFICEIVVAGIRSVPTGQVEAALASGLSRWQRLRQVVLPQAMRIVLP 148 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359 PL QY+ L+K+SS+ A+G DL VG ++ + Sbjct: 149 PLVGQYVLLIKDSSVVSAIGLTDLTRVGWLVVQR 182 >gi|116748260|ref|YP_844947.1| polar amino acid ABC transporter inner membrane subunit [Syntrophobacter fumaroxidans MPOB] gi|116697324|gb|ABK16512.1| polar amino acid ABC transporter, inner membrane subunit [Syntrophobacter fumaroxidans MPOB] Length = 246 Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 59/203 (29%), Positives = 101/203 (49%), Gaps = 26/203 (12%) Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY-----QLHFDKPV 250 +G L +F ++R + +LY+ F G P L+ I + Y +H+D PV Sbjct: 61 MGFCLGVFGG-IARTSRSVLARETAMLYVEFFR--GTPLLIQIYIFYFCVAAAVHYDNPV 117 Query: 251 L-GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309 + G F+ L+ ++ A+I E+VR+G+ ++ RGQ+EAA++ GL + Sbjct: 118 IIGMFS-----------------LAVFSGAYITEMVRAGIESIDRGQIEAAMSTGLNDWE 160 Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369 R V+ PQA R IIPP+ Q+++++K+SSL + +L I T + E L Sbjct: 161 TMRYVVFPQAFRRIIPPVAGQFVSVIKDSSLLSVISVRELTKASEIINATTYKTFEAYLP 220 Query: 370 WMFIYLSLSIMIALFMNRLNAKI 392 +YL ++ ++ RL KI Sbjct: 221 LAALYLIITYPLSYLTQRLEQKI 243 >gi|291459896|ref|ZP_06599286.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Oribacterium sp. oral taxon 078 str. F0262] gi|291417237|gb|EFE90956.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Oribacterium sp. oral taxon 078 str. F0262] Length = 228 Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 63/212 (29%), Positives = 113/212 (53%), Gaps = 16/212 (7%) Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGK-ALPLLYISTFL--IFGLPTLVLIALKYQLH 245 I VF+ ++G+ L L + R ++TGK +P + +L I G PT++ + + Y Sbjct: 30 ITVFALLIGVALGLLIA-IIRTTADRTGKWRIPDFFCRIYLTVIRGTPTMIQLMIFYYCI 88 Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305 F +G+F F G S IA +AA++AEI+RSG++++P GQMEA +LG Sbjct: 89 F----VGRF-FSGVFVAS-------IAFGLNSAAYVAEIIRSGILSIPAGQMEAGRSLGF 136 Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365 + + R +++PQA ++++P + ++++ L+K +++A V DL I QT A Sbjct: 137 NYVETMRYIIMPQAFKNVLPAIFNEFIVLIKETAVAGYVSVRDLTKGADNIRAQTYDAWL 196 Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 +L IYL L++ +L ++ E+ Sbjct: 197 PLLAAGLIYLILTMFFTTLEKKLERRLKQGER 228 >gi|239833590|ref|ZP_04681918.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium LMG 3301] gi|239821653|gb|EEQ93222.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium LMG 3301] Length = 335 Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 47/121 (38%), Positives = 75/121 (61%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +ALS A++ EI R+G+ ++PRGQ E A ALGL + LV+LPQAMR IIPP +Q Sbjct: 208 LALSLCYGAYMTEIFRAGIESIPRGQQEGAAALGLGPSQTMWLVILPQAMRIIIPPTGNQ 267 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++ +LK+SSL +G +L+ + T + IE+++ IY +LS+++ +L A Sbjct: 268 FIAMLKDSSLVSVIGVWELMYLARTQGQTEFRHIEMLITASMIYWALSVVLEYGQAKLEA 327 Query: 391 K 391 + Sbjct: 328 R 328 >gi|238853899|ref|ZP_04644262.1| ABC-type amino acid transport system, permease and periplasmic component [Lactobacillus gasseri 202-4] gi|238833485|gb|EEQ25759.1| ABC-type amino acid transport system, permease and periplasmic component [Lactobacillus gasseri 202-4] Length = 498 Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 43/122 (35%), Positives = 78/122 (63%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IA+ + A++AE +RSG+ ++P+GQMEAA +LGL+ +KA R V++PQA+++I P L ++ Sbjct: 370 IAIGLNSGAYVAEDIRSGIDSLPKGQMEAARSLGLSRQKAFRYVIIPQAIKNIWPALGNE 429 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++ LLK+SSL +G A+L+ + T + + + I M IY ++ + +N Sbjct: 430 FITLLKDSSLVSVIGVAELMYQTQLVQTSTYKGVLPLFIAMIIYFIMTFSLTRLLNHFEK 489 Query: 391 KI 392 ++ Sbjct: 490 RM 491 >gi|282851008|ref|ZP_06260382.1| ABC transporter, permease protein [Lactobacillus gasseri 224-1] gi|311111018|ref|ZP_07712415.1| amino acid ABC transporter, permease/substrate-binding protein [Lactobacillus gasseri MV-22] gi|282557960|gb|EFB63548.1| ABC transporter, permease protein [Lactobacillus gasseri 224-1] gi|311066172|gb|EFQ46512.1| amino acid ABC transporter, permease/substrate-binding protein [Lactobacillus gasseri MV-22] Length = 498 Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 43/122 (35%), Positives = 78/122 (63%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IA+ + A++AE +RSG+ ++P+GQMEAA +LGL+ +KA R V++PQA+++I P L ++ Sbjct: 370 IAIGLNSGAYVAEDIRSGIDSLPKGQMEAARSLGLSRQKAFRYVIIPQAIKNIWPALGNE 429 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++ LLK+SSL +G A+L+ + T + + + I M IY ++ + +N Sbjct: 430 FITLLKDSSLVSVIGVAELMYQTQLVQTSTYKGVLPLFIAMIIYFIMTFSLTRLLNHFEK 489 Query: 391 KI 392 ++ Sbjct: 490 RM 491 >gi|222148129|ref|YP_002549086.1| ABC transporter membrane spanning protein [Agrobacterium vitis S4] gi|221735117|gb|ACM36080.1| ABC transporter membrane spanning protein [Agrobacterium vitis S4] Length = 219 Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 41/99 (41%), Positives = 63/99 (63%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P +++ +AL+C+TAAF+ EI R + AVP+GQ EA +L LT+R+ RL++LPQAMR Sbjct: 84 PAWLAAGVALTCWTAAFLTEIWRGCVEAVPKGQWEAGTSLALTYRQQMRLIILPQAMRIA 143 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362 I P + ++K ++L +GF +L G + N T Q Sbjct: 144 IAPTAGFSVQVVKGTALTSIIGFVELSKAGTIVTNATFQ 182 >gi|15902771|ref|NP_358321.1| amino acid ABC transporter permease [Streptococcus pneumoniae R6] gi|15458319|gb|AAK99531.1| ABC transporter membrane-spanning permease - glutamine transport [Streptococcus pneumoniae R6] Length = 229 Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 62/210 (29%), Positives = 117/210 (55%), Gaps = 21/210 (10%) Query: 195 VLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF---GLPTLVLIALKYQL-HFDKPV 250 +LG+VL+ F R K PL++++ ++ G P +V I + + L H + P Sbjct: 35 ILGVVLA-FGQR---------SKFKPLVWLANLYVWIFRGTPMMVQIMIAFALMHINAPT 84 Query: 251 LGQFNFIGG--STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308 + Q +G S + P + +S + A+++EIVR+G+ AVP+GQ+EAA +LG+ + Sbjct: 85 I-QIGILGVDFSRLIPGIL----IISMNSGAYVSEIVRAGINAVPKGQLEAAYSLGIRPK 139 Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368 A R V+LPQA+++I+P L ++++ ++K+SSL A+G +L + T+ T + +L Sbjct: 140 NAMRYVILPQAVKNILPALGNEFITIIKDSSLLSAIGVMELWNGATTVSTTTYLPLTPLL 199 Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 F YL ++ ++ + + + +KK Sbjct: 200 FAAFYYLIMTSILTVALKAFEKHMGQGDKK 229 >gi|320546339|ref|ZP_08040656.1| arginine ABC superfamily ATP binding cassette transporter, permease protein [Streptococcus equinus ATCC 9812] gi|320448993|gb|EFW89719.1| arginine ABC superfamily ATP binding cassette transporter, permease protein [Streptococcus equinus ATCC 9812] Length = 228 Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 54/179 (30%), Positives = 106/179 (59%), Gaps = 14/179 (7%) Query: 223 YISTFLIF---GLPTLVLIALKYQ-LHF-DKPVLGQFNFIGGSTVSPEFMSLY---IALS 274 +I++F ++ G P +V I + + +HF + P+ +G + +F L I +S Sbjct: 51 WITSFYVWVFRGTPMVVQIMIAFAWMHFSNAPI------VGFGVLDLDFSRLLPGIIIIS 104 Query: 275 CYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNL 334 + A+I+EIVR+G+ AVP+GQ+EAA +LG+ A R V+LPQA+++I+P L ++++ + Sbjct: 105 LNSGAYISEIVRAGIEAVPKGQLEAAYSLGIRPVNAMRYVILPQALKNILPALGNEFITI 164 Query: 335 LKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393 +K+SSL +G +L + +++ T I +L F YL ++ +++ + +L ++ Sbjct: 165 IKDSSLLQTIGVMELWNGAQSVVTATYLPITPLLFAAFYYLMVTTVLSFLLKKLETRMG 223 >gi|300718488|ref|YP_003743291.1| Amino acid ABC transporter, permease protein [Erwinia billingiae Eb661] gi|299064324|emb|CAX61444.1| Amino acid ABC transporter, permease protein [Erwinia billingiae Eb661] Length = 308 Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 82/278 (29%), Positives = 138/278 (49%), Gaps = 28/278 (10%) Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196 R I LVV+ L +V S++ P + F L +T+ A V F Sbjct: 23 RWISALVVLLMLAAAVSSMVQNPRFEWQVIADSFTQQSILQGVLMTLQLTAISVVLGFTG 82 Query: 197 GIVLSLFATRLSRHFHEKTGKALPLL----YISTFLIFGLPTLVLIALKY-------QLH 245 G VL+L RLS + P+L + T+ G+P LV + L Y ++ Sbjct: 83 GTVLALM--RLSSN---------PVLVSVSWAYTWFFRGVPMLVQLFLWYNIAALYPKVS 131 Query: 246 FDKPVLGQ-FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304 P +G+ ++ S +SP F + IAL + AA+ AEIVR+G+ +V GQ+EAA ALG Sbjct: 132 VSLPWVGELWSASSNSLISP-FSAAVIALVMHQAAYAAEIVRAGIQSVGNGQLEAAKALG 190 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364 + R +LPQAMR+I+PP ++ + LK +++ + D++ I +T Q I Sbjct: 191 YRPSEIFRYTVLPQAMRAILPPAGNEIIGQLKTTAVVSVIALQDVLFSAQIIYQRTYQVI 250 Query: 365 EIILIWMFIYLSLSIMIAL---FMNRLNAK-IALKEKK 398 ++L+ YL ++ ++++ ++ R A+ + KEK+ Sbjct: 251 PLLLVATLWYLLMTSVLSVGQFYVERYFARGVTRKEKR 288 >gi|77460758|ref|YP_350265.1| amino acid ABC transporter permease [Pseudomonas fluorescens Pf0-1] gi|77384761|gb|ABA76274.1| L-glutamate ABC transporter membrane protein / L-aspartate ABC transporter membrane protein [Pseudomonas fluorescens Pf0-1] Length = 223 Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 57/206 (27%), Positives = 103/206 (50%), Gaps = 23/206 (11%) Query: 195 VLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248 +LG +L+L S+ G +++PLL + T+ +P L++ D Sbjct: 35 ILGTLLALMRLSHSKLLSSIAGAYVNYFRSIPLLLVITWFYLAVP----FVLRWITGEDT 90 Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308 P+ F S +A + AA+ EIVR+G+ ++P+GQM AA ALG+T+ Sbjct: 91 PI-------------GAFTSCIVAFMMFEAAYFCEIVRAGVQSIPKGQMGAAQALGMTYG 137 Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368 + RL++LPQA R + P L Q + L +++SL VG D ++ + G++ E ++ Sbjct: 138 QMMRLIILPQAFRKMTPLLLQQSIILFQDTSLVYTVGLVDFLNASRASGDIIGRSNEFLI 197 Query: 369 IWMFIYLSLSIMIALFMNRLNAKIAL 394 +Y ++S ++ + RL + A+ Sbjct: 198 FAGLVYFTISFAASVLVKRLQKRFAV 223 Score = 40.8 bits (94), Expect = 0.42, Method: Compositional matrix adjust. Identities = 27/65 (41%), Positives = 39/65 (60%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151 G + T L G++ I+GTL+ RLS +KL++ I YV FR+IP L+VI + Y + Sbjct: 18 GMLMTLKLMALGVVGGIILGTLLALMRLSHSKLLSSIAGAYVNYFRSIPLLLVITWFYLA 77 Query: 152 VLSVL 156 V VL Sbjct: 78 VPFVL 82 >gi|83746636|ref|ZP_00943686.1| GltK [Ralstonia solanacearum UW551] gi|207742331|ref|YP_002258723.1| glutamate/aspartate transmembrane protein [Ralstonia solanacearum IPO1609] gi|83726770|gb|EAP73898.1| GltK [Ralstonia solanacearum UW551] gi|206593721|emb|CAQ60648.1| glutamate/aspartate transmembrane protein [Ralstonia solanacearum IPO1609] Length = 227 Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 44/125 (35%), Positives = 78/125 (62%) Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327 S +A + + AA+ +EI+R+G+ +V RGQM AA A+G+T+ +A RLV+LPQA R++IP L Sbjct: 101 SALVAFALFEAAYYSEIIRAGIQSVSRGQMFAAYAMGMTYGQAMRLVILPQAFRNMIPLL 160 Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387 +Q + L +++SL +D + I + G+ +E++L F+Y + ++ + R Sbjct: 161 LTQAIILFQDTSLVYVSALSDFFTQAYNIGERDGRIVELLLFAGFVYFVVCFGASVLVKR 220 Query: 388 LNAKI 392 L K+ Sbjct: 221 LQKKV 225 >gi|111023903|ref|YP_706875.1| glutamate transport system permease protein GluC [Rhodococcus jostii RHA1] gi|110823433|gb|ABG98717.1| glutamate transport system permease protein GluC [Rhodococcus jostii RHA1] Length = 215 Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 50/134 (37%), Positives = 80/134 (59%), Gaps = 1/134 (0%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P F + AL+ Y +AF E VRSG+ A+P GQ EA ++GLT + R ++LPQA RS+ Sbjct: 82 PFFWAAVAALAIYYSAFFCEAVRSGINAIPVGQFEAGRSIGLTFGGSLRYIVLPQAFRSV 141 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM-FIYLSLSIMIA 382 +PPL + ++ L K+S++A A G A+L++ +I + QA+ IL +YL ++I Sbjct: 142 VPPLINVFIALTKSSAIASAFGVAELLTRAEGVIAEESQAVLWILAATSLLYLVITIPAG 201 Query: 383 LFMNRLNAKIALKE 396 N + K+A+ Sbjct: 202 TIANLVEKKVAVAR 215 >gi|307321129|ref|ZP_07600533.1| polar amino acid ABC transporter, inner membrane subunit [Sinorhizobium meliloti AK83] gi|306893204|gb|EFN23986.1| polar amino acid ABC transporter, inner membrane subunit [Sinorhizobium meliloti AK83] Length = 323 Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 49/121 (40%), Positives = 75/121 (61%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +ALS A++ EI R+G+ ++PRGQ E A ALGL+ + LV+LPQAMR IIPP +Q Sbjct: 196 LALSLCYGAYMTEIFRAGIESIPRGQTEGATALGLSPSQTMGLVILPQAMRVIIPPTGNQ 255 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++ +LK+SSL VG +L+ + T + IE+++ IY LSI + +R+ A Sbjct: 256 FIAMLKDSSLISVVGVWELMYLARTQGQTEFRHIEMLITASMIYWILSIGLEYMQSRVEA 315 Query: 391 K 391 + Sbjct: 316 R 316 >gi|58040006|ref|YP_191970.1| amino acid ABC transporter permease [Gluconobacter oxydans 621H] gi|58002420|gb|AAW61314.1| Amino acid ABC transporter binding protein and permease protein [Gluconobacter oxydans 621H] Length = 508 Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 59/177 (33%), Positives = 93/177 (52%), Gaps = 28/177 (15%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 + PLL F+ +GLP G +SP FM+ ++L Sbjct: 347 RGTPLLIQVLFIFYGLPAF-----------------------GIRLSP-FMAGVLSLGLN 382 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 AA+ AE R+GL++VPRGQMEAAIAL +TH +A RLV++PQA R+++P +T+ +++LLK Sbjct: 383 YAAYEAENYRAGLLSVPRGQMEAAIALNMTHWQALRLVIVPQAFRTVVPVMTNDFISLLK 442 Query: 337 NSSLAVAVGFADL----VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 +SSL + +L V + T + G I + L ++ + L + + RL Sbjct: 443 DSSLVSVITLTELSQTYVRLSSTYYDYFGTGIMVGLAYLLLGLPFVRLARMAERRLG 499 >gi|300791008|ref|YP_003771299.1| polar amino acid ABC transporter permease [Amycolatopsis mediterranei U32] gi|299800522|gb|ADJ50897.1| permease component of ABC-type amino acid transport system [Amycolatopsis mediterranei U32] Length = 315 Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 43/111 (38%), Positives = 73/111 (65%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 +F + + L AA++AEIVR G+ +V GQ+EAA ALG++ + R ++LPQAMR II Sbjct: 161 QFTASLLGLGLNEAAYMAEIVRGGIQSVDSGQLEAASALGMSRTRTLRRIILPQAMRVII 220 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375 PP ++ +++LK +SL VA+G+ +L+ TI +Q + + ++++ YL Sbjct: 221 PPTGNETISMLKTTSLVVAIGYFELMVAAQTIYSQNLKTVPLLIVAALWYL 271 >gi|116513635|ref|YP_812541.1| ABC-type amino acid transport system, permease [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|116092950|gb|ABJ58103.1| amino acid ABC transporter membrane protein 2, PAAT family [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] Length = 222 Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 68/213 (31%), Positives = 114/213 (53%), Gaps = 15/213 (7%) Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240 +T++ + + SFV+G+ L L R +R KT + ++ + +I LP L++I Sbjct: 22 VTIEVSVISIILSFVIGLALGLI--RFTR-IDAKTTRISKVVGVIIDIIRNLPLLLIIFF 78 Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300 Y F PV+G F + IA+ + +A IAE+VRSG++AV GQME A Sbjct: 79 SY---FGLPVMG--------IRVDAFQASVIAMVVFESAMIAEVVRSGIMAVDPGQMEGA 127 Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ- 359 + G+T+ +A V+ PQA+ +IP L SQ+++L+K++SLA + +L+ I NQ Sbjct: 128 RSNGMTYMQAMTHVVFPQALSKMIPALLSQFVSLIKDTSLATIIVLPELLYHAEIIYNQN 187 Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 T I + L +Y + ++ F N L+ +I Sbjct: 188 TKYMIPMYLAVAVMYFIICFALSSFANYLSKRI 220 >gi|319782447|ref|YP_004141923.1| polar amino acid ABC transporter inner membrane subunit [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317168335|gb|ADV11873.1| polar amino acid ABC transporter, inner membrane subunit [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 224 Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 44/94 (46%), Positives = 64/94 (68%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + IAL+ A FI EIV +G+ +VP GQ+EAA+A GL+ + R V+LPQAMR ++P Sbjct: 89 FTAGIIALTNLAACFICEIVVAGIRSVPTGQVEAALASGLSRWQRMRQVVLPQAMRIVLP 148 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359 PL QY+ L+K+SS+ A+G DL VG ++ + Sbjct: 149 PLVGQYVLLIKDSSVVSAIGLTDLTRVGWLVVQR 182 >gi|312959229|ref|ZP_07773747.1| glutamate/aspartate transport system permease [Pseudomonas fluorescens WH6] gi|311286489|gb|EFQ65052.1| glutamate/aspartate transport system permease [Pseudomonas fluorescens WH6] Length = 223 Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 57/206 (27%), Positives = 103/206 (50%), Gaps = 23/206 (11%) Query: 195 VLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248 +LG +L+L S+ G +++PLL + T+ +P L++ D Sbjct: 35 ILGTLLALMRLSSSKLLSRVAGAYVNYFRSIPLLLVITWFYLAVP----FVLRWITGEDT 90 Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308 P+ F S +A + AA+ EIVR+G+ ++P+GQM AA A+G+T+ Sbjct: 91 PI-------------GAFTSCVVAFMMFEAAYFCEIVRAGVQSIPKGQMSAAQAMGMTYG 137 Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368 + RL++LPQA R + P L Q + L +++SL VG D ++ + + G++ E ++ Sbjct: 138 QTMRLIILPQAFRKMTPLLLQQSIILFQDTSLVYTVGLVDFLNSARSNGDIIGRSNEFLI 197 Query: 369 IWMFIYLSLSIMIALFMNRLNAKIAL 394 +Y +S +L + RL + A+ Sbjct: 198 FAGVVYFIISFSASLLVKRLQKRFAV 223 Score = 43.9 bits (102), Expect = 0.046, Method: Compositional matrix adjust. Identities = 27/65 (41%), Positives = 40/65 (61%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151 G V T L G++ I+GTL+ RLS++KL++ + YV FR+IP L+VI + Y + Sbjct: 18 GMVMTLQLMVMGVVGGIILGTLLALMRLSSSKLLSRVAGAYVNYFRSIPLLLVITWFYLA 77 Query: 152 VLSVL 156 V VL Sbjct: 78 VPFVL 82 >gi|300783425|ref|YP_003763716.1| amino acid ABC transporter permease [Amycolatopsis mediterranei U32] gi|299792939|gb|ADJ43314.1| permease component of ABC-type amino acid transport system [Amycolatopsis mediterranei U32] Length = 292 Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 62/191 (32%), Positives = 101/191 (52%), Gaps = 12/191 (6%) Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252 + VLGIV++L R + YI F GLP L+ I L Y L PV+ Sbjct: 72 AIVLGIVIALL-----RRSANPVARWFAAGYIWIF--RGLPVLLQILLWYNLALVFPVID 124 Query: 253 QFNFIGGST--VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 + T + F + ++ L+ +A++AEIVR+GL +V GQ EAA ++G+T Sbjct: 125 IPFLVHEQTNVLISAFTAAFLGLALNESAYMAEIVRAGLNSVDSGQTEAAKSIGMTPAAT 184 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL-- 368 R V+LPQAMR IIPP + ++N+LK +S+A +G +L+ I + +E +L Sbjct: 185 LRRVVLPQAMRVIIPPTGNDFINMLKGTSMASVIGVTELIHAANNISSNNLLVMETLLAA 244 Query: 369 -IWMFIYLSLS 378 +W + ++++ Sbjct: 245 AVWYMVVVTVA 255 Score = 36.6 bits (83), Expect = 7.9, Method: Compositional matrix adjust. Identities = 25/76 (32%), Positives = 37/76 (48%), Gaps = 5/76 (6%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151 G +NT LA A ++G ++ R SAN + W Y+ +FR +P L+ I Y Sbjct: 57 GLLNTVVLAVLSQAVAIVLGIVIALLRRSANPVARWFAAGYIWIFRGLPVLLQILLWYNL 116 Query: 152 VLSVLPIPDHSIVLPF 167 L V P+ D +PF Sbjct: 117 AL-VFPVID----IPF 127 >gi|257463486|ref|ZP_05627880.1| amino acid ABC transporter permease [Fusobacterium sp. D12] gi|317061044|ref|ZP_07925529.1| amino acid ABC transporter permease [Fusobacterium sp. D12] gi|313686720|gb|EFS23555.1| amino acid ABC transporter permease [Fusobacterium sp. D12] Length = 225 Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 44/147 (29%), Positives = 85/147 (57%) Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309 +L F+G +P + IA + A++AEI+R+G+ + +GQ EA ALGL++ + Sbjct: 79 ILANIVFVGALRETPILLVAGIAFGMNSGAYVAEIIRAGIEGLEKGQTEAGRALGLSYAQ 138 Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369 + +++PQA++ I+P L S+++ LLK +S+ +G DL+ I +QT + +E +L Sbjct: 139 TMKFIIIPQAIKKILPALVSEFITLLKETSIVGFIGGVDLLRSANIITSQTYRGVEPLLA 198 Query: 370 WMFIYLSLSIMIALFMNRLNAKIALKE 396 IYL L+ + + M ++ + + + Sbjct: 199 VGIIYLILTSIFTILMRKVEKGLKVSD 225 >gi|161870370|ref|YP_001599540.1| amino acid ABC transporter, permease protein [Neisseria meningitidis 053442] gi|161595923|gb|ABX73583.1| amino acid ABC transporter, permease protein [Neisseria meningitidis 053442] Length = 213 Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 47/121 (38%), Positives = 74/121 (61%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +AL + A+I EI R+G+ ++ +GQMEAA +LGLT+ +A R V+LPQA+R ++PPL S+ Sbjct: 87 LALIANSGAYICEIFRAGIQSIDKGQMEAARSLGLTYPQAMRYVILPQALRRMLPPLASE 146 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++ LLK+SSL + A+L V TI + E + IYL ++ + RL Sbjct: 147 FITLLKDSSLLSVIAVAELAYVQNTITGRYSVYEEPLYTVALIYLLMTTFLGWIFLRLEK 206 Query: 391 K 391 + Sbjct: 207 R 207 >gi|296269105|ref|YP_003651737.1| polar amino acid ABC transporter inner membrane subunit [Thermobispora bispora DSM 43833] gi|296091892|gb|ADG87844.1| polar amino acid ABC transporter, inner membrane subunit [Thermobispora bispora DSM 43833] Length = 288 Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 44/103 (42%), Positives = 68/103 (66%), Gaps = 3/103 (2%) Query: 258 GGST---VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLV 314 GGS V EF ++ L+ Y + +AEIVR+G+ AVPRG+ EA A+GL + RL+ Sbjct: 127 GGSLLGLVVSEFAAVVFGLTVYNGSVLAEIVRAGIRAVPRGESEAGYAMGLRKNQVMRLI 186 Query: 315 LLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII 357 LLPQA+ S++P + SQ + LLK+++L V +ADL++ G ++ Sbjct: 187 LLPQAITSMMPAIVSQLVVLLKDTALGFIVAYADLLNAGARVV 229 >gi|330505354|ref|YP_004382223.1| amino acid ABC transporter permease [Pseudomonas mendocina NK-01] gi|328919640|gb|AEB60471.1| amino acid ABC transporter permease [Pseudomonas mendocina NK-01] Length = 248 Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 47/129 (36%), Positives = 77/129 (59%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 ++S+ + L +TAA + E VR+G+ A+P+GQ AA A+G + VLLPQA R IIP Sbjct: 111 YLSVVVCLGLFTAARVCEQVRTGIEALPKGQTAAAYAMGFRLPQIYTNVLLPQAYRIIIP 170 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PLTS++LN+ KNSS+A +G +L++ + E + IY +L++ + + M Sbjct: 171 PLTSEFLNIFKNSSVASLIGLMELLAQTKQTAEFSANLFEAFTLATLIYFTLNMSLMMIM 230 Query: 386 NRLNAKIAL 394 + K+A+ Sbjct: 231 RMIEKKVAV 239 Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust. Identities = 34/104 (32%), Positives = 49/104 (47%), Gaps = 12/104 (11%) Query: 56 NLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVG 115 N GI F S G E +Y + G T +A +G I A +G+L+G Sbjct: 4 NWDWGIYFKSTGIGSE------------TYLDWFITGLGWTIAIALAGWIIALALGSLLG 51 Query: 116 AGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIP 159 R N+ ++ + YVE+FRN+P LV +F Y V +LP P Sbjct: 52 VMRTLPNRWLSGLATAYVEIFRNVPLLVQLFLWYFLVPDLLPEP 95 >gi|209527655|ref|ZP_03276153.1| polar amino acid ABC transporter, inner membrane subunit [Arthrospira maxima CS-328] gi|209491883|gb|EDZ92240.1| polar amino acid ABC transporter, inner membrane subunit [Arthrospira maxima CS-328] Length = 168 Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 50/129 (38%), Positives = 69/129 (53%), Gaps = 1/129 (0%) Query: 47 NVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIP 106 N+ N+++S + G GFL+ AGF I + I+PY Y +L G VNT + F G+I Sbjct: 41 NLNQNLQRSGIRFGFGFLNSTAGFAIGESIIPYQPTDPYRQVLLAGLVNTLRVMFFGIIL 100 Query: 107 ATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLP 166 TI+G + G S N LV I VYVE+ RN P L+ + F Y L + P+ D V Sbjct: 101 TTIVGIVAGISYFSGNWLVRQIGLVYVEIVRNTPLLLQLLFWYGIFLQLPPVRDRLGVFN 160 Query: 167 FGMFLNNRG 175 +FL RG Sbjct: 161 -AIFLTQRG 168 >gi|194017115|ref|ZP_03055727.1| L-cystine transport system permease protein TcyL [Bacillus pumilus ATCC 7061] gi|194010983|gb|EDW20553.1| L-cystine transport system permease protein TcyL [Bacillus pumilus ATCC 7061] Length = 237 Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 69/191 (36%), Positives = 104/191 (54%), Gaps = 10/191 (5%) Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLV-LIALKYQLHFDKPVLGQFNFIGGSTVSPEFM 267 R F + L LY+S F G P +V L A Y L F VL + N G T P+ + Sbjct: 45 RLFRIPVLRQLVTLYVSFFR--GTPLIVQLFAFFYGLPF---VLTKVNDTFGLTFHPDMV 99 Query: 268 S-LYIAL---SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 S L +AL S ++AA + E+VRS L+AV +GQ+EAA +G+T R+A ++LPQA Sbjct: 100 SPLAVALITFSLHSAAHLTEVVRSALLAVDKGQLEAAKIVGMTTRQAMMRIILPQAFVVA 159 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 +P L +Q + LLK +SL+ +G +++ + I N Q +E L+ IY LSI L Sbjct: 160 LPNLGNQLIQLLKATSLSFTIGVLEIMGISRIIANDGYQFLETYLVSALIYWLLSIFFEL 219 Query: 384 FMNRLNAKIAL 394 L ++++ Sbjct: 220 AFALLEKRVSV 230 >gi|154686886|ref|YP_001422047.1| GlnP [Bacillus amyloliquefaciens FZB42] gi|154352737|gb|ABS74816.1| GlnP [Bacillus amyloliquefaciens FZB42] Length = 218 Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 58/181 (32%), Positives = 101/181 (55%), Gaps = 27/181 (14%) Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273 +T + LPLL I F F LP I +K + I + ++ AL Sbjct: 60 ETIRNLPLLLIIFFTFFALPE---IGIKLE-------------ITAAAIT--------AL 95 Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333 + + +A ++EI+RSGL +V +GQ+EAA + GLT+ + LV++PQA+R ++PP+ SQ+++ Sbjct: 96 TIFESAMLSEIIRSGLQSVDKGQIEAARSSGLTYTQTLFLVVMPQALRRMVPPIVSQFIS 155 Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQT---GQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 LLK++SLAV + +L+ + Q+ G I L+ +Y +++ ++L RL A Sbjct: 156 LLKDTSLAVVIALPELIHNAQILNGQSADGGYFFPIFLLAALMYFAVNYCLSLAARRLEA 215 Query: 391 K 391 + Sbjct: 216 R 216 >gi|119896731|ref|YP_931944.1| putative glutamine transport permease [Azoarcus sp. BH72] gi|119669144|emb|CAL93057.1| putative glutamine transport permease protein [Azoarcus sp. BH72] Length = 226 Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 44/127 (34%), Positives = 73/127 (57%) Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327 S Y + + AA+ AEI+RSG+ ++PRGQ+ A ALG T+ + RLV+LPQA R+++P L Sbjct: 98 SAYFTFTVFEAAYFAEIMRSGIQSIPRGQIGAGYALGFTYGQTMRLVVLPQAFRNMLPVL 157 Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387 +Q + L ++ SL A+G D I + + +E+ +Y L ++ + R Sbjct: 158 LTQTIVLFQDVSLVYAIGATDFFGAADKITQRDLRPVEMYTTVAAVYFVLCFSLSRLVKR 217 Query: 388 LNAKIAL 394 L +IA+ Sbjct: 218 LQTRIAI 224 >gi|226331012|ref|ZP_03806530.1| hypothetical protein PROPEN_04942 [Proteus penneri ATCC 35198] gi|225201807|gb|EEG84161.1| hypothetical protein PROPEN_04942 [Proteus penneri ATCC 35198] Length = 224 Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 48/138 (34%), Positives = 80/138 (57%), Gaps = 1/138 (0%) Query: 255 NFIGGSTVSP-EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313 N +G S S +S IA S + AA+ +EI+R+G+ +V +GQ A++ALG+T + RL Sbjct: 85 NVLGLSPKSDIRLISAMIAFSLFEAAYYSEIIRAGIQSVSKGQFSASLALGMTKSQTMRL 144 Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI 373 V+LPQA R++IP L +Q + L +++SL + D I + G +E+IL F+ Sbjct: 145 VILPQAFRAMIPLLLTQGIVLFQDTSLVYVLSLTDFFRTAANIGERDGTQVEMILFAGFV 204 Query: 374 YLSLSIMIALFMNRLNAK 391 Y +S ++ +N L + Sbjct: 205 YFVISFAASMLVNFLKKR 222 >gi|28870094|ref|NP_792713.1| glutamine ABC transporter permease [Pseudomonas syringae pv. tomato str. DC3000] gi|28853340|gb|AAO56408.1| glutamine ABC transporter, permease protein [Pseudomonas syringae pv. tomato str. DC3000] Length = 233 Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 56/148 (37%), Positives = 87/148 (58%), Gaps = 4/148 (2%) Query: 232 LPTLVLIALKYQLHFDKP-VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290 +PTLV + L Y F P +L + I S S E++ IAL AA+ +E +RSGL Sbjct: 69 VPTLVQLMLWY---FGIPTLLSESTQIWLSGYSTEYLFSVIALGLCQAAYFSEDIRSGLR 125 Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 A+P GQ+EA+ ALGL + ++ R V+LPQ +R+ +P L + + L KN+SL +A+G +L Sbjct: 126 AIPAGQVEASRALGLGYVRSMRYVILPQGVRNCLPSLINHTVLLFKNTSLVMAIGVVELT 185 Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLS 378 + N T + E L+ +YL++S Sbjct: 186 YATREVENYTFRTFEAYLVATVVYLAIS 213 >gi|330957764|gb|EGH58024.1| amino acid ABC transporter permease [Pseudomonas syringae pv. maculicola str. ES4326] Length = 221 Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 61/220 (27%), Positives = 108/220 (49%), Gaps = 23/220 (10%) Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPT 234 +T+ A V +LG VL+L ++ G +++PLL + T+ +P Sbjct: 19 MTLKLMAMGVVGGLLLGTVLALMRLSSNKLLANVAGAYVNYFRSIPLLLVITWFYLAVP- 77 Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294 L++ D P+ F S +A + AA+ EIVR+G+ ++ + Sbjct: 78 ---FVLRWITGEDTPI-------------GAFASCVVAFMMFEAAYFCEIVRAGVQSISK 121 Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354 GQM AA ALG+ + + RL++LPQA R + P L Q + L +++SL VG D ++ Sbjct: 122 GQMGAAQALGMNYSQMMRLIILPQAFRKMTPLLLQQSIILFQDTSLVYTVGLVDFLNASR 181 Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394 + + G+A E ++I +Y ++S +L + RL + A+ Sbjct: 182 SSGDIIGRANEFLVIAGLVYFTISFAASLLVKRLQKRFAV 221 Score = 43.5 bits (101), Expect = 0.064, Method: Compositional matrix adjust. Identities = 27/65 (41%), Positives = 40/65 (61%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151 G V T L G++ ++GT++ RLS+NKL+A + YV FR+IP L+VI + Y + Sbjct: 16 GMVMTLKLMAMGVVGGLLLGTVLALMRLSSNKLLANVAGAYVNYFRSIPLLLVITWFYLA 75 Query: 152 VLSVL 156 V VL Sbjct: 76 VPFVL 80 >gi|325273126|ref|ZP_08139423.1| polar amino acid ABC transporter inner membrane subunit [Pseudomonas sp. TJI-51] gi|324101731|gb|EGB99280.1| polar amino acid ABC transporter inner membrane subunit [Pseudomonas sp. TJI-51] Length = 229 Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 67/205 (32%), Positives = 110/205 (53%), Gaps = 17/205 (8%) Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240 LT++ A V +L I L + R SRH++ + A+P YI F G P LV + L Sbjct: 19 LTLELVAIAVVAGLILAIPLGI--ARSSRHWYVR---AVPFSYI--FFFRGTPLLVQLFL 71 Query: 241 KYQLHFDKPVLGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296 Y L QF+ + S + P F + ++ +TAA+IAEI+R L ++P+G+ Sbjct: 72 VYY------GLAQFDAVRSSALWPYLRDPFWCTVLTMTLHTAAYIAEILRGALQSIPKGE 125 Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356 +EAA ALG++ K ++LP+A R +P +++ + +LK S+LA V +L + TI Sbjct: 126 IEAARALGMSRGKTLFYIMLPRAARIGLPAYSNEVILMLKASALASTVTLLELTGMARTI 185 Query: 357 INQTGQAIEIILIWMFIYLSLSIMI 381 I +T +EI YL++S ++ Sbjct: 186 IARTYLPVEIFFAAGVFYLAISFLL 210 >gi|169668088|gb|ACA64430.1| amino acid ABC tansporter permease protein [Campylobacter fetus subsp. venerealis NCTC 10354] Length = 240 Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 57/152 (37%), Positives = 93/152 (61%), Gaps = 16/152 (10%) Query: 249 PVLGQ---FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305 PVL Q F F+ +T+S F + IAL ++A++AEIVRSG+ +V +GQMEAA A+GL Sbjct: 91 PVLLQLMIFAFVILATLSDNFYAAVIALGLNSSAYVAEIVRSGINSVDKGQMEAARAMGL 150 Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI- 364 ++ + R ++ PQA+++I+P L +++++L K +S+ +G DL T+ +++ QA Sbjct: 151 SYSVSMRQIIFPQAVKNILPALANEFISLFKETSVVGLIGIFDL-----TMQSKSLQATL 205 Query: 365 ---EIILIWMFIYLS----LSIMIALFMNRLN 389 E IL IY + S++ L NRLN Sbjct: 206 FSPEPILFAGVIYYANVKFFSLLAKLLENRLN 237 >gi|148379165|ref|YP_001253706.1| amino acid ABC transporter permease [Clostridium botulinum A str. ATCC 3502] gi|153932298|ref|YP_001383541.1| His/Glu/Gln/Arg/opine ABC transporter permease [Clostridium botulinum A str. ATCC 19397] gi|153936492|ref|YP_001387090.1| His/Glu/Gln/Arg/opine ABC transporter permease [Clostridium botulinum A str. Hall] gi|168178599|ref|ZP_02613263.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Clostridium botulinum NCTC 2916] gi|226948447|ref|YP_002803538.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Clostridium botulinum A2 str. Kyoto] gi|148288649|emb|CAL82730.1| putative cystine ABC transporter, permease protein [Clostridium botulinum A str. ATCC 3502] gi|152928342|gb|ABS33842.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Clostridium botulinum A str. ATCC 19397] gi|152932406|gb|ABS37905.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Clostridium botulinum A str. Hall] gi|182670787|gb|EDT82761.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Clostridium botulinum NCTC 2916] gi|226842057|gb|ACO84723.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Clostridium botulinum A2 str. Kyoto] gi|322805500|emb|CBZ03064.1| amino acid ABC transporter, permease protein [Clostridium botulinum H04402 065] Length = 222 Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 56/176 (31%), Positives = 100/176 (56%), Gaps = 15/176 (8%) Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235 L + +T+ + + + G++L++ R + K ++ +YIS F G P L Sbjct: 17 LKYAHITLSIAILSMIIAVLFGVILAVI-----RMYKVKVLHSISEIYISFFR--GTPIL 69 Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295 + + L Y G I P +M++ IALS +A++AEI+R ++++ +G Sbjct: 70 IQLFLFY--------YGLPQIIPAFKEIPAYMAVVIALSMNGSAYMAEIIRGAIMSIDKG 121 Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 QMEA+++LG+T +A + ++LPQA R IP L + +++LLK+SSLA VG A+++S Sbjct: 122 QMEASLSLGMTEFQAMKRIILPQAARIAIPSLGNSFIDLLKSSSLAFTVGVAEILS 177 >gi|207727926|ref|YP_002256320.1| glutamate/aspartate transmembrane protein [Ralstonia solanacearum MolK2] gi|206591168|emb|CAQ56780.1| glutamate/aspartate transmembrane protein [Ralstonia solanacearum MolK2] Length = 227 Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 44/125 (35%), Positives = 78/125 (62%) Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327 S +A + + AA+ +EI+R+G+ +V RGQM AA A+G+T+ +A RLV+LPQA R++IP L Sbjct: 101 SALVAFALFEAAYYSEIIRAGIQSVSRGQMFAAYAMGMTYGQAMRLVILPQAFRNMIPLL 160 Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387 +Q + L +++SL +D + I + G+ +E++L F+Y + ++ + R Sbjct: 161 LTQAIILFQDTSLVYVSALSDFFTQAYNIGERDGRIVELLLFAGFVYFVVCFGASVLVKR 220 Query: 388 LNAKI 392 L K+ Sbjct: 221 LQKKV 225 >gi|311280750|ref|YP_003942981.1| polar amino acid ABC transporter, inner membrane subunit [Enterobacter cloacae SCF1] gi|308749945|gb|ADO49697.1| polar amino acid ABC transporter, inner membrane subunit [Enterobacter cloacae SCF1] Length = 260 Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 65/185 (35%), Positives = 97/185 (52%), Gaps = 13/185 (7%) Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKY-------QLHFDKPVLG--QFNFIGGST--V 262 +TG AL ++S F P LV + Y L F V G +F+ + G+ + Sbjct: 53 RTGAALTACWVSIFR--NTPLLVQLLFWYFAAWNLLPLGFRDIVNGVYRFSVLPGNVWWL 110 Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322 +PEF+ L+ +T+AF+ E V +GL AVP GQ EAA A G + R +LLPQA+ + Sbjct: 111 TPEFLCSAWGLAAFTSAFLVEEVTAGLRAVPLGQYEAAQAQGFSAPALFRHILLPQALAN 170 Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382 P+ QYLNL+K SSLA +GFA+L I + A+E + +YL +++ Sbjct: 171 AWQPVVGQYLNLMKLSSLASGIGFAELTCQVRQIESYNAHALEAFALGTALYLLTGVLMG 230 Query: 383 LFMNR 387 L + R Sbjct: 231 LTLTR 235 >gi|300705159|ref|YP_003746762.1| glutamate/aspartate ABC transporter membrane component [Ralstonia solanacearum CFBP2957] gi|299072823|emb|CBJ44179.1| glutamate/aspartate transport protein; ABC superfamily, membrane component [Ralstonia solanacearum CFBP2957] Length = 227 Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 44/125 (35%), Positives = 78/125 (62%) Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327 S +A + + AA+ +EI+R+G+ +V RGQM AA A+G+T+ +A RLV+LPQA R++IP L Sbjct: 101 SALVAFALFEAAYYSEIIRAGIQSVSRGQMFAAYAMGMTYGQAMRLVILPQAFRNMIPLL 160 Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387 +Q + L +++SL +D + I + G+ +E++L F+Y + ++ + R Sbjct: 161 LTQAIILFQDTSLVYVSALSDFFTQAYNIGERDGRIVELLLFAGFVYFVVCFGASVLVKR 220 Query: 388 LNAKI 392 L K+ Sbjct: 221 LQKKV 225 >gi|148974813|ref|ZP_01811793.1| amino acid ABC transporter, permease protein [Vibrionales bacterium SWAT-3] gi|145965322|gb|EDK30571.1| amino acid ABC transporter, permease protein [Vibrionales bacterium SWAT-3] Length = 265 Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 69/209 (33%), Positives = 110/209 (52%), Gaps = 21/209 (10%) Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247 I + S V +V+ L T L R+ H G+ L Y+ LI P LV I Y L+F Sbjct: 69 NISLISLVATLVIGL-TTALLRNSHSVVGRTLATSYVE--LIRNTPLLVQI---YLLYFV 122 Query: 248 -KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306 PV+G F + +AL+ + A+ AEI R+GL ++ +GQ EAA +LGL+ Sbjct: 123 FGPVIGL----------DRFSTAVLALALFQGAYTAEIFRAGLNSISKGQFEAAQSLGLS 172 Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 V+LPQ ++ +PPLT++ ++L+KNSS+ + DL + I+++T EI Sbjct: 173 KTYTYWDVILPQVVQRTLPPLTNEVISLIKNSSIVSVMAIFDLTTEARNIVSETAMPFEI 232 Query: 367 ----ILIWMFIYLSLSIMIALFMNRLNAK 391 +I++ + LSLS + A ++L A Sbjct: 233 WFSVAIIYLALTLSLSAVAAWLEHKLGAN 261 >gi|163938565|ref|YP_001643449.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus weihenstephanensis KBAB4] gi|229131585|ref|ZP_04260468.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus BDRD-ST196] gi|163860762|gb|ABY41821.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus weihenstephanensis KBAB4] gi|228651876|gb|EEL07830.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus BDRD-ST196] Length = 214 Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 58/162 (35%), Positives = 90/162 (55%), Gaps = 37/162 (22%) Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247 KI V S VLGI++ + + LPLL I F F LP LK ++ Sbjct: 47 KIPVVSQVLGIIVEVI-------------RNLPLLLIIFFTYFALPEA---GLKLEI--- 87 Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307 ++ +AL+ + AA I+EIVRSGL+++ +GQ+EAA + GLT+ Sbjct: 88 ------------------ITAVIVALTIFEAAMISEIVRSGLLSIEKGQIEAARSSGLTY 129 Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349 +A ++LPQA+R ++PPL SQ+++LLK++SLAV + +L Sbjct: 130 VQALWHIILPQALRRMVPPLVSQFISLLKDTSLAVGISLPEL 171 Score = 38.5 bits (88), Expect = 2.0, Method: Compositional matrix adjust. Identities = 21/61 (34%), Positives = 37/61 (60%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G + T +A ++ + IIG+++G R +V+ + + VEV RN+P L++IFF Sbjct: 15 LLKGLLITLEVALVAIVLSFIIGSVIGILRYMKIPVVSQVLGIIVEVIRNLPLLLIIFFT 74 Query: 149 Y 149 Y Sbjct: 75 Y 75 >gi|298293508|ref|YP_003695447.1| polar amino acid ABC transporter inner membrane subunit [Starkeya novella DSM 506] gi|296930019|gb|ADH90828.1| polar amino acid ABC transporter, inner membrane subunit [Starkeya novella DSM 506] Length = 226 Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 60/203 (29%), Positives = 112/203 (55%), Gaps = 14/203 (6%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 + SF LG+ L F T L+R + + L Y+ ++I G P LV + + + + P Sbjct: 28 LLSFALGLTLG-FLTALARLYGPRPLAGLARFYV--WIIRGTPLLVQL---FVIFYGLPS 81 Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 +G + F + I + A+ +EIVR+ + ++P+GQ EA+ ++G++ +A Sbjct: 82 VG--------ILLDAFPAALIGFTLNVGAYSSEIVRAVIASIPKGQWEASYSIGMSWSQA 133 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370 R +LPQA R+ +PPL++ +++L+K++SLA AV +L I+ T + + I + Sbjct: 134 LRRTVLPQAARTAVPPLSNTFISLVKDTSLAAAVTVPELFQAAQRIVAVTYEPLIIYIEA 193 Query: 371 MFIYLSLSIMIALFMNRLNAKIA 393 IYL+LS +++ +RL ++A Sbjct: 194 ALIYLALSSVLSALQDRLEKRLA 216 >gi|283853863|ref|ZP_06371079.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio sp. FW1012B] gi|283570738|gb|EFC18782.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio sp. FW1012B] Length = 231 Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 67/201 (33%), Positives = 106/201 (52%), Gaps = 18/201 (8%) Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252 +F LG+ + LF R ++YI +I G P L+++ + +F PVL Sbjct: 40 AFWLGLGIGLFRISKLRRLRWPA-----MVYIE--IIRGTPLLMVV---FWFYFLAPVLL 89 Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312 G T+ PE S IAL +T+A+IAEIVR+G+ A+P+GQMEAA GL H + Sbjct: 90 ------GKTL-PEAQSALIALIVFTSAYIAEIVRAGVEALPKGQMEAARGTGLNHFQTMT 142 Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA-IEIILIWM 371 V+LPQA+ ++IP +Q+++L K++SLA +G +L + ++T A EI + Sbjct: 143 HVILPQALFNMIPSFVNQFVSLTKDTSLAFIIGVNELTKAATQVNSRTLTAPTEIFITIA 202 Query: 372 FIYLSLSIMIALFMNRLNAKI 392 +Y + + RL I Sbjct: 203 LLYFVICYCLTELSRRLEKHI 223 Score = 37.0 bits (84), Expect = 4.8, Method: Compositional matrix adjust. Identities = 21/60 (35%), Positives = 32/60 (53%) Query: 90 LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 L G T LA G+ A +G +G R+S + + W VY+E+ R P L+V+F+ Y Sbjct: 23 LGGLAMTVLLAVGGIFGAFWLGLGIGLFRISKLRRLRWPAMVYIEIIRGTPLLMVVFWFY 82 >gi|330877713|gb|EGH11862.1| glutamine ABC transporter permease [Pseudomonas syringae pv. morsprunorum str. M302280PT] gi|330965186|gb|EGH65446.1| glutamine ABC transporter permease [Pseudomonas syringae pv. actinidiae str. M302091] Length = 233 Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 56/148 (37%), Positives = 87/148 (58%), Gaps = 4/148 (2%) Query: 232 LPTLVLIALKYQLHFDKP-VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290 +PTLV + L Y F P +L + I S S E++ IAL AA+ +E +RSGL Sbjct: 69 VPTLVQLMLWY---FGIPTLLSESTQIWLSGYSTEYLFSVIALGLCQAAYFSEDIRSGLR 125 Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 A+P GQ+EA+ ALGL + ++ R V+LPQ +R+ +P L + + L KN+SL +A+G +L Sbjct: 126 AIPAGQVEASRALGLGYVRSMRYVILPQGVRNCLPSLINHTVLLFKNTSLVMAIGVVELT 185 Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLS 378 + N T + E L+ +YL++S Sbjct: 186 YATREVENYTFRTFEAYLVATVVYLAIS 213 >gi|222099044|ref|YP_002533612.1| Amino acid ABC transporter, permease protein [Thermotoga neapolitana DSM 4359] gi|221571434|gb|ACM22246.1| Amino acid ABC transporter, permease protein [Thermotoga neapolitana DSM 4359] Length = 216 Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 59/166 (35%), Positives = 95/166 (57%), Gaps = 17/166 (10%) Query: 229 IFGLPTLVLIALKYQLHFDKPVLG-QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287 I G P +V + L Y F P LG +F+ F + +AL + A++AEIVR+ Sbjct: 62 IRGTPLMVQLFLVY---FGLPELGLEFD---------RFTAAVVALGINSGAYVAEIVRA 109 Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347 G+ +VP+GQ EAA +LG++H +A V+LPQA R I+P L ++++ L K+SSLA+ +G Sbjct: 110 GIQSVPKGQYEAARSLGMSHFQAMVHVILPQAFRHILPALGNEFIALAKDSSLAMVIGTV 169 Query: 348 DLVSVGGTIINQTGQAIEI----ILIWMFIYLSLSIMIALFMNRLN 389 +L+ I+++T + I LI+ I S+S ++ RL Sbjct: 170 ELMRSAQYIVSRTFMSFPIYGGVALIYFAITFSVSRLVRFVEGRLK 215 Score = 37.7 bits (86), Expect = 3.5, Method: Compositional matrix adjust. Identities = 21/61 (34%), Positives = 32/61 (52%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G + T L ++ IG VG GRLS +++ + VYVE R P +V +F + Sbjct: 15 LLKGALRTLQLTSLAVLIGLAIGIFVGMGRLSKYRIIRYPSSVYVEFIRGTPLMVQLFLV 74 Query: 149 Y 149 Y Sbjct: 75 Y 75 >gi|226327563|ref|ZP_03803081.1| hypothetical protein PROPEN_01434 [Proteus penneri ATCC 35198] gi|225204089|gb|EEG86443.1| hypothetical protein PROPEN_01434 [Proteus penneri ATCC 35198] Length = 206 Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 42/85 (49%), Positives = 62/85 (72%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 EF++ + L+ Y+ FIAE +R+G+ V +GQ AA+ALGLT ++ R V+LPQA R + Sbjct: 74 EFLAGIVGLTFYSTPFIAEELRAGIQGVKQGQKYAALALGLTPWQSMRYVILPQAFRIAL 133 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADL 349 PPL QY+N++KNSSL +A+G A+L Sbjct: 134 PPLLGQYMNVIKNSSLTMAIGVAEL 158 >gi|256851551|ref|ZP_05556940.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Lactobacillus jensenii 27-2-CHN] gi|260660974|ref|ZP_05861889.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Lactobacillus jensenii 115-3-CHN] gi|282932630|ref|ZP_06338046.1| probable amino-acid ABC transporter permease protein [Lactobacillus jensenii 208-1] gi|297206366|ref|ZP_06923761.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus jensenii JV-V16] gi|256616613|gb|EEU21801.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Lactobacillus jensenii 27-2-CHN] gi|260548696|gb|EEX24671.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Lactobacillus jensenii 115-3-CHN] gi|281303262|gb|EFA95448.1| probable amino-acid ABC transporter permease protein [Lactobacillus jensenii 208-1] gi|297149492|gb|EFH29790.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus jensenii JV-V16] Length = 220 Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 70/223 (31%), Positives = 111/223 (49%), Gaps = 32/223 (14%) Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPT 234 +T++ + V S+++G++L ++ G + LPLL I F FG P Sbjct: 22 VTVEVSIISIVLSYIIGLILGTIRYMKIKYVSAIVGVIIDIIRNLPLLLIIFFTYFGFPE 81 Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294 L G SP F + AL + +A +AEIVR G+ AVP Sbjct: 82 L-----------------------GIHASP-FWAAISALVIFESAMLAEIVRGGIQAVPD 117 Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354 GQME A + G+T+ +A R V++PQAM ++P L SQ+++L+K++SLA + +L+ Sbjct: 118 GQMEGARSNGMTYLQAMRYVIMPQAMHMMMPALLSQFVSLVKDTSLATIIILPELLYHAQ 177 Query: 355 TIINQ-TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 I +Q T I + LI +Y + ++LF RL K+ KE Sbjct: 178 IIYSQNTTYMIPMYLIIAAMYFVVCFALSLFAQRLRKKLG-KE 219 >gi|188532630|ref|YP_001906427.1| GltJ protein [Erwinia tasmaniensis Et1/99] gi|188027672|emb|CAO95523.1| GltJ protein [Erwinia tasmaniensis Et1/99] Length = 255 Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 45/106 (42%), Positives = 66/106 (62%) Query: 260 STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319 S ++PEF+ + L +TAAF+ E V++GL +VP+GQ EAAI+ G + R +LLPQA Sbjct: 108 SWLTPEFLCVVWGLGLFTAAFLVEEVQAGLNSVPKGQREAAISQGFSRWTLLREILLPQA 167 Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365 + + P+ QYLNL+K SSLA +GF++L I + A E Sbjct: 168 LTNAWQPVAGQYLNLMKLSSLATGIGFSELTYQVSRIESYNAHAFE 213 Score = 37.4 bits (85), Expect = 4.5, Method: Compositional matrix adjust. Identities = 22/69 (31%), Positives = 39/69 (56%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 I+ GF+ TF+++ + +T++ L+ A RLS +++ +V +FRN P LV + F Sbjct: 19 IISGFLTTFYVSLIASLFSTLLVVLLLAMRLSPSRIAQGAVSAFVSLFRNTPLLVQLLFW 78 Query: 149 YKSVLSVLP 157 Y + LP Sbjct: 79 YFAAWGALP 87 >gi|209966387|ref|YP_002299302.1| general L-amino acid transport system permease protein AapM [Rhodospirillum centenum SW] gi|209959853|gb|ACJ00490.1| general L-amino acid transport system permease protein AapM [Rhodospirillum centenum SW] Length = 365 Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 42/101 (41%), Positives = 67/101 (66%), Gaps = 1/101 (0%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G TV + + + L + AA++AE+VR GL A+P+GQ EAA ALGL++ + TRL++LPQ Sbjct: 224 GVTVD-KLLRAQVGLILFAAAYLAEVVRGGLQAIPKGQYEAAAALGLSYWQRTRLIILPQ 282 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359 A+ +IPPL + ++ K++SL + +G DL+S T + Sbjct: 283 ALGLVIPPLVNTFIGFFKDTSLVIIIGLMDLLSTAKTALTD 323 >gi|301066392|ref|YP_003788415.1| amino acid ABC transporter permease/periplasmic protein [Lactobacillus casei str. Zhang] gi|300438799|gb|ADK18565.1| ABC-type amino acid transport system, permease and periplasmic component [Lactobacillus casei str. Zhang] Length = 485 Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 46/130 (35%), Positives = 83/130 (63%), Gaps = 4/130 (3%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P ++ IA+S +AA++AEI+RSG+ ++P GQ EAA +LGL+ R+ V+LPQA+++I Sbjct: 353 PALIAGLIAVSLNSAAYVAEIIRSGIDSIPVGQTEAARSLGLSERQTMISVVLPQAIKNI 412 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY----LSLSI 379 P L +++++L+K SS+ +G DL+ + T + ++ IL+ M +Y LS Sbjct: 413 WPALGNEFISLIKESSIVSIIGVTDLIYQLTVVQTATYKGVQPILVAMVLYFVLTFGLSK 472 Query: 380 MIALFMNRLN 389 +++ F ++N Sbjct: 473 LLSHFERKMN 482 >gi|271500710|ref|YP_003333735.1| polar amino acid ABC transporter inner membrane subunit [Dickeya dadantii Ech586] gi|270344265|gb|ACZ77030.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya dadantii Ech586] Length = 214 Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 43/126 (34%), Positives = 78/126 (61%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + + LS Y A+IAE+ R+G+ AVP+GQ E + LGL+ R+ V+LPQ ++P Sbjct: 85 FAAGILGLSIYQGAYIAEVFRAGIEAVPKGQWEVSWILGLSKRQTFLSVILPQTRGIVLP 144 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PLT QYL+L+K++S+ +G ++L+ G I+++ GQ + I + +Y ++ ++ ++ Sbjct: 145 PLTGQYLSLIKDTSIVSMIGMSELMHQGQAIVDRIGQPVIIYGLVALLYFAVCFPLSRWV 204 Query: 386 NRLNAK 391 A+ Sbjct: 205 QHHQAR 210 >gi|253689718|ref|YP_003018908.1| polar amino acid ABC transporter, inner membrane subunit [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251756296|gb|ACT14372.1| polar amino acid ABC transporter, inner membrane subunit [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 254 Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 41/133 (30%), Positives = 79/133 (59%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+S +A++ A+++EI R+G+ ++ RGQMEA+ +LG+++ + R V+LPQA R ++P Sbjct: 122 FLSCIVAITLNAGAYVSEIFRAGIQSIDRGQMEASRSLGMSYGRTMRKVILPQAFRRMLP 181 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PL + + ++K+SSLA A+G ADL T+ E L +Y ++ +++L + Sbjct: 182 PLGNNAIAIVKDSSLASAIGLADLAYAARTVSGAYATYWEPYLAISIVYWVITFLLSLLV 241 Query: 386 NRLNAKIALKEKK 398 + + + + Sbjct: 242 RHMETRFGKSDSR 254 >gi|225075407|ref|ZP_03718606.1| hypothetical protein NEIFLAOT_00412 [Neisseria flavescens NRL30031/H210] gi|224953225|gb|EEG34434.1| hypothetical protein NEIFLAOT_00412 [Neisseria flavescens NRL30031/H210] Length = 248 Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 47/126 (37%), Positives = 76/126 (60%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +AL + A++ EI R+G+ ++ +GQMEAA +LGLT+ +A R V+LPQA+R ++PPL + Sbjct: 122 MALIANSGAYVCEIFRAGIQSIDKGQMEAARSLGLTYTQAMRYVILPQALRRMLPPLAGE 181 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++ LLK+SSL + +L+SV I Q E + IYL L+ ++ RL Sbjct: 182 FITLLKDSSLLSVIAVPELMSVQKAITGQYSIFQEPLYTVALIYLVLTSVLGWVFLRLER 241 Query: 391 KIALKE 396 + +K Sbjct: 242 RYNVKH 247 >gi|159029917|emb|CAO90296.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 503 Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 55/159 (34%), Positives = 88/159 (55%), Gaps = 5/159 (3%) Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290 G P LV + L Y F P G F IG + + ALS AA++AEI+R G+ Sbjct: 335 GTPMLVQLFLIY---FGLP--GLFREIGLNIDLDRLPAALFALSLNVAAYLAEIMRGGIQ 389 Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 ++ GQ EA +LG++ + V+ PQA R ++PPL ++++ L+K++SLA +GF +L Sbjct: 390 SIDNGQWEACSSLGMSPVQTMHEVIFPQAFRRMLPPLGNEFITLIKDTSLAAVIGFEELF 449 Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 G ++ T +A EI + +YL L+ + +L RL Sbjct: 450 RQGQLMVATTYKAFEIYIAVALVYLVLTTLSSLVFKRLE 488 Score = 38.1 bits (87), Expect = 2.5, Method: Compositional matrix adjust. Identities = 19/41 (46%), Positives = 25/41 (60%) Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 I GTLV +S K + ICR+YV+ FR P LV +F +Y Sbjct: 306 IGGTLVAIALISPYKWLKIICRIYVDFFRGTPMLVQLFLIY 346 >gi|191638338|ref|YP_001987504.1| Glutamine ABC transporter, substrate binding and permease protein [Lactobacillus casei BL23] gi|227535173|ref|ZP_03965222.1| glutamine ABC superfamily ATP binding cassette transporter, substrate binding and permease protein [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|239631577|ref|ZP_04674608.1| ABC-type amino acid transport system protein [Lactobacillus paracasei subsp. paracasei 8700:2] gi|190712640|emb|CAQ66646.1| Glutamine ABC transporter, substrate binding and permease protein [Lactobacillus casei BL23] gi|227187218|gb|EEI67285.1| glutamine ABC superfamily ATP binding cassette transporter, substrate binding and permease protein [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|239526042|gb|EEQ65043.1| ABC-type amino acid transport system protein [Lactobacillus paracasei subsp. paracasei 8700:2] gi|327382365|gb|AEA53841.1| Amino acid ABC transporter, amino acid-binding/permease protein [Lactobacillus casei LC2W] gi|327385566|gb|AEA57040.1| Amino acid ABC transporter, amino acid-binding/permease protein [Lactobacillus casei BD-II] Length = 485 Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 46/130 (35%), Positives = 83/130 (63%), Gaps = 4/130 (3%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P ++ IA+S +AA++AEI+RSG+ ++P GQ EAA +LGL+ R+ V+LPQA+++I Sbjct: 353 PALIAGLIAVSLNSAAYVAEIIRSGIDSIPVGQTEAARSLGLSERQTMISVVLPQAIKNI 412 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY----LSLSI 379 P L +++++L+K SS+ +G DL+ + T + ++ IL+ M +Y LS Sbjct: 413 WPALGNEFISLIKESSIVSIIGVTDLIYQLTVVQTATYKGVQPILVAMVLYFVLTFGLSK 472 Query: 380 MIALFMNRLN 389 +++ F ++N Sbjct: 473 LLSHFERKMN 482 >gi|312879705|ref|ZP_07739505.1| amino acid ABC transporter membrane protein, PAAT family ;amino acid ABC transporter substrate-binding protein, PAAT family [Aminomonas paucivorans DSM 12260] gi|310782996|gb|EFQ23394.1| amino acid ABC transporter membrane protein, PAAT family ;amino acid ABC transporter substrate-binding protein, PAAT family [Aminomonas paucivorans DSM 12260] Length = 512 Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 65/180 (36%), Positives = 95/180 (52%), Gaps = 26/180 (14%) Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240 +T+ + + + LG +L++ R F K AL + YI I G P L+ Sbjct: 299 VTLKVSVTAMLLAMALGFLLAVI-----RVFGPKWASALAVAYIEA--IRGTPVLI---- 347 Query: 241 KYQLHFDKPVLGQFNFIG----GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296 QL F F G G +SP F++ + L AA+ AE R+GL+AVPRGQ Sbjct: 348 --QLFF--------IFYGLPNVGIKLSP-FLAGALGLGLNYAAYEAENYRAGLLAVPRGQ 396 Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356 MEAA+ L +T +A R V++PQA R +IPP+T+ +++LLK+SSL + DL G I Sbjct: 397 MEAALGLSMTRWQALRHVVIPQAFRVVIPPVTNDFISLLKDSSLVSIITMVDLTKAYGQI 456 >gi|218233063|ref|YP_002365438.1| amino acid ABC transporter, permease protein [Bacillus cereus B4264] gi|229171425|ref|ZP_04299010.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus MM3] gi|218161020|gb|ACK61012.1| amino acid ABC transporter, permease protein [Bacillus cereus B4264] gi|228612129|gb|EEK69366.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus MM3] Length = 214 Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 60/172 (34%), Positives = 93/172 (54%), Gaps = 37/172 (21%) Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247 KI V S +LGIV+ + + LPLL I F F LP LK ++ Sbjct: 47 KIPVVSQILGIVVEVI-------------RNLPLLLIIFFTYFALPEA---GLKLEI--- 87 Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307 ++ +AL+ + AA I+EIVRSGL+++ +GQ+EAA + GLT+ Sbjct: 88 ------------------ITAVIVALTIFEAAMISEIVRSGLLSIEKGQIEAARSSGLTY 129 Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359 +A ++LPQA+R ++PPL SQ+++LLK++SLAV + +L+ I Q Sbjct: 130 VQALWHIILPQALRRMVPPLVSQFISLLKDTSLAVVISLPELMHNAQIISGQ 181 Score = 40.0 bits (92), Expect = 0.72, Method: Compositional matrix adjust. Identities = 23/61 (37%), Positives = 37/61 (60%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G + T +A +I + IIG+++G R +V+ I + VEV RN+P L++IFF Sbjct: 15 LLKGLLITLEVALVAIILSFIIGSVIGILRYMKIPVVSQILGIVVEVIRNLPLLLIIFFT 74 Query: 149 Y 149 Y Sbjct: 75 Y 75 >gi|296103389|ref|YP_003613535.1| glutamate/aspartate transport system permease protein [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295057848|gb|ADF62586.1| glutamate/aspartate transport system permease protein [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 224 Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 42/127 (33%), Positives = 79/127 (62%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 +S +A S + AA+ +EI+R+G+ ++ RGQ AA+ALG+TH ++ +L++LPQA R+++ Sbjct: 96 RLISAMVAFSMFEAAYYSEIIRAGIQSISRGQSSAALALGMTHWQSMQLIILPQAFRAMV 155 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 P L +Q + L +++SL + AD TI + G +E++L +Y +S+ +L Sbjct: 156 PLLLTQGIVLFQDTSLVYVLSLADFFRTASTIGERDGTQVEMVLFAGAVYFVISLSASLL 215 Query: 385 MNRLNAK 391 ++ L + Sbjct: 216 VSWLKKR 222 Score = 41.2 bits (95), Expect = 0.31, Method: Compositional matrix adjust. Identities = 31/92 (33%), Positives = 48/92 (52%), Gaps = 10/92 (10%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G V T + +I + GTL+ RLS+ K +AW YV VFR+IP ++V+ + Sbjct: 16 LLDGLVITLKITAIAIIVGIVWGTLLAVMRLSSFKPLAWFATAYVNVFRSIPLVMVLLWF 75 Query: 149 Y-------KSVLSVLPIPD---HSIVLPFGMF 170 Y ++VL + P D S ++ F MF Sbjct: 76 YLIVPGFLQNVLGLSPKTDIRLISAMVAFSMF 107 >gi|42779788|ref|NP_977035.1| amino acid ABC transporter, permease protein [Bacillus cereus ATCC 10987] gi|42735705|gb|AAS39643.1| amino acid ABC transporter, permease protein [Bacillus cereus ATCC 10987] Length = 214 Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 41/89 (46%), Positives = 66/89 (74%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +AL+ + AA I+EIVRSGL+++ +GQ+EAA + GLT+ +A V+LPQA+R ++PPL SQ Sbjct: 93 VALTIFEAAMISEIVRSGLLSIEKGQIEAARSSGLTYVQALWHVILPQALRRMVPPLVSQ 152 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQ 359 +++LLK+++LAV + +L+ I Q Sbjct: 153 FISLLKDTALAVVISLPELIHNAQIISGQ 181 Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust. Identities = 22/61 (36%), Positives = 37/61 (60%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G + T +A ++ + IIG+++G R +V+ I + VEV RN+P L++IFF Sbjct: 15 LLKGLLITLEVALVAIVLSFIIGSVIGILRYMKIPVVSQILGILVEVVRNLPLLLIIFFT 74 Query: 149 Y 149 Y Sbjct: 75 Y 75 >gi|256965481|ref|ZP_05569652.1| polar amino acid ABC uptake transporter membrane-spanning protein [Enterococcus faecalis HIP11704] gi|257415732|ref|ZP_05592726.1| polar amino acid ABC uptake transporter membrane-spanning protein [Enterococcus faecalis AR01/DG] gi|307273809|ref|ZP_07555031.1| ABC transporter, permease protein [Enterococcus faecalis TX0855] gi|256955977|gb|EEU72609.1| polar amino acid ABC uptake transporter membrane-spanning protein [Enterococcus faecalis HIP11704] gi|257157560|gb|EEU87520.1| polar amino acid ABC uptake transporter membrane-spanning protein [Enterococcus faecalis ARO1/DG] gi|306509494|gb|EFM78542.1| ABC transporter, permease protein [Enterococcus faecalis TX0855] gi|315174637|gb|EFU18654.1| ABC transporter, permease protein [Enterococcus faecalis TX1346] Length = 237 Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 60/159 (37%), Positives = 88/159 (55%), Gaps = 11/159 (6%) Query: 247 DKPVLGQF--NFIGGSTVSP--EFMSLYIALSC---YTAAFIAEIVRSGLIAVPRGQMEA 299 + P+L QF + G +SP F IA+ C Y A+I+E+VRSG+ AVPRGQ EA Sbjct: 79 NTPLLIQFIVVYYGFPLLSPLLSFSITTIAILCVGFYHGAYISEVVRSGIGAVPRGQFEA 138 Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359 A + GLT+ + R V+LPQA R ++PPLT+Q +NL+KN+S + AD++ + + Sbjct: 139 AYSQGLTYGQTMRYVILPQAWRIMLPPLTNQVVNLIKNTSTVAIISGADVMFAANSWSSV 198 Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 I + F+Y L +A L K+ K KK Sbjct: 199 NLNYIPAFALAGFLYFILCFPLA----NLARKMEEKNKK 233 >gi|163791315|ref|ZP_02185728.1| Putative amino acid ABC transporter, substrate binding/permease subunit [Carnobacterium sp. AT7] gi|159873394|gb|EDP67485.1| Putative amino acid ABC transporter, substrate binding/permease subunit [Carnobacterium sp. AT7] Length = 493 Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 44/129 (34%), Positives = 80/129 (62%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P S IA+S +AA+I EI+RSGL +VP+GQ EAA +LG++ + A R ++ PQA+++I Sbjct: 362 PALASGIIAVSLNSAAYICEIIRSGLNSVPKGQSEAARSLGMSKKIAMRQIIFPQALKNI 421 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 P L ++++ ++K SS+ +G +DL+ + + + + I +++ M IY L+ + Sbjct: 422 WPALGNEFITVIKESSIVSIIGVSDLIFQTRVVTSVSYRGIAPLVVTMIIYFILTFSLTK 481 Query: 384 FMNRLNAKI 392 +N K+ Sbjct: 482 LLNHYEGKM 490 Score = 37.4 bits (85), Expect = 4.0, Method: Compositional matrix adjust. Identities = 21/71 (29%), Positives = 39/71 (54%), Gaps = 8/71 (11%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 IL+ V+ F+ +I+G ++ R+S NK+V ++ YVE R P ++ + F+ Sbjct: 300 ILISVVSVFF--------GSILGVVLSFMRMSKNKIVHFVATAYVEFVRGTPMMIQVMFI 351 Query: 149 YKSVLSVLPIP 159 Y +V ++ IP Sbjct: 352 YFAVGYLVNIP 362 >gi|300311602|ref|YP_003775694.1| glutamine ABC transporter permease [Herbaspirillum seropedicae SmR1] gi|300074387|gb|ADJ63786.1| ABC-type glutamine transport system, permease component protein [Herbaspirillum seropedicae SmR1] Length = 221 Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 43/102 (42%), Positives = 69/102 (67%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P ++ + L Y+ A+++EIVR + ++ RGQMEAA +LGL +R A R V+LPQA + Sbjct: 87 PAYVCGILGLGIYSGAYVSEIVRGAIQSIERGQMEAARSLGLPYRMAMRRVILPQAFVRM 146 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365 IPPL ++++ L+KNS+L + ADL+ G II+ T +++E Sbjct: 147 IPPLGNEFIALIKNSALVSLLTIADLMHEGEKIISVTYRSLE 188 >gi|300722325|ref|YP_003711610.1| glutamate/aspartate ABC transporter membrane protein [Xenorhabdus nematophila ATCC 19061] gi|297628827|emb|CBJ89405.1| glutamate/aspartate transport protein (ABC superfamily, membrane) [Xenorhabdus nematophila ATCC 19061] Length = 224 Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 46/134 (34%), Positives = 79/134 (58%), Gaps = 4/134 (2%) Query: 262 VSPE----FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317 +SP+ +S +A S + AA+ +EI+R+G+ +V RGQ A++ALG+TH ++ RLV+LP Sbjct: 89 ISPQTDIRLISAMVAFSLFEAAYYSEIIRAGIQSVSRGQSSASLALGMTHMQSMRLVILP 148 Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377 QA R++ P L +Q + L +++SL + AD I + G +E+IL +Y Sbjct: 149 QAFRAMTPLLLTQGIVLFQDTSLVYVLSLADFFRTATNIGERDGTQVEMILFAGAVYFVF 208 Query: 378 SIMIALFMNRLNAK 391 S ++ +N L + Sbjct: 209 SFAASMLVNYLKKR 222 Score = 40.0 bits (92), Expect = 0.66, Method: Compositional matrix adjust. Identities = 25/79 (31%), Positives = 44/79 (55%), Gaps = 7/79 (8%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G V T + +I I GT++ RLS+ K+V+W +YV +FR++P ++V+ + Sbjct: 16 LLNGLVITLKITGIAVIVGIIWGTVLAMMRLSSIKVVSWFATLYVNLFRSVPLVMVLLWF 75 Query: 149 Y-------KSVLSVLPIPD 160 Y ++VL + P D Sbjct: 76 YLIVPNLLQNVLGISPQTD 94 >gi|294631351|ref|ZP_06709911.1| arginine/ornithine transporter [Streptomyces sp. e14] gi|292834684|gb|EFF93033.1| arginine/ornithine transporter [Streptomyces sp. e14] Length = 313 Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 45/117 (38%), Positives = 71/117 (60%), Gaps = 3/117 (2%) Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 AA++AEI R+GL+AV GQ EAA ALG++H K R +++PQAMR I+PP ++ +N+LK Sbjct: 167 AAYMAEICRAGLLAVDEGQTEAAHALGMSHGKTLRRIIIPQAMRVIVPPTGNEVINMLKT 226 Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILI---WMFIYLSLSIMIALFMNRLNAK 391 +SL AV + +L I +G +E+ + W I S+ + ++ R A+ Sbjct: 227 TSLVAAVQYPELFRFAQDIGTVSGAPVEMYFLAAAWYLILTSVLSVGQYYLERYYAR 283 >gi|269127883|ref|YP_003301253.1| polar amino acid ABC transporter inner membrane subunit [Thermomonospora curvata DSM 43183] gi|268312841|gb|ACY99215.1| polar amino acid ABC transporter, inner membrane subunit [Thermomonospora curvata DSM 43183] Length = 303 Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 45/104 (43%), Positives = 71/104 (68%) Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 AA++AEIVR+G+++V GQ EAA ALG++ + R ++LPQAMR I+PP ++ +++LKN Sbjct: 166 AAYMAEIVRAGILSVDPGQQEAASALGMSRMQTMRRIVLPQAMRVIVPPTGNETISMLKN 225 Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 +SL AV +A+L TI T Q I ++++ YL LS ++ Sbjct: 226 TSLVAAVPYAELTFTAQTIYASTYQIIPMLIMACLWYLFLSTLL 269 >gi|330005623|ref|ZP_08305301.1| ABC transporter, permease protein [Klebsiella sp. MS 92-3] gi|328536189|gb|EGF62570.1| ABC transporter, permease protein [Klebsiella sp. MS 92-3] Length = 253 Score = 86.7 bits (213), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 54/173 (31%), Positives = 94/173 (54%), Gaps = 11/173 (6%) Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286 +L+ G+P ++++ Y F P+L N G F ++ L Y + +IAEIVR Sbjct: 69 YLLRGIPLMMVVFWTY---FCVPLLIGHNISG-------FSTMLCTLVIYESTYIAEIVR 118 Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346 G+ A+P GQ EA+ ALG+ H +A RLV+LPQA+ + +P L SQ ++++K+S+L + Sbjct: 119 GGIQALPSGQYEASRALGMGHVRALRLVILPQALYNALPSLVSQLVSIIKDSTLGYVINV 178 Query: 347 ADLVSVGGTIINQ-TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 +L + NQ + ++ I Y ++ + NRL +IA + ++ Sbjct: 179 PELTYAANQVSNQLLTKPFQVFAIVALSYYIINFSLTWLANRLELRIASRRQR 231 >gi|306843054|ref|ZP_07475678.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Brucella sp. BO2] gi|306286768|gb|EFM58316.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Brucella sp. BO2] Length = 323 Score = 86.7 bits (213), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 50/128 (39%), Positives = 74/128 (57%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +ALS A++ EI R+G+ ++P GQ EAA ALGL + LV+LPQAMR IIPP +Q Sbjct: 196 LALSLCYGAYMTEIFRAGIESIPHGQKEAATALGLGSAQTMWLVILPQAMRIIIPPTGNQ 255 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++ +LK+SSL +G +L+ V T + IE+++ IY LSI +R+ Sbjct: 256 FIAMLKDSSLVSVIGVWELMYVARTQGQTEFRHIEMLITASMIYWILSISFEFIQSRIER 315 Query: 391 KIALKEKK 398 A K+ Sbjct: 316 YYARYNKR 323 >gi|317048575|ref|YP_004116223.1| polar amino acid ABC transporter inner membrane subunit [Pantoea sp. At-9b] gi|316950192|gb|ADU69667.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea sp. At-9b] Length = 222 Score = 86.7 bits (213), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 68/207 (32%), Positives = 111/207 (53%), Gaps = 18/207 (8%) Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251 F +LG VL+L RLS HF L Y+S F G P LIA + +++ P Sbjct: 32 FGLILGFVLALM--RLS-HFWPVNW--LARFYVSIFR--GTP---LIAQLFMIYYGLP-- 79 Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311 QF G + P S I LS TAA+ +E +R + A+ RGQ EAA ++G+T + Sbjct: 80 -QF----GIELDP-IPSAMIGLSLNTAAYASESLRGAIAAIERGQWEAAASIGMTPWQTL 133 Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371 R V+LPQA R+ +PPL + +++L+K++SLA + +L I ++T + + L Sbjct: 134 RRVILPQAARTALPPLGNSFISLVKDTSLAATIQVPELFRQAQLITSRTLEVFTMYLAAS 193 Query: 372 FIYLSLSIMIALFMNRLNAKIALKEKK 398 IY ++ +++ NRL A + ++++ Sbjct: 194 VIYWVMATVLSALQNRLEAHVNRQDRE 220 Score = 38.9 bits (89), Expect = 1.6, Method: Compositional matrix adjust. Identities = 29/89 (32%), Positives = 43/89 (48%), Gaps = 8/89 (8%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G V T L+ GM I+G ++ RLS V W+ R YV +FR P + +F + Sbjct: 15 LLKGAVFTLQLSIGGMFFGLILGFVLALMRLSHFWPVNWLARFYVSIFRGTPLIAQLFMI 74 Query: 149 YKSV----LSVLPIPDHSIVLPFGMFLNN 173 Y + + + PIP I G+ LN Sbjct: 75 YYGLPQFGIELDPIPSAMI----GLSLNT 99 >gi|319778957|ref|YP_004129870.1| Glutamate Aspartate transport system permease protein GltK [Taylorella equigenitalis MCE9] gi|317108981|gb|ADU91727.1| Glutamate Aspartate transport system permease protein GltK [Taylorella equigenitalis MCE9] Length = 356 Score = 86.7 bits (213), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 64/211 (30%), Positives = 111/211 (52%), Gaps = 18/211 (8%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 +F+ LGI+L+L R H +AL YI L+ G+P + L+ F V Sbjct: 161 MFATPLGIILAL-----GRRSHMPLIRALSTSYIE--LVRGVPFVSLL-------FMASV 206 Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 + F G T + + + +A+ Y +A+IAE+VR GL ++P+GQ E A +LGL++ + Sbjct: 207 MVPLFFPEGVTFN-KLLRAQLAVIIYMSAYIAEVVRGGLQSIPKGQYEGAKSLGLSYWQY 265 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL---VSVGGTIINQTGQAIEII 367 RL++LPQA+ +IPPL S ++++ K++SL V +G DL V + +G +E Sbjct: 266 MRLIILPQALTVVIPPLVSIFISIFKDTSLVVIIGIYDLTLSAKVALSDPQWSGLGLEAY 325 Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 + FIY ++ + + A++ + Sbjct: 326 VFLAFIYFIFCFAMSKYSRYIEARLRTGHRH 356 >gi|118474738|ref|YP_892387.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Campylobacter fetus subsp. fetus 82-40] gi|118413964|gb|ABK82384.1| amino acid ABC tansporter, permease protein, His/Glu/Gln/Arg/opine family [Campylobacter fetus subsp. fetus 82-40] Length = 239 Score = 86.7 bits (213), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 57/152 (37%), Positives = 93/152 (61%), Gaps = 16/152 (10%) Query: 249 PVLGQ---FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305 PVL Q F F+ +T+S F + IAL ++A++AEIVRSG+ +V +GQMEAA A+GL Sbjct: 90 PVLLQLMIFAFVILATLSDNFYAAVIALGLNSSAYVAEIVRSGINSVDKGQMEAARAMGL 149 Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI- 364 ++ + R ++ PQA+++I+P L +++++L K +S+ +G DL T+ +++ QA Sbjct: 150 SYSVSMRQIIFPQAVKNILPALANEFISLFKETSVVGLIGIFDL-----TMQSKSLQATL 204 Query: 365 ---EIILIWMFIYLS----LSIMIALFMNRLN 389 E IL IY + S++ L NRLN Sbjct: 205 FSPEPILFAGVIYYANVKFFSLLAKLLENRLN 236 >gi|226942878|ref|YP_002797951.1| amino acid ABC transporter permease [Azotobacter vinelandii DJ] gi|226717805|gb|ACO76976.1| amino acid ABC transporter, permease protein [Azotobacter vinelandii DJ] Length = 221 Score = 86.7 bits (213), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 54/176 (30%), Positives = 91/176 (51%), Gaps = 17/176 (9%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 +++PLL + + F +P L++ D PV F S +A + Sbjct: 61 RSIPLLLVIIWFYFAVP----FVLRWITGEDTPV-------------GAFASCLVAFVMF 103 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 AAF EIVR+G+ ++P GQM AA ALG+T+ ++ RLV+LPQA R + P L Q + L + Sbjct: 104 EAAFYCEIVRAGIQSIPHGQMSAAQALGMTYGQSMRLVILPQAFRKMTPLLLQQSIILFQ 163 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 ++SL +VG D ++ + + GQ E ++ +Y +S + + RL ++ Sbjct: 164 DTSLVYSVGLMDFLNAARSHGDIIGQPHEFLIFAGLVYFVVSFAASQLVKRLQKRL 219 Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust. Identities = 23/50 (46%), Positives = 32/50 (64%) Query: 107 ATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVL 156 + ++GTL+ RLS N L+A I YV FR+IP L+VI + Y +V VL Sbjct: 31 SVLLGTLLAILRLSHNPLLAGIASAYVNYFRSIPLLLVIIWFYFAVPFVL 80 >gi|306846379|ref|ZP_07478926.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Brucella sp. BO1] gi|306273164|gb|EFM55064.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Brucella sp. BO1] Length = 323 Score = 86.7 bits (213), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 50/128 (39%), Positives = 74/128 (57%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +ALS A++ EI R+G+ ++P GQ EAA ALGL + LV+LPQAMR IIPP +Q Sbjct: 196 LALSLCYGAYMTEIFRAGIESIPHGQKEAATALGLGSAQTMWLVILPQAMRIIIPPTGNQ 255 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++ +LK+SSL +G +L+ V T + IE+++ IY LSI +R+ Sbjct: 256 FIAMLKDSSLVSVIGVWELMYVARTQGQTEFRHIEMLITASMIYWILSISFEFIQSRIER 315 Query: 391 KIALKEKK 398 A K+ Sbjct: 316 YYARYNKR 323 >gi|260462684|ref|ZP_05810890.1| polar amino acid ABC transporter, inner membrane subunit [Mesorhizobium opportunistum WSM2075] gi|259031590|gb|EEW32860.1| polar amino acid ABC transporter, inner membrane subunit [Mesorhizobium opportunistum WSM2075] Length = 314 Score = 86.7 bits (213), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 56/158 (35%), Positives = 88/158 (55%), Gaps = 8/158 (5%) Query: 231 GLPTLV-------LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283 G+P L+ L L ++ P LG + + F S +ALS A ++AE Sbjct: 120 GVPALIQLIFWFNLSLLVREISLTLPFLGTLFAVRTNDFMTPFFSAVVALSLCEAGYMAE 179 Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343 IVR+G+ +VP GQ EAA ALG+ +R + + LPQAMR ++PP ++ +NLLK +SL Sbjct: 180 IVRAGIKSVPSGQSEAASALGMPYRMILKRITLPQAMRFVLPPTGNEAINLLKMTSLVTF 239 Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLS-LSIM 380 + DL +I +T + I ++++ F YL+ +SIM Sbjct: 240 IAVDDLFYTAQSIYARTFETIPLLIVVAFWYLAVVSIM 277 Score = 36.2 bits (82), Expect = 9.1, Method: Compositional matrix adjust. Identities = 26/80 (32%), Positives = 45/80 (56%), Gaps = 3/80 (3%) Query: 88 AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147 +I+ G NT L M+ A ++GT++ R+S + ++ VYV FR +P L+ + F Sbjct: 70 SIMRGLGNTLMLTVIIMVLAIVVGTVIAIMRVSPSPVLRAFAGVYVWFFRGVPALIQLIF 129 Query: 148 LYKSVLSVLPIPDHSIVLPF 167 + LS+L + + S+ LPF Sbjct: 130 WFN--LSLL-VREISLTLPF 146 >gi|229159722|ref|ZP_04287731.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus R309803] gi|228623747|gb|EEK80564.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus R309803] Length = 214 Score = 86.7 bits (213), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 41/89 (46%), Positives = 66/89 (74%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +AL+ + AA I+EIVRSGL+++ +GQ+EAA + GLT+ +A ++LPQA+R ++PPL SQ Sbjct: 93 VALTIFEAAMISEIVRSGLLSIEKGQIEAARSSGLTYVQALWHIILPQALRRMVPPLVSQ 152 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQ 359 +++LLK++SLAV + +L+ I Q Sbjct: 153 FISLLKDTSLAVVISLPELMHNAQIISGQ 181 Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust. Identities = 22/61 (36%), Positives = 37/61 (60%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G + T +A ++ + IIG+++G R +V+ I + VEV RN+P L++IFF Sbjct: 15 LLKGLLITLEVALIAIVLSFIIGSVIGILRYMKIPVVSQILGIIVEVIRNLPLLLIIFFT 74 Query: 149 Y 149 Y Sbjct: 75 Y 75 >gi|241765821|ref|ZP_04763760.1| polar amino acid ABC transporter, inner membrane subunit [Acidovorax delafieldii 2AN] gi|241364269|gb|EER59431.1| polar amino acid ABC transporter, inner membrane subunit [Acidovorax delafieldii 2AN] Length = 260 Score = 86.7 bits (213), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 61/147 (41%), Positives = 84/147 (57%), Gaps = 12/147 (8%) Query: 221 LLYISTFLIF---GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT 277 L +++ F I+ G P LV I Y F PVL + G + P+F + +AL Sbjct: 88 LRWLAGFYIWAIRGTPLLVQILFVY---FALPVL-----VPGLNL-PDFAAAVVALGLNV 138 Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 A+ AE +R+GL+AVPRGQ EAA ALGL V+ PQA + +PPL S ++ LLK+ Sbjct: 139 GAYNAEAIRAGLLAVPRGQTEAARALGLGRGHVFFDVVFPQAFKISLPPLVSNFVALLKD 198 Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAI 364 SSLA A+G +L +VG I + T Q I Sbjct: 199 SSLAYAIGVVELTNVGNRIQSATFQPI 225 >gi|222085817|ref|YP_002544347.1| amino acid ABC transporter [Agrobacterium radiobacter K84] gi|221723265|gb|ACM26421.1| amino acid ABC transporter [Agrobacterium radiobacter K84] Length = 293 Score = 86.7 bits (213), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 65/200 (32%), Positives = 105/200 (52%), Gaps = 10/200 (5%) Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240 LT++ A VF LG VL++ AT KA+ +++ F G+P +V I Sbjct: 69 LTLELMAGAMVFGTALGCVLAVMATS-----QNLVLKAMAAVFVWWFR--GVPLIVQIFF 121 Query: 241 KYQLHFDKPV--LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQME 298 + + P +G F V+P ++AL + AA ++EI+R GL++V RGQ + Sbjct: 122 WFNIALFIPQVGIGSFTISINDLVTPSLAG-FLALGLHEAANMSEIIRGGLMSVDRGQRD 180 Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN 358 AA ALGL + R V+LPQA R IIPP +Q + +LK S++ +G DL++ I Sbjct: 181 AAAALGLRPVQRLRAVILPQAARLIIPPTGNQAIGMLKASAIVSVIGMQDLLTQAQAIYA 240 Query: 359 QTGQAIEIILIWMFIYLSLS 378 + IE++ + YL+++ Sbjct: 241 RNFLIIELLFVASIWYLTIT 260 >gi|120603331|ref|YP_967731.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio vulgaris DP4] gi|120563560|gb|ABM29304.1| amino acid ABC transporter membrane protein 1, PAAT family [Desulfovibrio vulgaris DP4] Length = 278 Score = 86.7 bits (213), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 56/152 (36%), Positives = 89/152 (58%), Gaps = 10/152 (6%) Query: 247 DKPVLGQFNFIGGSTVSPEF-----MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301 + P+L Q F+ ++P F S +AL + A++AEI+R+G+ AVP+GQ EA+ Sbjct: 125 NTPLLVQL-FVTYFAIAPVFGLGRMASAVMALGVFEGAYMAEILRAGIAAVPQGQWEASR 183 Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361 +LG+ V+LPQA+R +PPLT Q ++L+K+SSLA A+ +L TII +T Sbjct: 184 SLGMDEPGTYVQVILPQALRRALPPLTGQAVSLVKDSSLASAIAIHELTMQAQTIIAETF 243 Query: 362 QAIEIIL----IWMFIYLSLSIMIALFMNRLN 389 E+ L I++ + LSLS + L R++ Sbjct: 244 LTFEVWLLTAAIYLCVTLSLSAVARLLERRMH 275 >gi|330898557|gb|EGH29976.1| amino acid ABC transporter permease [Pseudomonas syringae pv. japonica str. M301072PT] Length = 221 Score = 86.3 bits (212), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 61/220 (27%), Positives = 108/220 (49%), Gaps = 23/220 (10%) Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPT 234 +T+ A V VLG +L+L ++ G +++PLL + T+ +P Sbjct: 19 MTLKLMAMGVVGGLVLGTLLALMRLSSNKLLANVAGAYVNYFRSIPLLLVITWFYLAVP- 77 Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294 L++ D P+ F S +A + AA+ EIVR+G+ ++ + Sbjct: 78 ---FVLRWITGEDTPI-------------GAFASCVVAFMMFEAAYFCEIVRAGVQSISK 121 Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354 GQM AA ALG+ + + RL++LPQA R + P L Q + L +++SL VG D ++ Sbjct: 122 GQMGAAQALGMNYSQMMRLIILPQAFRKMTPLLLQQSIILFQDTSLVYTVGLVDFLNASR 181 Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394 + + G+A E ++I +Y ++S +L + RL + A+ Sbjct: 182 SSGDIIGRANEFLIIAGLVYFTISFAASLVVKRLQKRFAV 221 Score = 45.1 bits (105), Expect = 0.021, Method: Compositional matrix adjust. Identities = 28/65 (43%), Positives = 40/65 (61%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151 G V T L G++ ++GTL+ RLS+NKL+A + YV FR+IP L+VI + Y + Sbjct: 16 GMVMTLKLMAMGVVGGLVLGTLLALMRLSSNKLLANVAGAYVNYFRSIPLLLVITWFYLA 75 Query: 152 VLSVL 156 V VL Sbjct: 76 VPFVL 80 >gi|315659420|ref|ZP_07912283.1| ABC superfamily ATP binding cassette transporter, membrane protein [Staphylococcus lugdunensis M23590] gi|315495539|gb|EFU83871.1| ABC superfamily ATP binding cassette transporter, membrane protein [Staphylococcus lugdunensis M23590] Length = 239 Score = 86.3 bits (212), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 62/209 (29%), Positives = 120/209 (57%), Gaps = 14/209 (6%) Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248 I + +F+LG++L+LF T L R + +A+ +Y+S +I G P +V + + + + Sbjct: 34 ITIVTFILGLILALF-TALMRISTSRILRAIARIYVS--IIRGTPMIVQL---FIIFYGI 87 Query: 249 PVLGQFNFIGGS-----TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 P LG+ I G T++P ++ I LS A+ +EI+R G+I++P+GQ EAA ++ Sbjct: 88 PELGRL--ITGDADNQWTLAPVIAAI-IGLSLNVGAYASEIIRGGIISIPKGQTEAAYSI 144 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363 G+T+R+ + ++LPQA+R IP L + +L+L+K++SL + A++ + + T + Sbjct: 145 GMTYRQTVQRIILPQAIRVSIPALGNTFLSLIKDTSLLGFILVAEMFRKAQEVASTTYEY 204 Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392 I ++ +Y + +I++ +KI Sbjct: 205 FTIYILVAIMYWVVCFIISVLQGLYESKI 233 >gi|168492769|ref|ZP_02716912.1| ABC transporter membrane-spanning permease - glutamine transport [Streptococcus pneumoniae CDC3059-06] gi|183577030|gb|EDT97558.1| ABC transporter membrane-spanning permease - glutamine transport [Streptococcus pneumoniae CDC3059-06] Length = 225 Score = 86.3 bits (212), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 49/131 (37%), Positives = 75/131 (57%), Gaps = 3/131 (2%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P + + + + Y A+IAE++RSG+ ++P GQMEAA++ G T+ A RL+ LPQA I Sbjct: 91 PIYWTAVLCVGLYHGAYIAEVIRSGIQSIPSGQMEAALSQGFTYISAMRLITLPQAFCII 150 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 +PPLT+Q +NL+KN+S + DL+ V + G I L +Y +L +A Sbjct: 151 LPPLTNQIVNLIKNTSTVAIISGVDLMFVTKSWSALNGNYIPAFLGAALLYFALCFPVAQ 210 Query: 384 F---MNRLNAK 391 F M + N K Sbjct: 211 FGRKMEQANKK 221 Score = 36.2 bits (82), Expect = 9.5, Method: Compositional matrix adjust. Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 5/76 (6%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151 GF+ T LA I A ++G GA S ++ + R++VE ++N P LV ++ Sbjct: 20 GFLFTLALAIGSFILAMVLGIFFGAMSTSKRPILRILARIFVEFYQNTPLLVQFVIVFYG 79 Query: 152 VLSVLP-IPDHSIVLP 166 LP I DH I++P Sbjct: 80 ----LPLISDHIIMIP 91 >gi|26986969|ref|NP_742394.1| polar amino acid ABC transporter inner membrane subunit [Pseudomonas putida KT2440] gi|148545497|ref|YP_001265599.1| polar amino acid ABC transporter inner membrane subunit [Pseudomonas putida F1] gi|24981583|gb|AAN65858.1|AE016214_3 cysteine ABC transporter, permease protein, putative [Pseudomonas putida KT2440] gi|148509555|gb|ABQ76415.1| polar amino acid ABC transporter, inner membrane subunit [Pseudomonas putida F1] gi|313496589|gb|ADR57955.1| Polar amino acid ABC transporter inner membrane subunit [Pseudomonas putida BIRD-1] Length = 222 Score = 86.3 bits (212), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 68/212 (32%), Positives = 113/212 (53%), Gaps = 28/212 (13%) Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPL-----LYISTFLIFGLPTLVLIALKYQLHF 246 F VLG L+L RLS K LPL +Y+S F G P LV + + ++F Sbjct: 33 FGLVLGFALALM--RLS--------KILPLNWLARVYVSFFR--GTPLLVQL---FVIYF 77 Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306 P +G + P SL I LS AA+I EI+R+ + ++ RGQ EAA ++G+T Sbjct: 78 GMPQIG-------IELDPIPASL-IGLSLNMAAYICEILRAAISSIDRGQWEAAASIGMT 129 Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 +A R +LPQA+R+ +PPL + +++L+K+++LA + +L I +T + + Sbjct: 130 RVQAMRRAILPQALRTALPPLGNSFISLVKDTALAATIQVPELFRQAQLITARTFEVFTM 189 Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 + IY L ++A F NR+ A++ +++ Sbjct: 190 YVAVAVIYWVLCSILAHFQNRMEARVNQHDQE 221 >gi|307130004|ref|YP_003882020.1| amino acid ABC transporter permease [Dickeya dadantii 3937] gi|306527533|gb|ADM97463.1| Amino acid ABC transporter, permease protein [Dickeya dadantii 3937] Length = 281 Score = 86.3 bits (212), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 52/124 (41%), Positives = 75/124 (60%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F S IALS A++AE +RSG++AVPRGQ EAA+ALGL+ V+ PQA+R IIP Sbjct: 142 FTSGIIALSLNYGAYLAETIRSGVLAVPRGQKEAAMALGLSRWVIITHVVAPQALRIIIP 201 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 P SQ+++++K+SSL +G +L + + T +E++ IY LSI + L Sbjct: 202 PAGSQFISMIKDSSLVSLMGLWELNFLAQSYGRSTYHYMEMLTTAAVIYWLLSIGLELLQ 261 Query: 386 NRLN 389 RL Sbjct: 262 GRLE 265 >gi|295099754|emb|CBK88843.1| amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Eubacterium cylindroides T2-87] Length = 238 Score = 86.3 bits (212), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 58/204 (28%), Positives = 110/204 (53%), Gaps = 10/204 (4%) Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252 + +LG +L L A + R H K A+ Y T +I G P L+ + Y + P++G Sbjct: 37 TVILGCILGLLAILMKRS-HIKVLNAISTAY--TQVIRGTPMLLQL---YIWLYGFPMIG 90 Query: 253 ----QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308 +G S EF++ +AL+ + A+I E++R GL ++ +GQMEA +LG ++ Sbjct: 91 ISIPSIPMLGSVYGSREFLTAVVALAINSGAYICELLRGGLDSIDKGQMEAGRSLGFSNL 150 Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368 + R +++PQA+R ++P L ++++ ++K SS+ VG D++ + T E ++ Sbjct: 151 ETMRYIIVPQAIRVVLPGLCNEFIMMIKESSIVSVVGVFDIMYTSNIVKASTYSVFEPLI 210 Query: 369 IWMFIYLSLSIMIALFMNRLNAKI 392 I IY +L+ ++ M+ + K+ Sbjct: 211 IIAIIYFALTSVLTTIMSLIERKL 234 >gi|261822750|ref|YP_003260856.1| polar amino acid ABC transporter inner membrane protein [Pectobacterium wasabiae WPP163] gi|261606763|gb|ACX89249.1| polar amino acid ABC transporter, inner membrane subunit [Pectobacterium wasabiae WPP163] Length = 254 Score = 86.3 bits (212), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 41/133 (30%), Positives = 79/133 (59%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+S +A++ A+++EI R+G+ ++ RGQMEA+ +LG+++ + R V+LPQA R ++P Sbjct: 122 FLSCVVAITLNAGAYVSEIFRAGIQSIDRGQMEASRSLGMSYGRTMRKVILPQAFRRMLP 181 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PL + + ++K+SSLA A+G ADL T+ E L +Y ++ +++L + Sbjct: 182 PLGNNAIAIVKDSSLASAIGLADLAYAARTVSGAYATYWEPYLAISIVYWVITFLLSLLV 241 Query: 386 NRLNAKIALKEKK 398 + + + + Sbjct: 242 RHMEMRFGKSDSR 254 >gi|296535859|ref|ZP_06898018.1| ectoine/hydroxyectoine ABC superfamily ATP binding cassette transporter, membrane protein [Roseomonas cervicalis ATCC 49957] gi|296263809|gb|EFH10275.1| ectoine/hydroxyectoine ABC superfamily ATP binding cassette transporter, membrane protein [Roseomonas cervicalis ATCC 49957] Length = 220 Score = 86.3 bits (212), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 46/126 (36%), Positives = 76/126 (60%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +ALS Y AF +EIVR G+ ++ GQ EAA+ALG+T ++ R ++LPQAM+ ++PPL +Q Sbjct: 95 LALSLYGGAFYSEIVRGGIASIESGQSEAALALGMTPAQSMRRIVLPQAMKRMVPPLMNQ 154 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 + LKN+SL + DL+ G + + + +EI + IY + + L + RL Sbjct: 155 SIIQLKNTSLVSVLAVPDLLYQGQAAAHDSYRPLEIYTVVAIIYFVVLFPLTLLVGRLER 214 Query: 391 KIALKE 396 ++A + Sbjct: 215 RLARSD 220 >gi|229056417|ref|ZP_04195830.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus AH603] gi|228720891|gb|EEL72440.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus AH603] Length = 214 Score = 86.3 bits (212), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 41/89 (46%), Positives = 66/89 (74%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +AL+ + AA I+EIVRSGL+++ +GQ+EAA + GLT+ +A ++LPQA+R ++PPL SQ Sbjct: 93 VALTIFEAAMISEIVRSGLLSIEKGQIEAARSSGLTYVQALWHIILPQALRRMVPPLVSQ 152 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQ 359 +++LLK++SLAV + +L+ I Q Sbjct: 153 FISLLKDTSLAVVISLPELMHNAQIISGQ 181 Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust. Identities = 22/61 (36%), Positives = 37/61 (60%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G + T +A ++ + IIG+++G R +V+ I + VEV RN+P L++IFF Sbjct: 15 LLKGLLITLEVALVAIVLSFIIGSVIGILRYMKIPVVSQILGIIVEVIRNLPLLLIIFFT 74 Query: 149 Y 149 Y Sbjct: 75 Y 75 >gi|307704889|ref|ZP_07641780.1| binding-protein-dependent transport system inner membrane component family protein [Streptococcus mitis SK597] gi|307621503|gb|EFO00549.1| binding-protein-dependent transport system inner membrane component family protein [Streptococcus mitis SK597] Length = 227 Score = 86.3 bits (212), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 60/210 (28%), Positives = 119/210 (56%), Gaps = 21/210 (10%) Query: 195 VLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF---GLPTLVLIALKYQL-HFDKPV 250 +LG+VL+ F +++ K PL++++ ++ G P +V I + + L H + P Sbjct: 33 ILGVVLA---------FGQRS-KFKPLVWLANLYVWIFRGTPMMVQIMIAFALMHINAPT 82 Query: 251 LGQFNFIGG--STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308 + Q +G S + P + +S + A+++E VR+G+ AVP+GQ+EAA +LG+ + Sbjct: 83 I-QVGILGVDFSRLIPGIL----IISMNSGAYVSETVRAGINAVPKGQLEAAYSLGIRPK 137 Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368 A R V+LPQA+++I+P L ++++ ++K+SSL A+G +L + T+ T + +L Sbjct: 138 NAMRYVILPQAIKNILPALGNEFITIIKDSSLLSAIGVMELWNGATTVSTTTYLPLTPLL 197 Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 F YL ++ ++ + + ++ +KK Sbjct: 198 FAAFYYLIMTSILTVALKAFEKRMGQGDKK 227 >gi|300784268|ref|YP_003764559.1| amino acid ABC transporter permease [Amycolatopsis mediterranei U32] gi|299793782|gb|ADJ44157.1| permease component of ABC-type amino acid transport system [Amycolatopsis mediterranei U32] Length = 215 Score = 86.3 bits (212), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 58/171 (33%), Positives = 92/171 (53%), Gaps = 30/171 (17%) Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279 PL + F +F P L ++ L Y F + +AL+ YT+A Sbjct: 62 PLTLVFAFFVFAYPLLDIVKLDY-----------------------FPAAVVALTVYTSA 98 Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339 FI E+VRSG+ VP GQ EA ALGLT + V+LPQA+RS++PPL S + LLKN++ Sbjct: 99 FICEVVRSGINTVPVGQAEAGRALGLTFGQILGQVVLPQALRSVVPPLISTLIALLKNTT 158 Query: 340 LAVAVGFADLVSVGGTI---INQTGQAIEIILIWMFIYLSLSIMIALFMNR 387 +A GF+ V+ G I +++ G++ + L+W+ + + + + F+ R Sbjct: 159 --IAAGFS--VAEAGAIRAYLSERGESQLVGLLWVALGFIILVAVLSFVQR 205 >gi|229588677|ref|YP_002870796.1| glutamate/aspartate ABC transporter permease [Pseudomonas fluorescens SBW25] gi|229360543|emb|CAY47400.1| glutamate/aspartate ABC transport system, permease [Pseudomonas fluorescens SBW25] Length = 223 Score = 86.3 bits (212), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 57/205 (27%), Positives = 102/205 (49%), Gaps = 23/205 (11%) Query: 196 LGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249 LG +L+L S+ G +++PLL + T+ +P L++ D P Sbjct: 36 LGTILALMRLSSSKLLSRVAGAYVNYFRSIPLLLVITWFYLAVP----FVLRWITGEDTP 91 Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309 + F S +A + AA+ EIVR+G+ ++P+GQM AA A+G+T+ + Sbjct: 92 I-------------GAFTSCVVAFMMFEAAYFCEIVRAGVQSIPKGQMAAAQAMGMTYGQ 138 Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369 RL++LPQA R + P L Q + L +++SL VG D ++ + + G++ E ++ Sbjct: 139 TMRLIILPQAFRKMTPLLLQQSIILFQDTSLVYTVGLVDFLNSARSNGDIIGRSNEFLIF 198 Query: 370 WMFIYLSLSIMIALFMNRLNAKIAL 394 +Y +S +L + RL + A+ Sbjct: 199 AGVVYFIISFSASLLVKRLQKRFAV 223 Score = 40.8 bits (94), Expect = 0.40, Method: Compositional matrix adjust. Identities = 25/65 (38%), Positives = 39/65 (60%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151 G V T L G++ +GT++ RLS++KL++ + YV FR+IP L+VI + Y + Sbjct: 18 GMVMTLQLMVMGVVGGIALGTILALMRLSSSKLLSRVAGAYVNYFRSIPLLLVITWFYLA 77 Query: 152 VLSVL 156 V VL Sbjct: 78 VPFVL 82 >gi|260777100|ref|ZP_05885994.1| amino acid ABC transporter permease protein [Vibrio coralliilyticus ATCC BAA-450] gi|260606766|gb|EEX33040.1| amino acid ABC transporter permease protein [Vibrio coralliilyticus ATCC BAA-450] Length = 265 Score = 86.3 bits (212), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 72/238 (30%), Positives = 122/238 (51%), Gaps = 23/238 (9%) Query: 158 IPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGK 217 +PD+ G + L +T+ +A +F+ ++G++ +L +LS+ G+ Sbjct: 43 VPDYIAFYEDGEWWPAELLEGLWVTIKISAWSLLFTLLIGMLTALL--KLSQSV---VGR 97 Query: 218 ALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT 277 + YI LI P LV I L Y + PV+G F + +ALS + Sbjct: 98 TIANTYIE--LIRNTPLLVQIYLLYFVF--GPVIGL----------DRFATAILALSLFQ 143 Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 A+ AEI R GL ++P+GQ EAA +LGL+ V+ PQ ++ +PPLT++ ++L+KN Sbjct: 144 GAYTAEIFRGGLNSIPKGQFEAARSLGLSPFSTYYDVIFPQLLQRTLPPLTNEVVSLVKN 203 Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIIL----IWMFIYLSLSIMIALFMNRLNAK 391 SS+ + DL + G I+++T EI I++ + LSLS + A ++L A+ Sbjct: 204 SSIVSVMAIFDLTTEGRNIVSETAMPFEIWFSVAAIYLLLTLSLSGISAWLEHKLGAQ 261 >gi|27378208|ref|NP_769737.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] gi|27351355|dbj|BAC48362.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] Length = 264 Score = 86.3 bits (212), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 67/191 (35%), Positives = 101/191 (52%), Gaps = 12/191 (6%) Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252 +F +GIV+ + R + AL LY+ F +P L + L Y + + + Sbjct: 37 AFAIGIVVGI-----GRTVQNRAIAALARLYVEIFR--NIPVLAQMFLWYFVLPEILPVT 89 Query: 253 QFNFIGGSTVSPEFMSLYIALSC---YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309 N I + P + S AL C YTAA IAE VR+G+ A+PRGQ EAA ALGLT Sbjct: 90 LGNAI--KQIPPPWGSFVPALLCLGLYTAARIAEQVRAGIEALPRGQTEAASALGLTAYL 147 Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369 R +++PQA+R I+P LTS+ + + KN+S+A+ +G +L + I T Q Sbjct: 148 TYRHIIVPQALRLIVPSLTSEVMGIYKNTSVALTIGLMELTAQARQISEATFQTFTAFGA 207 Query: 370 WMFIYLSLSIM 380 IYL+L+++ Sbjct: 208 ATLIYLALALI 218 Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 37/97 (38%), Positives = 51/97 (52%), Gaps = 5/97 (5%) Query: 80 TSDSS-YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138 T+D Y +L G T LAF G A IG +VG GR N+ +A + R+YVE+FRN Sbjct: 9 TADGQRYIDWLLSGLGWTLALAFFGWWIAFAIGIVVGIGRTVQNRAIAALARLYVEIFRN 68 Query: 139 IPPLVVIFFLYKSVLSVLPI----PDHSIVLPFGMFL 171 IP L +F Y + +LP+ I P+G F+ Sbjct: 69 IPVLAQMFLWYFVLPEILPVTLGNAIKQIPPPWGSFV 105 >gi|29375694|ref|NP_814848.1| amino acid ABC transporter, permease protein [Enterococcus faecalis V583] gi|227518373|ref|ZP_03948422.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus faecalis TX0104] gi|227552902|ref|ZP_03982951.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus faecalis HH22] gi|229546203|ref|ZP_04434928.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus faecalis TX1322] gi|229550388|ref|ZP_04439113.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus faecalis ATCC 29200] gi|256618702|ref|ZP_05475548.1| polar amino acid ABC uptake transporter membrane-spanning protein [Enterococcus faecalis ATCC 4200] gi|256852768|ref|ZP_05558138.1| amino acid ABC transporter [Enterococcus faecalis T8] gi|256958615|ref|ZP_05562786.1| amino acid ABC transporter permease [Enterococcus faecalis DS5] gi|256962286|ref|ZP_05566457.1| polar amino acid ABC uptake transporter membrane-spanning protein [Enterococcus faecalis Merz96] gi|257078031|ref|ZP_05572392.1| amino acid ABC transporter permease [Enterococcus faecalis JH1] gi|257082919|ref|ZP_05577280.1| polar amino acid ABC uptake transporter membrane-spanning protein [Enterococcus faecalis E1Sol] gi|257085621|ref|ZP_05579982.1| amino acid ABC transporter permease [Enterococcus faecalis Fly1] gi|257086473|ref|ZP_05580834.1| polar amino acid ABC uptake transporter membrane-spanning protein [Enterococcus faecalis D6] gi|257089530|ref|ZP_05583891.1| ABC polar amino acid transporter permease [Enterococcus faecalis CH188] gi|257418947|ref|ZP_05595941.1| ABC amino acid transporter permease [Enterococcus faecalis T11] gi|257422965|ref|ZP_05599955.1| ABC amino acid transporter [Enterococcus faecalis X98] gi|293383315|ref|ZP_06629230.1| amino acid ABC transporter, permease protein [Enterococcus faecalis R712] gi|293387528|ref|ZP_06632077.1| amino acid ABC transporter, permease protein [Enterococcus faecalis S613] gi|294780989|ref|ZP_06746341.1| ABC transporter, permease protein [Enterococcus faecalis PC1.1] gi|300860018|ref|ZP_07106106.1| ABC transporter, permease protein [Enterococcus faecalis TUSoD Ef11] gi|307268768|ref|ZP_07550136.1| ABC transporter, permease protein [Enterococcus faecalis TX4248] gi|307274580|ref|ZP_07555760.1| ABC transporter, permease protein [Enterococcus faecalis TX2134] gi|307278846|ref|ZP_07559909.1| ABC transporter, permease protein [Enterococcus faecalis TX0860] gi|307288577|ref|ZP_07568561.1| ABC transporter, permease protein [Enterococcus faecalis TX0109] gi|307291101|ref|ZP_07570986.1| ABC transporter, permease protein [Enterococcus faecalis TX0411] gi|312899593|ref|ZP_07758919.1| ABC transporter, permease protein [Enterococcus faecalis TX0470] gi|312903651|ref|ZP_07762827.1| ABC transporter, permease protein [Enterococcus faecalis TX0635] gi|312905822|ref|ZP_07764842.1| ABC transporter, permease protein [Enterococcus faecalis DAPTO 512] gi|312909123|ref|ZP_07767982.1| ABC transporter, permease protein [Enterococcus faecalis DAPTO 516] gi|312951370|ref|ZP_07770268.1| ABC transporter, permease protein [Enterococcus faecalis TX0102] gi|29343155|gb|AAO80918.1| amino acid ABC transporter, permease protein [Enterococcus faecalis V583] gi|227074051|gb|EEI12014.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus faecalis TX0104] gi|227177974|gb|EEI58946.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus faecalis HH22] gi|229304510|gb|EEN70506.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus faecalis ATCC 29200] gi|229308727|gb|EEN74714.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus faecalis TX1322] gi|256598229|gb|EEU17405.1| polar amino acid ABC uptake transporter membrane-spanning protein [Enterococcus faecalis ATCC 4200] gi|256711227|gb|EEU26265.1| amino acid ABC transporter [Enterococcus faecalis T8] gi|256949111|gb|EEU65743.1| amino acid ABC transporter permease [Enterococcus faecalis DS5] gi|256952782|gb|EEU69414.1| polar amino acid ABC uptake transporter membrane-spanning protein [Enterococcus faecalis Merz96] gi|256986061|gb|EEU73363.1| amino acid ABC transporter permease [Enterococcus faecalis JH1] gi|256990949|gb|EEU78251.1| polar amino acid ABC uptake transporter membrane-spanning protein [Enterococcus faecalis E1Sol] gi|256993651|gb|EEU80953.1| amino acid ABC transporter permease [Enterococcus faecalis Fly1] gi|256994503|gb|EEU81805.1| polar amino acid ABC uptake transporter membrane-spanning protein [Enterococcus faecalis D6] gi|256998342|gb|EEU84862.1| ABC polar amino acid transporter permease [Enterococcus faecalis CH188] gi|257160775|gb|EEU90735.1| ABC amino acid transporter permease [Enterococcus faecalis T11] gi|257164789|gb|EEU94749.1| ABC amino acid transporter [Enterococcus faecalis X98] gi|291079338|gb|EFE16702.1| amino acid ABC transporter, permease protein [Enterococcus faecalis R712] gi|291083038|gb|EFE20001.1| amino acid ABC transporter, permease protein [Enterococcus faecalis S613] gi|294451935|gb|EFG20385.1| ABC transporter, permease protein [Enterococcus faecalis PC1.1] gi|295112702|emb|CBL31339.1| amino acid ABC transporter membrane protein 1, PAAT family (TC 3.A.1.3.-) [Enterococcus sp. 7L76] gi|300850836|gb|EFK78585.1| ABC transporter, permease protein [Enterococcus faecalis TUSoD Ef11] gi|306497755|gb|EFM67287.1| ABC transporter, permease protein [Enterococcus faecalis TX0411] gi|306500484|gb|EFM69817.1| ABC transporter, permease protein [Enterococcus faecalis TX0109] gi|306504517|gb|EFM73724.1| ABC transporter, permease protein [Enterococcus faecalis TX0860] gi|306508732|gb|EFM77822.1| ABC transporter, permease protein [Enterococcus faecalis TX2134] gi|306514896|gb|EFM83443.1| ABC transporter, permease protein [Enterococcus faecalis TX4248] gi|310628161|gb|EFQ11444.1| ABC transporter, permease protein [Enterococcus faecalis DAPTO 512] gi|310630630|gb|EFQ13913.1| ABC transporter, permease protein [Enterococcus faecalis TX0102] gi|310633004|gb|EFQ16287.1| ABC transporter, permease protein [Enterococcus faecalis TX0635] gi|311290547|gb|EFQ69103.1| ABC transporter, permease protein [Enterococcus faecalis DAPTO 516] gi|311293272|gb|EFQ71828.1| ABC transporter, permease protein [Enterococcus faecalis TX0470] gi|315028075|gb|EFT40007.1| ABC transporter, permease protein [Enterococcus faecalis TX2137] gi|315030716|gb|EFT42648.1| ABC transporter, permease protein [Enterococcus faecalis TX4000] gi|315031596|gb|EFT43528.1| ABC transporter, permease protein [Enterococcus faecalis TX0017] gi|315034962|gb|EFT46894.1| ABC transporter, permease protein [Enterococcus faecalis TX0027] gi|315144631|gb|EFT88647.1| ABC transporter, permease protein [Enterococcus faecalis TX2141] gi|315148455|gb|EFT92471.1| ABC transporter, permease protein [Enterococcus faecalis TX4244] gi|315150402|gb|EFT94418.1| ABC transporter, permease protein [Enterococcus faecalis TX0012] gi|315153641|gb|EFT97657.1| ABC transporter, permease protein [Enterococcus faecalis TX0031] gi|315156541|gb|EFU00558.1| ABC transporter, permease protein [Enterococcus faecalis TX0043] gi|315158367|gb|EFU02384.1| ABC transporter, permease protein [Enterococcus faecalis TX0312] gi|315160938|gb|EFU04955.1| ABC transporter, permease protein [Enterococcus faecalis TX0645] gi|315165529|gb|EFU09546.1| ABC transporter, permease protein [Enterococcus faecalis TX1302] gi|315168386|gb|EFU12403.1| ABC transporter, permease protein [Enterococcus faecalis TX1341] gi|315170969|gb|EFU14986.1| ABC transporter, permease protein [Enterococcus faecalis TX1342] gi|315573710|gb|EFU85901.1| ABC transporter, permease protein [Enterococcus faecalis TX0309B] gi|315577479|gb|EFU89670.1| ABC transporter, permease protein [Enterococcus faecalis TX0630] gi|315582675|gb|EFU94866.1| ABC transporter, permease protein [Enterococcus faecalis TX0309A] gi|323480357|gb|ADX79796.1| amino acid ABC transporter, permease protein [Enterococcus faecalis 62] gi|329576391|gb|EGG57904.1| ABC transporter, permease protein [Enterococcus faecalis TX1467] Length = 237 Score = 86.3 bits (212), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 60/159 (37%), Positives = 88/159 (55%), Gaps = 11/159 (6%) Query: 247 DKPVLGQF--NFIGGSTVSP--EFMSLYIALSC---YTAAFIAEIVRSGLIAVPRGQMEA 299 + P+L QF + G +SP F IA+ C Y A+I+E+VRSG+ AVPRGQ EA Sbjct: 79 NTPLLIQFIVVYYGFPLLSPLLSFSITTIAILCVGLYHGAYISEVVRSGIGAVPRGQFEA 138 Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359 A + GLT+ + R V+LPQA R ++PPLT+Q +NL+KN+S + AD++ + + Sbjct: 139 AYSQGLTYGQTMRYVILPQAWRIMLPPLTNQVVNLIKNTSTVAIISGADVMFAANSWSSV 198 Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 I + F+Y L +A L K+ K KK Sbjct: 199 NLNYIPAFALAGFLYFILCFPLA----NLARKMEEKNKK 233 >gi|324324681|gb|ADY19941.1| glutamine ABC transporter permease [Bacillus thuringiensis serovar finitimus YBT-020] Length = 214 Score = 86.3 bits (212), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 41/89 (46%), Positives = 66/89 (74%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +AL+ + AA I+EIVRSGL+++ +GQ+EAA + GLT+ +A ++LPQA+R ++PPL SQ Sbjct: 93 VALTIFEAAMISEIVRSGLLSIEKGQIEAARSSGLTYVQALWHIILPQALRRMVPPLVSQ 152 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQ 359 +++LLK++SLAV + +L+ I Q Sbjct: 153 FISLLKDTSLAVVISLPELMHNAQIISGQ 181 Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust. Identities = 22/61 (36%), Positives = 37/61 (60%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G + T +A ++ + IIG+++G R +V+ I + VEV RN+P L++IFF Sbjct: 15 LLKGLLITLEVALIAIVLSFIIGSVIGILRYMKIPIVSQILGIIVEVIRNLPLLLIIFFT 74 Query: 149 Y 149 Y Sbjct: 75 Y 75 >gi|256762126|ref|ZP_05502706.1| amino acid ABC transporter, permease [Enterococcus faecalis T3] gi|256683377|gb|EEU23072.1| amino acid ABC transporter, permease [Enterococcus faecalis T3] Length = 235 Score = 86.3 bits (212), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 60/159 (37%), Positives = 88/159 (55%), Gaps = 11/159 (6%) Query: 247 DKPVLGQF--NFIGGSTVSP--EFMSLYIALSC---YTAAFIAEIVRSGLIAVPRGQMEA 299 + P+L QF + G +SP F IA+ C Y A+I+E+VRSG+ AVPRGQ EA Sbjct: 77 NTPLLIQFIVVYYGFPLLSPLLSFSITTIAILCVGFYHGAYISEVVRSGIGAVPRGQFEA 136 Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359 A + GLT+ + R V+LPQA R ++PPLT+Q +NL+KN+S + AD++ + + Sbjct: 137 AYSQGLTYGQTMRYVILPQAWRIMLPPLTNQVVNLIKNTSTVAIISGADVMFAANSWSSV 196 Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 I + F+Y L +A L K+ K KK Sbjct: 197 NLNYIPAFALAGFLYFILCFPLA----NLARKMEEKNKK 231 >gi|228912174|ref|ZP_04075889.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus thuringiensis IBL 200] gi|228847511|gb|EEM92450.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus thuringiensis IBL 200] Length = 193 Score = 86.3 bits (212), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 61/202 (30%), Positives = 110/202 (54%), Gaps = 15/202 (7%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 + SFV+GI L++ +++ + ++ +YIS F G P LV + + L+F P Sbjct: 2 IISFVIGIGLAIITKNKTKYLY-----SIARVYISFFR--GTPLLVQL---FVLYFGLP- 50 Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 TV + I LS AA+++EI+R L AV GQM+A +++G+T +A Sbjct: 51 ----QIFPTFTVLTAMQATLIGLSLNNAAYLSEIIRGSLNAVESGQMDACLSVGMTKAQA 106 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370 R ++ PQA+R +P L + ++ LLK SSL+ A+G A++++ + Q+ + +E L Sbjct: 107 MRQIIFPQAIRVAVPSLGNNFVGLLKESSLSFALGVAEILAQAKMLAAQSYRYMESYLAV 166 Query: 371 MFIYLSLSIMIALFMNRLNAKI 392 +Y ++I+I+ +L K+ Sbjct: 167 AIVYWIITIVISWGQKKLEKKL 188 >gi|237731335|ref|ZP_04561816.1| polar amino acid ABC transporter [Citrobacter sp. 30_2] gi|226906874|gb|EEH92792.1| polar amino acid ABC transporter [Citrobacter sp. 30_2] Length = 261 Score = 86.3 bits (212), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 49/132 (37%), Positives = 74/132 (56%) Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321 ++PEF+ L +T+AF+ E + SGL AV GQ EAA+A G + R +LLPQ + Sbjct: 109 LTPEFICSAWGLGVFTSAFLVEEIASGLQAVSAGQREAAVAQGFSSWAIFRHILLPQGLA 168 Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 + P+ QYLNL+K SSLA +GFA+L I + A+E + +YL I++ Sbjct: 169 NAWQPIVGQYLNLMKLSSLASGIGFAELTYQVRQIESYNAHALEAFAVGTVLYLFTGIIL 228 Query: 382 ALFMNRLNAKIA 393 + + RL + A Sbjct: 229 GMLLTRLGPQSA 240 Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust. Identities = 26/69 (37%), Positives = 41/69 (59%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 I+ GF+ T W+ +G++ AT+I + RL+ N+L + V+V VFRN P LV + F Sbjct: 18 IISGFLTTLWVTLAGIVLATLIAISLLGLRLTGNRLAKAMVGVWVSVFRNTPLLVQLMFW 77 Query: 149 YKSVLSVLP 157 Y + + LP Sbjct: 78 YFAAWNWLP 86 >gi|302531216|ref|ZP_07283558.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Streptomyces sp. AA4] gi|302440111|gb|EFL11927.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Streptomyces sp. AA4] Length = 319 Score = 86.3 bits (212), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 45/130 (34%), Positives = 80/130 (61%), Gaps = 3/130 (2%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 +F++ + L AA++AEIVR G+ +V GQ+EAA ALG++ K R ++LPQAMR II Sbjct: 157 QFVASLLGLGLNEAAYMAEIVRGGIQSVDSGQLEAASALGMSRGKTLRRIILPQAMRVII 216 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI---WMFIYLSLSIMI 381 PP ++ +++LK +SL V +G+ +L TI +Q + + ++++ W S+ ++ Sbjct: 217 PPTGNETISMLKTTSLVVVIGYFELFVSAQTIYSQNYKTVPLLIVAATWYLFMTSVLTVV 276 Query: 382 ALFMNRLNAK 391 ++ R A+ Sbjct: 277 QFYIERYFAR 286 >gi|311232933|gb|ADP85787.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio vulgaris RCH1] Length = 278 Score = 86.3 bits (212), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 56/152 (36%), Positives = 89/152 (58%), Gaps = 10/152 (6%) Query: 247 DKPVLGQFNFIGGSTVSPEF-----MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301 + P+L Q F+ ++P F S +AL + A++AEI+R+G+ AVP+GQ EA+ Sbjct: 125 NTPLLVQL-FVTYFAIAPVFGLGRMASAVMALGVFEGAYMAEILRAGIAAVPQGQWEASR 183 Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361 +LG+ V+LPQA+R +PPLT Q ++L+K+SSLA A+ +L TII +T Sbjct: 184 SLGMDEPGTYVQVILPQALRRALPPLTGQAVSLVKDSSLASAIAIHELTMQAQTIIAETF 243 Query: 362 QAIEIIL----IWMFIYLSLSIMIALFMNRLN 389 E+ L I++ + LSLS + L R++ Sbjct: 244 LTFEVWLLTAAIYLCVTLSLSAVARLLERRMH 275 >gi|206900671|ref|YP_002250772.1| glutamine ABC transporter, permease protein [Dictyoglomus thermophilum H-6-12] gi|206739774|gb|ACI18832.1| glutamine ABC transporter, permease protein [Dictyoglomus thermophilum H-6-12] Length = 218 Score = 86.3 bits (212), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 44/109 (40%), Positives = 70/109 (64%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + LS +AA+ EI RSG+ ++ +GQMEAA +LG+T+ +A R V+LPQA R I+PPLT++ Sbjct: 93 VGLSLNSAAYTGEIFRSGIQSIEKGQMEAARSLGMTYFQAMRYVILPQAFRRILPPLTNE 152 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379 ++++LK SSLA + +L+ G I+ L IYL +++ Sbjct: 153 FVSMLKESSLASTLAVTELLRAGREIVAWKANVFSPFLGVTLIYLLMTL 201 >gi|163791026|ref|ZP_02185447.1| putative ABC-type amino-acid transporter permease protein [Carnobacterium sp. AT7] gi|159873671|gb|EDP67754.1| putative ABC-type amino-acid transporter permease protein [Carnobacterium sp. AT7] Length = 236 Score = 86.3 bits (212), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 38/86 (44%), Positives = 61/86 (70%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 EFM I + Y A+I E+VR+G++++P+GQ EAA + G + + R V+LPQ ++SI+ Sbjct: 94 EFMIGVIGVGLYHGAYIGEVVRAGILSIPKGQQEAAYSQGFNYTQTMRYVILPQMVKSIL 153 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLV 350 PPLT+Q +NL+KN+S+ + ADL+ Sbjct: 154 PPLTNQAVNLIKNTSVLAIIAGADLM 179 Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust. Identities = 22/61 (36%), Positives = 38/61 (62%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151 GF+ T +A + + +IG ++G + N ++ I RVYVE+F+NIP ++ IFF+Y Sbjct: 25 GFLRTLQVAILALALSLVIGVIIGILSTAQNVILRSIARVYVEIFQNIPLVIQIFFMYNG 84 Query: 152 V 152 + Sbjct: 85 L 85 >gi|237785943|ref|YP_002906648.1| ABC transporter permease [Corynebacterium kroppenstedtii DSM 44385] gi|237758855|gb|ACR18105.1| ABC-type transport system, permease protein [Corynebacterium kroppenstedtii DSM 44385] Length = 310 Score = 86.3 bits (212), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 67/208 (32%), Positives = 107/208 (51%), Gaps = 14/208 (6%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV------LIALKY-Q 243 V + +GIVL++ A + R +++ YI F+ G+P L+A+ Y + Sbjct: 73 VLAMAIGIVLAVTAA-IMRQSENPVLRSVAWAYI--FVFRGIPVYTQLVFWGLLAVLYPK 129 Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 L P +F S + F + + L A++AEIVRSGL +V GQ EAA AL Sbjct: 130 LSMGVPFGPEFFKFDTSDIITAFWAATLGLGFNEGAYLAEIVRSGLESVDEGQHEAARAL 189 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA-DLVSVGGTIINQTGQ 362 G+ H R +++PQAMR IIPPL ++ + +LK +SL +AV F DL I N+ Sbjct: 190 GMKHSTVLRRIIIPQAMRVIIPPLGNETIGMLKTTSLVLAVPFTLDLQYATNAIANRLYA 249 Query: 363 AIEIILI---WMFIYLSLSIMIALFMNR 387 I ++++ W + S+ ++ F+ R Sbjct: 250 PIPLLIVAALWYLVVTSVLMVGQYFLER 277 >gi|229074426|ref|ZP_04207458.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus Rock4-18] gi|228708710|gb|EEL60851.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus Rock4-18] Length = 214 Score = 86.3 bits (212), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 41/89 (46%), Positives = 66/89 (74%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +AL+ + AA I+EIVRSGL+++ +GQ+EAA + GLT+ +A ++LPQA+R ++PPL SQ Sbjct: 93 VALTIFEAAMISEIVRSGLLSIEKGQIEAARSSGLTYVQALWHIILPQALRRMVPPLVSQ 152 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQ 359 +++LLK++SLAV + +L+ I Q Sbjct: 153 FISLLKDTSLAVVISLPELMHNAQIISGQ 181 Score = 38.9 bits (89), Expect = 1.6, Method: Compositional matrix adjust. Identities = 22/61 (36%), Positives = 37/61 (60%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G + T +A ++ + IIG+++G R + +V+ I VEV RN+P L++IFF Sbjct: 15 LLKGLLITLEVALVAIVLSFIIGSVIGILRYTKIPVVSQILGFIVEVIRNLPLLLIIFFT 74 Query: 149 Y 149 Y Sbjct: 75 Y 75 >gi|170757509|ref|YP_001781580.1| His/Glu/Gln/Arg/opine ABC transporter permease [Clostridium botulinum B1 str. Okra] gi|169122721|gb|ACA46557.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Clostridium botulinum B1 str. Okra] Length = 228 Score = 86.3 bits (212), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 51/182 (28%), Positives = 103/182 (56%), Gaps = 14/182 (7%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 + P+L + +GLPT I +++ + P+LG NF P+F + +ALS Sbjct: 61 RGTPVLVQLYIIYYGLPT---IGIRFP---EVPILGS-NF-------PDFFAGILALSIN 106 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 + A++AEI+R+G+ AV +GQMEAA +LG++ A + V++PQA ++I+P L ++++ ++K Sbjct: 107 SGAYVAEIIRAGIQAVDKGQMEAARSLGMSESMAMKNVIIPQAFKNILPALGNEFITIIK 166 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 SS+ +G +L+ T+ + E +L+ +Y L+ ++ + ++ + + Sbjct: 167 ESSIVSIIGIHELMYNADTVRGNIFRPFEPLLVAALMYFILTFTLSKLLGVAERRMRVSD 226 Query: 397 KK 398 + Sbjct: 227 RN 228 >gi|78355214|ref|YP_386663.1| amino acid ABC transporter permease [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78217619|gb|ABB36968.1| amino acid ABC transporter membrane protein, PAAT family [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 251 Score = 86.3 bits (212), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 62/214 (28%), Positives = 111/214 (51%), Gaps = 37/214 (17%) Query: 190 FVFSFVLGIVLSLFATRLSRHF--------HEKTGKALPLLYISTFLIFGLPTLVLIALK 241 VF F++G ++ L R+SR+ + + + PL+ FL FGLP ++ I + Sbjct: 60 LVFGFIIGTLVGL--GRISRNRLCNAVAVSYVEAIRGTPLIVQVMFLYFGLPLVLGIRI- 116 Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301 P + +A++ + A+IAEIVR + ++ GQMEA Sbjct: 117 ----------------------PPVTAGVVAIAVNSGAYIAEIVRGSIQSINTGQMEAGR 154 Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361 ++GLTH + ++ PQA + +IPPL +Q++ LK++SL V +G +L G II Sbjct: 155 SIGLTHLQTMLYIIWPQAFKRMIPPLGNQFIISLKDTSLLVVIGVGELTRQGQEIIAVNF 214 Query: 362 QAIEIIL----IWMFIYLSLSIMIALFMNRLNAK 391 +A E+ L +++ + L+LS ++ ++ +LNA+ Sbjct: 215 RAFEVWLTVAIMYLCMTLTLSQVLRMYERKLNAR 248 Score = 43.1 bits (100), Expect = 0.071, Method: Compositional matrix adjust. Identities = 22/47 (46%), Positives = 29/47 (61%) Query: 103 GMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 G++ IIGTLVG GR+S N+L + YVE R P +V + FLY Sbjct: 59 GLVFGFIIGTLVGLGRISRNRLCNAVAVSYVEAIRGTPLIVQVMFLY 105 >gi|300693654|ref|YP_003749627.1| amino acid ABC transporter transmembrane protein [Ralstonia solanacearum PSI07] gi|299075691|emb|CBJ34988.1| amino acid ABC transporter transmembrane protein [Ralstonia solanacearum PSI07] Length = 233 Score = 86.3 bits (212), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 59/151 (39%), Positives = 86/151 (56%), Gaps = 14/151 (9%) Query: 245 HFDKPVLGQ--FNFIGGSTVSP------------EFMSLYIALSCYTAAFIAEIVRSGLI 290 H + P L Q F + G ST+ P E + +ALS AA+ +E +RSGL Sbjct: 66 HCNVPTLVQLMFWYFGISTLFPLPVLDWLGEHHSEALFAIVALSLCQAAYFSEDLRSGLR 125 Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 A+P GQ EAA ALG + A R VL+PQA+R+ +P L + ++L KNSSLA+A+G A++ Sbjct: 126 AIPPGQEEAARALGNSFIGAMRHVLMPQAVRNALPALINHSVSLFKNSSLAMAIGVAEMT 185 Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 I N + +A E L+ +YL S++I Sbjct: 186 HAVKEIENASFRAFESYLLATVMYLGFSLVI 216 >gi|282864977|ref|ZP_06274031.1| polar amino acid ABC transporter, inner membrane subunit [Streptomyces sp. ACTE] gi|282560402|gb|EFB65950.1| polar amino acid ABC transporter, inner membrane subunit [Streptomyces sp. ACTE] Length = 214 Score = 86.3 bits (212), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 47/111 (42%), Positives = 72/111 (64%), Gaps = 5/111 (4%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +AL CYT+AFI E +RSG+ VP GQ EAA +LG++ + V+LPQA RS+IPP+ S Sbjct: 89 LALGCYTSAFICEALRSGINTVPTGQGEAARSLGMSFSQTLSNVVLPQAFRSVIPPVGST 148 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 + L KNS++A A +L+ T +N+ G +I IW F+++++ +I Sbjct: 149 LIALAKNSAIAGAFSVTELLGTYKT-LNELGYSI----IWSFVWIAVGYLI 194 >gi|313885720|ref|ZP_07819469.1| putative glutamine ABC transporter, permease protein GlnM [Eremococcus coleocola ACS-139-V-Col8] gi|312619085|gb|EFR30525.1| putative glutamine ABC transporter, permease protein GlnM [Eremococcus coleocola ACS-139-V-Col8] Length = 216 Score = 86.3 bits (212), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 67/216 (31%), Positives = 117/216 (54%), Gaps = 23/216 (10%) Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALK 241 T+ +A + SFV+GI +++ T H K + +YI F +P LV++ Sbjct: 19 TLLASAIALIASFVIGISMAVGQTS-----HNKLLSTITTIYIEVFR--NIPLLVIVMFF 71 Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301 Y + P+ G G + + I LS YT++F+A++V+SG+ ++P+GQ EA Sbjct: 72 YVV---VPLYG-IKVTG-------YQAGIIGLSLYTSSFVADVVKSGITSIPKGQKEAGF 120 Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT- 360 A GL+ + T ++LPQA+ ++P L +Q +NL+KNSS+ V D++ G I +Q+ Sbjct: 121 ASGLSQSQVTFHIVLPQAINLVLPTLGNQIINLVKNSSILAMVAGLDIMYQGDLIASQSF 180 Query: 361 ---GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393 I + L ++ I + LS+M+ + N+ AK+A Sbjct: 181 NVFSTYIIVGLFYLLITIPLSLMVKHWENQ-QAKMA 215 Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 25/67 (37%), Positives = 41/67 (61%) Query: 83 SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142 +++ L GF +T + +I + +IG + G+ S NKL++ I +Y+EVFRNIP L Sbjct: 6 QNFSDQFLAGFGHTLLASAIALIASFVIGISMAVGQTSHNKLLSTITTIYIEVFRNIPLL 65 Query: 143 VVIFFLY 149 V++ F Y Sbjct: 66 VIVMFFY 72 >gi|260463005|ref|ZP_05811208.1| polar amino acid ABC transporter, inner membrane subunit [Mesorhizobium opportunistum WSM2075] gi|259031126|gb|EEW32399.1| polar amino acid ABC transporter, inner membrane subunit [Mesorhizobium opportunistum WSM2075] Length = 255 Score = 86.3 bits (212), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 60/178 (33%), Positives = 93/178 (52%), Gaps = 30/178 (16%) Query: 182 TMDTNAKIFVFSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIFGLPTL 235 T+ +A FV + ++GIVL R+ + +A PLL FL FGLP L Sbjct: 56 TVWLSALSFVGALIVGIVLCAMGLQRGWLFRVPAKAYIDAVRATPLLAQLYFLYFGLPRL 115 Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295 V PE + +ALS + A++AEI+R+G++++PRG Sbjct: 116 ------------------------GFVLPELVVGILALSLNSGAYVAEIIRAGILSIPRG 151 Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353 Q+EA++A G+T+ + RLV+LPQA + IPPL Q + L+K+S+L + A+L G Sbjct: 152 QVEASVASGMTYVQRMRLVVLPQAFKVTIPPLLGQAIVLVKDSALLSLISVAELTRAG 209 >gi|228906389|ref|ZP_04070273.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus thuringiensis IBL 200] gi|228853301|gb|EEM98074.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus thuringiensis IBL 200] Length = 214 Score = 86.3 bits (212), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 41/89 (46%), Positives = 66/89 (74%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +AL+ + AA I+EIVRSGL+++ +GQ+EAA + GLT+ +A ++LPQA+R ++PPL SQ Sbjct: 93 VALTIFEAAMISEIVRSGLLSIEKGQVEAARSSGLTYVQALWHIILPQALRRMVPPLVSQ 152 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQ 359 +++LLK++SLAV + +L+ I Q Sbjct: 153 FISLLKDTSLAVVISLPELMHNAQIISGQ 181 Score = 38.9 bits (89), Expect = 1.6, Method: Compositional matrix adjust. Identities = 21/61 (34%), Positives = 37/61 (60%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G + T +A ++ + IIG+++G R +V+ + + VEV RN+P L++IFF Sbjct: 15 LLKGLLITLEVALVAIVLSFIIGSVIGILRYMKIPVVSQVLGIIVEVIRNLPLLLIIFFT 74 Query: 149 Y 149 Y Sbjct: 75 Y 75 >gi|20089671|ref|NP_615746.1| glutamine ABC transporter, permease protein [Methanosarcina acetivorans C2A] gi|19914598|gb|AAM04226.1| glutamine ABC transporter, permease protein [Methanosarcina acetivorans C2A] Length = 213 Score = 86.3 bits (212), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 44/124 (35%), Positives = 80/124 (64%) Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333 S + A+ AEI+R+G+ +V RGQMEAA +LG+T +A + V++PQA+R IIPPL ++++ Sbjct: 88 SINSGAYNAEIIRAGIKSVDRGQMEAARSLGMTEGQAMKEVVMPQAVRLIIPPLGNEFIA 147 Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393 LLK+SSL + +L G +++T A + F+YL+L++ I+ + + ++ Sbjct: 148 LLKDSSLLAIISVHELAKNGMLYVSKTFAAFPTYISVAFVYLALTMGISHILGYIERRLG 207 Query: 394 LKEK 397 + ++ Sbjct: 208 VSDR 211 >gi|50122459|ref|YP_051626.1| amino acid ABC transporter [Pectobacterium atrosepticum SCRI1043] gi|49612985|emb|CAG76436.1| amino acid ABC transporter [Pectobacterium atrosepticum SCRI1043] Length = 254 Score = 86.3 bits (212), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 41/133 (30%), Positives = 79/133 (59%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+S +A++ A+++EI R+G+ ++ RGQMEA+ +LG+++ + R V+LPQA R ++P Sbjct: 122 FLSCVVAITLNAGAYVSEIFRAGIQSIDRGQMEASRSLGMSYGRTMRKVILPQAFRRMLP 181 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PL + + ++K+SSLA A+G ADL T+ E L +Y ++ +++L + Sbjct: 182 PLGNNAIAIVKDSSLASAIGLADLAYAARTVSGAYATYWEPYLAISIVYWVITFLLSLLV 241 Query: 386 NRLNAKIALKEKK 398 + + + + Sbjct: 242 RHMEMRFGKSDSR 254 >gi|18309583|ref|NP_561517.1| amino acid ABC transporter [Clostridium perfringens str. 13] gi|18144260|dbj|BAB80307.1| probable amino acid ABC transporter [Clostridium perfringens str. 13] Length = 223 Score = 86.3 bits (212), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 60/196 (30%), Positives = 109/196 (55%), Gaps = 16/196 (8%) Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALK 241 T+ +A + +LG +L F K + + Y+ +I G P L+ I Sbjct: 23 TLIISAITVILGALLGTILCFMKRSKFSIFKVKILRVISTAYVE--VIRGTPLLLQI--- 77 Query: 242 YQLHFDKPVLG-QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300 Y ++F P G Q + +S IA+S +AA+++EI+R+G+ AV +GQ+EAA Sbjct: 78 YIVYFGLPSFGIQLEVL---------LSCIIAISLNSAAYVSEIIRAGIDAVDKGQLEAA 128 Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 +LG+T A RL++LPQA+++I+P + ++++ ++K SS+A +G A+L+ + T Sbjct: 129 RSLGMTEGMAMRLIILPQAIKNILPAIGNEFVAIIKESSMASTIGVAELMYSSKIVTGAT 188 Query: 361 GQAIE-IILIWMFIYL 375 + E +I+I MF ++ Sbjct: 189 YKGFEPLIVIAMFYFV 204 >gi|229095294|ref|ZP_04226286.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus Rock3-29] gi|229101402|ref|ZP_04232146.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus Rock3-28] gi|229114243|ref|ZP_04243664.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus Rock1-3] gi|228669263|gb|EEL24684.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus Rock1-3] gi|228682107|gb|EEL36240.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus Rock3-28] gi|228688153|gb|EEL42039.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus Rock3-29] Length = 214 Score = 86.3 bits (212), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 41/89 (46%), Positives = 66/89 (74%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +AL+ + AA I+EIVRSGL+++ +GQ+EAA + GLT+ +A ++LPQA+R ++PPL SQ Sbjct: 93 VALTIFEAAMISEIVRSGLLSIEKGQIEAARSSGLTYVQALWHIILPQALRRMVPPLVSQ 152 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQ 359 +++LLK++SLAV + +L+ I Q Sbjct: 153 FISLLKDTSLAVVISLPELMHNAQIISGQ 181 Score = 40.8 bits (94), Expect = 0.34, Method: Compositional matrix adjust. Identities = 23/61 (37%), Positives = 38/61 (62%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G + T +A ++ + IIG+++G R + +V+ I V VEV RN+P L++IFF Sbjct: 15 LLKGLLITLEVALVAIVLSFIIGSVIGILRYTKIPVVSQILGVIVEVIRNLPLLLIIFFT 74 Query: 149 Y 149 Y Sbjct: 75 Y 75 >gi|296138522|ref|YP_003645765.1| polar amino acid ABC transporter inner membrane subunit [Tsukamurella paurometabola DSM 20162] gi|296026656|gb|ADG77426.1| polar amino acid ABC transporter, inner membrane subunit [Tsukamurella paurometabola DSM 20162] Length = 483 Score = 86.3 bits (212), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 58/164 (35%), Positives = 91/164 (55%), Gaps = 16/164 (9%) Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV-LIAL 240 T+ T + SFV+G+ ++L L+R + + L YIS +I G P LV L+ + Sbjct: 281 TVTTTIPLTAISFVIGLAIAL-GVALARMSKRRAVRGLARAYIS--IIRGTPLLVQLVII 337 Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300 Y L + G + P F++ +A S + AEI+R+ + AVPRGQ EAA Sbjct: 338 FYGLP-----------LAGVVIDP-FLAAAVAFSLNVGGYAAEIIRAAIGAVPRGQWEAA 385 Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344 +G+ +R A R ++LPQA R+ PPL + ++LLK++SLA A+ Sbjct: 386 TTIGMDYRTALRRIILPQAARTATPPLANTLVSLLKDTSLASAI 429 >gi|168183031|ref|ZP_02617695.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Clostridium botulinum Bf] gi|237794466|ref|YP_002862018.1| amino acid ABC transporter permease [Clostridium botulinum Ba4 str. 657] gi|182673740|gb|EDT85701.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Clostridium botulinum Bf] gi|229261625|gb|ACQ52658.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Clostridium botulinum Ba4 str. 657] Length = 222 Score = 86.3 bits (212), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 39/88 (44%), Positives = 67/88 (76%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P +M++ IALS +A++AEI+R ++++ +GQMEA+++LG+T +A + ++LPQA R Sbjct: 90 PAYMAVVIALSMNGSAYMAEIIRGAIMSIDKGQMEASLSLGMTEFQAMKRIILPQAARVA 149 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVS 351 IP L + +++LLK+SSLA VG A+++S Sbjct: 150 IPSLGNSFIDLLKSSSLAFTVGVAEILS 177 >gi|307265618|ref|ZP_07547172.1| polar amino acid ABC transporter, inner membrane subunit [Thermoanaerobacter wiegelii Rt8.B1] gi|326389622|ref|ZP_08211188.1| polar amino acid ABC transporter, inner membrane subunit [Thermoanaerobacter ethanolicus JW 200] gi|306919416|gb|EFN49636.1| polar amino acid ABC transporter, inner membrane subunit [Thermoanaerobacter wiegelii Rt8.B1] gi|325994337|gb|EGD52763.1| polar amino acid ABC transporter, inner membrane subunit [Thermoanaerobacter ethanolicus JW 200] Length = 220 Score = 86.3 bits (212), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 50/131 (38%), Positives = 81/131 (61%), Gaps = 4/131 (3%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P F + AL+ +AA++AEI+R+G+ AV GQ EAA +LG+TH A R V++PQA+++I Sbjct: 86 PAFTAGVSALAINSAAYVAEIIRAGIQAVDPGQNEAARSLGMTHAMAMRYVIIPQAIKNI 145 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL----SI 379 +P L ++++ +LK S++ +GFADL I + T + E +I IY + S Sbjct: 146 LPALGNEFIVMLKESAIVSVIGFADLTRQADIIQSITYKYFEPYIIIAAIYFVMTFIFSR 205 Query: 380 MIALFMNRLNA 390 ++ +F RL A Sbjct: 206 LLGIFERRLRA 216 >gi|255973159|ref|ZP_05423745.1| amino acid ABC transporter permease [Enterococcus faecalis T1] gi|255976202|ref|ZP_05426788.1| amino acid ABC transporter permease [Enterococcus faecalis T2] gi|255964177|gb|EET96653.1| amino acid ABC transporter permease [Enterococcus faecalis T1] gi|255969074|gb|EET99696.1| amino acid ABC transporter permease [Enterococcus faecalis T2] Length = 235 Score = 86.3 bits (212), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 60/159 (37%), Positives = 88/159 (55%), Gaps = 11/159 (6%) Query: 247 DKPVLGQF--NFIGGSTVSP--EFMSLYIALSC---YTAAFIAEIVRSGLIAVPRGQMEA 299 + P+L QF + G +SP F IA+ C Y A+I+E+VRSG+ AVPRGQ EA Sbjct: 77 NTPLLIQFIVVYYGFPLLSPLLSFSITTIAILCVGLYHGAYISEVVRSGIGAVPRGQFEA 136 Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359 A + GLT+ + R V+LPQA R ++PPLT+Q +NL+KN+S + AD++ + + Sbjct: 137 AYSQGLTYGQTMRYVILPQAWRIMLPPLTNQVVNLIKNTSTVAIISGADVMFAANSWSSV 196 Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 I + F+Y L +A L K+ K KK Sbjct: 197 NLNYIPAFALAGFLYFILCFPLA----NLARKMEEKNKK 231 >gi|228963739|ref|ZP_04124881.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus thuringiensis serovar sotto str. T04001] gi|228795975|gb|EEM43441.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus thuringiensis serovar sotto str. T04001] Length = 214 Score = 86.3 bits (212), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 59/172 (34%), Positives = 94/172 (54%), Gaps = 37/172 (21%) Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247 KI V S VLGI++ + + LPLL I F F LP LK ++ Sbjct: 47 KIPVVSQVLGIIVEVI-------------RNLPLLLIIFFTYFALPEA---GLKLEI--- 87 Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307 +++ +AL+ + AA I+EIVRSGL+++ +GQ+EAA + GLT+ Sbjct: 88 ------------------IIAVIVALTIFEAAMISEIVRSGLLSIEKGQIEAARSSGLTY 129 Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359 +A ++LPQA+R ++PPL SQ+++LLK+++LAV + +L+ I Q Sbjct: 130 VQALWHIILPQALRRMVPPLVSQFISLLKDTALAVVISLPELMHNAQIISGQ 181 Score = 38.5 bits (88), Expect = 1.8, Method: Compositional matrix adjust. Identities = 21/61 (34%), Positives = 37/61 (60%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G + T +A ++ + IIG+++G R +V+ + + VEV RN+P L++IFF Sbjct: 15 LLKGLLITLEVALVAIVLSFIIGSVIGILRYMKIPVVSQVLGIIVEVIRNLPLLLIIFFT 74 Query: 149 Y 149 Y Sbjct: 75 Y 75 >gi|226951613|ref|ZP_03822077.1| ABC glutamate/aspartate transporter, inner membrane subunit GltJ [Acinetobacter sp. ATCC 27244] gi|294651270|ref|ZP_06728596.1| glutamate/aspartate ABC superfamily ATP binding cassette transporter, membrane protein [Acinetobacter haemolyticus ATCC 19194] gi|226837643|gb|EEH70026.1| ABC glutamate/aspartate transporter, inner membrane subunit GltJ [Acinetobacter sp. ATCC 27244] gi|292822836|gb|EFF81713.1| glutamate/aspartate ABC superfamily ATP binding cassette transporter, membrane protein [Acinetobacter haemolyticus ATCC 19194] Length = 247 Score = 86.3 bits (212), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 57/181 (31%), Positives = 101/181 (55%), Gaps = 13/181 (7%) Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL---HF 246 + + +LG +L + R KT +A+ Y++ F +P L+ + + + + Sbjct: 40 WTIAMLLGSILGIM-----RTLPNKTARAIGTAYVTLFR--NVPLLIQLFIWFYVVPNFL 92 Query: 247 DKPVLGQF-NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305 P+ + + +G +T + +S I L +TAA + E VR+G+ A+P+GQ+ A A+G Sbjct: 93 PAPIKNWWMSDLGANTTA--LISASIGLGLFTAARVCEQVRTGIEALPQGQINAGYAMGF 150 Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365 + + R V+LPQ+ R+I+PPL+S+ N +KN+S+A VG A+++S TI T IE Sbjct: 151 STAQLYRYVILPQSFRTILPPLSSELTNCVKNTSVASLVGVAEIISQMKTISEYTQNTIE 210 Query: 366 I 366 I Sbjct: 211 I 211 Score = 36.6 bits (83), Expect = 6.9, Method: Compositional matrix adjust. Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 6/81 (7%) Query: 82 DSSYATAILVGFVNTFWLAFSGMIPATI---IGTLVGAGRLSANKLVAWICRVYVEVFRN 138 D++Y ++ G WL ++ TI +G+++G R NK I YV +FRN Sbjct: 18 DTTYLNWVVTGL---GWLVVIAVVAWTIAMLLGSILGIMRTLPNKTARAIGTAYVTLFRN 74 Query: 139 IPPLVVIFFLYKSVLSVLPIP 159 +P L+ +F + V + LP P Sbjct: 75 VPLLIQLFIWFYVVPNFLPAP 95 >gi|254512963|ref|ZP_05125029.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Rhodobacteraceae bacterium KLH11] gi|221532962|gb|EEE35957.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Rhodobacteraceae bacterium KLH11] Length = 280 Score = 86.3 bits (212), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 40/126 (31%), Positives = 84/126 (66%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + L+ + +A I+EI R+G+ A+P GQ EAA ++G++ +A R ++LPQ++R ++PP+T + Sbjct: 155 LTLAVFHSALISEIFRAGINAIPSGQWEAAKSIGMSTPQAYRYIILPQSVRFMLPPMTGE 214 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++L+K+S++ + A+L + G II+ T + EI +YL +++++++ ++ L Sbjct: 215 VVHLIKSSAIVSVIAVAELTTFGRNIISDTYMSFEIWFTIALVYLVVTLILSIGVSHLEK 274 Query: 391 KIALKE 396 K A+ + Sbjct: 275 KYAVDQ 280 >gi|116494831|ref|YP_806565.1| ABC-type amino acid transport system, permease and periplasmic component [Lactobacillus casei ATCC 334] gi|116104981|gb|ABJ70123.1| amino acid ABC transporter membrane protein, PAAT family / amino acid ABC transporter substrate-binding protein, PAAT family [Lactobacillus casei ATCC 334] Length = 485 Score = 86.3 bits (212), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 46/130 (35%), Positives = 83/130 (63%), Gaps = 4/130 (3%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P ++ IA+S +AA++AEI+RSG+ ++P GQ EAA +LGL+ R+ V+LPQA+++I Sbjct: 353 PALIAGLIAVSLNSAAYVAEIIRSGIDSIPVGQTEAARSLGLSERQTMISVVLPQAIKNI 412 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY----LSLSI 379 P L +++++L+K SS+ +G DL+ + T + ++ IL+ M +Y LS Sbjct: 413 WPALGNEFISLIKESSIVSIIGVTDLIYQLTVVQTATYKGVQPILVAMALYFVLTFGLSK 472 Query: 380 MIALFMNRLN 389 +++ F ++N Sbjct: 473 LLSHFERKMN 482 >gi|46579088|ref|YP_009896.1| His/Glu/Gln/Arg/opine ABC transporter permease [Desulfovibrio vulgaris str. Hildenborough] gi|46448501|gb|AAS95155.1| ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Desulfovibrio vulgaris str. Hildenborough] Length = 271 Score = 86.3 bits (212), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 56/152 (36%), Positives = 89/152 (58%), Gaps = 10/152 (6%) Query: 247 DKPVLGQFNFIGGSTVSPEF-----MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301 + P+L Q F+ ++P F S +AL + A++AEI+R+G+ AVP+GQ EA+ Sbjct: 118 NTPLLVQL-FVTYFAIAPVFGLGRMASAVMALGVFEGAYMAEILRAGIAAVPQGQWEASR 176 Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361 +LG+ V+LPQA+R +PPLT Q ++L+K+SSLA A+ +L TII +T Sbjct: 177 SLGMDEPGTYVQVILPQALRRALPPLTGQAVSLVKDSSLASAIAIHELTMQAQTIIAETF 236 Query: 362 QAIEIIL----IWMFIYLSLSIMIALFMNRLN 389 E+ L I++ + LSLS + L R++ Sbjct: 237 LTFEVWLLTAAIYLCVTLSLSAVARLLERRMH 268 >gi|328471192|gb|EGF42094.1| putative amino acid ABC transporter permease [Vibrio parahaemolyticus 10329] Length = 246 Score = 86.3 bits (212), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 55/181 (30%), Positives = 96/181 (53%), Gaps = 29/181 (16%) Query: 192 FSFVLGIVLSLFATRLS------RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH 245 F+ LG++++L A S + + +++P+L + ++ +G+P L+ ++L + Sbjct: 58 FAMTLGLLIALPALSRSPTLKWMNRIYVEVIRSIPVLVLLLWVYYGMPALLDVSLNH--- 114 Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305 F + IAL+ +AF+AE+ R G+ A+ RGQ EAA +LGL Sbjct: 115 --------------------FWAGVIALTIAESAFMAEVFRGGIQAINRGQHEAAESLGL 154 Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365 + + RLV+LPQA R I+PPL +Q++ +LK SSL +G +DL ++ +E Sbjct: 155 NYWQKMRLVILPQAFRQILPPLGNQFVYILKMSSLVSVIGLSDLTRRANELVVNEYLPLE 214 Query: 366 I 366 I Sbjct: 215 I 215 Score = 44.3 bits (103), Expect = 0.038, Method: Compositional matrix adjust. Identities = 23/70 (32%), Positives = 43/70 (61%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 ++ GF +T ++F M A +G L+ LS + + W+ R+YVEV R+IP LV++ ++ Sbjct: 41 LVAGFNDTIQVSFLSMCFAMTLGLLIALPALSRSPTLKWMNRIYVEVIRSIPVLVLLLWV 100 Query: 149 YKSVLSVLPI 158 Y + ++L + Sbjct: 101 YYGMPALLDV 110 >gi|118444342|ref|YP_877030.1| amino acid ABC transporter, permease protein [Clostridium novyi NT] gi|118134798|gb|ABK61842.1| amino acid ABC transporter, permease protein [Clostridium novyi NT] Length = 232 Score = 86.3 bits (212), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 64/188 (34%), Positives = 104/188 (55%), Gaps = 23/188 (12%) Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATR-------LSRHFHEKTGKALPLL 222 FLN G++ L++ T +FS +LG + +L +S F E + PLL Sbjct: 15 FLNGAGITI-VLSLIT----VIFSSILGTIFALMKLSKIKILKVISNVFIEIV-RGTPLL 68 Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282 +G+PTL+ A D V+G +F G + I L+ + A++A Sbjct: 69 VQVYIFYYGIPTLLQNAGVELPQID--VMGN-DFTG-------LCMIVITLALNSTAYVA 118 Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342 EI+RSG+ +V +GQMEAA +LGLTHR A R V++PQA+++I+P L ++++ ++K SS+ Sbjct: 119 EIIRSGIESVNKGQMEAARSLGLTHRMAMRYVIIPQAIKNILPALGNEFITVIKESSIVS 178 Query: 343 AVGFADLV 350 VG +L+ Sbjct: 179 VVGIKELM 186 >gi|15675263|ref|NP_269437.1| hypothetical protein SPy_1315 [Streptococcus pyogenes M1 GAS] gi|13622436|gb|AAK34158.1| hypothetical protein SPy_1315 [Streptococcus pyogenes M1 GAS] Length = 724 Score = 86.3 bits (212), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 50/149 (33%), Positives = 85/149 (57%), Gaps = 21/149 (14%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP--EFMSLYIALS 274 + +PL+ ++ F+ +G+P L+ +Q SP +F++ IALS Sbjct: 565 RGIPLMIVAAFIFWGVPNLIESMTGHQ-------------------SPINDFLAATIALS 605 Query: 275 CYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNL 334 A+IAEIVR G+ AVP GQMEA+ +LGL++ R V+LPQA++ ++P +Q++ Sbjct: 606 LNGGAYIAEIVRGGIEAVPAGQMEASRSLGLSYGTTMRKVILPQAVKLMLPNFINQFVIS 665 Query: 335 LKNSSLAVAVGFADLVSVGGTIINQTGQA 363 LK++++ A+G +L G II + Q+ Sbjct: 666 LKDTTIVSAIGLVELFQTGKIIIARNYQS 694 >gi|307706378|ref|ZP_07643190.1| binding-protein-dependent transport system inner membrane component family protein [Streptococcus mitis SK321] gi|307709103|ref|ZP_07645562.1| binding-protein-dependent transport system inner membrane component family protein [Streptococcus mitis SK564] gi|307618296|gb|EFN97451.1| binding-protein-dependent transport system inner membrane component family protein [Streptococcus mitis SK321] gi|307620049|gb|EFN99166.1| binding-protein-dependent transport system inner membrane component family protein [Streptococcus mitis SK564] Length = 227 Score = 86.3 bits (212), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 58/208 (27%), Positives = 117/208 (56%), Gaps = 17/208 (8%) Query: 195 VLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF---GLPTLVLIALKYQL-HFDKPV 250 +LG+VL+ F +++ K PL++++ ++ G P +V I + + L H + P Sbjct: 33 ILGVVLA---------FGQRS-KFKPLVWLANLYVWIFRGTPMMVQIMIAFALMHINAPT 82 Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 + Q +G + + +S + A+++E VR+G+ AVP+GQ+EAA +LG+ + A Sbjct: 83 I-QVGILGVDL--SRLIPGILIISMNSGAYVSETVRAGINAVPKGQLEAAYSLGIRPKNA 139 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370 R V+LPQA+++I+P L ++++ ++K+SSL A+G +L + T+ T + +L Sbjct: 140 MRYVILPQAIKNILPALGNEFITIIKDSSLLSAIGVMELWNGATTVSTTTYLPLTPLLFA 199 Query: 371 MFIYLSLSIMIALFMNRLNAKIALKEKK 398 F YL ++ ++ + + ++ +KK Sbjct: 200 AFYYLIMTSILTVALKAFEKRMGQGDKK 227 >gi|323529256|ref|YP_004231408.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia sp. CCGE1001] gi|323386258|gb|ADX58348.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. CCGE1001] Length = 216 Score = 86.3 bits (212), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 40/101 (39%), Positives = 67/101 (66%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + + LS Y A+IAE+ RSG+ AVP+GQ E + LGL+ + V+LPQ + ++P Sbjct: 86 FAAGVVGLSVYQGAYIAEVFRSGIEAVPKGQWEVSQILGLSKTQTFFSVILPQTGKIVMP 145 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 PL QYL+L+K++S+ +G ++L+ G I+++ G+ +EI Sbjct: 146 PLIGQYLSLIKDTSIVSMIGMSELMHGGQAIVDRVGKPVEI 186 >gi|301052296|ref|YP_003790507.1| ABC transporter permease [Bacillus anthracis CI] gi|300374465|gb|ADK03369.1| ABC transporter, permease; probable glutamine ABC transporter, permease [Bacillus cereus biovar anthracis str. CI] Length = 214 Score = 86.3 bits (212), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 41/89 (46%), Positives = 66/89 (74%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +AL+ + AA I+EIVRSGL+++ +GQ+EAA + GLT+ +A ++LPQA+R ++PPL SQ Sbjct: 93 VALTIFEAAMISEIVRSGLLSIEKGQIEAARSSGLTYVQALWHIILPQALRRMVPPLVSQ 152 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQ 359 +++LLK++SLAV + +L+ I Q Sbjct: 153 FISLLKDTSLAVVISLPELMHNAQIISGQ 181 Score = 40.0 bits (92), Expect = 0.73, Method: Compositional matrix adjust. Identities = 23/61 (37%), Positives = 37/61 (60%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G + T +A +I + IIG+++G R +V+ I + VEV RN+P L++IFF Sbjct: 15 LLKGLLITLEVALVAIILSFIIGSVIGILRYMKIPVVSQILGIIVEVIRNLPLLLIIFFT 74 Query: 149 Y 149 Y Sbjct: 75 Y 75 >gi|328554364|gb|AEB24856.1| glutamine ABC transporter (permease) [Bacillus amyloliquefaciens TA208] gi|328912768|gb|AEB64364.1| glutamine ABC transporter (permease) [Bacillus amyloliquefaciens LL3] Length = 218 Score = 86.3 bits (212), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 58/181 (32%), Positives = 101/181 (55%), Gaps = 27/181 (14%) Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273 +T + LPLL I F F LP I +K + I + ++ AL Sbjct: 60 ETIRNLPLLLIIFFTFFALPE---IGIKLE-------------ITAAAIT--------AL 95 Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333 + + +A ++EI+RSGL +V +GQ+EAA + GLT+ + LV++PQA+R ++PP+ SQ+++ Sbjct: 96 TIFESAMLSEIIRSGLQSVEKGQIEAARSSGLTYTQTLFLVVMPQALRRMVPPIVSQFIS 155 Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQT---GQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 LLK++SLAV + +L+ + Q+ G I L+ +Y +++ ++L RL A Sbjct: 156 LLKDTSLAVVIALPELIHNAQILNGQSADGGYFFPIFLLAALMYFAVNYSLSLAARRLEA 215 Query: 391 K 391 + Sbjct: 216 R 216 >gi|228937880|ref|ZP_04100508.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228970761|ref|ZP_04131401.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228977336|ref|ZP_04137731.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus thuringiensis Bt407] gi|228782313|gb|EEM30496.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus thuringiensis Bt407] gi|228788886|gb|EEM36825.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228821786|gb|EEM67786.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus thuringiensis serovar berliner ATCC 10792] Length = 214 Score = 86.3 bits (212), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 41/89 (46%), Positives = 66/89 (74%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +AL+ + AA I+EIVRSGL+++ +GQ+EAA + GLT+ +A ++LPQA+R ++PPL SQ Sbjct: 93 VALTIFEAAMISEIVRSGLLSIEKGQIEAARSSGLTYVQALWHIILPQALRRMVPPLVSQ 152 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQ 359 +++LLK++SLAV + +L+ I Q Sbjct: 153 FISLLKDTSLAVVISLPELMHNAQIISGQ 181 >gi|167758321|ref|ZP_02430448.1| hypothetical protein CLOSCI_00660 [Clostridium scindens ATCC 35704] gi|167664218|gb|EDS08348.1| hypothetical protein CLOSCI_00660 [Clostridium scindens ATCC 35704] Length = 226 Score = 86.3 bits (212), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 60/203 (29%), Positives = 105/203 (51%), Gaps = 28/203 (13%) Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF---LIFGLPTLVL 237 +T++ +F+ ++G ++ LF K PL +I+ ++ G P LV Sbjct: 20 ITLEMTVFSLIFATIIGTIVGLF----------NVSKIKPLQFIANIYIDIVRGTPLLVQ 69 Query: 238 IALKYQ-----LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292 + + Y L F P +G F + F++ + LS A++AEI+R G+ AV Sbjct: 70 VFIMYYGLTQFLQFQWPAIGGF--------TSAFVAGVVTLSFNAGAYMAEIIRGGIEAV 121 Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352 +GQMEAA +LGL +RKA ++LPQA R+++P + +Q++ LK++SL +G +L Sbjct: 122 DKGQMEAARSLGLPYRKAMWKIILPQAFRTMLPSIINQFIISLKDTSLISVIGPRELTQN 181 Query: 353 GGTIINQTGQAIEIILIWMFIYL 375 G I + ++ IW+ + L Sbjct: 182 GKII--AANSSTRVMAIWIVVAL 202 Score = 37.0 bits (84), Expect = 5.9, Method: Compositional matrix adjust. Identities = 19/46 (41%), Positives = 30/46 (65%) Query: 104 MIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 +I ATIIGT+VG +S K + +I +Y+++ R P LV +F +Y Sbjct: 29 LIFATIIGTIVGLFNVSKIKPLQFIANIYIDIVRGTPLLVQVFIMY 74 >gi|229042504|ref|ZP_04190249.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus AH676] gi|228726857|gb|EEL78069.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus AH676] Length = 214 Score = 86.3 bits (212), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 39/79 (49%), Positives = 63/79 (79%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +AL+ + AA I+EIVRSGL+++ +GQ+EAA + GLT+ +A ++LPQA+R ++PPL SQ Sbjct: 93 VALTIFEAAMISEIVRSGLLSIEKGQVEAARSSGLTYVQALWHIILPQALRRMVPPLVSQ 152 Query: 331 YLNLLKNSSLAVAVGFADL 349 +++LLK++SLAV + +L Sbjct: 153 FISLLKDTSLAVVISLPEL 171 Score = 40.0 bits (92), Expect = 0.63, Method: Compositional matrix adjust. Identities = 22/61 (36%), Positives = 38/61 (62%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G + T +A ++ + IIG+++G R + +V+ + V VEV RN+P L++IFF Sbjct: 15 LLKGLLITLEVALIAIVLSFIIGSVIGILRYTKIPVVSQVLGVIVEVIRNLPLLLIIFFT 74 Query: 149 Y 149 Y Sbjct: 75 Y 75 >gi|25010744|ref|NP_735139.1| hypothetical protein gbs0689 [Streptococcus agalactiae NEM316] gi|77410798|ref|ZP_00787156.1| amino acid ABC transporter, permease protein [Streptococcus agalactiae CJB111] gi|23095098|emb|CAD46333.1| Unknown [Streptococcus agalactiae NEM316] gi|77163177|gb|EAO74130.1| amino acid ABC transporter, permease protein [Streptococcus agalactiae CJB111] Length = 231 Score = 86.3 bits (212), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 38/95 (40%), Positives = 64/95 (67%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G + F + + + Y A+I+E++RSG+ AVP+GQ EAA+A G T + + ++LPQ Sbjct: 93 GHVMISAFFTAVLCVGLYHGAYISEVIRSGIEAVPKGQTEAALAQGFTANQTMQFIILPQ 152 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353 A+R+I+PP+T+Q +NL+KN+S + AD++ V Sbjct: 153 AVRTILPPMTNQVVNLIKNTSTVAIISGADIMFVA 187 >gi|153010586|ref|YP_001371800.1| polar amino acid ABC transporter, inner membrane subunit [Ochrobactrum anthropi ATCC 49188] gi|151562474|gb|ABS15971.1| polar amino acid ABC transporter, inner membrane subunit [Ochrobactrum anthropi ATCC 49188] Length = 323 Score = 86.3 bits (212), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 48/121 (39%), Positives = 74/121 (61%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +ALS A++ EI R+G+ ++PRGQ E A ALGL + LV LPQAMR IIPP +Q Sbjct: 196 LALSLCYGAYMTEIFRAGIESIPRGQQEGAYALGLGPSQTMWLVTLPQAMRIIIPPTGNQ 255 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++ +LK+SSL +G +L+ + T + IE+++ IY +LSI++ +L A Sbjct: 256 FIAMLKDSSLVSVIGVWELMYLARTQGQTEFRHIEMLITASMIYWALSIVLEYGQAKLEA 315 Query: 391 K 391 + Sbjct: 316 R 316 >gi|260461850|ref|ZP_05810096.1| polar amino acid ABC transporter, inner membrane subunit [Mesorhizobium opportunistum WSM2075] gi|319785375|ref|YP_004144851.1| polar amino acid ABC transporter inner membrane subunit [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|259032491|gb|EEW33756.1| polar amino acid ABC transporter, inner membrane subunit [Mesorhizobium opportunistum WSM2075] gi|317171263|gb|ADV14801.1| polar amino acid ABC transporter, inner membrane subunit [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 214 Score = 86.3 bits (212), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 67/228 (29%), Positives = 114/228 (50%), Gaps = 27/228 (11%) Query: 165 LPFGMFLNNRGLSFPTL--TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222 L +G+ R L F L T+ + SF++G V+ +++ FH + L Sbjct: 3 LDWGIIWEYRALLFQGLGTTLRISLISIALSFLIGSVVGCL--KVTAGFHLRKS-----L 55 Query: 223 YISTFLIFGLPTLV-LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281 +I +P +V L A+ Y D + G IAL+ + A+I Sbjct: 56 DTCVEVIRDIPVVVKLFAIYYAFGIDASISG-----------------VIALTLHQGAYI 98 Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341 +++V SG+ A+P GQ EA IA GL+ R+ ++LPQA+R +PPLTSQ++ ++KNSS Sbjct: 99 SDVVTSGIRALPTGQWEAGIASGLSGRQVFTRIILPQAIRITVPPLTSQFIQVVKNSSTV 158 Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 + + DL + I +T + +E + +YL L+++IA M+ + Sbjct: 159 MLIAIEDLTFMTQQIEQETFRGMEAAIAVTVLYLMLALLIAGAMSAVQ 206 >gi|196047128|ref|ZP_03114345.1| amino acid ABC transporter, permease protein [Bacillus cereus 03BB108] gi|229182976|ref|ZP_04310208.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus BGSC 6E1] gi|196021998|gb|EDX60688.1| amino acid ABC transporter, permease protein [Bacillus cereus 03BB108] gi|228600433|gb|EEK58021.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus BGSC 6E1] Length = 214 Score = 86.3 bits (212), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 41/89 (46%), Positives = 66/89 (74%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +AL+ + AA I+EIVRSGL+++ +GQ+EAA + GLT+ +A ++LPQA+R ++PPL SQ Sbjct: 93 VALTIFEAAMISEIVRSGLLSIEKGQIEAARSSGLTYVQALWHIILPQALRRMVPPLVSQ 152 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQ 359 +++LLK++SLAV + +L+ I Q Sbjct: 153 FISLLKDTSLAVVISLPELMHNAQIISGQ 181 Score = 38.9 bits (89), Expect = 1.6, Method: Compositional matrix adjust. Identities = 22/61 (36%), Positives = 37/61 (60%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G + T +A ++ + IIG++VG R +V+ + + VEV RN+P L++IFF Sbjct: 15 LLKGLLITLEVALIAIVLSFIIGSVVGILRYMKIPVVSQVLGIIVEVIRNLPLLLIIFFT 74 Query: 149 Y 149 Y Sbjct: 75 Y 75 >gi|52144669|ref|YP_082159.1| glutamine ABC transporter permease [Bacillus cereus E33L] gi|51978138|gb|AAU19688.1| ABC transporter, permease; probable glutamine ABC transporter, permease [Bacillus cereus E33L] Length = 214 Score = 86.3 bits (212), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 41/89 (46%), Positives = 66/89 (74%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +AL+ + AA I+EIVRSGL+++ +GQ+EAA + GLT+ +A ++LPQA+R ++PPL SQ Sbjct: 93 VALTIFEAAMISEIVRSGLLSIEKGQIEAARSSGLTYVQALWHIILPQALRRMVPPLVSQ 152 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQ 359 +++LLK++SLAV + +L+ I Q Sbjct: 153 FISLLKDTSLAVVISLPELMHNAQIISGQ 181 Score = 38.5 bits (88), Expect = 1.8, Method: Compositional matrix adjust. Identities = 21/61 (34%), Positives = 37/61 (60%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G + T +A ++ + IIG+++G R +V+ + + VEV RN+P L++IFF Sbjct: 15 LLKGLLITLEVALVAIVLSFIIGSVIGILRYMKIPVVSQVLGIIVEVIRNLPLLLIIFFT 74 Query: 149 Y 149 Y Sbjct: 75 Y 75 >gi|260654207|ref|ZP_05859697.1| amino acid ABC transporter, permease protein/periplasmic amino acid-binding protein, His/Glu/Gln/Arg/opine family [Jonquetella anthropi E3_33 E1] gi|260630840|gb|EEX49034.1| amino acid ABC transporter, permease protein/periplasmic amino acid-binding protein, His/Glu/Gln/Arg/opine family [Jonquetella anthropi E3_33 E1] Length = 521 Score = 86.3 bits (212), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 67/170 (39%), Positives = 95/170 (55%), Gaps = 13/170 (7%) Query: 229 IFGLPTLVLIALKY-QLHFDKPVLGQ--FNFIG----GSTVSPEFMSLYIALSCYTAAFI 281 +FG L +A+ Y +L PVL Q F F G G +SP F + I L AA+ Sbjct: 329 LFGPRWLSALAVGYIELLRGTPVLIQLFFIFYGLPNVGIKLSP-FAAGIIGLGMNYAAYE 387 Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341 AE R+GL+AVPR QME A+ALG+T +A R V++PQA+R +PP+T+ +++LLK+SSL Sbjct: 388 AENYRAGLMAVPRQQMEGALALGMTRSQALRHVVVPQAIRVSLPPVTNDFISLLKDSSLV 447 Query: 342 VAVGFADLVSVGGTIINQT----GQAIEIILIWMFIYLSLSIMIALFMNR 387 + DL G + N G I + LI+ I L + +A F R Sbjct: 448 SMITLIDLTKAYGQLANTYYDFFGIGIMVALIYFLIGLPF-VRLARFAER 496 >gi|229165585|ref|ZP_04293360.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus AH621] gi|228617892|gb|EEK74942.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus AH621] Length = 214 Score = 86.3 bits (212), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 41/89 (46%), Positives = 66/89 (74%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +AL+ + AA I+EIVRSGL+++ +GQ+EAA + GLT+ +A ++LPQA+R ++PPL SQ Sbjct: 93 VALTIFEAAMISEIVRSGLLSIEKGQIEAARSSGLTYVQALWHIILPQALRRMVPPLVSQ 152 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQ 359 +++LLK++SLAV + +L+ I Q Sbjct: 153 FISLLKDTSLAVVISLPELMHNAQIISGQ 181 Score = 38.1 bits (87), Expect = 2.2, Method: Compositional matrix adjust. Identities = 22/61 (36%), Positives = 37/61 (60%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G + T +A ++ + IIG+++G R + +V+ I VEV RN+P L++IFF Sbjct: 15 LLKGLLITLEVALIAIVLSFIIGSVIGILRYTKIPVVSQILGFIVEVIRNLPLLLIIFFT 74 Query: 149 Y 149 Y Sbjct: 75 Y 75 >gi|169334520|ref|ZP_02861713.1| hypothetical protein ANASTE_00923 [Anaerofustis stercorihominis DSM 17244] gi|169259237|gb|EDS73203.1| hypothetical protein ANASTE_00923 [Anaerofustis stercorihominis DSM 17244] Length = 217 Score = 86.3 bits (212), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 56/160 (35%), Positives = 95/160 (59%), Gaps = 7/160 (4%) Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252 S VLG++L+L +S K K + +Y T++ G P L+ I + Y F P++ Sbjct: 23 SIVLGMILALVIAFMSIG-RNKILKGIAWIY--TWVFRGTPLLLQIMVVY---FAIPLMV 76 Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312 + +G F + IAL+ TAA+ +EI R+G+ ++ +GQMEAA ALG+T+ +A Sbjct: 77 K-QMVGSPLNFEPFTAAIIALTLNTAAYTSEIFRAGIQSIDKGQMEAAKALGMTYSQAMF 135 Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352 V++PQ + +IPP ++++ +LK++SL +G ADL+ V Sbjct: 136 KVIIPQTVSRVIPPFANEFIMILKDTSLVSTIGMADLMRV 175 >gi|23465743|ref|NP_696346.1| permease protein of ABC transporter system [Bifidobacterium longum NCC2705] gi|227546355|ref|ZP_03976404.1| ABC superfamily ATP binding cassette transporter permease protein [Bifidobacterium longum subsp. infantis ATCC 55813] gi|23326428|gb|AAN24982.1| permease protein of ABC transporter system [Bifidobacterium longum NCC2705] gi|227213336|gb|EEI81208.1| ABC superfamily ATP binding cassette transporter permease protein [Bifidobacterium longum subsp. infantis ATCC 55813] Length = 327 Score = 86.3 bits (212), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 53/139 (38%), Positives = 82/139 (58%), Gaps = 1/139 (0%) Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312 +F I + V F + +I L+ AA+++EIVR+GL AV GQ EAA ALG+ R Sbjct: 144 EFWSIDSNVVVTAFNAAWIGLALNEAAYLSEIVRAGLEAVDPGQTEAAKALGMNRTLIMR 203 Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA-DLVSVGGTIINQTGQAIEIILIWM 371 ++LPQAMR IIPP ++ + +LK +SL AV F +L I N+ + I ++L+ Sbjct: 204 RIVLPQAMRIIIPPTGNETIGMLKTTSLVTAVPFTLELQFATNAIANRIYKPIPLLLVAC 263 Query: 372 FIYLSLSIMIALFMNRLNA 390 F YL ++ ++ + +RL A Sbjct: 264 FWYLLITSILMVVQSRLEA 282 >gi|322690626|ref|YP_004220196.1| ABC transporter permease [Bifidobacterium longum subsp. longum JCM 1217] gi|320455482|dbj|BAJ66104.1| putative ABC transporter permease component [Bifidobacterium longum subsp. longum JCM 1217] Length = 327 Score = 86.3 bits (212), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 53/139 (38%), Positives = 82/139 (58%), Gaps = 1/139 (0%) Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312 +F I + V F + +I L+ AA+++EIVR+GL AV GQ EAA ALG+ R Sbjct: 144 EFWSIDSNVVVTAFNAAWIGLALNEAAYLSEIVRAGLEAVDPGQTEAAKALGMNRTLIMR 203 Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA-DLVSVGGTIINQTGQAIEIILIWM 371 ++LPQAMR IIPP ++ + +LK +SL AV F +L I N+ + I ++L+ Sbjct: 204 RIVLPQAMRIIIPPTGNETIGMLKTTSLVTAVPFTLELQFATNAIANRIYKPIPLLLVAC 263 Query: 372 FIYLSLSIMIALFMNRLNA 390 F YL ++ ++ + +RL A Sbjct: 264 FWYLLITSILMVVQSRLEA 282 >gi|56421989|ref|YP_149307.1| amino acid ABC transporter permease [Geobacillus kaustophilus HTA426] gi|56381831|dbj|BAD77739.1| amino acid ABC transporter (permease) [Geobacillus kaustophilus HTA426] Length = 218 Score = 86.3 bits (212), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 41/107 (38%), Positives = 72/107 (67%) Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327 SL ++LS +AA++AEI R+G+ ++ +GQMEAA +LG+TH +A R ++LPQA++ +IPP Sbjct: 91 SLAVSLSLNSAAYVAEIFRAGIQSIDKGQMEAARSLGMTHAQAMRYIILPQALKRMIPPF 150 Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374 ++++ L+K+SSL + + +++ G + + E L FIY Sbjct: 151 ANEFIVLIKDSSLGMVIAAPEIMYWGKAAAGEYYRVWEPYLTVAFIY 197 >gi|328957593|ref|YP_004374979.1| high affinity arginine ABC transporter binding lipoprotein [Carnobacterium sp. 17-4] gi|328673917|gb|AEB29963.1| high affinity arginine ABC transporter binding lipoprotein [Carnobacterium sp. 17-4] Length = 507 Score = 86.3 bits (212), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 43/129 (33%), Positives = 80/129 (62%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P S IA+S +AA+I EI+RSGL +VP+GQ EAA +LG++ + + R ++ PQA+++I Sbjct: 376 PALASGIIAVSLNSAAYICEIIRSGLNSVPKGQAEAARSLGMSKKISMRQIIFPQALKNI 435 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 P L ++++ ++K SS+ +G +DL+ + + + + I +++ M IY L+ + Sbjct: 436 WPALGNEFITVIKESSIVSIIGVSDLIFQTKVVTSVSYRGIAPLVVTMIIYFILTFSLTK 495 Query: 384 FMNRLNAKI 392 +N K+ Sbjct: 496 LLNHYEGKM 504 Score = 36.2 bits (82), Expect = 8.3, Method: Compositional matrix adjust. Identities = 17/53 (32%), Positives = 32/53 (60%), Gaps = 4/53 (7%) Query: 111 GTLVGAG----RLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIP 159 G+++G G R+S NK++ ++ YVE R P ++ + F+Y +V ++ IP Sbjct: 324 GSILGIGLSFMRMSKNKIMHFVATAYVEFVRGTPMMIQVMFIYFAVGYLINIP 376 >gi|241763925|ref|ZP_04761968.1| polar amino acid ABC transporter, inner membrane subunit [Acidovorax delafieldii 2AN] gi|241366820|gb|EER61252.1| polar amino acid ABC transporter, inner membrane subunit [Acidovorax delafieldii 2AN] Length = 222 Score = 86.3 bits (212), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 62/205 (30%), Positives = 111/205 (54%), Gaps = 13/205 (6%) Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247 +I S +LG V+ L + + AL Y++ I G P LV + + L F Sbjct: 24 EITAASLLLGCVMGLLVGIGRLNPKRRVVYALCTAYVAA--IRGTPLLVQL---FILFFG 78 Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307 P QF + P F+ I L Y+ A+++E+VR + ++ +GQMEAA ++G++ Sbjct: 79 LP---QFGIL-----LPAFVCGVIGLGIYSGAYVSEVVRGAIQSIDKGQMEAARSIGMSS 130 Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367 A R V+LPQA+ +IPPL ++++ L+KNS+L + DL+ G II+ + +++E+ Sbjct: 131 GLAMRTVVLPQAVVRMIPPLGNEFIALIKNSALVSLLTIHDLMHEGQKIISVSYRSLEVY 190 Query: 368 LIWMFIYLSLSIMIALFMNRLNAKI 392 L +Y L+ + +L + R+ ++ Sbjct: 191 LAIAVVYFILTGVTSLVLRRMELRL 215 Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust. Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 7/79 (8%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAW-ICRVYVEVFRNIPPLVVIFF 147 +L G V T + + ++ ++G LVG GRL+ + V + +C YV R P LV +F Sbjct: 15 LLAGAVVTVEITAASLLLGCVMGLLVGIGRLNPKRRVVYALCTAYVAAIRGTPLLVQLFI 74 Query: 148 LYKSVLSVLPIPDHSIVLP 166 L+ +P I+LP Sbjct: 75 LF------FGLPQFGILLP 87 >gi|213692879|ref|YP_002323465.1| transcriptional regulator, Fis family [Bifidobacterium longum subsp. infantis ATCC 15697] gi|213524340|gb|ACJ53087.1| transcriptional regulator, Fis family [Bifidobacterium longum subsp. infantis ATCC 15697] gi|320459053|dbj|BAJ69674.1| putative ABC transporter permease component [Bifidobacterium longum subsp. infantis ATCC 15697] Length = 327 Score = 86.3 bits (212), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 53/139 (38%), Positives = 82/139 (58%), Gaps = 1/139 (0%) Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312 +F I + V F + +I L+ AA+++EIVR+GL AV GQ EAA ALG+ R Sbjct: 144 EFWSIDSNVVVTAFNAAWIGLALNEAAYLSEIVRAGLEAVDPGQTEAAKALGMNRTLIMR 203 Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA-DLVSVGGTIINQTGQAIEIILIWM 371 ++LPQAMR IIPP ++ + +LK +SL AV F +L I N+ + I ++L+ Sbjct: 204 RIVLPQAMRIIIPPTGNETIGMLKTTSLVTAVPFTLELQFATNAIANRIYKPIPLLLVAC 263 Query: 372 FIYLSLSIMIALFMNRLNA 390 F YL ++ ++ + +RL A Sbjct: 264 FWYLLITSILMVVQSRLEA 282 >gi|296453673|ref|YP_003660816.1| Fis family transcriptional regulator [Bifidobacterium longum subsp. longum JDM301] gi|296183104|gb|ADG99985.1| transcriptional regulator, Fis family [Bifidobacterium longum subsp. longum JDM301] Length = 331 Score = 85.9 bits (211), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 53/139 (38%), Positives = 82/139 (58%), Gaps = 1/139 (0%) Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312 +F I + V F + +I L+ AA+++EIVR+GL AV GQ EAA ALG+ R Sbjct: 144 EFWSIDSNVVVTAFNAAWIGLALNEAAYLSEIVRAGLEAVDPGQTEAAKALGMNRTLIMR 203 Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA-DLVSVGGTIINQTGQAIEIILIWM 371 ++LPQAMR IIPP ++ + +LK +SL AV F +L I N+ + I ++L+ Sbjct: 204 RIVLPQAMRIIIPPTGNETIGMLKTTSLVTAVPFTLELQFATNAIANRIYKPIPLLLVAC 263 Query: 372 FIYLSLSIMIALFMNRLNA 390 F YL ++ ++ + +RL A Sbjct: 264 FWYLLITSILMVVQSRLEA 282 >gi|271964465|ref|YP_003338661.1| polar amino acid ABC transporter inner membrane protein [Streptosporangium roseum DSM 43021] gi|270507640|gb|ACZ85918.1| polar amino acid ABC transporter, inner membrane subunit [Streptosporangium roseum DSM 43021] Length = 282 Score = 85.9 bits (211), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 46/127 (36%), Positives = 83/127 (65%), Gaps = 5/127 (3%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + L+ +A++AE +R+GL AVP+GQMEAA +LG++H +A +++PQA+R +IPP T+Q Sbjct: 154 LGLTIVGSAYMAETLRAGLQAVPKGQMEAARSLGMSHARAMTTIVIPQAVRIVIPPTTNQ 213 Query: 331 YLNLLKNSSLAVAVG----FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386 +++LLK+SSL + +G + +L G + + A I+++ + YL ++I + + Sbjct: 214 FVSLLKDSSLVLFLGVSGEYVELTKFGNDMASTFANATPILVVGV-TYLLVTIPLGYLAS 272 Query: 387 RLNAKIA 393 RL + A Sbjct: 273 RLEKRQA 279 >gi|227327467|ref|ZP_03831491.1| ABC transporter permease protein [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 131 Score = 85.9 bits (211), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 43/128 (33%), Positives = 80/128 (62%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IALS + AF AE+ R + ++ GQ E A ALG++ A R V+LPQA+R +IPP + Sbjct: 2 IALSAQSGAFYAEVYRGAISSIHAGQWEGAKALGMSKSTALRRVILPQALRRMIPPFIER 61 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 L+K++SLA ++ +++L+ I +QT + +E+ + +Y +L ++I+LF + Sbjct: 62 SFELIKSTSLASSLAYSELLYQAMQINSQTYRPLEVYSLVAVMYFTLLLLISLFSQHIEK 121 Query: 391 KIALKEKK 398 +++L +++ Sbjct: 122 RLSLADRR 129 >gi|205351949|ref|YP_002225750.1| glutamate/aspartate transport system permease GltK [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205271730|emb|CAR36563.1| glutamate/aspartate transport system permease protein GltK [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|326626988|gb|EGE33331.1| glutamate/aspartate transport system permease protein GltK [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 224 Score = 85.9 bits (211), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 43/127 (33%), Positives = 78/127 (61%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 +S +A S + AA+ +EI+R+G+ ++ RGQ AA+ALG+TH ++ +L++LPQA R++ Sbjct: 96 RLISAMVAFSMFEAAYYSEIIRAGIQSISRGQSSAALALGMTHWQSMKLIILPQAFRAMA 155 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 P L +Q + L +++SL + AD TI + G +E+IL +Y +S+ +L Sbjct: 156 PLLLTQGIVLFQDTSLVYVLSLADFFRTASTIGERDGTQVEMILFAGAVYFVISLSASLL 215 Query: 385 MNRLNAK 391 ++ L + Sbjct: 216 VSYLKKR 222 Score = 42.7 bits (99), Expect = 0.11, Method: Compositional matrix adjust. Identities = 28/92 (30%), Positives = 49/92 (53%), Gaps = 10/92 (10%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G V T + + ++ + GT++ RLS+ +AW + YV VFR+IP ++V+ + Sbjct: 16 LLAGLVITLKITVTAVVVGIVWGTILAVMRLSSFAPIAWFAKAYVNVFRSIPLVMVLLWF 75 Query: 149 Y-------KSVLSVLPIPD---HSIVLPFGMF 170 Y ++VL + P D S ++ F MF Sbjct: 76 YLIVPGFLQNVLGLSPKTDIRLISAMVAFSMF 107 >gi|194017152|ref|ZP_03055764.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Bacillus pumilus ATCC 7061] gi|194011020|gb|EDW20590.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Bacillus pumilus ATCC 7061] Length = 216 Score = 85.9 bits (211), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 54/167 (32%), Positives = 99/167 (59%), Gaps = 14/167 (8%) Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288 I LP L++I Y F P +G I S ++ AL+ + +A ++EI+RSG Sbjct: 62 IRNLPLLLIIFFTY---FALPEIGIKLSITASAIA--------ALTVFESAMLSEIIRSG 110 Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348 L ++ +GQ+EAA + GLT+ + +++++PQA+R ++PP+ SQ+++LLK++SLAV + + Sbjct: 111 LKSIDKGQIEAARSSGLTYIQTLKMIIMPQALRRMVPPIVSQFISLLKDTSLAVVIALPE 170 Query: 349 LVSVGGTIINQTGQA--IEIILIWMFIYLSLSIMIALFMNRLNAKIA 393 L+ I+N Q+ + I L+ +Y ++ ++L RL + A Sbjct: 171 LLH-HAQILNGQSQSYLLPIFLLAAMMYFVVNFSLSLLARRLEYRQA 216 Score = 42.4 bits (98), Expect = 0.14, Method: Compositional matrix adjust. Identities = 23/61 (37%), Positives = 37/61 (60%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L GF T +AF +I + +IG ++G R + +++ I V VE RN+P L++IFF Sbjct: 15 LLEGFAVTLKVAFISIILSFLIGLVIGTLRFAQIPVLSKILAVVVETIRNLPLLLIIFFT 74 Query: 149 Y 149 Y Sbjct: 75 Y 75 >gi|319407434|emb|CBI81085.1| glutamate/aspartate transport system permease protein GltJ [Bartonella sp. 1-1C] Length = 250 Score = 85.9 bits (211), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 46/129 (35%), Positives = 78/129 (60%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P + + AL +T+A IAE VRSG+ ++P GQ AA+A+G ++ R ++LP+A+R+I Sbjct: 112 PPILLIICALGFFTSARIAEQVRSGIESIPSGQRYAAMAMGFNTYQSYRYIILPRAIRTI 171 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 +PPLTS+ + ++KNSS+A AV +L+ I + E L+ +Y+ +S+ I + Sbjct: 172 MPPLTSEAMGIVKNSSIAFAVSINELMQFQYQTIEEVSHVYENYLLVTLLYIVISLFIFV 231 Query: 384 FMNRLNAKI 392 M + I Sbjct: 232 LMTIIEKAI 240 >gi|170759870|ref|YP_001787408.1| His/Glu/Gln/Arg/opine ABC transporter permease [Clostridium botulinum A3 str. Loch Maree] gi|169406859|gb|ACA55270.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Clostridium botulinum A3 str. Loch Maree] Length = 228 Score = 85.9 bits (211), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 51/182 (28%), Positives = 103/182 (56%), Gaps = 14/182 (7%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 + P+L + +GLPT I +++ + P+LG NF P+F + +ALS Sbjct: 61 RGTPVLVQLYIIYYGLPT---IGIRFP---EVPILGS-NF-------PDFFAGILALSIN 106 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 + A++AEI+R+G+ AV +GQMEAA +LG++ A + V++PQA ++I+P L ++++ ++K Sbjct: 107 SGAYVAEIIRAGIQAVDKGQMEAARSLGMSESMAMKNVIIPQAFKNILPALGNEFITIIK 166 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 SS+ +G +L+ T+ + E +L+ +Y L+ ++ + ++ + + Sbjct: 167 ESSIVSIIGIHELMYNADTVRGNIFRPFEPLLVAAVMYFILTFTLSKLLGVAERRMRVSD 226 Query: 397 KK 398 + Sbjct: 227 RN 228 >gi|206967971|ref|ZP_03228927.1| amino acid ABC transporter, permease protein [Bacillus cereus AH1134] gi|228951133|ref|ZP_04113249.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|229068327|ref|ZP_04201630.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus F65185] gi|229077955|ref|ZP_04210564.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus Rock4-2] gi|229177167|ref|ZP_04304556.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus 172560W] gi|206736891|gb|EDZ54038.1| amino acid ABC transporter, permease protein [Bacillus cereus AH1134] gi|228606348|gb|EEK63780.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus 172560W] gi|228705293|gb|EEL57670.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus Rock4-2] gi|228714788|gb|EEL66660.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus F65185] gi|228808543|gb|EEM55046.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus thuringiensis serovar kurstaki str. T03a001] Length = 214 Score = 85.9 bits (211), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 41/89 (46%), Positives = 66/89 (74%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +AL+ + AA I+EIVRSGL+++ +GQ+EAA + GLT+ +A ++LPQA+R ++PPL SQ Sbjct: 93 VALTIFEAAMISEIVRSGLLSIEKGQVEAARSSGLTYVQALWHIILPQALRRMVPPLVSQ 152 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQ 359 +++LLK++SLAV + +L+ I Q Sbjct: 153 FISLLKDTSLAVVISLPELMHNAQIISGQ 181 Score = 40.8 bits (94), Expect = 0.41, Method: Compositional matrix adjust. Identities = 23/61 (37%), Positives = 38/61 (62%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G + T +A ++ + IIG+++G R + +V+ I V VEV RN+P L++IFF Sbjct: 15 LLKGLLITLEVALIAIVLSFIIGSVIGILRYTKIPVVSQILGVIVEVIRNLPLLLIIFFT 74 Query: 149 Y 149 Y Sbjct: 75 Y 75 >gi|30018827|ref|NP_830458.1| glutamine transport system permease protein glnP [Bacillus cereus ATCC 14579] gi|229108251|ref|ZP_04237873.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus Rock1-15] gi|229126073|ref|ZP_04255095.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus BDRD-Cer4] gi|229143369|ref|ZP_04271800.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus BDRD-ST24] gi|296501402|ref|YP_003663102.1| glutamine transport system permease GlnP [Bacillus thuringiensis BMB171] gi|29894369|gb|AAP07659.1| Glutamine transport system permease protein glnP [Bacillus cereus ATCC 14579] gi|228640176|gb|EEK96575.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus BDRD-ST24] gi|228657395|gb|EEL13211.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus BDRD-Cer4] gi|228675267|gb|EEL30489.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus Rock1-15] gi|296322454|gb|ADH05382.1| glutamine transport system permease protein glnP [Bacillus thuringiensis BMB171] Length = 214 Score = 85.9 bits (211), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 41/89 (46%), Positives = 66/89 (74%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +AL+ + AA I+EIVRSGL+++ +GQ+EAA + GLT+ +A ++LPQA+R ++PPL SQ Sbjct: 93 VALTIFEAAMISEIVRSGLLSIEKGQVEAARSSGLTYVQALWHIILPQALRRMVPPLVSQ 152 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQ 359 +++LLK++SLAV + +L+ I Q Sbjct: 153 FISLLKDTSLAVVISLPELMHNAQIISGQ 181 Score = 40.0 bits (92), Expect = 0.62, Method: Compositional matrix adjust. Identities = 22/61 (36%), Positives = 38/61 (62%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G + T +A ++ + IIG+++G R + +V+ + V VEV RN+P L++IFF Sbjct: 15 LLKGLLITLEVALIAIVLSFIIGSVIGILRYTKIPVVSQVLGVIVEVIRNLPLLLIIFFT 74 Query: 149 Y 149 Y Sbjct: 75 Y 75 >gi|50123384|ref|YP_052551.1| binding-protein-dependent transport system inner membrane component [Pectobacterium atrosepticum SCRI1043] gi|49613910|emb|CAG77363.1| binding-protein-dependent transport system inner membrane component [Pectobacterium atrosepticum SCRI1043] Length = 242 Score = 85.9 bits (211), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 57/223 (25%), Positives = 115/223 (51%), Gaps = 11/223 (4%) Query: 177 SFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV 236 +FP + A V S + G+ ++ T L G LL + +P ++ Sbjct: 17 TFPDGPLGGAALTLVMSLLAGVASAVLGTILGVALAMSRGGWSALLAMVLGFFRAIPVIM 76 Query: 237 LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296 LI + +F P++ + PE ++ AL+ +A++A V++G++A+ RGQ Sbjct: 77 LI---FWTYFLLPIVFGVDI-------PEITTVVCALALIASAYLAHGVKAGIVAIGRGQ 126 Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356 +A ++LGL+ + ++LPQA+R ++P +Q+++L+K++SLA VG +L + + Sbjct: 127 WQAGLSLGLSRWQVLWQIVLPQALRMMVPSFINQWISLIKDTSLAYIVGVGELTFLATQV 186 Query: 357 INQTG-QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 N++ +E+ L +Y + + L N +NA+ + +EK+ Sbjct: 187 NNRSMVYPMEVFLFVALVYFVFCLSLELLANGVNARFSQQEKQ 229 >gi|228957063|ref|ZP_04118837.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus thuringiensis serovar pakistani str. T13001] gi|228802623|gb|EEM49466.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus thuringiensis serovar pakistani str. T13001] Length = 214 Score = 85.9 bits (211), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 41/89 (46%), Positives = 66/89 (74%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +AL+ + AA I+EIVRSGL+++ +GQ+EAA + GLT+ +A ++LPQA+R ++PPL SQ Sbjct: 93 VALTIFEAAMISEIVRSGLLSIEKGQVEAARSSGLTYVQALWHIILPQALRRMVPPLVSQ 152 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQ 359 +++LLK++SLAV + +L+ I Q Sbjct: 153 FISLLKDTSLAVVISLPELMHNAQIISGQ 181 Score = 39.3 bits (90), Expect = 0.96, Method: Compositional matrix adjust. Identities = 21/61 (34%), Positives = 38/61 (62%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G + T +A ++ + IIG+++G R + +V+ + + VEV RN+P L++IFF Sbjct: 15 LLKGLLITLEVALIAIVLSFIIGSVIGILRYTKIPVVSQVLGIIVEVIRNLPLLLIIFFT 74 Query: 149 Y 149 Y Sbjct: 75 Y 75 >gi|319782448|ref|YP_004141924.1| polar amino acid ABC transporter inner membrane subunit [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317168336|gb|ADV11874.1| polar amino acid ABC transporter, inner membrane subunit [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 223 Score = 85.9 bits (211), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 62/180 (34%), Positives = 95/180 (52%), Gaps = 34/180 (18%) Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHF--------HEKTGKALPLLYISTFLIFGLP 233 T+ +A FV + ++GIVL A L R + + +A PLL FL FGLP Sbjct: 24 TVWLSALSFVGALIVGIVLC--AMNLQRGWLFRAPAKAYIDAVRATPLLAQLYFLYFGLP 81 Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293 L V PE + +ALS + A+IAEI+R+G++++P Sbjct: 82 RL------------------------GFVLPELVVGILALSLNSGAYIAEIIRAGILSIP 117 Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353 RGQ+EA++A G+T+ + RLV+LPQA + IPPL Q + L+K+S+L + ++L G Sbjct: 118 RGQVEASVASGMTYVQRMRLVVLPQAFKVTIPPLLGQAIVLVKDSALLSLISVSELTRAG 177 >gi|319404433|emb|CBI78036.1| glutamate/aspartate transport system permease protein GltJ [Bartonella rochalimae ATCC BAA-1498] Length = 250 Score = 85.9 bits (211), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 46/129 (35%), Positives = 78/129 (60%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P + + AL +T+A IAE VRSG+ ++P GQ AA+A+G ++ R ++LP+A+R+I Sbjct: 112 PPILLIICALGFFTSARIAEQVRSGIESIPSGQRYAAMAMGFNTYQSYRYIILPRAIRTI 171 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 +PPLTS+ + ++KNSS+A AV +L+ I + E L+ +Y+ +S+ I + Sbjct: 172 MPPLTSEAMGIVKNSSIAFAVSINELMQFQYQTIEEVSHVYENYLLVTLLYIVISLFIFI 231 Query: 384 FMNRLNAKI 392 M + I Sbjct: 232 LMTIIERAI 240 >gi|229010073|ref|ZP_04167287.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus mycoides DSM 2048] gi|228751206|gb|EEM01018.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus mycoides DSM 2048] Length = 214 Score = 85.9 bits (211), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 41/89 (46%), Positives = 66/89 (74%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +AL+ + AA I+EIVRSGL+++ +GQ+EAA + GLT+ +A ++LPQA+R ++PPL SQ Sbjct: 93 VALTIFEAAMISEIVRSGLLSIEKGQIEAARSSGLTYVQALWHIILPQALRRMVPPLVSQ 152 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQ 359 +++LLK++SLAV + +L+ I Q Sbjct: 153 FISLLKDTSLAVVISLPELMHNAQIISGQ 181 Score = 38.1 bits (87), Expect = 2.2, Method: Compositional matrix adjust. Identities = 22/61 (36%), Positives = 37/61 (60%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G + T +A ++ + IIG+++G R + +V+ I VEV RN+P L++IFF Sbjct: 15 LLKGLLITLEVALIAIVLSFIIGSVIGILRYTKIPVVSQILGFIVEVIRNLPLLLIIFFT 74 Query: 149 Y 149 Y Sbjct: 75 Y 75 >gi|229188847|ref|ZP_04315881.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus ATCC 10876] gi|228594660|gb|EEK52445.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus ATCC 10876] Length = 214 Score = 85.9 bits (211), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 41/89 (46%), Positives = 66/89 (74%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +AL+ + AA I+EIVRSGL+++ +GQ+EAA + GLT+ +A ++LPQA+R ++PPL SQ Sbjct: 93 VALTIFEAAMISEIVRSGLLSIEKGQVEAARSSGLTYVQALWHIILPQALRRMVPPLVSQ 152 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQ 359 +++LLK++SLAV + +L+ I Q Sbjct: 153 FISLLKDTSLAVVISLPELMHNAQIISGQ 181 Score = 40.0 bits (92), Expect = 0.61, Method: Compositional matrix adjust. Identities = 22/61 (36%), Positives = 38/61 (62%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G + T +A ++ + IIG+++G R + +V+ + V VEV RN+P L++IFF Sbjct: 15 LLKGLLITLEVALIAIVLSFIIGSVIGILRYTKIPVVSQVLGVIVEVIRNLPLLLIIFFT 74 Query: 149 Y 149 Y Sbjct: 75 Y 75 >gi|307150942|ref|YP_003886326.1| polar amino acid ABC transporter inner membrane subunit [Cyanothece sp. PCC 7822] gi|306981170|gb|ADN13051.1| polar amino acid ABC transporter, inner membrane subunit [Cyanothece sp. PCC 7822] Length = 398 Score = 85.9 bits (211), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 47/123 (38%), Positives = 76/123 (61%), Gaps = 3/123 (2%) Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333 + ++AA++AE +R GL +VPRGQ EAAIALGL L++LPQA++++IP + Q+++ Sbjct: 276 TIFSAAYLAENIRGGLQSVPRGQTEAAIALGLNPLLVLGLIILPQALKAVIPTIVGQFIS 335 Query: 334 LLKNSSLAVAVGFADLVSVGGTII---NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 L K++SL VG DL+ + +I+ G+ +E+ L FIY ++L +L Sbjct: 336 LFKDTSLLAIVGLVDLLGISQSILANPKYQGRNVEVYLFIAFIYWLCCSAMSLASRKLEQ 395 Query: 391 KIA 393 K A Sbjct: 396 KPA 398 >gi|114763148|ref|ZP_01442574.1| ABC transporter permease protein [Pelagibaca bermudensis HTCC2601] gi|114544201|gb|EAU47210.1| ABC transporter permease protein [Roseovarius sp. HTCC2601] Length = 223 Score = 85.9 bits (211), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 44/93 (47%), Positives = 64/93 (68%), Gaps = 1/93 (1%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G +SP F S AL+ + A+ AEI RSG+ A+P+GQ EAA ALGL HR+ V+LPQ Sbjct: 87 GVRLSP-FASAMTALTMVSGAYTAEIFRSGIEAIPKGQFEAAAALGLGHRQTMVDVILPQ 145 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 ++R +IPPLT+ +N++K+++LA V DL+ Sbjct: 146 SIRMVIPPLTNNSINVVKDTALASVVAMPDLLK 178 >gi|111225333|ref|YP_716127.1| amino acid ABC transporter membrane protein [Frankia alni ACN14a] gi|111152865|emb|CAJ64612.1| putative amino acid transport protein (ABC superfamily, membrane) [Frankia alni ACN14a] Length = 333 Score = 85.9 bits (211), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 48/141 (34%), Positives = 86/141 (60%), Gaps = 2/141 (1%) Query: 255 NFIGGST--VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312 +F+ G + P F + + L AA++AEIVR+G+ V GQ EAA ALG++ A R Sbjct: 182 SFVSGDANHIVPLFAAAVLGLGLNEAAYMAEIVRAGINGVDAGQTEAASALGMSRALALR 241 Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372 ++LPQAMR+IIPP ++ +++LK +SL + + +L++ + +T Q I ++++ Sbjct: 242 RIVLPQAMRTIIPPTGNETISMLKTTSLVSVISYNELLNATRIVYARTFQTIPLLIVAAL 301 Query: 373 IYLSLSIMIALFMNRLNAKIA 393 YL+L+ ++ L ++L + A Sbjct: 302 WYLALTSVLTLGQHQLERRFA 322 >gi|229148980|ref|ZP_04277225.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus m1550] gi|228634520|gb|EEK91104.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus m1550] Length = 214 Score = 85.9 bits (211), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 41/89 (46%), Positives = 66/89 (74%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +AL+ + AA I+EIVRSGL+++ +GQ+EAA + GLT+ +A ++LPQA+R ++PPL SQ Sbjct: 93 VALTIFEAAMISEIVRSGLLSIEKGQVEAARSSGLTYVQALWHIILPQALRRMVPPLVSQ 152 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQ 359 +++LLK++SLAV + +L+ I Q Sbjct: 153 FISLLKDTSLAVVISLPELMHNAQIISGQ 181 Score = 40.4 bits (93), Expect = 0.54, Method: Compositional matrix adjust. Identities = 22/61 (36%), Positives = 38/61 (62%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G + T +A ++ + IIG+++G R + +V+ + V VEV RN+P L++IFF Sbjct: 15 LLKGLLITLEVALVAIVLSFIIGSVIGILRYTKIPVVSQVLGVIVEVIRNLPLLLIIFFT 74 Query: 149 Y 149 Y Sbjct: 75 Y 75 >gi|213966878|ref|ZP_03395028.1| glutamine ABC transporter, permease protein [Pseudomonas syringae pv. tomato T1] gi|301381561|ref|ZP_07229979.1| glutamine ABC transporter, permease protein [Pseudomonas syringae pv. tomato Max13] gi|302061683|ref|ZP_07253224.1| glutamine ABC transporter, permease protein [Pseudomonas syringae pv. tomato K40] gi|302131520|ref|ZP_07257510.1| glutamine ABC transporter, permease protein [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213928200|gb|EEB61745.1| glutamine ABC transporter, permease protein [Pseudomonas syringae pv. tomato T1] Length = 233 Score = 85.9 bits (211), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 56/148 (37%), Positives = 87/148 (58%), Gaps = 4/148 (2%) Query: 232 LPTLVLIALKYQLHFDKP-VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290 +PTLV + L Y F P +L + I S S E++ IAL AA+ +E +RSGL Sbjct: 69 VPTLVQLMLWY---FGIPTLLSESTQIWLSGYSTEYLFSVIALGLCQAAYFSEDIRSGLR 125 Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 A+P GQ+EA+ ALGL + ++ R V+LPQ +R+ +P L + + L KN+SL +A+G +L Sbjct: 126 AIPAGQVEASRALGLGYVRSMRYVILPQGVRNCLPSLINHTVLLFKNTSLVMAIGVVELT 185 Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLS 378 + N T + E L+ +YL++S Sbjct: 186 YATREVENYTFRIFEAYLVATVVYLAIS 213 >gi|126737006|ref|ZP_01752741.1| probable amino acid ABC transporter, permease protein [Roseobacter sp. SK209-2-6] gi|126721591|gb|EBA18294.1| probable amino acid ABC transporter, permease protein [Roseobacter sp. SK209-2-6] Length = 324 Score = 85.9 bits (211), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 51/119 (42%), Positives = 75/119 (63%), Gaps = 2/119 (1%) Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT-RLVLLPQAMRSIIPPLTSQ 330 ALS A++ EI RSG+ ++P GQ EAA ALGL HR T R V+LPQAMR IIPP +Q Sbjct: 198 ALSLVYGAYMTEIFRSGIQSLPAGQWEAADALGL-HRMVTFRKVILPQAMRVIIPPTGNQ 256 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 ++ +LK+SSL VG DL+ + T+ + +E+++ +Y +SI++ L R+ Sbjct: 257 FIAMLKDSSLVSVVGVWDLMFLARTVGRSDFKILEMLITASIVYWLMSIVLELVQKRIE 315 >gi|114566598|ref|YP_753752.1| hypothetical protein Swol_1071 [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|114337533|gb|ABI68381.1| conserved hypothetical protein [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 235 Score = 85.9 bits (211), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 58/168 (34%), Positives = 95/168 (56%), Gaps = 1/168 (0%) Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL-KYQLHFDKPVLGQFN 255 G +L+L T LS F G LL +S + I +P +V I + F + +L F Sbjct: 36 GTLLTLEITALSVAFGMFLGLLAALLKMSPYKILAIPGIVYIDFFRGTPLFVQILLFYFG 95 Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315 + + F + I S + A+IAEIVR+G+ AV RGQ EAA +LG+ +R+A V+ Sbjct: 96 ILPLVFDATSFQAAVIVCSLNSGAYIAEIVRAGIQAVDRGQTEAARSLGMNNRQAMWYVI 155 Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363 LPQA + +IPP+ ++++ +LK++SL +G +L G +++ T +A Sbjct: 156 LPQAYKIVIPPMINEFIAMLKDTSLVAVIGAQELTHQGRILVSVTYEA 203 >gi|239622358|ref|ZP_04665389.1| permease protein of ABC transporter system [Bifidobacterium longum subsp. infantis CCUG 52486] gi|239514355|gb|EEQ54222.1| permease protein of ABC transporter system [Bifidobacterium longum subsp. infantis CCUG 52486] Length = 345 Score = 85.9 bits (211), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 53/139 (38%), Positives = 82/139 (58%), Gaps = 1/139 (0%) Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312 +F I + V F + +I L+ AA+++EIVR+GL AV GQ EAA ALG+ R Sbjct: 162 EFWSIDSNVVVTAFNAAWIGLALNEAAYLSEIVRAGLEAVDPGQTEAAKALGMNRTLIMR 221 Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA-DLVSVGGTIINQTGQAIEIILIWM 371 ++LPQAMR IIPP ++ + +LK +SL AV F +L I N+ + I ++L+ Sbjct: 222 RIVLPQAMRIIIPPTGNETIGMLKTTSLVTAVPFTLELQFATNAIANRIYKPIPLLLVAC 281 Query: 372 FIYLSLSIMIALFMNRLNA 390 F YL ++ ++ + +RL A Sbjct: 282 FWYLLITSILMVVQSRLEA 300 >gi|116873682|ref|YP_850463.1| His/Glu/Gln/Arg/opine ABC transporter permease [Listeria welshimeri serovar 6b str. SLCC5334] gi|116742560|emb|CAK21684.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Listeria welshimeri serovar 6b str. SLCC5334] Length = 486 Score = 85.9 bits (211), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 39/91 (42%), Positives = 68/91 (74%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+S IALS +AA++AEI+R+G+ AV +GQMEAA +LG+T R + R ++LPQA+++I+P Sbjct: 356 FVSGCIALSLNSAAYVAEIIRAGISAVNKGQMEAARSLGMTQRASMRYIILPQAVKNILP 415 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356 L ++++ ++K SS+ +G +L+ + G + Sbjct: 416 ALGNEFVTVIKESSIVSVIGVTELMFMTGVV 446 >gi|50123395|ref|YP_052562.1| amino acid ABC transporter permease [Pectobacterium atrosepticum SCRI1043] gi|49613921|emb|CAG77374.1| probable amino acid ABC transporter, permease protein [Pectobacterium atrosepticum SCRI1043] Length = 256 Score = 85.9 bits (211), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 57/177 (32%), Positives = 94/177 (53%), Gaps = 8/177 (4%) Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280 L + +T ++ L + L+ + + +F P+L N G F ++ L Y +A+ Sbjct: 60 LSWPATCWVYTLRGIPLMMVVFWTYFCVPLLIGHNISG-------FSTMLCTLVIYESAY 112 Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340 IAEIVR G+ A+P GQ EA+ ALG++H KA RLV+LPQA+ + +P L SQ ++++K+S+L Sbjct: 113 IAEIVRGGIQALPSGQYEASRALGMSHLKALRLVILPQALFNSLPSLISQLVSIIKDSTL 172 Query: 341 AVAVGFADLVSVGGTIINQ-TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 + +L + NQ + ++ I Y + NRL + IA K Sbjct: 173 GYVINVPELTYAANQVSNQLLTKPFQVFAIVALSYYIICFSFTFLANRLESWIANKR 229 >gi|241114114|ref|YP_002973589.1| polar amino acid ABC transporter, inner membrane subunit [Ralstonia pickettii 12D] gi|240868687|gb|ACS66345.1| polar amino acid ABC transporter, inner membrane subunit [Ralstonia pickettii 12D] Length = 245 Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 44/127 (34%), Positives = 78/127 (61%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 +F+++ + L+ Y+AA AE +R+G+ ++ GQ A +ALGL+ R V+LPQA R II Sbjct: 109 QFLTVVLCLTLYSAAKCAEQIRAGIESIAAGQRAAGLALGLSTGGIYRHVILPQAFRIII 168 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 PPLTS ++N+ KNS++A+ +G +L + + Q E L IY+ +++++ Sbjct: 169 PPLTSDFMNVFKNSAVALTIGLMELTGQSRQLSEFSAQPFESFLAATVIYMLVTLLVVWL 228 Query: 385 MNRLNAK 391 M+ + A+ Sbjct: 229 MHVIEAR 235 Score = 38.1 bits (87), Expect = 2.5, Method: Compositional matrix adjust. Identities = 19/52 (36%), Positives = 26/52 (50%) Query: 107 ATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPI 158 A +GTL G R + V W YV FRN P LV +F + + +LP+ Sbjct: 43 ALALGTLFGVARTLPQRWVRWPSAAYVHCFRNTPLLVQLFLWFYVLPELLPV 94 >gi|318060995|ref|ZP_07979716.1| glutamate transporter permease [Streptomyces sp. SA3_actG] gi|318077285|ref|ZP_07984617.1| glutamate transporter permease [Streptomyces sp. SA3_actF] Length = 238 Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 58/180 (32%), Positives = 95/180 (52%), Gaps = 15/180 (8%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 + +PL I F GL + IAL + G F I F + L Y Sbjct: 74 RNIPLTVIIVFASLGLFQTLGIALGAE--------GDFKAI-------NFRLAVLGLILY 118 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 T++F+ E VRSG+ VP GQ EAA ALGL+ R+ L++LPQA RS++ PL + + L K Sbjct: 119 TSSFVCEAVRSGINTVPMGQAEAARALGLSFRQVLALIILPQAFRSVVNPLANVLIALTK 178 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 N+++A A+G + + +I + + I L++ F ++ L++ L + ++ K+A+K Sbjct: 179 NTTIAAAIGVGEAAVLMKEMIENEAELVLISLVFAFGFVVLTLPTGLILGWVSKKVAIKR 238 >gi|302522279|ref|ZP_07274621.1| glutamate transporter permease [Streptomyces sp. SPB78] gi|302431174|gb|EFL02990.1| glutamate transporter permease [Streptomyces sp. SPB78] Length = 222 Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 45/126 (35%), Positives = 78/126 (61%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + L YT++F+ E VRSG+ VP GQ EAA ALGL+ R+ L++LPQA RS++ PL + Sbjct: 97 LGLILYTSSFVCEAVRSGINTVPMGQAEAARALGLSFRQVLALIILPQAFRSVVNPLANV 156 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 + L KN+++A A+G + + +I + + I L++ F ++ L++ L + ++ Sbjct: 157 LIALTKNTTIAAAIGVGEAAVLMKEMIENEAELVLISLVFAFGFVVLTLPTGLILGWVSK 216 Query: 391 KIALKE 396 K+A+K Sbjct: 217 KVAIKR 222 >gi|228919496|ref|ZP_04082860.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228840139|gb|EEM85416.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 214 Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 41/89 (46%), Positives = 66/89 (74%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +AL+ + AA I+EIVRSGL+++ +GQ+EAA + GLT+ +A ++LPQA+R ++PPL SQ Sbjct: 93 VALTIFEAAMISEIVRSGLLSIEKGQVEAARSSGLTYVQALWHIILPQALRRMVPPLVSQ 152 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQ 359 +++LLK++SLAV + +L+ I Q Sbjct: 153 FISLLKDTSLAVVISLPELMHNAQIISGQ 181 Score = 38.9 bits (89), Expect = 1.6, Method: Compositional matrix adjust. Identities = 21/61 (34%), Positives = 38/61 (62%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G + T +A ++ + IIG+++G R + +V+ + V VE+ RN+P L++IFF Sbjct: 15 LLKGLLITLEVALIAIVLSFIIGSVIGILRYTKIPVVSQVLGVIVELIRNLPLLLIIFFT 74 Query: 149 Y 149 Y Sbjct: 75 Y 75 >gi|269139978|ref|YP_003296679.1| glutamate/aspartate transport system permease protein [Edwardsiella tarda EIB202] gi|267985639|gb|ACY85468.1| glutamate/aspartate transport system permease protein [Edwardsiella tarda EIB202] gi|304559811|gb|ADM42475.1| Glutamate Aspartate transport system permease protein GltJ [Edwardsiella tarda FL6-60] Length = 246 Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 45/129 (34%), Positives = 78/129 (60%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+S + L +TAA + E VR+ + ++P GQ A +A+G T + R VLLP A R I+P Sbjct: 111 FVSSLLCLGLFTAARVCEQVRAAIQSLPAGQKSAGLAMGFTLPQTYRYVLLPNAYRVIVP 170 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PLTS+ LNL+KNS++A +G ++ + G +++ + A E Y++++ ++ L M Sbjct: 171 PLTSEMLNLVKNSAIASTIGLMEMAAQAGKLLDYSAHAYESFTAITLAYIAINGLLMLAM 230 Query: 386 NRLNAKIAL 394 + L ++ L Sbjct: 231 HLLERRLQL 239 Score = 37.7 bits (86), Expect = 2.8, Method: Compositional matrix adjust. Identities = 25/75 (33%), Positives = 42/75 (56%) Query: 83 SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142 ++Y I G T L+ + + A ++G+L+G R ++ +A I +YVE+FRN+P + Sbjct: 19 TTYLGWIWSGMQVTVALSLAAWVIAFLLGSLLGILRTLPSRPLAMIGALYVELFRNVPLI 78 Query: 143 VVIFFLYKSVLSVLP 157 V F Y V +LP Sbjct: 79 VQFFTWYLVVPELLP 93 >gi|42782597|ref|NP_979844.1| amino acid ABC transproter permease protein [Bacillus cereus ATCC 10987] gi|206975541|ref|ZP_03236454.1| amino acid ABC transproter permease protein [Bacillus cereus H3081.97] gi|217960925|ref|YP_002339493.1| amino acid ABC transproter permease protein [Bacillus cereus AH187] gi|222096983|ref|YP_002531040.1| amino acid abc transproter, permease protein [Bacillus cereus Q1] gi|229140135|ref|ZP_04268694.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus BDRD-ST26] gi|42738523|gb|AAS42452.1| amino acid ABC transproter, permease protein VC0009 [Bacillus cereus ATCC 10987] gi|206746443|gb|EDZ57837.1| amino acid ABC transproter permease protein [Bacillus cereus H3081.97] gi|217064180|gb|ACJ78430.1| amino acid ABC transproter permease protein [Bacillus cereus AH187] gi|221241041|gb|ACM13751.1| amino acid ABC transproter, permease protein [Bacillus cereus Q1] gi|228643347|gb|EEK99619.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus BDRD-ST26] Length = 222 Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 66/222 (29%), Positives = 115/222 (51%), Gaps = 21/222 (9%) Query: 177 SFPTL------TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230 SFP L T+ + SFV+GI L++ ++ + ++ +YIS F Sbjct: 11 SFPQLFKYVYITLGITVVSMIISFVIGIGLAIITKNKTKFLY-----SIARVYISFFR-- 63 Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290 G P LV + + L+F P TV + I LS AA+++EI+R L Sbjct: 64 GTPLLVQL---FVLYFGLP-----QIFPTFTVLTAMQATLIGLSLNNAAYLSEIIRGSLN 115 Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 AV GQM+A +++G+T +A R ++ PQA+R +P L + ++ LLK SSL+ A+G A+++ Sbjct: 116 AVESGQMDACLSVGMTKAQAMRQIIFPQAIRVAVPSLGNNFVGLLKESSLSFALGVAEIL 175 Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 + + Q+ + +E L +Y ++I+I+ +L K+ Sbjct: 176 AQAKMLAAQSYRYMESYLAVAIVYWIITIVISWGQKKLEKKL 217 >gi|23335783|ref|ZP_00121016.1| COG0765: ABC-type amino acid transport system, permease component [Bifidobacterium longum DJO10A] gi|189439798|ref|YP_001954879.1| amino acid ABC transporter permease [Bifidobacterium longum DJO10A] gi|312133204|ref|YP_004000543.1| hism6 [Bifidobacterium longum subsp. longum BBMN68] gi|317482550|ref|ZP_07941565.1| binding-protein-dependent transport system inner membrane component [Bifidobacterium sp. 12_1_47BFAA] gi|189428233|gb|ACD98381.1| ABC-type amino acid transport system permease component [Bifidobacterium longum DJO10A] gi|291517267|emb|CBK70883.1| amino acid ABC transporter membrane protein, PAAT family (TC 3.A.1.3.-) [Bifidobacterium longum subsp. longum F8] gi|311772405|gb|ADQ01893.1| HisM6 [Bifidobacterium longum subsp. longum BBMN68] gi|316915972|gb|EFV37379.1| binding-protein-dependent transport system inner membrane component [Bifidobacterium sp. 12_1_47BFAA] Length = 331 Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 53/139 (38%), Positives = 82/139 (58%), Gaps = 1/139 (0%) Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312 +F I + V F + +I L+ AA+++EIVR+GL AV GQ EAA ALG+ R Sbjct: 144 EFWSIDSNVVVTAFNAAWIGLALNEAAYLSEIVRAGLEAVDPGQTEAAKALGMNRTLIMR 203 Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA-DLVSVGGTIINQTGQAIEIILIWM 371 ++LPQAMR IIPP ++ + +LK +SL AV F +L I N+ + I ++L+ Sbjct: 204 RIVLPQAMRIIIPPTGNETIGMLKTTSLVTAVPFTLELQFATNAIANRIYKPIPLLLVAC 263 Query: 372 FIYLSLSIMIALFMNRLNA 390 F YL ++ ++ + +RL A Sbjct: 264 FWYLLITSILMVVQSRLEA 282 >gi|19746459|ref|NP_607595.1| putative amino acid ABC transporter (permease protein) [Streptococcus pyogenes MGAS8232] gi|19748662|gb|AAL98094.1| putative amino acid ABC transporter (permease protein) [Streptococcus pyogenes MGAS8232] Length = 228 Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 56/187 (29%), Positives = 104/187 (55%), Gaps = 12/187 (6%) Query: 214 KTGKALPLLYISTFLIF---GLPTLVLIALKYQ-LHFDKPVLGQFNFIGGSTVSPEFMSL 269 K PL ++ ++ G P +V I + + +HF+ IG + +F L Sbjct: 42 KRSHVKPLTWVVNLYVWIFRGTPMVVQIMIAFAWMHFNN-----MPTIGFGVLDLDFSRL 96 Query: 270 Y---IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326 I +S + A+I+EIVR+G+ AVP+GQ+EAA +LG+ + A R V+LPQA ++I+P Sbjct: 97 LPGIIIISLNSGAYISEIVRAGIEAVPKGQLEAAYSLGIRPQNAMRYVILPQAFKNILPA 156 Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386 L ++++ ++K+S+L +G +L + +++ T I +L+ F YL ++ ++A + Sbjct: 157 LGNEFITIIKDSALLQTIGVMELWNGAQSVVTATYSPISPLLVAAFYYLMITTVMAQLLA 216 Query: 387 RLNAKIA 393 L +A Sbjct: 217 VLERHMA 223 >gi|206978167|ref|ZP_03239049.1| amino acid ABC transporter, permease protein [Bacillus cereus H3081.97] gi|206743639|gb|EDZ55064.1| amino acid ABC transporter, permease protein [Bacillus cereus H3081.97] Length = 214 Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 40/89 (44%), Positives = 66/89 (74%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +AL+ + AA I+EIVRSGL+++ +GQ+EAA + GLT+ +A ++LPQA+R ++PPL SQ Sbjct: 93 VALTIFEAAMISEIVRSGLLSIEKGQIEAARSSGLTYVQALWHIILPQALRRMVPPLVSQ 152 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQ 359 +++LLK+++LAV + +L+ I Q Sbjct: 153 FISLLKDTALAVVISLPELIHNAQIISGQ 181 Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust. Identities = 22/61 (36%), Positives = 37/61 (60%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G + T +A ++ + IIG+++G R +V+ I + VEV RN+P L++IFF Sbjct: 15 LLKGLLITLEVALVAIVLSFIIGSVIGILRYMKIPVVSQILGIIVEVIRNLPLLLIIFFT 74 Query: 149 Y 149 Y Sbjct: 75 Y 75 >gi|325125285|gb|ADY84615.1| Glutamine ABC transporter permease component [Lactobacillus delbrueckii subsp. bulgaricus 2038] Length = 222 Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 67/213 (31%), Positives = 114/213 (53%), Gaps = 15/213 (7%) Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240 +T++ + + SFV+G+ L L R +R KT + ++ + +I LP L++I Sbjct: 22 VTIEVSVISIILSFVIGLALGLI--RFTR-IDAKTTRISKVVGVIIDIIRNLPLLLIIFF 78 Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300 Y F PV+G F + IA+ + +A IAE+VR+G++AV GQME A Sbjct: 79 SY---FGLPVMG--------IRVDAFQASVIAMVVFESAMIAEVVRTGIMAVDPGQMEGA 127 Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ- 359 + G+T+ +A V+ PQA+ +IP L SQ+++L+K++SLA + +L+ I NQ Sbjct: 128 RSNGMTYMQAMTHVVFPQALSKMIPALLSQFVSLIKDTSLATIIVLPELLYHAEIIYNQN 187 Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 T I + L +Y + ++ F N L+ +I Sbjct: 188 TKYMIPMYLAVAVMYFIICFALSSFANYLSKRI 220 >gi|322688640|ref|YP_004208374.1| ABC transporter permease [Bifidobacterium longum subsp. infantis 157F] gi|320459976|dbj|BAJ70596.1| putative ABC transporter permease component [Bifidobacterium longum subsp. infantis 157F] Length = 331 Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 53/139 (38%), Positives = 82/139 (58%), Gaps = 1/139 (0%) Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312 +F I + V F + +I L+ AA+++EIVR+GL AV GQ EAA ALG+ R Sbjct: 144 EFWSIDSNVVVTAFNAAWIGLALNEAAYLSEIVRAGLEAVDPGQTEAAKALGMNRTLIMR 203 Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA-DLVSVGGTIINQTGQAIEIILIWM 371 ++LPQAMR IIPP ++ + +LK +SL AV F +L I N+ + I ++L+ Sbjct: 204 RIVLPQAMRIIIPPTGNETIGMLKTTSLVTAVPFTLELQFATNAIANRIYKPIPLLLVAC 263 Query: 372 FIYLSLSIMIALFMNRLNA 390 F YL ++ ++ + +RL A Sbjct: 264 FWYLLITSILMVVQSRLEA 282 >gi|320334506|ref|YP_004171217.1| polar amino acid ABC transporter inner membrane subunit [Deinococcus maricopensis DSM 21211] gi|319755795|gb|ADV67552.1| polar amino acid ABC transporter, inner membrane subunit [Deinococcus maricopensis DSM 21211] Length = 404 Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 49/135 (36%), Positives = 79/135 (58%), Gaps = 1/135 (0%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 +F ++ +AL+ +T A++AEIVR+G+ A+PRGQ EAA ALGL+ V+LPQA+R++I Sbjct: 262 QFWAVILALALFTGAYVAEIVRAGIRALPRGQDEAARALGLSGTHTMLSVILPQALRNMI 321 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA-IEIILIWMFIYLSLSIMIAL 383 PPL Q+++L K++SL +G +L N+ A EI L +Y + ++ Sbjct: 322 PPLVGQFISLFKDTSLVSIIGLIELAGAARITGNRVVTATFEIYLTVAVLYFIFAYALSS 381 Query: 384 FMNRLNAKIALKEKK 398 RL A + + Sbjct: 382 AARRLEAPTGRRVAR 396 >gi|144899136|emb|CAM76000.1| binding-protein-dependent transport system inner membrane component [Magnetospirillum gryphiswaldense MSR-1] Length = 380 Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 38/76 (50%), Positives = 58/76 (76%) Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 ++ +TAA++AE VR GL A+PRGQ EAA ALGL++ + RL++LPQA+R +IPP+ +Q++ Sbjct: 252 MTLFTAAYLAEAVRGGLQAIPRGQEEAADALGLSYWRKMRLIVLPQALRLVIPPIVNQFI 311 Query: 333 NLLKNSSLAVAVGFAD 348 + K++SL VG D Sbjct: 312 SCFKDTSLVTIVGLYD 327 >gi|308067188|ref|YP_003868793.1| ABC-type amino acid transport system, permease component [Paenibacillus polymyxa E681] gi|305856467|gb|ADM68255.1| ABC-type amino acid transport system, permease component [Paenibacillus polymyxa E681] Length = 219 Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 59/178 (33%), Positives = 98/178 (55%), Gaps = 27/178 (15%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 + +PLL + F GLPTL + P+ G F+ G+ + L+ Y Sbjct: 64 RNIPLLIVVLFFYLGLPTLGI-----------PLDG---FVSGT----------LGLTVY 99 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 TA+FIAE +R+G+ AVP+GQ EAA + GL++ + ++LPQA++ ++P + +Q++NL+K Sbjct: 100 TASFIAEAIRAGIQAVPKGQFEAARSSGLSYNQTMINIILPQAIKVVLPAIGNQFINLVK 159 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI---MIALFMNRLNAK 391 NSS+ V DL+ I + T I + I +YL L++ + L+M R +K Sbjct: 160 NSSVLAIVAGLDLMYYSDLINSDTFLPITVYAITALLYLILTVPLSFLVLYMERRLSK 217 Score = 44.3 bits (103), Expect = 0.036, Method: Compositional matrix adjust. Identities = 26/68 (38%), Positives = 39/68 (57%), Gaps = 1/68 (1%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151 G ++T + +I + I+G ++ R++ K + WI VYVEV RNIP L+V+ F Y Sbjct: 19 GLLHTVQASVIALIGSFILGAIIAILRIAPFKWLNWIGTVYVEVIRNIPLLIVVLFFYLG 78 Query: 152 VLSVLPIP 159 L L IP Sbjct: 79 -LPTLGIP 85 >gi|320007607|gb|ADW02457.1| polar amino acid ABC transporter, inner membrane subunit [Streptomyces flavogriseus ATCC 33331] Length = 214 Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 49/122 (40%), Positives = 76/122 (62%), Gaps = 2/122 (1%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +AL CYT+AFI E +RSG+ VP GQ EAA +LG++ + V+LPQA RS+IPP+ S Sbjct: 89 LALGCYTSAFICEALRSGINTVPTGQGEAARSLGMSFGQTLGNVVLPQAFRSVIPPVGST 148 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI-YLSLSIMIALFMNRLN 389 + L KNS++A A +L+ T +N+ G +I +W+ + YL +++ I+ N L Sbjct: 149 LIALAKNSAIAGAFSVTELLGTYKT-LNELGYSIIWTFVWIAVGYLIITLAISALFNVLE 207 Query: 390 AK 391 + Sbjct: 208 KR 209 >gi|21910697|ref|NP_664965.1| putative amino acid ABC transporter (permease protein) [Streptococcus pyogenes MGAS315] gi|28895613|ref|NP_801963.1| amino acid ABC transporter (permease protein) [Streptococcus pyogenes SSI-1] gi|21904900|gb|AAM79768.1| putative amino acid ABC transporter (permease protein) [Streptococcus pyogenes MGAS315] gi|28810862|dbj|BAC63796.1| putative amino acid ABC transporter (permease protein) [Streptococcus pyogenes SSI-1] Length = 228 Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 56/187 (29%), Positives = 104/187 (55%), Gaps = 12/187 (6%) Query: 214 KTGKALPLLYISTFLIF---GLPTLVLIALKYQ-LHFDKPVLGQFNFIGGSTVSPEFMSL 269 K PL ++ ++ G P +V I + + +HF+ IG + +F L Sbjct: 42 KRSHVKPLTWVVNLYVWIFRGTPMVVQIMIAFAWMHFNN-----MPTIGFGVLDLDFSRL 96 Query: 270 Y---IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326 I +S + A+I+EIVR+G+ AVP+GQ+EAA +LG+ + A R V+LPQA ++I+P Sbjct: 97 LPGIIIISLNSGAYISEIVRAGIEAVPKGQLEAAYSLGIRPQNAMRYVILPQAFKNILPA 156 Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386 L ++++ ++K+S+L +G +L + +++ T I +L+ F YL ++ ++A + Sbjct: 157 LGNEFITIIKDSALLQTIGVMELWNGAQSVVTATYSPISPLLVAAFYYLMVTTVMAQLLA 216 Query: 387 RLNAKIA 393 L +A Sbjct: 217 VLERHMA 223 >gi|330970134|gb|EGH70200.1| glutamine ABC transporter permease [Pseudomonas syringae pv. aceris str. M302273PT] Length = 233 Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 55/148 (37%), Positives = 87/148 (58%), Gaps = 4/148 (2%) Query: 232 LPTLVLIALKYQLHFDKP-VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290 +PTLV + L Y F P +L + I + S E++ IAL AA+ +E +RSGL Sbjct: 69 VPTLVQLMLWY---FGIPTLLSESTQIWLANYSTEYLFSVIALGLCQAAYFSEDIRSGLR 125 Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 A+P GQ+EA+ ALGL + ++ R V+LPQ +R+ +P L + + L KN+SL +A+G +L Sbjct: 126 AIPAGQVEASRALGLGYVRSMRYVILPQGVRNCLPSLINHTVLLFKNTSLVMAIGVVELT 185 Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLS 378 + N T + E L+ +YL++S Sbjct: 186 YATREVENYTFRTFEAYLVATVVYLAIS 213 >gi|163789714|ref|ZP_02184151.1| predicted transporter subunit: membrane component of ABC superfamily [Carnobacterium sp. AT7] gi|328956822|ref|YP_004374208.1| cystine ABC transporter [Carnobacterium sp. 17-4] gi|159874936|gb|EDP69003.1| predicted transporter subunit: membrane component of ABC superfamily [Carnobacterium sp. AT7] gi|328673146|gb|AEB29192.1| cystine ABC transporter [Carnobacterium sp. 17-4] Length = 214 Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 63/205 (30%), Positives = 112/205 (54%), Gaps = 18/205 (8%) Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251 F ++GI++++ +R K +A+ Y+S +I G PTLV I + Y Sbjct: 28 FGSLIGIIVAI-----ARLKGNKAIQAVARGYVS--IIRGTPTLVQIIIIY--------Y 72 Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311 G +F G ++ P + +IALS A+++E +R L ++P+GQMEAA A G+T +A Sbjct: 73 GLVDF--GISLDP-LPAAFIALSVNNGAYLSESIRGALQSIPKGQMEAAYATGMTPWQAM 129 Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371 R ++LPQA+R IPP+ + ++ +LK +SL + +L+ +I Q + L Sbjct: 130 RRIILPQAIRIAIPPVGNTFIGMLKETSLVSVISVTELLRSAQLLIAQYYSYMPFYLGIA 189 Query: 372 FIYLSLSIMIALFMNRLNAKIALKE 396 IY +S + + +N+L A++++ E Sbjct: 190 VIYWIMSTVFSFLLNKLEARMSIYE 214 Score = 38.1 bits (87), Expect = 2.7, Method: Compositional matrix adjust. Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 13/93 (13%) Query: 77 VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136 +P+ +Y T +L+ V+ F+ ++IG +V RL NK + + R YV + Sbjct: 8 IPFLLQGAYYT-LLITLVSMFF--------GSLIGIIVAIARLKGNKAIQAVARGYVSII 58 Query: 137 RNIPPLVVIFFLYKSV----LSVLPIPDHSIVL 165 R P LV I +Y + +S+ P+P I L Sbjct: 59 RGTPTLVQIIIIYYGLVDFGISLDPLPAAFIAL 91 >gi|299067958|emb|CBJ39172.1| glutamate/aspartate transport protein; ABC superfamily, membrane component [Ralstonia solanacearum CMR15] Length = 227 Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 44/125 (35%), Positives = 77/125 (61%) Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327 S +A + + AA+ +EI+R+G+ +V RGQM AA A+G+T+ +A RLV+LPQA R++IP L Sbjct: 101 SALVAFALFEAAYYSEIIRAGIQSVSRGQMFAAYAMGMTYGQAMRLVILPQAFRNMIPLL 160 Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387 +Q + L +++SL +D + I + G+ +E++L F Y + ++ + R Sbjct: 161 LTQAIILFQDTSLVYVSALSDFFTQAYNIGERDGRIVELLLFAGFCYFVICFGASVLVKR 220 Query: 388 LNAKI 392 L K+ Sbjct: 221 LQKKV 225 >gi|187921592|ref|YP_001890624.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia phytofirmans PsJN] gi|187720030|gb|ACD21253.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia phytofirmans PsJN] Length = 245 Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 49/131 (37%), Positives = 77/131 (58%), Gaps = 1/131 (0%) Query: 265 EFMSLYI-ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 +F+S+ I +L YT + I E VR+G+ A+PRGQ +A ALGLT + R VLLP R+I Sbjct: 109 QFLSVSIFSLGIYTGSRICEQVRAGIQALPRGQFDAGFALGLTRAQTYRYVLLPVTFRTI 168 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 + PLTS++L + KNS++A +G +L +++ T Q E + Y++L+ I Sbjct: 169 LGPLTSEFLIISKNSAVASTIGLLELSGQARQLVDYTAQPYESFICVTLAYMALNFAILH 228 Query: 384 FMNRLNAKIAL 394 MN + + L Sbjct: 229 GMNWIRRQTRL 239 >gi|331015650|gb|EGH95706.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 185 Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 52/178 (29%), Positives = 93/178 (52%), Gaps = 17/178 (9%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 +++PLL + T+ +P L++ D P+ F S +A + Sbjct: 25 RSIPLLLVITWFYLAVP----FVLRWITGEDTPI-------------GAFASCVVAFMMF 67 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 AA+ EIVR+G+ ++ +GQM AA ALG+ + + RL++LPQA R + P L Q + L + Sbjct: 68 EAAYFCEIVRAGVQSISKGQMGAAQALGMNYSQMMRLIILPQAFRKMTPLLLQQSIILFQ 127 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394 ++SL VG D ++ + + G+A E ++I +Y ++S +L + RL + A+ Sbjct: 128 DTSLVYTVGLVDFLNASRSSGDIIGRANEFLIIAGLVYFTISFAASLLVKRLQKRFAV 185 >gi|29828503|ref|NP_823137.1| glutamate transporter permease [Streptomyces avermitilis MA-4680] gi|29605606|dbj|BAC69672.1| putative glutamate ABC transporter permease [Streptomyces avermitilis MA-4680] Length = 214 Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 49/122 (40%), Positives = 76/122 (62%), Gaps = 2/122 (1%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +AL CYT+AFI E +RSG+ VPRGQ EAA +LG+T + +V+LPQA RS+I P+ S Sbjct: 89 LALGCYTSAFICEALRSGINTVPRGQGEAARSLGMTFEQTLSVVVLPQAFRSVISPVGST 148 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI-YLSLSIMIALFMNRLN 389 + L KNS++A A +L+ T +++ G I +W+ + YL +++ I+ N L Sbjct: 149 LIALAKNSAIAGAFSVNELLGTYKT-LSELGYNIVWTFVWIAVGYLIITLTISAIFNFLE 207 Query: 390 AK 391 + Sbjct: 208 RR 209 >gi|326938358|gb|AEA14254.1| glutamine transport system permease protein glnP [Bacillus thuringiensis serovar chinensis CT-43] Length = 221 Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 41/89 (46%), Positives = 66/89 (74%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +AL+ + AA I+EIVRSGL+++ +GQ+EAA + GLT+ +A ++LPQA+R ++PPL SQ Sbjct: 93 VALTIFEAAMISEIVRSGLLSIEKGQIEAARSSGLTYVQALWHIILPQALRRMVPPLVSQ 152 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQ 359 +++LLK++SLAV + +L+ I Q Sbjct: 153 FISLLKDTSLAVVISLPELMHNAQIISGQ 181 >gi|15675409|ref|NP_269583.1| putative amino acid ABC transporter permease [Streptococcus pyogenes M1 GAS] gi|71911051|ref|YP_282601.1| arginine transporter permease [Streptococcus pyogenes MGAS5005] gi|94988863|ref|YP_596964.1| arginine transport system permease protein [Streptococcus pyogenes MGAS9429] gi|94990763|ref|YP_598863.1| arginine ABC transporter permease [Streptococcus pyogenes MGAS10270] gi|94992753|ref|YP_600852.1| arginine ABC transporter permease [Streptococcus pyogenes MGAS2096] gi|94994741|ref|YP_602839.1| Arginine transport system permease protein artQ [Streptococcus pyogenes MGAS10750] gi|139473469|ref|YP_001128185.1| putative amino acid ABC transporter permease protein [Streptococcus pyogenes str. Manfredo] gi|209559673|ref|YP_002286145.1| Putative amino acid ABC transporter [Streptococcus pyogenes NZ131] gi|306827045|ref|ZP_07460343.1| amino acid ABC superfamily ATP binding cassette transporter, permease protein [Streptococcus pyogenes ATCC 10782] gi|13622596|gb|AAK34304.1| putative amino acid ABC transporter (permease protein) [Streptococcus pyogenes M1 GAS] gi|71853833|gb|AAZ51856.1| arginine transport system permease protein [Streptococcus pyogenes MGAS5005] gi|94542371|gb|ABF32420.1| arginine transport system permease protein [Streptococcus pyogenes MGAS9429] gi|94544271|gb|ABF34319.1| Arginine transport system permease protein artQ [Streptococcus pyogenes MGAS10270] gi|94546261|gb|ABF36308.1| Arginine transport system permease protein artQ [Streptococcus pyogenes MGAS2096] gi|94548249|gb|ABF38295.1| Arginine transport system permease protein artQ [Streptococcus pyogenes MGAS10750] gi|134271716|emb|CAM29949.1| putative amino acid ABC transporter permease protein [Streptococcus pyogenes str. Manfredo] gi|209540874|gb|ACI61450.1| Putative amino acid ABC transporter [Streptococcus pyogenes NZ131] gi|304430791|gb|EFM33802.1| amino acid ABC superfamily ATP binding cassette transporter, permease protein [Streptococcus pyogenes ATCC 10782] Length = 228 Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 56/187 (29%), Positives = 104/187 (55%), Gaps = 12/187 (6%) Query: 214 KTGKALPLLYISTFLIF---GLPTLVLIALKYQ-LHFDKPVLGQFNFIGGSTVSPEFMSL 269 K PL ++ ++ G P +V I + + +HF+ IG + +F L Sbjct: 42 KRSHVKPLTWVVNLYVWIFRGTPMVVQIMIAFAWMHFNN-----MPTIGFGVLDLDFSRL 96 Query: 270 Y---IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326 I +S + A+I+EIVR+G+ AVP+GQ+EAA +LG+ + A R V+LPQA ++I+P Sbjct: 97 LPGIIIISLNSGAYISEIVRAGIEAVPKGQLEAAYSLGIRPQNAMRYVILPQAFKNILPA 156 Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386 L ++++ ++K+S+L +G +L + +++ T I +L+ F YL ++ ++A + Sbjct: 157 LGNEFITIIKDSALLQTIGVMELWNGAQSVVTATYSPISPLLVAAFYYLMVTTVMAQLLA 216 Query: 387 RLNAKIA 393 L +A Sbjct: 217 VLERHMA 223 >gi|145224552|ref|YP_001135230.1| polar amino acid ABC transporter, inner membrane subunit [Mycobacterium gilvum PYR-GCK] gi|145217038|gb|ABP46442.1| amino acid ABC transporter membrane protein 2, PAAT family [Mycobacterium gilvum PYR-GCK] Length = 291 Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 68/224 (30%), Positives = 112/224 (50%), Gaps = 31/224 (13%) Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI---FGLPTLVLI 238 T+ A V + +LG VL + RLS H P+ ++S+ L+ +P L+++ Sbjct: 71 TLTAAAVSIVLALILGFVLGV--GRLSTH--------TPIRWVSSVLVEFFRAVPVLIMM 120 Query: 239 ALKYQLH-----FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293 Y L+ F L I G L+ Y A IAEIVR+G+ A+P Sbjct: 121 IFAYFLYAFYDVFPSKYLALAGVITG-------------LTLYNGAVIAEIVRAGVHALP 167 Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353 RGQ EA+ ALGLT + R +LLPQA+ S++P L SQ + +LK+++L + F ++V G Sbjct: 168 RGQAEASSALGLTWGQTMRSILLPQAVTSMLPVLISQLVVVLKDTALGYQITFVEMVRQG 227 Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 I + G I +++ + ++L+ ++ F L ++ K Sbjct: 228 TVIGSAYGNYIPALIVIAVLMIALNFSLSWFATWLEKRMRRSRK 271 Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust. Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 1/86 (1%) Query: 64 LSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK 123 L ER ++ P+ + + T +L G T A ++ A I+G ++G GRLS + Sbjct: 40 LDERGQLTAEK-WEPFLTGDLWRTYVLPGIEGTLTAAAVSIVLALILGFVLGVGRLSTHT 98 Query: 124 LVAWICRVYVEVFRNIPPLVVIFFLY 149 + W+ V VE FR +P L+++ F Y Sbjct: 99 PIRWVSSVLVEFFRAVPVLIMMIFAY 124 >gi|242279754|ref|YP_002991883.1| polar amino acid ABC transporter inner membrane subunit [Desulfovibrio salexigens DSM 2638] gi|242122648|gb|ACS80344.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio salexigens DSM 2638] Length = 222 Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 53/195 (27%), Positives = 101/195 (51%), Gaps = 31/195 (15%) Query: 206 RLSRHF--------HEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFI 257 +LSR+F + + + P+L + FL +G+P + + + Sbjct: 46 KLSRNFFTRKIAGVYVEAIRGTPMLVQAMFLYYGVPMAIGMRI----------------- 88 Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317 P + I ++ + A+IAEIVR + ++ +GQ EA ++GLT+ + R ++ P Sbjct: 89 ------PPMTAGIIIIAVNSGAYIAEIVRGAVQSINKGQFEAGRSIGLTNTQTMRFIIWP 142 Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377 QA++ +IPPL +Q++ LK++SL + +G +L+ G I + +A E+ L +YL + Sbjct: 143 QALKRMIPPLGNQFIISLKDTSLLMVIGVGELMRTGQEITSVNFRAFEVYLAVACVYLVM 202 Query: 378 SIMIALFMNRLNAKI 392 ++ IA M R+ K+ Sbjct: 203 TLSIAFAMRRIEKKL 217 >gi|331015347|gb|EGH95403.1| glutamine ABC transporter, permease protein [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 277 Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 56/148 (37%), Positives = 87/148 (58%), Gaps = 4/148 (2%) Query: 232 LPTLVLIALKYQLHFDKP-VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290 +PTLV + L Y F P +L + I S S E++ IAL AA+ +E +RSGL Sbjct: 113 VPTLVQLMLWY---FGIPTLLSESTQIWLSGYSTEYLFSVIALGLCQAAYFSEDIRSGLR 169 Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 A+P GQ+EA+ ALGL + ++ R V+LPQ +R+ +P L + + L KN+SL +A+G +L Sbjct: 170 AIPAGQVEASRALGLGYVRSMRYVILPQGVRNCLPSLINHTVLLFKNTSLVMAIGVVELT 229 Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLS 378 + N T + E L+ +YL++S Sbjct: 230 YATREVENYTFRTFEAYLVATVVYLAIS 257 >gi|170742665|ref|YP_001771320.1| polar amino acid ABC transporter inner membrane subunit [Methylobacterium sp. 4-46] gi|168196939|gb|ACA18886.1| polar amino acid ABC transporter, inner membrane subunit [Methylobacterium sp. 4-46] Length = 230 Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 54/182 (29%), Positives = 96/182 (52%), Gaps = 21/182 (11%) Query: 231 GLPTLVLIALKY--------------QLHFDKPVLGQFNFIGGSTVSP----EFMSLYIA 272 GLP L L+A Y +F P LGQ+ IG P F S + Sbjct: 50 GLPVLPLVAKGYVNFMRSLPLVLVIFWFYFLVPYLGQW-LIGAE--RPIQVGAFTSSLVT 106 Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 + + AA+ +EI+R+G+ ++P+GQ AA ALGLT+ ++ V+LPQA R+++P L +Q + Sbjct: 107 FTLFEAAYFSEIMRAGIQSIPKGQAAAASALGLTYWQSMGSVILPQAFRNMLPVLLTQTI 166 Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 L +++SL + D + + + G+ +E+ L +Y ++ + ++ + RL +I Sbjct: 167 VLFQDTSLVYVLSITDFLGAASKVAQRDGRLVEMYLFAALVYFAICFLASILVRRLQRRI 226 Query: 393 AL 394 A+ Sbjct: 227 AI 228 >gi|322833173|ref|YP_004213200.1| polar amino acid ABC transporter inner membrane subunit [Rahnella sp. Y9602] gi|321168374|gb|ADW74073.1| polar amino acid ABC transporter, inner membrane subunit [Rahnella sp. Y9602] Length = 222 Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 62/208 (29%), Positives = 111/208 (53%), Gaps = 18/208 (8%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 VF +LG VL+L RLS HF PL ++S F + LIA + +++ P Sbjct: 31 VFGLILGFVLALM--RLS-HFW-------PLSWLSRFYVSVFRGTPLIAQLFMIYYGLP- 79 Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 QF G + P + I LS TAA+ +E +R+ + ++ +GQ EAA ++G+ + Sbjct: 80 --QF----GIELDP-IPAAMIGLSLNTAAYTSETLRAAISSIEKGQWEAAASIGMNPWQT 132 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370 R V+LPQA R+ +PPL + ++ L+K++SLA + +L + ++T + + L Sbjct: 133 MRRVILPQAARTALPPLGNSFIGLVKDTSLAATIQVPELFRQAQLVTSRTLEVFTMYLAA 192 Query: 371 MFIYLSLSIMIALFMNRLNAKIALKEKK 398 IY L+ +++ NRL ++ ++++ Sbjct: 193 SVIYWVLATVLSFLQNRLEDRVNRQDQE 220 Score = 39.7 bits (91), Expect = 0.91, Method: Compositional matrix adjust. Identities = 30/97 (30%), Positives = 48/97 (49%), Gaps = 8/97 (8%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G + T L+ GM+ I+G ++ RLS ++W+ R YV VFR P + +F + Sbjct: 15 LLKGTLFTLQLSLGGMVFGLILGFVLALMRLSHFWPLSWLSRFYVSVFRGTPLIAQLFMI 74 Query: 149 YKSV----LSVLPIPDHSIVLPFGMFLNNRGLSFPTL 181 Y + + + PIP I G+ LN + TL Sbjct: 75 YYGLPQFGIELDPIPAAMI----GLSLNTAAYTSETL 107 >gi|319782257|ref|YP_004141733.1| polar amino acid ABC transporter inner membrane subunit [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317168145|gb|ADV11683.1| polar amino acid ABC transporter, inner membrane subunit [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 313 Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 65/207 (31%), Positives = 107/207 (51%), Gaps = 15/207 (7%) Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV----- 236 T+ A I + + V+G V+++ S G LY+ F G+P L+ Sbjct: 77 TLMLTAVIMILAIVVGTVIAIMRVSPSPVLRAFAG-----LYVWFFR--GVPALIQLIFW 129 Query: 237 --LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294 L L ++ P +G + + F S +ALS A ++AEI+R+G+ +VP Sbjct: 130 FNLSLLVREVSLTIPFVGTLFSVRTNDFMTPFFSAVVALSLCEAGYMAEIIRAGIKSVPS 189 Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354 GQ EAA ALG+ +R + + LPQAMR ++PP ++ +NLLK +SL + DL Sbjct: 190 GQAEAASALGMPYRMILKRITLPQAMRFVLPPTGNEAINLLKMTSLVTFIAVDDLFYSAQ 249 Query: 355 TIINQTGQAIEIILIWMFIYLS-LSIM 380 +I +T + I ++++ F YL+ +SIM Sbjct: 250 SIYARTFETIPLLIVVAFWYLAVVSIM 276 >gi|206967600|ref|ZP_03228556.1| putative amino acid ABC transporter, permease protein [Bacillus cereus AH1134] gi|229188623|ref|ZP_04315662.1| Amino acid ABC transproter, permease [Bacillus cereus ATCC 10876] gi|206736520|gb|EDZ53667.1| putative amino acid ABC transporter, permease protein [Bacillus cereus AH1134] gi|228594812|gb|EEK52592.1| Amino acid ABC transproter, permease [Bacillus cereus ATCC 10876] Length = 230 Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 74/223 (33%), Positives = 117/223 (52%), Gaps = 19/223 (8%) Query: 177 SFPTLTMDT--NAKIFVFSFVLGIVLSL-FATRLSRHFHEKTGKALPLLYISTFLIFGLP 233 ++PTL T ++ + S VLG ++ L FA R + K ++ +YI+ +I G P Sbjct: 8 TYPTLLKATIVTLQLTLTSLVLGSLIGLLFA--FFRISNNKVLNSIAHIYIA--IIRGTP 63 Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293 +V IA+ Y F SP F + IAL+ + A+I EI R + +V Sbjct: 64 LIVQIAILY-----------FGITSVIVFSP-FWAGAIALAIHNGAYITEIFRGSIQSVD 111 Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353 RGQ+EAA +LG+ + A R ++LPQA R +PPL +Q++ LK+SSL VG ++L G Sbjct: 112 RGQLEAARSLGMPYPLAMRRIILPQAFRLSLPPLGNQFIIGLKDSSLVAYVGLSELWGSG 171 Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 +I Q ++ +I YL L ++ F+N L ++ KE Sbjct: 172 LSIAAGNFQQLDTYIIVGVYYLVLVLLFTYFVNLLEKRLQRKE 214 >gi|290580364|ref|YP_003484756.1| putative amino acid ABC transporter permease [Streptococcus mutans NN2025] gi|254997263|dbj|BAH87864.1| putative amino acid ABC transporter permease protein [Streptococcus mutans NN2025] Length = 217 Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 72/230 (31%), Positives = 115/230 (50%), Gaps = 18/230 (7%) Query: 169 MFLNN----RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224 MF+N + LSF + I V SF+ G +L +F + L R ++L +YI Sbjct: 1 MFINFHLIIKSLSFVLTGIPYTLGISVLSFLTGCLLGIFISFL-RMSQNSWLRSLARIYI 59 Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284 S ++ G+P LV++ + L+F P + YI S +AA+I+EI Sbjct: 60 S--IMRGVPMLVVL---FVLYFGLPYF--------EVQLSALLCAYIGFSAVSAAYISEI 106 Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344 R+ + AV +GQ EAA ALGL + ++LPQA R I PL + L++LK+SSLA + Sbjct: 107 FRASVSAVDKGQWEAARALGLPMTSILKSIILPQAFRIAIAPLGNVMLDILKSSSLAAMI 166 Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394 D+ I + + + ++ FIY L + +F N L AK+++ Sbjct: 167 TVPDIFQNAKIIGGREYDYMSMYILIAFIYWLLCFLFEMFQNHLEAKLSV 216 >gi|229068107|ref|ZP_04201414.1| Amino acid ABC transproter, permease [Bacillus cereus F65185] gi|229077711|ref|ZP_04210341.1| Amino acid ABC transproter, permease [Bacillus cereus Rock4-2] gi|229176944|ref|ZP_04304339.1| Amino acid ABC transproter, permease [Bacillus cereus 172560W] gi|228606419|gb|EEK63845.1| Amino acid ABC transproter, permease [Bacillus cereus 172560W] gi|228705652|gb|EEL58008.1| Amino acid ABC transproter, permease [Bacillus cereus Rock4-2] gi|228714921|gb|EEL66789.1| Amino acid ABC transproter, permease [Bacillus cereus F65185] Length = 251 Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 74/223 (33%), Positives = 117/223 (52%), Gaps = 19/223 (8%) Query: 177 SFPTLTMDT--NAKIFVFSFVLGIVLSL-FATRLSRHFHEKTGKALPLLYISTFLIFGLP 233 ++PTL T ++ + S VLG ++ L FA R + K ++ +YI+ +I G P Sbjct: 29 TYPTLLKATIVTLQLTLTSLVLGSLIGLLFA--FFRISNNKVLNSIAHIYIA--IIRGTP 84 Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293 +V IA+ Y F SP F + IAL+ + A+I EI R + +V Sbjct: 85 LIVQIAILY-----------FGITSVIVFSP-FWAGAIALAIHNGAYITEIFRGSIQSVD 132 Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353 RGQ+EAA +LG+ + A R ++LPQA R +PPL +Q++ LK+SSL VG ++L G Sbjct: 133 RGQLEAARSLGMPYPLAMRRIILPQAFRLSLPPLGNQFIIGLKDSSLVAYVGLSELWGSG 192 Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 +I Q ++ +I YL L ++ F+N L ++ KE Sbjct: 193 LSIAAGNFQQLDTYIIVGVYYLVLVLLFTYFVNLLEKRLQRKE 235 >gi|228950910|ref|ZP_04113032.1| Amino acid ABC transproter, permease [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228808758|gb|EEM55255.1| Amino acid ABC transproter, permease [Bacillus thuringiensis serovar kurstaki str. T03a001] Length = 251 Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 73/224 (32%), Positives = 117/224 (52%), Gaps = 21/224 (9%) Query: 177 SFPTLTMDT--NAKIFVFSFVLGIVLSLFAT--RLSRHFHEKTGKALPLLYISTFLIFGL 232 ++PTL T ++ + S VLG ++ L R+S + K ++ +YI+ +I G Sbjct: 29 TYPTLLKATIVTLQLTLTSLVLGSLIGLLFAFFRIS---NNKVLNSIAHIYIA--IIRGT 83 Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292 P +V IA+ Y F SP F + IAL+ + A+I EI R + +V Sbjct: 84 PLIVQIAILY-----------FGITSVIVFSP-FWAGAIALAIHNGAYITEIFRGSIQSV 131 Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352 RGQ+EAA +LG+ + A R ++LPQA R +PPL +Q++ LK+SSL VG ++L Sbjct: 132 DRGQLEAARSLGMPYPLAMRRIILPQAFRLSLPPLGNQFIIGLKDSSLVAYVGLSELWGS 191 Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 G +I Q ++ +I YL L ++ F+N L ++ KE Sbjct: 192 GLSIAAGNFQQLDTYIIVGVYYLVLVLLFTYFVNLLEKRLQRKE 235 >gi|121610275|ref|YP_998082.1| polar amino acid ABC transporter inner membrane subunit [Verminephrobacter eiseniae EF01-2] gi|121554915|gb|ABM59064.1| polar amino acid ABC transporter, inner membrane subunit [Verminephrobacter eiseniae EF01-2] Length = 217 Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 58/168 (34%), Positives = 90/168 (53%), Gaps = 11/168 (6%) Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290 G P L+ + L + F P+LG VSP +++ IAL T+AF+ EI R + Sbjct: 61 GTPLLMQLFLAF---FGAPILG-------FEVSP-WLAASIALILNTSAFLGEIWRGCIQ 109 Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 A+P+GQ EAA ALGL + RLV+LPQA + +PP + +LK +SLA +GF ++ Sbjct: 110 AIPKGQWEAAYALGLNYVPRMRLVVLPQAWQIALPPTVGYLVQVLKGTSLAAIIGFTEIT 169 Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 G I N T Q + + + IY +L ++L R+ ++ L + Sbjct: 170 RAGQIINNATFQPLIVFSVVGAIYFALCWPLSLLAGRMERQLKLATTR 217 >gi|17545202|ref|NP_518604.1| glutamate/aspartate transmembrane ABC transporter protein [Ralstonia solanacearum GMI1000] gi|17427493|emb|CAD14011.1| probable glutamate/aspartate transmembrane abc transporter protein [Ralstonia solanacearum GMI1000] Length = 227 Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 44/125 (35%), Positives = 77/125 (61%) Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327 S +A + + AA+ +EI+R+G+ +V RGQM AA A+G+T+ +A RLV+LPQA R++IP L Sbjct: 101 SALVAFALFEAAYYSEIIRAGIQSVSRGQMFAAYAMGMTYGQAMRLVILPQAFRNMIPLL 160 Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387 +Q + L +++SL +D + I + G+ +E++L F Y + ++ + R Sbjct: 161 LTQAIILFQDTSLVYVSALSDFFTQAYNIGERDGRIVELLLFAGFCYFVICFGASVLVKR 220 Query: 388 LNAKI 392 L K+ Sbjct: 221 LQKKV 225 Score = 37.0 bits (84), Expect = 5.0, Method: Compositional matrix adjust. Identities = 27/71 (38%), Positives = 37/71 (52%), Gaps = 15/71 (21%) Query: 86 ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145 ATAILVG V W GTL+ RLS K + W + YV +FR+IP ++V+ Sbjct: 30 ATAILVGIV---W------------GTLLAMMRLSGIKPLQWFGQAYVNLFRSIPLVMVL 74 Query: 146 FFLYKSVLSVL 156 + + V VL Sbjct: 75 LWFFLIVPQVL 85 >gi|56807954|ref|ZP_00365770.1| COG0765: ABC-type amino acid transport system, permease component [Streptococcus pyogenes M49 591] Length = 227 Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 56/187 (29%), Positives = 104/187 (55%), Gaps = 12/187 (6%) Query: 214 KTGKALPLLYISTFLIF---GLPTLVLIALKYQ-LHFDKPVLGQFNFIGGSTVSPEFMSL 269 K PL ++ ++ G P +V I + + +HF+ IG + +F L Sbjct: 41 KRSHVKPLTWVVNLYVWIFRGTPMVVQIMIAFAWMHFNN-----MPTIGFGVLDLDFSRL 95 Query: 270 Y---IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326 I +S + A+I+EIVR+G+ AVP+GQ+EAA +LG+ + A R V+LPQA ++I+P Sbjct: 96 LPGIIIISLNSGAYISEIVRAGIEAVPKGQLEAAYSLGIRPQNAMRYVILPQAFKNILPA 155 Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386 L ++++ ++K+S+L +G +L + +++ T I +L+ F YL ++ ++A + Sbjct: 156 LGNEFITIIKDSALLQTIGVMELWNGAQSVVTATYSPISPLLVAAFYYLMVTTVMAQLLA 215 Query: 387 RLNAKIA 393 L +A Sbjct: 216 VLERHMA 222 >gi|56962547|ref|YP_174273.1| glutamine ABC transporter permease [Bacillus clausii KSM-K16] gi|56908785|dbj|BAD63312.1| glutamine ABC transporter permease [Bacillus clausii KSM-K16] Length = 217 Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 47/134 (35%), Positives = 84/134 (62%), Gaps = 2/134 (1%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G VSP F++ +AL+ + A I+EI+RSGL ++P+GQ+EAA + GLT+ + R +L+PQ Sbjct: 83 GFQVSP-FVAAIVALTVFEGAMISEIIRSGLNSIPKGQIEAARSSGLTYTQTLRAILIPQ 141 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI-YLSL 377 A R ++PP SQ++ LLK++SLAV + +++ + ++ IL ++ + Y + Sbjct: 142 AARKMMPPTVSQFIALLKDTSLAVIITLPEVMHHARILSAHNSNSVFAILFFVAVMYFVV 201 Query: 378 SIMIALFMNRLNAK 391 + ++ +L AK Sbjct: 202 NFALSKIAKKLEAK 215 >gi|330967849|gb|EGH68109.1| glutamine/glutamate ABC transporter permease [Pseudomonas syringae pv. actinidiae str. M302091] Length = 219 Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 46/112 (41%), Positives = 70/112 (62%), Gaps = 3/112 (2%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P F + LS + A+ + E++R GL ++PRGQ EA +A+GL + VLLPQA++ + Sbjct: 88 PAFWCAVLVLSLWGASEVGEVMRGGLRSIPRGQREAGLAIGLGLGQLYGRVLLPQALKRL 147 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375 PP+ + Y L+K SSLAV +G D+ VG II +T E +LI+ F++L Sbjct: 148 TPPVINVYTRLIKTSSLAVLIGVIDITKVGQQIIERT---YESVLIYGFLFL 196 >gi|289671692|ref|ZP_06492582.1| glutamine ABC transporter, permease protein [Pseudomonas syringae pv. syringae FF5] Length = 237 Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 55/148 (37%), Positives = 87/148 (58%), Gaps = 4/148 (2%) Query: 232 LPTLVLIALKYQLHFDKP-VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290 +PTLV + L Y F P +L + I + S E++ IAL AA+ +E +RSGL Sbjct: 73 VPTLVQLMLWY---FGIPTLLSESTQIWLANYSTEYLFSVIALGLCQAAYFSEDIRSGLR 129 Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 A+P GQ+EA+ ALGL + ++ R V+LPQ +R+ +P L + + L KN+SL +A+G +L Sbjct: 130 AIPAGQVEASRALGLGYVRSMRYVILPQGVRNCLPSLINHTVLLFKNTSLVMAIGVVELT 189 Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLS 378 + N T + E L+ +YL++S Sbjct: 190 YATREVENYTFRTFEAYLVATVVYLAIS 217 >gi|732704|emb|CAA57063.1| gluD [Corynebacterium glutamicum] Length = 273 Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 57/166 (34%), Positives = 94/166 (56%), Gaps = 11/166 (6%) Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247 K VFS +L +V+ A L R + + + I TF +P L+L+ YQ+ Sbjct: 35 KSAVFSVILALVMGT-ALGLGRISEIRILRWFCAVIIETFR--AIPVLILMIFAYQM--- 88 Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307 Q+N + S + F ++ L+ Y + IAEI+ SG+ ++P+GQ EAAIALG++ Sbjct: 89 ---FAQYNIVPSSQLV--FAAVVFGLTMYNGSVIAEILCSGIASLPKGQKEAAIALGMSS 143 Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353 R+ T +LLPQA+ +++P L SQ + LK+S+L +G+ ++V G Sbjct: 144 RQTTWSILLPQAVAAMLPALISQMVIALKDSALGYQIGYIEVVRSG 189 Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 31/99 (31%), Positives = 52/99 (52%), Gaps = 3/99 (3%) Query: 78 PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137 P+ + ++ T IL G T A +I A ++GT +G GR+S +++ W C V +E FR Sbjct: 15 PFINSQTWTTYILPGLWGTLKSAVFSVILALVMGTALGLGRISEIRILRWFCAVIIETFR 74 Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIVLP---FGMFLNN 173 IP L+++ F Y+ +P +V FG+ + N Sbjct: 75 AIPVLILMIFAYQMFAQYNIVPSSQLVFAAVVFGLTMYN 113 >gi|330980534|gb|EGH78637.1| glutamine ABC transporter permease [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 233 Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 55/148 (37%), Positives = 87/148 (58%), Gaps = 4/148 (2%) Query: 232 LPTLVLIALKYQLHFDKP-VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290 +PTLV + L Y F P +L + I + S E++ IAL AA+ +E +RSGL Sbjct: 69 VPTLVQLMLWY---FGIPTLLSESTQIWLANYSTEYLFSVIALGLCQAAYFSEDIRSGLR 125 Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 A+P GQ+EA+ ALGL + ++ R V+LPQ +R+ +P L + + L KN+SL +A+G +L Sbjct: 126 AIPAGQVEASRALGLGYVRSMRYVILPQGVRNCLPSLINHTVLLFKNTSLVMAIGVVELT 185 Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLS 378 + N T + E L+ +YL++S Sbjct: 186 YATREVENYTFRTFEAYLVATVVYLAIS 213 >gi|228919286|ref|ZP_04082656.1| Amino acid ABC transproter, permease [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228840393|gb|EEM85664.1| Amino acid ABC transproter, permease [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 251 Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 74/223 (33%), Positives = 117/223 (52%), Gaps = 19/223 (8%) Query: 177 SFPTLTMDT--NAKIFVFSFVLGIVLSL-FATRLSRHFHEKTGKALPLLYISTFLIFGLP 233 ++PTL T ++ + S VLG ++ L FA R + K ++ +YI+ +I G P Sbjct: 29 TYPTLLKATIVTLQLTLTSLVLGSLIGLLFA--FFRISNNKVLNSIAHIYIA--IIRGTP 84 Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293 +V IA+ Y F SP F + IAL+ + A+I EI R + +V Sbjct: 85 LIVQIAILY-----------FGITSVIVFSP-FWAGAIALAIHNGAYITEIFRGSIQSVD 132 Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353 RGQ+EAA +LG+ + A R ++LPQA R +PPL +Q++ LK+SSL VG ++L G Sbjct: 133 RGQLEAARSLGMPYPLAMRRIILPQAFRLSLPPLGNQFIIGLKDSSLVAYVGLSELWGSG 192 Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 +I Q ++ +I YL L ++ F+N L ++ KE Sbjct: 193 LSIAAGNFQQLDTYIIVGVYYLVLVLLFTYFVNLLEKRLQRKE 235 >gi|282861062|ref|ZP_06270127.1| polar amino acid ABC transporter, inner membrane subunit [Streptomyces sp. ACTE] gi|282563720|gb|EFB69257.1| polar amino acid ABC transporter, inner membrane subunit [Streptomyces sp. ACTE] Length = 322 Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 58/171 (33%), Positives = 93/171 (54%), Gaps = 5/171 (2%) Query: 231 GLPTLVLIALKYQLHFDKPVLG-QFNFIGGST-VSPEFMSLYIALSCYTAAFIAEIVRSG 288 G P V + L + L P+L F + T V FM + L AA++AEI R+G Sbjct: 126 GTPVYVQLLLWFNLALVFPILNIPFVYKDEMTDVMTPFMCALLGLGLNEAAYMAEICRAG 185 Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348 + +V GQ EA+ ALG+T K R V+LPQA+R IIPP ++++N+LK SSL AV + + Sbjct: 186 IQSVDEGQTEASHALGMTQAKTMRRVVLPQALRVIIPPTGNEFINMLKTSSLVYAVTYNE 245 Query: 349 LVSVGGTIINQTGQAIEIIL---IWMFIYLSLSIMIALFMNRLNAKIALKE 396 L+ I + + +E++ IW + S+ + ++ R A+ +L+ Sbjct: 246 LLRSTSQIGSTSYAVMEMLFVASIWYIVMTSIFSVGQYYLERRYARGSLRS 296 >gi|262044227|ref|ZP_06017295.1| polar amino acid ABC superfamily ATP binding cassette transporter, permease protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|259038418|gb|EEW39621.1| polar amino acid ABC superfamily ATP binding cassette transporter, permease protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 254 Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 45/126 (35%), Positives = 75/126 (59%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+S +A++ A+++EI R+G+ ++ +GQMEA+ ALG+ K R V+L QA R I+P Sbjct: 122 FLSCIVAITLNAGAYVSEIFRAGIQSIDKGQMEASRALGMPWWKTMRKVILLQAFRRILP 181 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PL + + ++K+SSLA A+G ADL T+ E L +Y ++ ++A + Sbjct: 182 PLGNNAIAIVKDSSLASAIGLADLAYAARTVSGAYATYWEPYLTISLVYWVITFLLAQLV 241 Query: 386 NRLNAK 391 NRL + Sbjct: 242 NRLEKR 247 >gi|6560693|gb|AAF16724.1|AF141644_1 putative integral membrane protein [Lactococcus lactis] Length = 191 Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 56/170 (32%), Positives = 93/170 (54%), Gaps = 31/170 (18%) Query: 167 FGMFLNN-----RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR------HFHEKT 215 FG+ NN RGL +T++ F+ + ++GI+ LF+ S+ + Sbjct: 41 FGILQNNWEQIGRGL---LVTLELAVLSFILAMIVGIIFGLFSVAPSKILRTIARIYVDL 97 Query: 216 GKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSC 275 +++PLL ++ F+ +G+P L+ I +Q + EF + IAL+ Sbjct: 98 NRSIPLLVLTIFIFYGIPNLLQIITGHQSPLN-----------------EFTAGVIALTL 140 Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 ++A+IAEIVRSG+ AVP GQMEA+ +LG+T+ + R V+LPQA++ IP Sbjct: 141 NSSAYIAEIVRSGVQAVPSGQMEASRSLGVTYLTSMRKVILPQAIKITIP 190 Score = 37.0 bits (84), Expect = 5.2, Method: Compositional matrix adjust. Identities = 22/67 (32%), Positives = 40/67 (59%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151 G + T LA I A I+G + G ++ +K++ I R+YV++ R+IP LV+ F++ Sbjct: 54 GLLVTLELAVLSFILAMIVGIIFGLFSVAPSKILRTIARIYVDLNRSIPLLVLTIFIFYG 113 Query: 152 VLSVLPI 158 + ++L I Sbjct: 114 IPNLLQI 120 >gi|78358109|ref|YP_389558.1| amino acid ABC transporter permease [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78220514|gb|ABB39863.1| amino acid ABC transporter membrane protein 2, PAAT family [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 292 Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 43/130 (33%), Positives = 77/130 (59%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + + L+ Y A+IAEIVR+G+ +VPRGQ EA+ +LG RLV+ PQA++ IIP Sbjct: 162 FTAGVLTLAIYEGAYIAEIVRAGVESVPRGQWEASASLGFGRFDMLRLVIFPQALKVIIP 221 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PL Q+++ +K+S++ + +L G ++ T + E+ +YL L++ +L Sbjct: 222 PLAGQFISTIKDSAIVSVISVQELTFQGLELMASTFRTFEVWTTIALLYLMLTLFCSLLA 281 Query: 386 NRLNAKIALK 395 ++ A++ + Sbjct: 282 RKVEARLRWR 291 Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust. Identities = 29/88 (32%), Positives = 47/88 (53%), Gaps = 6/88 (6%) Query: 68 AGFE-----IDQGIVPYTSDSSYATAILV-GFVNTFWLAFSGMIPATIIGTLVGAGRLSA 121 AG++ I Q + + + + +LV G + T L+ + A + GTL G R+S Sbjct: 34 AGYDWQWHVIWQYFFRHDAQAGWVPNLLVQGLLTTIRLSIWATLLAVVFGTLAGLARVSR 93 Query: 122 NKLVAWICRVYVEVFRNIPPLVVIFFLY 149 ++L + R YVE RN+PPLV++F Y Sbjct: 94 SRLRRMLARTYVESVRNLPPLVLVFIFY 121 >gi|229083879|ref|ZP_04216188.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus Rock3-44] gi|228699457|gb|EEL52133.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus Rock3-44] Length = 214 Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 43/94 (45%), Positives = 69/94 (73%), Gaps = 3/94 (3%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +AL+ + AA I+EIVRSGL+++ +GQ+EAA A GL++ + ++LPQA+R ++PPL SQ Sbjct: 93 VALTIFEAAMISEIVRSGLLSIEKGQIEAARASGLSYAQTLWYIILPQALRRMVPPLVSQ 152 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364 +++LLK++SLAV + +L+ IIN GQ + Sbjct: 153 FISLLKDTSLAVVISLPELMH-NAQIIN--GQNV 183 Score = 36.6 bits (83), Expect = 7.5, Method: Compositional matrix adjust. Identities = 19/54 (35%), Positives = 34/54 (62%) Query: 96 TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 T +A ++ + IIG++VG R + +V+ + + VE+ RN+P L++IFF Y Sbjct: 22 TLEIAVIAILLSFIIGSVVGTLRYTKIPVVSQLLALIVEIIRNLPLLLIIFFTY 75 >gi|310642316|ref|YP_003947074.1| amino acid abc transporter, permease protein, his/glu/gln/arg/opine family [Paenibacillus polymyxa SC2] gi|309247266|gb|ADO56833.1| Amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Paenibacillus polymyxa SC2] Length = 487 Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 68/205 (33%), Positives = 113/205 (55%), Gaps = 23/205 (11%) Query: 191 VFSFVLGIVLSLFATRLSR-HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249 +F F++G+++SL R+S E G A Y+ ++ G P LV + + +H+ Sbjct: 297 LFGFIIGLIISLL--RMSGIRIIEWLGTA----YVE--ILRGTPMLVQLMI---IHYGVA 345 Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309 + NF +P S I LS ++A++AEI R+G+ AV RGQMEAA +LG+ K Sbjct: 346 LTLGVNF------TP-LQSGIITLSLNSSAYLAEIFRAGIQAVDRGQMEAARSLGMGRGK 398 Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369 A R V+LPQA +SI+P + ++++ ++K SS+ +G D++ I N T + + +I Sbjct: 399 AMRHVILPQAFKSILPAIGNEFITIIKESSIISTIGMVDIMYQAQVIKNITYEGLSPFVI 458 Query: 370 WMFIY----LSLSIMIALFMNRLNA 390 IY SLS ++ L+ +L A Sbjct: 459 AAAIYFVMTFSLSKLLGLWERKLRA 483 >gi|322376376|ref|ZP_08050869.1| amino acid ABC transporter, permease protein [Streptococcus sp. M334] gi|321282183|gb|EFX59190.1| amino acid ABC transporter, permease protein [Streptococcus sp. M334] Length = 227 Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 60/210 (28%), Positives = 118/210 (56%), Gaps = 21/210 (10%) Query: 195 VLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF---GLPTLVLIALKYQL-HFDKPV 250 +LG+VL+ F +++ K PL++ + ++ G P +V I + + L H + P Sbjct: 33 ILGVVLA---------FGQRS-KFKPLVWFANLYVWIFRGTPMMVQIMIAFALMHINAPT 82 Query: 251 LGQFNFIGG--STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308 + Q +G S + P + +S + A+++E VR+G+ AVP+GQ+EAA +LG+ + Sbjct: 83 I-QVGILGVDFSRLIPGIL----IISMNSGAYVSETVRAGINAVPKGQLEAAYSLGIRPK 137 Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368 A R V+LPQA+++I+P L ++++ ++K+SSL A+G +L + T+ T + +L Sbjct: 138 NAMRYVILPQAIKNILPALGNEFITIIKDSSLLSAIGVMELWNGATTVSTTTYLPLTPLL 197 Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 F YL ++ ++ + + ++ +KK Sbjct: 198 FAAFYYLIMTSILTVALKAFEKRMGQGDKK 227 >gi|308069275|ref|YP_003870880.1| Probable amino-acid ABC transporter extracellular binding protein yqiX precursor [Paenibacillus polymyxa E681] gi|305858554|gb|ADM70342.1| Probable amino-acid ABC transporter extracellular binding protein yqiX precursor [Paenibacillus polymyxa E681] Length = 487 Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 65/204 (31%), Positives = 111/204 (54%), Gaps = 21/204 (10%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 +F F++G+++SL R + + L Y+ ++ G P LV + + +H+ + Sbjct: 297 LFGFIIGLIISLL-----RMSGVRIIEWLGTTYVE--ILRGTPMLVQLMI---IHYGVAL 346 Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 NF +P S I LS ++A++AEI R+G+ AV RGQMEAA +LG+ KA Sbjct: 347 TLGVNF------TP-LQSGIITLSLNSSAYLAEIFRAGIQAVDRGQMEAARSLGMGRGKA 399 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370 R V+LPQA +SI+P + ++++ ++K SS+ +G D++ I N T + + +I Sbjct: 400 MRHVILPQAFKSILPAIGNEFITIIKESSIISTIGMVDIMYQAQVIKNITYEGLSPFVIA 459 Query: 371 MFIY----LSLSIMIALFMNRLNA 390 IY SLS ++ L+ +L A Sbjct: 460 AAIYFVMTFSLSKLLGLWERKLRA 483 >gi|154508733|ref|ZP_02044375.1| hypothetical protein ACTODO_01241 [Actinomyces odontolyticus ATCC 17982] gi|153798367|gb|EDN80787.1| hypothetical protein ACTODO_01241 [Actinomyces odontolyticus ATCC 17982] Length = 320 Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 64/182 (35%), Positives = 100/182 (54%), Gaps = 23/182 (12%) Query: 224 ISTFLIFG--LPTLVLIALKYQLHFDKPVLG-----QFNFIGGSTVSPEFMSLYIALSCY 276 I T LIF LPTL +L F P LG + F + +P +M+ +I L Sbjct: 111 IYTQLIFWSLLPTLYP-----KLSFGVPFLGSLWGWELTFDTATYFTPFWMA-FIGLGLN 164 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 A++AEI+R+GL++VP+GQ EAA ALG+ R ++LPQAMR I+PP+ ++ +++LK Sbjct: 165 EGAYLAEIMRAGLLSVPKGQWEAATALGMPRGTIFRRIILPQAMRVIVPPIGNETISMLK 224 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQA----IEIIL---IWMFIYLSLSIMIALFMNRLN 389 +SL A+ F ++ I Q GQA + +++ IW + SL + I F+ + Sbjct: 225 TTSLVSAIPFTLELTF---IARQRGQATFAPVPLLIAAAIWYLVITSLLMWIQSFIEKYY 281 Query: 390 AK 391 K Sbjct: 282 GK 283 >gi|319944973|ref|ZP_08019235.1| amino acid ABC superfamily ATP binding cassette transporter transmembrane protein [Lautropia mirabilis ATCC 51599] gi|319741543|gb|EFV93968.1| amino acid ABC superfamily ATP binding cassette transporter transmembrane protein [Lautropia mirabilis ATCC 51599] Length = 262 Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 48/134 (35%), Positives = 81/134 (60%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 +F S +AL+ A+ AE +R+GL+AVPRGQ EAA +LGL++ V+ PQA + + Sbjct: 128 DFTSACVALAFNAGAYNAESIRAGLLAVPRGQTEAARSLGLSNWHTFWDVIFPQAFKIAL 187 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 PPL + ++ LLK+SSLA A+G +L +V I + T Q I ++ IYL L+ ++ Sbjct: 188 PPLVNNFIALLKDSSLAYAIGVVELTNVANRIQSSTFQPIPPLVTAAVIYLLLTTVLTQI 247 Query: 385 MNRLNAKIALKEKK 398 + ++ ++ ++ Sbjct: 248 STAVEHRMDVEGRQ 261 >gi|258405216|ref|YP_003197958.1| polar amino acid ABC transporter, inner membrane subunit [Desulfohalobium retbaense DSM 5692] gi|257797443|gb|ACV68380.1| polar amino acid ABC transporter, inner membrane subunit [Desulfohalobium retbaense DSM 5692] Length = 227 Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 60/208 (28%), Positives = 107/208 (51%), Gaps = 33/208 (15%) Query: 192 FSFVLGIVLSLFATRLSR--------HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243 F F+LG+ L RLS+ + ++ + PL+ FL FGLP +AL + Sbjct: 36 FGFILGVTAGLL--RLSKVTAIKKVSGIYVESVRGTPLMVQVMFLYFGLP----MALGMR 89 Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 + P + +A++ + A+IAEIVR + ++ GQ+EA ++ Sbjct: 90 I-------------------PPLTAGIVAIAVNSGAYIAEIVRGAVQSIEPGQVEAGRSI 130 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363 GLT + R ++ PQA + +IPPL +Q++ LK++SL V +G +L G II +A Sbjct: 131 GLTAPQTMRYIVWPQAFKRMIPPLGNQFIISLKDTSLLVVIGVGELTRSGQEIIAVNFRA 190 Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAK 391 E+ L +YL++++ I+ F+ + ++ Sbjct: 191 FEVWLTVAVMYLAITMGISKFLRIIESR 218 >gi|171778684|ref|ZP_02919780.1| hypothetical protein STRINF_00632 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] gi|171282641|gb|EDT48065.1| hypothetical protein STRINF_00632 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] Length = 228 Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 55/178 (30%), Positives = 105/178 (58%), Gaps = 14/178 (7%) Query: 223 YISTFLIF---GLPTLVLIALKYQ-LHF-DKPVLGQFNFIGGSTVSPEFMSLY---IALS 274 +I++F ++ G P +V I + + +HF + P IG + +F L I +S Sbjct: 51 WIASFYVWVFRGTPMVVQIMIAFAWMHFSNAPT------IGFGVLDLDFSRLLPGIIIIS 104 Query: 275 CYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNL 334 + A+I+EIVR+G+ AVP+GQ+EAA +LG+ A R V+LPQA+++I+P L ++++ + Sbjct: 105 LNSGAYISEIVRAGIEAVPKGQLEAAYSLGIRPVNAMRYVILPQALKNILPALGNEFITI 164 Query: 335 LKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 +K+SSL +G +L + +++ T I +L F YL ++ +++ + +L ++ Sbjct: 165 IKDSSLLQTIGVMELWNGAQSVVTATYLPITPLLFAAFYYLMVTTVLSFLLKKLENRM 222 >gi|239983305|ref|ZP_04705829.1| glutamate transporter permease [Streptomyces albus J1074] Length = 214 Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 52/128 (40%), Positives = 78/128 (60%), Gaps = 7/128 (5%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +AL CYT+AFI E +RSG+ VPRGQ EAA +LG+T + V+LPQA RS+I P+ S Sbjct: 89 LALGCYTSAFICEALRSGINTVPRGQGEAARSLGMTFGQTLSAVVLPQAFRSVIAPVGST 148 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 + L KNS++A A +L+ T +++ G I IW F++++L +I ++A Sbjct: 149 LIALAKNSAIAGAFSVTELLGTYRT-LSELGYNI----IWTFVWIALGYLIITLT--ISA 201 Query: 391 KIALKEKK 398 L EK+ Sbjct: 202 LFHLMEKR 209 >gi|254440026|ref|ZP_05053520.1| ABC transporter, permease protein, putative [Octadecabacter antarcticus 307] gi|198255472|gb|EDY79786.1| ABC transporter, permease protein, putative [Octadecabacter antarcticus 307] Length = 265 Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 67/222 (30%), Positives = 115/222 (51%), Gaps = 23/222 (10%) Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFL------------IFGLPTLVLIALKYQL 244 GI +++F T + G L L+ +S F+ + G+P +VL+ L Sbjct: 44 GIWITVFVTLVGFTLAASIGLGLALMSMSRFIALRQIARLYTEIVRGVPIIVLL-LYVAF 102 Query: 245 HFDKPVLGQFNFIGG-----STVSPEFMSLY---IALSCYTAAFIAEIVRSGLIAVPRGQ 296 ++ FN+I G + +F L+ IAL+ +AFIAE+ R+GL ++ +GQ Sbjct: 103 VLAPGMVALFNWITGILGFDPIRNRDFSLLWRAIIALTIGYSAFIAEVFRAGLQSIEKGQ 162 Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356 +EAA ALGL+ + R ++ PQA R I+PPL + ++ ++K+SSL +G D+ G Sbjct: 163 IEAAEALGLSPWRRFRHIVFPQAFRRILPPLGNDFIAMVKDSSLVSVLGVLDVTQAGKIT 222 Query: 357 INQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 + E + IYL+++I ++L + RL + L+EK Sbjct: 223 AAGNFRYFETYNVVALIYLTMTIGLSLALRRLERQ--LREKS 262 >gi|77459313|ref|YP_348820.1| amino acid ABC transporter permease [Pseudomonas fluorescens Pf0-1] gi|77383316|gb|ABA74829.1| amino acid ABC transporter membrane protein 1, PAAT family [Pseudomonas fluorescens Pf0-1] Length = 220 Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 63/207 (30%), Positives = 112/207 (54%), Gaps = 20/207 (9%) Query: 193 SFVLGIVLSLFAT--RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 S +G V+ L LSRH + + L +Y++ +I P LVLI L Y F P Sbjct: 31 SIAIGCVIGLLMAFALLSRH---RALRVLASVYVT--VIRNTPILVLILLIY---FALPS 82 Query: 251 LG-QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309 LG + + I P F+ I LS Y A++ E+ R GL+++P+GQ EA +A+GL + Sbjct: 83 LGIRLDKI------PSFI---ITLSLYAGAYLTEVFRGGLLSIPKGQREAGLAIGLGEWQ 133 Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369 V +P +R+++P L++ +++L K++SLA A+ +L I ++ + IE L+ Sbjct: 134 VKAYVTVPVMLRNVLPALSNNFISLFKDTSLAAAIAVPELTYYARKINVESYRVIETWLV 193 Query: 370 WMFIYLSLSIMIALFMNRLNAKIALKE 396 +Y++ +IA+ + L ++A++ Sbjct: 194 TTALYVAACYLIAMLLRYLEQRLAIRR 220 >gi|27381500|ref|NP_773029.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] gi|27354668|dbj|BAC51654.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] Length = 218 Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 47/133 (35%), Positives = 78/133 (58%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+++ I + +AF+ EI R + AVPRGQ EAA+ALGL + R ++LPQA+R +P Sbjct: 86 FVAVAIGFTVNASAFLGEIWRGAIQAVPRGQTEAAMALGLHYSSRMRDIVLPQAIRISLP 145 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 + L+K +SLA VGF +L G + NQT Q + + + +Y L ++ + Sbjct: 146 ATIGYLVQLIKGTSLAAIVGFIELARAGQIVSNQTFQPLLVFGVVGAMYFILCWPLSWWG 205 Query: 386 NRLNAKIALKEKK 398 +R+ A++AL ++ Sbjct: 206 SRMEARLALASQR 218 >gi|253990628|ref|YP_003041984.1| glutamate/aspartate transport system permease protein gltk [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253782078|emb|CAQ85242.1| glutamate/aspartate transport system permease protein gltk [Photorhabdus asymbiotica] Length = 224 Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 69/212 (32%), Positives = 116/212 (54%), Gaps = 18/212 (8%) Query: 186 NAKIFVFSFVLGIVLSLFATRLS--RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243 AKI + + V+GI L+ T L+ R K LY++ F +P LV++ L + Sbjct: 23 TAKITIIAVVVGI---LWGTALAVMRLSSVKVLSWFATLYVNLFR--SVP-LVMVLLWFY 76 Query: 244 LHFDKPVLGQFNFIGGSTVSPE----FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299 L P L Q N +G +SP+ +S +A + + AA+ +EI+R+G+ ++ RGQ A Sbjct: 77 LIV--PSLVQ-NVLG---ISPKTDIRLISAMVAFAFFEAAYYSEIIRAGIQSISRGQSSA 130 Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359 A+ALG+T ++ RLV+LPQA R++ P L +Q + L +++SL + AD I + Sbjct: 131 ALALGMTPMQSMRLVILPQAFRAMTPLLLTQGIVLFQDTSLVYVLSLADFFRTAANIGER 190 Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 G +E+IL +Y +SI ++ +N L + Sbjct: 191 DGTQVEMILFAGLVYFIISIAASMLVNYLKKR 222 Score = 36.6 bits (83), Expect = 6.5, Method: Compositional matrix adjust. Identities = 22/79 (27%), Positives = 43/79 (54%), Gaps = 7/79 (8%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G V T + ++ + GT + RLS+ K+++W +YV +FR++P ++V+ + Sbjct: 16 LLQGLVITAKITIIAVVVGILWGTALAVMRLSSVKVLSWFATLYVNLFRSVPLVMVLLWF 75 Query: 149 Y-------KSVLSVLPIPD 160 Y ++VL + P D Sbjct: 76 YLIVPSLVQNVLGISPKTD 94 >gi|239944222|ref|ZP_04696159.1| putative arginine/ornithine ABC transporter permease protein [Streptomyces roseosporus NRRL 15998] gi|239990678|ref|ZP_04711342.1| putative arginine/ornithine ABC transporter permease protein [Streptomyces roseosporus NRRL 11379] gi|291447694|ref|ZP_06587084.1| permease [Streptomyces roseosporus NRRL 15998] gi|291350641|gb|EFE77545.1| permease [Streptomyces roseosporus NRRL 15998] Length = 322 Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 62/181 (34%), Positives = 98/181 (54%), Gaps = 9/181 (4%) Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGG---STVSPEFMSLYIALSCYTA 278 LYI + G P V + L + L PVL FI + V FM + L+ A Sbjct: 119 LYI--WFFRGTPVYVQLLLWFNLALIFPVL-NIPFIYKDEMTDVMTPFMCALLGLALNEA 175 Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338 A++AEI R+G+ +V GQ EA+ ALG+T K R V+LPQA+R IIPP ++++N+LK S Sbjct: 176 AYMAEICRAGIQSVDEGQTEASHALGMTQAKTMRRVVLPQALRVIIPPTGNEFINMLKTS 235 Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIIL---IWMFIYLSLSIMIALFMNRLNAKIALK 395 SL AV + +L+ I + + +E++ IW + S+ + ++ R A+ +L+ Sbjct: 236 SLVYAVTYNELLRSTSQIGSTSYAVMEMLFVASIWYIVMTSVFSVGQYYLERRFARGSLR 295 Query: 396 E 396 Sbjct: 296 S 296 >gi|238063457|ref|ZP_04608166.1| ABC amino acid transporter permease component [Micromonospora sp. ATCC 39149] gi|237885268|gb|EEP74096.1| ABC amino acid transporter permease component [Micromonospora sp. ATCC 39149] Length = 218 Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 64/192 (33%), Positives = 101/192 (52%), Gaps = 37/192 (19%) Query: 191 VFSFVLGIVLSLF------ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244 V S VLG +L A R S + + PL + FL+FG+P K + Sbjct: 31 VGSLVLGTLLGAMRVSPVPALRASGATYVNIVRNTPLTLVFAFLVFGVP-------KLDV 83 Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304 + D F S IAL+ YTAAF+ E++RSG+ V GQ EAA ALG Sbjct: 84 NIDY-----------------FDSACIALTVYTAAFVCEVIRSGVNTVGTGQAEAARALG 126 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI---INQTG 361 +T + L++LPQA+R+++PP+ S ++ +LKN++ +A GF+ L + G I +++ G Sbjct: 127 MTFAQVLTLIVLPQALRAMVPPMMSVFIAMLKNTT--IAAGFSVLEA--GAIPSYMSERG 182 Query: 362 QAIEIILIWMFI 373 + +L+W+ I Sbjct: 183 EPQFAVLLWITI 194 >gi|261823782|ref|YP_003261888.1| polar amino acid ABC transporter inner membrane protein [Pectobacterium wasabiae WPP163] gi|261607795|gb|ACX90281.1| polar amino acid ABC transporter, inner membrane subunit [Pectobacterium wasabiae WPP163] Length = 242 Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 57/223 (25%), Positives = 114/223 (51%), Gaps = 11/223 (4%) Query: 177 SFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV 236 SFP + A V S + G+ ++ T L G LL + +P ++ Sbjct: 17 SFPDGPLGGAALTLVMSLLAGVASAVLGTILGVALAMSRGVWSALLAMVLGFFRAIPVIM 76 Query: 237 LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296 LI + +F P++ + PE ++ AL+ +A++A V++G++A+ RGQ Sbjct: 77 LI---FWTYFLLPIVFGVDI-------PEITTVVCALALIASAYLAHGVKAGIVAIGRGQ 126 Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356 +A ++LGL+ + ++LPQA+R ++P +Q+++L+K++SLA VG +L + + Sbjct: 127 WQAGLSLGLSRWQVLWQIVLPQALRMMVPSFINQWISLIKDTSLAYIVGVGELTFLATQV 186 Query: 357 INQTG-QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 N++ +E+ L +Y + + L NR+N + ++K+ Sbjct: 187 NNRSMVYPMEVFLFVALVYFVFCLSLELLANRVNVRFNQQQKQ 229 >gi|218895475|ref|YP_002443886.1| putative amino acid ABC transporter, permease protein [Bacillus cereus G9842] gi|228899076|ref|ZP_04063348.1| Amino acid ABC transproter, permease [Bacillus thuringiensis IBL 4222] gi|228963460|ref|ZP_04124618.1| Amino acid ABC transproter, permease [Bacillus thuringiensis serovar sotto str. T04001] gi|218541671|gb|ACK94065.1| putative amino acid ABC transporter, permease protein [Bacillus cereus G9842] gi|228796231|gb|EEM43681.1| Amino acid ABC transproter, permease [Bacillus thuringiensis serovar sotto str. T04001] gi|228860517|gb|EEN04905.1| Amino acid ABC transproter, permease [Bacillus thuringiensis IBL 4222] Length = 230 Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 74/223 (33%), Positives = 117/223 (52%), Gaps = 19/223 (8%) Query: 177 SFPTLTMDT--NAKIFVFSFVLGIVLSL-FATRLSRHFHEKTGKALPLLYISTFLIFGLP 233 S+PTL T ++ + S VLG ++ L FA R + K ++ +YI+ +I G P Sbjct: 8 SYPTLLKATIVTLQLTLTSLVLGSLIGLLFA--FFRISNNKVLNSIAHVYIA--IIRGTP 63 Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293 +V IA+ Y F +P F + IAL+ + A+I EI R + +V Sbjct: 64 LIVQIAILY-----------FGITSVVVFTP-FWAGAIALAIHNGAYITEIFRGSIQSVD 111 Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353 RGQ+EAA +LG+ + A R ++LPQA R +PPL +Q++ LK+SSL VG ++L G Sbjct: 112 RGQLEAARSLGMPYPLAMRRIILPQAFRLSLPPLGNQFIIGLKDSSLVAYVGMSELWGSG 171 Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 +I Q ++ +I YL L ++ F+N L ++ KE Sbjct: 172 LSIAAGNFQQLDTYIIVGAYYLVLVLLFTYFVNLLEKRLQRKE 214 Score = 37.0 bits (84), Expect = 5.1, Method: Compositional matrix adjust. Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 1/74 (1%) Query: 83 SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142 SSY T +L + T L + ++ ++IG L R+S NK++ I VY+ + R P + Sbjct: 7 SSYPT-LLKATIVTLQLTLTSLVLGSLIGLLFAFFRISNNKVLNSIAHVYIAIIRGTPLI 65 Query: 143 VVIFFLYKSVLSVL 156 V I LY + SV+ Sbjct: 66 VQIAILYFGITSVV 79 >gi|300718316|ref|YP_003743119.1| polar amino acid ABC transporter, permease protein [Erwinia billingiae Eb661] gi|299064152|emb|CAX61272.1| polar amino acid ABC transporter, permease protein [Erwinia billingiae Eb661] Length = 231 Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 59/167 (35%), Positives = 96/167 (57%), Gaps = 6/167 (3%) Query: 215 TGKALPLLYISTFLIF--GLPTLVLIALKYQLHFDKP-VLGQFNFIGGSTVSPEFMSLYI 271 T K L + +S ++ + +PTL+ + + Y F P +L + + + + EF+ Sbjct: 48 TNKRLAVFLVSAYVSYHRNVPTLIQLMMWY---FAIPTLLPESVQMWVNDFNAEFLFSMC 104 Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 AL AA+ +E +RSGL A+P GQ EA+ ALG+++ ++ R V+LPQA+R+ +P L + Sbjct: 105 ALGLCQAAYFSEDIRSGLRAIPDGQNEASRALGMSYVRSMRSVILPQAIRNALPSLLNHT 164 Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378 + L KN+SLA+ +G A+L V I NQT + E L+ YL S Sbjct: 165 VLLFKNTSLAMVIGVAELTYVTRDIENQTFRTFEAYLVASVGYLFFS 211 >gi|239813839|ref|YP_002942749.1| polar amino acid ABC transporter inner membrane subunit [Variovorax paradoxus S110] gi|239800416|gb|ACS17483.1| polar amino acid ABC transporter, inner membrane subunit [Variovorax paradoxus S110] Length = 229 Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 72/230 (31%), Positives = 123/230 (53%), Gaps = 13/230 (5%) Query: 173 NRGLSFPTLTMDTN--AKIFVFSFVLGIVLS----LFATRLS--RHFHEKTGKALPLLYI 224 N LSF + +N K F FS +L IV + LF T L+ R ++ A +Y+ Sbjct: 3 NLDLSFYNWDVISNFVVKGFYFSIMLTIVATIGGVLFGTVLALMRLSGKRWLDAPAAIYV 62 Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284 + + +P LV++ L + L F IG + S +S I + AA+ +EI Sbjct: 63 NG--MRSIP-LVMVILWFFLLVPASFYAAFGSIGSNYRSE--ISAVITFIAFEAAYFSEI 117 Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344 +R+G+ ++PRGQ+ A A+G+T+ + RLV+LPQA R+++P L +Q + L +++SL A+ Sbjct: 118 MRAGIQSIPRGQVNAGQAVGMTYGQNMRLVVLPQAFRNMLPVLLTQTIILFQDTSLVYAI 177 Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394 G D++ T G+ IE L+ +Y + ++ + RL+ KIA+ Sbjct: 178 GAYDMLKGFETAGKNFGRPIEAYLLAAVVYFIMCYALSWLVKRLHKKIAI 227 >gi|77459078|ref|YP_348584.1| amino acid ABC transporter permease [Pseudomonas fluorescens Pf0-1] gi|77383081|gb|ABA74594.1| amino acid ABC transporter membrane protein, PAAT family [Pseudomonas fluorescens Pf0-1] Length = 292 Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 53/175 (30%), Positives = 98/175 (56%), Gaps = 2/175 (1%) Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVS--PEFMSLYIALSCYTAAFIAE 283 T+L G P ++ + L + L P +G TVS F++ + LS A+ AE Sbjct: 116 TWLFRGTPLILQLLLWFNLALIFPTIGIPGLFELDTVSLMTPFVAALLGLSINQGAYTAE 175 Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343 +VR+GL++V GQ EAA ++G+ +A R ++LPQAMR IIPP+ ++++ ++K +SLA Sbjct: 176 VVRAGLLSVDTGQYEAAKSIGMPRLQALRRIILPQAMRIIIPPVGNEFIGMVKMTSLASV 235 Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 + +++L+ I + +E++++ YL+ +++ +RL + A K Sbjct: 236 IQYSELLYNAQNIYYANARVMELLIVAGIWYLATVTVLSFGQSRLERRFARGAGK 290 >gi|253575035|ref|ZP_04852374.1| glutamine ABC transporter [Paenibacillus sp. oral taxon 786 str. D14] gi|251845491|gb|EES73500.1| glutamine ABC transporter [Paenibacillus sp. oral taxon 786 str. D14] Length = 216 Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 45/125 (36%), Positives = 79/125 (63%), Gaps = 4/125 (3%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I L+ YT++FIAE +R+G++A+P+GQ EAA + GL++ + ++LPQA++ +IPPL +Q Sbjct: 91 IGLAVYTSSFIAEAIRAGILAIPQGQTEAARSSGLSYVQTMLHIILPQAIKLVIPPLGNQ 150 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE----IILIWMFIYLSLSIMIALFMN 386 ++NL+KNSS+ V DL+ + T + + + L ++ + L LS + ++ Sbjct: 151 FINLIKNSSVLTIVAGLDLMYFADIVNADTYRTFDTYIFVALFYLVLTLPLSYGVRVWER 210 Query: 387 RLNAK 391 RL K Sbjct: 211 RLEKK 215 Score = 36.2 bits (82), Expect = 8.6, Method: Compositional matrix adjust. Identities = 19/67 (28%), Positives = 34/67 (50%) Query: 83 SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142 + Y L GF T + ++ + ++G L+ R++ + + W YVE RNIP L Sbjct: 7 TDYFDVYLEGFRGTVLSSLLALVGSFVLGALIAVFRIAPVRPLRWFGTGYVEFIRNIPLL 66 Query: 143 VVIFFLY 149 +V++ Y Sbjct: 67 LVVYIFY 73 >gi|228906126|ref|ZP_04070015.1| Amino acid ABC transproter, permease [Bacillus thuringiensis IBL 200] gi|228853535|gb|EEM98303.1| Amino acid ABC transproter, permease [Bacillus thuringiensis IBL 200] Length = 230 Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 74/223 (33%), Positives = 117/223 (52%), Gaps = 19/223 (8%) Query: 177 SFPTLTMDT--NAKIFVFSFVLGIVLSL-FATRLSRHFHEKTGKALPLLYISTFLIFGLP 233 S+PTL T ++ + S VLG ++ L FA R + K ++ +YI+ +I G P Sbjct: 8 SYPTLLKATIVTLQLTLTSLVLGSLIGLLFA--FFRISNNKVLNSIAHVYIA--IIRGTP 63 Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293 +V IA+ Y F +P F + IAL+ + A+I EI R + +V Sbjct: 64 LIVQIAILY-----------FGITSVVVFTP-FWAGAIALAIHNGAYITEIFRGSIQSVD 111 Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353 RGQ+EAA +LG+ + A R ++LPQA R +PPL +Q++ LK+SSL VG ++L G Sbjct: 112 RGQLEAARSLGMPYPLAMRRIILPQAFRLSLPPLGNQFIIGLKDSSLVAYVGMSELWGSG 171 Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 +I Q ++ +I YL L ++ F+N L ++ KE Sbjct: 172 LSIAAGNFQQLDTYIIVGAYYLVLVLLFTYFVNLLEKRLQRKE 214 Score = 37.0 bits (84), Expect = 4.9, Method: Compositional matrix adjust. Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 1/74 (1%) Query: 83 SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142 SSY T +L + T L + ++ ++IG L R+S NK++ I VY+ + R P + Sbjct: 7 SSYPT-LLKATIVTLQLTLTSLVLGSLIGLLFAFFRISNNKVLNSIAHVYIAIIRGTPLI 65 Query: 143 VVIFFLYKSVLSVL 156 V I LY + SV+ Sbjct: 66 VQIAILYFGITSVV 79 >gi|327534749|gb|AEA93583.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus faecalis OG1RF] Length = 237 Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 52/131 (39%), Positives = 76/131 (58%), Gaps = 7/131 (5%) Query: 271 IALSC---YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327 IA+ C Y A+I+E+VRSG+ AVPRGQ EAA + GLT+ + R V+LPQA R ++PPL Sbjct: 107 IAILCVGLYHGAYISEVVRSGIGAVPRGQFEAAYSQGLTYGQTMRYVILPQAWRIMLPPL 166 Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387 T+Q +NL+KN+S + AD++ + + I + F+Y L +A Sbjct: 167 TNQVVNLIKNTSTVAIISGADVMFAANSWSSVNLNYIPAFALAGFLYFILCFPLA----N 222 Query: 388 LNAKIALKEKK 398 L K+ K KK Sbjct: 223 LARKMEEKNKK 233 >gi|237798755|ref|ZP_04587216.1| amino acid ABC transporter permease [Pseudomonas syringae pv. oryzae str. 1_6] gi|331021608|gb|EGI01665.1| amino acid ABC transporter permease [Pseudomonas syringae pv. oryzae str. 1_6] Length = 221 Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 60/220 (27%), Positives = 107/220 (48%), Gaps = 23/220 (10%) Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPT 234 +T+ A V VLG L+L ++ G +++PLL + T+ +P Sbjct: 19 MTLKLMAMGVVGGLVLGTALALMRLSSNKLLANVAGAYVNYFRSIPLLLVITWFYLAVP- 77 Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294 L++ D P+ F S +A + AA+ EIVR+G+ ++ + Sbjct: 78 ---FVLRWITGEDTPI-------------GAFASCVVAFMMFEAAYFCEIVRAGVQSISK 121 Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354 GQM AA ALG+ + + RL++LPQA R + P L Q + L +++SL VG D ++ Sbjct: 122 GQMGAAQALGMNYSQMMRLIILPQAFRKMTPLLLQQSIILFQDTSLVYTVGLVDFLNASR 181 Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394 + + G+A E ++I +Y ++S ++ + RL + A+ Sbjct: 182 SSGDIIGRANEFLIIAGLVYFTISFAASVLVKRLQKRFAV 221 Score = 42.7 bits (99), Expect = 0.094, Method: Compositional matrix adjust. Identities = 27/65 (41%), Positives = 39/65 (60%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151 G V T L G++ ++GT + RLS+NKL+A + YV FR+IP L+VI + Y + Sbjct: 16 GMVMTLKLMAMGVVGGLVLGTALALMRLSSNKLLANVAGAYVNYFRSIPLLLVITWFYLA 75 Query: 152 VLSVL 156 V VL Sbjct: 76 VPFVL 80 >gi|225862620|ref|YP_002747998.1| amino acid ABC transporter, permease protein [Bacillus cereus 03BB102] gi|225789877|gb|ACO30094.1| amino acid ABC transporter, permease protein [Bacillus cereus 03BB102] Length = 214 Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 59/172 (34%), Positives = 93/172 (54%), Gaps = 37/172 (21%) Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247 KI V S VLGI++ + + LPLL I F F LP LK ++ Sbjct: 47 KIPVVSQVLGIIVEVI-------------RNLPLLLIIFFTYFALPEA---GLKLEI--- 87 Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307 ++ +AL+ + AA I+EIVRSGL+++ +GQ+EAA + GLT+ Sbjct: 88 ------------------ITAVIVALTIFEAAMISEIVRSGLLSIEKGQIEAARSSGLTY 129 Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359 +A ++LPQA+R ++PPL SQ+++LLK+++LAV + +L+ I Q Sbjct: 130 VQALWHIILPQALRRMVPPLVSQFISLLKDTALAVVISLPELMHNAQIISGQ 181 Score = 38.5 bits (88), Expect = 1.8, Method: Compositional matrix adjust. Identities = 21/61 (34%), Positives = 37/61 (60%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G + T +A ++ + IIG+++G R +V+ + + VEV RN+P L++IFF Sbjct: 15 LLKGLLITLEVALVAIVLSFIIGSVIGILRYMKIPVVSQVLGIIVEVIRNLPLLLIIFFT 74 Query: 149 Y 149 Y Sbjct: 75 Y 75 >gi|158319239|ref|YP_001511746.1| polar amino acid ABC transporter, inner membrane subunit [Alkaliphilus oremlandii OhILAs] gi|158139438|gb|ABW17750.1| polar amino acid ABC transporter, inner membrane subunit [Alkaliphilus oremlandii OhILAs] Length = 226 Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 61/191 (31%), Positives = 109/191 (57%), Gaps = 12/191 (6%) Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251 F+ LG+VL +F L R K + Y+ +I G P LV I + Y + P++ Sbjct: 26 FTVALGVVLGIFLA-LMRISKNKILNFIGTAYVE--IIRGTPLLVQIFIVY---YGLPMM 79 Query: 252 G----QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307 G +F+G + EF++ IALS + A++AEI+RSG+ +V +GQMEAA +LG+ + Sbjct: 80 GFKIPALSFLG--SAGEEFIAGIIALSINSGAYVAEIIRSGIQSVDKGQMEAARSLGMPY 137 Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367 A + +++PQA ++I+P L ++++ ++K SS+ +G +L+ T+ T +E + Sbjct: 138 PMAMKHIIIPQAFKNILPALGNEFIVVIKESSVMSVIGIHELMYNANTVRGNTFIPLEPL 197 Query: 368 LIWMFIYLSLS 378 ++ IY L+ Sbjct: 198 IVAAGIYFILT 208 Score = 41.2 bits (95), Expect = 0.30, Method: Compositional matrix adjust. Identities = 29/95 (30%), Positives = 44/95 (46%), Gaps = 6/95 (6%) Query: 84 SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143 Y ++G NT LAF + ++G + R+S NK++ +I YVE+ R P LV Sbjct: 8 KYYQFFIIGAKNTVLLAFFTVALGVVLGIFLALMRISKNKILNFIGTAYVEIIRGTPLLV 67 Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSF 178 IF +Y +P +P FL + G F Sbjct: 68 QIFIVYYG------LPMMGFKIPALSFLGSAGEEF 96 >gi|323127705|gb|ADX25002.1| Putative amino acid ABC transporter [Streptococcus dysgalactiae subsp. equisimilis ATCC 12394] Length = 228 Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 63/219 (28%), Positives = 123/219 (56%), Gaps = 20/219 (9%) Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY-ISTFL-IF-GLPTLVL 237 +T+ +A + F ++G++++L K + PL + ++T++ IF G P +V Sbjct: 19 VTIMISASVVFFGTIIGVLVTLI----------KRTQIKPLTWLVNTYVWIFRGTPMVVQ 68 Query: 238 IALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY---IALSCYTAAFIAEIVRSGLIAVPR 294 I + + + Q IG ++ +F L I +S + A+I+EIVR+G+ AVP+ Sbjct: 69 IMIAFAWMY----FNQMPTIGFGVLNLDFSRLLPGIIIISLNSGAYISEIVRAGIEAVPK 124 Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354 GQ+EAA +LG+ R A R V+LPQA ++I+P L ++++ ++K+S+L +G +L + Sbjct: 125 GQLEAAYSLGIRPRNAMRYVILPQAFKNILPALGNEFITIIKDSALLQTIGVMELWNGAQ 184 Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393 ++ T I +L+ F YL ++ +++ + L ++A Sbjct: 185 SVATATYSPIAPLLVAAFYYLMVTTVLSQLLAVLERRMA 223 >gi|323700540|ref|ZP_08112452.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio sp. ND132] gi|323460472|gb|EGB16337.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio desulfuricans ND132] Length = 292 Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 63/200 (31%), Positives = 113/200 (56%), Gaps = 10/200 (5%) Query: 189 IFVFSFVLGIVLSL-FAT-RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246 I V S ++G++L + FA RLS++ + LYI +L G P + + + + L Sbjct: 62 ITVCSMIVGLILGVVFAVMRLSKN---PVTRWFSGLYI--WLFRGTPVYLQLLIWFNLAL 116 Query: 247 DKPV--LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304 P+ LG + ++P F++ L A++ EIVRSG+++V +GQ++AA LG Sbjct: 117 IFPIVNLGFAEYRMVDVMTP-FVAALFGLGLNEGAYMTEIVRSGILSVDKGQVDAATTLG 175 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364 +T A R ++LPQAMR I+PP+ ++++ LLK SS+A A+ F +L+ I + + Sbjct: 176 MTRLTAMRRIVLPQAMRVIVPPVGNEFIGLLKTSSMASAIAFTELLHRAQLIYFVNAKVM 235 Query: 365 EIILIWMFIYLSLSIMIALF 384 E++++ YL + +++ F Sbjct: 236 ELLIVATGWYLIVVTLLSFF 255 >gi|322834313|ref|YP_004214340.1| polar amino acid ABC transporter inner membrane subunit [Rahnella sp. Y9602] gi|321169514|gb|ADW75213.1| polar amino acid ABC transporter, inner membrane subunit [Rahnella sp. Y9602] Length = 274 Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 48/128 (37%), Positives = 78/128 (60%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IALS A++AE +RSG+++VPRGQ EAA+ALG++ V PQA+R IIPP S Sbjct: 147 IALSMNYGAYLAETIRSGVLSVPRGQQEAALALGVSRWTVAVHVTAPQALRIIIPPAGSM 206 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++++LK+SSL +G +L + + T + +E++ IY +SI++ L +RL Sbjct: 207 FISMLKDSSLVSLMGLWELNFLAQSYGRSTYRYMEMLATAAAIYWIMSIVLELLQSRLER 266 Query: 391 KIALKEKK 398 + A ++ Sbjct: 267 RFAQGHRR 274 >gi|240850843|ref|YP_002972243.1| glutamate-aspartate ABC transporter permease component GltJ [Bartonella grahamii as4aup] gi|240267966|gb|ACS51554.1| glutamate-aspartate ABC transporter permease component GltJ [Bartonella grahamii as4aup] Length = 250 Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 48/114 (42%), Positives = 74/114 (64%), Gaps = 4/114 (3%) Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 AL +T+A IAE VRSG+ A+P GQ AA+A+G T ++ R ++LP+A+R+I+PPLTS+ Sbjct: 120 ALGFFTSARIAEQVRSGIEAIPSGQRYAAMAMGFTTYQSYRYIILPRAIRTIMPPLTSEA 179 Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 + ++KNSS+A AV +L+ I + E L+ +Y I+IALF+ Sbjct: 180 MGIVKNSSIAFAVSINELMQFQYQAIEEVSHVYENYLLVTILY----ILIALFV 229 Score = 40.8 bits (94), Expect = 0.40, Method: Compositional matrix adjust. Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 5/79 (6%) Query: 84 SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGR-LSANKLVAWICR----VYVEVFRN 138 +Y +L G NT L+ + +I A + G ++G R L ++ +I R ++VE+ RN Sbjct: 28 TYLDTLLDGLKNTVILSITSLILAVLCGVIIGTMRTLPKTSIINYIFRTIGAIWVEIMRN 87 Query: 139 IPPLVVIFFLYKSVLSVLP 157 IP LV +F Y V + P Sbjct: 88 IPLLVQVFLWYFVVPKIYP 106 >gi|167043000|gb|ABZ07713.1| putative binding-protein-dependent transport system inner membrane component [uncultured marine microorganism HF4000_ANIW137P11] Length = 684 Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 57/162 (35%), Positives = 88/162 (54%), Gaps = 9/162 (5%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHF-DKPVLG-QFNFIGGSTVSPEFMSLYIALS 274 + PL+ F+ FG+ + I Y+ +F D G + F G S F+S L Sbjct: 500 RNTPLIVQFMFIHFGVGIGLKIQKAYEGNFGDMGTDGLDYFFFGQSA----FISAIFTLG 555 Query: 275 CYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNL 334 + A+ E +R + A+P GQMEA ++GLT+ RLV+LPQA+R IPPL ++ +NL Sbjct: 556 LNSGAYQCETIRGAIAAIPTGQMEAGRSIGLTYMGTMRLVILPQAIRICIPPLGNEMVNL 615 Query: 335 LKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376 + NSSLA+ +G+++L G II T +I W + +S Sbjct: 616 VLNSSLAMVIGYSELARQGRLIIAVT---FQIFWAWGMVMIS 654 >gi|302337059|ref|YP_003802265.1| polar amino acid ABC transporter inner membrane protein [Spirochaeta smaragdinae DSM 11293] gi|301634244|gb|ADK79671.1| polar amino acid ABC transporter, inner membrane subunit [Spirochaeta smaragdinae DSM 11293] Length = 225 Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 46/135 (34%), Positives = 82/135 (60%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P F S IAL + A+IAEI R + ++ GQMEAA +LG+ RKA R ++LPQA + Sbjct: 89 PPFPSAIIALGVHNGAYIAEIFRGSIQSIHYGQMEAARSLGMPRRKAMRRIILPQAFKRA 148 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 +P L +Q++ LK+SSLA + +L+ G + + T +E+++I YL ++ ++ + Sbjct: 149 VPSLGNQFIIALKDSSLASTIAVPELLLKGRQLGSSTFMYMEMLIIVAIWYLIMTSVLTI 208 Query: 384 FMNRLNAKIALKEKK 398 ++RL ++ + ++ Sbjct: 209 GVHRLEKRLRVSDRD 223 >gi|296156267|ref|ZP_06839106.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. Ch1-1] gi|295893773|gb|EFG73552.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. Ch1-1] Length = 246 Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 41/85 (48%), Positives = 58/85 (68%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 E + ++ L+CY+ AFIAE R+G+ V Q +A ALG+T A R V+LPQA+R Sbjct: 110 ELFAGWLGLTCYSTAFIAEEFRAGIRGVGIAQYQAGAALGMTRYTALRHVILPQAVRIAT 169 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADL 349 PPL QY+N++KNSSL +A+G A+L Sbjct: 170 PPLAGQYMNIVKNSSLTMAIGVAEL 194 Score = 40.4 bits (93), Expect = 0.53, Method: Compositional matrix adjust. Identities = 26/78 (33%), Positives = 41/78 (52%) Query: 82 DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141 D Y + GF+ T L+ + AT++G + +++ + VA R+YV VFRN P Sbjct: 9 DPRYLGWLAHGFLITLILSACVSVCATLLGFGLAMAQIAQQRSVAAAARLYVLVFRNSPL 68 Query: 142 LVVIFFLYKSVLSVLPIP 159 LV + F Y ++LP P Sbjct: 69 LVQLLFWYFGAATLLPQP 86 >gi|220924347|ref|YP_002499649.1| polar amino acid ABC transporter inner membrane subunit [Methylobacterium nodulans ORS 2060] gi|219948954|gb|ACL59346.1| polar amino acid ABC transporter, inner membrane subunit [Methylobacterium nodulans ORS 2060] Length = 240 Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 47/133 (35%), Positives = 79/133 (59%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + + L +TA+ +AE VR+G+ ++PRGQ A ALGLT + R VLLP A R I+P Sbjct: 108 FYTAVVCLGFFTASRVAEQVRAGIQSLPRGQRMAGTALGLTTGQTYRYVLLPNAYRIILP 167 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PLTS++LN LKN+S+A+ +G +L + ++ + Q E +Y+ +++++ Sbjct: 168 PLTSEFLNNLKNTSVALTIGLLELTARARSMQEFSFQVFEAFTAATILYIIINLVVVTAA 227 Query: 386 NRLNAKIALKEKK 398 L K+A+ + Sbjct: 228 GFLERKVAIPGAR 240 Score = 42.4 bits (98), Expect = 0.14, Method: Compositional matrix adjust. Identities = 33/104 (31%), Positives = 49/104 (47%), Gaps = 12/104 (11%) Query: 83 SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142 +YA +L G V T A I A +G+++G R N+ YVEVFRNIP L Sbjct: 19 GTYADMLLSGLVWTIVTALCAWIIAFAVGSVIGVMRTLPNRAAQAFGNGYVEVFRNIPLL 78 Query: 143 VVIFFLYKSVLSVLP---------IPD---HSIVLPFGMFLNNR 174 V +F + + +LP +PD ++ V+ G F +R Sbjct: 79 VQMFLWFFVLPELLPQDWGTWLKQLPDAPFYTAVVCLGFFTASR 122 >gi|73540165|ref|YP_294685.1| amino acid ABC transporter permease [Ralstonia eutropha JMP134] gi|72117578|gb|AAZ59841.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Ralstonia eutropha JMP134] Length = 227 Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 45/127 (35%), Positives = 77/127 (60%) Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327 S IA S + AA+ +EI+R+G+ +V RGQM AA ALG+T+ + +LV+LPQA R+++P L Sbjct: 101 SALIAFSLFEAAYYSEIIRAGIQSVSRGQMFAAQALGMTYGQTMKLVILPQAFRNMVPLL 160 Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387 +Q + L +++SL AD + + G+ +E++L +Y + ++L + R Sbjct: 161 LTQGIILFQDTSLVYVSALADFFGQAYGVGERDGRIVEMLLFAGLVYFVICYSVSLMVKR 220 Query: 388 LNAKIAL 394 K+AL Sbjct: 221 YQKKVAL 227 >gi|283852826|ref|ZP_06370089.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio sp. FW1012B] gi|283571818|gb|EFC19815.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio sp. FW1012B] Length = 253 Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 52/144 (36%), Positives = 81/144 (56%), Gaps = 24/144 (16%) Query: 222 LYISTFLIFGLPTLVLIALKY-----QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 LY+ F G P LV I + Y +H D P + IG +T L+C+ Sbjct: 87 LYVGAFR--GTPLLVQILIFYFCIGVLVHVDSPYV-----IGTAT-----------LACF 128 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 + A+I+E+VR+G+ +V RGQ E A++ GLTHR+A V+ PQA R I+PP+T Q+++ +K Sbjct: 129 SGAYISEMVRAGVESVDRGQWETAVSSGLTHRQALFYVIFPQAARRIVPPVTGQFVSCIK 188 Query: 337 NSSLAVAVGFADLVSVGGTIINQT 360 +SSL + +L ++N T Sbjct: 189 DSSLLSVISVRELTK-AAEVVNAT 211 >gi|228989784|ref|ZP_04149764.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus pseudomycoides DSM 12442] gi|228769931|gb|EEM18514.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus pseudomycoides DSM 12442] Length = 214 Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 43/94 (45%), Positives = 69/94 (73%), Gaps = 3/94 (3%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +AL+ + AA I+EIVRSGL+++ +GQ+EAA A GL++ + ++LPQA+R ++PPL SQ Sbjct: 93 VALTIFEAAMISEIVRSGLLSIEKGQIEAARASGLSYTQTLWHIILPQALRRMVPPLVSQ 152 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364 +++LLK++SLAV + +L+ IIN GQ + Sbjct: 153 FISLLKDTSLAVVISLPELMH-NAQIIN--GQNV 183 Score = 40.0 bits (92), Expect = 0.67, Method: Compositional matrix adjust. Identities = 24/71 (33%), Positives = 41/71 (57%), Gaps = 2/71 (2%) Query: 79 YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138 YT D + +L G + T +A ++ + IIG++VG R + +V+ + VE+ RN Sbjct: 7 YTGD--HVLFLLKGLLVTLEIAVVAILLSFIIGSIVGTLRYAKIPVVSQLLAFIVEIIRN 64 Query: 139 IPPLVVIFFLY 149 +P L++IFF Y Sbjct: 65 LPLLLIIFFTY 75 >gi|116254867|ref|YP_770703.1| putative permease component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] gi|115259515|emb|CAK10653.1| putative permease component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] Length = 252 Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 53/167 (31%), Positives = 93/167 (55%), Gaps = 11/167 (6%) Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290 G+P L+LI Y F P+L G+ V P F+++ L Y +AF++E+VR+G++ Sbjct: 74 GVPLLMLILWSY---FLVPLLT------GADV-PSFVTMLTTLVVYQSAFLSEVVRAGIV 123 Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 A+ GQM+A ALG ++ A R ++LPQA+ ++IP + S +++ +K+++L + DL Sbjct: 124 ALGPGQMDAGRALGHSYIGAMRFIILPQALYNMIPSIISTFVSTIKDTTLGYVINVPDLT 183 Query: 351 SVGGTIINQ-TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 + NQ Q ++ LI +Y ++ + F NRL I + Sbjct: 184 FAASQVNNQLLTQPFQVFLILAIVYFAICWTLTYFANRLERSITRRR 230 >gi|261404397|ref|YP_003240638.1| polar amino acid ABC transporter inner membrane subunit [Paenibacillus sp. Y412MC10] gi|329929716|ref|ZP_08283402.1| putative glutamine ABC transporter, permease protein GlnP [Paenibacillus sp. HGF5] gi|261280860|gb|ACX62831.1| polar amino acid ABC transporter, inner membrane subunit [Paenibacillus sp. Y412MC10] gi|328935933|gb|EGG32392.1| putative glutamine ABC transporter, permease protein GlnP [Paenibacillus sp. HGF5] Length = 216 Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 46/129 (35%), Positives = 81/129 (62%), Gaps = 1/129 (0%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P F + + LS + A IAEIVRSGL++V +GQ+EAA A GL++ + R V+LP A+R + Sbjct: 86 PTFWAAVVGLSIFEGAMIAEIVRSGLVSVDKGQIEAARASGLSYMQTLRHVILPLALRRM 145 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT-GQAIEIILIWMFIYLSLSIMIA 382 PP+ SQ+++L+K++SLAV + +L+ + + I ++ +Y +L+ +++ Sbjct: 146 SPPMVSQFISLIKDTSLAVIISLPELMRNVQILSGSSYSYVIPALVFASLLYFTLNYLLS 205 Query: 383 LFMNRLNAK 391 + RL A+ Sbjct: 206 IIAKRLEAR 214 >gi|299821270|ref|ZP_07053158.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Listeria grayi DSM 20601] gi|299816935|gb|EFI84171.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Listeria grayi DSM 20601] Length = 240 Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 68/213 (31%), Positives = 116/213 (54%), Gaps = 26/213 (12%) Query: 191 VFSFVLGIVLSLFATRLSR-HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249 +F F+LG++L+L TR+ R + GK LYIS F G P +V + + + + P Sbjct: 35 IFGFILGLLLAL--TRIYRVPVLSQLGK----LYISFFR--GTPIMVQL---FIVFYGIP 83 Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCY---TAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306 + I S + P LY A++ Y +AA IAEIVR+G+ +V +GQ EAA ++GLT Sbjct: 84 AITALVGIDTSKMDP----LYAAIATYALSSAAGIAEIVRAGVNSVEKGQEEAAYSIGLT 139 Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 R+ ++LPQA+ +P + + LK++SLA ++G D+ G T+I+ + ++E+ Sbjct: 140 GRQTFLRIVLPQALLQAMPNFGNMIIGFLKDTSLAFSIGVMDMSGRGQTLISSSNHSLEV 199 Query: 367 ILIWMFIYLSLSIM-------IALFMNRLNAKI 392 + IY +I+ + FM R + ++ Sbjct: 200 YIALAVIYYLTAIVLEQGFKWVERFMKRDDTRV 232 >gi|75765094|ref|ZP_00744383.1| Glutamine transport system permease protein glnP [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|218895696|ref|YP_002444107.1| amino acid ABC transporter, permease protein [Bacillus cereus G9842] gi|228899327|ref|ZP_04063590.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus thuringiensis IBL 4222] gi|74487418|gb|EAO51345.1| Glutamine transport system permease protein glnP [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|218541097|gb|ACK93491.1| amino acid ABC transporter, permease protein [Bacillus cereus G9842] gi|228860358|gb|EEN04755.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus thuringiensis IBL 4222] Length = 214 Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 59/172 (34%), Positives = 93/172 (54%), Gaps = 37/172 (21%) Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247 KI V S VLGI++ + + LPLL I F F LP LK ++ Sbjct: 47 KIPVVSQVLGIIVEVI-------------RNLPLLLIIFFTYFALPEA---GLKLEI--- 87 Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307 ++ +AL+ + AA I+EIVRSGL+++ +GQ+EAA + GLT+ Sbjct: 88 ------------------ITAVIVALTIFEAAMISEIVRSGLLSIEKGQIEAARSSGLTY 129 Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359 +A ++LPQA+R ++PPL SQ+++LLK+++LAV + +L+ I Q Sbjct: 130 VQALWHIILPQALRRMVPPLVSQFISLLKDTALAVVISLPELMHNAQIISGQ 181 Score = 38.5 bits (88), Expect = 1.7, Method: Compositional matrix adjust. Identities = 21/61 (34%), Positives = 37/61 (60%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G + T +A ++ + IIG+++G R +V+ + + VEV RN+P L++IFF Sbjct: 15 LLKGLLITLEVALVAIVLSFIIGSVIGILRYMKIPVVSQVLGIIVEVIRNLPLLLIIFFT 74 Query: 149 Y 149 Y Sbjct: 75 Y 75 >gi|46204319|ref|ZP_00209357.1| COG0765: ABC-type amino acid transport system, permease component [Magnetospirillum magnetotacticum MS-1] Length = 240 Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 48/133 (36%), Positives = 79/133 (59%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + + L +TAA +AE VR+G+ ++PRGQ A ALGLT + R VLLP A R I+P Sbjct: 108 FYTAVLCLGFFTAARVAEQVRAGIRSLPRGQALAGTALGLTVAQTYRFVLLPHAYRIILP 167 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PLTS++LN LKN+S+A+ +G +L + + + Q E +YL++++++ Sbjct: 168 PLTSEFLNNLKNTSVALTIGLLELTARARAMQEFSFQVFEAFTAATLLYLAVNLVVVAGA 227 Query: 386 NRLNAKIALKEKK 398 L ++A+ + Sbjct: 228 TLLERRLAVPGGR 240 Score = 37.0 bits (84), Expect = 4.8, Method: Compositional matrix adjust. Identities = 30/106 (28%), Positives = 47/106 (44%), Gaps = 12/106 (11%) Query: 81 SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140 +YA +L G T A A +G+++G R ++ + YVE+FRN+P Sbjct: 17 GTGTYADMLLSGLAWTVLTALGSWAIAFGLGSVIGVMRTLPSRAANAVGAAYVELFRNVP 76 Query: 141 PLVVIFFLYKSVLSVLP---------IPD---HSIVLPFGMFLNNR 174 LV +F Y + +LP +PD ++ VL G F R Sbjct: 77 LLVQMFLWYFVLPELLPARIGAAVKQMPDAPFYTAVLCLGFFTAAR 122 >gi|297517323|ref|ZP_06935709.1| glutamate/aspartate transport system permease GltJ [Escherichia coli OP50] Length = 195 Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 40/84 (47%), Positives = 60/84 (71%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+S + L +TAA + E VR+ + ++PRGQ AA+A+GLT +A R VLLP A R I+P Sbjct: 111 FLSSMLCLGLFTAARVCEQVRAAIQSLPRGQKNAALAMGLTLPQAYRYVLLPNAYRVIVP 170 Query: 326 PLTSQYLNLLKNSSLAVAVGFADL 349 P+TS+ +NL+KNS++A +G D+ Sbjct: 171 PMTSEMMNLVKNSAIASTIGLVDM 194 Score = 40.4 bits (93), Expect = 0.56, Method: Compositional matrix adjust. Identities = 24/77 (31%), Positives = 41/77 (53%) Query: 81 SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140 +++Y I GF T L+ I A ++G+ G R N+ ++ + +YVE+FRN+P Sbjct: 17 GNTTYLGWIWSGFQVTIALSICAWIIAFLVGSFFGILRTVPNRFLSGLGTLYVELFRNVP 76 Query: 141 PLVVIFFLYKSVLSVLP 157 +V F Y + +LP Sbjct: 77 LIVQFFTWYLVIPELLP 93 >gi|310766981|gb|ADP11931.1| Glutamate/aspartate transport system permease [Erwinia sp. Ejp617] Length = 225 Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 44/127 (34%), Positives = 78/127 (61%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 +S +A S + AA+ +EI+R+G++++ RGQ AA+ALG+T ++ +L++LPQA R++I Sbjct: 96 RLISAMVAFSLFEAAYYSEIIRAGILSIARGQGNAALALGMTQWQSMQLIVLPQAFRAMI 155 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 P L +Q + L +++SL + AD TI G IE++L +Y +S+ +L Sbjct: 156 PLLLTQGIVLFQDTSLVYVLSLADFFRTADTIGVNNGTEIEMVLFAGAVYFVISLSASLL 215 Query: 385 MNRLNAK 391 ++ L K Sbjct: 216 VSYLKKK 222 Score = 44.3 bits (103), Expect = 0.031, Method: Compositional matrix adjust. Identities = 25/76 (32%), Positives = 43/76 (56%), Gaps = 7/76 (9%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY-- 149 G V T + F+ ++ I GTL+ RLS+ K V+W ++YV +FR++P ++V+ + Y Sbjct: 19 GMVITLKITFTAIVFGIIWGTLLAVMRLSSFKPVSWFAKIYVNLFRSVPLVMVLLWFYLV 78 Query: 150 -----KSVLSVLPIPD 160 + VL + P D Sbjct: 79 VPGFLQQVLGLSPKTD 94 >gi|75759592|ref|ZP_00739679.1| Cystine transport system permease protein [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|74492927|gb|EAO56056.1| Cystine transport system permease protein [Bacillus thuringiensis serovar israelensis ATCC 35646] Length = 251 Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 74/223 (33%), Positives = 117/223 (52%), Gaps = 19/223 (8%) Query: 177 SFPTLTMDT--NAKIFVFSFVLGIVLSL-FATRLSRHFHEKTGKALPLLYISTFLIFGLP 233 S+PTL T ++ + S VLG ++ L FA R + K ++ +YI+ +I G P Sbjct: 29 SYPTLLKATIVTLQLTLTSLVLGSLIGLLFA--FFRISNNKVLNSIAHVYIA--IIRGTP 84 Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293 +V IA+ Y F +P F + IAL+ + A+I EI R + +V Sbjct: 85 LIVQIAILY-----------FGITSVVVFTP-FWAGAIALAIHNGAYITEIFRGSIQSVD 132 Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353 RGQ+EAA +LG+ + A R ++LPQA R +PPL +Q++ LK+SSL VG ++L G Sbjct: 133 RGQLEAARSLGMPYPLAMRRIILPQAFRLSLPPLGNQFIIGLKDSSLVAYVGMSELWGSG 192 Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 +I Q ++ +I YL L ++ F+N L ++ KE Sbjct: 193 LSIAAGNFQQLDTYIIVGAYYLVLVLLFTYFVNLLEKRLQRKE 235 Score = 37.0 bits (84), Expect = 4.9, Method: Compositional matrix adjust. Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 1/74 (1%) Query: 83 SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142 SSY T +L + T L + ++ ++IG L R+S NK++ I VY+ + R P + Sbjct: 28 SSYPT-LLKATIVTLQLTLTSLVLGSLIGLLFAFFRISNNKVLNSIAHVYIAIIRGTPLI 86 Query: 143 VVIFFLYKSVLSVL 156 V I LY + SV+ Sbjct: 87 VQIAILYFGITSVV 100 >gi|94309346|ref|YP_582556.1| amino acid ABC transporter permease [Cupriavidus metallidurans CH34] gi|93353198|gb|ABF07287.1| glutamate and aspartate transporter subunit ; membrane component of ABC superfamily [Cupriavidus metallidurans CH34] Length = 227 Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 68/214 (31%), Positives = 111/214 (51%), Gaps = 10/214 (4%) Query: 183 MDTNAKIFVFSFVLGIVLS--LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240 M +AKI V + ++GIV L RLS + K L +F LV++ L Sbjct: 22 MLVSAKITVTAVIVGIVWGTILAMMRLS------SNKLLNWFAQGYVTLFRSIPLVMVLL 75 Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300 + L + + FN S + S IA S + AA+ +EI+R+G+ +V RGQM AA Sbjct: 76 WFFLIIPQLLQKTFNLSAASDL--RMTSALIAFSLFEAAYYSEIIRAGIQSVSRGQMFAA 133 Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 A+G+T+ ++ RLV+LPQA R+++P L +Q + L +++SL AD I + Sbjct: 134 QAMGMTYGQSMRLVILPQAFRNMVPLLLTQGIILFQDTSLVYVSALADFFGQAYGIGERD 193 Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394 G+ +E++L IY + +L + R K+A+ Sbjct: 194 GRIVEMLLFAGLIYFIICFSASLLVKRYQKKVAV 227 Score = 39.3 bits (90), Expect = 0.97, Method: Compositional matrix adjust. Identities = 17/48 (35%), Positives = 32/48 (66%) Query: 102 SGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 + +I + GT++ RLS+NKL+ W + YV +FR+IP ++V+ + + Sbjct: 31 TAVIVGIVWGTILAMMRLSSNKLLNWFAQGYVTLFRSIPLVMVLLWFF 78 >gi|311069228|ref|YP_003974151.1| glutamine ABC transporter permease [Bacillus atrophaeus 1942] gi|310869745|gb|ADP33220.1| glutamine ABC transporter (permease) [Bacillus atrophaeus 1942] Length = 218 Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 56/181 (30%), Positives = 100/181 (55%), Gaps = 27/181 (14%) Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273 +T + LPLL I F F LP I +K + I + ++ AL Sbjct: 60 ETIRNLPLLLIIFFTYFALPE---IGIKLE-------------ITAAAIT--------AL 95 Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333 + + +A ++EI+RSGL +V +GQ EAA + GL++ + L+++PQA+R ++PP+ SQ+++ Sbjct: 96 TIFESAMLSEIIRSGLKSVEKGQTEAARSSGLSYVQTLFLIIMPQALRRMVPPIVSQFIS 155 Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQA---IEIILIWMFIYLSLSIMIALFMNRLNA 390 LLK++SLAV + +L+ I Q+ + I L+ F+Y +++ ++L +L Sbjct: 156 LLKDTSLAVVIALPELIHNAQIINGQSADSSYFFPIFLLAAFMYFAVNYSLSLAARKLEL 215 Query: 391 K 391 K Sbjct: 216 K 216 Score = 45.1 bits (105), Expect = 0.023, Method: Compositional matrix adjust. Identities = 27/74 (36%), Positives = 45/74 (60%), Gaps = 2/74 (2%) Query: 76 IVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEV 135 I Y+SD + T +L GF+ T ++AF ++ + + G ++G R + +V+ I V VE Sbjct: 4 IEAYSSD--HLTFLLDGFLVTLYVAFISIVLSFMFGGVIGTLRYANIPIVSNILAVAVET 61 Query: 136 FRNIPPLVVIFFLY 149 RN+P L++IFF Y Sbjct: 62 IRNLPLLLIIFFTY 75 >gi|81428667|ref|YP_395667.1| amino acid ABC transporter permease/substrate-binding protein [Lactobacillus sakei subsp. sakei 23K] gi|78610309|emb|CAI55358.1| Putative amino acid ABC transporter, substrate binding/permease subunit [Lactobacillus sakei subsp. sakei 23K] Length = 487 Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 43/129 (33%), Positives = 79/129 (61%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P + IA+S +AA++AEI+RSG+ A+ GQ EA+ +LGL+ R ++LPQA+++I Sbjct: 356 PALFAGVIAVSLNSAAYVAEIIRSGINAIDAGQTEASRSLGLSQHDTMRYIILPQALKNI 415 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 P L +++++L+K SS+ +G DL+ + + T + + I + M IY L+ ++ Sbjct: 416 WPALGNEFISLIKESSIVSIIGVTDLIYQLKVVQSATYKGVAPIFVAMVIYFILTFSLSK 475 Query: 384 FMNRLNAKI 392 +N + K+ Sbjct: 476 LLNHIERKM 484 >gi|228937645|ref|ZP_04100282.1| Amino acid ABC transproter, permease [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228977104|ref|ZP_04137505.1| Amino acid ABC transproter, permease [Bacillus thuringiensis Bt407] gi|228782552|gb|EEM30729.1| Amino acid ABC transproter, permease [Bacillus thuringiensis Bt407] gi|228822019|gb|EEM68010.1| Amino acid ABC transproter, permease [Bacillus thuringiensis serovar berliner ATCC 10792] Length = 251 Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 74/223 (33%), Positives = 117/223 (52%), Gaps = 19/223 (8%) Query: 177 SFPTLTMDT--NAKIFVFSFVLGIVLSL-FATRLSRHFHEKTGKALPLLYISTFLIFGLP 233 S+PTL T ++ + S VLG ++ L FA R + K ++ +YI+ +I G P Sbjct: 29 SYPTLLKATIVTLQLTLTSLVLGSLIGLLFA--FFRISNNKVLNSIAHVYIA--IIRGTP 84 Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293 +V IA+ Y F +P F + IAL+ + A+I EI R + +V Sbjct: 85 LIVQIAILY-----------FGITSVVVFTP-FWAGAIALAIHNGAYITEIFRGSIQSVD 132 Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353 RGQ+EAA +LG+ + A R ++LPQA R +PPL +Q++ LK+SSL VG ++L G Sbjct: 133 RGQLEAARSLGMPYPLAMRRIILPQAFRLSLPPLGNQFIIGLKDSSLVAYVGMSELWGSG 192 Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 +I Q ++ +I YL L ++ F+N L ++ KE Sbjct: 193 LSIAAGNFQQLDTYIIVGAYYLVLVLLFTYFVNLLEKRLQRKE 235 Score = 37.0 bits (84), Expect = 5.0, Method: Compositional matrix adjust. Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 1/74 (1%) Query: 83 SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142 SSY T +L + T L + ++ ++IG L R+S NK++ I VY+ + R P + Sbjct: 28 SSYPT-LLKATIVTLQLTLTSLVLGSLIGLLFAFFRISNNKVLNSIAHVYIAIIRGTPLI 86 Query: 143 VVIFFLYKSVLSVL 156 V I LY + SV+ Sbjct: 87 VQIAILYFGITSVV 100 >gi|163941155|ref|YP_001646039.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus weihenstephanensis KBAB4] gi|229012723|ref|ZP_04169893.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus mycoides DSM 2048] gi|229061107|ref|ZP_04198458.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus AH603] gi|163863352|gb|ABY44411.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus weihenstephanensis KBAB4] gi|228718190|gb|EEL69828.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus AH603] gi|228748558|gb|EEL98413.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus mycoides DSM 2048] Length = 222 Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 68/228 (29%), Positives = 115/228 (50%), Gaps = 33/228 (14%) Query: 177 SFPTL------TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230 SFP L T+ + SF +GI L++ ++ + + +YIS F Sbjct: 11 SFPQLFKYVYITLGITVVSMIISFFIGIGLAIITKNKTKFLYP-----IARVYISFFR-- 63 Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL------YIALSCYTAAFIAEI 284 G P LV + + L+F P +SP F L I LS AA+++EI Sbjct: 64 GTPLLVQL---FVLYFGLP-----------QISPAFTVLTAMQATLIGLSLNNAAYLSEI 109 Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344 +R L AV GQM+A +++G+T +A R ++ PQA+R +P L + ++ LLK SSL+ A+ Sbjct: 110 IRGSLNAVESGQMDACLSVGMTKAQAMRQIIFPQAIRVAVPSLGNNFVGLLKESSLSFAL 169 Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 G A++++ + Q+ + +E L +Y ++I+I+ RL K+ Sbjct: 170 GVAEILAQAKMLAAQSYRYMESYLAVAIVYWIITIVISWGQKRLEKKL 217 >gi|150389058|ref|YP_001319107.1| polar amino acid ABC transporter, inner membrane subunit [Alkaliphilus metalliredigens QYMF] gi|149948920|gb|ABR47448.1| polar amino acid ABC transporter, inner membrane subunit [Alkaliphilus metalliredigens QYMF] Length = 227 Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 58/207 (28%), Positives = 102/207 (49%), Gaps = 26/207 (12%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPTLVLIALKYQL 244 VF F++G+ ++ R + T + +PLL FG+P + + Sbjct: 34 VFGFMIGLTVAFIRIYKVRGLYPLTSIYLSAIRGVPLLIQIFIFYFGVPQI----FPQTI 89 Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304 HF P FMS IA S + A+++E +R+ ++++ +GQ EAA+++G Sbjct: 90 HFLTP----------------FMSACIAFSINSGAYMSETIRAAILSIDKGQKEAALSVG 133 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364 +T KA + ++LPQA IP L + +NLLK +SLA +G ADL+ + + + Sbjct: 134 MTEFKAMKNIVLPQAAVVAIPSLGNTIINLLKETSLAFTIGIADLLGRAKMLSASNYRYL 193 Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAK 391 E + IY ++I+I +N+L + Sbjct: 194 ETFVATGLIYWGITILITYVLNKLEKR 220 >gi|322833421|ref|YP_004213448.1| polar amino acid ABC transporter inner membrane subunit [Rahnella sp. Y9602] gi|321168622|gb|ADW74321.1| polar amino acid ABC transporter, inner membrane subunit [Rahnella sp. Y9602] Length = 249 Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 63/212 (29%), Positives = 107/212 (50%), Gaps = 17/212 (8%) Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTF---------LIFGLPTLVLIALKYQLHFD 247 GI+ +L + L+ F G L L +S F ++GL + L+ + + +F Sbjct: 27 GILCTLLISLLAVLFALPVGILLGLARLSPFRWLSWPAACWVYGLRGIPLLMVVFWTYFC 86 Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307 P+L N G F ++ L Y +A+IAEIVR G+ A+P GQ EAA ALG+++ Sbjct: 87 VPLLIGHNISG-------FSTMLCTLVIYESAYIAEIVRGGIQALPGGQYEAARALGMSY 139 Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ-TGQAIEI 366 K RL++LPQA+ + +P L SQ ++++K+S+L + +L + NQ + ++ Sbjct: 140 FKTLRLIILPQALYNTLPSLVSQLVSIIKDSTLGYVINVPELTFAANQVNNQLLTKPFQV 199 Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 I Y + + N+L A+I K + Sbjct: 200 FAIVAIGYYIICFSLTWLANKLEARITRKRQN 231 >gi|228970534|ref|ZP_04131184.1| Amino acid ABC transproter, permease [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228789121|gb|EEM37050.1| Amino acid ABC transproter, permease [Bacillus thuringiensis serovar thuringiensis str. T01001] Length = 230 Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 74/223 (33%), Positives = 117/223 (52%), Gaps = 19/223 (8%) Query: 177 SFPTLTMDT--NAKIFVFSFVLGIVLSL-FATRLSRHFHEKTGKALPLLYISTFLIFGLP 233 S+PTL T ++ + S VLG ++ L FA R + K ++ +YI+ +I G P Sbjct: 8 SYPTLLKATIVTLQLTLTSLVLGSLIGLLFA--FFRISNNKVLNSIAHVYIA--IIRGTP 63 Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293 +V IA+ Y F +P F + IAL+ + A+I EI R + +V Sbjct: 64 LIVQIAILY-----------FGITSVVVFTP-FWAGAIALAIHNGAYITEIFRGSIQSVD 111 Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353 RGQ+EAA +LG+ + A R ++LPQA R +PPL +Q++ LK+SSL VG ++L G Sbjct: 112 RGQLEAARSLGMPYPLAMRRIILPQAFRLSLPPLGNQFIIGLKDSSLVAYVGMSELWGSG 171 Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 +I Q ++ +I YL L ++ F+N L ++ KE Sbjct: 172 LSIAAGNFQQLDTYIIVGAYYLVLVLLFTYFVNLLEKRLQRKE 214 Score = 37.0 bits (84), Expect = 5.3, Method: Compositional matrix adjust. Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 1/74 (1%) Query: 83 SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142 SSY T +L + T L + ++ ++IG L R+S NK++ I VY+ + R P + Sbjct: 7 SSYPT-LLKATIVTLQLTLTSLVLGSLIGLLFAFFRISNNKVLNSIAHVYIAIIRGTPLI 65 Query: 143 VVIFFLYKSVLSVL 156 V I LY + SV+ Sbjct: 66 VQIAILYFGITSVV 79 >gi|317405101|gb|EFV85447.1| amino acids ABC transporter [Achromobacter xylosoxidans C54] Length = 229 Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 61/178 (34%), Positives = 93/178 (52%), Gaps = 14/178 (7%) Query: 233 PTLVLIALKYQLHFDKPVLGQ--FNFIGGSTVSPEFMSLY------------IALSCYTA 278 P L+ + H + P+L Q F + G + PE ++ IAL+ +A Sbjct: 47 PCRWLVDAYVEYHRNVPLLVQVLFWYFGMPELLPEGFRMWLYQHNAEMSLAAIALALGSA 106 Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338 A+IAE +RSGL A+P Q EAA ALG ++ + R V++PQA+R IPPL + L L KN+ Sbjct: 107 AYIAEDIRSGLRAIPGTQFEAARALGASYLQCMRFVIVPQAVRISIPPLVGRALLLFKNT 166 Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 S+A+A+G +L I N+T + +YL S +I L +R+ A+ L Sbjct: 167 SVAMAIGVMELTYQAREIENETYRTFATFGAATLMYLLGSFLIMLIGSRIYARYRLNR 224 >gi|319791543|ref|YP_004153183.1| polar amino acid ABC transporter, inner membrane subunit [Variovorax paradoxus EPS] gi|315594006|gb|ADU35072.1| polar amino acid ABC transporter, inner membrane subunit [Variovorax paradoxus EPS] Length = 229 Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 47/136 (34%), Positives = 82/136 (60%), Gaps = 1/136 (0%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 GS E +S I + AA+ +EI+R+G+ ++PRGQ+ A A+G+T+ + RLV+LPQ Sbjct: 93 GSNYRSE-ISAVITFVAFEAAYFSEIMRAGIQSIPRGQVNAGQAVGMTYGQNMRLVVLPQ 151 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378 A R+++P L +Q + L +++SL A+G D++ T G+ IE L+ +Y + Sbjct: 152 AFRNMLPVLLTQTIILFQDTSLVYAIGAYDMLKGFETAGKNFGRPIEAYLLAAVVYFVMC 211 Query: 379 IMIALFMNRLNAKIAL 394 ++ + RL+ KIA+ Sbjct: 212 YALSWLVKRLHKKIAI 227 >gi|270293060|ref|ZP_06199271.1| amino acid ABC transporter, permease protein [Streptococcus sp. M143] gi|270279039|gb|EFA24885.1| amino acid ABC transporter, permease protein [Streptococcus sp. M143] Length = 227 Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 60/211 (28%), Positives = 114/211 (54%), Gaps = 17/211 (8%) Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF---GLPTLVLIALKYQL-HFD 247 F +LG++L+ FA R + PL++ + ++ G P +V I + + L H D Sbjct: 30 FGTILGVLLA-FAQR---------SRFKPLVWFANVYVWIFRGTPMMVQIMIAFALMHID 79 Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307 P + Q +G + + +S + A+++E VR+G+ AVP+GQ+EAA +LG+ Sbjct: 80 APTI-QVGILGVDL--SRLIPGILIISMNSGAYVSETVRAGINAVPKGQLEAAYSLGIRP 136 Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367 + A R V+LPQA+++I+P L ++++ ++K+SSL +G +L + T+ T + + Sbjct: 137 KNAMRYVILPQAIKNILPALGNEFITIIKDSSLLSTIGVMELWNGATTVATTTYLPLTPL 196 Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 L F YL ++ ++ + + I +KK Sbjct: 197 LFAAFYYLIMTSVLTVALKAFENYIGQGDKK 227 >gi|168184995|ref|ZP_02619659.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Clostridium botulinum Bf] gi|182671932|gb|EDT83893.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Clostridium botulinum Bf] Length = 228 Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 50/182 (27%), Positives = 103/182 (56%), Gaps = 14/182 (7%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 + P+L + +GLPT I +++ + P+LG NF P+F + +ALS Sbjct: 61 RGTPVLVQLYIIYYGLPT---IGIRFP---EVPILGS-NF-------PDFFAGILALSIN 106 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 + A++AEI+R+G+ AV +GQMEAA +LG++ A + V++PQA ++I+P L ++++ ++K Sbjct: 107 SGAYVAEIIRAGIQAVDKGQMEAARSLGMSESMAMKNVIIPQAFKNILPALGNEFITIIK 166 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 SS+ +G +L+ T+ + E +L+ +Y ++ ++ + ++ + + Sbjct: 167 ESSIVSIIGIHELMYNADTVRGNIFRPFEPLLVAAVMYFIMTFTLSKLLGVAERRMRVSD 226 Query: 397 KK 398 + Sbjct: 227 RN 228 >gi|148992490|ref|ZP_01822185.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP9-BS68] gi|168484481|ref|ZP_02709433.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae CDC1873-00] gi|168485772|ref|ZP_02710280.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae CDC1087-00] gi|168489799|ref|ZP_02713998.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP195] gi|225856490|ref|YP_002738001.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae P1031] gi|147928807|gb|EDK79820.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP9-BS68] gi|172042312|gb|EDT50358.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae CDC1873-00] gi|183571006|gb|EDT91534.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae CDC1087-00] gi|183571820|gb|EDT92348.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP195] gi|225725161|gb|ACO21013.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae P1031] Length = 227 Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 61/210 (29%), Positives = 116/210 (55%), Gaps = 21/210 (10%) Query: 195 VLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF---GLPTLVLIALKYQL-HFDKPV 250 +LG+VL+ F R K PL++++ ++ G P +V I + + L H + P Sbjct: 33 ILGVVLA-FGQR---------SKFKPLVWLANLYVWIFRGTPMMVQIMIAFALMHINAPT 82 Query: 251 LGQFNFIGG--STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308 + Q +G S + P + +S + A+++E VR+G+ AVP+GQ+EAA +LG+ + Sbjct: 83 I-QIGILGVDFSRLIPGIL----IISMNSGAYVSETVRAGINAVPKGQLEAAYSLGIRPK 137 Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368 A R V+LPQA+++I+P L ++++ ++K+SSL A+G +L + T+ T + +L Sbjct: 138 NAMRYVILPQAIKNILPALGNEFITIIKDSSLLSAIGVMELWNGATTVSTTTYLPLTPLL 197 Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 F YL ++ ++ + + + +KK Sbjct: 198 FAAFYYLIMTSILTVALKAFEKHMGQGDKK 227 >gi|320154861|ref|YP_004187240.1| putative amino acid ABC transporter permease [Vibrio vulnificus MO6-24/O] gi|319930173|gb|ADV85037.1| putative amino acid ABC transporter permease protein [Vibrio vulnificus MO6-24/O] Length = 238 Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 57/183 (31%), Positives = 100/183 (54%), Gaps = 31/183 (16%) Query: 191 VFSFVLGIVLSLFA-------TRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243 +F+ LG++++L A RL+R + E +A+P+L + ++ +GLPTL+ ++L + Sbjct: 49 LFAMTLGLMVALPALSPRKSLQRLNRIYVEVI-RAIPVLVLLLWVYYGLPTLLDVSLDH- 106 Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 + + IAL+ +AF+AE+ R G+ ++ RGQ EAA +L Sbjct: 107 ----------------------YWAGIIALTIAESAFMAEVFRGGIQSIGRGQHEAAKSL 144 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363 GL + + RLV+LPQA R ++P L +Q++ +LK SSL +G +DL ++ Sbjct: 145 GLNYWQKMRLVILPQAFRQMLPALGNQFVYILKMSSLVSVIGLSDLTRRANELVVNEYLP 204 Query: 364 IEI 366 +EI Sbjct: 205 LEI 207 Score = 40.8 bits (94), Expect = 0.40, Method: Compositional matrix adjust. Identities = 24/74 (32%), Positives = 43/74 (58%), Gaps = 1/74 (1%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 ++ GF +T ++ M+ A +G +V LS K + + R+YVEV R IP LV++ ++ Sbjct: 33 LIAGFADTISVSLLSMLFAMTLGLMVALPALSPRKSLQRLNRIYVEVIRAIPVLVLLLWV 92 Query: 149 YKSVLSVLPIP-DH 161 Y + ++L + DH Sbjct: 93 YYGLPTLLDVSLDH 106 >gi|320160626|ref|YP_004173850.1| amino acid ABC transporter permease protein [Anaerolinea thermophila UNI-1] gi|319994479|dbj|BAJ63250.1| amino acid ABC transporter permease protein [Anaerolinea thermophila UNI-1] Length = 291 Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 69/234 (29%), Positives = 124/234 (52%), Gaps = 23/234 (9%) Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLI-- 238 +T+ T FV S V+G++ L R++R+ + L LY+ ++ G+P LVLI Sbjct: 65 VTITTTLTAFVISLVIGLMAGL--GRIARNVFFRN---LSTLYVE--IVRGIPMLVLIFF 117 Query: 239 -------ALKYQLHFDKPVLGQ--FNFIGGSTV-----SPEFMSLYIALSCYTAAFIAEI 284 A+ L+ VL + + GG T P + IALS AF AE+ Sbjct: 118 IAFVAVPAVTSALNALGRVLVEAGLTWAGGLTQLENSGVPMQIRAIIALSVTYGAFSAEV 177 Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344 R+G+ ++P+GQMEAA + G+T+ +A R V+LPQA+R+++P L + ++++LK+SSL + Sbjct: 178 FRAGIQSIPKGQMEAARSQGMTYWQAMRYVILPQAIRNVLPALGNDFVSMLKDSSLVSVL 237 Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 D+ V QT + E +YL ++++++L + + ++ + + Sbjct: 238 AVRDITQVARLYAGQTFRYPEAFTTLAVLYLIMTLVLSLGVKAIERGLSHGQHR 291 Score = 36.6 bits (83), Expect = 6.4, Method: Compositional matrix adjust. Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 3/71 (4%) Query: 81 SDSSYATA---ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137 S SY A I G T + + + +IG + G GR++ N + +YVE+ R Sbjct: 48 SQPSYNQAFVFIQAGIHVTITTTLTAFVISLVIGLMAGLGRIARNVFFRNLSTLYVEIVR 107 Query: 138 NIPPLVVIFFL 148 IP LV+IFF+ Sbjct: 108 GIPMLVLIFFI 118 >gi|270284367|ref|ZP_05965993.2| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Bifidobacterium gallicum DSM 20093] gi|270276731|gb|EFA22585.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Bifidobacterium gallicum DSM 20093] Length = 322 Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 52/138 (37%), Positives = 82/138 (59%), Gaps = 1/138 (0%) Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312 +F + TV F + +I L+ AA+++EIVR+GL AV GQ EAA ALG+ + R Sbjct: 140 EFWSVDSKTVITAFNAAWIGLALNEAAYLSEIVRAGLEAVDPGQTEAAQALGMKRAQIMR 199 Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA-DLVSVGGTIINQTGQAIEIILIWM 371 V+LPQAMR IIPP ++ + +LK +SL +AV F +L I N+ + I ++L+ Sbjct: 200 RVVLPQAMRIIIPPTGNETIGMLKTTSLVLAVPFTLELQFATNAIANRIYKPIPLLLVAA 259 Query: 372 FIYLSLSIMIALFMNRLN 389 YL ++ ++ + +RL Sbjct: 260 IWYLFITSIMMVLQSRLE 277 >gi|111657768|ref|ZP_01408489.1| hypothetical protein SpneT_02001056 [Streptococcus pneumoniae TIGR4] gi|148990332|ref|ZP_01821518.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP6-BS73] gi|148997101|ref|ZP_01824755.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP11-BS70] gi|149010549|ref|ZP_01831920.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP19-BS75] gi|168490915|ref|ZP_02715058.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae CDC0288-04] gi|168492978|ref|ZP_02717121.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae CDC3059-06] gi|168575482|ref|ZP_02721418.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae MLV-016] gi|169833263|ref|YP_001694278.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae Hungary19A-6] gi|194396808|ref|YP_002037460.1| amino acid ABC transporter permease [Streptococcus pneumoniae G54] gi|225858625|ref|YP_002740135.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae 70585] gi|237650814|ref|ZP_04525066.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae CCRI 1974] gi|237821580|ref|ZP_04597425.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae CCRI 1974M2] gi|303260286|ref|ZP_07346257.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP-BS293] gi|303261492|ref|ZP_07347440.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP14-BS292] gi|303264160|ref|ZP_07350081.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae BS397] gi|303267026|ref|ZP_07352898.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae BS457] gi|303269212|ref|ZP_07354989.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae BS458] gi|307067421|ref|YP_003876387.1| amino acid ABC transporter permease [Streptococcus pneumoniae AP200] gi|147756801|gb|EDK63841.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP11-BS70] gi|147765030|gb|EDK71959.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP19-BS75] gi|147924361|gb|EDK75452.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP6-BS73] gi|168995765|gb|ACA36377.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae Hungary19A-6] gi|183574731|gb|EDT95259.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae CDC0288-04] gi|183577004|gb|EDT97532.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae CDC3059-06] gi|183578509|gb|EDT99037.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae MLV-016] gi|194356475|gb|ACF54923.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae G54] gi|225721724|gb|ACO17578.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae 70585] gi|301801656|emb|CBW34356.1| putative amino acid ABC transporter permease protein [Streptococcus pneumoniae INV200] gi|302637626|gb|EFL68113.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP14-BS292] gi|302638610|gb|EFL69074.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP-BS293] gi|302641276|gb|EFL71646.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae BS458] gi|302643420|gb|EFL73695.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae BS457] gi|302646565|gb|EFL76791.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae BS397] gi|306408958|gb|ADM84385.1| ABC-type amino acid transport system, permease component [Streptococcus pneumoniae AP200] gi|327390176|gb|EGE88519.1| amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Streptococcus pneumoniae GA04375] gi|332077236|gb|EGI87698.1| amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Streptococcus pneumoniae GA17545] Length = 227 Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 61/210 (29%), Positives = 116/210 (55%), Gaps = 21/210 (10%) Query: 195 VLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF---GLPTLVLIALKYQL-HFDKPV 250 +LG+VL+ F R K PL++++ ++ G P +V I + + L H + P Sbjct: 33 ILGVVLA-FGQR---------SKFKPLVWLANLYVWIFRGTPMMVQIMIAFALMHINAPT 82 Query: 251 LGQFNFIGG--STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308 + Q +G S + P + +S + A+++E VR+G+ AVP+GQ+EAA +LG+ + Sbjct: 83 I-QIGILGVDFSRLIPGIL----IISMNSGAYVSETVRAGINAVPKGQLEAAYSLGIRPK 137 Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368 A R V+LPQA+++I+P L ++++ ++K+SSL A+G +L + T+ T + +L Sbjct: 138 NAMRYVILPQAVKNILPALGNEFITIIKDSSLLSAIGVMELWNGATTVSTTTYLPLTPLL 197 Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 F YL ++ ++ + + + +KK Sbjct: 198 FAAFYYLIMTSILTVALKAFEKHMGQGDKK 227 >gi|324997391|ref|ZP_08118503.1| amino acid ABC transporter membrane protein [Pseudonocardia sp. P1] Length = 215 Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 50/131 (38%), Positives = 85/131 (64%), Gaps = 6/131 (4%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P F I L+ YTAAF+ E+VRSG+ VP GQ EAA ALG T + V+LPQA+R++ Sbjct: 83 PFFALACIGLTLYTAAFVCEVVRSGINTVPVGQAEAARALGFTFTQTLGQVVLPQAVRAV 142 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGG--TIINQTGQAIEIILIWMFIYLSLSIM- 380 +PP+T+ + LLKN++ +A GFA + ++G +++++ G + + L+W+ ++ + + Sbjct: 143 VPPMTNVQIALLKNTT--IASGFA-VFNMGNVYSVLSERGYNVLVGLLWVALFFIILVAP 199 Query: 381 IALFMNRLNAK 391 + L RL+A+ Sbjct: 200 LTLLQRRLDAR 210 >gi|171059368|ref|YP_001791717.1| polar amino acid ABC transporter inner membrane subunit [Leptothrix cholodnii SP-6] gi|171060693|ref|YP_001793042.1| polar amino acid ABC transporter inner membrane subunit [Leptothrix cholodnii SP-6] gi|170776813|gb|ACB34952.1| polar amino acid ABC transporter, inner membrane subunit [Leptothrix cholodnii SP-6] gi|170778138|gb|ACB36277.1| polar amino acid ABC transporter, inner membrane subunit [Leptothrix cholodnii SP-6] Length = 247 Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 66/195 (33%), Positives = 102/195 (52%), Gaps = 13/195 (6%) Query: 195 VLGIVLSLFATRLSRHFHEKTGKALPLLYIS-TFLIFGLPTLVLIALKYQLHFDKPVLGQ 253 VL ++++L L F +AL L S T L +P LV I L Y H + Sbjct: 47 VLALIVALAVGSLMGIFRTTPSRALVALGNSWTELFRNIPLLVQIFLWY--HVLPQIFPS 104 Query: 254 FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313 I P F+ + + L +T+A ++E V++G+ +P+GQ A +A+GLT + R Sbjct: 105 LQAI------PSFILVVVGLGFFTSARVSEQVKAGIQTLPKGQRYAGLAMGLTLPQTYRY 158 Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI 373 VLLP A R +IPPLTS+ +N++KNSS+A AV +L +T + +EI L + Sbjct: 159 VLLPMAFRIVIPPLTSESMNIIKNSSVAFAVSVTELTMFAMQAQEETSRGVEIYLAVTAL 218 Query: 374 YLSLSIMIALFMNRL 388 Y + A F+NR+ Sbjct: 219 YF----ISAFFINRV 229 Score = 39.7 bits (91), Expect = 0.91, Method: Compositional matrix adjust. Identities = 31/109 (28%), Positives = 53/109 (48%), Gaps = 5/109 (4%) Query: 71 EIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICR 130 E+ G + D +Y +L + T +A +I A +G+L+G R + ++ + + Sbjct: 17 EVVAGCLGSGGDITYLDWLLSAWGWTLSVAVLALIVALAVGSLMGIFRTTPSRALVALGN 76 Query: 131 VYVEVFRNIPPLVVIFFLYKSVLSVLP----IPDHS-IVLPFGMFLNNR 174 + E+FRNIP LV IF Y + + P IP +V+ G F + R Sbjct: 77 SWTELFRNIPLLVQIFLWYHVLPQIFPSLQAIPSFILVVVGLGFFTSAR 125 >gi|330973076|gb|EGH73142.1| amino acid ABC transporter permease [Pseudomonas syringae pv. aceris str. M302273PT] Length = 146 Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 46/137 (33%), Positives = 78/137 (56%) Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317 G T F S +A + AA+ EIVR+G+ ++ +GQM AA ALG+ + + RL++LP Sbjct: 10 GEDTPIGAFASCVVAFMMFEAAYFCEIVRAGVQSISKGQMGAAQALGMNYSQMMRLIILP 69 Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377 QA R + P L Q + L +++SL VG D ++ + + G+A E ++I +Y ++ Sbjct: 70 QAFRKMTPLLLQQSIILFQDTSLVYTVGLVDFLNASRSSGDIIGRANEFLIIAGLVYFTI 129 Query: 378 SIMIALFMNRLNAKIAL 394 S +L + RL + A+ Sbjct: 130 SFAASLLVKRLQKRFAV 146 >gi|322833090|ref|YP_004213117.1| polar amino acid ABC transporter inner membrane subunit [Rahnella sp. Y9602] gi|321168291|gb|ADW73990.1| polar amino acid ABC transporter, inner membrane subunit [Rahnella sp. Y9602] Length = 257 Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 44/104 (42%), Positives = 66/104 (63%) Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321 ++PEF+ L+ +TAAF+ E V++GL +VP+GQ EAAI+ G + + +LLPQA+ Sbjct: 110 LTPEFLCAAWGLALFTAAFLVEEVQAGLNSVPKGQTEAAISQGFSRKTLLLSILLPQALT 169 Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365 + P+T QYLNL+K SSLA +GF++L I + A E Sbjct: 170 NAWQPVTGQYLNLMKLSSLATGIGFSELTYQVSQIESYNAHAFE 213 Score = 42.4 bits (98), Expect = 0.14, Method: Compositional matrix adjust. Identities = 24/69 (34%), Positives = 40/69 (57%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 I+ GF+ T +++ +G + AT++ L+ A RLS +++ +V VFRN P LV + F Sbjct: 19 IISGFLTTLYVSLAGSLIATLLTVLLIALRLSTSRIARGAVAAFVSVFRNTPLLVQLLFW 78 Query: 149 YKSVLSVLP 157 Y + LP Sbjct: 79 YFAAYGALP 87 >gi|315444883|ref|YP_004077762.1| amino acid ABC transporter membrane protein 2, PAAT family [Mycobacterium sp. Spyr1] gi|315263186|gb|ADT99927.1| amino acid ABC transporter membrane protein 2, PAAT family [Mycobacterium sp. Spyr1] Length = 291 Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 68/224 (30%), Positives = 112/224 (50%), Gaps = 31/224 (13%) Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI---FGLPTLVLI 238 T+ A V + +LG VL + RLS H P+ ++S+ L+ +P L+++ Sbjct: 71 TLTAAAVSIVLALILGFVLGV--GRLSTH--------TPIRWVSSVLVEFFRAVPVLIMM 120 Query: 239 ALKYQLH-----FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293 Y L+ F L I G L+ Y A IAEIVR+G+ A+P Sbjct: 121 IFAYFLYAFYDVFPSKYLALAGVITG-------------LTLYNGAVIAEIVRAGVHALP 167 Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353 RGQ EA+ ALGLT + R +LLPQA+ S++P L SQ + +LK+++L + F ++V G Sbjct: 168 RGQAEASSALGLTWGQTMRSILLPQAVTSMLPVLISQLVVVLKDTALGYQITFVEMVRQG 227 Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 I + G I +++ + ++L+ ++ F L ++ K Sbjct: 228 TVIGSAYGNYIPALIVIAALMIALNFSLSWFATWLEKRMRRSRK 271 Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust. Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 1/86 (1%) Query: 64 LSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK 123 L ER ++ P+ + + T +L G T A ++ A I+G ++G GRLS + Sbjct: 40 LDERGQLTAEK-WEPFLTGDLWRTYVLPGIEGTLTAAAVSIVLALILGFVLGVGRLSTHT 98 Query: 124 LVAWICRVYVEVFRNIPPLVVIFFLY 149 + W+ V VE FR +P L+++ F Y Sbjct: 99 PIRWVSSVLVEFFRAVPVLIMMIFAY 124 >gi|296129395|ref|YP_003636645.1| polar amino acid ABC transporter, inner membrane subunit [Cellulomonas flavigena DSM 20109] gi|296021210|gb|ADG74446.1| polar amino acid ABC transporter, inner membrane subunit [Cellulomonas flavigena DSM 20109] Length = 292 Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 43/86 (50%), Positives = 63/86 (73%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F ++ L+ Y A IAEIVR+GL ++P+GQ EAA A+GL+ + RLVLLPQA+R++ P Sbjct: 141 FAAVVFGLTVYNMAIIAEIVRAGLASLPKGQSEAAYAVGLSRGQTLRLVLLPQALRTMAP 200 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVS 351 L +Q + LLK+SSL VG+A+L++ Sbjct: 201 SLVAQLVVLLKDSSLGFIVGYAELLN 226 >gi|149010774|ref|ZP_01832145.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP19-BS75] gi|147765255|gb|EDK72184.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP19-BS75] Length = 225 Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 49/131 (37%), Positives = 76/131 (58%), Gaps = 3/131 (2%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P + + + + Y A+IAE++RSG+ ++P GQMEAA++ G T+ A RL++LPQA R I Sbjct: 91 PIYWTAVLCVGLYHGAYIAEVIRSGIQSIPSGQMEAALSQGFTYISALRLIILPQAFRII 150 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 + PLT+Q +NL+KN+S + DL+ V + G I L +Y +L +A Sbjct: 151 LLPLTNQIVNLIKNTSTVAIISGVDLMFVTKSWSALNGNYIPGFLGAALLYFALCFPVAQ 210 Query: 384 F---MNRLNAK 391 F M + N K Sbjct: 211 FGRKMEQANKK 221 Score = 36.6 bits (83), Expect = 7.4, Method: Compositional matrix adjust. Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 5/76 (6%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151 GF+ T LA I A ++G GA S ++ + R++VE ++N P LV ++ Sbjct: 20 GFLFTLALAIGSFILAMVLGIFFGAMSTSKRPILRILARIFVEFYQNTPLLVQFVIVFYG 79 Query: 152 VLSVLP-IPDHSIVLP 166 LP I DH I++P Sbjct: 80 ----LPLISDHIIMIP 91 >gi|312198105|ref|YP_004018166.1| polar amino acid ABC transporter inner membrane protein [Frankia sp. EuI1c] gi|311229441|gb|ADP82296.1| polar amino acid ABC transporter, inner membrane subunit [Frankia sp. EuI1c] Length = 336 Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 57/147 (38%), Positives = 82/147 (55%), Gaps = 25/147 (17%) Query: 218 ALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT 277 A+P+L + F+ GLPT+ L D PV F L + L+ Y Sbjct: 110 AIPVLLLIYFIGLGLPTIGL---------DLPV---------------FWFLVLGLTLYN 145 Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 +AF AEI R+G++A+P GQ EAA ALGL A R V+LPQA+R ++P L SQY+ LLK+ Sbjct: 146 SAFFAEIFRTGIVALPSGQREAAAALGLGFWPAMRFVVLPQAIRRMVPSLLSQYIVLLKD 205 Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAI 364 +SL + + +L+ G I Q Q++ Sbjct: 206 TSLGFVLPYPELLRR-GQITGQYAQSV 231 >gi|295096062|emb|CBK85152.1| amino acid ABC transporter membrane protein 1, PAAT family (TC 3.A.1.3.-) [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 248 Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 49/133 (36%), Positives = 72/133 (54%) Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322 +PEF+ L +T+AF+ E V SGL +VP GQ EAA+A G + + R +LLPQ + + Sbjct: 110 TPEFLCSAWGLGVFTSAFLIEEVESGLRSVPAGQREAALAQGFSSWRLFRYILLPQGLAN 169 Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382 P+ QYLNL+K SSLA +GFA+L I + A+E + +YL ++ Sbjct: 170 AWQPVVGQYLNLMKLSSLASGIGFAELTYQVRQIESYNAHALEAFTVGTVLYLLTGMVTG 229 Query: 383 LFMNRLNAKIALK 395 + RL K Sbjct: 230 SVLVRLGPHSGRK 242 Score = 40.8 bits (94), Expect = 0.40, Method: Compositional matrix adjust. Identities = 23/69 (33%), Positives = 37/69 (53%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 IL GF+ T W+ +G++ A+++ RLS + I +V +FRN P LV + F Sbjct: 18 ILSGFLTTLWVTLAGIMLASLLALFFMLLRLSGGRFGTLIVSGWVSLFRNTPLLVQLLFW 77 Query: 149 YKSVLSVLP 157 Y + + LP Sbjct: 78 YFAAWNGLP 86 >gi|258404611|ref|YP_003197353.1| polar amino acid ABC transporter, inner membrane subunit [Desulfohalobium retbaense DSM 5692] gi|257796838|gb|ACV67775.1| polar amino acid ABC transporter, inner membrane subunit [Desulfohalobium retbaense DSM 5692] Length = 293 Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 44/123 (35%), Positives = 73/123 (59%) Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326 +S + L+ Y A+I EIVRSG+ ++ RGQ EAA ALGL+ + R V+LPQA+R +IPP Sbjct: 164 ISAVVTLALYEGAYITEIVRSGIQSIERGQWEAAYALGLSKFEQLRYVILPQAVRRVIPP 223 Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386 LT Q+++ +K+S++ + +L G ++ T E+ + +Y L+ +L Sbjct: 224 LTGQFISTIKDSAIVSVISVPELTFQGMELMAATYLTFEVWITVTVLYFLLTFSCSLLAR 283 Query: 387 RLN 389 R+ Sbjct: 284 RIE 286 >gi|225025180|ref|ZP_03714372.1| hypothetical protein EIKCOROL_02074 [Eikenella corrodens ATCC 23834] gi|224942039|gb|EEG23248.1| hypothetical protein EIKCOROL_02074 [Eikenella corrodens ATCC 23834] Length = 259 Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 45/121 (37%), Positives = 74/121 (61%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +ALS + A+I E+ RSG+ ++ RGQMEAA +LGL++ +A R ++LPQ +R ++ PL ++ Sbjct: 132 LALSFNSGAYITEVFRSGIKSIDRGQMEAARSLGLSYGQAMRYIILPQTLRRMLGPLGNE 191 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++ LLK+SSL + A+L V + + E +YL L++ +A F RL Sbjct: 192 FITLLKDSSLLATIAVAELTYVAKSAAGRYYVYEEPYYFIALVYLMLTMALAWFFARLEK 251 Query: 391 K 391 K Sbjct: 252 K 252 >gi|254471270|ref|ZP_05084672.1| amino acid ABC transporter, permease protein [Pseudovibrio sp. JE062] gi|211959416|gb|EEA94614.1| amino acid ABC transporter, permease protein [Pseudovibrio sp. JE062] Length = 319 Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 47/128 (36%), Positives = 77/128 (60%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +ALS A++ EI R+G+ AVPR Q EAA ALGL + V+LPQA+R IIPP + Sbjct: 190 LALSLSYGAYMTEIFRAGIQAVPREQSEAAAALGLQPWQTMWKVVLPQAIRIIIPPTGNN 249 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++++LK+SSL A+G +L+ + T+ + E+++ IY ++S + + RL Sbjct: 250 FISMLKDSSLVSAMGIMELMYLARTLGRSEFKHFEMLISAALIYWAVSFVFEMIQARLEK 309 Query: 391 KIALKEKK 398 + A +K+ Sbjct: 310 RFATSQKR 317 >gi|15900711|ref|NP_345315.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae TIGR4] gi|182683734|ref|YP_001835481.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae CGSP14] gi|14972296|gb|AAK74955.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae TIGR4] gi|182629068|gb|ACB90016.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae CGSP14] Length = 229 Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 61/210 (29%), Positives = 116/210 (55%), Gaps = 21/210 (10%) Query: 195 VLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF---GLPTLVLIALKYQL-HFDKPV 250 +LG+VL+ F R K PL++++ ++ G P +V I + + L H + P Sbjct: 35 ILGVVLA-FGQR---------SKFKPLVWLANLYVWIFRGTPMMVQIMIAFALMHINAPT 84 Query: 251 LGQFNFIGG--STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308 + Q +G S + P + +S + A+++E VR+G+ AVP+GQ+EAA +LG+ + Sbjct: 85 I-QIGILGVDFSRLIPGIL----IISMNSGAYVSETVRAGINAVPKGQLEAAYSLGIRPK 139 Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368 A R V+LPQA+++I+P L ++++ ++K+SSL A+G +L + T+ T + +L Sbjct: 140 NAMRYVILPQAVKNILPALGNEFITIIKDSSLLSAIGVMELWNGATTVSTTTYLPLTPLL 199 Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 F YL ++ ++ + + + +KK Sbjct: 200 FAAFYYLIMTSILTVALKAFEKHMGQGDKK 229 >gi|49474412|ref|YP_032454.1| amino acid permease [Bartonella quintana str. Toulouse] gi|49239916|emb|CAF26314.1| Amino acid permease [Bartonella quintana str. Toulouse] Length = 250 Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 46/115 (40%), Positives = 72/115 (62%) Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 AL +T+A IAE VRSG+ A+P GQ AA+A+G T + R ++LP+A+R I+PPLTS+ Sbjct: 120 ALGFFTSARIAEQVRSGIEAIPSGQRYAAMAMGFTTYQTYRYIILPRALRMIMPPLTSEA 179 Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386 + ++KNSS+A AV +L+ I + E LI +Y+ +++ I + M Sbjct: 180 MGIVKNSSIAFAVSIYELMQFQYQTIEEVSHVYENYLIVTILYIFIALCIFIIMT 234 Score = 42.0 bits (97), Expect = 0.16, Method: Compositional matrix adjust. Identities = 29/80 (36%), Positives = 41/80 (51%), Gaps = 5/80 (6%) Query: 84 SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK-----LVAWICRVYVEVFRN 138 +Y +L GF NT L+ S +I A G ++G R N L+ I ++VE+ RN Sbjct: 28 TYLDTLLDGFKNTVILSVSSLILAVFFGIIIGTMRTLPNTSIIRCLLRAIGGIWVEIMRN 87 Query: 139 IPPLVVIFFLYKSVLSVLPI 158 IP LV +F Y V V P+ Sbjct: 88 IPLLVQVFLWYFVVPKVYPL 107 >gi|327438810|dbj|BAK15175.1| ABC-type amino acid transport system, permease component [Solibacillus silvestris StLB046] Length = 233 Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 51/143 (35%), Positives = 83/143 (58%), Gaps = 4/143 (2%) Query: 260 STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319 T ++S + L +AA+ AEI R+G+ ++ +GQMEAA +LGLT +A R V+LPQA Sbjct: 88 GTSQGWWVSGIVGLILNSAAYNAEIFRAGIQSIDKGQMEAARSLGLTQSQAMRKVILPQA 147 Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379 R +IPPL ++++ LLK+SSL + A+++ V + + E L F+YL L+ Sbjct: 148 FRRMIPPLGNEFIALLKDSSLVTVIAGAEILYVSKVVAGTYQRFWEPYLFAAFLYLVLTY 207 Query: 380 ----MIALFMNRLNAKIALKEKK 398 +IA R++ ++KK Sbjct: 208 AVTKLIAFIERRVDINYNPRKKK 230 Score = 41.2 bits (95), Expect = 0.29, Method: Compositional matrix adjust. Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 3/66 (4%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151 G T L G I I G ++G G++S K + W ++YV+VFR P LV + ++ Sbjct: 22 GLWATIVLTACGYIGGIIFGLVLGLGQVSTKKWIYWPAKIYVDVFRGTPMLVQLLLIH-- 79 Query: 152 VLSVLP 157 L+V+P Sbjct: 80 -LAVIP 84 >gi|217967440|ref|YP_002352946.1| polar amino acid ABC transporter, inner membrane subunit [Dictyoglomus turgidum DSM 6724] gi|217336539|gb|ACK42332.1| polar amino acid ABC transporter, inner membrane subunit [Dictyoglomus turgidum DSM 6724] Length = 218 Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 43/109 (39%), Positives = 70/109 (64%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + LS +AA+ EI RSG+ ++ +GQMEAA +LG+T+ +A R ++LPQA R I+PPLT++ Sbjct: 93 VGLSLNSAAYTGEIFRSGIQSIDKGQMEAARSLGMTYFQAMRYIILPQAFRRILPPLTNE 152 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379 ++++LK SSLA + +L+ G I+ L IYL +++ Sbjct: 153 FVSMLKESSLASTLAVTELLRAGREIVAWKANVFSPFLGVTLIYLLMTL 201 >gi|160879005|ref|YP_001557973.1| polar amino acid ABC transporter, inner membrane subunit [Clostridium phytofermentans ISDg] gi|160427671|gb|ABX41234.1| polar amino acid ABC transporter, inner membrane subunit [Clostridium phytofermentans ISDg] Length = 235 Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 59/204 (28%), Positives = 108/204 (52%), Gaps = 16/204 (7%) Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF---LIFGLPTLVLIALKYQLHFDK 248 F+ ++G +L F + R + KTGK L ++ +I G P +V + + Y Sbjct: 40 FAVMIGALLG-FIIAIIRSTYSKTGKLRVLNFLCNIYITVIRGTPVVVQLLIIY------ 92 Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308 F G ++ F+++ +A + A+++EIVRSG+++V GQ EA +LG + Sbjct: 93 -----FVIFGSVNINKIFVAV-LAFGLNSGAYVSEIVRSGIMSVDEGQFEAGRSLGFNYN 146 Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368 + RL++LPQA+++I+P L ++++ LLK +S+ + DL G I +T A ++ Sbjct: 147 QTMRLIILPQAIKNILPALGNEFIVLLKETSVCGFIALEDLTKAGDIIRGRTYDAFMPLI 206 Query: 369 IWMFIYLSLSIMIALFMNRLNAKI 392 IYL+L I+ +N L ++ Sbjct: 207 AVALIYLTLVIIFTKLVNYLERRL 230 >gi|307329670|ref|ZP_07608828.1| polar amino acid ABC transporter, inner membrane subunit [Streptomyces violaceusniger Tu 4113] gi|306884728|gb|EFN15756.1| polar amino acid ABC transporter, inner membrane subunit [Streptomyces violaceusniger Tu 4113] Length = 214 Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 52/130 (40%), Positives = 79/130 (60%), Gaps = 11/130 (8%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IAL CYT+AFI E VR+G+ VP GQ EAA LG+T + V+LPQA RS+IPP+ S Sbjct: 89 IALGCYTSAFICEAVRAGINTVPVGQGEAARGLGMTFDQTLSAVVLPQAFRSVIPPIGST 148 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTI--INQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388 + L KNS++A + +L+ GT +N+ G ++ IW F++++ +I + Sbjct: 149 LIALAKNSAIAGSFSVTELL---GTYKPLNERGYSV----IWSFVWIAAGYLIITLA--I 199 Query: 389 NAKIALKEKK 398 +A AL E++ Sbjct: 200 SAIFALLERR 209 >gi|295836168|ref|ZP_06823101.1| glutamate permease [Streptomyces sp. SPB74] gi|295825886|gb|EDY42198.2| glutamate permease [Streptomyces sp. SPB74] Length = 227 Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 45/126 (35%), Positives = 76/126 (60%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + L YT+ F+ E VRSG+ VP GQ EAA ALGL R+ L++LPQA RS++ PL + Sbjct: 102 LGLILYTSTFVCEAVRSGINTVPMGQAEAARALGLNFRQVLTLIILPQAFRSVVNPLANV 161 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 + L KN+++A A+G + + +I + + I L++ F ++ L++ L + ++ Sbjct: 162 LIALTKNTTIAAAIGVGEAAVLMKEMIENEAELVLISLVFAFGFVVLTLPTGLILGWVSK 221 Query: 391 KIALKE 396 K+A+K Sbjct: 222 KVAIKR 227 >gi|332111084|gb|EGJ11116.1| polar amino acid ABC transporter inner membrane subunit [Rubrivivax benzoatilyticus JA2] Length = 250 Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 50/132 (37%), Positives = 82/132 (62%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+S +ALS A+I+EI R+G++++ RGQ +AA ++GLTH +A R V+LPQA R ++P Sbjct: 119 FLSGCVALSLNAGAYISEIFRAGILSIHRGQTQAAYSVGLTHAQAMRYVVLPQAFRRMVP 178 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 L ++ + L+K+SSL A+G A+L T+ + E L +YL L++ ++L Sbjct: 179 ALVNEGVTLIKDSSLVSAIGLAELALAARTVAGAYSRYWEPYLAISAMYLVLTLTLSLLA 238 Query: 386 NRLNAKIALKEK 397 RL A L+ + Sbjct: 239 KRLEAPAHLRGR 250 >gi|253584218|ref|ZP_04861416.1| amino acid transport system permease [Fusobacterium varium ATCC 27725] gi|251834790|gb|EES63353.1| amino acid transport system permease [Fusobacterium varium ATCC 27725] Length = 241 Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 60/211 (28%), Positives = 109/211 (51%), Gaps = 19/211 (9%) Query: 195 VLGIVLSLFATRLS-RHFH--------EKTGKALPLLYISTFLIFGLPTLVLIALKYQLH 245 ++G++L +F + HF+ EK L + LI G P +V QL Sbjct: 41 LIGVILGIFIALMELSHFYPLKHRKGWEKFNPLSSLAFAYVDLIRGTPAVV------QLM 94 Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305 +L F+G +P + ++ + A++AEI+R+G+ + +GQMEAA ALG+ Sbjct: 95 ----ILANLIFVGALRDTPILVIAGLSFGINSGAYVAEIIRAGIEGLDKGQMEAARALGM 150 Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365 + A + +++PQA++ I+P L S+++ LLK +S+ +G DL+ I +QT + +E Sbjct: 151 PYGIAMKEIIIPQAVKKILPALVSEFITLLKETSIVGFIGGVDLLRSANIITSQTYRGVE 210 Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 +L IYL L+ + FM + + + + Sbjct: 211 PLLAVGLIYLVLTAVFTKFMRGIEKGLKVSD 241 >gi|30018609|ref|NP_830240.1| cystine transport system permease protein [Bacillus cereus ATCC 14579] gi|296501181|ref|YP_003662881.1| cystine transport system permease [Bacillus thuringiensis BMB171] gi|29894150|gb|AAP07441.1| Cystine transport system permease protein [Bacillus cereus ATCC 14579] gi|296322233|gb|ADH05161.1| cystine transport system permease protein [Bacillus thuringiensis BMB171] Length = 230 Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 74/223 (33%), Positives = 117/223 (52%), Gaps = 19/223 (8%) Query: 177 SFPTLTMDT--NAKIFVFSFVLGIVLSL-FATRLSRHFHEKTGKALPLLYISTFLIFGLP 233 S+PTL T ++ + S VLG ++ L FA R + K ++ +YI+ +I G P Sbjct: 8 SYPTLLKATIVTLQLTLTSLVLGSLIGLLFA--FFRISNNKVLNSIAHVYIA--IIRGTP 63 Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293 +V IA+ Y F +P F + IAL+ + A+I EI R + +V Sbjct: 64 LIVQIAILY-----------FGITSVVVFTP-FWAGAIALAIHNGAYITEIFRGSIQSVD 111 Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353 RGQ+EAA +LG+ + A R ++LPQA R +PPL +Q++ LK+SSL VG ++L G Sbjct: 112 RGQLEAARSLGMPYPLAMRRIILPQAFRLSLPPLGNQFIIGLKDSSLVAYVGMSELWGSG 171 Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 +I Q ++ +I YL L ++ F+N L ++ KE Sbjct: 172 LSIAAGNFQQLDTYIIVGAYYLILVLLFTYFVNLLEKRLQRKE 214 Score = 37.4 bits (85), Expect = 4.7, Method: Compositional matrix adjust. Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 1/74 (1%) Query: 83 SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142 SSY T +L + T L + ++ ++IG L R+S NK++ I VY+ + R P + Sbjct: 7 SSYPT-LLKATIVTLQLTLTSLVLGSLIGLLFAFFRISNNKVLNSIAHVYIAIIRGTPLI 65 Query: 143 VVIFFLYKSVLSVL 156 V I LY + SV+ Sbjct: 66 VQIAILYFGITSVV 79 >gi|323143936|ref|ZP_08078594.1| glutamine ABC transporter permease protein [Succinatimonas hippei YIT 12066] gi|322416300|gb|EFY06976.1| glutamine ABC transporter permease protein [Succinatimonas hippei YIT 12066] Length = 218 Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 63/198 (31%), Positives = 108/198 (54%), Gaps = 17/198 (8%) Query: 196 LGIVLSLFA--TRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ 253 LG ++ LF LSR+++ + + + +I G P LV I + ++F P+ Sbjct: 34 LGTLIGLFVGIAELSRYWYFRIPSKIYVDFIR-----GTPLLVQI---FIIYFALPI--- 82 Query: 254 FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313 I G V P F++ A S + A++AEI R+G+ ++ +GQMEA +LG++ + Sbjct: 83 ---ILGVRVEP-FVAAVAACSINSGAYVAEIFRAGIQSIDKGQMEAGRSLGMSWGQTMIH 138 Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI 373 +++PQA R IIP L ++++ +LK+SSL +GF +L G II T ++EI I Sbjct: 139 IVIPQAFRRIIPQLGNEFIAMLKDSSLVSVIGFEELTRKGQLIIASTYGSLEIWTAVAII 198 Query: 374 YLSLSIMIALFMNRLNAK 391 YL +++ I F+ L + Sbjct: 199 YLIMTLSITRFVAFLEKR 216 >gi|37681432|ref|NP_936041.1| ABC-type glutamine transport system, permease component [Vibrio vulnificus YJ016] gi|37200184|dbj|BAC96012.1| ABC-type glutamine transport system, permease component [Vibrio vulnificus YJ016] Length = 246 Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 57/183 (31%), Positives = 100/183 (54%), Gaps = 31/183 (16%) Query: 191 VFSFVLGIVLSLFA-------TRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243 +F+ LG++++L A RL+R + E +A+P+L + ++ +GLPTL+ ++L + Sbjct: 57 LFAMTLGLMVALPALSPRKSLQRLNRIYVEVI-RAIPVLVLLLWVYYGLPTLLDVSLDH- 114 Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 + + IAL+ +AF+AE+ R G+ ++ RGQ EAA +L Sbjct: 115 ----------------------YWAGIIALTIAESAFMAEVFRGGIQSIGRGQHEAAKSL 152 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363 GL + + RLV+LPQA R ++P L +Q++ +LK SSL +G +DL ++ Sbjct: 153 GLNYWQKMRLVILPQAFRQMLPALGNQFVYILKMSSLVSVIGLSDLTRRANELVVNEYLP 212 Query: 364 IEI 366 +EI Sbjct: 213 LEI 215 Score = 40.8 bits (94), Expect = 0.41, Method: Compositional matrix adjust. Identities = 24/74 (32%), Positives = 43/74 (58%), Gaps = 1/74 (1%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 ++ GF +T ++ M+ A +G +V LS K + + R+YVEV R IP LV++ ++ Sbjct: 41 LIAGFADTISVSLLSMLFAMTLGLMVALPALSPRKSLQRLNRIYVEVIRAIPVLVLLLWV 100 Query: 149 YKSVLSVLPIP-DH 161 Y + ++L + DH Sbjct: 101 YYGLPTLLDVSLDH 114 >gi|257077631|ref|ZP_05571992.1| amino acid ABC transporter [Enterococcus faecalis JH1] gi|256985661|gb|EEU72963.1| amino acid ABC transporter [Enterococcus faecalis JH1] Length = 149 Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 50/153 (32%), Positives = 88/153 (57%), Gaps = 7/153 (4%) Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299 L + ++F P + FN P F++ I L+ +A+I+EIVR G+ AVP GQMEA Sbjct: 3 LAFFIYFGLPGVLGFNI-------PVFIAGIITLTLNASAYISEIVRGGIKAVPVGQMEA 55 Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359 + +LGL++ + + ++LPQA+R +IP +Q++ LK++++ A+G +L+ G I+ + Sbjct: 56 SRSLGLSYNRTMQKIILPQAIRIMIPSFINQFVISLKDTTILSAIGLIELLQTGKIIVAR 115 Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 T Q+ + + IYL L + L K+ Sbjct: 116 TLQSTMVYFVIALIYLILITSLTKLAKNLEKKV 148 >gi|197336799|ref|YP_002157984.1| amino acid ABC transporter permease protein [Vibrio fischeri MJ11] gi|197314051|gb|ACH63500.1| amino acid ABC transporter permease protein [Vibrio fischeri MJ11] Length = 286 Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 55/160 (34%), Positives = 85/160 (53%), Gaps = 1/160 (0%) Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291 +P L L L + D +L QF F G + + + + + +AA+I E+VRSGL A Sbjct: 128 VPLLGLENLLREHSGDINLLQQFLF-GSANLWENLTAGVLCIGMISAAYIGEVVRSGLDA 186 Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 +P+GQ EAA LGL+ R ++ PQ + IIPPL Q ++L+K+SS+ + +L Sbjct: 187 IPKGQHEAAKTLGLSTWHRYRYIIAPQVFKVIIPPLAGQCISLVKDSSIISLISIQELTF 246 Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 VG + N +G EI ++ F Y L M++ N K Sbjct: 247 VGTEMANSSGMIFEIWIVVAFCYFILCFMLSQLFNYWERK 286 Score = 40.8 bits (94), Expect = 0.41, Method: Compositional matrix adjust. Identities = 26/70 (37%), Positives = 37/70 (52%), Gaps = 9/70 (12%) Query: 74 QGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYV 133 G +PY D ++T L TFW GM+ A G L+G GR S ++ + Y+ Sbjct: 54 DGSLPYFFDGLFSTLRL-----TFW----GMLFAICFGVLLGLGRSSNLTVIRALSNSYI 104 Query: 134 EVFRNIPPLV 143 ++ RNIPPLV Sbjct: 105 QLIRNIPPLV 114 >gi|110802404|ref|YP_697895.1| amino acid ABC transporter permease [Clostridium perfringens SM101] gi|110682905|gb|ABG86275.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Clostridium perfringens SM101] Length = 223 Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 42/109 (38%), Positives = 77/109 (70%), Gaps = 1/109 (0%) Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327 S IA+S +AA+++EI+R+G+ AV +GQ+EAA +LG+T A RL++LPQA+++I+P + Sbjct: 96 SCIIAISLNSAAYVSEIIRAGIDAVDKGQLEAARSLGMTEGMAMRLIILPQAIKNILPAI 155 Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE-IILIWMFIYL 375 ++++ ++K SS+A +G A+L+ + T + E +I+I MF ++ Sbjct: 156 GNEFVAIIKESSMASTIGVAELMYSSKIVTGATYKGFEPLIVIAMFYFV 204 >gi|315638191|ref|ZP_07893373.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Campylobacter upsaliensis JV21] gi|315481727|gb|EFU72349.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Campylobacter upsaliensis JV21] Length = 250 Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 38/122 (31%), Positives = 73/122 (59%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + + Y A+++E+VRSG++AVP+GQ EA+ + G T+ + R +++PQ ++ I+PP+++Q Sbjct: 122 LGIGAYHGAYVSEVVRSGILAVPKGQFEASASQGFTYTQQMRYIIVPQTIKIILPPMSNQ 181 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 +NL+KN+S+ + VG +L+S + G + F+Y + +A F Sbjct: 182 MINLIKNTSVLLIVGGVELMSTADSYAADYGNYAPAYIFAAFLYFIVCYPLAYFAKFYEE 241 Query: 391 KI 392 K+ Sbjct: 242 KL 243 Score = 39.3 bits (90), Expect = 0.96, Method: Compositional matrix adjust. Identities = 20/58 (34%), Positives = 34/58 (58%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 GF+ T ++ ++ A + GT+ G S ++ R+YVE+F+N P ++ IFFLY Sbjct: 47 GFIYTLQVSVLALLIAVVFGTIGGVMATSKIAVLRAYTRIYVEIFQNTPLVIQIFFLY 104 >gi|296134851|ref|YP_003642093.1| polar amino acid ABC transporter, inner membrane subunit [Thiomonas intermedia K12] gi|294338804|emb|CAZ87138.1| Glutamate/aspartate transport system permease protein gltJ [Thiomonas sp. 3As] gi|295794973|gb|ADG29763.1| polar amino acid ABC transporter, inner membrane subunit [Thiomonas intermedia K12] Length = 242 Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 62/169 (36%), Positives = 92/169 (54%), Gaps = 25/169 (14%) Query: 190 FVFSFVLGIVLSLFATRLSRHF------HEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243 +V + VLG VL + T R + + + + +PLL F LP+++ Sbjct: 37 WVIAMVLGSVLGVVRTTKHRFWVMLGNGYVELFRNIPLLVQFFLWYFVLPSVI------- 89 Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSC---YTAAFIAEIVRSGLIAVPRGQMEAA 300 P L +F + V P + A+ C +TAA IAE V+SG+ ++PRGQ A Sbjct: 90 -----PPLKRF----ANAVDPGTFQILTAVVCLGLFTAARIAEQVKSGIQSLPRGQTFAG 140 Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349 +ALGLT + R VLLP A R IIPPLTS+ +NL+KNS++A ++G +L Sbjct: 141 LALGLTPTQTYRYVLLPMAYRIIIPPLTSESMNLVKNSAVAYSIGLTEL 189 Score = 43.5 bits (101), Expect = 0.064, Method: Compositional matrix adjust. Identities = 24/77 (31%), Positives = 42/77 (54%) Query: 81 SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140 D+++ ++L G T L + A ++G+++G R + ++ + YVE+FRNIP Sbjct: 14 GDTTWGMSLLSGLEYTLLLVVCAWVIAMVLGSVLGVVRTTKHRFWVMLGNGYVELFRNIP 73 Query: 141 PLVVIFFLYKSVLSVLP 157 LV F Y + SV+P Sbjct: 74 LLVQFFLWYFVLPSVIP 90 >gi|218676308|ref|YP_002395127.1| ABC transporter: transmembrane protein [Vibrio splendidus LGP32] gi|218324576|emb|CAV26094.1| ABC transporter: transmembrane protein [Vibrio splendidus LGP32] Length = 266 Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 69/209 (33%), Positives = 109/209 (52%), Gaps = 21/209 (10%) Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247 I + S V +++ L T L R+ + G+ L Y+ LI P LV I Y L+F Sbjct: 70 NISLISLVATLIIGL-TTALLRNSNSVVGRTLATSYVE--LIRNTPLLVQI---YLLYFV 123 Query: 248 -KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306 PVLG F + +AL+ + A+ AEI R+GL + RGQ EAA +LGL+ Sbjct: 124 FGPVLGL----------DRFSTAVLALALFQGAYTAEIFRAGLNGIARGQFEAAQSLGLS 173 Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 V+LPQ ++ +PPLT++ ++L+KNSS+ + DL + I+++T EI Sbjct: 174 KTYTYWDVILPQVVQRTLPPLTNEVISLIKNSSIVSVMAIFDLTTEARNIVSETAMPFEI 233 Query: 367 ----ILIWMFIYLSLSIMIALFMNRLNAK 391 +I++ + LSLS + A ++L A Sbjct: 234 WFSVAIIYLALTLSLSAVAAWLEHKLGAN 262 >gi|197284335|ref|YP_002150207.1| glutamate/aspartate ABC transporter permease [Proteus mirabilis HI4320] gi|227358521|ref|ZP_03842846.1| glutamate/aspartate ABC superfamily ATP binding cassette transporter, permease protein [Proteus mirabilis ATCC 29906] gi|194681822|emb|CAR41082.1| glutamate/aspartate ABC transporter, permease protein [Proteus mirabilis HI4320] gi|227161232|gb|EEI46306.1| glutamate/aspartate ABC superfamily ATP binding cassette transporter, permease protein [Proteus mirabilis ATCC 29906] Length = 224 Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 42/127 (33%), Positives = 75/127 (59%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 +S +A S + AA+ +EI+R+G+ ++ +GQ A++ALG+T + RLV+LPQA R++I Sbjct: 96 RLISAMVAFSLFEAAYYSEIIRAGIQSISKGQFSASLALGMTKSQTMRLVILPQAFRAMI 155 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 P L +Q + L +++SL + D I + G +E+IL F+Y +S ++ Sbjct: 156 PLLLTQGIVLFQDTSLVYVLSLTDFFRTAANIGERDGTQVEMILFAGFVYFIISFSASML 215 Query: 385 MNRLNAK 391 +N L + Sbjct: 216 VNFLKKR 222 Score = 37.7 bits (86), Expect = 3.4, Method: Compositional matrix adjust. Identities = 22/76 (28%), Positives = 39/76 (51%), Gaps = 7/76 (9%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY-- 149 G V T + + ++ + GT++ RLS K ++W YV FR+IP ++V+ + Y Sbjct: 19 GMVITLKITITAIVIGILWGTILAVMRLSTFKPISWFAAAYVNTFRSIPLVMVLLWFYLI 78 Query: 150 -----KSVLSVLPIPD 160 ++VL + P D Sbjct: 79 VPNILQNVLGLSPKSD 94 >gi|228956816|ref|ZP_04118601.1| Amino acid ABC transproter, permease [Bacillus thuringiensis serovar pakistani str. T13001] gi|228802857|gb|EEM49690.1| Amino acid ABC transproter, permease [Bacillus thuringiensis serovar pakistani str. T13001] Length = 251 Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 74/223 (33%), Positives = 117/223 (52%), Gaps = 19/223 (8%) Query: 177 SFPTLTMDT--NAKIFVFSFVLGIVLSL-FATRLSRHFHEKTGKALPLLYISTFLIFGLP 233 ++PTL T ++ + S VLG ++ L FA R + K ++ +YI+ +I G P Sbjct: 29 TYPTLLKATIVTLQLTLTSLVLGSLIGLLFA--FFRISNNKVLNSIAHVYIA--IIRGTP 84 Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293 +V IA+ Y F SP F + IAL+ + A+I EI R + +V Sbjct: 85 LIVQIAILY-----------FGITSVIVFSP-FWAGAIALAIHNGAYITEIFRGSIQSVD 132 Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353 RGQ+EAA +LG+ + A R ++LPQA R +PPL +Q++ LK+SSL VG ++L G Sbjct: 133 RGQLEAARSLGMPYPLAMRRIILPQAFRLSLPPLGNQFIIGLKDSSLVAYVGLSELWGSG 192 Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 +I Q ++ +I YL L ++ F+N L ++ KE Sbjct: 193 LSIAAGNFQQLDTYIIVGAYYLVLVLLFTYFVNLLEKRLQRKE 235 Score = 36.6 bits (83), Expect = 8.0, Method: Compositional matrix adjust. Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 1/74 (1%) Query: 83 SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142 S+Y T +L + T L + ++ ++IG L R+S NK++ I VY+ + R P + Sbjct: 28 STYPT-LLKATIVTLQLTLTSLVLGSLIGLLFAFFRISNNKVLNSIAHVYIAIIRGTPLI 86 Query: 143 VVIFFLYKSVLSVL 156 V I LY + SV+ Sbjct: 87 VQIAILYFGITSVI 100 >gi|229148755|ref|ZP_04277005.1| Amino acid ABC transproter, permease [Bacillus cereus m1550] gi|228634763|gb|EEK91342.1| Amino acid ABC transproter, permease [Bacillus cereus m1550] Length = 251 Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 74/223 (33%), Positives = 117/223 (52%), Gaps = 19/223 (8%) Query: 177 SFPTLTMDT--NAKIFVFSFVLGIVLSL-FATRLSRHFHEKTGKALPLLYISTFLIFGLP 233 S+PTL T ++ + S VLG ++ L FA R + K ++ +YI+ +I G P Sbjct: 29 SYPTLLKATIVTLQLTLTSLVLGSLIGLLFA--FFRISNNKVLNSIAHVYIA--IIRGTP 84 Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293 +V IA+ Y F +P F + IAL+ + A+I EI R + +V Sbjct: 85 LIVQIAILY-----------FGITSVVVFTP-FWAGAIALAIHNGAYITEIFRGSIQSVD 132 Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353 RGQ+EAA +LG+ + A R ++LPQA R +PPL +Q++ LK+SSL VG ++L G Sbjct: 133 RGQLEAARSLGMPYPLAMRRIILPQAFRLSLPPLGNQFIIGLKDSSLVAYVGMSELWGSG 192 Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 +I Q ++ +I YL L ++ F+N L ++ KE Sbjct: 193 LSIAAGNFQQLDTYIIVGAYYLVLVLLFTYFVNLLENRLQRKE 235 Score = 37.4 bits (85), Expect = 4.6, Method: Compositional matrix adjust. Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 1/74 (1%) Query: 83 SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142 SSY T +L + T L + ++ ++IG L R+S NK++ I VY+ + R P + Sbjct: 28 SSYPT-LLKATIVTLQLTLTSLVLGSLIGLLFAFFRISNNKVLNSIAHVYIAIIRGTPLI 86 Query: 143 VVIFFLYKSVLSVL 156 V I LY + SV+ Sbjct: 87 VQIAILYFGITSVV 100 >gi|300715836|ref|YP_003740639.1| Glutamate/aspartate transport system permease [Erwinia billingiae Eb661] gi|299061672|emb|CAX58788.1| Glutamate/aspartate transport system permease [Erwinia billingiae Eb661] Length = 225 Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 43/127 (33%), Positives = 78/127 (61%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 +S +A S + AA+ +EI+R+G++++ RGQ AA+ALG+T ++ +L++LPQA R+++ Sbjct: 96 RLISAMVAFSLFEAAYYSEIIRAGIVSIARGQGSAALALGMTRWQSMQLIILPQAFRAMV 155 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 P L +Q + L +++SL + AD TI G IE++L +Y +S+ +L Sbjct: 156 PLLLTQGIVLFQDTSLVYVLSLADFFRTADTIGINNGTEIEMVLFAGAVYFVISLSASLL 215 Query: 385 MNRLNAK 391 ++ L K Sbjct: 216 VSYLKKK 222 Score = 43.1 bits (100), Expect = 0.082, Method: Compositional matrix adjust. Identities = 24/65 (36%), Positives = 39/65 (60%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151 G V T + + +I + GTL+ RLS+ K V+W R+YV +FR++P ++V+ + Y Sbjct: 19 GMVITLKITVTAIIFGIVWGTLLAVMRLSSFKPVSWFARLYVNLFRSVPLVMVLLWFYLV 78 Query: 152 VLSVL 156 V S L Sbjct: 79 VPSFL 83 >gi|259908983|ref|YP_002649339.1| glutamine ABC transporter permease protein [Erwinia pyrifoliae Ep1/96] gi|224964605|emb|CAX56118.1| Glutamine transport system permease protein [Erwinia pyrifoliae Ep1/96] gi|283478993|emb|CAY74909.1| glutamine ABC transport system, inner membrane component [Erwinia pyrifoliae DSM 12163] Length = 219 Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 62/206 (30%), Positives = 114/206 (55%), Gaps = 12/206 (5%) Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248 I V V G+++ L A +R + + + L++I LI G P +V + Y F Sbjct: 25 ISVLGLVGGVIIGLVAG-FARAYGGWLSRNIALVFIE--LIRGTPIVVQVMFIY---FAL 78 Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308 P+ FN + + P F + + + + A+IAEI R ++++ RG EA +ALGL+ R Sbjct: 79 PM--AFNDL---RIDP-FSAAVVTIMINSGAYIAEITRGAVLSINRGFREAGLALGLSSR 132 Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368 + R V++P A+R ++PPL +Q++ +K++SL + +G A+L G II +A+EI Sbjct: 133 ETLRYVIMPLALRRMLPPLGNQWIVSIKDTSLFIVIGVAELTRQGQEIIAGNFRALEIWS 192 Query: 369 IWMFIYLSLSIMIALFMNRLNAKIAL 394 IYL ++++++ + RL ++ + Sbjct: 193 AVAVIYLIITLVLSFVLRRLERRMKI 218 >gi|292487613|ref|YP_003530485.1| putative glutamate/aspartate ABC transporter inner membrane protein [Erwinia amylovora CFBP1430] gi|292898852|ref|YP_003538221.1| glutamate/aspartate ABC transporter permease [Erwinia amylovora ATCC 49946] gi|291198700|emb|CBJ45809.1| glutamate/aspartate ABC transporter, permease protein [Erwinia amylovora ATCC 49946] gi|291553032|emb|CBA20077.1| putative glutamate/aspartate ABC transport system, inner membrane component [Erwinia amylovora CFBP1430] gi|312171720|emb|CBX79978.1| putative glutamate/aspartate ABC transport system, inner membrane component [Erwinia amylovora ATCC BAA-2158] Length = 225 Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 43/127 (33%), Positives = 78/127 (61%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 +S +A S + AA+ +EI+R+G++++ RGQ AA+ALG+T ++ +L++LPQA R+++ Sbjct: 96 RLISAMVAFSLFEAAYYSEIIRAGILSIARGQGNAALALGMTQWQSMQLIILPQAFRAMV 155 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 P L +Q + L +++SL + AD TI G IE++L +Y +S+ +L Sbjct: 156 PLLLTQGIVLFQDTSLVYVLSLADFFRTADTIGVNNGTEIEMVLFAGAVYFVISLSASLL 215 Query: 385 MNRLNAK 391 ++ L K Sbjct: 216 VSYLKKK 222 Score = 43.1 bits (100), Expect = 0.073, Method: Compositional matrix adjust. Identities = 24/76 (31%), Positives = 43/76 (56%), Gaps = 7/76 (9%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY-- 149 G V T + F+ ++ I GTL+ RLS+ K ++W ++YV +FR++P ++V+ + Y Sbjct: 19 GMVITLKITFTAIVFGIIWGTLLAVMRLSSFKPLSWFAKIYVNLFRSVPLVMVLLWFYLV 78 Query: 150 -----KSVLSVLPIPD 160 + VL + P D Sbjct: 79 VPGFLQQVLGLSPKTD 94 >gi|293192922|ref|ZP_06609766.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Actinomyces odontolyticus F0309] gi|292819978|gb|EFF78977.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Actinomyces odontolyticus F0309] Length = 320 Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 64/182 (35%), Positives = 100/182 (54%), Gaps = 23/182 (12%) Query: 224 ISTFLIFG--LPTLVLIALKYQLHFDKPVLG-----QFNFIGGSTVSPEFMSLYIALSCY 276 I T LIF LPTL +L F P LG + F + +P +M+ +I L Sbjct: 111 IYTQLIFWSLLPTLY-----PKLSFGVPFLGSLWGWELTFDTATYFTPFWMA-FIGLGLN 164 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 A++AEI+R+GL++VP+GQ EAA ALG+ R ++LPQAMR I+PP+ ++ +++LK Sbjct: 165 EGAYLAEIMRAGLLSVPKGQWEAATALGMPRGTIFRRIILPQAMRVIVPPIGNETISMLK 224 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQA----IEIIL---IWMFIYLSLSIMIALFMNRLN 389 +SL A+ F ++ I Q GQA + +++ IW + SL + I F+ + Sbjct: 225 TTSLVSAIPFTLELTF---IARQRGQATFAPVPLLIAAAIWYLVITSLLMWIQSFIEKYY 281 Query: 390 AK 391 K Sbjct: 282 GK 283 >gi|188534335|ref|YP_001908132.1| glutamine ABC transporter permease protein [Erwinia tasmaniensis Et1/99] gi|188029377|emb|CAO97254.1| Glutamine transport system permease protein [Erwinia tasmaniensis Et1/99] Length = 219 Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 62/206 (30%), Positives = 114/206 (55%), Gaps = 12/206 (5%) Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248 I V V G+++ L A +R + + + L++I LI G P +V + Y F Sbjct: 25 ISVLGLVGGVIIGLVAG-FARAYGGWLSRNIALVFIE--LIRGTPIVVQVMFIY---FAL 78 Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308 P+ FN + + P F + + + + A+IAEI R ++++ RG EA +ALGL+ R Sbjct: 79 PM--AFNDL---RIDP-FSAAVVTIMINSGAYIAEITRGAVLSINRGFREAGLALGLSGR 132 Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368 + R V++P A+R ++PPL +Q++ +K++SL + +G A+L G II +A+EI Sbjct: 133 ETLRYVIMPLALRRMLPPLGNQWIVSIKDTSLFIVIGVAELTRQGQEIIAGNFRALEIWS 192 Query: 369 IWMFIYLSLSIMIALFMNRLNAKIAL 394 IYL ++++++ + RL ++ + Sbjct: 193 AVAVIYLIITLVLSFVLRRLERRMKI 218 >gi|269123376|ref|YP_003305953.1| polar amino acid ABC transporter, inner membrane subunit [Streptobacillus moniliformis DSM 12112] gi|268314702|gb|ACZ01076.1| polar amino acid ABC transporter, inner membrane subunit [Streptobacillus moniliformis DSM 12112] Length = 510 Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 60/210 (28%), Positives = 113/210 (53%), Gaps = 23/210 (10%) Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLL-----YISTFLIF--GLPTLVLIALKYQL 244 F F++G++LSL R R+ ++K+ ++ + ++S ++ F G P +V + Y Sbjct: 305 FGFIIGLILSLL--RDERNVNKKSWLSIVIYNIFKYFVSIYVTFIRGTPMIVQAIIFYY- 361 Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304 F+ I G + P S I +S T A+I EIVR G+ ++ +GQ EAA ALG Sbjct: 362 --------GFSQITGINI-PALTSALIIVSYNTGAYITEIVRGGIDSIEKGQYEAAQALG 412 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364 + H R V+LPQA+R+++P + ++++ +K++S+ ++G +L + +I+ + Sbjct: 413 MNHFNIMRKVILPQAIRNVLPSVANEFIINIKDTSVLFSIGVTELFTTSKSIVGSHVRYY 472 Query: 365 EIILIWMFIYL----SLSIMIALFMNRLNA 390 E+ +I IY SLS + F +++ Sbjct: 473 EVFVITCAIYFVLTYSLSKLFRYFEKKMDG 502 >gi|187735937|ref|YP_001878049.1| polar amino acid ABC transporter, inner membrane subunit [Akkermansia muciniphila ATCC BAA-835] gi|187425989|gb|ACD05268.1| polar amino acid ABC transporter, inner membrane subunit [Akkermansia muciniphila ATCC BAA-835] Length = 494 Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 61/210 (29%), Positives = 111/210 (52%), Gaps = 20/210 (9%) Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGK-----ALPLLYISTFLIFGLPTLVLIALKYQLHF 246 FS +LGI++ F + R H+KTG AL LY++ +I G P +V + + Y + F Sbjct: 300 FSVLLGILVG-FVVAVIRATHDKTGNLRFLNALCKLYLT--VIRGTPVVVQLLMIYFVIF 356 Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306 GS + + +A + A++AEI+R G++++ +GQ EA +LGL Sbjct: 357 ------------GSVDVSKVLVAVVAFGFNSGAYVAEIIRGGIMSIDKGQFEAGRSLGLG 404 Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 + + ++LPQA ++++P L ++++ LLK +S++ + DL G I +QT A Sbjct: 405 YAQTMIYIILPQAFKNVLPSLGNEFIVLLKETSVSGYIALQDLTKGGDIIRSQTYTAFMP 464 Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 + IYLS+ ++ + + +L K+ E Sbjct: 465 LTAVALIYLSVVMLFSWMLGKLERKLKNNE 494 >gi|259416063|ref|ZP_05739983.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Silicibacter sp. TrichCH4B] gi|259347502|gb|EEW59279.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Silicibacter sp. TrichCH4B] Length = 268 Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 66/215 (30%), Positives = 112/215 (52%), Gaps = 22/215 (10%) Query: 195 VLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIFGL-PTLVLIALKYQLHFD 247 VLG+ L+L A R F+ + + +P++ + ++ F L P LV + Sbjct: 64 VLGMALALGADSRWLVLRQICRFYVEVVRGVPIIVLLLYVAFVLAPALVDL--------- 114 Query: 248 KPVLGQFNFIGGSTVS----PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 + LG +FIG + P +AL +AFIAE+ R+GL +VP GQ+EAA AL Sbjct: 115 RNWLG--SFIGLEEIRTRNFPLLWRAIVALMIAYSAFIAEVFRAGLQSVPEGQVEAAKAL 172 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363 GL + R ++ PQA+R+I+PPL + ++ L+K+SSL +G D+ +G + Sbjct: 173 GLNCWQRFRFIVFPQAIRTILPPLGNDFVALVKDSSLVSVLGVLDITQLGKVTAASNFRY 232 Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 E + IYL+++I ++L + L + K+ + Sbjct: 233 FETYNMVALIYLAMTISLSLGLRALERHLRNKQDQ 267 >gi|229042255|ref|ZP_04190007.1| Amino acid ABC transproter, permease [Bacillus cereus AH676] gi|229108024|ref|ZP_04237650.1| Amino acid ABC transproter, permease [Bacillus cereus Rock1-15] gi|229125851|ref|ZP_04254876.1| Amino acid ABC transproter, permease [Bacillus cereus BDRD-Cer4] gi|229143144|ref|ZP_04271576.1| Amino acid ABC transproter, permease [Bacillus cereus BDRD-ST24] gi|228640225|gb|EEK96623.1| Amino acid ABC transproter, permease [Bacillus cereus BDRD-ST24] gi|228657509|gb|EEL13322.1| Amino acid ABC transproter, permease [Bacillus cereus BDRD-Cer4] gi|228675424|gb|EEL30642.1| Amino acid ABC transproter, permease [Bacillus cereus Rock1-15] gi|228727046|gb|EEL78251.1| Amino acid ABC transproter, permease [Bacillus cereus AH676] Length = 251 Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 74/223 (33%), Positives = 117/223 (52%), Gaps = 19/223 (8%) Query: 177 SFPTLTMDT--NAKIFVFSFVLGIVLSL-FATRLSRHFHEKTGKALPLLYISTFLIFGLP 233 S+PTL T ++ + S VLG ++ L FA R + K ++ +YI+ +I G P Sbjct: 29 SYPTLLKATIVTLQLTLTSLVLGSLIGLLFA--FFRISNNKVLNSIAHVYIA--IIRGTP 84 Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293 +V IA+ Y F +P F + IAL+ + A+I EI R + +V Sbjct: 85 LIVQIAILY-----------FGITSVVVFTP-FWAGAIALAIHNGAYITEIFRGSIQSVD 132 Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353 RGQ+EAA +LG+ + A R ++LPQA R +PPL +Q++ LK+SSL VG ++L G Sbjct: 133 RGQLEAARSLGMPYPLAMRRIILPQAFRLSLPPLGNQFIIGLKDSSLVAYVGMSELWGSG 192 Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 +I Q ++ +I YL L ++ F+N L ++ KE Sbjct: 193 LSIAAGNFQQLDTYIIVGAYYLILVLLFTYFVNLLEKRLQRKE 235 Score = 37.4 bits (85), Expect = 4.4, Method: Compositional matrix adjust. Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 1/74 (1%) Query: 83 SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142 SSY T +L + T L + ++ ++IG L R+S NK++ I VY+ + R P + Sbjct: 28 SSYPT-LLKATIVTLQLTLTSLVLGSLIGLLFAFFRISNNKVLNSIAHVYIAIIRGTPLI 86 Query: 143 VVIFFLYKSVLSVL 156 V I LY + SV+ Sbjct: 87 VQIAILYFGITSVV 100 >gi|239626406|ref|ZP_04669437.1| glutamine ABC transporter [Clostridiales bacterium 1_7_47_FAA] gi|239516552|gb|EEQ56418.1| glutamine ABC transporter [Clostridiales bacterium 1_7_47FAA] Length = 281 Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 65/190 (34%), Positives = 102/190 (53%), Gaps = 20/190 (10%) Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL--HFDKP 249 F+ +LG++ LF K K + +YI +I G P LV + + Y +P Sbjct: 86 FATILGVIFGLFKVS-----DFKALKFIANIYID--IIRGTPLLVQVFIMYYGVGSMLRP 138 Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309 Q+N IGG+ F + + LS A++AEI+R G+ AV +GQMEAA +LGL++ K Sbjct: 139 YGFQWNMIGGA-----FSAGCVTLSLNAGAYMAEIIRGGIEAVDKGQMEAARSLGLSYGK 193 Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369 A R V+LPQA R+++P + +Q++ LK++SL +G +L I + Sbjct: 194 AMRKVILPQAFRTMLPTIINQFIISLKDTSLISVIGPRELTQNSKIIAANASSMV----- 248 Query: 370 WMFIYLSLSI 379 M IYLS++I Sbjct: 249 -MPIYLSVAI 257 Score = 40.4 bits (93), Expect = 0.45, Method: Compositional matrix adjust. Identities = 37/142 (26%), Positives = 70/142 (49%), Gaps = 15/142 (10%) Query: 107 ATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLP 166 ATI+G + G ++S K + +I +Y+++ R P LV +F +Y V S+L P Sbjct: 87 ATILGVIFGLFKVSDFKALKFIANIYIDIIRGTPLLVQVFIMYYGVGSML--------RP 138 Query: 167 FGMFLNNRGLSFP--TLTMDTNAKIFVFSFVLGIVLSLFATRL--SRHFHEKTGKALPLL 222 +G N G +F +T+ NA ++ + G + ++ ++ +R GKA+ + Sbjct: 139 YGFQWNMIGGAFSAGCVTLSLNAGAYMAEIIRGGIEAVDKGQMEAARSLGLSYGKAMRKV 198 Query: 223 YISTFLIFGLPTLV---LIALK 241 + LPT++ +I+LK Sbjct: 199 ILPQAFRTMLPTIINQFIISLK 220 >gi|220920916|ref|YP_002496217.1| polar amino acid ABC transporter inner membrane subunit [Methylobacterium nodulans ORS 2060] gi|219945522|gb|ACL55914.1| polar amino acid ABC transporter, inner membrane subunit [Methylobacterium nodulans ORS 2060] Length = 232 Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 50/119 (42%), Positives = 74/119 (62%) Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322 + EF+ IA+ AA+I+E +RSGL A+P+GQ EA+ +LG + + R+++LPQAMR Sbjct: 98 NSEFLFAAIAIGLCMAAYISEDLRSGLRAIPKGQYEASQSLGFGYAETMRVIVLPQAMRV 157 Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 +P L +Q L L KN+SLA+A+G A+L I + T + E I +YL LS I Sbjct: 158 SLPALVNQTLLLFKNTSLAMAIGVAELTYRTREIESATFRTFEAFAIATALYLILSFTI 216 Score = 45.8 bits (107), Expect = 0.013, Method: Compositional matrix adjust. Identities = 24/59 (40%), Positives = 33/59 (55%), Gaps = 6/59 (10%) Query: 110 IGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLP------IPDHS 162 IGTL+ R++ N+ V W YVE RN+P LV I F Y V ++LP + DH+ Sbjct: 40 IGTLLAVVRVAGNRWVEWAIAAYVEFQRNVPMLVHILFWYFGVAALLPDAIADWVNDHN 98 >gi|57242094|ref|ZP_00370034.1| amino acid ABC transporter, permease protein [Campylobacter upsaliensis RM3195] gi|57017286|gb|EAL54067.1| amino acid ABC transporter, permease protein [Campylobacter upsaliensis RM3195] Length = 250 Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 38/122 (31%), Positives = 73/122 (59%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + + Y A+++E+VRSG++AVP+GQ EA+ + G T+ + R +++PQ ++ I+PP+++Q Sbjct: 122 LGIGAYHGAYVSEVVRSGILAVPKGQFEASASQGFTYTQQMRYIIVPQTIKIILPPMSNQ 181 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 +NL+KN+S+ + VG +L+S + G + F+Y + +A F Sbjct: 182 MINLIKNTSVLLIVGGVELMSTADSYAADYGNYAPAYIFAAFLYFIVCYPLAYFAKFYEE 241 Query: 391 KI 392 K+ Sbjct: 242 KL 243 Score = 39.3 bits (90), Expect = 1.0, Method: Compositional matrix adjust. Identities = 20/58 (34%), Positives = 34/58 (58%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 GF+ T ++ ++ A + GT+ G S ++ R+YVE+F+N P ++ IFFLY Sbjct: 47 GFIYTLQVSVLALLIAVVFGTIGGVMATSKIAVLRAYTRIYVEIFQNTPLVIQIFFLY 104 >gi|297156307|gb|ADI06019.1| putative glutamate ABC transporter permease protein [Streptomyces bingchenggensis BCW-1] Length = 214 Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 51/122 (41%), Positives = 75/122 (61%), Gaps = 9/122 (7%) Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321 V P F +AL CYT+AFI E VRSG+ VP GQ EAA +LG+ + V+LPQA R Sbjct: 80 VLPFFTFAVLALGCYTSAFICEAVRSGINTVPVGQGEAARSLGMNFPQTLGSVVLPQAFR 139 Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI--INQTGQAIEIILIWMFIYLSLSI 379 ++IPP+ S + L KNS++A + +L+ GT +N+ G +I IW F++++L Sbjct: 140 TVIPPIGSTLIALAKNSAIAGSFSVTELL---GTYKPLNERGYSI----IWTFVWIALGY 192 Query: 380 MI 381 +I Sbjct: 193 LI 194 >gi|86144264|ref|ZP_01062596.1| amino acid ABC transporter, permease protein [Vibrio sp. MED222] gi|85837163|gb|EAQ55275.1| amino acid ABC transporter, permease protein [Vibrio sp. MED222] Length = 265 Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 69/209 (33%), Positives = 109/209 (52%), Gaps = 21/209 (10%) Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247 I + S V +++ L T L R+ + G+ L Y+ LI P LV I Y L+F Sbjct: 69 NISLISLVATLIIGL-TTALLRNSNSVVGRTLATSYVE--LIRNTPLLVQI---YLLYFV 122 Query: 248 -KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306 PVLG F + +AL+ + A+ AEI R+GL + RGQ EAA +LGL+ Sbjct: 123 FGPVLGL----------DRFSTAVLALALFQGAYTAEIFRAGLNGIARGQFEAAQSLGLS 172 Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 V+LPQ ++ +PPLT++ ++L+KNSS+ + DL + I+++T EI Sbjct: 173 KTYTYWDVILPQVVQRTLPPLTNEVISLIKNSSIVSVMAIFDLTTEARNIVSETAMPFEI 232 Query: 367 ----ILIWMFIYLSLSIMIALFMNRLNAK 391 +I++ + LSLS + A ++L A Sbjct: 233 WFSVAIIYLALTLSLSAVAAWLEHKLGAN 261 >gi|239833358|ref|ZP_04681686.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium LMG 3301] gi|239821421|gb|EEQ92990.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium LMG 3301] Length = 224 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 73/241 (30%), Positives = 119/241 (49%), Gaps = 30/241 (12%) Query: 160 DHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKAL 219 D SIV P+ L LT+ A F+ SFVLGI +L + A Sbjct: 10 DFSIVTPYTDLLLTGLWWTLVLTV---ASAFL-SFVLGIAFALVV------LYAPAILAW 59 Query: 220 PLLYISTFLIFGLPTLVLIALKY----QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSC 275 P+ + +L G P L+ + L Y Q+ D P LG + I LS Sbjct: 60 PVRFF-MWLFMGTPLLLQLFLIYFGLVQIGIDIPALG---------------AGIIGLSL 103 Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335 + A + A+I+R+G++AV GQME A ++G +H +A R V++PQA+R+ IPP+ + + LL Sbjct: 104 HFAVYNADIIRAGIVAVDPGQMEGARSIGFSHGQALRYVVIPQAIRNTIPPIGNNMIVLL 163 Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395 K++SL +G A+LV I++T E + IY +++++ + R+ K+ + Sbjct: 164 KDTSLVSIIGIAELVHSAQLAISETFSPFEFYITVAAIYYVVNLVLEAGLRRIERKVEVT 223 Query: 396 E 396 Sbjct: 224 R 224 >gi|303254039|ref|ZP_07340157.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae BS455] gi|302599019|gb|EFL66047.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae BS455] Length = 227 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 59/208 (28%), Positives = 114/208 (54%), Gaps = 17/208 (8%) Query: 195 VLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF---GLPTLVLIALKYQL-HFDKPV 250 +LG+VL+ F R K PL++++ ++ G P +V I + + L H + P Sbjct: 33 ILGVVLA-FGQR---------SKFKPLVWLANLYVWIFRGTPMMVQIMIAFALMHINAPT 82 Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 + Q +G + + +S + A+++E VR+G+ AVP+GQ+EAA +LG+ + A Sbjct: 83 I-QVGILGVDL--SRLIPGILIISMNSGAYVSETVRAGINAVPKGQLEAAYSLGIRPKNA 139 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370 R V+LPQA+++I+P L ++++ ++K+SSL A+G +L + T+ T + +L Sbjct: 140 MRYVILPQAVKNILPALGNEFITIIKDSSLLSAIGVMELWNGATTVSTTTYLPLTPLLFA 199 Query: 371 MFIYLSLSIMIALFMNRLNAKIALKEKK 398 F YL ++ ++ + + + +KK Sbjct: 200 AFYYLIMTSILTVALKAFEKHMGQGDKK 227 >gi|325168661|ref|YP_004280451.1| amino acid ABC transporter transmembrane protein [Agrobacterium sp. H13-3] gi|325064384|gb|ADY68073.1| amino acid ABC transporter membrane spanning protein [Agrobacterium sp. H13-3] Length = 290 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 64/220 (29%), Positives = 113/220 (51%), Gaps = 10/220 (4%) Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240 LT+ A VF G ++++ AT KA+ + ++ F G+P +V I Sbjct: 68 LTLQLTAGAMVFGTAFGCIVAVMATS-----QNIVLKAIAVAFVWWFR--GVPLIVQIFF 120 Query: 241 KYQLHFDKPV--LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQME 298 + + P+ +G ++ V+P ++AL + AA ++EI+R GL AV RGQ E Sbjct: 121 WFNIALFIPMVGIGTYSISINDLVTPALAG-FLALGLHEAANMSEIIRGGLTAVDRGQRE 179 Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN 358 AA +LGL + R V+LPQA+R I+PP +Q + +LK S++ +G DL++ I Sbjct: 180 AASSLGLQPLQTLRTVVLPQAIRLIVPPTGNQAIGMLKASAIVSVIGMQDLLTQAQAIYA 239 Query: 359 QTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 + IE++ + YL ++ + ++ + L +A K + Sbjct: 240 RNFLVIELLCVASLWYLLITTVASVGQHFLEKHLAPKGRD 279 >gi|326423793|ref|NP_759985.2| putative amino acid ABC transporter permease [Vibrio vulnificus CMCP6] gi|319999159|gb|AAO09512.2| Putative amino acid ABC transporter, permease protein [Vibrio vulnificus CMCP6] Length = 246 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 57/183 (31%), Positives = 100/183 (54%), Gaps = 31/183 (16%) Query: 191 VFSFVLGIVLSLFA-------TRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243 +F+ LG++++L A RL+R + E +A+P+L + ++ +GLPTL+ ++L + Sbjct: 57 LFAMTLGLMVALPALSPRKSLQRLNRIYVEVI-RAIPVLVLLLWVYYGLPTLLDVSLDH- 114 Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 + + IAL+ +AF+AE+ R G+ ++ RGQ EAA +L Sbjct: 115 ----------------------YWAGIIALTIAESAFMAEVFRGGIQSIGRGQHEAAKSL 152 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363 GL + + RLV+LPQA R ++P L +Q++ +LK SSL +G +DL ++ Sbjct: 153 GLNYWQKMRLVILPQAFRQMLPALGNQFVYILKMSSLVSVIGLSDLTRRANELVVNEYLP 212 Query: 364 IEI 366 +EI Sbjct: 213 LEI 215 Score = 40.4 bits (93), Expect = 0.43, Method: Compositional matrix adjust. Identities = 24/74 (32%), Positives = 43/74 (58%), Gaps = 1/74 (1%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 ++ GF +T ++ M+ A +G +V LS K + + R+YVEV R IP LV++ ++ Sbjct: 41 LIAGFADTISVSLLSMLFAMTLGLMVALPALSPRKSLQRLNRIYVEVIRAIPVLVLLLWV 100 Query: 149 YKSVLSVLPIP-DH 161 Y + ++L + DH Sbjct: 101 YYGLPTLLDVSLDH 114 >gi|302538462|ref|ZP_07290804.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces sp. C] gi|302447357|gb|EFL19173.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces sp. C] Length = 276 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 67/212 (31%), Positives = 112/212 (52%), Gaps = 31/212 (14%) Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF---LIFGLPTL---VLIALKYQ 243 F+F VLG+V++L RLS P ++++ L GLP L + + + Sbjct: 81 FLFGLVLGLVIALM--RLS--------SVAPYRWVASVYIELFRGLPALLIFIFVGVAVP 130 Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 L F I G T + + + L AA++AE +R+G+ AVP+GQMEAA +L Sbjct: 131 LAFPG------TAIPGGT----YGKVALGLGLVAAAYMAETIRAGIQAVPKGQMEAARSL 180 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA----DLVSVGGTIINQ 359 G +H +A V++PQA R +IPPLT++ + L K+SSL + +G +L G + ++ Sbjct: 181 GFSHGRAMVSVVIPQAFRIVIPPLTNELVLLFKDSSLVLFLGVTLEERELTKFGRDLASE 240 Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 T + IL+ YL +++ ++ + RL A+ Sbjct: 241 TANSTP-ILVAGLCYLLVTVPLSFVVRRLEAR 271 Score = 36.6 bits (83), Expect = 6.8, Method: Compositional matrix adjust. Identities = 20/69 (28%), Positives = 35/69 (50%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 I + NT SG + ++G ++ RLS+ W+ VY+E+FR +P L++ F+ Sbjct: 66 ITIALRNTVVYTLSGFLFGLVLGLVIALMRLSSVAPYRWVASVYIELFRGLPALLIFIFV 125 Query: 149 YKSVLSVLP 157 +V P Sbjct: 126 GVAVPLAFP 134 >gi|209551328|ref|YP_002283245.1| polar amino acid ABC transporter inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209537084|gb|ACI57019.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 270 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 76/225 (33%), Positives = 115/225 (51%), Gaps = 20/225 (8%) Query: 178 FPTLTMDTNAKIFV--FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235 F T+ +FV +FVL VL L L + + + YI +I G+P L Sbjct: 43 FRTVVNGVGITVFVTLVAFVLATVLGLGICLLGMA-DSQIARQIARFYIE--IIRGIPIL 99 Query: 236 VLIALKYQLHFDKPVL-GQFNFIGGSTVSPEF--------MSLY----IALSCYTAAFIA 282 VL L Y P L +NF+ VS +SL IAL+ ++FIA Sbjct: 100 VL--LFYVAFVGAPALVAGYNFLISPLVSSGMAEPILVRDLSLMWRAIIALTIGYSSFIA 157 Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342 EI R+G +V GQ+EAA ALGL+ + R V+ PQA+R I PPL++ +++++K+SSL Sbjct: 158 EIFRAGFQSVDLGQIEAAKALGLSRYRRFRSVVFPQAIRVIFPPLSNDFVSMVKDSSLVS 217 Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387 +G AD+ +G + + E I +IYL L+I ++L + R Sbjct: 218 VLGVADITQMGKVYAAGSFRFFETYSIVTYIYLILTIGLSLALRR 262 >gi|302338915|ref|YP_003804121.1| polar amino acid ABC transporter inner membrane subunit [Spirochaeta smaragdinae DSM 11293] gi|301636100|gb|ADK81527.1| polar amino acid ABC transporter, inner membrane subunit [Spirochaeta smaragdinae DSM 11293] Length = 298 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 43/125 (34%), Positives = 76/125 (60%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+S + L Y ++IAEI++SG+ +V RGQ EA+ +LGL+ TRL++LPQA R+ +P Sbjct: 166 FLSAVVTLGIYEGSYIAEIIQSGIRSVDRGQWEASYSLGLSSFDRTRLIILPQAARNALP 225 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 LT Q+++ +K+SS+ + A+L G + T + +EI +Y L+ ++ Sbjct: 226 ALTGQFISTMKDSSIVSVISIAELTFQGMELTASTYRTLEIWSAVTLLYFLLTFTASILS 285 Query: 386 NRLNA 390 +R+ + Sbjct: 286 SRIES 290 Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 26/61 (42%), Positives = 37/61 (60%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L GF+ T L+ I A IGT+VG GRL N+ + +YV + RN+PPLV++F Sbjct: 65 LLKGFLTTIRLSIWSSIIAFFIGTVVGVGRLVRNRFFRLLSGLYVSLIRNLPPLVLVFIF 124 Query: 149 Y 149 Y Sbjct: 125 Y 125 >gi|261368004|ref|ZP_05980887.1| glutamine ABC transporter, permease protein [Subdoligranulum variabile DSM 15176] gi|282569991|gb|EFB75526.1| glutamine ABC transporter, permease protein [Subdoligranulum variabile DSM 15176] Length = 255 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 44/128 (34%), Positives = 83/128 (64%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +AL + A+++EI+R GL+AV GQMEA +LGL + L+++PQA+RSI+P L ++ Sbjct: 128 LALGINSGAYVSEIIRGGLMAVDPGQMEAGRSLGLNYITTMVLIIIPQAIRSILPSLGNE 187 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++ LLK++SL +G +L+ ++N+T +A+ +L IYL L ++ + + +L Sbjct: 188 FIILLKDTSLITVIGGKELLYAAQGVMNRTYEAMFPLLGVAAIYLVLVLLFSALLGKLER 247 Query: 391 KIALKEKK 398 ++A +++ Sbjct: 248 RLAQSDRR 255 >gi|317053038|ref|YP_004119392.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea sp. At-9b] gi|316953365|gb|ADU72836.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea sp. At-9b] Length = 314 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 52/150 (34%), Positives = 82/150 (54%), Gaps = 3/150 (2%) Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308 P LG F+ + V + + + L A+++EIVRSGL AVP GQ EAA ALG++ Sbjct: 152 PSLGAFD---ANKVITVYAAALLGLGLNEGAYMSEIVRSGLSAVPNGQREAAEALGMSSF 208 Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368 + V+LPQAMR IIPP +Q + +LK +SL + DL+ I Q I +++ Sbjct: 209 RVMFRVILPQAMRIIIPPTGNQLIGMLKTTSLVSVIAMQDLLYSAQLIYTNNFQTIPLLI 268 Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 + YL L+ ++++ + L A E++ Sbjct: 269 VASLWYLVLTTVLSVLQHYLEKYFARSEQR 298 Score = 44.7 bits (104), Expect = 0.029, Method: Compositional matrix adjust. Identities = 33/113 (29%), Positives = 54/113 (47%), Gaps = 14/113 (12%) Query: 85 YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144 + +I+ G T WL + M ++GTL+ R+S N +++ + Y+ +FR P LV Sbjct: 71 FDDSIIAGLYTTAWLTLASMAIGIVLGTLIALMRMSKNPVLSTVASAYLWLFRGTPLLVQ 130 Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTL-TMDTNAKIFVFSFVL 196 + F + LS L P ++ PFG P+L D N I V++ L Sbjct: 131 LIFWFN--LSAL-YPQITLGFPFG----------PSLGAFDANKVITVYAAAL 170 >gi|37525272|ref|NP_928616.1| glutamate/aspartate transport system permease protein GltK [Photorhabdus luminescens subsp. laumondii TTO1] gi|36784699|emb|CAE13599.1| Glutamate/aspartate transport system permease protein GltK [Photorhabdus luminescens subsp. laumondii TTO1] Length = 224 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 69/212 (32%), Positives = 116/212 (54%), Gaps = 18/212 (8%) Query: 186 NAKIFVFSFVLGIVLSLFATRLS--RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243 AKI + + V+GI L+ T L+ R K LY++ F +P LV++ L + Sbjct: 23 TAKITIIAVVVGI---LWGTVLAVMRLSSVKALSWFATLYVNLFR--SVP-LVMVLLWFY 76 Query: 244 LHFDKPVLGQFNFIGGSTVSPE----FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299 L P L Q N +G +SP+ +S +A + + AA+ +EI+R+G+ ++ RGQ A Sbjct: 77 LIV--PSLVQ-NVLG---ISPKTDIRLISAMVAFAFFEAAYYSEIIRAGIQSISRGQSSA 130 Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359 A+ALG+T ++ RLV+LPQA R++ P L +Q + L +++SL + AD I + Sbjct: 131 ALALGMTPMQSMRLVILPQAFRAMTPLLLTQGIVLFQDTSLVYVLSLADFFRTAANIGER 190 Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 G +E+IL +Y +SI ++ +N L + Sbjct: 191 DGTQVEMILFAGLVYFIISIAASMLVNYLKKR 222 Score = 36.6 bits (83), Expect = 6.8, Method: Compositional matrix adjust. Identities = 22/79 (27%), Positives = 43/79 (54%), Gaps = 7/79 (8%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G V T + ++ + GT++ RLS+ K ++W +YV +FR++P ++V+ + Sbjct: 16 LLQGLVITAKITIIAVVVGILWGTVLAVMRLSSVKALSWFATLYVNLFRSVPLVMVLLWF 75 Query: 149 Y-------KSVLSVLPIPD 160 Y ++VL + P D Sbjct: 76 YLIVPSLVQNVLGISPKTD 94 >gi|312958335|ref|ZP_07772856.1| glutamine/glutamate ABC transporter, permease protein [Pseudomonas fluorescens WH6] gi|311287399|gb|EFQ65959.1| glutamine/glutamate ABC transporter, permease protein [Pseudomonas fluorescens WH6] Length = 219 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 59/175 (33%), Positives = 94/175 (53%), Gaps = 17/175 (9%) Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251 FS V G++ + R + K A+ +Y+ F +P LV + Y L F P+ Sbjct: 33 FSTVCGVLYGVL-----RTLNSKLINAVLRVYLELFR--AIPVLVWL---YLLFFGMPI- 81 Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311 F G S P F + LS + A+ + E+VR L ++PRGQ EA +++GL+ + Sbjct: 82 ----FFGLSI--PSFWCAVLVLSLWGASEVGEVVRGALHSLPRGQREAGLSIGLSDPQLY 135 Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 VLLPQA++ + PP + Y ++K SSLAV +G D++ VG II +T +++ I Sbjct: 136 GYVLLPQALKRMTPPTINVYTRIIKTSSLAVLIGVVDVIKVGQQIIERTYESVLI 190 Score = 37.0 bits (84), Expect = 5.4, Method: Compositional matrix adjust. Identities = 21/58 (36%), Positives = 34/58 (58%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 G T ++F + +T+ G L G R +KL+ + RVY+E+FR IP LV ++ L+ Sbjct: 19 GAAQTLSISFLSIAFSTVCGVLYGVLRTLNSKLINAVLRVYLELFRAIPVLVWLYLLF 76 >gi|313122913|ref|YP_004033172.1| ABC amino acid transporter permease/periplasmic component [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|312279476|gb|ADQ60195.1| ABC-type amino acid transport system, permease and periplasmic component [Lactobacillus delbrueckii subsp. bulgaricus ND02] Length = 527 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 45/126 (35%), Positives = 78/126 (61%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I +S T A++AE++R G+I+ P+GQ EAA ALG+TH + ++LPQA+R+ +P +T++ Sbjct: 384 IIVSINTGAYLAEVIRGGIISTPKGQFEAASALGMTHNQRMWSIILPQAIRNCLPSITNE 443 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++ +K++S+ + ++L VG TI +Q+ Q + L+ IYL L+ I N + Sbjct: 444 FIVNIKDTSVLSIISVSELFFVGSTIASQSFQFFQTYLVISVIYLFLTFTITRIFNLIEK 503 Query: 391 KIALKE 396 I E Sbjct: 504 HIEGPE 509 >gi|225405626|ref|ZP_03760815.1| hypothetical protein CLOSTASPAR_04847 [Clostridium asparagiforme DSM 15981] gi|225042846|gb|EEG53092.1| hypothetical protein CLOSTASPAR_04847 [Clostridium asparagiforme DSM 15981] Length = 233 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 60/233 (25%), Positives = 120/233 (51%), Gaps = 20/233 (8%) Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGK-----ALPLLYI 224 F+ + G + T+ + I F+ ++GIVL F + R +EKT K A+ +Y+ Sbjct: 16 FIEDDGWKYITVGLKNTLIITFFACLMGIVLG-FLVGMVRSTYEKTHKLKILNAICKVYL 74 Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284 + +I G P +V + + Y + F GS + + +A + A++AEI Sbjct: 75 T--VIRGTPVVVQLMIIYFVVF------------GSVRISKVLVAVLAFGINSGAYVAEI 120 Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344 RSG++++ GQ+EA +LG ++ + +++PQA ++++P L +++++LLK +S+A + Sbjct: 121 FRSGIMSIDSGQLEAGRSLGFSYWQTMWYIIMPQAFKNVLPALCNEFISLLKETSVAGYI 180 Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 DL G I ++T A + IYL++ ++ + L ++ E+ Sbjct: 181 ALQDLTKGGDIIRSRTYSAFMPLFAVALIYLTIVMIFTKLIQILERRLRQSER 233 >gi|332073151|gb|EGI83630.1| amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Streptococcus pneumoniae GA17570] Length = 209 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 60/210 (28%), Positives = 118/210 (56%), Gaps = 21/210 (10%) Query: 195 VLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF---GLPTLVLIALKYQL-HFDKPV 250 +LG+VL+ F +++ K PL++++ ++ G P +V I + + L H + P Sbjct: 15 ILGVVLA---------FGQRS-KFKPLVWLANLYVWIFRGTPMMVQIMIAFALMHINAPT 64 Query: 251 LGQFNFIGG--STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308 + Q +G S + P + +S + A+++E VR+G+ AVP+GQ+EAA +LG+ + Sbjct: 65 I-QIGILGVDFSRLIPGIL----IISMNSGAYVSETVRAGINAVPKGQLEAAYSLGIRPK 119 Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368 A R V+LPQA+++I+P L ++++ ++K+SSL A+G +L + T+ T + +L Sbjct: 120 NAMRYVILPQAIKNILPALGNEFITIIKDSSLLSAIGVMELWNGATTVSTTTYLPLTPLL 179 Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 F YL ++ ++ + + + +KK Sbjct: 180 FAAFYYLIMTSILTVALKAFEKHMGQGDKK 209 >gi|170691879|ref|ZP_02883043.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia graminis C4D1M] gi|170143163|gb|EDT11327.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia graminis C4D1M] Length = 245 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 50/133 (37%), Positives = 77/133 (57%), Gaps = 1/133 (0%) Query: 264 PEFM-SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322 P+F+ + ++L YT + I E VR+G+ A P GQ AA ALGLT +A R VLLP A R+ Sbjct: 108 PQFLIASVVSLGVYTGSRICEQVRAGIQARPVGQFHAAFALGLTRAQAYRHVLLPVAFRT 167 Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382 I+ PLTS++L + KNS++A +G +L +++ T Q E + Y++L+ I Sbjct: 168 ILGPLTSEFLIISKNSAVASTIGLLELSGQARQLVDYTAQPYESFICVTLAYMALNFAIL 227 Query: 383 LFMNRLNAKIALK 395 M + + AL Sbjct: 228 RGMRWIRRRTALH 240 >gi|308174445|ref|YP_003921150.1| glutamine ABC transporter permease [Bacillus amyloliquefaciens DSM 7] gi|307607309|emb|CBI43680.1| glutamine ABC transporter (permease) [Bacillus amyloliquefaciens DSM 7] Length = 218 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 44/123 (35%), Positives = 81/123 (65%), Gaps = 3/123 (2%) Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 AL+ + +A ++EI+RSGL +V +GQ++AA + GLT+ + LV++PQA+R ++PP+ SQ+ Sbjct: 94 ALTIFESAMLSEIIRSGLQSVEKGQIDAARSSGLTYTQTLFLVVMPQALRRMVPPIVSQF 153 Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQT---GQAIEIILIWMFIYLSLSIMIALFMNRL 388 ++LLK++SLAV + +L+ + Q+ G I L+ +Y +++ ++L RL Sbjct: 154 ISLLKDTSLAVVIALPELIHNAQILNGQSADGGYFFPIFLLAALMYFAVNYSLSLAARRL 213 Query: 389 NAK 391 A+ Sbjct: 214 EAR 216 >gi|296135302|ref|YP_003642544.1| polar amino acid ABC transporter, inner membrane subunit [Thiomonas intermedia K12] gi|295795424|gb|ADG30214.1| polar amino acid ABC transporter, inner membrane subunit [Thiomonas intermedia K12] Length = 310 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 66/213 (30%), Positives = 111/213 (52%), Gaps = 13/213 (6%) Query: 191 VFSFVLGIVLS--LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248 V S V+G+ L L RLS H YI +L G P LV I + + Sbjct: 80 VISMVIGVALGVLLAVMRLS---HNPMVSKASWFYI--WLFRGTPVLVQILFWFNITALY 134 Query: 249 PVLG--QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306 P +G ++F + ++P F++ +AL A++AEIVR+G+++V GQ EA ALG++ Sbjct: 135 PNIGFGSWSFDANNLITP-FVAAILALGLNEGAYMAEIVRAGILSVDEGQSEAGAALGMS 193 Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 + R V+LPQAMR I+PP ++ +++LK +SL + +DL+ I + + I + Sbjct: 194 RLQIMRRVVLPQAMRVIVPPTGNEAISMLKTTSLVSVIAVSDLLYSAQLIYSVNYRTIPL 253 Query: 367 IL---IWMFIYLSLSIMIALFMNRLNAKIALKE 396 +L IW I +L + ++ R + A ++ Sbjct: 254 LLVASIWYLIVTTLLSIGQFYIERHFGRSATRQ 286 >gi|294339404|emb|CAZ87760.1| putative ABC-type amino acid transport system, permease component [Thiomonas sp. 3As] Length = 310 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 66/213 (30%), Positives = 111/213 (52%), Gaps = 13/213 (6%) Query: 191 VFSFVLGIVLS--LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248 V S V+G+ L L RLS H YI +L G P LV I + + Sbjct: 80 VISMVIGVALGVLLAVMRLS---HNPMVSKASWFYI--WLFRGTPVLVQILFWFNITALY 134 Query: 249 PVLG--QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306 P +G ++F + ++P F++ +AL A++AEIVR+G+++V GQ EA ALG++ Sbjct: 135 PNIGFGSWSFDANNLITP-FVAAILALGLNEGAYMAEIVRAGILSVDEGQSEAGAALGMS 193 Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 + R V+LPQAMR I+PP ++ +++LK +SL + +DL+ I + + I + Sbjct: 194 RLQIMRRVVLPQAMRVIVPPTGNEAISMLKTTSLVSVIAVSDLLYSAQLIYSVNYRTIPL 253 Query: 367 IL---IWMFIYLSLSIMIALFMNRLNAKIALKE 396 +L IW I +L + ++ R + A ++ Sbjct: 254 LLVASIWYLIVTTLLSIGQFYIERHFGRSATRQ 286 >gi|169630136|ref|YP_001703785.1| putative glutamate ABC transporter, permease [Mycobacterium abscessus ATCC 19977] gi|169242103|emb|CAM63131.1| Putative glutamate ABC transporter, permease [Mycobacterium abscessus] Length = 286 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 58/175 (33%), Positives = 93/175 (53%), Gaps = 21/175 (12%) Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI---FGLPTLVLI 238 T+ A VF+ LG VL + RLS H + +I + L+ +P L+L+ Sbjct: 72 TVTAAALSIVFALALGAVLGI--GRLSEHRAVR--------WICSALVEFFRAIPVLILM 121 Query: 239 ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQME 298 Y L+ + V F ++ LS Y + IAEI+RSG+ ++P+GQ E Sbjct: 122 VFSYYLYGQQAVFPSEYL--------AFAAVVTGLSLYNGSVIAEILRSGIQSLPKGQSE 173 Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353 AA+ALG+ + RL+LLPQ++ +++P L SQ + LK+S+L A G+ ++V G Sbjct: 174 AAVALGMRKSQMMRLILLPQSISAMLPALISQMVIALKDSALGYAFGYIEVVRSG 228 Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 27/72 (37%), Positives = 42/72 (58%) Query: 78 PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137 P+ +++ T IL G + T A ++ A +G ++G GRLS ++ V WIC VE FR Sbjct: 54 PFLRLNTWTTYILPGLLGTVTAAALSIVFALALGAVLGIGRLSEHRAVRWICSALVEFFR 113 Query: 138 NIPPLVVIFFLY 149 IP L+++ F Y Sbjct: 114 AIPVLILMVFSY 125 >gi|300312812|ref|YP_003776904.1| glutamate/aspartate ABC transporter permease [Herbaspirillum seropedicae SmR1] gi|300075597|gb|ADJ64996.1| ABC-type glutamate/aspartate transport system, permease component protein [Herbaspirillum seropedicae SmR1] Length = 227 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 68/234 (29%), Positives = 115/234 (49%), Gaps = 13/234 (5%) Query: 160 DHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKAL 219 D S V P + + GL +++ VF V G +L++ RLSRH Sbjct: 6 DFSAVTPAALRVLGDGL---LVSLKITLVAIVFGMVWGTLLAM--MRLSRH--------S 52 Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279 PL + + + ++ L+ + P L Q F S +A + + AA Sbjct: 53 PLQWFAAGYVNLFRSIPLVMVLLWFFLIVPQLLQKLFGLSPANDLRMTSALVAFALFEAA 112 Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339 + AEI+R+G+ +V RGQM AA ALGLT+ +A +V+LPQA R+++P L +Q + L +++S Sbjct: 113 YYAEIIRAGINSVSRGQMAAAYALGLTYPQAMGMVILPQAFRNMVPLLLTQGIVLFQDTS 172 Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393 L AD +I + G+ IE++ + +Y + ++L + R K+A Sbjct: 173 LVYVSALADFFGRAYSIGERNGRIIEMLFVAGAVYFIICFSMSLMVKRYRKKVA 226 >gi|330891010|gb|EGH23671.1| glutamine ABC transporter permease [Pseudomonas syringae pv. mori str. 301020] Length = 233 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 54/148 (36%), Positives = 87/148 (58%), Gaps = 4/148 (2%) Query: 232 LPTLVLIALKYQLHFDKP-VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290 +PTLV + L Y F P +L + + + S E++ IAL AA+ +E +RSGL Sbjct: 69 VPTLVQLMLWY---FGIPTLLTESTQLWLANYSTEYLFSVIALGLCQAAYFSEDIRSGLR 125 Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 A+P GQ+EA+ ALGL + ++ R V+LPQ +R+ +P L + + L KN+SL +A+G +L Sbjct: 126 AIPAGQVEASRALGLGYVRSMRYVILPQGVRNCLPSLINHTVLLFKNTSLVMAIGVVELT 185 Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLS 378 + N T + E L+ +YL++S Sbjct: 186 YATREVENYTFRTFEAYLVATVVYLTIS 213 >gi|307130487|ref|YP_003882503.1| amino acid ABC transporter permease [Dickeya dadantii 3937] gi|306528016|gb|ADM97946.1| amino acid ABC transporter permease [Dickeya dadantii 3937] Length = 256 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 73/239 (30%), Positives = 120/239 (50%), Gaps = 21/239 (8%) Query: 160 DHSIVLPFGMFLNNR-GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKA 218 DHS++L G + N G TL + A V SF LG+++ L RLS Sbjct: 10 DHSMLLLMGQYPNGPLGGVLCTLLISLLA--VVLSFPLGVLVGL--ARLSPWRG------ 59 Query: 219 LPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTA 278 L + +T ++ L + L+ + + +F P+L N G F ++ L Y + Sbjct: 60 --LRWAATAWVYTLRGIPLMMVVFWTYFCVPLLIGQNISG-------FSTMLCTLVIYES 110 Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338 A+IAEIVR G+ A+P GQ EA+ ALG+++ K RLV+LPQA+ + +P L SQ ++++K+S Sbjct: 111 AYIAEIVRGGIQALPHGQYEASRALGMSYLKTLRLVVLPQALFNSLPSLVSQLVSIIKDS 170 Query: 339 SLAVAVGFADLVSVGGTIINQ-TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 +L + +L + NQ + ++ I Y + + N+L + IA K Sbjct: 171 TLGYVINVPELTYAANQVSNQLLTKPFQVFAIVALSYYIICFSLTWLANKLESYIANKR 229 >gi|299541805|ref|ZP_07052128.1| amino acid ABC transporter ATP-binding protein [Lysinibacillus fusiformis ZC1] gi|298725543|gb|EFI66184.1| amino acid ABC transporter ATP-binding protein [Lysinibacillus fusiformis ZC1] Length = 221 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 68/232 (29%), Positives = 124/232 (53%), Gaps = 19/232 (8%) Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL-FATRLSRHFHEKTGKALPLLYIS 225 F + + +G+ F + + ++ V S +LGI++ L FA L + + K + + +Y+ Sbjct: 8 FQILMETKGVFFKAMLL--TLELTVVSILLGIIIGLVFA--LLKISNIKILELISDIYV- 62 Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285 +L+ G P +V I + L+F I G + P+F + +AL+ + A+I+EI+ Sbjct: 63 -YLVRGTPLIVQI---FILYFG---------ISGIFLLPDFWAASLALALHNGAYISEIL 109 Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345 R + +V GQ EA +LG+T R ++LPQA R +PPL +Q++ LK+SSLA + Sbjct: 110 RGAIQSVDNGQFEAGRSLGMTKTLTLRRIILPQAFRRALPPLGNQFIISLKDSSLAAFIS 169 Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 +L +V T+ + + +LI YL L ++ +NR K+A+ ++ Sbjct: 170 MNELFNVATTLGSNNFDEMTYLLIVAVYYLLLVALMTFVVNRTELKLAVSDR 221 >gi|134298610|ref|YP_001112106.1| polar amino acid ABC transporter, inner membrane subunit [Desulfotomaculum reducens MI-1] gi|134051310|gb|ABO49281.1| amino acid ABC transporter membrane protein, PAAT family [Desulfotomaculum reducens MI-1] Length = 222 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 47/136 (34%), Positives = 80/136 (58%) Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321 V P F + +AL+ + A+IAEI R + ++ +GQMEAA +LG+++ + R ++LPQA R Sbjct: 83 VLPAFWAGSLALAIHAGAYIAEIFRGAIQSINQGQMEAARSLGMSYPLSMRRIILPQAFR 142 Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 IPPL +Q++ LK+SSL +G ++ + Q E L+ YL L I+ Sbjct: 143 RAIPPLGNQFIIGLKDSSLVAYLGVPEIYGTALYAQAENFQPFETYLVAGLYYLVLVIIF 202 Query: 382 ALFMNRLNAKIALKEK 397 + +N+L AK+ +++ Sbjct: 203 SFLVNKLEAKLNVEQN 218 >gi|300811497|ref|ZP_07091991.1| ABC transporter, permease protein [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|300497570|gb|EFK32598.1| ABC transporter, permease protein [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] Length = 527 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 45/126 (35%), Positives = 78/126 (61%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I +S T A++AE++R G+I+ P+GQ EAA ALG+TH + ++LPQA+R+ +P +T++ Sbjct: 384 IIVSINTGAYLAEVIRGGIISTPKGQFEAASALGMTHNQRMWSIILPQAIRNCLPSITNE 443 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++ +K++S+ + ++L VG TI +Q+ Q + L+ IYL L+ I N + Sbjct: 444 FIVNIKDTSVLSIISVSELFFVGSTIASQSFQFFQTYLVISVIYLFLTFTITRIFNLIEK 503 Query: 391 KIALKE 396 I E Sbjct: 504 HIEGPE 509 >gi|259909119|ref|YP_002649475.1| Glutamate/aspartate transport system permease [Erwinia pyrifoliae Ep1/96] gi|224964741|emb|CAX56258.1| Glutamate/aspartate transport system permease [Erwinia pyrifoliae Ep1/96] gi|283479147|emb|CAY75063.1| putative glutamate/aspartate ABC transport system, inner membrane component [Erwinia pyrifoliae DSM 12163] Length = 225 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 43/127 (33%), Positives = 78/127 (61%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 +S +A S + AA+ +EI+R+G++++ RGQ AA+ALG+T ++ +L++LPQA R+++ Sbjct: 96 RLISAMVAFSLFEAAYYSEIIRAGILSIARGQGNAALALGMTQWQSMQLIVLPQAFRAMV 155 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 P L +Q + L +++SL + AD TI G IE++L +Y +S+ +L Sbjct: 156 PLLLTQGIVLFQDTSLVYVLSLADFFRTADTIGVNNGTEIEMVLFAGAVYFVISLSASLL 215 Query: 385 MNRLNAK 391 ++ L K Sbjct: 216 VSYLKKK 222 Score = 44.3 bits (103), Expect = 0.031, Method: Compositional matrix adjust. Identities = 25/76 (32%), Positives = 43/76 (56%), Gaps = 7/76 (9%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY-- 149 G V T + F+ ++ I GTL+ RLS+ K V+W ++YV +FR++P ++V+ + Y Sbjct: 19 GMVITLKITFTAIVFGIIWGTLLAVMRLSSFKPVSWFAKIYVNLFRSVPLVMVLLWFYLV 78 Query: 150 -----KSVLSVLPIPD 160 + VL + P D Sbjct: 79 VPGFLQQVLGLSPKTD 94 >gi|218437715|ref|YP_002376044.1| polar amino acid ABC transporter inner membrane protein [Cyanothece sp. PCC 7424] gi|218170443|gb|ACK69176.1| polar amino acid ABC transporter, inner membrane subunit [Cyanothece sp. PCC 7424] Length = 402 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 73/233 (31%), Positives = 119/233 (51%), Gaps = 23/233 (9%) Query: 168 GMFLNNRGLSFPT---LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224 G+FL+ LS + LT+ V SF G++L+L R + L + YI Sbjct: 185 GLFLDLVPLSLISGLILTLSVAIVSIVLSFPFGVLLAL-----GRQSSLPVIRWLSIAYI 239 Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIA-LSCYTAAFIAE 283 LI G P LI + + P++ V P+ + IA + ++AA++AE Sbjct: 240 E--LIRGFP---LIGILFMAQVMLPLVLPLG------VRPDSIVRAIAGFTLFSAAYLAE 288 Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343 VR GL +VPRGQ EAA ALGL L++LPQA++++IP L Q+++L K++SL Sbjct: 289 NVRGGLQSVPRGQTEAAKALGLNPLLVLSLIVLPQALKAVIPTLVGQFISLFKDTSLLAI 348 Query: 344 VGFADLVSVGGTII---NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393 VG DL+ + +I+ G+ +E+ L F+Y ++L ++ K++ Sbjct: 349 VGLVDLLGISQSILANPKYQGRNVEVYLFIGFMYWLCCSAMSLASRKIETKMS 401 >gi|138897015|ref|YP_001127468.1| amino acid ABC transporter permease [Geobacillus thermodenitrificans NG80-2] gi|196249837|ref|ZP_03148533.1| polar amino acid ABC transporter, inner membrane subunit [Geobacillus sp. G11MC16] gi|134268528|gb|ABO68723.1| Amino acid ABC transporter (permease) [Geobacillus thermodenitrificans NG80-2] gi|196210713|gb|EDY05476.1| polar amino acid ABC transporter, inner membrane subunit [Geobacillus sp. G11MC16] Length = 218 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 41/115 (35%), Positives = 75/115 (65%) Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 +AA++AEI R+G+ ++ +GQMEAA +LG+TH +A R ++LPQA++ +IPP ++++ L+K Sbjct: 100 SAAYVAEIFRAGIQSIDKGQMEAARSLGMTHAQAMRYIILPQALKRMIPPFANEFIVLIK 159 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 +SSL + + +++ G + + E L FIYL L++ ++ + L K Sbjct: 160 DSSLGMIIAAPEIMYWGKAAAGEYYRVWEPYLTVAFIYLILTLSLSKLSHYLERK 214 >gi|325685296|gb|EGD27410.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus delbrueckii subsp. lactis DSM 20072] Length = 527 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 45/126 (35%), Positives = 78/126 (61%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I +S T A++AE++R G+I+ P+GQ EAA ALG+TH + ++LPQA+R+ +P +T++ Sbjct: 384 IIVSINTGAYLAEVIRGGIISTPKGQFEAASALGMTHNQRMWSIILPQAIRNCLPSITNE 443 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++ +K++S+ + ++L VG TI +Q+ Q + L+ IYL L+ I N + Sbjct: 444 FIVNIKDTSVLSIISVSELFFVGSTIASQSFQFFQTYLVISVIYLFLTFTITRIFNLIEK 503 Query: 391 KIALKE 396 I E Sbjct: 504 HIEGPE 509 >gi|291618614|ref|YP_003521356.1| YecS [Pantoea ananatis LMG 20103] gi|291153644|gb|ADD78228.1| YecS [Pantoea ananatis LMG 20103] gi|327394994|dbj|BAK12416.1| inner membrane amino-acid ABC transporter permease protein YecS [Pantoea ananatis AJ13355] Length = 214 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 40/99 (40%), Positives = 64/99 (64%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + + LS Y A+IAEI R G+ AVP+GQ E + LGL+ R+ V+LPQ ++P Sbjct: 85 FAAGILGLSIYQGAYIAEIFRGGIEAVPKGQWEVSWILGLSRRQTFTSVILPQTRGIVLP 144 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364 PL QYL+L+K++S+ +G ++L+ G I+++ GQ + Sbjct: 145 PLVGQYLSLIKDTSIVSMIGMSELMHQGQAIVDRIGQPV 183 >gi|271966876|ref|YP_003341072.1| polar amino acid ABC transporter inner membrane protein [Streptosporangium roseum DSM 43021] gi|270510051|gb|ACZ88329.1| polar amino acid ABC transporter, inner membrane subunit [Streptosporangium roseum DSM 43021] Length = 304 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 48/133 (36%), Positives = 82/133 (61%), Gaps = 3/133 (2%) Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305 FD P L ++ ++P F + + L+ A++AEIVR+G+ +V GQ EAA ALG+ Sbjct: 138 FDGPKLIEWQ--ANELITP-FTAALLGLAINEGAYMAEIVRAGIRSVDPGQREAAEALGM 194 Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365 +HR+ R V+LPQAMR IIPP +Q++++LK +S+ + A+L++V I + I Sbjct: 195 SHRQVLRRVVLPQAMRVIIPPTGNQFISMLKTTSMVSVIAGAELLTVSQRIYLGNFEVIA 254 Query: 366 IILIWMFIYLSLS 378 ++++ Y+ L+ Sbjct: 255 MLIVASIWYIVLT 267 >gi|163745604|ref|ZP_02152964.1| ABC transporter permease protein [Oceanibulbus indolifex HEL-45] gi|161382422|gb|EDQ06831.1| ABC transporter permease protein [Oceanibulbus indolifex HEL-45] Length = 223 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 61/161 (37%), Positives = 86/161 (53%), Gaps = 20/161 (12%) Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV-LIALKYQLHFDKPV 250 F +LG+++ L R + K + L +LY F +P LV LI + Y L F Sbjct: 37 FGGILGVLVCLV-----RLYAAKPFRLLAVLYTDIFR--AIPVLVVLILVYYALPF---- 85 Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 V F++ IAL+ AA+ AE+VR+G+ AVPRGQ EA ALGL+ Sbjct: 86 --------AGIVFSSFVAATIALALVLAAYTAEVVRAGIEAVPRGQFEACDALGLSFATT 137 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 R V+LPQA R +IPPL S + ++K++SLA V DL+ Sbjct: 138 MRKVILPQAFRMMIPPLASYAVAIMKDTSLASVVAMDDLLK 178 Score = 40.0 bits (92), Expect = 0.73, Method: Compositional matrix adjust. Identities = 24/61 (39%), Positives = 34/61 (55%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151 G VNT L FS + I+G LV RL A K + +Y ++FR IP LVV+ +Y + Sbjct: 23 GLVNTILLGFSAIFFGGILGVLVCLVRLYAAKPFRLLAVLYTDIFRAIPVLVVLILVYYA 82 Query: 152 V 152 + Sbjct: 83 L 83 >gi|315931225|gb|EFV10196.1| amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Campylobacter jejuni subsp. jejuni 327] Length = 259 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 60/175 (34%), Positives = 97/175 (55%), Gaps = 16/175 (9%) Query: 221 LLYISTF---LIFGLPTLVLIALKYQLHFDKPVLGQFN-FIGGSTVSPEFMSLYIALSCY 276 L ++STF LI G P LV + L Y + + LG N ++ G I LSC+ Sbjct: 94 LRFLSTFYIELIRGTPLLVQVLLMYYIIANN--LGLDNRYVAG----------VIILSCF 141 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 +AA++AEI R+G++++ Q+E+A ALGL + V+ PQA+++I+ PL+ Q+ NL+K Sbjct: 142 SAAYLAEIFRAGILSISISQLESARALGLKEMQVFAYVIFPQALKNILAPLSGQFANLIK 201 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 +SSL + +L I + T +E +I YL L++ I++F L K Sbjct: 202 DSSLLSVIAVNELTQSAQEINSYTFATLEAYVILAITYLILTLPISIFSRYLERK 256 Score = 36.6 bits (83), Expect = 6.7, Method: Compositional matrix adjust. Identities = 21/82 (25%), Positives = 41/82 (50%) Query: 68 AGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAW 127 F I ++ ++Y L GF+NT ++F ++ + I+G + A LS+ + + Sbjct: 37 CSFSISAYHFDFSVIATYKEKFLQGFLNTLIISFFSLLLSIILGGVFCAFSLSSIVFLRF 96 Query: 128 ICRVYVEVFRNIPPLVVIFFLY 149 + Y+E+ R P LV + +Y Sbjct: 97 LSTFYIELIRGTPLLVQVLLMY 118 >gi|304405143|ref|ZP_07386803.1| polar amino acid ABC transporter, inner membrane subunit [Paenibacillus curdlanolyticus YK9] gi|304346022|gb|EFM11856.1| polar amino acid ABC transporter, inner membrane subunit [Paenibacillus curdlanolyticus YK9] Length = 495 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 60/205 (29%), Positives = 106/205 (51%), Gaps = 23/205 (11%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF---LIFGLPTLVLIALKYQLHFD 247 + FV G +LSLF K PL + +T + G P L+ + + +++ Sbjct: 307 LLGFVWGSILSLF----------KISSVRPLQWFATVYTSVFRGTPLLLQL---FIIYYA 353 Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307 P L ++ P ++ +A +AA+++E +R G++AV RGQ EAA+ALG+ + Sbjct: 354 TPQLFDYDI-------PALLAAGLAFGLNSAAYLSETIRGGIMAVDRGQREAAMALGIPY 406 Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367 R R ++LPQA+++I+P L ++ + LLK SSL +G DL+ + T +A E + Sbjct: 407 RTMMRSIILPQAVKNILPALVNECVALLKESSLVSVIGVQDLMRRANVVQASTFRAFEAL 466 Query: 368 LIWMFIYLSLSIMIALFMNRLNAKI 392 L IY L +++ + L ++ Sbjct: 467 LFAGAIYYCLVLILTSLAHLLERRL 491 >gi|302554086|ref|ZP_07306428.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Streptomyces viridochromogenes DSM 40736] gi|302471704|gb|EFL34797.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Streptomyces viridochromogenes DSM 40736] Length = 315 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 42/113 (37%), Positives = 70/113 (61%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F++ + L AA++AEI R+GL++V GQ EA+ ALG++H K R +++PQAMR I+P Sbjct: 155 FLTALLGLGLNEAAYMAEICRAGLLSVDEGQTEASHALGMSHAKTLRRIVIPQAMRVIVP 214 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378 P ++ +N+LK +SL V + +L+ I +G E++ + YL L+ Sbjct: 215 PTGNEVINMLKTTSLVSVVQYPELLRAAQDIGQTSGAPAEMLFLAASWYLLLT 267 >gi|182418113|ref|ZP_02949413.1| glutamine ABC transporter, permease/substrate-binding protein [Clostridium butyricum 5521] gi|237666123|ref|ZP_04526110.1| polar amino acid ABC transporter, inner membrane subunit [Clostridium butyricum E4 str. BoNT E BL5262] gi|182377931|gb|EDT75471.1| glutamine ABC transporter, permease/substrate-binding protein [Clostridium butyricum 5521] gi|237658213|gb|EEP55766.1| polar amino acid ABC transporter, inner membrane subunit [Clostridium butyricum E4 str. BoNT E BL5262] Length = 219 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 39/111 (35%), Positives = 75/111 (67%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P+ + IALS ++A+++EI+R+G+ AV +GQMEAA +LG+ ++A V++PQA ++I Sbjct: 85 PDMATGIIALSLNSSAYVSEIIRAGIEAVDKGQMEAARSLGMNQKQAMFEVVIPQAFKNI 144 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374 +P L +++++++K SS+ +G A+L+ G + T +E +++ IY Sbjct: 145 LPALGNEFISVIKESSMVSVIGVAELMYNAGIVRGNTALGLEPVVVAAIIY 195 >gi|86151036|ref|ZP_01069252.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Campylobacter jejuni subsp. jejuni 260.94] gi|86153144|ref|ZP_01071349.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Campylobacter jejuni subsp. jejuni HB93-13] gi|121612505|ref|YP_001000623.1| His/Glu/Gln/Arg/opine ABC transporter permease [Campylobacter jejuni subsp. jejuni 81-176] gi|167005552|ref|ZP_02271310.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Campylobacter jejuni subsp. jejuni 81-176] gi|85842206|gb|EAQ59452.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Campylobacter jejuni subsp. jejuni 260.94] gi|85844029|gb|EAQ61239.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Campylobacter jejuni subsp. jejuni HB93-13] gi|87248894|gb|EAQ71857.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Campylobacter jejuni subsp. jejuni 81-176] Length = 261 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 60/175 (34%), Positives = 97/175 (55%), Gaps = 16/175 (9%) Query: 221 LLYISTF---LIFGLPTLVLIALKYQLHFDKPVLGQFN-FIGGSTVSPEFMSLYIALSCY 276 L ++STF LI G P LV + L Y + + LG N ++ G I LSC+ Sbjct: 96 LRFLSTFYIELIRGTPLLVQVLLMYYIIANN--LGLDNRYVAG----------VIILSCF 143 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 +AA++AEI R+G++++ Q+E+A ALGL + V+ PQA+++I+ PL+ Q+ NL+K Sbjct: 144 SAAYLAEIFRAGILSISISQLESARALGLKEMQVFAYVIFPQALKNILAPLSGQFANLIK 203 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 +SSL + +L I + T +E +I YL L++ I++F L K Sbjct: 204 DSSLLSVIAVNELTQSAQEINSYTFATLEAYVILAITYLILTLPISIFSRYLERK 258 Score = 37.7 bits (86), Expect = 2.9, Method: Compositional matrix adjust. Identities = 21/82 (25%), Positives = 42/82 (51%) Query: 68 AGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAW 127 F I +++ ++Y L GF+NT ++F ++ + I+G + A LS+ + + Sbjct: 39 CSFSISAYHFDFSAIATYKEKFLQGFLNTLIISFFSLLLSIILGGVFCAFSLSSIVFLRF 98 Query: 128 ICRVYVEVFRNIPPLVVIFFLY 149 + Y+E+ R P LV + +Y Sbjct: 99 LSTFYIELIRGTPLLVQVLLMY 120 >gi|300692510|ref|YP_003753505.1| glutamate/aspartate transport protein; ABC superfamily, membrane component [Ralstonia solanacearum PSI07] gi|299079570|emb|CBJ52248.1| glutamate/aspartate transport protein; ABC superfamily, membrane component [Ralstonia solanacearum PSI07] Length = 227 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 44/125 (35%), Positives = 77/125 (61%) Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327 S +A + + AA+ +EI+R+G+ +V RGQM A+ ALG+T+ +A RLV+LPQA R++IP L Sbjct: 101 SALVAFALFEAAYYSEIIRAGIQSVSRGQMFASYALGMTYGQAMRLVILPQAFRNMIPLL 160 Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387 +Q + L +++SL +D + I + G+ +E++L IY + ++ + R Sbjct: 161 LTQAIILFQDTSLVYVSALSDFFTQAYNIGERDGRIVELLLFAGLIYFVICFGASVLVKR 220 Query: 388 LNAKI 392 L K+ Sbjct: 221 LQKKV 225 >gi|121608198|ref|YP_996005.1| polar amino acid ABC transporter inner membrane subunit [Verminephrobacter eiseniae EF01-2] gi|121552838|gb|ABM56987.1| polar amino acid ABC transporter, inner membrane subunit [Verminephrobacter eiseniae EF01-2] Length = 222 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 49/136 (36%), Positives = 82/136 (60%), Gaps = 1/136 (0%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G + E +S I + AA+ +EI+R+G+ A+PRGQ+ A ALG+T+ + +LVLLPQ Sbjct: 86 GRPIGAE-VSAVITFIAFEAAYFSEIMRAGIAAIPRGQVHAGQALGMTYAQNMQLVLLPQ 144 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378 A+R+++P L +Q + L +++SL A+G DL+ G+ IE L +Y +L Sbjct: 145 ALRNMLPVLLTQIIILFQDTSLVYAIGAYDLLKGFELAGKNFGRPIEAYLAATVLYFALC 204 Query: 379 IMIALFMNRLNAKIAL 394 ++ + RL+ KIA+ Sbjct: 205 FTLSWLVKRLHRKIAI 220 >gi|149004460|ref|ZP_01829185.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP14-BS69] gi|225861279|ref|YP_002742788.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae Taiwan19F-14] gi|147757608|gb|EDK64628.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP14-BS69] gi|225727024|gb|ACO22875.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae Taiwan19F-14] gi|332076102|gb|EGI86568.1| amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Streptococcus pneumoniae GA41301] Length = 209 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 60/210 (28%), Positives = 118/210 (56%), Gaps = 21/210 (10%) Query: 195 VLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF---GLPTLVLIALKYQL-HFDKPV 250 +LG+VL+ F +++ K PL++++ ++ G P +V I + + L H + P Sbjct: 15 ILGVVLA---------FGQRS-KFKPLVWLANLYVWIFRGTPMMVQIMIAFALMHINAPT 64 Query: 251 LGQFNFIGG--STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308 + Q +G S + P + +S + A+++E VR+G+ AVP+GQ+EAA +LG+ + Sbjct: 65 I-QIGILGVDFSRLIPGIL----IISMNSGAYVSETVRAGINAVPKGQLEAAYSLGIRPK 119 Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368 A R V+LPQA+++I+P L ++++ ++K+SSL A+G +L + T+ T + +L Sbjct: 120 NAMRYVILPQAVKNILPALGNEFITIIKDSSLLSAIGVMELWNGATTVSTTTYLPLTPLL 179 Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 F YL ++ ++ + + + +KK Sbjct: 180 FAAFYYLIMTSILTVALKAFEKHMGQGDKK 209 >gi|186471432|ref|YP_001862750.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia phymatum STM815] gi|184197741|gb|ACC75704.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia phymatum STM815] Length = 215 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 40/101 (39%), Positives = 66/101 (65%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + + LS Y A+IAE+ RSG+ AVP+GQ E + LGL + V+LPQ + ++P Sbjct: 86 FAAGVVGLSVYQGAYIAEVFRSGIEAVPKGQWEVSQILGLGKMQTFFSVVLPQTGKIVLP 145 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 PL QYL+L+K++S+ +G ++L+ G I+++ G+ +EI Sbjct: 146 PLIGQYLSLIKDTSIVSMIGMSELMHGGQAIVDRVGKPVEI 186 >gi|148986052|ref|ZP_01819073.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP3-BS71] gi|147921886|gb|EDK73012.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP3-BS71] Length = 227 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 59/210 (28%), Positives = 115/210 (54%), Gaps = 21/210 (10%) Query: 195 VLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF---GLPTLVLIALKYQL-HFDKPV 250 +LG+VL+ + K PL++++ ++ G P +V I + + L H + P Sbjct: 33 ILGVVLAF----------GQCSKFKPLVWLANLYVWIFRGTPMMVQIMIAFALMHINAPT 82 Query: 251 LGQFNFIGG--STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308 + Q +G S + P + +S + A+++E VR+G+ AVP+GQ+EAA +LG+ + Sbjct: 83 I-QIGILGVDFSRLIPGIL----IISMNSGAYVSETVRAGINAVPKGQLEAAYSLGIRPK 137 Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368 A R V+LPQA+++I+P L ++++ ++K+SSL A+G +L + T+ T + +L Sbjct: 138 NAMRYVILPQAVKNILPALGNEFITIIKDSSLLSAIGVMELWNGATTVSTTTYLPLTPLL 197 Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 F YL ++ ++ + + + +KK Sbjct: 198 FAAFYYLIMTSILTVALKAFEKHMGQGDKK 227 >gi|149007236|ref|ZP_01830900.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP18-BS74] gi|221231612|ref|YP_002510764.1| putative amino acid ABC transporter permease protein [Streptococcus pneumoniae ATCC 700669] gi|225854330|ref|YP_002735842.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae JJA] gi|298230612|ref|ZP_06964293.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae str. Canada MDR_19F] gi|298254377|ref|ZP_06977963.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae str. Canada MDR_19A] gi|298503171|ref|YP_003725111.1| amino acid ABC superfamily transporter permease [Streptococcus pneumoniae TCH8431/19A] gi|147761274|gb|EDK68241.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP18-BS74] gi|220674072|emb|CAR68587.1| putative amino acid ABC transporter permease protein [Streptococcus pneumoniae ATCC 700669] gi|225723507|gb|ACO19360.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae JJA] gi|298238766|gb|ADI69897.1| amino acid ABC superfamily ATP binding cassette transporter, permease protein [Streptococcus pneumoniae TCH8431/19A] Length = 227 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 61/210 (29%), Positives = 116/210 (55%), Gaps = 21/210 (10%) Query: 195 VLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF---GLPTLVLIALKYQL-HFDKPV 250 +LG+VL+ F R K PL++++ ++ G P +V I + + L H + P Sbjct: 33 ILGVVLA-FGQR---------SKFKPLVWLANLYVWIFRGTPMMVQIMIAFALMHINAPT 82 Query: 251 LGQFNFIGG--STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308 + Q +G S + P + +S + A+++E VR+G+ AVP+GQ+EAA +LG+ + Sbjct: 83 I-QIGILGVDFSRLIPGIL----IISMNSGAYVSETVRAGINAVPKGQLEAAYSLGIRLK 137 Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368 A R V+LPQA+++I+P L ++++ ++K+SSL A+G +L + T+ T + +L Sbjct: 138 NAMRYVILPQAVKNILPALGNEFITIIKDSSLLSAIGVMELWNGATTVSTTTYLPLTPLL 197 Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 F YL ++ ++ + + + +KK Sbjct: 198 FAAFYYLIMTSILTVALKAFEKHMGQGDKK 227 >gi|315644842|ref|ZP_07897971.1| polar amino acid ABC transporter, inner membrane subunit [Paenibacillus vortex V453] gi|315279784|gb|EFU43085.1| polar amino acid ABC transporter, inner membrane subunit [Paenibacillus vortex V453] Length = 216 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 40/87 (45%), Positives = 63/87 (72%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P F + + LS + A IAEIVRSGL++V +GQ+EAA A GL++ + R V+LP A+R + Sbjct: 86 PTFWAAVVGLSIFEGAMIAEIVRSGLVSVDKGQIEAARASGLSYMQTLRHVILPLALRRM 145 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLV 350 PP+ SQ+++L+K++SLAV + +L+ Sbjct: 146 SPPMVSQFISLIKDTSLAVIISLPELM 172 >gi|291456221|ref|ZP_06595611.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Bifidobacterium breve DSM 20213] gi|291381498|gb|EFE89016.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Bifidobacterium breve DSM 20213] Length = 327 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 52/139 (37%), Positives = 82/139 (58%), Gaps = 1/139 (0%) Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312 +F I + V F + +I L+ AA+++EIVR+GL AV GQ EAA ALG+ R Sbjct: 144 EFWSIDSNVVVTAFNAAWIGLALNEAAYLSEIVRAGLEAVDPGQTEAAKALGMNRTLIMR 203 Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA-DLVSVGGTIINQTGQAIEIILIWM 371 ++LPQAMR IIPP ++ + +LK +SL AV F +L I N+ + I ++++ Sbjct: 204 RIVLPQAMRIIIPPTGNETIGMLKTTSLVTAVPFTLELQFATNAIANRIYKPIPLLIVAC 263 Query: 372 FIYLSLSIMIALFMNRLNA 390 F YL ++ ++ + +RL A Sbjct: 264 FWYLLITSILMVCQSRLEA 282 >gi|160938084|ref|ZP_02085441.1| hypothetical protein CLOBOL_02979 [Clostridium bolteae ATCC BAA-613] gi|158439078|gb|EDP16833.1| hypothetical protein CLOBOL_02979 [Clostridium bolteae ATCC BAA-613] Length = 226 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 60/187 (32%), Positives = 102/187 (54%), Gaps = 24/187 (12%) Query: 195 VLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248 VLG++ LF +L + + PLL +++G+ +++ K Sbjct: 34 VLGVIFGLFKVSDFKVLKLVADVYIDIIRGTPLLVQVMIMMYGVGSVL-----------K 82 Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308 P Q++ IGG+ F + +ALS A++AEI+R G+ AV +GQMEAA +LGL++ Sbjct: 83 PYGFQWSNIGGA-----FTAGCVALSLNAGAYMAEIIRGGIEAVDKGQMEAARSLGLSYG 137 Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368 KA R V+LPQA R+++P + +Q++ LK++SL +G +L G I + A ++ Sbjct: 138 KAMRKVILPQAFRTMLPSIINQFIISLKDTSLVSVIGPRELTQNGKIIAANS--ASMVMP 195 Query: 369 IWMFIYL 375 IW+ + L Sbjct: 196 IWICVAL 202 >gi|157693109|ref|YP_001487571.1| amino acid ABC transporter ATP-binding protein [Bacillus pumilus SAFR-032] gi|157681867|gb|ABV63011.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Bacillus pumilus SAFR-032] Length = 237 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 68/191 (35%), Positives = 104/191 (54%), Gaps = 10/191 (5%) Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLV-LIALKYQLHFDKPVLGQFNFIGGSTVSPEFM 267 R F + L LY+S F G P +V L A Y L F VL + + G T P+ + Sbjct: 45 RLFRIPVLRQLVTLYVSFFR--GTPLIVQLFAFFYGLPF---VLTKMSDTFGLTFHPDMV 99 Query: 268 S-LYIAL---SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 S L +AL S ++AA + E+VRS L+AV +GQ+EAA +G+T R+A ++LPQA Sbjct: 100 SPLAVALMTFSLHSAAHLTEVVRSALLAVDKGQLEAAKIVGMTTRQAMMRIILPQAFVVA 159 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 +P L +Q + LLK +SL+ +G +++ + I N Q +E L+ IY LSI L Sbjct: 160 LPNLGNQLIQLLKATSLSFTIGVLEIMGISRIIANDGYQFLETYLVSALIYWLLSIFFEL 219 Query: 384 FMNRLNAKIAL 394 L ++++ Sbjct: 220 AFALLEKRVSV 230 >gi|330954816|gb|EGH55076.1| amino acid ABC transporter permease [Pseudomonas syringae Cit 7] Length = 229 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 66/191 (34%), Positives = 102/191 (53%), Gaps = 17/191 (8%) Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239 TLT++ A + +L I + + R SRH+ + ALP YI F G P LV + Sbjct: 18 TLTLELVAIAVIAGLILAIPMGI--ARASRHWPVR---ALPYAYI--FFFRGTPLLVQLF 70 Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295 L Y L QF + S + P F + ++ +TAA+IAEI+R + AVP G Sbjct: 71 LVYY------GLAQFESVRQSALWPYLRDPFWCAVVTMTLHTAAYIAEILRGAMQAVPPG 124 Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355 ++EAA ALG++ KA ++LP+A R +P +++ + +LK S+LA V +L + T Sbjct: 125 EIEAARALGMSKWKALFYIVLPRAARIGLPAYSNEVILMLKASALASTVTLLELTGMART 184 Query: 356 IINQTGQAIEI 366 II +T +EI Sbjct: 185 IIARTYLPVEI 195 >gi|319780744|ref|YP_004140220.1| polar amino acid ABC transporter inner membrane subunit [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317166632|gb|ADV10170.1| polar amino acid ABC transporter, inner membrane subunit [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 269 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 45/109 (41%), Positives = 73/109 (66%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +AL+ +AFI+E+ R+G+ AV +GQ+EAA ALGLT + RL++ PQA+R+I+PPL + Sbjct: 142 MALTIGYSAFISEVFRAGIQAVEKGQIEAAKALGLTRAQRFRLIVFPQAIRTILPPLGND 201 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379 ++ L+K+SSL +G AD+ +G + + E I +IYL L++ Sbjct: 202 FVALVKDSSLVSVLGVADITQMGKVYAAGSFRFFETYSITAYIYLILTV 250 >gi|308187256|ref|YP_003931387.1| ABC transport system permease protein [Pantoea vagans C9-1] gi|308057766|gb|ADO09938.1| Putative ABC transport system permease protein [Pantoea vagans C9-1] Length = 222 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 64/207 (30%), Positives = 111/207 (53%), Gaps = 18/207 (8%) Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251 F +LG +L+L RLSR + + L +Y+S F G P LIA + +++ P Sbjct: 32 FGLLLGFILALM--RLSRFWPVRW---LARIYVSIFR--GTP---LIAQLFMIYYGLP-- 79 Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311 QF G + P S I LS TAA+ +E +R + ++ RGQ EAA ++G+T + Sbjct: 80 -QF----GIELDP-IPSAMIGLSLNTAAYASESLRGAIASIERGQWEAAASIGMTRWQTL 133 Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371 R V+LPQA R+ +PPL + +++L+K++SLA + +L I ++T + + L Sbjct: 134 RRVILPQAARTALPPLGNSFISLVKDTSLAATIQVPELFRQAQLITSRTLEVFTMYLAAS 193 Query: 372 FIYLSLSIMIALFMNRLNAKIALKEKK 398 IY ++ +++ NRL + ++ + Sbjct: 194 LIYWVMATVLSALQNRLEQHVNRQDSE 220 Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust. Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 8/89 (8%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G + T L+ GM ++G ++ RLS V W+ R+YV +FR P + +F + Sbjct: 15 LLKGALFTLQLSIGGMFFGLLLGFILALMRLSRFWPVRWLARIYVSIFRGTPLIAQLFMI 74 Query: 149 YKSV----LSVLPIPDHSIVLPFGMFLNN 173 Y + + + PIP I G+ LN Sbjct: 75 YYGLPQFGIELDPIPSAMI----GLSLNT 99 >gi|157415203|ref|YP_001482459.1| amino acid ABC transporter permease [Campylobacter jejuni subsp. jejuni 81116] gi|157386167|gb|ABV52482.1| putative glutamine transport system permease [Campylobacter jejuni subsp. jejuni 81116] gi|307747845|gb|ADN91115.1| Putative glutamine transport system permease [Campylobacter jejuni subsp. jejuni M1] Length = 261 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 60/175 (34%), Positives = 97/175 (55%), Gaps = 16/175 (9%) Query: 221 LLYISTF---LIFGLPTLVLIALKYQLHFDKPVLGQFN-FIGGSTVSPEFMSLYIALSCY 276 L ++STF LI G P LV + L Y + + LG N ++ G I LSC+ Sbjct: 96 LRFLSTFYIELIRGTPLLVQVLLMYYIIANN--LGLDNRYVAG----------VIILSCF 143 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 +AA++AEI R+G++++ Q+E+A ALGL + V+ PQA+++I+ PL+ Q+ NL+K Sbjct: 144 SAAYLAEIFRAGILSISISQLESARALGLKEMQVFAYVIFPQALKNILAPLSGQFANLIK 203 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 +SSL + +L I + T +E +I YL L++ I++F L K Sbjct: 204 DSSLLSVIAVNELTQSAQEINSYTFATLEAYVILAITYLILTLPISIFSRYLERK 258 Score = 36.6 bits (83), Expect = 6.6, Method: Compositional matrix adjust. Identities = 21/82 (25%), Positives = 41/82 (50%) Query: 68 AGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAW 127 F I ++ ++Y L GF+NT ++F ++ + I+G + A LS+ + + Sbjct: 39 CSFSISAYHFDFSVIATYKEKFLQGFLNTLIISFFSLLLSIILGGVFCAFSLSSIVFLRF 98 Query: 128 ICRVYVEVFRNIPPLVVIFFLY 149 + Y+E+ R P LV + +Y Sbjct: 99 LSTFYIELIRGTPLLVQVLLMY 120 >gi|329908118|ref|ZP_08274834.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Oxalobacteraceae bacterium IMCC9480] gi|327546759|gb|EGF31696.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Oxalobacteraceae bacterium IMCC9480] Length = 260 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 66/187 (35%), Positives = 102/187 (54%), Gaps = 18/187 (9%) Query: 195 VLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF---GLPTLVLIALKYQLHFDKPVL 251 V+GIVL + A K LPL + + F I+ G P LV + + L Sbjct: 70 VIGIVLGMLAA------LGKLSSFLPLRWAAGFYIWAIRGTPLLVQVLFVF--------L 115 Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311 + G +S +F S +AL+ A+ AE +RSG++AV +GQ EAA +LGL+ + Sbjct: 116 ALPALVPGLQLS-DFYSAVVALAFNAGAYNAEAIRSGILAVHKGQAEAARSLGLSPFQTF 174 Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371 R V+ PQ+MR +PPL + +++LLK+SSLA +G +L ++G I + T Q I + + Sbjct: 175 RDVVFPQSMRIALPPLVNNFVSLLKDSSLAYVIGVVELSNIGNRIQSVTFQPIPVFVTVA 234 Query: 372 FIYLSLS 378 IYL L+ Sbjct: 235 AIYLILT 241 >gi|224542318|ref|ZP_03682857.1| hypothetical protein CATMIT_01497 [Catenibacterium mitsuokai DSM 15897] gi|224524767|gb|EEF93872.1| hypothetical protein CATMIT_01497 [Catenibacterium mitsuokai DSM 15897] Length = 229 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 60/213 (28%), Positives = 105/213 (49%), Gaps = 27/213 (12%) Query: 192 FSFVLGIVLSLFATRLSRHF--------HEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243 F +LGI+ + A +LS+HF + + + P+L FL +PT+V + Sbjct: 36 FGVILGIIGA--ALKLSKHFVLRAIGNVYVEIFRGTPMLLQIMFLYLAVPTVVQSITGQR 93 Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 D V G IA+S + A+ E++RSG++ V +GQ EA + Sbjct: 94 FQADPYVCG-----------------LIAMSLNSGAYQVELIRSGILGVDKGQWEACETI 136 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363 GL + + R V+LPQA + IIPPL S+++ L+K+SSL +G +L++ I T Sbjct: 137 GLNYVQTMRYVILPQAFKRIIPPLISEFITLIKDSSLIFTIGAVELLATASVIGANTFNY 196 Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 + + IYL +++ I+ + ++A+ + Sbjct: 197 LVPLTATGAIYLVMTLCISAIARYVEGRLAVSD 229 Score = 36.6 bits (83), Expect = 8.1, Method: Compositional matrix adjust. Identities = 24/68 (35%), Positives = 37/68 (54%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 I G + LA + I+G + A +LS + ++ I VYVE+FR P L+ I FL Sbjct: 19 IFTGAKYSLLLAIGALFFGVILGIIGAALKLSKHFVLRAIGNVYVEIFRGTPMLLQIMFL 78 Query: 149 YKSVLSVL 156 Y +V +V+ Sbjct: 79 YLAVPTVV 86 >gi|66048138|ref|YP_237979.1| amino acid ABC transporter permease [Pseudomonas syringae pv. syringae B728a] gi|63258845|gb|AAY39941.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Pseudomonas syringae pv. syringae B728a] gi|330900968|gb|EGH32387.1| amino acid ABC transporter permease [Pseudomonas syringae pv. japonica str. M301072PT] gi|330939296|gb|EGH42691.1| amino acid ABC transporter permease [Pseudomonas syringae pv. pisi str. 1704B] gi|330970704|gb|EGH70770.1| amino acid ABC transporter permease [Pseudomonas syringae pv. aceris str. M302273PT] gi|330980615|gb|EGH78718.1| amino acid ABC transporter permease [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 229 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 66/191 (34%), Positives = 102/191 (53%), Gaps = 17/191 (8%) Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239 TLT++ A + +L I + + R SRH+ + ALP YI F G P LV + Sbjct: 18 TLTLELVAIAVIAGLILAIPMGI--ARASRHWPVR---ALPYAYI--FFFRGTPLLVQLF 70 Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295 L Y L QF + S + P F + ++ +TAA+IAEI+R + AVP G Sbjct: 71 LVYY------GLAQFESVRQSALWPYLRDPFWCAVVTMTLHTAAYIAEILRGAMQAVPPG 124 Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355 ++EAA ALG++ KA ++LP+A R +P +++ + +LK S+LA V +L + T Sbjct: 125 EVEAARALGMSKWKALFYIVLPRAARIGLPAYSNEVILMLKASALASTVTLLELTGMART 184 Query: 356 IINQTGQAIEI 366 II +T +EI Sbjct: 185 IIARTYLPVEI 195 >gi|282601295|ref|ZP_06257979.1| glutamine ABC transporter, glutamine-binding protein/permease protein [Subdoligranulum variabile DSM 15176] gi|282569527|gb|EFB75062.1| glutamine ABC transporter, glutamine-binding protein/permease protein [Subdoligranulum variabile DSM 15176] Length = 224 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 60/209 (28%), Positives = 117/209 (55%), Gaps = 28/209 (13%) Query: 192 FSFVLGIVLSLFATRLSRHFH------EKTGKALPLLYISTFLIFGLPTLVLIALKYQLH 245 F+ +LG++ L + +R + + +P++ ++ F+ FG+P L+ Sbjct: 29 FACILGLIFGLLSVVKNRACNIVSIIFVDAIRGVPMIVLAYFIYFGIPYLL--------- 79 Query: 246 FDKPVLGQFNFIGGSTVSP-EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304 +LG GG T++ + ++ +AL+C A++AEI+R+G+ +V +GQMEAA +LG Sbjct: 80 --NTILG----FGGVTLTALQAGTVCLALNC--GAYMAEIIRAGIESVDKGQMEAARSLG 131 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364 L + +A V+LPQA+R++IP + +Q++ LK++S+ +GF +LV+ ++ + + Sbjct: 132 LPYWRAMVRVVLPQAIRTMIPSIINQFIITLKDTSILSVIGFPELVNTAKNVVANSFMSF 191 Query: 365 EIILIWMFIYL----SLSIMIALFMNRLN 389 ++ I +YL LS++ RLN Sbjct: 192 QVWAIVAVMYLIVITILSVLAKQMERRLN 220 >gi|118469246|ref|YP_885991.1| polar amino acid ABC transporter inner membrane protein [Mycobacterium smegmatis str. MC2 155] gi|118170533|gb|ABK71429.1| ABC polar amino acid transporter, inner membrane subunit [Mycobacterium smegmatis str. MC2 155] Length = 263 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 54/177 (30%), Positives = 98/177 (55%), Gaps = 7/177 (3%) Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG--GSTVSPEFMSLYIALSCYTAAFIAEI 284 ++I G P LV + L Y L QF+ + G +V + I L +A+IAEI Sbjct: 64 WVIRGTPLLVQLVLIYT-GLAAAGLYQFHDVSLLGLSVKAALQAAIIGLMINESAYIAEI 122 Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344 +R+GL +VP+GQ EAA +LG+ K R +++PQA+R ++PP+ + + L+K +S+ + Sbjct: 123 IRAGLDSVPKGQFEAAASLGMKPAKVMRWIIVPQALRVMVPPMGNSFNGLMKTTSVLSVI 182 Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM----NRLNAKIALKEK 397 G +++ V +I + T EI ++ YL+L+ + NRL ++ ++++ Sbjct: 183 GVSEMFLVTQSISSATFHTFEIFIVAAIYYLALTTIWTFIQAGIENRLARQLGIEQR 239 >gi|71734098|ref|YP_274659.1| glutamine ABC transporter permease [Pseudomonas syringae pv. phaseolicola 1448A] gi|298486963|ref|ZP_07005016.1| glutamate/aspartate transport system permease protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|71554651|gb|AAZ33862.1| glutamine ABC transporter, permease protein [Pseudomonas syringae pv. phaseolicola 1448A] gi|298158525|gb|EFH99592.1| glutamate/aspartate transport system permease protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 233 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 54/148 (36%), Positives = 87/148 (58%), Gaps = 4/148 (2%) Query: 232 LPTLVLIALKYQLHFDKP-VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290 +PTLV + L Y F P +L + + + S E++ IAL AA+ +E +RSGL Sbjct: 69 VPTLVQLMLWY---FGIPTLLTESTQLWLANYSTEYLFSVIALGLCQAAYFSEDIRSGLR 125 Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 A+P GQ+EA+ ALGL + ++ R V+LPQ +R+ +P L + + L KN+SL +A+G +L Sbjct: 126 AIPAGQVEASRALGLGYVRSMRYVILPQGVRNCLPSLINHTVLLFKNTSLVMAIGVVELT 185 Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLS 378 + N T + E L+ +YL++S Sbjct: 186 YATREVENYTFRTFEAYLVATVVYLAIS 213 >gi|148240913|ref|YP_001220414.1| inner membrane amino-acid ABC transporter permease protein [Bradyrhizobium sp. BTAi1] gi|146411289|gb|ABQ39742.1| Inner membrane amino-acid ABC transporter permease protein [Bradyrhizobium sp. BTAi1] Length = 360 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 51/139 (36%), Positives = 80/139 (57%), Gaps = 3/139 (2%) Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315 F+ + + +F+ +AL+ + AA++AE++R GL A+PRGQ EAA ALGL + V+ Sbjct: 217 FLPEALLPDKFVRALVALTIFAAAYLAEVIRGGLQAIPRGQYEAAAALGLPFWRTQYRVI 276 Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG---QAIEIILIWMF 372 LPQA+R +IP L + + ++KN+SL + VG DL+S G + A E L Sbjct: 277 LPQAIRVVIPALANTIIVMIKNTSLVLVVGLFDLISSGKAALADPAWPSPAAETFLFIGG 336 Query: 373 IYLSLSIMIALFMNRLNAK 391 I+ +LS A F + L + Sbjct: 337 IFFALSFSFARFADFLERR 355 >gi|289646274|ref|ZP_06477617.1| glutamine ABC transporter, permease protein [Pseudomonas syringae pv. aesculi str. 2250] Length = 233 Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 54/148 (36%), Positives = 87/148 (58%), Gaps = 4/148 (2%) Query: 232 LPTLVLIALKYQLHFDKP-VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290 +PTLV + L Y F P +L + + + S E++ IAL AA+ +E +RSGL Sbjct: 69 VPTLVQLMLWY---FGIPTLLTESTQLWLANYSTEYLFSVIALGLCQAAYFSEDIRSGLR 125 Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 A+P GQ+EA+ ALGL + ++ R V+LPQ +R+ +P L + + L KN+SL +A+G +L Sbjct: 126 AIPAGQVEASRALGLGYVRSMRYVILPQGVRNCLPSLINHTVLLFKNTSLVMAIGVVELT 185 Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLS 378 + N T + E L+ +YL++S Sbjct: 186 YATREVENYTFRTFEAYLVATVVYLAIS 213 >gi|188534471|ref|YP_001908268.1| Glutamate/aspartate transport system permease [Erwinia tasmaniensis Et1/99] gi|188029513|emb|CAO97390.1| Glutamate/aspartate transport system permease [Erwinia tasmaniensis Et1/99] Length = 225 Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 43/127 (33%), Positives = 78/127 (61%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 +S +A S + AA+ +EI+R+G++++ RGQ AA+ALG+T ++ +L++LPQA R+++ Sbjct: 96 RLISAMVAFSLFEAAYYSEIIRAGILSIARGQGNAALALGMTRWQSMQLIILPQAFRAMV 155 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 P L +Q + L +++SL + AD TI G IE++L +Y +S+ +L Sbjct: 156 PLLLTQGIVLFQDTSLVYVLSLADFFRTADTIGVNNGTEIEMVLFAGAVYFVISLSASLL 215 Query: 385 MNRLNAK 391 ++ L K Sbjct: 216 VSYLKKK 222 Score = 44.3 bits (103), Expect = 0.036, Method: Compositional matrix adjust. Identities = 22/65 (33%), Positives = 40/65 (61%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151 G V T + F+ ++ I GT++ RLS+ K ++W ++YV +FR++P ++V+ + Y Sbjct: 19 GMVITLQITFTAIVFGIIWGTMLAVMRLSSFKPISWFAKIYVNLFRSVPLVMVLLWFYLV 78 Query: 152 VLSVL 156 V S L Sbjct: 79 VPSFL 83 >gi|170696122|ref|ZP_02887257.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia graminis C4D1M] gi|170138937|gb|EDT07130.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia graminis C4D1M] Length = 246 Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 61/177 (34%), Positives = 94/177 (53%), Gaps = 12/177 (6%) Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKAL--------PLLYISTFLIFGL 232 +T+ +A + V + +LG L++ R+++H T L PLL F FG Sbjct: 22 ITLILSACVSVCATLLGFGLAM--ARIAQHRAVATAAKLYVLVFRNSPLLVQLLFWYFGA 79 Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292 TL+ A + + P + S E + ++ L+CY+ AFIAE R+G+ V Sbjct: 80 ATLLPSA--WMTWLNTPHVLSAGPFALHWPSFELFAGWLGLTCYSTAFIAEEFRAGIRGV 137 Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349 Q +A+ ALG+T R V+LPQA+R PPL QY+N++KNSSL +A+G A+L Sbjct: 138 GIAQYQASAALGMTRYATLRHVVLPQAVRIATPPLAGQYMNIVKNSSLTMAIGVAEL 194 Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust. Identities = 25/76 (32%), Positives = 41/76 (53%) Query: 82 DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141 D Y + GF+ T L+ + AT++G + R++ ++ VA ++YV VFRN P Sbjct: 9 DPRYLGWLAHGFLITLILSACVSVCATLLGFGLAMARIAQHRAVATAAKLYVLVFRNSPL 68 Query: 142 LVVIFFLYKSVLSVLP 157 LV + F Y ++LP Sbjct: 69 LVQLLFWYFGAATLLP 84 >gi|228995974|ref|ZP_04155630.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus mycoides Rock3-17] gi|229003591|ref|ZP_04161407.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus mycoides Rock1-4] gi|228757633|gb|EEM06862.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus mycoides Rock1-4] gi|228763747|gb|EEM12638.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus mycoides Rock3-17] Length = 214 Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 43/94 (45%), Positives = 69/94 (73%), Gaps = 3/94 (3%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +AL+ + AA I+EIVRSGL+++ +GQ+EAA A GL++ + ++LPQA+R ++PPL SQ Sbjct: 93 VALTIFEAAMISEIVRSGLLSIEKGQIEAARASGLSYIQTLWHIILPQALRRMVPPLVSQ 152 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364 +++LLK++SLAV + +L+ IIN GQ + Sbjct: 153 FISLLKDTSLAVVISLPELMH-NAQIIN--GQNV 183 Score = 40.0 bits (92), Expect = 0.65, Method: Compositional matrix adjust. Identities = 24/71 (33%), Positives = 41/71 (57%), Gaps = 2/71 (2%) Query: 79 YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138 YT D + +L G + T +A ++ + IIG++VG R + +V+ + VE+ RN Sbjct: 7 YTGD--HVLFLLKGLLVTLEIAVVAILLSFIIGSIVGTLRYAKIPVVSQLLAFIVEIIRN 64 Query: 139 IPPLVVIFFLY 149 +P L++IFF Y Sbjct: 65 LPLLLIIFFTY 75 >gi|330811361|ref|YP_004355823.1| Putative ABC transporter, permease component [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327379469|gb|AEA70819.1| Putative ABC transporter, permease component [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 223 Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 59/220 (26%), Positives = 107/220 (48%), Gaps = 23/220 (10%) Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPT 234 +T+ A V +LG +L+L ++ G +++PLL + T+ +P Sbjct: 21 MTLKLMALGVVGGIILGTILALMRLSHNKLVSNLAGAYVNYFRSIPLLLVITWFYLAVP- 79 Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294 L++ D P+ F S +A + AA+ EIVR+G+ ++P+ Sbjct: 80 ---FVLRWITGEDTPI-------------GAFGSCIVAFMMFEAAYFCEIVRAGVQSIPK 123 Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354 GQM AA ALG+ + + RL++LPQA R + P L Q + L +++SL VG D ++ Sbjct: 124 GQMGAAQALGMNYGQTMRLIILPQAFRKMTPLLLQQSIILFQDTSLVYTVGLVDFLNASR 183 Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394 + G++ E ++I +Y ++S + + RL + A+ Sbjct: 184 ASGDIIGRSNEFLIIAGLVYFTVSFAASQLVKRLQKRFAV 223 Score = 42.7 bits (99), Expect = 0.098, Method: Compositional matrix adjust. Identities = 28/65 (43%), Positives = 39/65 (60%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151 G V T L G++ I+GT++ RLS NKLV+ + YV FR+IP L+VI + Y + Sbjct: 18 GMVMTLKLMALGVVGGIILGTILALMRLSHNKLVSNLAGAYVNYFRSIPLLLVITWFYLA 77 Query: 152 VLSVL 156 V VL Sbjct: 78 VPFVL 82 >gi|57237768|ref|YP_179016.1| His/Glu/Gln/Arg/opine ABC transporter permease [Campylobacter jejuni RM1221] gi|57166572|gb|AAW35351.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Campylobacter jejuni RM1221] gi|315058379|gb|ADT72708.1| Putative glutamine transport system permease [Campylobacter jejuni subsp. jejuni S3] Length = 261 Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 60/175 (34%), Positives = 97/175 (55%), Gaps = 16/175 (9%) Query: 221 LLYISTF---LIFGLPTLVLIALKYQLHFDKPVLGQFN-FIGGSTVSPEFMSLYIALSCY 276 L ++STF LI G P LV + L Y + + LG N ++ G I LSC+ Sbjct: 96 LRFLSTFYIELIRGTPLLVQVLLIYYIIANN--LGLDNRYVAG----------VIILSCF 143 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 +AA++AEI R+G++++ Q+E+A ALGL + V+ PQA+++I+ PL+ Q+ NL+K Sbjct: 144 SAAYLAEIFRAGILSISISQLESARALGLKEMQVFAYVIFPQALKNILAPLSGQFANLIK 203 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 +SSL + +L I + T +E +I YL L++ I++F L K Sbjct: 204 DSSLLSVIAVNELTQSAQEINSYTFATLEAYVILAITYLVLTLPISIFSRYLERK 258 Score = 37.0 bits (84), Expect = 5.0, Method: Compositional matrix adjust. Identities = 20/82 (24%), Positives = 42/82 (51%) Query: 68 AGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAW 127 F + +++ ++Y L GF+NT ++F ++ + I+G + A LS+ + + Sbjct: 39 CSFSVSAYHFDFSAIATYKEKFLQGFLNTLIISFFSLLLSIILGGVFCAFSLSSIVFLRF 98 Query: 128 ICRVYVEVFRNIPPLVVIFFLY 149 + Y+E+ R P LV + +Y Sbjct: 99 LSTFYIELIRGTPLLVQVLLIY 120 >gi|153951698|ref|YP_001398010.1| amino acid ABC transporter, permease protein PEB1 [Campylobacter jejuni subsp. doylei 269.97] gi|152939144|gb|ABS43885.1| amino acid ABC transporter, permease protein PEB1 [Campylobacter jejuni subsp. doylei 269.97] Length = 250 Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 40/122 (32%), Positives = 72/122 (59%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + + Y A+++E+VRSG++AVPRGQ EA+ + G T+ + R +++PQ +R I+PP+T+Q Sbjct: 122 LGVGAYHGAYVSEVVRSGILAVPRGQFEASASQGFTYIQQMRYIIVPQTIRIILPPMTNQ 181 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 +NL+KN+S+ + VG A+L+ + G + +Y + +A F Sbjct: 182 MVNLIKNTSVLLIVGGAELMHSADSYAADYGNYASAYIFAAVLYFIICYPLAYFAKAYEN 241 Query: 391 KI 392 K+ Sbjct: 242 KL 243 Score = 43.5 bits (101), Expect = 0.052, Method: Compositional matrix adjust. Identities = 23/62 (37%), Positives = 38/62 (61%) Query: 88 AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147 A + GF+ T ++ + ATI GT+ G S K++ R+YVE+F+N+P ++ IFF Sbjct: 43 AFINGFIYTLEVSILALFIATIFGTIGGVMATSRFKIIRAYTRIYVELFQNVPLVIQIFF 102 Query: 148 LY 149 L+ Sbjct: 103 LF 104 >gi|311107044|ref|YP_003979897.1| amino ABC transporter permease, 3-TM region, His/Glu/Gln/Arg/opine family domain-containing protein 13 [Achromobacter xylosoxidans A8] gi|310761733|gb|ADP17182.1| amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family domain protein 13 [Achromobacter xylosoxidans A8] Length = 251 Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 46/127 (36%), Positives = 78/127 (61%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + +A+ Y +A I E +R+G+ A+P+GQ A +ALGLT + R VLLP A+R+++P Sbjct: 108 FYTAALAIGMYMSARIGEQLRAGIEALPQGQRNAGLALGLTLPQLYRHVLLPNALRTVLP 167 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 +TS LN +KN+S+A+ +G A+L + + + Q E L YL+L++++ + M Sbjct: 168 TMTSDCLNTIKNTSVALTIGLAELTAQAHAMQEFSFQVFEAFLTATMAYLALNLIVIVVM 227 Query: 386 NRLNAKI 392 L K+ Sbjct: 228 RALEYKL 234 Score = 37.7 bits (86), Expect = 3.0, Method: Compositional matrix adjust. Identities = 25/73 (34%), Positives = 37/73 (50%), Gaps = 12/73 (16%) Query: 114 VGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLP---------IPD---H 161 VG R ++ V VYVEVFRNIP +V +F Y + +LP +PD + Sbjct: 50 VGVARTLPSRGVRAAAAVYVEVFRNIPLIVQMFLWYFVLPELLPTAAGDWIKQLPDASFY 109 Query: 162 SIVLPFGMFLNNR 174 + L GM+++ R Sbjct: 110 TAALAIGMYMSAR 122 >gi|257469870|ref|ZP_05633962.1| amino acid ABC transporter permease [Fusobacterium ulcerans ATCC 49185] gi|317064099|ref|ZP_07928584.1| amino acid transport system permease [Fusobacterium ulcerans ATCC 49185] gi|313689775|gb|EFS26610.1| amino acid transport system permease [Fusobacterium ulcerans ATCC 49185] Length = 236 Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 45/147 (30%), Positives = 85/147 (57%) Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309 +L F+G +P + ++ + A++AEI+R+G+ + +GQMEAA ALG+ + Sbjct: 90 ILANLIFVGALRDTPILVIAGLSFGINSGAYVAEIIRAGIEGLDKGQMEAARALGMPYGI 149 Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369 A + +++PQA++ I+P L S+++ LLK +S+ +G DL+ I +QT + +E +L Sbjct: 150 AMKEIIIPQAIKKILPALVSEFITLLKETSIVGFIGGVDLLRSANIITSQTYRGVEPLLA 209 Query: 370 WMFIYLSLSIMIALFMNRLNAKIALKE 396 IYL L+ + FM + + + + Sbjct: 210 VGLIYLILTAVFTKFMRGIEKGLKVSD 236 >gi|157693149|ref|YP_001487611.1| glutamine ABC transporter membrane protein [Bacillus pumilus SAFR-032] gi|157681907|gb|ABV63051.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Bacillus pumilus SAFR-032] Length = 216 Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 53/167 (31%), Positives = 98/167 (58%), Gaps = 14/167 (8%) Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288 I LP L++I Y F P +G I S ++ AL+ + +A ++EI+RSG Sbjct: 62 IRNLPLLLIIFFTY---FALPEIGIKLSITASAIA--------ALTVFESAMLSEIIRSG 110 Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348 L ++ +GQ+EAA + G T+ + +++++PQA+R ++PP+ SQ+++LLK++SLAV + + Sbjct: 111 LKSIDKGQIEAARSSGFTYIQTLKMIIMPQALRRMVPPIVSQFISLLKDTSLAVVIALPE 170 Query: 349 LVSVGGTIINQTGQA--IEIILIWMFIYLSLSIMIALFMNRLNAKIA 393 L+ I+N Q+ + I L+ +Y ++ ++L RL + A Sbjct: 171 LLH-HAQILNGQSQSYLLPIFLLAAMMYFVVNFSLSLLARRLEYRQA 216 Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust. Identities = 23/61 (37%), Positives = 37/61 (60%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L GF T +AF +I + +IG ++G R + +++ I V VE RN+P L++IFF Sbjct: 15 LLEGFAVTLKVAFISIILSFLIGLVIGTLRFAQIPILSKILAVVVETIRNLPLLLIIFFT 74 Query: 149 Y 149 Y Sbjct: 75 Y 75 >gi|89897021|ref|YP_520508.1| hypothetical protein DSY4275 [Desulfitobacterium hafniense Y51] gi|219667106|ref|YP_002457541.1| polar amino acid ABC transporter inner membrane subunit [Desulfitobacterium hafniense DCB-2] gi|89336469|dbj|BAE86064.1| hypothetical protein [Desulfitobacterium hafniense Y51] gi|219537366|gb|ACL19105.1| polar amino acid ABC transporter, inner membrane subunit [Desulfitobacterium hafniense DCB-2] Length = 215 Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 41/106 (38%), Positives = 71/106 (66%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +A++ +T+A IAE+VR GL ++ +GQ EAA + GL++ + R ++LPQA+R +IPPL SQ Sbjct: 86 LAMTVFTSAIIAEVVRGGLNSIDKGQWEAAKSQGLSYVQILRYIILPQALRKMIPPLVSQ 145 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376 ++ ++K++S AVG +L G I+ Q G ++ ++ I L+ Sbjct: 146 FITVVKDTSYVWAVGIEELTGKGLIIMGQFGSTPQVFTLFGMIALT 191 Score = 40.8 bits (94), Expect = 0.42, Method: Compositional matrix adjust. Identities = 19/54 (35%), Positives = 35/54 (64%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145 G + T ++A ++ + ++GT++G R S N ++A + +Y+EV RNIP L+ I Sbjct: 16 GLMTTLYIAGMTIVLSFVVGTILGIARYSKNPILAPLAAIYIEVVRNIPLLLFI 69 >gi|330427593|gb|AEC18927.1| polar amino acid ABC transporter, inner membrane subunit [Pusillimonas sp. T7-7] Length = 217 Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 65/206 (31%), Positives = 107/206 (51%), Gaps = 18/206 (8%) Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249 FV ++G++++L SR K +AL + +I F G P L+ + L F P Sbjct: 27 FVGGGIVGLIIAL-----SRTSESKLAQALSMGFIQLFR--GTPLLLQLFLV---FFGAP 76 Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309 V+G ++P F + +AL+ + AF+ EI R + A+P GQ EAA ALGL +R Sbjct: 77 VIGL-------DINPWFAAA-VALTLNSGAFLGEIWRGCIQAIPSGQWEAAEALGLNYRH 128 Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369 R V+LPQA++ +PP + ++K +SLA +GF +L G I N T Q + + + Sbjct: 129 KMRDVVLPQALKIAVPPTVGYLVQIVKGTSLAAIIGFTELTRAGQIINNATFQPMMVFTV 188 Query: 370 WMFIYLSLSIMIALFMNRLNAKIALK 395 IY L +++ + + ++AL Sbjct: 189 VAIIYFFLCWPLSMLASYMERRLALS 214 >gi|312869289|ref|ZP_07729456.1| ABC transporter, permease protein [Lactobacillus oris PB013-T2-3] gi|311095163|gb|EFQ53440.1| ABC transporter, permease protein [Lactobacillus oris PB013-T2-3] Length = 502 Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 57/203 (28%), Positives = 105/203 (51%), Gaps = 22/203 (10%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 + F++G++ +L ++ H + + YI I G P LV I Y Sbjct: 316 IVGFLIGVLFALMRLSDNKLLH-----GIAICYIE--FIRGTPMLVQIMFVY-------- 360 Query: 251 LGQFNFIGGSTVS--PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308 F G+ + P ++ IA++ + A++AEI+RSG+ ++P GQ EAA +LG+T + Sbjct: 361 -----FGIGAIIQSMPALVAGIIAVAINSGAYVAEIIRSGIQSLPLGQTEAARSLGMTKQ 415 Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368 + R +++PQA+++I P L ++++ LLK+SSL +G +L+ + T + + + Sbjct: 416 QTFRYIIMPQALKNIWPALGNEFITLLKDSSLVSTIGVTELMYQTQLVQADTYKGVLPLF 475 Query: 369 IWMFIYLSLSIMIALFMNRLNAK 391 I M IY L+ + +N K Sbjct: 476 ITMMIYFFLTFTLTRILNHFEKK 498 Score = 38.1 bits (87), Expect = 2.6, Method: Compositional matrix adjust. Identities = 25/67 (37%), Positives = 33/67 (49%) Query: 83 SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142 +SY T + G T + +I +IG L RLS NKL+ I Y+E R P L Sbjct: 294 ASYWTFFVKGVKYTLLITVLAVIVGFLIGVLFALMRLSDNKLLHGIAICYIEFIRGTPML 353 Query: 143 VVIFFLY 149 V I F+Y Sbjct: 354 VQIMFVY 360 >gi|325955845|ref|YP_004286455.1| glutamine ABC transporter substrate binding/permease protein [Lactobacillus acidophilus 30SC] gi|325332410|gb|ADZ06318.1| glutamine ABC transporter substrate binding/permease protein [Lactobacillus acidophilus 30SC] gi|327182680|gb|AEA31127.1| glutamine ABC transporter substrate binding/permease protein [Lactobacillus amylovorus GRL 1118] Length = 494 Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 66/202 (32%), Positives = 107/202 (52%), Gaps = 22/202 (10%) Query: 189 IFVFSFVLGIVLSLFAT--RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246 I VFS ++GIVL + RLSR+ K + + YI I G P +V I Y Sbjct: 301 ITVFSVLIGIVLGMLLALMRLSRN---KLLHWIAVCYIE--FIRGTPQMVQILFVY---- 351 Query: 247 DKPVLGQFNFIGGSTVS--PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304 F G+ +S ++ IA+ + A++AE +RSG+ +V +GQ EAA +LG Sbjct: 352 ---------FGVGALISNLSAVVAGIIAIGLNSGAYVAEDIRSGIASVAKGQTEAARSLG 402 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364 L+ KA R V++PQA+++I P L ++++ LLK+SSL +G +L+ I T + + Sbjct: 403 LSQAKAYRYVIIPQALKNIWPALGNEFITLLKDSSLVSVIGVTELMYQTELIQTSTYRGV 462 Query: 365 EIILIWMFIYLSLSIMIALFMN 386 + I M IY ++ + +N Sbjct: 463 LPLFIAMIIYFIMTFTLTRLLN 484 Score = 42.7 bits (99), Expect = 0.088, Method: Compositional matrix adjust. Identities = 31/106 (29%), Positives = 49/106 (46%), Gaps = 3/106 (2%) Query: 44 CVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSG 103 VN N +EK NL + +L A + + + + YA + G T + Sbjct: 249 AVNKTINRVEKKNL-INKEYLPAAAKYM--KTAQKTNTMAKYAPYFVKGVGYTIVITVFS 305 Query: 104 MIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 ++ ++G L+ RLS NKL+ WI Y+E R P +V I F+Y Sbjct: 306 VLIGIVLGMLLALMRLSRNKLLHWIAVCYIEFIRGTPQMVQILFVY 351 >gi|47569972|ref|ZP_00240636.1| amino acid ABC transporter, permease protein VC0009 [Bacillus cereus G9241] gi|47553370|gb|EAL11757.1| amino acid ABC transporter, permease protein VC0009 [Bacillus cereus G9241] Length = 222 Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 65/222 (29%), Positives = 114/222 (51%), Gaps = 21/222 (9%) Query: 177 SFPTL------TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230 SFP L T+ + SFV+GI L++ ++ + ++ +YIS F Sbjct: 11 SFPQLFKYVYITLGITVVSMIISFVIGIGLAIITKNKTKFLY-----SIARVYISFFR-- 63 Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290 G P LV + + L+F P TV + I LS AA+++EI+R Sbjct: 64 GTPLLVQL---FVLYFGLP-----QIFPTFTVLTAMQATLIGLSLNNAAYLSEIIRGSFN 115 Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 AV GQM+A +++G+T +A R ++ PQA+R +P L + ++ LLK SSL+ A+G A+++ Sbjct: 116 AVESGQMDACLSVGMTKAQAMRQIIFPQAIRVAVPSLGNNFVGLLKESSLSFALGVAEIL 175 Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 + + Q+ + +E L +Y ++I+I+ +L K+ Sbjct: 176 AQAKMLAAQSYRYMESYLAVAIVYWIITIVISWGQKKLEKKL 217 >gi|186683156|ref|YP_001866352.1| polar amino acid ABC transporter inner membrane subunit [Nostoc punctiforme PCC 73102] gi|186465608|gb|ACC81409.1| polar amino acid ABC transporter, inner membrane subunit [Nostoc punctiforme PCC 73102] Length = 501 Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 54/159 (33%), Positives = 88/159 (55%), Gaps = 5/159 (3%) Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290 G P LV I + ++F P + Q IG + + IALS AA+ AE+VR+G+ Sbjct: 338 GTPLLVQI---FMIYFGLPAISQE--IGFTFTFDRLTAGIIALSLNNAAYTAEVVRAGIQ 392 Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 ++ GQ EAA +LGL+ + V+ PQA R +IPPL + +++LLK++SL +G +L+ Sbjct: 393 SIETGQAEAAQSLGLSSIQTMSYVIFPQAFRRMIPPLGNDFISLLKDTSLVSVIGLEELL 452 Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 G I+ +A EI +YL L+++ + + L Sbjct: 453 RKGQLIVADNYRAFEIYAGVAVVYLCLTLLFSQAFSHLE 491 Score = 40.0 bits (92), Expect = 0.69, Method: Compositional matrix adjust. Identities = 24/61 (39%), Positives = 33/61 (54%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G + T L ++ I G+L+G RLS V W+ R YV+ FR P LV IF + Sbjct: 289 LLQGALVTLQLTIISVVFGLIGGSLIGIVRLSRITPVRWLARAYVDFFRGTPLLVQIFMI 348 Query: 149 Y 149 Y Sbjct: 349 Y 349 >gi|325124980|gb|ADY84310.1| Putative glutamine ABC transporter [Lactobacillus delbrueckii subsp. bulgaricus 2038] Length = 527 Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 45/126 (35%), Positives = 78/126 (61%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I +S T A++AE++R G+I+ P+GQ EAA ALG+TH + ++LPQA+R+ +P +T++ Sbjct: 384 IIVSINTGAYLAEVIRGGIISTPKGQFEAASALGMTHNQRMWNIILPQAIRNCLPSITNE 443 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++ +K++S+ + ++L VG TI +Q+ Q + L+ IYL L+ I N + Sbjct: 444 FIVNIKDTSVLSIISVSELFFVGSTIASQSFQFFQTYLVISVIYLFLTFTITRIFNLIEK 503 Query: 391 KIALKE 396 I E Sbjct: 504 HIEGPE 509 >gi|71903839|ref|YP_280642.1| arginine transport system permease protein [Streptococcus pyogenes MGAS6180] gi|71802934|gb|AAX72287.1| arginine transport system permease protein [Streptococcus pyogenes MGAS6180] Length = 228 Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 55/187 (29%), Positives = 103/187 (55%), Gaps = 12/187 (6%) Query: 214 KTGKALPLLYISTFLIF---GLPTLVLIALKYQ-LHFDKPVLGQFNFIGGSTVSPEFMSL 269 K PL ++ ++ G P +V I + + +HF+ IG + +F L Sbjct: 42 KRSHVKPLTWVVNLYVWIFRGTPMVVQIMIAFAWMHFNN-----MPTIGFGVLDLDFSRL 96 Query: 270 Y---IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326 I +S + A+I+EIVR+G+ AVP+GQ+EAA +LG+ + A R V+LPQA ++I+P Sbjct: 97 LPGIIIISLNSGAYISEIVRAGIEAVPKGQLEAAYSLGIRPQNAMRYVILPQAFKNILPA 156 Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386 L ++++ ++K+S+ +G +L + +++ T I +L+ F YL ++ ++A + Sbjct: 157 LGNEFITIIKDSAFLQTIGVMELWNGAQSVVTATYSPISPLLVAAFYYLMVTTVMAQLLA 216 Query: 387 RLNAKIA 393 L +A Sbjct: 217 VLERHMA 223 >gi|84387890|ref|ZP_00990904.1| amino acid ABC transporter, permease protein [Vibrio splendidus 12B01] gi|84377236|gb|EAP94105.1| amino acid ABC transporter, permease protein [Vibrio splendidus 12B01] Length = 265 Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 67/207 (32%), Positives = 106/207 (51%), Gaps = 17/207 (8%) Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247 I + S V +++ L T L R+ + G+ L Y+ LI P LV I Y L+F Sbjct: 69 NISLISLVATLIIGL-TTALLRNSNSVVGRTLATSYVE--LIRNTPLLVQI---YLLYFV 122 Query: 248 -KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306 PVLG F + +AL+ + A+ AEI R+GL + RGQ EAA +LGL+ Sbjct: 123 FGPVLGL----------DRFSTAVLALALFQGAYTAEIFRAGLNGIARGQFEAAQSLGLS 172 Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 V+LPQ ++ +PPLT++ ++L+KNSS+ + DL + I+++T EI Sbjct: 173 KTYTYWDVILPQVVQRTLPPLTNEVISLIKNSSIVSVMAIFDLTTEARNIVSETAMPFEI 232 Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIA 393 IYL+L++ ++ L K+ Sbjct: 233 WFSVAIIYLALTLSLSAVAAWLEHKLG 259 >gi|296129248|ref|YP_003636498.1| polar amino acid ABC transporter, inner membrane subunit [Cellulomonas flavigena DSM 20109] gi|296021063|gb|ADG74299.1| polar amino acid ABC transporter, inner membrane subunit [Cellulomonas flavigena DSM 20109] Length = 273 Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 47/125 (37%), Positives = 76/125 (60%), Gaps = 4/125 (3%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IAL +AA+I+E VR+G+ AVPRGQ+EAA +LG++H + V+LPQA R+++PPLT++ Sbjct: 144 IALGSVSAAYISETVRAGIQAVPRGQVEAARSLGMSHTRTMIEVVLPQAFRTVMPPLTNE 203 Query: 331 YLNLLKNSSLAVAVG----FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386 L L K++SL +G F +L VG ++ + + + YL ++I + Sbjct: 204 VLLLTKDTSLLFVLGQTPEFFELTKVGRDALSTASGGLTGLFVVGACYLVITIPLGFLAR 263 Query: 387 RLNAK 391 RL + Sbjct: 264 RLERR 268 >gi|330807008|ref|YP_004351470.1| Putative ABC transporter, permease component [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327375116|gb|AEA66466.1| Putative ABC transporter, permease component [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 229 Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 68/206 (33%), Positives = 108/206 (52%), Gaps = 17/206 (8%) Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239 TLT++ A + +L I L + R SR ++ + A P YI F G P LV + Sbjct: 18 TLTLELVAIAVIAGLLLAIPLGI--ARSSRLWYVR---AFPYAYI--FFFRGTPLLVQLF 70 Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295 L Y L QF+ + S + P F ++ +TAA+IAEI+R + A+PRG Sbjct: 71 LVYY------GLAQFDAVRSSAMWPYLRDPFWCATATMTLHTAAYIAEILRGAIQAIPRG 124 Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355 ++EAA ALG++ KA ++LP+A R +P +++ + +LK S+LA V +L + T Sbjct: 125 EIEAARALGMSRPKALLYIMLPRAARIGLPAYSNEVILMLKASALASTVTLLELTGMART 184 Query: 356 IINQTGQAIEIILIWMFIYLSLSIMI 381 II +T +EI YL +S ++ Sbjct: 185 IIARTYMPVEIFFAAGMFYLLMSFVL 210 >gi|310639893|ref|YP_003944651.1| glutamine abc transporter permease protein [Paenibacillus polymyxa SC2] gi|309244843|gb|ADO54410.1| Glutamine ABC transporter permease protein [Paenibacillus polymyxa SC2] Length = 219 Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 62/208 (29%), Positives = 110/208 (52%), Gaps = 33/208 (15%) Query: 193 SFVLGIVLSLFATRLSRHF------HEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246 SF+LG ++++F + + + + +PLL + F GLPTL + Sbjct: 34 SFILGAIIAIFRIAPFKWLNWIGTVYVEVIRNIPLLIVVLFFYLGLPTLGI--------- 84 Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306 P+ G F+ G+ + L+ YTA+FIAE +R+G+ +VP+GQ EA+ + GL Sbjct: 85 --PLDG---FVSGT----------LGLTVYTASFIAEAIRAGIQSVPKGQFEASRSSGLN 129 Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 + + ++LPQA++ ++P + +Q++NL+KNSS+ V DL+ I + T I + Sbjct: 130 YNQTMISIILPQAIKIVLPAIGNQFINLVKNSSVLAIVAGLDLMYYSDLINSDTFLPITV 189 Query: 367 ILIWMFIYLSLSI---MIALFMNRLNAK 391 I +YL L++ + L+M R +K Sbjct: 190 YAITALLYLVLTVPLSFLVLYMERRLSK 217 Score = 44.3 bits (103), Expect = 0.033, Method: Compositional matrix adjust. Identities = 26/68 (38%), Positives = 39/68 (57%), Gaps = 1/68 (1%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151 G ++T + +I + I+G ++ R++ K + WI VYVEV RNIP L+V+ F Y Sbjct: 19 GLLHTVQASVIALIGSFILGAIIAIFRIAPFKWLNWIGTVYVEVIRNIPLLIVVLFFYLG 78 Query: 152 VLSVLPIP 159 L L IP Sbjct: 79 -LPTLGIP 85 >gi|306825587|ref|ZP_07458926.1| amino acid ABC superfamily ATP binding cassette transporter, permease protein [Streptococcus sp. oral taxon 071 str. 73H25AP] gi|304431948|gb|EFM34925.1| amino acid ABC superfamily ATP binding cassette transporter, permease protein [Streptococcus sp. oral taxon 071 str. 73H25AP] Length = 227 Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 53/183 (28%), Positives = 103/183 (56%), Gaps = 7/183 (3%) Query: 220 PLLYISTFLIF---GLPTLVLIALKYQL-HFDKPVLGQFNFIGGSTVSPEFMSLYIALSC 275 PL++ + ++ G P +V I + + L H + P + Q +G + + +S Sbjct: 48 PLVWFANVYVWIFRGTPMMVQIMIAFALMHINAPTI-QVGILGVDL--SRLIPGILIISM 104 Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335 + A+++E VR+G+ AVP+GQ+EAA +LG+ + A R V+LPQA+++I+P L ++++ ++ Sbjct: 105 NSGAYVSETVRAGINAVPKGQLEAAYSLGIRPKNAMRYVILPQAIKNILPALGNEFITII 164 Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395 K+SSL A+G +L + T+ T + +L F YL ++ ++ + + I Sbjct: 165 KDSSLLSAIGVMELWNGATTVATTTYLPLTPLLFAAFYYLIMTSVLTVALKAFEKHIGQG 224 Query: 396 EKK 398 +KK Sbjct: 225 DKK 227 >gi|254512946|ref|ZP_05125012.1| ABC-type glutamine transport system, permease component [Rhodobacteraceae bacterium KLH11] gi|221532945|gb|EEE35940.1| ABC-type glutamine transport system, permease component [Rhodobacteraceae bacterium KLH11] Length = 252 Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 59/213 (27%), Positives = 109/213 (51%), Gaps = 24/213 (11%) Query: 191 VFSFVLGIVLSL------FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244 V S +G++++L + RL + + +A+PLL + ++ +GLP + Sbjct: 57 VLSIAIGLLVALPGLSEKRSWRLVNRVYVEFIRAIPLLPMLFWVFYGLPIV--------- 107 Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304 F +G + F I L+ +AF AEI R+G+ ++ RGQ EAA +G Sbjct: 108 ---------FQSMGLNIPIDPFWGAIITLAISDSAFTAEIYRAGIQSIARGQREAAQTIG 158 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364 L + + R V+LPQA+R I+PPL +Q++ ++K S+ A +G +L ++ + + Sbjct: 159 LNYIQTMRYVILPQAIRRILPPLANQFIYIVKMSAFASVIGMQELTRRANELVVTEYRPL 218 Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 EI + +F YL L ++I+ + L ++ E+ Sbjct: 219 EIYTLLIFEYLILVLIISAGVRWLERRMGADER 251 >gi|293365081|ref|ZP_06611798.1| amino acid ABC superfamily ATP binding cassette transporter, permease protein [Streptococcus oralis ATCC 35037] gi|307702210|ref|ZP_07639170.1| binding-protein-dependent transport system inner membrane component family protein [Streptococcus oralis ATCC 35037] gi|315612852|ref|ZP_07887763.1| amino acid ABC superfamily ATP binding cassette transporter, permease protein [Streptococcus sanguinis ATCC 49296] gi|322374624|ref|ZP_08049138.1| amino acid ABC transporter, permease protein [Streptococcus sp. C300] gi|331266721|ref|YP_004326351.1| ABC transporter membrane-spanning permease-polar amino acid transport system; glutamine transport,putative [Streptococcus oralis Uo5] gi|291316531|gb|EFE56967.1| amino acid ABC superfamily ATP binding cassette transporter, permease protein [Streptococcus oralis ATCC 35037] gi|307624223|gb|EFO03200.1| binding-protein-dependent transport system inner membrane component family protein [Streptococcus oralis ATCC 35037] gi|315314962|gb|EFU63003.1| amino acid ABC superfamily ATP binding cassette transporter, permease protein [Streptococcus sanguinis ATCC 49296] gi|321280124|gb|EFX57163.1| amino acid ABC transporter, permease protein [Streptococcus sp. C300] gi|326683393|emb|CBZ01011.1| ABC transporter membrane-spanning permease-polar amino acid transport system; glutamine transport,putative [Streptococcus oralis Uo5] Length = 227 Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 53/183 (28%), Positives = 103/183 (56%), Gaps = 7/183 (3%) Query: 220 PLLYISTFLIF---GLPTLVLIALKYQL-HFDKPVLGQFNFIGGSTVSPEFMSLYIALSC 275 PL++ + ++ G P +V I + + L H + P + Q +G + + +S Sbjct: 48 PLVWFANVYVWIFRGTPMMVQIMIAFALMHINAPTI-QVGILGVDL--SRLIPGILIISM 104 Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335 + A+++E VR+G+ AVP+GQ+EAA +LG+ + A R V+LPQA+++I+P L ++++ ++ Sbjct: 105 NSGAYVSETVRAGINAVPKGQLEAAYSLGIRPKNAMRYVILPQAIKNILPALGNEFITII 164 Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395 K+SSL A+G +L + T+ T + +L F YL ++ ++ + + I Sbjct: 165 KDSSLLSAIGVMELWNGATTVATTTYLPLTPLLFAAFYYLIMTSVLTVALKAFEKHIGQG 224 Query: 396 EKK 398 +KK Sbjct: 225 DKK 227 >gi|152965463|ref|YP_001361247.1| polar amino acid ABC transporter inner membrane protein [Kineococcus radiotolerans SRS30216] gi|151359980|gb|ABS02983.1| polar amino acid ABC transporter, inner membrane subunit [Kineococcus radiotolerans SRS30216] Length = 282 Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 46/140 (32%), Positives = 84/140 (60%) Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315 F G P + + L+ Y AF+AEI+R+G+ A+P+GQ EA +A+GLT + + Sbjct: 122 FYGSGGDVPLYWCGVLGLTVYNGAFLAEILRAGVEALPKGQREAGLAVGLTESQVLWTIQ 181 Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375 LPQA+RS++P L SQ + +LK+S+L +G+++L+ G + +Q I +L+ +Y+ Sbjct: 182 LPQAVRSMLPSLVSQIVVILKDSALIYIIGYSELLRWGTQLGSQYFNLIPAMLVIAVVYV 241 Query: 376 SLSIMIALFMNRLNAKIALK 395 +++IA + +++ K Sbjct: 242 GTNMVIAAIAKVVERRMSTK 261 >gi|118586385|ref|ZP_01543834.1| glutamine ABC transporter, integral membrane protein [Oenococcus oeni ATCC BAA-1163] gi|118433172|gb|EAV39889.1| glutamine ABC transporter, integral membrane protein [Oenococcus oeni ATCC BAA-1163] Length = 222 Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 53/168 (31%), Positives = 99/168 (58%), Gaps = 16/168 (9%) Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287 +I LP L++I + ++F PV+G + P F + IA++ + + +AEI+R Sbjct: 66 VIRNLPLLLII---FFVYFALPVIGIY--------LPVFWATVIAMTVFESTMLAEIIRG 114 Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347 GL+A+P GQ E A ++G+T+++A ++LPQA++ +IPP+ SQ ++L+K++SLAV + A Sbjct: 115 GLLAIPIGQTEGARSVGMTNQQALLNIILPQAIKKMIPPIISQLISLVKDTSLAVGIVLA 174 Query: 348 DLVSVGGTIINQTGQA-----IEIILIWMFIYLSLSIMIALFMNRLNA 390 ++ G I Q I + +++ + LS++ F +R+ A Sbjct: 175 EMTFRGQIIYAQNSNYTIPVFIALAIMYFILNYGLSLIARWFDHRMAA 222 >gi|222102871|ref|YP_002539910.1| ABC transporter membrane spanning protein (amino acid) [Agrobacterium vitis S4] gi|221739472|gb|ACM40205.1| ABC transporter membrane spanning protein (amino acid) [Agrobacterium vitis S4] Length = 290 Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 66/225 (29%), Positives = 114/225 (50%), Gaps = 10/225 (4%) Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235 LS LT+ + VF G ++++ AT KAL + ++ F G+P + Sbjct: 63 LSGVVLTLQLTSGAMVFGIAFGCIVAVMATS-----QNIVLKALAIAFVWWFR--GVPLI 115 Query: 236 VLIALKYQLHFDKPV--LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293 V I + + P +G ++ + V+P ++AL + AA ++EI+R GL AV Sbjct: 116 VQIFFWFNIALFIPEVGIGSYSISINALVTPALAG-FLALGLHEAANMSEIIRGGLTAVD 174 Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353 RGQ EAA +LGL + R V+LPQA+R I+PP +Q + +LK S++ +G DL++ Sbjct: 175 RGQREAASSLGLRPLQTLRTVVLPQAVRLIVPPTGNQAIGMLKASAIVSVIGMQDLLTQA 234 Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 I + IE++ + YL ++ + ++ L +A K + Sbjct: 235 QAIYARNFLVIELLCVASLWYLLITTLASIGQYFLEKHLAPKGRN 279 >gi|86360984|ref|YP_472871.1| glutamine ABC transporter, ATP-binding protein [Rhizobium etli CFN 42] gi|86285086|gb|ABC94144.1| glutamine ABC transporter, ATP-binding protein [Rhizobium etli CFN 42] Length = 513 Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 67/213 (31%), Positives = 112/213 (52%), Gaps = 24/213 (11%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 V ++G+VL++ SR LP I T + GLP +V I + Sbjct: 41 VLGVIIGMVLAVMGISQSRWLR------LPA-RIYTDIFRGLPAIVTIL----------I 83 Query: 251 LGQ-FNFIGGSTVSPEFMSLYI-ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308 +GQ F IG P L I ALS A+I EI RSG+ +V RGQMEA AL +++ Sbjct: 84 IGQGFARIGRDIFGPSPFPLGILALSLIAGAYIGEIFRSGIQSVERGQMEACRALSMSYG 143 Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF----ADLVSVGGTIINQTGQAI 364 + RL+++PQ +R ++P L +Q++ +K+SSL +G ++ VG TG Sbjct: 144 QGMRLIVIPQGVRRVLPALVNQFIGNVKDSSLVYFLGLLASEREIFRVGQDQAVVTGNLS 203 Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 ++L +F YL++++ + F+N ++A++ L ++ Sbjct: 204 PLLLAGVF-YLAITVPLTHFVNHIDARLRLGKQ 235 >gi|116513356|ref|YP_812262.1| ABC-type amino acid transport system, permease and periplasmic component [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|116092671|gb|ABJ57824.1| amino acid ABC transporter membrane protein, PAAT family / amino acid ABC transporter substrate-binding protein, PAAT family [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] Length = 527 Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 45/126 (35%), Positives = 78/126 (61%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I +S T A++AE++R G+I+ P+GQ EAA ALG+TH + ++LPQA+R+ +P +T++ Sbjct: 384 IIVSINTGAYLAEVIRGGIISTPKGQFEAASALGMTHNQRMWNIILPQAIRNCLPSITNE 443 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++ +K++S+ + ++L VG TI +Q+ Q + L+ IYL L+ I N + Sbjct: 444 FIVNIKDTSVLSIISVSELFFVGSTIASQSFQFFQTYLVISVIYLFLTFTITRIFNLIEK 503 Query: 391 KIALKE 396 I E Sbjct: 504 HIEGPE 509 >gi|227327759|ref|ZP_03831783.1| amino acid ABC transporter [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 254 Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 40/133 (30%), Positives = 78/133 (58%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+S +A++ A+++EI R+G+ ++ GQMEA+ +LG+++ + R V+LPQA R ++P Sbjct: 122 FLSCVVAITLNAGAYVSEIFRAGIQSIDHGQMEASRSLGMSYGRTMRKVILPQAFRRMLP 181 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PL + + ++K+SSLA A+G ADL T+ E L +Y ++ +++L + Sbjct: 182 PLGNNAIAIVKDSSLASAIGLADLAYAARTVSGAYATYWEPYLTISIVYWVITFLLSLLV 241 Query: 386 NRLNAKIALKEKK 398 + + + + Sbjct: 242 RHMEMRFGKSDSR 254 >gi|104773375|ref|YP_618355.1| amino acid ABC transporter permease/substrate-binding protein [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|103422456|emb|CAI97009.1| Amino acid ABC transporter, substrate binding / permease protein [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] Length = 527 Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 45/126 (35%), Positives = 78/126 (61%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I +S T A++AE++R G+I+ P+GQ EAA ALG+TH + ++LPQA+R+ +P +T++ Sbjct: 384 IIVSINTGAYLAEVIRGGIISTPKGQFEAASALGMTHNQRMWNIILPQAIRNCLPSITNE 443 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++ +K++S+ + ++L VG TI +Q+ Q + L+ IYL L+ I N + Sbjct: 444 FIVNIKDTSVLSIISVSELFFVGSTIASQSFQFFQTYLVISVIYLFLTFTITRIFNLIEK 503 Query: 391 KIALKE 396 I E Sbjct: 504 HIEGPE 509 >gi|320450573|ref|YP_004202669.1| amino acid ABC transporter permease [Thermus scotoductus SA-01] gi|320150742|gb|ADW22120.1| amino acid ABC transporter, permease protein [Thermus scotoductus SA-01] Length = 258 Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 73/222 (32%), Positives = 115/222 (51%), Gaps = 16/222 (7%) Query: 181 LTMDTNAKIFVFSFVLGIVLSLFAT--RLSRHFHEKTGKALPLLYISTFLIF---GLPTL 235 L + K+ + S + G+V+ +FA RLSR + LP ++F I+ G P L Sbjct: 48 LGAEITLKLTLISSLAGLVIGVFAGMFRLSRRLWVR----LP----ASFYIWVTRGTPLL 99 Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295 V I Y V + + +IALS A+ AE+VR+G+ A+P+G Sbjct: 100 VQILFAYNALPLLLQPLWPE---AQQVLTPYWAAFIALSFNVGAYNAEVVRAGIQAIPKG 156 Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355 Q EAA +LGL+ R V+LPQA+R ++PPL + + LLK+SSLA + +L G Sbjct: 157 QWEAAWSLGLSPADTMRFVILPQALRIVVPPLVNNVVALLKDSSLASVIALTELALSGQR 216 Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 II+ T + +E+ L IYL L+ ++ F N L ++ + + Sbjct: 217 IISATFRPVEVYLAVAAIYLLLTTVLTFFTNLLERRLQVAGR 258 >gi|253700904|ref|YP_003022093.1| polar amino acid ABC transporter inner membrane protein [Geobacter sp. M21] gi|251775754|gb|ACT18335.1| polar amino acid ABC transporter, inner membrane subunit [Geobacter sp. M21] Length = 261 Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 64/201 (31%), Positives = 109/201 (54%), Gaps = 19/201 (9%) Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252 + +L IVL LF T L R + LY+ +I G+P LV Q+ + LG Sbjct: 73 AILLAIVLGLF-TGLGRISKNRFINGTASLYVE--IIRGIPLLV------QIFYIYYALG 123 Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312 F + P +S IA++ A++ E+VR+G+ ++ +GQ EAA++LG+ R+ Sbjct: 124 SFVQV------PPILSAIIAMAVCYGAYMGEVVRAGIESIHKGQREAALSLGMNGRQTMI 177 Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE----IIL 368 V+LPQA++ I+PP+ ++++ LLK+SSL + ADL+ G +++ E I L Sbjct: 178 HVILPQAVKVILPPVGNEFIALLKDSSLVSIIAVADLLRRGREFASESFTYFETYTVIAL 237 Query: 369 IWMFIYLSLSIMIALFMNRLN 389 I++ I L S +I + R++ Sbjct: 238 IYLIITLFFSKIIGVMEERVS 258 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 23/68 (33%), Positives = 40/68 (58%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151 G + TF + ++ A ++G G GR+S N+ + +YVE+ R IP LV IF++Y + Sbjct: 62 GILVTFQVTLGAILLAIVLGLFTGLGRISKNRFINGTASLYVEIIRGIPLLVQIFYIYYA 121 Query: 152 VLSVLPIP 159 + S + +P Sbjct: 122 LGSFVQVP 129 >gi|83950534|ref|ZP_00959267.1| glutamate/aspartate ABC transporter, permease protein [Roseovarius nubinhibens ISM] gi|83838433|gb|EAP77729.1| glutamate/aspartate ABC transporter, permease protein [Roseovarius nubinhibens ISM] Length = 238 Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 47/127 (37%), Positives = 74/127 (58%) Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322 +PEF++ I L YTA+ +AE VR+G+ AV +G + A+ A G + + R VLLP + R Sbjct: 100 NPEFVTAVIGLGLYTASRVAEQVRAGINAVGKGLVAASYANGFSTAQTYRYVLLPISFRL 159 Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382 I+PP+TS++L + KNSSLA+ +G +L + I T Q E IY+ +++M Sbjct: 160 IVPPMTSEFLTIFKNSSLALTIGLLELTAQSQQIAEYTFQGFEAYTAATIIYVVIALMAT 219 Query: 383 LFMNRLN 389 + L Sbjct: 220 VIAQMLE 226 Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 28/76 (36%), Positives = 46/76 (60%) Query: 82 DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141 + Y + ++ G TF +A S + A ++G L+G GR N+ +A++C YVE+FRN+P Sbjct: 12 EEQYLSWLISGVGWTFSVALSAWVLALLVGVLIGVGRTLPNRPIAFLCTTYVEIFRNVPL 71 Query: 142 LVVIFFLYKSVLSVLP 157 LV +F Y V ++P Sbjct: 72 LVQLFLWYFVVPEIVP 87 >gi|310639892|ref|YP_003944650.1| glutamine abc transporter permease protein [Paenibacillus polymyxa SC2] gi|309244842|gb|ADO54409.1| Glutamine ABC transporter permease protein [Paenibacillus polymyxa SC2] Length = 216 Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 72/222 (32%), Positives = 114/222 (51%), Gaps = 39/222 (17%) Query: 181 LTMDTNAKIFVFSFVLGIVLSLFA-TRLS-----RHFHEKTGKALPLLYISTFLIFGLPT 234 LT++ +FSF LGIV + TR+ F + LPLL I F+ LP+ Sbjct: 21 LTLEVAIYSIIFSFALGIVFGILRYTRIPVLSQVAAFIIDLIRNLPLLLIIFFIGMVLPS 80 Query: 235 LVL-IALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293 + L I+LK+ + LS + A IAEIVRSGL +V Sbjct: 81 IGLSISLKW-------------------------AAITGLSIFEGAMIAEIVRSGLNSVH 115 Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS-- 351 +GQ+EAA + GL++ + ++LPQA+R ++PP+ SQ+++L K++SLAV + +L Sbjct: 116 KGQLEAARSSGLSYSQTLWHIILPQALRRMVPPIVSQFISLFKDTSLAVIISLPELTHNI 175 Query: 352 --VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 VGG NQ+ I +L F+Y +++ ++L RL + Sbjct: 176 QIVGGQ--NQSF-VIPALLFAAFLYFAVNYSMSLIARRLEVR 214 >gi|163856808|ref|YP_001631106.1| polar amino acid transport system permease protein [Bordetella petrii DSM 12804] gi|163260536|emb|CAP42838.1| polar amino acid transport system permease protein [Bordetella petrii] Length = 222 Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 45/129 (34%), Positives = 80/129 (62%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P F + L Y+ A+++EIVR + +V RGQ EAA +LG++ +A R+++LPQA+ + Sbjct: 87 PAFACGVLGLGMYSGAYVSEIVRGAIQSVDRGQTEAARSLGMSSGQAMRIIILPQAVVRM 146 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 IPPL ++++ L+KNS+L + DL+ G II+ + +++E L+ IYL L+ Sbjct: 147 IPPLGNEFIALIKNSALVSLLTIHDLMHEGQKIISVSYRSLETYLVIALIYLVLTTATTT 206 Query: 384 FMNRLNAKI 392 + R+ ++ Sbjct: 207 VLRRIEHRL 215 >gi|91226241|ref|ZP_01261081.1| putative amino acid ABC transporter, permease protein [Vibrio alginolyticus 12G01] gi|91189252|gb|EAS75531.1| putative amino acid ABC transporter, permease protein [Vibrio alginolyticus 12G01] Length = 246 Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 43/102 (42%), Positives = 65/102 (63%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 F + IAL+ +AF+AE+ R G+ A+ RGQ EAA +LGL++ + RLV+LPQA R I+ Sbjct: 114 HFWAGVIALTIAESAFMAEVFRGGIQAISRGQHEAAESLGLSYWQKMRLVILPQAFRQIL 173 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 PPL +Q++ +LK SSL +G +DL ++ +EI Sbjct: 174 PPLGNQFVYILKMSSLVSVIGLSDLTRRANELVVNEYLPLEI 215 >gi|91786938|ref|YP_547890.1| amino acid ABC transporter permease [Polaromonas sp. JS666] gi|91696163|gb|ABE42992.1| amino acid ABC transporter membrane protein, PAAT family [Polaromonas sp. JS666] Length = 222 Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 61/207 (29%), Positives = 109/207 (52%), Gaps = 13/207 (6%) Query: 186 NAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH 245 +I S +LG V+ L + + L Y++ +I G P LV + + L Sbjct: 22 TVEITAASLLLGCVMGLLVGIGRLNPRRRIVYGLCTAYVA--IIRGTPLLVQL---FILF 76 Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305 F P QF + P F+ I L Y+ A+++E+VR + ++ RGQMEAA ++G+ Sbjct: 77 FGLP---QFGIL-----LPAFVCGVIGLGIYSGAYVSEVVRGAIQSIDRGQMEAARSIGM 128 Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365 + A R V+LPQA+ +IPPL ++++ L+KNS+L + D++ G II+ + +++E Sbjct: 129 SSGLAMRAVVLPQAVVRMIPPLGNEFIALIKNSALVSLLTIHDVMHEGQKIISVSYRSLE 188 Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKI 392 + L +Y L+ L + R+ ++ Sbjct: 189 VYLAIAVVYFVLTGATTLVLRRMELRL 215 Score = 36.6 bits (83), Expect = 7.2, Method: Compositional matrix adjust. Identities = 23/79 (29%), Positives = 41/79 (51%), Gaps = 7/79 (8%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAW-ICRVYVEVFRNIPPLVVIFF 147 +L G + T + + ++ ++G LVG GRL+ + + + +C YV + R P LV +F Sbjct: 15 LLRGALVTVEITAASLLLGCVMGLLVGIGRLNPRRRIVYGLCTAYVAIIRGTPLLVQLFI 74 Query: 148 LYKSVLSVLPIPDHSIVLP 166 L+ +P I+LP Sbjct: 75 LF------FGLPQFGILLP 87 >gi|301301393|ref|ZP_07207533.1| ABC transporter, permease protein [Lactobacillus salivarius ACS-116-V-Col5a] gi|300850998|gb|EFK78742.1| ABC transporter, permease protein [Lactobacillus salivarius ACS-116-V-Col5a] Length = 499 Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 59/201 (29%), Positives = 106/201 (52%), Gaps = 22/201 (10%) Query: 194 FVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ 253 FVLGI+L+L R H K L + YI I G P +V + Y Sbjct: 316 FVLGIILALM-----RLGHNKLLHGLAVAYIE--FIRGTPLMVQVMFVY----------- 357 Query: 254 FNFIGGSTVS--PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311 F G+ + P + IA+S ++A++AE++RSG+ ++ GQ EAA +LG++ ++ Sbjct: 358 --FGIGAVIQSLPALAAGIIAVSLNSSAYVAEVIRSGIESIAIGQTEAARSLGMSQKQTY 415 Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371 + V++PQA+++I P L ++++ L+K SS+ +G DL+ + + T + + + I M Sbjct: 416 QYVVIPQAIKNIWPALGNEFITLIKESSIVSVIGVGDLMYQTQLVQSATYKGVAPLAITM 475 Query: 372 FIYLSLSIMIALFMNRLNAKI 392 IY L+ ++ +N K+ Sbjct: 476 VIYFVLTFTLSKGLNYFEGKM 496 >gi|296314052|ref|ZP_06863993.1| polar amino amino acid ABC transporter, PAAT family, permease protein [Neisseria polysaccharea ATCC 43768] gi|296839302|gb|EFH23240.1| polar amino amino acid ABC transporter, PAAT family, permease protein [Neisseria polysaccharea ATCC 43768] Length = 248 Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 45/121 (37%), Positives = 73/121 (60%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +AL + A+I EI R+G+ ++ +GQMEAA +LG+T+ +A R V+LPQA+R ++PPL S+ Sbjct: 122 LALIANSGAYICEIFRAGIQSIDKGQMEAARSLGMTYPQAMRYVILPQALRRMLPPLASE 181 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++ LLK+SSL + +L V TI + E + IYL ++ + RL Sbjct: 182 FITLLKDSSLLSVIAVPELSYVQKTITGRYSVYEEPLYTVALIYLLMTTFLGWIFLRLEK 241 Query: 391 K 391 + Sbjct: 242 R 242 >gi|253690633|ref|YP_003019823.1| polar amino acid ABC transporter, inner membrane subunit [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251757211|gb|ACT15287.1| polar amino acid ABC transporter, inner membrane subunit [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 242 Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 57/222 (25%), Positives = 113/222 (50%), Gaps = 11/222 (4%) Query: 177 SFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV 236 +FP + A + S + G+ + T L G LL + +P ++ Sbjct: 17 TFPEGPLGGAALTLLMSLLAGVASAALGTILGVALAMSRGVWSALLAMVLGFFRAIPVIM 76 Query: 237 LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296 LI + +F P++ + PE ++ AL+ +A++A V++G++A+ RGQ Sbjct: 77 LI---FWTYFLLPIVFGVDI-------PEITTVVCALALIASAYLAHGVKAGIVAIGRGQ 126 Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356 +A ++LGL+ + ++LPQA+R ++P +Q+++L+K++SLA VG +L + + Sbjct: 127 WQAGLSLGLSRWQVLWQIVLPQALRMMVPSFINQWISLIKDTSLAYIVGVGELTFLATQV 186 Query: 357 INQTG-QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 N++ +E+ L +Y + + L NR+NA+ +EK Sbjct: 187 NNRSMVYPMEVFLFVALVYFVFCLSLELLANRVNARFNQQEK 228 >gi|288962138|ref|YP_003452433.1| general L-amino acid transport system permease protein [Azospirillum sp. B510] gi|288914404|dbj|BAI75889.1| general L-amino acid transport system permease protein [Azospirillum sp. B510] Length = 405 Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 38/81 (46%), Positives = 61/81 (75%) Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 ++ +TAA++AE VR GL A+P+GQ EAA ALGL++ + T L++LPQA+R +IPP+ +Q+ Sbjct: 276 GMTLFTAAYLAEAVRGGLQAIPKGQYEAADALGLSYWQKTMLIVLPQALRIVIPPIVNQF 335 Query: 332 LNLLKNSSLAVAVGFADLVSV 352 ++ K++SL VG DL++ Sbjct: 336 ISAFKDTSLVTIVGLYDLLTA 356 >gi|118590774|ref|ZP_01548175.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Stappia aggregata IAM 12614] gi|118436750|gb|EAV43390.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Stappia aggregata IAM 12614] Length = 268 Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 44/127 (34%), Positives = 79/127 (62%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +AL+ +AFIAE+ R+G+ AV +GQ+EAA ALG+ RL++ PQA+++I+PPL + Sbjct: 142 LALTIGYSAFIAEVFRAGIQAVDKGQIEAAEALGMNGWLRFRLIIFPQALKTILPPLGND 201 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++ L+K+SSL +G AD+ +G + + E + IYL ++I ++L + + Sbjct: 202 FVALIKDSSLVSVLGVADITQLGKVYAAGSFRYFETYNVVALIYLMMTITLSLALRKFER 261 Query: 391 KIALKEK 397 ++E+ Sbjct: 262 TKQIQER 268 >gi|304398822|ref|ZP_07380692.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea sp. aB] gi|304353526|gb|EFM17903.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea sp. aB] Length = 222 Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 64/207 (30%), Positives = 111/207 (53%), Gaps = 18/207 (8%) Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251 F +LG +L+L RLSR + + L +Y+S F G P LIA + +++ P Sbjct: 32 FGLLLGFILALM--RLSRFWPVRW---LARIYVSIFR--GTP---LIAQLFMIYYGLP-- 79 Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311 QF G + P S I LS TAA+ +E +R + ++ RGQ EAA ++G+T + Sbjct: 80 -QF----GIELDP-IPSAMIGLSLNTAAYASESLRGAISSIERGQWEAAASIGMTRWQTL 133 Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371 R V+LPQA R+ +PPL + +++L+K++SLA + +L I ++T + + L Sbjct: 134 RRVILPQAARTALPPLGNSFISLVKDTSLAATIQVPELFRQAQLITSRTLEVFTMYLAAS 193 Query: 372 FIYLSLSIMIALFMNRLNAKIALKEKK 398 IY ++ +++ NRL + ++ + Sbjct: 194 LIYWVMATVLSALQNRLEQHVNRQDSE 220 Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust. Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 8/89 (8%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G + T L+ GM ++G ++ RLS V W+ R+YV +FR P + +F + Sbjct: 15 LLKGALFTLQLSIGGMFFGLLLGFILALMRLSRFWPVRWLARIYVSIFRGTPLIAQLFMI 74 Query: 149 YKSV----LSVLPIPDHSIVLPFGMFLNN 173 Y + + + PIP I G+ LN Sbjct: 75 YYGLPQFGIELDPIPSAMI----GLSLNT 99 >gi|303246939|ref|ZP_07333215.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio fructosovorans JJ] gi|302491646|gb|EFL51529.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio fructosovorans JJ] Length = 292 Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 43/133 (32%), Positives = 82/133 (61%), Gaps = 3/133 (2%) Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321 V FM+ + L A++ EIVR G+++V +GQ++AA +LG+T A R ++LPQAMR Sbjct: 133 VMTPFMAALLGLGLNEGAYLTEIVRGGILSVDKGQIDAATSLGMTRLMAMRRIVLPQAMR 192 Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI---WMFIYLSLS 378 I+PP+ ++++ LLK SS+A A+ + +L+ I + +E++++ W I +++ Sbjct: 193 VIVPPIGNEFIGLLKTSSMASAIAYTELLHKAQIIYFVNAKVMELLIVATGWYLIVVTIL 252 Query: 379 IMIALFMNRLNAK 391 ++ + + R A+ Sbjct: 253 SVVQVGIERRFAR 265 >gi|299822124|ref|ZP_07054010.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Listeria grayi DSM 20601] gi|299815653|gb|EFI82891.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Listeria grayi DSM 20601] Length = 487 Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 39/91 (42%), Positives = 68/91 (74%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+S IALS +AA++AEI+R+G+ AV +GQMEAA +LG+T + R ++LPQA+++I+P Sbjct: 357 FLSGCIALSLNSAAYVAEIIRAGISAVNKGQMEAARSLGMTRGTSMRYIILPQAVKNILP 416 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356 L +++++++K SS+ +G +L+ V G + Sbjct: 417 ALGNEFVSVIKESSIVSVIGVGELMFVTGVV 447 >gi|227329655|ref|ZP_03833679.1| binding-protein-dependent transport system inner membrane component [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 242 Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 57/223 (25%), Positives = 114/223 (51%), Gaps = 11/223 (4%) Query: 177 SFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV 236 +FP + A + S + GI ++ T L G LL + +P ++ Sbjct: 17 TFPDGPLGGAALTLMMSLLAGIASAILGTILGVALAMSRGWWSALLAMVLGFFRAIPVIM 76 Query: 237 LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296 LI + +F P++ + PE ++ AL+ +A++A V++G++A+ RGQ Sbjct: 77 LI---FWTYFLLPIVFGVDI-------PEITTVVCALALIASAYLAHGVKAGIVAIGRGQ 126 Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356 +A ++LGL+ + ++LPQA+R ++P +Q+++L+K++SLA VG +L + + Sbjct: 127 WQAGLSLGLSRWQVLWQIVLPQALRMMVPSFINQWISLIKDTSLAYIVGVGELTFLATQV 186 Query: 357 INQTG-QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 N++ +E+ L +Y + + L N +NA+ +EK+ Sbjct: 187 NNRSMVYPMEVFLFVALVYFVFCLSLELLANGVNARFNQQEKQ 229 >gi|84496802|ref|ZP_00995656.1| putative glutamate transporter [Janibacter sp. HTCC2649] gi|84383570|gb|EAP99451.1| putative glutamate transporter [Janibacter sp. HTCC2649] Length = 223 Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 48/126 (38%), Positives = 72/126 (57%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + LS Y AFI E +RSG+ VP GQ EAA A+GLT ++ R VLLPQA R I P+ S Sbjct: 98 VVLSIYHGAFICEALRSGVNTVPLGQAEAARAIGLTFGQSMREVLLPQAFRGAIAPIGST 157 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 + L KN+++A +G + + II G I I LI+ ++ L++ + L+ Sbjct: 158 IIALTKNTTVAAVIGVGEATNAMNVIIENEGSGITIFLIFALGFVILTLPLGTAFTALSR 217 Query: 391 KIALKE 396 ++A+K Sbjct: 218 RLAVKR 223 >gi|319763454|ref|YP_004127391.1| polar amino acid abc transporter, inner membrane subunit [Alicycliphilus denitrificans BC] gi|330824299|ref|YP_004387602.1| polar amino acid ABC transporter inner membrane subunit [Alicycliphilus denitrificans K601] gi|317118015|gb|ADV00504.1| polar amino acid ABC transporter, inner membrane subunit [Alicycliphilus denitrificans BC] gi|329309671|gb|AEB84086.1| polar amino acid ABC transporter, inner membrane subunit [Alicycliphilus denitrificans K601] Length = 222 Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 44/129 (34%), Positives = 80/129 (62%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P F+ I L Y+ A+++EIVR + ++ +GQMEAA ++GL+ +A R V+LPQA+ + Sbjct: 87 PAFVCGVIGLGIYSGAYVSEIVRGAIQSIDKGQMEAARSIGLSSGQAMRSVVLPQAVVRM 146 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 IPPL ++++ L+KNS+L + DL+ G II+ + +++E+ L +Y L+ L Sbjct: 147 IPPLGNEFIALIKNSALVSLLTIHDLMHEGQKIISVSYRSLEVYLAIAVVYFVLTGATTL 206 Query: 384 FMNRLNAKI 392 + + ++ Sbjct: 207 VLRHMELRL 215 >gi|319761713|ref|YP_004125650.1| polar amino acid abc transporter, inner membrane subunit [Alicycliphilus denitrificans BC] gi|317116274|gb|ADU98762.1| polar amino acid ABC transporter, inner membrane subunit [Alicycliphilus denitrificans BC] Length = 232 Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 47/135 (34%), Positives = 83/135 (61%) Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322 + EF+ +I + A+++E +R G+ ++P Q+EA+ ALGL++ +A RLV+LPQA+R Sbjct: 98 NSEFIFAFIGIGLCLGAYMSEDLRGGIRSIPTSQLEASRALGLSYLQAFRLVILPQAVRV 157 Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382 +P L + + L KN+SLA+ VG +L V + +QT + EI L +YL LS+++ Sbjct: 158 SMPALINHTVLLFKNTSLAMTVGAVELTYVTKEVESQTFRTFEIYLASTVMYLGLSLLLM 217 Query: 383 LFMNRLNAKIALKEK 397 F + +I ++ + Sbjct: 218 WFGAVIENRIRIRNR 232 >gi|145224166|ref|YP_001134844.1| polar amino acid ABC transporter, inner membrane subunit [Mycobacterium gilvum PYR-GCK] gi|315444501|ref|YP_004077380.1| amino acid ABC transporter membrane protein, PAAT family [Mycobacterium sp. Spyr1] gi|145216652|gb|ABP46056.1| amino acid ABC transporter membrane protein, PAAT family [Mycobacterium gilvum PYR-GCK] gi|315262804|gb|ADT99545.1| amino acid ABC transporter membrane protein, PAAT family [Mycobacterium sp. Spyr1] Length = 310 Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 68/191 (35%), Positives = 100/191 (52%), Gaps = 45/191 (23%) Query: 188 KIFVFSFVLGIVLSLFAT--RLSRHFHEKTGKALPLL----YISTFLIFGLPTLVLIALK 241 ++ V+S V+GIVL + T RLS + P+L ++ ++ G P V +A Sbjct: 74 QLTVYSMVIGIVLGVILTIMRLSSN---------PVLSSVAWVFLWIFRGTPVYVQLAFW 124 Query: 242 ------YQ------------LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283 YQ LHFD L +F F I L+ AA++AE Sbjct: 125 GLMPTIYQNIQLGVPFGPSLLHFD---LQDLSF--------PFALAVIGLALNEAAYMAE 173 Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343 IVR+G+ +VP GQ+EA+ ALG++ +A R +LPQAMR IIPP ++ ++LLK +SL A Sbjct: 174 IVRAGITSVPEGQLEASTALGMSWGRAMRRTVLPQAMRVIIPPTGNEVISLLKTTSLVTA 233 Query: 344 VGFA-DLVSVG 353 V +A DL S+ Sbjct: 234 VPYAFDLYSIA 244 >gi|291166921|gb|EFE28967.1| amino acid ABC transporter, permease protein [Filifactor alocis ATCC 35896] Length = 214 Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 50/180 (27%), Positives = 94/180 (52%), Gaps = 22/180 (12%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 ++ PLL + FL FGLP + PV+ S P F ++++A + Sbjct: 57 RSTPLLLQTMFLFFGLPLV-------------PVV--------SITLPRFTAIWLAFTLN 95 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 AA+ AEI R G+ ++P+GQ +AA LGL+ + R +++PQ ++ +P + ++ +NLLK Sbjct: 96 YAAYFAEIFRGGIQSIPKGQYQAAKVLGLSKKNTFRYIIVPQVIKITLPSVANEVINLLK 155 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 ++SL +G +D++ V ++ N + + + +Y L ++ + R+ K A E Sbjct: 156 DTSLVYILGMSDILKVAKSVSNTYASFVPYLFVAC-LYFILVFLLTFALERIEEKFAYYE 214 >gi|158334197|ref|YP_001515369.1| polar amino acid ABC transporter, permease protein [Acaryochloris marina MBIC11017] gi|158304438|gb|ABW26055.1| polar amino acid ABC transporter, permease protein [Acaryochloris marina MBIC11017] Length = 397 Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 49/132 (37%), Positives = 80/132 (60%), Gaps = 13/132 (9%) Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 L+ ++AA++AE VR GL ++P+GQ EAA ALGL LV+LPQA+RS+IP + Q+ Sbjct: 271 GLTLFSAAYLAENVRGGLQSIPQGQFEAAKALGLNPMLVLGLVVLPQALRSVIPAIVGQF 330 Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQT---GQAIEI-----ILIWMFIYLSLSIMIAL 383 + L K++SL +G +L V ++++Q G+ E+ +L W+F YL ++L Sbjct: 331 IGLFKDTSLLSIIGLVELTGVSRSVLSQPRFIGRHGEVYLFIGLLYWLFCYL-----MSL 385 Query: 384 FMNRLNAKIALK 395 RL ++ +K Sbjct: 386 GSRRLEHQLGVK 397 >gi|328958164|ref|YP_004375550.1| high affinity arginine ABC transporter [Carnobacterium sp. 17-4] gi|328674488|gb|AEB30534.1| high affinity arginine ABC transporter [Carnobacterium sp. 17-4] Length = 473 Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 61/204 (29%), Positives = 110/204 (53%), Gaps = 17/204 (8%) Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249 F + + G++L LF ++ + +I+T + L + LI L + ++F P Sbjct: 285 FAIATIFGVILGLFNASPNKVLN----------WIATIYVDILRGIPLIVLAFFIYFSIP 334 Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309 QF S P +++ I LS T A+IAE+VR G+ AV GQ+EA+ +LGLT+ Sbjct: 335 ---QFL----SIQIPAYIAGVITLSLNTTAYIAELVRGGIQAVDTGQLEASRSLGLTYNT 387 Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369 + R V+LPQA++ +IP +Q++ LK++S+ +G +L G II +T + ++ LI Sbjct: 388 SMRKVVLPQAVKIMIPSFINQFVITLKDTSILSVIGIVELTQTGKIIIARTYSSGDMWLI 447 Query: 370 WMFIYLSLSIMIALFMNRLNAKIA 393 +Y+ + ++ F N + + + Sbjct: 448 VGLMYIIIITILTKFSNYIERRTS 471 Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust. Identities = 26/70 (37%), Positives = 38/70 (54%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G T L ATI G ++G S NK++ WI +YV++ R IP +V+ FF+ Sbjct: 270 LLKGLGRTLLLTIISFAIATIFGVILGLFNASPNKVLNWIATIYVDILRGIPLIVLAFFI 329 Query: 149 YKSVLSVLPI 158 Y S+ L I Sbjct: 330 YFSIPQFLSI 339 >gi|313890203|ref|ZP_07823838.1| ABC transporter, permease protein [Streptococcus pseudoporcinus SPIN 20026] gi|313121564|gb|EFR44668.1| ABC transporter, permease protein [Streptococcus pseudoporcinus SPIN 20026] Length = 220 Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 67/214 (31%), Positives = 112/214 (52%), Gaps = 20/214 (9%) Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRH-FHEKTGKALPLLYISTFLIFGLPTLVLIAL 240 T+ +A F+ LG++L++ SRH F + K +Y+S ++ G+P +V++ Sbjct: 23 TIGISALSFLTGISLGVLLAILGR--SRHGFFRRIVK----VYVS--IMRGVPMIVVL-- 72 Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300 + L+F P FN P + YI S ++A+I+EI RS + AV GQ EAA Sbjct: 73 -FMLYFGMP---YFNL-----QLPALLCAYIGFSLVSSAYISEIFRSSINAVALGQWEAA 123 Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 ALGL ++ + V+LPQA+R IPPL + ++++K+SSLA + D+ + + Sbjct: 124 KALGLPQKRVIKKVILPQAIRIAIPPLGNVVIDMIKSSSLAAMITVPDIFQNAKIVGGRE 183 Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394 + + ++ FIY SL + F L K+ L Sbjct: 184 WDYMSMYILVAFIYWSLCYLFENFQAYLEHKLQL 217 >gi|315037375|ref|YP_004030943.1| glutamine ABC transporter substrate binding/permease protein [Lactobacillus amylovorus GRL 1112] gi|312275508|gb|ADQ58148.1| glutamine ABC transporter substrate binding/permease protein [Lactobacillus amylovorus GRL 1112] Length = 494 Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 66/202 (32%), Positives = 107/202 (52%), Gaps = 22/202 (10%) Query: 189 IFVFSFVLGIVLSLFAT--RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246 I VFS ++GIVL + RLSR+ K + + YI I G P +V I Y Sbjct: 301 ITVFSVLIGIVLGMLLALMRLSRN---KLLHWIAVCYIE--FIRGTPQMVQILFVY---- 351 Query: 247 DKPVLGQFNFIGGSTVS--PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304 F G+ +S ++ IA+ + A++AE +RSG+ +V +GQ EAA +LG Sbjct: 352 ---------FGVGALISNLSAVVAGIIAIGLNSGAYVAEDIRSGIASVAKGQTEAARSLG 402 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364 L+ KA R V++PQA+++I P L ++++ LLK+SSL +G +L+ I T + + Sbjct: 403 LSQAKAYRYVIIPQALKNIWPALGNEFITLLKDSSLVSVIGVTELMYQTELIQTSTYRGV 462 Query: 365 EIILIWMFIYLSLSIMIALFMN 386 + I M IY ++ + +N Sbjct: 463 LPLFIAMIIYFIMTFTLTRLLN 484 Score = 43.1 bits (100), Expect = 0.079, Method: Compositional matrix adjust. Identities = 31/106 (29%), Positives = 49/106 (46%), Gaps = 3/106 (2%) Query: 44 CVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSG 103 VN N +EK NL + +L A + + + + YA + G T + Sbjct: 249 AVNKTINRVEKKNL-INKEYLPAAAKYM--KTAQKTNTMAKYAPYFVKGVGYTLVITVFS 305 Query: 104 MIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 ++ ++G L+ RLS NKL+ WI Y+E R P +V I F+Y Sbjct: 306 VLIGIVLGMLLALMRLSRNKLLHWIAVCYIEFIRGTPQMVQILFVY 351 >gi|312115424|ref|YP_004013020.1| polar amino acid ABC transporter inner membrane protein [Rhodomicrobium vannielii ATCC 17100] gi|311220553|gb|ADP71921.1| polar amino acid ABC transporter, inner membrane subunit [Rhodomicrobium vannielii ATCC 17100] Length = 244 Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 48/129 (37%), Positives = 75/129 (58%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + L +T++ +A + + + ++PRGQ AA ALGLT R++ VLLP A R + P Sbjct: 109 FYTAAFGLGLFTSSRVAVQLAAAITSMPRGQKMAATALGLTTRQSYTNVLLPMAYRIVFP 168 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PLTS+ LNL+KNSS+A+ +G A+L + + T Q + IYL L+I I M Sbjct: 169 PLTSELLNLIKNSSVALTIGVAELTQSARNMDSYTFQTFQAFTAATLIYLVLNITITAVM 228 Query: 386 NRLNAKIAL 394 R+ +++ Sbjct: 229 RRIEHGVSV 237 >gi|229823498|ref|ZP_04449567.1| hypothetical protein GCWU000282_00796 [Catonella morbi ATCC 51271] gi|229786942|gb|EEP23056.1| hypothetical protein GCWU000282_00796 [Catonella morbi ATCC 51271] Length = 470 Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 51/159 (32%), Positives = 86/159 (54%), Gaps = 23/159 (14%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 + +PL+ +S F+ FG+P + + F V G LS Sbjct: 318 RGVPLIVLSFFIYFGIPQMTGV------RFSSAVAG-----------------ITTLSLN 354 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 AA++AEIVR G+ A+ +GQMEA+ +LGL++ K + ++LPQA++ +IP +Q++ LK Sbjct: 355 AAAYVAEIVRGGIQAIDKGQMEASRSLGLSYGKTMQKIILPQAIKLMIPSFINQFVITLK 414 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375 ++S+ +G +L G II +T Q+ + LI +YL Sbjct: 415 DTSILSVIGLVELTQTGSVIIARTYQSGSMWLIVGLMYL 453 Score = 37.7 bits (86), Expect = 3.4, Method: Compositional matrix adjust. Identities = 23/62 (37%), Positives = 38/62 (61%) Query: 88 AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147 A+L G T W+A + A I+G ++G R+ AN ++ I VYV++ R +P +V+ FF Sbjct: 269 ALLSGLGTTLWIALISVALALILGIILGLLRVQANPWLSGIAAVYVDLMRGVPLIVLSFF 328 Query: 148 LY 149 +Y Sbjct: 329 IY 330 >gi|222102914|ref|YP_002539953.1| ABC transporter membrane spanning protein (amino acid) [Agrobacterium vitis S4] gi|221739515|gb|ACM40248.1| ABC transporter membrane spanning protein (amino acid) [Agrobacterium vitis S4] Length = 250 Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 67/210 (31%), Positives = 109/210 (51%), Gaps = 20/210 (9%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF---GLPTLVLIALKYQLHFD 247 VFS L LS+ L+R +T L + TFL++ G+P L+LI Y F Sbjct: 37 VFSIALAFPLSILLA-LARMSKWRT-----LRWPVTFLVYVTRGVPLLMLILWCY---FL 87 Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307 P+L G+ V P F+++ L Y + F++E+VRSG++A+ GQMEAA ALG ++ Sbjct: 88 VPLLT------GADV-PSFITMLTTLVVYQSCFLSEVVRSGIVALGHGQMEAAKALGHSY 140 Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ-TGQAIEI 366 A R V+LPQA+ ++IP + S +++ +K+++L + DL + N Q ++ Sbjct: 141 PSAMRYVVLPQALYNVIPSILSTFVSTIKDTTLGSVINVPDLTFAANQVNNDLLTQPFQV 200 Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 LI IY + + RL I+ + Sbjct: 201 YLILALIYYVICWSLTHAAKRLEGSISRRR 230 >gi|187779364|ref|ZP_02995837.1| hypothetical protein CLOSPO_02960 [Clostridium sporogenes ATCC 15579] gi|187772989|gb|EDU36791.1| hypothetical protein CLOSPO_02960 [Clostridium sporogenes ATCC 15579] Length = 188 Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 50/159 (31%), Positives = 93/159 (58%), Gaps = 16/159 (10%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDK-PVLGQFNFIGGSTVSPEFMSLYIALSC 275 + P+L + +GLPT+ ++F + P+LG NF P+F + +ALS Sbjct: 21 RGTPVLVQLYIIYYGLPTI-------GINFPEVPILGS-NF-------PDFFAGILALSI 65 Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335 + A++AEI+R+G+ AV +GQMEAA +LG++ A + V++PQA ++I+P L ++++ ++ Sbjct: 66 NSGAYVAEIIRAGIQAVDKGQMEAARSLGMSESMAMKNVIIPQAFKNILPALGNEFITII 125 Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374 K SS+ +G +L+ T+ + E +L+ +Y Sbjct: 126 KESSIVSIIGIHELMYNADTVRGNIFKPFEPLLVAAVMY 164 >gi|241554154|ref|YP_002979367.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240863460|gb|ACS61122.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 252 Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 53/167 (31%), Positives = 92/167 (55%), Gaps = 11/167 (6%) Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290 G+P L+LI Y F P+L G+ V P F+++ L Y +AF++E+VR+G++ Sbjct: 74 GVPLLMLILWSY---FLVPLLT------GADV-PSFVTMLTTLVVYQSAFLSEVVRAGIV 123 Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 A+ GQM+A ALG + A R ++LPQA+ ++IP + S +++ +K+++L + DL Sbjct: 124 ALGPGQMDAGRALGHGYLGAMRFIILPQALYNMIPSIISTFVSTIKDTTLGYVINVPDLT 183 Query: 351 SVGGTIINQ-TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 + NQ Q ++ LI +Y ++ + F NRL I + Sbjct: 184 FAASQVNNQLLTQPFQVFLILAIVYFAICWTLTYFANRLERSITRRR 230 >gi|330816870|ref|YP_004360575.1| Polar amino acid ABC transporter, inner membrane subunit [Burkholderia gladioli BSR3] gi|327369263|gb|AEA60619.1| Polar amino acid ABC transporter, inner membrane subunit [Burkholderia gladioli BSR3] Length = 248 Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 70/219 (31%), Positives = 115/219 (52%), Gaps = 21/219 (9%) Query: 183 MDTNAKIFVFSFVLGIVLSLF--ATRLSRHFHEKTGKALPLLYISTF-LIF-GLPTLVLI 238 + T +F S V+G +LSL A R+SRH+ LP + + L+F G P L+ + Sbjct: 19 VPTTLGLFFLSLVIGGLLSLVIVAMRVSRHW-------LPNRFARAYILVFRGSPLLIQM 71 Query: 239 ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYI----ALSCYTAAFIAEIVRSGLIAVPR 294 L Y LG+F I S + P Y+ +L+ TA + AEI+R GL+AVP Sbjct: 72 FLVYY------GLGEFGVIRESFLWPVLREPYVCAVLSLALCTAGYTAEIIRGGLMAVPV 125 Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354 GQ+EA A+GL+ R V+ P A+R +P +++ + L+K+++LA V ++ V Sbjct: 126 GQIEAGYAIGLSGFSLLRRVIGPIALRQCLPAYSTEAVLLVKSTALASLVTVWEVTGVAQ 185 Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393 II QT + E+ + IYL L+ ++ + L +++ Sbjct: 186 QIIQQTYRTTEVFVCAALIYLFLNFVVVRLLGFLETRLS 224 >gi|319899107|ref|YP_004159200.1| glutamate/aspartate transport system permease protein GltJ [Bartonella clarridgeiae 73] gi|319403071|emb|CBI76626.1| glutamate/aspartate transport system permease protein GltJ [Bartonella clarridgeiae 73] Length = 250 Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 44/123 (35%), Positives = 76/123 (61%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P + + AL +T+A IAE +RSG+ ++P GQ AA+A+G ++ R ++LP+A+R+I Sbjct: 112 PPILLITCALGFFTSARIAEQIRSGIESIPSGQRYAAMAMGFNTYQSYRYIILPRAIRTI 171 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 +PPLTS+ + ++KNSS+A AV +L+ I + E L+ +Y+ +S+ I + Sbjct: 172 MPPLTSEAMGIVKNSSIAFAVSINELMQFQYQTIEEVSHVYENYLLVTILYILISLFIFV 231 Query: 384 FMN 386 M Sbjct: 232 IMT 234 >gi|300215129|gb|ADJ79545.1| Amino acid ABC transporter [Lactobacillus salivarius CECT 5713] Length = 499 Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 59/201 (29%), Positives = 105/201 (52%), Gaps = 22/201 (10%) Query: 194 FVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ 253 FVLGI+L+L R H K L + YI I G P +V + Y Sbjct: 316 FVLGIILALM-----RLGHNKLLHGLAVAYIE--FIRGTPLMVQVMFVY----------- 357 Query: 254 FNFIGGSTVS--PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311 F G+ + P + IA+S + A++AE++RSG+ ++ GQ EAA +LG++ ++ Sbjct: 358 --FGIGAVIQSLPALAAGIIAVSLNSGAYVAEVIRSGIESIAIGQTEAARSLGMSQKQTY 415 Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371 + V++PQA+++I P L ++++ L+K SS+ +G DL+ + + T + + + I M Sbjct: 416 QYVVIPQAIKNIWPALGNEFITLIKESSIVSVIGVGDLMYQTQLVQSATYKGVAPLAITM 475 Query: 372 FIYLSLSIMIALFMNRLNAKI 392 IY L+ ++ +N K+ Sbjct: 476 VIYFVLTFTLSKGLNYFEGKM 496 >gi|148926135|ref|ZP_01809821.1| putative glutamine transport system permease [Campylobacter jejuni subsp. jejuni CG8486] gi|145845614|gb|EDK22706.1| putative glutamine transport system permease [Campylobacter jejuni subsp. jejuni CG8486] Length = 261 Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 60/175 (34%), Positives = 97/175 (55%), Gaps = 16/175 (9%) Query: 221 LLYISTF---LIFGLPTLVLIALKYQLHFDKPVLGQFN-FIGGSTVSPEFMSLYIALSCY 276 L ++STF LI G P LV + L Y + + LG N ++ G I LSC+ Sbjct: 96 LRFLSTFYIELIRGTPLLVQVLLIYYIIANN--LGLDNRYVAG----------VIILSCF 143 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 +AA++AEI R+G++++ Q+E+A ALGL + V+ PQA+++I+ PL+ Q+ NL+K Sbjct: 144 SAAYLAEIFRAGILSISISQLESARALGLKEMQVFAYVIFPQALKNILAPLSGQFANLIK 203 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 +SSL + +L I + T +E +I YL L++ I++F L K Sbjct: 204 DSSLLSVIAVNELTQSAQEINSYTFATLEAYVILAITYLVLTLPISIFSRYLERK 258 Score = 37.7 bits (86), Expect = 3.1, Method: Compositional matrix adjust. Identities = 21/82 (25%), Positives = 42/82 (51%) Query: 68 AGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAW 127 F I +++ ++Y L GF+NT ++F ++ + I+G + A LS+ + + Sbjct: 39 CSFSISAYHFDFSAIATYKEKFLQGFLNTLVISFFSLLLSIILGGIFCAFSLSSIVFLRF 98 Query: 128 ICRVYVEVFRNIPPLVVIFFLY 149 + Y+E+ R P LV + +Y Sbjct: 99 LSTFYIELIRGTPLLVQVLLIY 120 >gi|57237748|ref|YP_178996.1| amino acid ABC transporter, permease protein PEB1 [Campylobacter jejuni RM1221] gi|86150652|ref|ZP_01068874.1| amino acid ABC transporter, permease protein PEB1 [Campylobacter jejuni subsp. jejuni CF93-6] gi|86151089|ref|ZP_01069305.1| amino acid ABC transporter, permease protein PEB1 [Campylobacter jejuni subsp. jejuni 260.94] gi|86152546|ref|ZP_01070751.1| amino acid ABC transporter, permease protein [Campylobacter jejuni subsp. jejuni HB93-13] gi|121612211|ref|YP_001000594.1| amino acid ABC transporter, permease protein PEB1 [Campylobacter jejuni subsp. jejuni 81-176] gi|157415177|ref|YP_001482433.1| amino acid ABC transporter permease [Campylobacter jejuni subsp. jejuni 81116] gi|167005525|ref|ZP_02271283.1| putative polar amino acid transport system permease protein [Campylobacter jejuni subsp. jejuni 81-176] gi|205356403|ref|ZP_03223168.1| putative ABC type amino-acid transporter permease protein [Campylobacter jejuni subsp. jejuni CG8421] gi|218562539|ref|YP_002344318.1| putative ABC-type amino-acid transporter permease [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|283956263|ref|ZP_06373743.1| amino acid ABC transporter, permease protein PEB1 [Campylobacter jejuni subsp. jejuni 1336] gi|315124413|ref|YP_004066417.1| putative ABC-type amino-acid transporter permease protein [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|57166552|gb|AAW35331.1| amino acid ABC transporter, permease protein PEB1 [Campylobacter jejuni RM1221] gi|85838913|gb|EAQ56180.1| amino acid ABC transporter, permease protein PEB1 [Campylobacter jejuni subsp. jejuni CF93-6] gi|85842259|gb|EAQ59505.1| amino acid ABC transporter, permease protein PEB1 [Campylobacter jejuni subsp. jejuni 260.94] gi|85843431|gb|EAQ60641.1| amino acid ABC transporter, permease protein [Campylobacter jejuni subsp. jejuni HB93-13] gi|87248890|gb|EAQ71853.1| amino acid ABC transporter, permease protein PEB1 [Campylobacter jejuni subsp. jejuni 81-176] gi|112360245|emb|CAL35040.1| putative ABC-type amino-acid transporter permease protein [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|157386141|gb|ABV52456.1| putative polar amino acid transport system permease protein [Campylobacter jejuni subsp. jejuni 81116] gi|205345788|gb|EDZ32426.1| putative ABC type amino-acid transporter permease protein [Campylobacter jejuni subsp. jejuni CG8421] gi|283791983|gb|EFC30772.1| amino acid ABC transporter, permease protein PEB1 [Campylobacter jejuni subsp. jejuni 1336] gi|284926153|gb|ADC28505.1| amino acid ABC transporter permease [Campylobacter jejuni subsp. jejuni IA3902] gi|307747818|gb|ADN91088.1| Amino acid ABC transporter, permease protein PEB1 [Campylobacter jejuni subsp. jejuni M1] gi|315018135|gb|ADT66228.1| putative ABC-type amino-acid transporter permease protein [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|315058359|gb|ADT72688.1| Putative ABC-type amino-acid transporter permease protein [Campylobacter jejuni subsp. jejuni S3] gi|315927530|gb|EFV06863.1| amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Campylobacter jejuni subsp. jejuni DFVF1099] gi|315930760|gb|EFV09765.1| amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Campylobacter jejuni subsp. jejuni 305] gi|315932599|gb|EFV11530.1| amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Campylobacter jejuni subsp. jejuni 327] Length = 250 Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 35/80 (43%), Positives = 61/80 (76%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + + Y A+++E+VRSG++AVPRGQ EA+ + G T+ + R +++PQ +R I+PP+T+Q Sbjct: 122 LGVGAYHGAYVSEVVRSGILAVPRGQFEASASQGFTYIQQMRYIIVPQTIRIILPPMTNQ 181 Query: 331 YLNLLKNSSLAVAVGFADLV 350 +NL+KN+S+ + VG A+L+ Sbjct: 182 MVNLIKNTSVLLIVGGAELM 201 Score = 44.3 bits (103), Expect = 0.034, Method: Compositional matrix adjust. Identities = 23/62 (37%), Positives = 39/62 (62%) Query: 88 AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147 A + GF+ T ++ ++ ATI GT+ G S K++ R+YVE+F+N+P ++ IFF Sbjct: 43 AFINGFIYTLEVSILALLIATIFGTIGGVMATSRFKIIRAYTRIYVELFQNVPLVIQIFF 102 Query: 148 LY 149 L+ Sbjct: 103 LF 104 >gi|317053832|ref|YP_004117857.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea sp. At-9b] gi|316951827|gb|ADU71301.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea sp. At-9b] Length = 214 Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 40/101 (39%), Positives = 66/101 (65%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + + LS Y A+IAE+ R+G+ AVP+GQ E + LGL+ R+ V+LPQ ++P Sbjct: 85 FAAGILGLSIYQGAYIAEVFRAGIEAVPKGQWEVSWILGLSKRQTFLSVILPQTRGIVLP 144 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 PL QYL+L+K++S+ +G ++L+ G I+++ GQ + I Sbjct: 145 PLVGQYLSLIKDTSIVSMIGMSELMHQGQAIVDRIGQPVVI 185 >gi|89053402|ref|YP_508853.1| amino acid ABC transporter permease [Jannaschia sp. CCS1] gi|88862951|gb|ABD53828.1| amino acid ABC transporter membrane protein, PAAT family [Jannaschia sp. CCS1] Length = 265 Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 44/135 (32%), Positives = 79/135 (58%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P IAL+ +AFIAE+ R+GL +V GQ+EAA ALGL R ++ PQA+R+I Sbjct: 131 PLLWRAVIALAIGYSAFIAEVFRAGLQSVDPGQIEAANALGLNRWNRFRHIIFPQAIRTI 190 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 +PPL + ++ ++K+SSL +G D+ +G + E + IYL++++ +++ Sbjct: 191 LPPLGNDFVAMVKDSSLVSVLGVLDVTQLGKVTAASNFRYFETYNVVALIYLTITVTLSI 250 Query: 384 FMNRLNAKIALKEKK 398 + R+ ++ E++ Sbjct: 251 LLRRMEKRMRQGERR 265 >gi|323356727|ref|YP_004223123.1| amino acid ABC transporter permease [Microbacterium testaceum StLB037] gi|323273098|dbj|BAJ73243.1| ABC-type amino acid transport system, permease component [Microbacterium testaceum StLB037] Length = 218 Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 46/102 (45%), Positives = 71/102 (69%), Gaps = 5/102 (4%) Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 AL YTA ++AE +RSG+ VP GQ EAA ALGLT + L++LPQA RS+IPP+ S + Sbjct: 94 ALGIYTATYVAEAIRSGVNTVPVGQAEAARALGLTFGQVMSLIVLPQAFRSVIPPMVSVF 153 Query: 332 LNLLKNSSLAVAVGFADLVSVGG--TIINQTGQAIEIILIWM 371 + LLKN++ VA GF+ +V++G +++ G+ I+++W+ Sbjct: 154 IALLKNTT--VAAGFS-IVNIGSVRNYLSERGENAFIVILWI 192 >gi|289627072|ref|ZP_06460026.1| glutamine ABC transporter, permease protein [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|330866807|gb|EGH01516.1| glutamine ABC transporter permease [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 482 Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 54/148 (36%), Positives = 87/148 (58%), Gaps = 4/148 (2%) Query: 232 LPTLVLIALKYQLHFDKP-VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290 +PTLV + L Y F P +L + + + S E++ IAL AA+ +E +RSGL Sbjct: 69 VPTLVQLMLWY---FGIPTLLTESTQLWLANYSTEYLFSVIALGLCQAAYFSEDIRSGLR 125 Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 A+P GQ+EA+ ALGL + ++ R V+LPQ +R+ +P L + + L KN+SL +A+G +L Sbjct: 126 AIPAGQVEASRALGLGYVRSMRYVILPQGVRNCLPSLINHTVLLFKNTSLVMAIGVVELT 185 Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLS 378 + N T + E L+ +YL++S Sbjct: 186 YATREVENYTFRTFEAYLVATVVYLAIS 213 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 42/133 (31%), Positives = 74/133 (55%), Gaps = 10/133 (7%) Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286 +++ G+P L++I Y F P+L N G F ++ L Y +A++ EI+R Sbjct: 305 YVMRGIPLLMVIFWTY---FLVPLLIGHNITG-------FTTMLCTLVVYQSAYLCEIIR 354 Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346 + A+P GQ EA+ ALG+ + + T V+LPQA+ + +P L SQ+++++K +SL + Sbjct: 355 GAIQALPAGQYEASRALGMGYMRTTVWVILPQALYNALPSLISQFISIIKETSLGYVINV 414 Query: 347 ADLVSVGGTIINQ 359 ++ I NQ Sbjct: 415 QEVTFAANQINNQ 427 >gi|218887770|ref|YP_002437091.1| binding-protein-dependent transporters inner membrane component [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218758724|gb|ACL09623.1| binding-protein-dependent transport systems inner membrane component [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 357 Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 47/129 (36%), Positives = 73/129 (56%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P F+S + L Y A+I EIVR+GL V RGQ EA+ + GLT R+ R V+LPQA R I Sbjct: 225 PVFLSGVVVLGLYEGAYITEIVRAGLEGVERGQWEASASTGLTRRQQLRHVILPQAFRLI 284 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 +PPL Q+++ +K+S++ + +L G ++ T EI L +YL L+ +L Sbjct: 285 VPPLAGQFISTIKDSAILSVISIRELTFQGMELMAATYLTFEIWLTVAALYLMLTFSCSL 344 Query: 384 FMNRLNAKI 392 + ++ Sbjct: 345 AARHVERRL 353 >gi|322388196|ref|ZP_08061800.1| amino acid ABC superfamily ATP binding cassette transporter, permease protein [Streptococcus infantis ATCC 700779] gi|321140868|gb|EFX36369.1| amino acid ABC superfamily ATP binding cassette transporter, permease protein [Streptococcus infantis ATCC 700779] Length = 227 Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 62/209 (29%), Positives = 113/209 (54%), Gaps = 19/209 (9%) Query: 195 VLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF---GLPTLVLIALKYQL-HFDKPV 250 +LG++L+ FA R K PL + + I+ G P +V I + + L H P Sbjct: 33 ILGVLLA-FAQR---------SKIKPLAWFANLYIWVFRGTPMMVQIMIAFALMHISAPT 82 Query: 251 LGQFNFIGGSTVS-PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309 + IG V + + +S + A+++E VR+G+ AVP+GQ+EAA +LG+ + Sbjct: 83 IQ----IGILDVDLTRLIPGILIISMNSGAYVSETVRAGINAVPKGQLEAAYSLGIRPKN 138 Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369 A R V+LPQA+++I+P L ++++ ++K+SSL A+G +L + T+ T + +L Sbjct: 139 AMRYVILPQAIKNILPSLGNEFITIIKDSSLLSAIGVMELWNGATTVSTTTYLPLTPLLF 198 Query: 370 WMFIYLSLSIMIALFMNRLNAKIALKEKK 398 F YL ++ ++ L + ++ +KK Sbjct: 199 AAFYYLIMTSILTLALKAFENRMGQGDKK 227 >gi|325526518|gb|EGD04078.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. TJI49] Length = 297 Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 68/232 (29%), Positives = 120/232 (51%), Gaps = 16/232 (6%) Query: 168 GMFLNNRGLSFPTLTMDTNAKIF-VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226 G FL R + LT N + V + LGIVL + T + R A+ YI Sbjct: 66 GQFLTARAI----LTGLGNTIVMTVLAMTLGIVLGVV-TAVMRLSSNPVLGAIAQGYI-- 118 Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLG-----QFNFIGGSTVSPEFMSLYIALSCYTAAFI 281 +L G P ++ + L + L P LG +F + V F++ + L A+ Sbjct: 119 WLFRGTPVILQLLLWFNLALVFPTLGIPGIAEFRTV---DVMTPFLAALLGLGINQGAYT 175 Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341 +E+VR+GL++V GQ EAA ++G+ +A R ++LPQAMR I+PP+ ++ + ++K +SLA Sbjct: 176 SEVVRAGLLSVDTGQYEAAKSIGMPRLQALRRIILPQAMRVIVPPIGNELIGMVKLTSLA 235 Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393 V +A+++ I + IE++++ YL++ +++L R+ + A Sbjct: 236 SVVQYAEMLHNAQNIYYANARVIELLIVAGIWYLAVVTVLSLAQARVERRFA 287 >gi|326318771|ref|YP_004236443.1| polar amino acid ABC transporter inner membrane subunit [Acidovorax avenae subsp. avenae ATCC 19860] gi|323375607|gb|ADX47876.1| polar amino acid ABC transporter, inner membrane subunit [Acidovorax avenae subsp. avenae ATCC 19860] Length = 222 Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 48/139 (34%), Positives = 84/139 (60%), Gaps = 1/139 (0%) Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315 F+ G + E MS I + AA+ +EI+R+G+ ++PRGQ+ A ALG+T+ + +LV+ Sbjct: 83 FLVGRPIGAE-MSAVITFIAFEAAYFSEIMRAGIQSIPRGQVFAGQALGMTYGQNMKLVI 141 Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375 LPQA R+++P L +Q + L +++SL A+G D++ T G+ IE L+ +Y Sbjct: 142 LPQAFRNMLPVLLTQTIILFQDTSLVYAIGAYDMLKGFETAGKNYGRPIEAYLLAAVVYF 201 Query: 376 SLSIMIALFMNRLNAKIAL 394 + ++ + RL+ KIA+ Sbjct: 202 IMCFALSSAVKRLHRKIAI 220 >gi|167031268|ref|YP_001666499.1| polar amino acid ABC transporter inner membrane subunit [Pseudomonas putida GB-1] gi|166857756|gb|ABY96163.1| polar amino acid ABC transporter, inner membrane subunit [Pseudomonas putida GB-1] Length = 222 Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 58/191 (30%), Positives = 104/191 (54%), Gaps = 20/191 (10%) Query: 214 KTGKALPL-----LYISTFLIFGLPTLVLIALKYQLHFDKPVLG-QFNFIGGSTVSPEFM 267 + K LPL +Y+S F G P LV + + ++F P +G + + I S Sbjct: 45 RLSKILPLNWLARVYVSFFR--GTPLLVQL---FVIYFGMPQIGIELDPIPAS------- 92 Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327 I LS AA+I EI+R+ + ++ RGQ EAA ++G+T +A R +LPQA+R+ +PPL Sbjct: 93 --LIGLSLNMAAYICEILRAAISSIDRGQWEAAASIGMTRVQAMRRAILPQALRTALPPL 150 Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387 + +++L+K+++LA + +L I +T + + + IY L ++A F NR Sbjct: 151 GNSFISLVKDTALAATIQVPELFRQAQLITARTFEVFTMYVAVAVIYWVLCSILAHFQNR 210 Query: 388 LNAKIALKEKK 398 + A++ +++ Sbjct: 211 MEARVNQHDQE 221 >gi|313668108|ref|YP_004048392.1| binding-protein-dependent transport systems hypothetical protein [Neisseria lactamica ST-640] gi|313005570|emb|CBN87006.1| putative binding-protein-dependent transport systems inner membrane protein [Neisseria lactamica 020-06] Length = 248 Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 45/121 (37%), Positives = 73/121 (60%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +AL + A+I EI R+G+ ++ +GQMEAA +LG+T+ +A R V+LPQA+R ++PPL S+ Sbjct: 122 LALIANSGAYICEIFRAGIQSIDKGQMEAARSLGMTYPQAMRYVILPQALRRMLPPLASE 181 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++ LLK+SSL + +L V TI + E + IYL ++ + RL Sbjct: 182 FITLLKDSSLLSVIAVPELSYVQKTITGRYSIYEEPLYTVALIYLLMTTFLGWIFLRLEK 241 Query: 391 K 391 + Sbjct: 242 R 242 >gi|308067187|ref|YP_003868792.1| ABC-type amino acid transport system, permease component [Paenibacillus polymyxa E681] gi|305856466|gb|ADM68254.1| ABC-type amino acid transport system, permease component [Paenibacillus polymyxa E681] Length = 216 Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 71/221 (32%), Positives = 115/221 (52%), Gaps = 37/221 (16%) Query: 181 LTMDTNAKIFVFSFVLGIVLSLFA-TRLS-----RHFHEKTGKALPLLYISTFLIFGLPT 234 LT++ VFSF LGI+ + TRL F + LPLL I F+ LP+ Sbjct: 21 LTLEVAIYSIVFSFALGILFGILRYTRLPVISQVAAFIIDLIRNLPLLLIIFFIGMVLPS 80 Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294 + G ++S ++ ++ LS + A IAEIVRSGL +V + Sbjct: 81 I-----------------------GISISIKWAAI-TGLSIFEGAMIAEIVRSGLNSVHK 116 Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS--- 351 GQ+EAA + GL++ + ++LPQA+R ++PP+ SQ+++L K++SLAV + +L Sbjct: 117 GQVEAARSSGLSYSQTLWHIILPQALRRMVPPIVSQFISLFKDTSLAVIISLPELTHNIQ 176 Query: 352 -VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 VGG NQ+ I +L F+Y +++ ++L RL + Sbjct: 177 IVGGQ--NQSF-VIPALLFAAFLYFAVNYSMSLIARRLEVR 214 >gi|218235175|ref|YP_002365195.1| putative amino acid ABC transporter, permease protein [Bacillus cereus B4264] gi|218163132|gb|ACK63124.1| putative amino acid ABC transporter, permease protein [Bacillus cereus B4264] Length = 230 Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 74/223 (33%), Positives = 117/223 (52%), Gaps = 19/223 (8%) Query: 177 SFPTLTMDT--NAKIFVFSFVLGIVLSL-FATRLSRHFHEKTGKALPLLYISTFLIFGLP 233 S+PTL T ++ + S VLG ++ L FA R + K ++ +YI+ +I G P Sbjct: 8 SYPTLLKATIVTLQLTLTSLVLGSLIGLLFA--FFRISNNKFLNSIAHVYIA--IIRGTP 63 Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293 +V IA+ Y F +P F + IAL+ + A+I EI R + +V Sbjct: 64 LIVQIAILY-----------FGITSVVVFTP-FWAGAIALAIHNGAYITEIFRGSIQSVD 111 Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353 RGQ+EAA +LG+ + A R ++LPQA R +PPL +Q++ LK+SSL VG ++L G Sbjct: 112 RGQLEAARSLGMPYPLAMRRIILPQAFRLSLPPLGNQFIIGLKDSSLVAYVGMSELWGSG 171 Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 +I Q ++ +I YL L ++ F+N L ++ KE Sbjct: 172 LSIAAGNFQQLDTYIIVGAYYLVLVLLFTYFVNLLENRLQRKE 214 Score = 37.0 bits (84), Expect = 6.1, Method: Compositional matrix adjust. Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 1/74 (1%) Query: 83 SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142 SSY T +L + T L + ++ ++IG L R+S NK + I VY+ + R P + Sbjct: 7 SSYPT-LLKATIVTLQLTLTSLVLGSLIGLLFAFFRISNNKFLNSIAHVYIAIIRGTPLI 65 Query: 143 VVIFFLYKSVLSVL 156 V I LY + SV+ Sbjct: 66 VQIAILYFGITSVV 79 >gi|116492898|ref|YP_804633.1| ABC-type amino acid transport system, permease and periplasmic component [Pediococcus pentosaceus ATCC 25745] gi|116103048|gb|ABJ68191.1| amino acid ABC transporter membrane protein, PAAT family / amino acid ABC transporter substrate-binding protein, PAAT family [Pediococcus pentosaceus ATCC 25745] Length = 488 Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 62/203 (30%), Positives = 107/203 (52%), Gaps = 23/203 (11%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 +F F+ G +L+L RLS + K + L Y+ + G P +V QL F Sbjct: 303 IFGFITGTLLALL--RLSDN---KVLRGLSAAYVE--FVRGTPLMV------QLMFVYFG 349 Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 LG F + P + IA+S + A++AE++R G+ +V GQ EAA +LGL R Sbjct: 350 LGLFVNL------PALTAGIIAVSLNSGAYVAEVIRGGINSVDDGQREAAESLGLNKRDR 403 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370 R V++PQA+++I P L +++++L+K SS+ +G DL+ + + T + + I++ Sbjct: 404 MRFVIMPQALKNIWPALGNEFISLIKESSIVSIIGVTDLIYQLKIVQSDTYRGVAPIVVA 463 Query: 371 MFIY----LSLSIMIALFMNRLN 389 M +Y SLS ++ + + N Sbjct: 464 MILYFVMTFSLSRLLKFYERKFN 486 Score = 36.2 bits (82), Expect = 9.1, Method: Compositional matrix adjust. Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 2/62 (3%) Query: 88 AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147 A+ VG+ T ++ G+I I GTL+ RLS NK++ + YVE R P +V + F Sbjct: 288 AMGVGY--TILISILGVIFGFITGTLLALLRLSDNKVLRGLSAAYVEFVRGTPLMVQLMF 345 Query: 148 LY 149 +Y Sbjct: 346 VY 347 >gi|90962512|ref|YP_536428.1| amino acid ABC transporter [Lactobacillus salivarius UCC118] gi|90821706|gb|ABE00345.1| Amino acid ABC transporter [Lactobacillus salivarius UCC118] Length = 499 Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 59/201 (29%), Positives = 105/201 (52%), Gaps = 22/201 (10%) Query: 194 FVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ 253 FVLGI+L+L R H K L + YI I G P +V + Y Sbjct: 316 FVLGIILALM-----RLGHNKLLHGLAVAYIE--FIRGTPLMVQVMFVY----------- 357 Query: 254 FNFIGGSTVS--PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311 F G+ + P + IA+S + A++AE++RSG+ ++ GQ EAA +LG++ ++ Sbjct: 358 --FGIGAVIQSLPALAAGIIAVSLNSGAYVAEVIRSGIESIAIGQTEAARSLGMSQKQTY 415 Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371 + V++PQA+++I P L ++++ L+K SS+ +G DL+ + + T + + + I M Sbjct: 416 QYVVIPQAIKNIWPALGNEFITLIKESSIVSVIGVGDLMYQTQLVQSATYKGVAPLAITM 475 Query: 372 FIYLSLSIMIALFMNRLNAKI 392 IY L+ ++ +N K+ Sbjct: 476 VIYFVLTFTLSKGLNYFEGKM 496 >gi|289627333|ref|ZP_06460287.1| amino acid ABC transporter permease [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289650580|ref|ZP_06481923.1| amino acid ABC transporter permease [Pseudomonas syringae pv. aesculi str. 2250] gi|330870381|gb|EGH05090.1| amino acid ABC transporter permease [Pseudomonas syringae pv. aesculi str. 0893_23] gi|330892337|gb|EGH24998.1| amino acid ABC transporter permease [Pseudomonas syringae pv. mori str. 301020] Length = 229 Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 66/191 (34%), Positives = 102/191 (53%), Gaps = 17/191 (8%) Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239 TLT++ A + +L I + + R SRH+ + ALP YI F G P LV + Sbjct: 18 TLTLELVAIAVIAGLILAIPMGI--ARASRHWPVR---ALPYAYI--FFFRGTPLLVQLF 70 Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295 L Y L QF + S + P F + ++ +TAA+IAEI+R + AVP G Sbjct: 71 LVYY------GLAQFESVRQSALWPYLRDPFWCAVVTMTLHTAAYIAEILRGAIQAVPVG 124 Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355 ++EAA ALG++ KA ++LP+A R +P +++ + +LK S+LA V +L + T Sbjct: 125 EVEAARALGMSKWKALFYIVLPRAARIGLPAYSNEVILMLKASALASTVTLLELTGMART 184 Query: 356 IINQTGQAIEI 366 II +T +EI Sbjct: 185 IIARTYLPVEI 195 >gi|169829527|ref|YP_001699685.1| polar amino acid transport system permease [Lysinibacillus sphaericus C3-41] gi|168994015|gb|ACA41555.1| polar amino acid transport system permease protein [Lysinibacillus sphaericus C3-41] Length = 234 Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 67/208 (32%), Positives = 112/208 (53%), Gaps = 15/208 (7%) Query: 179 PTLT--MDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV 236 PTL + A+I VFS + GIVL + + + + K + +YIS I G P LV Sbjct: 15 PTLLQYLPVTAEILVFSIIFGIVLGIMLA-IPKLLNVALLKQIITIYIS--FIRGTPILV 71 Query: 237 LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT---AAFIAEIVRSGLIAVP 293 + L + + P L +F I + + ++Y + YT AA AEI R+ ++ V Sbjct: 72 QLFLVF---YGVPALLKFIHIDVTRLD----AMYFVIITYTLSNAAAFAEIFRAAILTVD 124 Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353 RGQ+EAA ++GL +A ++ PQA+R P + + ++ LK++SLA ++G D+V G Sbjct: 125 RGQIEAAFSVGLNGPQAFLRIVFPQAIRVAFPNIANTMISSLKDTSLAFSIGVMDMVGRG 184 Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMI 381 T+I T +A EI + +Y ++ I++ Sbjct: 185 ETLIASTTRAFEIYVALSIVYFAIVIIL 212 >gi|282902328|ref|ZP_06310221.1| amino acid ABC transporter, permease protein [Staphylococcus aureus subsp. aureus C160] gi|282596787|gb|EFC01746.1| amino acid ABC transporter, permease protein [Staphylococcus aureus subsp. aureus C160] Length = 239 Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 58/198 (29%), Positives = 118/198 (59%), Gaps = 10/198 (5%) Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248 I + +FVLG++++LF T L R K +++ +Y+S +I G P +V + + + + Sbjct: 34 ITLVTFVLGLIIALF-TALMRISTSKVLRSIARVYVS--IIRGTPMIVQL---FIIFYGI 87 Query: 249 PVLGQF---NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305 P LG+ + T++P ++ I LS A+ +EI+R G+I++P+GQ EAA ++G+ Sbjct: 88 PELGRLLTNDADNQWTLAPVVAAI-IGLSLNVGAYASEIIRGGIISIPKGQTEAAYSIGM 146 Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365 T+R+ + ++LPQA+R IP L + +L+L+K++SL + A++ +++ T + + Sbjct: 147 TYRQTIQRIILPQAIRVSIPALGNTFLSLIKDTSLLGFILVAEMFRKAQEVVSTTYEYLT 206 Query: 366 IILIWMFIYLSLSIMIAL 383 I ++ +Y + +I++ Sbjct: 207 IYVLVALMYWVVCFIISI 224 >gi|227891436|ref|ZP_04009241.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus salivarius ATCC 11741] gi|227866583|gb|EEJ74004.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus salivarius ATCC 11741] Length = 501 Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 59/201 (29%), Positives = 105/201 (52%), Gaps = 22/201 (10%) Query: 194 FVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ 253 FVLGI+L+L R H K L + YI I G P +V + Y Sbjct: 318 FVLGIILALM-----RLGHNKLLHGLAVAYIE--FIRGTPLMVQVMFVY----------- 359 Query: 254 FNFIGGSTVS--PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311 F G+ + P + IA+S + A++AE++RSG+ ++ GQ EAA +LG++ ++ Sbjct: 360 --FGIGAVIQSLPALAAGIIAVSLNSGAYVAEVIRSGIESIAIGQTEAARSLGMSQKQTY 417 Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371 + V++PQA+++I P L ++++ L+K SS+ +G DL+ + + T + + + I M Sbjct: 418 QYVVIPQAIKNIWPALGNEFITLIKESSIVSVIGVGDLMYQTQLVQSATYKGVAPLAITM 477 Query: 372 FIYLSLSIMIALFMNRLNAKI 392 IY L+ ++ +N K+ Sbjct: 478 VIYFVLTFTLSKGLNYFEGKM 498 >gi|91778559|ref|YP_553767.1| polar amino acid ABC transporter inner membrane protein [Burkholderia xenovorans LB400] gi|91691219|gb|ABE34417.1| amino acid ABC transporter membrane protein 1, PAAT family [Burkholderia xenovorans LB400] Length = 246 Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 54/131 (41%), Positives = 74/131 (56%), Gaps = 4/131 (3%) Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKP-VLGQFNFIGGSTVSPEFMSLYIALSCYTA 278 PLL F FG TL + + + P VLG F S E + ++ L+CY+ Sbjct: 67 PLLVQLLFWYFGAATL--LPQPWMTWLNTPHVLGAAPF-ALHWPSFELFAGWLGLTCYST 123 Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338 AFIAE R+G+ V Q +A ALG+T R V+LPQA+R PPL QY+N++KNS Sbjct: 124 AFIAEEFRAGIRGVGIAQYQAGAALGMTRYTTLRHVILPQAVRIATPPLAGQYMNIVKNS 183 Query: 339 SLAVAVGFADL 349 SL +A+G A+L Sbjct: 184 SLTMAIGVAEL 194 Score = 40.4 bits (93), Expect = 0.55, Method: Compositional matrix adjust. Identities = 26/78 (33%), Positives = 41/78 (52%) Query: 82 DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141 D Y + GF+ T L+ + AT++G + +++ + VA R+YV VFRN P Sbjct: 9 DPRYLGWLAHGFLITLVLSACVSVCATLLGFGLAMAQIAQQRSVAAAARLYVLVFRNSPL 68 Query: 142 LVVIFFLYKSVLSVLPIP 159 LV + F Y ++LP P Sbjct: 69 LVQLLFWYFGAATLLPQP 86 >gi|17546978|ref|NP_520380.1| amino acid ABC transporter transmembrane protein [Ralstonia solanacearum GMI1000] gi|17429279|emb|CAD15966.1| probable amino acid transmembrane abc transporter protein [Ralstonia solanacearum GMI1000] Length = 230 Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 41/92 (44%), Positives = 66/92 (71%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 +F ++ AL + AA++AEIVR+G+ A+PRGQME+A +LGL + +A RLVLLPQA+R+++ Sbjct: 94 QFNTMLTALVVFDAAYLAEIVRAGIQALPRGQMESARSLGLPYLQAMRLVLLPQALRNML 153 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356 P L +Q ++ +K +SL + ++ V G I Sbjct: 154 PSLVNQLVSTIKETSLGYIISLPEVSFVAGQI 185 >gi|171319193|ref|ZP_02908312.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria MEX-5] gi|171095621|gb|EDT40582.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria MEX-5] Length = 297 Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 61/205 (29%), Positives = 109/205 (53%), Gaps = 5/205 (2%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 V + LGIVL + T + R A+ YI +L G P ++ + L + L P Sbjct: 86 VLAMTLGIVLGVV-TAVMRLSSNPVLGAIAQGYI--WLFRGTPVILQLLLWFNLALVFPT 142 Query: 251 LGQFNFIGGSTVS--PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308 LG TV F++ + L A+ +E+VR+GL++V GQ EAA ++G+ Sbjct: 143 LGIPGIAEYRTVDVMTPFLAAVLGLGINQGAYTSEVVRAGLLSVDTGQYEAAKSIGMARL 202 Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368 +A R ++LPQAMR I+PP+ ++ + ++K +SLA V +A+++ I + IE+++ Sbjct: 203 QALRRIILPQAMRVIVPPIGNELIGMVKLTSLASVVQYAEMLHNAQNIYYANARVIELLI 262 Query: 369 IWMFIYLSLSIMIALFMNRLNAKIA 393 + YL++ +++L R+ + A Sbjct: 263 VAGIWYLAVVTVLSLAQARVERRFA 287 >gi|296332721|ref|ZP_06875181.1| cystine ABC transporter (permease) [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305673066|ref|YP_003864738.1| cystine ABC transporter permease [Bacillus subtilis subsp. spizizenii str. W23] gi|296150001|gb|EFG90890.1| cystine ABC transporter (permease) [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305411310|gb|ADM36429.1| cystine ABC transporter (permease) [Bacillus subtilis subsp. spizizenii str. W23] Length = 234 Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 68/209 (32%), Positives = 113/209 (54%), Gaps = 21/209 (10%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 + SF+ G++L+L T L+R + + + +Y+S I G P LV + + + L Sbjct: 40 ILSFIFGMILALI-TALARMSKVRPLRWVFSVYVSA--IRGTPLLVQLFIIFYL------ 90 Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 FN T+ P F S IA S A+ +EI+R+ +++VP+GQ EA +G+TH+K Sbjct: 91 FPAFNI----TLDP-FPSAVIAFSLNVGAYASEIIRASILSVPKGQWEAGYTIGMTHQKT 145 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI- 369 V+LPQA R IPPL++ +++L+K++SLA + A+L I + I +I I Sbjct: 146 LFRVILPQAFRVSIPPLSNTFISLIKDTSLASQILVAELFRKAQEIGARNLDQILVIYIE 205 Query: 370 -----WMFIYLSLSIMIALFMNRLNAKIA 393 WM +L LS++ + RL+ +A Sbjct: 206 AAFIYWMICFL-LSLVQHVIERRLDRYVA 233 >gi|293605797|ref|ZP_06688170.1| glutamate/aspartate ABC superfamily ATP binding cassette transporter, membrane protein [Achromobacter piechaudii ATCC 43553] gi|292815792|gb|EFF74900.1| glutamate/aspartate ABC superfamily ATP binding cassette transporter, membrane protein [Achromobacter piechaudii ATCC 43553] Length = 229 Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 59/168 (35%), Positives = 90/168 (53%), Gaps = 14/168 (8%) Query: 243 QLHFDKPVLGQ--FNFIGGSTVSPEFMSLY------------IALSCYTAAFIAEIVRSG 288 + H + P+L Q F + G + PE + L+ IAL+ +AA+IAE +RSG Sbjct: 57 EYHRNVPLLVQVLFWYFGMPELLPEGLRLWLYDHNAEMSLAAIALALGSAAYIAEDIRSG 116 Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348 L A+P Q EAA ALG ++ + R V++PQA+R IPPL + L L KN+S+A+A+G + Sbjct: 117 LRAIPWTQFEAARALGASYLQCMRYVIVPQALRISIPPLVGRALLLFKNTSVAMAIGVME 176 Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 L I N+T + +YL S +I +R+ A+ L Sbjct: 177 LTYQAREIENETYRTFATFGAATIMYLLGSFLIMAVGSRIYARYRLNR 224 >gi|269965300|ref|ZP_06179421.1| putative amino acid ABC transporter, permease protein [Vibrio alginolyticus 40B] gi|269830101|gb|EEZ84329.1| putative amino acid ABC transporter, permease protein [Vibrio alginolyticus 40B] Length = 246 Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 46/128 (35%), Positives = 73/128 (57%), Gaps = 23/128 (17%) Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289 +G+PTL+ ++L + F + IAL+ +AF+AE+ R G+ Sbjct: 102 YGMPTLLDVSLNH-----------------------FWAGVIALTIAESAFMAEVFRGGI 138 Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349 A+ RGQ EAA +LGL++ + RLV+LPQA R I+PPL +Q++ +LK SSL +G +DL Sbjct: 139 QAISRGQHEAAESLGLSYWQKMRLVILPQAFRQILPPLGNQFVYILKMSSLVSVIGLSDL 198 Query: 350 VSVGGTII 357 ++ Sbjct: 199 TRRANELV 206 >gi|33592313|ref|NP_879957.1| amino acids ABC transporter, permease protein [Bordetella pertussis Tohama I] gi|33596426|ref|NP_884069.1| amino acids ABC transporter, permease protein [Bordetella parapertussis 12822] gi|33602283|ref|NP_889843.1| amino acids ABC transporter, permease protein [Bordetella bronchiseptica RB50] gi|33566195|emb|CAE37101.1| amino acids ABC transporter, permease protein [Bordetella parapertussis] gi|33571958|emb|CAE41479.1| amino acids ABC transporter, permease protein [Bordetella pertussis Tohama I] gi|33576722|emb|CAE33800.1| amino acids ABC transporter, permease protein [Bordetella bronchiseptica RB50] Length = 229 Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 74/232 (31%), Positives = 116/232 (50%), Gaps = 25/232 (10%) Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLF-----ATRLS--RHF---HEKTGKAL 219 FL+ LS M T ++F+ ++VL L++ T L+ R F + + + + Sbjct: 3 FLDAHYLSQLADGMMTTVQLFLVAWVLAFTLAVLLVVIRTTNLAPCRWFVDAYVEYHRNV 62 Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279 PLL F FG+P L+ ++ L+ Q N E IAL +AA Sbjct: 63 PLLVQVLFWYFGMPELLPEGVRGWLY-------QHN--------AELSLAAIALGLGSAA 107 Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339 +IAE +RSGL A+P Q EAA ALG ++ + R V++PQA+R IPPL + L L KN+S Sbjct: 108 YIAEDIRSGLRAIPGTQFEAARALGSSYLQCMRHVIVPQALRISIPPLVGRALLLFKNTS 167 Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 +A+A+G +L I N+T + +YL S ++ +R+ A+ Sbjct: 168 VAMAIGVVELTYQAREIENETYRTFATFGAATLMYLLGSFLLMFIGSRVYAR 219 >gi|121601784|ref|YP_988958.1| glutamate/aspartate ABC transporter, permease protein GltJ [Bartonella bacilliformis KC583] gi|121602217|ref|YP_988989.1| glutamate/aspartate ABC transporter, permease protein GltJ [Bartonella bacilliformis KC583] gi|120613961|gb|ABM44562.1| glutamate/aspartate ABC transporter, permease protein GltJ [Bartonella bacilliformis KC583] gi|120614394|gb|ABM44995.1| glutamate/aspartate ABC transporter, permease protein GltJ [Bartonella bacilliformis KC583] Length = 250 Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 43/114 (37%), Positives = 74/114 (64%) Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 AL +T+A IAE VRSG+ ++P GQ AA+A+G T ++ R +++P+A+R+I+PPLTS+ Sbjct: 120 ALGFFTSARIAEQVRSGIESIPSGQRYAAMAIGFTTYQSYRYIMIPRAIRTILPPLTSEA 179 Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 + ++KNSS+A AV +L+ I + E ++ +Y+ +S+ I + M Sbjct: 180 MGIVKNSSIAFAVSIHELMQFQYQTIEEVSHVYENYMLVTILYIIISLFIFVMM 233 Score = 40.8 bits (94), Expect = 0.34, Method: Compositional matrix adjust. Identities = 28/79 (35%), Positives = 40/79 (50%), Gaps = 5/79 (6%) Query: 84 SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLV-----AWICRVYVEVFRN 138 +Y +L GF NT L+ S +I A +G ++G R N V I ++VE+ RN Sbjct: 28 TYLDTLLDGFKNTAVLSISSLILAVFVGVVIGTVRTLPNTSVINNTFRAIGGIWVEIMRN 87 Query: 139 IPPLVVIFFLYKSVLSVLP 157 IP LV +F Y V + P Sbjct: 88 IPLLVQVFLWYFVVPKIYP 106 >gi|242279196|ref|YP_002991325.1| polar amino acid ABC transporter inner membrane subunit [Desulfovibrio salexigens DSM 2638] gi|242122090|gb|ACS79786.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio salexigens DSM 2638] Length = 260 Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 46/130 (35%), Positives = 78/130 (60%), Gaps = 4/130 (3%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P+ +S IA+S A++ E+ R+G+ ++ GQ EAA +LG ++ LV+LPQA R+I Sbjct: 127 PDMLSAIIAMSVCYGAYMGEVFRAGIESIDDGQTEAARSLGFNKKETMFLVILPQAWRTI 186 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE----IILIWMFIYLSLSI 379 +PP+ ++++ LLK+SSL + AD++ G ++ Q E I L+++ I L LS Sbjct: 187 LPPVGNEFIALLKDSSLVSILAVADILRRGREFAAESFQYFETYTMIALVYLLITLILSR 246 Query: 380 MIALFMNRLN 389 ++ RLN Sbjct: 247 AVSHMEERLN 256 Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 29/69 (42%), Positives = 41/69 (59%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151 G V TF + + A IIG G GR+S+NK + + YVEV R IP LV +F++Y + Sbjct: 60 GIVVTFEVTICSIFGALIIGLFTGLGRISSNKFINLVASTYVEVVRGIPLLVQLFYIYYA 119 Query: 152 VLSVLPIPD 160 + VL +PD Sbjct: 120 MGRVLQVPD 128 >gi|317506457|ref|ZP_07964258.1| inner membrane transporter [Segniliparus rugosus ATCC BAA-974] gi|316255218|gb|EFV14487.1| inner membrane transporter [Segniliparus rugosus ATCC BAA-974] Length = 275 Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 48/122 (39%), Positives = 74/122 (60%), Gaps = 8/122 (6%) Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291 +P L+L+ YQL V ST P ++ LS Y A I EI+R+GL A Sbjct: 117 VPVLILMIFAYQLFSRYAVFP-------STQVP-LAAVVFGLSVYNGALIGEILRAGLAA 168 Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 +P+GQ EAA+A+GLT + RL+LLPQA+ +++P L SQ + +LK+++L +G+ +L+ Sbjct: 169 LPKGQSEAAVAVGLTKGQTVRLILLPQAVAAMLPALISQMVVVLKDAALGYQIGYIELIR 228 Query: 352 VG 353 G Sbjct: 229 SG 230 Score = 36.2 bits (82), Expect = 9.9, Method: Compositional matrix adjust. Identities = 25/78 (32%), Positives = 44/78 (56%), Gaps = 7/78 (8%) Query: 104 MIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYK--SVLSVLP---I 158 ++ A ++GT + G +S +LV V VE FR++P L+++ F Y+ S +V P + Sbjct: 82 IVVALLVGTALAVGMISDRRLVRTAATVAVEAFRSVPVLILMIFAYQLFSRYAVFPSTQV 141 Query: 159 PDHSIVLPFGMFLNNRGL 176 P ++V FG+ + N L Sbjct: 142 PLAAVV--FGLSVYNGAL 157 >gi|300865206|ref|ZP_07110024.1| polar amino acid ABC transporter, inner membrane subunit [Oscillatoria sp. PCC 6506] gi|300336797|emb|CBN55174.1| polar amino acid ABC transporter, inner membrane subunit [Oscillatoria sp. PCC 6506] Length = 398 Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 62/190 (32%), Positives = 102/190 (53%), Gaps = 22/190 (11%) Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252 SF LG++L+L R K +LYI ++ GLP + ++ F V+ Sbjct: 205 SFPLGVLLAL-----GRQSSLPVVKYFSILYIE--IVRGLPLIGIL-------FLGQVML 250 Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312 QF G+ + AL+ ++AA++AE VR GL +VPRGQ+EAA +LGL Sbjct: 251 QFFLPPGAPKLDRLVRAIAALTLFSAAYLAENVRGGLQSVPRGQIEAARSLGLNTPLVIL 310 Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ---TGQAIEI--- 366 L++LPQA+R++IP + Q++ L K++SL G +LV + T++ +G+ E+ Sbjct: 311 LIVLPQALRAVIPAIVGQFIGLFKDTSLLSLFGILELVGISRTVLANPAYSGRYAEVYVF 370 Query: 367 --ILIWMFIY 374 ++ W+F Y Sbjct: 371 IGVIYWVFCY 380 >gi|88596128|ref|ZP_01099365.1| amino acid ABC transporter, permease protein PEB1 [Campylobacter jejuni subsp. jejuni 84-25] gi|88190969|gb|EAQ94941.1| amino acid ABC transporter, permease protein PEB1 [Campylobacter jejuni subsp. jejuni 84-25] Length = 250 Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 35/80 (43%), Positives = 61/80 (76%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + + Y A+++E+VRSG++AVPRGQ EA+ + G T+ + R +++PQ +R I+PP+T+Q Sbjct: 122 LGVGVYHGAYVSEVVRSGILAVPRGQFEASASQGFTYIQQMRYIIVPQTIRIILPPMTNQ 181 Query: 331 YLNLLKNSSLAVAVGFADLV 350 +NL+KN+S+ + VG A+L+ Sbjct: 182 MVNLIKNTSVLLIVGGAELM 201 Score = 44.3 bits (103), Expect = 0.033, Method: Compositional matrix adjust. Identities = 23/62 (37%), Positives = 39/62 (62%) Query: 88 AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147 A + GF+ T ++ ++ ATI GT+ G S K++ R+YVE+F+N+P ++ IFF Sbjct: 43 AFINGFIYTLEVSILALLIATIFGTIGGVMATSRFKIIRAYTRIYVELFQNVPLVIQIFF 102 Query: 148 LY 149 L+ Sbjct: 103 LF 104 >gi|150398177|ref|YP_001328644.1| polar amino acid ABC transporter inner membrane subunit [Sinorhizobium medicae WSM419] gi|150029692|gb|ABR61809.1| polar amino acid ABC transporter, inner membrane subunit [Sinorhizobium medicae WSM419] Length = 223 Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 44/93 (47%), Positives = 65/93 (69%), Gaps = 1/93 (1%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G +SP F+S +LS +AA+ AEI R+G+ A+P GQ EA+ ALGL++R V+LPQ Sbjct: 87 GIRLSP-FLSAVTSLSLVSAAYTAEIFRAGIEAIPHGQFEASAALGLSNRHTMVDVILPQ 145 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 A+R +IPPLT+ +N+LK+++LA V DL+ Sbjct: 146 AVRIVIPPLTNNCINVLKDTALASVVAMPDLLK 178 >gi|29829525|ref|NP_824159.1| arginine/ornithine transport permease [Streptomyces avermitilis MA-4680] gi|29606633|dbj|BAC70694.1| putative arginine/ornithine ABC transport permease [Streptomyces avermitilis MA-4680] Length = 312 Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 42/117 (35%), Positives = 71/117 (60%), Gaps = 3/117 (2%) Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 AA++AEI R+GL++V GQ EA+ ALG++H K R +++PQAMR I+PP ++ +N+LK Sbjct: 167 AAYMAEICRAGLLSVDEGQTEASHALGMSHNKTLRRIVIPQAMRVIVPPTGNEVINMLKT 226 Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILI---WMFIYLSLSIMIALFMNRLNAK 391 +SL V + +L I +G +E++ + W I S+ + ++ R A+ Sbjct: 227 TSLVSVVQYPELFRYAQDIGQTSGAPVEMLFLAAAWYLIMTSVLSIGQYYVERYYAR 283 >gi|86150643|ref|ZP_01068865.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Campylobacter jejuni subsp. jejuni CF93-6] gi|88596538|ref|ZP_01099775.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Campylobacter jejuni subsp. jejuni 84-25] gi|205356665|ref|ZP_03223426.1| putative glutamine transport system permease [Campylobacter jejuni subsp. jejuni CG8421] gi|218562559|ref|YP_002344338.1| putative glutamine transport system permease [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|85838904|gb|EAQ56171.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Campylobacter jejuni subsp. jejuni CF93-6] gi|88191379|gb|EAQ95351.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Campylobacter jejuni subsp. jejuni 84-25] gi|112360265|emb|CAL35060.1| putative glutamine transport system permease [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|205345403|gb|EDZ32045.1| putative glutamine transport system permease [Campylobacter jejuni subsp. jejuni CG8421] gi|284926173|gb|ADC28525.1| amino acid ABC transporter permease [Campylobacter jejuni subsp. jejuni IA3902] gi|315927897|gb|EFV07220.1| amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Campylobacter jejuni subsp. jejuni DFVF1099] gi|315929286|gb|EFV08498.1| amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Campylobacter jejuni subsp. jejuni 305] Length = 261 Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 44/121 (36%), Positives = 74/121 (61%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I LSC++AA++AEI R+G++++ Q+E+A ALGL + V+ PQA+++I+ PL+ Q Sbjct: 138 IILSCFSAAYLAEIFRAGILSISISQLESARALGLKEMQVFAYVIFPQALKNILAPLSGQ 197 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 + NL+K+SSL + +L I + T +E +I YL L++ I++F L Sbjct: 198 FANLIKDSSLLSVIAVNELTQSAQEINSYTFATLEAYVILAITYLVLTLPISIFSRYLER 257 Query: 391 K 391 K Sbjct: 258 K 258 Score = 37.4 bits (85), Expect = 4.4, Method: Compositional matrix adjust. Identities = 21/82 (25%), Positives = 42/82 (51%) Query: 68 AGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAW 127 F I +++ ++Y L GF+NT ++F ++ + I+G + A LS+ + + Sbjct: 39 CSFSISAYHFDFSAIATYKEKFLQGFLNTLIISFFSLLLSIILGGVFCAFSLSSIVFLRF 98 Query: 128 ICRVYVEVFRNIPPLVVIFFLY 149 + Y+E+ R P LV + +Y Sbjct: 99 LSTFYIELVRGTPLLVQVLLIY 120 >gi|293605348|ref|ZP_06687733.1| general amino acid ABC superfamily ATP binding cassette transporter, permease protein [Achromobacter piechaudii ATCC 43553] gi|292816287|gb|EFF75383.1| general amino acid ABC superfamily ATP binding cassette transporter, permease protein [Achromobacter piechaudii ATCC 43553] Length = 367 Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 63/179 (35%), Positives = 98/179 (54%), Gaps = 18/179 (10%) Query: 172 NNRGLSFP-TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230 N+R P TL + T F+F +G++L+L R KAL ++YI LI Sbjct: 154 NSRWGGLPLTLILATFG--IAFAFPIGVLLAL-----GRRSKMPAIKALCVVYIE--LIR 204 Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290 G+P + L+ F V+ G T+ + + IA+ + AA+IAE VR GL Sbjct: 205 GVPLISLL-------FMSSVMLPLFLPEGFTID-KLLRAQIAIIMFAAAYIAETVRGGLQ 256 Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349 A+P+GQ E A +LGL + + R ++LPQA++ +IPPL +++L K++SL V +G DL Sbjct: 257 AIPKGQYEGADSLGLNYWQQMRKIILPQALKIVIPPLVGIFISLFKDTSLVVIIGIFDL 315 >gi|15614025|ref|NP_242328.1| ABC transporter (permease) [Bacillus halodurans C-125] gi|10174079|dbj|BAB05181.1| ABC transporter (permease) [Bacillus halodurans C-125] Length = 218 Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 74/237 (31%), Positives = 121/237 (51%), Gaps = 32/237 (13%) Query: 160 DHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFAT---RLSRHFHEKTG 216 D S + PF F+ L +T+ + +F VLGIVL++F RL R F + Sbjct: 4 DFSRIQPFMPFM----LEGVWVTLQFVSVSLLFGLVLGIVLAIFKISKYRLFRWFAD--- 56 Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 Y S F G P ++ + + Y L QF G +S +F + ++A Sbjct: 57 -----FYTSIFR--GTPLILQLLMIYL------ALPQF----GVDIS-QFQAAFLAFGLN 98 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 +AA+++EI+R+G+ AV +GQ EAA ALG+ +R ++LPQAMR+I+P L ++++NL K Sbjct: 99 SAAYVSEIIRAGIQAVDKGQREAAEALGIPYRPMMLRIILPQAMRNILPALFNEFINLTK 158 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY----LSLSIMIALFMNRLN 389 S++ +G DL+ +T +E +L IY + L+++ L RL Sbjct: 159 ESAIVSVIGVTDLMRRAQITSAETYLYLEPLLFVGLIYYVLVMGLTVIGRLLERRLK 215 >gi|163735167|ref|ZP_02142603.1| ABC transporter permease protein [Roseobacter litoralis Och 149] gi|161391625|gb|EDQ15958.1| ABC transporter permease protein [Roseobacter litoralis Och 149] Length = 225 Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 41/130 (31%), Positives = 78/130 (60%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 +++ I S ++AF AE+ R+G++++ RGQ EAA A+G+ +A R ++LPQA++ +IP Sbjct: 90 YLAAAITFSIQSSAFFAEVFRAGIVSIERGQWEAARAIGMQRPQAMRRIILPQAIKRMIP 149 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 T + + L+K ++L V +ADL+ + +T + IEI IY ++ ++L + Sbjct: 150 AFTERSIELMKTTTLVATVSYADLLYQANELAQKTFRPIEIFTATALIYFTVIFGLSLCV 209 Query: 386 NRLNAKIALK 395 L ++A+ Sbjct: 210 QALERRLAVS 219 Score = 36.6 bits (83), Expect = 7.5, Method: Compositional matrix adjust. Identities = 15/40 (37%), Positives = 23/40 (57%) Query: 110 IGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 +G ++ RLS K +AW +E FR PPLV +F+ + Sbjct: 37 LGLMLALSRLSPRKWLAWSAGFVIEFFRTTPPLVQLFWFF 76 >gi|239918350|ref|YP_002957908.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Micrococcus luteus NCTC 2665] gi|281415453|ref|ZP_06247195.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Micrococcus luteus NCTC 2665] gi|239839557|gb|ACS31354.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Micrococcus luteus NCTC 2665] Length = 276 Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 48/124 (38%), Positives = 75/124 (60%), Gaps = 4/124 (3%) Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 AL +AA+IAE +R+GL AVPRGQMEAA +LG+ +A +++PQA R ++PPLT++ Sbjct: 147 ALGMVSAAYIAETLRAGLQAVPRGQMEAARSLGMPTWRAMVTIVIPQAFRIVLPPLTNEV 206 Query: 332 LNLLKNSSLAVAVGFA----DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387 + L K+SSL +G A +L G I+ + IL+ YL +++ ++L R Sbjct: 207 ILLTKDSSLVYVLGLAAHEYELTKFGRDGISALDAGMTPILVAGLFYLVITVPLSLLARR 266 Query: 388 LNAK 391 A+ Sbjct: 267 FEAR 270 >gi|254456259|ref|ZP_05069688.1| ABC transporter permease component [Candidatus Pelagibacter sp. HTCC7211] gi|207083261|gb|EDZ60687.1| ABC transporter permease component [Candidatus Pelagibacter sp. HTCC7211] Length = 243 Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 55/176 (31%), Positives = 95/176 (53%), Gaps = 23/176 (13%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 +A+PLL + ++ +GLP + G + SP F+S IAL+ Sbjct: 88 RAVPLLVLILWIYYGLPIMT----------------------GISFSP-FVSGIIALAIS 124 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 +AF AEI R+G+ ++ + Q EA +LGL K RLV+LPQA+++I+P + +Q++ +LK Sbjct: 125 ESAFQAEIFRAGINSIKKAQWEAGSSLGLNFFKRLRLVILPQAIKNILPAIGNQFVYVLK 184 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 SSL +G DL ++ T + +EI + YL L ++++ F+ +L + Sbjct: 185 MSSLVSIIGIGDLTRKANELVVTTYRPLEIYTFLILEYLVLILIVSFFVRKLEKNL 240 >gi|116491603|ref|YP_811147.1| ABC-type amino acid transport system, permease component [Oenococcus oeni PSU-1] gi|290891210|ref|ZP_06554272.1| hypothetical protein AWRIB429_1662 [Oenococcus oeni AWRIB429] gi|116092328|gb|ABJ57482.1| amino acid ABC transporter membrane protein 2, PAAT family [Oenococcus oeni PSU-1] gi|290479174|gb|EFD87836.1| hypothetical protein AWRIB429_1662 [Oenococcus oeni AWRIB429] Length = 222 Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 46/129 (35%), Positives = 82/129 (63%), Gaps = 11/129 (8%) Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291 LP L++I + ++F PV+G + P F + IA++ + + +AEI+R GL+A Sbjct: 70 LPLLLII---FFVYFVLPVIGIY--------LPVFWATVIAMTVFESTMLAEIIRGGLLA 118 Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 +P GQ E A ++G+T+++A ++LPQA++ +IPP+ SQ ++L+K++SLAV + A++ Sbjct: 119 IPIGQTEGARSVGMTNQQALLNIILPQAIKKMIPPIISQLISLVKDTSLAVGIVLAEMTF 178 Query: 352 VGGTIINQT 360 G I Q Sbjct: 179 RGQIIYAQN 187 >gi|319781053|ref|YP_004140529.1| polar amino acid ABC transporter inner membrane subunit [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317166941|gb|ADV10479.1| polar amino acid ABC transporter, inner membrane subunit [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 226 Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 60/202 (29%), Positives = 109/202 (53%), Gaps = 14/202 (6%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 + SFVLG+ + L A L+R F K AL Y+ F G P LV + + + + P Sbjct: 28 LLSFVLGLTVGLGAA-LARLFGPKPLVALVRFYVWIFR--GTPLLVQL---FLIFYGLPS 81 Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 +G + F + I + A+ +EI+R+ + +VP+GQ EAA ++G+T +A Sbjct: 82 VG--------ILLDAFTAALIGFTLNIGAYTSEIIRAAIGSVPKGQWEAAYSIGMTWSQA 133 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370 R +LPQA R +PPL++ +++L+K++SLA A+ ++ I+ T + + + + Sbjct: 134 MRRTILPQAGRVAVPPLSNTFISLVKDTSLAAAITVPEMFQAAQRIVATTYEPLILYVEA 193 Query: 371 MFIYLSLSIMIALFMNRLNAKI 392 +YL+LS +++ RL ++ Sbjct: 194 AILYLALSSVLSALQTRLETRL 215 >gi|313498370|gb|ADR59736.1| Polar amino acid ABC transporter, inner membrane subunit [Pseudomonas putida BIRD-1] Length = 219 Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 55/183 (30%), Positives = 93/183 (50%), Gaps = 24/183 (13%) Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273 + G+ P+L + F FGLPT G T+S F + +AL Sbjct: 59 EVGRGGPVLILLQFFYFGLPTT-----------------------GLTLS-SFTASILAL 94 Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333 + T ++ +EI+R GL AVP+GQ EAA LGL+ A R+++LPQ +R +PPL L Sbjct: 95 AWSTGSYTSEIIRGGLGAVPQGQREAARTLGLSSWDALRIIILPQGLRIALPPLLGFSLV 154 Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393 +L+ +SL + +LV V I + T + + ++L+ +Y ++ + +F+ R ++ Sbjct: 155 ILQTTSLCFTIALPELVGVANDIGSATFEYMSVLLLTGLMYAAVCVPATIFVGRYEKHLS 214 Query: 394 LKE 396 E Sbjct: 215 RYE 217 >gi|291617813|ref|YP_003520555.1| YecS [Pantoea ananatis LMG 20103] gi|291152843|gb|ADD77427.1| YecS [Pantoea ananatis LMG 20103] gi|327394230|dbj|BAK11652.1| inner membrane amino-acid ABC transporter permease protein YecS [Pantoea ananatis AJ13355] Length = 222 Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 65/207 (31%), Positives = 111/207 (53%), Gaps = 18/207 (8%) Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251 F +LG +L+L RLSR + L +Y+S F G P LIA + +++ P Sbjct: 32 FGLILGFLLALM--RLSRFWPVNW---LARIYVSIFR--GTP---LIAQLFMIYYGLP-- 79 Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311 QF G + P S I LS AA+ +E +R + A+ RGQ EAA ++G+T + Sbjct: 80 -QF----GIELDP-IPSAMIGLSLNMAAYASESLRGAIAAIERGQWEAAASIGMTPWQTL 133 Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371 R V+LPQA R+ +PPL + +++L+K++SLA + +L I ++T + + L Sbjct: 134 RRVVLPQAARTALPPLGNSFISLVKDTSLAATIQVPELFRQAQLITSRTLEVFTMYLAAS 193 Query: 372 FIYLSLSIMIALFMNRLNAKIALKEKK 398 IY ++ +++ NRL A + ++++ Sbjct: 194 LIYWVMATVLSALQNRLEAHVNRQDQE 220 Score = 41.6 bits (96), Expect = 0.22, Method: Compositional matrix adjust. Identities = 28/85 (32%), Positives = 42/85 (49%), Gaps = 4/85 (4%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G + T L+ GM I+G L+ RLS V W+ R+YV +FR P + +F + Sbjct: 15 LLKGALFTLQLSIGGMFFGLILGFLLALMRLSRFWPVNWLARIYVSIFRGTPLIAQLFMI 74 Query: 149 YKSV----LSVLPIPDHSIVLPFGM 169 Y + + + PIP I L M Sbjct: 75 YYGLPQFGIELDPIPSAMIGLSLNM 99 >gi|121608947|ref|YP_996754.1| polar amino acid ABC transporter inner membrane subunit [Verminephrobacter eiseniae EF01-2] gi|121553587|gb|ABM57736.1| polar amino acid ABC transporter, inner membrane subunit [Verminephrobacter eiseniae EF01-2] Length = 291 Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 53/170 (31%), Positives = 97/170 (57%), Gaps = 4/170 (2%) Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV---SPEFMSLYIALSCYTAAFIAE 283 +L G P ++ + L + L P LG TV SP F++ + L A+ +E Sbjct: 113 WLFRGTPVILQLLLWFNLALVLPTLGIPGVWEVRTVDVMSP-FLAALLGLGINQGAYTSE 171 Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343 +VR+GL++V GQ EAA ++G+ A R V+LPQAMR IIPP+ ++++ ++K +SLA Sbjct: 172 VVRAGLLSVDAGQYEAAKSIGMPRMLALRRVILPQAMRVIIPPIGNEFVGMIKLTSLASV 231 Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393 + +A+++ I + IE++++ Y+++ ++AL +R+ + A Sbjct: 232 IQYAEILHNAQNIYYANARVIELLIVAGIWYIAVVTVLALLQSRVESHFA 281 Score = 40.8 bits (94), Expect = 0.40, Method: Compositional matrix adjust. Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 2/76 (2%) Query: 86 ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL--V 143 A +I G VNT ++ M ++G + R+S+N ++ W+ R YV +FR P + + Sbjct: 65 AESIRSGLVNTVVMSILAMALGVVLGVVTAVMRVSSNPVLGWVARTYVWLFRGTPVILQL 124 Query: 144 VIFFLYKSVLSVLPIP 159 +++F VL L IP Sbjct: 125 LLWFNLALVLPTLGIP 140 >gi|156934695|ref|YP_001438611.1| glutamine ABC transporter permease protein [Cronobacter sakazakii ATCC BAA-894] gi|156532949|gb|ABU77775.1| hypothetical protein ESA_02530 [Cronobacter sakazakii ATCC BAA-894] Length = 219 Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 62/206 (30%), Positives = 113/206 (54%), Gaps = 12/206 (5%) Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248 I V V G+++ L A +R F + L++I +I G P +V + Y F Sbjct: 25 ISVLGLVGGLIIGLVAG-FARSFGGWIANHIALVFIE--IIRGTPIVVQVMFIY---FAL 78 Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308 P+ FN + + P F + + + + A+IAEI R ++++ +G EA +ALGL+ R Sbjct: 79 PM--AFNDL---RIDP-FTAAVVTIMINSGAYIAEITRGAVLSIHKGFREAGLALGLSKR 132 Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368 + R V+LP A+R ++PPL +Q++ +K++SL + +G A+L G II +A+EI Sbjct: 133 ETIRHVILPLALRRMLPPLGNQWIISIKDTSLFIVIGVAELTRQGQEIIAGNFRALEIWS 192 Query: 369 IWMFIYLSLSIMIALFMNRLNAKIAL 394 IYL ++++++ + RL ++ + Sbjct: 193 AVAVIYLIITLVLSFVLRRLERRMKI 218 >gi|15890700|ref|NP_356372.1| ABC transporter, membrane spanning protein (amino acid) [Agrobacterium tumefaciens str. C58] gi|15158969|gb|AAK89157.1| ABC transporter, membrane spanning protein (amino acid) [Agrobacterium tumefaciens str. C58] Length = 235 Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 45/111 (40%), Positives = 70/111 (63%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + L AA+ +E +RSGL +V GQMEAA ALG ++ A R +++PQ +R+ +PPL + Sbjct: 106 VGLGLCQAAYFSEDLRSGLRSVSPGQMEAAKALGHSYLSAMRFIIMPQGVRNALPPLINH 165 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 ++L KNSSLA+ +G ++L I N + Q EI L+ +YL S++I Sbjct: 166 SVSLFKNSSLALVIGASELTHAVKEIENLSFQTFEIYLVGTVLYLFFSLLI 216 >gi|319405906|emb|CBI79538.1| glutamate/aspartate transport system permease protein GltJ [Bartonella sp. AR 15-3] Length = 250 Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 44/115 (38%), Positives = 73/115 (63%) Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 AL +T+A IAE VRSG+ ++P GQ AA+A+G ++ R ++LP+A+R+I+PPLTS+ Sbjct: 120 ALGFFTSARIAEQVRSGIESIPSGQRYAAMAMGFNTYQSYRYIILPRAIRTIMPPLTSEA 179 Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386 + ++KNSS+A AV +L+ I + E L+ +Y+ +S+ I + M Sbjct: 180 MGIVKNSSIAFAVSINELMQFQYQTIEEVSHVYENYLLVTILYIIISLFIFVLMT 234 Score = 36.6 bits (83), Expect = 6.3, Method: Compositional matrix adjust. Identities = 26/79 (32%), Positives = 38/79 (48%), Gaps = 5/79 (6%) Query: 84 SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSA-----NKLVAWICRVYVEVFRN 138 +Y +L GF NT L+ +I A +G ++G R N + I +VE+ RN Sbjct: 28 TYLDTLLDGFKNTAILSIYSLILAIFVGVIIGMIRTLPKTSIINNFLRAIGTFWVEIMRN 87 Query: 139 IPPLVVIFFLYKSVLSVLP 157 IP LV +F Y V + P Sbjct: 88 IPLLVQVFLWYFVVPKIYP 106 >gi|289577747|ref|YP_003476374.1| polar amino acid ABC transporter inner membrane subunit [Thermoanaerobacter italicus Ab9] gi|297544041|ref|YP_003676343.1| polar amino acid ABC transporter, inner membrane subunit [Thermoanaerobacter mathranii subsp. mathranii str. A3] gi|289527460|gb|ADD01812.1| polar amino acid ABC transporter, inner membrane subunit [Thermoanaerobacter italicus Ab9] gi|296841816|gb|ADH60332.1| polar amino acid ABC transporter, inner membrane subunit [Thermoanaerobacter mathranii subsp. mathranii str. A3] Length = 220 Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 39/86 (45%), Positives = 64/86 (74%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P F++ AL+ +AA++AEI+R+G+ AV GQ EAA +LG+TH A R V++PQA+++I Sbjct: 86 PAFIAGVSALAINSAAYVAEIIRAGIQAVDPGQNEAARSLGMTHTMAMRYVIIPQAIKNI 145 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADL 349 +P L ++++ +LK S++ +GFADL Sbjct: 146 LPALGNEFIVMLKESAIVSVIGFADL 171 >gi|161506742|ref|YP_001576692.1| glutamine ABC transporter substrate binding/permease protein [Lactobacillus helveticus DPC 4571] gi|160347731|gb|ABX26405.1| Glutamine ABC transporter substrate binding/permease protein [Lactobacillus helveticus DPC 4571] Length = 494 Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 65/202 (32%), Positives = 107/202 (52%), Gaps = 22/202 (10%) Query: 189 IFVFSFVLGIVLSLFAT--RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246 I VFS ++GIVL + RLS++ K + + YI I G P +V I Y Sbjct: 301 ITVFSVLIGIVLGMLLALMRLSKN---KLLHWIAVCYIE--FIRGTPQMVQILFVY---- 351 Query: 247 DKPVLGQFNFIGGSTVS--PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304 F G+ +S ++ IA+ + A++AE +RSG+ +V +GQ EAA +LG Sbjct: 352 ---------FGVGALISNLSALVAGIIAIGLNSGAYVAEDIRSGIASVAKGQTEAARSLG 402 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364 L+ KA R V++PQA+++I P L ++++ LLK+SSL +G +L+ I T + + Sbjct: 403 LSQAKAYRYVIIPQALKNIWPALDNEFITLLKDSSLVSVIGVTELMYQTELIQTSTYRGV 462 Query: 365 EIILIWMFIYLSLSIMIALFMN 386 + I M IY ++ + +N Sbjct: 463 LPLFIAMIIYFIMTFTLTRLLN 484 Score = 43.5 bits (101), Expect = 0.064, Method: Compositional matrix adjust. Identities = 30/106 (28%), Positives = 50/106 (47%), Gaps = 3/106 (2%) Query: 44 CVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSG 103 VN + +EK +L + +L E A + + + + YA + G T + Sbjct: 249 AVNKTISRVEKEDL-INKKYLPEAAKYM--KTAQKTNTMAKYAPYFVKGIEYTIIITVFS 305 Query: 104 MIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 ++ ++G L+ RLS NKL+ WI Y+E R P +V I F+Y Sbjct: 306 VLIGIVLGMLLALMRLSKNKLLHWIAVCYIEFIRGTPQMVQILFVY 351 >gi|330719318|ref|ZP_08313918.1| glutamine ABC transporter, substrate binding and permease protein [Leuconostoc fallax KCTC 3537] Length = 482 Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 50/159 (31%), Positives = 80/159 (50%), Gaps = 23/159 (14%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 + LPL+ ++ F+ GLPT++ T P F++ I L Sbjct: 328 RGLPLMVLAFFIYIGLPTVI-----------------------GTKVPAFLAGIITLVLN 364 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 A+ A VR G AV +GQMEAA +LGL + KA R V++PQ +R ++P +Q++ LK Sbjct: 365 EGAYTAAFVRGGFEAVEKGQMEAARSLGLPYGKAMRKVIVPQGLRIMVPSFINQFIITLK 424 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375 ++S+ A+G +L G I+ + Q + I +YL Sbjct: 425 DTSILSAIGLLELTQTGTLIVARNSQGFRVWAIIAVMYL 463 >gi|229134354|ref|ZP_04263167.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus BDRD-ST196] gi|228648975|gb|EEL04997.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus BDRD-ST196] Length = 222 Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 67/228 (29%), Positives = 114/228 (50%), Gaps = 33/228 (14%) Query: 177 SFPTL------TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230 SFP L T+ + SF +GI L++ ++ + + +YIS F Sbjct: 11 SFPQLFKYVYITLGITVVSMIISFFIGIGLAIITKNKTKFLYP-----IARVYISFFR-- 63 Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL------YIALSCYTAAFIAEI 284 G P LV + + L+F P +SP F L I LS AA+++EI Sbjct: 64 GTPLLVQL---FVLYFGLP-----------QISPAFTVLTAMQATLIGLSLNNAAYLSEI 109 Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344 +R L AV GQM+A +++G+T +A R ++ PQA+R +P + ++ LLK SSL+ A+ Sbjct: 110 IRGSLNAVESGQMDACLSVGMTKAQAMRQIIFPQAIRVAVPSFGNNFVGLLKESSLSFAL 169 Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 G A++++ + Q+ + +E L +Y ++I+I+ RL K+ Sbjct: 170 GVAEILAQAKMLAAQSYRYMESYLAVAIVYWIITIVISWGQKRLEKKL 217 >gi|251796881|ref|YP_003011612.1| polar amino acid ABC transporter inner membrane protein [Paenibacillus sp. JDR-2] gi|247544507|gb|ACT01526.1| polar amino acid ABC transporter, inner membrane subunit [Paenibacillus sp. JDR-2] Length = 216 Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 44/125 (35%), Positives = 79/125 (63%), Gaps = 1/125 (0%) Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327 S + L+ + AA I+EIVRSGL ++P GQ+EAA + GLT+ + ++LPQ +R ++PP+ Sbjct: 90 SAIVGLAVFEAAMISEIVRSGLSSIPIGQVEAARSSGLTYTQTVWHIVLPQGLRRMVPPI 149 Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT-GQAIEIILIWMFIYLSLSIMIALFMN 386 SQ+++LLK++SLA+ + +L+ +I Q + I+ + +Y +++ ++L Sbjct: 150 VSQFISLLKDTSLAIVISLPELMHNSKIVIAQNFDYTLPILALVAVLYFTVNYALSLAAK 209 Query: 387 RLNAK 391 RL K Sbjct: 210 RLENK 214 Score = 40.8 bits (94), Expect = 0.34, Method: Compositional matrix adjust. Identities = 22/61 (36%), Positives = 37/61 (60%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 I+ GF T W+AF ++ + ++G++ G R +V+ I V VE RN+P L+++FF Sbjct: 15 IMKGFGITLWVAFIAIVLSFVLGSITGTLRYMRIPVVSRILGVIVEFIRNLPLLLILFFT 74 Query: 149 Y 149 Y Sbjct: 75 Y 75 >gi|255263034|ref|ZP_05342376.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Thalassiobium sp. R2A62] gi|255105369|gb|EET48043.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Thalassiobium sp. R2A62] Length = 293 Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 46/143 (32%), Positives = 80/143 (55%), Gaps = 1/143 (0%) Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306 D + +F F G P +S I L+ + AAF+ EIVR+G+ +VP+GQ EAA A+G++ Sbjct: 146 DNAHIWEF-FFGEMRRFPSLISGVIVLAMFEAAFVGEIVRAGIQSVPKGQREAARAIGMS 204 Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 + R +++PQAMR ++PP+ +Q+++L+K+SS+ + +L ++ T E Sbjct: 205 SFQEMRYIIMPQAMRKVVPPMANQFISLIKDSSIISLISVQELTYKTVELVASTRLIFEA 264 Query: 367 ILIWMFIYLSLSIMIALFMNRLN 389 L Y L +++ RL Sbjct: 265 WLTTAAFYFILCFGLSMLFRRLE 287 >gi|330821184|ref|YP_004350046.1| hypothetical protein bgla_2g20990 [Burkholderia gladioli BSR3] gi|327373179|gb|AEA64534.1| hypothetical protein bgla_2g20990 [Burkholderia gladioli BSR3] Length = 238 Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 48/128 (37%), Positives = 76/128 (59%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +A+S +AA+ AEI+R+G+ AVPRGQ+EAA ALG+ R V+LPQA R ++PP Sbjct: 93 VAMSMSSAAYNAEIIRAGIQAVPRGQVEAAQALGMGWPGIHRHVVLPQAARIVLPPYVGN 152 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 +++ KN+SLA + +L+ TI + T +A+E + I IYL ++ ++ RL Sbjct: 153 FISHTKNTSLASVITVPELMLQAQTIYSSTYRAVETLTIAGAIYLGITTVLTFAQLRLER 212 Query: 391 KIALKEKK 398 A + Sbjct: 213 SGAAGRRD 220 >gi|261884808|ref|ZP_06008847.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Campylobacter fetus subsp. venerealis str. Azul-94] Length = 221 Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 43/104 (41%), Positives = 72/104 (69%), Gaps = 3/104 (2%) Query: 249 PVLGQ---FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305 PVL Q F F+ +T+S F + IAL ++A++AEIVRSG+ +V +GQMEAA A+GL Sbjct: 90 PVLLQLMIFAFVILATLSDNFYAAVIALGLNSSAYVAEIVRSGINSVDKGQMEAARAMGL 149 Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349 ++ + R ++ PQA+++I+P L +++++L K +S+ +G DL Sbjct: 150 SYSVSMRQIIFPQAVKNILPALANEFISLFKETSVVGLIGIFDL 193 >gi|152974370|ref|YP_001373887.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152023122|gb|ABS20892.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus cytotoxicus NVH 391-98] Length = 214 Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 42/94 (44%), Positives = 68/94 (72%), Gaps = 3/94 (3%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +AL+ + AA I+EIVRSGL+++ +GQ+EA A GL++ + ++LPQA+R ++PPL SQ Sbjct: 93 VALTIFEAAMISEIVRSGLLSIEKGQIEAGRASGLSYIQTLWYIILPQALRRMVPPLVSQ 152 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364 +++LLK++SLAV + +L+ IIN GQ + Sbjct: 153 FISLLKDTSLAVVISLPELMH-NAQIIN--GQNV 183 Score = 39.7 bits (91), Expect = 0.85, Method: Compositional matrix adjust. Identities = 24/71 (33%), Positives = 41/71 (57%), Gaps = 2/71 (2%) Query: 79 YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138 YT D + +L G + T +A + + +IG++VG R + +++ I V VE+ RN Sbjct: 7 YTGD--HIVFLLKGLLVTLEIAIISIFLSFLIGSIVGTVRYTKIPILSQIFAVIVEIIRN 64 Query: 139 IPPLVVIFFLY 149 +P L++IFF Y Sbjct: 65 LPLLLIIFFTY 75 >gi|330430557|gb|AEC21891.1| polar amino acid ABC transporter inner membrane subunit [Pusillimonas sp. T7-7] Length = 237 Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 43/123 (34%), Positives = 73/123 (59%) Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 AL YT + I E +R+G+ A+PRGQ A +A+G + + R ++LPQ R I+PPLTS++ Sbjct: 109 ALGIYTGSRICEQLRAGIQALPRGQRNAGLAMGFSLFQTYRHIILPQVFRHILPPLTSEF 168 Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 L + KNS++A +G +L +++ T Q E +I Y+ ++ +I FM + + Sbjct: 169 LIISKNSAVASTIGLLELSGQARQLVDYTAQPYESFIIVTLAYVFMNFLILRFMGWIRKR 228 Query: 392 IAL 394 +L Sbjct: 229 SSL 231 Score = 43.1 bits (100), Expect = 0.081, Method: Compositional matrix adjust. Identities = 28/79 (35%), Positives = 36/79 (45%) Query: 81 SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140 S+Y I GFV TF L + A +GT G R + + YV +FRNIP Sbjct: 10 EPSTYLGWITNGFVTTFALTVCAWVLALAVGTFFGILRTLPSTAARAVGTTYVSIFRNIP 69 Query: 141 PLVVIFFLYKSVLSVLPIP 159 +V F Y V +LP P Sbjct: 70 LIVQFFIWYFVVPEILPTP 88 >gi|302541694|ref|ZP_07294036.1| glutamate permease [Streptomyces hygroscopicus ATCC 53653] gi|302459312|gb|EFL22405.1| glutamate permease [Streptomyces himastatinicus ATCC 53653] Length = 214 Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 47/113 (41%), Positives = 73/113 (64%), Gaps = 9/113 (7%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +AL CYT+AFI E VRSG+ VP GQ EAA +LG+T + V+LPQA R++IPP+ S Sbjct: 89 LALGCYTSAFICEAVRSGINTVPVGQGEAARSLGMTFEQTLGAVVLPQAFRAVIPPVGST 148 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTI--INQTGQAIEIILIWMFIYLSLSIMI 381 + L KNS++A + +L+ GT +N+ G +I IW F+++++ ++ Sbjct: 149 LIALAKNSAIAGSFSVTELL---GTYKPLNEMGYSI----IWSFVWIAVGYLL 194 >gi|284032615|ref|YP_003382546.1| polar amino acid ABC transporter inner membrane subunit [Kribbella flavida DSM 17836] gi|283811908|gb|ADB33747.1| polar amino acid ABC transporter, inner membrane subunit [Kribbella flavida DSM 17836] Length = 215 Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 49/129 (37%), Positives = 82/129 (63%), Gaps = 7/129 (5%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + AL+ YT+AF+ E+VRSG+ +P GQ EAA A+G+T + +V+LPQA R+I+P Sbjct: 86 FWAAVTALTVYTSAFVCEVVRSGINTIPPGQAEAARAVGMTFVQVLTIVVLPQAYRAIVP 145 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTI---INQTGQAIEIILIWMFIYLSLSIMIA 382 P+TS + LLKN++ +A GF+ L + G I + + G++ + L+W+ I + I+ Sbjct: 146 PMTSIMIALLKNTT--IAAGFSVLEA--GAIPAAMAERGESQMLTLLWITIGFLILIIPL 201 Query: 383 LFMNRLNAK 391 +F+ R + Sbjct: 202 VFLQRWAER 210 >gi|330429007|gb|AEC20341.1| glutamate/aspartate transport system permease protein [Pusillimonas sp. T7-7] Length = 196 Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 71/207 (34%), Positives = 106/207 (51%), Gaps = 28/207 (13%) Query: 196 LGIVLSL---FATR---LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249 LG+VL+L F R L+ F+ +A+PL+ ++ F F L VL A+ P Sbjct: 7 LGVVLALARLFGPRWVSLAAAFYVNLFRAIPLI-LTIFWFFFLVPFVLRAVT-----GNP 60 Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYT---AAFIAEIVRSGLIAVPRGQMEAAIALGLT 306 G V P +Y ALS + AA+ EIVR+G+ +V +GQM+AAIALGLT Sbjct: 61 YAG---------VGP----IYAALSAFVLAEAAYYCEIVRAGINSVRKGQMQAAIALGLT 107 Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 +A R V+LPQA ++ P L +Q + LLK++SL + D + + ++ G +E+ Sbjct: 108 RWQALRHVVLPQAFHNMTPSLINQTIALLKDTSLVYVISLNDFLGAATKVAHRDGTLVEM 167 Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIA 393 L YL+L +N L K A Sbjct: 168 YLFVAVTYLALCSFGVWLVNILKKKQA 194 >gi|317404418|gb|EFV84835.1| amino acid ABC transporter permease [Achromobacter xylosoxidans C54] Length = 367 Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 62/178 (34%), Positives = 97/178 (54%), Gaps = 16/178 (8%) Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231 N R P LT+ + F+F +G++L+L R KAL ++YI LI G Sbjct: 154 NARWGGLP-LTLILSTFGIAFAFPIGVLLAL-----GRRSKMPAIKALCVVYIE--LIRG 205 Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291 +P + L+ F V+ G ++ + + IA+ + AA+IAE VR GL A Sbjct: 206 VPLISLL-------FMSSVMLPLFLPEGFSID-KLLRAQIAIIMFAAAYIAETVRGGLQA 257 Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349 +P+GQ E A +LGL + + R ++LPQA++ +IPPL S ++ L K++SL V +G DL Sbjct: 258 IPKGQYEGADSLGLNYWQQMRKIILPQALKIVIPPLVSIFIALFKDTSLVVIIGIFDL 315 >gi|254477959|ref|ZP_05091344.1| ABC-type glutamine transport system, permease component [Ruegeria sp. R11] gi|214028544|gb|EEB69380.1| ABC-type glutamine transport system, permease component [Ruegeria sp. R11] Length = 254 Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 58/214 (27%), Positives = 109/214 (50%), Gaps = 24/214 (11%) Query: 191 VFSFVLGIVLSL------FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244 V S VLG++++L R+ + + +A+PLL + ++ +GLP + Sbjct: 59 VISIVLGLLVALPGLSEKRGWRIVNRVYVELIRAIPLLPMLFWVFYGLPII--------- 109 Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304 F +G + F I L+ +AF AEI R+G+ ++ +GQ EAA +G Sbjct: 110 ---------FRSMGLNVPIDPFWGAIITLALSDSAFTAEIYRAGIQSIAKGQREAAQTVG 160 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364 L++ + R V+LPQA+R I+PPL +Q++ ++K S+ A +G +L ++ + + Sbjct: 161 LSYAQTMRYVILPQAIRRILPPLANQFIYIVKMSAFASVIGMQELTRRANELVVTEYRPL 220 Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 EI + + YL L ++I+ + L ++ E+ Sbjct: 221 EIYTLLILEYLILVLLISAGVRWLERRMGSDERS 254 >gi|171059367|ref|YP_001791716.1| polar amino acid ABC transporter inner membrane subunit [Leptothrix cholodnii SP-6] gi|171060692|ref|YP_001793041.1| polar amino acid ABC transporter inner membrane subunit [Leptothrix cholodnii SP-6] gi|170776812|gb|ACB34951.1| polar amino acid ABC transporter, inner membrane subunit [Leptothrix cholodnii SP-6] gi|170778137|gb|ACB36276.1| polar amino acid ABC transporter, inner membrane subunit [Leptothrix cholodnii SP-6] Length = 221 Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 45/131 (34%), Positives = 82/131 (62%), Gaps = 6/131 (4%) Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326 +S + + + AA+ +EI+R+G+ +VPRGQ+ A A+G+T+R+ +LV+LPQA R+++P Sbjct: 92 LSAIVTFTLFEAAYYSEIMRAGIQSVPRGQVHAGYAVGMTYRQTMQLVVLPQAFRNMLPV 151 Query: 327 LTSQYLNLLKNSSLAVAVGFADLV---SVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 L +Q + L +++SL A+G DL+ V G N + +E L+ +Y + +++ Sbjct: 152 LLTQTIILFQDTSLVYAIGAYDLLKGFEVAGKNFN---RPVETYLVAAVVYFVICFGLSM 208 Query: 384 FMNRLNAKIAL 394 + RL KIA+ Sbjct: 209 LVRRLQKKIAI 219 >gi|260102147|ref|ZP_05752384.1| glutamine ABC superfamily ATP binding cassette transporter, permease protein [Lactobacillus helveticus DSM 20075] gi|260084037|gb|EEW68157.1| glutamine ABC superfamily ATP binding cassette transporter, permease protein [Lactobacillus helveticus DSM 20075] Length = 494 Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 65/202 (32%), Positives = 107/202 (52%), Gaps = 22/202 (10%) Query: 189 IFVFSFVLGIVLSLFAT--RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246 I VFS ++GIVL + RLS++ K + + YI I G P +V I Y Sbjct: 301 ITVFSVLIGIVLGMLLALMRLSKN---KLLHWIAVCYIE--FIRGTPQMVQILFVY---- 351 Query: 247 DKPVLGQFNFIGGSTVS--PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304 F G+ +S ++ IA+ + A++AE +RSG+ +V +GQ EAA +LG Sbjct: 352 ---------FGVGALISNLSALVAGIIAIGLNSGAYVAEDIRSGIASVAKGQTEAARSLG 402 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364 L+ KA R V++PQA+++I P L ++++ LLK+SSL +G +L+ I T + + Sbjct: 403 LSQAKAYRYVIIPQALKNIWPALDNEFITLLKDSSLVSVIGVTELMYQTELIQTSTYRGV 462 Query: 365 EIILIWMFIYLSLSIMIALFMN 386 + I M IY ++ + +N Sbjct: 463 LPLFIAMIIYFIMTFTLTRLLN 484 Score = 43.5 bits (101), Expect = 0.061, Method: Compositional matrix adjust. Identities = 30/106 (28%), Positives = 50/106 (47%), Gaps = 3/106 (2%) Query: 44 CVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSG 103 VN + +EK +L + +L E A + + + + YA + G T + Sbjct: 249 AVNKTISRVEKEDL-INKKYLPEAAKYM--KTAQKTNTMAKYAPYFVKGIEYTIIITVFS 305 Query: 104 MIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 ++ ++G L+ RLS NKL+ WI Y+E R P +V I F+Y Sbjct: 306 VLIGIVLGMLLALMRLSKNKLLHWIAVCYIEFIRGTPQMVQILFVY 351 >gi|289704647|ref|ZP_06501075.1| ABC transporter, permease protein [Micrococcus luteus SK58] gi|289558601|gb|EFD51864.1| ABC transporter, permease protein [Micrococcus luteus SK58] Length = 276 Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 48/124 (38%), Positives = 75/124 (60%), Gaps = 4/124 (3%) Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 AL +AA+IAE +R+GL AVPRGQMEAA +LG+ +A +++PQA R ++PPLT++ Sbjct: 147 ALGMVSAAYIAETLRAGLQAVPRGQMEAARSLGMPTWRAMVTIVIPQAFRIVLPPLTNEV 206 Query: 332 LNLLKNSSLAVAVGFA----DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387 + L K+SSL +G A +L G I+ + IL+ YL +++ ++L R Sbjct: 207 ILLTKDSSLVYVLGLAAHEYELTKFGRDGISALDAGMTPILVAGLFYLVITVPLSLLARR 266 Query: 388 LNAK 391 A+ Sbjct: 267 FEAR 270 >gi|17549155|ref|NP_522495.1| amino acid ABC transporter transmembrane protein [Ralstonia solanacearum GMI1000] gi|17431406|emb|CAD18085.1| probable amino acid transmembrane abc transporter protein [Ralstonia solanacearum GMI1000] Length = 233 Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 58/151 (38%), Positives = 83/151 (54%), Gaps = 14/151 (9%) Query: 245 HFDKPVLGQ--FNFIGGSTVSP------------EFMSLYIALSCYTAAFIAEIVRSGLI 290 H + P L Q F + G ST+ P E + +AL AA+ +E +RSGL Sbjct: 66 HCNVPTLVQLMFWYFGISTLLPLPALDWLGEHHSEVVFAIVALGLCQAAYFSEDLRSGLR 125 Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 A+P GQ EAA ALG T R VLLPQA+R+ +P L + ++L KNSSLA+A+G ++ Sbjct: 126 AIPPGQEEAARALGNTFIGTLRYVLLPQAVRNALPALINHSVSLFKNSSLAMAIGVTEMT 185 Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 I N + +A E L+ +YL S++I Sbjct: 186 HAVKEIENASFRAFESYLLATLMYLGFSLVI 216 >gi|157371175|ref|YP_001479164.1| polar amino acid ABC transporter inner membrane subunit [Serratia proteamaculans 568] gi|157322939|gb|ABV42036.1| polar amino acid ABC transporter, inner membrane subunit [Serratia proteamaculans 568] Length = 220 Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 51/180 (28%), Positives = 98/180 (54%), Gaps = 10/180 (5%) Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG-QFNFIGGSTVSPEFMSLYIALSCYTA 278 PL ++S F + LIA + +++ P G +F+ F + I LS TA Sbjct: 50 PLSWLSRFYVSLFRGTPLIAQLFMIYYGLPQFGIEFD---------PFPAALIGLSLNTA 100 Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338 A+ +E +R+ + ++ +GQ EAA ++G+T + R V+LPQA R+ +PPL + ++ L+K++ Sbjct: 101 AYTSETLRAAISSIEKGQWEAAASIGMTRWQTLRRVILPQAARTALPPLGNSFIGLVKDT 160 Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 SLA + +L I ++T + + L IY ++ +++ NRL A + ++++ Sbjct: 161 SLAATIQVPELFRQAQLITSRTLEVFTMYLAASLIYWVMATLLSALQNRLEAHVNRQDQE 220 Score = 37.4 bits (85), Expect = 4.4, Method: Compositional matrix adjust. Identities = 20/61 (32%), Positives = 33/61 (54%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G + T L+ GM ++G L+ RLS ++W+ R YV +FR P + +F + Sbjct: 15 LLKGAILTLQLSLGGMALGLMLGFLLALMRLSPLWPLSWLSRFYVSLFRGTPLIAQLFMI 74 Query: 149 Y 149 Y Sbjct: 75 Y 75 >gi|224824055|ref|ZP_03697163.1| polar amino acid ABC transporter, inner membrane subunit [Lutiella nitroferrum 2002] gi|224603474|gb|EEG09649.1| polar amino acid ABC transporter, inner membrane subunit [Lutiella nitroferrum 2002] Length = 221 Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 59/188 (31%), Positives = 103/188 (54%), Gaps = 6/188 (3%) Query: 207 LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF 266 L R H + + LY++ F +P L++I+ Y + P++ Q+ S V P F Sbjct: 40 LGRLSHHRLLASAAKLYVNYFR--SIPLLLVISWFYLV---VPLVLQWLTGNPSPVGP-F 93 Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326 S +A + AA+ AEIVR+G+ ++P+GQ AA A+G+++ + RLV+LPQA R + P Sbjct: 94 TSCLVAFVMFEAAYFAEIVRAGIQSIPKGQAGAAYAIGMSYGQVMRLVILPQAFRKMTPL 153 Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386 L Q + L +++SL AVG D ++ + + GQ + +L+ +Y S + + Sbjct: 154 LLQQSIILFQDTSLVYAVGLMDFLNTARSKGDIIGQPDQFLLLAGAVYFVSSFAASALVK 213 Query: 387 RLNAKIAL 394 RL ++A+ Sbjct: 214 RLQQRLAI 221 Score = 40.0 bits (92), Expect = 0.58, Method: Compositional matrix adjust. Identities = 19/40 (47%), Positives = 29/40 (72%) Query: 110 IGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 +GTL+ GRLS ++L+A ++YV FR+IP L+VI + Y Sbjct: 34 LGTLIALGRLSHHRLLASAAKLYVNYFRSIPLLLVISWFY 73 >gi|114771230|ref|ZP_01448650.1| ABC-type glutamine transport system, permease component [alpha proteobacterium HTCC2255] gi|114548155|gb|EAU51042.1| ABC-type glutamine transport system, permease component [alpha proteobacterium HTCC2255] Length = 252 Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 53/182 (29%), Positives = 96/182 (52%), Gaps = 18/182 (9%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 +++PLL + ++ +GLP + F +G + F I L+ Sbjct: 89 RSIPLLPMLFWVFYGLPII------------------FKSMGLNIPIDPFWGAVITLAIS 130 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 +AF AEI RSG+ ++ +GQ EAA ++GLT+ + R V+LPQA+R I+PPL +Q++ ++K Sbjct: 131 DSAFTAEIYRSGIQSIAKGQKEAAHSIGLTYAQTMRYVILPQAIRRILPPLANQFIYIVK 190 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 S+ A +G +L I+ + +EI + + YL L ++I+ + L ++ E Sbjct: 191 MSAFASVIGMQELTRRANEIVVTEYRPLEIYSLLILEYLVLVLIISAGVRWLERRMGSNE 250 Query: 397 KK 398 + Sbjct: 251 NQ 252 >gi|330429590|gb|AEC20924.1| putative amino acid ABC transporter permease protein [Pusillimonas sp. T7-7] Length = 365 Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 61/179 (34%), Positives = 98/179 (54%), Gaps = 18/179 (10%) Query: 172 NNRGLSFP-TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230 N+R P TL + T F F G++L+L R H KAL ++YI LI Sbjct: 152 NSRWGGLPLTLILATFGIAVAFPF--GLLLAL-----GRRSHMPAVKALCVVYIE--LIR 202 Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290 G+P + L+ F V+ G ++ + + IA+ + AA++AE VR GL Sbjct: 203 GVPLISLL-------FMSSVMLPLFLPEGFSID-KLLRAQIAIILFAAAYVAETVRGGLQ 254 Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349 A+P+GQ E A ++GL++ + R ++LPQA++ +IPPL +++L K++SL V +G DL Sbjct: 255 AIPKGQYEGADSIGLSYWQQMRKIILPQALKVVIPPLVGIFISLFKDTSLVVIIGIFDL 313 >gi|328956327|ref|YP_004373660.1| amino acid ABC transporter membrane protein 1, PAAT family [Coriobacterium glomerans PW2] gi|328456651|gb|AEB07845.1| amino acid ABC transporter membrane protein 1, PAAT family [Coriobacterium glomerans PW2] Length = 249 Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 58/212 (27%), Positives = 111/212 (52%), Gaps = 18/212 (8%) Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALK 241 T+ + S +LG +L +F+T SR +A+ +Y+ + LP + Sbjct: 28 TLAVSVAGLALSMILGTLLGVFSTTRSRAL-----RAISRIYVEFYQNTPLPVQIFF--- 79 Query: 242 YQLHFDKPVLGQFNFIGGST---VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQME 298 ++ P + Q +G +T ++P F + + Y AA++AE++R+G+ +VPRGQ+E Sbjct: 80 --MYMAGPQILQ-AILGAATPVRIAP-FAIGSLGVGLYHAAYVAEVIRTGIESVPRGQLE 135 Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN 358 +A + G + +A R ++LPQ + I+PPL +Q LNL+KN+S+ + DL+ ++ Sbjct: 136 SARSQGFSRAQAYRYIVLPQTFKMILPPLCNQALNLIKNTSVLALIAGGDLMYQADNFVS 195 Query: 359 QTG---QAIEIILIWMFIYLSLSIMIALFMNR 387 +G I ++ I L+I++ + +R Sbjct: 196 SSGFLQGYIMACALYFLICFPLAILVQVLESR 227 Score = 40.8 bits (94), Expect = 0.34, Method: Compositional matrix adjust. Identities = 21/58 (36%), Positives = 36/58 (62%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 GF T ++ +G+ + I+GTL+G + ++ + I R+YVE ++N P V IFF+Y Sbjct: 24 GFFFTLAVSVAGLALSMILGTLLGVFSTTRSRALRAISRIYVEFYQNTPLPVQIFFMY 81 >gi|169349946|ref|ZP_02866884.1| hypothetical protein CLOSPI_00686 [Clostridium spiroforme DSM 1552] gi|169293159|gb|EDS75292.1| hypothetical protein CLOSPI_00686 [Clostridium spiroforme DSM 1552] Length = 227 Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 41/126 (32%), Positives = 76/126 (60%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +A+S + A+ E++RSG+ V +GQ EA LGL+ + R V+LPQA + I+PPL S+ Sbjct: 102 VAMSINSGAYTTELIRSGINGVDKGQWEACQTLGLSRWQTMRFVILPQAFKRIVPPLVSE 161 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++ L+K+SSL +G +L++ I NQ + + + YL++++ I+ ++ Sbjct: 162 FITLIKDSSLISVIGAVELMNSAKVIGNQYYEFMSPYCLAGLYYLAMTLTISYIAKKIER 221 Query: 391 KIALKE 396 K+A+ + Sbjct: 222 KLAVSD 227 >gi|153952035|ref|YP_001398237.1| His/Glu/Gln/Arg/opine ABC transporter permease [Campylobacter jejuni subsp. doylei 269.97] gi|152939481|gb|ABS44222.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Campylobacter jejuni subsp. doylei 269.97] Length = 261 Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 60/175 (34%), Positives = 97/175 (55%), Gaps = 16/175 (9%) Query: 221 LLYISTF---LIFGLPTLVLIALKYQLHFDKPVLGQFN-FIGGSTVSPEFMSLYIALSCY 276 L ++STF LI G P LV + L Y + + LG N ++ G I LSC+ Sbjct: 96 LRFLSTFYIELIRGTPLLVQVLLIYYIIANN--LGLDNRYVAG----------VIILSCF 143 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 +AA++AEI R+G++++ Q+E+A ALGL + V+ PQA+++I+ PL+ Q+ NL+K Sbjct: 144 SAAYLAEIFRAGILSISISQLESARALGLKEMQIFAYVIFPQALKNILAPLSGQFANLIK 203 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 +SSL + +L I + T +E +I YL L++ I++F L K Sbjct: 204 DSSLLSVIAVNELTQSAQEINSYTFATLEAYVILAITYLVLTLPISIFSRYLERK 258 >gi|271963749|ref|YP_003337945.1| amino acid ABC transporter permease [Streptosporangium roseum DSM 43021] gi|270506924|gb|ACZ85202.1| ABC-type amino acid transport system permease component-like protein [Streptosporangium roseum DSM 43021] Length = 312 Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 40/99 (40%), Positives = 69/99 (69%), Gaps = 1/99 (1%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G TV+P FM++ L Y + +AEIVR+G++++PRGQ EAA+A+GL + R++LLPQ Sbjct: 150 GLTVTP-FMAVVTGLVLYNGSVLAEIVRAGILSIPRGQSEAALAIGLRKGQVMRMILLPQ 208 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII 357 + +++P + +Q + LLK+++L V F DL++ G ++ Sbjct: 209 GVTAMMPAIVAQLVVLLKDTALGFIVSFEDLLNAGARVL 247 >gi|119383822|ref|YP_914878.1| polar amino acid ABC transporter, inner membrane subunit [Paracoccus denitrificans PD1222] gi|119373589|gb|ABL69182.1| L-glutamate ABC transporter membrane protein / L-aspartate ABC transporter membrane protein [Paracoccus denitrificans PD1222] Length = 253 Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 51/134 (38%), Positives = 81/134 (60%), Gaps = 6/134 (4%) Query: 260 STVSPEFMSLYIALSC---YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316 + P + + + AL+C YTAA IAE VR+G+ A+P GQ EAA ALGL+ A R +++ Sbjct: 95 KQMPPPWGAFFPALACLGLYTAARIAEQVRAGIEALPAGQDEAAAALGLSPWAARRHIIV 154 Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376 PQA+R I+P LTS+ + + KN+S+A+ +G +L + I T Q IYL Sbjct: 155 PQALRLIVPSLTSEVMGIYKNTSVALTIGLLELTAQARQISEATFQTFGAFAAATIIYLL 214 Query: 377 LSIM---IALFMNR 387 L+++ + L+++R Sbjct: 215 LALVAYRLMLWIDR 228 Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 36/80 (45%), Positives = 43/80 (53%) Query: 78 PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137 P Y +L G + T LA G A IG LVG GR S N+ VA R+YVEVFR Sbjct: 8 PAIDGQLYIQWLLSGLMWTLLLAVGGWWIAFAIGVLVGVGRTSRNRAVALAARLYVEVFR 67 Query: 138 NIPPLVVIFFLYKSVLSVLP 157 NIP LV +F Y + +LP Sbjct: 68 NIPVLVQMFLWYFVLPELLP 87 >gi|212712948|ref|ZP_03321076.1| hypothetical protein PROVALCAL_04046 [Providencia alcalifaciens DSM 30120] gi|212684426|gb|EEB43954.1| hypothetical protein PROVALCAL_04046 [Providencia alcalifaciens DSM 30120] Length = 226 Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 51/176 (28%), Positives = 97/176 (55%), Gaps = 8/176 (4%) Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE----FMSLYIALSC 275 PL +++ F + ++ L+ + + + P + Q N +G +SP+ +S +A Sbjct: 52 PLRWLAAFYVNTFRSVPLVMVLFWFYLVVPNILQ-NVLG---LSPKNDIRLISAVVAFCL 107 Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335 + AA+ +EI+R+G+ ++ +GQ A++ALG+T + RLV+LPQA R+++P L +Q + L Sbjct: 108 FEAAYYSEIIRAGIQSISKGQASASLALGMTQMQTMRLVVLPQAFRAMVPLLLTQGIVLF 167 Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 +++SL +G D I + G +E+IL IY S ++ +N L + Sbjct: 168 QDTSLVYVLGLTDFFRTATNIGERDGTQVEMILFAGLIYFIFSFGASMLVNYLKKR 223 Score = 38.5 bits (88), Expect = 1.9, Method: Compositional matrix adjust. Identities = 20/65 (30%), Positives = 39/65 (60%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151 GF+ T + + ++ + GT++ RLS+ K + W+ YV FR++P ++V+F+ Y Sbjct: 20 GFIITAKITAAAIVVGILWGTVLAVMRLSSIKPLRWLAAFYVNTFRSVPLVMVLFWFYLV 79 Query: 152 VLSVL 156 V ++L Sbjct: 80 VPNIL 84 >gi|317487125|ref|ZP_07945928.1| His/Glu/Gln/Arg/opine family amino ABC transporter [Bilophila wadsworthia 3_1_6] gi|316921609|gb|EFV42892.1| His/Glu/Gln/Arg/opine family amino ABC transporter [Bilophila wadsworthia 3_1_6] Length = 339 Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 56/158 (35%), Positives = 88/158 (55%), Gaps = 18/158 (11%) Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252 +F LG+ L+L R F K +Y+ F LPT+VL++L +H+ P +G Sbjct: 152 AFWLGVFLTLV-----RFFENKVMTGFVKVYVDVFR--ALPTIVLVSL---IHYGAPFIG 201 Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312 + P +S + L+ +AF +EI+RSG+ AV GQ+EAA +LGL K R Sbjct: 202 IY--------LPLMVSGILTLTLNHSAFFSEILRSGVSAVGHGQLEAARSLGLGTFKTFR 253 Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 L++ PQA ++ +PPLT Q++ LLK + + VG +L+ Sbjct: 254 LIVFPQAFKTAMPPLTGQFVALLKETVICSVVGIPELL 291 >gi|262274331|ref|ZP_06052142.1| amino acid ABC transporter permease protein [Grimontia hollisae CIP 101886] gi|262220894|gb|EEY72208.1| amino acid ABC transporter permease protein [Grimontia hollisae CIP 101886] Length = 366 Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 45/127 (35%), Positives = 77/127 (60%), Gaps = 8/127 (6%) Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315 F+ G + S + + I + + +A++AE+VR GL A+P+GQ EAA ALGLT+ K L++ Sbjct: 221 FMSGESESNKLVRALIGVVMFASAYMAEVVRGGLQAIPKGQYEAADALGLTYWKKMNLII 280 Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG---GTIINQTGQAIE-----II 367 LPQA++ IP + + ++ L K++SL + +G D++ +G T N G A E + Sbjct: 281 LPQALKISIPSIVNTFIGLFKDTSLVLIIGMFDVLGIGQAANTDPNWLGFATESYVFVAL 340 Query: 368 LIWMFIY 374 + W+F + Sbjct: 341 VFWIFCF 347 >gi|299069325|emb|CBJ40591.1| amino acid ABC transporter transmembrane protein [Ralstonia solanacearum CMR15] Length = 233 Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 58/151 (38%), Positives = 83/151 (54%), Gaps = 14/151 (9%) Query: 245 HFDKPVLGQ--FNFIGGSTVSP------------EFMSLYIALSCYTAAFIAEIVRSGLI 290 H + P L Q F + G ST+ P E + +AL AA+ +E +RSGL Sbjct: 66 HCNVPTLVQLMFWYFGISTLLPLPALDWLGEHHSEVVFAIVALGLCQAAYFSEDLRSGLR 125 Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 A+P GQ EAA ALG T R VLLPQA+R+ +P L + ++L KNSSLA+A+G ++ Sbjct: 126 AIPPGQEEAARALGNTFIGTLRYVLLPQAVRNALPALINHSVSLFKNSSLAMAIGVTEMT 185 Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 I N + +A E L+ +YL S++I Sbjct: 186 HAVKEIENASFRAFESYLLATLMYLGFSLVI 216 >gi|296111214|ref|YP_003621595.1| glutamine ABC transporter, substrate binding and permease protein [Leuconostoc kimchii IMSNU 11154] gi|295832745|gb|ADG40626.1| glutamine ABC transporter, substrate binding and permease protein [Leuconostoc kimchii IMSNU 11154] Length = 482 Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 49/159 (30%), Positives = 82/159 (51%), Gaps = 23/159 (14%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 + LPL+ ++ F+ GLP+++ + + P F + I L Sbjct: 328 RGLPLMVLAFFIYIGLPSVIGMKI-----------------------PAFTAGLITLILN 364 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 A+ A VR G AV RGQMEAA +LGL++ K+ R V++PQ ++ +IP +Q++ LK Sbjct: 365 EGAYTAAFVRGGFEAVDRGQMEAARSLGLSYSKSMRKVIVPQGLKIMIPSFINQFIITLK 424 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375 ++S+ A+G +L G I+++ Q + I IYL Sbjct: 425 DTSILSAIGILELTQTGSLIVSRNSQGFRVWAIVAVIYL 463 >gi|159899278|ref|YP_001545525.1| polar amino acid ABC transporter inner membrane subunit [Herpetosiphon aurantiacus ATCC 23779] gi|159892317|gb|ABX05397.1| polar amino acid ABC transporter, inner membrane subunit [Herpetosiphon aurantiacus ATCC 23779] Length = 269 Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 55/152 (36%), Positives = 88/152 (57%), Gaps = 5/152 (3%) Query: 229 IFGLPTLVLIALKYQLHFD-KPVLGQFNFIGGSTVSPEFMS-LYIALSCYTAAFIAEIVR 286 I G+P LVLI + + F P L + I G ++ + IAL AA+IAEI R Sbjct: 102 IRGVPILVLI---FTISFAIVPALSDWITINGQKLTVSLTARAIIALVLIYAAYIAEIFR 158 Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346 +G+ ++ RGQMEAA +LG+TH +A R V+LPQA R+++P L + + +LK+SSL +G Sbjct: 159 AGIESISRGQMEAARSLGMTHGQAMRYVILPQAFRNVLPALGNDLIAILKDSSLVSVLGV 218 Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378 ++ V ++ + + E I YL+++ Sbjct: 219 REITQVSRLSVSSSFKYEETYFILTAFYLTMT 250 >gi|326328668|ref|ZP_08195008.1| amino acid ABC transporter, permease protein [Nocardioidaceae bacterium Broad-1] gi|325953629|gb|EGD45629.1| amino acid ABC transporter, permease protein [Nocardioidaceae bacterium Broad-1] Length = 298 Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 53/168 (31%), Positives = 96/168 (57%), Gaps = 3/168 (1%) Query: 228 LIFGLPTLVLIALKYQLHFDKPVL--GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285 L+ G+P LV + + L + P L G ++ ++P + I LS + +A++AEI+ Sbjct: 113 LLRGVPPLVQLIFWFNLAYLVPRLSVGFASWSVNDLITP-LTAAIIGLSLHESAYMAEII 171 Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345 R+G+++V GQ +AA A+G + R+ V+LPQA+R I+PP SQ++ LLK +SL + Sbjct: 172 RAGIMSVDSGQRDAARAMGYSGRQTFWKVVLPQALRVIVPPSGSQFIALLKGTSLVSVIT 231 Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393 DL+ I +T Q + ++L+ + YL + ++ L R+ ++ Sbjct: 232 LTDLLYSVQIIYGRTYQVVPLLLVAVIWYLIVVTLLTLVQRRIERRLG 279 >gi|167564742|ref|ZP_02357658.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia oklahomensis EO147] gi|167574722|ref|ZP_02367596.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia oklahomensis C6786] Length = 248 Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 74/216 (34%), Positives = 112/216 (51%), Gaps = 19/216 (8%) Query: 185 TNAKIFVFSFVLGIVLSL--FATRLSRHFHEKTGKALPLLYISTFLIF-GLPTLVLIALK 241 T +F S VLG +LS+ A R+S H+ LYI LIF G P L+ + L Sbjct: 21 TTLGLFFSSLVLGGLLSIAVVAMRVSPHWLPNR---FARLYI---LIFRGSPLLIQMFLV 74 Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYI----ALSCYTAAFIAEIVRSGLIAVPRGQM 297 Y LGQF I S + P YI +L+ TA + AEI+R GL+AVP GQ+ Sbjct: 75 YY------GLGQFGVIRESFMWPMLRDPYICAVLSLALCTAGYTAEIIRGGLMAVPVGQI 128 Query: 298 EAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII 357 EA A+GL+ R V+ P A+R +P +++ + L+K+++LA V ++ V II Sbjct: 129 EAGYAIGLSGFALLRRVIGPIALRQCLPAYSTEAVLLVKSTALASLVTVWEVTGVAQQII 188 Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393 QT + E+ + IYL L+ +I + L +++ Sbjct: 189 QQTYRTTEVFVCAALIYLGLNFVIVRVLGALEWRLS 224 >gi|166366535|ref|YP_001658808.1| amino acid ABC-transporter permease protein [Microcystis aeruginosa NIES-843] gi|166088908|dbj|BAG03616.1| amino acid ABC-transporter permease protein [Microcystis aeruginosa NIES-843] Length = 331 Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 74/232 (31%), Positives = 115/232 (49%), Gaps = 25/232 (10%) Query: 168 GMFLNN---RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224 G+FL LS LT+ + SF LG++L+L R + L + YI Sbjct: 117 GLFLKAIPLDDLSGLILTLLVAIASMILSFPLGVLLAL-----GRQSELPAIRWLSIGYI 171 Query: 225 STFLIFGLPTL-VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIA-LSCYTAAFIA 282 L+ GLP L +L + L P + PE + IA + + AA++A Sbjct: 172 E--LLRGLPLLGILFMAQVMLPLILP----------AGTRPERVIRAIAGFTLFAAAYLA 219 Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342 E VR GL A+P+GQ+EAA ALGL L++LPQA++++IP + Q+++L K++SL Sbjct: 220 ENVRGGLQAIPKGQIEAAKALGLKPIFVLLLIVLPQALKAVIPAIVGQFISLFKDTSLLA 279 Query: 343 AVGFADLVSVGGTIINQT---GQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 VG DL+ + G+++ G E+ L FIY ++L RL + Sbjct: 280 IVGLVDLLGMAGSVLANPKFIGDYPEVYLFLAFIYWIFCYSMSLASRRLEQR 331 >gi|33594683|ref|NP_882327.1| putative amino acid ABC transporter permease protein [Bordetella pertussis Tohama I] gi|33598477|ref|NP_886120.1| putative amino acid ABC transporter permease protein [Bordetella parapertussis 12822] gi|33603420|ref|NP_890980.1| putative amino acid ABC transporter permease protein [Bordetella bronchiseptica RB50] gi|33564759|emb|CAE44084.1| putative amino acid ABC transporter permease protein [Bordetella pertussis Tohama I] gi|33574606|emb|CAE39256.1| putative amino acid ABC transporter permease protein [Bordetella parapertussis] gi|33577544|emb|CAE34809.1| putative amino acid ABC transporter permease protein [Bordetella bronchiseptica RB50] Length = 366 Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 65/179 (36%), Positives = 96/179 (53%), Gaps = 18/179 (10%) Query: 172 NNRGLSFP-TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230 N R P TL + T F F G++L+L R KAL ++YI LI Sbjct: 153 NARWGGLPLTLILATFGIALAFPF--GVLLAL-----GRRSRMPAIKALCVVYIE--LIR 203 Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290 G+P + L+ F V+ G ++ + + IA+ + AA+IAE VR GL Sbjct: 204 GVPLISLL-------FMSSVMLPLFLPEGFSID-KLLRAQIAIIMFAAAYIAETVRGGLQ 255 Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349 A+P+GQ E A +LGLT+ + R V+LPQA++ +IPPL S ++ L K++SL V +G DL Sbjct: 256 AIPKGQYEGADSLGLTYWQQMRKVILPQALKIVIPPLVSIFIALFKDTSLVVIIGIFDL 314 >gi|152974179|ref|YP_001373696.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152022931|gb|ABS20701.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus cytotoxicus NVH 391-98] Length = 230 Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 47/128 (36%), Positives = 76/128 (59%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IAL+ + A+I EI R + +V RGQ+EAA +LG+++ A R ++LPQA R IPPL +Q Sbjct: 89 IALAIHNGAYITEIFRGSIQSVDRGQLEAARSLGMSYPLAMRRIILPQAFRLSIPPLGNQ 148 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++ LK+SSL VG ++L G +I Q + ++ YL L ++ F+N L Sbjct: 149 FIIGLKDSSLVAYVGMSELWGSGLSIAAGNYQQLNTYIVVGIYYLVLVLLFTYFVNLLEK 208 Query: 391 KIALKEKK 398 +++ K+ Sbjct: 209 RLSRKQSN 216 >gi|322833420|ref|YP_004213447.1| polar amino acid ABC transporter inner membrane subunit [Rahnella sp. Y9602] gi|321168621|gb|ADW74320.1| polar amino acid ABC transporter, inner membrane subunit [Rahnella sp. Y9602] Length = 231 Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 44/107 (41%), Positives = 68/107 (63%) Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322 + EF+ AL AA+ +E +RSGL A+P GQ EA+ ALG+++ ++ R V+LPQ +R+ Sbjct: 96 NAEFLFSMFALGLCQAAYFSEDIRSGLRAIPEGQTEASRALGMSYTRSLRSVILPQGIRN 155 Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369 +P L + + L KN+SLA+ +G A+L V I NQT + E L+ Sbjct: 156 ALPSLLNHTVLLFKNTSLAMVIGVAELTYVTRDIENQTFRTFESYLV 202 Score = 36.6 bits (83), Expect = 6.4, Method: Compositional matrix adjust. Identities = 26/93 (27%), Positives = 41/93 (44%), Gaps = 6/93 (6%) Query: 84 SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143 + I+ G V T LA + A I L+ RL+ + + R YV RN+P L+ Sbjct: 12 QFGQMIVDGMVVTLKLALGSWLLAMCIALLLVVIRLTHKRAAEYFVRAYVSYHRNVPTLI 71 Query: 144 VIFFLYKSVLSVLP------IPDHSIVLPFGMF 170 + Y ++ ++LP I D + F MF Sbjct: 72 QLMMWYFAIPTLLPESVQMWINDFNAEFLFSMF 104 >gi|302187471|ref|ZP_07264144.1| amino acid ABC transporter permease [Pseudomonas syringae pv. syringae 642] Length = 229 Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 66/191 (34%), Positives = 101/191 (52%), Gaps = 17/191 (8%) Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239 TLT++ A +L I + + R SRH+ + ALP YI F G P LV + Sbjct: 18 TLTLELVAIAVTAGLILAIPMGI--ARASRHWPVR---ALPYAYI--FFFRGTPLLVQLF 70 Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295 L Y L QF + S + P F + ++ +TAA+IAEI+R + AVP G Sbjct: 71 LVYY------GLAQFESVRQSALWPYLRDPFWCAVVTMTLHTAAYIAEILRGAMQAVPPG 124 Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355 ++EAA ALG++ KA ++LP+A R +P +++ + +LK S+LA V +L + T Sbjct: 125 EVEAARALGMSKWKALFYIVLPRAARIGLPAYSNEVILMLKASALASTVTLLELTGMART 184 Query: 356 IINQTGQAIEI 366 II +T +EI Sbjct: 185 IIARTYLPVEI 195 >gi|300715818|ref|YP_003740621.1| Polar amino acid ABC transporter, inner membrane subunit [Erwinia billingiae Eb661] gi|299061654|emb|CAX58770.1| Polar amino acid ABC transporter, inner membrane subunit [Erwinia billingiae Eb661] Length = 324 Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 52/170 (30%), Positives = 91/170 (53%), Gaps = 16/170 (9%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLH-----------FDKPVLGQFNFIGGSTVSPE 265 + L LYI + G P LV + Y + FD P+ +N ++P Sbjct: 107 RGLSGLYI--WFFRGTPLLVQLIFWYNMSTLFPKITLGIPFDGPIFASWN--TNDLITP- 161 Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 + L+ AA++AEI+R+GL +V GQ+E A G++ +A R +++PQAMRSIIP Sbjct: 162 LTAAIAGLALNEAAYMAEIIRAGLQSVDNGQVETTQAFGMSRARALRRIIIPQAMRSIIP 221 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375 P +Q ++++K +SL + DL+ ++ N+T + I ++++ + YL Sbjct: 222 PTGNQLISMIKATSLVSVIAMGDLLYSVQSVYNRTFEVIPMLMVAVIWYL 271 >gi|302525506|ref|ZP_07277848.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces sp. AA4] gi|302434401|gb|EFL06217.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces sp. AA4] Length = 215 Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 55/155 (35%), Positives = 84/155 (54%), Gaps = 30/155 (19%) Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279 PL + FL+F P L ++ + Y F + +AL+ YT+A Sbjct: 62 PLTLVFAFLVFAYPLLDIVKIDY-----------------------FPTAAVALTIYTSA 98 Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339 FI E+VRSG+ VP GQ EA ALGL+ + ++LPQA+RS++PPL S + LLKN++ Sbjct: 99 FICEVVRSGINTVPLGQAEAGRALGLSSGQILGGIVLPQALRSVVPPLVSMLIALLKNTT 158 Query: 340 LAVAVGFADLVSVGGTI---INQTGQAIEIILIWM 371 +A GF+ V+ G I +++ G I L+W+ Sbjct: 159 --IASGFS--VAEAGAIRQYVSERGDNQMIALLWV 189 >gi|322833910|ref|YP_004213937.1| polar amino acid ABC transporter inner membrane subunit [Rahnella sp. Y9602] gi|321169111|gb|ADW74810.1| polar amino acid ABC transporter, inner membrane subunit [Rahnella sp. Y9602] Length = 327 Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 56/176 (31%), Positives = 95/176 (53%), Gaps = 23/176 (13%) Query: 222 LYISTFLIFGLPTLVLIALKYQLH--FDKPVLGQFNFIGGSTVSPEFMSLYI-------- 271 LYI + G P LV + Y + F + VLG PE+MS Sbjct: 115 LYI--WFFRGTPLLVQLLFWYNMSTLFPRVVLG-------VPFGPEYMSWNTNDLITPLT 165 Query: 272 ----ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327 L+ AA++AEI+R+GL++V GQ E A A G++ +A R +++PQAMRSIIPP Sbjct: 166 AAIAGLALNEAAYMAEIIRAGLLSVDNGQAETAQAFGMSRGRALRRIIIPQAMRSIIPPT 225 Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 +Q ++++K +SL + DL+ T+ N+T + + ++++ + YL ++ ++ L Sbjct: 226 GNQLISMIKATSLVSVIAMGDLLYSVQTVYNRTFEVVPMLMVAVIWYLFITSLLNL 281 >gi|289705234|ref|ZP_06501633.1| ABC transporter, permease protein [Micrococcus luteus SK58] gi|289557984|gb|EFD51276.1| ABC transporter, permease protein [Micrococcus luteus SK58] Length = 305 Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 49/164 (29%), Positives = 96/164 (58%), Gaps = 5/164 (3%) Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291 +P LV++ YQL G G + ++ AL+ Y + IAE+VRSG+ + Sbjct: 126 VPVLVMMVFFYQLFAQVARTGAIQPQDG-----PYYAVIAALTLYNGSVIAELVRSGVRS 180 Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 +PRGQ EAA A+G+T ++ RLV +PQA+ +++P L SQ++ +LK+S+L +GF +L+ Sbjct: 181 LPRGQREAAAAVGMTSTQSLRLVEVPQALIAMLPSLLSQFVVILKDSALGYLIGFFELLQ 240 Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395 + + G ++ +++ I++ ++ ++ RL+ +++ + Sbjct: 241 YARQLGSGNGNILQSLVVAAVIFIVINFLLTWAATRLSRRLSSR 284 >gi|328464936|gb|EGF36224.1| glutamine ABC transporter substrate binding/permease protein [Lactobacillus helveticus MTCC 5463] Length = 473 Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 65/202 (32%), Positives = 107/202 (52%), Gaps = 22/202 (10%) Query: 189 IFVFSFVLGIVLSLFAT--RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246 I VFS ++GIVL + RLS++ K + + YI I G P +V I Y Sbjct: 280 ITVFSVLIGIVLGMLLALMRLSKN---KLLHWIAVCYIE--FIRGTPQMVQILFVY---- 330 Query: 247 DKPVLGQFNFIGGSTVS--PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304 F G+ +S ++ IA+ + A++AE +RSG+ +V +GQ EAA +LG Sbjct: 331 ---------FGVGALISNLSALVAGIIAIGLNSGAYVAEDIRSGIASVAKGQTEAARSLG 381 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364 L+ KA R V++PQA+++I P L ++++ LLK+SSL +G +L+ I T + + Sbjct: 382 LSQAKAYRYVIIPQALKNIWPALDNEFITLLKDSSLVSVIGVTELMYQTELIQTSTYRGV 441 Query: 365 EIILIWMFIYLSLSIMIALFMN 386 + I M IY ++ + +N Sbjct: 442 LPLFIAMIIYFIMTFTLTRLLN 463 Score = 43.5 bits (101), Expect = 0.058, Method: Compositional matrix adjust. Identities = 32/107 (29%), Positives = 52/107 (48%), Gaps = 5/107 (4%) Query: 44 CVNNVYNNMEKSNLSLGIGFLSERAGF-EIDQGIVPYTSDSSYATAILVGFVNTFWLAFS 102 VN + +EK +L + +L E A + + Q I + + YA + G T + Sbjct: 228 AVNKTISRVEKEDL-INKKYLPEAAKYMKTAQKI---NTMAKYAPYFVKGTEYTIIITVF 283 Query: 103 GMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 ++ ++G L+ RLS NKL+ WI Y+E R P +V I F+Y Sbjct: 284 SVLIGIVLGMLLALMRLSKNKLLHWIAVCYIEFIRGTPQMVQILFVY 330 >gi|311109072|ref|YP_003981925.1| general L-amino acid transporter permease AAPM [Achromobacter xylosoxidans A8] gi|310763761|gb|ADP19210.1| general L-amino acid transport system permease protein AAPM [Achromobacter xylosoxidans A8] Length = 366 Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 63/178 (35%), Positives = 97/178 (54%), Gaps = 16/178 (8%) Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231 N R P LT+ + F+F +G++L+L R KAL ++YI LI G Sbjct: 153 NARWGGLP-LTLILSTFGIAFAFPIGVLLAL-----GRRSKMPAIKALCVVYIE--LIRG 204 Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291 +P LI+L + P+ F+ + + IA+ + AA+IAE VR GL A Sbjct: 205 VP---LISLLFMSSVMLPL-----FLPEGFSIDKLLRAQIAIIMFAAAYIAETVRGGLQA 256 Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349 +P+GQ E A +LGL + + R ++LPQA++ +IPPL S ++ L K++SL V +G DL Sbjct: 257 IPKGQYEGADSLGLNYWQQMRKIILPQALKIVIPPLVSIFIALFKDTSLVVIIGIFDL 314 >gi|229587793|ref|YP_002869912.1| putative amino acid ABC transporter membrane protein [Pseudomonas fluorescens SBW25] gi|229359659|emb|CAY46507.1| putative amino acid ABC transport-system, membrane protein [Pseudomonas fluorescens SBW25] Length = 219 Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 50/135 (37%), Positives = 78/135 (57%), Gaps = 10/135 (7%) Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291 +P LV + Y L F P+ F G S P F + LS + A+ + E+VR L + Sbjct: 66 IPVLVWL---YLLFFGLPI-----FFGLSI--PSFWCAVLVLSLWGASEVGEVVRGALHS 115 Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 +PRGQ EA +++GL+ + VLLPQA++ + PP + Y ++K SSLAV +G D++ Sbjct: 116 LPRGQREAGLSIGLSDPQLYGYVLLPQALKRMTPPTINVYTRIIKTSSLAVLIGVVDVIK 175 Query: 352 VGGTIINQTGQAIEI 366 VG II +T +++ I Sbjct: 176 VGQQIIERTYESVLI 190 Score = 36.6 bits (83), Expect = 6.3, Method: Compositional matrix adjust. Identities = 21/58 (36%), Positives = 34/58 (58%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 G T ++F + +T+ G L G R N+L+ + RVY+E+FR IP LV ++ L+ Sbjct: 19 GAAQTLSISFLSIAFSTVGGVLYGVLRTLNNRLINAVLRVYLELFRAIPVLVWLYLLF 76 >gi|303247516|ref|ZP_07333788.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio fructosovorans JJ] gi|302491212|gb|EFL51104.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio fructosovorans JJ] Length = 269 Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 43/133 (32%), Positives = 82/133 (61%), Gaps = 4/133 (3%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P+ ++ I++S A++ E+ R+G+ A+P GQ EAA +LG + V+LPQA R+I Sbjct: 135 PDLLAAVISMSVCYGAYMGEVFRAGITAIPIGQTEAARSLGFNRAQTMYHVILPQAWRTI 194 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE----IILIWMFIYLSLSI 379 +PP+ ++++ LLK++SL +G ADL+ G +++ + E + +I++ I L LS Sbjct: 195 LPPVGNEFIALLKDTSLVSILGVADLLRRGREYASESFEYFETFTMVAVIYLIITLILSK 254 Query: 380 MIALFMNRLNAKI 392 ++++ RL+ + Sbjct: 255 LVSIMEERLSHHV 267 Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust. Identities = 18/46 (39%), Positives = 30/46 (65%) Query: 115 GAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPD 160 G GR+S NK + + YVEV R +P LV +F++Y ++ ++ +PD Sbjct: 91 GLGRISRNKYINLVASTYVEVVRGVPLLVQLFYIYYALGRMVQVPD 136 >gi|262368884|ref|ZP_06062213.1| ABC glutamate/aspartate transporter [Acinetobacter johnsonii SH046] gi|262316562|gb|EEY97600.1| ABC glutamate/aspartate transporter [Acinetobacter johnsonii SH046] Length = 247 Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 45/127 (35%), Positives = 76/127 (59%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 +S I L +TAA + E VR+G+ A+P GQ+ A A+G + + R V+LPQ+ R+I+P Sbjct: 111 LISASIGLGLFTAARVCEQVRTGIEALPTGQVNAGYAMGFSTAQLYRYVILPQSFRTILP 170 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PL+S+ N +KN+S+A VG ++++S TI T IEI I++ +++ + M Sbjct: 171 PLSSELTNCVKNTSVASLVGVSEIISQMKTISEYTQNTIEIYTYVTIIFIVINVCLITLM 230 Query: 386 NRLNAKI 392 L ++ Sbjct: 231 TLLEKRL 237 Score = 42.7 bits (99), Expect = 0.11, Method: Compositional matrix adjust. Identities = 28/81 (34%), Positives = 43/81 (53%) Query: 82 DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141 DS+Y + IL+G F +A A ++G+++G R NK I YV +FRN+P Sbjct: 18 DSTYLSWILIGLGWLFVIAIVAWSIAMVLGSILGIMRTLPNKTARSIGTGYVTIFRNVPL 77 Query: 142 LVVIFFLYKSVLSVLPIPDHS 162 L+ +F + V + LP P S Sbjct: 78 LIQLFIWFYVVPNFLPGPIKS 98 >gi|257878165|ref|ZP_05657818.1| amino acid ABC transporter [Enterococcus faecium 1,230,933] gi|257881051|ref|ZP_05660704.1| amino acid ABC transporter [Enterococcus faecium 1,231,502] gi|257884712|ref|ZP_05664365.1| amino acid ABC transporter [Enterococcus faecium 1,231,501] gi|257889636|ref|ZP_05669289.1| amino acid ABC transporter [Enterococcus faecium 1,231,410] gi|257892424|ref|ZP_05672077.1| amino acid ABC transporter [Enterococcus faecium 1,231,408] gi|260559212|ref|ZP_05831398.1| amino acid ABC transporter [Enterococcus faecium C68] gi|261207745|ref|ZP_05922430.1| amino acid ABC transporter [Enterococcus faecium TC 6] gi|289565820|ref|ZP_06446262.1| glutamine ABC transporter permease glnP [Enterococcus faecium D344SRF] gi|293563128|ref|ZP_06677593.1| glutamate/aspartate transport system permease protein GltK [Enterococcus faecium E1162] gi|294614006|ref|ZP_06693936.1| glutamate/aspartate transport system permease protein GltK [Enterococcus faecium E1636] gi|294617099|ref|ZP_06696765.1| glutamate/aspartate transport system permease protein GltK [Enterococcus faecium E1679] gi|294623310|ref|ZP_06702172.1| glutamate/aspartate transport system permease protein GltK [Enterococcus faecium U0317] gi|314939891|ref|ZP_07847097.1| ABC transporter, permease protein [Enterococcus faecium TX0133a04] gi|314943738|ref|ZP_07850477.1| ABC transporter, permease protein [Enterococcus faecium TX0133C] gi|314949694|ref|ZP_07853012.1| ABC transporter, permease protein [Enterococcus faecium TX0082] gi|314953240|ref|ZP_07856179.1| ABC transporter, permease protein [Enterococcus faecium TX0133A] gi|314993680|ref|ZP_07859028.1| ABC transporter, permease protein [Enterococcus faecium TX0133B] gi|314997403|ref|ZP_07862354.1| ABC transporter, permease protein [Enterococcus faecium TX0133a01] gi|257812393|gb|EEV41151.1| amino acid ABC transporter [Enterococcus faecium 1,230,933] gi|257816709|gb|EEV44037.1| amino acid ABC transporter [Enterococcus faecium 1,231,502] gi|257820550|gb|EEV47698.1| amino acid ABC transporter [Enterococcus faecium 1,231,501] gi|257825996|gb|EEV52622.1| amino acid ABC transporter [Enterococcus faecium 1,231,410] gi|257828803|gb|EEV55410.1| amino acid ABC transporter [Enterococcus faecium 1,231,408] gi|260074969|gb|EEW63285.1| amino acid ABC transporter [Enterococcus faecium C68] gi|260078128|gb|EEW65834.1| amino acid ABC transporter [Enterococcus faecium TC 6] gi|289162363|gb|EFD10221.1| glutamine ABC transporter permease glnP [Enterococcus faecium D344SRF] gi|291593113|gb|EFF24692.1| glutamate/aspartate transport system permease protein GltK [Enterococcus faecium E1636] gi|291596636|gb|EFF27863.1| glutamate/aspartate transport system permease protein GltK [Enterococcus faecium E1679] gi|291597278|gb|EFF28467.1| glutamate/aspartate transport system permease protein GltK [Enterococcus faecium U0317] gi|291604906|gb|EFF34375.1| glutamate/aspartate transport system permease protein GltK [Enterococcus faecium E1162] gi|313588538|gb|EFR67383.1| ABC transporter, permease protein [Enterococcus faecium TX0133a01] gi|313591854|gb|EFR70699.1| ABC transporter, permease protein [Enterococcus faecium TX0133B] gi|313594706|gb|EFR73551.1| ABC transporter, permease protein [Enterococcus faecium TX0133A] gi|313597601|gb|EFR76446.1| ABC transporter, permease protein [Enterococcus faecium TX0133C] gi|313640854|gb|EFS05434.1| ABC transporter, permease protein [Enterococcus faecium TX0133a04] gi|313643952|gb|EFS08532.1| ABC transporter, permease protein [Enterococcus faecium TX0082] Length = 218 Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 56/166 (33%), Positives = 92/166 (55%), Gaps = 14/166 (8%) Query: 228 LIFGLPTLVLIALKYQLHFDKPVLG-QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286 +I LP L++I Y F P +G Q N F S AL+ + +A ++EI R Sbjct: 61 IIRNLPLLLIIFFTY---FALPQIGIQMNI---------FWSAVAALTIFESAMLSEIFR 108 Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346 +GL AVP+GQMEA ++ GLT+ ++ R ++LPQA +S+IP + SQ ++L+K++SLAV + Sbjct: 109 AGLNAVPKGQMEAGLSTGLTYVESMRTIVLPQAFKSMIPAIVSQLISLIKDTSLAVIISL 168 Query: 347 ADLVSVGGTIINQ-TGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 +L I Q T + + +I +Y + ++L L + Sbjct: 169 PELSHQARIIYGQNTNYVLPMFIIMTLMYFVVCYALSLLSGYLEKR 214 >gi|229031184|ref|ZP_04187194.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus AH1271] gi|228730223|gb|EEL81193.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus AH1271] Length = 222 Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 66/222 (29%), Positives = 114/222 (51%), Gaps = 21/222 (9%) Query: 177 SFPTL------TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230 SFP L T+ + SFV+GI L++ ++ + + +YIS F Sbjct: 11 SFPQLFKYVYITLGITLVSMIISFVIGIGLAIVTKNKTKFLYP-----IVRVYISFFR-- 63 Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290 G P LV + + L+F P TV + I LS AA+++EI+R L Sbjct: 64 GTPLLVQL---FVLYFGLP-----QIFPTFTVLTAMQATLIGLSLNNAAYLSEIIRGSLN 115 Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 AV GQM+A +++G+T +A R ++ PQA+R +P L + ++ LLK SSL+ A+G A+++ Sbjct: 116 AVESGQMDACLSVGMTKAQAMRQIIFPQAIRVAVPSLGNNFVGLLKESSLSFALGVAEIL 175 Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 + + Q+ + +E L +Y ++I+I+ +L K+ Sbjct: 176 AQAKMLAAQSYRYMESYLAVAIVYWIITIVISWGQKKLEKKL 217 >gi|126737593|ref|ZP_01753323.1| putative amino acid ABC transporter, permease protein [Roseobacter sp. SK209-2-6] gi|126720986|gb|EBA17690.1| putative amino acid ABC transporter, permease protein [Roseobacter sp. SK209-2-6] Length = 253 Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 58/213 (27%), Positives = 109/213 (51%), Gaps = 24/213 (11%) Query: 191 VFSFVLGIVLSLFATRLSRHF------HEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244 V S VLG++++L SR + + + +++PLL + ++ +GLP + Sbjct: 58 VISIVLGLIVALPGLAKSRWWRMVNRVYVELVRSIPLLPMLFWVFYGLPII--------- 108 Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304 F +G + F I L+ +AF AEI R+G+ ++ +GQ EAA +G Sbjct: 109 ---------FREMGMNVPIDPFWGAIITLALSDSAFTAEIYRAGIQSIAKGQTEAAQTIG 159 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364 L + + R V+LPQA+R I+PPL +Q++ ++K S+ A +G +L ++ + + Sbjct: 160 LNYLQTMRYVILPQAIRRILPPLANQFIYIVKMSAFASVIGMQELTRRANELVVTEYRPL 219 Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 EI + + YL L ++I+ + L ++ E+ Sbjct: 220 EIYSLLILEYLILVLIISAGVRWLERRMGSDER 252 >gi|297162527|gb|ADI12239.1| ABC transporter, permease [Streptomyces bingchenggensis BCW-1] Length = 275 Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 45/123 (36%), Positives = 76/123 (61%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I L+ + A+IAE++RSGL+AVP GQ +AA LGLT + + LPQA+R I+PPL ++ Sbjct: 133 IGLTLHETAYIAELIRSGLLAVPDGQRQAAATLGLTPGQTFFRITLPQALRVIVPPLGNE 192 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++LLK +SL + ADL+ I + Q + ++++ Y+ ++ +I L RL Sbjct: 193 LISLLKATSLVSVISLADLLYSVQLIYAKNFQTVPLLIVAAIWYMIITGLITLLQQRLER 252 Query: 391 KIA 393 +++ Sbjct: 253 RLS 255 >gi|260464193|ref|ZP_05812386.1| polar amino acid ABC transporter, inner membrane subunit [Mesorhizobium opportunistum WSM2075] gi|259029996|gb|EEW31279.1| polar amino acid ABC transporter, inner membrane subunit [Mesorhizobium opportunistum WSM2075] Length = 269 Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 44/109 (40%), Positives = 73/109 (66%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +AL+ +AFI+E+ R+G+ AV +GQ+EAA ALGL+ + RL++ PQA+R+I+PPL + Sbjct: 142 MALTIGYSAFISEVFRAGIQAVEKGQIEAAKALGLSRAQRFRLIVFPQAIRTILPPLGND 201 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379 ++ L+K+SSL +G AD+ +G + + E I +IYL L++ Sbjct: 202 FVALVKDSSLVSVLGVADITQMGKVYAAGSFRFFETYSITAYIYLILTV 250 >gi|239918033|ref|YP_002957591.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Micrococcus luteus NCTC 2665] gi|239839240|gb|ACS31037.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Micrococcus luteus NCTC 2665] Length = 295 Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 49/164 (29%), Positives = 96/164 (58%), Gaps = 5/164 (3%) Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291 +P LV++ YQL G G + ++ AL+ Y + IAE+VRSG+ + Sbjct: 116 VPVLVMMVFFYQLFAQVARSGAIQPQDG-----PYYAVIAALTLYNGSVIAELVRSGVRS 170 Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 +PRGQ EAA A+G+T ++ RLV +PQA+ +++P L SQ++ +LK+S+L +GF +L+ Sbjct: 171 LPRGQREAAAAVGMTSTQSLRLVEVPQALIAMLPSLLSQFVVILKDSALGYLIGFFELLH 230 Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395 + + G ++ +++ I++ ++ ++ RL+ +++ + Sbjct: 231 YARQLGSGNGNILQSLVVAAMIFIVINFLLTWAATRLSRRLSSR 274 >gi|187925333|ref|YP_001896975.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia phytofirmans PsJN] gi|187716527|gb|ACD17751.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia phytofirmans PsJN] Length = 225 Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 41/126 (32%), Positives = 77/126 (61%) Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327 S +A S + AA+ +EI+R+G+ +V RGQ+ A+ ALG+T+ ++ RL++LPQA R+++P L Sbjct: 99 SAMVAFSLFEAAYYSEIIRAGIQSVARGQVNASFALGMTYAQSMRLIVLPQAFRAMVPLL 158 Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387 +Q + L +++SL + AD I ++ G +E++L Y + ++ + + Sbjct: 159 LTQGIVLFQDTSLVYVISLADFFRTATNIGDRDGTNVEMVLFAGACYFVICVVASSLVKG 218 Query: 388 LNAKIA 393 L K+A Sbjct: 219 LQKKVA 224 >gi|293602097|ref|ZP_06684550.1| amino acid ABC superfamily ATP binding cassette transporter, permease protein [Achromobacter piechaudii ATCC 43553] gi|292819499|gb|EFF78527.1| amino acid ABC superfamily ATP binding cassette transporter, permease protein [Achromobacter piechaudii ATCC 43553] Length = 366 Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 70/230 (30%), Positives = 113/230 (49%), Gaps = 19/230 (8%) Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231 N R P LT+ + F+F +G++L+L R KAL ++YI LI G Sbjct: 153 NARWGGLP-LTLILSTFGIAFAFPIGVLLAL-----GRRSKMPAIKALCVVYIE--LIRG 204 Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291 +P + L+ F V+ G ++ + + IA+ + AA+IAE VR GL A Sbjct: 205 VPLISLL-------FMSSVMLPLFLPEGFSID-KLLRAQIAIILFAAAYIAETVRGGLQA 256 Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV- 350 +P+GQ E A +LGL + + R ++LPQA++ +IPPL S ++ L K++SL V +G DL Sbjct: 257 IPKGQYEGADSLGLNYWQQMRKIILPQALKIVIPPLVSIFIALFKDTSLVVIIGIFDLTL 316 Query: 351 --SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 + G +E L IY ++ + L ++A K+ Sbjct: 317 AAKAALSDAAWRGFGVEAYLFISAIYFVFCFSMSKYSQALEKRLATDHKR 366 >gi|257440502|ref|ZP_05616257.1| glutamine ABC transporter, permease protein [Faecalibacterium prausnitzii A2-165] gi|257197124|gb|EEU95408.1| glutamine ABC transporter, permease protein [Faecalibacterium prausnitzii A2-165] Length = 254 Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 62/235 (26%), Positives = 122/235 (51%), Gaps = 22/235 (9%) Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVL-SLFATRLSRHFHEKTGKALPLL------- 222 LN+R + + + T + + LG+VL S+ A H ++ G+ P+L Sbjct: 34 LNDRWVQYIQ-GVGTTLLVTAIALALGVVLGSVVALVRVAHDQQRPGRRNPVLGFFNAVC 92 Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282 + T +I G P +V + + + F F +G +AL + A+++ Sbjct: 93 QVYTTIIRGTPMMVQLLIMSMVIFSNSR--NFTMVGA-----------LALGINSGAYVS 139 Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342 EI+R GL+AV GQMEA +LGL + ++++PQA+R+++P L ++++ LLK++SL Sbjct: 140 EIIRGGLMAVDPGQMEAGRSLGLNYMTTMVVIVIPQAIRAVLPALGNEFIVLLKDTSLIT 199 Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 +G +L+ I+N+T +A+ +L +YL L ++ +++ ++A ++ Sbjct: 200 VIGGKELLYAAQGIMNRTYEAMFPLLGVAVVYLILVMLFTWLLSKFERRMAQGDR 254 >gi|239826927|ref|YP_002949551.1| polar amino acid ABC transporter inner membrane subunit [Geobacillus sp. WCH70] gi|239807220|gb|ACS24285.1| polar amino acid ABC transporter, inner membrane subunit [Geobacillus sp. WCH70] Length = 216 Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 57/180 (31%), Positives = 97/180 (53%), Gaps = 27/180 (15%) Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273 +T + LPLL I F F LP + L DK F + +AL Sbjct: 60 ETIRNLPLLLIIFFTYFALPEV-------GLKLDK-----------------FYAAIVAL 95 Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333 + +A ++EIVRSGL ++ +GQ+EAA + GLT+ + ++LPQA+R ++PP+ SQ+++ Sbjct: 96 VVFESAMLSEIVRSGLNSIDKGQIEAARSSGLTYIQTLWYIILPQALRRMVPPIVSQFIS 155 Query: 334 LLKNSSLAVAVGFADLVSVGGTIIN--QTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 LLK++SLA+ + +L++ IIN I I ++ +Y ++ ++L RL + Sbjct: 156 LLKDTSLAIVISLPELMN-HAQIINGRNVNYVIPIFILVALMYFVVNYSLSLVSRRLEYR 214 >gi|187927462|ref|YP_001897949.1| polar amino acid ABC transporter inner membrane subunit [Ralstonia pickettii 12J] gi|241661992|ref|YP_002980352.1| polar amino acid ABC transporter inner membrane subunit [Ralstonia pickettii 12D] gi|309779836|ref|ZP_07674591.1| glutamate/aspartate ABC transporter, permease protein [Ralstonia sp. 5_7_47FAA] gi|187724352|gb|ACD25517.1| polar amino acid ABC transporter, inner membrane subunit [Ralstonia pickettii 12J] gi|240864019|gb|ACS61680.1| polar amino acid ABC transporter, inner membrane subunit [Ralstonia pickettii 12D] gi|308921413|gb|EFP67055.1| glutamate/aspartate ABC transporter, permease protein [Ralstonia sp. 5_7_47FAA] Length = 227 Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 43/125 (34%), Positives = 76/125 (60%) Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327 S +A + + AA+ +EI+R+G+ +V RGQM AA A+G+T+ +A RLV+LPQA R++IP L Sbjct: 101 SALVAFALFEAAYYSEIIRAGIQSVSRGQMFAAYAMGMTYGQAMRLVILPQAFRNMIPLL 160 Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387 +Q + L +++SL +D + I + G+ +E++L Y + ++ + R Sbjct: 161 LTQAIVLFQDTSLVYVSALSDFFTQAYNIGERDGRIVELLLFAGLCYFVICFGASVLVKR 220 Query: 388 LNAKI 392 L K+ Sbjct: 221 LQKKV 225 >gi|159037030|ref|YP_001536283.1| polar amino acid ABC transporter, inner membrane subunit [Salinispora arenicola CNS-205] gi|157915865|gb|ABV97292.1| polar amino acid ABC transporter, inner membrane subunit [Salinispora arenicola CNS-205] Length = 325 Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 72/237 (30%), Positives = 122/237 (51%), Gaps = 21/237 (8%) Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEK-TGKALPLLYIS 225 FG+ G+ F T+ + S V+G +L++ +L + TG + PL Y Sbjct: 65 FGLVWERLGIGFKN-TLTAAVLAILTSLVVGTLLAVLRIQLKGLAQRRYTGLSAPLAY-- 121 Query: 226 TFLIFGLPTLVLIALKYQLHFDK--PVLGQFNFIGGSTVSPEF-------MSLYIALSCY 276 L+ GL + + ++ + + PV+ F+ PEF L I L+ Y Sbjct: 122 --LLRGLNLTLSVVTRFCVEVFRGLPVVITIFFVARGF--PEFGVTFDTLWYLVIGLTIY 177 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 + IAEI+RSG+ +P GQ EAA A+GL+ + TR+++LPQA R ++P L SQ + +LK Sbjct: 178 NSVVIAEILRSGMEGLPGGQAEAAAAIGLSPLQTTRMIMLPQAFRIMLPALISQLVVVLK 237 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEI--ILIWMFIYL--SLSIMIALFMNRLN 389 ++SL + + + +++G II I++ +L +FI + SLS + NRL+ Sbjct: 238 DTSLGFIISYEETLNIGKQIIGVLDNPIQVYTVLAVLFIVVNYSLSKLAQAVQNRLS 294 >gi|260578024|ref|ZP_05845947.1| His/Glu/Gln/Arg/opine family amino acid ABC superfamily ATP binding cassette transporter, permease protein [Corynebacterium jeikeium ATCC 43734] gi|258603851|gb|EEW17105.1| His/Glu/Gln/Arg/opine family amino acid ABC superfamily ATP binding cassette transporter, permease protein [Corynebacterium jeikeium ATCC 43734] Length = 315 Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 47/126 (37%), Positives = 78/126 (61%), Gaps = 4/126 (3%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+ + L AA++AEIVR+G+ AVP GQ EA+ ALG+T + R ++PQAMR IIP Sbjct: 152 FILAVLGLGLNEAAYMAEIVRAGIQAVPEGQSEASKALGMTWGQNMRRTVMPQAMRIIIP 211 Query: 326 PLTSQYLNLLKNSSLAVAVGF-ADLVSVGGTIINQTGQAIEIILI---WMFIYLSLSIMI 381 P +++++LLK +SL +AV + A+L I N Q + ++L+ W + S+ +++ Sbjct: 212 PTGNEFISLLKTTSLVIAVPYTAELYGRATDISNSLFQPVPLLLVAATWYLVITSILMVV 271 Query: 382 ALFMNR 387 ++ R Sbjct: 272 QFYVER 277 >gi|302524786|ref|ZP_07277128.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Streptomyces sp. AA4] gi|302433681|gb|EFL05497.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Streptomyces sp. AA4] Length = 297 Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 64/205 (31%), Positives = 107/205 (52%), Gaps = 17/205 (8%) Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252 + VLG++++L RLS + K YI +L GLP L+ I + Y L P + Sbjct: 72 AIVLGVLIALL--RLSAN---PVAKWFAAAYI--WLFRGLPVLLQILIWYNLALIFPTVS 124 Query: 253 -QFNFIGGSTVSP------EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305 F G P F + + L+ +A++AEIVR+GL +V GQ EAA ++G+ Sbjct: 125 IPLPFCGYLVHEPTNVLISAFTAALLGLALNESAYMAEIVRAGLTSVDAGQTEAAKSIGM 184 Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365 T R V+LPQAMR IIPP + ++N+LK +S+A +G +L+ I + +E Sbjct: 185 TPGATLRRVVLPQAMRVIIPPTGNDFINMLKGTSMASVIGVTELIHAANNISSNNLLVME 244 Query: 366 IIL---IWMFIYLSLSIMIALFMNR 387 ++ IW + ++++ + ++ R Sbjct: 245 TLIAAAIWYMVVVTVAGIGQHYLER 269 Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust. Identities = 34/105 (32%), Positives = 50/105 (47%), Gaps = 5/105 (4%) Query: 69 GFEIDQGIVPYTS--DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVA 126 GF + Q + + S D + + +G +NT LA A ++G L+ RLSAN + Sbjct: 32 GFALAQAQIEWGSVPDFVFYRVMALGLLNTVVLAVIAQAIAIVLGVLIALLRLSANPVAK 91 Query: 127 WICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFL 171 W Y+ +FR +P L+ I Y L P SI LPF +L Sbjct: 92 WFAAAYIWLFRGLPVLLQILIWYNLALI---FPTVSIPLPFCGYL 133 >gi|227823732|ref|YP_002827705.1| putative amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Sinorhizobium fredii NGR234] gi|227342734|gb|ACP26952.1| putative amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Sinorhizobium fredii NGR234] Length = 273 Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 65/211 (30%), Positives = 108/211 (51%), Gaps = 38/211 (18%) Query: 190 FVFSFVLGIVLSLFATRLSRH--------FHEKTGKALPLLYISTFLIF-GLPTLVLIAL 240 F + +LG+ ++L A LS H F+ + + +P+L + ++ F G P LV+ Sbjct: 61 FALATLLGLGVALMA--LSEHPALRQIARFYTEVIRGVPILVLLFYIAFVGAPALVV--- 115 Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMS------------LYIALSCYTAAFIAEIVRSG 288 NF+ ++ FM IAL +AFIAE+ R+G Sbjct: 116 ------------AVNFLAAPLITWGFMEPLVVRDISLMWRAIIALMIGYSAFIAEVFRAG 163 Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348 + +V +GQ+EAA LGLT + RLV+ PQA+R I+PPL + ++ ++K+SSL +G AD Sbjct: 164 IQSVDKGQVEAAKTLGLTRYQRFRLVVFPQAIRVILPPLGNDFVAMVKDSSLVSVLGVAD 223 Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379 + +G + + + E I ++YL L+I Sbjct: 224 ITQMGKVYASGSFRFFETYSIVAYVYLILTI 254 >gi|295399080|ref|ZP_06809062.1| polar amino acid ABC transporter, inner membrane subunit [Geobacillus thermoglucosidasius C56-YS93] gi|312110316|ref|YP_003988632.1| polar amino acid ABC transporter inner membrane subunit [Geobacillus sp. Y4.1MC1] gi|294978546|gb|EFG54142.1| polar amino acid ABC transporter, inner membrane subunit [Geobacillus thermoglucosidasius C56-YS93] gi|311215417|gb|ADP74021.1| polar amino acid ABC transporter, inner membrane subunit [Geobacillus sp. Y4.1MC1] Length = 233 Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 60/217 (27%), Positives = 109/217 (50%), Gaps = 37/217 (17%) Query: 188 KIFVFS----FVLGIVLSLFATRLSR--------HFHEKTGKALPLLYISTFLIFGLPTL 235 KI +F+ F LG+VL+L ++ R + + PL+ + FG+P L Sbjct: 38 KIVIFAVLLGFALGVVLALM--KIGRIKVLAWFADAYTSVFRGTPLVLQLVLIYFGIPQL 95 Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295 G + P F S IA +AA+++EI+R+G++A+ +G Sbjct: 96 T----------------------GVDIGP-FPSAVIAFGLNSAAYVSEIIRAGILAIDKG 132 Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355 Q EAA+ALG+ ++ R ++LPQA+++I+P L ++++ L K S++ +G D++ Sbjct: 133 QREAALALGIPYKLMMRDIILPQALKNILPALMNEFITLTKESAVVTVIGAMDVMRRAYI 192 Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 + Q + IE +LI IY L +++ L L ++ Sbjct: 193 VGGQVYRYIEPLLIAGLIYYVLVMLLTLLGKALEGRL 229 >gi|209809241|ref|YP_002264779.1| binding-protein-dependent transport system inner membrane component [Aliivibrio salmonicida LFI1238] gi|208010803|emb|CAQ81200.1| binding-protein-dependent transport system inner membrane component [Aliivibrio salmonicida LFI1238] Length = 264 Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 62/190 (32%), Positives = 100/190 (52%), Gaps = 20/190 (10%) Query: 205 TRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP 264 T L R G++L YI LI P LV I L Y F+ G + Sbjct: 87 TALLRLSDSVVGRSLAKGYIE--LIRNTPLLVQIYLLY-------------FVFGPYLGL 131 Query: 265 E-FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 E F + +AL+ + A+ AEI+RSGL+ +P+GQ EA +LGL+ + R ++LPQ ++ Sbjct: 132 ERFSTAILALALFQGAYTAEILRSGLVNLPKGQFEACRSLGLSSFNSYRYIILPQVIQKT 191 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL----IWMFIYLSLSI 379 +P LT++ ++L+KNSS+ + DL + G I+ T EI I++ + LSLS Sbjct: 192 LPSLTNELVSLVKNSSIVSVMAIFDLTTEGRNIVADTAMPFEIWFSVAAIYLLVTLSLSG 251 Query: 380 MIALFMNRLN 389 + A ++++ Sbjct: 252 LSAWLEHKMH 261 >gi|241206764|ref|YP_002977860.1| polar amino acid ABC transcriptional regulator inner membrane protein [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240860654|gb|ACS58321.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 270 Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 71/211 (33%), Positives = 111/211 (52%), Gaps = 22/211 (10%) Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249 FV + VLG+ + L S+ + + YI +I G+P LVL L Y P Sbjct: 61 FVLATVLGLGICLLGMADSQVLRQ-----IARFYIE--IIRGIPILVL--LFYVAFVGAP 111 Query: 250 VL-GQFNFIGGSTVSPEF--------MSLY----IALSCYTAAFIAEIVRSGLIAVPRGQ 296 L +NF+ V+ +SL IAL+ ++FIAEI R+G +V GQ Sbjct: 112 ALVAAYNFLISPLVTSGMAEPILVRDLSLMWRAIIALTVGYSSFIAEIFRAGFQSVDLGQ 171 Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356 +EAA ALGL+ + R V+ PQA+R I PPL++ +++++K+SSL +G AD+ +G Sbjct: 172 IEAAKALGLSRYRRFRSVVFPQAIRVIFPPLSNDFVSMVKDSSLVSVLGVADITQMGKVY 231 Query: 357 INQTGQAIEIILIWMFIYLSLSIMIALFMNR 387 + + E I +IYL L+I ++L + R Sbjct: 232 AAGSFRFFETYSIVTYIYLILTIGLSLALRR 262 >gi|188591218|ref|YP_001795818.1| glutamate/aspartate transporter; ABC superfamily, membrane component [Cupriavidus taiwanensis LMG 19424] gi|170938112|emb|CAP63098.1| glutamate/aspartate transport protein; ABC superfamily, membrane component [Cupriavidus taiwanensis LMG 19424] Length = 227 Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 44/127 (34%), Positives = 77/127 (60%) Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327 S +A + + AA+ +EI+R+G+ +V RGQM AA ALG+T+ ++ RLV+LPQA R+++P L Sbjct: 101 SALVAFALFEAAYYSEIIRAGIQSVSRGQMFAAQALGMTYGQSMRLVILPQAFRNMVPLL 160 Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387 +Q + L +++SL AD I + G+ +E++L +Y + +L + R Sbjct: 161 LTQGIILFQDTSLVYVSALADFFGQAYGIGERDGRIVEMLLFAGLVYFIICFSASLLVKR 220 Query: 388 LNAKIAL 394 K+A+ Sbjct: 221 YQKKVAV 227 >gi|116254281|ref|YP_770119.1| transmembrane component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] gi|115258929|emb|CAK10038.1| putative transmembrane component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] Length = 270 Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 71/211 (33%), Positives = 111/211 (52%), Gaps = 22/211 (10%) Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249 FV + VLG+ + L S+ + + YI +I G+P LVL L Y P Sbjct: 61 FVLATVLGLGICLLGMADSQVLRQ-----IARFYIE--IIRGIPILVL--LFYVAFVGAP 111 Query: 250 VL-GQFNFIGGSTVSPEF--------MSLY----IALSCYTAAFIAEIVRSGLIAVPRGQ 296 L +NF+ V+ +SL IAL+ ++FIAEI R+G +V GQ Sbjct: 112 ALVAAYNFLISPLVTSGMAEPILVRDLSLMWRAIIALTVGYSSFIAEIFRAGFQSVDLGQ 171 Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356 +EAA ALGL+ + R V+ PQA+R I PPL++ +++++K+SSL +G AD+ +G Sbjct: 172 IEAAKALGLSRYRRFRSVVFPQAIRVIFPPLSNDFVSMVKDSSLVSVLGVADITQMGKVY 231 Query: 357 INQTGQAIEIILIWMFIYLSLSIMIALFMNR 387 + + E I +IYL L+I ++L + R Sbjct: 232 AAGSFRFFETYSIVTYIYLILTIGLSLALRR 262 >gi|319940826|ref|ZP_08015165.1| glutamate/aspartate transport system permease gltJ [Sutterella wadsworthensis 3_1_45B] gi|319805708|gb|EFW02489.1| glutamate/aspartate transport system permease gltJ [Sutterella wadsworthensis 3_1_45B] Length = 244 Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 65/205 (31%), Positives = 107/205 (52%), Gaps = 23/205 (11%) Query: 190 FVFSFVLGIVLSLFAT---RLSRHFHE---KTGKALPLLYISTFLIFGLPTLVLIALKYQ 243 F+ + VLGI++ T ++ R E + + +PL+ F +P ++ + Sbjct: 40 FLLALVLGIIVGTLRTSPIKIVRGACEAWIELFRNIPLIVQIFIWYFVVPEIIPWYKDWM 99 Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 + D P + QF M+ +I + +T++ IAE VR+G+ ++PRG AA AL Sbjct: 100 IEAD-PAIAQF------------MTAFICMGFFTSSRIAEQVRAGIASIPRGLPNAAKAL 146 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363 G T + V+LP AMR I+PPLTS+ +NL+KN+++A+ +G +L + T Q Sbjct: 147 GFTTVETYVYVILPMAMRLIVPPLTSEAMNLVKNTAVAMTIGLPELTMRANEMGENTFQF 206 Query: 364 IEIILIWMFIYLSLSIMIALFMNRL 388 L W I L I+IAL +NR+ Sbjct: 207 FAAYL-WATI---LYIVIALVVNRV 227 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 30/77 (38%), Positives = 42/77 (54%) Query: 81 SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140 SD + IL G T LA S + A ++G +VG R S K+V C ++E+FRNIP Sbjct: 17 SDDPWWRYILDGAGWTVGLAVSAFLLALVLGIIVGTLRTSPIKIVRGACEAWIELFRNIP 76 Query: 141 PLVVIFFLYKSVLSVLP 157 +V IF Y V ++P Sbjct: 77 LIVQIFIWYFVVPEIIP 93 >gi|87121082|ref|ZP_01076973.1| amino acid ABC transporter, permease protein [Marinomonas sp. MED121] gi|86163574|gb|EAQ64848.1| amino acid ABC transporter, permease protein [Marinomonas sp. MED121] Length = 366 Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 64/214 (29%), Positives = 111/214 (51%), Gaps = 24/214 (11%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 V SF LG++L+L R K++ +++I T L T++ +A + P Sbjct: 170 VASFPLGVLLAL-----GRQSSMPIAKSVCIVFIETIRAVPLITILFMA-SVMIPLFLPD 223 Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 FN + M + I ++ ++AA++AE++R GL A+P+GQ EAA A+GLT+ ++ Sbjct: 224 GMNFN---------KLMRVLIGITLFSAAYMAEVIRGGLQAIPKGQYEAADAMGLTYWQS 274 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT------GQAI 364 LV+LPQA++ +IP + + ++ L K+++L VG DL+ G I T G I Sbjct: 275 MVLVILPQALKLVIPGIVNTFIGLFKDTTLVYIVGMFDLL---GRIQAATHDSSWLGTTI 331 Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 E FIY + ++ + R+ K+ K+ Sbjct: 332 EGYAFAGFIYWAACFGMSRYSMRIERKLETGHKR 365 >gi|302391067|ref|YP_003826887.1| amino acid ABC transporter membrane protein [Acetohalobium arabaticum DSM 5501] gi|302203144|gb|ADL11822.1| amino acid ABC transporter membrane protein, PAAT family [Acetohalobium arabaticum DSM 5501] Length = 217 Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 53/175 (30%), Positives = 97/175 (55%), Gaps = 13/175 (7%) Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282 YI F G P LV + + L++ P LG ++P +++ + L + A++ Sbjct: 55 YIEIFR--GTPLLVQL---FILYYGLPSLG-------INLTP-YIAAVLGLGLNSGAYVG 101 Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342 EIVR G+ ++ +GQMEAA ++G+++ ++ R ++LPQA +SI+P L ++++ LLK+SSL Sbjct: 102 EIVRGGIESIDKGQMEAARSVGMSYAQSMRYIILPQAFKSIVPALGNEFIALLKDSSLVS 161 Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 + DL G II++T Q+ I L Y + ++ +N K+ ++ Sbjct: 162 VIAVKDLTRQGRLIISRTYQSFFIFLTVAVFYFIMVFIMTRLVNYAERKLKTSDQ 216 Score = 40.0 bits (92), Expect = 0.59, Method: Compositional matrix adjust. Identities = 16/41 (39%), Positives = 27/41 (65%) Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 I+G ++G R+S N ++ + + Y+E+FR P LV +F LY Sbjct: 32 ILGNVLGLARVSKNPIIGGVAKGYIEIFRGTPLLVQLFILY 72 >gi|258425045|ref|ZP_05687916.1| transport system membrane protein [Staphylococcus aureus A9635] gi|282909732|ref|ZP_06317541.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Staphylococcus aureus subsp. aureus WW2703/97] gi|282911978|ref|ZP_06319774.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Staphylococcus aureus subsp. aureus WBG10049] gi|257844879|gb|EEV68922.1| transport system membrane protein [Staphylococcus aureus A9635] gi|282323674|gb|EFB53990.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Staphylococcus aureus subsp. aureus WBG10049] gi|282326306|gb|EFB56610.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Staphylococcus aureus subsp. aureus WW2703/97] Length = 242 Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 53/155 (34%), Positives = 98/155 (63%), Gaps = 10/155 (6%) Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248 I + +FVLG++++LF T L R K +++ +Y+S +I G P +V + + + + Sbjct: 37 ITLVTFVLGLIIALF-TALMRISTSKVLRSIARVYVS--IIRGTPMIVQL---FIIFYGI 90 Query: 249 PVLGQF---NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305 P LG+ + T++P ++ I LS A+ +EI+R G+I++P+GQ EAA ++G+ Sbjct: 91 PELGRLLTNDADNQWTLAPVVAAI-IGLSLNVGAYASEIIRGGIISIPKGQTEAAYSIGM 149 Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340 T+R+ + ++LPQA+R IP L + +L+L+K++SL Sbjct: 150 TYRQTIQRIILPQAIRVSIPALGNTFLSLIKDTSL 184 >gi|296274225|ref|YP_003656856.1| polar amino acid ABC transporter inner membrane subunit [Arcobacter nitrofigilis DSM 7299] gi|296098399|gb|ADG94349.1| polar amino acid ABC transporter, inner membrane subunit [Arcobacter nitrofigilis DSM 7299] Length = 321 Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 53/179 (29%), Positives = 98/179 (54%), Gaps = 14/179 (7%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 K L +Y++ ++ G P LV I L Y + V F F F++ ++L + Sbjct: 153 KDLATVYVT--IVRGTPLLVQIFLFYFI-----VANIFEF-------DRFVAGVLSLGIF 198 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 A++AEI+R + ++ +GQ+EA+ +LG+++ +A R ++LPQA + +P L + + L+K Sbjct: 199 FGAYMAEILRGAIQSIDKGQLEASKSLGISNFQAMRYIILPQAFKRALPTLIGEMIALVK 258 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395 +SSL + DL VG I+ T E +I +YL ++ +++ +R+ K+ LK Sbjct: 259 DSSLVSVISITDLTKVGKEIVANTFSPFETWIIVALLYLCITSVLSFIGHRIEKKMTLK 317 >gi|113866503|ref|YP_724992.1| ABC transporter permease [Ralstonia eutropha H16] gi|113525279|emb|CAJ91624.1| ABC-type transporter, permease component: PAAT family [Ralstonia eutropha H16] Length = 227 Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 44/127 (34%), Positives = 77/127 (60%) Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327 S +A + + AA+ +EI+R+G+ +V RGQM AA ALG+T+ ++ RLV+LPQA R+++P L Sbjct: 101 SALVAFALFEAAYYSEIIRAGIQSVSRGQMFAAQALGMTYGQSMRLVILPQAFRNMVPLL 160 Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387 +Q + L +++SL AD I + G+ +E++L +Y + +L + R Sbjct: 161 LTQGIILFQDTSLVYVSALADFFGQAYGIGERDGRIVEMLLFAGVVYFVICFSASLLVKR 220 Query: 388 LNAKIAL 394 K+A+ Sbjct: 221 YQKKVAV 227 >gi|281355806|ref|ZP_06242300.1| polar amino acid ABC transporter, inner membrane subunit [Victivallis vadensis ATCC BAA-548] gi|281318686|gb|EFB02706.1| polar amino acid ABC transporter, inner membrane subunit [Victivallis vadensis ATCC BAA-548] Length = 239 Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 55/205 (26%), Positives = 108/205 (52%), Gaps = 16/205 (7%) Query: 195 VLGIVLSLFATRLSRHFHEKTGKALPLLYISTF---LIFGLPTLVLIALKYQLHFDKPVL 251 +LG++L F + R H+KTGK L ++ +I G P +V + + Y + F Sbjct: 48 LLGVLLG-FTVAVIRSTHDKTGKLRLLNWLCKLYLTVIRGTPVVVQLLIIYFVIF----- 101 Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311 GS + + +A + A++AEI+R G++++ +GQ EA +LGL++ + Sbjct: 102 -------GSVNISKILVAIVAFGVNSGAYVAEIIRGGIMSIDKGQFEAGRSLGLSYIQTM 154 Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371 ++LPQA ++++P L ++++ LLK +S++ + DL G I +QT A ++ Sbjct: 155 IYIILPQAFKNVLPALGNEFIVLLKETSVSGYIALQDLTKGGDIIRSQTYTAFMPLIAVA 214 Query: 372 FIYLSLSIMIALFMNRLNAKIALKE 396 IYL++ + + + +L ++ E Sbjct: 215 LIYLAVVMQFSWLLGKLERRLKNNE 239 >gi|323525257|ref|YP_004227410.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia sp. CCGE1001] gi|323382259|gb|ADX54350.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. CCGE1001] Length = 245 Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 49/132 (37%), Positives = 75/132 (56%), Gaps = 1/132 (0%) Query: 264 PEFM-SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322 P+F+ + ++L YT + I E VR+G+ A P GQ AA ALGLT +A R VLLP R+ Sbjct: 108 PQFLLASVVSLGVYTGSRICEQVRAGISARPVGQFHAAFALGLTRTQAYRYVLLPVTFRT 167 Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382 I+ PLTS++L + KNS++A +G +L +++ T Q E + Y+ L+ I Sbjct: 168 ILGPLTSEFLIISKNSAVASTIGLLELSGQARQLVDYTAQPYESFICVTLAYMGLNFAIL 227 Query: 383 LFMNRLNAKIAL 394 M + + AL Sbjct: 228 RGMGWVRRRTAL 239 >gi|257056748|ref|YP_003134580.1| amino acid ABC transporter membrane protein [Saccharomonospora viridis DSM 43017] gi|256586620|gb|ACU97753.1| amino acid ABC transporter membrane protein [Saccharomonospora viridis DSM 43017] Length = 215 Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 47/109 (43%), Positives = 71/109 (65%), Gaps = 7/109 (6%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + +AL+ YTAAF+ E+VRSG+ VP GQ EAA A+GLT + ++LPQA RS++P Sbjct: 85 FWAAVVALTMYTAAFVCEVVRSGINTVPVGQAEAARAIGLTFGQTLSHIVLPQATRSVVP 144 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN---QTGQAIEIILIWM 371 P+ S + LLKN++ +A GF+ V G I N + G ++ + L+W+ Sbjct: 145 PMVSTMIALLKNTT--IAAGFS--VVEAGAIQNYLSERGYSVLVGLLWV 189 >gi|311898347|dbj|BAJ30755.1| putative ABC transporter ATP-binding protein [Kitasatospora setae KM-6054] Length = 337 Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 67/221 (30%), Positives = 117/221 (52%), Gaps = 17/221 (7%) Query: 186 NAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH 245 A + F LG +L++ RLS + ++ L + +L P LV + L Y + Sbjct: 100 TAAVVALGFALGTLLAV--ARLSDNPVLQS-----LSWGFVWLFRATPLLVQLLLWYNIG 152 Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLY-------IALSCYTAAFIAEIVRSGLIAVPRGQME 298 P L GG S + ++L I L+ + AAF AE+VRSG+++V +GQ+E Sbjct: 153 ALYPTLSLSLPFGGELFSVKTVNLLGPVLTTLIGLTLHEAAFAAEVVRSGVLSVDQGQLE 212 Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN 358 AA +LGL + R ++LPQAMR+I+PP + + LK +++ + DL+ I N Sbjct: 213 AASSLGLGRARVLRRIVLPQAMRAILPPAGNMLIGTLKGTAVISVLAVHDLLFSVQVIYN 272 Query: 359 QTGQAIEIILIWMFIYLSLSIMIAL---FMNRLNAKIALKE 396 QT Q I ++L+ Y++++ ++++ ++ R A+ A +E Sbjct: 273 QTYQVIPLLLVATLWYVAVTSVLSVGQYYLERYFARGATRE 313 >gi|153855009|ref|ZP_01996222.1| hypothetical protein DORLON_02228 [Dorea longicatena DSM 13814] gi|149752506|gb|EDM62437.1| hypothetical protein DORLON_02228 [Dorea longicatena DSM 13814] Length = 229 Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 59/228 (25%), Positives = 120/228 (52%), Gaps = 24/228 (10%) Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGK-----ALPLLYI 224 F+++ + T + + VF+ ++G+VL F + R H+KTGK A+ +Y+ Sbjct: 12 FIDDNRWRYITDGLKITLLVTVFAVLIGVVLG-FLIAIVRTTHDKTGKLKILNAICKVYL 70 Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284 + +I G P +V + + Y + F GS + + +A + A++AEI Sbjct: 71 T--VIRGTPVVVQLMIIYFIIF------------GSVDISKVVVAIVAFGINSGAYVAEI 116 Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344 RSG++++ GQ EA +LG + + +++PQA ++++P L +++++LLK +S++ + Sbjct: 117 FRSGIMSIDNGQFEAGRSLGFNYAQTMMYIVMPQAFKNVLPTLCNEFISLLKETSVSGYI 176 Query: 345 GFADLVSVGGTIINQTGQA----IEIILIWMFIYLSLSIMIALFMNRL 388 DL G I ++T A I + LI++ + + + +++L RL Sbjct: 177 ALQDLTKGGDIIRSRTYDAFMPLIAVALIYLAMVMIFTKLVSLLERRL 224 >gi|197118314|ref|YP_002138741.1| amino acid ABC transporter membrane protein [Geobacter bemidjiensis Bem] gi|197087674|gb|ACH38945.1| amino acid ABC transporter, membrane protein [Geobacter bemidjiensis Bem] Length = 272 Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 63/201 (31%), Positives = 109/201 (54%), Gaps = 19/201 (9%) Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252 + +L IV LF T L R + LY+ +I G+P LV Q+ + LG Sbjct: 84 AILLAIVFGLF-TGLGRISKNRFLNGAASLYVE--IIRGIPLLV------QIFYIYYALG 134 Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312 +F + P +S IA++ A++ E+VR+G+ ++ +GQ EAA++LG+ R+ Sbjct: 135 RFVQV------PPILSAIIAMAVCYGAYMGEVVRAGIESIHKGQREAALSLGMNGRQTMI 188 Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE----IIL 368 V+LPQA++ I+PP+ ++++ LLK+SSL + ADL+ G +++ E I L Sbjct: 189 HVILPQAVKVILPPVGNEFIALLKDSSLVSIIAVADLLRRGREFASESFTYFETYTVIAL 248 Query: 369 IWMFIYLSLSIMIALFMNRLN 389 I++ I L S +I + R++ Sbjct: 249 IYLIITLFFSKIIGVMEERVS 269 Score = 45.4 bits (106), Expect = 0.016, Method: Compositional matrix adjust. Identities = 22/68 (32%), Positives = 38/68 (55%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151 G + TF + ++ A + G G GR+S N+ + +YVE+ R IP LV IF++Y + Sbjct: 73 GILVTFQVTLGAILLAIVFGLFTGLGRISKNRFLNGAASLYVEIIRGIPLLVQIFYIYYA 132 Query: 152 VLSVLPIP 159 + + +P Sbjct: 133 LGRFVQVP 140 >gi|329939957|ref|ZP_08289239.1| glutamate uptake system protein [Streptomyces griseoaurantiacus M045] gi|329300783|gb|EGG44679.1| glutamate uptake system protein [Streptomyces griseoaurantiacus M045] Length = 228 Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 45/126 (35%), Positives = 75/126 (59%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + LS YTAAF+ E +RSG+ VP GQ EAA ALGL+ + R+++LPQA R+ I PL + Sbjct: 103 LGLSAYTAAFVCEALRSGINTVPMGQAEAARALGLSFTQVLRMIVLPQAFRAAIVPLANV 162 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 + L KN+++A A+G + + +I + I I+ ++ L++ + L + L Sbjct: 163 LIALTKNTTVAAAIGVGEAALLMKEMIENEAATVLIAFIFALGFVVLTLPMGLILGWLGK 222 Query: 391 KIALKE 396 ++A+K Sbjct: 223 RLAVKR 228 >gi|315641120|ref|ZP_07896199.1| glutamine ABC superfamily ATP binding cassette transporter, binding/permease protein [Enterococcus italicus DSM 15952] gi|315483128|gb|EFU73645.1| glutamine ABC superfamily ATP binding cassette transporter, binding/permease protein [Enterococcus italicus DSM 15952] Length = 722 Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 53/192 (27%), Positives = 98/192 (51%), Gaps = 29/192 (15%) Query: 190 FVFSFVLGIVLSLF------ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243 F + V+G++ L A R+ + + +P++ ++ F+ FGL I + Sbjct: 536 FALALVVGVIFGLMSVAPIKAVRIVASIYVDIIRGIPMMVLAFFIFFGLSGATGITI--- 592 Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 P+F + I L+ +A+IAEIVR G+ AVP GQMEA+ +L Sbjct: 593 --------------------PDFAAGIITLTLNASAYIAEIVRGGINAVPVGQMEASRSL 632 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363 GL++ + + ++LPQA++ +IP +Q++ LK++++ +G +L+ G I+ T Q+ Sbjct: 633 GLSYGRTMQKIILPQAIKIMIPSFVNQFVISLKDTTIISVIGVVELLQTGKIIVASTLQS 692 Query: 364 IEIILIWMFIYL 375 + I +YL Sbjct: 693 TYVYFIIAVMYL 704 >gi|227529156|ref|ZP_03959205.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus vaginalis ATCC 49540] gi|227351000|gb|EEJ41291.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus vaginalis ATCC 49540] Length = 501 Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 61/193 (31%), Positives = 104/193 (53%), Gaps = 22/193 (11%) Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251 F F+LG + +L RLS++ K + + YI + G P +V I Y Sbjct: 315 FGFILGTLFALM--RLSKN---KLLHTIAVCYIE--FLRGTPMMVQIMFVY--------- 358 Query: 252 GQFNFIGGSTVS--PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309 F G+ + P ++ IA+S + A++AEI+RSG+ ++P GQ EAA +LG+ K Sbjct: 359 ----FGIGAIIQSLPALLAGIIAVSLNSGAYVAEIIRSGIQSIPLGQTEAARSLGMDKNK 414 Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369 A R V++PQA+++I P L ++ + LLK+SSL +G +L+ + + T + + + I Sbjct: 415 AFRYVIMPQALKNIWPALGNELITLLKDSSLVSVIGVTELMFQTQLVQSATYKGVLPLFI 474 Query: 370 WMFIYLSLSIMIA 382 M IY L+ ++ Sbjct: 475 TMMIYFILTFTLS 487 Score = 37.4 bits (85), Expect = 4.4, Method: Compositional matrix adjust. Identities = 19/41 (46%), Positives = 24/41 (58%) Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 I+GTL RLS NKL+ I Y+E R P +V I F+Y Sbjct: 318 ILGTLFALMRLSKNKLLHTIAVCYIEFLRGTPMMVQIMFVY 358 >gi|254421401|ref|ZP_05035119.1| ABC transporter, permease protein, putative [Synechococcus sp. PCC 7335] gi|196188890|gb|EDX83854.1| ABC transporter, permease protein, putative [Synechococcus sp. PCC 7335] Length = 216 Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 51/139 (36%), Positives = 80/139 (57%), Gaps = 1/139 (0%) Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316 + G +SP ++ IAL+ YT+AF+ +I R + AVPRGQ +AA A+G + RL++L Sbjct: 79 VTGINLSP-LVAAAIALTAYTSAFLGDIWRGSIQAVPRGQWQAASAIGFGYFDQLRLIIL 137 Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376 PQA+R I P + ++K +SLA +GF +L I N T Q++ I + IY + Sbjct: 138 PQAVRLAIAPTVGFLVQVIKGTSLASIIGFTELSRAASLINNVTLQSLLIFGLAGLIYFA 197 Query: 377 LSIMIALFMNRLNAKIALK 395 L ++ + RL K+A K Sbjct: 198 LCYPLSTWSQRLEKKLAYK 216 >gi|330957236|gb|EGH57496.1| amino acid ABC transporter permease [Pseudomonas syringae pv. maculicola str. ES4326] Length = 229 Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 66/191 (34%), Positives = 102/191 (53%), Gaps = 17/191 (8%) Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239 TLT++ A + +L I + + R SRH+ + ALP YI F G P LV + Sbjct: 18 TLTLELVAIAVIAGLILAIPMGI--ARASRHWPVR---ALPYAYI--FFFRGTPLLVQLF 70 Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295 L Y L QF+ + + P F I ++ +TAA+IAEI+R + AVP G Sbjct: 71 LVYY------GLAQFDAVRQGPLWPYLRDPFWCAVITMTLHTAAYIAEILRGAIQAVPVG 124 Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355 ++EAA ALG++ KA ++LP+A R +P +++ + +LK S+LA V +L + T Sbjct: 125 EVEAARALGMSKWKALFYIVLPRAARIGLPAYSNEVILMLKASALASTVTLLELTGMART 184 Query: 356 IINQTGQAIEI 366 II +T +EI Sbjct: 185 IIARTYLPVEI 195 >gi|330812667|ref|YP_004357129.1| putative ABC transporter, permease component [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327380775|gb|AEA72125.1| putative ABC transporter, permease component [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 260 Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 46/119 (38%), Positives = 75/119 (63%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IALS A+++EI R+G++ VP GQ EA++ALGL+ V LPQAMR+IIPP T+Q Sbjct: 131 IALSLNYGAYLSEIFRAGILGVPNGQREASLALGLSETVIFWRVTLPQAMRTIIPPTTNQ 190 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 ++++LK+SSL +G +++ + + + + IE++ IY +SI + L R+ Sbjct: 191 FISMLKDSSLISVMGVWEVMFLAQSYGRSSYRYIEMLTTAAIIYWLMSIALELIQARME 249 >gi|317053655|ref|YP_004118789.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea sp. At-9b] gi|316952760|gb|ADU72233.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea sp. At-9b] Length = 218 Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 69/223 (30%), Positives = 113/223 (50%), Gaps = 18/223 (8%) Query: 174 RGLSFPTLTMDTNAKIFVF-----SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL 228 RG+S + M +A + +F G V+ L ++R H++ +A+ Y+ L Sbjct: 2 RGISIHDIWMIISALRWTLLLALCTFACGAVIGLLVA-VARTSHQRGLQAVAWFYVE--L 58 Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288 + G+P L ++ L + PV F+G S F + +A S AF+ EI R Sbjct: 59 VQGIPLLGMLFLLFF---GMPV-----FLGIDVSS--FTAALVAFSLSAGAFLGEIWRGS 108 Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348 ++AVP+GQ EA+++LG++ + R V+LPQA+R +PP + L+KN+SLA VGF + Sbjct: 109 IMAVPKGQWEASLSLGISRLQMLRTVILPQALRLSLPPTVGFSVQLIKNTSLAALVGFVE 168 Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 L G + T Q + I L+ Y +L +A L A+ Sbjct: 169 LTRSGQIVSGSTLQPLLIYLLVALCYFALCFPLARLSLHLEAR 211 >gi|326796876|ref|YP_004314696.1| polar amino acid ABC transporter inner membrane subunit [Marinomonas mediterranea MMB-1] gi|326547640|gb|ADZ92860.1| polar amino acid ABC transporter, inner membrane subunit [Marinomonas mediterranea MMB-1] Length = 270 Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 43/103 (41%), Positives = 66/103 (64%) Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 ALS +AFIAE+ R+G+ V +GQ+EAA ALGL+ + RL++LPQAMR I+PPL + + Sbjct: 143 ALSISYSAFIAEVFRAGIQEVSKGQIEAAQALGLSGWQRFRLIILPQAMRKILPPLGNDF 202 Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374 + ++K+S+L +G D+ +G T Q E + F+Y Sbjct: 203 VAMIKDSALVSVLGVQDITQLGKVYSASTFQFFETYNVVAFMY 245 Score = 37.4 bits (85), Expect = 4.0, Method: Compositional matrix adjust. Identities = 20/71 (28%), Positives = 38/71 (53%), Gaps = 3/71 (4%) Query: 81 SDSSY---ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137 +D SY A + G + T + F+ A+I G + S +++V + R Y+E+ R Sbjct: 31 ADESYQKIANTLSQGLLTTVGVTFAAFSIASIAGLFIALAGFSRHRIVREMSRFYIEIIR 90 Query: 138 NIPPLVVIFFL 148 +P LV++F++ Sbjct: 91 GVPVLVLLFYI 101 >gi|308172211|ref|YP_003918916.1| cystine ABC transporter permease [Bacillus amyloliquefaciens DSM 7] gi|307605075|emb|CBI41446.1| cystine ABC transporter (permease), membrane protein [Bacillus amyloliquefaciens DSM 7] gi|328552021|gb|AEB22513.1| cystine ABC transporter (permease), membrane protein [Bacillus amyloliquefaciens TA208] Length = 234 Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 68/209 (32%), Positives = 113/209 (54%), Gaps = 21/209 (10%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 + SF+ G++++L T L+R + K + + +Y+S + G P LV + + + L Sbjct: 40 ILSFIFGMIIALI-TALARMSNMKPLRWVFSVYVSA--VRGTPLLVQLFIIFYL------ 90 Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 FN T+ P F S IA S A+ +EI+R+ + +VP+GQ EA +G+T+RK Sbjct: 91 FPTFNI----TLDP-FPSAVIAFSLNVGAYASEIIRASISSVPKGQWEAGYTIGMTYRKT 145 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI- 369 V+LPQA R IPPL++ +++L+K++SLA + A+L I Q I +I I Sbjct: 146 LFRVILPQAFRVSIPPLSNTFISLIKDTSLASQILVAELFRKAQEIGAQNLDQILVIYIE 205 Query: 370 -----WMFIYLSLSIMIALFMNRLNAKIA 393 W+ +L LSI+ + RL+ +A Sbjct: 206 AAFIYWIICFL-LSIVQLVIERRLDRYVA 233 >gi|281415788|ref|ZP_06247530.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Micrococcus luteus NCTC 2665] Length = 300 Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 49/164 (29%), Positives = 96/164 (58%), Gaps = 5/164 (3%) Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291 +P LV++ YQL G G + ++ AL+ Y + IAE+VRSG+ + Sbjct: 121 VPVLVMMVFFYQLFAQVARSGAIQPQDG-----PYYAVIAALTLYNGSVIAELVRSGVRS 175 Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 +PRGQ EAA A+G+T ++ RLV +PQA+ +++P L SQ++ +LK+S+L +GF +L+ Sbjct: 176 LPRGQREAAAAVGMTSTQSLRLVEVPQALIAMLPSLLSQFVVILKDSALGYLIGFFELLH 235 Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395 + + G ++ +++ I++ ++ ++ RL+ +++ + Sbjct: 236 YARQLGSGNGNILQSLVVAAMIFIVINFLLTWAATRLSRRLSSR 279 >gi|226311780|ref|YP_002771674.1| amino acid ABC transporter permease protein [Brevibacillus brevis NBRC 100599] gi|226094728|dbj|BAH43170.1| amino acid ABC transporter permease protein [Brevibacillus brevis NBRC 100599] Length = 221 Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 44/132 (33%), Positives = 78/132 (59%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 +F S +AL+ ++ A+IAEI R + ++ +GQMEA ++LG++ R+ R ++LPQAM+ I Sbjct: 89 QFWSAALALAIHSGAYIAEIFRGSIQSIDKGQMEAGLSLGMSARQTMRRIILPQAMKRSI 148 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 PPL +Q++ LK SSLA + +L S+ + +T + LI YL + + Sbjct: 149 PPLGNQFILSLKESSLAAFIAMDELFSLARRLSAETFDEMTYFLIVALYYLVIVMAFTFV 208 Query: 385 MNRLNAKIALKE 396 ++ + ++A E Sbjct: 209 VHIMEKRLAKGE 220 >gi|154684846|ref|YP_001420007.1| YckJ [Bacillus amyloliquefaciens FZB42] gi|154350697|gb|ABS72776.1| YckJ [Bacillus amyloliquefaciens FZB42] Length = 229 Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 68/209 (32%), Positives = 113/209 (54%), Gaps = 21/209 (10%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 + SF+ G++++L T L+R + K + + +Y+S + G P LV + + + L Sbjct: 35 ILSFIFGMIIALI-TALARMSNMKPLRWVFSVYVSA--VRGTPLLVQLFIIFYL------ 85 Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 FN T+ P F S IA S A+ +EI+R+ + +VP+GQ EA +G+T+RK Sbjct: 86 FPTFNI----TLDP-FPSAVIAFSLNVGAYASEIIRASISSVPKGQWEAGYTIGMTYRKT 140 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI- 369 V+LPQA R IPPL++ +++L+K++SLA + A+L I Q I +I I Sbjct: 141 LFRVILPQAFRVSIPPLSNTFISLIKDTSLASQILVAELFRKAQEIGAQNLDQILVIYIE 200 Query: 370 -----WMFIYLSLSIMIALFMNRLNAKIA 393 W+ +L LSI+ + RL+ +A Sbjct: 201 AAFIYWIICFL-LSIVQHVIERRLDRYVA 228 >gi|330809176|ref|YP_004353638.1| putative amino acid ABC transporter, permease component [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327377284|gb|AEA68634.1| putative amino acid ABC transporter, permease component [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 258 Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 57/184 (30%), Positives = 96/184 (52%), Gaps = 7/184 (3%) Query: 220 PLLYIST----FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG--GSTVSPEFMSLYIAL 273 PLL++ +L+ G P LV I Y + +F IG G + + IAL Sbjct: 53 PLLHLPVRFYVWLMRGTPLLVQIVFLYTALAAGGIF-RFEDIGLFGLVIPGNIQAAIIAL 111 Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333 A++AEI+R+G+ AV +GQ EA +LG+T K R ++LPQA R I+PPL +++ Sbjct: 112 GLNEGAYMAEIIRAGIGAVDKGQYEAGRSLGMTFAKLMRRIVLPQAFRVIVPPLGNEFNV 171 Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393 +LKN++L +G +L+ + + T + E+ L+ +L L+ + F L A+ Sbjct: 172 MLKNTTLVSVIGVQELLLSTQMVTSATFRVFELYLVVAIYFLLLTTLWGFFQRWLEARFG 231 Query: 394 LKEK 397 ++ Sbjct: 232 QSDR 235 >gi|315283361|ref|ZP_07871572.1| His/Glu/Gln/Arg/opine ABC transporter permease [Listeria marthii FSL S4-120] gi|313613009|gb|EFR86940.1| His/Glu/Gln/Arg/opine ABC transporter permease [Listeria marthii FSL S4-120] Length = 486 Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 38/91 (41%), Positives = 67/91 (73%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+S IALS +AA++AEI+R+G+ AV +GQMEAA +LG+T + R ++LPQA+++I+P Sbjct: 356 FVSGCIALSLNSAAYVAEIIRAGISAVNKGQMEAARSLGMTQSASMRYIILPQAVKNILP 415 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356 L ++++ ++K SS+ +G +L+ + G + Sbjct: 416 ALGNEFVTVIKESSIVSVIGVTELMFMTGVV 446 >gi|300718315|ref|YP_003743118.1| polar amino acid ABC transporter, permease protein [Erwinia billingiae Eb661] gi|299064151|emb|CAX61271.1| polar amino acid ABC transporter, permease protein [Erwinia billingiae Eb661] Length = 249 Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 53/173 (30%), Positives = 93/173 (53%), Gaps = 11/173 (6%) Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286 +++ G+P L+++ Y F P+L N G F ++ L Y +A+IAEIVR Sbjct: 69 YVLRGIPLLMVVFWTY---FCVPLLIGHNISG-------FATMLCTLVIYESAYIAEIVR 118 Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346 G+ A+P GQ EA+ ALG+++ K R+V+LPQA+ + +P L SQ ++++K+S+L + Sbjct: 119 GGIQALPGGQYEASRALGMSYLKTLRVVILPQALYNALPSLVSQLVSIIKDSTLGYVINV 178 Query: 347 ADLVSVGGTIINQ-TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 +L + NQ + ++ I Y + + N+L +IA K + Sbjct: 179 PELTYAANQVNNQLLTKPFQVFAIVAISYYLICFSLTWLANKLEERIARKRRN 231 >gi|323465692|gb|ADX69379.1| Glutamine ABC superfamily ATP binding cassette transporter, permease protein [Lactobacillus helveticus H10] Length = 494 Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 65/202 (32%), Positives = 107/202 (52%), Gaps = 22/202 (10%) Query: 189 IFVFSFVLGIVLSLFAT--RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246 I VFS ++GIVL + RLS++ K + + YI I G P +V I Y Sbjct: 301 ITVFSVLIGIVLGMLLALMRLSKN---KLLHWIAVCYIE--FIRGTPQMVQILFVY---- 351 Query: 247 DKPVLGQFNFIGGSTVS--PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304 F G+ +S ++ IA+ + A++AE +RSG+ +V +GQ EAA +LG Sbjct: 352 ---------FGVGALISNLSALVAGIIAIGLNSGAYVAEDIRSGIASVAKGQTEAARSLG 402 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364 L+ KA R V++PQA+++I P L ++++ LLK+SSL +G +L+ I T + + Sbjct: 403 LSQAKAYRYVIIPQALKNIWPALGNEFITLLKDSSLVSVIGVTELMYQTELIQTSTYRGV 462 Query: 365 EIILIWMFIYLSLSIMIALFMN 386 + I M IY ++ + +N Sbjct: 463 LPLFIAMIIYFIMTFTLTRLLN 484 Score = 43.1 bits (100), Expect = 0.069, Method: Compositional matrix adjust. Identities = 30/106 (28%), Positives = 50/106 (47%), Gaps = 3/106 (2%) Query: 44 CVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSG 103 VN + +EK +L + +L E A + + + + YA + G T + Sbjct: 249 AVNKTISRVEKEDL-INKKYLPEAAKYM--KTAQKTNTMAKYAPYFVKGIEYTIIITVFS 305 Query: 104 MIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 ++ ++G L+ RLS NKL+ WI Y+E R P +V I F+Y Sbjct: 306 VLIGIVLGMLLALMRLSKNKLLHWIAVCYIEFIRGTPQMVQILFVY 351 >gi|239627922|ref|ZP_04670953.1| polar amino acid ABC transporter [Clostridiales bacterium 1_7_47_FAA] gi|239518068|gb|EEQ57934.1| polar amino acid ABC transporter [Clostridiales bacterium 1_7_47FAA] Length = 230 Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 63/229 (27%), Positives = 119/229 (51%), Gaps = 24/229 (10%) Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGK-----ALPLLYI 224 F++ + T + T I +F+ ++GIVL F + R +EKT K A+ +Y+ Sbjct: 13 FVSENRWKYLTDGLKTTLIITLFACLMGIVLG-FIVGMIRSTYEKTHKLKLLNAICKVYL 71 Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284 + +I G P +V + + Y + F GS + + +A + A++AEI Sbjct: 72 T--VIRGTPVIVQLLIIYFVLF------------GSVRIDKVLVAILAFGINSGAYVAEI 117 Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344 RSG++++ GQMEA +LG + + +++PQA ++++P L +++++LLK +S+A + Sbjct: 118 FRSGIMSIDAGQMEAGRSLGFNYAQTMWYIIMPQAFKTVLPTLCNEFISLLKETSVAGYI 177 Query: 345 GFADLVSVGGTIINQTGQA----IEIILIWMFIYLSLSIMIALFMNRLN 389 DL G I ++T A I + LI++ I + + +I + RL Sbjct: 178 AIQDLTKGGDIIRSRTYSAFMPLIAVALIYLIIVMIFTKLIQILERRLR 226 >gi|323697767|ref|ZP_08109679.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio sp. ND132] gi|323457699|gb|EGB13564.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio desulfuricans ND132] Length = 271 Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 48/129 (37%), Positives = 76/129 (58%), Gaps = 4/129 (3%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F S IALS + A+ +EI R+G+ ++ +GQ EAA +LG+ R ++LPQA+R ++P Sbjct: 140 FRSAVIALSLFEGAYASEIFRAGITSIDKGQWEAAKSLGMGPYAMYRHIILPQAVRRVLP 199 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL----IWMFIYLSLSIMI 381 PLTSQ ++L+K+S+L + DL G I +T EI I++ + L+LS ++ Sbjct: 200 PLTSQAVSLVKDSALVSTIAILDLTQRGRMIDAETFLTFEIWFTVAAIYLAVTLALSGVV 259 Query: 382 ALFMNRLNA 390 L R N Sbjct: 260 RLLERRFNG 268 Score = 37.4 bits (85), Expect = 4.3, Method: Compositional matrix adjust. Identities = 32/112 (28%), Positives = 51/112 (45%), Gaps = 6/112 (5%) Query: 65 SERAGFEIDQGIVPY----TSDSSYATAILV-GFVNTFWLAFSGMIPATIIGTLVGAGRL 119 S+R G+ +P +D + L+ G TF + M+ +IG R+ Sbjct: 39 SQRLGYNWQWYRIPQYLWTVTDQGFTWGPLMEGLGVTFRITGVSMVLMLVIGLTTALMRM 98 Query: 120 SANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPD-HSIVLPFGMF 170 SA+ + R Y+E+ RN P L+ IFF+Y V +L I S V+ +F Sbjct: 99 SASWAARGVARAYMELIRNTPLLIQIFFIYFVVAPILDISAFRSAVIALSLF 150 >gi|326693347|ref|ZP_08230352.1| amino acid ABC transporter periplasmic protein [Leuconostoc argentinum KCTC 3773] Length = 482 Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 52/176 (29%), Positives = 89/176 (50%), Gaps = 23/176 (13%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 + LPL+ ++ F+ GLP ++ + + V+ ++L + Y Sbjct: 328 RGLPLMVLAFFIYIGLPGVIGMKI-------------------PAVTAGILTLVLNEGAY 368 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 T AF VR G AV RGQMEAA +LGL + +A R V++PQ +R +IP +Q++ LK Sbjct: 369 TGAF----VRGGFEAVDRGQMEAARSLGLPYSRAMRRVIMPQGIRIMIPSFINQFIITLK 424 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 ++S+ A+G +L G I+++ Q + I IYL + ++ N + +I Sbjct: 425 DTSILSAIGILELTQTGSLIVSRNSQGFRVWAIVAVIYLIVITLLTWLSNWVEKRI 480 >gi|315304435|ref|ZP_07874723.1| His/Glu/Gln/Arg/opine ABC transporter permease [Listeria ivanovii FSL F6-596] gi|313627196|gb|EFR96041.1| His/Glu/Gln/Arg/opine ABC transporter permease [Listeria ivanovii FSL F6-596] Length = 486 Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 38/91 (41%), Positives = 67/91 (73%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+S IALS +AA++AEI+R+G+ AV +GQMEAA +LG+T + R ++LPQA+++I+P Sbjct: 356 FVSGCIALSLNSAAYVAEIIRAGISAVNKGQMEAARSLGMTQSASMRYIILPQAVKNILP 415 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356 L ++++ ++K SS+ +G +L+ + G + Sbjct: 416 ALGNEFVTVIKESSIVSVIGVTELMFMTGVV 446 >gi|167033586|ref|YP_001668817.1| polar amino acid ABC transporter inner membrane subunit [Pseudomonas putida GB-1] gi|166860074|gb|ABY98481.1| polar amino acid ABC transporter, inner membrane subunit [Pseudomonas putida GB-1] Length = 321 Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 65/209 (31%), Positives = 111/209 (53%), Gaps = 18/209 (8%) Query: 185 TNAKIFVFSFVLGIVLSLFAT--RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY 242 T + S + VL+L RLS + G A+ + T G+P L+ I Y Sbjct: 123 TTVYVSTLSIAIAFVLALLGATARLSSN-----GFAIAIASFYTSFFRGVPLLIQI---Y 174 Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302 ++ P LG ++ G+ + +ALS A++ EI R+G+ ++PRGQ EA+ A Sbjct: 175 LIYLGIPQLG---YVVGAVPAG-----ILALSLCYGAYMTEIFRAGISSIPRGQWEASRA 226 Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362 +GLT +A V+LPQ+MR IIPP +Q++++LK+SSL +G +L+ + T + Sbjct: 227 IGLTPFQAMTRVILPQSMRLIIPPTGNQFISMLKDSSLVSVIGVWELMFLARTQGRAEFR 286 Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAK 391 +E+++ +Y LSI++ +RL + Sbjct: 287 HLEMLITAAVLYWVLSILLEAVQSRLEKR 315 Score = 36.2 bits (82), Expect = 9.5, Method: Compositional matrix adjust. Identities = 28/111 (25%), Positives = 44/111 (39%), Gaps = 17/111 (15%) Query: 39 VIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFW 98 VI +WC + + L F++ + GF I QG+ S+ + AI Sbjct: 84 VITVWCELLLLFLLFFDTFDLSYSFIATKVGFMITQGVFTTVYVSTLSIAI--------- 134 Query: 99 LAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 A ++ L RLS+N I Y FR +P L+ I+ +Y Sbjct: 135 --------AFVLALLGATARLSSNGFAIAIASFYTSFFRGVPLLIQIYLIY 177 >gi|291326464|ref|ZP_06124625.2| glutamate/aspartate ABC transporter, permease protein [Providencia rettgeri DSM 1131] gi|291314318|gb|EFE54771.1| glutamate/aspartate ABC transporter, permease protein [Providencia rettgeri DSM 1131] Length = 226 Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 69/212 (32%), Positives = 115/212 (54%), Gaps = 18/212 (8%) Query: 186 NAKIFVFSFVLGIVLS--LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243 AKI + + V+GI+ L RLS K LY++TF +P LV++ L + Sbjct: 24 TAKITLTAIVVGILWGTVLAVMRLSTF---KPISWFAALYVNTFR--SIP-LVMVLLWFY 77 Query: 244 LHFDKPVLGQFNFIGGSTVSPE----FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299 L P L Q N +G +SP+ +S IA S + AA+ +EI+R+G+ ++ RGQ A Sbjct: 78 LIV--PSLLQ-NVLG---LSPKNDIRLISAMIAFSLFEAAYYSEIIRAGIQSISRGQASA 131 Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359 A+ALG+T+ + RLV+LPQA ++++P L +Q + L ++SSL + D I + Sbjct: 132 ALALGMTNMQTMRLVVLPQAFKAMVPLLLTQGIVLFQDSSLVYVLSLTDFFRTATNIGER 191 Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 G +E++L +Y +S ++ +N L + Sbjct: 192 DGTQVEMVLFAGLVYFIVSFGASMLVNYLKKR 223 Score = 39.7 bits (91), Expect = 0.75, Method: Compositional matrix adjust. Identities = 21/65 (32%), Positives = 38/65 (58%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151 GF+ T + + ++ + GT++ RLS K ++W +YV FR+IP ++V+ + Y Sbjct: 20 GFIVTAKITLTAIVVGILWGTVLAVMRLSTFKPISWFAALYVNTFRSIPLVMVLLWFYLI 79 Query: 152 VLSVL 156 V S+L Sbjct: 80 VPSLL 84 >gi|226331011|ref|ZP_03806529.1| hypothetical protein PROPEN_04941 [Proteus penneri ATCC 35198] gi|225201806|gb|EEG84160.1| hypothetical protein PROPEN_04941 [Proteus penneri ATCC 35198] Length = 121 Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 43/114 (37%), Positives = 71/114 (62%) Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340 + E VR+ + ++PRGQ A +ALGLT + R VLLP A R IIPP+TS+ LNL+KNS++ Sbjct: 1 MCEQVRAAINSLPRGQKAAGLALGLTLPQTYRYVLLPNAYRVIIPPMTSEMLNLVKNSAI 60 Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394 A +G D+ + +++ + +A E Y+ ++++I L M+ L ++ L Sbjct: 61 ASTIGLIDMAAQANKLLDYSAKAYESFTAITLAYVFINVIIMLLMSWLEKRVRL 114 >gi|167039130|ref|YP_001662115.1| polar amino acid ABC transporter, inner membrane subunit [Thermoanaerobacter sp. X514] gi|300913280|ref|ZP_07130597.1| polar amino acid ABC transporter, inner membrane subunit [Thermoanaerobacter sp. X561] gi|307723706|ref|YP_003903457.1| polar amino acid ABC transporter inner membrane subunit [Thermoanaerobacter sp. X513] gi|166853370|gb|ABY91779.1| polar amino acid ABC transporter, inner membrane subunit [Thermoanaerobacter sp. X514] gi|300889965|gb|EFK85110.1| polar amino acid ABC transporter, inner membrane subunit [Thermoanaerobacter sp. X561] gi|307580767|gb|ADN54166.1| polar amino acid ABC transporter, inner membrane subunit [Thermoanaerobacter sp. X513] Length = 220 Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 39/86 (45%), Positives = 63/86 (73%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P F + AL+ +AA++AEI+R+G+ AV GQ EAA +LG+TH A R V++PQA+++I Sbjct: 86 PAFTAGVFALAINSAAYVAEIIRAGIQAVDPGQNEAARSLGMTHAMAMRYVIIPQAIKNI 145 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADL 349 +P L ++++ +LK S++ +GFADL Sbjct: 146 LPALGNEFIVMLKESAIISVIGFADL 171 >gi|330429987|gb|AEC21321.1| glutamate/aspartate transport system permease protein [Pusillimonas sp. T7-7] Length = 251 Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 48/129 (37%), Positives = 77/129 (59%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+ + L YT++ +AE VR+G+ ++P GQ AA ALGL + R VLLP + R I+P Sbjct: 109 FIPAVLCLGFYTSSRVAEQVRAGIESLPAGQRMAATALGLESAQVYRYVLLPSSFRIILP 168 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PLTS+ LNL+KN+S+A +G +LV ++ + Q E + YL L++++ M Sbjct: 169 PLTSELLNLIKNTSVAFTIGLFELVGAARSMQEFSFQVFETFALATLFYLILNLVVVRSM 228 Query: 386 NRLNAKIAL 394 L ++A+ Sbjct: 229 LLLERRLAV 237 Score = 36.6 bits (83), Expect = 8.1, Method: Compositional matrix adjust. Identities = 28/92 (30%), Positives = 46/92 (50%), Gaps = 4/92 (4%) Query: 84 SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143 +Y +L G T A + A +GTLVG R ++ + +YVE+ RN+P LV Sbjct: 19 TYLQTLLEGLAWTIGTATLSWLLALSMGTLVGVARTTSMPWARRLGTMYVELLRNVPLLV 78 Query: 144 VIFFLYKSVLSVLP--IPD--HSIVLPFGMFL 171 +F Y + ++P + D I P+G+F+ Sbjct: 79 QMFLWYFVMPELVPRSLGDAIKQIAPPWGIFI 110 >gi|209965982|ref|YP_002298897.1| amino acid ABC transporter, permease protein [Rhodospirillum centenum SW] gi|209959448|gb|ACJ00085.1| amino acid ABC transporter, permease protein [Rhodospirillum centenum SW] Length = 226 Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 72/231 (31%), Positives = 114/231 (49%), Gaps = 23/231 (9%) Query: 177 SFPTLTMDT--NAKIFVFSFVLGIVLS--LFATRLS--RHFHEKTGKALPLLYISTFLIF 230 S P L T ++ S VLG+VL+ + RLS R G TFL Sbjct: 9 SLPQLLSGTVVTVELVALSLVLGLVLAVGIAVLRLSGIRAVSMLAGG-------YTFLFR 61 Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY----IALSCYTAAFIAEIVR 286 P LV I L Y LGQF + S + P Y +AL+ TAA+ EI+R Sbjct: 62 STPLLVQIFLIYY------GLGQFETVRESILWPFLREPYWCAILALTLNTAAYTGEIIR 115 Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346 G+ AVP GQ+EAA A+G++ R R ++LPQA R +P ++ + +++ SSLA + Sbjct: 116 GGIRAVPFGQIEAARAVGMSGRLLFRRIVLPQAFRQALPAYGNEMIQMVQASSLASTITL 175 Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 +L I ++T Q +E+ +I +YL+++ + + A++A + + Sbjct: 176 MELTGAARAIASRTFQPVEVFVIAGALYLAMNYALTRIVRAAEARLAHERR 226 >gi|49484629|ref|YP_041853.1| transport system membrane protein [Staphylococcus aureus subsp. aureus MRSA252] gi|257423896|ref|ZP_05600325.1| transport system membrane protein [Staphylococcus aureus subsp. aureus 55/2053] gi|257426579|ref|ZP_05602981.1| transport system membrane protein [Staphylococcus aureus subsp. aureus 65-1322] gi|257429215|ref|ZP_05605602.1| transport system membrane protein [Staphylococcus aureus subsp. aureus 68-397] gi|257431861|ref|ZP_05608224.1| transport system membrane protein [Staphylococcus aureus subsp. aureus E1410] gi|257434821|ref|ZP_05610872.1| transport system membrane protein [Staphylococcus aureus subsp. aureus M876] gi|282906756|ref|ZP_06314604.1| polar amino acid transport system permease [Staphylococcus aureus subsp. aureus Btn1260] gi|282915273|ref|ZP_06323050.1| amino acid ABC transporter, permease protein [Staphylococcus aureus subsp. aureus M899] gi|282920997|ref|ZP_06328715.1| polar amino acid transport system permease [Staphylococcus aureus subsp. aureus C427] gi|282925903|ref|ZP_06333551.1| transport system membrane protein [Staphylococcus aureus subsp. aureus C101] gi|283959196|ref|ZP_06376637.1| amino acid ABC transporter, permease protein [Staphylococcus aureus subsp. aureus A017934/97] gi|293497669|ref|ZP_06665523.1| polar amino acid transport system permease [Staphylococcus aureus subsp. aureus 58-424] gi|293511249|ref|ZP_06669945.1| transport system membrane protein [Staphylococcus aureus subsp. aureus M809] gi|293549857|ref|ZP_06672529.1| amino acid ABC transporter, permease protein [Staphylococcus aureus subsp. aureus M1015] gi|295429000|ref|ZP_06821622.1| transport system membrane protein [Staphylococcus aureus subsp. aureus EMRSA16] gi|297589505|ref|ZP_06948146.1| ABC superfamily ATP binding cassette transporter, membrane protein [Staphylococcus aureus subsp. aureus MN8] gi|49242758|emb|CAG41483.1| transport system membrane protein [Staphylococcus aureus subsp. aureus MRSA252] gi|257272914|gb|EEV05016.1| transport system membrane protein [Staphylococcus aureus subsp. aureus 55/2053] gi|257276210|gb|EEV07661.1| transport system membrane protein [Staphylococcus aureus subsp. aureus 65-1322] gi|257279696|gb|EEV10283.1| transport system membrane protein [Staphylococcus aureus subsp. aureus 68-397] gi|257282740|gb|EEV12872.1| transport system membrane protein [Staphylococcus aureus subsp. aureus E1410] gi|257285417|gb|EEV15533.1| transport system membrane protein [Staphylococcus aureus subsp. aureus M876] gi|282312732|gb|EFB43136.1| transport system membrane protein [Staphylococcus aureus subsp. aureus C101] gi|282315412|gb|EFB45796.1| polar amino acid transport system permease [Staphylococcus aureus subsp. aureus C427] gi|282320994|gb|EFB51328.1| amino acid ABC transporter, permease protein [Staphylococcus aureus subsp. aureus M899] gi|282329655|gb|EFB59176.1| polar amino acid transport system permease [Staphylococcus aureus subsp. aureus Btn1260] gi|283471633|emb|CAQ50844.1| L-cystine transport system permease protein TcyB [Staphylococcus aureus subsp. aureus ST398] gi|283788788|gb|EFC27615.1| amino acid ABC transporter, permease protein [Staphylococcus aureus subsp. aureus A017934/97] gi|290918904|gb|EFD95980.1| amino acid ABC transporter, permease protein [Staphylococcus aureus subsp. aureus M1015] gi|291096600|gb|EFE26858.1| polar amino acid transport system permease [Staphylococcus aureus subsp. aureus 58-424] gi|291465875|gb|EFF08405.1| transport system membrane protein [Staphylococcus aureus subsp. aureus M809] gi|295126759|gb|EFG56403.1| transport system membrane protein [Staphylococcus aureus subsp. aureus EMRSA16] gi|297578016|gb|EFH96729.1| ABC superfamily ATP binding cassette transporter, membrane protein [Staphylococcus aureus subsp. aureus MN8] gi|312437165|gb|ADQ76236.1| ABC superfamily ATP binding cassette transporter, membrane protein [Staphylococcus aureus subsp. aureus TCH60] gi|315194906|gb|EFU25294.1| transport system membrane protein [Staphylococcus aureus subsp. aureus CGS00] Length = 239 Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 53/155 (34%), Positives = 98/155 (63%), Gaps = 10/155 (6%) Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248 I + +FVLG++++LF T L R K +++ +Y+S +I G P +V + + + + Sbjct: 34 ITLVTFVLGLIIALF-TALMRISTSKVLRSIARVYVS--IIRGTPMIVQL---FIIFYGI 87 Query: 249 PVLGQF---NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305 P LG+ + T++P ++ I LS A+ +EI+R G+I++P+GQ EAA ++G+ Sbjct: 88 PELGRLLTNDADNQWTLAPVVAAI-IGLSLNVGAYASEIIRGGIISIPKGQTEAAYSIGM 146 Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340 T+R+ + ++LPQA+R IP L + +L+L+K++SL Sbjct: 147 TYRQTIQRIILPQAIRVSIPALGNTFLSLIKDTSL 181 >gi|328910284|gb|AEB61880.1| cystine ABC transporter (permease), membrane protein [Bacillus amyloliquefaciens LL3] Length = 229 Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 68/209 (32%), Positives = 113/209 (54%), Gaps = 21/209 (10%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 + SF+ G++++L T L+R + K + + +Y+S + G P LV + + + L Sbjct: 35 ILSFIFGMIIALI-TALARMSNMKPLRWVFSVYVSA--VRGTPLLVQLFIIFYL------ 85 Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 FN T+ P F S IA S A+ +EI+R+ + +VP+GQ EA +G+T+RK Sbjct: 86 FPTFNI----TLDP-FPSAVIAFSLNVGAYASEIIRASISSVPKGQWEAGYTIGMTYRKT 140 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI- 369 V+LPQA R IPPL++ +++L+K++SLA + A+L I Q I +I I Sbjct: 141 LFRVILPQAFRVSIPPLSNTFISLIKDTSLASQILVAELFRKAQEIGAQNLDQILVIYIE 200 Query: 370 -----WMFIYLSLSIMIALFMNRLNAKIA 393 W+ +L LSI+ + RL+ +A Sbjct: 201 AAFIYWIICFL-LSIVQLVIERRLDRYVA 228 >gi|289435591|ref|YP_003465463.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|289171835|emb|CBH28381.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Listeria seeligeri serovar 1/2b str. SLCC3954] Length = 486 Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 38/91 (41%), Positives = 67/91 (73%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+S IALS +AA++AEI+R+G+ AV +GQMEAA +LG+T + R ++LPQA+++I+P Sbjct: 356 FVSGCIALSLNSAAYVAEIIRAGISAVNKGQMEAARSLGMTQSASMRYIILPQAVKNILP 415 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356 L ++++ ++K SS+ +G +L+ + G + Sbjct: 416 ALGNEFVTVIKESSIVSVIGVTELMFMTGVV 446 >gi|163789692|ref|ZP_02184129.1| glutamine ABC transporter, permease protein [Carnobacterium sp. AT7] gi|159874914|gb|EDP68981.1| glutamine ABC transporter, permease protein [Carnobacterium sp. AT7] Length = 216 Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 62/210 (29%), Positives = 101/210 (48%), Gaps = 31/210 (14%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPTLVLIALKYQL 244 VFSF++G +L L F + G + LPLL I F F LP + + Sbjct: 31 VFSFIIGAILGLLRYMKIPVFSKIIGAIVDLIRNLPLLLIIFFTYFALPQI-------GI 83 Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304 FD F S AL+ + +A ++EI+R+GL +VP GQMEA + G Sbjct: 84 RFDI-----------------FWSAVAALTIFESAMLSEIIRAGLNSVPSGQMEAGRSTG 126 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ-TGQA 363 L++ + +L+PQA ++++PP+ SQ ++L+K++SLA + +L I Q T Sbjct: 127 LSYLQTLWFILIPQAFKAMVPPIVSQLISLIKDTSLATIISLPELTHNARIIYGQNTTYV 186 Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIA 393 I + + F Y + ++ R K+A Sbjct: 187 IPMFIALAFFYFIICYALSKVAKRFETKLA 216 >gi|116249396|ref|YP_765237.1| putative ATP-binding component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] gi|115254046|emb|CAK12443.1| putative ATP-binding component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] Length = 511 Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 67/213 (31%), Positives = 110/213 (51%), Gaps = 24/213 (11%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 V ++G+ L++ SR LP I T + GLP +V I + Sbjct: 41 VLGVIIGMALAVMGISQSRWLR------LPA-RIYTDIFRGLPAIVTIL----------I 83 Query: 251 LGQ-FNFIGGSTVSPEFMSLYI-ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308 +GQ F IG P L I ALS A+I EI RSG+ +V RGQMEA AL ++H Sbjct: 84 IGQGFARIGREIFGPSPFPLGILALSLIAGAYIGEIFRSGIQSVERGQMEACRALSMSHG 143 Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF----ADLVSVGGTIINQTGQAI 364 + RL+++PQ +R ++P L +Q++ +K+SSL +G ++ VG TG Sbjct: 144 QGMRLIVIPQGIRRVLPALVNQFIGNVKDSSLVYFLGLLASEREIFRVGQDQAVVTGNLS 203 Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 ++L +F YL +++ + F+N ++A++ L ++ Sbjct: 204 PLLLAGVF-YLVITVPLTHFVNYIDARLRLGKQ 235 >gi|110800463|ref|YP_695035.1| His/Glu/Gln/Arg/opine ABC transporter permease [Clostridium perfringens ATCC 13124] gi|110675110|gb|ABG84097.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Clostridium perfringens ATCC 13124] Length = 223 Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 41/109 (37%), Positives = 76/109 (69%), Gaps = 1/109 (0%) Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327 S IA+S +AA+++EI+R+G+ AV +GQ+EAA +LG+ A RL++LPQA+++I+P + Sbjct: 96 SCIIAISLNSAAYVSEIIRAGIDAVDKGQLEAARSLGMAEGMAMRLIILPQAIKNILPAI 155 Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE-IILIWMFIYL 375 ++++ ++K SS+A +G A+L+ + T + E +I+I MF ++ Sbjct: 156 GNEFVAIIKESSMASTIGVAELMYSSKIVTGATYKGFEPLIVIAMFYFV 204 >gi|71735739|ref|YP_277029.1| amino acid ABC transporter permease [Pseudomonas syringae pv. phaseolicola 1448A] gi|257483717|ref|ZP_05637758.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tabaci ATCC 11528] gi|298489317|ref|ZP_07007332.1| Arginine transport system permease protein artM [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|71556292|gb|AAZ35503.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. phaseolicola 1448A] gi|298156168|gb|EFH97273.1| Arginine transport system permease protein artM [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|320331786|gb|EFW87724.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. glycinea str. race 4] gi|330872637|gb|EGH06786.1| amino acid ABC transporter permease [Pseudomonas syringae pv. glycinea str. race 4] gi|330987162|gb|EGH85265.1| amino acid ABC transporter permease [Pseudomonas syringae pv. lachrymans str. M301315] gi|331012130|gb|EGH92186.1| amino acid ABC transporter permease [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 229 Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 65/191 (34%), Positives = 102/191 (53%), Gaps = 17/191 (8%) Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239 TLT++ A + +L I + + R SRH+ + ALP YI F G P LV + Sbjct: 18 TLTLELVAIAVIAGLILAIPMGI--ARASRHWPVR---ALPYAYI--FFFRGTPLLVQLF 70 Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295 L Y L QF+ + + P F + ++ +TAA+IAEI+R + AVP G Sbjct: 71 LVYY------GLAQFDVVRQGPLWPYLRDPFWCAVVTMTLHTAAYIAEILRGAIQAVPVG 124 Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355 ++EAA ALG++ KA ++LP+A R +P +++ + +LK S+LA V +L + T Sbjct: 125 EVEAARALGMSKWKALFYIVLPRAARIGLPAYSNEVILMLKASALASTVTLLELTGMART 184 Query: 356 IINQTGQAIEI 366 II +T +EI Sbjct: 185 IIARTYLPVEI 195 >gi|307131246|ref|YP_003883262.1| ABC transporter permease [Dickeya dadantii 3937] gi|306528775|gb|ADM98705.1| ABC transporter permease protein [Dickeya dadantii 3937] Length = 234 Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 45/133 (33%), Positives = 82/133 (61%), Gaps = 1/133 (0%) Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320 T+SP F + ALS +AAF AE+ R G++++ GQ E A ALG++ A R V+LPQA+ Sbjct: 98 TLSP-FAAAVTALSAQSAAFYAEVYRGGILSIAEGQWEGAKALGMSRPLALRRVILPQAL 156 Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380 R +IPPL + L+K++SLA ++ + +L+ I +Q+ + +E+ + +Y +L + Sbjct: 157 RRMIPPLIERSFELIKSTSLASSLAYGELLYQAMQINSQSFRPLEVYSLAALLYFTLLFV 216 Query: 381 IALFMNRLNAKIA 393 ++L + +++ Sbjct: 217 LSLLSQYVERRLS 229 >gi|317053432|ref|YP_004119199.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea sp. At-9b] gi|316953171|gb|ADU72643.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea sp. At-9b] Length = 243 Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 47/130 (36%), Positives = 74/130 (56%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 +F + + L CY A +AE+VR+GL ++ +GQ A ALGLT + R VLLP A R + Sbjct: 107 QFYTAVLCLGCYHGARMAEVVRAGLESLSKGQRMAGQALGLTLPQTYRYVLLPVAYRIVT 166 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 P +TS++L+ KN+S+A+A+G +L + T Q E + +YL L++ I Sbjct: 167 PAITSEFLSCTKNTSVALAIGLIELTGSARAMQENTFQVFEAFSVATVLYLLLNMAIVFA 226 Query: 385 MNRLNAKIAL 394 M + + AL Sbjct: 227 MRGIEKRAAL 236 >gi|58336481|ref|YP_193066.1| glutamine ABC transporter permease protein [Lactobacillus acidophilus NCFM] gi|227903033|ref|ZP_04020838.1| glutamine ABC superfamily ATP binding cassette transporter permease protein [Lactobacillus acidophilus ATCC 4796] gi|58253798|gb|AAV42035.1| glutamine ABC transporter permease protein [Lactobacillus acidophilus NCFM] gi|227869207|gb|EEJ76628.1| glutamine ABC superfamily ATP binding cassette transporter permease protein [Lactobacillus acidophilus ATCC 4796] Length = 491 Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 63/202 (31%), Positives = 107/202 (52%), Gaps = 22/202 (10%) Query: 189 IFVFSFVLGIVLSLFAT--RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246 I +FS ++GI+L + RLS++ K + + YI I G P +V I Y Sbjct: 298 ITIFSVLIGIILGMLLALMRLSKN---KLLHGIAVCYIE--FIRGTPQMVQILFVY---- 348 Query: 247 DKPVLGQFNFIGGSTVS--PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304 F G+ +S ++ IA+ + A++AE +RSG+ +V +GQ EAA +LG Sbjct: 349 ---------FGVGTLISNLSALVAGIIAIGLNSGAYVAEDIRSGIASVAKGQTEAARSLG 399 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364 L+ KA R V++PQA+++I P L ++++ LLK+SSL +G +L+ I T + + Sbjct: 400 LSQAKAYRYVVIPQALKNIWPALGNEFITLLKDSSLVSVIGVTELMYQTELIQTSTYRGV 459 Query: 365 EIILIWMFIYLSLSIMIALFMN 386 + I M IY ++ + +N Sbjct: 460 LPLFIAMIIYFIMTFTLTRLLN 481 Score = 42.0 bits (97), Expect = 0.19, Method: Compositional matrix adjust. Identities = 32/109 (29%), Positives = 50/109 (45%), Gaps = 3/109 (2%) Query: 41 FLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLA 100 + VN N +EK NL + +L E A + + + + YA + G T + Sbjct: 243 LIRAVNKTINRVEKKNL-INKEYLPEAAKYM--KTAQKSNTMAKYAPYFVKGIGYTIVIT 299 Query: 101 FSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 ++ I+G L+ RLS NKL+ I Y+E R P +V I F+Y Sbjct: 300 IFSVLIGIILGMLLALMRLSKNKLLHGIAVCYIEFIRGTPQMVQILFVY 348 >gi|260665023|ref|ZP_05865873.1| ABC transporter permease component [Lactobacillus jensenii SJ-7A-US] gi|260561077|gb|EEX27051.1| ABC transporter permease component [Lactobacillus jensenii SJ-7A-US] Length = 534 Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 42/120 (35%), Positives = 77/120 (64%) Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 +S T A++AE++R G++A P+GQ EAA ALG+TH + ++LPQA+++ +P +T++++ Sbjct: 390 VSINTGAYLAEVIRGGIMATPKGQFEAASALGMTHNQRMWNIILPQAIKNCLPSITNEFI 449 Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 +K++S+ + ++L VG TI +Q+ Q + L+ IYL L+ I N + K+ Sbjct: 450 VNIKDTSVLSIISVSELFFVGSTIASQSFQFFQTYLMISAIYLVLTFSITRIFNLIEKKL 509 >gi|227524120|ref|ZP_03954169.1| ABC superfamily ATP binding cassette transporter, substrate binding and permease protein [Lactobacillus hilgardii ATCC 8290] gi|227088751|gb|EEI24063.1| ABC superfamily ATP binding cassette transporter, substrate binding and permease protein [Lactobacillus hilgardii ATCC 8290] Length = 488 Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 61/202 (30%), Positives = 106/202 (52%), Gaps = 21/202 (10%) Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251 F ++G+VL+L R SR ++ + L + Y T I G P +V + Y Sbjct: 303 FGVLIGVVLALM--RFSR---QRWLRGLAISY--TEFIRGTPLMVQVMFVY--------- 346 Query: 252 GQFNFIGGSTVS-PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 F G ++ P +S IA+S + A++AEI+R G+ +V +GQ EAA +LGLT Sbjct: 347 ----FGIGVIINIPALISGMIAVSLNSGAYVAEIIRGGINSVGKGQTEAAESLGLTKGDM 402 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370 R V+LPQA ++I P L +++++L+K SS+ +G DL+ + T + + I + Sbjct: 403 MRYVILPQAFKNIWPALGNEFISLIKESSIVSIIGVTDLIYQLNIVRADTYRGVMPIFVA 462 Query: 371 MFIYLSLSIMIALFMNRLNAKI 392 M +Y ++ ++ +N K+ Sbjct: 463 MVLYFLMTFLLTRLLNHYEGKM 484 >gi|220914445|ref|YP_002489754.1| polar amino acid ABC transporter inner membrane protein [Arthrobacter chlorophenolicus A6] gi|219861323|gb|ACL41665.1| polar amino acid ABC transporter, inner membrane subunit [Arthrobacter chlorophenolicus A6] Length = 365 Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 67/217 (30%), Positives = 121/217 (55%), Gaps = 25/217 (11%) Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL----YISTFLIFGLPTLVL 237 T+ A + FVLG +L+L RLS A PLL + +++ P LV Sbjct: 123 TLKLTAISGILGFVLGFILALM--RLS---------ASPLLVSVSWTFSWIFRSTPLLVQ 171 Query: 238 IALKYQLHF--DKPVLG------QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289 + L Y L + +K LG +F + +T+ +F + + L+ AA+ AEI+R G+ Sbjct: 172 LLLWYNLGYLYEKISLGIPFTDVRFFEVQTTTLISQFAAAVLGLTLNQAAYSAEIIRGGI 231 Query: 290 IAVPRGQMEAAIALGL-THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348 ++V +GQ+EAA ALG+ R++TR+VL PQAMR+I+P ++ + L+K +S+ + +++ Sbjct: 232 LSVDQGQLEAAAALGIPAWRRSTRIVL-PQAMRAILPTAFNEIIGLVKGTSIVYVLAYSE 290 Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 L I N+T Q + ++L+ Y+ ++ ++++F Sbjct: 291 LFYTVQVIYNRTQQVLPLLLVATLWYVVITSVLSVFQ 327 >gi|159026343|emb|CAO86432.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 241 Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 74/232 (31%), Positives = 115/232 (49%), Gaps = 25/232 (10%) Query: 168 GMFLNN---RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224 G+FL LS LT+ + SF LG++L+L R + L + YI Sbjct: 27 GLFLKAIPLDDLSGLILTLLVAIASMILSFPLGVLLAL-----GRQSELPAIRWLSIGYI 81 Query: 225 STFLIFGLPTL-VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIA-LSCYTAAFIA 282 L+ GLP L +L + L P + PE + IA + + AA++A Sbjct: 82 E--LLRGLPLLGILFMAQVMLPLILP----------AGTRPERVIRAIAGFTLFAAAYLA 129 Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342 E VR GL A+P+GQ+EAA ALGL L++LPQA++++IP + Q+++L K++SL Sbjct: 130 ENVRGGLQAIPKGQIEAARALGLKPIFVLLLIVLPQALKAVIPAIVGQFISLFKDTSLLA 189 Query: 343 AVGFADLVSVGGTIINQT---GQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 VG DL+ + G+++ G E+ L FIY ++L RL + Sbjct: 190 IVGLVDLLGMAGSVLANPKFIGDYPEVYLFLAFIYWIFCYSMSLASRRLEQR 241 >gi|145589171|ref|YP_001155768.1| polar amino acid ABC transporter, inner membrane subunit [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|145047577|gb|ABP34204.1| amino acid ABC transporter membrane protein 2, PAAT family [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 222 Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 46/128 (35%), Positives = 75/128 (58%) Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326 +S I + AF +EIVR+G+ +VPRGQ AA ALG+T+ + R V+LPQA R++IP Sbjct: 93 LSATITFIAFEGAFFSEIVRAGIQSVPRGQGYAAEALGMTYGQNMRFVVLPQAFRNMIPV 152 Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386 +Q + L +++SL A+G DL+ G+ IE ++ F Y + ++ + Sbjct: 153 FMTQTIILFQDTSLVYAIGAYDLLKGFEIAGKNYGRPIETYILAAFTYFIICFSLSKIVR 212 Query: 387 RLNAKIAL 394 R+ AK+A+ Sbjct: 213 RVQAKVAI 220 >gi|293554038|ref|ZP_06674638.1| ABC-type amino acid transport system, permease component [Enterococcus faecium E1039] gi|293569787|ref|ZP_06680874.1| ABC-type amino acid transport system, permease component [Enterococcus faecium E1071] gi|291587535|gb|EFF19412.1| ABC-type amino acid transport system, permease component [Enterococcus faecium E1071] gi|291601820|gb|EFF32072.1| ABC-type amino acid transport system, permease component [Enterococcus faecium E1039] Length = 218 Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 56/166 (33%), Positives = 91/166 (54%), Gaps = 14/166 (8%) Query: 228 LIFGLPTLVLIALKYQLHFDKPVLG-QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286 +I LP L++I Y F P +G Q N F S AL+ + +A ++EI R Sbjct: 61 IIRNLPLLLIIFFTY---FALPQIGIQMNI---------FWSAVAALTIFESAMLSEIFR 108 Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346 +GL AVP+GQMEA ++ GLT+ + R ++LPQA +S+IP + SQ ++L+K++SLAV + Sbjct: 109 AGLNAVPKGQMEAGLSTGLTYVETMRTIVLPQAFKSMIPAIVSQLISLIKDTSLAVIISL 168 Query: 347 ADLVSVGGTIINQ-TGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 +L I Q T + + +I +Y + ++L L + Sbjct: 169 PELSHQARIIYGQNTNYVLPMFIIMTLMYFVVCYALSLLSGYLEKR 214 >gi|269139979|ref|YP_003296680.1| glutamate-aspartate transport system permease [Edwardsiella tarda EIB202] gi|267985640|gb|ACY85469.1| glutamate-aspartate transport system permease [Edwardsiella tarda EIB202] gi|304559812|gb|ADM42476.1| Glutamate Aspartate transport system permease protein GltK [Edwardsiella tarda FL6-60] Length = 225 Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 72/210 (34%), Positives = 117/210 (55%), Gaps = 12/210 (5%) Query: 188 KIFVFSFVLGIVLS--LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH 245 KI + + V+GI+ L RLSR K L LY++ F +P LV++ L + L Sbjct: 25 KITLTAVVVGILWGTLLAVMRLSRW---KPLAWLAALYVNLFR--SVP-LVMVLLWFYLV 78 Query: 246 FDKPVLGQFNFIGGSTVSP-EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304 P L Q F+G S S +S +A + + AA+ +EI+R+G+ +V RGQ AA+ALG Sbjct: 79 V--PSLLQ-RFLGLSPQSDIRLISAMVAFALFEAAYYSEIIRAGIKSVARGQNAAALALG 135 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364 +T ++ LV+LPQA R+++P L +Q + L +++SL + AD TI + G + Sbjct: 136 MTPWQSLYLVVLPQAFRAMVPLLLTQGIVLFQDTSLVYVLSLADFFRTASTIGERDGTQL 195 Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIAL 394 E+IL +Y +S+ +L ++ L + AL Sbjct: 196 EMILFAGAVYFIISLSASLLVSHLKKRSAL 225 Score = 41.6 bits (96), Expect = 0.24, Method: Compositional matrix adjust. Identities = 23/68 (33%), Positives = 41/68 (60%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G V T + + ++ + GTL+ RLS K +AW+ +YV +FR++P ++V+ + Sbjct: 16 LLDGMVITLKITLTAVVVGILWGTLLAVMRLSRWKPLAWLAALYVNLFRSVPLVMVLLWF 75 Query: 149 YKSVLSVL 156 Y V S+L Sbjct: 76 YLVVPSLL 83 >gi|293367120|ref|ZP_06613791.1| L-cystine ABC superfamily ATP binding cassette transporter, membrane protein [Staphylococcus epidermidis M23864:W2(grey)] gi|291318681|gb|EFE59056.1| L-cystine ABC superfamily ATP binding cassette transporter, membrane protein [Staphylococcus epidermidis M23864:W2(grey)] Length = 239 Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 58/207 (28%), Positives = 118/207 (57%), Gaps = 10/207 (4%) Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248 I + +F+LG++++LF T L R K + + +Y+S +I G P +V + + + + Sbjct: 34 ITLVTFILGLIIALF-TALMRISTSKLLRGIARVYVS--IIRGTPMIVQL---FIIFYGI 87 Query: 249 PVLGQF---NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305 P LG+ N T++P ++ I LS A+ +EI+R G++++P+GQ EAA ++G+ Sbjct: 88 PELGRLVTNNADNQWTLAPVIAAI-IGLSLNVGAYASEIIRGGILSIPKGQTEAAYSIGM 146 Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365 +R+ + ++LPQA+R IP L + +L+L+K++SL + A++ + + T + + Sbjct: 147 NYRQTVQRIILPQAIRVSIPALGNTFLSLIKDTSLLGFILVAEMFRKAQEVASTTYEYLT 206 Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKI 392 I L+ +Y + +I++ ++I Sbjct: 207 IYLLVALMYWVVCFVISIIQGWYESRI 233 >gi|116492195|ref|YP_803930.1| ABC-type amino acid transport system, permease component [Pediococcus pentosaceus ATCC 25745] gi|116102345|gb|ABJ67488.1| amino acid ABC transporter membrane protein 2, PAAT family [Pediococcus pentosaceus ATCC 25745] Length = 218 Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 64/220 (29%), Positives = 109/220 (49%), Gaps = 31/220 (14%) Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPT 234 +T++ + + S++LG +L ++F G + LPL+ I F+ FGLP Sbjct: 22 ITVEVSVISIILSYILGGILGFIRYMRIKYFSAIVGFIIDLIRNLPLILIFFFVYFGLPN 81 Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294 L L + I S +AL+ + +A +AEI+R G+ ++ + Sbjct: 82 LGL---------------RIEIIPSSI---------LALTVFESAMLAEIIRGGIESISK 117 Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354 GQME A A GLT+ +A R ++LPQA +IP L SQ+++L+K++SLA + +L+ Sbjct: 118 GQMEGARANGLTYWQAMRYIILPQAQVRMIPALVSQFISLIKDTSLATIIMLPELMYHAQ 177 Query: 355 TIINQ-TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393 I Q T I + + +Y + ++LF L +IA Sbjct: 178 IIYGQNTNYIIPMFVALAVMYFIVCYALSLFSRYLEKRIA 217 >gi|163857805|ref|YP_001632103.1| amino acid ABC transporter, permease protein [Bordetella petrii DSM 12804] gi|163261533|emb|CAP43835.1| amino acid ABC transporter, permease protein [Bordetella petrii] Length = 229 Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 38/84 (45%), Positives = 62/84 (73%) Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329 +++LS YT++++AEIV + ++AVPRGQ+E A+ LGL +A RLV+LPQAMR I+ P++ Sbjct: 96 FVSLSVYTSSYVAEIVMNAILAVPRGQVEGALTLGLRPLQALRLVILPQAMRLIVQPMSG 155 Query: 330 QYLNLLKNSSLAVAVGFADLVSVG 353 Y+ L+K++++ VG +L G Sbjct: 156 VYVMLIKSTAIVSVVGITELTRQG 179 >gi|325000355|ref|ZP_08121467.1| amino acid ABC transporter membrane protein [Pseudonocardia sp. P1] Length = 301 Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 51/145 (35%), Positives = 85/145 (58%) Query: 237 LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296 L AL +L P +F + +T+ F + + L AA++AEIVRSG+ +V GQ Sbjct: 121 LSALYPRLSLGIPFGPEFVVVDTNTLISPFAAALLGLGLNEAAYMAEIVRSGIQSVDGGQ 180 Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356 EAA ALG+T + R V+LPQAMR I+PP ++ + +LK +SL V +G+ +L++ I Sbjct: 181 SEAAGALGMTRAQTLRRVVLPQAMRVIVPPTGNETIGMLKTTSLVVVIGYLELLTSVQRI 240 Query: 357 INQTGQAIEIILIWMFIYLSLSIMI 381 + + I ++++ YL L+ ++ Sbjct: 241 YSANFEVIPLLIVAAAWYLVLTSLL 265 >gi|296534282|ref|ZP_06896760.1| ABC superfamily ATP binding cassette transporter, membrane protein [Roseomonas cervicalis ATCC 49957] gi|296265398|gb|EFH11545.1| ABC superfamily ATP binding cassette transporter, membrane protein [Roseomonas cervicalis ATCC 49957] Length = 287 Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 49/171 (28%), Positives = 97/171 (56%), Gaps = 6/171 (3%) Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLG--QFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283 T+L G P ++ + L + + P LG F+ ++P +L + L A+ +E Sbjct: 112 TWLFRGTPVILQLLLWFNMALIFPRLGFGDFSVRTVDVMTPALAAL-LGLGINQGAYTSE 170 Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343 ++R+G+++V GQ EAA A+G+T +A R ++ PQAM+ +IPPL ++++ ++K +SLA Sbjct: 171 VIRAGMLSVDAGQYEAAKAIGMTRLRALRRIIFPQAMKVVIPPLGNEFIGMVKLTSLASV 230 Query: 344 VGFADLVSVGGTIINQTGQAIEIILI---WMFIYLSLSIMIALFMNRLNAK 391 + FA+++ I + IE++++ W I +S+ + + + R A+ Sbjct: 231 IQFAEILHAAQNIYYANSRVIELLIVAALWYLIIVSVLTPLQMLLERRFAR 281 Score = 36.6 bits (83), Expect = 8.0, Method: Compositional matrix adjust. Identities = 18/68 (26%), Positives = 32/68 (47%) Query: 86 ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145 A AI+ G NT W+ F+ M +G + R+S N ++ + Y +FR P ++ + Sbjct: 65 APAIMAGLYNTLWMTFAAMALGIALGVVTAVMRMSPNPVLQGVAMGYTWLFRGTPVILQL 124 Query: 146 FFLYKSVL 153 + L Sbjct: 125 LLWFNMAL 132 >gi|294101083|ref|YP_003552941.1| polar amino acid ABC transporter, inner membrane subunit [Aminobacterium colombiense DSM 12261] gi|293616063|gb|ADE56217.1| polar amino acid ABC transporter, inner membrane subunit [Aminobacterium colombiense DSM 12261] Length = 520 Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 56/135 (41%), Positives = 80/135 (59%), Gaps = 8/135 (5%) Query: 229 IFGLPTLVLIALKY-QLHFDKPVLGQ--FNFIG----GSTVSPEFMSLYIALSCYTAAFI 281 IFG L +A+ Y + PVL Q F F G G +SP F + + L AA+ Sbjct: 327 IFGPTLLSRLAIGYIEAIRGTPVLIQLFFIFYGLPNIGIKLSPFFAGI-LGLGLNYAAYE 385 Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341 AE R+GL++VPR QME A+ALG+T +A R V+LPQA+R +PP+T+ +++LLK+SSL Sbjct: 386 AENYRAGLLSVPRQQMEGALALGMTRWQALRHVVLPQALRVALPPVTNDFISLLKDSSLV 445 Query: 342 VAVGFADLVSVGGTI 356 + DL G + Sbjct: 446 SVITMVDLTKAYGQL 460 >gi|312115425|ref|YP_004013021.1| polar amino acid ABC transporter inner membrane protein [Rhodomicrobium vannielii ATCC 17100] gi|311220554|gb|ADP71922.1| polar amino acid ABC transporter, inner membrane subunit [Rhodomicrobium vannielii ATCC 17100] Length = 230 Score = 83.2 bits (204), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 60/214 (28%), Positives = 110/214 (51%), Gaps = 16/214 (7%) Query: 194 FVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP-----------TLVLIALKY 242 F+ G+V +L T L+ F G L L+ +S ++ LP +L L+ + + Sbjct: 18 FLQGMVFTLKLTILAAIFGTLFGTVLALMRLSG--VWPLPQIAGAYVNFVRSLPLLLVIF 75 Query: 243 QLHFDKPVLGQFNFIGGSTVSP--EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300 F P + Q +G P F++ I S + A F +EI+R+G+ ++P+GQ+ A Sbjct: 76 WFFFLVPFIAQ-KMVGSPRPIPIDPFLTALITFSLFEAVFFSEIMRAGIQSLPKGQVAAG 134 Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 ALGL++ + R ++LPQA R+++P L +Q + L +++SL + D + + G I + Sbjct: 135 YALGLSYTQVMRRIVLPQAFRNMLPVLLTQTIVLFQDTSLVYVLSLNDFLGIAGKIGQRD 194 Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394 G+ E+ + +Y +S + + RL A A+ Sbjct: 195 GRLTEMYIFAALVYFLISFAASQAVRRLQAHTAI 228 >gi|302669342|ref|YP_003832492.1| amino acid ABC transporter permease [Butyrivibrio proteoclasticus B316] gi|302397006|gb|ADL35910.1| amino acid ABC transporter permease protein [Butyrivibrio proteoclasticus B316] Length = 228 Score = 82.8 bits (203), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 39/122 (31%), Positives = 77/122 (63%) Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 + A+++EIVR+G++AV +GQMEA +LGL+ R ++LPQA+++IIPPL ++++ L+K Sbjct: 107 SGAYVSEIVRAGILAVDKGQMEAGRSLGLSKATTMRYIILPQAIKNIIPPLGNEFITLIK 166 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 +++ V DL V I ++T A ++ IY + ++++F+ +L ++ + Sbjct: 167 ETAIVGYVSLTDLTRVANQIASRTYDAFMPLIGAAVIYFVIIKLLSIFLEKLERRMRRSD 226 Query: 397 KK 398 + Sbjct: 227 NR 228 >gi|153010173|ref|YP_001371387.1| polar amino acid ABC transporter, inner membrane subunit [Ochrobactrum anthropi ATCC 49188] gi|151562061|gb|ABS15558.1| polar amino acid ABC transporter, inner membrane subunit [Ochrobactrum anthropi ATCC 49188] Length = 219 Score = 82.8 bits (203), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 70/241 (29%), Positives = 117/241 (48%), Gaps = 30/241 (12%) Query: 160 DHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKAL 219 D SIV P+ L LT+ + SFVLGI +L + A Sbjct: 5 DFSIVTPYTDLLLTGLWWTLVLTVSSA----FLSFVLGIAFALVV------LYAPAILAY 54 Query: 220 PLLYISTFLIFGLPTLVLIALKY----QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSC 275 P+ + +L G P L+ + L Y Q+ + P LG + I LS Sbjct: 55 PVRFF-MWLFMGTPLLLQLFLIYFGLVQIGINIPALG---------------AGIIGLSL 98 Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335 + A + A+I+R+G++AV GQME A ++G +H +A R V++PQA+R+ IPP+ + + LL Sbjct: 99 HFAVYNADIIRAGIVAVDPGQMEGARSIGFSHGQALRYVVIPQAIRNTIPPIGNNMIVLL 158 Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395 K++SL +G A+LV I++T E + IY +++++ + R+ K+ + Sbjct: 159 KDTSLVSIIGIAELVHSAQLAISETFSPFEFYITVAAIYYVVNLVLEAGLRRIERKVEVT 218 Query: 396 E 396 Sbjct: 219 R 219 >gi|293603254|ref|ZP_06685685.1| glutamate/aspartate ABC superfamily ATP binding cassette transporter, membrane protein [Achromobacter piechaudii ATCC 43553] gi|292818343|gb|EFF77393.1| glutamate/aspartate ABC superfamily ATP binding cassette transporter, membrane protein [Achromobacter piechaudii ATCC 43553] Length = 233 Score = 82.8 bits (203), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 63/165 (38%), Positives = 89/165 (53%), Gaps = 15/165 (9%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 + +P+L F FG+P L+ A L+ + EF+ IA+S Sbjct: 67 RNVPMLVHILFWYFGVPALLPQAASDWLN---------------SHGSEFIMSCIAISLV 111 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 +A+I E +RS + +P GQ+EAA ALGL + R V+LPQA R IPPL +Q L LLK Sbjct: 112 MSAYICEDLRSAVRGIPPGQVEAARALGLGFLRTMRCVVLPQAFRIAIPPLLNQTLLLLK 171 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 N+SLA+A+G +L + G I N T + E + IYL LS +I Sbjct: 172 NTSLAMAIGVTELTAAGREIENYTFRTFEAYAVVTVIYLVLSFLI 216 Score = 39.7 bits (91), Expect = 0.95, Method: Compositional matrix adjust. Identities = 25/76 (32%), Positives = 38/76 (50%) Query: 82 DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141 Y + + GFV T LA + A +G+L+ RL+ + + + YV RN+P Sbjct: 12 QGEYPSWLFRGFVTTLALAGLAWVLAFCVGSLLAVIRLTGSPVANAVIATYVAFHRNVPM 71 Query: 142 LVVIFFLYKSVLSVLP 157 LV I F Y V ++LP Sbjct: 72 LVHILFWYFGVPALLP 87 >gi|238855887|ref|ZP_04646176.1| amino acid ABC transporter permease protein [Lactobacillus jensenii 269-3] gi|282931561|ref|ZP_06337058.1| amino acid ABC transporter, permease protein [Lactobacillus jensenii 208-1] gi|238831550|gb|EEQ23898.1| amino acid ABC transporter permease protein [Lactobacillus jensenii 269-3] gi|281304317|gb|EFA96422.1| amino acid ABC transporter, permease protein [Lactobacillus jensenii 208-1] Length = 534 Score = 82.8 bits (203), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 42/120 (35%), Positives = 77/120 (64%) Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 +S T A++AE++R G++A P+GQ EAA ALG+TH + ++LPQA+++ +P +T++++ Sbjct: 390 VSINTGAYLAEVIRGGIMATPKGQFEAASALGMTHNQRMWNIILPQAIKNCLPSITNEFI 449 Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 +K++S+ + ++L VG TI +Q+ Q + L+ IYL L+ I N + K+ Sbjct: 450 VNIKDTSVLSIISVSELFFVGSTIASQSFQFFQTYLMISAIYLVLTFSITRIFNLIEKKL 509 >gi|32266981|ref|NP_861013.1| putative ABC-type amino-acid transporter permease protein [Helicobacter hepaticus ATCC 51449] gi|32263033|gb|AAP78079.1| putative ABC-type amino-acid transporter permease protein [Helicobacter hepaticus ATCC 51449] Length = 249 Score = 82.8 bits (203), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 37/114 (32%), Positives = 70/114 (61%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + + Y A+++E+VRSG++AVP+GQ EA+ + G T+ + R ++LPQ ++ I+PP+T+Q Sbjct: 121 LGVGAYHGAYVSEVVRSGILAVPKGQFEASASQGFTYTQQMRYIILPQTIKIILPPITNQ 180 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 +NL+KN+S+ + + +++ V + T L F+Y + +A F Sbjct: 181 VVNLIKNTSVLLIIAGGEIMYVADSYAGDTSNYAPAYLFAAFLYFIVCYPLAYF 234 Score = 37.4 bits (85), Expect = 4.4, Method: Compositional matrix adjust. Identities = 22/60 (36%), Positives = 34/60 (56%) Query: 90 LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 L GF T ++ ++ A I GT+ G S ++ R+YVE+F+N P ++ IFFLY Sbjct: 44 LSGFGYTLSVSILALLIALIFGTIGGVMATSKITILRAYTRMYVEIFQNTPLVIQIFFLY 103 >gi|319651742|ref|ZP_08005868.1| amino acid ABC transporter [Bacillus sp. 2_A_57_CT2] gi|317396561|gb|EFV77273.1| amino acid ABC transporter [Bacillus sp. 2_A_57_CT2] Length = 215 Score = 82.8 bits (203), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 45/129 (34%), Positives = 78/129 (60%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 +F S+ + L+ + A+IAEI R + ++ +GQMEA +LG+T A R ++LPQA R + Sbjct: 84 QFWSVVLGLAFHNGAYIAEIFRGSIQSIDKGQMEAGRSLGMTAGLAMRRIILPQAFRRAM 143 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 PPL +Q++ LK+SSLA +G +L +V T + + +LI YL L ++ ++ Sbjct: 144 PPLGNQFIIALKDSSLASFIGMYELFNVATTYGSNEYDYMSYLLIVAVYYLVLVLIFSIL 203 Query: 385 MNRLNAKIA 393 +N + ++A Sbjct: 204 VNMIEKRMA 212 >gi|227509453|ref|ZP_03939502.1| glutamine ABC superfamily ATP binding cassette transporter, substrate binding and permease protein [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227512150|ref|ZP_03942199.1| amino acid ABC superfamily ATP binding cassette transporter, substrate binding and permease protein [Lactobacillus buchneri ATCC 11577] gi|227084544|gb|EEI19856.1| amino acid ABC superfamily ATP binding cassette transporter, substrate binding and permease protein [Lactobacillus buchneri ATCC 11577] gi|227191165|gb|EEI71232.1| glutamine ABC superfamily ATP binding cassette transporter, substrate binding and permease protein [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 488 Score = 82.8 bits (203), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 61/202 (30%), Positives = 106/202 (52%), Gaps = 21/202 (10%) Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251 F ++G+VL+L R SR ++ + L + Y T I G P +V + Y Sbjct: 303 FGVLIGVVLALM--RFSR---QRWLRGLAISY--TEFIRGTPLMVQVMFVY--------- 346 Query: 252 GQFNFIGGSTVS-PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 F G ++ P +S IA+S + A++AEI+R G+ +V +GQ EAA +LGLT Sbjct: 347 ----FGIGVIINIPALISGMIAVSLNSGAYVAEIIRGGINSVGKGQTEAAESLGLTKGDM 402 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370 R V+LPQA ++I P L +++++L+K SS+ +G DL+ + T + + I + Sbjct: 403 MRYVILPQAFKNIWPALGNEFISLIKESSIVSIIGVTDLIYQLNIVRADTYRGVMPIFVA 462 Query: 371 MFIYLSLSIMIALFMNRLNAKI 392 M +Y ++ ++ +N K+ Sbjct: 463 MVLYFLMTFLLTRLLNHYEGKM 484 >gi|261420187|ref|YP_003253869.1| polar amino acid ABC transporter inner membrane subunit [Geobacillus sp. Y412MC61] gi|297529844|ref|YP_003671119.1| polar amino acid ABC transporter inner membrane protein [Geobacillus sp. C56-T3] gi|319766999|ref|YP_004132500.1| polar amino acid ABC transporter inner membrane protein [Geobacillus sp. Y412MC52] gi|261376644|gb|ACX79387.1| polar amino acid ABC transporter, inner membrane subunit [Geobacillus sp. Y412MC61] gi|297253096|gb|ADI26542.1| polar amino acid ABC transporter, inner membrane subunit [Geobacillus sp. C56-T3] gi|317111865|gb|ADU94357.1| polar amino acid ABC transporter, inner membrane subunit [Geobacillus sp. Y412MC52] Length = 216 Score = 82.8 bits (203), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 65/209 (31%), Positives = 109/209 (52%), Gaps = 35/209 (16%) Query: 190 FVFSFVLGIVLSLFATRLSRHFHE--KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247 FVF ++G++ LS+ +T + LPLL I F F LP + L D Sbjct: 34 FVFGIIIGVIRYTKIPVLSQLLAVLVETIRNLPLLLIIFFTYFALP-------EVGLKLD 86 Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSC---YTAAFIAEIVRSGLIAVPRGQMEAAIALG 304 K LY A+S + +A ++EIVRSGL ++ +GQ+EAA + G Sbjct: 87 K--------------------LYAAISALVIFESAMLSEIVRSGLQSIDKGQIEAARSSG 126 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN--QTGQ 362 LT+ + ++LPQA+R ++PP+ SQ+++LLK++SLA+ + +L++ IIN Sbjct: 127 LTYVQTLWYIILPQALRRMVPPIVSQFISLLKDTSLAIVISLPELMN-HAQIINGRNVNF 185 Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAK 391 I I ++ F+Y ++ ++L RL + Sbjct: 186 VIPIFILVAFMYFIVNYSLSLLSRRLEYR 214 Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust. Identities = 23/70 (32%), Positives = 41/70 (58%), Gaps = 4/70 (5%) Query: 84 SYATA----ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNI 139 +YA A +L GF+ T +AF ++ + + G ++G R + +++ + V VE RN+ Sbjct: 6 AYAPAHLKFLLQGFLVTLEVAFISIVLSFVFGIIIGVIRYTKIPVLSQLLAVLVETIRNL 65 Query: 140 PPLVVIFFLY 149 P L++IFF Y Sbjct: 66 PLLLIIFFTY 75 >gi|69246347|ref|ZP_00603903.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Enterococcus faecium DO] gi|258616329|ref|ZP_05714099.1| Glutamine transport system permease protein [Enterococcus faecium DO] gi|68195300|gb|EAN09751.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Enterococcus faecium DO] Length = 218 Score = 82.8 bits (203), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 56/166 (33%), Positives = 91/166 (54%), Gaps = 14/166 (8%) Query: 228 LIFGLPTLVLIALKYQLHFDKPVLG-QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286 +I LP L++I Y F P +G Q N F S AL+ + +A ++EI R Sbjct: 61 IIRNLPLLLIIFFTY---FALPQIGIQMNI---------FWSAVAALTIFESAMLSEIFR 108 Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346 +GL AVP+GQMEA ++ GLT+ + R ++LPQA +S+IP + SQ ++L+K++SLAV + Sbjct: 109 AGLNAVPKGQMEAGLSTGLTYVETMRTIVLPQAFKSMIPAIVSQLISLIKDTSLAVIISL 168 Query: 347 ADLVSVGGTIINQ-TGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 +L I Q T + + +I +Y + ++L L + Sbjct: 169 PELSHQARIIYGQNTNYVLPMFIIMTLMYFVVCYALSLLSGYLEKR 214 >gi|309813087|ref|ZP_07706813.1| ABC transporter, permease protein [Dermacoccus sp. Ellin185] gi|308432971|gb|EFP56877.1| ABC transporter, permease protein [Dermacoccus sp. Ellin185] Length = 495 Score = 82.8 bits (203), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 63/201 (31%), Positives = 107/201 (53%), Gaps = 14/201 (6%) Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252 SF +G+VL+L L+R ++IS F G P LV +A+ + F P LG Sbjct: 304 SFAIGLVLAL-GVALARMSANAALSWPARIFISIFR--GTPLLVQLAI---IFFGMPQLG 357 Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312 +SP + S IA S AA+ AEI+R+ +++VP+GQ EAA +G+ A R Sbjct: 358 -------IKLSP-WPSAIIAFSLNVAAYSAEIIRAAILSVPKGQWEAAETIGMNRATALR 409 Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372 ++LPQA+R +PPL++ ++L+K++SLA + ++ +G +E+ + Sbjct: 410 RIILPQALRVAVPPLSNTLISLVKDTSLASTILVTEMFRQAQIAAAPSGDFLELYGVAAA 469 Query: 373 IYLSLSIMIALFMNRLNAKIA 393 IY +L +++L RL ++ Sbjct: 470 IYWALCFILSLVQGRLENRLG 490 >gi|302548267|ref|ZP_07300609.1| His/Glu/Gln/Arg/opine family amino acid ABC transporter, permease [Streptomyces hygroscopicus ATCC 53653] gi|302465885|gb|EFL28978.1| His/Glu/Gln/Arg/opine family amino acid ABC transporter, permease [Streptomyces himastatinicus ATCC 53653] Length = 261 Score = 82.8 bits (203), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 65/215 (30%), Positives = 115/215 (53%), Gaps = 36/215 (16%) Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVL-------IALKY 242 F F V G+VL+L RLS + L + YI F G+P L++ + L + Sbjct: 69 FGFGLVAGLVLALM--RLS---QVPPYRWLSVAYIEFFR--GVPALLVFIALGFGVPLAF 121 Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302 Q+ D+ ++++ +AL AA++AE +R+G+ AVP+GQMEAA + Sbjct: 122 QVALDR-----------------YVTVMLALGLVGAAYMAETIRAGIRAVPKGQMEAARS 164 Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA----DLVSVGGTIIN 358 LG++H +A +++PQA R ++PPLT++ + L K+SSL +G + +L G +N Sbjct: 165 LGMSHGRAMVSIIIPQAFRIVLPPLTNELILLTKDSSLVYLLGLSLDQYELSKFGREALN 224 Query: 359 QTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393 Q +++ IL+ YL +++ + + L ++ A Sbjct: 225 QH-RSLTPILVAGLCYLLITVPLGQLVRWLESRTA 258 >gi|255026707|ref|ZP_05298693.1| hypothetical protein LmonocytFSL_10867 [Listeria monocytogenes FSL J2-003] Length = 486 Score = 82.8 bits (203), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 38/91 (41%), Positives = 67/91 (73%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+S IALS +AA++AEI+R+G+ AV +GQMEAA +LG+T + R ++LPQA+++I+P Sbjct: 356 FVSGCIALSLNSAAYVAEIIRAGISAVNKGQMEAARSLGMTQSASMRYIILPQAVKNILP 415 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356 L ++++ ++K SS+ +G +L+ + G + Sbjct: 416 ALGNEFVTVIKESSIVSVIGVTELMFMTGVV 446 >gi|57865359|ref|YP_189560.1| amino acid ABC transporter, permease protein [Staphylococcus epidermidis RP62A] gi|251811884|ref|ZP_04826357.1| ABC superfamily ATP binding cassette transporter, membrane protein [Staphylococcus epidermidis BCM-HMP0060] gi|282875171|ref|ZP_06284044.1| ABC transporter, permease protein [Staphylococcus epidermidis SK135] gi|57636017|gb|AAW52805.1| amino acid ABC transporter, permease protein [Staphylococcus epidermidis RP62A] gi|251804681|gb|EES57338.1| ABC superfamily ATP binding cassette transporter, membrane protein [Staphylococcus epidermidis BCM-HMP0060] gi|281295936|gb|EFA88457.1| ABC transporter, permease protein [Staphylococcus epidermidis SK135] gi|329734620|gb|EGG70931.1| ABC transporter, permease protein [Staphylococcus epidermidis VCU045] Length = 239 Score = 82.8 bits (203), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 58/207 (28%), Positives = 118/207 (57%), Gaps = 10/207 (4%) Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248 I + +F+LG++++LF T L R K + + +Y+S +I G P +V + + + + Sbjct: 34 ITLVTFILGLIIALF-TALMRISTSKLLRGIARVYVS--IIRGTPMIVQL---FIIFYGI 87 Query: 249 PVLGQF---NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305 P LG+ N T++P ++ I LS A+ +EI+R G++++P+GQ EAA ++G+ Sbjct: 88 PELGRLVTNNADNQWTLAPVIAAV-IGLSLNVGAYASEIIRGGILSIPKGQTEAAYSIGM 146 Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365 +R+ + ++LPQA+R IP L + +L+L+K++SL + A++ + + T + + Sbjct: 147 NYRQTVQRIILPQAIRVSIPALGNTFLSLIKDTSLLGFILVAEMFRKAQEVASTTYEYLT 206 Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKI 392 I L+ +Y + +I++ ++I Sbjct: 207 IYLLVALMYWVVCFVISIIQGWYESRI 233 >gi|329726529|gb|EGG62992.1| ABC transporter, permease protein [Staphylococcus epidermidis VCU144] gi|329735014|gb|EGG71311.1| ABC transporter, permease protein [Staphylococcus epidermidis VCU028] Length = 239 Score = 82.8 bits (203), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 58/207 (28%), Positives = 118/207 (57%), Gaps = 10/207 (4%) Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248 I + +F+LG++++LF T L R K + + +Y+S +I G P +V + + + + Sbjct: 34 ITLVTFILGLIIALF-TALMRISTSKLLRGIARVYVS--IIRGTPMIVQL---FIIFYGI 87 Query: 249 PVLGQF---NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305 P LG+ N T++P ++ I LS A+ +EI+R G++++P+GQ EAA ++G+ Sbjct: 88 PELGRLVTNNADNQWTLAPVIAAV-IGLSLNVGAYASEIIRGGILSIPKGQTEAAYSIGM 146 Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365 +R+ + ++LPQA+R IP L + +L+L+K++SL + A++ + + T + + Sbjct: 147 NYRQTVQRIILPQAIRVSIPALGNTFLSLIKDTSLLGFILVAEMFRKAQEVASTTYEYLT 206 Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKI 392 I L+ +Y + +I++ ++I Sbjct: 207 IYLLVALMYWVVCFIISIIQGWYESRI 233 >gi|222153166|ref|YP_002562343.1| transport system membrane protein [Streptococcus uberis 0140J] gi|222113979|emb|CAR42274.1| transport system membrane protein [Streptococcus uberis 0140J] Length = 219 Score = 82.8 bits (203), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 59/200 (29%), Positives = 104/200 (52%), Gaps = 14/200 (7%) Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252 SF+ G+ L + + R H K + + Y+S ++ G+P +V++ + L+F P Sbjct: 30 SFMTGVTLGILLAIMGRSQHRILQKMVKV-YVS--IMRGVPMIVVL---FMLYFGMP--- 80 Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312 FN P + YI S ++A+I+EI RS + AV GQ EAA ALG++ ++ + Sbjct: 81 YFNL-----QLPALLCAYIGFSLVSSAYISEIFRSSINAVDHGQWEAAQALGISKKRVIQ 135 Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372 V+LPQA R IPPL + ++++K+SSLA + D+ + + + + ++ F Sbjct: 136 KVILPQAFRIAIPPLGNVVVDMIKSSSLAAMITVPDIFQNAKIVGGREWDYMSMYILVAF 195 Query: 373 IYLSLSIMIALFMNRLNAKI 392 IY L + F + L ++ Sbjct: 196 IYWVLCYLFERFQSYLEDRL 215 >gi|313115991|ref|ZP_07801418.1| ABC transporter, permease protein [Faecalibacterium cf. prausnitzii KLE1255] gi|310621755|gb|EFQ05283.1| ABC transporter, permease protein [Faecalibacterium cf. prausnitzii KLE1255] Length = 254 Score = 82.8 bits (203), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 61/213 (28%), Positives = 111/213 (52%), Gaps = 21/213 (9%) Query: 193 SFVLGIVL-SLFATRLSRHFHEKTGKALPLL-------YISTFLIFGLPTLVLIALKYQL 244 + LGIVL S+ A H ++ G P+L I T +I G P +V + + + Sbjct: 55 ALALGIVLGSVVALVRVAHDQQRPGHKNPVLGFFNIICEIYTTIIRGTPMMVQLLIMSMV 114 Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304 F F +G +AL + A+++EI+R GL+AV GQMEA +LG Sbjct: 115 IFANS--RNFTMVGA-----------LALGINSGAYVSEIIRGGLMAVDPGQMEAGRSLG 161 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364 L + ++++PQA+R+++P L ++++ LLK++SL +G +L+ I+N+T +A+ Sbjct: 162 LNYMTTMVVIIIPQAIRAVLPALGNEFIVLLKDTSLITVIGGKELLYAAQGIMNRTYEAM 221 Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 +L IYL L ++ + + ++A ++ Sbjct: 222 FPLLGVALIYLVLVMLFTRLLAKFERRLAQSDR 254 >gi|241113462|ref|YP_002973297.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240861670|gb|ACS59336.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 510 Score = 82.8 bits (203), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 67/213 (31%), Positives = 110/213 (51%), Gaps = 24/213 (11%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 V ++G+ L++ SR LP I T + GLP +V I + Sbjct: 41 VLGVIIGMALAVMGISQSRWLR------LPA-RIYTDVFRGLPAIVTIL----------I 83 Query: 251 LGQ-FNFIGGSTVSPEFMSLYI-ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308 +GQ F IG P L I ALS A+I EI RSG+ +V RGQMEA AL ++H Sbjct: 84 IGQGFARIGREIFGPSPFPLGILALSLIAGAYIGEIFRSGIQSVERGQMEACRALSMSHG 143 Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF----ADLVSVGGTIINQTGQAI 364 + RL+++PQ +R ++P L +Q++ +K+SSL +G ++ VG TG Sbjct: 144 QGMRLIVIPQGIRRVLPALVNQFIGNVKDSSLVYFLGLLASEREIFRVGQDQAVVTGNLS 203 Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 ++L +F YL +++ + F+N ++A++ L ++ Sbjct: 204 PLLLAGVF-YLVITVPLTHFVNYIDARLRLGKQ 235 >gi|299536214|ref|ZP_07049527.1| amino-acid ABC transporter permease protein [Lysinibacillus fusiformis ZC1] gi|298728200|gb|EFI68762.1| amino-acid ABC transporter permease protein [Lysinibacillus fusiformis ZC1] Length = 236 Score = 82.8 bits (203), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 43/106 (40%), Positives = 69/106 (65%), Gaps = 2/106 (1%) Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 L+C AA+ AEI R+G+ ++ +GQMEAA +LGLTH +A R V+LPQA R +IPPL ++++ Sbjct: 102 LNC--AAYNAEIFRAGIQSIAKGQMEAARSLGLTHNQAMRKVILPQAFRRMIPPLGNEFI 159 Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378 LLK+SSL + D++ + + + E ++ +YL L+ Sbjct: 160 ALLKDSSLVTVIAAPDILYASKVVAGASFRFWEPYIVAALLYLVLT 205 >gi|288936957|ref|YP_003441016.1| polar amino acid ABC transporter inner membrane subunit [Klebsiella variicola At-22] gi|330005624|ref|ZP_08305302.1| ABC transporter, permease protein [Klebsiella sp. MS 92-3] gi|288891666|gb|ADC59984.1| polar amino acid ABC transporter, inner membrane subunit [Klebsiella variicola At-22] gi|328536190|gb|EGF62571.1| ABC transporter, permease protein [Klebsiella sp. MS 92-3] Length = 231 Score = 82.8 bits (203), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 46/119 (38%), Positives = 73/119 (61%) Query: 260 STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319 + ++ EF+ +AL AA+ +E +RSGL A+P GQ EAA ALG+ + +A LV+LPQ Sbjct: 93 NEMNAEFLFSLVALGLCQAAYFSEDIRSGLRAIPEGQNEAARALGMGYLRAMWLVILPQG 152 Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378 +R+ +P + + + L KN+SLA+ +G +L V I NQT + E ++ YL+ S Sbjct: 153 IRNALPSVINHTVLLFKNTSLAMVIGVTELTYVTRDIENQTFRTFEAYMVATVGYLAFS 211 >gi|312111275|ref|YP_003989591.1| polar amino acid ABC transporter inner membrane subunit [Geobacillus sp. Y4.1MC1] gi|311216376|gb|ADP74980.1| polar amino acid ABC transporter, inner membrane subunit [Geobacillus sp. Y4.1MC1] Length = 216 Score = 82.8 bits (203), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 57/180 (31%), Positives = 96/180 (53%), Gaps = 27/180 (15%) Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273 +T + LPLL I F F LP + L DK F + +AL Sbjct: 60 ETIRNLPLLLIIFFTYFALPEV-------GLKLDK-----------------FYAAIVAL 95 Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333 + +A ++EIVR GL ++ +GQ+EAA + GLT+ + ++LPQA+R ++PP+ SQ+++ Sbjct: 96 VVFESAMLSEIVRGGLNSIDKGQIEAARSSGLTYIQTLWYIILPQALRRMVPPIVSQFIS 155 Query: 334 LLKNSSLAVAVGFADLVSVGGTIIN--QTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 LLK++SLA+ + +L++ IIN I I ++ +Y ++ ++L RL K Sbjct: 156 LLKDTSLAIVIALPELMN-HAQIINGRNVNYVIPIFILVALMYFVVNYSLSLVSRRLEYK 214 >gi|295400875|ref|ZP_06810851.1| polar amino acid ABC transporter, inner membrane subunit [Geobacillus thermoglucosidasius C56-YS93] gi|294977138|gb|EFG52740.1| polar amino acid ABC transporter, inner membrane subunit [Geobacillus thermoglucosidasius C56-YS93] Length = 216 Score = 82.8 bits (203), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 57/180 (31%), Positives = 96/180 (53%), Gaps = 27/180 (15%) Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273 +T + LPLL I F F LP + L DK F + +AL Sbjct: 60 ETIRNLPLLLIIFFTYFALPEV-------GLKLDK-----------------FYAAIVAL 95 Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333 + +A ++EIVR GL ++ +GQ+EAA + GLT+ + ++LPQA+R ++PP+ SQ+++ Sbjct: 96 VVFESAMLSEIVRGGLNSIDKGQIEAARSSGLTYIQTLWYIILPQALRRMVPPIVSQFIS 155 Query: 334 LLKNSSLAVAVGFADLVSVGGTIIN--QTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 LLK++SLA+ + +L++ IIN I I ++ +Y ++ ++L RL K Sbjct: 156 LLKDTSLAIVIALPELMN-HAQIINGRNVNYVIPIFILVALMYFVVNYSLSLVSRRLEYK 214 >gi|259502414|ref|ZP_05745316.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus antri DSM 16041] gi|259169557|gb|EEW54052.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus antri DSM 16041] Length = 497 Score = 82.8 bits (203), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 45/123 (36%), Positives = 78/123 (63%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P ++ IA+S + A++AEI+RSG+ AV GQ+EA+ +LG++ R R V+LPQA+R+I Sbjct: 363 PAVIAGIIAISINSGAYVAEIIRSGIQAVSAGQVEASRSLGMSKRLTMRYVVLPQAVRNI 422 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 P L ++++ LLK+SSLA +G +L+ + + T + + + + M IY L+ + Sbjct: 423 WPALGNEFITLLKDSSLASVIGVTELMYQTQLVQSATYKGVLPLGVAMLIYFILTFTLTR 482 Query: 384 FMN 386 +N Sbjct: 483 LLN 485 >gi|271500409|ref|YP_003333434.1| polar amino acid ABC transporter inner membrane subunit [Dickeya dadantii Ech586] gi|270343964|gb|ACZ76729.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya dadantii Ech586] Length = 223 Score = 82.8 bits (203), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 46/133 (34%), Positives = 81/133 (60%), Gaps = 1/133 (0%) Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320 T+SP F + ALS +AAF AE+ R G++++ GQ E A ALG++ A R V+LPQA+ Sbjct: 87 TLSP-FAAAVTALSAQSAAFYAEVYRGGILSIAEGQWEGAKALGMSRPLALRRVILPQAL 145 Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380 R +IPPL + L+K++SLA ++ + +L+ I +Q+ + +EI + +Y +L + Sbjct: 146 RRMIPPLIERSFELIKSTSLASSLAYGELLYQAMQINSQSFRPLEIYSLAALLYFTLLFV 205 Query: 381 IALFMNRLNAKIA 393 ++L +++ Sbjct: 206 LSLLSQYAERRLS 218 >gi|223932682|ref|ZP_03624681.1| polar amino acid ABC transporter, inner membrane subunit [Streptococcus suis 89/1591] gi|223898652|gb|EEF65014.1| polar amino acid ABC transporter, inner membrane subunit [Streptococcus suis 89/1591] Length = 232 Score = 82.8 bits (203), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 41/121 (33%), Positives = 71/121 (58%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I + Y A+IAE++R+G+ AVP GQ EAA++ G T + R+++LPQA+ +I+PPLT+Q Sbjct: 105 ICIGLYHGAYIAEVIRAGIEAVPTGQTEAALSQGFTQSETMRIIILPQAIPTILPPLTNQ 164 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 +NL+KN++ + AD++ + + I F+Y + +A + R+ Sbjct: 165 VVNLIKNTATVAIISGADIMFMTKSWSAMNANYIPAFAGAAFLYFIMCFPVASWGRRIEE 224 Query: 391 K 391 K Sbjct: 225 K 225 Score = 37.0 bits (84), Expect = 5.6, Method: Compositional matrix adjust. Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 4/75 (5%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151 GF+ T ++ I A +G + G+ S NK++ I RVYVE ++N P LV +Y Sbjct: 27 GFLFTLAISVGAFIMAMFLGIVFGSLSSSKNKVLKIIARVYVEYYQNTPLLVQFMIVYYG 86 Query: 152 VLSVLPIPDHSIVLP 166 LP+ + +++P Sbjct: 87 ----LPLISNYVLMP 97 >gi|308094386|ref|ZP_05888982.2| general L-amino acid transport system permease protein AapM [Vibrio parahaemolyticus AN-5034] gi|308094323|gb|EFO44018.1| general L-amino acid transport system permease protein AapM [Vibrio parahaemolyticus AN-5034] Length = 349 Score = 82.8 bits (203), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 37/98 (37%), Positives = 67/98 (68%) Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315 F+ + + + + I + ++AA++AE+VR GL A+P+GQ EAA ALGL++ K T L++ Sbjct: 204 FLAEGSETDKLIRALIGVVMFSAAYMAEVVRGGLQAIPKGQYEAADALGLSYWKKTGLII 263 Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353 LPQA++ IP + + ++ L K++SL + +G D++ +G Sbjct: 264 LPQALKITIPSIVNTFIGLFKDTSLVLIIGMFDVLGIG 301 >gi|255281311|ref|ZP_05345866.1| amino acid ABC transporter, amino acid-binding/permease protein [Bryantella formatexigens DSM 14469] gi|255268268|gb|EET61473.1| amino acid ABC transporter, amino acid-binding/permease protein [Bryantella formatexigens DSM 14469] Length = 230 Score = 82.8 bits (203), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 55/164 (33%), Positives = 94/164 (57%), Gaps = 7/164 (4%) Query: 229 IFGLPTLVLIALKYQLHFDKPVLG---QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285 I G P LV I + +++ P++G GG +S +S +ALS + A+I EIV Sbjct: 62 IRGTPVLVQI---FIVYYGLPMMGIEIPSIMFGGVDIS-RLLSGTVALSVNSTAYICEIV 117 Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345 RSG+ ++ GQ E A+ALGL R+ V+LPQA+++IIP L ++++ ++K SS +G Sbjct: 118 RSGIQSIDIGQTEGAMALGLNGRRRMWYVILPQAIKNIIPALANEFVTVIKTSSQVSVIG 177 Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 A+L+ TI + + +E +LI IY ++ ++ + R+ Sbjct: 178 IAELMYAADTIRGISFRPMEPLLIVAVIYFIITFSLSCVIRRIE 221 >gi|171779738|ref|ZP_02920694.1| hypothetical protein STRINF_01575 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] gi|171281840|gb|EDT47274.1| hypothetical protein STRINF_01575 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] Length = 517 Score = 82.8 bits (203), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 71/219 (32%), Positives = 117/219 (53%), Gaps = 21/219 (9%) Query: 191 VFSFVLGIVLS--LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248 V S VL ++L + A R+S + L LYI +I GLP LV+++L + Sbjct: 25 VVSMVLALILGGVVTAARMSDNL---LISGLTKLYIE--VIRGLPMLVILSL---FFYGL 76 Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYT---AAFIAEIVRSGLIAVPRGQMEAAIALGL 305 P+LG N + + L AL+ T + F+AEI RSG+ AV GQ E A ++G Sbjct: 77 PMLG-LNIPKSTLFGVDLDRLIAALTGLTVGESVFVAEIYRSGIQAVDSGQFEGARSIGF 135 Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365 +A R V++PQA ++I+P L +++ N +K+SS A +G ADL+ TI + + + Sbjct: 136 NKFQAYRYVIIPQAFKNILPTLGNEFSNNIKSSSQASVIGVADLMFTASTIQGISYKPFQ 195 Query: 366 IILIWMFIYL----SLSIMIALF---MNRLNAKIALKEK 397 ++ F+YL S + ++A + MNR ++ L++K Sbjct: 196 AVIAVGFVYLVFTFSTTRIVAHYERKMNRSAEELTLRDK 234 Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust. Identities = 32/91 (35%), Positives = 53/91 (58%), Gaps = 4/91 (4%) Query: 83 SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142 SY IL G + T +L+ M+ A I+G +V A R+S N L++ + ++Y+EV R +P L Sbjct: 7 ESYGGFILDGALMTVFLSVVSMVLALILGGVVTAARMSDNLLISGLTKLYIEVIRGLPML 66 Query: 143 VVI-FFLYKSVLSVLPIPDHSIVLPFGMFLN 172 V++ F Y + L IP ++ FG+ L+ Sbjct: 67 VILSLFFYGLPMLGLNIPKSTL---FGVDLD 94 >gi|299066138|emb|CBJ37321.1| putative amino acid transmembrane abc transporter protein [Ralstonia solanacearum CMR15] Length = 232 Score = 82.8 bits (203), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 40/92 (43%), Positives = 66/92 (71%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 +F ++ AL + AA++AEIVR+G+ A+PRGQME+A +LGL + +A RLV+LPQA+R+++ Sbjct: 96 QFNTMLTALVVFDAAYLAEIVRAGIQALPRGQMESARSLGLPYLQAMRLVILPQALRNML 155 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356 P L +Q ++ +K +SL + ++ V G I Sbjct: 156 PSLVNQLVSTIKETSLGYIISLPEVSFVAGQI 187 >gi|228477514|ref|ZP_04062150.1| L-cystine transport system permease protein TcyB [Streptococcus salivarius SK126] gi|228250949|gb|EEK10137.1| L-cystine transport system permease protein TcyB [Streptococcus salivarius SK126] Length = 217 Score = 82.8 bits (203), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 52/163 (31%), Positives = 86/163 (52%), Gaps = 11/163 (6%) Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290 G+P LV++ + L+F P +G P + +I SC +AA++AEI RS + Sbjct: 64 GVPMLVVL---FILYFGLPYVG--------VQMPALLCAFIGFSCVSAAYMAEIFRSSIA 112 Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 AV +GQ EAA +LGL + R ++LPQAMR + PL + ++++K+SSLA + D+ Sbjct: 113 AVDKGQWEAARSLGLPQKSIIRRIILPQAMRIAVAPLGNVIIDMVKSSSLAAMITVPDIF 172 Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393 I + + + ++ IY +LS L L ++A Sbjct: 173 QNAKIIGGREYDYMSMYILIALIYWTLSFTFELLQGYLEKRLA 215 >gi|332111813|gb|EGJ11793.1| polar amino acid ABC transporter inner membrane subunit [Rubrivivax benzoatilyticus JA2] Length = 221 Score = 82.8 bits (203), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 42/131 (32%), Positives = 84/131 (64%), Gaps = 6/131 (4%) Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326 +S ++ + + AA+ +EI+R+G+ +VP+GQ+ A A+G+++R+ +LV+LPQA R+++P Sbjct: 92 LSAFVTFTLFEAAYYSEIMRAGIQSVPKGQVYAGYAMGMSYRQTMQLVVLPQAFRNMLPV 151 Query: 327 LTSQYLNLLKNSSLAVAVGFADLV---SVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 L +Q + L +++SL A+G DL+ + G N + +E L+ +Y + +++ Sbjct: 152 LLTQTIILFQDTSLVYAIGAYDLLKGFEIAGKNFN---RPVETYLVAAVVYFVICFGLSM 208 Query: 384 FMNRLNAKIAL 394 + RL A+IA+ Sbjct: 209 LVRRLQARIAI 219 >gi|330501774|ref|YP_004378643.1| polar amino acid ABC transporter inner membrane subunit [Pseudomonas mendocina NK-01] gi|328916060|gb|AEB56891.1| polar amino acid ABC transporter, inner membrane subunit [Pseudomonas mendocina NK-01] Length = 230 Score = 82.8 bits (203), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 38/129 (29%), Positives = 79/129 (61%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F S I + + A + EI+RSG+ ++P+GQ +A++ALG+T R++ V+LPQA+R+++P Sbjct: 100 FWSSVITFTLFEACYFCEIIRSGIQSLPKGQTQASMALGMTGRQSLFYVVLPQALRNMLP 159 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 + +Q + L +++SL + D + I + G+ +E+ + +Y +S++ + + Sbjct: 160 LMLTQTIVLFQDTSLVYILSITDFLGAAAKIAQRDGRLLEMYVFAALVYFVISLLASYAV 219 Query: 386 NRLNAKIAL 394 RL ++A+ Sbjct: 220 RRLQKRVAI 228 >gi|270262368|ref|ZP_06190640.1| transporter [Serratia odorifera 4Rx13] gi|270044244|gb|EFA17336.1| transporter [Serratia odorifera 4Rx13] Length = 220 Score = 82.8 bits (203), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 52/178 (29%), Positives = 98/178 (55%), Gaps = 15/178 (8%) Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLG-QFNFIGGSTVSPEFMSLYIALSCYTAAF 280 +Y+S F G P LIA + +++ P G +F+ F + I LS TAA+ Sbjct: 57 IYVSLFR--GTP---LIAQLFMIYYGLPQFGIEFD---------PFPAALIGLSLNTAAY 102 Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340 +E +R+ + ++ +GQ EAA ++G+T + R V+LPQA R+ +PPL + ++ L+K++SL Sbjct: 103 TSETLRAAISSIEKGQWEAAASIGMTRWQTMRRVILPQAARTALPPLGNSFIGLVKDTSL 162 Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 A + +L I ++T + + L IY ++ +++ NRL A + ++++ Sbjct: 163 AATIQVPELFRQAQLITSRTLEVFTLYLAASLIYWVMATLLSALQNRLEAHVNRQDQE 220 >gi|242243789|ref|ZP_04798233.1| ABC superfamily ATP binding cassette transporter, membrane protein [Staphylococcus epidermidis W23144] gi|242232757|gb|EES35069.1| ABC superfamily ATP binding cassette transporter, membrane protein [Staphylococcus epidermidis W23144] Length = 239 Score = 82.8 bits (203), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 58/207 (28%), Positives = 118/207 (57%), Gaps = 10/207 (4%) Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248 I + +F+LG++++LF T L R K + + +Y+S +I G P +V + + + + Sbjct: 34 ITLVTFILGLIIALF-TALMRISTSKLLRGIARVYVS--IIRGTPMIVQL---FIIFYGI 87 Query: 249 PVLGQF---NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305 P LG+ N T++P ++ I LS A+ +EI+R G++++P+GQ EAA ++G+ Sbjct: 88 PELGRLVTNNADNQWTLAP-VVAAVIGLSLNVGAYASEIIRGGILSIPKGQTEAAYSIGM 146 Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365 +R+ + ++LPQA+R IP L + +L+L+K++SL + A++ + + T + + Sbjct: 147 NYRQTVQRIILPQAIRVSIPALGNTFLSLIKDTSLLGFILVAEMFRKAQEVASTTYEYLT 206 Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKI 392 I L+ +Y + +I++ ++I Sbjct: 207 IYLLVALMYWVVCFVISIIQGWYESRI 233 >gi|153839325|ref|ZP_01991992.1| general L-amino acid transport system permease protein AapM [Vibrio parahaemolyticus AQ3810] gi|260366018|ref|ZP_05778496.1| general L-amino acid transport system permease protein AapM [Vibrio parahaemolyticus K5030] gi|260898003|ref|ZP_05906499.1| general L-amino acid transport system permease protein AapM [Vibrio parahaemolyticus Peru-466] gi|149747157|gb|EDM58145.1| general L-amino acid transport system permease protein AapM [Vibrio parahaemolyticus AQ3810] gi|308088044|gb|EFO37739.1| general L-amino acid transport system permease protein AapM [Vibrio parahaemolyticus Peru-466] gi|308114204|gb|EFO51744.1| general L-amino acid transport system permease protein AapM [Vibrio parahaemolyticus K5030] gi|328473626|gb|EGF44461.1| amino acid ABC transporter permease [Vibrio parahaemolyticus 10329] Length = 365 Score = 82.8 bits (203), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 37/98 (37%), Positives = 67/98 (68%) Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315 F+ + + + + I + ++AA++AE+VR GL A+P+GQ EAA ALGL++ K T L++ Sbjct: 220 FLAEGSETDKLIRALIGVVMFSAAYMAEVVRGGLQAIPKGQYEAADALGLSYWKKTGLII 279 Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353 LPQA++ IP + + ++ L K++SL + +G D++ +G Sbjct: 280 LPQALKITIPSIVNTFIGLFKDTSLVLIIGMFDVLGIG 317 >gi|94986057|ref|YP_605421.1| amino acid ABC transporter permease [Deinococcus geothermalis DSM 11300] gi|94556338|gb|ABF46252.1| amino acid ABC transporter membrane protein, PAAT family [Deinococcus geothermalis DSM 11300] Length = 231 Score = 82.8 bits (203), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 55/148 (37%), Positives = 84/148 (56%), Gaps = 11/148 (7%) Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290 G+P +VL+++ Y + P LG F + +AL Y+AA+ +EIVR GL Sbjct: 69 GIPLIVLLSVVY---YGLPALG--------LTLASFPAAVLALGLYSAAYTSEIVRGGLG 117 Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 +VP GQ+EAA +LGL+ A R V+LPQA R +P L +++++L+ SSLA AV +L Sbjct: 118 SVPIGQIEAARSLGLSRAGALRYVVLPQAWRVALPALGNEFISLILGSSLASAVTLQELF 177 Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLS 378 + G I T + E+ + IY L+ Sbjct: 178 AQGKYITGVTYRQFEVYAVLALIYFLLT 205 Score = 36.2 bits (82), Expect = 8.7, Method: Compositional matrix adjust. Identities = 16/43 (37%), Positives = 28/43 (65%) Query: 107 ATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 + ++GTL+G R+ L+ W+ +YVEV R IP +V++ +Y Sbjct: 38 SVMVGTLLGVARVFRMPLLGWLGNIYVEVVRGIPLIVLLSVVY 80 >gi|315604136|ref|ZP_07879202.1| amino acid ABC superfamily ATP binding cassette transporter, permease protein [Actinomyces sp. oral taxon 180 str. F0310] gi|315313842|gb|EFU61893.1| amino acid ABC superfamily ATP binding cassette transporter, permease protein [Actinomyces sp. oral taxon 180 str. F0310] Length = 320 Score = 82.8 bits (203), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 63/178 (35%), Positives = 98/178 (55%), Gaps = 23/178 (12%) Query: 224 ISTFLIFG--LPTLVLIALKYQLHFDKPVLG-----QFNFIGGSTVSPEFMSLYIALSCY 276 I T LIF LPTL L F P LG + F + +P +M+ +I L Sbjct: 111 IYTQLIFWSLLPTLY-----PTLSFGVPFLGSLWGWEIPFDTATYFTPFWMA-FIGLGLN 164 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 A++AEI+R+GL++VP+GQ EAA ALG+ R ++LPQAMR I+PP+ ++ +++LK Sbjct: 165 EGAYLAEIMRAGLLSVPKGQWEAATALGMPRATIFRRIILPQAMRVIVPPIGNETISMLK 224 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQA----IEIIL---IWMFIYLSLSIMIALFMNR 387 +SL A+ F ++ I Q GQA + +++ IW + SL + I F+ + Sbjct: 225 TTSLVSAIPFTLELTF---IARQRGQATFAPVPLLIAAAIWYLVITSLLMWIQSFIEK 279 >gi|28872471|ref|NP_795090.1| amino acid ABC transporter permease [Pseudomonas syringae pv. tomato str. DC3000] gi|213971203|ref|ZP_03399321.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tomato T1] gi|301382332|ref|ZP_07230750.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tomato Max13] gi|302060017|ref|ZP_07251558.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tomato K40] gi|302132164|ref|ZP_07258154.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tomato NCPPB 1108] gi|28855726|gb|AAO58785.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tomato str. DC3000] gi|213924072|gb|EEB57649.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tomato T1] gi|330874240|gb|EGH08389.1| amino acid ABC transporter permease [Pseudomonas syringae pv. morsprunorum str. M302280PT] gi|330968062|gb|EGH68322.1| amino acid ABC transporter permease [Pseudomonas syringae pv. actinidiae str. M302091] Length = 229 Score = 82.8 bits (203), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 65/191 (34%), Positives = 102/191 (53%), Gaps = 17/191 (8%) Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239 TLT++ A + +L I + + R SRH+ + ALP YI F G P LV + Sbjct: 18 TLTLELVAIAVIAGLILAIPMGI--ARASRHWPVR---ALPYAYI--FFFRGTPLLVQLF 70 Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295 L Y L QF+ + + P F + ++ +TAA+IAEI+R + AVP G Sbjct: 71 LVYY------GLAQFDAVRQGPLWPYLRDPFWCAVVTMTLHTAAYIAEILRGAIQAVPVG 124 Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355 ++EAA ALG++ KA ++LP+A R +P +++ + +LK S+LA V +L + T Sbjct: 125 EVEAARALGMSKWKALFYIVLPRAARIGLPAYSNEVILMLKASALASTVTLLELTGMART 184 Query: 356 IINQTGQAIEI 366 II +T +EI Sbjct: 185 IIARTYLPVEI 195 >gi|266624830|ref|ZP_06117765.1| glutamine ABC transporter, permease protein [Clostridium hathewayi DSM 13479] gi|288863291|gb|EFC95589.1| glutamine ABC transporter, permease protein [Clostridium hathewayi DSM 13479] Length = 230 Score = 82.8 bits (203), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 63/230 (27%), Positives = 118/230 (51%), Gaps = 26/230 (11%) Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGK-----ALPLLYI 224 F+ + + T + KI F+ ++GIVL F + R +E T K A+ +Y+ Sbjct: 13 FIEDNRWKYITDGLQNTLKITFFAVLIGIVLG-FLVAIIRSTYENTHKLKILNAVCTVYL 71 Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYI-ALSCYTAAFIAE 283 + +I G P +V + + Y F+ ++P ++ I A + A++AE Sbjct: 72 T--VIRGTPVVVQLMIVY-------------FVIFVAINPGMVTTAILAFGINSGAYVAE 116 Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343 I RSG+ ++ RGQ EA +LG + + +++PQA ++++P L ++++ LLK +S+A Sbjct: 117 IFRSGISSIERGQFEAGRSLGFNYAQTMWYIIMPQAFKNVVPTLANEFIVLLKETSVAGY 176 Query: 344 VGFADLVSVGGTIINQTGQA----IEIILIWMFIYLSLSIMIALFMNRLN 389 +G DL G I ++T A I + LI++ + + S ++ L RL+ Sbjct: 177 IGLQDLTKGGDIIKSRTYSAFMPLIAVALIYLVMVMIFSYLVKLLERRLS 226 >gi|254454756|ref|ZP_05068193.1| ABC transporter permease protein [Octadecabacter antarcticus 238] gi|198269162|gb|EDY93432.1| ABC transporter permease protein [Octadecabacter antarcticus 238] Length = 225 Score = 82.8 bits (203), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 41/127 (32%), Positives = 76/127 (59%), Gaps = 4/127 (3%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 +++ I S ++AF AE+ R+G++++ +GQ EAA A+G+ +A R ++LPQA++ +IP Sbjct: 90 YLAAAITFSIQSSAFFAEVFRAGIVSIEKGQWEAARAIGMQRPQAMRRIILPQAVKRMIP 149 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII----LIWMFIYLSLSIMI 381 T + + L+K ++L V +ADL+ + +T + IE+ LI+ F+ LS+ + Sbjct: 150 AFTERAIELMKTTTLVATVSYADLLYQANELAQKTFRPIEVFTVTALIYFFVIFGLSLCV 209 Query: 382 ALFMNRL 388 RL Sbjct: 210 QAVERRL 216 >gi|167759818|ref|ZP_02431945.1| hypothetical protein CLOSCI_02181 [Clostridium scindens ATCC 35704] gi|167662437|gb|EDS06567.1| hypothetical protein CLOSCI_02181 [Clostridium scindens ATCC 35704] Length = 230 Score = 82.8 bits (203), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 59/210 (28%), Positives = 113/210 (53%), Gaps = 20/210 (9%) Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGK-----ALPLLYISTFLIFGLPTLVLIALKY 242 ++ F+ ++GIVL F + R ++KTGK A+ LY++ +I G P +V + + Y Sbjct: 31 RVTFFAVIIGIVLG-FLVAIVRSTYDKTGKLRILNAICKLYLT--VIRGTPVVVQLLIIY 87 Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302 F G S VS +++ +A + A++AEI RSG+++V GQ EA + Sbjct: 88 -----------FVIFGSSDVSKVLVAV-MAFGLNSGAYVAEIFRSGIMSVDNGQFEAGRS 135 Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362 LG + + +++PQA ++++P L ++++ LLK +S++ + DL G I ++T Sbjct: 136 LGFNYVQTMIYIIMPQAFKNVLPALGNEFIVLLKETSVSGYIALQDLTKGGDIIRSRTYD 195 Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 A ++ IYL++ ++ +N L ++ Sbjct: 196 AFMPLIAVALIYLAMVLIFTKLVNMLERRL 225 >gi|307326880|ref|ZP_07606071.1| polar amino acid ABC transporter, inner membrane subunit [Streptomyces violaceusniger Tu 4113] gi|306887416|gb|EFN18411.1| polar amino acid ABC transporter, inner membrane subunit [Streptomyces violaceusniger Tu 4113] Length = 302 Score = 82.8 bits (203), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 45/123 (36%), Positives = 76/123 (61%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I L+ + A+IAE++RSGL+AVP GQ +AA ALGLT + + LPQA+R I+PP+ ++ Sbjct: 160 IGLTLHETAYIAELIRSGLLAVPDGQHQAASALGLTPAQIFFRITLPQALRVIVPPMGNE 219 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++LLK +SL + ADL+ I + Q + ++++ Y+ ++ +I L RL Sbjct: 220 LISLLKATSLVSVITLADLLYSVQLIYAKNFQTVPLLIVAAIWYMIITGVITLLQQRLER 279 Query: 391 KIA 393 ++ Sbjct: 280 RLG 282 >gi|169826053|ref|YP_001696211.1| amino-acid ABC transporter permease [Lysinibacillus sphaericus C3-41] gi|168990541|gb|ACA38081.1| Probable amino-acid ABC transporter permease protein [Lysinibacillus sphaericus C3-41] Length = 252 Score = 82.8 bits (203), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 43/106 (40%), Positives = 69/106 (65%), Gaps = 2/106 (1%) Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 L+C AA+ AEI R+G+ ++ +GQMEAA +LGLTH +A R V+LPQA R +IPPL ++++ Sbjct: 120 LNC--AAYNAEIFRAGIQSIAKGQMEAARSLGLTHNQAMRKVILPQAFRRMIPPLGNEFI 177 Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378 LLK+SSL + D++ + + + E ++ +YL L+ Sbjct: 178 ALLKDSSLVTVIAAPDILYASKVVAGASFRFWEPYMVAALLYLILT 223 >gi|77459026|ref|YP_348532.1| amino acid ABC transporter permease [Pseudomonas fluorescens Pf0-1] gi|77383029|gb|ABA74542.1| amino acid ABC transporter membrane protein, PAAT family [Pseudomonas fluorescens Pf0-1] Length = 281 Score = 82.8 bits (203), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 49/119 (41%), Positives = 75/119 (63%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IALS A+++EI R+G++AV GQ EAA ALGL ++LPQAMR+IIPP TSQ Sbjct: 152 IALSLNYGAYLSEIFRAGILAVAPGQREAAAALGLRPAATFIHIILPQAMRTIIPPTTSQ 211 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 ++++LK+SSL +G +++ + + + + IE++ IY LSI + L +RL Sbjct: 212 FISMLKDSSLISVMGVWEVMFLAQSYGRSSYRYIEMLTTAAAIYWLLSIGLELIQHRLE 270 >gi|146309286|ref|YP_001189751.1| polar amino acid ABC transporter, inner membrane subunit [Pseudomonas mendocina ymp] gi|145577487|gb|ABP87019.1| amino acid ABC transporter membrane protein 2, PAAT family [Pseudomonas mendocina ymp] Length = 256 Score = 82.8 bits (203), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 66/205 (32%), Positives = 109/205 (53%), Gaps = 17/205 (8%) Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240 LT++ A V +L + + + R SRH++ + ALP YI F G P LV + L Sbjct: 46 LTLELVAIAVVAGLILALPMGI--ARASRHWYVR---ALPYGYI--FFFRGTPLLVQLFL 98 Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLY----IALSCYTAAFIAEIVRSGLIAVPRGQ 296 Y L QF+ + + P Y I ++ +TAA+IAEI+R + AVP G+ Sbjct: 99 VYY------GLAQFDAVRQGPLWPYLRDPYWCAIITMTLHTAAYIAEILRGAIQAVPPGE 152 Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356 +EAA ALG++ +A ++LP+A R +P +++ + +LK S+LA V +L + TI Sbjct: 153 VEAAHALGMSRAQAMLYIILPRAARIGLPAYSNEVILMLKASALASTVTLLELTGMARTI 212 Query: 357 INQTGQAIEIILIWMFIYLSLSIMI 381 I +T +EI YL+++ ++ Sbjct: 213 IARTYLPVEIFFAAGLFYLAIAFVL 237 >gi|320103283|ref|YP_004178874.1| polar amino acid ABC transporter inner membrane subunit [Isosphaera pallida ATCC 43644] gi|319750565|gb|ADV62325.1| polar amino acid ABC transporter, inner membrane subunit [Isosphaera pallida ATCC 43644] Length = 577 Score = 82.8 bits (203), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 44/121 (36%), Positives = 74/121 (61%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P + + L+ +A+ AEI R+GL A+PRGQ+EAA ALG+T +A R V+LPQ +R + Sbjct: 418 PAIAAGVLGLAINYSAYEAEIYRAGLQAIPRGQLEAARALGMTLFQAIRRVVLPQTVRIV 477 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 +PP+T+ ++ + K++S+ + +L + N G +E L IYL++S+ +A Sbjct: 478 VPPVTNDFIAMFKDTSVCSVITLVELTKQYSILSNTQGGVVEFGLAAGAIYLAMSLPLAW 537 Query: 384 F 384 F Sbjct: 538 F 538 Score = 39.3 bits (90), Expect = 1.0, Method: Compositional matrix adjust. Identities = 21/65 (32%), Positives = 35/65 (53%) Query: 85 YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144 Y ++ T +LA + M A + G ++ GR+ K + W+ R YVEV R P ++ Sbjct: 343 YGPTLIAAAGMTIFLACAAMPLAILAGMVIALGRVYGPKPLDWLLRGYVEVIRGTPLMLQ 402 Query: 145 IFFLY 149 +FFL+ Sbjct: 403 LFFLF 407 >gi|163800830|ref|ZP_02194730.1| amino acid ABC transporter, permease protein [Vibrio sp. AND4] gi|159175179|gb|EDP59976.1| amino acid ABC transporter, permease protein [Vibrio sp. AND4] Length = 365 Score = 82.8 bits (203), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 37/98 (37%), Positives = 67/98 (68%) Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315 F+ + + + + I + ++AA++AE+VR GL A+P+GQ EAA ALGL++ K T L++ Sbjct: 220 FLSEGSETDKLIRALIGVVMFSAAYMAEVVRGGLQAIPKGQYEAADALGLSYWKKTGLII 279 Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353 LPQA++ IP + + ++ L K++SL + +G D++ +G Sbjct: 280 LPQALKITIPSIVNTFIGLFKDTSLVLIIGMFDVLGIG 317 >gi|146311433|ref|YP_001176507.1| polar amino acid ABC transporter, inner membrane subunit [Enterobacter sp. 638] gi|145318309|gb|ABP60456.1| amino acid ABC transporter membrane protein 1, PAAT family [Enterobacter sp. 638] Length = 258 Score = 82.8 bits (203), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 55/163 (33%), Positives = 83/163 (50%), Gaps = 13/163 (7%) Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV----------- 262 KTG+A+ +++S F P LV + Y ++ ++I G Sbjct: 52 KTGRAVVSVWVSLFR--NTPLLVQLLFWYFAAWNWLPFTLRDYINGEHTWSILPGDVWWF 109 Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322 +PEF+ L +T+AF+ E + SGL AV RGQ +AA+A G + + R +LLPQ + Sbjct: 110 TPEFLCSAWGLGVFTSAFLVEEIESGLQAVSRGQRQAALAQGFSSWQLFRFILLPQGLAH 169 Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365 P+ QYLNL+K SSLA +GFA+L I + A+E Sbjct: 170 AWQPVVGQYLNLMKLSSLASGIGFAELTYQVRQIESYNAHALE 212 Score = 40.4 bits (93), Expect = 0.43, Method: Compositional matrix adjust. Identities = 23/69 (33%), Positives = 37/69 (53%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L GF+ T W+ +GM+ A+ + L R + K + V+V +FRN P LV + F Sbjct: 18 LLSGFLTTLWVTLAGMVIASGLAILFLLLRTAGGKTGRAVVSVWVSLFRNTPLLVQLLFW 77 Query: 149 YKSVLSVLP 157 Y + + LP Sbjct: 78 YFAAWNWLP 86 >gi|111017996|ref|YP_700968.1| ABC amino acid transporter, permease component [Rhodococcus jostii RHA1] gi|110817526|gb|ABG92810.1| ABC amino acid transporter, permease component [Rhodococcus jostii RHA1] Length = 330 Score = 82.8 bits (203), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 53/158 (33%), Positives = 87/158 (55%), Gaps = 4/158 (2%) Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302 QL P + QF I ++ F+ I L AA++AEIVR+G+ +V GQ EA++A Sbjct: 138 QLDLGIPFVHQFVHIDLQGINAAFLFAVIGLGLNEAAYMAEIVRAGVNSVAEGQTEASVA 197 Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA-DLVSVGGTIINQTG 361 LG+T + R +LPQAMR IIPP ++ +++LK +SL AV ++ +L I Sbjct: 198 LGMTWSQTMRRTVLPQAMRVIIPPTGNELISMLKTTSLVTAVPYSLELYGRARDISGANF 257 Query: 362 QAIEIILI---WMFIYLSLSIMIALFMNRLNAKIALKE 396 Q I ++++ W SL ++ ++ R +K A ++ Sbjct: 258 QPIPLLMVAATWYLAITSLLMIGQFYLERYYSKGASRK 295 >gi|311103256|ref|YP_003976109.1| amino ABC transporter permease, 3-TM region, His/Glu/Gln/Arg/opine family domain-containing protein 3 [Achromobacter xylosoxidans A8] gi|310757945|gb|ADP13394.1| amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family domain protein 3 [Achromobacter xylosoxidans A8] Length = 257 Score = 82.8 bits (203), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 63/211 (29%), Positives = 104/211 (49%), Gaps = 18/211 (8%) Query: 190 FVFSFVLGIVLSLFATRLSRHFHE------KTGKALPLLYISTFLIFGLPTLVLIALKYQ 243 +VFS +LG VL + T SR + + + +PLL F LP L+ A Sbjct: 49 WVFSLLLGSVLGVMRTASSRLMNALGATYVEVFRNIPLLVQMFLWYFVLPELLPHAWGLA 108 Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 + GQF + + L Y +A +AE +R+G+ ++PRGQ +A AL Sbjct: 109 MKQMPQPWGQF------------VPAVLCLGFYGSARVAEQLRAGIQSLPRGQFQAGTAL 156 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363 GLT + R V+LP+A R ++PPLTS+++ +K SS+A+ +G +L ++ + Sbjct: 157 GLTEAQVYRYVILPEAFRIVLPPLTSEFMGTIKYSSVALTIGLLELTGQARSMAEFSFHI 216 Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394 E IYL ++ ++ L M L +A+ Sbjct: 217 FEAFSAATVIYLIINGIVVLGMRMLERHVAV 247 Score = 42.0 bits (97), Expect = 0.15, Method: Compositional matrix adjust. Identities = 27/92 (29%), Positives = 51/92 (55%), Gaps = 4/92 (4%) Query: 84 SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143 ++ I +G T LA + + + ++G+++G R ++++L+ + YVEVFRNIP LV Sbjct: 29 TFLQTIFIGVGWTLALALTAWVFSLLLGSVLGVMRTASSRLMNALGATYVEVFRNIPLLV 88 Query: 144 VIFFLYKSVLSVLP----IPDHSIVLPFGMFL 171 +F Y + +LP + + P+G F+ Sbjct: 89 QMFLWYFVLPELLPHAWGLAMKQMPQPWGQFV 120 >gi|311742428|ref|ZP_07716237.1| glutamine ABC superfamily ATP binding cassette transporter, permease protein [Aeromicrobium marinum DSM 15272] gi|311314056|gb|EFQ83964.1| glutamine ABC superfamily ATP binding cassette transporter, permease protein [Aeromicrobium marinum DSM 15272] Length = 285 Score = 82.8 bits (203), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 47/128 (36%), Positives = 75/128 (58%) Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328 L + L Y + +AE R+G+ AVP GQ+EAA ALGL R+V LPQA++ ++P L Sbjct: 142 LVVGLILYNGSVLAETFRAGMNAVPTGQVEAAYALGLRKNAVMRIVQLPQAIKIMLPALV 201 Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388 SQ + LK++SL + L G I N+ G ++ L+ IY+ L+++++LF L Sbjct: 202 SQCIVALKDTSLGYYIVAPGLTYAGRQIWNEFGNRLQTALVLAAIYIVLNLLLSLFATWL 261 Query: 389 NAKIALKE 396 +++ KE Sbjct: 262 QKRLSSKE 269 Score = 43.1 bits (100), Expect = 0.067, Method: Compositional matrix adjust. Identities = 19/47 (40%), Positives = 32/47 (68%) Query: 104 MIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYK 150 ++ A + G + AG+LS +++V W C V VE FR +P L++IFF++ Sbjct: 84 IVGALLFGVVFAAGKLSDHRVVRWPCWVVVEFFRAVPLLMLIFFVWS 130 >gi|83593423|ref|YP_427175.1| amino acid ABC transporter permease [Rhodospirillum rubrum ATCC 11170] gi|83576337|gb|ABC22888.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Rhodospirillum rubrum ATCC 11170] Length = 243 Score = 82.8 bits (203), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 36/86 (41%), Positives = 61/86 (70%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + + + C+T+A +AE +R+G+ +PRGQ A+ ALGLT + R +LLP A+R ++P Sbjct: 108 FYTSVVGIGCFTSARVAEQIRAGITTLPRGQAMASTALGLTLPQTYRYILLPMALRIVLP 167 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVS 351 PLTS++LN +KN+S+A+ + +L + Sbjct: 168 PLTSEFLNTVKNTSVALTISLMELTA 193 >gi|84494729|ref|ZP_00993848.1| putative ABC transporter permease protein [Janibacter sp. HTCC2649] gi|84384222|gb|EAQ00102.1| putative ABC transporter permease protein [Janibacter sp. HTCC2649] Length = 274 Score = 82.8 bits (203), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 46/130 (35%), Positives = 83/130 (63%), Gaps = 5/130 (3%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 + +++IAL +A++AE +R+G+ AVP GQ+EAA +LG+ ATR ++LPQA R I P Sbjct: 141 YGTVWIALGLVASAYMAETIRAGIQAVPPGQIEAARSLGMPAGVATRKIVLPQAFRVITP 200 Query: 326 PLTSQYLNLLKNSSLAVAVGFA----DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 PLT++ + L+K+SSL +G + +L G + N T + +++ F YL +++ + Sbjct: 201 PLTNEIILLVKDSSLVYVLGLSTTGYELTKYGRDLAN-TNANLTPLVVAGFCYLVITLPL 259 Query: 382 ALFMNRLNAK 391 ++ + R+ A+ Sbjct: 260 SILVRRMEAR 269 >gi|289167714|ref|YP_003445983.1| amino acid ABC transporter, permease protein [Streptococcus mitis B6] gi|288907281|emb|CBJ22116.1| amino acid ABC transporter, permease protein [Streptococcus mitis B6] Length = 227 Score = 82.8 bits (203), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 53/183 (28%), Positives = 104/183 (56%), Gaps = 7/183 (3%) Query: 220 PLLYISTFLIF---GLPTLVLIALKYQL-HFDKPVLGQFNFIGGSTVSPEFMSLYIALSC 275 PL++++ ++ G P +V I + + L H + P + Q +G + + +S Sbjct: 48 PLIWLANLYVWIFRGTPMMVQIMIAFALMHINAPTI-QVGILGVDL--SRLIPGILIISM 104 Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335 + A+I+E VR+G+ AVP+GQ+EAA +LG+ + A R V+LPQA+++I+P L ++++ ++ Sbjct: 105 NSGAYISETVRAGINAVPKGQLEAAYSLGIRPKNAMRYVILPQAIKNILPALGNEFITII 164 Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395 K+SSL A+G +L + T+ T + +L F YL ++ ++ + + + Sbjct: 165 KDSSLLSAIGVMELWNGAITVSATTYLPLTPLLFAAFYYLIMTSILTVTLKSFENYMGQG 224 Query: 396 EKK 398 +KK Sbjct: 225 DKK 227 >gi|229056201|ref|ZP_04195627.1| Amino acid ABC transproter, permease [Bacillus cereus AH603] gi|228721135|gb|EEL72667.1| Amino acid ABC transproter, permease [Bacillus cereus AH603] Length = 230 Score = 82.8 bits (203), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 69/226 (30%), Positives = 117/226 (51%), Gaps = 25/226 (11%) Query: 177 SFPTL------TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230 ++PTL T+ VF ++G++ + F R+S + K ++ +YI+ +I Sbjct: 8 TYPTLLKATIVTLQLTLTSLVFGSLIGLLFAFF--RIS---NNKILNSIAHVYIA--IIR 60 Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290 G P +V IA+ Y F +P F + IAL+ + A+I EI R + Sbjct: 61 GTPLIVQIAILY-----------FGITSVVVFTP-FWAGAIALAIHNGAYITEIFRGSIQ 108 Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 +V RGQ+EAA +LG+ + A R ++LPQA R +PPL +Q++ LK+SSL VG ++L Sbjct: 109 SVDRGQLEAARSLGMPYPLAMRRIILPQAFRLSLPPLGNQFIIGLKDSSLVAYVGMSELW 168 Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 G +I Q ++ +I YL+L ++ ++ L ++ KE Sbjct: 169 GSGLSIAAGNFQQLDTYIIVGVYYLALVLLFTYLVSLLEKRLQRKE 214 >gi|227823794|ref|YP_002827767.1| putative amino acid ABC transporter, permease protein [Sinorhizobium fredii NGR234] gi|227342796|gb|ACP27014.1| putative amino acid ABC transporter, permease protein [Sinorhizobium fredii NGR234] Length = 245 Score = 82.8 bits (203), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 69/232 (29%), Positives = 115/232 (49%), Gaps = 19/232 (8%) Query: 166 PFGMFLNNRGLSFPTLTMDT---NAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222 P +LN S PTL + + SFVLG+ L L T L R F A+ Sbjct: 19 PLPNWLNLMAESLPTLLWAGLIFTVPLTLLSFVLGLSLGL-VTALVRLFAPAPFVAVARF 77 Query: 223 YISTFLIFGLPTLV-LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281 Y+ ++I G P LV L + Y L +L F + I + A+ Sbjct: 78 YV--WVIRGTPLLVQLFVIFYGLPSMNILLDAFP------------AALIGFTLNIGAYT 123 Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341 +EI+R+ + +VPRGQ EAA ++G++ + R +LPQA R +PPL++ +++L+K++SLA Sbjct: 124 SEIIRATISSVPRGQWEAAYSIGMSWSQVMRRTILPQATRVAVPPLSNTFISLVKDTSLA 183 Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393 A+ +L I+ T + + + + IYL++S +++ RL + A Sbjct: 184 AAITVPELFQTAQRIVATTYEPLILYIEAALIYLAMSSVLSALQVRLEKRFA 235 >gi|111225075|ref|YP_715869.1| glutamate permease [Frankia alni ACN14a] gi|111152607|emb|CAJ64348.1| Glutamate permease [Frankia alni ACN14a] Length = 305 Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 58/180 (32%), Positives = 91/180 (50%), Gaps = 34/180 (18%) Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTG--------KALPLLYISTFLIFGLP 233 T+ VF+ VLG+ L++ R+SRH + ++LP+L + F GLP Sbjct: 73 TLRAALTAMVFAVVLGVALAM--ARMSRHRAVRIPATAVVELFRSLPVLMLILFAYLGLP 130 Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293 AL ++L F +L + L+ Y A I+EI R+G+ ++ Sbjct: 131 -----ALGWKLS-------------------AFWALVLGLTAYNGAVISEIFRAGIASID 166 Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353 RGQ EAA ALGL + RL+ PQA+R + P L SQ + LLK++SL + +++L+ G Sbjct: 167 RGQTEAAAALGLRPVQVFRLIQFPQAVRRMSPTLISQLVTLLKDTSLGFVIAYSELLRSG 226 Score = 36.6 bits (83), Expect = 7.7, Method: Compositional matrix adjust. Identities = 18/58 (31%), Positives = 33/58 (56%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 G ++T A + M+ A ++G + R+S ++ V VE+FR++P L++I F Y Sbjct: 69 GLLDTLRAALTAMVFAVVLGVALAMARMSRHRAVRIPATAVVELFRSLPVLMLILFAY 126 >gi|330832442|ref|YP_004401267.1| polar amino acid ABC transporter inner membrane subunit [Streptococcus suis ST3] gi|329306665|gb|AEB81081.1| polar amino acid ABC transporter, inner membrane subunit [Streptococcus suis ST3] Length = 232 Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 41/121 (33%), Positives = 71/121 (58%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I + Y A+IAE++R+G+ AVP GQ EAA++ G T + R+++LPQA+ +I+PPLT+Q Sbjct: 105 ICVGLYHGAYIAEVIRAGIEAVPTGQTEAALSQGFTQSETMRIIILPQAIPTILPPLTNQ 164 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 +NL+KN++ + AD++ + + I F+Y + +A + R+ Sbjct: 165 VVNLIKNTATVAIISGADIMFMTKSWSAMNANYIPAFAGAAFLYFIMCFPVASWGRRIEE 224 Query: 391 K 391 K Sbjct: 225 K 225 Score = 37.0 bits (84), Expect = 5.8, Method: Compositional matrix adjust. Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 4/75 (5%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151 GF+ T ++ I A +G + G+ S NK++ I RVYVE ++N P LV +Y Sbjct: 27 GFLFTLAISVGAFIMAMFLGIVFGSLSSSKNKVLKIIARVYVEYYQNTPLLVQFMIVYYG 86 Query: 152 VLSVLPIPDHSIVLP 166 LP+ + +++P Sbjct: 87 ----LPLISNYVLMP 97 >gi|321312271|ref|YP_004204558.1| glutamine ABC transporter permease [Bacillus subtilis BSn5] gi|320018545|gb|ADV93531.1| glutamine ABC transporter (permease) [Bacillus subtilis BSn5] Length = 218 Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 53/181 (29%), Positives = 98/181 (54%), Gaps = 27/181 (14%) Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273 +T + LPLL I F F LP I +K + I + ++ AL Sbjct: 60 ETIRNLPLLLIIFFTFFALPE---IGIKLE-------------ITAAAIT--------AL 95 Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333 + + +A ++EI+RSGL ++ +GQ+EAA + GL++ + +++PQA+R ++PP+ SQ+++ Sbjct: 96 TIFESAMLSEIIRSGLKSIDKGQIEAARSSGLSYTQTLFFIVMPQALRRMVPPIVSQFIS 155 Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQA---IEIILIWMFIYLSLSIMIALFMNRLNA 390 LLK++SLAV + +L+ I Q+ I L+ +Y +++ ++L RL Sbjct: 156 LLKDTSLAVVIALPELIHNAQIINGQSADGSYFFPIFLLAALMYFAVNYSLSLAARRLEV 215 Query: 391 K 391 + Sbjct: 216 R 216 Score = 37.0 bits (84), Expect = 5.9, Method: Compositional matrix adjust. Identities = 19/58 (32%), Positives = 34/58 (58%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 GF+ T ++AF +I + G + G R + +++ + V VE RN+P L++IFF + Sbjct: 18 GFLVTLYVAFISIILSFFFGLIAGTLRYAKVPVLSQLIAVLVETIRNLPLLLIIFFTF 75 >gi|313617589|gb|EFR89902.1| His/Glu/Gln/Arg/opine ABC transporter permease [Listeria innocua FSL S4-378] Length = 486 Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 38/91 (41%), Positives = 67/91 (73%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+S IALS +AA++AEI+R+G+ AV +GQMEAA +LG+T + R ++LPQA+++I+P Sbjct: 356 FVSGCIALSLNSAAYVAEIIRAGISAVNKGQMEAARSLGMTQGASMRYIILPQAVKNILP 415 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356 L ++++ ++K SS+ +G +L+ + G + Sbjct: 416 ALGNEFVTVIKESSIVSVIGVTELMFMTGVV 446 >gi|311106717|ref|YP_003979570.1| amino ABC transporter permease, 3-TM region, His/Glu/Gln/Arg/opine family domain-containing protein 11 [Achromobacter xylosoxidans A8] gi|310761406|gb|ADP16855.1| amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family domain protein 11 [Achromobacter xylosoxidans A8] Length = 229 Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 60/178 (33%), Positives = 92/178 (51%), Gaps = 14/178 (7%) Query: 233 PTLVLIALKYQLHFDKPVLGQ--FNFIGGSTVSPEFMSLY------------IALSCYTA 278 P L+ + H + P+L Q F + G + PE ++ IAL+ +A Sbjct: 47 PCRWLVDAYVEYHRNVPLLVQVLFWYFGMPELLPEGFRMWLYQHNAEMSLAAIALALGSA 106 Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338 A+IAE +RSGL A+P Q EAA ALG ++ + R V++PQA+R IPPL + L L KN+ Sbjct: 107 AYIAEDIRSGLRAIPFTQFEAARALGASYLQCMRFVIVPQAVRISIPPLVGRALLLFKNT 166 Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 S+A+A+G +L I N+T + +YL S +I L +R+ + L Sbjct: 167 SVAMAIGVMELTYQAREIENETYRTFATFGAATIMYLLGSFLIMLIGSRIYDRYRLNR 224 >gi|312139384|ref|YP_004006720.1| glutamate abc transporter integral membrane subunit glud [Rhodococcus equi 103S] gi|325672735|ref|ZP_08152431.1| glutamine ABC superfamily ATP binding cassette transporter, permease protein [Rhodococcus equi ATCC 33707] gi|311888723|emb|CBH48035.1| putative glutamate ABC transporter integral membrane subunit GluD [Rhodococcus equi 103S] gi|325556612|gb|EGD26278.1| glutamine ABC superfamily ATP binding cassette transporter, permease protein [Rhodococcus equi ATCC 33707] Length = 307 Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 52/166 (31%), Positives = 93/166 (56%), Gaps = 21/166 (12%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI---FGLPTLVLIALKYQLHFD 247 VF+ +LG +L + RLS H + ++S ++ +P L+L+ YQ Sbjct: 82 VFALILGAILGI--GRLSDHRWVR--------WLSGAIVEFFRAIPVLILMIFAYQ---- 127 Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307 Q+ S ++ ++ + L+ Y + IAEI+R+G++++P+GQ EAA ALG+ Sbjct: 128 --AFAQYGVFPSSQLA--LAAVVVGLTLYNGSVIAEIIRAGILSLPKGQTEAASALGMRK 183 Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353 + RL+LLPQA+ +++P L SQ + LK+S+L +G+ +L+ G Sbjct: 184 SQMMRLILLPQAITTMLPALVSQMVVALKDSALGYQIGYIELIRSG 229 Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 34/129 (26%), Positives = 63/129 (48%), Gaps = 17/129 (13%) Query: 23 RVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSD 82 R+ N + I+ ++L + L+ +N + +N + E D+ P+ Sbjct: 17 RIRNRIIAIVFGIVLVALALYVLNVLADNGQ----------------LEADK-WSPFLDH 59 Query: 83 SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142 ++ T +L G T A ++ A I+G ++G GRLS ++ V W+ VE FR IP L Sbjct: 60 FTWTTYLLPGLKGTLLAAALSIVFALILGAILGIGRLSDHRWVRWLSGAIVEFFRAIPVL 119 Query: 143 VVIFFLYKS 151 +++ F Y++ Sbjct: 120 ILMIFAYQA 128 >gi|288935884|ref|YP_003439943.1| polar amino acid ABC transporter inner membrane subunit [Klebsiella variicola At-22] gi|288890593|gb|ADC58911.1| polar amino acid ABC transporter, inner membrane subunit [Klebsiella variicola At-22] Length = 243 Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 74/212 (34%), Positives = 113/212 (53%), Gaps = 23/212 (10%) Query: 189 IFVFSFVLGIVLSL--FATRLSRHFHEKTGKALPLLYISTFLIF-GLPTLVLIALKYQLH 245 +F+ SF+LG VL+L A R+S H+ +G A LIF G P L+ + L Y Sbjct: 25 LFICSFILGGVLALGVLALRMS-HWPLASGFA-----KGYILIFRGSPLLIQLFLIYY-- 76 Query: 246 FDKPVLGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301 LGQF I S + P F+ +AL+ TAA+ AEI+R GL+A+P GQ+EA Sbjct: 77 ----GLGQFGVIRHSFLWPLLREPFICAVLALALCTAAYTAEILRGGLLAIPPGQIEAGQ 132 Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361 A G++ R ++ P +R +P +++ + L+K+++LA V D+ V II +T Sbjct: 133 ACGMSRWLLLRRIIAPVMLRYALPAYSTEAILLVKSTALASLVTVWDVTGVAQQIIQRTY 192 Query: 362 QAIEIILIWMFIYLSLSIMI----ALFMNRLN 389 + +E+ L IYL L+ +I AL RL Sbjct: 193 RTMEVFLCAAAIYLLLNFIIVQLYALLERRLT 224 >gi|256750907|ref|ZP_05491791.1| polar amino acid ABC transporter, inner membrane subunit [Thermoanaerobacter ethanolicus CCSD1] gi|256750242|gb|EEU63262.1| polar amino acid ABC transporter, inner membrane subunit [Thermoanaerobacter ethanolicus CCSD1] Length = 220 Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 39/86 (45%), Positives = 63/86 (73%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P F + AL+ +AA++AEI+R+G+ AV GQ EAA +LG+TH A R V++PQA+++I Sbjct: 86 PAFTAGVSALAINSAAYVAEIIRAGIQAVDPGQNEAARSLGMTHTMAMRYVIIPQAIKNI 145 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADL 349 +P L ++++ +LK S++ +GFADL Sbjct: 146 LPALGNEFIVMLKESAIISVIGFADL 171 >gi|16801415|ref|NP_471683.1| hypothetical protein lin2352 [Listeria innocua Clip11262] gi|16414875|emb|CAC97579.1| lin2352 [Listeria innocua Clip11262] Length = 486 Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 38/91 (41%), Positives = 67/91 (73%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+S IALS +AA++AEI+R+G+ AV +GQMEAA +LG+T + R ++LPQA+++I+P Sbjct: 356 FVSGCIALSLNSAAYVAEIIRAGISAVNKGQMEAARSLGMTQGASMRYIILPQAVKNILP 415 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356 L ++++ ++K SS+ +G +L+ + G + Sbjct: 416 ALGNEFVTVIKESSIVSVIGVTELMFMTGVV 446 >gi|270264106|ref|ZP_06192373.1| transporter [Serratia odorifera 4Rx13] gi|270041755|gb|EFA14852.1| transporter [Serratia odorifera 4Rx13] Length = 246 Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 55/222 (24%), Positives = 114/222 (51%), Gaps = 11/222 (4%) Query: 177 SFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV 236 ++P + A S + G+ ++ T L G A LL +P ++ Sbjct: 17 TWPDGPLGGAALTLAISLMAGVASAVLGTLLGVALAMSRGVAAGLLAAVLGFFRAIPVIM 76 Query: 237 LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296 LI + +F P+L + PE ++ AL+ +A++A V++G++A+ GQ Sbjct: 77 LI---FWTYFLLPILFGVDI-------PEITTVVCALALIASAYLAHAVKAGIVAIGPGQ 126 Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356 +A ++LGLT + R+++LPQA+R ++P +Q+++L+K++SLA VG ++L + + Sbjct: 127 WQAGLSLGLTRWQTLRMIVLPQALRMMVPSFINQWISLIKDTSLAYIVGVSELTFLATQV 186 Query: 357 INQTG-QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 N++ +E+ L +Y + + L N +N +++ + + Sbjct: 187 NNRSMVYPMEVFLFVALVYFVFCLALDLLANAVNRRLSPQAR 228 >gi|283956347|ref|ZP_06373827.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Campylobacter jejuni subsp. jejuni 1336] gi|283792067|gb|EFC30856.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Campylobacter jejuni subsp. jejuni 1336] Length = 261 Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 44/121 (36%), Positives = 73/121 (60%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I LSC++AA++AEI R+G++++ Q+E+A ALGL + V+ PQA+++I+ PL+ Q Sbjct: 138 IILSCFSAAYLAEIFRAGILSISISQLESARALGLKEMQVFAYVIFPQALKNILAPLSGQ 197 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 + NL+K+SSL + +L I + T +E +I YL L++ I +F L Sbjct: 198 FANLIKDSSLLSVIAVNELTQSAQEINSYTFATLEAYVILAITYLVLTLPINIFSRYLER 257 Query: 391 K 391 K Sbjct: 258 K 258 Score = 36.6 bits (83), Expect = 6.4, Method: Compositional matrix adjust. Identities = 21/82 (25%), Positives = 42/82 (51%) Query: 68 AGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAW 127 F I +++ ++Y L GF+NT ++F ++ + I+G + A LS+ + + Sbjct: 39 CSFSISAYHFDFSAIATYKEKFLQGFLNTLIISFFSLLLSIILGGVFCAFSLSSIVFLRF 98 Query: 128 ICRVYVEVFRNIPPLVVIFFLY 149 + Y+E+ R P LV + +Y Sbjct: 99 LSIFYIELIRGTPLLVQVLLIY 120 >gi|56420514|ref|YP_147832.1| glutamine ABC transporter permease [Geobacillus kaustophilus HTA426] gi|56380356|dbj|BAD76264.1| glutamine ABC transporter (permease) [Geobacillus kaustophilus HTA426] Length = 216 Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 64/209 (30%), Positives = 109/209 (52%), Gaps = 35/209 (16%) Query: 190 FVFSFVLGIVLSLFATRLSRHFHE--KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247 FVF ++G++ LS+ +T + LPLL I F F LP + L D Sbjct: 34 FVFGIIIGVIRYTKIPVLSQLLAVLVETIRNLPLLLIIFFTYFALP-------EVGLKLD 86 Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSC---YTAAFIAEIVRSGLIAVPRGQMEAAIALG 304 K +Y A+S + +A ++EIVRSGL ++ +GQ+EAA + G Sbjct: 87 K--------------------MYAAISALVIFESAMLSEIVRSGLQSIDKGQIEAARSSG 126 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN--QTGQ 362 LT+ + ++LPQA+R ++PP+ SQ+++LLK++SLA+ + +L++ IIN Sbjct: 127 LTYMQTLWYIILPQALRRMVPPIVSQFISLLKDTSLAIVISLPELMN-HAQIINGRNVNF 185 Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAK 391 I I ++ F+Y ++ ++L RL + Sbjct: 186 VIPIFILVAFMYFIVNYSLSLLSRRLEYR 214 Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust. Identities = 23/70 (32%), Positives = 41/70 (58%), Gaps = 4/70 (5%) Query: 84 SYATA----ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNI 139 +YA A +L GF+ T +AF ++ + + G ++G R + +++ + V VE RN+ Sbjct: 6 AYAPAHLKFLLQGFLVTLEVAFISIVLSFVFGIIIGVIRYTKIPVLSQLLAVLVETIRNL 65 Query: 140 PPLVVIFFLY 149 P L++IFF Y Sbjct: 66 PLLLIIFFTY 75 >gi|13473618|ref|NP_105186.1| amino acid ABC transporter, permease protein [Mesorhizobium loti MAFF303099] gi|14024368|dbj|BAB50972.1| amino acid ABC transporter, permease protein [Mesorhizobium loti MAFF303099] Length = 269 Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 44/109 (40%), Positives = 73/109 (66%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +AL+ +AFI+E+ R+G+ AV +GQ+EAA ALGL+ + RL++ PQA+R+I+PPL + Sbjct: 142 MALTIGYSAFISEVFRAGIQAVEKGQIEAAKALGLSRTQRFRLIVFPQAIRTILPPLGND 201 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379 ++ L+K+SSL +G AD+ +G + + E I +IYL L++ Sbjct: 202 FVALVKDSSLVSVLGVADITQMGKIYAAGSFRFFETYSIVAYIYLILTV 250 >gi|224367958|ref|YP_002602121.1| GltJ1 [Desulfobacterium autotrophicum HRM2] gi|223690674|gb|ACN13957.1| GltJ1 [Desulfobacterium autotrophicum HRM2] Length = 242 Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 59/208 (28%), Positives = 109/208 (52%), Gaps = 19/208 (9%) Query: 193 SFVLGIVLSLFA---TRLSRHFHEKTG---KALPLLYISTFLIFGLPTLVLIALKYQLHF 246 S ++GI++ F R R F E + +PLL F F +PTL+ + ++ Sbjct: 38 SLLMGIIIGTFRITRNRPLRIFAEAYTEFFRDIPLLVQLFFWYFAMPTLLPEQTRIWMYQ 97 Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306 + P NF EF + + LS Y+++ +AE +R+G+ ++ Q+ AA++ G + Sbjct: 98 EIP-----NF--------EFWIVVVGLSLYSSSRMAEQIRAGINSISPDQLNAALSSGFS 144 Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 H +A R ++LP A+R +IPPLT++ L + KN++LA+ VG + + + T +E Sbjct: 145 HYQAYRYIILPLAVRLVIPPLTTEALTVFKNTALAMTVGVLETTFMSQQVEAYTFHGLEA 204 Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIAL 394 IY+ +++++ M L K+A+ Sbjct: 205 TTAACIIYMIITLVVVGIMGLLEKKLAI 232 Score = 39.3 bits (90), Expect = 1.0, Method: Compositional matrix adjust. Identities = 22/76 (28%), Positives = 39/76 (51%) Query: 82 DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141 + Y +L G T L + ++G ++G R++ N+ + Y E FR+IP Sbjct: 13 EEPYGGWLLSGVATTVKLGIICCFLSLLMGIIIGTFRITRNRPLRIFAEAYTEFFRDIPL 72 Query: 142 LVVIFFLYKSVLSVLP 157 LV +FF Y ++ ++LP Sbjct: 73 LVQLFFWYFAMPTLLP 88 >gi|254451333|ref|ZP_05064770.1| peptidyl-dipeptidase Dcp protein [Octadecabacter antarcticus 238] gi|198265739|gb|EDY90009.1| peptidyl-dipeptidase Dcp protein [Octadecabacter antarcticus 238] Length = 960 Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 47/127 (37%), Positives = 77/127 (60%), Gaps = 2/127 (1%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IAL+ +AFIAE+ R+GL ++ +GQ+EAA ALGL+ + R ++ PQA R I+PPL + Sbjct: 138 IALTIGYSAFIAEVFRAGLQSIEKGQIEAAEALGLSPWRRFRHIVFPQAFRRILPPLGND 197 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++ ++K+SSL +G D+ G + E + IYL+++I ++L + RL Sbjct: 198 FIAMVKDSSLVSVLGVLDVTQAGKITAAGNFRYFESYNVLALIYLTMTIGLSLGLRRLEH 257 Query: 391 KIALKEK 397 L+EK Sbjct: 258 H--LREK 262 >gi|260461455|ref|ZP_05809702.1| polar amino acid ABC transporter, inner membrane subunit [Mesorhizobium opportunistum WSM2075] gi|259032525|gb|EEW33789.1| polar amino acid ABC transporter, inner membrane subunit [Mesorhizobium opportunistum WSM2075] Length = 226 Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 59/202 (29%), Positives = 108/202 (53%), Gaps = 14/202 (6%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 + SFVLG+ + L A L R F K AL Y+ F G P LV + + + + P Sbjct: 28 LLSFVLGLTVGLGAA-LGRLFGPKPLVALVRFYVWIFR--GTPLLVQL---FLIFYGLPS 81 Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 +G + F + I + A+ +EI+R+ + +VP+GQ EAA ++G+T +A Sbjct: 82 VG--------ILLDAFTAALIGFTLNIGAYTSEIIRAAIGSVPKGQWEAAYSIGMTWSQA 133 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370 R +LPQA R +PPL++ +++L+K++SLA A+ ++ I+ T + + + + Sbjct: 134 MRRTILPQAGRVAVPPLSNTFISLVKDTSLAAAITVPEMFQAAQRIVATTYEPLILYVEA 193 Query: 371 MFIYLSLSIMIALFMNRLNAKI 392 +YL++S +++ RL ++ Sbjct: 194 AILYLAMSSVLSALQTRLEERL 215 >gi|227833322|ref|YP_002835029.1| glutamate ABC transport system, permease protein [Corynebacterium aurimucosum ATCC 700975] gi|262184306|ref|ZP_06043727.1| glutamate ABC transport system, permease protein [Corynebacterium aurimucosum ATCC 700975] gi|227454338|gb|ACP33091.1| glutamate ABC transport system, permease protein [Corynebacterium aurimucosum ATCC 700975] Length = 312 Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 60/189 (31%), Positives = 102/189 (53%), Gaps = 20/189 (10%) Query: 170 FLNNRGLS---FPTL--TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224 FLNN+ + P L T+ + A V + V GI+ L RLS + + L + Sbjct: 56 FLNNQTWTTYLLPGLRGTILSAAASIVLAIVFGIIFGL--GRLSENVFVRG-----LCGV 108 Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284 +P L+L+ YQL ++ + ++ F ++ AL+ Y + +AEI Sbjct: 109 VVEFFRAIPVLLLMIFAYQL------FAIYDVVPSKQLA--FSAVVFALTLYNGSVVAEI 160 Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344 +RSG+ ++P+GQ EAA ALGL+H + R +LLPQA+ +++P L +Q + LK+S+L + Sbjct: 161 LRSGIKSLPKGQTEAARALGLSHGQTMRTILLPQAVAAMLPALIAQMVIALKDSALGYQI 220 Query: 345 GFADLVSVG 353 G+ ++V G Sbjct: 221 GYVEVVRSG 229 Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 42/151 (27%), Positives = 70/151 (46%), Gaps = 26/151 (17%) Query: 15 RMKFLYDM-----RVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAG 69 R LYD + N+ II A+L + W ++ L ER Sbjct: 4 RATVLYDAPGPKGKRRNLIYTIITAVLSVAVLYWVLST----------------LGERG- 46 Query: 70 FEIDQGI-VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWI 128 ++D + P+ ++ ++ T +L G T A + ++ A + G + G GRLS N V + Sbjct: 47 -QLDSALWTPFLNNQTWTTYLLPGLRGTILSAAASIVLAIVFGIIFGLGRLSENVFVRGL 105 Query: 129 CRVYVEVFRNIPPLVVIFFLYK--SVLSVLP 157 C V VE FR IP L+++ F Y+ ++ V+P Sbjct: 106 CGVVVEFFRAIPVLLLMIFAYQLFAIYDVVP 136 >gi|320008164|gb|ADW03014.1| polar amino acid ABC transporter, inner membrane subunit [Streptomyces flavogriseus ATCC 33331] Length = 228 Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 50/139 (35%), Positives = 81/139 (58%) Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317 GG F + LS YTAAF+ E +RSG+ VP GQ EAA ALGL+ + RL++LP Sbjct: 90 GGDFEVINFRLAVLGLSLYTAAFVCEALRSGINTVPAGQAEAARALGLSFTQVLRLIILP 149 Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377 QA R+++ PL + + L KN+++A A+G + + +I Q I I ++ F ++ L Sbjct: 150 QAFRAVVNPLANVLIALTKNTTVAAAIGVVEAAYLMKDMIEAEAQLILISAVFAFGFICL 209 Query: 378 SIMIALFMNRLNAKIALKE 396 ++ L + ++ K+A+K Sbjct: 210 TLPTGLLLGWVSKKVAVKR 228 >gi|222087540|ref|YP_002546077.1| amino acid ABC transporter [Agrobacterium radiobacter K84] gi|221724988|gb|ACM28144.1| amino acid ABC transporter [Agrobacterium radiobacter K84] Length = 274 Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 46/128 (35%), Positives = 77/128 (60%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +AL AAFIAE+ R+G+ AV GQ+EAA ALGL+ + R V+ PQA R I PPL++ Sbjct: 147 VALMIAYAAFIAEVFRAGIQAVDPGQIEAAKALGLSRYRRFRHVIAPQAFRVIFPPLSND 206 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++ ++K+SSL +G AD+ + + + + E I +IYL L+I ++L + + Sbjct: 207 FIAMVKDSSLVSVLGVADITQLAKIYSSGSFRYFESYSILAYIYLILTIGLSLVLRKFEK 266 Query: 391 KIALKEKK 398 ++ + + Sbjct: 267 RMRERHMR 274 >gi|213965269|ref|ZP_03393466.1| ABC-type amino acid transport system, permease component [Corynebacterium amycolatum SK46] gi|213952121|gb|EEB63506.1| ABC-type amino acid transport system, permease component [Corynebacterium amycolatum SK46] Length = 326 Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 48/141 (34%), Positives = 85/141 (60%), Gaps = 4/141 (2%) Query: 260 STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319 + +S F+ ++ L +A++AEIVR+G+ AVP GQ EA+ ALG++ + R +LPQA Sbjct: 150 TVLSNTFVLAFVGLGLNESAYMAEIVRAGIQAVPEGQTEASKALGMSWWQTVRRTILPQA 209 Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFA-DLVSVGGTIINQTGQAIEIILI---WMFIYL 375 MR IIPP +++++LLK +SL +AV F+ +L I N + ++L+ W + Sbjct: 210 MRIIIPPTGNEFISLLKTTSLVIAVPFSLELYGRSTDIANALFLPVPMLLVAATWYLVIT 269 Query: 376 SLSIMIALFMNRLNAKIALKE 396 S+ ++ ++ R A+ A ++ Sbjct: 270 SILMVGQFYLERYFARGATRQ 290 >gi|294083905|ref|YP_003550662.1| amino acid ABC transporter permease [Candidatus Puniceispirillum marinum IMCC1322] gi|292663477|gb|ADE38578.1| amino acid ABC transporter permease protein [Candidatus Puniceispirillum marinum IMCC1322] Length = 287 Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 47/128 (36%), Positives = 77/128 (60%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 F + + L+ + +F AEI+R G+ AV RGQ EAA A GL+ R V++PQA+ I+ Sbjct: 156 RFWAGVLCLAAFEGSFAAEIIRGGIQAVERGQYEAADATGLSKFDKYRYVIVPQALPLIL 215 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 PPLT ++L+K+S++ + A+L + G +I+ T A EI I +YL L+ +++ Sbjct: 216 PPLTGLLISLIKHSAIVSVIAVAELTTEGLNLISDTYMAFEIWFIVAGMYLVLTTSLSVM 275 Query: 385 MNRLNAKI 392 +N L K+ Sbjct: 276 VNILEVKM 283 >gi|217963588|ref|YP_002349266.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Listeria monocytogenes HCC23] gi|217332858|gb|ACK38652.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Listeria monocytogenes HCC23] gi|307571836|emb|CAR85015.1| amino acid ABC transporter, amino acid-binding/permease protein [Listeria monocytogenes L99] Length = 486 Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 38/91 (41%), Positives = 67/91 (73%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+S IALS +AA++AEI+R+G+ AV +GQMEAA +LG+T + R ++LPQA+++I+P Sbjct: 356 FVSGCIALSLNSAAYVAEIIRAGISAVNKGQMEAARSLGMTQGASMRYIILPQAVKNILP 415 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356 L ++++ ++K SS+ +G +L+ + G + Sbjct: 416 ALGNEFVTVIKESSIVSVIGVTELMFMTGVV 446 >gi|242240917|ref|YP_002989098.1| polar amino acid ABC transporter inner membrane subunit [Dickeya dadantii Ech703] gi|242132974|gb|ACS87276.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya dadantii Ech703] Length = 292 Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 59/212 (27%), Positives = 113/212 (53%), Gaps = 9/212 (4%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF-GLPTLVLIALKYQLHFDKP 249 V + LGI+ + A + H L + + IF G P ++ + L + L P Sbjct: 84 VLAMALGILFGVIAAIM----HMSPNPVLHYVSVGYAWIFRGTPLILQLLLWFNLALVFP 139 Query: 250 VL---GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306 + G F+ + ++P F +L + LS A+ +E+VR+GL++V GQ EAA A+G+ Sbjct: 140 RITLPGVFSVETVTVMTPFFAAL-LGLSINQGAYTSEVVRAGLLSVDIGQYEAAKAIGMP 198 Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 +A R ++LPQAMR IIPP+ +++++++K +SLA + +++L+ I + +E+ Sbjct: 199 RLQALRRIILPQAMRVIIPPVGNEFISMIKTTSLASMIQYSELLYNTQNIYYANARVMEL 258 Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 + + YL + +++ NRL + ++ Sbjct: 259 LFVAGIWYLMVVTVLSFGQNRLEKYFSRGNRR 290 >gi|167589679|ref|ZP_02382067.1| glutamine ABC transporter permease protein [Burkholderia ubonensis Bu] Length = 218 Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 60/186 (32%), Positives = 96/186 (51%), Gaps = 17/186 (9%) Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252 FV+G++ +F R + K L +YI LI G P +V + L+F P+L Sbjct: 33 GFVVGMIAGMF-----RAYGPKAMNVLAQVYIE--LIRGTPIVVQVMF---LYFALPLLA 82 Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312 G + IA++ + A++AE+VR L+++P+G EA +A+GL+ + Sbjct: 83 HIRIDG-------LTAAIIAITVNSGAYLAEVVRGALLSIPKGLTEAGLAMGLSMPRVLL 135 Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372 V+ P A R +IPPL +Q + LK++SL + +G +L G II QA+EI Sbjct: 136 KVVGPLAFRRLIPPLGNQCIVSLKDTSLFIVIGVGELTRKGQEIIAGNFQAVEIWTAVAV 195 Query: 373 IYLSLS 378 IYL L+ Sbjct: 196 IYLMLT 201 >gi|33599319|ref|NP_886879.1| glutamate/aspartate transport system permease protein [Bordetella bronchiseptica RB50] gi|33575365|emb|CAE30828.1| glutamate/aspartate transport system permease protein [Bordetella bronchiseptica RB50] Length = 252 Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 47/137 (34%), Positives = 81/137 (59%), Gaps = 2/137 (1%) Query: 264 PE--FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321 PE F + +++ Y +A I E +R+G+ A+P GQ +A +ALGLT + R VLLP A+R Sbjct: 104 PEGSFYTAALSIGVYMSARIGEQLRAGIEALPPGQRQAGLALGLTLPQLYRHVLLPNALR 163 Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 ++P +TS LN +KN+S+A+ +G ADL + + + Q E L YL+L++++ Sbjct: 164 MVLPTMTSDCLNTIKNTSVALTIGLADLTAQAHAMQEYSFQVFEAFLTATVAYLALNLIV 223 Query: 382 ALFMNRLNAKIALKEKK 398 + M L +++ + Sbjct: 224 IVAMRALERWVSIPGQS 240 Score = 36.6 bits (83), Expect = 6.4, Method: Compositional matrix adjust. Identities = 25/59 (42%), Positives = 31/59 (52%), Gaps = 2/59 (3%) Query: 114 VGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLP--IPDHSIVLPFGMF 170 VG R LV + VYVEVFRNIP +V +F Y + +LP + D LP G F Sbjct: 50 VGVARTLPYPLVKRLAAVYVEVFRNIPLIVQMFLWYFVLPELLPKALGDWIKQLPEGSF 108 >gi|33595039|ref|NP_882682.1| glutamate/aspartate transport system permease protein [Bordetella parapertussis 12822] gi|33565116|emb|CAE35911.1| glutamate/aspartate transport system permease protein [Bordetella parapertussis] Length = 252 Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 47/133 (35%), Positives = 80/133 (60%), Gaps = 2/133 (1%) Query: 264 PE--FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321 PE F + +++ Y +A I E +R+G+ A+P GQ +A +ALGLT + R VLLP A+R Sbjct: 104 PEGSFYTAALSIGVYMSARIGEQLRAGIEALPPGQRQAGLALGLTLPQLYRHVLLPNALR 163 Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 ++P +TS LN +KN+S+A+ +G ADL + + + Q E L YL+L++++ Sbjct: 164 MVLPTMTSDCLNTIKNTSVALTIGLADLTAQAHAMQEYSFQVFEAFLTATVAYLALNLIV 223 Query: 382 ALFMNRLNAKIAL 394 + M L +++ Sbjct: 224 IVAMRALERWVSI 236 Score = 37.0 bits (84), Expect = 5.4, Method: Compositional matrix adjust. Identities = 25/59 (42%), Positives = 31/59 (52%), Gaps = 2/59 (3%) Query: 114 VGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLP--IPDHSIVLPFGMF 170 VG R LV + VYVEVFRNIP +V +F Y + +LP + D LP G F Sbjct: 50 VGVARTLPYSLVKRLAAVYVEVFRNIPLIVQMFLWYFVLPELLPKALGDWIKQLPEGSF 108 >gi|332040836|gb|EGI77208.1| polar amino acid ABC transporter inner membrane protein [Hylemonella gracilis ATCC 19624] Length = 217 Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 54/161 (33%), Positives = 87/161 (54%), Gaps = 7/161 (4%) Query: 238 IALKYQLHFDKPVLGQ-----FNF-IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291 +A+ Q+ P+L Q F F + G SP + + +AL+ YT+AF+ EI R + A Sbjct: 53 VAVYVQVFQGTPLLMQLFLTYFGFALLGLQTSP-WTAAGLALTLYTSAFLTEIWRGCVAA 111 Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 +P+GQ EAA +L ++ + R V+LPQA+R IPP + ++K ++LA +GF +L Sbjct: 112 IPKGQWEAAQSLAMSFTEQLRHVILPQALRIAIPPTVGFLVQVVKGTALASVIGFVELTR 171 Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 G I N T Q + +Y +L I+L+ L K+ Sbjct: 172 AGNMISNVTYQPFTVFACVALLYFALCWPISLYAQTLERKL 212 >gi|270290755|ref|ZP_06196979.1| polar amino acid transport system permease [Pediococcus acidilactici 7_4] gi|270280815|gb|EFA26649.1| polar amino acid transport system permease [Pediococcus acidilactici 7_4] Length = 217 Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 56/186 (30%), Positives = 96/186 (51%), Gaps = 30/186 (16%) Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPT 234 +T++ + +FS+VLG +L L R+ G + LPLL + F+ FGLP Sbjct: 22 ITIEVSVISIIFSYVLGGILGLIRYLNVRYLSALVGVVIDVIRNLPLLLMFFFVYFGLPN 81 Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294 L + + + S +AL+ + +A IAEI+R G++++ + Sbjct: 82 LGI---------------RLGILPSSI---------LALTVFESAMIAEIIRGGIVSIDK 117 Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354 GQME A A GL++ +A R ++LPQA +IP L SQ+++L+K++SLA + +++ Sbjct: 118 GQMEGARANGLSYWQAMRYIILPQAQVRMIPALVSQFISLIKDTSLATIIMLPEMMYHAQ 177 Query: 355 TIINQT 360 I Q Sbjct: 178 IIYGQN 183 >gi|290893601|ref|ZP_06556583.1| His/Glu/Gln/Arg/opine ABC transporter permease [Listeria monocytogenes FSL J2-071] gi|290556803|gb|EFD90335.1| His/Glu/Gln/Arg/opine ABC transporter permease [Listeria monocytogenes FSL J2-071] Length = 486 Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 38/91 (41%), Positives = 67/91 (73%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+S IALS +AA++AEI+R+G+ AV +GQMEAA +LG+T + R ++LPQA+++I+P Sbjct: 356 FVSGCIALSLNSAAYVAEIIRAGISAVNKGQMEAARSLGMTQGASMRYIILPQAVKNILP 415 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356 L ++++ ++K SS+ +G +L+ + G + Sbjct: 416 ALGNEFVTVIKESSIVSVIGVTELMFMTGVV 446 >gi|271963750|ref|YP_003337946.1| binding-protein-dependent transporter inner membrane component [Streptosporangium roseum DSM 43021] gi|270506925|gb|ACZ85203.1| binding-protein-dependent transport systems inner membrane component [Streptosporangium roseum DSM 43021] Length = 222 Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 42/94 (44%), Positives = 62/94 (65%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I LS YTAAF+ E +R+G+ VP GQ EAA A+GLT + RL++LPQA+R++I PL S Sbjct: 96 IGLSGYTAAFVCEAIRAGINTVPLGQAEAARAIGLTFFQNLRLIVLPQALRAVIAPLGSV 155 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364 + L+KN+++A A+G + T+ G A+ Sbjct: 156 LIALIKNTTIAAAIGVGEASLTMKTLFESHGDAV 189 >gi|146321226|ref|YP_001200937.1| amino acid ABC transporter, permease protein [Streptococcus suis 98HAH33] gi|253752083|ref|YP_003025224.1| putative amino acid ABC transporter, permease protein [Streptococcus suis SC84] gi|253753908|ref|YP_003027049.1| amino acid ABC transporter, permease protein [Streptococcus suis P1/7] gi|253755217|ref|YP_003028357.1| amino acid ABC transporter, permease protein [Streptococcus suis BM407] gi|145692032|gb|ABP92537.1| amino acid ABC transporter, permease protein [Streptococcus suis 98HAH33] gi|251816372|emb|CAZ52003.1| putative amino acid ABC transporter, permease protein [Streptococcus suis SC84] gi|251817681|emb|CAZ55429.1| putative amino acid ABC transporter, permease protein [Streptococcus suis BM407] gi|251820154|emb|CAR46492.1| putative amino acid ABC transporter, permease protein [Streptococcus suis P1/7] gi|292558666|gb|ADE31667.1| ABC transporter membrane-spanning permease - glutamine transport [Streptococcus suis GZ1] gi|319758450|gb|ADV70392.1| amino acid ABC transporter, permease protein [Streptococcus suis JS14] Length = 232 Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 41/121 (33%), Positives = 71/121 (58%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I + Y A+IAE++R+G+ AVP GQ EAA++ G T + R+++LPQA+ +I+PPLT+Q Sbjct: 105 ICVGLYHGAYIAEVIRAGIEAVPTGQTEAALSQGFTQSETMRIIILPQAIPTILPPLTNQ 164 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 +NL+KN++ + AD++ + + I F+Y + +A + R+ Sbjct: 165 VVNLIKNTATVAIISGADIMFMTKSWSAMNANYIPAFAGAAFLYFIMCFPVASWGRRIEE 224 Query: 391 K 391 K Sbjct: 225 K 225 Score = 37.0 bits (84), Expect = 5.9, Method: Compositional matrix adjust. Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 4/75 (5%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151 GF+ T ++ I A +G + G+ S NK++ I RVYVE ++N P LV +Y Sbjct: 27 GFLFTLAISVGAFIMAMFLGIVFGSLSSSKNKVLKIIARVYVEYYQNTPLLVQFMIVYYG 86 Query: 152 VLSVLPIPDHSIVLP 166 LP+ + +++P Sbjct: 87 ----LPLISNYVLMP 97 >gi|254826861|ref|ZP_05231548.1| his/Glu/Gln/Arg/opine ABC transporter permease [Listeria monocytogenes FSL N3-165] gi|258599240|gb|EEW12565.1| his/Glu/Gln/Arg/opine ABC transporter permease [Listeria monocytogenes FSL N3-165] Length = 486 Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 38/91 (41%), Positives = 67/91 (73%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+S IALS +AA++AEI+R+G+ AV +GQMEAA +LG+T + R ++LPQA+++I+P Sbjct: 356 FVSGCIALSLNSAAYVAEIIRAGISAVNKGQMEAARSLGMTQGASMRYIILPQAVKNILP 415 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356 L ++++ ++K SS+ +G +L+ + G + Sbjct: 416 ALGNEFVTVIKESSIVSVIGVTELMFMTGVV 446 >gi|126649373|ref|ZP_01721614.1| amino acid ABC transporter (permease) [Bacillus sp. B14905] gi|126593698|gb|EAZ87621.1| amino acid ABC transporter (permease) [Bacillus sp. B14905] Length = 252 Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 43/106 (40%), Positives = 69/106 (65%), Gaps = 2/106 (1%) Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 L+C AA+ AEI R+G+ ++ +GQMEAA +LGLTH +A R V+LPQA R +IPPL ++++ Sbjct: 120 LNC--AAYNAEIFRAGIQSIAKGQMEAARSLGLTHNQAMRKVILPQAFRRMIPPLGNEFI 177 Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378 LLK+SSL + D++ + + + E ++ +YL L+ Sbjct: 178 ALLKDSSLVTVIAAPDILYASKVVAGASFRFWEPYIVAALLYLILT 223 >gi|120612708|ref|YP_972386.1| polar amino acid ABC transporter inner membrane subunit [Acidovorax citrulli AAC00-1] gi|120591172|gb|ABM34612.1| amino acid ABC transporter membrane protein 2, PAAT family [Acidovorax citrulli AAC00-1] Length = 230 Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 46/136 (33%), Positives = 83/136 (61%), Gaps = 1/136 (0%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 GS+ E +S I + AA+ +EI+R+G+ ++PRGQ+ A ALG+T+ + ++V+LPQ Sbjct: 94 GSSYRSE-LSAIITFIAFEAAYFSEIMRAGIQSIPRGQVFAGQALGMTYGQNMKIVILPQ 152 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378 A R+++P L +Q + L +++SL A+G D++ T G+ IE L+ +Y + Sbjct: 153 AFRNMLPVLLTQTIILFQDTSLVYAIGAYDMLKGFETAGKNYGRPIEAYLLAAVVYFMMC 212 Query: 379 IMIALFMNRLNAKIAL 394 ++ + RL+ KIA+ Sbjct: 213 FALSWAVKRLHRKIAI 228 >gi|302024083|ref|ZP_07249294.1| amino acid ABC transporter, permease protein [Streptococcus suis 05HAS68] Length = 232 Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 41/121 (33%), Positives = 71/121 (58%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I + Y A+IAE++R+G+ AVP GQ EAA++ G T + R+++LPQA+ +I+PPLT+Q Sbjct: 105 ICVGLYHGAYIAEVIRAGIEAVPTGQTEAALSQGFTQSETMRIIILPQAIPTILPPLTNQ 164 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 +NL+KN++ + AD++ + + I F+Y + +A + R+ Sbjct: 165 VVNLIKNTATVAIISGADIMFMTKSWSAMNANYIPAFAGAAFLYFIMCFPVASWGRRIEE 224 Query: 391 K 391 K Sbjct: 225 K 225 Score = 36.2 bits (82), Expect = 8.5, Method: Compositional matrix adjust. Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 4/75 (5%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151 GF+ T ++ I A +G + G+ S NK++ I RVYVE ++N P LV +Y Sbjct: 27 GFLFTLAISVGAFIMAMFLGIVFGSLSSSINKVLKIIARVYVEYYQNTPLLVQFMIVYYG 86 Query: 152 VLSVLPIPDHSIVLP 166 LP+ + +++P Sbjct: 87 ----LPLISNYVLMP 97 >gi|254471177|ref|ZP_05084579.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Pseudovibrio sp. JE062] gi|211959323|gb|EEA94521.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Pseudovibrio sp. JE062] Length = 324 Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 48/128 (37%), Positives = 73/128 (57%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IALS A++ EI RSG+ ++ GQ EAA ALGL R V+LPQAMR I+PP +Q Sbjct: 197 IALSLVYGAYMTEIFRSGIQSISVGQWEAADALGLQRLLTFRKVILPQAMRVIVPPTGNQ 256 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++ +LK+SSL VG D++ + T + +E+++ IY +S+M+ R+ Sbjct: 257 FIAMLKDSSLVSVVGVWDIMFIARTQGRSDFKILEMLITASIIYWVMSVMLEFVQQRIEN 316 Query: 391 KIALKEKK 398 A K+ Sbjct: 317 HYAKSLKR 324 >gi|183602519|ref|ZP_02963884.1| permease protein of ABC transporter system [Bifidobacterium animalis subsp. lactis HN019] gi|219683563|ref|YP_002469946.1| permease protein of ABC transporter system [Bifidobacterium animalis subsp. lactis AD011] gi|241190593|ref|YP_002967987.1| ABC transporter permease [Bifidobacterium animalis subsp. lactis Bl-04] gi|241195999|ref|YP_002969554.1| ABC transporter permease [Bifidobacterium animalis subsp. lactis DSM 10140] gi|183218160|gb|EDT88806.1| permease protein of ABC transporter system [Bifidobacterium animalis subsp. lactis HN019] gi|219621213|gb|ACL29370.1| permease protein of ABC transporter system [Bifidobacterium animalis subsp. lactis AD011] gi|240248985|gb|ACS45925.1| permease protein of ABC transporter system [Bifidobacterium animalis subsp. lactis Bl-04] gi|240250553|gb|ACS47492.1| permease protein of ABC transporter system [Bifidobacterium animalis subsp. lactis DSM 10140] gi|295793580|gb|ADG33115.1| permease protein of ABC transporter system [Bifidobacterium animalis subsp. lactis V9] Length = 328 Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 51/124 (41%), Positives = 72/124 (58%), Gaps = 1/124 (0%) Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312 +F I + F + +I L+ AA++AEIVR+GL AV GQ EAA ALG+ R Sbjct: 145 EFWSIDSQAIITAFNAAWIGLALNEAAYLAEIVRAGLDAVDPGQEEAAKALGMKRSMIMR 204 Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA-DLVSVGGTIINQTGQAIEIILIWM 371 V+LPQAMR IIPP ++ + +LK +SL +AV F DL I N+ + I ++L+ Sbjct: 205 RVILPQAMRIIIPPTGNETIGMLKTTSLVLAVPFTLDLQYATNAIANRIYKPIPLLLVAS 264 Query: 372 FIYL 375 YL Sbjct: 265 IWYL 268 >gi|300763939|ref|ZP_07073935.1| His/Glu/Gln/Arg/opine family amino acid ABC transporter [Listeria monocytogenes FSL N1-017] gi|300515280|gb|EFK42331.1| His/Glu/Gln/Arg/opine family amino acid ABC transporter [Listeria monocytogenes FSL N1-017] Length = 486 Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 38/91 (41%), Positives = 67/91 (73%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+S IALS +AA++AEI+R+G+ AV +GQMEAA +LG+T + R ++LPQA+++I+P Sbjct: 356 FVSGCIALSLNSAAYVAEIIRAGISAVNKGQMEAARSLGMTQGASMRYIILPQAVKNILP 415 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356 L ++++ ++K SS+ +G +L+ + G + Sbjct: 416 ALGNEFVTVIKESSIVSVIGVTELMFMTGVV 446 >gi|46908483|ref|YP_014872.1| His/Glu/Gln/Arg/opine ABC transporter permease [Listeria monocytogenes str. 4b F2365] gi|226224858|ref|YP_002758965.1| amino acid ABC transporter, permease protein [Listeria monocytogenes Clip81459] gi|254825186|ref|ZP_05230187.1| his/Glu/Gln/Arg/opine ABC transporter permease [Listeria monocytogenes FSL J1-194] gi|254931637|ref|ZP_05264996.1| his/Glu/Gln/Arg/opine ABC transporter permease [Listeria monocytogenes HPB2262] gi|254992059|ref|ZP_05274249.1| amino acid ABC transporter, permease protein [Listeria monocytogenes FSL J2-064] gi|255519729|ref|ZP_05386966.1| amino acid ABC transporter, permease protein [Listeria monocytogenes FSL J1-175] gi|46881754|gb|AAT05049.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Listeria monocytogenes serotype 4b str. F2365] gi|225877320|emb|CAS06034.1| Putative amino acid ABC transporter, permease protein [Listeria monocytogenes serotype 4b str. CLIP 80459] gi|293583191|gb|EFF95223.1| his/Glu/Gln/Arg/opine ABC transporter permease [Listeria monocytogenes HPB2262] gi|293594430|gb|EFG02191.1| his/Glu/Gln/Arg/opine ABC transporter permease [Listeria monocytogenes FSL J1-194] gi|328465831|gb|EGF37019.1| amino acid ABC transporter, permease protein [Listeria monocytogenes 1816] gi|328472142|gb|EGF43017.1| amino acid ABC transporter, permease protein [Listeria monocytogenes 220] Length = 486 Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 38/91 (41%), Positives = 67/91 (73%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+S IALS +AA++AEI+R+G+ AV +GQMEAA +LG+T + R ++LPQA+++I+P Sbjct: 356 FVSGCIALSLNSAAYVAEIIRAGISAVNKGQMEAARSLGMTQGASMRYIILPQAVKNILP 415 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356 L ++++ ++K SS+ +G +L+ + G + Sbjct: 416 ALGNEFVTVIKESSIVSVIGVTELMFMTGVV 446 >gi|332179314|gb|AEE15003.1| polar amino acid ABC transporter, inner membrane subunit [Thermodesulfobium narugense DSM 14796] Length = 216 Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 40/113 (35%), Positives = 70/113 (61%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P + +A++ +T A IAEIVR GL ++ +GQ EAA + G ++ + ++LPQA+R + Sbjct: 80 PPIQAAILAMTIFTTAMIAEIVRGGLNSIDKGQWEAAASQGFSYTQTLIYIVLPQAIRKV 139 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376 IPPL SQ++ +K++S AVG +L G I+ Q + ++ +++ I L+ Sbjct: 140 IPPLISQFITTIKDTSFTWAVGIEELTGRGMIIMGQYAEPAQVFVLFGMIALT 192 >gi|313607306|gb|EFR83728.1| His/Glu/Gln/Arg/opine ABC transporter permease [Listeria monocytogenes FSL F2-208] Length = 486 Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 38/91 (41%), Positives = 67/91 (73%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+S IALS +AA++AEI+R+G+ AV +GQMEAA +LG+T + R ++LPQA+++I+P Sbjct: 356 FVSGCIALSLNSAAYVAEIIRAGISAVNKGQMEAARSLGMTQGASMRYIILPQAVKNILP 415 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356 L ++++ ++K SS+ +G +L+ + G + Sbjct: 416 ALGNEFVTVIKESSIVSVIGVTELMFMTGVV 446 >gi|254899048|ref|ZP_05258972.1| hypothetical protein LmonJ_04529 [Listeria monocytogenes J0161] gi|254912811|ref|ZP_05262823.1| conserved hypothetical protein [Listeria monocytogenes J2818] gi|254937138|ref|ZP_05268835.1| arpJ [Listeria monocytogenes F6900] gi|284802697|ref|YP_003414562.1| hypothetical protein LM5578_2453 [Listeria monocytogenes 08-5578] gi|284995839|ref|YP_003417607.1| hypothetical protein LM5923_2404 [Listeria monocytogenes 08-5923] gi|258609741|gb|EEW22349.1| arpJ [Listeria monocytogenes F6900] gi|284058259|gb|ADB69200.1| hypothetical protein LM5578_2453 [Listeria monocytogenes 08-5578] gi|284061306|gb|ADB72245.1| hypothetical protein LM5923_2404 [Listeria monocytogenes 08-5923] gi|293590807|gb|EFF99141.1| conserved hypothetical protein [Listeria monocytogenes J2818] Length = 486 Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 38/91 (41%), Positives = 67/91 (73%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+S IALS +AA++AEI+R+G+ AV +GQMEAA +LG+T + R ++LPQA+++I+P Sbjct: 356 FVSGCIALSLNSAAYVAEIIRAGISAVNKGQMEAARSLGMTQGASMRYIILPQAVKNILP 415 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356 L ++++ ++K SS+ +G +L+ + G + Sbjct: 416 ALGNEFVTVIKESSIVSVIGVTELMFMTGVV 446 >gi|314935665|ref|ZP_07843017.1| amino acid ABC transporter, permease protein [Staphylococcus hominis subsp. hominis C80] gi|313656230|gb|EFS19970.1| amino acid ABC transporter, permease protein [Staphylococcus hominis subsp. hominis C80] Length = 241 Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 52/155 (33%), Positives = 94/155 (60%), Gaps = 10/155 (6%) Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248 I + +F+LG++++LF T L R K + + +Y+S +I G P +V + + + + Sbjct: 36 ITIVTFILGLIIALF-TALMRISSSKVSRGIARVYVS--IIRGTPMIVQL---FIIFYGI 89 Query: 249 PVLGQF---NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305 P LG+ N T+S +S I LS A+ +EI+R G+I++P+GQ EAA ++G+ Sbjct: 90 PELGRLITGNADEQWTLS-SVVSAIIGLSLNVGAYASEIIRGGIISIPKGQTEAAYSIGM 148 Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340 +R+ + ++LPQA+R +P L + +L L+K++SL Sbjct: 149 NYRQTIQRIILPQAIRVSVPALGNTFLGLIKDTSL 183 >gi|224498994|ref|ZP_03667343.1| hypothetical protein LmonF1_04543 [Listeria monocytogenes Finland 1988] gi|254831313|ref|ZP_05235968.1| hypothetical protein Lmon1_08142 [Listeria monocytogenes 10403S] Length = 486 Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 38/91 (41%), Positives = 67/91 (73%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+S IALS +AA++AEI+R+G+ AV +GQMEAA +LG+T + R ++LPQA+++I+P Sbjct: 356 FVSGCIALSLNSAAYVAEIIRAGISAVNKGQMEAARSLGMTQGASMRYIILPQAVKNILP 415 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356 L ++++ ++K SS+ +G +L+ + G + Sbjct: 416 ALGNEFVTVIKESSIVSVIGVTELMFMTGVV 446 >gi|16804289|ref|NP_465774.1| hypothetical protein lmo2250 [Listeria monocytogenes EGD-e] gi|224500950|ref|ZP_03669257.1| hypothetical protein LmonFR_00275 [Listeria monocytogenes FSL R2-561] gi|16411720|emb|CAD00328.1| arpJ [Listeria monocytogenes EGD-e] Length = 486 Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 38/91 (41%), Positives = 67/91 (73%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+S IALS +AA++AEI+R+G+ AV +GQMEAA +LG+T + R ++LPQA+++I+P Sbjct: 356 FVSGCIALSLNSAAYVAEIIRAGISAVNKGQMEAARSLGMTQGASMRYIILPQAVKNILP 415 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356 L ++++ ++K SS+ +G +L+ + G + Sbjct: 416 ALGNEFVTVIKESSIVSVIGVTELMFMTGVV 446 >gi|310658910|ref|YP_003936631.1| ABC transporter permease [Clostridium sticklandii DSM 519] gi|308825688|emb|CBH21726.1| putative transporter subunit: permease component of ABC superfamily transporter [Clostridium sticklandii] Length = 212 Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 44/115 (38%), Positives = 75/115 (65%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P F++ IA+S ++A+IAEI+R+G++AV +GQ EA +LG+T A + V+LPQA ++I Sbjct: 80 PMFVAGVIAMSINSSAYIAEIIRAGIMAVDKGQFEATKSLGMTGAMAYKEVILPQAFKNI 139 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378 +P L ++++ L+K S++ +G DL+ TI T + E +L+ IY L+ Sbjct: 140 LPALGNEFIVLIKESAIVSVIGLHDLMYNVDTIRGITYKPFEPLLVAALIYFILT 194 >gi|307244562|ref|ZP_07526667.1| ABC transporter, permease protein [Peptostreptococcus stomatis DSM 17678] gi|306492089|gb|EFM64137.1| ABC transporter, permease protein [Peptostreptococcus stomatis DSM 17678] Length = 224 Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 43/130 (33%), Positives = 83/130 (63%), Gaps = 4/130 (3%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + +A+ + A+IAEI+RSG+ +V +GQMEA+ +LGLT+ ++ R +++PQA+++I+P Sbjct: 94 FTAAVMAMILNSGAYIAEILRSGISSVDKGQMEASRSLGLTYLQSMRYIIVPQAVKNILP 153 Query: 326 PLTSQYLNLLKNSSLAVAVGFADL----VSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 L +++++L+K S++ VG D+ +SV + N G + LI+ I +LS ++ Sbjct: 154 ALANEFISLVKESAIVAFVGVTDIMFVAISVKNSTYNGFGPYLFAALIYFVITFTLSKLV 213 Query: 382 ALFMNRLNAK 391 L ++ + Sbjct: 214 GLLEKKMTVE 223 >gi|255262995|ref|ZP_05342337.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Thalassiobium sp. R2A62] gi|255105330|gb|EET48004.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Thalassiobium sp. R2A62] Length = 267 Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 38/121 (31%), Positives = 81/121 (66%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + L + +A I+EI R+G+ +V +GQ EAA ++G++ +A R ++LPQ++R ++PPL + Sbjct: 144 LTLGVFHSALISEIFRAGINSVDKGQWEAAASIGMSRGQAYRYIILPQSVRFMLPPLFGE 203 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 +++L+K+S++ + A+L ++G II+ T + EI +YL+L+++++ ++ L Sbjct: 204 FVHLIKSSAIVSVIAVAELTTIGRNIISDTYMSFEIWFTIAAVYLALTLVLSFGVSALER 263 Query: 391 K 391 + Sbjct: 264 R 264 >gi|222151827|ref|YP_002560987.1| glutamine-binding periplasmic protein homolog [Macrococcus caseolyticus JCSC5402] gi|222120956|dbj|BAH18291.1| glutamine-binding periplasmic protein homolog [Macrococcus caseolyticus JCSC5402] Length = 483 Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 43/131 (32%), Positives = 80/131 (61%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+ IAL AA+IAEI+R+G+ AV +GQMEAA +LGL+H +A V++PQA++ I+P Sbjct: 353 FICGAIALVINCAAYIAEIIRAGIKAVDKGQMEAARSLGLSHSQAMNKVIMPQAIKKILP 412 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 L ++++ ++K SS+ +G ++L+ + + +LI +Y L+ ++ M Sbjct: 413 ALGNEFITVIKESSIVSVIGVSELMFNAQVVQGASFDPFTPLLIAAVVYFILTFGLSRVM 472 Query: 386 NRLNAKIALKE 396 N ++++ + Sbjct: 473 NVFERRMSVSD 483 >gi|29833088|ref|NP_827722.1| ABC transporter permease [Streptomyces avermitilis MA-4680] gi|29610210|dbj|BAC74257.1| putative polar amino acid ABC transporter ATP-binding protein [Streptomyces avermitilis MA-4680] Length = 281 Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 65/199 (32%), Positives = 109/199 (54%), Gaps = 19/199 (9%) Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233 RGL LT+ A + V F LG +L+ A RLS + +++ Y+ +L +P Sbjct: 68 RGL---WLTLWLTAVVMVLGFALGTLLA--AGRLSAN---PVLRSVSWGYV--WLFRSMP 117 Query: 234 TLVLIALKYQLHFDKP-VLG--QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290 LV + L + + P +LG N +G TV+ + L+ + AA+ AE+VR G++ Sbjct: 118 ILVQLLLWFNIGALYPQILGVKTVNLLGPVTVA------IVGLTLHEAAYAAEVVRGGIL 171 Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 +V RGQ+EAA ALGL+ + ++LPQAMRSI+PP + + LK +S+ + DL+ Sbjct: 172 SVDRGQIEAAQALGLSRWRRWWRIVLPQAMRSIVPPAGNMLIGTLKGTSIVSVIAVQDLL 231 Query: 351 SVGGTIINQTGQAIEIILI 369 + ++T Q I ++++ Sbjct: 232 YSVQLVYHRTYQVIPLLMV 250 Score = 40.0 bits (92), Expect = 0.61, Method: Compositional matrix adjust. Identities = 28/81 (34%), Positives = 43/81 (53%), Gaps = 6/81 (7%) Query: 81 SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140 +D + ++L G T WL M+ +GTL+ AGRLSAN ++ + YV +FR++P Sbjct: 58 ADYFTSASVLRGLWLTLWLTAVVMVLGFALGTLLAAGRLSANPVLRSVSWGYVWLFRSMP 117 Query: 141 PLVVIFF------LYKSVLSV 155 LV + LY +L V Sbjct: 118 ILVQLLLWFNIGALYPQILGV 138 >gi|51891627|ref|YP_074318.1| amino acid ABC transporter permease protein [Symbiobacterium thermophilum IAM 14863] gi|51855316|dbj|BAD39474.1| amino acid ABC transporter permease protein [Symbiobacterium thermophilum IAM 14863] Length = 229 Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 56/189 (29%), Positives = 94/189 (49%), Gaps = 25/189 (13%) Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQL--HFD----KPVLGQFNFIGGSTVSPEFM 267 ++G+A+ LY+S LI P + + Y L HFD P +G Sbjct: 53 RSGRAVSRLYVS--LIQNTPLVTQVFFLYYLLPHFDIMLPTPAVG--------------- 95 Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327 + L Y A++ E+VR+G+ A+ RGQ+EAA++ G T+ +A R ++LPQA + ++PP+ Sbjct: 96 --VLGLGVYHGAYMTEVVRAGIQAIHRGQLEAALSQGFTYVQAMRHIILPQATQIVLPPM 153 Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387 T+Q + L+KNSS+ + DL+ + TG L IY ++ +A R Sbjct: 154 TNQAVALIKNSSILAMISGGDLMFQADSWSASTGYYGPAYLTVWAIYFAICFPLAQLARR 213 Query: 388 LNAKIALKE 396 ++ L Sbjct: 214 WEERVRLSR 222 >gi|172065440|ref|YP_001816152.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria MC40-6] gi|171997682|gb|ACB68599.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria MC40-6] Length = 297 Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 66/225 (29%), Positives = 116/225 (51%), Gaps = 10/225 (4%) Query: 168 GMFLNNRGLSFPTLTMDTNAKIF-VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226 G FL R + LT N + V + LG+VL + T + R A+ YI Sbjct: 66 GQFLTARSI----LTGLGNTIVMTVLAMTLGVVLGVV-TAVMRLSSNPVLGAIAQGYI-- 118 Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVS--PEFMSLYIALSCYTAAFIAEI 284 +L G P ++ + L + L P LG TV F++ + L A+ +E+ Sbjct: 119 WLFRGTPVILQLLLWFNLALVFPTLGIPGIAEYRTVDVMTPFLAAVLGLGINQGAYTSEV 178 Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344 VR+GL++V GQ EAA ++G+ +A R ++LPQAMR I+PP+ ++ + ++K +SLA V Sbjct: 179 VRAGLLSVDTGQYEAAKSIGMARLQALRRIILPQAMRVIVPPIGNELIGMVKLTSLASVV 238 Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 +A+++ I + IE++++ YL++ +++L R+ Sbjct: 239 QYAEMLHNAQNIYYANARVIELLIVAGIWYLAVVTVLSLAQARVE 283 >gi|260904717|ref|ZP_05913039.1| polar amino acid ABC transporter, inner membrane subunit [Brevibacterium linens BL2] Length = 220 Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 55/133 (41%), Positives = 74/133 (55%), Gaps = 20/133 (15%) Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVS-PEFMSLYIALSCYTA 278 PL + F FGLP L + F GST S F+ +AL+ YTA Sbjct: 61 PLTLVMFFCAFGLPFL-------DIRF------------GSTSSFNSFIYATLALTAYTA 101 Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338 F+AE +RSG+ +P GQ EAA A+GLT + V+LPQA R++IPPL S + LLKN+ Sbjct: 102 CFVAETLRSGISTIPVGQAEAARAVGLTFGQTLSQVILPQAFRTVIPPLGSVIIALLKNT 161 Query: 339 SLAVAVGFADLVS 351 S+A A +L+S Sbjct: 162 SIASAFNNRELIS 174 >gi|59713573|ref|YP_206348.1| amino acid ABC transporter permease protein [Vibrio fischeri ES114] gi|59481821|gb|AAW87460.1| amino acid ABC transporter permease protein [Vibrio fischeri ES114] Length = 286 Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 54/145 (37%), Positives = 81/145 (55%), Gaps = 4/145 (2%) Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291 +P L L L + D +L QF F G + + + + + +AA+I E+VRSGL A Sbjct: 128 VPLLGLENLLREHSGDINLLQQFLF-GSANLWENLTAGVLCIGMISAAYIGEVVRSGLDA 186 Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 +P+GQ EAA LGL+ R ++ PQ + IIPPL Q ++L+K+SS+ + +L Sbjct: 187 IPKGQHEAAKTLGLSTWHRYRYIIAPQVFKVIIPPLAGQCISLVKDSSIISLISIQELTF 246 Query: 352 VGGTIINQTGQAIEIILIWMFIYLS 376 VG I N +G E IW+F+ LS Sbjct: 247 VGTEIANSSGMIFE---IWIFVALS 268 Score = 41.2 bits (95), Expect = 0.28, Method: Compositional matrix adjust. Identities = 26/70 (37%), Positives = 37/70 (52%), Gaps = 9/70 (12%) Query: 74 QGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYV 133 G +PY D ++T L TFW GM+ A G L+G GR S ++ + Y+ Sbjct: 54 DGSLPYFFDGLFSTLRL-----TFW----GMLFAICFGVLLGLGRRSNFTVIRALSNSYI 104 Query: 134 EVFRNIPPLV 143 ++ RNIPPLV Sbjct: 105 QLIRNIPPLV 114 >gi|70725641|ref|YP_252555.1| hypothetical protein SH0640 [Staphylococcus haemolyticus JCSC1435] gi|68446365|dbj|BAE03949.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435] Length = 241 Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 54/155 (34%), Positives = 95/155 (61%), Gaps = 10/155 (6%) Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248 I + +F+LG++++LF T L R K K + +Y+S +I G P +V + + + + Sbjct: 36 ITIVTFILGLIIALF-TALMRISTSKVLKGIARVYVS--IIRGTPMIVQL---FIIFYGI 89 Query: 249 PVLGQF---NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305 P LG+ N T+S +S I LS A+ +EI+R G+I++P+GQ EAA ++G+ Sbjct: 90 PELGRLVTGNADEQWTLS-SVISAIIGLSLNVGAYASEIIRGGIISIPKGQTEAAYSIGM 148 Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340 +R+ + ++LPQA+R IP L + +L+L+K++SL Sbjct: 149 NYRQTIQRIILPQAIRVSIPALGNTFLSLIKDTSL 183 >gi|167038159|ref|YP_001665737.1| polar amino acid ABC transporter, inner membrane subunit [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|320116568|ref|YP_004186727.1| polar amino acid ABC transporter inner membrane subunit [Thermoanaerobacter brockii subsp. finnii Ako-1] gi|166856993|gb|ABY95401.1| polar amino acid ABC transporter, inner membrane subunit [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|319929659|gb|ADV80344.1| polar amino acid ABC transporter, inner membrane subunit [Thermoanaerobacter brockii subsp. finnii Ako-1] Length = 220 Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 39/86 (45%), Positives = 63/86 (73%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P F + AL+ +AA++AEI+R+G+ AV GQ EAA +LG+TH A R V++PQA+++I Sbjct: 86 PAFTAGVSALAINSAAYVAEIIRAGIQAVDPGQNEAARSLGMTHAMAMRYVIIPQAIKNI 145 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADL 349 +P L ++++ +LK S++ +GFADL Sbjct: 146 LPALGNEFIVMLKESAIISVIGFADL 171 >gi|229174192|ref|ZP_04301727.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus MM3] gi|228609313|gb|EEK66600.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus MM3] Length = 226 Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 42/122 (34%), Positives = 78/122 (63%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I LS AA+++EI+R L AV GQM+A +++G+T+++A R ++ PQA+R +P L + Sbjct: 100 IGLSLNNAAYLSEIIRGSLNAVESGQMDACLSVGMTNKQAMRQIIFPQAIRVAVPSLGNN 159 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++ LLK SSL+ A+G A++++ + Q+ + +E L +Y ++I+I+ +L Sbjct: 160 FVGLLKESSLSFALGVAEILAQAKMLAAQSYRYMESYLAVAIVYWIITIVISWGQKKLEK 219 Query: 391 KI 392 K+ Sbjct: 220 KL 221 >gi|16079799|ref|NP_390623.1| glutamine ABC transporter permease [Bacillus subtilis subsp. subtilis str. 168] gi|221310682|ref|ZP_03592529.1| glutamine ABC transporter (integral membrane protein) [Bacillus subtilis subsp. subtilis str. 168] gi|221315005|ref|ZP_03596810.1| glutamine ABC transporter (integral membrane protein) [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221319926|ref|ZP_03601220.1| glutamine ABC transporter (integral membrane protein) [Bacillus subtilis subsp. subtilis str. JH642] gi|221324207|ref|ZP_03605501.1| glutamine ABC transporter (integral membrane protein) [Bacillus subtilis subsp. subtilis str. SMY] gi|81815728|sp|O34606|GLNP_BACSU RecName: Full=Probable glutamine ABC transporter permease protein glnP gi|2635191|emb|CAB14687.1| glutamine ABC transporter (permease) [Bacillus subtilis subsp. subtilis str. 168] gi|28375455|emb|CAA93320.1| integral membrane protein [Bacillus subtilis subsp. subtilis str. 168] gi|291485152|dbj|BAI86227.1| glutamine ABC transporter, integral membrane protein [Bacillus subtilis subsp. natto BEST195] Length = 218 Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 53/181 (29%), Positives = 98/181 (54%), Gaps = 27/181 (14%) Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273 +T + LPLL I F F LP I +K + I + ++ AL Sbjct: 60 ETIRNLPLLLIIFFTFFALPE---IGIKLE-------------ITAAAIT--------AL 95 Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333 + + +A ++EI+RSGL ++ +GQ+EAA + GL++ + +++PQA+R ++PP+ SQ+++ Sbjct: 96 TIFESAMLSEIIRSGLKSIDKGQIEAARSSGLSYTQTLFFIVMPQALRRMVPPIVSQFIS 155 Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQA---IEIILIWMFIYLSLSIMIALFMNRLNA 390 LLK++SLAV + +L+ I Q+ I L+ +Y +++ ++L RL Sbjct: 156 LLKDTSLAVVIALPELIHNAQIINGQSADGSYFFPIFLLAALMYFAVNYSLSLAARRLEV 215 Query: 391 K 391 + Sbjct: 216 R 216 Score = 36.6 bits (83), Expect = 6.5, Method: Compositional matrix adjust. Identities = 19/58 (32%), Positives = 34/58 (58%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 GF+ T ++AF +I + G + G R + +++ + V VE RN+P L++IFF + Sbjct: 18 GFLVTLYVAFISIILSFFFGLIAGTLRYAKVPVLSQLIAVLVETIRNLPLLLIIFFTF 75 >gi|241762840|ref|ZP_04760903.1| polar amino acid ABC transporter, inner membrane subunit [Acidovorax delafieldii 2AN] gi|241368015|gb|EER62220.1| polar amino acid ABC transporter, inner membrane subunit [Acidovorax delafieldii 2AN] Length = 217 Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 63/227 (27%), Positives = 112/227 (49%), Gaps = 34/227 (14%) Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTG---------KALPLLYISTFLIF 230 T+T+ A V + LG+VL+L RLS HF + + PL+ F+ F Sbjct: 16 TVTLKLFAITLVLAVPLGLVLAL--ARLS-HFKPLSAAVNGYIWLMRGTPLMLQMLFIYF 72 Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290 LP + +I ++ P+F + +A + AA+ AEI R+G+ Sbjct: 73 ALPFVPVIGVRL---------------------PDFPAAVVAFALNYAAYFAEIFRAGIQ 111 Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 +V RGQ EAA LG+ + + R ++LPQ +RSI+PP++++ + L+K++SL + DL+ Sbjct: 112 SVDRGQYEAAKVLGMNYGQTMRRIVLPQMVRSILPPMSNETITLVKDTSLIYVLALNDLL 171 Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 I+ + I+ F YL +++++ RL + A ++ Sbjct: 172 RAARGIVQRDFTTTPFIVAAAF-YLIMTLVLTWGFQRLEKRYAKYDE 217 >gi|322372981|ref|ZP_08047517.1| polar amino acid uptake (PAAT) family ABC transporter, permease protein [Streptococcus sp. C150] gi|321278023|gb|EFX55092.1| polar amino acid uptake (PAAT) family ABC transporter, permease protein [Streptococcus sp. C150] Length = 155 Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 45/130 (34%), Positives = 75/130 (57%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P + +I S +AA++AEI+RS + AV +GQ EAA +LGL + R ++LPQAMR Sbjct: 24 PALLCAFIGFSSVSAAYMAEILRSSISAVDKGQWEAARSLGLPKKSIIRHIILPQAMRIA 83 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 + PL + ++++K+SSLA + D+ I + + + ++ FIY +LS + L Sbjct: 84 VAPLGNVIIDMVKSSSLAAMITVPDIFQNAKIIGGREYDYMSMYILIAFIYWTLSFTLEL 143 Query: 384 FMNRLNAKIA 393 N L ++A Sbjct: 144 LQNHLEKRLA 153 >gi|311898324|dbj|BAJ30732.1| putative amino acid ABC transporter permease protein [Kitasatospora setae KM-6054] Length = 346 Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 67/204 (32%), Positives = 107/204 (52%), Gaps = 14/204 (6%) Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA-- 239 T++ A + V G++L++ RLSR+ +G A LYI ++ G P LV + Sbjct: 72 TLELTALAMLMGVVGGVLLAVM--RLSRN-PVLSGTAW--LYI--WIFRGTPVLVQLVFW 124 Query: 240 -----LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294 L Q+ P F +T+ P F + + L AA++AEIVR+G+ +V Sbjct: 125 NNIGVLWKQISLGVPFGPAFWSQESNTLVPVFTAALLGLGLNEAAYMAEIVRAGIQSVDE 184 Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354 GQ EAA ALG++ A R ++LPQAMR IIPP ++ +++LK +SL + +L + G Sbjct: 185 GQAEAAHALGMSRATALRRIVLPQAMRVIIPPTGNETISMLKTTSLVQVIALVELFTAGH 244 Query: 355 TIINQTGQAIEIILIWMFIYLSLS 378 I +T + I ++ YL L+ Sbjct: 245 DIATRTYKPIPAMIAVSIYYLLLT 268 >gi|86605964|ref|YP_474727.1| polar amino acid ABC transporter permease [Synechococcus sp. JA-3-3Ab] gi|86554506|gb|ABC99464.1| polar amino amino acid ABC transporter (PAAT) family, permease protein [Synechococcus sp. JA-3-3Ab] Length = 401 Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 65/215 (30%), Positives = 109/215 (50%), Gaps = 28/215 (13%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF----GLP-TLVLIALKYQLH 245 + F +G++L+L + +ALP++ I L+ G+P T +L A + Sbjct: 207 IIGFPIGVLLAL----------GRANRALPVIRIFCTLVIELVRGVPLTTILFAAWLLVP 256 Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305 F F+GG +V+ + +A +TA ++AE VR GL ++P GQ+EAA ALGL Sbjct: 257 F---------FLGGISVN-LIIRAEVAFILFTAVYVAEDVRGGLQSIPLGQLEAARALGL 306 Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII---NQTGQ 362 + T LV+LPQA+R+ +P L +++L L K++SL VG DL+ G + N G Sbjct: 307 NPFQVTALVILPQALRAAVPALVNEFLTLFKDTSLVFIVGLIDLLQAGRVVFTNPNWLGT 366 Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 E++ IY +A ++ + L ++ Sbjct: 367 QREVLFFIGLIYFICCFAMAYAAQQVEKALGLGKR 401 >gi|33240124|ref|NP_875066.1| ABC-type amino acid transport system permease component [Prochlorococcus marinus subsp. marinus str. CCMP1375] gi|33237651|gb|AAP99718.1| ABC-type amino acid transport system permease component [Prochlorococcus marinus subsp. marinus str. CCMP1375] Length = 339 Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 44/131 (33%), Positives = 81/131 (61%), Gaps = 3/131 (2%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IA + + +A+IAE +R GL A+P Q+EA A+GL + + T+ ++LPQA+R +P LT+Q Sbjct: 208 IAFTLFVSAYIAEDIRGGLQAIPNTQIEAGKAIGLNNIQITQFIVLPQALRIALPALTNQ 267 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQT---GQAIEIILIWMFIYLSLSIMIALFMNR 387 + LL+N+SL +G +L+ +G +++ G+ IE+ + IY + +++AL Sbjct: 268 AIGLLQNTSLMAILGLVELLGIGRSLLANPEFIGRYIEVYVWLAAIYWLVCMIMALLARN 327 Query: 388 LNAKIALKEKK 398 L K+++ + Sbjct: 328 LEQKLSINRRN 338 >gi|295114882|emb|CBL35729.1| amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [butyrate-producing bacterium SM4/1] Length = 214 Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 43/127 (33%), Positives = 84/127 (66%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +AL +AA+++E++RSG+ AV +GQMEAA +LGL HR+A V+LPQA+++I+P L ++ Sbjct: 88 VALCLNSAAYVSEVIRSGIQAVDKGQMEAARSLGLNHRQAMVKVILPQAIKNIMPALGNE 147 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++ ++K++SLA +L++V T+ ++E ++I IY ++ ++ +N + Sbjct: 148 FVMMIKDTSLASTFFVGELMTVWQTVRGVLYLSLETLIIVGCIYFIVTFSLSKGINFMER 207 Query: 391 KIALKEK 397 ++ E+ Sbjct: 208 RMRANER 214 >gi|220904828|ref|YP_002480140.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219869127|gb|ACL49462.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 249 Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 48/123 (39%), Positives = 72/123 (58%) Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 AL +T A + E VRSG++A+ RGQ A +ALGLT + VLLP A R I PPLTS+ Sbjct: 117 ALGLFTGARVCEQVRSGILALSRGQRYAGLALGLTLPQTYVHVLLPNAYRIITPPLTSEM 176 Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 LN++KN+++A +G +L S ++ +G A E + Y+ L+ ++ M L K Sbjct: 177 LNMVKNTAVASTIGLVELTSQANRLLEFSGFAYESFIAVTLAYVFLNFIVMRAMKMLEKK 236 Query: 392 IAL 394 + L Sbjct: 237 MRL 239 Score = 37.4 bits (85), Expect = 4.1, Method: Compositional matrix adjust. Identities = 31/104 (29%), Positives = 49/104 (47%), Gaps = 12/104 (11%) Query: 54 KSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTL 113 ++N + GI F E+A F + +Y ++ GF+ T L I A I+G+ Sbjct: 2 QANWNWGIFF--EQAPF----------GNVTYLNWLIDGFLTTAALFVCAWIVAFIVGSF 49 Query: 114 VGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLP 157 G R +K + + YV +FRNIP +V F Y + +LP Sbjct: 50 FGILRTLPSKALRTVGATYVAIFRNIPLIVQFFIWYLAAPDLLP 93 >gi|168187335|ref|ZP_02621970.1| amino acid ABC transporter, permease protein [Clostridium botulinum C str. Eklund] gi|169294769|gb|EDS76902.1| amino acid ABC transporter, permease protein [Clostridium botulinum C str. Eklund] Length = 232 Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 61/188 (32%), Positives = 100/188 (53%), Gaps = 23/188 (12%) Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATR-------LSRHFHEKTGKALPLL 222 FLN G++ L++ T +FS +LG + +L +S F E + PLL Sbjct: 15 FLNGAGITI-VLSLIT----VIFSSILGTIFALMKLSKIKILNIISNVFIEIV-RGTPLL 68 Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282 +G+PTL L L Q + +G + I L+ + A++A Sbjct: 69 VQVYIFYYGIPTL--------LQNAGVELPQIDIMGNDFTG--LCMIVITLALNSTAYVA 118 Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342 EI+RSG+ +V +GQMEAA +LGLTH A R V++PQA+++I+P L ++++ ++K SS+ Sbjct: 119 EIIRSGIESVNKGQMEAARSLGLTHGMAMRYVIIPQAIKNILPALGNEFITVIKESSIVS 178 Query: 343 AVGFADLV 350 VG +L+ Sbjct: 179 IVGIKELM 186 >gi|239636041|ref|ZP_04677055.1| L-cystine transport system permease protein TcyB [Staphylococcus warneri L37603] gi|239598312|gb|EEQ80795.1| L-cystine transport system permease protein TcyB [Staphylococcus warneri L37603] Length = 239 Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 53/155 (34%), Positives = 95/155 (61%), Gaps = 10/155 (6%) Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248 I + +FVLG++++LF T L R K K + +Y+S +I G P +V + + + + Sbjct: 34 ITLVTFVLGLIIALF-TALMRISTSKVLKGIARVYVS--IIRGTPMIVQL---FIIFYGI 87 Query: 249 PVLGQF---NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305 P LG+ + T++P ++ I LS A+ +EI+R G+I++P+GQ EAA ++G+ Sbjct: 88 PELGRLLTNDADNQWTLAPVIAAI-IGLSLNVGAYASEIIRGGIISIPKGQTEAAYSIGM 146 Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340 +R+ + ++LPQA+R IP L + +L L+K++SL Sbjct: 147 NYRQTVQRIILPQAIRVSIPALGNTFLGLIKDTSL 181 >gi|229591450|ref|YP_002873569.1| putative amino acid ABC transporter permease [Pseudomonas fluorescens SBW25] gi|229363316|emb|CAY50435.1| putative amino acid ABC transporter, permease protein [Pseudomonas fluorescens SBW25] Length = 233 Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 64/201 (31%), Positives = 108/201 (53%), Gaps = 15/201 (7%) Query: 183 MDTNAKIFVFSFVLGIVL--SLFATRLSRHFHEKTGKALPLLYISTFLIF--GLPTLVLI 238 ++ ++ +F+++L +VL +L RL TG L ++ ++ + +PTLV + Sbjct: 23 IEMTLQLALFAWLLAMVLALTLVTVRL-------TGNKLADRLVAGYVSYHRNVPTLVQL 75 Query: 239 ALKYQLHFDKP-VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQM 297 L Y F P +L + + + + E++ IAL AA+ E +RSGL A+P GQ Sbjct: 76 MLWY---FGVPTLLSESAQLWLANHNTEYLFSVIALGLCQAAYFCEDIRSGLRAIPAGQT 132 Query: 298 EAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII 357 EA+ ALGL + ++ R V+LPQ +R+ +P L + + L KN+SLA+A+G +L + Sbjct: 133 EASRALGLGYVRSMRYVILPQGVRNCLPSLINHTVLLFKNTSLAMAIGVVELTYASREVE 192 Query: 358 NQTGQAIEIILIWMFIYLSLS 378 N T + E L+ YL S Sbjct: 193 NYTFRTFESYLVATVFYLVFS 213 >gi|258611866|ref|ZP_05711691.1| LOW QUALITY PROTEIN: amino acid ABC transporter [Listeria monocytogenes FSL R2-503] gi|258606739|gb|EEW19347.1| LOW QUALITY PROTEIN: amino acid ABC transporter [Listeria monocytogenes FSL R2-503] Length = 444 Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 38/91 (41%), Positives = 67/91 (73%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+S IALS +AA++AEI+R+G+ AV +GQMEAA +LG+T + R ++LPQA+++I+P Sbjct: 314 FVSGCIALSLNSAAYVAEIIRAGISAVNKGQMEAARSLGMTQGASMRYIILPQAVKNILP 373 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356 L ++++ ++K SS+ +G +L+ + G + Sbjct: 374 ALGNEFVTVIKESSIVSVIGVTELMFMTGVV 404 >gi|238854963|ref|ZP_04645293.1| glutamine ABC transporter, permease/substrate-binding protein [Lactobacillus jensenii 269-3] gi|260664248|ref|ZP_05865101.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Lactobacillus jensenii SJ-7A-US] gi|282931674|ref|ZP_06337167.1| probable amino-acid ABC transporter permease protein [Lactobacillus jensenii 208-1] gi|313472443|ref|ZP_07812935.1| amino acid ABC transporter, amino acid-binding/permease protein [Lactobacillus jensenii 1153] gi|238832753|gb|EEQ25060.1| glutamine ABC transporter, permease/substrate-binding protein [Lactobacillus jensenii 269-3] gi|260562134|gb|EEX28103.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Lactobacillus jensenii SJ-7A-US] gi|281304285|gb|EFA96394.1| probable amino-acid ABC transporter permease protein [Lactobacillus jensenii 208-1] gi|313449147|gb|EEQ69141.2| amino acid ABC transporter, amino acid-binding/permease protein [Lactobacillus jensenii 1153] Length = 220 Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 66/220 (30%), Positives = 108/220 (49%), Gaps = 31/220 (14%) Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPT 234 +T++ + V S+++G++L ++ G + LPLL I F FG P Sbjct: 22 VTVEVSIISIVLSYIIGLILGTIRYMKIKYISAVVGLIIDIIRNLPLLLIIFFTYFGFPE 81 Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294 L G +P F + AL + +A +AEIVR G+ AVP Sbjct: 82 L-----------------------GIHATP-FWAAISALVIFESAMLAEIVRGGIKAVPE 117 Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354 GQME A + G+T+ +A V++PQAM ++P L SQ+++L+K++SLA + +L+ Sbjct: 118 GQMEGARSNGMTYLQAMCHVIMPQAMHMMMPALLSQFVSLVKDTSLATIIILPELLYHAQ 177 Query: 355 TIINQ-TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393 I +Q T I + LI +Y + ++LF RL K+ Sbjct: 178 IIYSQNTTYMIPMYLIIATMYFVVCFALSLFAQRLRKKLG 217 >gi|206563062|ref|YP_002233825.1| glutamine ABC transporter permease [Burkholderia cenocepacia J2315] gi|198039102|emb|CAR55065.1| glutamine ABC transporter, permease protein [Burkholderia cenocepacia J2315] Length = 218 Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 61/189 (32%), Positives = 97/189 (51%), Gaps = 17/189 (8%) Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249 V FV+G++ +F R + K L +YI LI G P +V + L+F P Sbjct: 30 LVGGFVVGMIAGMF-----RAYGPKAMNVLAQVYIE--LIRGTPIVVQVMF---LYFALP 79 Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309 +L G + IA++ + A++AE+VR L+++P+G EA +A+GL+ + Sbjct: 80 LLAHIRIDG-------LTAAIIAITVNSGAYLAEVVRGALLSIPKGLTEAGLAMGLSMPR 132 Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369 V+ P A R +IPPL +Q + LK++SL + +G +L G II QA+EI Sbjct: 133 VLLKVVGPLAFRRLIPPLGNQCIVSLKDTSLFIVIGVGELTRKGQEIIAGNFQAVEIWTA 192 Query: 370 WMFIYLSLS 378 IYL L+ Sbjct: 193 VAVIYLLLT 201 Score = 36.6 bits (83), Expect = 7.7, Method: Compositional matrix adjust. Identities = 27/107 (25%), Positives = 52/107 (48%), Gaps = 13/107 (12%) Query: 96 TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSV 155 T ++AF G++ ++G + G R K + + +VY+E+ R P +V + FLY + Sbjct: 22 TVFIAFFGLVGGFVVGMIAGMFRAYGPKAMNVLAQVYIELIRGTPIVVQVMFLYFA---- 77 Query: 156 LPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL 202 LP+ H + GL+ + + N+ ++ V G +LS+ Sbjct: 78 LPLLAH---------IRIDGLTAAIIAITVNSGAYLAEVVRGALLSI 115 >gi|86608410|ref|YP_477172.1| polar amino acid ABC transporter permease [Synechococcus sp. JA-2-3B'a(2-13)] gi|86556952|gb|ABD01909.1| polar amino amino acid ABC transporter (PAAT) family, permease protein [Synechococcus sp. JA-2-3B'a(2-13)] Length = 402 Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 65/215 (30%), Positives = 109/215 (50%), Gaps = 28/215 (13%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF----GLP-TLVLIALKYQLH 245 + F +G++L+L + +ALP++ I L+ G+P T +L A + Sbjct: 208 IIGFPIGVLLAL----------GRANRALPVIRIFCTLVIELVRGVPLTTILFAAWLLVP 257 Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305 F F+GG +V+ + +A +TA ++AE VR GL ++P GQ+EAA ALGL Sbjct: 258 F---------FLGGISVN-LIIRAEVAFILFTAVYVAEDVRGGLQSIPLGQLEAARALGL 307 Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII---NQTGQ 362 + T LV+LPQA+R+ +P L +++L L K++SL VG DL+ G + N G Sbjct: 308 NPFQVTALVILPQALRAAVPALVNEFLTLFKDTSLVFIVGLIDLLQAGRVVFTNPNWLGT 367 Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 E++ IY +A ++ + L ++ Sbjct: 368 QREVLFFIGLIYFICCFAMAYAAQQVEKALGLGKR 402 >gi|312963938|ref|ZP_07778409.1| amino acid ABC transporter, permease protein [Pseudomonas fluorescens WH6] gi|311281973|gb|EFQ60583.1| amino acid ABC transporter, permease protein [Pseudomonas fluorescens WH6] Length = 256 Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 45/119 (37%), Positives = 74/119 (62%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IALS A+++EI R+G++ VP GQ EAA+ALG+ V LPQAMR+IIPP T+Q Sbjct: 127 IALSLNYGAYLSEIFRAGILGVPHGQREAALALGMRDSAIFWHVTLPQAMRTIIPPATNQ 186 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 ++++LK+SSL +G +++ + + + + IE++ IY +S+ + L R+ Sbjct: 187 FISMLKDSSLISVMGVWEVMFLAQSYGRSSYRYIEMLTTAAIIYWVMSLGLELIQARME 245 >gi|288922651|ref|ZP_06416827.1| polar amino acid ABC transporter, inner membrane subunit [Frankia sp. EUN1f] gi|288346009|gb|EFC80362.1| polar amino acid ABC transporter, inner membrane subunit [Frankia sp. EUN1f] Length = 213 Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 49/113 (43%), Positives = 69/113 (61%), Gaps = 1/113 (0%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +AL+ Y AF+ E VR+G+ V GQ EAA ALGLT ++ RLV+LPQA R+++ PL S Sbjct: 86 MALTIYHTAFVCEAVRAGVNGVEVGQAEAARALGLTFSQSLRLVILPQAFRNVVQPLGSV 145 Query: 331 YLNLLKNSSLAVAVGFADLVSVG-GTIINQTGQAIEIILIWMFIYLSLSIMIA 382 L++NSS+A A G +L V G G I I+L + YL L++ +A Sbjct: 146 GSALIRNSSIAAAFGVQELTGVSQGLATANPGDVIAILLAGIVCYLVLTLSLA 198 >gi|121607782|ref|YP_995589.1| polar amino acid ABC transporter inner membrane subunit [Verminephrobacter eiseniae EF01-2] gi|121552422|gb|ABM56571.1| polar amino acid ABC transporter, inner membrane subunit [Verminephrobacter eiseniae EF01-2] Length = 221 Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 63/209 (30%), Positives = 106/209 (50%), Gaps = 14/209 (6%) Query: 189 IFVFSFVL-GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247 +F S VL G+ L L A + H + + + YI F T +L+ L + +++ Sbjct: 26 LFTLSTVLAGVALGLVAGVIRTH-RSRWLRLPAIAYIEAFRC----TPLLVQLVW-IYYA 79 Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307 PVL G +SP M+ ++ L+ Y AF AE+ R G+ AV +GQ EA ALG+ H Sbjct: 80 LPVLS------GVALSP-IMACFLTLTLYAGAFYAEVFRGGIEAVGKGQWEAGGALGMRH 132 Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367 + R ++LPQA+R +IP +Q + LKN+SL + ADL+ G I + +E+ Sbjct: 133 AQTLRSIILPQAVRIMIPSFINQTVMQLKNTSLVSTIAVADLLYQGAVITAAIYRPLEVY 192 Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIALKE 396 + IY ++ + + R+ ++ + Sbjct: 193 TVVAVIYFAVLFPLTVAAQRVETRLGTRR 221 >gi|256396803|ref|YP_003118367.1| polar amino acid ABC transporter inner membrane subunit [Catenulispora acidiphila DSM 44928] gi|256363029|gb|ACU76526.1| polar amino acid ABC transporter, inner membrane subunit [Catenulispora acidiphila DSM 44928] Length = 333 Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 46/141 (32%), Positives = 82/141 (58%) Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302 ++ F P +F + ++ F + +AL AA+++EIVR+G+++V GQ EAA + Sbjct: 146 EVGFGIPFGPEFFHLDTNSTITRFTAAVLALGLNEAAYMSEIVRAGILSVDEGQSEAAAS 205 Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362 LG+ K R ++LPQAMR IIPP ++ +++LK SSLA +G +L + I+ + Sbjct: 206 LGMRRAKIMRRIVLPQAMRVIIPPTGNETISMLKTSSLASVIGVVELTDASESAIHLYFK 265 Query: 363 AIEIILIWMFIYLSLSIMIAL 383 AI ++ YL + ++++ Sbjct: 266 AIPFYVVASLWYLFFTTVLSI 286 >gi|51245288|ref|YP_065172.1| amino acid ABC transporter, permease protein [Desulfotalea psychrophila LSv54] gi|50876325|emb|CAG36165.1| probable amino acid ABC transporter, permease protein [Desulfotalea psychrophila LSv54] Length = 473 Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 41/95 (43%), Positives = 63/95 (66%), Gaps = 6/95 (6%) Query: 264 PEFMSL------YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317 PE MS I ++ + AA+IAE++R GL A+P+GQ EAA ALG T+ K +++LP Sbjct: 331 PENMSFDKLLRALIGVAFFYAAYIAEVIRGGLQAIPKGQYEAAEALGWTYWKKMSVIILP 390 Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352 Q +R +IP L + +L+LLK+++L +G DL+ V Sbjct: 391 QTLRMVIPGLANNFLSLLKDTTLVAVIGLLDLLGV 425 >gi|148543958|ref|YP_001271328.1| polar amino acid ABC transporter, inner membrane subunit [Lactobacillus reuteri DSM 20016] gi|227364871|ref|ZP_03848917.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus reuteri MM2-3] gi|325682504|ref|ZP_08162021.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus reuteri MM4-1A] gi|148530992|gb|ABQ82991.1| amino acid ABC transporter membrane protein, PAAT family / amino acid ABC transporter substrate-binding protein, PAAT family [Lactobacillus reuteri DSM 20016] gi|227070075|gb|EEI08452.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus reuteri MM2-3] gi|324978343|gb|EGC15293.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus reuteri MM4-1A] Length = 503 Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 56/194 (28%), Positives = 104/194 (53%), Gaps = 22/194 (11%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 +F F+LG + +L ++ H ++ + YI + G P +V I Y Sbjct: 316 IFGFLLGTLFALMRLSKNKFLH-----SIAVCYIE--FLRGTPMMVQIMFVY-------- 360 Query: 251 LGQFNFIGGSTVS--PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308 F G+ + P ++ IA+S + A++AEI+RSG+ ++P GQ EAA +LG++ Sbjct: 361 -----FGIGALIQSLPALLAGIIAVSLNSGAYVAEIIRSGIQSIPLGQTEAARSLGMSKN 415 Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368 + R V++PQA+++I P L ++ + LLK+SSL +G ++L+ + + T + + + Sbjct: 416 ETFRYVIMPQALKNIWPALGNELITLLKDSSLVSVIGVSELMYQTQLVQSATYKGVLPLF 475 Query: 369 IWMFIYLSLSIMIA 382 I M IY L+ ++ Sbjct: 476 ITMIIYFILTFTLS 489 >gi|288574423|ref|ZP_06392780.1| polar amino acid ABC transporter, inner membrane subunit [Dethiosulfovibrio peptidovorans DSM 11002] gi|288570164|gb|EFC91721.1| polar amino acid ABC transporter, inner membrane subunit [Dethiosulfovibrio peptidovorans DSM 11002] Length = 217 Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 53/152 (34%), Positives = 86/152 (56%), Gaps = 11/152 (7%) Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286 ++I G P LV + L Y F P LG N P F++ I L ++ ++ EIVR Sbjct: 60 YVIRGTPLLVQLFLIY---FGLPSLG-INL-------PAFVAGIIGLGINSSGYVGEIVR 108 Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346 G+ AVP+GQ EA+ LGL++ K+ R ++LPQA+RS++P + ++++ L+K SSL + Sbjct: 109 GGIEAVPKGQWEASKMLGLSYLKSMRYIILPQAIRSMLPAIGNEFVTLIKESSLLSTLAI 168 Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378 +L G + + T + E + IYL L+ Sbjct: 169 TELTMAGQQVRSVTYASFETFIAVGIIYLCLT 200 >gi|251795092|ref|YP_003009823.1| polar amino acid ABC transporter inner membrane protein [Paenibacillus sp. JDR-2] gi|247542718|gb|ACS99736.1| polar amino acid ABC transporter, inner membrane subunit [Paenibacillus sp. JDR-2] Length = 223 Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 43/112 (38%), Positives = 73/112 (65%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + Y+ L+ + A+IAEI+R+G+ AV +GQMEAA +LG++ A R ++LPQA ++++P Sbjct: 93 FTAAYLTLTVNSGAYIAEIMRAGIQAVDKGQMEAARSLGMSKGLAMRQIILPQAFKNVLP 152 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377 L ++++ ++K SS+ VG+A+L I T +IE +L+ IY L Sbjct: 153 ALGNEFVVVVKESSVLSVVGYAELTYQANAIRGATFISIEPMLVSALIYFVL 204 >gi|194467780|ref|ZP_03073766.1| polar amino acid ABC transporter, inner membrane subunit [Lactobacillus reuteri 100-23] gi|194452633|gb|EDX41531.1| polar amino acid ABC transporter, inner membrane subunit [Lactobacillus reuteri 100-23] Length = 503 Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 56/194 (28%), Positives = 104/194 (53%), Gaps = 22/194 (11%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 +F F+LG + +L ++ H ++ + YI + G P +V I Y Sbjct: 316 IFGFLLGTLFALMRLSKNKFLH-----SIAVCYIE--FLRGTPMMVQIMFVY-------- 360 Query: 251 LGQFNFIGGSTVS--PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308 F G+ + P ++ IA+S + A++AEI+RSG+ ++P GQ EAA +LG++ Sbjct: 361 -----FGIGAIIQSLPALLAGIIAVSLNSGAYVAEIIRSGIQSIPLGQTEAARSLGMSKN 415 Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368 + R V++PQA+++I P L ++ + LLK+SSL +G ++L+ + + T + + + Sbjct: 416 ETFRYVIMPQALKNIWPALGNELITLLKDSSLVSVIGVSELMYQTQLVQSATYKGVLPLF 475 Query: 369 IWMFIYLSLSIMIA 382 I M IY L+ ++ Sbjct: 476 ITMIIYFILTFTLS 489 >gi|84685380|ref|ZP_01013278.1| glutamate/glutamine/aspartate/asparagine ABC transporter, permease protein [Maritimibacter alkaliphilus HTCC2654] gi|84666537|gb|EAQ13009.1| glutamate/glutamine/aspartate/asparagine ABC transporter, permease protein [Rhodobacterales bacterium HTCC2654] Length = 433 Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 38/86 (44%), Positives = 60/86 (69%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I + + +A+IAE++R GL A+PRGQ EAA ALGL + KA RL++LPQA++ IP + S Sbjct: 304 IMATLFASAYIAEVIRGGLAALPRGQYEAADALGLDYWKAQRLIILPQALKISIPGIVST 363 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTI 356 ++ L K+++L +G D + + G+I Sbjct: 364 FIGLFKDTTLVSIIGLLDPIGLTGSI 389 >gi|115361199|ref|YP_778336.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria AMMD] gi|115286527|gb|ABI92002.1| amino acid ABC transporter membrane protein, PAAT family [Burkholderia ambifaria AMMD] Length = 297 Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 66/225 (29%), Positives = 116/225 (51%), Gaps = 10/225 (4%) Query: 168 GMFLNNRGLSFPTLTMDTNAKIF-VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226 G FL R + LT N + V + LG+VL + T + R A+ YI Sbjct: 66 GQFLTARSI----LTGLGNTIVMTVLAMTLGVVLGVV-TAVMRLSSNPVLGAIAHGYI-- 118 Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVS--PEFMSLYIALSCYTAAFIAEI 284 +L G P ++ + L + L P LG TV F++ + L A+ +E+ Sbjct: 119 WLFRGTPVILQLLLWFNLGLVFPTLGIPGIAEYRTVDVMTPFLAAVLGLGINQGAYTSEV 178 Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344 VR+GL++V GQ EAA ++G+ +A R ++LPQAMR I+PP+ ++ + ++K +SLA V Sbjct: 179 VRAGLLSVDTGQYEAAKSIGMARLQALRRIILPQAMRVIVPPIGNELIGMVKLTSLASVV 238 Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 +A+++ I + IE++++ YL++ +++L R+ Sbjct: 239 QYAEMLHNAQNIYYANARVIELLIVAGIWYLAIVTVLSLAQARVE 283 >gi|209546624|ref|YP_002278542.1| polar amino acid ABC transporter inner membrane protein [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209537868|gb|ACI57802.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 251 Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 52/157 (33%), Positives = 89/157 (56%), Gaps = 11/157 (7%) Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290 G+P L+LI Y F P+L G+ V P F+++ L Y +AF++E+VR+G++ Sbjct: 74 GVPLLMLILWSY---FLVPLLT------GADV-PSFVTMLTTLVVYQSAFLSEVVRAGIV 123 Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 A+ GQM+AA ALG H A R ++LPQA+ ++IP + S +++ +K+++L + DL Sbjct: 124 ALGPGQMDAARALGHGHIGAMRYIILPQALYNMIPSILSTFVSTIKDTTLGYVINVPDLT 183 Query: 351 SVGGTIINQ-TGQAIEIILIWMFIYLSLSIMIALFMN 386 + NQ Q ++ LI +Y ++ + F N Sbjct: 184 FAASQVNNQLLTQPFQVFLILAIVYFAICWTLTYFAN 220 >gi|184153353|ref|YP_001841694.1| amino acid ABC transporter substrate binding and permease components [Lactobacillus reuteri JCM 1112] gi|183224697|dbj|BAG25214.1| amino acid ABC transporter substrate binding and permease components [Lactobacillus reuteri JCM 1112] Length = 443 Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 56/194 (28%), Positives = 104/194 (53%), Gaps = 22/194 (11%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 +F F+LG + +L ++ H ++ + YI + G P +V I Y Sbjct: 256 IFGFLLGTLFALMRLSKNKFLH-----SIAVCYIE--FLRGTPMMVQIMFVY-------- 300 Query: 251 LGQFNFIGGSTVS--PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308 F G+ + P ++ IA+S + A++AEI+RSG+ ++P GQ EAA +LG++ Sbjct: 301 -----FGIGALIQSLPALLAGIIAVSLNSGAYVAEIIRSGIQSIPLGQTEAARSLGMSKN 355 Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368 + R V++PQA+++I P L ++ + LLK+SSL +G ++L+ + + T + + + Sbjct: 356 ETFRYVIMPQALKNIWPALGNELITLLKDSSLVSVIGVSELMYQTQLVQSATYKGVLPLF 415 Query: 369 IWMFIYLSLSIMIA 382 I M IY L+ ++ Sbjct: 416 ITMIIYFILTFTLS 429 >gi|116628764|ref|YP_813936.1| ABC-type amino acid transport system, permease and periplasmic component [Lactobacillus gasseri ATCC 33323] gi|116094346|gb|ABJ59498.1| amino acid ABC transporter membrane protein, PAAT family / amino acid ABC transporter substrate-binding protein, PAAT family [Lactobacillus gasseri ATCC 33323] Length = 537 Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 42/120 (35%), Positives = 75/120 (62%) Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 +S T A++AE++R G+ A P+GQ EAA A+G+TH + ++LPQA+R+ +P +T++++ Sbjct: 391 VSINTGAYLAEVIRGGINATPKGQFEAASAIGMTHSQQMWHIILPQAIRNCLPSITNEFI 450 Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 +K++S+ + ++L VG T+ +QT Q + I IYL L+ I N + K+ Sbjct: 451 VNIKDTSVLSIISVSELFFVGTTVASQTFQFFQTYFIISMIYLILTFSITRIFNFIEKKL 510 Score = 39.3 bits (90), Expect = 0.99, Method: Compositional matrix adjust. Identities = 28/75 (37%), Positives = 34/75 (45%), Gaps = 10/75 (13%) Query: 85 YATAILVGFVNTFWLAFSGMIPATIIGTLVG----------AGRLSANKLVAWICRVYVE 134 Y + IL G T LA G I IG LVG G+ K+V WI VY+E Sbjct: 296 YGSMILGGVGMTLLLALVGTIVGFFIGLLVGIVRTIPTPKSTGKKWGLKIVDWILAVYIE 355 Query: 135 VFRNIPPLVVIFFLY 149 VFR P +V +Y Sbjct: 356 VFRGTPMMVQAAVIY 370 >gi|54309365|ref|YP_130385.1| putative ABC-type amino acid transport system, permease component [Photobacterium profundum SS9] gi|46913801|emb|CAG20583.1| putative ABC-type amino acid transport system, permease component [Photobacterium profundum SS9] Length = 365 Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 36/83 (43%), Positives = 61/83 (73%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I + ++AA++AE+VR GL A+PRGQ EAA ALGL++ K+ L++LPQA++ IP + + Sbjct: 235 IGVVLFSAAYMAEVVRGGLQAIPRGQYEAADALGLSYWKSMYLIVLPQALKITIPSIVNT 294 Query: 331 YLNLLKNSSLAVAVGFADLVSVG 353 ++ L K++SL + +G D++ +G Sbjct: 295 FIGLFKDTSLVLIIGMFDVLGIG 317 >gi|317055330|ref|YP_004103797.1| polar amino acid ABC transporter inner membrane subunit [Ruminococcus albus 7] gi|315447599|gb|ADU21163.1| polar amino acid ABC transporter, inner membrane subunit [Ruminococcus albus 7] Length = 229 Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 56/195 (28%), Positives = 103/195 (52%), Gaps = 19/195 (9%) Query: 209 RHFHEKTGK-----ALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVS 263 R + KTGK AL LY++ +I G P +V + + Y F VS Sbjct: 49 RCTYLKTGKMKIADALCRLYLT--VIRGTPMMVQLLIIY-----------FVVFASVNVS 95 Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 +++ IA + A++AEIVR G++++ GQMEA +LGL +R+ +++PQA++++ Sbjct: 96 KTLVAI-IAFGINSGAYVAEIVRGGIMSIDNGQMEAGRSLGLNYRQTMTSIIMPQALKTV 154 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 +P L ++ + LLK +S+A +G DL G I QT ++ IYL + + + Sbjct: 155 LPALANECIVLLKETSVAGYIGIYDLTKGGDEIRAQTYSPFLPLIAVAVIYLVMVMFLTF 214 Query: 384 FMNRLNAKIALKEKK 398 + +L +++ +++ Sbjct: 215 LVGKLERRLSANDRR 229 >gi|227818418|ref|YP_002822389.1| ABC transporter permease [Sinorhizobium fredii NGR234] gi|227337417|gb|ACP21636.1| putative permease component of ABC transporter [Sinorhizobium fredii NGR234] Length = 235 Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 48/111 (43%), Positives = 68/111 (61%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I L AA+ +E +RSG+ AV GQMEAA ALG ++ A R V++PQ R+ +P L + Sbjct: 106 IGLGLCQAAYFSEDLRSGMRAVSPGQMEAARALGHSYVSAMRFVMVPQGSRNALPALINH 165 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 ++L KNSSLAVA+G A+L I N + + E L+ +YL S+MI Sbjct: 166 SVSLFKNSSLAVAIGVAELTYAVKEIENLSFRTFESYLLVTVLYLVFSLMI 216 >gi|119510483|ref|ZP_01629616.1| Amino acid ABC transporter, permease protein, 3-TM region,His/Glu/Gln/Arg/opine [Nodularia spumigena CCY9414] gi|119464905|gb|EAW45809.1| Amino acid ABC transporter, permease protein, 3-TM region,His/Glu/Gln/Arg/opine [Nodularia spumigena CCY9414] Length = 383 Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 46/128 (35%), Positives = 76/128 (59%), Gaps = 3/128 (2%) Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 L ++AA++AE +R GL A+PRGQ+EAA ALGL L++LPQA+R++IP + Q+ Sbjct: 256 GLVLFSAAYMAENLRGGLQAIPRGQVEAAKALGLNTPLVVILIILPQALRAVIPAIVGQF 315 Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQT---GQAIEIILIWMFIYLSLSIMIALFMNRL 388 + L K++SL VG +L + +I+ Q G+ E+ L IY +++L RL Sbjct: 316 IGLFKDTSLLSLVGLVELTGISRSILAQPQFLGRYAEVYLFIGLIYWIFCYLMSLASRRL 375 Query: 389 NAKIALKE 396 ++ + + Sbjct: 376 ERQLNISQ 383 >gi|126461169|ref|YP_001042283.1| polar amino acid ABC transporter, inner membrane subunit [Rhodobacter sphaeroides ATCC 17029] gi|221638147|ref|YP_002524409.1| Polar amino acid ABC transporter inner membrane subunit [Rhodobacter sphaeroides KD131] gi|126102833|gb|ABN75511.1| polar amino acid ABC transporter, inner membrane subunit [Rhodobacter sphaeroides ATCC 17029] gi|221158928|gb|ACL99907.1| Polar amino acid ABC transporter, inner membrane subunit [Rhodobacter sphaeroides KD131] Length = 442 Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 38/78 (48%), Positives = 57/78 (73%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I ++ + AA+IAE++R GL A+PRGQ EAA ALGL + KA RL++LPQA++ IP + S Sbjct: 312 IMVTLFAAAYIAEVIRGGLAALPRGQYEAADALGLDYWKAQRLIILPQALKISIPGIVST 371 Query: 331 YLNLLKNSSLAVAVGFAD 348 ++ + K+++L V VG D Sbjct: 372 FIGMFKDTTLVVFVGLLD 389 >gi|229015747|ref|ZP_04172728.1| Amino acid ABC transproter, permease [Bacillus cereus AH1273] gi|229021947|ref|ZP_04178508.1| Amino acid ABC transproter, permease [Bacillus cereus AH1272] gi|228739362|gb|EEL89797.1| Amino acid ABC transproter, permease [Bacillus cereus AH1272] gi|228745552|gb|EEL95573.1| Amino acid ABC transproter, permease [Bacillus cereus AH1273] Length = 230 Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 47/126 (37%), Positives = 75/126 (59%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IAL+ + A+I EI R + +V RGQ+EAA +LG+ + A R ++LPQA R +PPL +Q Sbjct: 89 IALAIHNGAYITEIFRGSIQSVDRGQLEAARSLGMPYPLAMRRIILPQAFRLSLPPLGNQ 148 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++ LK+SSL VG ++L G +I Q ++ +I YL+L ++ +N L Sbjct: 149 FIIGLKDSSLVAYVGMSELWGSGLSIAAGNFQQLDTYIIVGVYYLALVLLFTYLVNLLEK 208 Query: 391 KIALKE 396 ++ KE Sbjct: 209 RLQRKE 214 >gi|238852979|ref|ZP_04643378.1| ABC-type amino acid transport system, permease and periplasmic component [Lactobacillus gasseri 202-4] gi|282852417|ref|ZP_06261759.1| ABC transporter, permease protein [Lactobacillus gasseri 224-1] gi|311111395|ref|ZP_07712792.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Lactobacillus gasseri MV-22] gi|238834429|gb|EEQ26667.1| ABC-type amino acid transport system, permease and periplasmic component [Lactobacillus gasseri 202-4] gi|282556159|gb|EFB61779.1| ABC transporter, permease protein [Lactobacillus gasseri 224-1] gi|311066549|gb|EFQ46889.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Lactobacillus gasseri MV-22] Length = 537 Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 42/120 (35%), Positives = 75/120 (62%) Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 +S T A++AE++R G+ A P+GQ EAA A+G+TH + ++LPQA+R+ +P +T++++ Sbjct: 391 VSINTGAYLAEVIRGGINATPKGQFEAASAIGMTHSQQMWHIILPQAIRNCLPSITNEFI 450 Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 +K++S+ + ++L VG T+ +QT Q + I IYL L+ I N + K+ Sbjct: 451 VNIKDTSVLSIISVSELFFVGTTVASQTFQFFQTYFIISMIYLILTFSITRIFNFIEKKL 510 Score = 39.3 bits (90), Expect = 0.99, Method: Compositional matrix adjust. Identities = 28/75 (37%), Positives = 34/75 (45%), Gaps = 10/75 (13%) Query: 85 YATAILVGFVNTFWLAFSGMIPATIIGTLVG----------AGRLSANKLVAWICRVYVE 134 Y + IL G T LA G I IG LVG G+ K+V WI VY+E Sbjct: 296 YGSMILGGVGMTLLLALVGTIVGFFIGLLVGIVRTIPTPKSTGKKWGLKIVDWILAVYIE 355 Query: 135 VFRNIPPLVVIFFLY 149 VFR P +V +Y Sbjct: 356 VFRGTPMMVQAAVIY 370 >gi|153010088|ref|YP_001371302.1| polar amino acid ABC transporter, inner membrane subunit [Ochrobactrum anthropi ATCC 49188] gi|151561976|gb|ABS15473.1| polar amino acid ABC transporter, inner membrane subunit [Ochrobactrum anthropi ATCC 49188] Length = 548 Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 68/215 (31%), Positives = 106/215 (49%), Gaps = 22/215 (10%) Query: 130 RVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI 189 V + FR PP + K+ +S + +P S+ + L+ D + Sbjct: 294 EVPLRTFRG-PPEALAALGKKADVSAVLLPAASVPANVPVLWQTEALN------DRDKSA 346 Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL---IFGLPTLVLIALKYQLHF 246 + VL I L L H H + PL S F+ I G+P LV++ L+ Sbjct: 347 GIAFVVLAIALGLLTA--CGHIHRRH----PLSIGSEFIVDTIRGIPMLVIV-----LYV 395 Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIA-LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305 P+ G + P M+ +A ++ +A++AEI RSG+ A+PRGQ+EAA +LGL Sbjct: 396 GLPLSGALKDATQGVIDPPNMARGVAAMALAYSAYLAEIFRSGINAIPRGQIEAARSLGL 455 Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340 + RLV+LPQA R IIPPL ++ + +LK++SL Sbjct: 456 NGWQTARLVILPQAFRIIIPPLGNELIAILKDTSL 490 >gi|118467773|ref|YP_890806.1| amino acid ABC transporter permease, 3-TM region, His/Glu/Gln/Arg/opine [Mycobacterium smegmatis str. MC2 155] gi|118169060|gb|ABK69956.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Mycobacterium smegmatis str. MC2 155] Length = 297 Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 52/162 (32%), Positives = 91/162 (56%), Gaps = 10/162 (6%) Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGG-------STVSPEFMSLYIALSCYTAA 279 +L GLP L+ I + Y L PV+ +GG + + F + + L+ +A Sbjct: 99 WLFRGLPVLLQILIWYNLALVIPVISIPLPMGGYLLQEPTNALVSAFTAALLGLALNESA 158 Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339 ++AEIVR+GL +V GQ+EAA ++G+T + R ++LPQAMR IIPP + ++++LK +S Sbjct: 159 YMAEIVRAGLNSVDSGQVEAAKSIGMTPAQTLRRIVLPQAMRVIIPPTGNDFIDMLKGTS 218 Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIIL---IWMFIYLSLS 378 +A +G +L+ I + +E + IW + ++L+ Sbjct: 219 IASVIGVTELLHAANNISSNNLLVMETLFAAAIWYMVVVTLA 260 Score = 39.7 bits (91), Expect = 0.88, Method: Compositional matrix adjust. Identities = 37/108 (34%), Positives = 49/108 (45%), Gaps = 12/108 (11%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 ++VG VNT LA A +IG + R SAN + W Y+ +FR +P L+ I Sbjct: 54 MVVGLVNTVLLALVAQAAAIVIGVGIALLRRSANPVARWFAAAYIWLFRGLPVLLQILIW 113 Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196 Y L IP SI LP G +L L TNA + F+ L Sbjct: 114 YNLALV---IPVISIPLPMGGYL---------LQEPTNALVSAFTAAL 149 >gi|77462293|ref|YP_351797.1| ABC glutamate/glutamine/aspartate/asparagine transporter, inner membrane subunit BztC [Rhodobacter sphaeroides 2.4.1] gi|77386711|gb|ABA77896.1| ABC glutamate/glutamine/aspartate/asparagine transporter, inner membrane subunit BztC [Rhodobacter sphaeroides 2.4.1] Length = 442 Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 38/78 (48%), Positives = 57/78 (73%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I ++ + AA+IAE++R GL A+PRGQ EAA ALGL + KA RL++LPQA++ IP + S Sbjct: 312 IMVTLFAAAYIAEVIRGGLAALPRGQYEAADALGLDYWKAQRLIILPQALKISIPGIVST 371 Query: 331 YLNLLKNSSLAVAVGFAD 348 ++ + K+++L V VG D Sbjct: 372 FIGMFKDTTLVVFVGLLD 389 >gi|330861765|emb|CBX71939.1| hypothetical protein YEW_AJ02060 [Yersinia enterocolitica W22703] Length = 119 Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 41/71 (57%), Positives = 55/71 (77%) Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338 AFIAE +RSG+ V +GQ AA ALGLT +A R V+LPQA++ +PPL QY+N++KNS Sbjct: 1 AFIAEELRSGISGVAKGQKYAAHALGLTGWQAMRHVVLPQALKIAMPPLLGQYMNIIKNS 60 Query: 339 SLAVAVGFADL 349 SLA+A+G A+L Sbjct: 61 SLAMAIGVAEL 71 >gi|300362597|ref|ZP_07058773.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus gasseri JV-V03] gi|300353588|gb|EFJ69460.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus gasseri JV-V03] Length = 537 Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 42/120 (35%), Positives = 75/120 (62%) Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 +S T A++AE++R G+ A P+GQ EAA A+G+TH + ++LPQA+R+ +P +T++++ Sbjct: 391 VSINTGAYLAEVIRGGINATPKGQFEAASAIGMTHSQQMWHIILPQAIRNCLPSITNEFI 450 Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 +K++S+ + ++L VG T+ +QT Q + I IYL L+ I N + K+ Sbjct: 451 VNIKDTSVLSIISVSELFFVGTTVASQTFQFFQTYFIISMIYLILTFSITRIFNFIEKKL 510 Score = 39.3 bits (90), Expect = 0.99, Method: Compositional matrix adjust. Identities = 28/75 (37%), Positives = 34/75 (45%), Gaps = 10/75 (13%) Query: 85 YATAILVGFVNTFWLAFSGMIPATIIGTLVG----------AGRLSANKLVAWICRVYVE 134 Y + IL G T LA G I IG LVG G+ K+V WI VY+E Sbjct: 296 YGSMILGGVGMTLLLALVGTIVGFFIGLLVGIVRTIPTPKSTGKKWGLKIVDWILAVYIE 355 Query: 135 VFRNIPPLVVIFFLY 149 VFR P +V +Y Sbjct: 356 VFRGTPMMVQAAVIY 370 >gi|134103707|ref|YP_001109368.1| putative ABC transporter permease protein [Saccharopolyspora erythraea NRRL 2338] gi|291004758|ref|ZP_06562731.1| putative ABC transporter permease protein [Saccharopolyspora erythraea NRRL 2338] gi|133916330|emb|CAM06443.1| putative ABC transporter permease protein [Saccharopolyspora erythraea NRRL 2338] Length = 264 Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 74/210 (35%), Positives = 108/210 (51%), Gaps = 30/210 (14%) Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF---LIFGLPTL-VLIALKYQLH 245 F F LGIVL+L K P +I+T L GLP L V IAL Sbjct: 67 FGFGLALGIVLALM----------KLSPVGPYRWIATAYIELFRGLPALLVFIAL----G 112 Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305 F P+ Q F STV +AL AA++AE +R+G+ AVPRGQ+EAA +LG+ Sbjct: 113 FGVPIAFQMRFDIYSTV-------MLALGLVGAAYMAETIRAGVQAVPRGQVEAARSLGM 165 Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA----DLVSVGGTIINQTG 361 + + V++PQA R I+PPLT++ + L K+SSL +G A +L G +N+ Sbjct: 166 SPTRTMLTVVMPQAFRIILPPLTNELILLTKDSSLVYLLGLASNEYELAKFGRNALNEYA 225 Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 ++ +L+ YL ++I ++ N L K Sbjct: 226 -SLTPLLVAGLCYLIITIPLSRVSNVLERK 254 >gi|70733437|ref|YP_263212.1| amino acid ABC transporter permease [Pseudomonas fluorescens Pf-5] gi|68347736|gb|AAY95342.1| amino acid ABC transporter, permease protein [Pseudomonas fluorescens Pf-5] Length = 286 Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 46/119 (38%), Positives = 75/119 (63%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IALS A+++EI R+G++ VP GQ +AA+ALG++ V LPQAMR+IIPP T+Q Sbjct: 157 IALSLNYGAYLSEIFRAGILGVPHGQRQAALALGMSDSVIFWQVTLPQAMRTIIPPATNQ 216 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 ++++LK+SSL +G +++ + + + + IE++ IY LSI + L R+ Sbjct: 217 FISMLKDSSLISVMGVWEVMFLAQSYGRSSYRYIEMLSTAALIYWLLSIGLELIQARME 275 >gi|70733738|ref|YP_257378.1| glutamine/glutamate ABC transporter permease [Pseudomonas fluorescens Pf-5] gi|68348037|gb|AAY95643.1| glutamine/glutamate ABC transporter, permease protein [Pseudomonas fluorescens Pf-5] Length = 219 Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 50/135 (37%), Positives = 78/135 (57%), Gaps = 10/135 (7%) Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291 +P LV + Y L F P+ F G S P F + LS + A+ + E+VR L + Sbjct: 66 IPVLVWL---YLLFFGFPI-----FFGLSI--PSFTCAVLVLSLWGASEVGEVVRGALQS 115 Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 +PRGQ EA +++GL+ + VLLPQA++ + PP + Y ++K SSLAV +G D++ Sbjct: 116 LPRGQREAGLSIGLSGAQLYGYVLLPQALKRMTPPTINVYTRIIKTSSLAVLIGVVDVIK 175 Query: 352 VGGTIINQTGQAIEI 366 VG II +T +++ I Sbjct: 176 VGQQIIERTYESVLI 190 >gi|282863109|ref|ZP_06272169.1| polar amino acid ABC transporter, inner membrane subunit [Streptomyces sp. ACTE] gi|282562091|gb|EFB67633.1| polar amino acid ABC transporter, inner membrane subunit [Streptomyces sp. ACTE] Length = 266 Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 65/210 (30%), Positives = 108/210 (51%), Gaps = 27/210 (12%) Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL---VLI 238 T+ A F+F VLG+V++L + G +YI F GLP L + + Sbjct: 63 TVVYTASGFLFGLVLGLVVALMRLSSVAPYRWAAG-----VYIEIFR--GLPALLIFIFV 115 Query: 239 ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQME 298 + L F I G T + + + L AA++AE R+G+ AVP+GQME Sbjct: 116 GVAVPLAFPG------TEIPGGT----YGKVALGLGLVAAAYMAETFRAGIQAVPKGQME 165 Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA----DLVSVGG 354 AA +LG +H +A V++PQA+R ++PPLT++ + L K+SSL + +G +L G Sbjct: 166 AARSLGFSHARAMVSVVIPQALRVVVPPLTNELVLLFKDSSLVLFLGVTLQERELTKFGR 225 Query: 355 TIINQTGQAIEII---LIWMFIYLSLSIMI 381 + +QT + I+ L ++ + + LS ++ Sbjct: 226 DLASQTANSTPILVAGLCYLLVTIPLSFVV 255 Score = 36.6 bits (83), Expect = 7.5, Method: Compositional matrix adjust. Identities = 22/69 (31%), Positives = 34/69 (49%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 I VNT SG + ++G +V RLS+ W VY+E+FR +P L++ F+ Sbjct: 56 ITTALVNTVVYTASGFLFGLVLGLVVALMRLSSVAPYRWAAGVYIEIFRGLPALLIFIFV 115 Query: 149 YKSVLSVLP 157 +V P Sbjct: 116 GVAVPLAFP 124 >gi|238927936|ref|ZP_04659696.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Selenomonas flueggei ATCC 43531] gi|238884269|gb|EEQ47907.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Selenomonas flueggei ATCC 43531] Length = 214 Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 62/205 (30%), Positives = 109/205 (53%), Gaps = 19/205 (9%) Query: 188 KIFVFSFVLGIVLSLFAT--RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH 245 +IF + L + L LFA RLS HF + +L I +++ G P ++ + Y Sbjct: 20 EIFCVTLALALPLGLFAALGRLS-HFRPLSR----MLEIYIWIMRGTPLMLQLLFVY--- 71 Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305 F P++G + P+ + +A AA+ AEI R+G+ AVPRGQ EAA LG+ Sbjct: 72 FALPMVG--------ILLPDIAAALLAFILNYAAYFAEIFRAGIQAVPRGQFEAARVLGM 123 Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365 + R ++LPQ +R +PP++++ +NL+K++SL + DL+ V TI+ + Sbjct: 124 SAPLTMRRIILPQVLRITLPPVSNETINLVKDTSLVYILAMNDLLRVARTIVQREFDMTP 183 Query: 366 IILIWMFIYLSLSIMIALFMNRLNA 390 ++ +F YL+++ ++ +L A Sbjct: 184 FLIAGIF-YLTMTAVLTYGFKKLEA 207 >gi|226360126|ref|YP_002777904.1| amino acid ABC transporter permease protein [Rhodococcus opacus B4] gi|226238611|dbj|BAH48959.1| putative amino acid ABC transporter permease protein [Rhodococcus opacus B4] Length = 327 Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 53/158 (33%), Positives = 87/158 (55%), Gaps = 4/158 (2%) Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302 QL P + QF I ++ F+ I L AA++AEIVR+G+ +V GQ EA++A Sbjct: 135 QLDLGIPFVHQFVHIDLQGINAAFLFAVIGLGLNEAAYMAEIVRAGVNSVAEGQSEASVA 194 Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA-DLVSVGGTIINQTG 361 LG+T + R +LPQAMR IIPP ++ +++LK +SL AV ++ +L I Sbjct: 195 LGMTWSQTMRRTVLPQAMRVIIPPTGNELISMLKTTSLVTAVPYSLELYGRARDISGANF 254 Query: 362 QAIEIILI---WMFIYLSLSIMIALFMNRLNAKIALKE 396 Q I ++++ W SL ++ ++ R +K A ++ Sbjct: 255 QPIPLLMVAATWYLAITSLLMIGQFYLERYYSKGASRK 292 >gi|47094446|ref|ZP_00232127.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Listeria monocytogenes str. 4b H7858] gi|47017175|gb|EAL08027.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Listeria monocytogenes str. 4b H7858] Length = 395 Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 38/91 (41%), Positives = 67/91 (73%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+S IALS +AA++AEI+R+G+ AV +GQMEAA +LG+T + R ++LPQA+++I+P Sbjct: 265 FVSGCIALSLNSAAYVAEIIRAGISAVNKGQMEAARSLGMTQGASMRYIILPQAVKNILP 324 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356 L ++++ ++K SS+ +G +L+ + G + Sbjct: 325 ALGNEFVTVIKESSIVSVIGVTELMFMTGVV 355 >gi|298249929|ref|ZP_06973733.1| polar amino acid ABC transporter, inner membrane subunit [Ktedonobacter racemifer DSM 44963] gi|297547933|gb|EFH81800.1| polar amino acid ABC transporter, inner membrane subunit [Ktedonobacter racemifer DSM 44963] Length = 251 Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 43/134 (32%), Positives = 76/134 (56%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P+F + +A S A+++EI+R+ + AV GQMEA+ ALG+ + A R ++LPQA R + Sbjct: 92 PDFACILVAFSLNEGAYMSEIIRAAIGAVDPGQMEASKALGMRYWVAMRRIILPQAARVV 151 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 IPPL +++ N+LK +S+A +G +L T T E++++ YL L+ + + Sbjct: 152 IPPLGNEFNNMLKTTSIATVIGMLELTGTARTFGAPTFNIFELLIVATVYYLILTTIWDV 211 Query: 384 FMNRLNAKIALKEK 397 + ++ K Sbjct: 212 IQRWIERRLDPDRK 225 >gi|218887009|ref|YP_002436330.1| polar amino acid ABC transporter inner membrane protein [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|147842971|dbj|BAF62530.1| glutamine ABC transporter, permease protein [Desulfovibrio vulgaris] gi|218757963|gb|ACL08862.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 223 Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 61/192 (31%), Positives = 100/192 (52%), Gaps = 16/192 (8%) Query: 204 ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVS 263 AT L++ K +AL +Y+ I G P +V + L+F P+ Sbjct: 41 ATGLAKTARGKLPRALADIYVEA--IRGTPLIVQVMF---LYFGVPLATGMRI------- 88 Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P + IA++ + A+IAEIVR + ++ GQ EA ++GLT + V+ PQA R + Sbjct: 89 PPVTAGIIAIAVNSGAYIAEIVRGAVESIDVGQTEAGRSIGLTRMQTLLYVVWPQAFRRM 148 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA- 382 IPPL +Q++ LK++SL V +G +L G II +A E+ L +YL +++ IA Sbjct: 149 IPPLGNQFIISLKDTSLLVVIGVGELTRQGQEIIAVNFRAFEVWLTVAVMYLVMTLSIAR 208 Query: 383 ---LFMNRLNAK 391 ++ +LNA+ Sbjct: 209 ALRVYERKLNAR 220 >gi|325277060|ref|ZP_08142718.1| polar amino acid ABC transporter inner membrane subunit [Pseudomonas sp. TJI-51] gi|324097810|gb|EGB95998.1| polar amino acid ABC transporter inner membrane subunit [Pseudomonas sp. TJI-51] Length = 273 Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 45/119 (37%), Positives = 75/119 (63%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IALS A+++EI R+G++ V RGQ EAA+ALG+ + ++LPQAMR IIPP +Q Sbjct: 146 IALSLNYGAYLSEIFRAGILGVARGQREAALALGMRPPQTFCYIVLPQAMRVIIPPTANQ 205 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 ++++LK+SSL +G +++ + + + + +E++ IY LSI++ L RL Sbjct: 206 FISMLKDSSLISVMGVWEVMFLAQSYGRSSYRYLEMLTTAAIIYWVLSILLELLQARLE 264 >gi|295398454|ref|ZP_06808493.1| amino acid ABC superfamily ATP binding cassette transporter [Aerococcus viridans ATCC 11563] gi|294973318|gb|EFG49106.1| amino acid ABC superfamily ATP binding cassette transporter [Aerococcus viridans ATCC 11563] Length = 514 Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 64/206 (31%), Positives = 108/206 (52%), Gaps = 23/206 (11%) Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251 F +LGI L+L R + K L YI + G P ++ + + L Sbjct: 328 FGMILGIFLALM-----RLTNNPVLKFLATAYIE--FVRGTPLMIQVLFMF--------L 372 Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311 G + G ST++ +S+ S + A+IAEI+R G+ +V +GQ EAA +LGL + + Sbjct: 373 GVGSIFGWSTMTAGLVSV----SMNSGAYIAEIIRGGIQSVDKGQAEAARSLGLGYWQTM 428 Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371 R V+ PQ++RSI P L ++++ L+K SS+ +G A+L + + T QA+ + I M Sbjct: 429 RKVIFPQSLRSIWPSLGNEFITLIKESSIVSTIGVAELTFQTRAVTSITYQAVVPLFISM 488 Query: 372 FIYL----SLSIMIALFMNRLNAKIA 393 IY +LS ++ ++ ++N K A Sbjct: 489 IIYFIMTYALSQVLNVYERKMNQKYA 514 >gi|224368642|ref|YP_002602804.1| ABC-type amino acid transporter, permease component [Desulfobacterium autotrophicum HRM2] gi|223691358|gb|ACN14641.1| ABC-type amino acid transporter, permease component [Desulfobacterium autotrophicum HRM2] Length = 217 Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 45/129 (34%), Positives = 77/129 (59%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + +A++ +AFI EIV G+ ++ +GQ EAA + GL+ + RLV+LPQAMR I+P Sbjct: 89 FSAALLAMAIMGSAFICEIVAGGIASISKGQWEAAESSGLSRIQQMRLVILPQAMRVILP 148 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PL Q++ L+K++S+ +G DL VG + + + + + + +Y +S + L Sbjct: 149 PLVGQFVLLIKDTSVVSVIGVMDLTRVGWITVIRIPEGLMVFSLVGILYFVISYPLILLS 208 Query: 386 NRLNAKIAL 394 N L K+A+ Sbjct: 209 NYLERKMAV 217 >gi|218515611|ref|ZP_03512451.1| putative permease component of ABC transporter [Rhizobium etli 8C-3] Length = 235 Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 47/111 (42%), Positives = 69/111 (62%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I L AA+ +E +RSG+ +V GQMEAA ALG + A R V++PQ +R+ +PPL + Sbjct: 106 IGLGLCQAAYFSEDLRSGVRSVGPGQMEAARALGHGYVSAMRFVIMPQGVRNALPPLINH 165 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 ++L KNSSLAV +G ++L I N + + EI LI +YL S++I Sbjct: 166 SVSLFKNSSLAVVIGASELTHAVKEIENLSFRTFEIYLIGTVLYLVFSLVI 216 >gi|224477394|ref|YP_002635000.1| hypothetical protein Sca_1909 [Staphylococcus carnosus subsp. carnosus TM300] gi|222422001|emb|CAL28815.1| hypothetical protein SCA_1909 [Staphylococcus carnosus subsp. carnosus TM300] Length = 235 Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 52/154 (33%), Positives = 93/154 (60%), Gaps = 8/154 (5%) Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248 I + +FVLG++++LF T L R K + + +Y+S +I G P +V + + + + Sbjct: 30 ITLVTFVLGLIIALF-TALMRISTSKILRGIARVYVS--IIRGTPMIVQL---FIIFYGL 83 Query: 249 PVLGQF--NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306 P LG+ N P ++ I LS A+ +EI+R G+I++P+GQ EAA ++G+ Sbjct: 84 PELGRLVTNNPDTQWTLPSVVAAIIGLSLNVGAYASEIIRGGIISIPKGQSEAAYSIGMN 143 Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340 +R+ + ++LPQA+R +P L + +L+LLK++SL Sbjct: 144 YRQTIQRIILPQAIRVSVPALGNTFLSLLKDTSL 177 >gi|313632218|gb|EFR99284.1| His/Glu/Gln/Arg/opine ABC transporter permease [Listeria seeligeri FSL N1-067] gi|313636716|gb|EFS02380.1| His/Glu/Gln/Arg/opine ABC transporter permease [Listeria seeligeri FSL S4-171] Length = 226 Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 38/91 (41%), Positives = 67/91 (73%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+S IALS +AA++AEI+R+G+ AV +GQMEAA +LG+T + R ++LPQA+++I+P Sbjct: 96 FVSGCIALSLNSAAYVAEIIRAGISAVNKGQMEAARSLGMTQSASMRYIILPQAVKNILP 155 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356 L ++++ ++K SS+ +G +L+ + G + Sbjct: 156 ALGNEFVTVIKESSIVSVIGVTELMFMTGVV 186 >gi|187479526|ref|YP_787551.1| L-amino acid ABC transporter permease [Bordetella avium 197N] gi|115424113|emb|CAJ50666.1| L-amino acid ABC transporter, permease protein [Bordetella avium 197N] Length = 366 Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 69/230 (30%), Positives = 115/230 (50%), Gaps = 19/230 (8%) Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231 N+R P LT+ + F+F +G++L+L R + KAL ++YI LI G Sbjct: 153 NSRWGGLP-LTLILSTFGIAFAFPIGVLLAL-----GRRSNMPAIKALCVVYIE--LIRG 204 Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291 +P + L+ F V+ G ++ + + IA+ + AA+IAE VR GL A Sbjct: 205 VPLISLL-------FMSSVMLPLFLPEGFSID-KLLRAQIAIILFAAAYIAETVRGGLQA 256 Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV- 350 + +GQ E A +LGL++ + R ++LPQA++ +IPPL S ++ L K++SL V +G DL Sbjct: 257 ISKGQYEGADSLGLSYWQKMRKIILPQALKVVIPPLVSIFIALFKDTSLVVIIGIFDLTL 316 Query: 351 --SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 + G IE L IY ++ + L ++A ++ Sbjct: 317 AAKAALSDAAWRGFGIEAYLFISLIYFVFCFSMSKYSQHLERRLATGHQR 366 >gi|257092717|ref|YP_003166358.1| polar amino acid ABC transporter inner membrane subunit [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257045241|gb|ACV34429.1| polar amino acid ABC transporter, inner membrane subunit [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 226 Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 46/140 (32%), Positives = 82/140 (58%), Gaps = 6/140 (4%) Query: 254 FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313 F F GS + S + + AA+ +EI+R+G+ +VP+GQM AA ALG+T+ +A RL Sbjct: 87 FGFPRGSDM--RLSSAIAGFALFEAAYYSEIIRAGIQSVPKGQMAAASALGMTYGQAMRL 144 Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL----I 369 V+LPQA R+++P L +Q + L +++SL AD + ++ G+ +E++L + Sbjct: 145 VVLPQAFRNMVPLLLTQGIILFQDTSLVYVSALADFFGAAYKVGDRDGRLVELLLFAGAV 204 Query: 370 WMFIYLSLSIMIALFMNRLN 389 + I + S ++ + N+L Sbjct: 205 YFVICFTASRIVRYYQNKLK 224 >gi|190894778|ref|YP_001985071.1| glutamine ABC transporter ATP-binding protein [Rhizobium etli CIAT 652] gi|190700439|gb|ACE94521.1| glutamine ABC transporter, ATP-binding protein [Rhizobium etli CIAT 652] Length = 505 Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 67/213 (31%), Positives = 111/213 (52%), Gaps = 24/213 (11%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 V V+G+VL++ SR LP + T + GLP +V I + Sbjct: 41 VLGVVIGMVLAVMGISQSRWLR------LPA-RVYTDIFRGLPAIVTIL----------I 83 Query: 251 LGQ-FNFIGGSTVSPEFMSLYI-ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308 +GQ F IG P L I ALS A+I EI RSG+ +V RGQMEA AL +++ Sbjct: 84 IGQGFARIGREIFGPSPFPLGILALSLIAGAYIGEIFRSGIQSVERGQMEACRALSMSYG 143 Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF----ADLVSVGGTIINQTGQAI 364 + RL+++PQ +R ++P L +Q++ +K+SSL +G ++ VG TG Sbjct: 144 QGMRLIVIPQGIRRVLPALVNQFIGNVKDSSLVYFLGLLASEREIFRVGQDQAVVTGNLS 203 Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 ++L +F YL +++ + F+N ++A++ L ++ Sbjct: 204 PLLLAGVF-YLVITVPLTHFVNYIDARLRLGKQ 235 >gi|310767115|gb|ADP12065.1| glutamine ABC transporter, permease protein [Erwinia sp. Ejp617] Length = 219 Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 61/206 (29%), Positives = 113/206 (54%), Gaps = 12/206 (5%) Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248 I V V G+++ L A +R + + + L++I LI G P +V + Y F Sbjct: 25 ISVLGLVGGVIIGLIAG-FARAYGGWLSRNIALVFIE--LIRGTPIVVQVMFIY---FAL 78 Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308 P+ F + + P F + + + + A+IAEI R ++++ RG EA +ALGL+ R Sbjct: 79 PM--AFTDL---RIDP-FSAAVVTIIINSGAYIAEITRGAVLSINRGFREAGLALGLSGR 132 Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368 + R V++P A+R ++PPL +Q++ +K++SL + +G A+L G II +A+EI Sbjct: 133 ETLRYVIMPLALRRMLPPLGNQWIVSIKDTSLFIVIGVAELTRQGQEIIAGNFRALEIWS 192 Query: 369 IWMFIYLSLSIMIALFMNRLNAKIAL 394 IYL ++++++ + RL ++ + Sbjct: 193 AVAVIYLIITLVLSFVLRRLERRMKI 218 >gi|269964207|ref|ZP_06178498.1| amino acid ABC transporter, permease protein [Vibrio harveyi 1DA3] gi|269831056|gb|EEZ85224.1| amino acid ABC transporter, permease protein [Vibrio harveyi 1DA3] Length = 365 Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 37/98 (37%), Positives = 66/98 (67%) Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315 F+ + + + + I + ++AA++AE+VR GL A+P+GQ EAA ALGLT+ K L++ Sbjct: 220 FLAQGSETDKLIRALIGVVMFSAAYMAEVVRGGLQAIPKGQYEAADALGLTYWKKMGLII 279 Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353 LPQA++ IP + + ++ L K++SL + +G D++ +G Sbjct: 280 LPQALKITIPSIVNTFIGLFKDTSLVLIIGMFDVLGIG 317 >gi|315640806|ref|ZP_07895906.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus italicus DSM 15952] gi|315483418|gb|EFU73914.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus italicus DSM 15952] Length = 218 Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 55/175 (31%), Positives = 91/175 (52%), Gaps = 28/175 (16%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 + LPLL I F F LP I +K+ + F S IAL+ + Sbjct: 63 RNLPLLLIIFFTYFALPQ---IGIKFDI---------------------FWSAVIALTIF 98 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 +A ++EI R+GL AVP+GQMEA ++ GLT+ + +++PQA RS++P + SQ ++L+K Sbjct: 99 ESAMLSEIFRAGLNAVPKGQMEAGLSTGLTYLQVMFSIMIPQAFRSMVPAIVSQLISLVK 158 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 ++SLAV + + I Q + I M++ L+L + ++ L +K Sbjct: 159 DTSLAVIISLPEFTHNAKIIYGQNSNYV----IPMYVALTLGYFVICYLLSLLSK 209 >gi|289178331|gb|ADC85577.1| Amino acid ABC transporter permease protein [Bifidobacterium animalis subsp. lactis BB-12] Length = 353 Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 51/124 (41%), Positives = 72/124 (58%), Gaps = 1/124 (0%) Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312 +F I + F + +I L+ AA++AEIVR+GL AV GQ EAA ALG+ R Sbjct: 170 EFWSIDSQAIITAFNAAWIGLALNEAAYLAEIVRAGLDAVDPGQEEAAKALGMKRSMIMR 229 Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA-DLVSVGGTIINQTGQAIEIILIWM 371 V+LPQAMR IIPP ++ + +LK +SL +AV F DL I N+ + I ++L+ Sbjct: 230 RVILPQAMRIIIPPTGNETIGMLKTTSLVLAVPFTLDLQYATNAIANRIYKPIPLLLVAS 289 Query: 372 FIYL 375 YL Sbjct: 290 IWYL 293 >gi|332041346|gb|EGI77708.1| polar amino acid ABC transporter inner membrane subunit [Hylemonella gracilis ATCC 19624] Length = 240 Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 44/134 (32%), Positives = 81/134 (60%), Gaps = 1/134 (0%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 +F ++ IAL+ + A++AE+VR+G+ +PRGQME+A +LGL+ +A R V+LPQA+R+++ Sbjct: 96 QFTTMLIALALFNGAYLAEVVRAGIQGLPRGQMESARSLGLSWLQAMRGVILPQALRNML 155 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT-GQAIEIILIWMFIYLSLSIMIAL 383 P L SQ++ +K +SL +G ++ + I Q +++ LI Y L ++ Sbjct: 156 PSLVSQFVMTIKETSLGYIIGLNEVSFITSQINTQVFVYPVQLYLILGLSYFVLCFSLSR 215 Query: 384 FMNRLNAKIALKEK 397 F + ++ K + Sbjct: 216 FAYWMERRLERKAR 229 >gi|327189448|gb|EGE56610.1| glutamine ABC transporter ATP-binding protein [Rhizobium etli CNPAF512] Length = 507 Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 67/213 (31%), Positives = 111/213 (52%), Gaps = 24/213 (11%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 V V+G+VL++ SR LP + T + GLP +V I + Sbjct: 43 VLGVVIGMVLAVMGISQSRWLR------LPA-RVYTDIFRGLPAIVTIL----------I 85 Query: 251 LGQ-FNFIGGSTVSPEFMSLYI-ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308 +GQ F IG P L I ALS A+I EI RSG+ +V RGQMEA AL +++ Sbjct: 86 IGQGFARIGREIFGPSPFPLGILALSLIAGAYIGEIFRSGIQSVERGQMEACRALSMSYG 145 Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF----ADLVSVGGTIINQTGQAI 364 + RL+++PQ +R ++P L +Q++ +K+SSL +G ++ VG TG Sbjct: 146 QGMRLIVIPQGIRRVLPALVNQFIGNVKDSSLVYFLGLLASEREIFRVGQDQAVVTGNLS 205 Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 ++L +F YL +++ + F+N ++A++ L ++ Sbjct: 206 PLLLAGVF-YLVITVPLTHFVNYIDARLRLGKQ 237 >gi|325063349|gb|ADY67039.1| amino acid ABC transporter, membrane spanning protein [Agrobacterium sp. H13-3] Length = 235 Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 55/150 (36%), Positives = 84/150 (56%), Gaps = 2/150 (1%) Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291 +PTLV + L Y F G +++ G F + L AA+ +E +RSGL + Sbjct: 69 VPTLVQLMLWYFGIFTLLPSGLTDWLIGHNAEAIFA--VVGLGLCQAAYFSEDLRSGLRS 126 Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 V GQMEAA ALG + A R +++PQ +R+ +PPL + ++L KNSSLA+ +G ++L Sbjct: 127 VSPGQMEAAKALGHGYLSAMRFIIMPQGVRNALPPLINHSVSLFKNSSLALIIGASELTH 186 Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 I N + Q EI L+ +YL S++I Sbjct: 187 AIKEIENLSFQTFEIYLVGTVLYLFFSLLI 216 >gi|238917619|ref|YP_002931136.1| polar amino acid transport system permease protein [Eubacterium eligens ATCC 27750] gi|238872979|gb|ACR72689.1| polar amino acid transport system permease protein [Eubacterium eligens ATCC 27750] Length = 506 Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 60/210 (28%), Positives = 108/210 (51%), Gaps = 32/210 (15%) Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF---LIFGLPTLVLIALKY-----Q 243 F+ ++G+V+ F + R H+KTG L +I +I G PT+V + + Y Sbjct: 311 FAALMGVVIG-FLIAVVRSNHDKTGHMKILNFICNIYLTVIRGTPTMVQLLIIYYVIFSS 369 Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 +H DK ++ +A + A++AEI RSG++++ GQ EAA +L Sbjct: 370 VHIDKLIVA-----------------ILAFGINSGAYVAEIFRSGIMSIDNGQFEAARSL 412 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363 GL+++ V+LPQA ++++P L ++++ LLK +S++ +G DL GG II Sbjct: 413 GLSYKTTMISVILPQAFKNVLPALANEFIVLLKETSISGYIGLNDLTR-GGDIIRSITYD 471 Query: 364 -----IEIILIWMFIYLSLSIMIALFMNRL 388 I + +I++ + + LS ++ RL Sbjct: 472 PMLPLIGVAIIYLVMVMGLSQLVKKLERRL 501 Score = 38.1 bits (87), Expect = 2.4, Method: Compositional matrix adjust. Identities = 28/90 (31%), Positives = 47/90 (52%), Gaps = 8/90 (8%) Query: 87 TAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK-----LVAWICRVYVEVFRNIPP 141 T +L G +NT +AF + +IG L+ R + +K ++ +IC +Y+ V R P Sbjct: 296 TYLLKGLLNTVIIAFFAALMGVVIGFLIAVVRSNHDKTGHMKILNFICNIYLTVIRGTPT 355 Query: 142 LVVIFFLYKSVLSVLPIPDHSIV--LPFGM 169 +V + +Y + S + I D IV L FG+ Sbjct: 356 MVQLLIIYYVIFSSVHI-DKLIVAILAFGI 384 >gi|227544923|ref|ZP_03974972.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus reuteri CF48-3A] gi|300910049|ref|ZP_07127509.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus reuteri SD2112] gi|227185090|gb|EEI65161.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus reuteri CF48-3A] gi|300892697|gb|EFK86057.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus reuteri SD2112] Length = 503 Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 56/194 (28%), Positives = 104/194 (53%), Gaps = 22/194 (11%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 +F F+LG + +L ++ H ++ + YI + G P +V I Y Sbjct: 316 IFGFLLGTLFALMRLSKNKFLH-----SIAVCYIE--FLRGTPMMVQIMFVY-------- 360 Query: 251 LGQFNFIGGSTVS--PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308 F G+ + P ++ IA+S + A++AEI+RSG+ ++P GQ EAA +LG++ Sbjct: 361 -----FGIGAIIQSLPALLAGIIAVSLNSGAYVAEIIRSGIQSIPLGQTEAARSLGMSKS 415 Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368 + R V++PQA+++I P L ++ + LLK+SSL +G ++L+ + + T + + + Sbjct: 416 ETFRYVIMPQALKNIWPALGNELITLLKDSSLVSVIGVSELMYQTQLVQSATYKGVLPLF 475 Query: 369 IWMFIYLSLSIMIA 382 I M IY L+ ++ Sbjct: 476 ITMIIYFILTFTLS 489 >gi|28898396|ref|NP_798001.1| amino acid ABC transporter permease [Vibrio parahaemolyticus RIMD 2210633] gi|28806613|dbj|BAC59885.1| amino acid ABC transporter, permease protein [Vibrio parahaemolyticus RIMD 2210633] Length = 368 Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 36/83 (43%), Positives = 61/83 (73%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I + ++AA++AE+VR GL A+P+GQ EAA ALGL++ K T L++LPQA++ IP + + Sbjct: 238 IGVVMFSAAYMAEVVRGGLQAIPKGQYEAADALGLSYWKKTGLIILPQALKITIPSIVNT 297 Query: 331 YLNLLKNSSLAVAVGFADLVSVG 353 ++ L K++SL + +G D++ +G Sbjct: 298 FIGLFKDTSLVLIIGMFDVLGIG 320 >gi|224541408|ref|ZP_03681947.1| hypothetical protein CATMIT_00570 [Catenibacterium mitsuokai DSM 15897] gi|224525654|gb|EEF94759.1| hypothetical protein CATMIT_00570 [Catenibacterium mitsuokai DSM 15897] Length = 242 Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 54/183 (29%), Positives = 95/183 (51%), Gaps = 14/183 (7%) Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269 F ++ G+ + Y+ F G P +V Y L KPVL NF G + Sbjct: 61 RFFKQLGRFITGFYVWVFR--GTPMMVQAVFLYYLF--KPVLNWNNFTAGMVI------- 109 Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329 +S TAA++AEI+RSG+ ++ GQMEAA +LG+T+ + ++ PQA+++ P L + Sbjct: 110 ---ISINTAAYMAEIIRSGIQSIDAGQMEAAKSLGMTNTQTMINIIFPQAIKNTFPSLGN 166 Query: 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 Q++ +K+S + A+ +L ++ + IE+ L+ +YL L+ + +N + Sbjct: 167 QFIVNIKDSCMLNAISVVELFFQAQSVAGTNMRYIEVYLVVAILYLILTTVATFVLNYIE 226 Query: 390 AKI 392 KI Sbjct: 227 KKI 229 >gi|153811655|ref|ZP_01964323.1| hypothetical protein RUMOBE_02047 [Ruminococcus obeum ATCC 29174] gi|149832396|gb|EDM87481.1| hypothetical protein RUMOBE_02047 [Ruminococcus obeum ATCC 29174] Length = 223 Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 53/175 (30%), Positives = 102/175 (58%), Gaps = 23/175 (13%) Query: 192 FSFVLGIVLSLF------ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH 245 F+ +LG+ L A R+ + +P++ ++ F+ FG+P Y L+ Sbjct: 29 FACILGMFFGLLSVLKNKACRIISSIFVDVIRGVPMIVLAYFIYFGVP--------YCLN 80 Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305 ++G FNF + + + ++ +AL+C A++AEI+R+G+++V GQMEAA +LGL Sbjct: 81 ---NMMG-FNF---TLTALQAGTVCLALNC--GAYMAEIIRAGILSVDSGQMEAARSLGL 131 Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 + +A V+LPQA+R++IP + +Q++ LK++S+ +GF +LV+ ++ + Sbjct: 132 PYSRAMIRVVLPQAIRTMIPSIINQFIITLKDTSILSVIGFPELVNTAKNVVANS 186 Score = 37.4 bits (85), Expect = 3.8, Method: Compositional matrix adjust. Identities = 21/70 (30%), Positives = 35/70 (50%) Query: 83 SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142 + Y +L+ T LA G+ A I+G G + NK I ++V+V R +P + Sbjct: 6 TRYGNLLLLAMGQTLLLALCGLFFACILGMFFGLLSVLKNKACRIISSIFVDVIRGVPMI 65 Query: 143 VVIFFLYKSV 152 V+ +F+Y V Sbjct: 66 VLAYFIYFGV 75 >gi|16077428|ref|NP_388242.1| cystine ABC transporter permease [Bacillus subtilis subsp. subtilis str. 168] gi|221308174|ref|ZP_03590021.1| hypothetical protein Bsubs1_02043 [Bacillus subtilis subsp. subtilis str. 168] gi|221312496|ref|ZP_03594301.1| hypothetical protein BsubsN3_02029 [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221321694|ref|ZP_03602988.1| hypothetical protein BsubsS_02054 [Bacillus subtilis subsp. subtilis str. SMY] gi|321314029|ref|YP_004206316.1| cystine ABC transporter permease [Bacillus subtilis BSn5] gi|1175700|sp|P42200|TCYB_BACSU RecName: Full=L-cystine transport system permease protein tcyB gi|666982|emb|CAA54725.1| putative membrane spanning subunit [Bacillus subtilis subsp. subtilis str. JH642] gi|1805431|dbj|BAA08993.1| yckJ [Bacillus subtilis] gi|2632646|emb|CAB12154.1| cystine ABC transporter (permease) [Bacillus subtilis subsp. subtilis str. 168] gi|291482759|dbj|BAI83834.1| hypothetical protein BSNT_00640 [Bacillus subtilis subsp. natto BEST195] gi|320020303|gb|ADV95289.1| cystine ABC transporter (permease) [Bacillus subtilis BSn5] Length = 234 Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 67/209 (32%), Positives = 113/209 (54%), Gaps = 21/209 (10%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 + SF+ G++L+L T L+R + + + +Y+S I G P LV + + + L Sbjct: 40 ILSFIFGMILALI-TALARMSKVRPLRWVFSVYVSA--IRGTPLLVQLFIIFYL------ 90 Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 FN T+ P F S IA S A+ +EI+R+ +++VP+GQ EA +G+TH+K Sbjct: 91 FPAFNV----TLDP-FPSAVIAFSLNVGAYASEIIRASILSVPKGQWEAGYTIGMTHQKT 145 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI- 369 V+LPQA R IPPL++ +++L+K++SLA + A+L I + I +I I Sbjct: 146 LFRVILPQAFRVSIPPLSNTFISLIKDTSLASQILVAELFRKAQEIGARNLDQILVIYIE 205 Query: 370 -----WMFIYLSLSIMIALFMNRLNAKIA 393 W+ +L LS++ + RL+ +A Sbjct: 206 AAFIYWIICFL-LSLVQHVIERRLDRYVA 233 >gi|330684943|gb|EGG96623.1| ABC transporter, permease protein [Staphylococcus epidermidis VCU121] Length = 239 Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 53/155 (34%), Positives = 95/155 (61%), Gaps = 10/155 (6%) Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248 I + +FVLG++++LF T L R K K + +Y+S +I G P +V + + + + Sbjct: 34 ITLVTFVLGLIIALF-TALMRISTSKILKGIARVYVS--IIRGTPMIVQL---FIIFYGI 87 Query: 249 PVLGQF---NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305 P LG+ + T++P ++ I LS A+ +EI+R G+I++P+GQ EAA ++G+ Sbjct: 88 PELGRLLTNDADNQWTLAPVIAAI-IGLSLNVGAYASEIIRGGIISIPKGQTEAAYSIGM 146 Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340 +R+ + ++LPQA+R IP L + +L L+K++SL Sbjct: 147 NYRQTVQRIILPQAIRVSIPALGNTFLGLIKDTSL 181 >gi|324115108|gb|EGC09073.1| ABC transporter [Escherichia fergusonii B253] Length = 506 Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 62/206 (30%), Positives = 106/206 (51%), Gaps = 14/206 (6%) Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251 FS VLG +L+L A + R + +YI +L +P LVL+ Y L P L Sbjct: 34 FSIVLGFILAL-AKQSPRKLFNTPAR----IYI--WLFRSIPLLVLLIFVYNLPQAMPSL 86 Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311 S ++ F + IA+ AA+IAEI R GL+++P+GQ EAA ALG+ + Sbjct: 87 A-------SILNDPFRAGLIAMVLCEAAYIAEIHRGGLLSIPKGQSEAARALGMRYAGTQ 139 Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371 V++PQA+R +P L ++Y+ ++K SSL + +++ VG + +Q +E + Sbjct: 140 WRVVIPQALRVALPALANEYIAIVKLSSLVSVISLTEILMVGQRLYSQNFLVMETMAAVA 199 Query: 372 FIYLSLSIMIALFMNRLNAKIALKEK 397 F Y+ + + + RL + + ++ Sbjct: 200 FYYVFIVTVFDFLLKRLEKYLEVTQR 225 >gi|239827640|ref|YP_002950264.1| polar amino acid ABC transporter inner membrane subunit [Geobacillus sp. WCH70] gi|239807933|gb|ACS24998.1| polar amino acid ABC transporter, inner membrane subunit [Geobacillus sp. WCH70] Length = 219 Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 59/217 (27%), Positives = 109/217 (50%), Gaps = 37/217 (17%) Query: 188 KIFVFS----FVLGIVLSLFATRLSR--------HFHEKTGKALPLLYISTFLIFGLPTL 235 KI VF+ FVLG++L+L ++ R + + PL+ + FG+P L Sbjct: 24 KIVVFAVLLGFVLGVILALM--KIGRMKVLTWFADAYTSVFRGTPLVLQLVLIYFGIPQL 81 Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295 + + F + IA +AA+++EI+R+G++AV +G Sbjct: 82 TGVEID-----------------------AFPAAVIAFGLNSAAYVSEIIRAGILAVDKG 118 Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355 Q EAA+ALG+ ++ R ++LPQA+++I+P L ++++ L K S++ +G D++ Sbjct: 119 QREAALALGVPYKLMMRDIILPQALKNILPALMNEFITLTKESAVVTVIGAMDVMRRAYI 178 Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 + Q + IE +LI IY L +++ L L ++ Sbjct: 179 VGGQVYRYIEPLLIAGLIYYVLVMLLTLLGKALEGRL 215 >gi|116672451|ref|YP_833384.1| polar amino acid ABC transporter inner membrane subunit [Arthrobacter sp. FB24] gi|116612560|gb|ABK05284.1| amino acid ABC transporter membrane protein, PAAT family [Arthrobacter sp. FB24] Length = 352 Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 65/205 (31%), Positives = 117/205 (57%), Gaps = 25/205 (12%) Query: 194 FVLGIVLSLFATRLSRHFHEKTGKALPLL----YISTFLIFGLPTLVLIALKYQLHF--D 247 FVLG +L+L RLS A PLL + +++ P LV + L Y L + + Sbjct: 118 FVLGFILALM--RLS---------ASPLLVSVSWTFSWIFRSTPLLVQMLLWYNLGYLYE 166 Query: 248 KPVLG------QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301 K LG +F + +T+ +F + + L+ AA+ AEI+R G+++V +GQ+EAA Sbjct: 167 KISLGIPFTDVRFFEVQTTTLISQFAAAVLGLTLNQAAYSAEIIRGGILSVDQGQLEAAA 226 Query: 302 ALGL-THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 ALG+ R++TR+VL PQAMR+I+P ++ + L+K +S+ + +++L I N+T Sbjct: 227 ALGIPAWRRSTRIVL-PQAMRAILPTAFNEIIGLVKGTSIVYVLAYSELFYTVQVIYNRT 285 Query: 361 GQAIEIILIWMFIYLSLSIMIALFM 385 Q + ++L+ Y+ ++ ++++F Sbjct: 286 QQVLPLLLVATLWYVVITSVLSVFQ 310 >gi|317153669|ref|YP_004121717.1| polar amino acid ABC transporter inner membrane subunit [Desulfovibrio aespoeensis Aspo-2] gi|316943920|gb|ADU62971.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio aespoeensis Aspo-2] Length = 335 Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 60/195 (30%), Positives = 101/195 (51%), Gaps = 5/195 (2%) Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256 GIVL LF T L+R K + YI LI G P LV + + Y + ++ Sbjct: 143 GIVLGLF-TGLARISSNPCLKWSAITYIE--LIRGSPLLVQLLIAY--YVIGTLINNLLV 197 Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316 G P +L+ + A++AEIVR+G+ ++ +GQ EAA +LG+T A R ++L Sbjct: 198 NAGLPQVPGMWFGIASLAIFAGAYVAEIVRAGIQSIHKGQSEAARSLGMTKAMAMRKIIL 257 Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376 PQA R I+PPL Q+++L+K+SSL + +L + + E+ + +YL Sbjct: 258 PQAFRRILPPLAGQFISLIKDSSLLGVIAIRELTKATREAVTTSLMPYELYFVCGLMYLL 317 Query: 377 LSIMIALFMNRLNAK 391 ++ +++F+ L + Sbjct: 318 VTFSLSMFVQYLEKR 332 >gi|229590086|ref|YP_002872205.1| glutamine high-affinity transport system; membrane component [Pseudomonas fluorescens SBW25] gi|229361952|emb|CAY48852.1| glutamine high-affinity transport system; membrane component [Pseudomonas fluorescens SBW25] Length = 220 Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 64/208 (30%), Positives = 113/208 (54%), Gaps = 22/208 (10%) Query: 193 SFVLGIVLSL---FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249 S +G V+ L FA LSRH K + L +Y++ +I P LVLI L Y F P Sbjct: 31 SIAIGCVIGLMMAFAM-LSRH---KALRVLASVYVT--VIRNTPILVLILLIY---FALP 81 Query: 250 VLG-QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308 LG + + I P F+ I LS Y A++ E+ R+GL+ +P+G EA +A+GL Sbjct: 82 SLGIRLDKI------PSFI---ITLSLYAGAYLTEVFRAGLLNIPKGLREAGLAIGLGEW 132 Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368 + + +P +R+++P L++ +++L K++SLA A+ +L I ++ + IE L Sbjct: 133 RIRAYITVPVMLRNVLPALSNNFISLFKDTSLAAAIAVPELTYYARKINVESYRVIETWL 192 Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKE 396 + +Y++ +IA+ + L ++A++ Sbjct: 193 VTTALYVAACYLIAMLLRYLEQRLAIRR 220 >gi|255324615|ref|ZP_05365732.1| ABC-type amino acid transport system, permease component [Corynebacterium tuberculostearicum SK141] gi|311740518|ref|ZP_07714345.1| amino acid ABC superfamily ATP binding cassette transporter [Corynebacterium pseudogenitalium ATCC 33035] gi|255298521|gb|EET77821.1| ABC-type amino acid transport system, permease component [Corynebacterium tuberculostearicum SK141] gi|311304038|gb|EFQ80114.1| amino acid ABC superfamily ATP binding cassette transporter [Corynebacterium pseudogenitalium ATCC 33035] Length = 317 Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 50/130 (38%), Positives = 78/130 (60%), Gaps = 4/130 (3%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + L AA++AEIVRSG+ +VP GQ EA+ ALG++ R +LPQAMR IIPP ++ Sbjct: 160 MGLGLNEAAYMAEIVRSGITSVPEGQKEASKALGMSWWMTMRRTVLPQAMRIIIPPTGNE 219 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQT-GQAIEIILI---WMFIYLSLSIMIALFMN 386 +++LLK SSL VA+ + + + T I+ Q I ++L+ W + SL ++ F+ Sbjct: 220 FISLLKTSSLVVAIPYTEEIFGRSTDISAALFQPIPLLLVAASWYLVVTSLLMVGQYFLE 279 Query: 387 RLNAKIALKE 396 R + A +E Sbjct: 280 RRFERGATRE 289 >gi|310816974|ref|YP_003964938.1| glutamate/glutamine/aspartate/asparagine transport system permeaseprotein BztC [Ketogulonicigenium vulgare Y25] gi|308755709|gb|ADO43638.1| glutamate/glutamine/aspartate/asparagine transport system permeaseprotein BztC [Ketogulonicigenium vulgare Y25] Length = 457 Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 44/113 (38%), Positives = 71/113 (62%), Gaps = 8/113 (7%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I ++ ++AA+IAE+VR GL A+P+GQ EAA ALGL + +A RL++LPQA++ IP + + Sbjct: 328 IMVTLFSAAYIAEVVRGGLAAIPKGQYEAADALGLDYWRAMRLIILPQALKISIPGIVNT 387 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 ++ L K+++L V +G D V++ +I T W IY L + + L Sbjct: 388 FIGLFKDTTLVVFIGMMDPVNLLNSIRANTA--------WNGIYWELFLFVGL 432 >gi|149181761|ref|ZP_01860252.1| amino acid ABC transproter, permease [Bacillus sp. SG-1] gi|148850502|gb|EDL64661.1| amino acid ABC transproter, permease [Bacillus sp. SG-1] Length = 215 Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 44/131 (33%), Positives = 79/131 (60%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F S+ + L+ + A+IAEI R + ++ +GQMEA +LG+++ R ++LPQA R +P Sbjct: 85 FWSVVLGLAFHNGAYIAEIFRGTIQSIDKGQMEAGRSLGMSNGLTMRRIILPQAFRRALP 144 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PL +Q++ LK+SSLA +G +L SV T+ + + +LI YL L + ++ + Sbjct: 145 PLGNQFIIALKDSSLASFIGMYELFSVATTLGSNNFDYMTYLLIVAVYYLVLVLFFSVIV 204 Query: 386 NRLNAKIALKE 396 N + +++L + Sbjct: 205 NFVEKRMSLSD 215 >gi|209546625|ref|YP_002278543.1| polar amino acid ABC transporter inner membrane protein [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209537869|gb|ACI57803.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 235 Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 61/166 (36%), Positives = 91/166 (54%), Gaps = 17/166 (10%) Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFN--FIGGSTVSP----EFMSLY--------IALSC 275 FG P L+A H + P L Q + G T+ P E++S++ I L Sbjct: 54 FGDP---LVAAYVSYHRNVPTLVQLMLWYFGIFTLMPSGLGEWLSVHNAEAIFAVIGLGL 110 Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335 AA+ +E +RSG+ +V GQMEAA ALG + A R V++PQ +R+ +PPL + ++L Sbjct: 111 CQAAYFSEDLRSGVRSVGPGQMEAARALGHGYVSAMRFVIMPQGVRNALPPLINHSVSLF 170 Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 KNSSLAV +G ++L I N + + EI LI +YL S++I Sbjct: 171 KNSSLAVIIGASELTHAVKEIENLSFRTFEIYLIGTVLYLFFSLVI 216 >gi|146278535|ref|YP_001168694.1| polar amino acid ABC transporter, inner membrane subunit [Rhodobacter sphaeroides ATCC 17025] gi|145556776|gb|ABP71389.1| polar amino acid ABC transporter, inner membrane subunit [Rhodobacter sphaeroides ATCC 17025] Length = 392 Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 38/78 (48%), Positives = 57/78 (73%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I ++ + AA+IAE++R GL A+PRGQ EAA ALGL + +A RL++LPQA++ IP + S Sbjct: 262 IMVTLFAAAYIAEVIRGGLAALPRGQYEAADALGLDYWRAQRLIILPQALKISIPGIVST 321 Query: 331 YLNLLKNSSLAVAVGFAD 348 ++ L K+++L V VG D Sbjct: 322 FIGLFKDTTLVVFVGLLD 339 >gi|290963274|ref|YP_003494456.1| amino acid permease [Streptomyces scabiei 87.22] gi|260652800|emb|CBG75933.1| putative amino acid permease [Streptomyces scabiei 87.22] Length = 296 Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 62/164 (37%), Positives = 94/164 (57%), Gaps = 21/164 (12%) Query: 196 LGIVLS-----LFAT-RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249 LGIVL+ LFAT R+S H T +P + F +P L+LI + Sbjct: 78 LGIVLAGSFGLLFATARMSEH----TWIRVPAAAVVEFF-RAVPLLLLIFCAF------- 125 Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309 G F G TVSP F ++ + L+ Y + IAE +R+G+ ++P+GQ EAA ALG+ + Sbjct: 126 -FGSFALTG-QTVSP-FTAVVLGLTLYNGSVIAETLRAGVNSLPKGQAEAARALGMPKSQ 182 Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353 LVL+PQA+ +++P + SQ++ LLK+S+L VG+ +LV G Sbjct: 183 TMALVLMPQAIVAMMPAIVSQFVVLLKDSALGFIVGYDELVDRG 226 >gi|300697544|ref|YP_003748205.1| amino acid ABC transporter transmembrane protein [Ralstonia solanacearum CFBP2957] gi|299074268|emb|CBJ53813.1| amino acid ABC transporter transmembrane protein [Ralstonia solanacearum CFBP2957] Length = 233 Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 57/151 (37%), Positives = 83/151 (54%), Gaps = 14/151 (9%) Query: 245 HFDKPVLGQ--FNFIGGSTVSP------------EFMSLYIALSCYTAAFIAEIVRSGLI 290 H + P L Q F + G ST+ P E + +AL AA+ +E +RSGL Sbjct: 66 HCNVPTLVQLMFWYFGISTLFPLPMLDWLADHHSEAVFSIVALGLCQAAYFSEDLRSGLR 125 Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 A+P GQ EAA ALG + R VL+PQA+R+ +P L + ++L KNSSLA+A+G +L Sbjct: 126 AIPPGQEEAARALGNSFIGTLRYVLMPQAVRNALPALINHSVSLFKNSSLAMAIGVTELT 185 Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 I N + +A E L+ +YL S++I Sbjct: 186 HAVKEIENTSFRAFESYLLATVVYLGFSLVI 216 >gi|322419252|ref|YP_004198475.1| polar amino acid ABC transporter inner membrane subunit [Geobacter sp. M18] gi|320125639|gb|ADW13199.1| polar amino acid ABC transporter, inner membrane subunit [Geobacter sp. M18] Length = 261 Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 45/130 (34%), Positives = 81/130 (62%), Gaps = 4/130 (3%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P +S IA++ A++ E+VR+G+ ++ +GQ EAA++LG+ R+A V+LPQA++ I Sbjct: 129 PAILSAIIAMAVCYGAYMGEVVRAGIESIAKGQREAALSLGMNGRQAMIHVILPQAVKVI 188 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE----IILIWMFIYLSLSI 379 +PP+ ++++ LLK+SSL + ADL+ G +++ E I LI++ I L S Sbjct: 189 LPPVGNEFIALLKDSSLVSIIAVADLLRRGREYASESFTYFETYTVIALIYLIITLFFSK 248 Query: 380 MIALFMNRLN 389 +I + R++ Sbjct: 249 IIGVMEERVS 258 Score = 49.7 bits (117), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 24/68 (35%), Positives = 40/68 (58%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151 G TF + ++ A +IG + G GR+S N+ +YVE+ R IP LV IF++Y + Sbjct: 62 GIAVTFQVTLGAILLAIVIGLVTGLGRISKNRFFNGAASLYVEIIRGIPLLVQIFYIYYA 121 Query: 152 VLSVLPIP 159 + +V+ +P Sbjct: 122 LGTVVKVP 129 >gi|213966207|ref|ZP_03394392.1| glutamate ABC transport system, permease protein [Corynebacterium amycolatum SK46] gi|213951142|gb|EEB62539.1| glutamate ABC transport system, permease protein [Corynebacterium amycolatum SK46] Length = 318 Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 50/161 (31%), Positives = 92/161 (57%), Gaps = 8/161 (4%) Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291 +P LVL+ Y + F L N++G F ++ L+ Y + I E +RSG+ + Sbjct: 122 IPVLVLMLFAYSV-FAIWQLFPSNYLG-------FAAVVFGLTMYNGSVIGETLRSGIES 173 Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 +P+GQ EAAIALGL+HR+ +LLPQA+ +++P + SQ + LK+S+L +G+ ++V Sbjct: 174 LPKGQREAAIALGLSHRQTMVTILLPQAVAAMLPAIISQMVIALKDSALGYMIGYVEVVR 233 Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 G + G I +++ I ++++ +A R+ +++ Sbjct: 234 SGRQLGEYYGAMIPSLVVVAIILIAINFGLANLAERIESQL 274 Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 33/87 (37%), Positives = 50/87 (57%), Gaps = 1/87 (1%) Query: 64 LSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK 123 L+++ FE ++ + +++ T IL G V+T A ++ A +IG L+G GRLS Sbjct: 48 LADKGQFESNKWSF-FLESTTWTTYILPGLVSTIIAAVVSIVLALVIGALLGVGRLSPIA 106 Query: 124 LVAWICRVYVEVFRNIPPLVVIFFLYK 150 V W+C V VE FR IP LV++ F Y Sbjct: 107 PVRWLCSVIVEFFRAIPVLVLMLFAYS 133 >gi|254512979|ref|ZP_05125045.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Rhodobacteraceae bacterium KLH11] gi|221532978|gb|EEE35973.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Rhodobacteraceae bacterium KLH11] Length = 293 Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 36/94 (38%), Positives = 64/94 (68%) Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315 F G P +S I L+ + +AF+ EIVR+G+ ++P+GQ EAA ++G++ + R V+ Sbjct: 154 FFGEMRRFPSLISGVIVLALFESAFVGEIVRAGIQSIPKGQREAARSIGMSRLQELRYVV 213 Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349 LPQAM+ ++PPL +Q+++L+K+SS+ + +L Sbjct: 214 LPQAMKKVVPPLANQFISLIKDSSILSLISVQEL 247 >gi|59712141|ref|YP_204917.1| amino-acid transporter permease [Vibrio fischeri ES114] gi|59480242|gb|AAW86029.1| predicted amino-acid transporter permease [Vibrio fischeri ES114] Length = 365 Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 36/83 (43%), Positives = 60/83 (72%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I + ++AA++AE+VR GL A+P+GQ EAA ALGL + K RL++LPQA++ IP + + Sbjct: 235 IGVVLFSAAYMAEVVRGGLQAIPKGQYEAADALGLGYWKKMRLIILPQALKITIPSIVNT 294 Query: 331 YLNLLKNSSLAVAVGFADLVSVG 353 ++ L K++SL + +G D++ +G Sbjct: 295 FIGLFKDTSLVLIIGMFDVLGIG 317 >gi|110347171|ref|YP_665989.1| polar amino acid ABC transporter, inner membrane subunit [Mesorhizobium sp. BNC1] gi|110283282|gb|ABG61342.1| L-aspartate ABC transporter membrane protein / L-glutamate ABC transporter membrane protein [Chelativorans sp. BNC1] Length = 230 Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 46/163 (28%), Positives = 88/163 (53%), Gaps = 3/163 (1%) Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGST--VSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291 +L L+ + + +F P +G + IG S F S I + + AA+ +EI+R+G+ + Sbjct: 67 SLPLVLVIFWFYFLVPYIGAW-LIGASQPIAVGAFASALITFTLFEAAYFSEIMRAGIQS 125 Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 +PRGQ A A+GL + + ++LPQA R+++P + +Q + L +++SL + D + Sbjct: 126 IPRGQTGAGYAIGLNYSQVMGYIVLPQAFRNMLPVMLTQTIILFQDTSLVYVISLTDFLG 185 Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394 + + G+ +E+ L IY +S + + RL A+ A+ Sbjct: 186 AASKVAQRDGRLVEMYLFAAIIYFVISFAASFLVKRLEARTAI 228 >gi|327470644|gb|EGF16100.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK330] Length = 226 Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 42/118 (35%), Positives = 71/118 (60%), Gaps = 8/118 (6%) Query: 243 QLHFDKPVLGQF-------NFIGGSTVSPE-FMSLYIALSCYTAAFIAEIVRSGLIAVPR 294 + + + P+L QF + T+ P + + + + Y A+IAE++RSG+ ++PR Sbjct: 63 EFYQNTPLLVQFVIVFYGLPLVSNYTIMPSIYWTAVLCVGLYHGAYIAEVIRSGIQSIPR 122 Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352 GQ EAA++ G T+ + R ++LPQA R I+PPL +Q +NL+KN+S + DL+ V Sbjct: 123 GQTEAALSQGFTYVETMRYIILPQAFRIILPPLINQVVNLIKNTSTVAIISGMDLMFV 180 >gi|325000380|ref|ZP_08121492.1| polar amino acid ABC transporter, inner membrane subunit [Pseudonocardia sp. P1] Length = 306 Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 43/123 (34%), Positives = 74/123 (60%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I LS +A++AEI+R+G++ V GQ EAA A+G T + ++LPQAMR IIPP SQ Sbjct: 171 IGLSLVQSAYMAEIIRAGILGVDHGQREAASAMGFTPAQTFFRIILPQAMRVIIPPSGSQ 230 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++ ++K ++L + DL+ I NQT + + ++++ YL++ ++ + RL Sbjct: 231 FITVVKGTALVSVIAMNDLLHSVQVIYNQTYEIVPMLIVACLWYLTVVTLLTIGQRRLER 290 Query: 391 KIA 393 + A Sbjct: 291 RFA 293 Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust. Identities = 31/88 (35%), Positives = 47/88 (53%), Gaps = 3/88 (3%) Query: 81 SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140 ++ + ++L G T LA M+ +++G + A +LS W VYV VFR IP Sbjct: 67 AEHLFDPSVLRGLGTTMLLAVLAMLIGSVLGGALAAAQLSDFGPTRWAATVYVGVFRGIP 126 Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFG 168 PLV + F + L+ L +P SI +PFG Sbjct: 127 PLVQLIFWFN--LAYL-LPRISIGVPFG 151 >gi|226366162|ref|YP_002783945.1| glutamate ABC transporter permease protein [Rhodococcus opacus B4] gi|226244652|dbj|BAH55000.1| glutamate ABC transporter permease protein [Rhodococcus opacus B4] Length = 299 Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 62/226 (27%), Positives = 113/226 (50%), Gaps = 35/226 (15%) Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI---FGLPTLVLI 238 T+ A VF+ +LG +L + RLS H P+ +++ ++ +P L+L+ Sbjct: 73 TLVAAAVSIVFALILGAILGI--GRLSDHR--------PVRWVAGGIVELFRAIPVLILM 122 Query: 239 ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSC-------YTAAFIAEIVRSGLIA 291 YQL + V F S Y+AL+ Y + IAEIVR+G+ + Sbjct: 123 IFSYQLFAEYEV---------------FKSKYLALAAVIVGLTLYNGSVIAEIVRAGINS 167 Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 +P+GQ EAA+ALG+ + R +LLPQA+ +++P + SQ + LK+S+L +G+ ++V Sbjct: 168 LPKGQSEAAMALGMRKSQVMRTILLPQAVTAMLPAIISQMVVALKDSALGYLIGYVEVVR 227 Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 G + G + +++ I + L+ + + R+ ++ K Sbjct: 228 SGQQLGAFYGNYLPALIVVAIIMIILNYTLTVVATRVEKRLRAARK 273 Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 34/98 (34%), Positives = 55/98 (56%), Gaps = 8/98 (8%) Query: 59 LGIGFLSERAGFEIDQGIV------PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGT 112 LGIG+L A D+G + P+T +S+ T ++ G T A ++ A I+G Sbjct: 32 LGIGYLVYAA--LDDKGQLTAAKWEPFTESTSWTTYLIPGIRGTLVAAAVSIVFALILGA 89 Query: 113 LVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYK 150 ++G GRLS ++ V W+ VE+FR IP L+++ F Y+ Sbjct: 90 ILGIGRLSDHRPVRWVAGGIVELFRAIPVLILMIFSYQ 127 >gi|86360227|ref|YP_472116.1| amino acid ABC transporter permease [Rhizobium etli CFN 42] gi|86284329|gb|ABC93389.1| probable amino acid ABC transporter, permease protein [Rhizobium etli CFN 42] Length = 218 Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 47/111 (42%), Positives = 69/111 (62%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I L AA+ +E +RSG+ +V GQMEAA ALG + A R V++PQ +R+ +PPL + Sbjct: 89 IGLGLCQAAYFSEDLRSGVRSVGPGQMEAARALGHGYVSAMRFVIMPQGVRNALPPLINH 148 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 ++L KNSSLAV +G ++L I N + + EI LI +YL S++I Sbjct: 149 SVSLFKNSSLAVVIGASELTHAVKEIENLSFRTFEIYLIGTVLYLFFSLVI 199 >gi|315124439|ref|YP_004066443.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|315018161|gb|ADT66254.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Campylobacter jejuni subsp. jejuni ICDCCJ07001] Length = 233 Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 59/175 (33%), Positives = 96/175 (54%), Gaps = 16/175 (9%) Query: 221 LLYISTF---LIFGLPTLVLIALKYQLHFDKPVLGQFN-FIGGSTVSPEFMSLYIALSCY 276 L ++STF LI G P LV + L Y + + LG N ++ G I LSC+ Sbjct: 68 LRFLSTFYIELIRGTPLLVQVLLMYYIIANN--LGLDNRYVAGV----------IILSCF 115 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 +A ++AEI R+G++++ Q+E+A ALGL + V+ PQA+++I+ PL+ Q+ NL+K Sbjct: 116 SATYLAEIFRAGILSISISQLESARALGLKEMQVFAYVIFPQALKNILAPLSGQFANLIK 175 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 +SSL + +L I + T +E +I YL L++ I++F L K Sbjct: 176 DSSLLSVIAVNELTQSAQEINSYTFATLEAYVILAITYLILTLPISIFSRYLERK 230 Score = 37.7 bits (86), Expect = 2.8, Method: Compositional matrix adjust. Identities = 21/82 (25%), Positives = 42/82 (51%) Query: 68 AGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAW 127 F I +++ ++Y L GF+NT ++F ++ + I+G + A LS+ + + Sbjct: 11 CSFSISAYHFDFSAIATYKEKFLQGFLNTLIISFFSLLLSIILGGVFCAFSLSSIVFLRF 70 Query: 128 ICRVYVEVFRNIPPLVVIFFLY 149 + Y+E+ R P LV + +Y Sbjct: 71 LSTFYIELIRGTPLLVQVLLMY 92 >gi|221317432|ref|ZP_03598726.1| hypothetical protein BsubsJ_02043 [Bacillus subtilis subsp. subtilis str. JH642] Length = 234 Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 67/209 (32%), Positives = 113/209 (54%), Gaps = 21/209 (10%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 + SF+ G++L+L T L+R + + + +Y+S I G P LV + + + L Sbjct: 40 ILSFIFGMILALI-TALARMSKVRPLRWVFSVYVSA--IRGTPLLVQLFIIFYL------ 90 Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 FN T+ P F S IA S A+ +EI+R+ +++VP+GQ EA +G+TH+K Sbjct: 91 FPAFNV----TLDP-FPSAVIAFSLNVGAYASEIIRASILSVPKGQWEAGYTIGMTHQKT 145 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI- 369 V+LPQA R IPPL++ +++L+K++SLA + A+L I + I +I I Sbjct: 146 LFRVILPQAFRVSIPPLSNTFISLIKDTSLASQILVAELFRKAQEIGARNLDQILVIYIE 205 Query: 370 -----WMFIYLSLSIMIALFMNRLNAKIA 393 W+ +L LS++ + RL+ +A Sbjct: 206 AAFIYWIICFL-LSLVQHVIERRLDRYVA 233 >gi|57504978|ref|ZP_00370930.1| amino acid ABC transporter, permease protein [Campylobacter coli RM2228] gi|305432022|ref|ZP_07401189.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Campylobacter coli JV20] gi|57019250|gb|EAL55956.1| amino acid ABC transporter, permease protein [Campylobacter coli RM2228] gi|304445106|gb|EFM37752.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Campylobacter coli JV20] Length = 250 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 59/214 (27%), Positives = 110/214 (51%), Gaps = 37/214 (17%) Query: 150 KSVLSVLPIPDHSIVLPFGM--FLN--NRGLSFPT---LTMDTNAKIFVFSFVLGIVLSL 202 + +LS + D S PF + FL+ + G +F + T++ + + + V G + + Sbjct: 12 RQLLSSWGLYDESSTNPFAIWKFLDALDNGDAFISGFIYTLEVSILALLIAIVFGTIGGV 71 Query: 203 FAT------RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256 AT R + + + +PL+ FL F LP L +H D +G Sbjct: 72 MATSKIKILRAYTRVYVELFQNIPLVIQIFFLYFALPGL-------GIHLDIFTIG---- 120 Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316 + + Y A+++E+VRSG+++VPRGQ EA+ + G T+ + R +++ Sbjct: 121 -------------VLGIGAYHGAYVSEVVRSGILSVPRGQFEASASQGFTYVQQMRYIIV 167 Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 PQ ++ I+PP+T+Q +NL+KN+S+ + +G A+L+ Sbjct: 168 PQTIKIILPPMTNQMVNLIKNTSVLLIIGGAELM 201 Score = 44.7 bits (104), Expect = 0.028, Method: Compositional matrix adjust. Identities = 24/64 (37%), Positives = 38/64 (59%) Query: 86 ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145 A + GF+ T ++ ++ A + GT+ G S K++ RVYVE+F+NIP ++ I Sbjct: 41 GDAFISGFIYTLEVSILALLIAIVFGTIGGVMATSKIKILRAYTRVYVELFQNIPLVIQI 100 Query: 146 FFLY 149 FFLY Sbjct: 101 FFLY 104 >gi|255029025|ref|ZP_05300976.1| amino acid ABC transporter, permease protein [Listeria monocytogenes LO28] Length = 149 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 38/91 (41%), Positives = 67/91 (73%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+S IALS +AA++AEI+R+G+ AV +GQMEAA +LG+T + R ++LPQA+++I+P Sbjct: 19 FVSGCIALSLNSAAYVAEIIRAGISAVNKGQMEAARSLGMTQGASMRYIILPQAVKNILP 78 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356 L ++++ ++K SS+ +G +L+ + G + Sbjct: 79 ALGNEFVTVIKESSIVSVIGVTELMFMTGVV 109 >gi|222087817|ref|YP_002546355.1| ABC transporter membrane spanning protein (opine) [Agrobacterium radiobacter K84] gi|221725265|gb|ACM28421.1| ABC transporter membrane spanning protein (opine) [Agrobacterium radiobacter K84] Length = 278 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 65/204 (31%), Positives = 101/204 (49%), Gaps = 17/204 (8%) Query: 194 FVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ 253 FV+ + L +RH +G L I T++ G P LV + L Y LGQ Sbjct: 32 FVVSVPLGFLRASSNRHL---SGCVL----IYTYVFRGTPLLVQLFLIYY------GLGQ 78 Query: 254 FNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309 + S P F +ALS +AA+ E+ R+G+ AVPRG +EAA ALGL+ Sbjct: 79 LEIVRNSMFWPLLREPFWCALLALSLNSAAYTTEVFRAGIQAVPRGVVEAAQALGLSRIM 138 Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369 RL++ P A R+++P ++ + +LK SSLA V ++ + ++++T EI L Sbjct: 139 QIRLIIFPLAFRTVLPSYANEVIGMLKASSLASTVTLLEITGLARRMVSETFAPYEIFLA 198 Query: 370 WMFIYLSLSIMIALFMNRLNAKIA 393 IYL L+ +I+ L +A Sbjct: 199 AGLIYLFLTFVISKLFQMLETHLA 222 >gi|241206848|ref|YP_002977944.1| polar amino acid ABC transcriptional regulator inner membrane protein [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240860738|gb|ACS58405.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 226 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 61/203 (30%), Positives = 109/203 (53%), Gaps = 14/203 (6%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 + SFV G+ L L AT ++R F A+ Y+ ++I G P LV + + + + P Sbjct: 28 LLSFVFGLALGL-ATAIARLFGPMPLSAVARFYV--WVIRGTPLLVQL---FVIFYGLPS 81 Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 LG + F + I + A+ +EI+R+ + +VP+GQ EAA ++G++ R+A Sbjct: 82 LG--------ILLDAFPAALIGFTLNIGAYSSEIIRAVISSVPKGQWEAAYSIGMSWRQA 133 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370 +LPQA R +PPL++ +++L+K++SLA A+ +L I+ T + + + + Sbjct: 134 MSRTILPQAARVAVPPLSNTFISLVKDTSLAAAITVPELFQAAQRIVATTYEPLILYIEA 193 Query: 371 MFIYLSLSIMIALFMNRLNAKIA 393 IYL LS +++ RL + A Sbjct: 194 ALIYLVLSSVLSQLQVRLERRFA 216 >gi|300313150|ref|YP_003777242.1| glutamate/aspartate ABC transporter permease [Herbaspirillum seropedicae SmR1] gi|300075935|gb|ADJ65334.1| ABC-type glutamate/aspartate transport system, permease component protein [Herbaspirillum seropedicae SmR1] Length = 249 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 51/128 (39%), Positives = 79/128 (61%), Gaps = 1/128 (0%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 F++ +AL +T++ +A V +G+ A+PRGQ A ALGLT + R VLLP A R II Sbjct: 106 SFVTATLALGFFTSSRVAVQVTTGIQALPRGQRMAGAALGLTPVQTYRYVLLPMAFRIII 165 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 P LT+++ ++KNSS+A+ +G +L + ++ T Q E + IY+ +S+ IALF Sbjct: 166 PALTNEFAAIIKNSSVALTIGLVELTAATYSMREFTFQTFEALTGATIIYVIISV-IALF 224 Query: 385 MNRLNAKI 392 M RL K+ Sbjct: 225 MARLLEKV 232 Score = 45.1 bits (105), Expect = 0.020, Method: Compositional matrix adjust. Identities = 36/102 (35%), Positives = 47/102 (46%), Gaps = 12/102 (11%) Query: 85 YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144 Y +L G T A I A I+GT+ G R + V I YVE+FRNIP LV Sbjct: 20 YIDTLLAGLKWTLATAACAWIMALILGTIFGTLRTTTKPWVVRIANGYVELFRNIPLLVQ 79 Query: 145 IFFLYKSVLSVLP---------IPDHSIV---LPFGMFLNNR 174 +F Y + +LP +PD S V L G F ++R Sbjct: 80 MFLWYFVMPELLPAFIGDWIKSLPDASFVTATLALGFFTSSR 121 >gi|37679739|ref|NP_934348.1| ABC-type amino acid transport system, permease component [Vibrio vulnificus YJ016] gi|37198484|dbj|BAC94319.1| ABC-type amino acid transport system, permease component [Vibrio vulnificus YJ016] Length = 372 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 37/98 (37%), Positives = 66/98 (67%) Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315 F+ + + + + I + ++AA++AE+VR GL A+P+GQ EAA ALGLT+ K L++ Sbjct: 227 FLSEGSETDKLIRALIGVVMFSAAYMAEVVRGGLQAIPKGQYEAADALGLTYWKKMGLII 286 Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353 LPQA++ IP + + ++ L K++SL + +G D++ +G Sbjct: 287 LPQALKITIPSIVNTFIGLFKDTSLVLIIGMFDVLGIG 324 >gi|237802191|ref|ZP_04590652.1| amino acid ABC transporter permease [Pseudomonas syringae pv. oryzae str. 1_6] gi|331025048|gb|EGI05104.1| amino acid ABC transporter permease [Pseudomonas syringae pv. oryzae str. 1_6] Length = 229 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 67/191 (35%), Positives = 102/191 (53%), Gaps = 17/191 (8%) Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239 TLT++ A + VL I L + R SR + + +ALP YI F G P LV + Sbjct: 18 TLTLELVAIAVIAGLVLAIPLGI--ARASRLW---SVRALPYAYI--FFFRGTPLLVQLF 70 Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295 L Y L QF+ + + P F I ++ +TAA+IAEI+R + AVP G Sbjct: 71 LVYY------GLAQFDVVRQGPLWPYLRDPFWCAVITMTLHTAAYIAEILRGAIQAVPVG 124 Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355 ++EAA ALG++ KA ++LP+A R +P +++ + +LK S+LA V +L + T Sbjct: 125 EVEAARALGMSKWKALFYIVLPRATRIGLPAYSNEVILMLKASALASTVTLLELTGMART 184 Query: 356 IINQTGQAIEI 366 II +T +EI Sbjct: 185 IIARTYMPVEI 195 >gi|254229977|ref|ZP_04923378.1| ABC-type amino acid transport system, permease component [Vibrio sp. Ex25] gi|262392807|ref|YP_003284661.1| putative amino acid ABC transporter permease [Vibrio sp. Ex25] gi|151937479|gb|EDN56336.1| ABC-type amino acid transport system, permease component [Vibrio sp. Ex25] gi|262336401|gb|ACY50196.1| putative amino acid ABC transporter permease protein [Vibrio sp. Ex25] Length = 246 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 42/102 (41%), Positives = 64/102 (62%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 F + IAL+ +AF+AE+ R G+ A+ RGQ EAA +LGL++ + LV+LPQA R I+ Sbjct: 114 HFWAGVIALTIAESAFMAEVFRGGIQAISRGQHEAAESLGLSYWQKMHLVILPQAFRQIL 173 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 PPL +Q++ +LK SSL +G +DL ++ +EI Sbjct: 174 PPLGNQFVYILKMSSLVSVIGLSDLTRRANELVVNEYLPLEI 215 >gi|323351208|ref|ZP_08086864.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis VMC66] gi|322122432|gb|EFX94143.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis VMC66] Length = 226 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 42/118 (35%), Positives = 71/118 (60%), Gaps = 8/118 (6%) Query: 243 QLHFDKPVLGQF-------NFIGGSTVSPE-FMSLYIALSCYTAAFIAEIVRSGLIAVPR 294 + + + P+L QF + T+ P + + + + Y A+IAE++RSG+ ++PR Sbjct: 63 EFYQNTPLLVQFVIVFYGLPLVSNYTIMPSIYWTAVLCVGLYHGAYIAEVIRSGIQSIPR 122 Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352 GQ EAA++ G T+ + R ++LPQA R I+PPL +Q +NL+KN+S + DL+ V Sbjct: 123 GQTEAALSQGFTYVETMRYIILPQAFRIILPPLINQVVNLIKNTSTVAIISGMDLMFV 180 >gi|315654090|ref|ZP_07907006.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus iners ATCC 55195] gi|315488786|gb|EFU78432.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus iners ATCC 55195] Length = 535 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 42/122 (34%), Positives = 76/122 (62%), Gaps = 4/122 (3%) Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 +S T A++AE++R G+I+ P+GQ EAA ALG++H + ++LPQA+R+ +P +T++++ Sbjct: 390 ISINTGAYLAEVIRGGIISTPKGQFEAASALGMSHSQKMWHIILPQAVRNCLPSITNEFI 449 Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA----LFMNRL 388 +K++S+ + ++L VG T+ +QT Q + I +YL L+ I L N+L Sbjct: 450 VNIKDTSVLSIISVSELFFVGTTVASQTFQFFQTYFIISIVYLILTFSITRIFRLIENKL 509 Query: 389 NA 390 Sbjct: 510 EG 511 Score = 36.2 bits (82), Expect = 8.1, Method: Compositional matrix adjust. Identities = 26/75 (34%), Positives = 34/75 (45%), Gaps = 10/75 (13%) Query: 85 YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN----------KLVAWICRVYVE 134 Y IL G + T +L+ G I IG LVG R KL+ W+ VYVE Sbjct: 295 YGKMILNGVIMTVFLSLIGTIIGFFIGLLVGIIRTIPTPISKVKYWLLKLINWLLAVYVE 354 Query: 135 VFRNIPPLVVIFFLY 149 +FR P +V +Y Sbjct: 355 IFRGTPMMVQAAVIY 369 >gi|150018983|ref|YP_001311237.1| polar amino acid ABC transporter, inner membrane subunit [Clostridium beijerinckii NCIMB 8052] gi|149905448|gb|ABR36281.1| polar amino acid ABC transporter, inner membrane subunit [Clostridium beijerinckii NCIMB 8052] Length = 242 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 35/89 (39%), Positives = 60/89 (67%) Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321 V P F+ + + Y A+I+E+VR+G+ ++P+GQ EAA + G +H + R ++LPQ ++ Sbjct: 89 VLPVFLIGILGVGVYHGAYISEVVRTGITSIPKGQFEAAKSQGFSHTQTMRYIILPQTVK 148 Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 IIPPL +Q +NL+KN+S+ + DL+ Sbjct: 149 IIIPPLANQLVNLIKNTSVLAMIAGGDLM 177 Score = 41.6 bits (96), Expect = 0.20, Method: Compositional matrix adjust. Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 6/77 (7%) Query: 90 LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 L GF+ T ++ G+I A ++G + G S K+ I R+YVEV +N P ++ +FFL+ Sbjct: 21 LEGFLTTLEVSILGLILALMLGIIFGVLSTSKIKIFKVINRIYVEVIQNTPLVIQVFFLF 80 Query: 150 KSVLSVLPIPDHSIVLP 166 +P +VLP Sbjct: 81 NG------LPYIKVVLP 91 >gi|269963237|ref|ZP_06177571.1| amino acid ABC transporter, permease protein [Vibrio harveyi 1DA3] gi|269832042|gb|EEZ86167.1| amino acid ABC transporter, permease protein [Vibrio harveyi 1DA3] Length = 306 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 44/144 (30%), Positives = 80/144 (55%) Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307 +P Q F G + + S + + ++A+IAE+VR+GL +V +GQ EAA +LGL+ Sbjct: 157 EPNAVQHFFFGPANLWENLASGVLCVGLLSSAYIAEVVRAGLQSVDKGQWEAADSLGLSR 216 Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367 R ++ PQ +++I P L Q ++L+K++S+ + ++ VG + N +G EI Sbjct: 217 WVKYRFIIAPQVLKAITPALAGQTISLVKDTSIVSLISIQEMTFVGTEMANSSGYIFEIW 276 Query: 368 LIWMFIYLSLSIMIALFMNRLNAK 391 LI F+Y + +++F + K Sbjct: 277 LIVGFVYFLICFGLSMFFRYIEKK 300 >gi|118473702|ref|YP_887060.1| glutamate permease [Mycobacterium smegmatis str. MC2 155] gi|118174989|gb|ABK75885.1| glutamate permease [Mycobacterium smegmatis str. MC2 155] Length = 226 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 47/137 (34%), Positives = 77/137 (56%) Query: 260 STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319 S F + L+ YTA+F+ E +RSG+ VP GQ EAA +LG T + R +LLPQA Sbjct: 90 SIADSNFRLAVLGLTVYTASFVCETIRSGVNTVPLGQAEAARSLGFTFGQNLRYILLPQA 149 Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379 R++I PL S + L+KN+++A A+G A+ + +I T + + I ++ L++ Sbjct: 150 FRAVIIPLGSVLIALIKNTTIASAIGVAEAALLMKAMIENTAALLTVGTIMALGFILLTL 209 Query: 380 MIALFMNRLNAKIALKE 396 + LF L ++A+ Sbjct: 210 PVGLFFGWLGKRLAVAR 226 Score = 36.6 bits (83), Expect = 7.4, Method: Compositional matrix adjust. Identities = 21/65 (32%), Positives = 31/65 (47%) Query: 83 SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142 Y I F T L + A I+GT++ A RL+ ++ W+ YV V RN P Sbjct: 5 DEYRDEIFAAFWTTIQLTVYSAVGALILGTVLAAMRLAPVPVMNWMGTAYVNVVRNTPLT 64 Query: 143 VVIFF 147 ++I F Sbjct: 65 LIILF 69 >gi|312874740|ref|ZP_07734759.1| ABC transporter, permease protein [Lactobacillus iners LEAF 2053A-b] gi|311089485|gb|EFQ47910.1| ABC transporter, permease protein [Lactobacillus iners LEAF 2053A-b] Length = 535 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 42/122 (34%), Positives = 76/122 (62%), Gaps = 4/122 (3%) Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 +S T A++AE++R G+I+ P+GQ EAA ALG++H + ++LPQA+R+ +P +T++++ Sbjct: 390 ISINTGAYLAEVIRGGIISTPKGQFEAASALGMSHSQKMWHIILPQAVRNCLPSITNEFI 449 Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA----LFMNRL 388 +K++S+ + ++L VG T+ +QT Q + I +YL L+ I L N+L Sbjct: 450 VNIKDTSVLSIISVSELFFVGTTVASQTFQFFQTYFIISIVYLILTFSITRIFRLIENKL 509 Query: 389 NA 390 Sbjct: 510 EG 511 Score = 36.6 bits (83), Expect = 7.9, Method: Compositional matrix adjust. Identities = 26/75 (34%), Positives = 34/75 (45%), Gaps = 10/75 (13%) Query: 85 YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN----------KLVAWICRVYVE 134 Y IL G + T +L+ G I IG LVG R KL+ W+ VYVE Sbjct: 295 YGKMILNGVIMTVFLSLIGTIIGFFIGLLVGIIRTIPTPLSKVKYWLLKLINWLLAVYVE 354 Query: 135 VFRNIPPLVVIFFLY 149 +FR P +V +Y Sbjct: 355 IFRGTPMMVQAAVIY 369 >gi|309807608|ref|ZP_07701556.1| ABC transporter, permease protein [Lactobacillus iners LactinV 01V1-a] gi|309809764|ref|ZP_07703618.1| ABC transporter, permease protein [Lactobacillus iners SPIN 2503V10-D] gi|308169144|gb|EFO71214.1| ABC transporter, permease protein [Lactobacillus iners LactinV 01V1-a] gi|308169943|gb|EFO71982.1| ABC transporter, permease protein [Lactobacillus iners SPIN 2503V10-D] Length = 535 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 42/122 (34%), Positives = 76/122 (62%), Gaps = 4/122 (3%) Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 +S T A++AE++R G+I+ P+GQ EAA ALG++H + ++LPQA+R+ +P +T++++ Sbjct: 390 ISINTGAYLAEVIRGGIISTPKGQFEAASALGMSHSQKMWHIILPQAVRNCLPSITNEFI 449 Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA----LFMNRL 388 +K++S+ + ++L VG T+ +QT Q + I +YL L+ I L N+L Sbjct: 450 VNIKDTSVLSIISVSELFFVGTTVASQTFQFFQTYFIISIVYLILTFSITRIFRLIENKL 509 Query: 389 NA 390 Sbjct: 510 EG 511 Score = 36.2 bits (82), Expect = 8.1, Method: Compositional matrix adjust. Identities = 26/75 (34%), Positives = 34/75 (45%), Gaps = 10/75 (13%) Query: 85 YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN----------KLVAWICRVYVE 134 Y IL G + T +L+ G I IG LVG R KL+ W+ VYVE Sbjct: 295 YGKMILNGVIMTVFLSLIGTIIGFFIGLLVGIIRTIPTPLSKVKYWLLKLINWLLAVYVE 354 Query: 135 VFRNIPPLVVIFFLY 149 +FR P +V +Y Sbjct: 355 IFRGTPMMVQAAVIY 369 >gi|228992897|ref|ZP_04152822.1| Arginine transport system permease protein artQ [Bacillus pseudomycoides DSM 12442] gi|228998942|ref|ZP_04158525.1| Arginine transport system permease protein artQ [Bacillus mycoides Rock3-17] gi|229006473|ref|ZP_04164126.1| Arginine transport system permease protein artQ [Bacillus mycoides Rock1-4] gi|228754786|gb|EEM04178.1| Arginine transport system permease protein artQ [Bacillus mycoides Rock1-4] gi|228760817|gb|EEM09780.1| Arginine transport system permease protein artQ [Bacillus mycoides Rock3-17] gi|228766946|gb|EEM15584.1| Arginine transport system permease protein artQ [Bacillus pseudomycoides DSM 12442] Length = 219 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 40/129 (31%), Positives = 80/129 (62%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P F++ +A S + A+++E++R+G+ AV +GQ EAA+ALG+ +RK + ++LPQA+++I Sbjct: 87 PAFLAAVLAFSLNSGAYMSEVIRAGIQAVDKGQTEAAMALGVPYRKMMKNIILPQALKNI 146 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 +P L +++ L K S++ +G DL+ + +T + +E +L +Y L I++ L Sbjct: 147 LPALVNEFATLTKESAVVTVIGATDLMRRAYIVGGETFKYLEPLLFVGLVYYILVIILTL 206 Query: 384 FMNRLNAKI 392 + ++ Sbjct: 207 VGKAIEGRM 215 >gi|170748674|ref|YP_001754934.1| polar amino acid ABC transporter, inner membrane subunit [Methylobacterium radiotolerans JCM 2831] gi|170655196|gb|ACB24251.1| polar amino acid ABC transporter, inner membrane subunit [Methylobacterium radiotolerans JCM 2831] Length = 240 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 43/133 (32%), Positives = 78/133 (58%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + + L +TA+ +AE VR+G+ ++PRGQ A A+G T + R VLLP A R I+P Sbjct: 108 FYTAVVCLGFFTASRVAEQVRAGIQSLPRGQRMAGTAMGFTTYQTYRYVLLPNAYRIILP 167 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 P+TS++LN LKN+S+A+ +G +L + ++ + Q E +Y+ +++++ Sbjct: 168 PMTSEFLNNLKNTSVALTIGLLELTARARSMQEFSFQVFEAFTAATILYVIINLVVVTAA 227 Query: 386 NRLNAKIALKEKK 398 L +A+ ++ Sbjct: 228 TFLEKAVAIPGQR 240 Score = 40.0 bits (92), Expect = 0.69, Method: Compositional matrix adjust. Identities = 31/105 (29%), Positives = 50/105 (47%), Gaps = 12/105 (11%) Query: 82 DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141 + +Y +L G + T A + A +G+L+G R +K I YVE+FRN+P Sbjct: 18 NGTYLDMLLSGLMWTITTALCSWVIAFFLGSLIGVLRTLPSKPANAIGTAYVELFRNVPL 77 Query: 142 LVVIFFLYKSVLSVLP---------IPD---HSIVLPFGMFLNNR 174 LV +F Y + V+P +PD ++ V+ G F +R Sbjct: 78 LVQMFLWYFVLPEVVPTRIGDAIKQLPDAPFYTAVVCLGFFTASR 122 >gi|108802342|ref|YP_642539.1| amino acid ABC transporter permease [Mycobacterium sp. MCS] gi|119871495|ref|YP_941447.1| polar amino acid ABC transporter, inner membrane subunit [Mycobacterium sp. KMS] gi|126438322|ref|YP_001074013.1| polar amino acid ABC transporter, inner membrane subunit [Mycobacterium sp. JLS] gi|108772761|gb|ABG11483.1| amino acid ABC transporter membrane protein, PAAT family / amino acid ABC transporter substrate-binding protein, PAAT family [Mycobacterium sp. MCS] gi|119697584|gb|ABL94657.1| amino acid ABC transporter substrate-binding protein, PAAT family / amino acid ABC transporter membrane protein, PAAT family [Mycobacterium sp. KMS] gi|126238122|gb|ABO01523.1| amino acid ABC transporter membrane protein, PAAT family / amino acid ABC transporter substrate-binding protein, PAAT family [Mycobacterium sp. JLS] Length = 591 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 67/206 (32%), Positives = 106/206 (51%), Gaps = 20/206 (9%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 V VLG+ L++ SR + T + GLP +V+I L Sbjct: 379 VIGLVLGMALAVAGISRSRLLRWPA-------RVYTDIFRGLPEVVIILLIG-------- 423 Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 LG +GG T + F AL AA+I EI RSG+ +V GQ+EA+ ALG ++ + Sbjct: 424 LGVGPIVGGLTGNNPFPLGIAALGLMAAAYIGEIFRSGIQSVESGQLEASRALGFSYSSS 483 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA----DLVSVGGTIINQTGQAIEI 366 RLV++PQ +R ++P L +Q+++LLK SSL +G +L VG + QTG + Sbjct: 484 MRLVVIPQGVRRVLPALMNQFISLLKASSLVYFLGLVADQRELFQVGRDLNAQTGSLSPL 543 Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKI 392 + +F YL L+I + +N ++A++ Sbjct: 544 VAAGLF-YLLLTIPLTHLVNYVDARL 568 Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust. Identities = 17/58 (29%), Positives = 31/58 (53%) Query: 91 VGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 G NT L S + ++G + +S ++L+ W RVY ++FR +P +V+I + Sbjct: 365 TGLPNTLILTVSAAVIGLVLGMALAVAGISRSRLLRWPARVYTDIFRGLPEVVIILLI 422 >gi|312872684|ref|ZP_07732749.1| ABC transporter, permease protein [Lactobacillus iners LEAF 2062A-h1] gi|311091726|gb|EFQ50105.1| ABC transporter, permease protein [Lactobacillus iners LEAF 2062A-h1] Length = 535 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 42/122 (34%), Positives = 76/122 (62%), Gaps = 4/122 (3%) Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 +S T A++AE++R G+I+ P+GQ EAA ALG++H + ++LPQA+R+ +P +T++++ Sbjct: 390 ISINTGAYLAEVIRGGIISTPKGQFEAASALGMSHSQKMWHIILPQAVRNCLPSITNEFI 449 Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA----LFMNRL 388 +K++S+ + ++L VG T+ +QT Q + I +YL L+ I L N+L Sbjct: 450 VNIKDTSVLSIISVSELFFVGTTVASQTFQFFQTYFIISIVYLILTFSITRIFRLIENKL 509 Query: 389 NA 390 Sbjct: 510 EG 511 Score = 36.6 bits (83), Expect = 8.1, Method: Compositional matrix adjust. Identities = 26/75 (34%), Positives = 34/75 (45%), Gaps = 10/75 (13%) Query: 85 YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN----------KLVAWICRVYVE 134 Y IL G + T +L+ G I IG LVG R KL+ W+ VYVE Sbjct: 295 YGKMILNGVIMTVFLSLIGTIIGFFIGLLVGIIRTIPTPLSKVKYWLLKLINWLLAVYVE 354 Query: 135 VFRNIPPLVVIFFLY 149 +FR P +V +Y Sbjct: 355 IFRGTPMMVQAAVIY 369 >gi|296117708|ref|ZP_06836292.1| glutamate permease [Corynebacterium ammoniagenes DSM 20306] gi|295969439|gb|EFG82680.1| glutamate permease [Corynebacterium ammoniagenes DSM 20306] Length = 312 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 54/163 (33%), Positives = 94/163 (57%), Gaps = 15/163 (9%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 + + + G+VL L RLS H + + + + + F +P L+L+ YQL Sbjct: 82 ILACIFGVVLGL--GRLSEH---RIVRWICGVIVEFFR--AIPVLLLMIFAYQL------ 128 Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 ++ + ++ F ++ +AL+ Y + IAEI+RSG+ ++P+GQ EAA A+GL+HR Sbjct: 129 FAVYDLVPSQQLA--FSAVVLALTLYNGSVIAEILRSGIRSLPKGQTEAAKAIGLSHRLT 186 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353 VLLPQA+ S++P L +Q + LK+S+L +G+ ++V G Sbjct: 187 MYRVLLPQAIASMLPALIAQMVIALKDSALGYQIGYVEIVRSG 229 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 43/141 (30%), Positives = 67/141 (47%), Gaps = 22/141 (15%) Query: 15 RMKFLYDM-----RVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAG 69 R LYD R +N +I A++ + W + NN + Sbjct: 4 RATVLYDAPGPKGRRNNRIYSVIAAVIFLAVIAWVAWTLNNNGQ---------------- 47 Query: 70 FEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWIC 129 FE + P+ ++ T +L G T + AF+ +I A I G ++G GRLS +++V WIC Sbjct: 48 FE-SRLWTPFLQSQTWTTYLLPGLRGTLFSAFASIILACIFGVVLGLGRLSEHRIVRWIC 106 Query: 130 RVYVEVFRNIPPLVVIFFLYK 150 V VE FR IP L+++ F Y+ Sbjct: 107 GVIVEFFRAIPVLLLMIFAYQ 127 >gi|241895818|ref|ZP_04783114.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Weissella paramesenteroides ATCC 33313] gi|241870861|gb|EER74612.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Weissella paramesenteroides ATCC 33313] Length = 218 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 56/190 (29%), Positives = 96/190 (50%), Gaps = 30/190 (15%) Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPT 234 +T++ + SF++G +L + + + G + LPLL I F F LP Sbjct: 22 VTIEVAVVSIILSFIIGSILGVIRYVKIPYLSQIVGFIIDLIRNLPLLLIIFFTYFALP- 80 Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294 K +HF G S F AL+ + + +AEI+RSG++AVP+ Sbjct: 81 ------KIGIHF------------GVITSTIF-----ALTIFESTMLAEIIRSGIMAVPK 117 Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354 GQ+E A++ GL ++A ++LPQA + +IPP+ SQ+++L+K++SLA + ++ Sbjct: 118 GQLEGALSNGLNFKQALWHIILPQAYKKMIPPIVSQFVSLIKDTSLATIIMLPEVTYRAQ 177 Query: 355 TIINQTGQAI 364 + Q AI Sbjct: 178 IVYAQEPSAI 187 >gi|227823543|ref|YP_002827516.1| putative amino acid ABC transporter, permease protein [Sinorhizobium fredii NGR234] gi|227342545|gb|ACP26763.1| putative amino acid ABC transporter, permease protein [Sinorhizobium fredii NGR234] Length = 221 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 76/239 (31%), Positives = 114/239 (47%), Gaps = 25/239 (10%) Query: 160 DHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKAL 219 D SI+L F L L + T K+ + VLG L F L+R +A+ Sbjct: 4 DFSIILRFQEAL--------ALGLWTTIKLTLICVVLGCSLGFF-IGLARTSRSTVLRAI 54 Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279 +Y+ F G P LV + + + F P++ +S IAL+ Y A Sbjct: 55 SSVYVEFFR--GTPVLVQL---FWIFFCLPLILDVEL-------SNLISGVIALTLYMGA 102 Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339 +E R+ L ++ Q++A +ALGL R V+LPQA+ IP L S ++L K S+ Sbjct: 103 ISSETFRASLKSIGPEQLDACVALGLPRRVQVTSVILPQAVLRAIPTLLSNCVSLFKESA 162 Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEII----LIWMFIYLSLSIMIALFMNRLNAKIAL 394 L AVG ADL+ VG I N T + IE++ LI+ I L+ + L R+ AK+A+ Sbjct: 163 LVSAVGMADLMFVGQNISNNTARPIEVLTVVALIYFLIAFPLTRAVTLVERRVLAKLAI 221 >gi|119961621|ref|YP_948805.1| amino acid ABC transporter permease [Arthrobacter aurescens TC1] gi|119948480|gb|ABM07391.1| putative amino acid ABC transporter, permease protein [Arthrobacter aurescens TC1] Length = 263 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 45/131 (34%), Positives = 79/131 (60%), Gaps = 4/131 (3%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 ++L AA+IAE +R+GL AVP+GQMEAA +LG+ H +A +++PQA + ++PPLT++ Sbjct: 133 VSLGMVAAAYIAETLRAGLQAVPKGQMEAARSLGMPHWRAMVSIVIPQAFKIVLPPLTNE 192 Query: 331 YLNLLKNSSLAVAVGFA----DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386 + L K+SSL +G +L G I+ G + +L+ YL ++I ++L Sbjct: 193 IILLTKDSSLIYVLGLTASQYELTKFGRDGISSLGAGLTPLLVAGAFYLVITIPLSLLAR 252 Query: 387 RLNAKIALKEK 397 + ++ A ++ Sbjct: 253 KFESRSARTKR 263 >gi|327463113|gb|EGF09434.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK1] Length = 226 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 42/118 (35%), Positives = 71/118 (60%), Gaps = 8/118 (6%) Query: 243 QLHFDKPVLGQF-------NFIGGSTVSPE-FMSLYIALSCYTAAFIAEIVRSGLIAVPR 294 + + + P+L QF + T+ P + + + + Y A+IAE++RSG+ ++PR Sbjct: 63 EFYQNTPLLVQFVIVFYGLPLVSNYTIMPSIYWTAVLCVGLYHGAYIAEVIRSGIQSIPR 122 Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352 GQ EAA++ G T+ + R ++LPQA R I+PPL +Q +NL+KN+S + DL+ V Sbjct: 123 GQTEAALSQGFTYVETMRYIILPQAFRIILPPLINQVVNLIKNTSTVAIISGMDLMFV 180 >gi|315925477|ref|ZP_07921688.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Pseudoramibacter alactolyticus ATCC 23263] gi|315621378|gb|EFV01348.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Pseudoramibacter alactolyticus ATCC 23263] Length = 221 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 45/122 (36%), Positives = 75/122 (61%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I L+ A++AEI R G+ +V +GQMEAA +LGL H A R V+LPQA+R++IP + +Q Sbjct: 97 ITLTLNAGAYLAEIFRGGIQSVDKGQMEAARSLGLPHGMAMRKVILPQAIRTMIPAIVNQ 156 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 + LK+SS+ +G A+L VG II ++ + LI +Y + ++++ R+ Sbjct: 157 CIITLKDSSILSVIGMAELTQVGKLIIANNLESFRMWLIVGIMYFIIIMILSWVSKRIEK 216 Query: 391 KI 392 ++ Sbjct: 217 RL 218 Score = 39.7 bits (91), Expect = 0.91, Method: Compositional matrix adjust. Identities = 24/68 (35%), Positives = 35/68 (51%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G T ++ A ++G L G +S NK+ I RVYV++ R P +V FF+ Sbjct: 18 LLQGLAVTLESTLLSLVLAAVVGLLFGLLSVSRNKVSRAIARVYVDIIRGTPIIVQAFFI 77 Query: 149 YKSVLSVL 156 Y V S L Sbjct: 78 YFGVTSAL 85 >gi|197335791|ref|YP_002156347.1| general L-amino acid transport system permease protein AapM [Vibrio fischeri MJ11] gi|197317281|gb|ACH66728.1| general L-amino acid transport system permease protein AapM [Vibrio fischeri MJ11] Length = 365 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 36/83 (43%), Positives = 60/83 (72%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I + ++AA++AE+VR GL A+P+GQ EAA ALGL + K RL++LPQA++ IP + + Sbjct: 235 IGVVLFSAAYMAEVVRGGLQAIPKGQYEAADALGLGYWKKMRLIILPQALKITIPSIVNT 294 Query: 331 YLNLLKNSSLAVAVGFADLVSVG 353 ++ L K++SL + +G D++ +G Sbjct: 295 FIGLFKDTSLVLIIGMFDVLGIG 317 >gi|170741792|ref|YP_001770447.1| polar amino acid ABC transporter inner membrane subunit [Methylobacterium sp. 4-46] gi|168196066|gb|ACA18013.1| polar amino acid ABC transporter, inner membrane subunit [Methylobacterium sp. 4-46] Length = 220 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 48/136 (35%), Positives = 79/136 (58%), Gaps = 5/136 (3%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G +SP SL +ALSCY +F AEI+R+G++++ GQ EA ALG+T + R ++LPQ Sbjct: 84 GLEMSPVTASL-LALSCYGGSFYAEIIRAGIVSIDAGQGEAGAALGMTPGQTMRRIILPQ 142 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE----IILIWMFIY 374 A R ++PPL +Q + LKN+SL + DLV + + + +E + + + I Sbjct: 143 AFRRMVPPLMNQSIIQLKNTSLVSVLAVPDLVYQAQVAAHDSYRPLETYTAVAVAYFVIL 202 Query: 375 LSLSIMIALFMNRLNA 390 L++++ + RL A Sbjct: 203 FPLTVLVRIGERRLGA 218 >gi|10954336|gb|AAG24254.1| YckJ [Bacillus subtilis] Length = 234 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 66/209 (31%), Positives = 113/209 (54%), Gaps = 21/209 (10%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 + SF+ G++L+L T L+R + + + +Y+S + G P LV + + + L Sbjct: 40 ILSFIFGMILALI-TALARMSKVRPLRWVFSVYVSA--VRGTPLLVQLFIIFYL------ 90 Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 FN T+ P F S IA S A+ +EI+R+ +++VP+GQ EA +G+TH+K Sbjct: 91 FPAFNI----TLDP-FPSAVIAFSLNVGAYASEIIRASILSVPKGQWEAGYTIGMTHQKT 145 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI- 369 V+LPQA R IPPL++ +++L+K++SLA + A+L I + I +I I Sbjct: 146 LFRVILPQAFRVSIPPLSNTFISLIKDTSLASQILVAELFRKAQEIGARNLDQILVIYIE 205 Query: 370 -----WMFIYLSLSIMIALFMNRLNAKIA 393 W+ +L LS++ + RL+ +A Sbjct: 206 AAFIYWIICFL-LSLVQHVIERRLDRYVA 233 >gi|331701132|ref|YP_004398091.1| polar amino acid ABC transporter inner membrane subunit [Lactobacillus buchneri NRRL B-30929] gi|329128475|gb|AEB73028.1| polar amino acid ABC transporter, inner membrane subunit [Lactobacillus buchneri NRRL B-30929] Length = 489 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 59/202 (29%), Positives = 103/202 (50%), Gaps = 21/202 (10%) Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251 F ++G++L+L R +K + L + Y T I G P +V + Y Sbjct: 304 FGVLIGVILALM-----RFSKQKWLRGLAISY--TEFIRGTPLMVQVLFVY--------- 347 Query: 252 GQFNFIGGSTVS-PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 F G V+ P +S IA+S + A++AEI+R G+ +V +GQ EAA +LGL+ Sbjct: 348 ----FGIGVVVNIPALISGMIAVSLNSGAYVAEIIRGGINSVAKGQTEAAASLGLSKGDL 403 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370 R V+LPQA ++I P L +++++L+K SS+ +G DL+ + T + + I + Sbjct: 404 MRFVILPQAFKNIWPALGNEFISLIKESSIVSIIGVTDLIYQLNIVRADTYRGVMPIFVA 463 Query: 371 MFIYLSLSIMIALFMNRLNAKI 392 M +Y ++ + +N K+ Sbjct: 464 MLLYFIMTFALTRVLNHFEGKM 485 >gi|312881585|ref|ZP_07741363.1| hypothetical protein VIBC2010_10047 [Vibrio caribbenthicus ATCC BAA-2122] gi|309370648|gb|EFP98122.1| hypothetical protein VIBC2010_10047 [Vibrio caribbenthicus ATCC BAA-2122] Length = 365 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 36/98 (36%), Positives = 66/98 (67%) Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315 F+ + + + + I + ++AA++AE++R GL A+P+GQ EAA ALGLT+ K L++ Sbjct: 220 FLAEGSETDKLIRALIGVVMFSAAYMAEVIRGGLQAIPKGQYEAADALGLTYWKKMGLII 279 Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353 LPQA++ IP + + ++ L K++SL + +G D++ +G Sbjct: 280 LPQALKITIPSIVNTFIGLFKDTSLVLIIGMFDVLGIG 317 >gi|259500817|ref|ZP_05743719.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus iners DSM 13335] gi|302190732|ref|ZP_07266986.1| ABC transporter permease component [Lactobacillus iners AB-1] gi|309805950|ref|ZP_07699978.1| ABC transporter, permease protein [Lactobacillus iners LactinV 03V1-b] gi|312871166|ref|ZP_07731264.1| ABC transporter, permease protein [Lactobacillus iners LEAF 3008A-a] gi|312873326|ref|ZP_07733381.1| ABC transporter, permease protein [Lactobacillus iners LEAF 2052A-d] gi|325912202|ref|ZP_08174599.1| ABC transporter, permease protein [Lactobacillus iners UPII 143-D] gi|325913645|ref|ZP_08176007.1| ABC transporter, permease protein [Lactobacillus iners UPII 60-B] gi|329919777|ref|ZP_08276728.1| ABC transporter, permease protein [Lactobacillus iners SPIN 1401G] gi|259167511|gb|EEW52006.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus iners DSM 13335] gi|308167663|gb|EFO69814.1| ABC transporter, permease protein [Lactobacillus iners LactinV 03V1-b] gi|311091206|gb|EFQ49595.1| ABC transporter, permease protein [Lactobacillus iners LEAF 2052A-d] gi|311093180|gb|EFQ51526.1| ABC transporter, permease protein [Lactobacillus iners LEAF 3008A-a] gi|325475861|gb|EGC79030.1| ABC transporter, permease protein [Lactobacillus iners UPII 143-D] gi|325477004|gb|EGC80154.1| ABC transporter, permease protein [Lactobacillus iners UPII 60-B] gi|328937124|gb|EGG33552.1| ABC transporter, permease protein [Lactobacillus iners SPIN 1401G] Length = 535 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 42/122 (34%), Positives = 76/122 (62%), Gaps = 4/122 (3%) Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 +S T A++AE++R G+I+ P+GQ EAA ALG++H + ++LPQA+R+ +P +T++++ Sbjct: 390 ISINTGAYLAEVIRGGIISTPKGQFEAASALGMSHSQKMWHIILPQAVRNCLPSITNEFI 449 Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA----LFMNRL 388 +K++S+ + ++L VG T+ +QT Q + I +YL L+ I L N+L Sbjct: 450 VNIKDTSVLSIISVSELFFVGTTVASQTFQFFQTYFIISIVYLILTFSITRIFRLIENKL 509 Query: 389 NA 390 Sbjct: 510 EG 511 Score = 36.2 bits (82), Expect = 8.2, Method: Compositional matrix adjust. Identities = 26/75 (34%), Positives = 34/75 (45%), Gaps = 10/75 (13%) Query: 85 YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN----------KLVAWICRVYVE 134 Y IL G + T +L+ G I IG LVG R KL+ W+ VYVE Sbjct: 295 YGKMILNGVIMTVFLSLIGTIIGFFIGLLVGIIRTIPTPLSKVKYWLLKLINWLLAVYVE 354 Query: 135 VFRNIPPLVVIFFLY 149 +FR P +V +Y Sbjct: 355 IFRGTPMMVQAAVIY 369 >gi|125718375|ref|YP_001035508.1| ABC transporter membrane-spanning permease, arginine/histidine transport, putative [Streptococcus sanguinis SK36] gi|125498292|gb|ABN44958.1| ABC transporter membrane-spanning permease, arginine/histidine transport, putative [Streptococcus sanguinis SK36] gi|325690799|gb|EGD32800.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK115] gi|325694843|gb|EGD36748.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK150] gi|325696132|gb|EGD38023.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK160] Length = 226 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 42/118 (35%), Positives = 71/118 (60%), Gaps = 8/118 (6%) Query: 243 QLHFDKPVLGQF-------NFIGGSTVSPE-FMSLYIALSCYTAAFIAEIVRSGLIAVPR 294 + + + P+L QF + T+ P + + + + Y A+IAE++RSG+ ++PR Sbjct: 63 EFYQNTPLLVQFVIVFYGLPLVSNYTIMPSIYWTAVLCVGLYHGAYIAEVIRSGIQSIPR 122 Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352 GQ EAA++ G T+ + R ++LPQA R I+PPL +Q +NL+KN+S + DL+ V Sbjct: 123 GQTEAALSQGFTYVETMRYIILPQAFRIILPPLINQVVNLIKNTSTVAIISGMDLMFV 180 >gi|300173760|ref|YP_003772926.1| glutamine-binding protein/glutamine transport system permease [Leuconostoc gasicomitatum LMG 18811] gi|299888139|emb|CBL92107.1| Glutamine-binding protein / Glutamine transport system permease protein [Leuconostoc gasicomitatum LMG 18811] Length = 482 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 47/159 (29%), Positives = 82/159 (51%), Gaps = 23/159 (14%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 + LPL+ ++ F+ GLP+++ + + P F + + L Sbjct: 328 RGLPLMVLAFFIYIGLPSVIGMKI-----------------------PAFTAGLLTLVLN 364 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 A+ A VR G AV RGQMEA+ +LGL++ K+ R V++PQ ++ +IP +Q++ LK Sbjct: 365 EGAYTAAFVRGGFAAVDRGQMEASRSLGLSYAKSMRKVVVPQGLKIMIPSFINQFIITLK 424 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375 ++S+ A+G +L G I+++ Q + I IYL Sbjct: 425 DTSILSAIGILELTQTGSLIVSRNSQGFRVWAIVAVIYL 463 >gi|256849332|ref|ZP_05554765.1| glutamine ABC transporter permease [Lactobacillus crispatus MV-1A-US] gi|256714108|gb|EEU29096.1| glutamine ABC transporter permease [Lactobacillus crispatus MV-1A-US] Length = 494 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 63/202 (31%), Positives = 107/202 (52%), Gaps = 22/202 (10%) Query: 189 IFVFSFVLGIVLSLFAT--RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246 I +FS ++GI+L + RLS++ K + + YI I G P +V I Y Sbjct: 301 ITIFSVLIGIILGMLLALMRLSKN---KLLHWIAVCYIE--FIRGTPQMVQILFVY---- 351 Query: 247 DKPVLGQFNFIGGSTVS--PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304 F G+ +S ++ IA+ + A++AE +RSG+ +V +GQ EAA +LG Sbjct: 352 ---------FGVGALISNLSAVVAGIIAIGLNSGAYVAEDIRSGIASVAKGQTEAARSLG 402 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364 L+ KA R V++PQA+++I P L ++++ LLK+SSL +G +L+ I T + + Sbjct: 403 LSQAKAYRYVIIPQALKNIWPALGNEFITLLKDSSLVSVIGVTELMYQTELIQTSTYRGV 462 Query: 365 EIILIWMFIYLSLSIMIALFMN 386 + I M IY ++ + +N Sbjct: 463 LPLFIAMIIYFIMTFTLTRLLN 484 Score = 42.0 bits (97), Expect = 0.16, Method: Compositional matrix adjust. Identities = 19/41 (46%), Positives = 25/41 (60%) Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 I+G L+ RLS NKL+ WI Y+E R P +V I F+Y Sbjct: 311 ILGMLLALMRLSKNKLLHWIAVCYIEFIRGTPQMVQILFVY 351 >gi|281422145|ref|ZP_06253144.1| putative amino acid ABC transporter, amino acid-binding/permease protein [Prevotella copri DSM 18205] gi|281403796|gb|EFB34476.1| putative amino acid ABC transporter, amino acid-binding/permease protein [Prevotella copri DSM 18205] Length = 522 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 53/170 (31%), Positives = 92/170 (54%), Gaps = 21/170 (12%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGK-ALPLLYISTFLIF--GLPTLVLIALKYQLHFD 247 + S +LG ++++ R HE G +P + +L G PT+V + + Y + F Sbjct: 329 ILSVILGTLIAIVRAR-----HECKGDWKIPNMLCQLYLTIMRGTPTMVQLLIIYYVVF- 382 Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307 S + + IA +AA+IAE++RSG+++V GQMEA +LGL++ Sbjct: 383 -----------ASADVNKILVAVIAFGLNSAAYIAEVIRSGIMSVDNGQMEAGRSLGLSY 431 Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII 357 K RL++LPQA ++++P + ++ + LLK +S++ +G DL G II Sbjct: 432 GKTMRLIILPQAFKNVLPAMGNELITLLKETSISGYIGLVDLTK-GSDII 480 >gi|126434727|ref|YP_001070418.1| polar amino acid ABC transporter, inner membrane subunit [Mycobacterium sp. JLS] gi|126234527|gb|ABN97927.1| amino acid ABC transporter membrane protein 1, PAAT family [Mycobacterium sp. JLS] Length = 226 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 47/126 (37%), Positives = 76/126 (60%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + L+ YTA+F+ E VRSG+ VP GQ EAA +LGLT + R++LLPQA RS+I PL S Sbjct: 101 LGLTVYTASFVCETVRSGVNTVPLGQAEAARSLGLTFSQNLRMILLPQAFRSVIIPLGSV 160 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 + L KN+++A A+G A+ + +I T + + I+ ++ L++ + L L Sbjct: 161 LIALTKNTTIASAIGVAEAALLMKEMIENTAALLVVGSIFALGFIILTLPLGLVFGWLGK 220 Query: 391 KIALKE 396 ++A+ Sbjct: 221 RLAVAR 226 Score = 37.7 bits (86), Expect = 3.4, Method: Compositional matrix adjust. Identities = 21/65 (32%), Positives = 32/65 (49%) Query: 83 SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142 + Y I F T L + A I+GT++ RLS +++W+ YV V RN P Sbjct: 5 TEYRAQIFEAFWTTIQLTVYSAVGALILGTVLAGIRLSPVPMLSWLGTAYVNVIRNTPLT 64 Query: 143 VVIFF 147 ++I F Sbjct: 65 LIILF 69 >gi|298290195|ref|YP_003692134.1| polar amino acid ABC transporter inner membrane subunit [Starkeya novella DSM 506] gi|296926706|gb|ADH87515.1| polar amino acid ABC transporter, inner membrane subunit [Starkeya novella DSM 506] Length = 222 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 54/156 (34%), Positives = 89/156 (57%), Gaps = 11/156 (7%) Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286 + I G PTL+ I + ++F P LG +SP F++ +AL A++AEIVR Sbjct: 64 WFIRGTPTLIQI---FIIYFGLPQLGL-------RLSP-FVAGVVALGFNGGAYVAEIVR 112 Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346 +GL A+P+GQ E+A ALG+ + ++LPQ R I+PP+T++ + ++KN+SL + Sbjct: 113 AGLSAIPKGQTESAQALGMGRWQMMTRIILPQVFRVILPPVTNEAITMVKNTSLLSTITV 172 Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382 +L TII T + E + IYL ++ +I+ Sbjct: 173 VELTLYSQTIIATTFRPFEFYIATALIYLVMTSLIS 208 >gi|328554131|gb|AEB24623.1| YqiY [Bacillus amyloliquefaciens TA208] gi|328912522|gb|AEB64118.1| high affinity arginine ABC transporter (permease) [Bacillus amyloliquefaciens LL3] Length = 219 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 61/216 (28%), Positives = 107/216 (49%), Gaps = 37/216 (17%) Query: 191 VFSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244 V VLGIVLSLF + F+ + PL+ + FG+P L L +Q+ Sbjct: 31 VIGLVLGIVLSLFKISTISPLKWIADFYTSIFRGTPLVLQLMIIYFGMPQL----LGFQI 86 Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304 +F + ALS +AA+++EI+R+G+ A+ +GQ EAA+ALG Sbjct: 87 D-------------------QFWAAVTALSLNSAAYVSEIIRAGINAIDKGQKEAAVALG 127 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA- 363 + + K + +LLPQA ++I P + ++ + L K S++ +G D++ Q+G A Sbjct: 128 VPYGKMMKDLLLPQAFKNISPAIINELITLTKESAIVTVIGLGDIMRRA----YQSGAAT 183 Query: 364 ---IEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 +E +++ FIY L +++A + K+ + Sbjct: 184 YNYLEPLIVAGFIYYVLVLILAFIGKGVERKLKAND 219 >gi|292487757|ref|YP_003530630.1| glutamine ABC transporter inner membrane protein [Erwinia amylovora CFBP1430] gi|292898986|ref|YP_003538355.1| glutamine ABC transporter permease [Erwinia amylovora ATCC 49946] gi|291198834|emb|CBJ45944.1| glutamine ABC transporter, permease protein [Erwinia amylovora ATCC 49946] gi|291553177|emb|CBA20222.1| glutamine ABC transport system, inner membrane component [Erwinia amylovora CFBP1430] gi|312171871|emb|CBX80128.1| glutamine ABC transport system, inner membrane component [Erwinia amylovora ATCC BAA-2158] Length = 219 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 61/206 (29%), Positives = 113/206 (54%), Gaps = 12/206 (5%) Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248 I V V G+++ L A +R + + + L++I LI G P +V + Y F Sbjct: 25 ISVLGLVGGVLIGLVAG-FARAYGGWLSRNIALVFIE--LIRGTPIVVQVMFIY---FAL 78 Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308 P+ F + + P F + + + + A+IAEI R ++++ RG EA +ALGL+ R Sbjct: 79 PM--AFTDL---RIDP-FSAAVVTIMINSGAYIAEITRGAVLSINRGFREAGLALGLSSR 132 Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368 + R V++P A+R ++PPL +Q++ +K++SL + +G A+L G II +A+EI Sbjct: 133 ETLRYVIMPLALRRMLPPLGNQWIVSIKDTSLFIVIGVAELTRQGQEIIAGNFRALEIWS 192 Query: 369 IWMFIYLSLSIMIALFMNRLNAKIAL 394 IYL ++++++ + RL ++ + Sbjct: 193 AVAVIYLIITLVLSFVLRRLERRMKI 218 >gi|319777993|ref|YP_004134423.1| polar amino acid abc transporter, inner membrane subunit [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317171712|gb|ADV15249.1| polar amino acid ABC transporter, inner membrane subunit [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 324 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 54/168 (32%), Positives = 94/168 (55%), Gaps = 11/168 (6%) Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290 GLP L+ + Y ++ P LG F+ G+ + +ALS A++ EI RSG+ Sbjct: 168 GLPLLMQV---YLIYLGLPQLG---FVVGAVPAG-----ILALSLCYGAYMTEIFRSGIQ 216 Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 ++ RGQ EA+ ++G R ++LPQA+ IIPP +Q++++LK+SSL +G +L+ Sbjct: 217 SIDRGQWEASRSMGFGFSLTMRRIILPQALPVIIPPTGNQFISMLKDSSLVSVIGVWELM 276 Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 + T+ +T Q +E+++ IY LSI + L +R+ A + + Sbjct: 277 FLARTLGQKTFQHMEMLISASLIYWMLSICLELIQSRIERHYARSKVR 324 >gi|313622696|gb|EFR93054.1| arginine transport system permease protein ArtQ [Listeria innocua FSL J1-023] Length = 165 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 42/113 (37%), Positives = 76/113 (67%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+S IALS +AA++AEI+R+G+ AV +GQMEAA +LG+T + R ++LPQA+++I+P Sbjct: 35 FVSGCIALSLNSAAYVAEIIRAGISAVNKGQMEAARSLGMTQGASMRYIILPQAVKNILP 94 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378 L ++++ ++K SS+ +G +L+ + G + + + ++I IY L+ Sbjct: 95 ALGNEFVTVIKESSIVSVIGVTELMFMTGVVQGASFKPFIPLIITSLIYFVLT 147 >gi|302866036|ref|YP_003834673.1| polar amino acid ABC transporter inner membrane subunit [Micromonospora aurantiaca ATCC 27029] gi|315502595|ref|YP_004081482.1| polar amino acid abc transporter, inner membrane subunit [Micromonospora sp. L5] gi|302568895|gb|ADL45097.1| polar amino acid ABC transporter, inner membrane subunit [Micromonospora aurantiaca ATCC 27029] gi|315409214|gb|ADU07331.1| polar amino acid ABC transporter, inner membrane subunit [Micromonospora sp. L5] Length = 218 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 56/157 (35%), Positives = 86/157 (54%), Gaps = 31/157 (19%) Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279 PL + FL+F +P K ++ D F S IAL YT+A Sbjct: 66 PLTLVFAFLVFAVP-------KLDVNIDY-----------------FNSACIALIAYTSA 101 Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339 FI E+VRSG+ V GQ EAA ALG+T + L++LPQA+R+++PP+ S + +LKN++ Sbjct: 102 FICEVVRSGVNTVATGQAEAARALGMTFAQVLTLIVLPQALRAMVPPMMSVLIAMLKNTT 161 Query: 340 LAVAVGFADLVSVGGTI---INQTGQAIEIILIWMFI 373 +A GF+ L + G I +++ G+ I+L W+ I Sbjct: 162 --IAAGFSVLEA--GAIPAYMSERGEPQFIVLTWIVI 194 >gi|255659183|ref|ZP_05404592.1| L-cystine ABC transporter, permease protein [Mitsuokella multacida DSM 20544] gi|260848634|gb|EEX68641.1| L-cystine ABC transporter, permease protein [Mitsuokella multacida DSM 20544] Length = 214 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 41/134 (30%), Positives = 80/134 (59%), Gaps = 1/134 (0%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P+ + +A + AA+ AEI R+G+ +VP+GQ EAA LG+ + + R ++LPQ +R + Sbjct: 82 PDIAAALLAFTLNYAAYFAEIFRAGIQSVPKGQYEAARTLGMNYTQTMRRIILPQVIRIV 141 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 +PP++++ +NL+K++SL + DL+ V TI+ + ++ +F YL+++ ++ Sbjct: 142 LPPVSNETINLVKDTSLIYILAMNDLLRVARTIVQREFDMTPFLIAGVF-YLAMTFVLTW 200 Query: 384 FMNRLNAKIALKEK 397 +L A +K Sbjct: 201 MFKKLEAYYGKYDK 214 >gi|329927997|ref|ZP_08282001.1| ABC transporter, permease protein [Paenibacillus sp. HGF5] gi|328938101|gb|EGG34498.1| ABC transporter, permease protein [Paenibacillus sp. HGF5] Length = 482 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 52/176 (29%), Positives = 94/176 (53%), Gaps = 23/176 (13%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 + +PLL ++ F+ FG+P F F T+SP ++ + LS Sbjct: 327 RGIPLLVLAFFIYFGIPQ------------------AFGF----TMSP-IVAAVLTLSLN 363 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 A++ EI+R G+ ++ GQ+EAA +LGL +RKA +++PQA++ +IP +Q + LK Sbjct: 364 AGAYVTEIIRGGIQSIDPGQLEAARSLGLPYRKAMMKIIIPQAIKVMIPTFINQLVITLK 423 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 ++S+ +G +L G II +T + +I L+ +YL + ++ +RL K+ Sbjct: 424 DTSILSVIGLVELTQSGKIIIARTFASFDIWLVVAIMYLVVITILTKISDRLERKV 479 Score = 38.1 bits (87), Expect = 2.6, Method: Compositional matrix adjust. Identities = 21/62 (33%), Positives = 35/62 (56%) Query: 88 AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147 ++L G NT L + A +G + G ++ N+ + I V+V++FR IP LV+ FF Sbjct: 278 SLLKGLGNTLLLTIVSLFFAFFLGLIFGFMKVGRNRWLRGIATVFVDIFRGIPLLVLAFF 337 Query: 148 LY 149 +Y Sbjct: 338 IY 339 >gi|327474724|gb|EGF20129.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK408] gi|327490281|gb|EGF22069.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK1058] gi|328946748|gb|EGG40886.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK1087] Length = 226 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 42/118 (35%), Positives = 71/118 (60%), Gaps = 8/118 (6%) Query: 243 QLHFDKPVLGQF-------NFIGGSTVSPE-FMSLYIALSCYTAAFIAEIVRSGLIAVPR 294 + + + P+L QF + T+ P + + + + Y A+IAE++RSG+ ++PR Sbjct: 63 EFYQNTPLLVQFVIVFYGLPLVSNYTIMPSIYWTAVLCVGLYHGAYIAEVIRSGIQSIPR 122 Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352 GQ EAA++ G T+ + R ++LPQA R I+PPL +Q +NL+KN+S + DL+ V Sbjct: 123 GQTEAALSQGFTYVETMRYIILPQAFRIILPPLINQIVNLIKNTSTVAIISGMDLMFV 180 >gi|324991489|gb|EGC23422.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK353] gi|324993849|gb|EGC25768.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK405] gi|324994830|gb|EGC26743.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK678] gi|325687271|gb|EGD29293.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK72] Length = 226 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 42/118 (35%), Positives = 71/118 (60%), Gaps = 8/118 (6%) Query: 243 QLHFDKPVLGQF-------NFIGGSTVSPE-FMSLYIALSCYTAAFIAEIVRSGLIAVPR 294 + + + P+L QF + T+ P + + + + Y A+IAE++RSG+ ++PR Sbjct: 63 EFYQNTPLLVQFVIVFYGLPLVSNYTIMPSIYWTAVLCVGLYHGAYIAEVIRSGIQSIPR 122 Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352 GQ EAA++ G T+ + R ++LPQA R I+PPL +Q +NL+KN+S + DL+ V Sbjct: 123 GQTEAALSQGFTYVETMRYIILPQAFRIILPPLINQVVNLIKNTSTVAIISGMDLMFV 180 >gi|150389461|ref|YP_001319510.1| polar amino acid ABC transporter, inner membrane subunit [Alkaliphilus metalliredigens QYMF] gi|149949323|gb|ABR47851.1| polar amino acid ABC transporter, inner membrane subunit [Alkaliphilus metalliredigens QYMF] Length = 217 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 40/132 (30%), Positives = 83/132 (62%), Gaps = 4/132 (3%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P+ + +AL+ +AA+IAEI+R+G+++V +GQMEAA +LG+ H A + +++PQA ++I Sbjct: 85 PDLFAGIVALTFNSAAYIAEIIRAGIMSVDKGQMEAARSLGMPHSMAMKHIIIPQAFKNI 144 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI----WMFIYLSLSI 379 +P L ++++ ++K S++ +G +D++ + T + E +++ + I +LS Sbjct: 145 LPALGNEFIVVIKESAIVSIIGISDIMRTATIVRGNTYRPFEPLIVAAVMYFMITFTLSN 204 Query: 380 MIALFMNRLNAK 391 ++ + RL A Sbjct: 205 LMRMMERRLRAS 216 >gi|119960912|ref|YP_949421.1| amino acid ABC transporter permease [Arthrobacter aurescens TC1] gi|119947771|gb|ABM06682.1| putative amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Arthrobacter aurescens TC1] Length = 321 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 69/229 (30%), Positives = 124/229 (54%), Gaps = 26/229 (11%) Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL----YISTFLIFGLPTLVL 237 T+ A V FVLG +L+L RLS A PLL + +++ P LV Sbjct: 77 TLKLTAISGVLGFVLGFILALM--RLS---------ASPLLVSVSWTFSWIFRSTPLLVQ 125 Query: 238 IALKYQLHF--DKPVLG------QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289 + L Y L + +K LG +F +T+ +F + + L+ AA+ AEI+R G+ Sbjct: 126 LLLWYNLGYLYEKISLGIPFTDVRFFEAQTTTLISQFAAAVLGLTLNQAAYSAEIIRGGI 185 Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349 ++V +GQ+EAA ALG+ K + ++LPQAMR+I+P ++ + L+K +S+ + +++L Sbjct: 186 LSVDQGQLEAASALGIPAWKRSTRIVLPQAMRAILPNAFNEIIGLVKGTSIVYVLAYSEL 245 Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF---MNRLNAKIALK 395 I N+T Q + ++L+ Y+ ++ ++++F + R +K AL+ Sbjct: 246 FYTVQVIYNRTQQVLPLLLVATLWYVVITSVLSVFQYYIERHFSKGALR 294 >gi|24379047|ref|NP_721002.1| putative glutamine ABC transporter, permease component [Streptococcus mutans UA159] gi|290580934|ref|YP_003485326.1| putative glutamine ABC transporter permease [Streptococcus mutans NN2025] gi|24376943|gb|AAN58308.1|AE014901_8 putative glutamine ABC transporter, permease component [Streptococcus mutans UA159] gi|254997833|dbj|BAH88434.1| putative glutamine ABC transporter permease component [Streptococcus mutans NN2025] Length = 228 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 44/121 (36%), Positives = 76/121 (62%), Gaps = 4/121 (3%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I LS + A+I+E+VR+G+ AVP+GQ+EAA +LG+ A R V+LPQA ++I+P L ++ Sbjct: 101 IVLSLNSGAYISEVVRAGIEAVPKGQLEAAYSLGIKPVNAMRYVILPQAFKNILPALGNE 160 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS----LSIMIALFMN 386 ++ ++K+SSL +G +L + +++ T + +L F YL +S ++ L N Sbjct: 161 FITIIKDSSLLQTIGVMELWNGAQSVVTATYLPLTPLLFGAFYYLMVTTLMSALVKLLEN 220 Query: 387 R 387 R Sbjct: 221 R 221 >gi|264680312|ref|YP_003280222.1| glutamate/aspartate transporterpermease gltK [Comamonas testosteroni CNB-2] gi|299532722|ref|ZP_07046110.1| glutamate/aspartate transport systempermease protein gltK [Comamonas testosteroni S44] gi|262210828|gb|ACY34926.1| glutamate/aspartate transport systempermease protein gltK [Comamonas testosteroni CNB-2] gi|298719357|gb|EFI60326.1| glutamate/aspartate transport systempermease protein gltK [Comamonas testosteroni S44] Length = 223 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 47/136 (34%), Positives = 79/136 (58%), Gaps = 1/136 (0%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G + E S I + AA+ +EI+R+G+ ++PRGQ+ A ALG+T+ + RLV+LPQ Sbjct: 87 GKPIGAE-TSAIITFVAFEAAYFSEIMRAGIQSIPRGQVFAGQALGMTYGQNMRLVVLPQ 145 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378 A R+++P L +Q + L +++SL A+G D++ G+ IE L Y + Sbjct: 146 AFRNMLPVLLTQTIILFQDTSLVYAIGAYDMLKGFEIAGKNFGRPIESYLAAAVTYFVIC 205 Query: 379 IMIALFMNRLNAKIAL 394 ++ F+ RL+ KIA+ Sbjct: 206 FALSWFVKRLHKKIAI 221 >gi|227877868|ref|ZP_03995884.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus crispatus JV-V01] gi|256844269|ref|ZP_05549755.1| glutamine ABC transporter permease [Lactobacillus crispatus 125-2-CHN] gi|262047651|ref|ZP_06020605.1| glutamine ABC transporter permease [Lactobacillus crispatus MV-3A-US] gi|293380559|ref|ZP_06626618.1| ABC transporter, permease protein [Lactobacillus crispatus 214-1] gi|295691987|ref|YP_003600597.1| amino acid ABC transporter, amino acid-binding/permease protein [Lactobacillus crispatus ST1] gi|312976974|ref|ZP_07788723.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Lactobacillus crispatus CTV-05] gi|227862530|gb|EEJ70033.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus crispatus JV-V01] gi|256613347|gb|EEU18550.1| glutamine ABC transporter permease [Lactobacillus crispatus 125-2-CHN] gi|260572051|gb|EEX28617.1| glutamine ABC transporter permease [Lactobacillus crispatus MV-3A-US] gi|290922873|gb|EFD99816.1| ABC transporter, permease protein [Lactobacillus crispatus 214-1] gi|295030093|emb|CBL49572.1| Amino acid ABC transporter, amino acid-binding/permease protein [Lactobacillus crispatus ST1] gi|310896302|gb|EFQ45367.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Lactobacillus crispatus CTV-05] Length = 494 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 63/202 (31%), Positives = 107/202 (52%), Gaps = 22/202 (10%) Query: 189 IFVFSFVLGIVLSLFAT--RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246 I +FS ++GI+L + RLS++ K + + YI I G P +V I Y Sbjct: 301 ITIFSVLIGIILGMLLALMRLSKN---KLLHWIAVCYIE--FIRGTPQMVQILFVY---- 351 Query: 247 DKPVLGQFNFIGGSTVS--PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304 F G+ +S ++ IA+ + A++AE +RSG+ +V +GQ EAA +LG Sbjct: 352 ---------FGVGALISNLSAVVAGIIAIGLNSGAYVAEDIRSGIASVAKGQTEAARSLG 402 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364 L+ KA R V++PQA+++I P L ++++ LLK+SSL +G +L+ I T + + Sbjct: 403 LSQAKAYRYVIIPQALKNIWPALGNEFITLLKDSSLVSVIGVTELMYQTELIQTSTYRGV 462 Query: 365 EIILIWMFIYLSLSIMIALFMN 386 + I M IY ++ + +N Sbjct: 463 LPLFIAMIIYFIMTFTLTRLLN 484 Score = 42.0 bits (97), Expect = 0.17, Method: Compositional matrix adjust. Identities = 19/41 (46%), Positives = 25/41 (60%) Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 I+G L+ RLS NKL+ WI Y+E R P +V I F+Y Sbjct: 311 ILGMLLALMRLSKNKLLHWIAVCYIEFIRGTPQMVQILFVY 351 >gi|126464227|ref|YP_001045340.1| polar amino acid ABC transporter, inner membrane subunit [Rhodobacter sphaeroides ATCC 17029] gi|126106038|gb|ABN78568.1| polar amino acid ABC transporter, inner membrane subunit [Rhodobacter sphaeroides ATCC 17029] Length = 219 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 55/160 (34%), Positives = 89/160 (55%), Gaps = 11/160 (6%) Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286 + I G P L+ I + ++F P LG +SP F + IAL + A++AEIVR Sbjct: 61 WFIRGTPALIQI---FIIYFGLPQLGL-------RLSP-FTAGVIALGINSGAYVAEIVR 109 Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346 SGL A+ RGQ E+A+ALG + + R ++LPQ R I+P +T++ ++ LKN+SL + Sbjct: 110 SGLSAIHRGQTESALALGFSQSQTMRTIVLPQVFRIILPSITNEAISTLKNTSLLSTITV 169 Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386 +L T+I+ T + + + IYL L+ ++ N Sbjct: 170 VELTLYAQTLISATFRPFDFYIAVAIIYLVLTTVLTQIAN 209 >gi|255326958|ref|ZP_05368034.1| permease protein of ABC transporter for glutamate [Rothia mucilaginosa ATCC 25296] gi|255296175|gb|EET75516.1| permease protein of ABC transporter for glutamate [Rothia mucilaginosa ATCC 25296] Length = 227 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 60/162 (37%), Positives = 81/162 (50%), Gaps = 23/162 (14%) Query: 193 SFVLGIVLSLF------ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246 SFVLG VL+L + R + T + PL + TF I G+ T ++QL F Sbjct: 34 SFVLGTVLALMRISPVPSLRWVGTAYVHTVRNTPLTIMMTFAILGVWT------QFQLSF 87 Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306 F F+ IALS Y +AFI E +RSG+ VP+GQ EAA A+GL Sbjct: 88 SHDFDTNF-----------FVYAVIALSIYHSAFICEAIRSGVNTVPKGQAEAARAIGLG 136 Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348 RLV+ PQA+R I PL + + L KNS++A A+ Sbjct: 137 FFGTARLVIFPQALRGAITPLGNTLIALTKNSTVASVASVAE 178 >gi|223042510|ref|ZP_03612559.1| L-cystine transport system permease protein TcyB [Staphylococcus capitis SK14] gi|222444173|gb|EEE50269.1| L-cystine transport system permease protein TcyB [Staphylococcus capitis SK14] Length = 239 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 52/155 (33%), Positives = 95/155 (61%), Gaps = 10/155 (6%) Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248 I + +F+LG+V++LF T L R K + + +Y+S +I G P +V + + + + Sbjct: 34 ITIVTFILGLVIALF-TALMRISTSKILRGIARVYVS--IIRGTPMIVQL---FIIFYGI 87 Query: 249 PVLGQF---NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305 P LG+ + T++P ++ I LS A+ +EI+R G+I++P+GQ EAA ++G+ Sbjct: 88 PELGRLITNDADNQWTLAPVVAAI-IGLSFNVGAYASEIIRGGIISIPKGQTEAAYSIGM 146 Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340 +R+ + ++LPQA+R IP L + +L L+K++SL Sbjct: 147 NYRQTVQRIILPQAIRVSIPALGNTFLGLIKDTSL 181 >gi|187933393|ref|YP_001887465.1| amino acid ABC transporter, amino acid-binding/permease protein [Clostridium botulinum B str. Eklund 17B] gi|188589667|ref|YP_001922409.1| amino acid ABC transporter, amino acid-binding/permease protein [Clostridium botulinum E3 str. Alaska E43] gi|251778834|ref|ZP_04821754.1| amino acid ABC transporter, amino acid-binding/permease protein [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|187721546|gb|ACD22767.1| amino acid ABC transporter, amino acid-binding/permease protein [Clostridium botulinum B str. Eklund 17B] gi|188499948|gb|ACD53084.1| amino acid ABC transporter, amino acid-binding/permease protein [Clostridium botulinum E3 str. Alaska E43] gi|243083149|gb|EES49039.1| amino acid ABC transporter, amino acid-binding/permease protein [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 219 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 36/111 (32%), Positives = 74/111 (66%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P+ + IAL+ ++A+++EI+R+G+ AV +GQMEAA +LG+ + A +++PQA ++I Sbjct: 85 PDITTGAIALALNSSAYVSEIIRAGIEAVDKGQMEAARSLGMNQKTAMINIIIPQAFKNI 144 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374 +P L +++++++K SS+ +G A+L+ T+ T +E +++ +Y Sbjct: 145 LPALGNEFISVIKESSMVSVIGVAELMYNANTVKGNTALGLEPVIVAAIVY 195 >gi|78062809|ref|YP_372717.1| glutamine ABC transporter permease protein [Burkholderia sp. 383] gi|77970694|gb|ABB12073.1| L-glutamine ABC transporter membrane protein [Burkholderia sp. 383] Length = 218 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 60/189 (31%), Positives = 97/189 (51%), Gaps = 17/189 (8%) Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249 V F++G++ +F R + K L +YI LI G P +V + L+F P Sbjct: 30 LVGGFIVGMIAGMF-----RAYGPKAMNVLAQVYIE--LIRGTPIVVQVMF---LYFALP 79 Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309 +L G + IA++ + A++AE+VR L+++P+G EA +A+GL+ + Sbjct: 80 LLAHIRIDG-------LTAAIIAITVNSGAYLAEVVRGALLSIPKGLTEAGLAMGLSMPR 132 Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369 V+ P A R +IPPL +Q + LK++SL + +G +L G II QA+EI Sbjct: 133 VLLKVVGPLAFRRLIPPLGNQCIVSLKDTSLFIVIGVGELTRKGQEIIAGNFQAVEIWTA 192 Query: 370 WMFIYLSLS 378 IYL L+ Sbjct: 193 VAVIYLLLT 201 Score = 37.0 bits (84), Expect = 5.5, Method: Compositional matrix adjust. Identities = 28/107 (26%), Positives = 52/107 (48%), Gaps = 13/107 (12%) Query: 96 TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSV 155 T ++AF G++ I+G + G R K + + +VY+E+ R P +V + FLY + Sbjct: 22 TVFIAFFGLVGGFIVGMIAGMFRAYGPKAMNVLAQVYIELIRGTPIVVQVMFLYFA---- 77 Query: 156 LPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL 202 LP+ H + GL+ + + N+ ++ V G +LS+ Sbjct: 78 LPLLAH---------IRIDGLTAAIIAITVNSGAYLAEVVRGALLSI 115 >gi|160935369|ref|ZP_02082751.1| hypothetical protein CLOBOL_00264 [Clostridium bolteae ATCC BAA-613] gi|158441727|gb|EDP19427.1| hypothetical protein CLOBOL_00264 [Clostridium bolteae ATCC BAA-613] Length = 215 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 43/129 (33%), Positives = 76/129 (58%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F ++ + + Y A+IAEI+RSG+ ++P+GQ EAA +GL R V+LPQ+ + +P Sbjct: 87 FSAVVLVYTLYGGAYIAEIIRSGIESIPKGQWEAAKCIGLNPVDVLRDVVLPQSFKISLP 146 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 L +L L+K++S+A +G+++L+ G TI+N TG E ++ IY + ++ ++ Sbjct: 147 ALIGFHLGLIKDTSIASIIGYSELLREGKTIMNVTGYPFETYILVAVIYFIICYPLSKYV 206 Query: 386 NRLNAKIAL 394 K L Sbjct: 207 GWTERKAGL 215 Score = 38.1 bits (87), Expect = 2.7, Method: Compositional matrix adjust. Identities = 22/66 (33%), Positives = 38/66 (57%) Query: 84 SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143 SY +L GF+ T L+ + +I +T++G + G N+ + + R+YVE+FR P L+ Sbjct: 9 SYWRLLLDGFLITLKLSLTVIITSTLLGVICGMLFTLKNRGIRGVLRIYVELFRGCPLLM 68 Query: 144 VIFFLY 149 +F Y Sbjct: 69 QLFMGY 74 >gi|116512666|ref|YP_811573.1| glutamate ABC transporter permease protein [Lactococcus lactis subsp. cremoris SK11] gi|116108320|gb|ABJ73460.1| amino acid ABC transporter membrane protein, PAAT family [Lactococcus lactis subsp. cremoris SK11] Length = 228 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 46/127 (36%), Positives = 78/127 (61%), Gaps = 4/127 (3%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I +S + A++AEIVR+G+ AVP GQ EAA +LG+ R+A V+LPQA+R+I+P + ++ Sbjct: 101 ILISLNSGAYMAEIVRAGIEAVPLGQKEAAYSLGIRPRQAMTTVILPQALRNILPAVGNE 160 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE----IILIWMFIYLSLSIMIALFMN 386 ++ ++K+SSL +G ++ + T+ N T Q I + L + + +S ++ LF Sbjct: 161 FVTIIKDSSLLYTIGVMEVFNGAQTVANLTYQTISPMIFVALYYFVVTFVVSRLLVLFEK 220 Query: 387 RLNAKIA 393 RL A Sbjct: 221 RLGKGYA 227 >gi|325275176|ref|ZP_08141143.1| polar amino acid ABC transporter inner membrane subunit [Pseudomonas sp. TJI-51] gi|324099663|gb|EGB97542.1| polar amino acid ABC transporter inner membrane subunit [Pseudomonas sp. TJI-51] Length = 223 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 58/204 (28%), Positives = 100/204 (49%), Gaps = 23/204 (11%) Query: 195 VLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248 VLG +L+L S+ G +++PLL + T+ +P L++ D Sbjct: 35 VLGTILALMRLSSSKLLSRLAGAYVNYFRSIPLLLVITWFYLAVP----FVLRWITGEDT 90 Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308 PV F S +A + AA+ EIVR+G+ ++ +GQM AA ALG+T+ Sbjct: 91 PV-------------GAFTSCVVAFMMFEAAYFCEIVRAGVQSISKGQMGAAQALGMTYS 137 Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368 + RL++LPQA R + P L Q + L +++SL VG D ++ + + G++ E ++ Sbjct: 138 QTMRLIILPQAFRKMTPLLLQQSIILFQDTSLVYTVGLVDFLNSARSNGDIIGRSHEFLI 197 Query: 369 IWMFIYLSLSIMIALFMNRLNAKI 392 +Y +S + + RL +I Sbjct: 198 FAGVVYFLISFSASWLVKRLQKRI 221 >gi|313497435|gb|ADR58801.1| Polar amino acid ABC transporter, inner membrane subunit [Pseudomonas putida BIRD-1] Length = 223 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 57/204 (27%), Positives = 99/204 (48%), Gaps = 23/204 (11%) Query: 195 VLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248 VLG +L+L S+ G +++PLL + T+ +P L++ D Sbjct: 35 VLGTILALMRLSSSKLLSNVAGAYVNYFRSIPLLLVITWFYLAVP----FVLRWITGEDT 90 Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308 PV F S +A + AA+ EIVR+G+ ++ +GQM AA ALG+ + Sbjct: 91 PV-------------GAFTSCVVAFMMFEAAYFCEIVRAGVQSISKGQMGAAQALGMNYA 137 Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368 + RL++LPQA R + P L Q + L +++SL VG D ++ + + G++ E ++ Sbjct: 138 QTMRLIILPQAFRKMTPLLLQQSIILFQDTSLVYTVGLVDFLNSARSNGDIIGRSHEFLI 197 Query: 369 IWMFIYLSLSIMIALFMNRLNAKI 392 +Y +S + + RL +I Sbjct: 198 FAGVVYFLISFSASWLVKRLQKRI 221 Score = 42.4 bits (98), Expect = 0.13, Method: Compositional matrix adjust. Identities = 27/69 (39%), Positives = 42/69 (60%) Query: 88 AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147 A+ G V T L G+I ++GT++ RLS++KL++ + YV FR+IP L+VI + Sbjct: 14 ALWEGMVMTLKLMVMGVIGGIVLGTILALMRLSSSKLLSNVAGAYVNYFRSIPLLLVITW 73 Query: 148 LYKSVLSVL 156 Y +V VL Sbjct: 74 FYLAVPFVL 82 >gi|226310806|ref|YP_002770700.1| glutamine ABC transporter permease protein [Brevibacillus brevis NBRC 100599] gi|226093754|dbj|BAH42196.1| glutamine ABC transporter permease protein [Brevibacillus brevis NBRC 100599] Length = 216 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 59/179 (32%), Positives = 94/179 (52%), Gaps = 27/179 (15%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 + LPLL I F F LP + + DK F + +AL + Sbjct: 63 RNLPLLLIIFFTYFALP-------EVGIKLDK-----------------FWAAVLALVIF 98 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 AA ++EIVRSGL +V +GQ+EAA + GL + + V+LPQA+R ++PP+ SQ+++LLK Sbjct: 99 EAAMLSEIVRSGLTSVEKGQIEAARSSGLNYVQTLWHVVLPQALRRMVPPIVSQFISLLK 158 Query: 337 NSSLAVAVGFADLVSVGGTIIN--QTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393 ++SLAV + +L++ IIN I L+ +Y ++ +++ RL K A Sbjct: 159 DTSLAVVIALPELMN-HAQIINGRNVNYVIPTFLMVAVMYFVVNYALSVVSKRLENKHA 216 Score = 37.0 bits (84), Expect = 4.9, Method: Compositional matrix adjust. Identities = 23/66 (34%), Positives = 38/66 (57%) Query: 84 SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143 S+ T +L GF+ T +AF ++ + I +VG R + V+ + VE+ RN+P L+ Sbjct: 10 SHLTFLLEGFLVTLQVAFLSIVFSFTIAIIVGVLRYAKIPGVSQVLGTIVELIRNLPLLL 69 Query: 144 VIFFLY 149 +IFF Y Sbjct: 70 IIFFTY 75 >gi|46579648|ref|YP_010456.1| His/Glu/Gln/Arg/opine ABC transporter permease [Desulfovibrio vulgaris str. Hildenborough] gi|46449063|gb|AAS95715.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Desulfovibrio vulgaris str. Hildenborough] Length = 256 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 55/178 (30%), Positives = 97/178 (54%), Gaps = 15/178 (8%) Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247 ++ VFS + I + L T L R + + Y+ ++ G+P LV QL + Sbjct: 61 QVTVFSIICSIPIGLI-TGLGRLSRNRGINLVASTYVE--VVRGIPLLV------QLFYI 111 Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307 LG+F + P+ ++ IALS A++ E+ R+G+ A+P+GQ EAA +LG Sbjct: 112 YYALGRFLKV------PDMLAAIIALSVCYGAYMGEVFRAGIEAIPKGQTEAARSLGFNR 165 Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365 + LV+LPQA R+I+PP+ ++++ +LK++SL + AD++ G +++ Q E Sbjct: 166 VETMFLVVLPQAWRTILPPVGNEFIAMLKDTSLVSIIAVADILRRGREFASESFQYFE 223 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 26/69 (37%), Positives = 40/69 (57%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151 G + TF + +I + IG + G GRLS N+ + + YVEV R IP LV +F++Y + Sbjct: 55 GILVTFQVTVFSIICSIPIGLITGLGRLSRNRGINLVASTYVEVVRGIPLLVQLFYIYYA 114 Query: 152 VLSVLPIPD 160 + L +PD Sbjct: 115 LGRFLKVPD 123 >gi|313144070|ref|ZP_07806263.1| amino acid ABC transporter [Helicobacter cinaedi CCUG 18818] gi|313129101|gb|EFR46718.1| amino acid ABC transporter [Helicobacter cinaedi CCUG 18818] Length = 246 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 37/114 (32%), Positives = 69/114 (60%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + + Y A+++E+VRSG+++VP+GQ EA+ + G T+ + R ++LPQ ++ I+PPLT+Q Sbjct: 118 LGVGAYHGAYVSEVVRSGILSVPKGQFEASASQGFTYTQQMRYIILPQTIKIILPPLTNQ 177 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 +NL+KN+S+ + V +++ V + T L +Y + +A F Sbjct: 178 MVNLIKNTSVLLIVAGGEIMYVADSYAGDTSNYAPAYLFTALLYFIVCYPLAYF 231 Score = 43.9 bits (102), Expect = 0.050, Method: Compositional matrix adjust. Identities = 25/66 (37%), Positives = 38/66 (57%) Query: 84 SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143 S+A L GF T ++ ++ A I GT+ G S K++ R+YVE+F+N P ++ Sbjct: 35 SHADEFLSGFGYTLSVSCLALLIALIFGTIGGVMATSRFKILKAYTRIYVEIFQNTPLVI 94 Query: 144 VIFFLY 149 IFFLY Sbjct: 95 QIFFLY 100 >gi|239618043|ref|YP_002941365.1| polar amino acid ABC transporter, inner membrane subunit [Kosmotoga olearia TBF 19.5.1] gi|239506874|gb|ACR80361.1| polar amino acid ABC transporter, inner membrane subunit [Kosmotoga olearia TBF 19.5.1] Length = 244 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 71/254 (27%), Positives = 125/254 (49%), Gaps = 28/254 (11%) Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTL--TMDTNAKIFVFSFVLGIVL 200 ++ F +Y S+ V P + S++L + R L F L T+ + S ++G ++ Sbjct: 16 LIFFSIYASLSKVYPF-NWSVILKY------RRLFFDGLMTTLRLSVTALGLSLLVGFII 68 Query: 201 SLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGS 260 +LF T E L ++Y+ F +P LV+I L Y IG Sbjct: 69 ALFRTSRILVLEE-----LGMIYVWFFR--NMPLLVIILLIYY------------GIGSV 109 Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320 F + I+L+ + A++ EI R+G+ AVPRG++EA ALG+ + ++ P+A+ Sbjct: 110 VAINRFWAGVISLALFEGAYVGEIFRAGIEAVPRGEIEAGEALGMYKYQIMGSIIFPRAL 169 Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380 R IPPL Q ++L+K+SSL + DL + QT ++E L+ YL+++ + Sbjct: 170 RISIPPLVGQMVSLVKDSSLVSVIALGDLTMRARQVGTQTLASLEAYLVLAGFYLAITSL 229 Query: 381 IALFMNRLNAKIAL 394 ++L L ++A+ Sbjct: 230 LSLVGRYLERRLAI 243 >gi|319408773|emb|CBI82430.1| glutamate/aspartate transport system permease protein GltJ [Bartonella schoenbuchensis R1] Length = 250 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 43/115 (37%), Positives = 73/115 (63%) Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 AL +T+A +AE VRSG+ ++ GQ AA+A+G T ++ R ++LP+A+R+I+PPLTS+ Sbjct: 120 ALGFFTSARVAEQVRSGIESISSGQRYAAMAMGFTTGQSYRYIILPRAIRTILPPLTSEA 179 Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386 + ++KNSS+A AV +L+ I + E LI +Y+ +++ I + M Sbjct: 180 MGIVKNSSIAFAVSINELMQFQYQTIEEVSHVYENYLIVTILYIVIALFIFIMMT 234 Score = 45.8 bits (107), Expect = 0.013, Method: Compositional matrix adjust. Identities = 29/79 (36%), Positives = 43/79 (54%), Gaps = 5/79 (6%) Query: 84 SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSA-----NKLVAWICRVYVEVFRN 138 +Y +L GF NT L+ S +I A +G ++G R N+++ I RV+VE+ RN Sbjct: 28 TYLDTLLDGFKNTAILSVSSLILAVFVGVIIGTIRTLPHTSIINRVLRAIGRVWVEIMRN 87 Query: 139 IPPLVVIFFLYKSVLSVLP 157 IP LV +F Y V + P Sbjct: 88 IPLLVQVFLWYFVVPKIYP 106 >gi|182435531|ref|YP_001823250.1| putative glutamate ABC transporter permease protein [Streptomyces griseus subsp. griseus NBRC 13350] gi|178464047|dbj|BAG18567.1| putative glutamate ABC transporter permease protein [Streptomyces griseus subsp. griseus NBRC 13350] Length = 215 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 47/127 (37%), Positives = 78/127 (61%), Gaps = 2/127 (1%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +AL YT++F+ E VRSG+ VP GQ EAA ++G+T + ++V+LPQA R++IPPL+S Sbjct: 90 LALGFYTSSFVCEAVRSGINTVPLGQAEAARSIGMTFAQTLQIVVLPQATRTVIPPLSSI 149 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI-YLSLSIMIALFMNRLN 389 ++ L KNS++A A A+L +++ G I + IW+ I YL ++ I+ L Sbjct: 150 FIALTKNSAIAGAFSVAELFG-WQKLMSDKGYDIVPVFIWVAIGYLVVTFTISGLFRLLE 208 Query: 390 AKIALKE 396 ++ + Sbjct: 209 RRMEVAR 215 >gi|34496729|ref|NP_900944.1| ABC transporter permease [Chromobacterium violaceum ATCC 12472] gi|34102584|gb|AAQ58949.1| probable permease of ABC transporter [Chromobacterium violaceum ATCC 12472] Length = 246 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 56/158 (35%), Positives = 89/158 (56%), Gaps = 5/158 (3%) Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV 262 ATRL H T PL+ FG+ L+ K L+ + ++ F+ + Sbjct: 58 LATRLFVGLHRNT----PLMVQLLLWYFGVSGLLPDEAKIWLNTPRALMLPFD-LALPWP 112 Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322 S EF++ + AL+ Y+AAFI+ +++GL AVP+GQ AA ALG++ + RLV+LPQA + Sbjct: 113 SFEFLAAFTALTLYSAAFISGELQAGLNAVPKGQRLAARALGMSGWQVLRLVVLPQAWQL 172 Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 + PL QY ++KN+SL +A+G A+L + +T Sbjct: 173 VKRPLVGQYTAIVKNTSLTMAIGLAELSYASRQVETET 210 >gi|315655535|ref|ZP_07908434.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Mobiluncus curtisii ATCC 51333] gi|315656552|ref|ZP_07909439.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Mobiluncus curtisii subsp. holmesii ATCC 35242] gi|315490190|gb|EFU79816.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Mobiluncus curtisii ATCC 51333] gi|315492507|gb|EFU82111.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Mobiluncus curtisii subsp. holmesii ATCC 35242] Length = 217 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 41/133 (30%), Positives = 77/133 (57%), Gaps = 1/133 (0%) Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320 + S F + IA S AA+ AEI R G A+P+GQ EAA LG + ++ + LPQ Sbjct: 82 SASYNFWAAIIAFSVNYAAYFAEIYRGGFQAIPQGQTEAAFVLGYSQQRTFYTIKLPQMF 141 Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380 R+++P +T++ + L+K++SLA + F ++ S+ + T + +F Y+ +++ Sbjct: 142 RTVLPSITNEVITLVKDTSLAQVISFLEMFSIAREYASTTASMAPFVAAGIFYYV-FNMV 200 Query: 381 IALFMNRLNAKIA 393 +A+ MN+L +++ Sbjct: 201 VAMTMNKLEKRVS 213 >gi|295394799|ref|ZP_06805014.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Brevibacterium mcbrellneri ATCC 49030] gi|294972395|gb|EFG48255.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Brevibacterium mcbrellneri ATCC 49030] Length = 220 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 51/157 (32%), Positives = 79/157 (50%), Gaps = 18/157 (11%) Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265 R + + T + PL + F +FGLP L + D + Sbjct: 47 RAAASVYITTVRNTPLTLVMFFCVFGLPFL-----DIRASHDSAI-------------NS 88 Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+ +AL YT+ F+AE++RSG+ +P GQ EAA A+GL + R V++PQA R++IP Sbjct: 89 FVLACVALIAYTSCFVAEVLRSGISTIPVGQAEAARAIGLNFGQTLRYVIMPQAFRTVIP 148 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362 PL S + +LKN+S+A A +++S I G Sbjct: 149 PLGSVIIAMLKNTSIASAFNNREIISAMRNAIEMRGD 185 >gi|239818082|ref|YP_002946992.1| polar amino acid ABC transporter inner membrane subunit [Variovorax paradoxus S110] gi|239804659|gb|ACS21726.1| polar amino acid ABC transporter, inner membrane subunit [Variovorax paradoxus S110] Length = 256 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 40/127 (31%), Positives = 76/127 (59%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +AL+ +AA+I+E+ R+G+ ++ RGQ +A ++G T + R V+LPQA R ++PPL + Sbjct: 129 VALTLNSAAYISEVFRAGIQSISRGQFDAGRSIGFTPLQVMRYVVLPQAFRRMLPPLGNN 188 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 + LLK++SL A+G A+L T+ + E L +Y +++++ + RL Sbjct: 189 AIALLKDTSLVSAIGLAELAYAARTVAGAYARYWEPYLAISVVYWVMTLVLTTMLRRLEH 248 Query: 391 KIALKEK 397 ++A ++ Sbjct: 249 RLARSDR 255 >gi|218550123|ref|YP_002383914.1| Amino acid ABC transporter permease [Escherichia fergusonii ATCC 35469] gi|218357664|emb|CAQ90305.1| putative Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Escherichia fergusonii ATCC 35469] Length = 506 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 62/206 (30%), Positives = 106/206 (51%), Gaps = 14/206 (6%) Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251 FS VLG +L+L A + R + +YI +L +P LVL+ Y L P L Sbjct: 34 FSIVLGFILAL-AKQSPRKLFNTPAR----IYI--WLFRSIPLLVLLIFVYNLPQAMPSL 86 Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311 S ++ F + IA+ AA+IAEI R GL+++P+GQ EAA ALG+ + Sbjct: 87 A-------SILNDPFRAGLIAMVLCEAAYIAEIHRGGLLSIPKGQSEAARALGMRYAGTQ 139 Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371 V++PQA+R +P L ++Y+ ++K SSL + +++ VG + +Q +E + Sbjct: 140 WRVVIPQALRVALPALANEYIAIVKLSSLVSVISLTEILMVGQRLYSQNFLVMETMAAVA 199 Query: 372 FIYLSLSIMIALFMNRLNAKIALKEK 397 F Y+ + + + RL + + ++ Sbjct: 200 FYYVFIVTVFDFLLKRLEKYLDVTQR 225 >gi|166365426|ref|YP_001657699.1| amino-acid ABC-transporter permease protein [Microcystis aeruginosa NIES-843] gi|166087799|dbj|BAG02507.1| amino-acid ABC-transporter permease protein [Microcystis aeruginosa NIES-843] Length = 503 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 52/159 (32%), Positives = 88/159 (55%), Gaps = 5/159 (3%) Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290 G P LV + L ++F P G F IG + + ALS AA++AEI+R G+ Sbjct: 335 GTPMLVQLFL---IYFGLP--GLFREIGLNIDLDRLPAALFALSLNVAAYLAEIMRGGIQ 389 Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 ++ GQ EA +LG++ + V+ QA R ++PPL ++++ L+K++SLA +GF +L Sbjct: 390 SIDNGQWEACSSLGMSPVQTMHEVIFSQAFRRMLPPLGNEFITLIKDTSLAAVIGFEELF 449 Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 G ++ T +A EI + +YL L+ + ++ RL Sbjct: 450 RQGQLMVATTYKAFEIYIAVAVVYLVLTTLSSVVFKRLE 488 Score = 38.1 bits (87), Expect = 2.6, Method: Compositional matrix adjust. Identities = 19/41 (46%), Positives = 25/41 (60%) Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 I GTLV +S K + ICR+YV+ FR P LV +F +Y Sbjct: 306 IGGTLVAIALISPYKWLKIICRIYVDFFRGTPMLVQLFLIY 346 >gi|90410650|ref|ZP_01218666.1| putative ABC-type amino acid transport system, permease component [Photobacterium profundum 3TCK] gi|90328891|gb|EAS45175.1| putative ABC-type amino acid transport system, permease component [Photobacterium profundum 3TCK] Length = 365 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 35/83 (42%), Positives = 61/83 (73%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I + ++AA++AE++R GL A+PRGQ EAA ALGL++ K+ L++LPQA++ IP + + Sbjct: 235 IGVVLFSAAYMAEVIRGGLQAIPRGQYEAADALGLSYWKSMYLIVLPQALKITIPSIVNT 294 Query: 331 YLNLLKNSSLAVAVGFADLVSVG 353 ++ L K++SL + +G D++ +G Sbjct: 295 FIGLFKDTSLVLIIGMFDVLGIG 317 >gi|325526097|gb|EGD03757.1| glutamine ABC transporter permease protein [Burkholderia sp. TJI49] Length = 218 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 61/205 (29%), Positives = 105/205 (51%), Gaps = 17/205 (8%) Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249 V FV+G++ +F R + K L +YI LI G P +V + L+F P Sbjct: 30 LVGGFVVGMIAGMF-----RAYGPKAMNVLAQVYIE--LIRGTPIVVQVMF---LYFALP 79 Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309 +L G + IA++ + A++AE+VR L+++P+G EA +A+GL+ + Sbjct: 80 LLAHIRIDG-------LTAAIIAITVNSGAYLAEVVRGALLSIPKGLTEAGLAMGLSMPR 132 Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369 ++ P A R +IPPL +Q + LK++SL + +G +L G II QA+EI Sbjct: 133 VLLKIVGPLAFRRLIPPLGNQCIVSLKDTSLFIVIGVGELTRKGQEIIAGNFQAVEIWSA 192 Query: 370 WMFIYLSLSIMIALFMNRLNAKIAL 394 IYL L+ ++ L + + ++ + Sbjct: 193 VAVIYLILTGVMTLTLRLVEKRMKI 217 Score = 36.6 bits (83), Expect = 7.7, Method: Compositional matrix adjust. Identities = 27/107 (25%), Positives = 52/107 (48%), Gaps = 13/107 (12%) Query: 96 TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSV 155 T ++AF G++ ++G + G R K + + +VY+E+ R P +V + FLY + Sbjct: 22 TVFIAFFGLVGGFVVGMIAGMFRAYGPKAMNVLAQVYIELIRGTPIVVQVMFLYFA---- 77 Query: 156 LPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL 202 LP+ H + GL+ + + N+ ++ V G +LS+ Sbjct: 78 LPLLAH---------IRIDGLTAAIIAITVNSGAYLAEVVRGALLSI 115 >gi|27365996|ref|NP_761524.1| amino acid ABC transporter permease [Vibrio vulnificus CMCP6] gi|27362196|gb|AAO11051.1| Amino acid ABC transporter, permease protein [Vibrio vulnificus CMCP6] Length = 365 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 37/98 (37%), Positives = 66/98 (67%) Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315 F+ + + + + I + ++AA++AE+VR GL A+P+GQ EAA ALGLT+ K L++ Sbjct: 220 FLSEGSETDKLIRALIGVVMFSAAYMAEVVRGGLQAIPKGQYEAADALGLTYWKKMGLII 279 Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353 LPQA++ IP + + ++ L K++SL + +G D++ +G Sbjct: 280 LPQALKITIPSIVNTFIGLFKDTSLVLIIGMFDVLGIG 317 >gi|50085184|ref|YP_046694.1| glutamate/aspartate ABC transporter membrane protein [Acinetobacter sp. ADP1] gi|49531160|emb|CAG68872.1| glutamate/aspartate transport protein (ABC superfamily, membrane) [Acinetobacter sp. ADP1] Length = 225 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 49/143 (34%), Positives = 79/143 (55%), Gaps = 3/143 (2%) Query: 254 FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313 F F + P F S+ I + + AAF +EIVRSG+ +V RGQ+ A ALG T+ ++ + Sbjct: 82 FEFQSDTYWGPLFSSV-ITFAIFEAAFFSEIVRSGIQSVSRGQVNAGYALGFTYGQSMKY 140 Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE--IILIWM 371 V+LPQA R+++P L +Q + L ++ SL + D + T+ N G + LI Sbjct: 141 VVLPQAFRNMLPVLLTQTIILFQDVSLVYVISAPDFLGRADTLANTYGPETKATFYLIVA 200 Query: 372 FIYLSLSIMIALFMNRLNAKIAL 394 +Y S +++ + RL KIA+ Sbjct: 201 VVYFCSSFLLSRLVKRLQQKIAI 223 Score = 41.2 bits (95), Expect = 0.30, Method: Compositional matrix adjust. Identities = 23/58 (39%), Positives = 32/58 (55%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 GF+ T + MI +IGT + RLS N + + + YV+VFR IP + VIF Y Sbjct: 18 GFIFTLTVTVLAMIGGIVIGTPLAMMRLSNNVVASNFAKFYVDVFRGIPLIQVIFIFY 75 >gi|221369815|ref|YP_002520911.1| Polar amino acid ABC transporter, inner membrane subunit [Rhodobacter sphaeroides KD131] gi|221162867|gb|ACM03838.1| Polar amino acid ABC transporter, inner membrane subunit [Rhodobacter sphaeroides KD131] Length = 219 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 55/160 (34%), Positives = 89/160 (55%), Gaps = 11/160 (6%) Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286 + I G P L+ I + ++F P LG +SP F + IAL + A++AEIVR Sbjct: 61 WFIRGTPALIQI---FIIYFGLPQLGL-------RLSP-FTAGVIALGINSGAYVAEIVR 109 Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346 SGL A+ RGQ E+A+ALG + + R ++LPQ R I+P +T++ ++ LKN+SL + Sbjct: 110 SGLSAIHRGQTESALALGFSQSQTMRTIVLPQVFRIILPSITNEAISTLKNTSLLSTITV 169 Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386 +L T+I+ T + + + IYL L+ ++ N Sbjct: 170 VELTLYAQTLISATFRPFDFYIAVAVIYLVLTTVLTQIAN 209 >gi|156977167|ref|YP_001448073.1| ABC transporter permease protein [Vibrio harveyi ATCC BAA-1116] gi|156528761|gb|ABU73846.1| hypothetical protein VIBHAR_05953 [Vibrio harveyi ATCC BAA-1116] Length = 306 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 45/144 (31%), Positives = 80/144 (55%) Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307 +P Q F G + + S + + ++A+IAE+VR+GL +V +GQ EAA +LGL+ Sbjct: 157 EPNAVQSFFFGPANLWENLASGVLCVGLLSSAYIAEVVRAGLQSVDKGQWEAADSLGLSS 216 Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367 R V+ PQ +++I P L Q ++L+K++S+ + ++ VG + N +G EI Sbjct: 217 WVKYRFVIAPQVLKAITPALAGQTISLVKDTSIVSLISIQEMTFVGTEMANSSGYIFEIW 276 Query: 368 LIWMFIYLSLSIMIALFMNRLNAK 391 LI F+Y + +++F + K Sbjct: 277 LIVGFVYFLICFGLSMFFRYIEKK 300 >gi|77465748|ref|YP_355251.1| ABC amino acid transporter, inner membrane subunit [Rhodobacter sphaeroides 2.4.1] gi|77390166|gb|ABA81350.1| ABC amino acid transporter, inner membrane subunit [Rhodobacter sphaeroides 2.4.1] Length = 219 Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 55/160 (34%), Positives = 89/160 (55%), Gaps = 11/160 (6%) Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286 + I G P L+ I + ++F P LG +SP F + IAL + A++AEIVR Sbjct: 61 WFIRGTPALIQI---FIIYFGLPQLGL-------RLSP-FTAGVIALGINSGAYVAEIVR 109 Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346 SGL A+ RGQ E+A+ALG + + R ++LPQ R I+P +T++ ++ LKN+SL + Sbjct: 110 SGLSAIHRGQTESALALGFSQSQTMRTIVLPQVFRIILPSITNEAISTLKNTSLLSTITV 169 Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386 +L T+I+ T + + + IYL L+ ++ N Sbjct: 170 VELTLYAQTLISATFRPFDFYIAVAVIYLVLTTVLTQIAN 209 >gi|16263639|ref|NP_436432.1| ABC transporter, permease [Sinorhizobium meliloti 1021] gi|14524350|gb|AAK65844.1| ABC transporter, permease [Sinorhizobium meliloti 1021] Length = 304 Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 53/175 (30%), Positives = 90/175 (51%), Gaps = 7/175 (4%) Query: 231 GLPTLVLIALKY-------QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283 G P LV + Y QL P + + +T+ + + L A+++E Sbjct: 115 GTPVLVQLIFWYNLGALFPQLSVGVPFTSLWVSVPTNTLISPVTAAVLGLGLNEGAYMSE 174 Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343 I+RSGL++V GQ +AA +LG+T+ K +LLPQAM IIPP +Q + +LK SSL Sbjct: 175 IIRSGLMSVDPGQRQAAKSLGMTNGKTLWRILLPQAMPVIIPPTGNQTIGMLKTSSLVSV 234 Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 + ADL+ TI ++ Q I ++++ YL+ + +++ R+ A ++ Sbjct: 235 ISLADLLYSAQTIYSRNFQTIPLLIVACIWYLAATTILSAVQVRIERHFARSSQR 289 >gi|320156511|ref|YP_004188890.1| amino acid ABC transporterpermease [Vibrio vulnificus MO6-24/O] gi|319931823|gb|ADV86687.1| amino acid ABC transporter, permease protein [Vibrio vulnificus MO6-24/O] Length = 365 Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 37/98 (37%), Positives = 66/98 (67%) Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315 F+ + + + + I + ++AA++AE+VR GL A+P+GQ EAA ALGLT+ K L++ Sbjct: 220 FLSEGSETDKLIRALIGVVMFSAAYMAEVVRGGLQAIPKGQYEAADALGLTYWKKMGLII 279 Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353 LPQA++ IP + + ++ L K++SL + +G D++ +G Sbjct: 280 LPQALKITIPSIVNTFIGLFKDTSLVLIIGMFDVLGIG 317 >gi|261252932|ref|ZP_05945505.1| amino acid ABC transporter permease protein [Vibrio orientalis CIP 102891] gi|260936323|gb|EEX92312.1| amino acid ABC transporter permease protein [Vibrio orientalis CIP 102891] Length = 365 Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 36/98 (36%), Positives = 66/98 (67%) Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315 F+ + + + + + + ++AA++AE+VR GL A+P+GQ EAA ALGLT+ K L++ Sbjct: 220 FLAEGSETDKLIRALVGVVMFSAAYMAEVVRGGLQAIPKGQYEAADALGLTYWKKMGLII 279 Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353 LPQA++ IP + + ++ L K++SL + +G D++ +G Sbjct: 280 LPQALKITIPSIVNTFIGLFKDTSLVLIIGMFDVLGIG 317 >gi|325498437|gb|EGC96296.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Escherichia fergusonii ECD227] Length = 506 Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 62/206 (30%), Positives = 106/206 (51%), Gaps = 14/206 (6%) Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251 FS VLG +L+L A + R + +YI +L +P LVL+ Y L P L Sbjct: 34 FSIVLGFILAL-AKQSPRKLFNTPAR----IYI--WLFRSIPLLVLLIFVYNLPQAMPSL 86 Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311 S ++ F + IA+ AA+IAEI R GL+++P+GQ EAA ALG+ + Sbjct: 87 A-------SILNDPFRAGLIAMVLCEAAYIAEIHRGGLLSIPKGQSEAARALGMRYAGTQ 139 Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371 V++PQA+R +P L ++Y+ ++K SSL + +++ VG + +Q +E + Sbjct: 140 WRVVIPQALRVALPALANEYIAIVKLSSLVSVISLTEILMVGQRLYSQNFLVMETMAAVA 199 Query: 372 FIYLSLSIMIALFMNRLNAKIALKEK 397 F Y+ + + + RL + + ++ Sbjct: 200 FYYVFIVTVFDFLLKRLEKYLDVTQR 225 >gi|254173251|ref|ZP_04879924.1| glutamine-binding periplasmic protein of glutamine ABC transporter [Thermococcus sp. AM4] gi|214032660|gb|EEB73489.1| glutamine-binding periplasmic protein of glutamine ABC transporter [Thermococcus sp. AM4] Length = 229 Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 58/205 (28%), Positives = 114/205 (55%), Gaps = 13/205 (6%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 V S LG+++ L L + KT + + ++Y T + G+P L+A+ + + + P+ Sbjct: 28 VLSIALGLLIGL-PVALMETYGGKTLRRIAMVYEGT--LRGIP---LLAIYFVIFYSMPM 81 Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 L G +SP F++ + L ++A+ ++I RSG+ AV GQ+EAA++LG++ + Sbjct: 82 LI------GLGLSP-FLAAVVGLGIRSSAYQSQIFRSGIQAVDEGQIEAAVSLGMSQWQI 134 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370 R ++LPQA+R IP ++Y+ +LK++S+A+A+G +L +++ T + + Sbjct: 135 IRHIVLPQALRMSIPAWMNEYVIVLKDTSIALALGIVELTRQATYLVSVTAEPFRYYGLA 194 Query: 371 MFIYLSLSIMIALFMNRLNAKIALK 395 YL++ + + F N + K +K Sbjct: 195 ALFYLAMVLPLTYFANWMGKKYGIK 219 >gi|293602701|ref|ZP_06685142.1| glutamate/aspartate ABC superfamily ATP binding cassette transporter, membrane protein [Achromobacter piechaudii ATCC 43553] gi|292818892|gb|EFF77932.1| glutamate/aspartate ABC superfamily ATP binding cassette transporter, membrane protein [Achromobacter piechaudii ATCC 43553] Length = 260 Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 45/130 (34%), Positives = 76/130 (58%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 +F+ + L Y +A +AE +R+G+ ++PRGQ +A ALGLT + R ++LP+A R ++ Sbjct: 109 QFVPAVLCLGFYGSARVAEQLRAGIQSLPRGQFQAGTALGLTEGQVYRYIILPEAFRIVL 168 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 PPLTS+++ +K SS+A+ +G +L ++ + E IYL L+ M+ L Sbjct: 169 PPLTSEFMGTIKYSSVALTIGLLELTGQARSMQEFSFHIFEAFSAATVIYLILNGMVVLG 228 Query: 385 MNRLNAKIAL 394 M L IA+ Sbjct: 229 MRLLERHIAV 238 Score = 38.5 bits (88), Expect = 2.0, Method: Compositional matrix adjust. Identities = 25/92 (27%), Positives = 49/92 (53%), Gaps = 4/92 (4%) Query: 84 SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143 ++ IL+G T LA + + + ++G+ +G R + +++ + YVE+FRN+P LV Sbjct: 20 TFLETILIGVGWTLALALTAWVFSLLLGSWLGVMRTAQSRVKNVLGATYVELFRNVPLLV 79 Query: 144 VIFFLYKSVLSVLP----IPDHSIVLPFGMFL 171 +F Y + +LP + + P+G F+ Sbjct: 80 QMFLWYFVLPELLPHAWGLAMKQMPQPWGQFV 111 >gi|291087041|ref|ZP_06345220.2| amino acid ABC transporter, permease/substrate-binding protein [Clostridium sp. M62/1] gi|291076279|gb|EFE13643.1| amino acid ABC transporter, permease/substrate-binding protein [Clostridium sp. M62/1] Length = 227 Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 43/127 (33%), Positives = 84/127 (66%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +AL +AA+++E++RSG+ AV +GQMEAA +LGL HR+A V+LPQA+++I+P L ++ Sbjct: 101 VALCLNSAAYVSEVIRSGIQAVDKGQMEAARSLGLNHRQAMVKVILPQAIKNIMPALGNE 160 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++ ++K++SLA +L++V T+ ++E ++I IY ++ ++ +N + Sbjct: 161 FVMMIKDTSLASTFFVGELMTVWQTVRGVLYLSLEPLIIVGCIYFIVTFSLSKGINFMER 220 Query: 391 KIALKEK 397 ++ E+ Sbjct: 221 RMRANER 227 >gi|221065075|ref|ZP_03541180.1| polar amino acid ABC transporter, inner membrane subunit [Comamonas testosteroni KF-1] gi|220710098|gb|EED65466.1| polar amino acid ABC transporter, inner membrane subunit [Comamonas testosteroni KF-1] Length = 223 Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 47/136 (34%), Positives = 79/136 (58%), Gaps = 1/136 (0%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G + E S I + AA+ +EI+R+G+ ++PRGQ+ A ALG+T+ + RLV+LPQ Sbjct: 87 GKPIGAE-TSAIITFVAFEAAYFSEIMRAGIQSIPRGQVFAGQALGMTYGQNMRLVVLPQ 145 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378 A R+++P L +Q + L +++SL A+G D++ G+ IE L Y + Sbjct: 146 AFRNMLPVLLTQTIILFQDTSLVYAIGAYDMLKGFEIAGKNFGRPIESYLAAAVTYFVIC 205 Query: 379 IMIALFMNRLNAKIAL 394 ++ F+ RL+ KIA+ Sbjct: 206 FALSWFVKRLHKKIAI 221 >gi|56697501|ref|YP_167869.1| glutamate/aspartate ABC transporter, permease protein [Ruegeria pomeroyi DSS-3] gi|56679238|gb|AAV95904.1| glutamate/aspartate ABC transporter, permease protein [Ruegeria pomeroyi DSS-3] Length = 238 Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 57/174 (32%), Positives = 89/174 (51%), Gaps = 16/174 (9%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 + +PLL F LP +V + + D P +PE+++ + L Y Sbjct: 67 RNVPLLVQLFLWYFVLPEIVPSDMGRWMKRDMP-------------NPEYVTAVVGLGLY 113 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 TA+ +AE VR+G+ AV G AA A GL+ + R VLLP + R I+PP+TS++L + K Sbjct: 114 TASRVAEQVRAGINAVGGGLTSAAYANGLSTAQTYRYVLLPISFRLIVPPMTSEFLTIFK 173 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI---MIALFMNR 387 NSSLA+ +G +L + I T Q E IY+ +++ +IA + R Sbjct: 174 NSSLALTIGLLELTAQSQQIAEYTFQGFEAFTAATVIYVVIALCATVIAQILER 227 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 27/76 (35%), Positives = 42/76 (55%) Query: 82 DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141 + Y ++ G TF +A + A +G LVG GR ++ VA +C YVE+FRN+P Sbjct: 12 EEEYLGWLISGVGWTFSVALVAWVLALAVGILVGVGRTLPSRPVALLCTTYVEIFRNVPL 71 Query: 142 LVVIFFLYKSVLSVLP 157 LV +F Y + ++P Sbjct: 72 LVQLFLWYFVLPEIVP 87 >gi|50123396|ref|YP_052563.1| amino acid ABC transporter permease [Pectobacterium atrosepticum SCRI1043] gi|49613922|emb|CAG77375.1| probable amino acid ABC transporter, permease protein [Pectobacterium atrosepticum SCRI1043] Length = 231 Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 46/119 (38%), Positives = 72/119 (60%) Query: 260 STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319 ++ + EF+ AL AA+ +E +RSGL A+P GQ EA+ ALG++ ++ R V+LPQ Sbjct: 93 NSFNAEFLFSMFALGLCQAAYFSEDIRSGLRAIPDGQNEASRALGMSFMRSMRSVILPQG 152 Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378 +R+ +P L + + L KN+SLA+ +G A+L + + NQT + E LI YL S Sbjct: 153 IRNALPSLINHTVLLFKNTSLAMVIGVAELTYITRDLENQTFRTFEAYLIGTLGYLIFS 211 Score = 37.4 bits (85), Expect = 4.1, Method: Compositional matrix adjust. Identities = 21/73 (28%), Positives = 37/73 (50%) Query: 85 YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144 YA I+ G + T LA + A I ++ RL+ ++ W+ YV RN+P L+ Sbjct: 13 YADVIVEGAMITLKLAVGAWLLAMFIALILLVIRLTERRVAIWLVAAYVSYHRNVPTLIQ 72 Query: 145 IFFLYKSVLSVLP 157 + Y ++ ++LP Sbjct: 73 LMMWYFAIPTLLP 85 >gi|322616304|gb|EFY13213.1| glutamine ABC transporter permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322619554|gb|EFY16429.1| glutamine ABC transporter permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322622750|gb|EFY19595.1| glutamine ABC transporter permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322628662|gb|EFY25449.1| glutamine ABC transporter permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322631599|gb|EFY28355.1| glutamine ABC transporter permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322637126|gb|EFY33829.1| glutamine ABC transporter permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322641674|gb|EFY38310.1| glutamine ABC transporter permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322644531|gb|EFY41071.1| glutamine ABC transporter permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322648465|gb|EFY44917.1| glutamine ABC transporter permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322654200|gb|EFY50523.1| glutamine ABC transporter permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322658115|gb|EFY54382.1| glutamine ABC transporter permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322663589|gb|EFY59791.1| glutamine ABC transporter permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322670325|gb|EFY66465.1| glutamine ABC transporter permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322671561|gb|EFY67683.1| glutamine ABC transporter permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322676917|gb|EFY72984.1| glutamine ABC transporter permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322682842|gb|EFY78861.1| glutamine ABC transporter permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322686521|gb|EFY82503.1| glutamine ABC transporter permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323194582|gb|EFZ79775.1| glutamine ABC transporter permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323199087|gb|EFZ84183.1| glutamine ABC transporter permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323202042|gb|EFZ87101.1| glutamine ABC transporter permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323208932|gb|EFZ93869.1| glutamine ABC transporter permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323213917|gb|EFZ98687.1| glutamine ABC transporter permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323215231|gb|EFZ99976.1| glutamine ABC transporter permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323220849|gb|EGA05287.1| glutamine ABC transporter permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323227291|gb|EGA11459.1| glutamine ABC transporter permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323229909|gb|EGA14032.1| glutamine ABC transporter permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323233134|gb|EGA17230.1| glutamine ABC transporter permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323240869|gb|EGA24911.1| glutamine ABC transporter permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323243186|gb|EGA27206.1| glutamine ABC transporter permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323248725|gb|EGA32653.1| glutamine ABC transporter permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323251729|gb|EGA35596.1| glutamine ABC transporter permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323257541|gb|EGA41229.1| glutamine ABC transporter permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323261456|gb|EGA45037.1| glutamine ABC transporter permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323267887|gb|EGA51366.1| glutamine ABC transporter permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323272046|gb|EGA55461.1| glutamine ABC transporter permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] Length = 219 Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 63/212 (29%), Positives = 114/212 (53%), Gaps = 14/212 (6%) Query: 186 NAKIFVFSFVLGIVLSL---FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY 242 AK+ ++ VLG+ L A +R F + LL+I +I G P +V + Y Sbjct: 18 GAKMTLWISVLGLAGGLVIGLAAGFARTFGGWFANHIALLFIE--IIRGTPIVVQVMFIY 75 Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302 F P+ FN + + P F + + + + A+IAEI R ++++ +G EA +A Sbjct: 76 ---FALPM--AFNDL---RIDP-FSAAVVTIMINSGAYIAEITRGAVLSIHKGFREAGLA 126 Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362 LGL+ R+ R V+LP A+R ++PPL +Q++ +K++SL + +G A+L G II + Sbjct: 127 LGLSRRETIRHVILPLALRRMLPPLGNQWIISIKDTSLFIVIGVAELTRQGQEIIAGNFR 186 Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394 A+EI YL ++++++ + RL ++ + Sbjct: 187 ALEIWSAVAVFYLIITLVLSFILRRLERRMKI 218 >gi|317047480|ref|YP_004115128.1| polar amino acid ABC transporter inner membrane subunit [Pantoea sp. At-9b] gi|316949097|gb|ADU68572.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea sp. At-9b] Length = 219 Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 59/207 (28%), Positives = 110/207 (53%), Gaps = 14/207 (6%) Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY-QLHFD 247 I V V G+++ L A +R + + L++I LI G P +V + Y L Sbjct: 25 ISVLGLVGGLIIGLVAG-FARAYGGWIANNIALVFIE--LIRGTPIVVQVMFIYFALPMA 81 Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307 P L + P F + + + + A+IAEI R ++++ +G EA +ALGL+ Sbjct: 82 FPDL---------RIDP-FTAAVVTIMINSGAYIAEITRGAVLSINKGFREAGLALGLSR 131 Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367 R+ R V++P A+R ++PPL +Q++ +K++SL + +G A+L G II +A+EI Sbjct: 132 RETLRYVIMPLALRRMLPPLGNQWIVSIKDTSLFIVIGVAELTRQGQEIIAGNFRALEIW 191 Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIAL 394 IYL ++++++ + R+ ++ + Sbjct: 192 SAVAIIYLVITLVLSFVLRRIEKRVKI 218 >gi|296139696|ref|YP_003646939.1| polar amino acid ABC transporter inner membrane subunit [Tsukamurella paurometabola DSM 20162] gi|296027830|gb|ADG78600.1| polar amino acid ABC transporter, inner membrane subunit [Tsukamurella paurometabola DSM 20162] Length = 316 Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 74/219 (33%), Positives = 110/219 (50%), Gaps = 32/219 (14%) Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF----LIFGLPTLV 236 LT+ A F FVLGI L+ A RL PLL +F ++ +P LV Sbjct: 74 LTLWLTAVTFTAGFVLGIGLA--AMRL---------WGGPLLQSVSFGFVWIVRSVPPLV 122 Query: 237 LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL------------YIALSCYTAAFIAEI 284 L+ +QL P L G PEF++ +IAL+ AAF AEI Sbjct: 123 LLLFWFQLASLYPQLSL-----GIPFGPEFVTFNTTHLIAPLVAAFIALTLDVAAFAAEI 177 Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344 VR GL++V GQ EAA +LGL R+ R ++LPQAM +IIP + + LLK++SL + Sbjct: 178 VRGGLVSVDPGQTEAARSLGLNPRRIFRRIVLPQAMPAIIPSSGNLLIGLLKSTSLVSVI 237 Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 DL+ I NQ + + ++L+ Y+ ++ ++A+ Sbjct: 238 AVTDLLYSVQLIYNQNFKVMPLLLVATIWYIVITSVLAI 276 >gi|117621263|ref|YP_855305.1| glutamine transport system permease protein GlnP [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117562670|gb|ABK39618.1| glutamine transport system permease protein GlnP [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 220 Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 40/97 (41%), Positives = 62/97 (63%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P F + L+ + A+ + E+VR GL ++ RGQ EA +ALGL+ + R VLLPQA++ + Sbjct: 88 PAFWCAVLVLALWGASEVGEVVRGGLGSLARGQQEAGLALGLSRWQLYRHVLLPQALQRL 147 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 PP + Y ++K SSLAV +G +++ VG II +T Sbjct: 148 TPPTINIYTRIIKTSSLAVLIGVVEVIKVGQQIIERT 184 >gi|89897022|ref|YP_520509.1| hypothetical protein DSY4276 [Desulfitobacterium hafniense Y51] gi|89336470|dbj|BAE86065.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 223 Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 38/87 (43%), Positives = 60/87 (68%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P F + + Y A+IAE+VR+G+ A+ RGQMEAA++ G ++ A R V+LPQA R + Sbjct: 91 PVFSVGVLGVGVYHGAYIAEVVRAGIQAIHRGQMEAALSQGFSYWGAMRHVILPQAARVV 150 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLV 350 +PPLT+Q ++L+KN+S+ + DL+ Sbjct: 151 LPPLTNQAVSLIKNTSVLAMIAGGDLM 177 >gi|220914744|ref|YP_002490052.1| polar amino acid ABC transporter, inner membrane subunit [Methylobacterium nodulans ORS 2060] gi|219952495|gb|ACL62885.1| polar amino acid ABC transporter, inner membrane subunit [Methylobacterium nodulans ORS 2060] Length = 394 Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 43/131 (32%), Positives = 75/131 (57%), Gaps = 3/131 (2%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +A+ + AA++AE+VR GL +P+GQ EAA ALGL + T ++LPQA+R +IPPL + Sbjct: 264 VAVILFAAAYLAEVVRGGLQTLPKGQYEAADALGLGYWHKTAFIILPQALRLVIPPLVNT 323 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQ---TGQAIEIILIWMFIYLSLSIMIALFMNR 387 ++ K++SL + +G DL++ G + + E+ L+ IY + ++A + Sbjct: 324 FIGFFKDTSLVLIIGLFDLLTAGKVAMADLVWQPYSTEVYLVLAAIYFAFCYVMARYSRG 383 Query: 388 LNAKIALKEKK 398 L + K+ Sbjct: 384 LEQGFSRSTKR 394 >gi|126724326|ref|ZP_01740169.1| ABC-type glutamine transport system, permease component [Rhodobacterales bacterium HTCC2150] gi|126705490|gb|EBA04580.1| ABC-type glutamine transport system, permease component [Rhodobacterales bacterium HTCC2150] Length = 253 Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 58/226 (25%), Positives = 112/226 (49%), Gaps = 28/226 (12%) Query: 183 MDTNAKIFVFSFVLGIVLSLFAT----------RLSRHFHEKTGKALPLLYISTFLIFGL 232 M + +I V + + I+L L R+ + + +++PLL + ++ +GL Sbjct: 46 MASTIQISVIAAAISIILGLLVALPGQSSKRGWRIVSRIYVEFIRSIPLLPMLFWVFYGL 105 Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292 P L+ ++ + D F I L+ +AF AEI RSG+ ++ Sbjct: 106 P-LIFKSMGLNIPIDP-----------------FWGAIITLAVSDSAFTAEIYRSGIQSI 147 Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352 +GQ EAA +GL++ + R V+LPQA+R I+PP+ +Q++ ++K S+ A +G +L Sbjct: 148 SKGQTEAAQTVGLSYAQTMRYVILPQAIRRILPPIANQFIYIVKMSAFASVIGMQELTRR 207 Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 ++ + +EI + + YL L ++I+ + L ++ E+K Sbjct: 208 ANELVVTEYRPLEIYSLLIVEYLILVLIISAGVRWLERRMGSDERK 253 >gi|77456454|ref|YP_345959.1| amino acid ABC transporter permease [Pseudomonas fluorescens Pf0-1] gi|77380457|gb|ABA71970.1| amino acid ABC transporter membrane protein 2, PAAT family [Pseudomonas fluorescens Pf0-1] Length = 209 Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 53/146 (36%), Positives = 80/146 (54%), Gaps = 10/146 (6%) Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280 LL I L +P LV + Y L F P+ F G S P F + LS + A+ Sbjct: 45 LLRIYLELFRAIPVLVWL---YLLFFGLPI-----FFGLSL--PSFWCAVLVLSLWGASE 94 Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340 + E+ R L ++PRGQ EA +++GL + VLLPQA++ + PP + Y ++K SSL Sbjct: 95 VGEVARGALHSLPRGQREAGLSIGLNAAQLYGYVLLPQALKRMTPPTINVYTRIIKTSSL 154 Query: 341 AVAVGFADLVSVGGTIINQTGQAIEI 366 AV +G D++ VG II +T +++ I Sbjct: 155 AVLIGVVDVIKVGQQIIERTYESVLI 180 >gi|332180369|gb|AEE16057.1| polar amino acid ABC transporter, inner membrane subunit [Treponema brennaborense DSM 12168] Length = 230 Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 39/128 (30%), Positives = 79/128 (61%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 +FMS I + +AA++ EI RSG+ +V +GQ EA +LGL++ + +++PQA+R+++ Sbjct: 99 DFMSGVITMGMNSAAYVCEIFRSGIQSVDKGQTEAGRSLGLSYPRTLAHIIIPQAVRNVL 158 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 P L ++++ ++K SS+ +G ADL+ T+ T Q E +L+ +Y ++ ++ Sbjct: 159 PALGNEFVVVIKESSIVSIIGIADLMYKANTVRGNTFQPFEPLLVAAVVYFLMTFPLSKL 218 Query: 385 MNRLNAKI 392 + R+ ++ Sbjct: 219 LARIEKRM 226 Score = 37.7 bits (86), Expect = 3.0, Method: Compositional matrix adjust. Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 1/79 (1%) Query: 83 SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142 S Y + L+G NT L+ + T G L+ R+S N+ + ++ YVE R P L Sbjct: 7 SRYWSFYLIGAKNTILLSLIAVALGTCFGMLLAMCRISKNRGLRFLGTAYVEFIRGTPLL 66 Query: 143 VVIFFLYKSVLSV-LPIPD 160 V +F +Y + ++ + PD Sbjct: 67 VQLFIIYYGLQAIGIRFPD 85 >gi|261404062|ref|YP_003240303.1| polar amino acid ABC transporter inner membrane subunit [Paenibacillus sp. Y412MC10] gi|261280525|gb|ACX62496.1| polar amino acid ABC transporter, inner membrane subunit [Paenibacillus sp. Y412MC10] Length = 482 Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 52/176 (29%), Positives = 94/176 (53%), Gaps = 23/176 (13%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 + +PLL ++ F+ FG+P F F T+SP ++ + LS Sbjct: 327 RGIPLLVLAFFIYFGIPQ------------------AFGF----TMSP-IVAAVLTLSLN 363 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 A++ EI+R G+ ++ GQ+EAA +LGL +RKA +++PQA++ +IP +Q + LK Sbjct: 364 AGAYVTEIIRGGIQSIDPGQLEAARSLGLPYRKAMMKIIIPQAIKVMIPTFINQLVITLK 423 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 ++S+ +G +L G II +T + +I L+ +YL + ++ +RL K+ Sbjct: 424 DTSILSVIGLVELTQSGKIIIARTFASFDIWLVVAIMYLVVITILTKISDRLERKV 479 Score = 38.1 bits (87), Expect = 2.5, Method: Compositional matrix adjust. Identities = 21/62 (33%), Positives = 35/62 (56%) Query: 88 AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147 ++L G NT L + A +G + G ++ N+ + I V+V++FR IP LV+ FF Sbjct: 278 SLLKGLGNTLLLTIVSLFFAFFLGLIFGFMKVGRNRWLRGIATVFVDIFRGIPLLVLAFF 337 Query: 148 LY 149 +Y Sbjct: 338 IY 339 >gi|158424357|ref|YP_001525649.1| ABC transporter permease protein [Azorhizobium caulinodans ORS 571] gi|158331246|dbj|BAF88731.1| ABC transporter permease protein [Azorhizobium caulinodans ORS 571] Length = 278 Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 64/203 (31%), Positives = 108/203 (53%), Gaps = 12/203 (5%) Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFN 255 +GIVL + T + R + + + Y+ +L G P ++ + L + L P LG Sbjct: 75 VGIVLGVI-TAIMRMSPNPVLRGVAMGYV--WLFRGTPVILQLLLWFNLALIFPRLGISG 131 Query: 256 FIGGSTVSPEFMSLYIA----LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311 + TV E M+ +A L A+ +E+VR+GL+AV GQ EAA A+G+T A Sbjct: 132 WWTVRTV--EVMTPVVAALLGLGINQGAYTSEVVRAGLLAVDTGQYEAAKAIGMTRLLAL 189 Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL--- 368 R ++LPQAMR IIPPL ++++ ++K +SLA + F +++ I + IE+++ Sbjct: 190 RRIVLPQAMRVIIPPLGNEFIGMVKLTSLASVIQFTEILHSAQNIYYANSRVIELLIVAA 249 Query: 369 IWMFIYLSLSIMIALFMNRLNAK 391 IW +SL + + + R A+ Sbjct: 250 IWYLAIVSLLTPLQMLLERRFAR 272 >gi|258654116|ref|YP_003203272.1| polar amino acid ABC transporter inner membrane subunit [Nakamurella multipartita DSM 44233] gi|258557341|gb|ACV80283.1| polar amino acid ABC transporter, inner membrane subunit [Nakamurella multipartita DSM 44233] Length = 307 Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 52/162 (32%), Positives = 93/162 (57%), Gaps = 12/162 (7%) Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291 +P ++L+ +QL F +LG T SP F ++ I L Y + +AE+ R+G++A Sbjct: 116 IPVIILMLFAFQLWF--AILG--------TSSP-FAAVVIGLVLYNGSVLAEVFRAGILA 164 Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL-AVAVGFADLV 350 VP+GQ EAA ALGL + L+LLPQA+ S++P + SQ + ++K+++L + VG+ +L Sbjct: 165 VPKGQSEAAYALGLRKTQVMTLILLPQAVTSMLPAVVSQLVVIVKDTALGGILVGYVELR 224 Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 T + G + ++ IY+ +++ + F + L K+ Sbjct: 225 RAANTSASNYGNLLPTYVVVALIYILINLALGWFSHWLERKL 266 Score = 44.7 bits (104), Expect = 0.028, Method: Compositional matrix adjust. Identities = 38/165 (23%), Positives = 75/165 (45%), Gaps = 22/165 (13%) Query: 14 SRMKFLYDM-----RVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERA 68 R LYD+ R N+ + ++ ++L + W ++ + +EK+ L+ +E+ Sbjct: 3 ERATVLYDIPGPKARRLNLILSVVFGIVLAALVWWIISVL---IEKNQLT------AEKW 53 Query: 69 GFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWI 128 P+ ++ T +L G T A ++ A IG + G R+S + V W+ Sbjct: 54 S--------PFLEIQNWTTYLLPGLWATLQAAALSVVIALPIGAIFGIARMSDHTWVRWV 105 Query: 129 CRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNN 173 V VE FR+IP ++++ F ++ ++L + G+ L N Sbjct: 106 AGVVVEFFRSIPVIILMLFAFQLWFAILGTSSPFAAVVIGLVLYN 150 >gi|13473305|ref|NP_104872.1| amino acid ABC transporter (permease) [Mesorhizobium loti MAFF303099] gi|14024053|dbj|BAB50658.1| amino acid ABC transporter (permease) [Mesorhizobium loti MAFF303099] Length = 226 Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 59/203 (29%), Positives = 109/203 (53%), Gaps = 20/203 (9%) Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF---GLPTLVLIALKYQLHFDKP 249 SFVLG+ + L A L R F K PL+ + F ++ G P LV + L + + P Sbjct: 30 SFVLGLTVGLGAA-LGRLFGPK-----PLVMLVRFYVWIFRGTPLLVQLFL---IFYGLP 80 Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309 +G + F + I + A+ +EI+R+ + +VP+GQ EAA ++G+T + Sbjct: 81 SVG--------ILLDAFTAALIGFTLNIGAYTSEIIRAAIGSVPKGQWEAAYSIGMTWSQ 132 Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369 A R +LPQA R +PPL++ +++L+K++SLA A+ ++ I+ T + + + + Sbjct: 133 AMRRTILPQAGRVAVPPLSNTFISLVKDTSLAAAITVPEMFQAAQRIVATTYEPLILYVE 192 Query: 370 WMFIYLSLSIMIALFMNRLNAKI 392 +YL++S +++ RL ++ Sbjct: 193 AAILYLAMSSVLSALQTRLEERL 215 >gi|224437619|ref|ZP_03658572.1| putative ABC-type amino-acid transporter permease protein [Helicobacter cinaedi CCUG 18818] Length = 252 Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 37/114 (32%), Positives = 69/114 (60%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + + Y A+++E+VRSG+++VP+GQ EA+ + G T+ + R ++LPQ ++ I+PPLT+Q Sbjct: 124 LGVGAYHGAYVSEVVRSGILSVPKGQFEASASQGFTYTQQMRYIILPQTIKIILPPLTNQ 183 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 +NL+KN+S+ + V +++ V + T L +Y + +A F Sbjct: 184 MVNLIKNTSVLLIVAGGEIMYVADSYAGDTSNYAPAYLFTALLYFIVCYPLAYF 237 Score = 43.9 bits (102), Expect = 0.048, Method: Compositional matrix adjust. Identities = 25/66 (37%), Positives = 38/66 (57%) Query: 84 SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143 S+A L GF T ++ ++ A I GT+ G S K++ R+YVE+F+N P ++ Sbjct: 41 SHADEFLSGFGYTLSVSCLALLIALIFGTIGGVMATSRFKILKAYTRIYVEIFQNTPLVI 100 Query: 144 VIFFLY 149 IFFLY Sbjct: 101 QIFFLY 106 >gi|222082848|ref|YP_002542213.1| amino acid ABC transporter [Agrobacterium radiobacter K84] gi|221727527|gb|ACM30616.1| amino acid ABC transporter [Agrobacterium radiobacter K84] Length = 231 Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 69/218 (31%), Positives = 108/218 (49%), Gaps = 26/218 (11%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV-LIALKYQLHFDKP 249 V S G++L F L R + K L +YI +L G P LV LIAL L P Sbjct: 30 VVSLTAGLILG-FVLALMRRSPFRLAKTLAKIYI--WLFRGTPLLVQLIALYTAL----P 82 Query: 250 VLG-QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308 G +F I + I L+ AA++AEI+R+G+ AVP GQ AA ALG+T R Sbjct: 83 QFGIRFTVIEAA---------LIGLALNEAAYLAEIIRAGIEAVPEGQARAARALGMTER 133 Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368 + R +++PQA + IIPPL + LLK +S+ + +L+ +I + +E+ Sbjct: 134 QIMRHIVMPQAFKVIIPPLGNSVNGLLKTTSVTSVISMEELLRRTQVLIQEHFMVLELFA 193 Query: 369 IWMFIYLSLSIMIALFMNRL--------NAKIALKEKK 398 + YL L+ + N + N+++++ EK+ Sbjct: 194 VAAIYYLLLTTLWDFVQNHIEKRFGQATNSRLSVTEKR 231 >gi|254933324|ref|ZP_05266683.1| amino acid ABC transporter [Listeria monocytogenes HPB2262] gi|293584885|gb|EFF96917.1| amino acid ABC transporter [Listeria monocytogenes HPB2262] Length = 238 Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 67/211 (31%), Positives = 109/211 (51%), Gaps = 24/211 (11%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 +F F+LG++LSL R + L +YIS F G P +V + + + + P Sbjct: 33 IFGFILGVLLSL-----PRIYKIPVLDQLARVYISFFR--GTPIMVQL---FIVFYGIPA 82 Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCY---TAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307 L I S + P LY A++ Y +AA IAE++R+G+ +V GQ EAA ++GL+ Sbjct: 83 LSSIVGIDLSQMDP----LYAAIATYALSSAATIAEVIRAGVNSVDAGQAEAAYSIGLSS 138 Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367 R+ ++LPQA+ +P + + LK++SLA ++G D+ G T+I + A+E Sbjct: 139 RQTFLRIILPQALYQALPNFGNLVIGYLKDTSLAFSIGVMDMSGKGQTLITLSNHALE-- 196 Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 +Y+SLSI+ L L EK+ Sbjct: 197 -----VYISLSIIYYLTAVLLEYSFKWIEKR 222 >gi|83747886|ref|ZP_00944918.1| Hypothetical Protein RRSL_03142 [Ralstonia solanacearum UW551] gi|207739276|ref|YP_002257669.1| amino acid transmembrane protein [Ralstonia solanacearum IPO1609] gi|83725419|gb|EAP72565.1| Hypothetical Protein RRSL_03142 [Ralstonia solanacearum UW551] gi|206592649|emb|CAQ59555.1| amino acid transmembrane protein [Ralstonia solanacearum IPO1609] Length = 233 Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 57/151 (37%), Positives = 83/151 (54%), Gaps = 14/151 (9%) Query: 245 HFDKPVLGQ--FNFIGGSTVSP------------EFMSLYIALSCYTAAFIAEIVRSGLI 290 H + P L Q F + G ST+ P E + +AL AA+ +E +RSGL Sbjct: 66 HCNVPTLVQLMFWYFGISTLFPLPMLDWLADHHSEAVFSIVALGLCQAAYFSEDLRSGLR 125 Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 A+P GQ EAA ALG + R VL+PQA+R+ +P L + ++L KNSSLA+A+G +L Sbjct: 126 AIPPGQEEAARALGNSFIGTLRYVLMPQAVRNALPALINHSVSLFKNSSLAMAIGVTELT 185 Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 I N + +A E L+ +YL S++I Sbjct: 186 HAVKEIENTSFRAFESYLLATVMYLGFSLVI 216 >gi|319950338|ref|ZP_08024257.1| glutamine ABC transporter membrane protein [Dietzia cinnamea P4] gi|319436030|gb|EFV91231.1| glutamine ABC transporter membrane protein [Dietzia cinnamea P4] Length = 220 Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 46/126 (36%), Positives = 73/126 (57%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I L+ Y AA+I E +RSG+ VP GQ EAA ++GL ++ R V+LPQA R I PL S Sbjct: 95 IMLAVYHAAYICEALRSGVNTVPVGQAEAARSIGLGFGQSLREVILPQAFRGAIAPLGSV 154 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 + L+KNS++A +G D + I G ++ + +++ L++ I L+ L+ Sbjct: 155 IIALIKNSTVAAVIGVGDSAGLLQVITENEGASLPTFFFFAMVFVILTLPIGLWTTSLSR 214 Query: 391 KIALKE 396 K+A+K Sbjct: 215 KLAVKR 220 >gi|308174187|ref|YP_003920892.1| high affinity arginine ABC transporter permease [Bacillus amyloliquefaciens DSM 7] gi|307607051|emb|CBI43422.1| high affinity arginine ABC transporter (permease) [Bacillus amyloliquefaciens DSM 7] Length = 219 Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 59/212 (27%), Positives = 104/212 (49%), Gaps = 29/212 (13%) Query: 191 VFSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244 V VLGIVLSLF + F+ + PL+ + FG+P L L +Q+ Sbjct: 31 VIGLVLGIVLSLFKISTISPLKWIADFYTSIFRGTPLVLQLMIIYFGMPQL----LGFQI 86 Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304 +F + ALS +AA+++EI+R+G+ A+ +GQ EAA+ALG Sbjct: 87 D-------------------QFWAAVTALSLNSAAYVSEIIRAGINAIDKGQKEAAVALG 127 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364 + + K + +LLPQA ++I P + ++ + L K S++ +G D++ T + Sbjct: 128 VPYGKMMKHLLLPQAFKNISPAIINELITLTKESAIVTVIGLGDIMRRAYQSGAATYNYL 187 Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 E +++ FIY L +++A + K+ + Sbjct: 188 EPLIVAGFIYYVLVLILAFIGKGVERKLKAND 219 >gi|170016705|ref|YP_001727624.1| amino acid ABC transporter periplasmic protein [Leuconostoc citreum KM20] gi|169803562|gb|ACA82180.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Leuconostoc citreum KM20] Length = 479 Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 51/176 (28%), Positives = 83/176 (47%), Gaps = 23/176 (13%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 + LPL+ ++ F+ GLP + + + P F + I L Sbjct: 326 RGLPLMVLAFFIYIGLPGVTGVKI-----------------------PAFTAGIITLILN 362 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 A+ VR G AV RGQMEAA +LGL + A R V++PQ +R ++P +Q++ LK Sbjct: 363 EGAYTGAFVRGGFEAVERGQMEAARSLGLNYNSAMRKVIMPQGLRIMVPSFINQFIITLK 422 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 ++S+ A+G +L G I+ + Q + I IYL + ++ N + KI Sbjct: 423 DTSILSAIGLLELTQTGTLIVARNSQGFRVWAIVAVIYLIVITLLTWLSNWVEKKI 478 >gi|49475802|ref|YP_033843.1| amino acid permease [Bartonella henselae str. Houston-1] gi|49238609|emb|CAF27850.1| Amino acid permease [Bartonella henselae str. Houston-1] Length = 250 Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 44/103 (42%), Positives = 65/103 (63%) Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 AL +T+A IAE VRSG+ A+ GQ AA+A+G T + R ++LP+AMR+I+PPLTS+ Sbjct: 120 ALGFFTSARIAEQVRSGIEAISSGQRYAAMAMGFTTYQIYRYIILPRAMRTIMPPLTSEA 179 Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374 + ++KNSS+A AV +L+ I + E LI +Y Sbjct: 180 MGIVKNSSIAFAVSINELMQFQYQTIEEMSHVYENYLIVTILY 222 Score = 40.0 bits (92), Expect = 0.68, Method: Compositional matrix adjust. Identities = 28/79 (35%), Positives = 39/79 (49%), Gaps = 5/79 (6%) Query: 84 SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVA-----WICRVYVEVFRN 138 +Y +L NTF L+ S +I A +G +VG R N + I ++VEV RN Sbjct: 28 TYLDTLLESLKNTFVLSISSLILAIFLGVIVGTMRTLPNTSMTNCSFRTIGYIWVEVMRN 87 Query: 139 IPPLVVIFFLYKSVLSVLP 157 IP LV +F Y V + P Sbjct: 88 IPLLVQVFLWYFVVPKIYP 106 >gi|47097702|ref|ZP_00235210.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Listeria monocytogenes str. 1/2a F6854] gi|47013921|gb|EAL04946.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Listeria monocytogenes str. 1/2a F6854] Length = 136 Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 38/91 (41%), Positives = 67/91 (73%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+S IALS +AA++AEI+R+G+ AV +GQMEAA +LG+T + R ++LPQA+++I+P Sbjct: 6 FVSGCIALSLNSAAYVAEIIRAGISAVNKGQMEAARSLGMTQGASMRYIILPQAVKNILP 65 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356 L ++++ ++K SS+ +G +L+ + G + Sbjct: 66 ALGNEFVTVIKESSIVSVIGVTELMFMTGVV 96 >gi|325525581|gb|EGD03370.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. TJI49] Length = 500 Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 59/188 (31%), Positives = 99/188 (52%), Gaps = 10/188 (5%) Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247 K+ V +++LG++L F L+R H K + +YI F LP LVL+ Y L Sbjct: 26 KLSVSAWLLGVLLG-FPVALARQSHHAALKRVAAVYIWFFR--SLPLLVLLVFIYNL--- 79 Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307 Q + +S F + IA+ A+ AEI R G+++VPRGQ+EA ALG+ Sbjct: 80 ----PQVFPATSAVLSDPFTAGLIAMVLSETAYFAEIHRGGILSVPRGQLEAGRALGIRF 135 Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367 R++++PQA+R +P L ++++ ++K +SL + A+++ VG + Q E + Sbjct: 136 TGIQRMIVMPQAIRIALPALANEFITIVKLTSLVSVISLAEILLVGQRLYTQNFLVFETM 195 Query: 368 LIWMFIYL 375 L F Y+ Sbjct: 196 LAVAFYYV 203 >gi|327193818|gb|EGE60695.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium etli CNPAF512] Length = 252 Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 51/157 (32%), Positives = 90/157 (57%), Gaps = 11/157 (7%) Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290 G+P L+LI Y F P+L G+ V P F+++ L Y +AF++E+VR+G++ Sbjct: 74 GVPLLMLILWSY---FLVPLLT------GADV-PSFVTMLTTLVVYQSAFLSEVVRAGIV 123 Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 A+ GQM+AA ALG ++ A R ++LPQA+ ++IP + S +++ +K+++L + DL Sbjct: 124 ALGPGQMDAARALGHSYMGAMRYIILPQALYNMIPSILSTFVSTIKDTTLGYVINVPDLT 183 Query: 351 SVGGTIINQ-TGQAIEIILIWMFIYLSLSIMIALFMN 386 + NQ Q ++ LI +Y ++ + F N Sbjct: 184 FAASQVNNQLLTQPFQVFLILAIVYFAICWTLTYFAN 220 >gi|46908518|ref|YP_014907.1| amino acid ABC transporter, permease protein [Listeria monocytogenes str. 4b F2365] gi|47092446|ref|ZP_00230236.1| amino acid ABC transporter, permease protein [Listeria monocytogenes str. 4b H7858] gi|254825077|ref|ZP_05230078.1| amino acid ABC transporter [Listeria monocytogenes FSL J1-194] gi|254994370|ref|ZP_05276560.1| amino acid ABC transporter, permease protein [Listeria monocytogenes FSL J2-064] gi|300763904|ref|ZP_07073900.1| amino acid ABC transporter, permease protein [Listeria monocytogenes FSL N1-017] gi|46881790|gb|AAT05084.1| amino acid ABC transporter, permease protein [Listeria monocytogenes serotype 4b str. F2365] gi|47019223|gb|EAL09966.1| amino acid ABC transporter, permease protein [Listeria monocytogenes str. 4b H7858] gi|293594320|gb|EFG02081.1| amino acid ABC transporter [Listeria monocytogenes FSL J1-194] gi|300515245|gb|EFK42296.1| amino acid ABC transporter, permease protein [Listeria monocytogenes FSL N1-017] gi|328465383|gb|EGF36630.1| amino acid ABC transporter, permease protein [Listeria monocytogenes 1816] gi|328471567|gb|EGF42447.1| amino acid ABC transporter, permease protein [Listeria monocytogenes 220] Length = 238 Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 67/211 (31%), Positives = 109/211 (51%), Gaps = 24/211 (11%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 +F F+LG++LSL R + L +YIS F G P +V + + + + P Sbjct: 33 IFGFILGVLLSL-----PRIYKIPVLDQLARVYISFFR--GTPIMVQL---FIVFYGIPA 82 Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCY---TAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307 L I S + P LY A++ Y +AA IAE++R+G+ +V GQ EAA ++GL+ Sbjct: 83 LSSIVGIDLSQMDP----LYAAIATYALSSAATIAEVIRAGVNSVDAGQAEAAYSIGLSS 138 Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367 R+ ++LPQA+ +P + + LK++SLA ++G D+ G T+I + A+E Sbjct: 139 RQTFLRIILPQALYQALPNFGNLVIGYLKDTSLAFSIGVMDMSGRGQTLITLSNHALE-- 196 Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 +Y+SLSI+ L L EK+ Sbjct: 197 -----VYISLSIIYYLTAVLLEYSFKWIEKR 222 >gi|319950980|ref|ZP_08024851.1| putative ABC transporter permease [Dietzia cinnamea P4] gi|319435362|gb|EFV90611.1| putative ABC transporter permease [Dietzia cinnamea P4] Length = 327 Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 46/130 (35%), Positives = 80/130 (61%), Gaps = 4/130 (3%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + L+ AA++AEIVR+G+ +VP GQ EA+ ALG+T + R +LPQAMR IIPP ++ Sbjct: 165 VGLAMNEAAYMAEIVRAGISSVPEGQAEASTALGMTWGQTMRRTILPQAMRVIIPPTGNE 224 Query: 331 YLNLLKNSSLAVAVGFA-DLVSVGGTIINQTGQAIEIILI---WMFIYLSLSIMIALFMN 386 ++++LK +SL VA+ F+ +L I Q I ++L+ W + S+ ++ F+ Sbjct: 225 FISMLKTTSLVVAIPFSGELYGQARDISGVNFQPIPLLLVAATWYLVITSVLMVGQHFLE 284 Query: 387 RLNAKIALKE 396 + ++ A ++ Sbjct: 285 KRFSRGATRQ 294 >gi|326776168|ref|ZP_08235433.1| polar amino acid ABC transporter, inner membrane subunit [Streptomyces cf. griseus XylebKG-1] gi|326656501|gb|EGE41347.1| polar amino acid ABC transporter, inner membrane subunit [Streptomyces cf. griseus XylebKG-1] Length = 215 Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 47/127 (37%), Positives = 78/127 (61%), Gaps = 2/127 (1%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +AL YT++F+ E VRSG+ VP GQ EAA ++G+T + ++V+LPQA R++IPPL+S Sbjct: 90 LALGFYTSSFVCEAVRSGINTVPLGQAEAARSIGMTFAQTLQIVVLPQATRTVIPPLSSI 149 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI-YLSLSIMIALFMNRLN 389 ++ L KNS++A A A+L +++ G I + IW+ I YL ++ I+ L Sbjct: 150 FIALTKNSAIAGAFSVAELFG-WQKLMSDKGYDIVPVFIWVAIGYLVVTFTISGLFRLLE 208 Query: 390 AKIALKE 396 ++ + Sbjct: 209 RRMEVAR 215 >gi|238920805|ref|YP_002934320.1| glutamate-aspartate transport system permease [Edwardsiella ictaluri 93-146] gi|238870374|gb|ACR70085.1| glutamate-aspartate transport system permease [Edwardsiella ictaluri 93-146] Length = 225 Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 70/207 (33%), Positives = 114/207 (55%), Gaps = 12/207 (5%) Query: 188 KIFVFSFVLGIVLS--LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH 245 KI + + V+GI+ L RLSR K L LY++ F +P LV++ L + L Sbjct: 25 KITLTAVVVGILWGTLLAVMRLSRW---KPLAWLAALYVNLFR--SVP-LVMVLLWFYLV 78 Query: 246 FDKPVLGQFNFIGGSTVSP-EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304 P L Q F+G S S +S +A + + AA+ +EI+R+G+ +V RGQ AA+ALG Sbjct: 79 V--PSLLQ-RFLGLSPQSDIRLISAMVAFALFEAAYYSEIIRAGIKSVARGQNAAALALG 135 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364 +T ++ LV+LPQA R+++P L +Q + L +++SL + AD TI + G + Sbjct: 136 MTPWQSMYLVILPQAFRAMVPLLLTQGIVLFQDTSLVYVLSLADFFRTASTIGERDGTQL 195 Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAK 391 E+IL +Y +S+ +L + L + Sbjct: 196 EMILFAGAVYFIISLSASLLVGHLKKR 222 Score = 41.6 bits (96), Expect = 0.24, Method: Compositional matrix adjust. Identities = 23/68 (33%), Positives = 41/68 (60%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G V T + + ++ + GTL+ RLS K +AW+ +YV +FR++P ++V+ + Sbjct: 16 LLDGLVITLKITLTAVVVGILWGTLLAVMRLSRWKPLAWLAALYVNLFRSVPLVMVLLWF 75 Query: 149 YKSVLSVL 156 Y V S+L Sbjct: 76 YLVVPSLL 83 >gi|257057820|ref|YP_003135652.1| amino acid ABC transporter membrane protein [Saccharomonospora viridis DSM 43017] gi|256587692|gb|ACU98825.1| amino acid ABC transporter membrane protein [Saccharomonospora viridis DSM 43017] Length = 269 Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 72/214 (33%), Positives = 111/214 (51%), Gaps = 24/214 (11%) Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL-VLIALKYQLHFDK 248 F V+G+VL+L + + L LYI F G+P L V IAL Y + Sbjct: 69 FGLGLVIGMVLALMKLSSVGPY-----RWLATLYIEFFR--GIPALLVFIALGYGV---- 117 Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308 P+ F ST + IAL +A+IAE +R+G+ AVP+GQ+EAA +LG++ Sbjct: 118 PLAFGIRFDIYSTAA-------IALGLVGSAYIAETLRAGIQAVPKGQVEAARSLGMSQA 170 Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA----DLVSVGGTIINQTGQAI 364 + T V++PQA R I+PPLT++ + L K+SSL +G A +L G +N TG Sbjct: 171 RTTVTVVIPQAFRIILPPLTNELILLTKDSSLIYLLGLAREEYELAKFGREGLNATGSLT 230 Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 I+L + YL +++ + L + KE++ Sbjct: 231 PILLAGV-CYLIITVPLGYLSRYLERRSGRKEER 263 >gi|254473626|ref|ZP_05087022.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Pseudovibrio sp. JE062] gi|211957338|gb|EEA92542.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Pseudovibrio sp. JE062] Length = 274 Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 43/122 (35%), Positives = 73/122 (59%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IALS +AFIAEI R+G+ +V GQ+EA ALGL+ R ++ PQA ++I+PPL + Sbjct: 145 IALSLGYSAFIAEIFRAGIESVDEGQLEAGRALGLSRWHTFRFIIWPQAFKNILPPLGND 204 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++ L+K S+L +G D+ +G T Q E + ++YL +++ ++L + L Sbjct: 205 FIALIKESALVSVLGVQDITQLGKIYSASTFQFFETYNVVAYLYLIMTVSLSLVVRGLER 264 Query: 391 KI 392 ++ Sbjct: 265 RM 266 Score = 36.2 bits (82), Expect = 8.4, Method: Compositional matrix adjust. Identities = 15/53 (28%), Positives = 30/53 (56%) Query: 96 TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 T ++ F A+ G + GR S ++++ +C Y E+ R +P LV++F++ Sbjct: 52 TLFVTFVSFFIASFFGLFIAIGRGSKHRIIREMCSFYTEIMRGVPMLVLLFYI 104 >gi|167842072|ref|ZP_02468756.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia thailandensis MSMB43] Length = 297 Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 66/228 (28%), Positives = 117/228 (51%), Gaps = 16/228 (7%) Query: 168 GMFLNNRGLSFPTLTMDTNAKIF-VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226 G FL R + LT N + V + LGIVL + T + R A+ YI Sbjct: 66 GQFLTARSI----LTGLGNTIVMTVLAMTLGIVLGVV-TAVMRLSSNPVLGAIAQGYI-- 118 Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLG-----QFNFIGGSTVSPEFMSLYIALSCYTAAFI 281 +L G P ++ + L + L P LG +F + V F++ + L A+ Sbjct: 119 WLFRGTPVILQLLLWFNLALVFPTLGIPGIAEFRTV---DVMTPFLAAVLGLGINQGAYT 175 Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341 +E+VR+GL++V GQ EAA ++G+ +A R ++LPQAMR I+PP+ ++ + ++K +SLA Sbjct: 176 SEVVRAGLLSVDTGQYEAAKSIGMARLQALRRIILPQAMRMIVPPIGNELIGMVKLTSLA 235 Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 V +A+++ I + IE++++ YL++ +++ R+ Sbjct: 236 SVVQYAEMLHNAQNIYYANARVIELLIVAGIWYLAVVTVLSFAQARVE 283 >gi|148980392|ref|ZP_01816035.1| ABC-type amino acid transport system, permease component [Vibrionales bacterium SWAT-3] gi|145961264|gb|EDK26576.1| ABC-type amino acid transport system, permease component [Vibrionales bacterium SWAT-3] Length = 366 Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 38/95 (40%), Positives = 65/95 (68%), Gaps = 1/95 (1%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 GS F +L + + ++AA++AE++R GL A+P+GQ EAA ALGLT+ K L++LPQ Sbjct: 225 GSETDKLFRAL-VGVVLFSAAYMAEVIRGGLQAIPKGQYEAADALGLTYWKKMGLIILPQ 283 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353 A++ IP + + ++ L K++SL + +G D++ +G Sbjct: 284 ALKITIPSIVNTFIGLFKDTSLVLIIGMFDVLGIG 318 >gi|150019589|ref|YP_001311843.1| polar amino acid ABC transporter, inner membrane subunit [Clostridium beijerinckii NCIMB 8052] gi|149906054|gb|ABR36887.1| polar amino acid ABC transporter, inner membrane subunit [Clostridium beijerinckii NCIMB 8052] Length = 219 Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 59/190 (31%), Positives = 101/190 (53%), Gaps = 19/190 (10%) Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF---LIFGLPTLVLIALKYQLHFDK 248 F+ + G +L L T L R K P+ YI+ + G P LV I Y ++ Sbjct: 26 FAVLCGTILGLALTLLRRS------KFKPISYIAAAYVEFVRGTPLLVQI---YIIYIGL 76 Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308 P L + P+ IAL+ +AA+I+EI+R+G+ AV +GQMEAA +LG+ Sbjct: 77 PKLIGIDM-------PDMTVGSIALALNSAAYISEIIRAGIEAVDKGQMEAARSLGMNQG 129 Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368 A V++PQA ++I+P L +++++++K SS+ +G A+L+ + T +E I+ Sbjct: 130 LAMVHVIIPQAFKNILPALGNEFISVIKESSMVSVIGVAELMYNASIVRGNTALGLEPII 189 Query: 369 IWMFIYLSLS 378 + +Y L+ Sbjct: 190 VAAVVYFVLT 199 >gi|306831123|ref|ZP_07464284.1| amino acid ABC superfamily ATP binding cassette transporter [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|304426689|gb|EFM29800.1| amino acid ABC superfamily ATP binding cassette transporter [Streptococcus gallolyticus subsp. gallolyticus TX20005] Length = 522 Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 62/171 (36%), Positives = 93/171 (54%), Gaps = 14/171 (8%) Query: 191 VFSFVLGIVLSLF--ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248 V S +L +VL F A R+S + L LYI ++ GLP LV+++L + Sbjct: 30 VVSMILALVLGGFVTAARMSDNL---LISGLTKLYIE--VVRGLPMLVILSL---FFYGL 81 Query: 249 PVLGQFNFIGGSTVSPEF---MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305 P LG FN GS + +S I L+ + F+AEI RSG+ AV GQ E A ++G Sbjct: 82 PELG-FNVPDGSLFGVDLDRLISALIGLTVGESVFVAEIYRSGIQAVDSGQFEGARSIGF 140 Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356 + R V++PQA ++I+P L +++ N +K+SS A +G ADL+ TI Sbjct: 141 NKFQTYRYVIIPQAFKNILPTLGNEFANNIKSSSQASVIGVADLMFTASTI 191 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 31/91 (34%), Positives = 52/91 (57%), Gaps = 4/91 (4%) Query: 83 SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142 +Y + IL G + T +L+ MI A ++G V A R+S N L++ + ++Y+EV R +P L Sbjct: 12 QNYGSFILDGALMTVFLSVVSMILALVLGGFVTAARMSDNLLISGLTKLYIEVVRGLPML 71 Query: 143 VVI-FFLYKSVLSVLPIPDHSIVLPFGMFLN 172 V++ F Y +PD S+ FG+ L+ Sbjct: 72 VILSLFFYGLPELGFNVPDGSL---FGVDLD 99 >gi|206577706|ref|YP_002238970.1| amino acid ABC transporter, permease protein [Klebsiella pneumoniae 342] gi|290512972|ref|ZP_06552336.1| octopine/nopaline transport system permease [Klebsiella sp. 1_1_55] gi|206566764|gb|ACI08540.1| amino acid ABC transporter, permease protein [Klebsiella pneumoniae 342] gi|289774585|gb|EFD82589.1| octopine/nopaline transport system permease [Klebsiella sp. 1_1_55] Length = 243 Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 72/212 (33%), Positives = 112/212 (52%), Gaps = 23/212 (10%) Query: 189 IFVFSFVLG--IVLSLFATRLSRHFHEKTGKALPLLYISTFLIF-GLPTLVLIALKYQLH 245 +F+ SF+LG + L + A R+S H+ +G A LIF G P L+ + L Y Sbjct: 25 LFICSFILGGALALGVLALRMS-HWPLASGFA-----KGYILIFRGSPLLIQLFLIYY-- 76 Query: 246 FDKPVLGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301 LGQF I S + P F+ +AL+ TAA+ AEI+R GL+A+P GQ+EA Sbjct: 77 ----GLGQFGVIRHSFLWPLLREPFICAVLALALCTAAYTAEILRGGLLAIPPGQIEAGQ 132 Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361 A G++ R ++ P +R +P +++ + L+K+++LA V D+ V II +T Sbjct: 133 ACGMSRWLLLRRIIAPVMLRYALPAYSTEAILLVKSTALASLVTVWDVTGVAQQIIQRTY 192 Query: 362 QAIEIILIWMFIYLSLSIMI----ALFMNRLN 389 + +E+ L IYL L+ +I AL RL Sbjct: 193 RTMEVFLCAAAIYLLLNFIIVQLYALLERRLT 224 >gi|120602869|ref|YP_967269.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio vulgaris DP4] gi|120563098|gb|ABM28842.1| amino acid ABC transporter membrane protein, PAAT family [Desulfovibrio vulgaris DP4] gi|311233446|gb|ADP86300.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio vulgaris RCH1] Length = 262 Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 55/178 (30%), Positives = 97/178 (54%), Gaps = 15/178 (8%) Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247 ++ VFS + I + L T L R + + Y+ ++ G+P LV QL + Sbjct: 67 QVTVFSIICSIPIGLI-TGLGRLSRNRGINLVASTYVE--VVRGIPLLV------QLFYI 117 Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307 LG+F + P+ ++ IALS A++ E+ R+G+ A+P+GQ EAA +LG Sbjct: 118 YYALGRFLKV------PDMLAAIIALSVCYGAYMGEVFRAGIEAIPKGQTEAARSLGFNR 171 Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365 + LV+LPQA R+I+PP+ ++++ +LK++SL + AD++ G +++ Q E Sbjct: 172 VETMFLVVLPQAWRTILPPVGNEFIAMLKDTSLVSIIAVADILRRGREFASESFQYFE 229 Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust. Identities = 26/69 (37%), Positives = 40/69 (57%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151 G + TF + +I + IG + G GRLS N+ + + YVEV R IP LV +F++Y + Sbjct: 61 GILVTFQVTVFSIICSIPIGLITGLGRLSRNRGINLVASTYVEVVRGIPLLVQLFYIYYA 120 Query: 152 VLSVLPIPD 160 + L +PD Sbjct: 121 LGRFLKVPD 129 >gi|300716002|ref|YP_003740805.1| Polar amino acid ABC transporter, inner membrane subunit [Erwinia billingiae Eb661] gi|299061838|emb|CAX58954.1| Polar amino acid ABC transporter, inner membrane subunit [Erwinia billingiae Eb661] Length = 247 Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 67/199 (33%), Positives = 105/199 (52%), Gaps = 17/199 (8%) Query: 189 IFVFSFVLGIVLSL--FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246 +F SFVLG +L+L A R+SR+ LYI F G P ++ + L Y Sbjct: 24 LFFASFVLGGLLALVILAMRMSRN---PLLSGFARLYILVFR--GSPLMIQLFLIYY--- 75 Query: 247 DKPVLGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302 LGQF I S V P F +AL+ TA++ AEI R GL+A+P GQ+EA +A Sbjct: 76 ---GLGQFEVIRHSFVWPVLREPFFCAVVALALCTASYTAEIFRGGLLAIPSGQIEAGMA 132 Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362 G++ R ++ P +R +P +++ + L+K+++LA V D+ V II +T + Sbjct: 133 CGMSRWLLLRRIIAPIMLRYALPAYSTEAILLVKSTALASLVTVWDVTGVAQQIIQRTYR 192 Query: 363 AIEIILIWMFIYLSLSIMI 381 +E+ + IYL L+ +I Sbjct: 193 TMEVFVCAALIYLILNFII 211 >gi|118473444|ref|YP_889564.1| glutamine ABC transporter permease/substrate-binding protein [Mycobacterium smegmatis str. MC2 155] gi|118174731|gb|ABK75627.1| glutamine ABC transporter, permease/substrate-binding protein [Mycobacterium smegmatis str. MC2 155] Length = 468 Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 60/208 (28%), Positives = 103/208 (49%), Gaps = 33/208 (15%) Query: 193 SFVLGIVLSLFATRLSRHF--------HEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244 + VLG++ L R+SR + + PLL + F+ FG+P+ AL +Q+ Sbjct: 284 ALVLGVIFGLL--RVSRSVVLRAIGTTYVDIFRGTPLLVQAFFIYFGIPS----ALGFQM 337 Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304 + I LS A++ EIVR G+ +V +GQMEAA +LG Sbjct: 338 S-------------------ALTAGIITLSLNAGAYMTEIVRGGIQSVDKGQMEAARSLG 378 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364 + + R V+LPQA+R++IP +Q++ LK++S+ +G A+L G II + Q+ Sbjct: 379 IGYLPTMRKVILPQAIRTMIPSYINQFVITLKDTSILSVIGIAELTQTGRIIIARNFQSF 438 Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKI 392 + LI IY + + + +R+ ++ Sbjct: 439 TMWLIIGIIYFVVIMALTKLSDRVEKRL 466 >gi|71083758|ref|YP_266478.1| ABC transporter permease component [Candidatus Pelagibacter ubique HTCC1062] gi|71062871|gb|AAZ21874.1| ABC transporter permease component [Candidatus Pelagibacter ubique HTCC1062] Length = 226 Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 52/150 (34%), Positives = 83/150 (55%), Gaps = 23/150 (15%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 +A+PLL + ++ +GLP + G + SP F+S IAL+ Sbjct: 68 RAIPLLVLILWIYYGLPIMT----------------------GLSFSP-FVSGIIALAIS 104 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 +AF AEI R+G+ ++ + Q EA +LGLT K RLV+LPQA+++I+P L +Q++ +LK Sbjct: 105 ESAFQAEIFRAGINSIKKSQWEAGSSLGLTFYKRLRLVILPQAIKNILPALGNQFVYVLK 164 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 SSL +G DL ++ T + +EI Sbjct: 165 MSSLVSIIGIGDLTRKANELVVSTYRPLEI 194 >gi|332161362|ref|YP_004297939.1| putative amino-acid ABC transporter [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|325665592|gb|ADZ42236.1| putative amino-acid ABC transporter [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|330859509|emb|CBX69852.1| inner membrane amino-acid ABC transporter permease protein yecS [Yersinia enterocolitica W22703] Length = 220 Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 61/207 (29%), Positives = 109/207 (52%), Gaps = 18/207 (8%) Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251 F LG +L++ RLSR LPL +S F + LIA + +++ P Sbjct: 32 FGLALGFMLAMM--RLSRF--------LPLSLLSRFYVSIFRGTPLIAQLFMIYYGLP-- 79 Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311 QF G + P +L I LS TAA+ +E +R+ + ++ +GQ EAA ++G+T + Sbjct: 80 -QF----GIELDPMPAAL-IGLSLNTAAYTSETLRAAISSIEKGQWEAAASIGMTRWQTL 133 Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371 V+LPQA RS +PPL + ++ L+K++SLA + +L + ++T + + L Sbjct: 134 YRVILPQAGRSALPPLGNSFIGLVKDTSLAATIQVPELFRQAQLVTSRTLEVFTMYLAAS 193 Query: 372 FIYLSLSIMIALFMNRLNAKIALKEKK 398 IY ++ +++ NRL A + ++++ Sbjct: 194 LIYWIMATLLSALQNRLEAHVNRQDQE 220 >gi|300717206|ref|YP_003742009.1| L-cystine ABC transporter, permease protein [Erwinia billingiae Eb661] gi|299063042|emb|CAX60162.1| L-cystine ABC transporter, permease protein [Erwinia billingiae Eb661] Length = 222 Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 62/207 (29%), Positives = 113/207 (54%), Gaps = 18/207 (8%) Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251 F +LG +L++ RLS HF + L Y+S F G P LIA + +++ P Sbjct: 32 FGLLLGFILAMM--RLS-HFWPISW--LSRCYVSIFR--GTP---LIAQLFMIYYGLP-- 79 Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311 QF G + P S I LS TAA+ +E +R + ++ RGQ EAA ++G+T + Sbjct: 80 -QF----GIELDP-IPSAMIGLSLNTAAYASESLRGAIASIERGQWEAASSIGMTRWQTM 133 Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371 R V+LPQA R+ +PPL + +++L+K++SLA + +L I ++T + + L Sbjct: 134 RRVILPQAARTALPPLGNSFISLVKDTSLAATIQVPELFRQAQLITSRTLEVFTMYLAAS 193 Query: 372 FIYLSLSIMIALFMNRLNAKIALKEKK 398 IY ++ ++++ ++L ++ ++++ Sbjct: 194 LIYWVMATVLSILQSKLEDRVNRQDRE 220 Score = 39.3 bits (90), Expect = 0.97, Method: Compositional matrix adjust. Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 8/89 (8%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G V T L+ GM ++G ++ RLS ++W+ R YV +FR P + +F + Sbjct: 15 LLKGAVFTLQLSIGGMFFGLLLGFILAMMRLSHFWPISWLSRCYVSIFRGTPLIAQLFMI 74 Query: 149 YKSV----LSVLPIPDHSIVLPFGMFLNN 173 Y + + + PIP I G+ LN Sbjct: 75 YYGLPQFGIELDPIPSAMI----GLSLNT 99 >gi|261343547|ref|ZP_05971192.1| glutamate/aspartate ABC transporter, permease protein [Providencia rustigianii DSM 4541] gi|282568696|gb|EFB74231.1| glutamate/aspartate ABC transporter, permease protein [Providencia rustigianii DSM 4541] Length = 226 Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 40/127 (31%), Positives = 73/127 (57%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 +S +A + AA+ +EI+R+G+ ++ RGQ A++ALG+T + RL++LPQA ++++ Sbjct: 97 RLISAVVAFCLFEAAYYSEIIRAGIQSISRGQANASLALGMTQMQTMRLIVLPQAFKAMV 156 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 P L +Q + L +++SL +G D I + G +E+IL IY S ++ Sbjct: 157 PLLLTQGIVLFQDTSLVYVLGLTDFFRTATNIGERDGTQVEMILFAGLIYFIFSFGASML 216 Query: 385 MNRLNAK 391 +N L + Sbjct: 217 VNYLKKR 223 Score = 38.5 bits (88), Expect = 2.0, Method: Compositional matrix adjust. Identities = 19/58 (32%), Positives = 34/58 (58%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 GF+ T + + ++ + GT + RLS KL+ W YV +FR++P ++V+F+ Y Sbjct: 20 GFIITAKITAAAIVVGIVWGTALAMMRLSNIKLLRWFAAFYVNMFRSVPLVMVLFWFY 77 >gi|108799121|ref|YP_639318.1| amino acid ABC transporter permease [Mycobacterium sp. MCS] gi|119868236|ref|YP_938188.1| polar amino acid ABC transporter, inner membrane subunit [Mycobacterium sp. KMS] gi|108769540|gb|ABG08262.1| amino acid ABC transporter membrane protein 1, PAAT family [Mycobacterium sp. MCS] gi|119694325|gb|ABL91398.1| amino acid ABC transporter membrane protein 1, PAAT family [Mycobacterium sp. KMS] Length = 226 Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 46/126 (36%), Positives = 76/126 (60%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + L+ YTA+F+ E VRSG+ VP GQ EAA +LGLT + R++LLPQA RS++ PL S Sbjct: 101 LGLTVYTASFVCETVRSGVNTVPLGQAEAARSLGLTFSQNLRMILLPQAFRSVVIPLGSV 160 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 + L KN+++A A+G A+ + +I T + + I+ ++ L++ + L L Sbjct: 161 LIALTKNTTIASAIGVAEAALLMKEMIENTAALLVVGSIFALGFIILTLPLGLVFGWLGK 220 Query: 391 KIALKE 396 ++A+ Sbjct: 221 RLAVAR 226 Score = 38.1 bits (87), Expect = 2.4, Method: Compositional matrix adjust. Identities = 21/65 (32%), Positives = 32/65 (49%) Query: 83 SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142 + Y I F T L + A I+GT++ RLS +++W+ YV V RN P Sbjct: 5 TEYRAQIFEAFWTTIQLTVYSAVGALILGTVLAGMRLSPVPMLSWLGTAYVNVIRNTPLT 64 Query: 143 VVIFF 147 ++I F Sbjct: 65 LIILF 69 >gi|329666485|gb|AEB92433.1| ABC transporter permease component [Lactobacillus johnsonii DPC 6026] Length = 537 Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 42/120 (35%), Positives = 75/120 (62%) Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 +S T A++AE++R G+ A P+GQ EAA ALG+TH + ++LPQA+R+ +P +T++++ Sbjct: 391 VSINTGAYLAEVIRGGINATPKGQFEAASALGMTHSQQMWHIILPQAIRNSLPSITNEFI 450 Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 +K++S+ + ++L VG T+ +QT + + I IYL L+ I N + K+ Sbjct: 451 VNIKDTSVLSIISVSELFFVGTTVASQTFEFFQTYFIISMIYLILTFSITRIFNFIEKKL 510 Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust. Identities = 27/75 (36%), Positives = 34/75 (45%), Gaps = 10/75 (13%) Query: 85 YATAILVGFVNTFWLAFSGMIPATIIGTLVG----------AGRLSANKLVAWICRVYVE 134 Y + IL G T LA G I IG LVG G+ K+V W+ VY+E Sbjct: 296 YGSMILGGVGMTLLLALVGTIAGFFIGLLVGIVRTIPTPKSTGKRWGLKIVNWLLAVYIE 355 Query: 135 VFRNIPPLVVIFFLY 149 VFR P +V +Y Sbjct: 356 VFRGTPMMVQAAVIY 370 >gi|319796472|ref|YP_004158112.1| polar amino acid ABC transporter, inner membrane subunit [Variovorax paradoxus EPS] gi|315598935|gb|ADU40001.1| polar amino acid ABC transporter, inner membrane subunit [Variovorax paradoxus EPS] Length = 256 Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 40/127 (31%), Positives = 76/127 (59%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +AL+ +AA+I+E+ R+G+ ++ RGQ +A ++G + + R V+LPQA R ++PPL + Sbjct: 129 VALTLNSAAYISEVFRAGIQSISRGQFDAGRSIGFSPAQVMRYVVLPQAFRRMLPPLGNN 188 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 + LLK++SL A+G A+L T+ + E L IY +++++ + RL Sbjct: 189 AIALLKDTSLVSAIGLAELAYAARTVAGAYARYWEPYLAISVIYWVMTLVLTTMLRRLEH 248 Query: 391 KIALKEK 397 ++A ++ Sbjct: 249 RLARSDR 255 >gi|282897628|ref|ZP_06305628.1| Amino acid ABC transporter, permease protein, 3- TM region protein, His/Glu/Gln/Arg/opine [Raphidiopsis brookii D9] gi|281197551|gb|EFA72447.1| Amino acid ABC transporter, permease protein, 3- TM region protein, His/Glu/Gln/Arg/opine [Raphidiopsis brookii D9] Length = 343 Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 63/192 (32%), Positives = 101/192 (52%), Gaps = 23/192 (11%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 V SF LG++L+L R+ + +LYI L+ GLP LI + + P+ Sbjct: 156 VLSFPLGVLLAL-----GRNSELPVIRWFSILYIE--LVRGLP---LIGILFIAQVMLPL 205 Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 F+ + + L ++AA++AE VR GL ++PRGQ EAA ALGL Sbjct: 206 -----FLPDNWRLDRLVRGVAGLVLFSAAYMAENVRGGLQSIPRGQFEAARALGLNTFLL 260 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT---GQAIEI- 366 LV+LPQA+R++IP + Q++ L K++SL VG +L + +I+ Q G+ +E+ Sbjct: 261 LILVILPQALRAVIPTIVGQFIGLFKDTSLLSLVGLVELTGIARSILAQPQFLGRYMEVY 320 Query: 367 ----ILIWMFIY 374 ++ W+F Y Sbjct: 321 IFIGVIYWVFCY 332 >gi|329906187|ref|ZP_08274378.1| Glutamate Aspartate transport system permease protein gltK [Oxalobacteraceae bacterium IMCC9480] gi|327547320|gb|EGF32156.1| Glutamate Aspartate transport system permease protein gltK [Oxalobacteraceae bacterium IMCC9480] Length = 230 Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 60/228 (26%), Positives = 111/228 (48%), Gaps = 12/228 (5%) Query: 178 FPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP---- 233 F + + +V+ F G+V +L T ++ G L ++ +S + LP Sbjct: 2 FANFDFNVIERSWVYLFQTGMVFTLKLTAMAMAGGIVLGTLLAMMRLSKYKALSLPATTY 61 Query: 234 -----TLVLIALKYQLHFDKPVLGQFNFIGGST--VSPEFMSLYIALSCYTAAFIAEIVR 286 ++ LI + + +F P +G + IG T F S I + AA+ EI+R Sbjct: 62 VNLIRSMPLILVIFWFYFLVPYIGAW-LIGSPTPIQVGAFSSSLITFILFEAAYYCEIMR 120 Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346 +G+ ++PRGQ+ A ALG+ + + ++LPQA R++IP L +Q + L ++ SL + Sbjct: 121 AGIQSIPRGQVSAGRALGMNYWQTMSNIVLPQAFRNMIPLLLTQTIVLFQDVSLVYVLSI 180 Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394 D V I + G+ IE+ L +Y + ++L + +L ++A+ Sbjct: 181 TDFVGAASKIAQRDGRLIEMYLFVAVVYFVMCFGLSLLVKQLQKRVAI 228 >gi|257898670|ref|ZP_05678323.1| amino acid ABC transporter [Enterococcus faecium Com15] gi|293572583|ref|ZP_06683557.1| polar amino acid ABC transporter, inner membrane subunit [Enterococcus faecium E980] gi|257836582|gb|EEV61656.1| amino acid ABC transporter [Enterococcus faecium Com15] gi|291607366|gb|EFF36714.1| polar amino acid ABC transporter, inner membrane subunit [Enterococcus faecium E980] Length = 218 Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 56/176 (31%), Positives = 90/176 (51%), Gaps = 25/176 (14%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 + LPLL I F F LP + + Q N F S AL+ + Sbjct: 63 RNLPLLLIIFFTYFALPQIGI---------------QMNI---------FWSAVAALTIF 98 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 +A ++EI R+GL AVP+GQMEA ++ GLT+ + R ++LPQA +S+IP + SQ ++L+K Sbjct: 99 ESAMLSEIFRAGLNAVPKGQMEAGLSTGLTYVETMRTIVLPQAFKSMIPAIVSQLISLIK 158 Query: 337 NSSLAVAVGFADLVSVGGTIINQ-TGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 ++SLAV + +L I Q T + + +I +Y + ++L L + Sbjct: 159 DTSLAVIISLPELSHQARIIYGQNTNYVLPMFIIMTLMYFVVCYALSLLSGYLEKR 214 >gi|170698798|ref|ZP_02889861.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria IOP40-10] gi|170136276|gb|EDT04541.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria IOP40-10] Length = 297 Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 66/225 (29%), Positives = 115/225 (51%), Gaps = 10/225 (4%) Query: 168 GMFLNNRGLSFPTLTMDTNAKIF-VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226 G FL R + LT N + V + LG+VL + T + R A+ YI Sbjct: 66 GQFLTARSI----LTGLGNTIVMTVLAMTLGVVLGVV-TAVMRLSSNPVLGAIAQGYI-- 118 Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVS--PEFMSLYIALSCYTAAFIAEI 284 +L G P ++ + L + L P LG TV F++ + L A+ +E+ Sbjct: 119 WLFRGTPVILQLLLWFNLALVFPTLGIPGIAEYRTVDVMTPFLAAVLGLGINQGAYTSEV 178 Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344 VR+GL++V GQ EAA ++G+ +A R ++LPQAMR I+PP+ ++ + ++K +SLA V Sbjct: 179 VRAGLLSVDTGQYEAAKSIGMARLQALRRIILPQAMRVIVPPIGNELIGMVKLTSLASVV 238 Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 +A+++ I + IE++++ YL + +++L R+ Sbjct: 239 QYAEMLHNAQNIYYANARVIELLIVAGIWYLVVVTVLSLAQARVE 283 >gi|86144266|ref|ZP_01062598.1| amino acid ABC transporter, permease protein [Vibrio sp. MED222] gi|85837165|gb|EAQ55277.1| amino acid ABC transporter, permease protein [Vibrio sp. MED222] Length = 293 Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 40/112 (35%), Positives = 69/112 (61%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I + ++A+IAE++R+GL +P+GQ EAA +LGL+ R V+ PQ + +I PPL Q Sbjct: 165 ICIGLLSSAYIAEVIRAGLEGIPKGQWEAADSLGLSALSKYRFVVGPQVLTAITPPLAGQ 224 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382 ++L+K++S+ + ++ VG + N +G EI LI F+Y +L ++ Sbjct: 225 AISLIKDTSIVSLISIQEMTFVGTEMANSSGLIFEIWLIVGFVYFALCFALS 276 >gi|329943910|ref|ZP_08292179.1| ABC transporter, permease protein [Actinomyces sp. oral taxon 170 str. F0386] gi|328531343|gb|EGF58185.1| ABC transporter, permease protein [Actinomyces sp. oral taxon 170 str. F0386] Length = 321 Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 56/159 (35%), Positives = 89/159 (55%), Gaps = 4/159 (2%) Query: 237 LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296 L AL QL P + +TV F++ + L A+++EIVRSGL +V +GQ Sbjct: 125 LSALYQQLSLGIPFGPELLTFKTTTVFTPFVAAVLGLGINEGAYLSEIVRSGLNSVDKGQ 184 Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA-DLVSVGGT 355 EAA ALG++ + R ++LPQAMR I+PP ++ +++LK +SL +AV F DL V + Sbjct: 185 SEAAGALGMSKGQILRRIVLPQAMRVIVPPTGNETISMLKTTSLVLAVPFTLDLTFVTNS 244 Query: 356 IINQTGQAIEIIL---IWMFIYLSLSIMIALFMNRLNAK 391 + T Q I +++ IW I S+ ++ ++ R K Sbjct: 245 YASLTYQIIPLLIVAAIWYIIITSILMVGQHYIERYYGK 283 >gi|42518173|ref|NP_964103.1| ABC transporter permease component [Lactobacillus johnsonii NCC 533] gi|41582457|gb|AAS08069.1| ABC transporter permease component [Lactobacillus johnsonii NCC 533] Length = 537 Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 42/120 (35%), Positives = 75/120 (62%) Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 +S T A++AE++R G+ A P+GQ EAA ALG+TH + ++LPQA+R+ +P +T++++ Sbjct: 391 VSINTGAYLAEVIRGGINATPKGQFEAASALGMTHSQQMWHIILPQAIRNSLPSITNEFI 450 Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 +K++S+ + ++L VG T+ +QT + + I IYL L+ I N + K+ Sbjct: 451 VNIKDTSVLSIISVSELFFVGTTVASQTFEFFQTYFIISMIYLILTFSITRIFNFIEKKL 510 Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust. Identities = 27/75 (36%), Positives = 34/75 (45%), Gaps = 10/75 (13%) Query: 85 YATAILVGFVNTFWLAFSGMIPATIIGTLVG----------AGRLSANKLVAWICRVYVE 134 Y + IL G T LA G I IG LVG G+ K+V W+ VY+E Sbjct: 296 YGSMILGGVGMTLLLALVGTIAGFFIGLLVGIVRTIPTPKSTGKRWGLKIVNWLLAVYIE 355 Query: 135 VFRNIPPLVVIFFLY 149 VFR P +V +Y Sbjct: 356 VFRGTPMMVQAAVIY 370 >gi|42522400|ref|NP_967780.1| polar amino acid transport system permease protein [Bdellovibrio bacteriovorus HD100] gi|39574932|emb|CAE78773.1| polar amino acid transport system permease protein [Bdellovibrio bacteriovorus HD100] Length = 247 Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 45/121 (37%), Positives = 76/121 (62%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +ALS +AA+IAEI R+G+ ++ RGQ EAA +LGL++ + +++PQA R ++PPL ++ Sbjct: 123 LALSLNSAAYIAEIFRAGIQSIDRGQFEAARSLGLSYFHTMKSIIIPQAFRRMLPPLGNE 182 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 + LLK+SSL A+G A+L T + E L IYL +++ ++ ++RL Sbjct: 183 AITLLKDSSLVSAIGLAELAYAARTAAGAYARYWEPYLFISLIYLIITLGMSFVVHRLEK 242 Query: 391 K 391 + Sbjct: 243 R 243 >gi|291519629|emb|CBK74850.1| amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Butyrivibrio fibrisolvens 16/4] Length = 223 Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 49/139 (35%), Positives = 85/139 (61%), Gaps = 24/139 (17%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFN-FIGGSTVSPEFM---SLYIA 272 + +P++ ++ F+ FG+P L FN IGG ++ + + +A Sbjct: 60 RGVPMIVLAFFIYFGIPYL------------------FNTIIGGFAINLTALQAGTACLA 101 Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 L+C A++AEI+R+G+ +V GQMEAA +LGLT+ +A R V+LPQA+R++IP +Q++ Sbjct: 102 LNC--GAYMAEIIRAGIQSVDIGQMEAARSLGLTYSQAMRKVVLPQAIRTMIPTFINQFI 159 Query: 333 NLLKNSSLAVAVGFADLVS 351 LK++S+ +GF +LV+ Sbjct: 160 ITLKDTSILSVIGFPELVN 178 >gi|295092287|emb|CBK78394.1| amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Clostridium cf. saccharolyticum K10] Length = 214 Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 43/127 (33%), Positives = 84/127 (66%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +AL +AA+++E++RSG+ AV +GQMEAA +LGL HR+A V+LPQA+++I+P L ++ Sbjct: 88 VALCLNSAAYVSEVIRSGIQAVDKGQMEAARSLGLNHRQAMVKVILPQAIKNIMPALGNE 147 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++ ++K++SLA +L++V T+ ++E ++I IY ++ ++ +N + Sbjct: 148 FVMMIKDTSLASTFFVGELMTVWQTVRGVLYLSLEPLIIVGCIYFIVTFSLSKGINFMER 207 Query: 391 KIALKEK 397 ++ E+ Sbjct: 208 RMRANER 214 >gi|227551338|ref|ZP_03981387.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus faecium TX1330] gi|257887548|ref|ZP_05667201.1| amino acid ABC transporter [Enterococcus faecium 1,141,733] gi|257896042|ref|ZP_05675695.1| amino acid ABC transporter [Enterococcus faecium Com12] gi|293378786|ref|ZP_06624943.1| ABC transporter, permease protein [Enterococcus faecium PC4.1] gi|227179549|gb|EEI60521.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus faecium TX1330] gi|257823602|gb|EEV50534.1| amino acid ABC transporter [Enterococcus faecium 1,141,733] gi|257832607|gb|EEV59028.1| amino acid ABC transporter [Enterococcus faecium Com12] gi|292642579|gb|EFF60732.1| ABC transporter, permease protein [Enterococcus faecium PC4.1] Length = 218 Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 56/176 (31%), Positives = 90/176 (51%), Gaps = 25/176 (14%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 + LPLL I F F LP + + Q N F S AL+ + Sbjct: 63 RNLPLLLIIFFTYFALPQIGI---------------QMNI---------FWSAVAALTIF 98 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 +A ++EI R+GL AVP+GQMEA ++ GLT+ + R ++LPQA +S+IP + SQ ++L+K Sbjct: 99 ESAMLSEIFRAGLNAVPKGQMEAGLSTGLTYVETMRTIVLPQAFKSMIPAIVSQLISLIK 158 Query: 337 NSSLAVAVGFADLVSVGGTIINQ-TGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 ++SLAV + +L I Q T + + +I +Y + ++L L + Sbjct: 159 DTSLAVIISLPELSHQARIIYGQNTNYVLPMFIIMTLMYFVVCYALSLLSGYLEKR 214 >gi|26987392|ref|NP_742817.1| polar amino acid ABC transporter inner membrane subunit [Pseudomonas putida KT2440] gi|24982048|gb|AAN66281.1|AE016256_8 amino acid ABC transporter, permease protein, putative [Pseudomonas putida KT2440] Length = 273 Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 45/119 (37%), Positives = 75/119 (63%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IALS A+++EI R+G++ V RGQ EAA+ALG+ + ++LPQAMR IIPP +Q Sbjct: 146 IALSLNYGAYLSEIFRAGILGVARGQREAALALGMRTPQIFCHIILPQAMRVIIPPTANQ 205 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 ++++LK+SSL +G +++ + + + + +E++ IY LSI++ L RL Sbjct: 206 FISMLKDSSLISVMGVWEVMFLAQSYGRSSYRYLEMLTTAAVIYWVLSILLELLQARLE 264 >gi|312112152|ref|YP_003990468.1| polar amino acid ABC transporter inner membrane subunit [Geobacillus sp. Y4.1MC1] gi|311217253|gb|ADP75857.1| polar amino acid ABC transporter, inner membrane subunit [Geobacillus sp. Y4.1MC1] Length = 235 Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 64/207 (30%), Positives = 112/207 (54%), Gaps = 18/207 (8%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 V +F +G++L++ AT L+R K + + +Y+S I G P LV + + + + P Sbjct: 42 VITFAIGLILAI-ATALARISGVKALEIIARIYVSA--IRGTPLLVQL---FIIFYGLPN 95 Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 +G P F + I S A+ +EIVR+ ++++P+GQ EAA +LG+T +A Sbjct: 96 IG--------ITIPSFPAAIIGFSLNVGAYASEIVRAAILSIPKGQWEAAYSLGMTTGQA 147 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI----EI 366 R V+ PQA+R IPPL++ +++L+K++SLA + +++ I + + + E Sbjct: 148 LRRVIFPQAVRVSIPPLSNTFISLVKDTSLASLILVSEMFRKAQEIASTNYEFLLLYTEA 207 Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIA 393 +I+ I LSI+ RLN IA Sbjct: 208 AIIYWIICFLLSIVQNRIEERLNRYIA 234 >gi|288550086|ref|ZP_05969253.2| glutamine ABC transporter, permease protein [Enterobacter cancerogenus ATCC 35316] gi|288316709|gb|EFC55647.1| glutamine ABC transporter, permease protein [Enterobacter cancerogenus ATCC 35316] Length = 232 Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 60/206 (29%), Positives = 113/206 (54%), Gaps = 12/206 (5%) Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248 I V V G+++ L A +R + + L++I +I G P +V + Y F Sbjct: 38 ISVLGLVGGLIIGLVAG-FARTYGGWIANHIALVFIE--VIRGTPIVVQVMFIY---FAL 91 Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308 P+ FN + + P F + + + + A+IAEI R ++++ +G EA +ALGL+ R Sbjct: 92 PM--AFNDL---RIDP-FSAAVVTIMINSGAYIAEITRGAVLSIHKGFSEAGLALGLSRR 145 Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368 + R V+LP A+R ++PPL +Q++ +K++SL + +G A+L G II +A+EI Sbjct: 146 ETIRHVILPLALRRMLPPLGNQWIISIKDTSLFIVIGVAELTRQGQEIIAGNFRALEIWS 205 Query: 369 IWMFIYLSLSIMIALFMNRLNAKIAL 394 +YL ++++++ + RL ++ + Sbjct: 206 AVAVVYLIITLVLSFVLRRLERRMKI 231 >gi|317506835|ref|ZP_07964608.1| extracellular solute-binding protein, family 3 [Segniliparus rugosus ATCC BAA-974] gi|316254871|gb|EFV14168.1| extracellular solute-binding protein, family 3 [Segniliparus rugosus ATCC BAA-974] Length = 473 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 56/156 (35%), Positives = 88/156 (56%), Gaps = 14/156 (8%) Query: 194 FVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ 253 FVLG+V+++ T L+R + AL Y+S +I G P LV + + ++F P G Sbjct: 277 FVLGLVIAVL-TALARISRNRAVSALARSYVS--VIRGTPLLVQL---FLIYFALPEFG- 329 Query: 254 FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313 P F S +ALS A+ +E+VR+ ++AVP GQ EAA ALG + + RL Sbjct: 330 -------VKLPPFPSAVVALSLSVGAYASEVVRAAILAVPSGQSEAARALGFSRGQTLRL 382 Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349 V+ PQA + +PPL++ + L+K++SLA + +L Sbjct: 383 VVFPQAAKIAVPPLSNTLIALVKDTSLAATIQVTEL 418 >gi|148545936|ref|YP_001266038.1| polar amino acid ABC transporter inner membrane subunit [Pseudomonas putida F1] gi|148509994|gb|ABQ76854.1| polar amino acid ABC transporter, inner membrane subunit [Pseudomonas putida F1] Length = 273 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 45/119 (37%), Positives = 75/119 (63%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IALS A+++EI R+G++ V RGQ EAA+ALG+ + ++LPQAMR IIPP +Q Sbjct: 146 IALSLNYGAYLSEIFRAGILGVARGQREAALALGMRTPQIFCHIILPQAMRVIIPPTANQ 205 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 ++++LK+SSL +G +++ + + + + +E++ IY LSI++ L RL Sbjct: 206 FISMLKDSSLISVMGVWEVMFLAQSYGRSSYRYLEMLTTAAVIYWVLSILLELLQARLE 264 >gi|15896853|ref|NP_350202.1| amino acid ABC transporter permease [Clostridium acetobutylicum ATCC 824] gi|15026719|gb|AAK81542.1|AE007858_3 Amino acid ABC transporter, permease component [Clostridium acetobutylicum ATCC 824] gi|325511027|gb|ADZ22663.1| Amino acid ABC transporter, permease component [Clostridium acetobutylicum EA 2018] Length = 217 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 38/124 (30%), Positives = 77/124 (62%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + LS + A+IAEI+R G++A+ GQ EA+ ALGLT+ + + ++LPQA+R +IPP ++ Sbjct: 93 LGLSLNSGAYIAEIIRGGILAIDNGQFEASKALGLTYGQTMKRIILPQAIRVVIPPCGNE 152 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++ ++K++SL + +L+ +++ +G A+ L YL L+ + +++ Sbjct: 153 FIAMIKDTSLVSVITMEELLRKAQLLVSSSGDAVTPYLFAGIFYLILTTIFTGIFSKIEK 212 Query: 391 KIAL 394 K+++ Sbjct: 213 KLSV 216 >gi|22126342|ref|NP_669765.1| ABC transporter permease for cystine [Yersinia pestis KIM 10] gi|45441365|ref|NP_992904.1| putative amino acid ABC transporter permease [Yersinia pestis biovar Microtus str. 91001] gi|108807219|ref|YP_651135.1| putative amino-acid ABC transporter permease [Yersinia pestis Antiqua] gi|108812437|ref|YP_648204.1| amino-acid ABC transporter (permease) [Yersinia pestis Nepal516] gi|145598568|ref|YP_001162644.1| amino-acid ABC transporter (permease) [Yersinia pestis Pestoides F] gi|149366207|ref|ZP_01888242.1| putative amino-acid ABC transporter (permease) [Yersinia pestis CA88-4125] gi|162420463|ref|YP_001606502.1| amino acid ABC transporter permease [Yersinia pestis Angola] gi|165926030|ref|ZP_02221862.1| amino acid ABC transporter, permease protein [Yersinia pestis biovar Orientalis str. F1991016] gi|165938721|ref|ZP_02227276.1| amino acid ABC transporter, permease protein [Yersinia pestis biovar Orientalis str. IP275] gi|166010948|ref|ZP_02231846.1| amino acid ABC transporter, permease protein [Yersinia pestis biovar Antiqua str. E1979001] gi|166210693|ref|ZP_02236728.1| amino acid ABC transporter, permease protein [Yersinia pestis biovar Antiqua str. B42003004] gi|167401053|ref|ZP_02306556.1| amino acid ABC transporter, permease protein [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167420087|ref|ZP_02311840.1| amino acid ABC transporter, permease protein [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167425831|ref|ZP_02317584.1| amino acid ABC transporter, permease protein [Yersinia pestis biovar Mediaevalis str. K1973002] gi|167469082|ref|ZP_02333786.1| amino acid ABC transporter, permease protein [Yersinia pestis FV-1] gi|218928966|ref|YP_002346841.1| putative amino-acid ABC transporter (permease) [Yersinia pestis CO92] gi|229896295|ref|ZP_04511465.1| predicted transporter subunit: membrane component of ABC superfamily [Yersinia pestis Pestoides A] gi|229897232|ref|ZP_04512388.1| predicted transporter subunit: membrane component of ABC superfamily [Yersinia pestis biovar Orientalis str. PEXU2] gi|229897959|ref|ZP_04513110.1| predicted transporter subunit: membrane component of ABC superfamily [Yersinia pestis biovar Orientalis str. India 195] gi|229902810|ref|ZP_04517927.1| predicted transporter subunit: membrane component of ABC superfamily [Yersinia pestis Nepal516] gi|270486599|ref|ZP_06203673.1| ABC transporter, permease protein [Yersinia pestis KIM D27] gi|294503990|ref|YP_003568052.1| putative amino-acid ABC transporter (permease) [Yersinia pestis Z176003] gi|21959324|gb|AAM86016.1|AE013849_7 putative ABC transporter permease for cystine [Yersinia pestis KIM 10] gi|45436225|gb|AAS61781.1| putative amino-acid ABC transporter (permease) [Yersinia pestis biovar Microtus str. 91001] gi|108776085|gb|ABG18604.1| amino-acid ABC transporter (permease) [Yersinia pestis Nepal516] gi|108779132|gb|ABG13190.1| putative amino-acid ABC transporter (permease) [Yersinia pestis Antiqua] gi|115347577|emb|CAL20487.1| putative amino-acid ABC transporter (permease) [Yersinia pestis CO92] gi|145210264|gb|ABP39671.1| amino-acid ABC transporter (permease) [Yersinia pestis Pestoides F] gi|149292620|gb|EDM42694.1| putative amino-acid ABC transporter (permease) [Yersinia pestis CA88-4125] gi|162353278|gb|ABX87226.1| amino acid ABC transporter, permease protein [Yersinia pestis Angola] gi|165913335|gb|EDR31957.1| amino acid ABC transporter, permease protein [Yersinia pestis biovar Orientalis str. IP275] gi|165922234|gb|EDR39411.1| amino acid ABC transporter, permease protein [Yersinia pestis biovar Orientalis str. F1991016] gi|165990292|gb|EDR42593.1| amino acid ABC transporter, permease protein [Yersinia pestis biovar Antiqua str. E1979001] gi|166207873|gb|EDR52353.1| amino acid ABC transporter, permease protein [Yersinia pestis biovar Antiqua str. B42003004] gi|166961782|gb|EDR57803.1| amino acid ABC transporter, permease protein [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167049442|gb|EDR60850.1| amino acid ABC transporter, permease protein [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167055230|gb|EDR65027.1| amino acid ABC transporter, permease protein [Yersinia pestis biovar Mediaevalis str. K1973002] gi|229680257|gb|EEO76356.1| predicted transporter subunit: membrane component of ABC superfamily [Yersinia pestis Nepal516] gi|229689000|gb|EEO81065.1| predicted transporter subunit: membrane component of ABC superfamily [Yersinia pestis biovar Orientalis str. India 195] gi|229693569|gb|EEO83618.1| predicted transporter subunit: membrane component of ABC superfamily [Yersinia pestis biovar Orientalis str. PEXU2] gi|229701218|gb|EEO89247.1| predicted transporter subunit: membrane component of ABC superfamily [Yersinia pestis Pestoides A] gi|262361825|gb|ACY58546.1| putative amino-acid ABC transporter (permease) [Yersinia pestis D106004] gi|262366039|gb|ACY62596.1| putative amino-acid ABC transporter (permease) [Yersinia pestis D182038] gi|270335103|gb|EFA45880.1| ABC transporter, permease protein [Yersinia pestis KIM D27] gi|294354449|gb|ADE64790.1| putative amino-acid ABC transporter (permease) [Yersinia pestis Z176003] gi|320015412|gb|ADV98983.1| putative transporter subunit: membrane component of ABC superfamily [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 220 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 64/218 (29%), Positives = 114/218 (52%), Gaps = 18/218 (8%) Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240 LT+ + F +LG +L++ RLS HF P IS F + LIA Sbjct: 21 LTLQLSLGGMFFGLLLGFMLAMM--RLS-HFW-------PFSLISRFYVSIFRGTPLIAQ 70 Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300 + +++ P QF G + P +L I LS TAA+ +E +R+ + ++ +GQ EAA Sbjct: 71 LFMIYYGLP---QF----GIELEPMPAAL-IGLSLNTAAYTSETLRAAISSIEKGQWEAA 122 Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 ++G+T +A V+LPQA R+ +PPL + ++ L+K++SLA + +L I ++T Sbjct: 123 ASIGMTRWQALYRVILPQAGRTALPPLGNSFIGLVKDTSLAATIQVPELFRQAQLITSRT 182 Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 + + L IY ++ +++ NRL A + ++++ Sbjct: 183 MEVFTMYLAASLIYWIMATLLSALQNRLEAHVNRQDQE 220 >gi|325292972|ref|YP_004278836.1| general L-amino acid transport system permease protein AapM [Agrobacterium sp. H13-3] gi|325060825|gb|ADY64516.1| general L-amino acid transport system permease protein AapM [Agrobacterium sp. H13-3] Length = 385 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 35/96 (36%), Positives = 67/96 (69%), Gaps = 2/96 (2%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 +F+ + +S +++A++AE++R GL A+P+GQ E A +LGL + + TRL++LPQA++ +I Sbjct: 247 KFLRALVGVSLFSSAYMAEVIRGGLQAIPKGQYEGADSLGLNYWQKTRLIVLPQALKLVI 306 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 P + + ++ L K++SL +G DL+ + +NQ+ Sbjct: 307 PGIVNTFIGLFKDTSLVSIIGMFDLLGI--VTLNQS 340 >gi|260426627|ref|ZP_05780606.1| glutamate/glutamine/aspartate/asparagine transport system permeaseprotein BztC [Citreicella sp. SE45] gi|260421119|gb|EEX14370.1| glutamate/glutamine/aspartate/asparagine transport system permeaseprotein BztC [Citreicella sp. SE45] Length = 438 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 44/113 (38%), Positives = 69/113 (61%), Gaps = 8/113 (7%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I ++ +++A+IAE+VR GL A+P+GQ EAA ALGL + K+ RLV+LPQA++ IP + + Sbjct: 309 IMVTLFSSAYIAEVVRGGLAALPKGQYEAADALGLDYWKSMRLVILPQALKISIPGIVNT 368 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 ++ L K+++L V +G D + + I T W IY L + I L Sbjct: 369 FIGLFKDTTLVVFIGLLDPIGLSNAIRASTE--------WNGIYWELFVFIGL 413 >gi|114705498|ref|ZP_01438401.1| ABC transporter permease protein [Fulvimarina pelagi HTCC2506] gi|114538344|gb|EAU41465.1| ABC transporter permease protein [Fulvimarina pelagi HTCC2506] Length = 224 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 54/143 (37%), Positives = 80/143 (55%), Gaps = 13/143 (9%) Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268 R + K + L ++YI F +P LV + + Y + P LG F S Sbjct: 49 RLYGAKPVRFLAIVYIDVFR--AIPVLVWLVIVY---YALPFLG--------VRLSAFAS 95 Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328 AL+ ++A+ AEI R+G+ AVPRGQ EAA ++GL R V+LPQA+R +IPPLT Sbjct: 96 ATTALTMISSAYTAEIYRAGIEAVPRGQFEAAQSIGLGSFDLMRDVVLPQAIRIVIPPLT 155 Query: 329 SQYLNLLKNSSLAVAVGFADLVS 351 + +N+LK+++LA V DL+ Sbjct: 156 NNSINVLKDTALASVVALPDLLK 178 >gi|25028403|ref|NP_738457.1| glutamate transporter permease protein GluD [Corynebacterium efficiens YS-314] gi|259507460|ref|ZP_05750360.1| glutamate transport system permease protein GluD [Corynebacterium efficiens YS-314] gi|23493688|dbj|BAC18657.1| glutamate transporter permease protein GluD [Corynebacterium efficiens YS-314] gi|259164948|gb|EEW49502.1| glutamate transport system permease protein GluD [Corynebacterium efficiens YS-314] Length = 316 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 46/130 (35%), Positives = 79/130 (60%), Gaps = 10/130 (7%) Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283 I TF +P L+L+ YQL ++ + ++ F ++ L+ Y + IAE Sbjct: 112 IETFR--AIPVLILMIFAYQL------FARYQLVPSRQLA--FAAVVFGLTMYNGSVIAE 161 Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343 I+RSG+ ++P+GQ EAAIALG++ R+ T +LLPQA+ +++P L +Q + LK+S+L Sbjct: 162 ILRSGIASLPKGQREAAIALGMSTRQTTWSILLPQAVAAMLPALIAQMVIALKDSALGYQ 221 Query: 344 VGFADLVSVG 353 +G+ ++V G Sbjct: 222 IGYIEVVRSG 231 Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 29/87 (33%), Positives = 49/87 (56%), Gaps = 1/87 (1%) Query: 64 LSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK 123 L E + D+ P+ ++ T +L G T A + ++ A I+GTL+G GR+S + Sbjct: 44 LQENGQLDGDK-WTPFLDPQTWTTYLLPGLWGTLKAAVASILLALIMGTLLGLGRISEIR 102 Query: 124 LVAWICRVYVEVFRNIPPLVVIFFLYK 150 L+ W C + +E FR IP L+++ F Y+ Sbjct: 103 LLRWFCGIIIETFRAIPVLILMIFAYQ 129 >gi|222102913|ref|YP_002539952.1| ABC transporter membrane spanning protein (amino acid) [Agrobacterium vitis S4] gi|221739514|gb|ACM40247.1| ABC transporter membrane spanning protein (amino acid) [Agrobacterium vitis S4] Length = 235 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 47/111 (42%), Positives = 68/111 (61%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I L AA+ +E +RSGL ++ GQMEAA ALG + A R V++PQ +R+ +PPL + Sbjct: 106 IGLGLCQAAYFSEDLRSGLRSISPGQMEAARALGHGYLSAMRYVMIPQGVRNALPPLINH 165 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 ++L KNSSLA+ VG ++L I N T + E LI +YL S++I Sbjct: 166 TVSLFKNSSLAIVVGASELTHAVKEIENITFRTFESYLIGTVLYLFFSLLI 216 >gi|209695502|ref|YP_002263431.1| general L-amino acid ABC transporter permease protein [Aliivibrio salmonicida LFI1238] gi|208009454|emb|CAQ79740.1| general L-amino acid ABC transporter permease protein [Aliivibrio salmonicida LFI1238] Length = 365 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 35/83 (42%), Positives = 60/83 (72%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I + ++AA++AE++R GL A+P+GQ EAA ALGL + K RL++LPQA++ IP + + Sbjct: 235 IGVVLFSAAYMAEVIRGGLQAIPKGQYEAADALGLGYWKKMRLIILPQALKITIPSIVNT 294 Query: 331 YLNLLKNSSLAVAVGFADLVSVG 353 ++ L K++SL + +G D++ +G Sbjct: 295 FIGLFKDTSLVLIIGMFDVLGIG 317 >gi|228989527|ref|ZP_04149512.1| Amino acid ABC transproter, permease [Bacillus pseudomycoides DSM 12442] gi|228995720|ref|ZP_04155383.1| Amino acid ABC transproter, permease [Bacillus mycoides Rock3-17] gi|229003347|ref|ZP_04161177.1| Amino acid ABC transproter, permease [Bacillus mycoides Rock1-4] gi|228757965|gb|EEM07180.1| Amino acid ABC transproter, permease [Bacillus mycoides Rock1-4] gi|228764097|gb|EEM12981.1| Amino acid ABC transproter, permease [Bacillus mycoides Rock3-17] gi|228770252|gb|EEM18831.1| Amino acid ABC transproter, permease [Bacillus pseudomycoides DSM 12442] Length = 230 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 47/126 (37%), Positives = 75/126 (59%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IAL+ + A+I EI R + +V RGQ+EAA +LG+++ A R ++LPQA R IPPL +Q Sbjct: 89 IALAIHNGAYITEIFRGSIQSVDRGQLEAARSLGMSYPLAMRRIILPQAFRLSIPPLGNQ 148 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++ LK+SSL VG ++L G +I + +E ++ YL L ++ +N L Sbjct: 149 FVIGLKDSSLVAYVGMSELWGSGLSIAAGNFKQLETYIVVSAYYLVLVLLFTYLVNLLEK 208 Query: 391 KIALKE 396 K+ K+ Sbjct: 209 KLQRKQ 214 >gi|298346993|ref|YP_003719680.1| amino acid ABC transporter membrane protein [Mobiluncus curtisii ATCC 43063] gi|304389300|ref|ZP_07371265.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|298237054|gb|ADI68186.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Mobiluncus curtisii ATCC 43063] gi|304327418|gb|EFL94651.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Mobiluncus curtisii subsp. curtisii ATCC 35241] Length = 217 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 41/133 (30%), Positives = 77/133 (57%), Gaps = 1/133 (0%) Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320 + S F + IA S AA+ AEI R G A+P+GQ EAA LG + ++ + LPQ Sbjct: 82 SASYNFWAAIIAFSVNYAAYFAEIYRGGFQAIPQGQTEAAFVLGYSQQRTFYTIKLPQMF 141 Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380 R+++P +T++ + L+K++SLA + F ++ S+ + T + +F Y+ +++ Sbjct: 142 RTVLPSITNEVITLVKDTSLAQVISFLEMFSIAREYASTTASMAPFVAAGIFYYV-FNMV 200 Query: 381 IALFMNRLNAKIA 393 +A+ MN+L +++ Sbjct: 201 VAVTMNKLEKRVS 213 >gi|227504862|ref|ZP_03934911.1| glutamate transporter permease protein GluD [Corynebacterium striatum ATCC 6940] gi|227198553|gb|EEI78601.1| glutamate transporter permease protein GluD [Corynebacterium striatum ATCC 6940] Length = 312 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 53/166 (31%), Positives = 93/166 (56%), Gaps = 21/166 (12%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI---FGLPTLVLIALKYQLHFD 247 + + V G+V L RLS H P+ ++ ++ +P L+L+ YQL Sbjct: 82 LLAIVFGVVFGL--GRLSEH--------RPIRWVCGVVVEFFRAIPVLLLMIFAYQL--- 128 Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307 ++ + ++ F ++ AL+ Y + +AEI+RSG+ ++P+GQ EAA ALGL+H Sbjct: 129 ---FAVYDLVPSKHLA--FGAVVFALTLYNGSVVAEILRSGIRSLPKGQTEAAKALGLSH 183 Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353 ++ VLLPQA+ +++P L SQ + LK+S+L +G+ ++V G Sbjct: 184 QQTMFKVLLPQAVAAMLPALISQMVIALKDSALGYQIGYVEVVRSG 229 Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 38/141 (26%), Positives = 66/141 (46%), Gaps = 22/141 (15%) Query: 15 RMKFLYDM-----RVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAG 69 R LYD R +N +I A++ T + W + E++ LS Sbjct: 4 RATVLYDAPGPKGRRNNAIYTVITAIVATAVLAWVFMKLN---ERNQLS----------- 49 Query: 70 FEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWIC 129 + P+ + ++ T +L G T + A + ++ A + G + G GRLS ++ + W+C Sbjct: 50 ---PELWTPFLNSQTWTTYLLPGLKGTIFSAVASILLAIVFGVVFGLGRLSEHRPIRWVC 106 Query: 130 RVYVEVFRNIPPLVVIFFLYK 150 V VE FR IP L+++ F Y+ Sbjct: 107 GVVVEFFRAIPVLLLMIFAYQ 127 >gi|121604957|ref|YP_982286.1| polar amino acid ABC transporter inner membrane subunit [Polaromonas naphthalenivorans CJ2] gi|120593926|gb|ABM37365.1| amino acid ABC transporter membrane protein, PAAT family [Polaromonas naphthalenivorans CJ2] Length = 255 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 43/133 (32%), Positives = 80/133 (60%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+S +AL+ + A+I+EI R+G+ ++ +GQ+EA+ +LG++ + ++LPQA R ++P Sbjct: 123 FLSGVVALTLNSGAYISEIFRAGIQSIDKGQVEASRSLGMSFPRTMYHIVLPQAFRRMLP 182 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PL + ++LLK+SSL A+G A+L T+ + E L +Y L++ +A + Sbjct: 183 PLGNNAISLLKDSSLISAIGLAELAYAARTVAGAYSRYWEPYLTISLMYWVLTLGLAYGV 242 Query: 386 NRLNAKIALKEKK 398 RL A+ + + Sbjct: 243 KRLEARYGRGDSR 255 >gi|320355395|ref|YP_004196734.1| PAAT family amino acid ABC transporter membrane protein [Desulfobulbus propionicus DSM 2032] gi|320123897|gb|ADW19443.1| amino acid ABC transporter membrane protein, PAAT family [Desulfobulbus propionicus DSM 2032] Length = 262 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 55/167 (32%), Positives = 95/167 (56%), Gaps = 17/167 (10%) Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247 ++ V S L IV+ L T L R + + LY+ ++ G+P LV QL + Sbjct: 67 EVTVLSITLAIVIGLL-TGLGRLSRNRVINLIASLYVE--VVRGIPLLV------QLFYI 117 Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALS-CYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306 LG+F + P+ ++ IA++ CY A++ E+ R+G+ ++ GQ EAA++LG Sbjct: 118 YYALGRFVRV------PDMVAAVIAMAFCY-GAYMGEVFRAGIKSIDFGQTEAALSLGFN 170 Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353 HR+ V+LPQA R+I+PP+ ++++ LLK++SL + AD++ G Sbjct: 171 HRQTMAYVILPQAWRTILPPVGNEFIALLKDTSLVSILAVADILRRG 217 Score = 49.7 bits (117), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 27/69 (39%), Positives = 42/69 (60%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151 G + TF + + A +IG L G GRLS N+++ I +YVEV R IP LV +F++Y + Sbjct: 61 GILITFEVTVLSITLAIVIGLLTGLGRLSRNRVINLIASLYVEVVRGIPLLVQLFYIYYA 120 Query: 152 VLSVLPIPD 160 + + +PD Sbjct: 121 LGRFVRVPD 129 >gi|24636876|sp|Q8RQL4|GLUD_COREF RecName: Full=Glutamate transport system permease protein gluD gi|20126700|dbj|BAB88901.1| gluD [Corynebacterium efficiens] Length = 277 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 46/130 (35%), Positives = 79/130 (60%), Gaps = 10/130 (7%) Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283 I TF +P L+L+ YQL ++ + ++ F ++ L+ Y + IAE Sbjct: 73 IETFR--AIPVLILMIFAYQL------FARYQLVPSRQLA--FAAVVFGLTMYNGSVIAE 122 Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343 I+RSG+ ++P+GQ EAAIALG++ R+ T +LLPQA+ +++P L +Q + LK+S+L Sbjct: 123 ILRSGIASLPKGQREAAIALGMSTRQTTWSILLPQAVAAMLPALIAQMVIALKDSALGYQ 182 Query: 344 VGFADLVSVG 353 +G+ ++V G Sbjct: 183 IGYIEVVRSG 192 Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 29/87 (33%), Positives = 49/87 (56%), Gaps = 1/87 (1%) Query: 64 LSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK 123 L E + D+ P+ ++ T +L G T A + ++ A I+GTL+G GR+S + Sbjct: 5 LQENGQLDGDK-WTPFLDPQTWTTYLLPGLWGTLKAAVASILLALIMGTLLGLGRISEIR 63 Query: 124 LVAWICRVYVEVFRNIPPLVVIFFLYK 150 L+ W C + +E FR IP L+++ F Y+ Sbjct: 64 LLRWFCGIIIETFRAIPVLILMIFAYQ 90 >gi|307300617|ref|ZP_07580392.1| polar amino acid ABC transporter, inner membrane subunit [Sinorhizobium meliloti BL225C] gi|306904151|gb|EFN34736.1| polar amino acid ABC transporter, inner membrane subunit [Sinorhizobium meliloti BL225C] Length = 288 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 53/175 (30%), Positives = 90/175 (51%), Gaps = 7/175 (4%) Query: 231 GLPTLVLIALKY-------QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283 G P LV + Y QL P + + +T+ + + L A+++E Sbjct: 99 GTPVLVQLIFWYNLGALFPQLSVGVPFTSLWVSVPTNTLISPVTAAVLGLGLNEGAYMSE 158 Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343 I+RSGL++V GQ +AA +LG+T+ K +LLPQAM IIPP +Q + +LK SSL Sbjct: 159 IIRSGLMSVDPGQRQAAKSLGMTNGKTLWRILLPQAMPIIIPPTGNQTIGMLKTSSLVSV 218 Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 + ADL+ TI ++ Q I ++++ YL+ + +++ R+ A ++ Sbjct: 219 ISLADLLYSAQTIYSRNFQTIPLLIVACIWYLAATTILSAVQVRIERHFARSSQR 273 Score = 36.2 bits (82), Expect = 8.4, Method: Compositional matrix adjust. Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 3/87 (3%) Query: 81 SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140 +D + + IL G T WL M+ ++GT+ ++ N +++ + Y+ FR P Sbjct: 42 ADYLFDSRILWGLSLTIWLTVVTMVIGVVLGTIFAIMAMADNVVISTVANAYIWFFRGTP 101 Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPF 167 LV + F Y L L P S+ +PF Sbjct: 102 VLVQLIFWYN--LGAL-FPQLSVGVPF 125 >gi|282862286|ref|ZP_06271348.1| polar amino acid ABC transporter, inner membrane subunit [Streptomyces sp. ACTE] gi|282562625|gb|EFB68165.1| polar amino acid ABC transporter, inner membrane subunit [Streptomyces sp. ACTE] Length = 215 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 42/101 (41%), Positives = 66/101 (65%), Gaps = 1/101 (0%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +AL YT++F+ E VRSG+ VP GQ EAA ++G+T + R+V+LPQA R++IPPL+S Sbjct: 90 LALGLYTSSFVCEAVRSGINTVPLGQAEAARSIGMTFAQTLRMVILPQATRTVIPPLSSI 149 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371 ++ L KNS++A A +L +++ G I + IW+ Sbjct: 150 FIALTKNSAIAGAFSVTELFG-WQKLMSDRGYDIVPVFIWV 189 >gi|262394186|ref|YP_003286040.1| amino acid ABC transporter permease [Vibrio sp. Ex25] gi|262337780|gb|ACY51575.1| amino acid ABC transporter permease protein [Vibrio sp. Ex25] Length = 365 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 36/98 (36%), Positives = 66/98 (67%) Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315 F+ + + + + I + + +A++AE+VR GL A+P+GQ EAA ALGL++ K T L++ Sbjct: 220 FMSEGSETDKLIRALIGVVMFASAYMAEVVRGGLQAIPKGQYEAADALGLSYWKKTGLII 279 Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353 LPQA++ IP + + ++ L K++SL + +G D++ +G Sbjct: 280 LPQALKITIPSIVNTFIGLFKDTSLVLIIGMFDVLGIG 317 Score = 36.6 bits (83), Expect = 6.8, Method: Compositional matrix adjust. Identities = 19/55 (34%), Positives = 33/55 (60%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIF 146 G + T +A G++ + IG ++ GR S ++ IC VY+EV+R +P + V+F Sbjct: 157 GLLVTLIIALVGIVVSLPIGVVLALGRRSEMPIIRSICTVYIEVWRGVPLITVLF 211 >gi|227873776|ref|ZP_03992005.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Oribacterium sinus F0268] gi|227840392|gb|EEJ50793.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Oribacterium sinus F0268] Length = 220 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 56/183 (30%), Positives = 93/183 (50%), Gaps = 23/183 (12%) Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQF--NFIGGSTVSPEFMSLYI 271 K L + I+TF L L+ I YQ+ P L +F +F+ G+ + + Y Sbjct: 17 KVPVTLEIALIATFFSLVLGILIAIISYYQVPILNP-LCKFLVSFMRGTPIVAQLYFFYF 75 Query: 272 ALSCYT--------------------AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311 L+ Y+ AF++E +R L++V GQ EAA++LG+TH + Sbjct: 76 GLAVYSVLVRDMTPISAVAFVLSVNVGAFMSESIRGALMSVEEGQKEAALSLGMTHFQVV 135 Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371 ++LPQA+R IPPL + ++NL+K+SSLA +G D++ T +Q+ + E+ M Sbjct: 136 YRIVLPQAIRVAIPPLFNDFINLIKSSSLAFMLGVPDIMGAARTEGSQSYRYFEVYGAVM 195 Query: 372 FIY 374 +Y Sbjct: 196 LVY 198 >gi|124265325|ref|YP_001019329.1| amino acid ABC transporter [Methylibium petroleiphilum PM1] gi|124258100|gb|ABM93094.1| amino acid ABC transporter [Methylibium petroleiphilum PM1] Length = 250 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 47/132 (35%), Positives = 80/132 (60%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F S +AL+ A+I+EI R+G+ ++ GQ +AA +LGLTH ++ R V+LPQA+R ++P Sbjct: 119 FFSGALALTLNAGAYISEIFRAGIQSIHGGQTQAAYSLGLTHVQSMRHVILPQAVRRMVP 178 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PL ++ + L+K+SSL A+G A+L T+ + E L +YL L+ +++ Sbjct: 179 PLVNEAVTLIKDSSLVSAIGLAELALAARTVAGAYSRYWEPYLAISAVYLLLTWLLSTLA 238 Query: 386 NRLNAKIALKEK 397 RL + L+ + Sbjct: 239 KRLESPDHLRGR 250 >gi|269968793|ref|ZP_06182782.1| amino acid ABC transporter, permease protein [Vibrio alginolyticus 40B] gi|269826605|gb|EEZ80950.1| amino acid ABC transporter, permease protein [Vibrio alginolyticus 40B] Length = 365 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 36/98 (36%), Positives = 66/98 (67%) Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315 F+ + + + + I + + +A++AE+VR GL A+P+GQ EAA ALGL++ K T L++ Sbjct: 220 FMSEGSETDKLIRALIGVVMFASAYMAEVVRGGLQAIPKGQYEAADALGLSYWKKTGLII 279 Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353 LPQA++ IP + + ++ L K++SL + +G D++ +G Sbjct: 280 LPQALKITIPSIVNTFIGLFKDTSLVLIIGMFDVLGIG 317 Score = 36.6 bits (83), Expect = 6.8, Method: Compositional matrix adjust. Identities = 19/55 (34%), Positives = 33/55 (60%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIF 146 G + T +A G++ + IG ++ GR S ++ IC VY+EV+R +P + V+F Sbjct: 157 GLLVTLIIALVGIVVSLPIGVVLALGRRSEMPIIRSICTVYIEVWRGVPLITVLF 211 >gi|206971176|ref|ZP_03232127.1| amino acid ABC transporter, permease protein [Bacillus cereus AH1134] gi|218899316|ref|YP_002447727.1| amino acid ABC transporter, permease protein [Bacillus cereus G9842] gi|206733948|gb|EDZ51119.1| amino acid ABC transporter, permease protein [Bacillus cereus AH1134] gi|218541175|gb|ACK93569.1| amino acid ABC transporter, permease protein [Bacillus cereus G9842] gi|326941933|gb|AEA17829.1| arginine ABC transporter permease [Bacillus thuringiensis serovar chinensis CT-43] Length = 219 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 53/206 (25%), Positives = 105/206 (50%), Gaps = 29/206 (14%) Query: 193 SFVLGIVLSLF------ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246 F+LG +L+L A ++ F+ + PL+ + FG+P ++ Y++ Sbjct: 33 GFILGTLLALCKIARIRALNIAADFYTSIFRGTPLVLQLMIIYFGVPQII----GYEI-- 86 Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306 P F++ +A S + A+++E++R+G+ AV +GQ EAA+ALG+ Sbjct: 87 -----------------PAFLAAVLAFSLNSGAYMSEVIRAGIQAVDKGQTEAAMALGIP 129 Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 + K R ++ PQA+++I+P L +++ L K S++ +G DL+ + +T + +E Sbjct: 130 YGKMMRNIIFPQALKNILPALVNEFATLTKESAVVTVIGATDLMRRAYIVGGETFKYLEP 189 Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKI 392 +L IY L I++ L + ++ Sbjct: 190 LLFVGLIYYMLVIILTLVGKAIEGRM 215 >gi|153832989|ref|ZP_01985656.1| amino acid ABC transporter, permease protein [Vibrio harveyi HY01] gi|148870710|gb|EDL69616.1| amino acid ABC transporter, permease protein [Vibrio harveyi HY01] Length = 306 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 44/144 (30%), Positives = 80/144 (55%) Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307 +P Q F G + + S + + ++A+IAE+VR+GL ++ +GQ EAA +LGL+ Sbjct: 157 EPNAVQSFFFGPANLWENLASGVLCVGLLSSAYIAEVVRAGLQSIDKGQWEAADSLGLSS 216 Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367 R V+ PQ +++I P L Q ++L+K++S+ + ++ VG + N +G EI Sbjct: 217 WVKYRFVIAPQVLKAITPALAGQTISLVKDTSIVSLISIQEMTFVGTEMANSSGYIFEIW 276 Query: 368 LIWMFIYLSLSIMIALFMNRLNAK 391 LI F+Y + +++F + K Sbjct: 277 LIVGFVYFLICFGLSMFFRYIEKK 300 >gi|120405655|ref|YP_955484.1| polar amino acid ABC transporter inner membrane subunit [Mycobacterium vanbaalenii PYR-1] gi|119958473|gb|ABM15478.1| amino acid ABC transporter membrane protein, PAAT family / amino acid ABC transporter substrate-binding protein, PAAT family [Mycobacterium vanbaalenii PYR-1] Length = 492 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 61/208 (29%), Positives = 104/208 (50%), Gaps = 33/208 (15%) Query: 193 SFVLGIVLSLFATRLSRHF--------HEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244 + VLG++ LF R+SR + + PLL + F+ FG+P+ AL +++ Sbjct: 308 ALVLGVMFGLF--RVSRSIWLRAIGTTYVDIFRGTPLLVQAFFIYFGVPS----ALDFRM 361 Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304 + I LS A++ EIVR G+ +V +GQMEAA +LG Sbjct: 362 -------------------TALTAGIITLSLNAGAYMTEIVRGGIQSVDKGQMEAARSLG 402 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364 + + R V+LPQA+R++IP +Q++ LK++S+ +G A+L G II + Q+ Sbjct: 403 IGYLPTMRKVILPQAIRTMIPSYVNQFVITLKDTSILSVIGIAELTQTGRLIIARNYQSF 462 Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKI 392 + LI IY + + + +RL ++ Sbjct: 463 TMWLIIGVIYFIVIMALTKLSDRLERRL 490 >gi|27382025|ref|NP_773554.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] gi|27355195|dbj|BAC52179.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] Length = 222 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 51/151 (33%), Positives = 85/151 (56%), Gaps = 7/151 (4%) Query: 247 DKPVLGQFNFI------GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300 + P LGQ FI G + P ++ IAL A+ EI+R G+ ++ +GQ+EA Sbjct: 66 NTPFLGQIYFIFFALPLVGVRLDPTLTAI-IALGVNGGAYAIEIIRGGVQSINKGQVEAG 124 Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 +AL L+ + RL++L A+R+I P LTSQ++ L +S+A A+ +L SVG TI T Sbjct: 125 LALSLSRAQVFRLIVLKPALRAIYPSLTSQFIMLTLTTSIASAISAYELTSVGQTIETNT 184 Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 ++ E+ + +Y ++S M+ +NA+ Sbjct: 185 FRSFEVYGVVTLLYFAMSWMLMQMFALINAR 215 >gi|259501520|ref|ZP_05744422.1| glutamine ABC superfamily ATP binding cassette transporter, permease protein [Lactobacillus iners DSM 13335] gi|302191507|ref|ZP_07267761.1| ABC-type amino acid transport system, permease component [Lactobacillus iners AB-1] gi|309806871|ref|ZP_07700858.1| putative glutamine ABC transporter, permease protein GlnM [Lactobacillus iners LactinV 03V1-b] gi|309809565|ref|ZP_07703423.1| putative glutamine ABC transporter, permease protein GlnM [Lactobacillus iners SPIN 2503V10-D] gi|259167038|gb|EEW51533.1| glutamine ABC superfamily ATP binding cassette transporter, permease protein [Lactobacillus iners DSM 13335] gi|308166737|gb|EFO68929.1| putative glutamine ABC transporter, permease protein GlnM [Lactobacillus iners LactinV 03V1-b] gi|308170237|gb|EFO72272.1| putative glutamine ABC transporter, permease protein GlnM [Lactobacillus iners SPIN 2503V10-D] Length = 212 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 57/169 (33%), Positives = 97/169 (57%), Gaps = 26/169 (15%) Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251 FS ++G++ +L R H + +Y+ F +P L+++ + Y + P + Sbjct: 29 FSLIIGVICALVEVSPCRIPH-----LIARIYVEIFR--NIPLLIIVMIFYLV---VPQM 78 Query: 252 G-QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 G + G T IAL+ YT+AFI+E V+SG+ ++ GQME A + G+++ +A Sbjct: 79 GLKLTGFGAGT---------IALTLYTSAFISETVKSGINSIGIGQMEGARSNGMSYVQA 129 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSS-LAVAVGF-----ADLVSVG 353 R V+LPQA++ +IPPL +Q+++L+KNSS LA GF AD++S+ Sbjct: 130 MRYVVLPQALKVVIPPLGNQFISLIKNSSVLAFVAGFDLMYQADVISLA 178 Score = 36.6 bits (83), Expect = 6.5, Method: Compositional matrix adjust. Identities = 18/58 (31%), Positives = 31/58 (53%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 G +T + + + IIG + +S ++ I R+YVE+FRNIP L+++ Y Sbjct: 15 GLSSTIMCSLIAIFFSLIIGVICALVEVSPCRIPHLIARIYVEIFRNIPLLIIVMIFY 72 >gi|255284108|ref|ZP_05348663.1| glutamine ABC transporter, permease protein [Bryantella formatexigens DSM 14469] gi|255265365|gb|EET58570.1| glutamine ABC transporter, permease protein [Bryantella formatexigens DSM 14469] Length = 230 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 62/228 (27%), Positives = 120/228 (52%), Gaps = 24/228 (10%) Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGK-----ALPLLYI 224 F+ + + T + T + VF+ ++GI + F + R ++KT K AL LY+ Sbjct: 13 FIADDRWKYLTNGLKTTLIVTVFAVLIGIAIG-FLVAVVRSTYDKTKKLKVLNALCKLYL 71 Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284 + +I G P +V + + Y + F GS + + +A + A++AEI Sbjct: 72 T--VIRGTPVVVQLLIIYFVIF------------GSVRIDKTIVAILAFGLNSGAYVAEI 117 Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344 +RSG++++ GQ EA +LG + + ++LPQA+++++P L ++++ LLK +S+A + Sbjct: 118 IRSGIMSIDNGQFEAGRSLGFNYVQTMIYIVLPQALKNVLPALGNEFIVLLKETSVAGYI 177 Query: 345 GFADLVSVGGTIINQTGQA----IEIILIWMFIYLSLSIMIALFMNRL 388 DL G I ++T A I + LI++ + L+ S ++++ RL Sbjct: 178 ALEDLTKGGDIIRSRTYDAFMPLIAVALIYLVMVLAFSKLLSILERRL 225 >gi|222082566|ref|YP_002541931.1| glutamine ABC transporter [Agrobacterium radiobacter K84] gi|221727245|gb|ACM30334.1| glutamine ABC transporter [Agrobacterium radiobacter K84] Length = 510 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 67/213 (31%), Positives = 110/213 (51%), Gaps = 24/213 (11%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 V ++G+VL++ SR LP I T + GLP +V I + Sbjct: 45 VLGVIIGMVLAVMGISQSRWLR------LPA-RIYTDIFRGLPAIVTIL----------I 87 Query: 251 LGQ-FNFIGGSTVSPEFMSL-YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308 +GQ F IG P L IALS A+I EI RSG+ +V RGQMEA AL +++ Sbjct: 88 IGQGFARIGRELFGPSPFPLGIIALSLIAGAYIGEIFRSGIQSVERGQMEACRALSMSYG 147 Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF----ADLVSVGGTIINQTGQAI 364 + RL+++PQ +R ++P L +Q++ +K+SSL +G ++ VG TG Sbjct: 148 QGMRLIVIPQGVRRVLPALVNQFIGNVKDSSLVYFLGLLASEREIFRVGQDQAVVTGNLS 207 Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 ++L +F YL +++ + F+N ++A++ L + Sbjct: 208 PLLLAGVF-YLLITVPLTHFVNYIDARLRLGRQ 239 >gi|160936156|ref|ZP_02083529.1| hypothetical protein CLOBOL_01052 [Clostridium bolteae ATCC BAA-613] gi|158440966|gb|EDP18690.1| hypothetical protein CLOBOL_01052 [Clostridium bolteae ATCC BAA-613] Length = 233 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 61/229 (26%), Positives = 119/229 (51%), Gaps = 24/229 (10%) Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGK-----ALPLLYI 224 F+++ + T + T I F+ ++GIVL F + R +EKT K A+ +Y+ Sbjct: 16 FVSDNRWKYLTEGLKTTLIITFFACLMGIVLG-FLVGMIRSTYEKTHKLKVLNAICKVYL 74 Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284 + +I G P +V + + Y + F GS + + +A + A++AEI Sbjct: 75 T--VIRGTPVVVQLLIIYFVVF------------GSVRVDKVIVAILAFGVNSGAYVAEI 120 Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344 RSG++++ GQMEA +LG + + +++PQA ++++P L +++++LLK +S++ + Sbjct: 121 FRSGIMSIDPGQMEAGRSLGFNYAQTMWYIIMPQAFKTVLPTLCNEFISLLKETSVSGYI 180 Query: 345 GFADLVSVGGTIINQTGQA----IEIILIWMFIYLSLSIMIALFMNRLN 389 DL G I ++T A I + +I++ I + + +I + RL Sbjct: 181 AIQDLTKGGDIIRSRTYSAFMPLIAVAIIYLIIVMIFTKLIQILERRLR 229 >gi|114766876|ref|ZP_01445798.1| ABC glutamate/glutamine/aspartate/asparagine transporter, inner membrane subunit BztC [Pelagibaca bermudensis HTCC2601] gi|114540922|gb|EAU43982.1| ABC glutamate/glutamine/aspartate/asparagine transporter, inner membrane subunit BztC [Roseovarius sp. HTCC2601] Length = 438 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 43/113 (38%), Positives = 69/113 (61%), Gaps = 8/113 (7%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I ++ +++A+IAE+VR GL A+P+GQ EAA ALGL + K+ RL++LPQA++ IP + + Sbjct: 309 IMVTLFSSAYIAEVVRGGLAALPKGQYEAADALGLDYWKSMRLIILPQALKISIPGIVNT 368 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 ++ L K+++L V +G D + + I T W IY L + I L Sbjct: 369 FIGLFKDTTLVVFIGLLDPIGLSNAIRASTD--------WNGIYWELFVFIGL 413 >gi|261213024|ref|ZP_05927308.1| amino acid ABC transporter permease protein [Vibrio sp. RC341] gi|260838089|gb|EEX64766.1| amino acid ABC transporter permease protein [Vibrio sp. RC341] Length = 265 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 53/159 (33%), Positives = 85/159 (53%), Gaps = 16/159 (10%) Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVS-PEFM 267 R H G+AL YI+ ++ P LV I L Y F+ G + F Sbjct: 89 RQSHSLVGRALGTGYIA--VVRNTPLLVQIYLLY-------------FVFGPVIGLDRFA 133 Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327 + +AL+ + A+ AE+ R GL ++P+GQ EAA +LGL+ V+LPQ ++ +PPL Sbjct: 134 TAVLALALFQGAYTAEVFRGGLNSIPQGQYEAAHSLGLSRFFTFYDVILPQLLQRTLPPL 193 Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 T++ ++L+KNSS+ + DL + G I+++T EI Sbjct: 194 TNEMVSLIKNSSIVSVMAIFDLTTQGRNIVSETAMPFEI 232 >gi|219667105|ref|YP_002457540.1| polar amino acid ABC transporter inner membrane subunit [Desulfitobacterium hafniense DCB-2] gi|219537365|gb|ACL19104.1| polar amino acid ABC transporter, inner membrane subunit [Desulfitobacterium hafniense DCB-2] Length = 195 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 38/87 (43%), Positives = 60/87 (68%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P F + + Y A+IAE+VR+G+ A+ RGQMEAA++ G ++ A R V+LPQA R + Sbjct: 63 PVFSVGVLGVGVYHGAYIAEVVRAGIQAIHRGQMEAALSQGFSYWGAMRHVILPQAARVV 122 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLV 350 +PPLT+Q ++L+KN+S+ + DL+ Sbjct: 123 LPPLTNQAVSLIKNTSVLAMIAGGDLM 149 >gi|91781168|ref|YP_556375.1| polar amino acid ABC transporter inner membrane protein [Burkholderia xenovorans LB400] gi|91693828|gb|ABE37025.1| amino acid ABC transporter membrane protein, PAAT family [Burkholderia xenovorans LB400] Length = 319 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 45/149 (30%), Positives = 89/149 (59%), Gaps = 3/149 (2%) Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308 PVL F+ ++P + + + L A++AEIVR+G++++ GQ EAA ALG+T Sbjct: 158 PVL--FHGSANDLITP-YTAALLGLGLNEGAYMAEIVRAGILSIDPGQQEAARALGMTPA 214 Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368 + R ++LPQA+R I+PP ++ + +LK +SL + +DL+ ++ ++T Q I +++ Sbjct: 215 RILRRIVLPQAIRIIVPPAGNETIGMLKTTSLVSVIALSDLLYSVESVSSRTFQTIPLLV 274 Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKEK 397 + YL ++ +++L +R+ + L + Sbjct: 275 VACIWYLVVTSVLSLLQSRIERHLCLTRR 303 Score = 43.9 bits (102), Expect = 0.045, Method: Compositional matrix adjust. Identities = 30/86 (34%), Positives = 46/86 (53%), Gaps = 3/86 (3%) Query: 86 ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145 A +L G T WL + M ++GTL+ R S+N ++ ++Y+ FR P LV + Sbjct: 78 AHVVLSGLGLTLWLTCAAMAIGIVLGTLLAVMRTSSNPFLSVPAQLYLWFFRGTPVLVQL 137 Query: 146 FFLYKSVLSVLPIPDHSIVLPFGMFL 171 F + L++L IP SI +PFG L Sbjct: 138 IFWFN--LAIL-IPQISIAIPFGPVL 160 >gi|84387892|ref|ZP_00990906.1| amino acid ABC transporter, permease protein [Vibrio splendidus 12B01] gi|84377238|gb|EAP94107.1| amino acid ABC transporter, permease protein [Vibrio splendidus 12B01] Length = 293 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 40/112 (35%), Positives = 69/112 (61%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I + ++A+IAE++R+GL +P+GQ EAA +LGL+ R V+ PQ + +I PPL Q Sbjct: 165 ICIGLLSSAYIAEVIRAGLEGIPKGQWEAADSLGLSALSKYRFVVGPQVLTAITPPLAGQ 224 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382 ++L+K++S+ + ++ VG + N +G EI LI F+Y +L ++ Sbjct: 225 AISLVKDTSIVSLISIQEMTFVGTEMANSSGLIFEIWLIVGFVYFALCFALS 276 >gi|256851769|ref|ZP_05557157.1| ABC transporter permease component [Lactobacillus jensenii 27-2-CHN] gi|260661514|ref|ZP_05862426.1| ABC transporter permease component [Lactobacillus jensenii 115-3-CHN] gi|282931983|ref|ZP_06337446.1| amino acid ABC transporter, permease protein [Lactobacillus jensenii 208-1] gi|297205391|ref|ZP_06922787.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus jensenii JV-V16] gi|256615727|gb|EEU20916.1| ABC transporter permease component [Lactobacillus jensenii 27-2-CHN] gi|260547571|gb|EEX23549.1| ABC transporter permease component [Lactobacillus jensenii 115-3-CHN] gi|281303889|gb|EFA96028.1| amino acid ABC transporter, permease protein [Lactobacillus jensenii 208-1] gi|297149969|gb|EFH30266.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus jensenii JV-V16] Length = 534 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 41/122 (33%), Positives = 78/122 (63%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I +S T A++AE++R G++A P+GQ EAA ALG++H + ++LPQA+++ +P +T++ Sbjct: 388 IIVSINTGAYLAEVIRGGIMATPKGQFEAASALGMSHNQRMWNIILPQAIKNCLPSITNE 447 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++ +K++S+ + ++L VG TI +Q+ + + L+ IYL L+ I N + Sbjct: 448 FIVNIKDTSVLSIISVSELFFVGSTIASQSFEFFQTYLMISAIYLMLTFSITRIFNLIEK 507 Query: 391 KI 392 K+ Sbjct: 508 KL 509 >gi|107026631|ref|YP_624142.1| glutamine ABC transporter permease protein [Burkholderia cenocepacia AU 1054] gi|116692179|ref|YP_837712.1| glutamine ABC transporter permease protein [Burkholderia cenocepacia HI2424] gi|105896005|gb|ABF79169.1| L-glutamine ABC transporter membrane protein [Burkholderia cenocepacia AU 1054] gi|116650179|gb|ABK10819.1| L-glutamine ABC transporter membrane protein [Burkholderia cenocepacia HI2424] Length = 235 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 59/189 (31%), Positives = 97/189 (51%), Gaps = 17/189 (8%) Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249 V F++G++ +F R + K L +YI LI G P +V + L+F P Sbjct: 47 LVGGFIVGMIAGMF-----RAYGPKAMNVLAQVYIE--LIRGTPIVVQVMF---LYFALP 96 Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309 +L G + IA++ + A++AE+VR L+++P+G EA +A+GL+ + Sbjct: 97 LLAHIRIDG-------LTAAIIAITVNSGAYLAEVVRGALLSIPKGLTEAGLAMGLSMPR 149 Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369 ++ P A R +IPPL +Q + LK++SL + +G +L G II QA+EI Sbjct: 150 VLLKIVGPLAFRRLIPPLGNQCIVSLKDTSLFIVIGVGELTRKGQEIIAGNFQAVEIWSA 209 Query: 370 WMFIYLSLS 378 IYL L+ Sbjct: 210 VAVIYLILT 218 >gi|311742427|ref|ZP_07716236.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Aeromicrobium marinum DSM 15272] gi|311314055|gb|EFQ83963.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Aeromicrobium marinum DSM 15272] Length = 215 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 49/117 (41%), Positives = 67/117 (57%), Gaps = 13/117 (11%) Query: 233 PTLVLIALKYQLHFDKPVLG-QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291 P LVLI L Y + P +G F F G T +A+ YTAAF+ E +RSG+ Sbjct: 62 PLLVLILLTY---YGLPRVGIDFGFFGNIT---------LAMGVYTAAFVCEAIRSGING 109 Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348 VP GQ EAA A+G+ V+LPQA+R ++PP+ S ++ L KN+SLA G A+ Sbjct: 110 VPIGQAEAARAIGMPFATTMSQVVLPQAVRLVVPPMASVFIALTKNTSLAATFGIAE 166 Score = 38.5 bits (88), Expect = 1.9, Method: Compositional matrix adjust. Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 8/69 (11%) Query: 89 ILVGFVNTFWLAFSGMIPAT--------IIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140 +L+ V+ FWL F+ + ++G L+G R+S ++ + VYV +FRN P Sbjct: 3 VLIDNVDQFWLGFTETVKLLLASSALALVVGVLIGVARVSPVSVLRRLGSVYVVLFRNTP 62 Query: 141 PLVVIFFLY 149 LV+I Y Sbjct: 63 LLVLILLTY 71 >gi|163789522|ref|ZP_02183960.1| glutamine ABC transporter, permease/substrate-binding protein [Carnobacterium sp. AT7] gi|159875054|gb|EDP69120.1| glutamine ABC transporter, permease/substrate-binding protein [Carnobacterium sp. AT7] Length = 484 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 63/204 (30%), Positives = 112/204 (54%), Gaps = 17/204 (8%) Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249 F + V+G++L LF+ + + LY++ ++ G+P LI L + ++F P Sbjct: 296 FAIALVVGVILGLFSATSNNLL-----SGISTLYVT--IMRGIP---LIVLAFFVYFSIP 345 Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309 QF I S +++ I LS T+A+I+E+VR G+ AV GQ+EAA +LGL ++ Sbjct: 346 ---QFLNIQLSA----YLAGVITLSLNTSAYISELVRGGIQAVAGGQLEAARSLGLPYKT 398 Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369 + R ++LPQA++ +IP +Q++ LK++S+ +G +L G II +T + + LI Sbjct: 399 SMRKIVLPQAIKIMIPSFINQFVITLKDTSILSVIGIVELTQTGKIIIARTYSSGNMWLI 458 Query: 370 WMFIYLSLSIMIALFMNRLNAKIA 393 +Y+ L ++ L K+A Sbjct: 459 IGIMYIVLITILTKLSTVLERKMA 482 Score = 37.4 bits (85), Expect = 3.9, Method: Compositional matrix adjust. Identities = 27/94 (28%), Positives = 45/94 (47%), Gaps = 14/94 (14%) Query: 79 YTSDSSYA--------------TAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKL 124 YTS++S A + +L G T L A ++G ++G ++N L Sbjct: 257 YTSENSEAATSNNFFTLIQNNYSELLTGLGRTLVLTLVSFAIALVVGVILGLFSATSNNL 316 Query: 125 VAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPI 158 ++ I +YV + R IP +V+ FF+Y S+ L I Sbjct: 317 LSGISTLYVTIMRGIPLIVLAFFVYFSIPQFLNI 350 >gi|242372074|ref|ZP_04817648.1| ABC superfamily ATP binding cassette transporter, membrane protein [Staphylococcus epidermidis M23864:W1] gi|242350186|gb|EES41787.1| ABC superfamily ATP binding cassette transporter, membrane protein [Staphylococcus epidermidis M23864:W1] Length = 239 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 51/155 (32%), Positives = 95/155 (61%), Gaps = 10/155 (6%) Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248 I + +F+LG++++LF T L R K + + +Y+S +I G P +V + + + + Sbjct: 34 ITIVTFILGLIIALF-TALMRISTSKILRGIARVYVS--IIRGTPMIVQL---FIIFYGI 87 Query: 249 PVLGQF---NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305 P LG+ + T++P ++ I LS A+ +EI+R G+I++P+GQ EAA ++G+ Sbjct: 88 PELGRLITNDADNQWTLAPVVAAI-IGLSFNVGAYASEIIRGGIISIPKGQTEAAYSIGM 146 Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340 +R+ + ++LPQA+R IP L + +L L+K++SL Sbjct: 147 NYRQTVQRIILPQAIRVSIPALGNTFLGLIKDTSL 181 >gi|46578523|ref|YP_009331.1| glutamine ABC transporter permease [Desulfovibrio vulgaris str. Hildenborough] gi|120603894|ref|YP_968294.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio vulgaris DP4] gi|46447934|gb|AAS94590.1| glutamine ABC transporter, permease protein [Desulfovibrio vulgaris str. Hildenborough] gi|120564123|gb|ABM29867.1| amino acid ABC transporter membrane protein, PAAT family [Desulfovibrio vulgaris DP4] gi|311232450|gb|ADP85304.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio vulgaris RCH1] Length = 223 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 46/140 (32%), Positives = 79/140 (56%), Gaps = 1/140 (0%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G + PE + +A++ + A+IAEIVR + ++ GQ EA ++GLT + ++ PQ Sbjct: 85 GMRIPPETAGI-LAIAVNSGAYIAEIVRGAIASIDTGQSEAGRSIGLTRLQTMLYIIWPQ 143 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378 A R +IPPL +Q++ LK++SL V +G +L G II +A E+ L YL+++ Sbjct: 144 AFRRMIPPLGNQFIISLKDTSLLVVIGVGELTRQGQEIIAVNFRAFEVWLTVAVFYLAMT 203 Query: 379 IMIALFMNRLNAKIALKEKK 398 + IA + RL + + + Sbjct: 204 LSIAWALRRLERSFSARSAR 223 >gi|68535882|ref|YP_250587.1| putative ABC transport system, permease protein [Corynebacterium jeikeium K411] gi|68263481|emb|CAI36969.1| putative ABC transport system, permease protein [Corynebacterium jeikeium K411] Length = 315 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 47/126 (37%), Positives = 77/126 (61%), Gaps = 4/126 (3%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+ + L AA++AEIVR+G+ AVP GQ EA+ ALG+T + R ++PQAMR IIP Sbjct: 152 FILAVLGLGLNEAAYMAEIVRAGIQAVPEGQSEASKALGMTWGQNMRRTVMPQAMRIIIP 211 Query: 326 PLTSQYLNLLKNSSLAVAVGF-ADLVSVGGTIINQTGQAIEIILI---WMFIYLSLSIMI 381 P +++++LLK +SL +AV + A+L I N Q + ++L+ W + S+ ++ Sbjct: 212 PTGNEFISLLKTTSLVIAVPYTAELYGRATDISNSLFQPVPLLLVAATWYLVITSILMVG 271 Query: 382 ALFMNR 387 ++ R Sbjct: 272 QFYVER 277 >gi|107103710|ref|ZP_01367628.1| hypothetical protein PaerPA_01004781 [Pseudomonas aeruginosa PACS2] gi|218889478|ref|YP_002438342.1| putative permease of ABC transporter [Pseudomonas aeruginosa LESB58] gi|254237068|ref|ZP_04930391.1| hypothetical protein PACG_03105 [Pseudomonas aeruginosa C3719] gi|254242875|ref|ZP_04936197.1| hypothetical protein PA2G_03644 [Pseudomonas aeruginosa 2192] gi|126168999|gb|EAZ54510.1| hypothetical protein PACG_03105 [Pseudomonas aeruginosa C3719] gi|126196253|gb|EAZ60316.1| hypothetical protein PA2G_03644 [Pseudomonas aeruginosa 2192] gi|218769701|emb|CAW25461.1| probable permease of ABC transporter [Pseudomonas aeruginosa LESB58] Length = 234 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 46/133 (34%), Positives = 81/133 (60%), Gaps = 10/133 (7%) Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286 F++ G+P L++I Y F + GQ + +F ++ +AL + A ++AEIVR Sbjct: 68 FVVRGVPLLMVIFWAY--FFLPTLTGQ--------RTDQFTTMLLALVLFDAVYLAEIVR 117 Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346 +G+ + RGQ EAA +LGL + + RLV+LPQA+R+++P L +Q+++ +K +SL +G Sbjct: 118 AGIQGLDRGQFEAARSLGLGYLASMRLVILPQALRNMLPSLVNQFVSTIKETSLGYIIGL 177 Query: 347 ADLVSVGGTIINQ 359 A++ + I Q Sbjct: 178 AEVSFIASQINTQ 190 >gi|307729014|ref|YP_003906238.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia sp. CCGE1003] gi|307583549|gb|ADN56947.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. CCGE1003] Length = 245 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 47/124 (37%), Positives = 70/124 (56%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 ++L YT + I E VR+G+ A P GQ AA ALGLT +A R VLLP R+I+ PLTS+ Sbjct: 116 VSLGVYTGSRICEQVRAGIQARPVGQFHAAFALGLTRAQAYRHVLLPVTFRTILGPLTSE 175 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 +L + KNS++A +G +L +++ T Q E + Y+ L+ I M + Sbjct: 176 FLIISKNSAVASTIGLLELSGEARQLVDYTAQPYESFICVTLAYVGLNFAILRGMRWVRR 235 Query: 391 KIAL 394 + AL Sbjct: 236 RTAL 239 >gi|42518678|ref|NP_964608.1| glutamine ABC transporter permease component [Lactobacillus johnsonii NCC 533] gi|41582964|gb|AAS08574.1| glutamine ABC transporter permease component [Lactobacillus johnsonii NCC 533] Length = 216 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 67/205 (32%), Positives = 100/205 (48%), Gaps = 34/205 (16%) Query: 193 SFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPTLVLIALKYQLHF 246 SFVLG+VL ++ G + LPLL I F FGLP L Sbjct: 34 SFVLGLVLGFIRYVKIKYLSAIVGFVIDIIRNLPLLLIIFFTYFGLPEL----------- 82 Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306 G +P S+ IAL + A +AEIVRSG+ AV GQME A + G+T Sbjct: 83 ------------GIITNPTVASI-IALVVFEGAMLAEIVRSGIAAVDPGQMEGARSNGMT 129 Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 + +A V++PQA+ +IP L SQ+++L+K++SLA + +L+ I +Q Sbjct: 130 YMQAMYHVIIPQALNKMIPSLLSQFVSLVKDTSLATIIVLPELLFHAQIIYSQNTTY--- 186 Query: 367 ILIWMFIYLSLSIMIALFMNRLNAK 391 LI M++ +++ I F + AK Sbjct: 187 -LIPMYVIIAIMYFIVCFSLSMVAK 210 >gi|329295877|ref|ZP_08253213.1| glutamine ABC transporter permease protein [Plautia stali symbiont] Length = 219 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 40/129 (31%), Positives = 80/129 (62%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + + + + A+IAEI R ++++ +G EA +ALGL+ R+ R V++P A+R ++P Sbjct: 90 FTAAVVTIMINSGAYIAEITRGAVLSINKGFREAGLALGLSRRETLRYVIMPLALRRMLP 149 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PL +Q++ +K++SL + +G A+L G II +A+EI IYL ++++++ + Sbjct: 150 PLGNQWIVSIKDTSLFIVIGVAELTRQGQEIIAGNFRALEIWSAVAIIYLVITLVLSFVL 209 Query: 386 NRLNAKIAL 394 R+ ++ + Sbjct: 210 RRIEKRVKI 218 >gi|228922903|ref|ZP_04086200.1| Arginine transport system permease protein artQ [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228836759|gb|EEM82103.1| Arginine transport system permease protein artQ [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 225 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 53/206 (25%), Positives = 105/206 (50%), Gaps = 29/206 (14%) Query: 193 SFVLGIVLSLF------ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246 F+LG +L+L A ++ F+ + PL+ + FG+P ++ Y++ Sbjct: 39 GFILGTLLALCKIVRIRALNIAADFYTSIFRGTPLVLQLMIIYFGVPQII----GYEI-- 92 Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306 P F++ +A S + A+++E++R+G+ AV +GQ EAA+ALG+ Sbjct: 93 -----------------PAFLAAVLAFSLNSGAYMSEVIRAGIQAVDKGQTEAAMALGIP 135 Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 + K R ++ PQA+++I+P L +++ L K S++ +G DL+ + +T + +E Sbjct: 136 YGKMMRNIIFPQALKNILPALVNEFATLTKESAVVTVIGATDLMRRAYIVGGETFKYLEP 195 Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKI 392 +L IY L I++ L + ++ Sbjct: 196 LLFVGLIYYMLVIILTLVGKAIEGRM 221 >gi|228954439|ref|ZP_04116464.1| Arginine transport system permease protein artQ [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228974247|ref|ZP_04134817.1| Arginine transport system permease protein artQ [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228980838|ref|ZP_04141143.1| Arginine transport system permease protein artQ [Bacillus thuringiensis Bt407] gi|229180433|ref|ZP_04307776.1| Arginine transport system permease protein artQ [Bacillus cereus 172560W] gi|228603180|gb|EEK60658.1| Arginine transport system permease protein artQ [Bacillus cereus 172560W] gi|228779007|gb|EEM27269.1| Arginine transport system permease protein artQ [Bacillus thuringiensis Bt407] gi|228785587|gb|EEM33596.1| Arginine transport system permease protein artQ [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228805096|gb|EEM51690.1| Arginine transport system permease protein artQ [Bacillus thuringiensis serovar kurstaki str. T03a001] Length = 225 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 53/206 (25%), Positives = 105/206 (50%), Gaps = 29/206 (14%) Query: 193 SFVLGIVLSLF------ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246 F+LG +L+L A ++ F+ + PL+ + FG+P ++ Y++ Sbjct: 39 GFILGTLLALCKIARIRALNIAADFYTSIFRGTPLVLQLMIIYFGVPQII----GYEI-- 92 Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306 P F++ +A S + A+++E++R+G+ AV +GQ EAA+ALG+ Sbjct: 93 -----------------PAFLAAVLAFSLNSGAYMSEVIRAGIQAVDKGQTEAAMALGIP 135 Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 + K R ++ PQA+++I+P L +++ L K S++ +G DL+ + +T + +E Sbjct: 136 YGKMMRNIIFPQALKNILPALVNEFATLTKESAVVTVIGATDLMRRAYIVGGETFKYLEP 195 Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKI 392 +L IY L I++ L + ++ Sbjct: 196 LLFVGLIYYMLVIILTLVGKAIEGRM 221 >gi|325068922|ref|ZP_08127595.1| polar amino acid ABC transporter inner membrane subunit [Actinomyces oris K20] Length = 321 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 51/136 (37%), Positives = 82/136 (60%), Gaps = 4/136 (2%) Query: 260 STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319 +TV F++ + L A+++EIVRSGL +V +GQ EAA ALG++ + R ++LPQA Sbjct: 148 TTVFTPFVAAVLGLGINEGAYLSEIVRSGLNSVDKGQSEAAGALGMSRGQILRRIVLPQA 207 Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFA-DLVSVGGTIINQTGQAIEIIL---IWMFIYL 375 MR I+PP ++ +++LK +SL +AV F DL V + + T Q I ++L IW I Sbjct: 208 MRVIVPPTGNETISMLKTTSLVLAVPFTLDLTFVTNSYASLTYQIIPLLLVAAIWYIIIT 267 Query: 376 SLSIMIALFMNRLNAK 391 S+ ++ ++ R K Sbjct: 268 SILMVGQHYIERYYGK 283 >gi|306818522|ref|ZP_07452245.1| L-cystine ABC superfamily ATP binding cassette transporter, membrane protein [Mobiluncus mulieris ATCC 35239] gi|307701066|ref|ZP_07638091.1| ABC transporter, permease protein [Mobiluncus mulieris FB024-16] gi|304648695|gb|EFM45997.1| L-cystine ABC superfamily ATP binding cassette transporter, membrane protein [Mobiluncus mulieris ATCC 35239] gi|307614061|gb|EFN93305.1| ABC transporter, permease protein [Mobiluncus mulieris FB024-16] Length = 217 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 42/140 (30%), Positives = 81/140 (57%), Gaps = 3/140 (2%) Query: 256 FIGGSTVSPE--FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313 ++ G +S E F ++ IA + AA+ AEI R G A+P GQ EAA LG + R+ Sbjct: 75 YLFGVQISAEYRFYAVIIAFAINYAAYFAEIYRGGFQAIPAGQSEAAFVLGYSQRRTFFT 134 Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI 373 + +PQ R+++P +T++ + L+K++SLA A+ + ++ ++ + T + +F Sbjct: 135 IKVPQMFRTVLPSITNEVITLVKDTSLAFAISYTEMFTLAKQYASSTASMAPFVAAAVFY 194 Query: 374 YLSLSIMIALFMNRLNAKIA 393 Y+ +I++A+ M+RL ++ Sbjct: 195 YV-FNIVVAVLMDRLEKHVS 213 >gi|227894251|ref|ZP_04012056.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus ultunensis DSM 16047] gi|227863971|gb|EEJ71392.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus ultunensis DSM 16047] Length = 494 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 64/200 (32%), Positives = 103/200 (51%), Gaps = 18/200 (9%) Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248 I VFS ++GIVL + L R K + + YI I G P +V I Y Sbjct: 301 ITVFSVLIGIVLGMLLA-LMRLSQNKLLHWIAVCYIE--FIRGTPQMVQILFVY------ 351 Query: 249 PVLGQFNFIGGSTVS--PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306 F G +S ++ IA+ + A++AE +RSG+ +V +GQ EAA +LGL+ Sbjct: 352 -------FGIGVLISNLSALVAGIIAIGLNSGAYVAEDIRSGISSVAKGQTEAARSLGLS 404 Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 KA R V++PQA+++I P L ++++ LLK+SSL +G +L+ I T + + Sbjct: 405 QAKAYRYVIIPQALKNIWPALGNEFITLLKDSSLVSVIGVTELMYQTELIQTSTYRGVLP 464 Query: 367 ILIWMFIYLSLSIMIALFMN 386 + I M IY ++ + +N Sbjct: 465 LFIAMIIYFIMTFTLTRLLN 484 Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust. Identities = 30/106 (28%), Positives = 49/106 (46%), Gaps = 3/106 (2%) Query: 44 CVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSG 103 VN N++EK L + +L E A + + + + Y + G T + Sbjct: 249 AVNKTINHVEKKKL-IDKEYLPEAAKYM--KTAKKTNTMAKYVPYFIKGVGYTIVITVFS 305 Query: 104 MIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 ++ ++G L+ RLS NKL+ WI Y+E R P +V I F+Y Sbjct: 306 VLIGIVLGMLLALMRLSQNKLLHWIAVCYIEFIRGTPQMVQILFVY 351 >gi|170016703|ref|YP_001727622.1| amino acid ABC transporter periplasmic protein [Leuconostoc citreum KM20] gi|169803560|gb|ACA82178.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Leuconostoc citreum KM20] Length = 482 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 49/159 (30%), Positives = 79/159 (49%), Gaps = 23/159 (14%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 + LPL+ ++ F+ GLP ++ T P F + + L Sbjct: 328 RGLPLMVLAFFIYIGLPGVI-----------------------GTKIPAFTAGLLTLILN 364 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 A+ A VR G AV RGQMEAA +LGL + K+ R V++PQ ++ +IP +Q++ LK Sbjct: 365 EGAYTAAFVRGGFEAVDRGQMEAARSLGLPYSKSMRRVIMPQGLKIMIPSFINQFIITLK 424 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375 ++S+ A+G +L G I+++ Q + I IYL Sbjct: 425 DTSILSAIGILELTQTGSLIVSRNSQGFRVWAIVAVIYL 463 >gi|228902666|ref|ZP_04066816.1| Arginine transport system permease protein artQ [Bacillus thuringiensis IBL 4222] gi|228941315|ref|ZP_04103868.1| Arginine transport system permease protein artQ [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228967196|ref|ZP_04128232.1| Arginine transport system permease protein artQ [Bacillus thuringiensis serovar sotto str. T04001] gi|229071660|ref|ZP_04204877.1| Arginine transport system permease protein artQ [Bacillus cereus F65185] gi|229081412|ref|ZP_04213914.1| Arginine transport system permease protein artQ [Bacillus cereus Rock4-2] gi|229152355|ref|ZP_04280547.1| Arginine transport system permease protein artQ [Bacillus cereus m1550] gi|229192365|ref|ZP_04319329.1| Arginine transport system permease protein artQ [Bacillus cereus ATCC 10876] gi|228591145|gb|EEK49000.1| Arginine transport system permease protein artQ [Bacillus cereus ATCC 10876] gi|228630963|gb|EEK87600.1| Arginine transport system permease protein artQ [Bacillus cereus m1550] gi|228701902|gb|EEL54386.1| Arginine transport system permease protein artQ [Bacillus cereus Rock4-2] gi|228711455|gb|EEL63413.1| Arginine transport system permease protein artQ [Bacillus cereus F65185] gi|228792565|gb|EEM40131.1| Arginine transport system permease protein artQ [Bacillus thuringiensis serovar sotto str. T04001] gi|228818474|gb|EEM64546.1| Arginine transport system permease protein artQ [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228856981|gb|EEN01491.1| Arginine transport system permease protein artQ [Bacillus thuringiensis IBL 4222] Length = 222 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 53/206 (25%), Positives = 105/206 (50%), Gaps = 29/206 (14%) Query: 193 SFVLGIVLSLF------ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246 F+LG +L+L A ++ F+ + PL+ + FG+P ++ Y++ Sbjct: 36 GFILGTLLALCKIARIRALNIAADFYTSIFRGTPLVLQLMIIYFGVPQII----GYEI-- 89 Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306 P F++ +A S + A+++E++R+G+ AV +GQ EAA+ALG+ Sbjct: 90 -----------------PAFLAAVLAFSLNSGAYMSEVIRAGIQAVDKGQTEAAMALGIP 132 Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 + K R ++ PQA+++I+P L +++ L K S++ +G DL+ + +T + +E Sbjct: 133 YGKMMRNIIFPQALKNILPALVNEFATLTKESAVVTVIGATDLMRRAYIVGGETFKYLEP 192 Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKI 392 +L IY L I++ L + ++ Sbjct: 193 LLFVGLIYYMLVIILTLVGKAIEGRM 218 >gi|218676306|ref|YP_002395125.1| ABC transporter: Transmembrane protein [Vibrio splendidus LGP32] gi|218324574|emb|CAV26091.1| ABC transporter: Transmembrane protein [Vibrio splendidus LGP32] Length = 308 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 40/112 (35%), Positives = 69/112 (61%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I + ++A+IAE++R+GL +P+GQ EAA +LGL+ R V+ PQ + +I PPL Q Sbjct: 180 ICIGLLSSAYIAEVIRAGLEGIPKGQWEAADSLGLSALSKYRFVVGPQVLTAITPPLAGQ 239 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382 ++L+K++S+ + ++ VG + N +G EI LI F+Y +L ++ Sbjct: 240 AISLVKDTSIVSLISIQEMTFVGTEMANSSGLIFEIWLIVGFVYFALCFALS 291 >gi|167836531|ref|ZP_02463414.1| amino acid ABC transporter, permease protein [Burkholderia thailandensis MSMB43] Length = 194 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 43/133 (32%), Positives = 79/133 (59%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+S +AL+ T A+ +EI+R+GL AVP GQ EA+ A+GL+ RL+++PQ +R IP Sbjct: 61 FLSSVLALAWCTGAYTSEIIRAGLQAVPHGQREASYAIGLSEVDTLRLIIVPQGLRVSIP 120 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PL + +L+ +SL V +LV+ I N+T + ++++ +Y ++ + L + Sbjct: 121 PLLGFGVIMLQTTSLCFTVALPELVTKAQQIGNETFLYMPVLILAALLYTAICVPSTLLV 180 Query: 386 NRLNAKIALKEKK 398 + L +++ E + Sbjct: 181 SSLERRLSRHEAR 193 >gi|84394263|ref|ZP_00992989.1| ABC-type amino acid transport system, permease component [Vibrio splendidus 12B01] gi|84375102|gb|EAP92023.1| ABC-type amino acid transport system, permease component [Vibrio splendidus 12B01] Length = 365 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 34/83 (40%), Positives = 61/83 (73%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + + ++AA++AE++R GL A+P+GQ EAA ALGL++ K T L++LPQA++ IP + + Sbjct: 235 VGVVLFSAAYMAEVIRGGLQAIPKGQYEAADALGLSYWKKTGLIILPQALKITIPSIVNT 294 Query: 331 YLNLLKNSSLAVAVGFADLVSVG 353 ++ L K++SL + +G D++ +G Sbjct: 295 FIGLFKDTSLVLIIGMFDVLGIG 317 >gi|296132383|ref|YP_003639630.1| polar amino acid ABC transporter, inner membrane subunit [Thermincola sp. JR] gi|296030961|gb|ADG81729.1| polar amino acid ABC transporter, inner membrane subunit [Thermincola potens JR] Length = 220 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 42/119 (35%), Positives = 71/119 (59%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P F + L A+I+EI+R+ ++A+ GQ EAA+ALGLT + R V+ PQA+R Sbjct: 86 PAFTAAVTGLGLNGGAYISEIIRAAVLAIDPGQQEAALALGLTRLQTLRYVIFPQAVRIA 145 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382 +PPL + + ++LK SSL + ++ +G I +T +A E+ L+ IY L+ +++ Sbjct: 146 VPPLMNTFSSMLKESSLVSVLAICEISRLGQLIYTRTFRAFEVYLVVGAIYFCLTFLVS 204 >gi|228983609|ref|ZP_04143813.1| Amino acid ABC transproter, permease [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228776094|gb|EEM24456.1| Amino acid ABC transproter, permease [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 225 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 51/131 (38%), Positives = 77/131 (58%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + IAL+ + A+I EI R + +V RGQMEAA +LG+ + A R ++LPQA R IP Sbjct: 79 FWAGAIALAIHNGAYITEIFRGSIQSVDRGQMEAARSLGMPYPLAMRRIVLPQAFRQSIP 138 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PL +Q++ LK+SSL VG ++L G +I Q ++ +I YL L ++ F+ Sbjct: 139 PLGNQFIIGLKDSSLVAYVGLSELWGSGLSIAAGNFQQLDTYMIVGLYYLVLVLLFTYFV 198 Query: 386 NRLNAKIALKE 396 N L ++ KE Sbjct: 199 NLLEKRLQRKE 209 >gi|170697812|ref|ZP_02888898.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria IOP40-10] gi|170137314|gb|EDT05556.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria IOP40-10] Length = 218 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 59/189 (31%), Positives = 97/189 (51%), Gaps = 17/189 (8%) Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249 V F++G++ +F R + K L +YI LI G P +V + L+F P Sbjct: 30 LVGGFIVGMIAGMF-----RAYGPKAMNVLAQVYIE--LIRGTPIVVQVMF---LYFALP 79 Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309 +L G + IA++ + A++AE+VR L+++P+G EA +A+GL+ + Sbjct: 80 LLAHIRIDG-------LTAAIIAITVNSGAYLAEVVRGALLSIPKGLTEAGLAMGLSMPR 132 Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369 ++ P A R +IPPL +Q + LK++SL + +G +L G II QA+EI Sbjct: 133 VLLKIVGPLAFRRLIPPLGNQCIVSLKDTSLFIVIGVGELTRKGQEIIAGNFQAVEIWSA 192 Query: 370 WMFIYLSLS 378 IYL L+ Sbjct: 193 VAIIYLILT 201 >gi|145223751|ref|YP_001134429.1| polar amino acid ABC transporter, inner membrane subunit [Mycobacterium gilvum PYR-GCK] gi|315444078|ref|YP_004076957.1| amino acid ABC transporter membrane protein, PAAT family ;amino acid ABC transporter substrate-binding protein, PAAT family [Mycobacterium sp. Spyr1] gi|145216237|gb|ABP45641.1| amino acid ABC transporter membrane protein, PAAT family / amino acid ABC transporter substrate-binding protein, PAAT family [Mycobacterium gilvum PYR-GCK] gi|315262381|gb|ADT99122.1| amino acid ABC transporter membrane protein, PAAT family ;amino acid ABC transporter substrate-binding protein, PAAT family [Mycobacterium sp. Spyr1] Length = 493 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 63/209 (30%), Positives = 106/209 (50%), Gaps = 33/209 (15%) Query: 192 FSFVLGIVLSLFATRLSRHFHEKT-G-------KALPLLYISTFLIFGLPTLVLIALKYQ 243 F+ +LG++ L R+SR + G + PLL + F+ FG+P + +Q Sbjct: 308 FALILGVIFGL--ARVSRSIWLRAIGTTFVDIFRGTPLLVQAFFIYFGIPA----TMGFQ 361 Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 + S V+ I LS A++ EIVR G+++V +GQMEAA +L Sbjct: 362 M---------------SAVTAGI----ITLSLNAGAYMTEIVRGGILSVDKGQMEAARSL 402 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363 G+ + R V+LPQA+R++IP +Q++ LK++S+ +G A+L G II +A Sbjct: 403 GIGYLPTMRKVILPQAIRTMIPSYINQFVITLKDTSILSVLGIAELTQSGRIIIAGNYKA 462 Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392 E+ LI IY + + + +RL ++ Sbjct: 463 FEMWLIVGVIYFIVIMALTKLSDRLERRL 491 >gi|86750027|ref|YP_486523.1| polar amino acid ABC transporter, inner membrane subunit [Rhodopseudomonas palustris HaA2] gi|86573055|gb|ABD07612.1| polar amino acid ABC transporter, inner membrane subunit [Rhodopseudomonas palustris HaA2] Length = 501 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 41/96 (42%), Positives = 62/96 (64%) Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315 F+ G+ M + I ++ + A+ AE+VR GL A+PRGQ EAA ALGL++ K T L++ Sbjct: 354 FLPGNFTIDGLMRVLIGVALFAGAYNAEVVRGGLNAIPRGQAEAASALGLSYAKTTGLIV 413 Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 LPQA+R +IP L + ++ L K++SL V DL+ Sbjct: 414 LPQALRHVIPGLVNSFIALFKDTSLVSIVALFDLLG 449 >gi|229820932|ref|YP_002882458.1| polar amino acid ABC transporter, inner membrane subunit [Beutenbergia cavernae DSM 12333] gi|229566845|gb|ACQ80696.1| polar amino acid ABC transporter, inner membrane subunit [Beutenbergia cavernae DSM 12333] Length = 294 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 42/122 (34%), Positives = 76/122 (62%) Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 L+ Y A IAE+VRSG+ +PRGQ EAA A+G+TH ++ R+V LPQA+ +++P L SQ+ Sbjct: 147 GLTLYNGAVIAELVRSGVFGLPRGQKEAAYAVGMTHGQSLRVVELPQALLAMLPSLVSQF 206 Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 + +LK+S+L V + +L+ + G ++ +L I++ ++ ++ L ++ Sbjct: 207 VVILKDSALGSWVTYGELLQFSRQLGTSDGNLLQTLLTAAVIFIVINYVLTRAAQYLASR 266 Query: 392 IA 393 I+ Sbjct: 267 IS 268 Score = 43.5 bits (101), Expect = 0.063, Method: Compositional matrix adjust. Identities = 27/86 (31%), Positives = 42/86 (48%), Gaps = 1/86 (1%) Query: 64 LSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK 123 L E+ + D+ + P + S+ L G NT A ++ A G L G GRL+ Sbjct: 41 LGEKGQLDPDKWL-PLFTSRSWLNFFLPGLQNTLVAALYAIVLALAFGLLFGLGRLAPLA 99 Query: 124 LVAWICRVYVEVFRNIPPLVVIFFLY 149 V W+C VE FR +P L+++ +Y Sbjct: 100 PVRWVCGTVVEFFRAVPVLMMMIVIY 125 >gi|91763206|ref|ZP_01265170.1| ABC transporter permease component [Candidatus Pelagibacter ubique HTCC1002] gi|91717619|gb|EAS84270.1| ABC transporter permease component [Candidatus Pelagibacter ubique HTCC1002] Length = 246 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 52/150 (34%), Positives = 83/150 (55%), Gaps = 23/150 (15%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 +A+PLL + ++ +GLP + G + SP F+S IAL+ Sbjct: 88 RAIPLLVLILWIYYGLPIMT----------------------GLSFSP-FVSGIIALAIS 124 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 +AF AEI R+G+ ++ + Q EA +LGLT K RLV+LPQA+++I+P L +Q++ +LK Sbjct: 125 ESAFQAEIFRAGINSIKKSQWEAGSSLGLTFYKRLRLVILPQAIKNILPALGNQFVYVLK 184 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 SSL +G DL ++ T + +EI Sbjct: 185 MSSLVSIIGIGDLTRKANELVVSTYRPLEI 214 >gi|86148622|ref|ZP_01066904.1| ABC-type amino acid transport system, permease component [Vibrio sp. MED222] gi|218709392|ref|YP_002417013.1| ABC transporter transmembrane protein [Vibrio splendidus LGP32] gi|85833578|gb|EAQ51754.1| ABC-type amino acid transport system, permease component [Vibrio sp. MED222] gi|218322411|emb|CAV18564.1| ABC transporter: Transmembrane protein [Vibrio splendidus LGP32] Length = 365 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 34/78 (43%), Positives = 59/78 (75%) Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335 ++AA++AE++R GL A+P+GQ EAA ALGL++ K T L++LPQA++ IP + + ++ L Sbjct: 240 FSAAYMAEVIRGGLQAIPKGQYEAADALGLSYWKKTGLIILPQALKITIPSIVNTFIGLF 299 Query: 336 KNSSLAVAVGFADLVSVG 353 K++SL + +G D++ +G Sbjct: 300 KDTSLVLIIGMFDVLGIG 317 >gi|300690823|ref|YP_003751818.1| amino acid transmembrane abc transporter protein [Ralstonia solanacearum PSI07] gi|299077883|emb|CBJ50522.1| putative amino acid transmembrane abc transporter protein [Ralstonia solanacearum PSI07] Length = 230 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 39/92 (42%), Positives = 65/92 (70%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 +F ++ AL + A++AEIVR+G+ A+PRGQME+A +LGL + +A RLV+LPQA+R+++ Sbjct: 94 QFNTMLTALVIFDGAYLAEIVRAGIQALPRGQMESARSLGLPYLQAMRLVILPQALRNML 153 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356 P L +Q ++ +K +SL + ++ V G I Sbjct: 154 PSLVNQLVSTIKETSLGYIISLPEVSFVAGQI 185 >gi|241554153|ref|YP_002979366.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240863459|gb|ACS61121.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 235 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 46/111 (41%), Positives = 69/111 (62%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I L AA+ +E +RSG+ +V GQM+AA ALG + A R V++PQ +R+ +PPL + Sbjct: 106 IGLGLCQAAYFSEDLRSGVRSVSPGQMQAARALGHGYVSAMRFVIMPQGVRNALPPLINH 165 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 ++L KNSSLAV +G ++L I N + + EI LI +YL S++I Sbjct: 166 SVSLFKNSSLAVVIGASELTHAVKEIENLSFRTFEIYLIGTVLYLFFSLVI 216 >gi|120403415|ref|YP_953244.1| polar amino acid ABC transporter inner membrane subunit [Mycobacterium vanbaalenii PYR-1] gi|119956233|gb|ABM13238.1| amino acid ABC transporter membrane protein 2, PAAT family [Mycobacterium vanbaalenii PYR-1] Length = 291 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 50/118 (42%), Positives = 70/118 (59%), Gaps = 11/118 (9%) Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 L+ Y A IAEIVR+G+ A+PRGQ EAA ALGLT + R +LLPQA+ S++P L SQ Sbjct: 146 GLTLYNGAVIAEIVRAGVHALPRGQTEAASALGLTWGQTMRSILLPQAITSMLPVLISQL 205 Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 + +LK+++L + F ++V G I + G Y+ I+IAL M LN Sbjct: 206 VVVLKDTALGYQITFVEMVRQGTVIGSAYGN-----------YIPALIVIALLMIALN 252 Score = 44.3 bits (103), Expect = 0.032, Method: Compositional matrix adjust. Identities = 23/72 (31%), Positives = 39/72 (54%) Query: 78 PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137 P+ + + T +L G T A ++ A +G ++G GRLS + + W V+VE FR Sbjct: 53 PFLTADLWRTYVLPGIEGTLTAAAVSIVLALALGFVLGVGRLSTHTAIRWASSVFVEFFR 112 Query: 138 NIPPLVVIFFLY 149 +P L+++ F Y Sbjct: 113 AVPVLIMMIFAY 124 >gi|89056449|ref|YP_511900.1| amino acid ABC transporter permease [Jannaschia sp. CCS1] gi|88865998|gb|ABD56875.1| amino acid ABC transporter membrane protein 2, PAAT family [Jannaschia sp. CCS1] Length = 293 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 34/94 (36%), Positives = 63/94 (67%) Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315 F G P +S + L+ + +AF+ EIVR+G+ +VP+GQ EAA ++G++ + R ++ Sbjct: 154 FFGDMRRFPSLISGVVVLALFESAFVGEIVRAGIQSVPKGQREAARSIGMSRWQELRYIV 213 Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349 LPQAM+ ++PP+ +Q++ L+K+SS+ + +L Sbjct: 214 LPQAMKKVVPPMANQFITLIKDSSIISLISVQEL 247 >gi|228909989|ref|ZP_04073809.1| Arginine transport system permease protein artQ [Bacillus thuringiensis IBL 200] gi|228849506|gb|EEM94340.1| Arginine transport system permease protein artQ [Bacillus thuringiensis IBL 200] Length = 225 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 53/206 (25%), Positives = 105/206 (50%), Gaps = 29/206 (14%) Query: 193 SFVLGIVLSLF------ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246 F+LG +L+L A ++ F+ + PL+ + FG+P ++ Y++ Sbjct: 39 GFILGTLLALCKIARIRALNIAADFYTSIFRGTPLVLQLMIIYFGVPQII----GYEI-- 92 Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306 P F++ +A S + A+++E++R+G+ AV +GQ EAA+ALG+ Sbjct: 93 -----------------PAFLAAVLAFSLNSGAYMSEVIRAGIQAVDKGQTEAAMALGIP 135 Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 + K R ++ PQA+++I+P L +++ L K S++ +G DL+ + +T + +E Sbjct: 136 YGKMMRNIIFPQALKNILPALVNEFATLTKESAVVTVIGATDLMRRAYIVGGETFKYLEP 195 Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKI 392 +L IY L I++ L + ++ Sbjct: 196 LLFVGLIYYMLVIILTLVGKAIEGRM 221 >gi|313497021|gb|ADR58387.1| Polar amino acid ABC transporter inner membrane subunit [Pseudomonas putida BIRD-1] Length = 263 Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 45/119 (37%), Positives = 75/119 (63%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IALS A+++EI R+G++ V RGQ EAA+ALG+ + ++LPQAMR IIPP +Q Sbjct: 136 IALSLNYGAYLSEIFRAGILGVARGQREAALALGMRTPQIFCHIILPQAMRVIIPPTANQ 195 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 ++++LK+SSL +G +++ + + + + +E++ IY LSI++ L RL Sbjct: 196 FISMLKDSSLISVMGVWEVMFLAQSYGRSSYRYLEMLTTAAVIYWVLSILLELLQARLE 254 >gi|309804200|ref|ZP_07698277.1| putative glutamine ABC transporter, permease protein GlnM [Lactobacillus iners LactinV 11V1-d] gi|309805504|ref|ZP_07699549.1| putative glutamine ABC transporter, permease protein GlnM [Lactobacillus iners LactinV 09V1-c] gi|309808678|ref|ZP_07702570.1| putative glutamine ABC transporter, permease protein GlnM [Lactobacillus iners LactinV 01V1-a] gi|312871462|ref|ZP_07731556.1| putative glutamine ABC transporter, permease protein GlnM [Lactobacillus iners LEAF 3008A-a] gi|312872438|ref|ZP_07732507.1| putative glutamine ABC transporter, permease protein GlnM [Lactobacillus iners LEAF 2062A-h1] gi|312874450|ref|ZP_07734480.1| putative glutamine ABC transporter, permease protein GlnM [Lactobacillus iners LEAF 2052A-d] gi|312874526|ref|ZP_07734551.1| putative glutamine ABC transporter, permease protein GlnM [Lactobacillus iners LEAF 2053A-b] gi|315653363|ref|ZP_07906285.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus iners ATCC 55195] gi|325911895|ref|ZP_08174299.1| putative glutamine ABC transporter, permease protein GlnM [Lactobacillus iners UPII 143-D] gi|325913433|ref|ZP_08175799.1| putative glutamine ABC transporter, permease protein GlnM [Lactobacillus iners UPII 60-B] gi|329920206|ref|ZP_08277018.1| putative glutamine ABC transporter permease protein GlnM [Lactobacillus iners SPIN 1401G] gi|308163603|gb|EFO65873.1| putative glutamine ABC transporter, permease protein GlnM [Lactobacillus iners LactinV 11V1-d] gi|308165155|gb|EFO67393.1| putative glutamine ABC transporter, permease protein GlnM [Lactobacillus iners LactinV 09V1-c] gi|308168152|gb|EFO70278.1| putative glutamine ABC transporter, permease protein GlnM [Lactobacillus iners LactinV 01V1-a] gi|311089917|gb|EFQ48336.1| putative glutamine ABC transporter, permease protein GlnM [Lactobacillus iners LEAF 2053A-b] gi|311090062|gb|EFQ48476.1| putative glutamine ABC transporter, permease protein GlnM [Lactobacillus iners LEAF 2052A-d] gi|311092020|gb|EFQ50395.1| putative glutamine ABC transporter, permease protein GlnM [Lactobacillus iners LEAF 2062A-h1] gi|311092982|gb|EFQ51332.1| putative glutamine ABC transporter, permease protein GlnM [Lactobacillus iners LEAF 3008A-a] gi|315489288|gb|EFU78928.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus iners ATCC 55195] gi|325476401|gb|EGC79563.1| putative glutamine ABC transporter, permease protein GlnM [Lactobacillus iners UPII 143-D] gi|325477202|gb|EGC80348.1| putative glutamine ABC transporter, permease protein GlnM [Lactobacillus iners UPII 60-B] gi|328936427|gb|EGG32873.1| putative glutamine ABC transporter permease protein GlnM [Lactobacillus iners SPIN 1401G] Length = 212 Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 57/169 (33%), Positives = 97/169 (57%), Gaps = 26/169 (15%) Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251 FS ++G++ +L R H + +Y+ F +P L+++ + Y + P + Sbjct: 29 FSLIIGVICALVEVSPCRIPH-----LIARIYVEIFR--NIPLLIIVMIFYLV---VPQM 78 Query: 252 G-QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 G + G T IAL+ YT+AFI+E V+SG+ ++ GQME A + G+++ +A Sbjct: 79 GLKLTGFGAGT---------IALTLYTSAFISETVKSGINSIGIGQMEGARSNGMSYVQA 129 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSS-LAVAVGF-----ADLVSVG 353 R V+LPQA++ +IPPL +Q+++L+KNSS LA GF AD++S+ Sbjct: 130 MRYVVLPQALKVVIPPLGNQFISLIKNSSVLAFVAGFDLMYQADVISLA 178 Score = 37.0 bits (84), Expect = 5.7, Method: Compositional matrix adjust. Identities = 18/58 (31%), Positives = 31/58 (53%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 G +T + + + IIG + +S ++ I R+YVE+FRNIP L+++ Y Sbjct: 15 GLSSTIMCSLIAIFFSLIIGVICALVEVSPCRIPHLIARIYVEIFRNIPLLIIVMIFY 72 >gi|163868658|ref|YP_001609867.1| glutamate/aspartate transport system permease protein GltJ [Bartonella tribocorum CIP 105476] gi|161018314|emb|CAK01872.1| glutamate/aspartate transport system permease protein GltJ [Bartonella tribocorum CIP 105476] Length = 250 Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 43/114 (37%), Positives = 75/114 (65%), Gaps = 2/114 (1%) Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 AL +T+A IAE VRSG+ A+ GQ AA+A+G T ++ R ++LP+A+R+I+PPLTS+ Sbjct: 120 ALGFFTSARIAEQVRSGIEAISSGQRYAAMAMGFTTYQSYRYIILPRAIRAIMPPLTSEA 179 Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE--IILIWMFIYLSLSIMIAL 383 + ++KNSS+A AV +L+ I + E +++ ++I+++L + I + Sbjct: 180 MGIVKNSSIAFAVSINELMQFQYQAIEEISHVYENYLLVTILYIFIALCVFIVM 233 Score = 44.3 bits (103), Expect = 0.034, Method: Compositional matrix adjust. Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 5/79 (6%) Query: 84 SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGR-LSANKLVAWICR----VYVEVFRN 138 +Y +L GF NT L+ + +I A G ++G R L ++ +CR ++VE+ RN Sbjct: 28 TYLDTLLDGFKNTVILSITSLILAIFCGVIIGTMRTLPKTSIINCVCRTLGALWVEIMRN 87 Query: 139 IPPLVVIFFLYKSVLSVLP 157 IP LV +F Y V + P Sbjct: 88 IPLLVQVFLWYFVVPKIYP 106 >gi|260904716|ref|ZP_05913038.1| amino acid ABC transporter membrane protein [Brevibacterium linens BL2] Length = 280 Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 40/91 (43%), Positives = 64/91 (70%), Gaps = 1/91 (1%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G+T+ F S+ I L+ Y +AEI+R+G++AVP+GQ EAA+A+GL + LVL+PQ Sbjct: 129 GNTIG-AFWSVVIGLTLYNGMVLAEIIRAGILAVPKGQREAAMAIGLRPGQVMSLVLMPQ 187 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349 A+R+++P + +Q + LLK+S+L V + DL Sbjct: 188 ALRAMMPTIIAQIVVLLKDSALGFIVTYQDL 218 >gi|268318646|ref|YP_003292302.1| ABC transporter permease component [Lactobacillus johnsonii FI9785] gi|262397021|emb|CAX66035.1| ABC transporter permease component [Lactobacillus johnsonii FI9785] Length = 537 Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 42/120 (35%), Positives = 75/120 (62%) Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 +S T A++AE++R G+ A P+GQ EAA ALG+TH + ++LPQA+R+ +P +T++++ Sbjct: 391 VSINTGAYLAEVIRGGINATPKGQFEAASALGMTHSQQMWHIILPQAIRNSLPSITNEFI 450 Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 +K++S+ + ++L VG T+ +QT + + I IYL L+ I N + K+ Sbjct: 451 VNIKDTSVLSIISVSELFFVGTTVASQTFEFFQTYFIISMIYLILTFSITRIFNFIERKL 510 Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust. Identities = 27/75 (36%), Positives = 34/75 (45%), Gaps = 10/75 (13%) Query: 85 YATAILVGFVNTFWLAFSGMIPATIIGTLVG----------AGRLSANKLVAWICRVYVE 134 Y + IL G T LA G I IG LVG G+ K+V W+ VY+E Sbjct: 296 YGSMILGGVGMTLLLALVGTIAGFFIGLLVGIVRTIPTPKSTGKRWGLKIVNWLLAVYIE 355 Query: 135 VFRNIPPLVVIFFLY 149 VFR P +V +Y Sbjct: 356 VFRGTPMMVQAAVIY 370 >gi|299770478|ref|YP_003732504.1| Binding-protein-dependent transport system inner membrane component family protein [Acinetobacter sp. DR1] gi|298700566|gb|ADI91131.1| Binding-protein-dependent transport system inner membrane component family protein [Acinetobacter sp. DR1] Length = 225 Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 54/166 (32%), Positives = 90/166 (54%), Gaps = 8/166 (4%) Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290 G+P LI + + +F P + F F + P F S+ + + + AAF +EIVRSG+ Sbjct: 64 GIP---LIQVIFIFYFLLPKI--FEFQSDTYWGPLFSSV-VTFAIFEAAFFSEIVRSGIQ 117 Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 ++ RGQ+ A ALG T+ ++ R V+LPQA R+++P L +Q + L ++ SL + D + Sbjct: 118 SISRGQVNAGYALGFTYGQSMRYVVLPQAFRNMLPVLLTQTIILFQDISLVYVISAPDFL 177 Query: 351 SVGGTIINQTGQAIE--IILIWMFIYLSLSIMIALFMNRLNAKIAL 394 T+ N G + LI +Y S +++ + RL KIA+ Sbjct: 178 GRADTLANTYGPETKATFYLIVAVVYFCSSFVLSQLVKRLQQKIAI 223 Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust. Identities = 22/62 (35%), Positives = 34/62 (54%) Query: 88 AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147 A+ GF+ T + M+ +IGT + RLS N + + + YV++FR IP + VIF Sbjct: 14 ALKEGFIFTLTVTVLAMMGGILIGTPLAMMRLSNNAIASNFAKFYVDLFRGIPLIQVIFI 73 Query: 148 LY 149 Y Sbjct: 74 FY 75 >gi|295426255|ref|ZP_06818916.1| His/Glu/Gln/Arg/opine family amino acid ABC superfamily ATP binding cassette transporter [Lactobacillus amylolyticus DSM 11664] gi|295064100|gb|EFG55047.1| His/Glu/Gln/Arg/opine family amino acid ABC superfamily ATP binding cassette transporter [Lactobacillus amylolyticus DSM 11664] Length = 536 Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 43/116 (37%), Positives = 72/116 (62%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I +S T A++AE++R G+I+ P GQ EAA ALG+TH + ++LPQA+++ +P +T++ Sbjct: 390 IIVSINTGAYLAEVIRGGIISTPEGQFEAASALGMTHNQRMWHIILPQAIKNCLPSITNE 449 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386 ++ +K++S+ + ++L VG TI +QT Q L IYL L+ I N Sbjct: 450 FIVNIKDTSVLSIISVSELFFVGTTIASQTFQFFPTYLTISAIYLVLTFTITRIFN 505 >gi|226309415|ref|YP_002769375.1| ABC transporter substrate-binding/permease protein [Rhodococcus erythropolis PR4] gi|226188532|dbj|BAH36636.1| putative ABC transporter substrate-binding/permease protein [Rhodococcus erythropolis PR4] Length = 594 Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 57/171 (33%), Positives = 98/171 (57%), Gaps = 13/171 (7%) Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285 T + GLP +V+I + LG + G T S + ALS +A+I EI Sbjct: 410 TDIFRGLPAVVIILIIG--------LGVGPIVKGITGSNPYWLGVAALSLLASAYIGEIF 461 Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345 RSG+ +V GQ+EA+ ALG ++RK+ LV++PQ +R ++P L +Q+++L+K+SSL +G Sbjct: 462 RSGIQSVESGQLEASRALGFSYRKSMSLVVIPQGVRRVLPALMNQFISLIKDSSLIYFLG 521 Query: 346 F----ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 +L +VG + QTG ++ +F YL+L+I + +N ++ ++ Sbjct: 522 LLVTQRELFAVGRDLNAQTGSLSPLVAAGLF-YLALTIPLTHLVNYIDNRL 571 Score = 42.0 bits (97), Expect = 0.15, Method: Compositional matrix adjust. Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 3/68 (4%) Query: 91 VGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYK 150 G NT LA + I TI+G L+ +S + + W RVY ++FR +P +V+I + Sbjct: 368 TGLPNTLILALASGIIGTILGMLLAVAGISRTRWLRWPARVYTDIFRGLPAVVIILIIG- 426 Query: 151 SVLSVLPI 158 L V PI Sbjct: 427 --LGVGPI 432 >gi|222081595|ref|YP_002540959.1| amino acid ABC transporter [Agrobacterium radiobacter K84] gi|221726274|gb|ACM29363.1| amino acid ABC transporter [Agrobacterium radiobacter K84] Length = 219 Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 56/191 (29%), Positives = 102/191 (53%), Gaps = 18/191 (9%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 +FS++ G+ A L+ + + Y+ + + G PTL+ + + ++F P Sbjct: 32 IFSWICGL-----AAALAHGSKWRAARMASAFYV--WFVRGTPTLIQV---FIIYFGLPA 81 Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 G +SP F++ ++L + A++AEI+R GL A+PRGQ E+A+ALG + + Sbjct: 82 FGI-------KLSP-FVAGVLSLGINSGAYVAEIIRGGLSAIPRGQTESALALGFSPSET 133 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370 R ++LPQ R I+P +T++ ++ LKN+SL + +L T+I T + E + Sbjct: 134 MRSIILPQVSRIILPSITNEAISTLKNTSLLSTITVVELTLYAQTLIAATFRPFEFYITV 193 Query: 371 MFIYLSLSIMI 381 IYL L+ ++ Sbjct: 194 AIIYLVLTTIL 204 >gi|170735823|ref|YP_001777083.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia cenocepacia MC0-3] gi|169818011|gb|ACA92593.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia cenocepacia MC0-3] Length = 218 Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 59/189 (31%), Positives = 97/189 (51%), Gaps = 17/189 (8%) Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249 V F++G++ +F R + K L +YI LI G P +V + L+F P Sbjct: 30 LVGGFIVGMIAGMF-----RAYGPKAMNVLAQVYIE--LIRGTPIVVQVMF---LYFALP 79 Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309 +L G + IA++ + A++AE+VR L+++P+G EA +A+GL+ + Sbjct: 80 LLAHIRIDG-------LTAAIIAITVNSGAYLAEVVRGALLSIPKGLTEAGLAMGLSMPR 132 Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369 ++ P A R +IPPL +Q + LK++SL + +G +L G II QA+EI Sbjct: 133 VLLKIVGPLAFRRLIPPLGNQCIVSLKDTSLFIVIGVGELTRKGQEIIAGNFQAVEIWSA 192 Query: 370 WMFIYLSLS 378 IYL L+ Sbjct: 193 VAVIYLILT 201 >gi|15888896|ref|NP_354577.1| ABC transporter, membrane spanning protein (amino acid) [Agrobacterium tumefaciens str. C58] gi|15156666|gb|AAK87362.1| ABC transporter, membrane spanning protein (amino acid) [Agrobacterium tumefaciens str. C58] Length = 385 Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 33/88 (37%), Positives = 63/88 (71%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 +F+ + +S +++A++AE++R GL A+P+GQ E A +LGL + + TRL++LPQA++ +I Sbjct: 247 KFLRALVGVSLFSSAYMAEVIRGGLQAIPKGQYEGADSLGLNYWQKTRLIVLPQALKLVI 306 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSV 352 P + + ++ L K++SL +G DL+ + Sbjct: 307 PGIVNTFIGLFKDTSLVSIIGMFDLLGI 334 >gi|134093510|ref|YP_001098585.1| glutamate/aspartate ABC transporter membrane protein [Herminiimonas arsenicoxydans] gi|133737413|emb|CAL60456.1| Glutamate/aspartate transport system permease protein gltK [Herminiimonas arsenicoxydans] Length = 228 Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 43/127 (33%), Positives = 75/127 (59%) Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327 S YI + AA+ EI+R+G+ ++ +GQ+ AA ALGL++ +A RLV+LPQA R+++P L Sbjct: 100 SAYITFIMFEAAYFCEIMRAGIQSISKGQVNAAYALGLSYAQAMRLVVLPQAFRNMLPIL 159 Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387 +Q + L ++ SL + D V I + + +E+ L +Y LS ++ + + Sbjct: 160 LTQTIVLFQDVSLVSLLNVTDFVGASVKIAQRDSRVVEMYLFVAIVYFVLSFALSSMVKQ 219 Query: 388 LNAKIAL 394 L +IA+ Sbjct: 220 LQKRIAI 226 Score = 42.0 bits (97), Expect = 0.17, Method: Compositional matrix adjust. Identities = 23/61 (37%), Positives = 35/61 (57%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G T L + I + GTL+ RLS+ K +A++ YV + R+IP L+VIF+ Sbjct: 16 LLSGLKYTLQLTLTAAIGGVLFGTLLALARLSSFKSLAFLAAAYVNLMRSIPLLLVIFWF 75 Query: 149 Y 149 Y Sbjct: 76 Y 76 >gi|89899055|ref|YP_521526.1| amino acid ABC transporter permease [Rhodoferax ferrireducens T118] gi|89343792|gb|ABD67995.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Rhodoferax ferrireducens T118] Length = 216 Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 44/94 (46%), Positives = 61/94 (64%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 F + +ALS A FI+EIV SG+ AVP GQ+EAA + GLT + RLV++PQA R I+ Sbjct: 90 SFTAGALALSNIAACFISEIVASGIRAVPIGQVEAAASAGLTRLQQLRLVVMPQATRMIV 149 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN 358 P L Q++ L+K+SS+ A+G DL G I+ Sbjct: 150 PSLVGQFVLLVKDSSVVSAIGLLDLTRSGWIIVQ 183 Score = 43.9 bits (102), Expect = 0.043, Method: Compositional matrix adjust. Identities = 21/58 (36%), Positives = 35/58 (60%) Query: 83 SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140 + Y IL G T L+F G++ T+IG ++G GR S++KL++ + Y ++FR P Sbjct: 12 AQYYPVILKGIGVTLALSFIGIVAGTLIGFVLGIGRASSHKLLSLVVGAYTDIFRGTP 69 >gi|226224893|ref|YP_002759000.1| amino acid ABC-transporter (permease) [Listeria monocytogenes Clip81459] gi|225877355|emb|CAS06069.1| Putative amino acid ABC-transporter (permease) [Listeria monocytogenes serotype 4b str. CLIP 80459] Length = 238 Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 67/211 (31%), Positives = 109/211 (51%), Gaps = 24/211 (11%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 +F F+LG++LSL R + L +YIS F G P +V + + + + P Sbjct: 33 IFGFILGVLLSL-----PRIYKIPVLDQLVRVYISFFR--GTPIMVQL---FIVFYGIPA 82 Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCY---TAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307 L I S + P LY A++ Y +AA IAE++R+G+ +V GQ EAA ++GL+ Sbjct: 83 LSSIVGIDLSQMDP----LYAAIATYALSSAATIAEVIRAGVNSVDAGQAEAAYSIGLSS 138 Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367 R+ ++LPQA+ +P + + LK++SLA ++G D+ G T+I + A+E Sbjct: 139 RQTFLRIILPQALYQALPNFGNLVIGYLKDTSLAFSIGVMDMSGRGQTLITLSNHALE-- 196 Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 +Y+SLSI+ L L EK+ Sbjct: 197 -----VYISLSIIYYLTAVLLEYSFKWIEKR 222 >gi|125624757|ref|YP_001033240.1| glutamate ABC transporter permease protein [Lactococcus lactis subsp. cremoris MG1363] gi|124493565|emb|CAL98550.1| glutamate ABC transporter permease protein [Lactococcus lactis subsp. cremoris MG1363] gi|300071557|gb|ADJ60957.1| glutamate ABC transporter permease protein [Lactococcus lactis subsp. cremoris NZ9000] Length = 228 Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 45/127 (35%), Positives = 78/127 (61%), Gaps = 4/127 (3%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I +S + A++AEIVR+G+ AVP GQ EAA +LG+ R+A V+LPQA+R+I+P + ++ Sbjct: 101 IVISLNSGAYMAEIVRAGIEAVPLGQKEAAYSLGIRPRQAMTTVILPQALRNILPAVGNE 160 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE----IILIWMFIYLSLSIMIALFMN 386 ++ ++K+SSL +G ++ + T+ N T Q I + L + + +S ++ LF Sbjct: 161 FVTIIKDSSLLYTIGVMEVFNGAQTVANLTYQTISPMIFVALYYFVVTFVVSRLLVLFEK 220 Query: 387 RLNAKIA 393 +L A Sbjct: 221 KLGKGYA 227 >gi|326773223|ref|ZP_08232506.1| ABC-type amino acid transport system, permease component [Actinomyces viscosus C505] gi|326636453|gb|EGE37356.1| ABC-type amino acid transport system, permease component [Actinomyces viscosus C505] Length = 321 Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 51/136 (37%), Positives = 82/136 (60%), Gaps = 4/136 (2%) Query: 260 STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319 +TV F++ + L A+++EIVRSGL +V +GQ EAA ALG++ + R ++LPQA Sbjct: 148 TTVFTPFVAAVLGLGINEGAYLSEIVRSGLNSVDKGQSEAAGALGMSRGQILRRIVLPQA 207 Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFA-DLVSVGGTIINQTGQAIEIIL---IWMFIYL 375 MR I+PP ++ +++LK +SL +AV F DL V + + T Q I ++L IW I Sbjct: 208 MRVIVPPTGNETISMLKTTSLVLAVPFTLDLTFVTNSYASLTYQIIPLLLVAAIWYIIIT 267 Query: 376 SLSIMIALFMNRLNAK 391 S+ ++ ++ R K Sbjct: 268 SILMVGQHYIERYYGK 283 >gi|218191223|gb|EEC73650.1| hypothetical protein OsI_08176 [Oryza sativa Indica Group] Length = 449 Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 41/129 (31%), Positives = 79/129 (61%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + + + + A+IAEI R ++++ G EA +ALGL+ R+ R V++P A+R ++P Sbjct: 320 FTAAVVTIMINSGAYIAEITRGAVLSIHNGFREAGLALGLSRRETIRYVIMPLALRRMLP 379 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PL +Q++ +K++SL + +G A+L G II +A+EI IYL ++++++ + Sbjct: 380 PLGNQWIISIKDTSLFIVIGVAELTRQGQEIIAGNFRALEIWSAVAVIYLIITLVLSFVL 439 Query: 386 NRLNAKIAL 394 RL ++ + Sbjct: 440 RRLERRMKI 448 >gi|262278837|ref|ZP_06056622.1| glutamate/aspartate transporter [Acinetobacter calcoaceticus RUH2202] gi|262259188|gb|EEY77921.1| glutamate/aspartate transporter [Acinetobacter calcoaceticus RUH2202] Length = 225 Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 54/166 (32%), Positives = 90/166 (54%), Gaps = 8/166 (4%) Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290 G+P LI + + +F P + F F + P F S+ + + + AAF +EIVRSG+ Sbjct: 64 GIP---LIQVIFIFYFLLPKI--FEFQSDTYWGPLFSSV-VTFAIFEAAFFSEIVRSGIQ 117 Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 ++ RGQ+ A ALG T+ ++ R V+LPQA R+++P L +Q + L ++ SL + D + Sbjct: 118 SISRGQVNAGYALGFTYGQSMRYVVLPQAFRNMLPVLLTQTIILFQDISLVYVISAPDFL 177 Query: 351 SVGGTIINQTGQAIE--IILIWMFIYLSLSIMIALFMNRLNAKIAL 394 T+ N G + LI +Y S +++ + RL KIA+ Sbjct: 178 GRADTLANTYGPETKATFYLIVAVVYFCSSFVLSQLVKRLQQKIAI 223 Score = 40.4 bits (93), Expect = 0.46, Method: Compositional matrix adjust. Identities = 22/62 (35%), Positives = 35/62 (56%) Query: 88 AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147 A+ GF+ T + M+ +IGT + RLS+N + + + YV++FR IP + VIF Sbjct: 14 ALKEGFIFTLTVTVLAMLGGILIGTPLAMMRLSSNAIASNFAKFYVDLFRGIPLIQVIFI 73 Query: 148 LY 149 Y Sbjct: 74 FY 75 >gi|229104758|ref|ZP_04235419.1| Arginine transport system permease protein artQ [Bacillus cereus Rock3-28] gi|228678631|gb|EEL32847.1| Arginine transport system permease protein artQ [Bacillus cereus Rock3-28] Length = 225 Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 40/129 (31%), Positives = 79/129 (61%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P F++ +A S + A+++E++R+G+ AV +GQ EAA+ALG+ + K R ++ PQA+++I Sbjct: 93 PAFLAAVLAFSLNSGAYMSEVIRAGIQAVDKGQTEAAMALGIPYGKMMRNIIFPQALKNI 152 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 +P L +++ L K S++ +G DL+ + +T + +E +L IY +L I++ L Sbjct: 153 LPALVNEFATLTKESAVVTVIGATDLMRRAYIVGGETFKYLEPLLFVGLIYYTLVIILTL 212 Query: 384 FMNRLNAKI 392 + ++ Sbjct: 213 VGKAIEGRM 221 >gi|30022233|ref|NP_833864.1| arginine ABC transporter permease [Bacillus cereus ATCC 14579] gi|218233478|ref|YP_002368956.1| amino acid ABC transporter, permease protein [Bacillus cereus B4264] gi|296504643|ref|YP_003666343.1| arginine ABC transporter permease [Bacillus thuringiensis BMB171] gi|29897790|gb|AAP11065.1| Arginine transport system permease protein artQ [Bacillus cereus ATCC 14579] gi|218161435|gb|ACK61427.1| amino acid ABC transporter, permease protein [Bacillus cereus B4264] gi|296325695|gb|ADH08623.1| arginine ABC transporter permease [Bacillus thuringiensis BMB171] Length = 219 Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 53/206 (25%), Positives = 105/206 (50%), Gaps = 29/206 (14%) Query: 193 SFVLGIVLSLF------ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246 F+LG +L+L A ++ F+ + PL+ + FG+P ++ Y++ Sbjct: 33 GFILGTLLALCKIARIRALNIAADFYTSIFRGTPLVLQLMIIYFGVPQII----GYEI-- 86 Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306 P F++ +A S + A+++E++R+G+ AV +GQ EAA+ALG+ Sbjct: 87 -----------------PAFLAAVLAFSLNSGAYMSEVIRAGIQAVDKGQTEAAMALGVP 129 Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 + K R ++ PQA+++I+P L +++ L K S++ +G DL+ + +T + +E Sbjct: 130 YGKMMRNIIFPQALKNILPALVNEFATLTKESAVVTVIGATDLMRRAYIVGGETFKYLEP 189 Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKI 392 +L IY L I++ L + ++ Sbjct: 190 LLFVGLIYYMLVIILTLVGKAIEGRM 215 >gi|89073070|ref|ZP_01159617.1| putative ABC-type amino acid transport system, permease component [Photobacterium sp. SKA34] gi|89051288|gb|EAR56744.1| putative ABC-type amino acid transport system, permease component [Photobacterium sp. SKA34] Length = 365 Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 35/83 (42%), Positives = 60/83 (72%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I + ++AA++AE++R GL A+P+GQ EAA ALGLT+ K L++LPQA++ IP + + Sbjct: 235 IGVVMFSAAYMAEVIRGGLQAIPKGQYEAADALGLTYWKKMYLIVLPQALKITIPSIVNT 294 Query: 331 YLNLLKNSSLAVAVGFADLVSVG 353 ++ L K++SL + +G D++ +G Sbjct: 295 FIGLFKDTSLVLIIGMFDVLGIG 317 >gi|229494745|ref|ZP_04388503.1| polar amino acid ABC transporter, inner membrane subunit [Rhodococcus erythropolis SK121] gi|229318412|gb|EEN84275.1| polar amino acid ABC transporter, inner membrane subunit [Rhodococcus erythropolis SK121] Length = 605 Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 57/171 (33%), Positives = 98/171 (57%), Gaps = 13/171 (7%) Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285 T + GLP +V+I + LG + G T S + ALS +A+I EI Sbjct: 421 TDIFRGLPAVVIILIIG--------LGVGPIVKGITGSNPYWLGVAALSLLASAYIGEIF 472 Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345 RSG+ +V GQ+EA+ ALG ++RK+ LV++PQ +R ++P L +Q+++L+K+SSL +G Sbjct: 473 RSGIQSVESGQLEASRALGFSYRKSMSLVVIPQGVRRVLPALMNQFISLIKDSSLIYFLG 532 Query: 346 F----ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 +L +VG + QTG ++ +F YL+L+I + +N ++ ++ Sbjct: 533 LLVTQRELFAVGRDLNAQTGSLSPLVAAGLF-YLALTIPLTHLVNYIDNRL 582 Score = 42.4 bits (98), Expect = 0.15, Method: Compositional matrix adjust. Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 3/68 (4%) Query: 91 VGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYK 150 G NT LA + I TI+G L+ +S + + W RVY ++FR +P +V+I + Sbjct: 379 TGLPNTLILALASGIIGTILGMLLAVAGISRTRWLRWPARVYTDIFRGLPAVVIILIIG- 437 Query: 151 SVLSVLPI 158 L V PI Sbjct: 438 --LGVGPI 443 >gi|227889073|ref|ZP_04006878.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus johnsonii ATCC 33200] gi|227850302|gb|EEJ60388.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus johnsonii ATCC 33200] Length = 537 Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 42/122 (34%), Positives = 76/122 (62%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + +S T A++AE++R G+ A P+GQ EAA ALG+TH + ++LPQA+R+ +P +T++ Sbjct: 389 VIVSINTGAYLAEVIRGGINATPKGQFEAASALGMTHSQQMWHIILPQAIRNSLPSITNE 448 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++ +K++S+ + ++L VG T+ +QT + + I IYL L+ I N + Sbjct: 449 FIVNIKDTSVLSIISVSELFFVGTTVASQTFEFFQTYFIISMIYLILTFSITRVFNFIER 508 Query: 391 KI 392 K+ Sbjct: 509 KL 510 Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust. Identities = 27/75 (36%), Positives = 34/75 (45%), Gaps = 10/75 (13%) Query: 85 YATAILVGFVNTFWLAFSGMIPATIIGTLVG----------AGRLSANKLVAWICRVYVE 134 Y + IL G T LA G I IG LVG G+ K+V W+ VY+E Sbjct: 296 YGSMILGGVGMTLLLALVGTIAGFFIGLLVGIVRTIPTPKSTGKRWGLKIVNWLLAVYIE 355 Query: 135 VFRNIPPLVVIFFLY 149 VFR P +V +Y Sbjct: 356 VFRGTPMMVQAAVIY 370 >gi|157963212|ref|YP_001503246.1| polar amino acid ABC transporter inner membrane subunit [Shewanella pealeana ATCC 700345] gi|157848212|gb|ABV88711.1| polar amino acid ABC transporter, inner membrane subunit [Shewanella pealeana ATCC 700345] Length = 226 Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 42/122 (34%), Positives = 77/122 (63%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IA + A+I+EI+R+G+ AV +GQMEAA +LGL+H + + V+LPQA+++I+P L ++ Sbjct: 101 IAFGLNSGAYISEIIRAGIQAVDKGQMEAARSLGLSHGQTMKEVILPQAIKNILPSLGNE 160 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++ LLK +++ +G DL+ G I ++T + + IYL L+ + ++R Sbjct: 161 FIVLLKETAVIGFIGGVDLMRAGEIIRSRTFEDSVPLFTCALIYLLLTYIFTFMLSRFET 220 Query: 391 KI 392 ++ Sbjct: 221 RL 222 >gi|229075860|ref|ZP_04208836.1| Arginine transport system permease protein artQ [Bacillus cereus Rock4-18] gi|229098623|ref|ZP_04229563.1| Arginine transport system permease protein artQ [Bacillus cereus Rock3-29] gi|229117649|ref|ZP_04247020.1| Arginine transport system permease protein artQ [Bacillus cereus Rock1-3] gi|228665828|gb|EEL21299.1| Arginine transport system permease protein artQ [Bacillus cereus Rock1-3] gi|228684702|gb|EEL38640.1| Arginine transport system permease protein artQ [Bacillus cereus Rock3-29] gi|228707175|gb|EEL59372.1| Arginine transport system permease protein artQ [Bacillus cereus Rock4-18] Length = 225 Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 40/129 (31%), Positives = 79/129 (61%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P F++ +A S + A+++E++R+G+ AV +GQ EAA+ALG+ + K R ++ PQA+++I Sbjct: 93 PAFLAAVLAFSLNSGAYMSEVIRAGIQAVDKGQTEAAMALGIPYGKMMRNIIFPQALKNI 152 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 +P L +++ L K S++ +G DL+ + +T + +E +L IY +L I++ L Sbjct: 153 LPALVNEFATLTKESAVVTVIGATDLMRRAYIVGGETFKYLEPLLFVGLIYYTLVIILTL 212 Query: 384 FMNRLNAKI 392 + ++ Sbjct: 213 VGKAIEGRM 221 >gi|227894269|ref|ZP_04012074.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus ultunensis DSM 16047] gi|227863912|gb|EEJ71333.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus ultunensis DSM 16047] Length = 526 Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 43/122 (35%), Positives = 76/122 (62%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I +S T A++AE++R G+I+ P GQ EAA ALG+TH + ++LPQA+R+ +P +T++ Sbjct: 380 IIVSINTGAYLAEVIRGGIISTPEGQFEAASALGMTHNQRMWHIILPQAIRNCLPSITNE 439 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++ +K++S+ + ++L VG TI +Q+ + L+ IYL L+ I N + Sbjct: 440 FIVNIKDTSVLSIISVSELFFVGTTIASQSFKFFPTYLMISAIYLILTFTITRIFNFIEK 499 Query: 391 KI 392 K+ Sbjct: 500 KL 501 Score = 38.1 bits (87), Expect = 2.4, Method: Compositional matrix adjust. Identities = 30/93 (32%), Positives = 39/93 (41%), Gaps = 10/93 (10%) Query: 67 RAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVG----------A 116 +AG E + T+ Y I+ G T LA G I IG LVG Sbjct: 269 KAGNETKKENWLVTTWKQYGGMIMSGIGMTLLLALVGTIVGFFIGLLVGIVRTIPTPTTR 328 Query: 117 GRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 G+ A V W+ VYVE+FR P +V +Y Sbjct: 329 GKRWALNFVKWLLSVYVEIFRGTPMMVQAAVIY 361 >gi|117620816|ref|YP_857214.1| L-cystine ABC transporter, permease protein [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117562223|gb|ABK39171.1| L-cystine ABC transporter, permease protein [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 225 Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 61/204 (29%), Positives = 106/204 (51%), Gaps = 14/204 (6%) Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252 +FVLGIVL L + L+R + L Y+ +LI G P LV + L + Sbjct: 30 TFVLGIVLGL-SVALARLYGPAPLVMLVRFYV--WLIRGTPLLVQLFLIF---------- 76 Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312 + V F + I + A+ +EI+R+ L A+P+GQ EAA ++G+ + Sbjct: 77 -YGLPSAGIVLDAFTAAVIGFTLNIGAYSSEIIRATLAAIPKGQWEAAYSIGMNWPQVMW 135 Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372 V+LPQA R +PPL++ +++L+K++SLA AV +L + + T + + + + Sbjct: 136 RVILPQAARIAVPPLSNTFISLVKDTSLAAAVTVPELFQAAQRLASVTYEPLILYVETAL 195 Query: 373 IYLSLSIMIALFMNRLNAKIALKE 396 IYL S +++ ++L ++A KE Sbjct: 196 IYLLFSSVLSTLQDKLEQRLAHKE 219 >gi|15599388|ref|NP_252882.1| permease of ABC transporter [Pseudomonas aeruginosa PAO1] gi|9950403|gb|AAG07580.1|AE004835_9 probable permease of ABC transporter [Pseudomonas aeruginosa PAO1] Length = 234 Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 46/133 (34%), Positives = 81/133 (60%), Gaps = 10/133 (7%) Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286 F++ G+P L++I Y F + GQ + +F ++ +AL + A ++AEIVR Sbjct: 68 FVVRGVPLLMVIFWAY--FFLPTLTGQ--------RTDQFTTMLLALVLFDAVYLAEIVR 117 Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346 +G+ + RGQ EAA +LGL + + RLV+LPQA+R+++P L +Q+++ +K +SL +G Sbjct: 118 AGIQGLDRGQFEAARSLGLGYLASMRLVVLPQALRNMLPSLVNQFVSTIKETSLGYIIGL 177 Query: 347 ADLVSVGGTIINQ 359 A++ + I Q Sbjct: 178 AEVSFIASQINTQ 190 >gi|323490820|ref|ZP_08096021.1| polar amino acid ABC transporter, inner membrane subunit [Planococcus donghaensis MPA1U2] gi|323395532|gb|EGA88377.1| polar amino acid ABC transporter, inner membrane subunit [Planococcus donghaensis MPA1U2] Length = 219 Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 59/202 (29%), Positives = 107/202 (52%), Gaps = 27/202 (13%) Query: 195 VLGIVLSLFATRLSRHFHEKTGKALPLLYIS---TFLIFGLPTLVLIALKYQLHFDKPVL 251 +LG +L+LF K G PL + + T + G P ++ + + Y F P L Sbjct: 35 ILGTLLALF----------KIGSIKPLRWFADAYTSIFRGTPLILQLMIIY---FSTPQL 81 Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311 ++ F+S +A ++A+I+EI+R+G+ AV +GQMEAA ALG+ +R Sbjct: 82 TGYDI-------SAFLSAILAFGLNSSAYISEIIRAGIQAVDKGQMEAAQALGVPYRAMM 134 Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371 + ++LPQA+++I+P L ++++ L K S++ +G+ DL+ + + E +L Sbjct: 135 KDIILPQALKNILPALMNEFITLTKESAIVSTIGYLDLMRRAQVVGADLFRNFEPLLFVG 194 Query: 372 FIY----LSLSIMIALFMNRLN 389 FIY + L+++ +F RL Sbjct: 195 FIYWCLVMGLTMIGRVFERRLK 216 >gi|317046630|ref|YP_004114278.1| polar amino acid ABC transporter inner membrane subunit [Pantoea sp. At-9b] gi|316948247|gb|ADU67722.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea sp. At-9b] Length = 231 Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 44/106 (41%), Positives = 67/106 (63%) Query: 260 STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319 + ++ EF+ +AL AA+ +E +RSGL A+P GQ EAA ALG+ + +A V+LPQ Sbjct: 93 NDLNAEFLFSLVALGLCQAAYFSEDIRSGLRAIPDGQNEAARALGMGYVRAMWSVILPQG 152 Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365 +R+ +P L + + L KN+SLA+ +G A+L V I NQT + E Sbjct: 153 IRNALPALINHTVLLFKNTSLAMVIGVAELTYVTRDIENQTFRTFE 198 >gi|153835217|ref|ZP_01987884.1| general L-amino acid transport system permease protein AapM [Vibrio harveyi HY01] gi|148868283|gb|EDL67415.1| general L-amino acid transport system permease protein AapM [Vibrio harveyi HY01] Length = 365 Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 36/98 (36%), Positives = 66/98 (67%) Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315 F+ + + + + I + ++AA++AE+VR GL A+P+GQ EAA ALGL++ K L++ Sbjct: 220 FLAEGSETDKLIRALIGVVMFSAAYMAEVVRGGLQAIPKGQYEAADALGLSYWKKMGLII 279 Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353 LPQA++ IP + + ++ L K++SL + +G D++ +G Sbjct: 280 LPQALKITIPSIVNTFIGLFKDTSLVLIIGMFDVLGIG 317 >gi|322833086|ref|YP_004213113.1| polar amino acid ABC transporter inner membrane subunit [Rahnella sp. Y9602] gi|321168287|gb|ADW73986.1| polar amino acid ABC transporter, inner membrane subunit [Rahnella sp. Y9602] Length = 222 Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 42/119 (35%), Positives = 74/119 (62%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + LS T+A++AEI R+ + +V +GQ+EA++A GL+ KA+ +L PQA R+ IP + Sbjct: 95 LGLSLNTSAYLAEIFRAAIDSVDKGQLEASLASGLSMFKASSRILFPQACRNAIPATGNV 154 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 Y+ L+KNSSLA +G ++L++ G + ++ + E +Y +L+I+ + RL Sbjct: 155 YIGLIKNSSLAFTLGVSELLAAGKMVATESLKFFEAYFAVALVYWALTIIFSELQRRLE 213 >gi|121534020|ref|ZP_01665846.1| polar amino acid ABC transporter, inner membrane subunit [Thermosinus carboxydivorans Nor1] gi|121307531|gb|EAX48447.1| polar amino acid ABC transporter, inner membrane subunit [Thermosinus carboxydivorans Nor1] Length = 217 Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 39/134 (29%), Positives = 81/134 (60%), Gaps = 1/134 (0%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P+F + +A AA+ AEI R+G+ ++ RGQ EAA ALG+T+ + R ++LPQ ++ + Sbjct: 85 PDFPAAVVAFVLNYAAYFAEIFRAGIQSIDRGQYEAAKALGMTYVQTMRRIILPQVVKRV 144 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 +PP++++ + L+K++SL + DL+ +I+ + I+ +F YL +++++ Sbjct: 145 LPPVSNETITLVKDTSLIYVLAMNDLLRTARSIVQRDFNTTAFIVAAVF-YLVMTLVLTW 203 Query: 384 FMNRLNAKIALKEK 397 +L + A+ ++ Sbjct: 204 LFQKLEQRYAVYDE 217 >gi|91227963|ref|ZP_01262073.1| amino acid ABC transporter, permease protein [Vibrio alginolyticus 12G01] gi|91188284|gb|EAS74582.1| amino acid ABC transporter, permease protein [Vibrio alginolyticus 12G01] Length = 365 Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 36/98 (36%), Positives = 66/98 (67%) Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315 F+ + + + + I + + +A++AE+VR GL A+P+GQ EAA ALGL++ K T L++ Sbjct: 220 FMSEGSETDKLIRALIGVVMFASAYMAEVVRGGLQAIPKGQYEAADALGLSYWKKTGLII 279 Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353 LPQA++ IP + + ++ L K++SL + +G D++ +G Sbjct: 280 LPQALKIAIPSIVNTFIGLFKDTSLVLIIGMFDVLGIG 317 Score = 36.6 bits (83), Expect = 6.8, Method: Compositional matrix adjust. Identities = 19/55 (34%), Positives = 33/55 (60%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIF 146 G + T +A G++ + IG ++ GR S ++ IC VY+EV+R +P + V+F Sbjct: 157 GLLVTLIIALVGIVVSLPIGVVLALGRRSEMPIIRSICTVYIEVWRGVPLITVLF 211 >gi|295102408|emb|CBK99953.1| amino acid ABC transporter membrane protein, PAAT family (TC 3.A.1.3.-) [Faecalibacterium prausnitzii L2-6] Length = 254 Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 52/195 (26%), Positives = 104/195 (53%), Gaps = 20/195 (10%) Query: 210 HFHEKTGKALPLL-------YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV 262 H ++ G++ P+L + T +I G P +V + + + F+ F +G Sbjct: 73 HDQQRPGRSNPVLGGFNAVCQVYTTVIRGTPMMVQLLIMSMVIFNNSR--NFTMVGA--- 127 Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322 +AL + A+++EI+R GL+AV GQMEA +LGL + ++++PQA+R+ Sbjct: 128 --------LALGINSGAYVSEIIRGGLMAVDPGQMEAGRSLGLNYITTMVVIIIPQAIRA 179 Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382 ++P L ++++ LLK++SL +G +L+ I+N+T +A+ + IYL L ++ Sbjct: 180 VLPALGNEFIMLLKDTSLITVIGGKELLYAAQGIMNRTYEAMFPLFGVALIYLVLVMIFT 239 Query: 383 LFMNRLNAKIALKEK 397 + + ++A ++ Sbjct: 240 WLLAKFERRLAQSDR 254 >gi|229047847|ref|ZP_04193426.1| Arginine transport system permease protein artQ [Bacillus cereus AH676] gi|229111627|ref|ZP_04241178.1| Arginine transport system permease protein artQ [Bacillus cereus Rock1-15] gi|229146727|ref|ZP_04275093.1| Arginine transport system permease protein artQ [Bacillus cereus BDRD-ST24] gi|228636747|gb|EEK93211.1| Arginine transport system permease protein artQ [Bacillus cereus BDRD-ST24] gi|228672009|gb|EEL27302.1| Arginine transport system permease protein artQ [Bacillus cereus Rock1-15] gi|228723508|gb|EEL74874.1| Arginine transport system permease protein artQ [Bacillus cereus AH676] Length = 225 Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 53/206 (25%), Positives = 105/206 (50%), Gaps = 29/206 (14%) Query: 193 SFVLGIVLSLF------ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246 F+LG +L+L A ++ F+ + PL+ + FG+P ++ Y++ Sbjct: 39 GFILGTLLALCKIARIRALNIAADFYTSIFRGTPLVLQLMIIYFGVPQII----GYEI-- 92 Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306 P F++ +A S + A+++E++R+G+ AV +GQ EAA+ALG+ Sbjct: 93 -----------------PAFLAAVLAFSLNSGAYMSEVIRAGIQAVDKGQTEAAMALGVP 135 Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 + K R ++ PQA+++I+P L +++ L K S++ +G DL+ + +T + +E Sbjct: 136 YGKMMRNIIFPQALKNILPALVNEFATLTKESAVVTVIGATDLMRRAYIVGGETFKYLEP 195 Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKI 392 +L IY L I++ L + ++ Sbjct: 196 LLFVGLIYYMLVIILTLVGKAIEGRM 221 >gi|145297674|ref|YP_001140515.1| ABC-type glutamine/glutamate transporter, permease protein [Aeromonas salmonicida subsp. salmonicida A449] gi|142850446|gb|ABO88767.1| ABC-type glutamine/glutamate transporter, permease protein [Aeromonas salmonicida subsp. salmonicida A449] Length = 220 Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 40/97 (41%), Positives = 62/97 (63%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P F + L+ + A+ + E+VR GL ++ RGQ EA +ALGL+ + R VLLPQA++ + Sbjct: 88 PAFWCAVLVLALWGASEVGEVVRGGLGSLARGQQEAGLALGLSTWQLYRHVLLPQALQRL 147 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 PP + Y ++K SSLAV +G +++ VG II +T Sbjct: 148 TPPTINIYTRIIKTSSLAVLIGVVEVIKVGQQIIERT 184 >gi|56478021|ref|YP_159610.1| glutamate/aspartate ABC transporter transmembrane protein [Aromatoleum aromaticum EbN1] gi|56314064|emb|CAI08709.1| putative ABC transporter protein,probable glutamate/aspartate transmembrane subunit [Aromatoleum aromaticum EbN1] Length = 226 Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 41/127 (32%), Positives = 73/127 (57%) Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327 S Y + + AA+ +EI+RSG+ +VPRGQ+ A A+G T+ + RLV+LPQA R+++P L Sbjct: 98 SAYFTFTVFEAAYYSEIMRSGIQSVPRGQVAAGYAMGFTYGQTMRLVVLPQAFRNMLPVL 157 Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387 +Q + L ++ SL A+G D I + + +E+ +Y + ++ + Sbjct: 158 LTQTIILFQDVSLVYAIGATDFFGAADKITQRDLRPVEMYTTVAVVYFVICFTLSRLVKL 217 Query: 388 LNAKIAL 394 L ++IA+ Sbjct: 218 LQSRIAI 224 >gi|325970436|ref|YP_004246627.1| polar amino acid ABC transporter inner membrane subunit [Spirochaeta sp. Buddy] gi|324025674|gb|ADY12433.1| polar amino acid ABC transporter, inner membrane subunit [Spirochaeta sp. Buddy] Length = 221 Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 55/187 (29%), Positives = 97/187 (51%), Gaps = 18/187 (9%) Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249 FVF VLGI +R+ + L LYI + + +P L+ I L ++L Sbjct: 36 FVFGSVLGI---------ARYLGKGPAAKLAALYIDS--VRNIPLLLFI-LSFRLLLPSV 83 Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309 +LG S +A++ +T+A +AEI+R GL +P+GQ EAA + G + K Sbjct: 84 ILGI------RIPDKAVFSGIVAMTVFTSAMVAEILRGGLNGIPKGQWEAAASQGFSRYK 137 Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369 R ++ PQA+R I+ P+ Q++ LK++S VG ++L+ I+ + + ++IL+ Sbjct: 138 TLRYIIFPQALRKILVPMLGQFVTCLKDTSFLQVVGISELMMNATIIMGKFKYSYQVILL 197 Query: 370 WMFIYLS 376 + + L+ Sbjct: 198 YTLVALA 204 >gi|293603255|ref|ZP_06685686.1| glutamine ABC superfamily ATP binding cassette transporter, permease protein [Achromobacter piechaudii ATCC 43553] gi|292818344|gb|EFF77394.1| glutamine ABC superfamily ATP binding cassette transporter, permease protein [Achromobacter piechaudii ATCC 43553] Length = 238 Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 46/133 (34%), Positives = 76/133 (57%), Gaps = 16/133 (12%) Query: 227 FLIFGLPTLVLIALKY---QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283 +L+ GLP L+ I Y L +PV G + +AL CY +A++AE Sbjct: 66 YLVRGLPLLMFIFWAYFFVPLIIGRPVAGTTTMV-------------VALVCYESAYLAE 112 Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343 I+R+G+ A+P GQ EA+ ALGL++ + R V+LPQA+ +++P + SQ+++ +K +SLA Sbjct: 113 IIRAGIQALPPGQQEASRALGLSYMQTMRRVILPQALYNMLPSMLSQFVSTVKETSLAYV 172 Query: 344 VGFADLVSVGGTI 356 + +L I Sbjct: 173 ISVQELTYAANQI 185 >gi|229174829|ref|ZP_04302349.1| Arginine transport system permease protein artQ [Bacillus cereus MM3] gi|228608497|gb|EEK65799.1| Arginine transport system permease protein artQ [Bacillus cereus MM3] Length = 225 Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 53/206 (25%), Positives = 105/206 (50%), Gaps = 29/206 (14%) Query: 193 SFVLGIVLSLF------ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246 F+LG +L+L A ++ F+ + PL+ + FG+P ++ Y++ Sbjct: 39 GFILGTLLALCKIARIRALNIAADFYTSIFRGTPLVLQLMIIYFGVPQII----GYEI-- 92 Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306 P F++ +A S + A+++E++R+G+ AV +GQ EAA+ALG+ Sbjct: 93 -----------------PAFVAAVLAFSLNSGAYMSEVIRAGIQAVDKGQTEAAMALGIP 135 Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 + K R ++ PQA+++I+P L +++ L K S++ +G DL+ + +T + +E Sbjct: 136 YGKMMRNIIFPQALKNILPALVNEFATLTKESAVVTVIGATDLMRRAYIVGGETFKYLEP 195 Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKI 392 +L IY L I++ L + ++ Sbjct: 196 LLFVGLIYYMLVIILTLVGKAIEGRM 221 >gi|327461007|gb|EGF07340.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK1057] Length = 226 Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 41/118 (34%), Positives = 71/118 (60%), Gaps = 8/118 (6%) Query: 243 QLHFDKPVLGQF-------NFIGGSTVSPE-FMSLYIALSCYTAAFIAEIVRSGLIAVPR 294 + + + P+L QF + T+ P + + + + Y A+I+E++RSG+ ++PR Sbjct: 63 EFYQNTPLLVQFVIVFYGLPLVSNYTIMPSIYWTAVLCVGLYHGAYISEVIRSGIQSIPR 122 Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352 GQ EAA++ G T+ + R ++LPQA R I+PPL +Q +NL+KN+S + DL+ V Sbjct: 123 GQTEAALSQGFTYVETMRYIILPQAFRIILPPLINQVVNLIKNTSTVAIISGMDLMFV 180 >gi|319651467|ref|ZP_08005595.1| YqiY protein [Bacillus sp. 2_A_57_CT2] gi|317396782|gb|EFV77492.1| YqiY protein [Bacillus sp. 2_A_57_CT2] Length = 219 Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 59/184 (32%), Positives = 102/184 (55%), Gaps = 17/184 (9%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 + FVLGI+LS F ++SR K + Y S F G P ++ + L +++ P Sbjct: 31 ILGFVLGIILSFF--KISRF---KILGWIADAYTSVFR--GTPLVLQLML---IYYGSPQ 80 Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 L G + P ++ ++ +AA+I+EI+R+G++AV +GQ EAA+ALG+ +R A Sbjct: 81 LI------GYKIDPSTAAV-LSFGLNSAAYISEIIRAGILAVDKGQSEAAMALGVPYRPA 133 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370 ++LPQAM++I+P L ++++ L K S++ +G D++ + + E ILI Sbjct: 134 MMDIILPQAMKNILPALMNEFITLTKESAIVTVIGVTDVMRRAYIVGGEKFSYFEPILIA 193 Query: 371 MFIY 374 IY Sbjct: 194 GLIY 197 >gi|228960421|ref|ZP_04122073.1| Arginine transport system permease protein artQ [Bacillus thuringiensis serovar pakistani str. T13001] gi|229129433|ref|ZP_04258404.1| Arginine transport system permease protein artQ [Bacillus cereus BDRD-Cer4] gi|228654038|gb|EEL09905.1| Arginine transport system permease protein artQ [Bacillus cereus BDRD-Cer4] gi|228799282|gb|EEM46247.1| Arginine transport system permease protein artQ [Bacillus thuringiensis serovar pakistani str. T13001] Length = 222 Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 53/206 (25%), Positives = 105/206 (50%), Gaps = 29/206 (14%) Query: 193 SFVLGIVLSLF------ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246 F+LG +L+L A ++ F+ + PL+ + FG+P ++ Y++ Sbjct: 36 GFILGTLLALCKIARIRALNIAADFYTSIFRGTPLVLQLMIIYFGVPQII----GYEI-- 89 Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306 P F++ +A S + A+++E++R+G+ AV +GQ EAA+ALG+ Sbjct: 90 -----------------PAFLAAVLAFSLNSGAYMSEVIRAGIQAVDKGQTEAAMALGVP 132 Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 + K R ++ PQA+++I+P L +++ L K S++ +G DL+ + +T + +E Sbjct: 133 YGKMMRNIIFPQALKNILPALVNEFATLTKESAVVTVIGATDLMRRAYIVGGETFKYLEP 192 Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKI 392 +L IY L I++ L + ++ Sbjct: 193 LLFVGLIYYMLVIILTLVGKAIEGRM 218 >gi|156974645|ref|YP_001445552.1| hypothetical protein VIBHAR_02363 [Vibrio harveyi ATCC BAA-1116] gi|156526239|gb|ABU71325.1| hypothetical protein VIBHAR_02363 [Vibrio harveyi ATCC BAA-1116] Length = 365 Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 36/98 (36%), Positives = 66/98 (67%) Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315 F+ + + + + I + ++AA++AE+VR GL A+P+GQ EAA ALGL++ K L++ Sbjct: 220 FLAEGSETDKLIRALIGVVMFSAAYMAEVVRGGLQAIPKGQYEAADALGLSYWKKMGLII 279 Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353 LPQA++ IP + + ++ L K++SL + +G D++ +G Sbjct: 280 LPQALKITIPSIVNTFIGLFKDTSLVLIIGMFDVLGIG 317 >gi|1649036|gb|AAB49428.1| glutamine transport system permease [Salmonella enterica subsp. enterica serovar Typhimurium] Length = 219 Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 62/212 (29%), Positives = 114/212 (53%), Gaps = 14/212 (6%) Query: 186 NAKIFVFSFVLGIVLSL---FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY 242 AK+ ++ VLG+ L A +R F + L++I +I G P +V + Y Sbjct: 18 GAKMTLWISVLGLAGGLVIGLAAGFARTFGGWFANHIALVFIE--IIRGTPMVVQVMFIY 75 Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302 F P+ FN + + P F + + + + A+IAEI R ++++ +G EA +A Sbjct: 76 ---FALPM--AFNDL---RIDP-FSAAVVTIMINSGAYIAEITRGAVLSIHKGFREAGLA 126 Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362 LGL+ R+ R V+LP A+R ++PPL +Q++ +K++SL + +G A+L G II + Sbjct: 127 LGLSRRETIRHVILPLALRRMLPPLGNQWIISIKDTSLFIVIGVAELTRQGQEIIAGNFR 186 Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394 A+EI YL ++++++ + RL ++ + Sbjct: 187 ALEIWSAVAVFYLIITLVLSFILRRLEKRMKI 218 >gi|89902568|ref|YP_525039.1| amino acid ABC transporter permease [Rhodoferax ferrireducens T118] gi|89347305|gb|ABD71508.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Rhodoferax ferrireducens T118] Length = 255 Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 46/133 (34%), Positives = 78/133 (58%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+S IAL+ A+I+EI R+G+ ++ RGQ+EA+ +LGL+ + V+LPQA R ++P Sbjct: 123 FLSGVIALTLNAGAYISEIFRAGIQSIDRGQVEASRSLGLSFPRTMFHVVLPQAFRRMLP 182 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PL + ++LLK+SSL A+G A+L T+ + E L +Y L++ +A + Sbjct: 183 PLGNNAISLLKDSSLISAIGLAELAYAARTVAGAYSRYWEPYLTISLMYWVLTLGLAYVV 242 Query: 386 NRLNAKIALKEKK 398 L A+ + + Sbjct: 243 KNLEARYGRGDTR 255 >gi|312868069|ref|ZP_07728273.1| ABC transporter, permease protein [Streptococcus parasanguinis F0405] gi|311096473|gb|EFQ54713.1| ABC transporter, permease protein [Streptococcus parasanguinis F0405] Length = 230 Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 65/234 (27%), Positives = 114/234 (48%), Gaps = 32/234 (13%) Query: 179 PTLTMDTNA--KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST---------- 226 PTL A + V + VLG L T ++ +K G L Y+ T Sbjct: 14 PTLVQALPATLALMVLTTVLGSAFGLVLT-WAQVSEDKVGAGLAKGYVFTLRCTPPIVLL 72 Query: 227 FLIF-GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285 FL+F GLP L + L D +F F+ +A+ AA I+E+ Sbjct: 73 FLVFYGLPQF----LNWWLGIDIDHWSKFVFV------------LVAMFLLFAAMISEVF 116 Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345 ++ +A+P+GQMEA +++GLT + ++LPQA R +P +T+ LNL+++++LA +G Sbjct: 117 KAAYLAIPKGQMEAGLSIGLTPAQTIWRIVLPQAFRVALPNMTTAILNLMRDAALAYTIG 176 Query: 346 FADLVSVGGTII--NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 F D++ G +I N ++E IY ++++I+ L ++++ E+ Sbjct: 177 FIDIMGAGNNLISRNLGNYSLETYTAVAVIYWGIALVISFSAQLLEKRLSVTER 230 >gi|228474812|ref|ZP_04059543.1| L-cystine transport system permease protein TcyB [Staphylococcus hominis SK119] gi|228271475|gb|EEK12843.1| L-cystine transport system permease protein TcyB [Staphylococcus hominis SK119] Length = 239 Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 52/155 (33%), Positives = 94/155 (60%), Gaps = 10/155 (6%) Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248 I + +F+LG++++LF T L R K + + +Y+S +I G P +V + + + + Sbjct: 34 ITIVTFILGLIIALF-TALMRISSSKVLRGIARVYVS--IIRGTPMIVQL---FIIFYGI 87 Query: 249 PVLGQF---NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305 P LG+ N T+S +S I LS A+ +EI+R G+I++P+GQ EAA ++G+ Sbjct: 88 PELGRLITGNADEQWTLS-SVVSAIIGLSLNVGAYASEIIRGGIISIPKGQTEAAYSIGM 146 Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340 +R+ + ++LPQA+R +P L + +L L+K++SL Sbjct: 147 NYRQTIQRIILPQAIRVSVPALGNTFLGLIKDTSL 181 >gi|262041102|ref|ZP_06014320.1| glutamine ABC superfamily ATP binding cassette transporter, permease protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|259041552|gb|EEW42605.1| glutamine ABC superfamily ATP binding cassette transporter, permease protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 199 Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 42/129 (32%), Positives = 80/129 (62%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + + + + A+IAEI R ++++ +G EA +ALGL+ R+ R V+LP A+R ++P Sbjct: 70 FSAAVVTIMINSGAYIAEITRGAVLSIHKGFREAGLALGLSRRETIRHVILPLALRRMLP 129 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PL +Q++ +K++SL + +G A+L G II +A+EI IYL ++++++ + Sbjct: 130 PLGNQWIISIKDTSLFIVIGVAELTRQGQEIIAGNFRALEIWSAVAVIYLIITLVLSFIL 189 Query: 386 NRLNAKIAL 394 RL ++ + Sbjct: 190 RRLERRMKI 198 >gi|297567747|ref|YP_003686718.1| hypothetical protein Mesil_3399 [Meiothermus silvanus DSM 9946] gi|296852196|gb|ADH65210.1| hypothetical protein Mesil_3399 [Meiothermus silvanus DSM 9946] Length = 363 Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 43/118 (36%), Positives = 70/118 (59%), Gaps = 3/118 (2%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P+ + + + + AA++AE VR GL AVP+GQ EAA ALGL V+LPQA+R++ Sbjct: 227 PQVLRAIVGFTLFAAAYLAENVRGGLQAVPQGQREAAYALGLNGFHTAYYVVLPQALRAV 286 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT---GQAIEIILIWMFIYLSLS 378 IP + Q++ L K++SL V +G DL+ + ++ + E+ L +YL++S Sbjct: 287 IPAIVGQFIALFKDTSLVVLIGLLDLLGMAQAVLANPLYLHREREVYLFLALVYLAVS 344 >gi|117164571|emb|CAJ88117.1| putative ABC transporter permease [Streptomyces ambofaciens ATCC 23877] Length = 334 Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 63/202 (31%), Positives = 103/202 (50%), Gaps = 24/202 (11%) Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248 + V F+LG VL++ RLS + +T L + ++ P LV + + + Sbjct: 88 VMVLGFLLGTVLAVM--RLSGNPVLRT-----LSWGYVWIFRSTPLLVQLLFWFNIGALY 140 Query: 249 PVLGQFNFIGGSTVSPEFMSLY------------IALSCYTAAFIAEIVRSGLIAVPRGQ 296 P LG G PEF+S+ I L+ + A+ AE+VR G+++V GQ Sbjct: 141 PTLGL-----GIPFGPEFVSVKTVNLLGPTLTAVIGLTLHETAYAAEVVRGGILSVDPGQ 195 Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356 EAA ALGL+ R+ R V++PQAMRSI+P + + LK +S+ + DL+ I Sbjct: 196 TEAAQALGLSRRRTLRRVVIPQAMRSIVPTAGNMLIGTLKGTSIVSVLAVHDLLYSVQLI 255 Query: 357 INQTGQAIEIILIWMFIYLSLS 378 NQT Q I ++++ Y++++ Sbjct: 256 YNQTYQVIPLLMVATLWYIAVT 277 >gi|51891626|ref|YP_074317.1| amino acid ABC transporter permease protein [Symbiobacterium thermophilum IAM 14863] gi|51855315|dbj|BAD39473.1| amino acid ABC transporter permease protein [Symbiobacterium thermophilum IAM 14863] Length = 219 Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 37/99 (37%), Positives = 62/99 (62%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +A++ +TAA + EIVR GL +V +GQ EAA + G T + + ++LPQA+R +IPPLT Q Sbjct: 90 LAMTLFTAAIVGEIVRGGLNSVDKGQWEAARSQGFTWWQTMQHIVLPQALRKMIPPLTGQ 149 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369 ++ ++K++S G +L G I+ + G ++ I Sbjct: 150 FITVVKDTSYVWVTGVQELTGKGVIILGKHGSTVQFFAI 188 >gi|323498375|ref|ZP_08103375.1| hypothetical protein VISI1226_13938 [Vibrio sinaloensis DSM 21326] gi|323316617|gb|EGA69628.1| hypothetical protein VISI1226_13938 [Vibrio sinaloensis DSM 21326] Length = 365 Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 36/98 (36%), Positives = 66/98 (67%) Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315 F+ + + + + I + ++AA++AE+VR GL A+P+GQ EAA ALGL++ K L++ Sbjct: 220 FLSEGSETDKLIRALIGVVMFSAAYMAEVVRGGLQAIPKGQYEAADALGLSYWKKMGLII 279 Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353 LPQA++ IP + + ++ L K++SL + +G D++ +G Sbjct: 280 LPQALKITIPSIVNTFIGLFKDTSLVLIIGMFDVLGIG 317 >gi|225174438|ref|ZP_03728437.1| polar amino acid ABC transporter, inner membrane subunit [Dethiobacter alkaliphilus AHT 1] gi|225170223|gb|EEG79018.1| polar amino acid ABC transporter, inner membrane subunit [Dethiobacter alkaliphilus AHT 1] Length = 219 Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 62/200 (31%), Positives = 110/200 (55%), Gaps = 17/200 (8%) Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252 FVLGI+ L R+S++ K AL Y+ +I G P LV I + ++F P+L Sbjct: 35 GFVLGILFGL--GRISKN---KIIFALSTTYVE--IIRGTPILVQI---FFIYFAMPIL- 83 Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312 +G + + A++ + A++AEIVR G+ ++ +GQ EA +G+T + R Sbjct: 84 ----LGSRISN--ITAAIAAIAINSGAYLAEIVRGGIQSIDKGQTEAGRTIGMTPFQTMR 137 Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372 ++ PQA + IIPP+ +Q++ LK++SL + ADL G TII +++EI Sbjct: 138 YIIWPQAFKRIIPPMGNQFIISLKDTSLLSVIAVADLTRRGQTIIAVNYRSVEIWGTVAL 197 Query: 373 IYLSLSIMIALFMNRLNAKI 392 +YL++++ I+ + R+ ++ Sbjct: 198 LYLTMTLTISFVLRRMERRL 217 Score = 44.3 bits (103), Expect = 0.033, Method: Compositional matrix adjust. Identities = 24/62 (38%), Positives = 35/62 (56%) Query: 88 AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147 A+L G T + G+ ++G L G GR+S NK++ + YVE+ R P LV IFF Sbjct: 16 ALLQGMWMTIMITVGGVALGFVLGILFGLGRISKNKIIFALSTTYVEIIRGTPILVQIFF 75 Query: 148 LY 149 +Y Sbjct: 76 IY 77 >gi|227875260|ref|ZP_03993402.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Mobiluncus mulieris ATCC 35243] gi|269978149|ref|ZP_06185099.1| probable amino-acid ABC transporter permease protein [Mobiluncus mulieris 28-1] gi|227844165|gb|EEJ54332.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Mobiluncus mulieris ATCC 35243] gi|269933658|gb|EEZ90242.1| probable amino-acid ABC transporter permease protein [Mobiluncus mulieris 28-1] Length = 217 Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 42/140 (30%), Positives = 81/140 (57%), Gaps = 3/140 (2%) Query: 256 FIGGSTVSPE--FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313 ++ G +S E F ++ IA + AA+ AEI R G A+P GQ EAA LG + R+ Sbjct: 75 YLFGVQISAEYRFYAVIIAFAINYAAYFAEIYRGGFQAIPAGQSEAAFVLGYSQRRTFFT 134 Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI 373 + +PQ R+++P +T++ + L+K++SLA A+ + ++ ++ + T + +F Sbjct: 135 IKVPQMFRTVLPSITNEVITLVKDTSLAFAISYTEMFTLAKQYASATASMAPFVAAAVFY 194 Query: 374 YLSLSIMIALFMNRLNAKIA 393 Y+ +I++A+ M+RL ++ Sbjct: 195 YV-FNIVVAVLMDRLEKHVS 213 >gi|89094511|ref|ZP_01167450.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Oceanospirillum sp. MED92] gi|89081247|gb|EAR60480.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Oceanospirillum sp. MED92] Length = 244 Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 54/156 (34%), Positives = 85/156 (54%), Gaps = 12/156 (7%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY----IA 272 +ALP YI F G P L+ I L Y QF FI S + P Y I Sbjct: 52 QALPFAYI--FFFRGTPLLIQIFLVYYGS------SQFEFIKNSALWPILREPYWCAIIT 103 Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 + +TAA+IAE++R + ++P+G++EAA ALG+++ R ++LP+A ++P ++ + Sbjct: 104 FALHTAAYIAELLRGAIQSIPKGEIEAAKALGMSYPMMLRRIILPRAFGIMMPAYGNEVI 163 Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368 +LK S+LA + DL + TII +T +EI L Sbjct: 164 LMLKGSALASTITLLDLTGMARTIIARTYTPLEIFL 199 >gi|323495725|ref|ZP_08100795.1| amino acid ABC transporter permease [Vibrio sinaloensis DSM 21326] gi|323319192|gb|EGA72133.1| amino acid ABC transporter permease [Vibrio sinaloensis DSM 21326] Length = 303 Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 45/141 (31%), Positives = 80/141 (56%) Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317 G + + +S + + ++A++AEIVRSGL + +GQ EAA +LGL+ R V+ P Sbjct: 163 GPAALWENLLSGVLCIGILSSAYVAEIVRSGLNNIEKGQWEAADSLGLSLWVKYRYVIAP 222 Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377 Q + +I P L Q ++L+K++S+ + ++ VG I N +G EI LI YL++ Sbjct: 223 QVLATITPALAGQAISLVKDTSIVSLISIQEMTFVGTEIANSSGLIFEIWLIVGLTYLAV 282 Query: 378 SIMIALFMNRLNAKIALKEKK 398 + ++LF +L + ++K Sbjct: 283 CLALSLFFRKLELRTLRHQRK 303 >gi|94986573|ref|YP_594506.1| ABC-type amino acid transport system, permease component [Lawsonia intracellularis PHE/MN1-00] gi|94730822|emb|CAJ54184.1| ABC-type amino acid transport system, permease component [Lawsonia intracellularis PHE/MN1-00] Length = 261 Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 53/172 (30%), Positives = 97/172 (56%), Gaps = 17/172 (9%) Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALS-CYTAAFIAEIVR 286 +I G+P LV QL + LG F SP +S IA++ CY A++ E+ R Sbjct: 103 VIRGIPLLV------QLFYIYYALGHF--------SP-LVSAIIAITFCY-GAYMGEVFR 146 Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346 +G++ VP+GQ EAA +LG + R V+LPQA+R+I+PP+ ++ + +LK++SL + Sbjct: 147 AGILTVPKGQEEAARSLGFNKYQTMRYVILPQALRAILPPIGNECIAMLKDTSLISIIAV 206 Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 ADL+ G T + E + +YL ++++++ ++ + K+ +++ Sbjct: 207 ADLLRRGREYAAVTFEYFETYTVIAIVYLIITLLLSKGVSIMEGKLDHYDQE 258 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 28/76 (36%), Positives = 42/76 (55%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151 G TF + F +I +G LVG GRLS N+++ + YVEV R IP LV +F++Y + Sbjct: 60 GIFVTFEVTFLSIICTLPLGLLVGFGRLSKNRIINILTSTYVEVIRGIPLLVQLFYIYYA 119 Query: 152 VLSVLPIPDHSIVLPF 167 + P+ I + F Sbjct: 120 LGHFSPLVSAIIAITF 135 >gi|319940984|ref|ZP_08015321.1| hypothetical protein HMPREF9464_00540 [Sutterella wadsworthensis 3_1_45B] gi|319805557|gb|EFW02352.1| hypothetical protein HMPREF9464_00540 [Sutterella wadsworthensis 3_1_45B] Length = 252 Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 39/126 (30%), Positives = 78/126 (61%) Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 A++ + A++ EI R+G+ ++ +GQMEAA +LG+++ +A R ++LPQA R ++P L + Sbjct: 123 AITLNSGAYMCEIFRAGIQSLDKGQMEAARSLGMSYMQAMRTIILPQAFRRMLPALGNNA 182 Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 + +LK+SSL A+G A+L T+ + + E + +Y +++++A + RL A+ Sbjct: 183 IAILKDSSLISAIGLAELAYAARTVAGASARYWEPYITISCVYWVMTLLLAWGIRRLEAR 242 Query: 392 IALKEK 397 + + Sbjct: 243 LGRGDN 248 >gi|6685719|sp|P72296|OCCM_RHIME RecName: Full=Octopine transport system permease protein occM gi|1519473|gb|AAB07519.1| OccM [Sinorhizobium meliloti] Length = 245 Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 65/204 (31%), Positives = 111/204 (54%), Gaps = 23/204 (11%) Query: 188 KIFVFSFVLGIVL--SLFATRLSRHFHEKTGKALPLLYISTFLIF---GLPTLVLIALKY 242 K+ VFS +G VL SL R+SR + L + + F IF G P LV I Y Sbjct: 24 KLAVFSIAVGTVLAFSLALMRVSRRWW--------LDFPARFYIFAFRGTPLLVQI---Y 72 Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYI----ALSCYTAAFIAEIVRSGLIAVPRGQME 298 +++ L QF + S + P Y AL+ TAA+ AEI+R GL++VP GQ+E Sbjct: 73 IIYYG---LSQFPGLRHSLLWPFLREAYWCALGALALNTAAYSAEIMRGGLLSVPAGQIE 129 Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN 358 AA A G+ R +++PQA+R ++P +++ + ++K++SLA + ++ + +I+ Sbjct: 130 AARACGMARVLLFRRIIIPQAIRQMLPGYSNEVVLMVKSTSLASTITLMEITGIAAKLIS 189 Query: 359 QTGQAIEIILIWMFIYLSLSIMIA 382 +T + +E+ IYL+++ + A Sbjct: 190 ETYRPVEVFACAGAIYLTMNFIAA 213 >gi|116619006|ref|YP_819377.1| ABC-type amino acid transport system, permease component [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] gi|116097853|gb|ABJ63004.1| amino acid ABC transporter membrane protein 2, PAAT family [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] Length = 219 Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 61/209 (29%), Positives = 101/209 (48%), Gaps = 35/209 (16%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPTLVLIALKYQL 244 + SF+ G ++ + +F + G + LPLL I F+ F LP K + Sbjct: 34 ILSFIAGSIIGIVQFERIPYFSKFVGTINNIIRNLPLLLIIFFVYFALP-------KLGI 86 Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304 H P F + +A+S + ++ +AEIVR GL ++ GQ E A A G Sbjct: 87 HL-----------------PIFWATVVAMSTFESSMLAEIVRGGLESIDEGQFEGARANG 129 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ-- 362 LT+ + ++LPQA + +IPP+ SQ ++L+K++SLA+ + A++ G I Q Sbjct: 130 LTNIQTMIYIVLPQAYKKMIPPIISQLISLVKDTSLAMGIVLAEMTYRGQIIYAQNSTYI 189 Query: 363 ---AIEIILIWMFIYLSLSIMIALFMNRL 388 I I L++ + LS++ F RL Sbjct: 190 IPVLIAITLVYFLLNYGLSLIAKWFDRRL 218 >gi|300871131|ref|YP_003786003.1| His/Glu/Gln/Arg/opine family amino acid ABC transporter permease [Brachyspira pilosicoli 95/1000] gi|300688831|gb|ADK31502.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Brachyspira pilosicoli 95/1000] Length = 205 Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 41/133 (30%), Positives = 77/133 (57%), Gaps = 1/133 (0%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P F S I AA++ EI R+G+ ++ +GQ EAA L L +R+ ++LPQA+R + Sbjct: 74 PAFTSAAITFVLNYAAYLMEIFRAGIESIDKGQYEAAYVLNLNYRQIMTRIILPQAIRKV 133 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 +PPL+++ +NL+K++SL + +G DL+ ++ + + I ++ + IYL + +I + Sbjct: 134 LPPLSNEAINLIKDTSLVIVLGIGDLMLYARQVLTRDFKLIPFVIAGI-IYLLFTFVIVV 192 Query: 384 FMNRLNAKIALKE 396 L K ++ Sbjct: 193 LFRNLEKKYVIRS 205 >gi|121606345|ref|YP_983674.1| polar amino acid ABC transporter inner membrane subunit [Polaromonas naphthalenivorans CJ2] gi|120595314|gb|ABM38753.1| amino acid ABC transporter membrane protein 2, PAAT family [Polaromonas naphthalenivorans CJ2] Length = 222 Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 46/136 (33%), Positives = 81/136 (59%), Gaps = 1/136 (0%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G + E +S I + AA+ +EIVR+G+ ++ RGQ+ A ALG+T+ + +L++LPQ Sbjct: 86 GRPIGAE-LSATITFVAFEAAYFSEIVRAGIQSISRGQVNAGRALGMTYAQNMKLIILPQ 144 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378 A R+++P L +Q + L +++SL A+G DL+ T G+ E L+ +Y L Sbjct: 145 AFRNMVPVLLTQTIILFQDTSLVYAIGAYDLLKGFTTAGKIYGRPEEAYLLAAVVYFVLC 204 Query: 379 IMIALFMNRLNAKIAL 394 ++ + RLN++IA+ Sbjct: 205 YSLSYMVKRLNSRIAI 220 >gi|269104575|ref|ZP_06157271.1| putative amino acid ABC transporter permease protein [Photobacterium damselae subsp. damselae CIP 102761] gi|268161215|gb|EEZ39712.1| putative amino acid ABC transporter permease protein [Photobacterium damselae subsp. damselae CIP 102761] Length = 319 Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 47/121 (38%), Positives = 74/121 (61%), Gaps = 4/121 (3%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I + +A+IAEI+RSG+ ++ +GQ EAA +LGLT + R V+ PQA S+IPPL Q Sbjct: 190 ICIGLLASAYIAEIIRSGIDSIEKGQWEAADSLGLTPLQRFRYVIFPQAFASVIPPLAGQ 249 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII----LIWMFIYLSLSIMIALFMN 386 +++++K+SS+ + +L VG I N +G EI L ++ + LSLSI+ + Sbjct: 250 FISIVKDSSIISLISIQELTFVGSEIANSSGYIFEIWILVGLAYLVLCLSLSILFSYLEK 309 Query: 387 R 387 R Sbjct: 310 R 310 >gi|49083678|gb|AAT51101.1| PA5075 [synthetic construct] Length = 321 Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 60/178 (33%), Positives = 97/178 (54%), Gaps = 23/178 (12%) Query: 193 SFVLGIVLSLFA--TRLSRH--FHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248 S +G+ + L A RLS++ H+ L +Y+ L+ G P LV I + Y F Sbjct: 132 SGAIGLAIGLVAGLCRLSKNPTLHD-----LSTIYVE--LVRGTPLLVQIFIFY--FFIG 182 Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308 VL +S EF + AL+ +T A++AEI+R+G+ ++ RGQ EAA +LGL Sbjct: 183 TVL---------NLSREFAGV-AALALFTGAYVAEIIRAGVQSIARGQNEAARSLGLNAG 232 Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 ++ R V+LPQA + ++PPL Q+++L+K++SL + +L G I + EI Sbjct: 233 QSMRYVILPQAFKRVLPPLAGQFISLVKDTSLVSVIAITELTKSGREAITTSFSTFEI 290 Score = 37.7 bits (86), Expect = 3.0, Method: Compositional matrix adjust. Identities = 31/101 (30%), Positives = 46/101 (45%), Gaps = 2/101 (1%) Query: 50 NNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAF-SGMIPAT 108 + EK +++ L G ++ +G + A +L G T WL+ SG I Sbjct: 79 ESGEKQVVTVAQDSLQFSEGDDVAEGDAVGVTRHWAAGPLLWGLWTTLWLSLVSGAI-GL 137 Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 IG + G RLS N + + +YVE+ R P LV IF Y Sbjct: 138 AIGLVAGLCRLSKNPTLHDLSTIYVELVRGTPLLVQIFIFY 178 >gi|257455729|ref|ZP_05620957.1| octopine transport system permease protein OccM [Enhydrobacter aerosaccus SK60] gi|257446857|gb|EEV21872.1| octopine transport system permease protein OccM [Enhydrobacter aerosaccus SK60] Length = 241 Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 68/206 (33%), Positives = 110/206 (53%), Gaps = 8/206 (3%) Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL-KYQLHF 246 ++ V S +LG +L++ L+R + +ALP YI F G P LV I L Y L Sbjct: 24 ELVVLSGLLGFMLAV-PLALARLSKKPWVQALPFAYI--FFFRGTPLLVQIFLIYYGLSQ 80 Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306 K V + G SP F IA + TAA+ AEI+R + ++P+G+ EAA A+G++ Sbjct: 81 FKWVTESVLWKSGVLASP-FWCAIIAFTLNTAAYTAEIIRGAIKSIPKGENEAADAIGMS 139 Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 + + R ++ P+A ++P ++ + +LK S+LA + D+ V TI+++T E+ Sbjct: 140 YSQKLRRIIFPRAFGIMLPAYGNEVIFMLKGSALASTITLMDITGVATTIMSKTYTVFEL 199 Query: 367 ILIWMFIYLSLS-IMIALFMNRLNAK 391 IYL LS ++I +F RL K Sbjct: 200 FFASGIIYLLLSWLLIGMF--RLAEK 223 >gi|255521708|ref|ZP_05388945.1| amino acid ABC transporter, permease protein [Listeria monocytogenes FSL J1-175] Length = 429 Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 63/193 (32%), Positives = 104/193 (53%), Gaps = 24/193 (12%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 +F F+LG++LSL R + L +YIS F G P +V + + + + P Sbjct: 33 IFGFILGVLLSL-----PRIYKIPVLDQLARVYISFFR--GTPIMVQL---FIVFYGIPA 82 Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCY---TAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307 L I S + P LY A++ Y +AA IAE++R+G+ +V GQ EAA ++GL+ Sbjct: 83 LSSIVGIDLSQMDP----LYAAIATYALSSAATIAEVIRAGVNSVDAGQAEAAYSIGLSS 138 Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367 R+ ++LPQA+ +P + + LK++SLA ++G D+ G T+I + A+E Sbjct: 139 RQTFLRIILPQALYQALPNFGNLVIGYLKDTSLAFSIGVMDMSGRGQTLITLSNHALE-- 196 Query: 368 LIWMFIYLSLSIM 380 +Y+SLSI+ Sbjct: 197 -----VYISLSII 204 Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 36/79 (45%), Positives = 50/79 (63%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IALS A++ EI+RSG+IAV GQMEAA ++G TH +A R VLLPQA +P T+ Sbjct: 349 IALSFTAGAYLTEILRSGIIAVDIGQMEAAYSVGYTHGQAIRKVLLPQAFMIALPNFTNL 408 Query: 331 YLNLLKNSSLAVAVGFADL 349 + L +S+A V ++ Sbjct: 409 CIGFLHTTSIAAIVAVPEI 427 >gi|218885964|ref|YP_002435285.1| polar amino acid ABC transporter inner membrane protein [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218756918|gb|ACL07817.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 263 Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 51/163 (31%), Positives = 93/163 (57%), Gaps = 16/163 (9%) Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290 G+P LV QL + LG+F + P+ ++ IALS A++ E+ R+G+ Sbjct: 108 GIPLLV------QLFYIYYALGRFLKV------PDLLAAIIALSVCYGAYMGEVFRAGID 155 Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 ++ +GQ EAA +LG + +V+LPQA R+I+PP+ ++++ +LK++SL + AD++ Sbjct: 156 SISKGQTEAARSLGFNRAETMFMVILPQAWRTILPPVGNEFIAMLKDTSLVSIIAVADIL 215 Query: 351 SVGGTIINQTGQAIE----IILIWMFIYLSLSIMIALFMNRLN 389 G +++ E + LI++ I L LS +++ +RLN Sbjct: 216 RRGREFASESFLYFETYTMVALIYLLITLFLSKGVSIMESRLN 258 Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust. Identities = 26/69 (37%), Positives = 40/69 (57%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151 G TF + ++ + IG + G GRLS N+L+ + YVEV R IP LV +F++Y + Sbjct: 62 GIAVTFKVTVLSILCSIPIGLITGLGRLSRNRLINLVASTYVEVVRGIPLLVQLFYIYYA 121 Query: 152 VLSVLPIPD 160 + L +PD Sbjct: 122 LGRFLKVPD 130 >gi|205375465|ref|ZP_03228253.1| amino acid ABC transporter ATP-binding protein [Bacillus coahuilensis m4-4] Length = 216 Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 42/133 (31%), Positives = 77/133 (57%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 +F S+ + L+ + A+IAEI+R + ++ +GQ EA +LG++ R ++LPQA R Sbjct: 84 SDFWSVAMGLAFHNGAYIAEILRGSIQSIDKGQREAGRSLGMSQGLTMRRIILPQAFRRA 143 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 +PPL +Q++ LK+SSLA +G +L +V T+ + + +LI YL L + Sbjct: 144 LPPLGNQFIIALKDSSLASFIGMYELFNVATTLGSNNFDNMTYLLIVSVYYLVLVYLFTF 203 Query: 384 FMNRLNAKIALKE 396 + RL ++++ + Sbjct: 204 IVQRLEKRMSISD 216 >gi|313110114|ref|ZP_07796016.1| putative amino acid ABC transporter, permease protein [Pseudomonas aeruginosa 39016] gi|310882518|gb|EFQ41112.1| putative amino acid ABC transporter, permease protein [Pseudomonas aeruginosa 39016] Length = 320 Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 59/174 (33%), Positives = 93/174 (53%), Gaps = 15/174 (8%) Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252 S +G+ + L A L R T L +Y+ L+ G P LV I + Y F VL Sbjct: 132 SGAIGLAIGLVAG-LCRLSENPTLHDLSTIYVE--LVRGTPLLVQIFIFY--FFIGTVL- 185 Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312 +S EF + AL+ +T A++AEI+R+G+ ++ RGQ EAA +LGL ++ R Sbjct: 186 --------NLSREFAGV-AALALFTGAYVAEIIRAGVQSIARGQNEAARSLGLNAGQSMR 236 Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 V+LPQA + ++PPL Q+++L+K++SL + +L G I + EI Sbjct: 237 YVILPQAFKRVLPPLAGQFISLVKDTSLVSVIAITELTKSGREAITTSFSTFEI 290 Score = 37.7 bits (86), Expect = 2.9, Method: Compositional matrix adjust. Identities = 31/98 (31%), Positives = 45/98 (45%), Gaps = 2/98 (2%) Query: 53 EKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAF-SGMIPATIIG 111 EK +++ L G ++ +G + A +L G T WL+ SG I IG Sbjct: 82 EKQVVTVAQDSLQFSEGDDVAEGDAVGVTRHWAAGPLLWGLWTTLWLSLVSGAI-GLAIG 140 Query: 112 TLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 + G RLS N + + +YVE+ R P LV IF Y Sbjct: 141 LVAGLCRLSENPTLHDLSTIYVELVRGTPLLVQIFIFY 178 >gi|157362892|ref|YP_001469659.1| polar amino acid ABC transporter, inner membrane subunit [Thermotoga lettingae TMO] gi|157313496|gb|ABV32595.1| polar amino acid ABC transporter, inner membrane subunit [Thermotoga lettingae TMO] Length = 222 Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 46/157 (29%), Positives = 83/157 (52%), Gaps = 8/157 (5%) Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301 Y +H+ P+L + + F S I S T A+I+EI+R GL ++ GQ EAA Sbjct: 72 YFVHYGLPIL--------NIMPTRFQSATITFSLNTGAYISEIIRGGLQSINIGQFEAAY 123 Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361 +LGL+ + RL++ PQ R ++PPL SQ+ L+K++SLA + +L + T Sbjct: 124 SLGLSRFQTIRLIIFPQLFRIVLPPLVSQFSYLIKDTSLAAVLTIPELTYMARRAAATTY 183 Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 + +E + M +Y ++ +++ N L + +++ Sbjct: 184 RPLESFIPPMLMYFAIYFILSFLSNTLEKHLQKNDQE 220 >gi|328464919|gb|EGF36207.1| amino acid ABC transporter permease protein [Lactobacillus helveticus MTCC 5463] Length = 537 Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 43/126 (34%), Positives = 78/126 (61%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I +S T A++AE++R G+I+ P GQ EAA ALG+TH + ++LPQA+++ +P +T++ Sbjct: 391 IIVSINTGAYLAEVIRGGIISTPEGQFEAASALGMTHNQKMWHIILPQAIKNCLPSITNE 450 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++ +K++S+ + ++L VG TI +Q+ + L+ IYL L+ I N + Sbjct: 451 FIVNIKDTSVLSIISVSELFFVGTTIASQSFKFFPTYLMISAIYLILTFTITRIFNFIEK 510 Query: 391 KIALKE 396 K+ K+ Sbjct: 511 KLEGKK 516 Score = 38.1 bits (87), Expect = 2.7, Method: Compositional matrix adjust. Identities = 29/93 (31%), Positives = 40/93 (43%), Gaps = 10/93 (10%) Query: 67 RAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVG----------A 116 +AG E + T+ Y I+ G T LA G + IG LVG Sbjct: 280 KAGNETKKENWLVTTWKQYGGMIMSGIGMTLLLALVGTVVGFFIGLLVGIVRTIPTPTTR 339 Query: 117 GRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 G+ A +V W+ VYVE+FR P +V +Y Sbjct: 340 GKRWALNVVKWLLSVYVEIFRGTPMMVQAAVIY 372 >gi|323358918|ref|YP_004225314.1| amino acid ABC transporter permease [Microbacterium testaceum StLB037] gi|323275289|dbj|BAJ75434.1| ABC-type amino acid transport system, permease component [Microbacterium testaceum StLB037] Length = 221 Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 64/211 (30%), Positives = 107/211 (50%), Gaps = 36/211 (17%) Query: 193 SFVLGIVLSLFAT--RLSRH--------FHEKTGKALPLLYISTFLIF-GLPTLVLIALK 241 SF +G+V++LF RLSR+ F+ + PLL + F+IF GLPT+ Sbjct: 30 SFAIGLVIALFMALLRLSRNVVLSGIARFYISIIRGTPLL-VQLFVIFYGLPTI------ 82 Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301 G T+ P F + IA S + AE++R+ +++VPRGQ EAA Sbjct: 83 -----------------GVTIDP-FPAAVIAFSLNVGGYAAEVIRAAILSVPRGQWEAAH 124 Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361 +GLT K ++LPQA R +PPL++ +++L+K+SSLA + ++L I + Sbjct: 125 TVGLTPTKTLTRIILPQAARVSVPPLSNTFISLVKDSSLASLILVSELFRQAQNIAAFSY 184 Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 + + + L IY ++++ N L ++ Sbjct: 185 EFMAVYLEAALIYWLFCLVLSFGQNALEKRL 215 >gi|13473260|ref|NP_104827.1| glutamine ABC transporter (integral membrane protein) [Mesorhizobium loti MAFF303099] gi|14024008|dbj|BAB50613.1| glutamine ABC transporter (integral membrane protein) [Mesorhizobium loti MAFF303099] Length = 216 Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 52/198 (26%), Positives = 96/198 (48%), Gaps = 24/198 (12%) Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFN 255 +G+V R + T + +P+L + F+ +GLP + LH Sbjct: 39 VGLVYGPAPLRWAVRIFSDTIRGIPILVLMFFVYYGLPAI-------GLHL--------- 82 Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315 P F + +AL+ + A + E +R + ++P+GQ EAA+A+GLT R+ V+ Sbjct: 83 --------PSFWAAVLALTLFKTAQVIEYLRGAVASIPKGQSEAAMAIGLTFRQRLTFVI 134 Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375 PQA R +PP + + +K S+L +G DL+ +I +T +A+ + ++ IY Sbjct: 135 FPQAFRRFLPPWINGVTDAVKGSALVSLLGITDLMQAINQVIGRTYEAMPLYILGALIYF 194 Query: 376 SLSIMIALFMNRLNAKIA 393 +++ ++L RL + A Sbjct: 195 AVNYALSLASRRLERRFA 212 Score = 37.7 bits (86), Expect = 2.8, Method: Compositional matrix adjust. Identities = 18/58 (31%), Positives = 32/58 (55%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 GF T W++ + + + G L+G G + + W R++ + R IP LV++FF+Y Sbjct: 15 GFAVTLWVSLLVVTLSLVAGVLLGVGLVYGPAPLRWAVRIFSDTIRGIPILVLMFFVY 72 >gi|217963554|ref|YP_002349232.1| L-cystine transport system permease protein TcyL [Listeria monocytogenes HCC23] gi|290893635|ref|ZP_06556617.1| amino acid ABC transporter [Listeria monocytogenes FSL J2-071] gi|217332824|gb|ACK38618.1| L-cystine transport system permease protein TcyL [Listeria monocytogenes HCC23] gi|290556837|gb|EFD90369.1| amino acid ABC transporter [Listeria monocytogenes FSL J2-071] gi|307571870|emb|CAR85049.1| polar amino acid ABC transporter, permease protein [Listeria monocytogenes L99] Length = 238 Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 67/211 (31%), Positives = 108/211 (51%), Gaps = 24/211 (11%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 +F F+LG++LSL R + L +YIS F G P +V + + + + P Sbjct: 33 IFGFILGVLLSL-----PRIYKIPVLDQLARVYISFFR--GTPIMVQL---FIVFYGIPA 82 Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCY---TAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307 L I S + P LY A++ Y +AA IAE++R+G+ +V GQ EAA ++GL Sbjct: 83 LSSIVGIDLSQMDP----LYAAIATYALSSAATIAEVIRAGVNSVDAGQTEAAYSVGLNG 138 Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367 R+ ++LPQA+ +P + + LK++SLA ++G D+ G T+I + A+E Sbjct: 139 RQTFLRIILPQALYQALPNFGNLVIGYLKDTSLAFSIGVMDMSGRGQTLITLSNHALE-- 196 Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 +Y+SLSI+ L L EK+ Sbjct: 197 -----VYISLSIIYYLTAVLLEYSFKWIEKR 222 >gi|126652699|ref|ZP_01724860.1| hypothetical protein BB14905_23073 [Bacillus sp. B14905] gi|126590548|gb|EAZ84666.1| hypothetical protein BB14905_23073 [Bacillus sp. B14905] Length = 234 Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 66/208 (31%), Positives = 111/208 (53%), Gaps = 15/208 (7%) Query: 179 PTLT--MDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV 236 PTL + A+I VFS + G+VL + + + + K L +YIS I G P LV Sbjct: 15 PTLLQYLPVTAEILVFSILFGMVLGIMLA-IPKLLNVAGLKQLITIYIS--FIRGTPILV 71 Query: 237 LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT---AAFIAEIVRSGLIAVP 293 + L + + P L + I + + ++Y + YT AA AEI R+ ++ V Sbjct: 72 QLFLVF---YGVPALLKLIHIDVTRMD----AMYFVIITYTLSNAAAFAEIFRAAILTVD 124 Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353 RGQMEAA ++GL+ +A ++ PQA+R P + + ++ LK++SLA ++G D+V G Sbjct: 125 RGQMEAAYSVGLSGPQAFLRIVFPQAIRVAFPNIANTMISSLKDTSLAFSIGVMDMVGRG 184 Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMI 381 +I T +A EI + +Y ++ I++ Sbjct: 185 EALIASTTRAFEIYVALSIVYFAIVIIL 212 >gi|146310955|ref|YP_001176029.1| glutamine ABC transporter permease protein [Enterobacter sp. 638] gi|145317831|gb|ABP59978.1| L-glutamine ABC transporter membrane protein [Enterobacter sp. 638] Length = 219 Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 59/206 (28%), Positives = 112/206 (54%), Gaps = 12/206 (5%) Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248 I V G+++ L A +R + + L++I +I G P +V + Y F Sbjct: 25 ISVLGLAGGLIIGLVAG-FARSYGGWIANHIALVFIE--VIRGTPIVVQVMFIY---FAL 78 Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308 P+ FN + + P F + + + + A+IAEI R ++++ +G EA +ALGL+ R Sbjct: 79 PM--AFNDL---RIDP-FSAAVVTIMINSGAYIAEITRGAVLSIHKGFSEAGLALGLSRR 132 Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368 + R V+LP A+R ++PPL +Q++ +K++SL + +G A+L G II +A+EI Sbjct: 133 ETIRHVILPLALRRMLPPLGNQWIISIKDTSLFIVIGVAELTRQGQEIIAGNFRALEIWS 192 Query: 369 IWMFIYLSLSIMIALFMNRLNAKIAL 394 +YL ++++++ + RL ++ + Sbjct: 193 AVAVVYLIITLLLSFVLRRLERRMKI 218 >gi|90578889|ref|ZP_01234699.1| putative ABC-type amino acid transport system, permease component [Vibrio angustum S14] gi|90439722|gb|EAS64903.1| putative ABC-type amino acid transport system, permease component [Vibrio angustum S14] Length = 365 Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 34/78 (43%), Positives = 58/78 (74%) Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335 ++AA++AE++R GL A+P+GQ EAA ALGLT+ K L++LPQA++ IP + + ++ L Sbjct: 240 FSAAYMAEVIRGGLQAIPKGQYEAADALGLTYWKKMYLIVLPQALKITIPSIVNTFIGLF 299 Query: 336 KNSSLAVAVGFADLVSVG 353 K++SL + +G D++ +G Sbjct: 300 KDTSLVLIIGMFDVLGIG 317 >gi|300716009|ref|YP_003740812.1| hypothetical protein EbC_14300 [Erwinia billingiae Eb661] gi|299061845|emb|CAX58961.1| uncharacterized protein [Erwinia billingiae Eb661] Length = 219 Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 60/206 (29%), Positives = 112/206 (54%), Gaps = 12/206 (5%) Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248 I V V G+++ L A +R + + + L++I LI G P +V + Y F Sbjct: 25 ISVLGLVGGLIIGLVAG-FARAYGGWISRNIALVFIE--LIRGTPIVVQVMFIY---FAL 78 Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308 P+ F + +S +++ I + A+IAEI R ++++ G EA +ALGL+ R Sbjct: 79 PM--AFTDLRIDPLSAAVVTIMIN----SGAYIAEITRGAVLSIHNGFREAGLALGLSRR 132 Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368 + R V++P A+R ++PPL +Q++ +K++SL + +G A+L G II +A+EI Sbjct: 133 ETLRYVIMPLALRRMLPPLGNQWIVSIKDTSLFIVIGVAELTRQGQEIIAGNFRALEIWS 192 Query: 369 IWMFIYLSLSIMIALFMNRLNAKIAL 394 IYL +++M++ + R+ ++ + Sbjct: 193 AVAVIYLFITLMLSFILRRIEKRMKI 218 >gi|152976559|ref|YP_001376076.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152025311|gb|ABS23081.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus cytotoxicus NVH 391-98] Length = 219 Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 40/129 (31%), Positives = 79/129 (61%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P F++ IA S + A+++E++R+G+ A+ +GQ EAAIALG+ + K R ++LPQA+++I Sbjct: 87 PAFLAAVIAFSLNSGAYMSEVIRAGIQAIDKGQTEAAIALGVPYGKMMRHIILPQALKNI 146 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 +P L +++ L K S++ +G DL+ + +T + +E +L +Y L I++ + Sbjct: 147 LPALVNEFATLTKESAVVTVIGATDLMRRAYIVGGETFKYLEPLLFVGLVYYILVIVLTV 206 Query: 384 FMNRLNAKI 392 + ++ Sbjct: 207 VGKAIEGRM 215 >gi|323492612|ref|ZP_08097756.1| hypothetical protein VIBR0546_00040 [Vibrio brasiliensis LMG 20546] gi|323312987|gb|EGA66107.1| hypothetical protein VIBR0546_00040 [Vibrio brasiliensis LMG 20546] Length = 365 Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 36/98 (36%), Positives = 66/98 (67%) Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315 F+ + + + + I + ++AA++AE+VR GL A+P+GQ EAA ALGL++ K L++ Sbjct: 220 FLSEGSETDKLIRALIGVVMFSAAYMAEVVRGGLQAIPKGQYEAADALGLSYWKKMGLII 279 Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353 LPQA++ IP + + ++ L K++SL + +G D++ +G Sbjct: 280 LPQALKITIPSIVNTFIGLFKDTSLVLIIGMFDVLGIG 317 >gi|260778550|ref|ZP_05887442.1| amino acid ABC transporter permease protein [Vibrio coralliilyticus ATCC BAA-450] gi|260604714|gb|EEX31009.1| amino acid ABC transporter permease protein [Vibrio coralliilyticus ATCC BAA-450] Length = 365 Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 36/98 (36%), Positives = 66/98 (67%) Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315 F+ + + + + I + ++AA++AE+VR GL A+P+GQ EAA ALGL++ K L++ Sbjct: 220 FLAEGSETDKLIRALIGVVMFSAAYMAEVVRGGLQAIPKGQYEAADALGLSYWKKMGLIV 279 Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353 LPQA++ IP + + ++ L K++SL + +G D++ +G Sbjct: 280 LPQALKITIPSIVNTFIGLFKDTSLVLIIGMFDVLGIG 317 >gi|239944757|ref|ZP_04696694.1| putative glutamate ABC transporter permease protein [Streptomyces roseosporus NRRL 15998] gi|239991222|ref|ZP_04711886.1| putative glutamate ABC transporter permease protein [Streptomyces roseosporus NRRL 11379] gi|291448219|ref|ZP_06587609.1| glutamate transporter permease [Streptomyces roseosporus NRRL 15998] gi|291351166|gb|EFE78070.1| glutamate transporter permease [Streptomyces roseosporus NRRL 15998] Length = 215 Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 46/113 (40%), Positives = 74/113 (65%), Gaps = 2/113 (1%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +AL YT++F+ E VRSG+ VP GQ EAA ++G+T + ++V+LPQA R++IPPL+S Sbjct: 90 LALGFYTSSFVCEAVRSGINTVPLGQAEAARSIGMTFAQTLQIVVLPQATRTVIPPLSSI 149 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI-YLSLSIMIA 382 ++ L KNS++A A A+L +++ G I + IW+ I YL ++ I+ Sbjct: 150 FIALTKNSAIAGAFSNAELFG-WQKLMSDKGYDIVPVFIWVAIGYLIITFTIS 201 >gi|213418515|ref|ZP_03351581.1| glutamine ABC transporter permease protein [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 217 Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 62/212 (29%), Positives = 114/212 (53%), Gaps = 14/212 (6%) Query: 186 NAKIFVFSFVLGIVLSL---FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY 242 AK+ ++ VLG+ L A +R F + L++I +I G P +V + Y Sbjct: 16 GAKMTLWISVLGLAGGLVIGLAAGFARTFGGWFANHIALVFIE--IIRGTPIVVQVMFIY 73 Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302 F P+ FN + + P F + + + + A+IAEI R ++++ +G EA +A Sbjct: 74 ---FALPM--AFNDL---RIDP-FSAAVVTIMINSGAYIAEITRGAVLSIHKGFREAGLA 124 Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362 LGL+ R+ R V+LP A+R ++PPL +Q++ +K++SL + +G A+L G II + Sbjct: 125 LGLSRRETIRHVILPLALRRMLPPLGNQWIISIKDTSLFIVIGVAELTRQGQEIIAGNFR 184 Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394 A+EI YL ++++++ + RL ++ + Sbjct: 185 ALEIWSAVAVFYLIITLVLSFILRRLERRMKI 216 >gi|308186179|ref|YP_003930310.1| glutamine transport system permease protein glnP [Pantoea vagans C9-1] gi|308056689|gb|ADO08861.1| Glutamine transport system permease protein glnP [Pantoea vagans C9-1] Length = 219 Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 40/129 (31%), Positives = 80/129 (62%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + + + + A+IAEI R ++++ +G EA +ALGL+ R+ R V++P A+R ++P Sbjct: 90 FTAAVVTIMINSGAYIAEITRGAVLSINKGFREAGLALGLSSRETLRYVIMPLALRRMLP 149 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PL +Q++ +K++SL + +G A+L G II +A+EI IYL ++++++ + Sbjct: 150 PLGNQWIVSIKDTSLFIVIGVAELTRQGQEIIAGNFRALEIWSAVAIIYLVITLVLSFVL 209 Query: 386 NRLNAKIAL 394 R+ ++ + Sbjct: 210 RRIEKRVKI 218 >gi|261251729|ref|ZP_05944303.1| amino acid ABC transporter permease protein [Vibrio orientalis CIP 102891] gi|260938602|gb|EEX94590.1| amino acid ABC transporter permease protein [Vibrio orientalis CIP 102891] Length = 303 Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 46/145 (31%), Positives = 79/145 (54%), Gaps = 5/145 (3%) Query: 252 GQFNFI-----GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306 G N I G + + +S + + ++A++AE+VRSGL ++PRGQ EAA +LGL+ Sbjct: 152 GNLNVIQSVLFGPANLWENILSGILCVGLLSSAYVAEVVRSGLTSIPRGQWEAADSLGLS 211 Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 R V+ PQ + +I P L Q ++L+K++S+ + ++ VG + N +G EI Sbjct: 212 AWVKYRYVIAPQVLAAITPALAGQAISLVKDTSIVSLISIQEMTFVGTEMANSSGLIFEI 271 Query: 367 ILIWMFIYLSLSIMIALFMNRLNAK 391 LI YL L + ++ R+ + Sbjct: 272 WLIVGLAYLVLCLTLSFIFKRIEKR 296 >gi|317052938|ref|YP_004119292.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea sp. At-9b] gi|316953265|gb|ADU72736.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea sp. At-9b] Length = 223 Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 53/191 (27%), Positives = 103/191 (53%), Gaps = 12/191 (6%) Query: 215 TGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGS-------TVSPEFM 267 G L ++ S+ +P +VLI + + P + F +I + T+SP F Sbjct: 38 AGMVLAIMKNSSLRSLRIPAMVLIGF----YRNTPAIVHFFWIYYALPVISPLTLSP-FA 92 Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327 + +ALS +AAF AE+ R G+ ++ GQ E A ALG+ A R ++ PQA+R +IPP Sbjct: 93 AAVLALSAQSAAFYAEVYRGGIQSISAGQWEGAKALGMPRSTALRRIIFPQALRRMIPPF 152 Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387 + LLK+++LA ++ +++L+ + +QT + +E+ + +Y +L ++I+ Sbjct: 153 LERSFELLKSTALASSLAYSELLYQAMQVNSQTYRPLEVYSVIAVMYFTLLLIISQCSQV 212 Query: 388 LNAKIALKEKK 398 + ++A+ + + Sbjct: 213 IEKRLAVSDVR 223 >gi|227548107|ref|ZP_03978156.1| ABC superfamily ATP binding cassette transporter [Corynebacterium lipophiloflavum DSM 44291] gi|227079833|gb|EEI17796.1| ABC superfamily ATP binding cassette transporter [Corynebacterium lipophiloflavum DSM 44291] Length = 309 Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 40/85 (47%), Positives = 61/85 (71%) Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322 S F+ + L+ AA++AEIVRSG+ +VP GQ+EA+ ALG++ + + +LPQAMR Sbjct: 141 SSAFLLAVVGLALNEAAYMAEIVRSGVSSVPEGQIEASKALGMSWSQTMKRTVLPQAMRI 200 Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFA 347 IIPP +++++LLK SSL VAV ++ Sbjct: 201 IIPPTGNEFISLLKTSSLVVAVPYS 225 >gi|260102128|ref|ZP_05752365.1| His/Glu/Gln/Arg/opine amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus helveticus DSM 20075] gi|260084018|gb|EEW68138.1| His/Glu/Gln/Arg/opine amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus helveticus DSM 20075] Length = 546 Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 43/126 (34%), Positives = 78/126 (61%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I +S T A++AE++R G+I+ P GQ EAA ALG+TH + ++LPQA+++ +P +T++ Sbjct: 400 IIVSINTGAYLAEVIRGGIISTPEGQFEAASALGMTHNQKMWHIILPQAIKNCLPSITNE 459 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++ +K++S+ + ++L VG TI +Q+ + L+ IYL L+ I N + Sbjct: 460 FIVNIKDTSVLSIISVSELFFVGTTIASQSFKFFPTYLMISAIYLILTFTITRIFNFIEK 519 Query: 391 KIALKE 396 K+ K+ Sbjct: 520 KLEGKK 525 Score = 38.1 bits (87), Expect = 2.4, Method: Compositional matrix adjust. Identities = 29/93 (31%), Positives = 40/93 (43%), Gaps = 10/93 (10%) Query: 67 RAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVG----------A 116 +AG E + T+ Y I+ G T LA G + IG LVG Sbjct: 289 KAGNETKKENWLVTTWKQYGGMIMSGIGMTLLLALVGTVVGFFIGLLVGIVRTIPTPTTR 348 Query: 117 GRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 G+ A +V W+ VYVE+FR P +V +Y Sbjct: 349 GKRWALNVVKWLLSVYVEIFRGTPMMVQAAVIY 381 >gi|10955057|ref|NP_059713.1| hypothetical protein pTi_041 [Agrobacterium tumefaciens] gi|33860188|sp|P35114|OCCM_AGRTU RecName: Full=Octopine transport system permease protein occM gi|154764|gb|AAA50515.1| transport protein [Agrobacterium tumefaciens] gi|496542|emb|CAA82984.1| OccM [Agrobacterium tumefaciens] gi|8572696|gb|AAF77142.1| occM [Agrobacterium tumefaciens] gi|81176504|gb|ABB59526.1| OccM [Agrobacterium tumefaciens] Length = 245 Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 66/204 (32%), Positives = 112/204 (54%), Gaps = 23/204 (11%) Query: 188 KIFVFSFVLGIVLS--LFATRLSRHFHEKTGKALPLLYISTFLIF---GLPTLVLIALKY 242 ++ VFS LG VL+ L R+SR + LP + F IF G P LV I Y Sbjct: 24 QLAVFSVALGTVLAFGLALMRVSRLWWLD----LP----ARFYIFAFRGTPLLVQI---Y 72 Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLY----IALSCYTAAFIAEIVRSGLIAVPRGQME 298 +++ L QF + S + P Y AL+ TAA+ AEI+R GL++VP GQ+E Sbjct: 73 IIYYG---LSQFPDVRHSFIWPFLRDAYWCAMAALALNTAAYTAEIMRGGLLSVPAGQIE 129 Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN 358 AA A G+ K R +++PQA+R ++P +++ + ++K++SLA + ++ + +I+ Sbjct: 130 AAKACGMGRVKLFRRIVIPQAIRQMLPGYSNEVILMVKSTSLASTITIMEITGIAAKLIS 189 Query: 359 QTGQAIEIILIWMFIYLSLSIMIA 382 ++ + +E+ IYL L+ ++A Sbjct: 190 ESYRTVEVFSCAGAIYLILNFIVA 213 >gi|296167082|ref|ZP_06849493.1| GlnQ protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295897572|gb|EFG77167.1| GlnQ protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 605 Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 67/212 (31%), Positives = 108/212 (50%), Gaps = 21/212 (9%) Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244 TN+ I V LG+VL++ R + T + GLP +V+I L Sbjct: 386 TNSAI-VIGLALGMVLAMAGISNRRWLRWPA-------RVYTDIFRGLPEVVIILLIG-- 435 Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304 +G +GG T + AL AA+I EI+RSG+ +V GQ+EA+ ALG Sbjct: 436 ------MGVGPLVGGLTNKNPYPLGIAALGLMAAAYIGEILRSGIQSVDPGQLEASRALG 489 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF----ADLVSVGGTIINQT 360 ++ A RLV++PQ +R ++P L +Q++ LLK S+L +G +L VG + QT Sbjct: 490 FSYPTAMRLVVVPQGIRRVLPALVNQFIGLLKASALVYFLGLIAEQRELFQVGRDLNAQT 549 Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 G ++ +F YL L+I + +N ++A++ Sbjct: 550 GSLSPLVAAGLF-YLILTIPLTHLVNYIDARL 580 >gi|295401072|ref|ZP_06811046.1| polar amino acid ABC transporter, inner membrane subunit [Geobacillus thermoglucosidasius C56-YS93] gi|294976865|gb|EFG52469.1| polar amino acid ABC transporter, inner membrane subunit [Geobacillus thermoglucosidasius C56-YS93] Length = 235 Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 64/207 (30%), Positives = 111/207 (53%), Gaps = 18/207 (8%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 V +F +G++L++ AT L+R K + + +Y+S I G P LV + + + + P Sbjct: 42 VITFAIGLILAI-ATALARISGVKALEIIARIYVSA--IRGTPLLVQL---FIIFYGLPN 95 Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 +G P F + I S A+ +EIVR+ ++++P+GQ EAA +LG+T +A Sbjct: 96 IG--------ITIPSFPAAIIGFSLNVGAYASEIVRAAILSIPKGQWEAAYSLGMTTGQA 147 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI----EI 366 R V+ PQA R IPPL++ +++L+K++SLA + +++ I + + + E Sbjct: 148 LRRVIFPQAARVSIPPLSNTFISLVKDTSLASLILVSEMFRKAQEIASTNYEFLLLYTEA 207 Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIA 393 +I+ I LSI+ RLN IA Sbjct: 208 AIIYWIICFLLSIVQNRIEERLNRYIA 234 >gi|254508776|ref|ZP_05120888.1| ABC-type amino acid transport system, permease component [Vibrio parahaemolyticus 16] gi|219548296|gb|EED25309.1| ABC-type amino acid transport system, permease component [Vibrio parahaemolyticus 16] Length = 365 Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 36/98 (36%), Positives = 66/98 (67%) Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315 F+ + + + + I + ++AA++AE+VR GL A+P+GQ EAA ALGL++ K L++ Sbjct: 220 FLSEGSETDKLIRALIGVVMFSAAYMAEVVRGGLQAIPKGQYEAADALGLSYWKKMGLII 279 Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353 LPQA++ IP + + ++ L K++SL + +G D++ +G Sbjct: 280 LPQALKITIPSIVNTFIGLFKDTSLVLIIGMFDVLGIG 317 >gi|152998390|ref|YP_001343225.1| polar amino acid ABC transporter inner membrane subunit [Marinomonas sp. MWYL1] gi|150839314|gb|ABR73290.1| polar amino acid ABC transporter, inner membrane subunit [Marinomonas sp. MWYL1] Length = 366 Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 63/218 (28%), Positives = 107/218 (49%), Gaps = 32/218 (14%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA-------LKYQ 243 V SF LGIVL+L R K++ +++I T L T++ +A L Sbjct: 170 VASFPLGIVLAL-----GRRSEMPIAKSVCVVFIETIRAVPLITILFMASVMIPLFLPEG 224 Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 L+F+K + + I ++ ++AA++AE+VR GL A+P+GQ EAA A+ Sbjct: 225 LNFNK-----------------LLRVLIGITLFSAAYMAEVVRGGLQAIPKGQYEAADAM 267 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL---VSVGGTIINQT 360 GLT+ ++ LV+LPQA++ +IP + + ++ L K+++L VG D + N Sbjct: 268 GLTYWQSMILVILPQALKLVIPGIVNSFIALFKDTTLVYIVGMFDFLGRIQAANHDSNWL 327 Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 G IE IY + ++ + L K+ K+ Sbjct: 328 GTTIEGYAFAALIYWVICFGMSRYSMALERKLETGHKR 365 >gi|22536670|ref|NP_687521.1| amino acid ABC transporter, permease protein [Streptococcus agalactiae 2603V/R] gi|25010606|ref|NP_735001.1| hypothetical protein gbs0537 [Streptococcus agalactiae NEM316] gi|76787397|ref|YP_329224.1| polar amino acid ABC transporter permease [Streptococcus agalactiae A909] gi|22533510|gb|AAM99393.1|AE014214_7 amino acid ABC transporter, permease protein [Streptococcus agalactiae 2603V/R] gi|23094959|emb|CAD46181.1| unknown [Streptococcus agalactiae NEM316] gi|76562454|gb|ABA45038.1| polar amino acid uptake (PAAT) family ABC transporter, permease protein [Streptococcus agalactiae A909] gi|319744567|gb|EFV96920.1| amino acid ABC superfamily ATP binding cassette transporter, permease protein [Streptococcus agalactiae ATCC 13813] Length = 230 Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 39/119 (32%), Positives = 76/119 (63%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I +S + A+I+EIVR+G+ AVP GQ+EAA +LG+ + R V+LPQA ++I+P L ++ Sbjct: 101 IIISLNSGAYISEIVRAGIEAVPSGQIEAAYSLGIRPKNTLRYVILPQAFKNILPALGNE 160 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 ++ ++K+S+L +G +L + +++ T + +L F YL L+ +++ + ++ Sbjct: 161 FITIIKDSALLQTIGVMELWNGAQSVVTATYSPVAPLLFAAFYYLMLTTILSALLKQME 219 >gi|237798050|ref|ZP_04586511.1| amino acid ABC transporter permease [Pseudomonas syringae pv. oryzae str. 1_6] gi|331020901|gb|EGI00958.1| amino acid ABC transporter permease [Pseudomonas syringae pv. oryzae str. 1_6] Length = 222 Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 66/201 (32%), Positives = 103/201 (51%), Gaps = 18/201 (8%) Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251 F VLG L+L RLSR K L +Y+S F G P LV + L Y + P L Sbjct: 33 FGLVLGFGLALM--RLSRF---KPVNWLARIYVSFFR--GTPLLVQLFLIY---YGLPEL 82 Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311 G + P +L I S AA+ EI+RS + ++ RGQ EAA ++G+T + Sbjct: 83 G-------IELDPLTAAL-IGFSLNMAAYACEILRSAIGSIERGQWEAAASIGMTRWQTL 134 Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371 R +LPQA R+ +PPL + +++L+K+++LA + +L I +T + + L Sbjct: 135 RRAILPQAARTALPPLGNSFISLVKDTALAATIQVPELFRQAQLITARTFEIFTMYLAAA 194 Query: 372 FIYLSLSIMIALFMNRLNAKI 392 IY L+ ++ NRL A++ Sbjct: 195 LIYWILATALSYLQNRLEARV 215 Score = 40.8 bits (94), Expect = 0.42, Method: Compositional matrix adjust. Identities = 23/61 (37%), Positives = 33/61 (54%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G T +L+ GM ++G + RLS K V W+ R+YV FR P LV +F + Sbjct: 16 LLKGAYYTVFLSLGGMFFGLVLGFGLALMRLSRFKPVNWLARIYVSFFRGTPLLVQLFLI 75 Query: 149 Y 149 Y Sbjct: 76 Y 76 >gi|116254868|ref|YP_770704.1| putative permease component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] gi|115259516|emb|CAK10654.1| putative permease component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] Length = 235 Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 45/111 (40%), Positives = 69/111 (62%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I L AA+ +E +RSG+ +V GQM+AA ALG + A R V++PQ +R+ +PPL + Sbjct: 106 IGLGLCQAAYFSEDLRSGVRSVSPGQMQAARALGHGYVSAMRFVIMPQGVRNALPPLINH 165 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 ++L KNSSLAV +G ++L I N + + E+ LI +YL S++I Sbjct: 166 SVSLFKNSSLAVVIGASELTHAVKEIENLSFRTFEVYLIGTVLYLFFSLVI 216 >gi|163938357|ref|YP_001643241.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus weihenstephanensis KBAB4] gi|163860554|gb|ABY41613.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus weihenstephanensis KBAB4] Length = 230 Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 46/128 (35%), Positives = 75/128 (58%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IAL+ + A+I EI R + +V RGQ+EAA +LG+ + A R ++LPQA R +PPL +Q Sbjct: 89 IALAIHNGAYITEIFRGSIQSVDRGQLEAARSLGMPYPLAMRRIILPQAFRLSLPPLGNQ 148 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++ LK+SSL VG ++L G +I Q ++ +I YL+L ++ ++ L Sbjct: 149 FIIGLKDSSLVAYVGMSELWGSGLSIAAGNFQQLDTYIIVGVYYLALVLLFTYLVSLLEK 208 Query: 391 KIALKEKK 398 ++ KE Sbjct: 209 RLQRKENN 216 >gi|302188037|ref|ZP_07264710.1| polar amino acid ABC transporter, inner membrane subunit [Pseudomonas syringae pv. syringae 642] Length = 218 Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 43/123 (34%), Positives = 75/123 (60%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +AL TAA+ +EI+R GL AVP GQ EAA+ LGL A R+V++PQAMR +PPL Sbjct: 93 LALGWSTAAYTSEIIRGGLKAVPPGQREAAVTLGLAPATAMRIVIVPQAMRICLPPLLGF 152 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 L +L+ +SL + ++VS I + T Q + ++++ +Y ++ I + ++++ Sbjct: 153 ALVMLQTTSLCFTIALPEIVSRANEIGSATFQYMSVLMLTGLMYAAVCIPATIVVSQMER 212 Query: 391 KIA 393 +++ Sbjct: 213 RLS 215 >gi|253987652|ref|YP_003039008.1| amino acid ABC transporter permease [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253779102|emb|CAQ82262.1| similar to amino acid permease component of abc transporter [Photorhabdus asymbiotica] Length = 247 Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 58/223 (26%), Positives = 112/223 (50%), Gaps = 11/223 (4%) Query: 177 SFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV 236 +FP ++ A V S + G++ + T + G + LL +P ++ Sbjct: 17 TFPDGPLEGAALTLVISLIAGVISIVLGTVAGVALAMQKGFWVNLLAAVLGFFRAIPVIM 76 Query: 237 LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296 LI + +F PV+ PE ++ AL+ T+A++A V++G+IA+ GQ Sbjct: 77 LI---FWTYFLLPVMLGMEI-------PEITTVVCALALITSAYLAHGVKAGIIAIGAGQ 126 Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356 +A ++LG + ++LPQA+R ++P +Q++ L+K++SLA VG A+L + + Sbjct: 127 WQAGLSLGFNRWQVLWYIVLPQALRMMVPSFINQWIALIKDTSLAYIVGVAELSFLATQV 186 Query: 357 INQTG-QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 N++ E+ L FIY + + + L N + + +L+ +K Sbjct: 187 NNRSMVYPTEVFLFVAFIYFVMCLTLELAANYIARRFSLQRRK 229 >gi|152969396|ref|YP_001334505.1| glutamine ABC transporter permease protein [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|206580885|ref|YP_002239549.1| glutamine ABC transporter, permease protein [Klebsiella pneumoniae 342] gi|238893864|ref|YP_002918598.1| glutamine ABC transporter permease protein [Klebsiella pneumoniae NTUH-K2044] gi|288936394|ref|YP_003440453.1| polar amino acid ABC transporter inner membrane subunit [Klebsiella variicola At-22] gi|290510551|ref|ZP_06549921.1| glutamine ABC transporter permease [Klebsiella sp. 1_1_55] gi|330010080|ref|ZP_08306679.1| glutamine ABC transporter permease protein [Klebsiella sp. MS 92-3] gi|150954245|gb|ABR76275.1| glutamine ABC transporter permease component [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|206569943|gb|ACI11719.1| glutamine ABC transporter, permease protein [Klebsiella pneumoniae 342] gi|238546180|dbj|BAH62531.1| glutamine ABC transport system permease component [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] gi|288891103|gb|ADC59421.1| polar amino acid ABC transporter, inner membrane subunit [Klebsiella variicola At-22] gi|289777267|gb|EFD85265.1| glutamine ABC transporter permease [Klebsiella sp. 1_1_55] gi|328534631|gb|EGF61205.1| glutamine ABC transporter permease protein [Klebsiella sp. MS 92-3] Length = 219 Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 42/129 (32%), Positives = 80/129 (62%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + + + + A+IAEI R ++++ +G EA +ALGL+ R+ R V+LP A+R ++P Sbjct: 90 FSAAVVTIMINSGAYIAEITRGAVLSIHKGFREAGLALGLSRRETIRHVILPLALRRMLP 149 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PL +Q++ +K++SL + +G A+L G II +A+EI IYL ++++++ + Sbjct: 150 PLGNQWIISIKDTSLFIVIGVAELTRQGQEIIAGNFRALEIWSAVAVIYLIITLVLSFIL 209 Query: 386 NRLNAKIAL 394 RL ++ + Sbjct: 210 RRLERRMKI 218 >gi|330446207|ref|ZP_08309859.1| amino ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328490398|dbj|GAA04356.1| amino ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 365 Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 34/78 (43%), Positives = 58/78 (74%) Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335 ++AA++AE++R GL A+P+GQ EAA ALGLT+ K L++LPQA++ IP + + ++ L Sbjct: 240 FSAAYMAEVIRGGLQAIPKGQYEAADALGLTYWKKMYLIVLPQALKITIPSIVNTFIGLF 299 Query: 336 KNSSLAVAVGFADLVSVG 353 K++SL + +G D++ +G Sbjct: 300 KDTSLVLIIGMFDVLGIG 317 >gi|327393260|dbj|BAK10682.1| glutamine ABC transporter permease protein GlnP [Pantoea ananatis AJ13355] Length = 219 Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 40/129 (31%), Positives = 80/129 (62%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + + + + A+IAEI R ++++ +G EA +ALGL+ R+ R V++P A+R ++P Sbjct: 90 FTAAVVTIMINSGAYIAEITRGAVLSINKGFREAGLALGLSSRETLRYVIMPLALRRMLP 149 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PL +Q++ +K++SL + +G A+L G II +A+EI IYL ++++++ + Sbjct: 150 PLGNQWIVSIKDTSLFIVIGVAELTRQGQEIIAGNFRALEIWSAVAIIYLVITLVLSFVL 209 Query: 386 NRLNAKIAL 394 R+ ++ + Sbjct: 210 RRIEKRVKI 218 >gi|302526371|ref|ZP_07278713.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces sp. AA4] gi|302435266|gb|EFL07082.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces sp. AA4] Length = 324 Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 71/220 (32%), Positives = 112/220 (50%), Gaps = 26/220 (11%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLL----YISTFLIFGLPTLVLI-------A 239 VF V GIVL+L RLS++ PLL + ++ +P +VL+ A Sbjct: 95 VFGLVGGIVLALL--RLSKN---------PLLQAVSWAYVWIFRSIPLIVLLLFLANVTA 143 Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299 L L P F + V F+ + LS AA+ AEIVR+G+++V +GQ+EA Sbjct: 144 LYSTLSLGIPFGPSFFSFSATDVLSFFVVAVLGLSLNEAAYAAEIVRAGVLSVDQGQLEA 203 Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN- 358 A ALGL + R ++LPQA R+I+P +Q + LLK +S+ +L V T + Sbjct: 204 AAALGLPRSRQYRRIILPQATRAIVPAYANQLIGLLKGTSVVYITSLLELFGVVETQAST 263 Query: 359 QTGQAIEIIL---IWMFIYLSLSIMIALFMNRLNAKIALK 395 +GQ I ++L +W I S+ +I ++ R ++ AL+ Sbjct: 264 NSGQIIPLLLVGTVWYIILTSVLSVIQYYVERFFSRGALR 303 >gi|225388954|ref|ZP_03758678.1| hypothetical protein CLOSTASPAR_02696 [Clostridium asparagiforme DSM 15981] gi|225044984|gb|EEG55230.1| hypothetical protein CLOSTASPAR_02696 [Clostridium asparagiforme DSM 15981] Length = 226 Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 48/128 (37%), Positives = 78/128 (60%), Gaps = 7/128 (5%) Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307 KP +N IGG++ + +ALS A++AEI+R G+ AV +GQMEAA +LGL + Sbjct: 82 KPYGFSWNAIGGASTAG-----MVALSLNAGAYMAEIIRGGIEAVDKGQMEAARSLGLPY 136 Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367 KA R ++LPQA R+++P + +Q++ LK++SL +G +L G I + A ++ Sbjct: 137 GKAMRKIILPQAFRTMMPSIINQFIITLKDTSLVSVIGPRELTQNGKIIAANS--ASLVM 194 Query: 368 LIWMFIYL 375 IW+ + L Sbjct: 195 PIWLSVAL 202 Score = 36.6 bits (83), Expect = 8.0, Method: Compositional matrix adjust. Identities = 21/72 (29%), Positives = 38/72 (52%), Gaps = 8/72 (11%) Query: 104 MIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSI 163 +I AT++GT+ G ++S ++ I +Y+++ R P +V +F +Y + SVL Sbjct: 29 LIAATVLGTIFGLFKVSGMGILKVIADIYIDIIRGTPLMVQVFIIYYGLGSVLK------ 82 Query: 164 VLPFGMFLNNRG 175 P+G N G Sbjct: 83 --PYGFSWNAIG 92 >gi|167769494|ref|ZP_02441547.1| hypothetical protein ANACOL_00828 [Anaerotruncus colihominis DSM 17241] gi|167668462|gb|EDS12592.1| hypothetical protein ANACOL_00828 [Anaerotruncus colihominis DSM 17241] Length = 205 Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 61/180 (33%), Positives = 95/180 (52%), Gaps = 25/180 (13%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 +F+ VLG++ LF H + K + YI ++ G+P +VL Sbjct: 14 IFATVLGLISCLFQIS-----HSRVLKFISQAYID--IMRGVPVMVL------------- 53 Query: 251 LGQFNFIGGSTVSPEFMSLYIA----LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306 F + G + MS IA LS A+++EI RSG+ AV GQMEAA +LGL Sbjct: 54 -AFFIYFGVTRALDVRMSAEIAGILTLSLNAGAYLSEIFRSGIQAVNIGQMEAARSLGLP 112 Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 + +A R V+LPQA+R +IP + +Q++ LK++S+ A+G +L G II + ++ EI Sbjct: 113 YGRAMRKVILPQAVRIVIPSMVNQFIITLKDTSILYAIGMPELTQAGSLIIARNFRSFEI 172 >gi|15600268|ref|NP_253762.1| permease of ABC transporter [Pseudomonas aeruginosa PAO1] gi|107104174|ref|ZP_01368092.1| hypothetical protein PaerPA_01005247 [Pseudomonas aeruginosa PACS2] gi|116053222|ref|YP_793544.1| ABC transporter permease [Pseudomonas aeruginosa UCBPP-PA14] gi|218894174|ref|YP_002443043.1| putative permease of ABC transporter [Pseudomonas aeruginosa LESB58] gi|254238218|ref|ZP_04931541.1| hypothetical protein PACG_04344 [Pseudomonas aeruginosa C3719] gi|254244043|ref|ZP_04937365.1| hypothetical protein PA2G_04877 [Pseudomonas aeruginosa 2192] gi|296391925|ref|ZP_06881400.1| putative permease of ABC transporter [Pseudomonas aeruginosa PAb1] gi|9951368|gb|AAG08460.1|AE004920_10 probable permease of ABC transporter [Pseudomonas aeruginosa PAO1] gi|115588443|gb|ABJ14458.1| putative amino acid ABC transporter, permease protein [Pseudomonas aeruginosa UCBPP-PA14] gi|126170149|gb|EAZ55660.1| hypothetical protein PACG_04344 [Pseudomonas aeruginosa C3719] gi|126197421|gb|EAZ61484.1| hypothetical protein PA2G_04877 [Pseudomonas aeruginosa 2192] gi|218774402|emb|CAW30219.1| probable permease of ABC transporter [Pseudomonas aeruginosa LESB58] Length = 320 Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 60/178 (33%), Positives = 97/178 (54%), Gaps = 23/178 (12%) Query: 193 SFVLGIVLSLFA--TRLSRH--FHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248 S +G+ + L A RLS++ H+ L +Y+ L+ G P LV I + Y F Sbjct: 132 SGAIGLAIGLVAGLCRLSKNPTLHD-----LSTIYVE--LVRGTPLLVQIFIFY--FFIG 182 Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308 VL +S EF + AL+ +T A++AEI+R+G+ ++ RGQ EAA +LGL Sbjct: 183 TVL---------NLSREFAGV-AALALFTGAYVAEIIRAGVQSIARGQNEAARSLGLNAG 232 Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 ++ R V+LPQA + ++PPL Q+++L+K++SL + +L G I + EI Sbjct: 233 QSMRYVILPQAFKRVLPPLAGQFISLVKDTSLVSVIAITELTKSGREAITTSFSTFEI 290 Score = 37.7 bits (86), Expect = 3.0, Method: Compositional matrix adjust. Identities = 28/97 (28%), Positives = 42/97 (43%) Query: 53 EKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGT 112 EK +++ L G ++ +G + A +L G T WL+ IG Sbjct: 82 EKQVVTVAQDSLQFSEGDDVAEGDAVGVTRHWAAGPLLWGLWTTLWLSLVSGAIGLAIGL 141 Query: 113 LVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 + G RLS N + + +YVE+ R P LV IF Y Sbjct: 142 VAGLCRLSKNPTLHDLSTIYVELVRGTPLLVQIFIFY 178 >gi|322390821|ref|ZP_08064331.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus parasanguinis ATCC 903] gi|321142491|gb|EFX37959.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus parasanguinis ATCC 903] Length = 230 Score = 80.1 bits (196), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 65/234 (27%), Positives = 114/234 (48%), Gaps = 32/234 (13%) Query: 179 PTLTMDTNA--KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST---------- 226 PTL A + V + VLG L T ++ +K G L Y+ T Sbjct: 14 PTLVQALPATLALMVLTTVLGSAFGLVLT-WAQVSEDKVGAGLAKGYVFTLRCTPPIVLL 72 Query: 227 FLIF-GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285 FL+F GLP L + L D +F F+ +A+ AA I+E+ Sbjct: 73 FLVFYGLPQF----LNWWLGVDIDHWSKFVFV------------LVAMFLLFAAMISEVF 116 Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345 ++ +A+P+GQMEA +++GLT + ++LPQA R +P +T+ LNL+++++LA +G Sbjct: 117 KAAYLAIPKGQMEAGLSIGLTPAQTIWRIVLPQAFRVALPNMTTAILNLMRDAALAYTIG 176 Query: 346 FADLVSVGGTII--NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 F D++ G +I N ++E IY ++++I+ L ++++ E+ Sbjct: 177 FIDIMGAGNNLISRNLGNYSLETYTAVAVIYWGIALVISFSAQLLEKRLSVTER 230 >gi|290890238|ref|ZP_06553318.1| hypothetical protein AWRIB429_0708 [Oenococcus oeni AWRIB429] gi|290480125|gb|EFD88769.1| hypothetical protein AWRIB429_0708 [Oenococcus oeni AWRIB429] Length = 176 Score = 80.1 bits (196), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 43/114 (37%), Positives = 70/114 (61%) Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327 S I +S T A++AEI+R G+I++ +GQ EAA ALG+TH + ++LPQA+R+ IP + Sbjct: 26 SALIIVSINTGAYLAEIIRGGIISIDQGQFEAASALGMTHFQQMEKIVLPQAVRNSIPAV 85 Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 T++++ +K++S+ + ++L G TI Q Q L IYL L+ I Sbjct: 86 TNEFIVNIKDTSVLSIISVSELFFTGSTIAGQNFQFFHTYLTISLIYLVLTFTI 139 >gi|124265638|ref|YP_001019642.1| amino acid permease [Methylibium petroleiphilum PM1] gi|124258413|gb|ABM93407.1| amino acid permease [Methylibium petroleiphilum PM1] Length = 222 Score = 80.1 bits (196), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 43/131 (32%), Positives = 82/131 (62%), Gaps = 6/131 (4%) Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326 +S I + + AA+ +EI+R+G+ +VP+GQ+ A A+G+T+ ++ +L++LPQA R+++P Sbjct: 93 LSAIITFTVFEAAYYSEIMRAGIQSVPKGQVYAGYAVGMTYSQSMQLIVLPQAFRNMLPV 152 Query: 327 LTSQYLNLLKNSSLAVAVGFADLV---SVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 L +Q + L +++SL A+G DL+ V G N + +E L+ +Y + +++ Sbjct: 153 LMTQTIILFQDTSLVYAIGAYDLLKGFEVAGKNFN---RPVETYLVAAVVYFVICFSLSM 209 Query: 384 FMNRLNAKIAL 394 + RL KIA+ Sbjct: 210 LVRRLQKKIAI 220 >gi|152988501|ref|YP_001351133.1| ABC transporter permease [Pseudomonas aeruginosa PA7] gi|150963659|gb|ABR85684.1| probable permease of ABC transporter [Pseudomonas aeruginosa PA7] Length = 320 Score = 80.1 bits (196), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 60/177 (33%), Positives = 96/177 (54%), Gaps = 21/177 (11%) Query: 193 SFVLGIVLSLFA--TRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 S +G+ + L A RLS++ T L +Y+ L+ G P LV I + Y Sbjct: 132 SGAIGLAIGLVAGLCRLSKN---PTLHDLSTIYVE--LVRGTPLLVQIFIFY-------- 178 Query: 251 LGQFNFIGGS-TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309 FIG +S EF + AL+ +T A++AEI+R+G+ ++ RGQ EAA +LGL + Sbjct: 179 ----FFIGTVLDLSREFAGV-AALALFTGAYVAEIIRAGVQSIARGQNEAARSLGLNASQ 233 Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 + R V+LPQA + ++PPL Q+++L+K++SL + +L G I + EI Sbjct: 234 SMRHVILPQAFKRVLPPLAGQFISLVKDTSLVSVIAITELTKSGREAITTSFSTFEI 290 Score = 40.8 bits (94), Expect = 0.41, Method: Compositional matrix adjust. Identities = 32/101 (31%), Positives = 48/101 (47%), Gaps = 2/101 (1%) Query: 50 NNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAF-SGMIPAT 108 ++ E+ L++ L G ++ +G V + A +L G T WL+ SG I Sbjct: 79 DSGEQQVLTVAADSLQFAEGDDVAEGDVVGVTRHWAAGPLLWGLWTTLWLSLVSGAI-GL 137 Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 IG + G RLS N + + +YVE+ R P LV IF Y Sbjct: 138 AIGLVAGLCRLSKNPTLHDLSTIYVELVRGTPLLVQIFIFY 178 >gi|15673779|ref|NP_267954.1| glutamate ABC transporter permease protein [Lactococcus lactis subsp. lactis Il1403] gi|281492390|ref|YP_003354370.1| polar amino acid ABC transporter permease [Lactococcus lactis subsp. lactis KF147] gi|12724822|gb|AAK05895.1|AE006409_5 glutamate ABC transporter permease protein [Lactococcus lactis subsp. lactis Il1403] gi|281376054|gb|ADA65545.1| Polar amino acid ABC transporter, permease protein [Lactococcus lactis subsp. lactis KF147] gi|326407285|gb|ADZ64356.1| polar amino acid ABC transporter, permease protein [Lactococcus lactis subsp. lactis CV56] Length = 228 Score = 80.1 bits (196), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 45/127 (35%), Positives = 78/127 (61%), Gaps = 4/127 (3%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I +S + A++AEIVR+G+ AVP GQ EAA +LG+ R+A V+LPQA+R+I+P + ++ Sbjct: 101 IVISLNSGAYMAEIVRAGIEAVPLGQKEAAYSLGIRPRQAMATVILPQALRNILPAVGNE 160 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE----IILIWMFIYLSLSIMIALFMN 386 ++ ++K+SSL +G ++ + T+ N T Q I + L + + +S ++ LF Sbjct: 161 FVTIIKDSSLLYTIGVMEVFNGAQTVANLTYQTISPMLFVALYYFVVTFVVSRLLVLFEK 220 Query: 387 RLNAKIA 393 +L A Sbjct: 221 KLGKGYA 227 >gi|260904003|ref|ZP_05912325.1| amino acid ABC transporter membrane protein [Brevibacterium linens BL2] Length = 263 Score = 80.1 bits (196), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 64/215 (29%), Positives = 109/215 (50%), Gaps = 27/215 (12%) Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST---FLIFGLPTLVLIALKYQLHF 246 FV + LGI+L+L K P +I+T L GLP L++ L F Sbjct: 69 FVLALSLGILLALM----------KISSVAPYRWIATGYIELFRGLPALIVF-----LAF 113 Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306 V F + ++++ +AL +A+IAE +R+GL AVP+GQ EAA +LG++ Sbjct: 114 GYAVPYAFGIRMDT-----YVTVMLALGIVESAYIAETLRAGLQAVPKGQFEAARSLGMS 168 Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA----DLVSVGGTIINQTGQ 362 H +A +++PQA R I+PPLT++ + + K+SSL +G +L G I+ Sbjct: 169 HSRAMITIVIPQAFRIILPPLTNEIILMTKDSSLIYILGLTAAQYELTKFGREAISNPEA 228 Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 + +++ YL ++I + + R ++ A +K Sbjct: 229 GLTPLVVAGVCYLIITIPLGMLARRFESRTAKIKK 263 >gi|77405308|ref|ZP_00782404.1| amino acid ABC transporter, permease protein [Streptococcus agalactiae H36B] gi|77176103|gb|EAO78876.1| amino acid ABC transporter, permease protein [Streptococcus agalactiae H36B] Length = 230 Score = 80.1 bits (196), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 39/119 (32%), Positives = 76/119 (63%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I +S + A+I+EIVR+G+ AVP GQ+EAA +LG+ + R V+LPQA ++I+P L ++ Sbjct: 101 IIISLNSGAYISEIVRAGIEAVPSGQIEAAYSLGIRPKNTLRYVILPQAFKNILPALGNE 160 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 ++ ++K+S+L +G +L + +++ T + +L F YL L+ +++ + ++ Sbjct: 161 FITIIKDSALLQTIGVMELWNGAQSVVTATYSPVAPLLFAAFYYLMLTTILSALLKQME 219 >gi|319945662|ref|ZP_08019914.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus australis ATCC 700641] gi|319748261|gb|EFW00503.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus australis ATCC 700641] Length = 230 Score = 80.1 bits (196), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 56/199 (28%), Positives = 101/199 (50%), Gaps = 29/199 (14%) Query: 212 HEKTGKALPLLYIST----------FLIF-GLPTLVLIALKYQLHFDKPVLGQFNFIGGS 260 +K G L Y+ T FL+F GLP L + L D +F F+ Sbjct: 48 EDKVGAGLAKGYVFTLRCTPPIVLLFLVFYGLPQF----LNWWLGIDIDHWSKFVFV--- 100 Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320 IA+ AA I+E+ ++ +A+P+GQMEA +++GLT + ++LPQA Sbjct: 101 ---------LIAMFLLFAAMISEVFKAAYLAIPKGQMEAGLSIGLTPAQTIWRIVLPQAF 151 Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII--NQTGQAIEIILIWMFIYLSLS 378 R +P +T+ LNL+++++LA +GF D++ G +I N ++E IY +++ Sbjct: 152 RVALPNMTTAILNLMRDAALAYTIGFIDIMGAGNNLISRNLGNYSLETYTAVAVIYWAIA 211 Query: 379 IMIALFMNRLNAKIALKEK 397 ++I+ L ++++ E+ Sbjct: 212 LVISFSAQLLEKRLSVTER 230 >gi|302387424|ref|YP_003823246.1| polar amino acid ABC transporter, inner membrane subunit [Clostridium saccharolyticum WM1] gi|302198052|gb|ADL05623.1| polar amino acid ABC transporter, inner membrane subunit [Clostridium saccharolyticum WM1] Length = 230 Score = 80.1 bits (196), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 59/211 (27%), Positives = 111/211 (52%), Gaps = 24/211 (11%) Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGK-----ALPLLYISTFLIFGLPTLVLIALKY 242 KI F+ ++GI+L F + R +E T K A+ +Y++ +I G P +V + + Y Sbjct: 31 KITFFAVLIGILLG-FLVAIIRSTYENTHKLKILNAICSVYLT--VIRGTPVVVQLMIMY 87 Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302 + F ST + + +A + A++AEI RSG+ ++ RGQ EA + Sbjct: 88 FVIF------------ASTNPGQVPTAILAFGINSGAYVAEIFRSGISSIERGQFEAGRS 135 Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362 LG + + +++PQA ++++P L ++++ LLK +S+A +G DL G I ++T Sbjct: 136 LGFNYAQTMWFIIMPQAFKNVVPTLANEFIVLLKETSVAGYIGLQDLTKGGDIIKSRTYS 195 Query: 363 A----IEIILIWMFIYLSLSIMIALFMNRLN 389 A I + +I++ + + S ++ L RL+ Sbjct: 196 AFMPLIAVAIIYLVMVMVFSYLVKLLERRLH 226 >gi|302518222|ref|ZP_07270564.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Streptomyces sp. SPB78] gi|302427117|gb|EFK98932.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Streptomyces sp. SPB78] Length = 334 Score = 80.1 bits (196), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 67/212 (31%), Positives = 111/212 (52%), Gaps = 35/212 (16%) Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL-YISTFLIF-- 230 RGL LT+ A + V FVLG +L+L R+S + P+L ++S+ I+ Sbjct: 112 RGLG---LTLWLTALVMVLGFVLGTLLAL--GRMSSN---------PVLSWVSSGYIWFF 157 Query: 231 -GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY------------IALSCYT 277 P LV + + + P LG G PEF+++ + L+ + Sbjct: 158 RSTPILVQLLFWFNIGALYPRLGL-----GIPFGPEFVTVKTVNLLGPVTVAVLGLTLHE 212 Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 AA+ AE+VR GL++V RGQ+EAA +LGL+ + R ++LPQAMR+I+PP + + LK Sbjct: 213 AAYAAEVVRGGLLSVDRGQIEAAQSLGLSPWRRLRRIVLPQAMRAIVPPAGNMLIGALKG 272 Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369 +S+ + DL+ + ++T Q I ++L+ Sbjct: 273 TSIVSVIAVQDLLYSVQLVYHRTYQVIPLLLV 304 Score = 44.7 bits (104), Expect = 0.023, Method: Compositional matrix adjust. Identities = 23/70 (32%), Positives = 40/70 (57%) Query: 81 SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140 +D +A+L G T WL M+ ++GTL+ GR+S+N +++W+ Y+ FR+ P Sbjct: 102 ADYFTTSAVLRGLGLTLWLTALVMVLGFVLGTLLALGRMSSNPVLSWVSSGYIWFFRSTP 161 Query: 141 PLVVIFFLYK 150 LV + F + Sbjct: 162 ILVQLLFWFN 171 >gi|227508252|ref|ZP_03938301.1| ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227511259|ref|ZP_03941308.1| ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus buchneri ATCC 11577] gi|227523474|ref|ZP_03953523.1| ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus hilgardii ATCC 8290] gi|227085510|gb|EEI20822.1| ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus buchneri ATCC 11577] gi|227089369|gb|EEI24681.1| ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus hilgardii ATCC 8290] gi|227192481|gb|EEI72548.1| ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 232 Score = 80.1 bits (196), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 55/175 (31%), Positives = 98/175 (56%), Gaps = 4/175 (2%) Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248 I + SFV+G++++LF T L R K G L L I F ++ + L+ + ++F Sbjct: 23 IAIISFVIGLIIALF-TALIR-LSSKRGAFLMLKAIFRFYVWLFRSTPLLVQLFIVYFGL 80 Query: 249 PVLG-QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307 P L + F G ++P + I S T A+ +E +R+ ++++P GQ EAA ++G+T Sbjct: 81 PYLKIKGIFPNGIQLNPVIAGI-ITFSLNTGAYCSETIRASILSIPEGQWEAAYSIGMTK 139 Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362 R ++LPQA+R +PPL + +++L+K++SLA ++ ++ V I Q Q Sbjct: 140 SVVLRRIILPQAIRISLPPLANSFISLVKDTSLAASITIVEMFEVSQQIAAQNYQ 194 >gi|161504005|ref|YP_001571117.1| glutamine ABC transporter permease protein [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160865352|gb|ABX21975.1| hypothetical protein SARI_02098 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 219 Score = 80.1 bits (196), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 59/198 (29%), Positives = 109/198 (55%), Gaps = 12/198 (6%) Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256 G+V+ L A +R F + L++I +I G P +V + Y F P+ FN Sbjct: 33 GLVIGL-AAGFARTFGGWFANHIALIFIE--IIRGTPIVVQVMFIY---FALPM--AFND 84 Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316 + + P F + + + + A+IAEI R ++++ +G EA +ALGL+ R+ R V+L Sbjct: 85 L---RIDP-FSAAVVTIMINSGAYIAEITRGAVLSIHKGFREAGLALGLSRRETIRHVIL 140 Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376 P A+R ++PPL +Q++ +K++SL + +G A+L G II +A+EI YL Sbjct: 141 PLALRRMLPPLGNQWIISIKDTSLFIVIGVAELTRQGQEIIAGNFRALEIWSAVAVFYLI 200 Query: 377 LSIMIALFMNRLNAKIAL 394 ++++++ + RL ++ + Sbjct: 201 ITLVLSFILRRLERRMKI 218 >gi|52144882|ref|YP_081947.1| amino acid ABC transport system, permease [Bacillus cereus E33L] gi|51978351|gb|AAU19901.1| amino acid ABC transport system, permease [Bacillus cereus E33L] Length = 269 Score = 80.1 bits (196), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 74/224 (33%), Positives = 116/224 (51%), Gaps = 21/224 (9%) Query: 177 SFPTLTMDT--NAKIFVFSFVLGIVLSLFAT--RLSRHFHEKTGKALPLLYISTFLIFGL 232 ++PTL T ++ + S VLG ++ L R+S + K ++ +YI+ +I G Sbjct: 47 TYPTLLKATIVTLQLTLTSLVLGSLIGLLFAFFRIS---NNKFLNSIAHVYIA--IIRGT 101 Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292 P +V IA+ Y F +P F + IAL+ + A+I EI R + +V Sbjct: 102 PLIVQIAILY-----------FGITSVVVFTP-FWAGAIALAIHNGAYITEIFRGSIQSV 149 Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352 RGQMEAA +LG+ + A R ++LPQA R IPPL +Q++ LK+SSL VG ++L Sbjct: 150 DRGQMEAARSLGMPYSLAMRRIVLPQAFRQSIPPLGNQFIIGLKDSSLVAYVGMSELWGS 209 Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 G +I Q +E +I YL L ++ +N L ++ KE Sbjct: 210 GLSIAAGNFQQLETYIIVGLYYLVLVLLFTYLVNLLEKRLQRKE 253 Score = 36.2 bits (82), Expect = 9.5, Method: Compositional matrix adjust. Identities = 24/74 (32%), Positives = 39/74 (52%), Gaps = 1/74 (1%) Query: 83 SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142 S+Y T +L + T L + ++ ++IG L R+S NK + I VY+ + R P + Sbjct: 46 STYPT-LLKATIVTLQLTLTSLVLGSLIGLLFAFFRISNNKFLNSIAHVYIAIIRGTPLI 104 Query: 143 VVIFFLYKSVLSVL 156 V I LY + SV+ Sbjct: 105 VQIAILYFGITSVV 118 >gi|257865888|ref|ZP_05645541.1| binding-protein-dependent transport system inner membrane component [Enterococcus casseliflavus EC30] gi|257875515|ref|ZP_05655168.1| polar amino acid ABC transporter [Enterococcus casseliflavus EC20] gi|325569898|ref|ZP_08145892.1| glutamine ABC superfamily ATP binding cassette transporter, permease protein [Enterococcus casseliflavus ATCC 12755] gi|257799822|gb|EEV28874.1| binding-protein-dependent transport system inner membrane component [Enterococcus casseliflavus EC30] gi|257809681|gb|EEV38501.1| polar amino acid ABC transporter [Enterococcus casseliflavus EC20] gi|325157021|gb|EGC69189.1| glutamine ABC superfamily ATP binding cassette transporter, permease protein [Enterococcus casseliflavus ATCC 12755] Length = 229 Score = 80.1 bits (196), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 44/128 (34%), Positives = 76/128 (59%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IALS + A++AEIVR G+ AV GQ EAA +LGL + R V+LPQA+R+I+PPL ++ Sbjct: 102 IALSLNSGAYVAEIVRGGINAVDYGQTEAAGSLGLRPFQTMRYVVLPQALRNILPPLGNE 161 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++ L+K+SSL +G +L++ ++ + Q + + IY L+ + ++ Sbjct: 162 FIVLIKDSSLLSTIGIYELMNSAQIVVTSSFQPLTPFYVAAVIYFILTFTTSRLLSLWEK 221 Query: 391 KIALKEKK 398 K+ ++ Sbjct: 222 KLGKGYRR 229 >gi|222102584|ref|YP_002539623.1| ABC transporter membrane spanning protein (amino acid) [Agrobacterium vitis S4] gi|221739185|gb|ACM39918.1| ABC transporter membrane spanning protein (amino acid) [Agrobacterium vitis S4] Length = 219 Score = 80.1 bits (196), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 58/203 (28%), Positives = 107/203 (52%), Gaps = 14/203 (6%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 + SF G+ L L T + R F K A+ Y+ ++I G P LV + + + + P Sbjct: 21 ILSFTFGLTLGL-VTAIGRLFGAKPVAAIARFYV--WVIRGTPLLVQL---FVIFYGLPS 74 Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 +G + F + I + A+ +EI+R+ + +VP+GQ EAA ++G++ R+A Sbjct: 75 IG--------ILLDAFPAALIGFTLNIGAYSSEIIRAVISSVPKGQWEAAYSIGMSWRQA 126 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370 +LPQA R +PPL++ +++L+K++SLA A+ +L I+ T + + + + Sbjct: 127 MLRTILPQAARVAVPPLSNTFISLVKDTSLAAAITVPELFQAAQRIVATTYEPLILYIEA 186 Query: 371 MFIYLSLSIMIALFMNRLNAKIA 393 IYL+L +++ RL + A Sbjct: 187 ALIYLALCSVLSTVQVRLERRFA 209 >gi|212716471|ref|ZP_03324599.1| hypothetical protein BIFCAT_01395 [Bifidobacterium catenulatum DSM 16992] gi|212660724|gb|EEB21299.1| hypothetical protein BIFCAT_01395 [Bifidobacterium catenulatum DSM 16992] Length = 327 Score = 80.1 bits (196), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 50/138 (36%), Positives = 80/138 (57%), Gaps = 1/138 (0%) Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312 +F I +V F + ++ L+ AA++AEIVR+GL AV GQ EAA ALG+ R Sbjct: 144 EFWSIDSQSVITAFNAAWLGLALNEAAYLAEIVRAGLEAVDPGQTEAAKALGMKRSMIMR 203 Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA-DLVSVGGTIINQTGQAIEIILIWM 371 V+LPQAMR IIPP ++++ +LK +SL AV F +L I + + I ++++ Sbjct: 204 RVVLPQAMRIIIPPTGNEFIGMLKTTSLVNAVPFTLELQFATTAIATRLYKPIPLLIVAC 263 Query: 372 FIYLSLSIMIALFMNRLN 389 YL ++ ++ + +RL Sbjct: 264 IWYLVITSILMVLQSRLE 281 >gi|150403485|ref|YP_001330779.1| polar amino acid ABC transporter inner membrane subunit [Methanococcus maripaludis C7] gi|150034515|gb|ABR66628.1| polar amino acid ABC transporter, inner membrane subunit [Methanococcus maripaludis C7] Length = 219 Score = 80.1 bits (196), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 61/190 (32%), Positives = 95/190 (50%), Gaps = 13/190 (6%) Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247 KI + SF+L +V+++ + KT + + YI F G P L+ QL F Sbjct: 22 KITIMSFLLAVVIAVLVGSIRAMNFSKTLNLILMAYIEVFR--GTPLLI------QLFFI 73 Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307 L + ST + + LS A+I+EI+R+ + +VP GQ EAA +LG++ Sbjct: 74 YYGLPSIGIVMSSTFAA-----VLGLSLNGGAYISEIIRAAIQSVPVGQFEAAESLGMSK 128 Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367 ++ ++LPQA R IPPL + + +LK SSL + +L +G I +T + EI Sbjct: 129 IESMIYIVLPQAFRITIPPLVNSFSAILKESSLISVLAITELTRIGQLIYTKTSRPFEIY 188 Query: 368 LIWMFIYLSL 377 L IYL L Sbjct: 189 LTIGLIYLVL 198 >gi|315650536|ref|ZP_07903602.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Eubacterium saburreum DSM 3986] gi|315487191|gb|EFU77507.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Eubacterium saburreum DSM 3986] Length = 230 Score = 80.1 bits (196), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 56/208 (26%), Positives = 110/208 (52%), Gaps = 20/208 (9%) Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF---LIFGLPTLVLIALKYQL 244 K+ F+ +LG VL F+ + R +E T K L ++ +I G P +V + + Y + Sbjct: 31 KVTFFAVILGFVLG-FSVAIVRDVYENTKKLKVLNFLCNVYLTVIRGTPVVVQLLIIYFV 89 Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304 F S + ++ +A + A+ AEI RSG+ ++P+GQMEA +LG Sbjct: 90 IFS------------SIKIDKSIAAVLAFGINSGAYQAEIFRSGINSIPKGQMEAGRSLG 137 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA- 363 +R+ +++PQA+++++P L ++++ L+K +S+A + DL G I ++T A Sbjct: 138 FNYRQTMVNIIMPQAIKNVLPTLGNEFIVLMKETSVAGYIALEDLTKAGDIIRSRTYSAM 197 Query: 364 ---IEIILIWMFIYLSLSIMIALFMNRL 388 + + L+++ + + S ++ +F RL Sbjct: 198 MPFLAVALLYLIMVMFFSHLLKMFERRL 225 >gi|242280217|ref|YP_002992346.1| polar amino acid ABC transporter inner membrane subunit [Desulfovibrio salexigens DSM 2638] gi|242123111|gb|ACS80807.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio salexigens DSM 2638] Length = 344 Score = 80.1 bits (196), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 51/188 (27%), Positives = 104/188 (55%), Gaps = 15/188 (7%) Query: 214 KTGKALPLLYISTFLIF---GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY 270 K + P + IS F+I+ G P L+ + + +++ P +G T+SP +L Sbjct: 169 KISRMQPFMAISWFIIWFFRGTPLLLQL---FFIYYGLPAIG-------ITLSPLAAAL- 217 Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I L +A++AEI+R+G+ ++ GQ EAA ALG+T+ + R V++PQ + IIPP+ ++ Sbjct: 218 IGLGINYSAYLAEIIRAGIESIDDGQTEAAKALGMTYGQTMRRVIIPQTYKRIIPPIANE 277 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++ L+K+++L + +L+ + N + ++++ IYL + + F ++ Sbjct: 278 FIALIKDTALVSTIAMVELMRAADQMFNAYFN-VTVLVMAAVIYLIFTSVFTFFFEKIEY 336 Query: 391 KIALKEKK 398 K+ + E++ Sbjct: 337 KVGVYERR 344 >gi|295839709|ref|ZP_06826642.1| His/Glu/Gln/Arg/opine family amino acid ABC transporter, permease [Streptomyces sp. SPB74] gi|197700002|gb|EDY46935.1| His/Glu/Gln/Arg/opine family amino acid ABC transporter, permease [Streptomyces sp. SPB74] Length = 340 Score = 80.1 bits (196), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 68/212 (32%), Positives = 111/212 (52%), Gaps = 35/212 (16%) Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL-YISTFLIF-- 230 RGL LT+ A + V FVLG +L+L R+S A P+L ++S+ I+ Sbjct: 118 RGLG---LTLWLTALVMVLGFVLGTLLAL--GRMS---------ANPVLSWVSSGYIWFF 163 Query: 231 -GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY------------IALSCYT 277 P LV + + + P LG G PEF+++ + L+ + Sbjct: 164 RSTPILVQLLFWFNIGALYPRLGL-----GIPFGPEFVTVKTVNLLGPVTVAVLGLTLHE 218 Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 AA+ AE+VR GL++V RGQ+EAA +LGL+ + R ++LPQAMR+I+PP + + LK Sbjct: 219 AAYAAEVVRGGLLSVDRGQIEAAQSLGLSPWRRLRRIVLPQAMRAIVPPAGNMLIGALKG 278 Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369 +S+ + DL+ + ++T Q I ++L+ Sbjct: 279 TSIVSVIAVQDLLYSVQLVYHRTYQVIPLLLV 310 Score = 45.8 bits (107), Expect = 0.011, Method: Compositional matrix adjust. Identities = 29/88 (32%), Positives = 48/88 (54%), Gaps = 3/88 (3%) Query: 81 SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140 +D +A+L G T WL M+ ++GTL+ GR+SAN +++W+ Y+ FR+ P Sbjct: 108 ADYFTTSAVLRGLGLTLWLTALVMVLGFVLGTLLALGRMSANPVLSWVSSGYIWFFRSTP 167 Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFG 168 LV + F + + L P + +PFG Sbjct: 168 ILVQLLFWFN--IGAL-YPRLGLGIPFG 192 >gi|160942992|ref|ZP_02090230.1| hypothetical protein FAEPRAM212_00469 [Faecalibacterium prausnitzii M21/2] gi|158445686|gb|EDP22689.1| hypothetical protein FAEPRAM212_00469 [Faecalibacterium prausnitzii M21/2] Length = 254 Score = 80.1 bits (196), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 40/127 (31%), Positives = 80/127 (62%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + L + A+++EI+R GL+AV GQMEA +LGL + ++++PQA+R+++P L ++ Sbjct: 128 LTLGINSGAYVSEIIRGGLMAVDPGQMEAGRSLGLNYMTTMVVIIIPQAIRAVLPALGNE 187 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++ LLK++SL +G +L+ I+N+T +A+ +L IYL L ++ +++ Sbjct: 188 FIVLLKDTSLITTIGGKELLYAAQGIMNRTYEAMFPLLGVALIYLILVMLFTWLLSKFER 247 Query: 391 KIALKEK 397 ++A ++ Sbjct: 248 RLAQSDR 254 >gi|16759747|ref|NP_455364.1| glutamine ABC transporter permease [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|16764191|ref|NP_459806.1| glutamine ABC transporter permease protein [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|29142480|ref|NP_805822.1| glutamine ABC transporter permease [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|56414071|ref|YP_151146.1| glutamine ABC transporter permease [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|161614919|ref|YP_001588884.1| glutamine ABC transporter permease protein [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|167550478|ref|ZP_02344235.1| glutamine ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|167992065|ref|ZP_02573163.1| glutamine ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|168230731|ref|ZP_02655789.1| glutamine ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|168236761|ref|ZP_02661819.1| glutamine ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|168240697|ref|ZP_02665629.1| glutamine ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|168263668|ref|ZP_02685641.1| glutamine ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|168466430|ref|ZP_02700292.1| glutamine ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|168820021|ref|ZP_02832021.1| glutamine ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|194445368|ref|YP_002040065.1| glutamine ABC transporter permease protein [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194448838|ref|YP_002044857.1| glutamine ABC transporter permease protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194468570|ref|ZP_03074554.1| glutamine ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194737623|ref|YP_002113920.1| glutamine ABC transporter permease protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197249080|ref|YP_002145785.1| glutamine ABC transporter permease [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197264015|ref|ZP_03164089.1| glutamine ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197362994|ref|YP_002142631.1| glutamine ABC transporter permease [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|198242595|ref|YP_002214792.1| glutamine ABC transporter permease protein [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|200389501|ref|ZP_03216112.1| glutamine ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204929959|ref|ZP_03220980.1| glutamine ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205352085|ref|YP_002225886.1| glutamine ABC transporter permease [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|207856265|ref|YP_002242916.1| glutamine ABC transporter permease [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|213163838|ref|ZP_03349548.1| glutamine ABC transporter permease protein [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213424778|ref|ZP_03357528.1| glutamine ABC transporter permease protein [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213583835|ref|ZP_03365661.1| glutamine ABC transporter permease protein [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] gi|213622114|ref|ZP_03374897.1| glutamine ABC transporter permease protein [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] gi|213649898|ref|ZP_03379951.1| glutamine ABC transporter permease protein [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|224582640|ref|YP_002636438.1| glutamine ABC transporter permease [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|238913895|ref|ZP_04657732.1| glutamine ABC transporter permease protein [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|289809887|ref|ZP_06540516.1| glutamine ABC transporter permease protein [Salmonella enterica subsp. enterica serovar Typhi str. AG3] gi|289823691|ref|ZP_06543303.1| glutamine ABC transporter permease protein [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|25296621|pir||AB0601 glutamine transport system permease protein GlnP STY0867 [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16419335|gb|AAL19765.1| glutamine high-affinity transporter [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|16502040|emb|CAD05276.1| glutamine transport system permease protein GlnP [Salmonella enterica subsp. enterica serovar Typhi] gi|29138111|gb|AAO69682.1| glutamine transport system permease protein GlnP [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|56128328|gb|AAV77834.1| glutamine transport system permease protein GlnP [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|161364283|gb|ABX68051.1| hypothetical protein SPAB_02673 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194404031|gb|ACF64253.1| glutamine ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194407142|gb|ACF67361.1| glutamine ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194454934|gb|EDX43773.1| glutamine ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194713125|gb|ACF92346.1| glutamine ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|195631095|gb|EDX49681.1| glutamine ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197094471|emb|CAR59988.1| glutamine transport system permease protein GlnP [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|197212783|gb|ACH50180.1| glutamine ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197242270|gb|EDY24890.1| glutamine ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197290199|gb|EDY29556.1| glutamine ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|197937111|gb|ACH74444.1| glutamine ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|199601946|gb|EDZ00492.1| glutamine ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204320953|gb|EDZ06154.1| glutamine ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205271866|emb|CAR36702.1| glutamine transport system permease protein GlnP [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205324488|gb|EDZ12327.1| glutamine ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205329674|gb|EDZ16438.1| glutamine ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205334880|gb|EDZ21644.1| glutamine ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|205339925|gb|EDZ26689.1| glutamine ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205343078|gb|EDZ29842.1| glutamine ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205347825|gb|EDZ34456.1| glutamine ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|206708068|emb|CAR32359.1| glutamine transport system permease protein GlnP [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|224467167|gb|ACN44997.1| glutamine ABC transporter permease component [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|261246086|emb|CBG23888.1| glutamine transport system permease protein GlnP [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267992575|gb|ACY87460.1| glutamine ABC transporter permease protein [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301157413|emb|CBW16902.1| glutamine transport system permease protein GlnP [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312911852|dbj|BAJ35826.1| glutamine ABC transporter permease protein [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|320085102|emb|CBY94889.1| L-cystine transport system permease protein tcyB [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|321226402|gb|EFX51453.1| Glutamate transport membrane-spanning protein [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|323129135|gb|ADX16565.1| glutamine ABC transporter permease protein [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|326622545|gb|EGE28890.1| glutamine ABC transporter permease protein [Salmonella enterica subsp. enterica serovar Dublin str. 3246] gi|326627127|gb|EGE33470.1| glutamine ABC transporter permease protein [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 219 Score = 80.1 bits (196), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 62/212 (29%), Positives = 114/212 (53%), Gaps = 14/212 (6%) Query: 186 NAKIFVFSFVLGIVLSL---FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY 242 AK+ ++ VLG+ L A +R F + L++I +I G P +V + Y Sbjct: 18 GAKMTLWISVLGLAGGLVIGLAAGFARTFGGWFANHIALVFIE--IIRGTPIVVQVMFIY 75 Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302 F P+ FN + + P F + + + + A+IAEI R ++++ +G EA +A Sbjct: 76 ---FALPM--AFNDL---RIDP-FSAAVVTIMINSGAYIAEITRGAVLSIHKGFREAGLA 126 Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362 LGL+ R+ R V+LP A+R ++PPL +Q++ +K++SL + +G A+L G II + Sbjct: 127 LGLSRRETIRHVILPLALRRMLPPLGNQWIISIKDTSLFIVIGVAELTRQGQEIIAGNFR 186 Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394 A+EI YL ++++++ + RL ++ + Sbjct: 187 ALEIWSAVAVFYLIITLVLSFILRRLERRMKI 218 >gi|213029271|ref|ZP_03343718.1| glutamine ABC transporter permease protein [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 199 Score = 80.1 bits (196), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 59/198 (29%), Positives = 109/198 (55%), Gaps = 12/198 (6%) Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256 G+V+ L A +R F + L++I +I G P +V + Y F P+ FN Sbjct: 13 GLVIGL-AAGFARTFGGWFANHIALVFIE--IIRGTPIVVQVMFIY---FALPM--AFND 64 Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316 + + P F + + + + A+IAEI R ++++ +G EA +ALGL+ R+ R V+L Sbjct: 65 L---RIDP-FSAAVVTIMINSGAYIAEITRGAVLSIHKGFREAGLALGLSRRETIRHVIL 120 Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376 P A+R ++PPL +Q++ +K++SL + +G A+L G II +A+EI YL Sbjct: 121 PLALRRMLPPLGNQWIISIKDTSLFIVIGVAELTRQGQEIIAGNFRALEIWSAVAVFYLI 180 Query: 377 LSIMIALFMNRLNAKIAL 394 ++++++ + RL ++ + Sbjct: 181 ITLVLSFILRRLERRMKI 198 >gi|295109170|emb|CBL23123.1| amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Ruminococcus obeum A2-162] Length = 261 Score = 80.1 bits (196), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 65/223 (29%), Positives = 113/223 (50%), Gaps = 30/223 (13%) Query: 193 SFVLGIVLSLF---------ATRLSRHFHEKTGKAL-------PLLYISTF---LIFGLP 233 FVL ++L+L A + R+ H + G L PL +I+T ++ P Sbjct: 38 GFVLALILALMRMSNIRPFRALAVDRNGHLREGGPLVWLSKFNPLSFIATAYVEILRSTP 97 Query: 234 TLVLIALKYQLHF---DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290 LV I + Y F D P F FI + P +AL + A++ EI+R+G+ Sbjct: 98 VLVQIFIIYYGVFGMIDLPSFQMFGFIKFNRFFPG----VVALGMNSGAYLCEIIRAGIQ 153 Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 ++ +GQ EAA +LGL+ R ++LPQA+++I+P + ++++ ++K S++ +G D++ Sbjct: 154 SIDQGQTEAARSLGLSQTMNLRYIILPQALKNILPAIANEFVVIIKESAITYTIGVQDIM 213 Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSL----SIMIALFMNRLN 389 S + T IE +L+ IY L S +IA F R++ Sbjct: 214 SAVNAVKGATFIIIEPLLVATAIYFCLCFPTSKLIAYFERRMS 256 >gi|293374469|ref|ZP_06620791.1| ABC transporter, permease protein [Turicibacter sanguinis PC909] gi|292646848|gb|EFF64836.1| ABC transporter, permease protein [Turicibacter sanguinis PC909] Length = 228 Score = 80.1 bits (196), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 58/198 (29%), Positives = 101/198 (51%), Gaps = 21/198 (10%) Query: 195 VLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQF 254 +LG VLS A F + PL+ L FG+P L LH P G Sbjct: 48 MLGKVLSKLADAYVAFF-----RGTPLMIQLFILWFGVPQL--------LHTRYPSFGW- 93 Query: 255 NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLV 314 +S EF+ IAL+ + A+++EI R+G+ AV +GQ EA +LGL+ ++ + V Sbjct: 94 -------ISAEFLVGAIALAINSGAYVSEIFRAGIQAVDKGQFEAGRSLGLSEKQTLKHV 146 Query: 315 LLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374 +LPQA+++I+P L ++++ ++K S++ +G DL+ I T A + ++ IY Sbjct: 147 ILPQAVKNILPALGNEFVVIIKESAIVSVIGLRDLMYNSDMIQAATFNAFGVYVVAAVIY 206 Query: 375 LSLSIMIALFMNRLNAKI 392 L+ + ++ L ++ Sbjct: 207 FILTASCSKLLSVLEGRL 224 >gi|28378733|ref|NP_785625.1| glutamine ABC transporter, substrate binding and permease protein [Lactobacillus plantarum WCFS1] gi|254556936|ref|YP_003063353.1| glutamine ABC transporter, substrate binding and permease protein [Lactobacillus plantarum JDM1] gi|308180925|ref|YP_003925053.1| glutamine ABC transporter, substrate binding and permease protein [Lactobacillus plantarum subsp. plantarum ST-III] gi|28271570|emb|CAD64475.1| glutamine ABC transporter, substrate binding and permease protein [Lactobacillus plantarum WCFS1] gi|254045863|gb|ACT62656.1| glutamine ABC transporter, substrate binding and permease protein [Lactobacillus plantarum JDM1] gi|308046416|gb|ADN98959.1| glutamine ABC transporter, substrate binding and permease protein [Lactobacillus plantarum subsp. plantarum ST-III] Length = 507 Score = 80.1 bits (196), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 59/196 (30%), Positives = 107/196 (54%), Gaps = 17/196 (8%) Query: 192 FSFVLGIVLSLFATRLSRHFHEKTG-KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 F F++GI+L+L R+++ KT + L Y+ I G P +V + Y F Sbjct: 319 FGFIIGILLAL--ARMAKGNPLKTAIRWLATAYVE--FIRGTPMMVQVMFVY---FG--- 368 Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 LG F + P S IA+S + A++AE +R G+ +V GQ EAA +LG+++ + Sbjct: 369 LGLFVNL------PALTSGIIAISLNSGAYVAEYIRGGINSVDVGQTEAARSLGMSNGET 422 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370 R V+LPQA+++I P L ++++ L+K+SS+ +G +L+ + + T + + I++ Sbjct: 423 MRYVVLPQALKNIWPSLGNEFITLIKDSSIVSIIGVTELIYQSNIVRSDTYRGVAPIVVI 482 Query: 371 MFIYLSLSIMIALFMN 386 M +Y L+ + +N Sbjct: 483 MVLYFILTFTASRILN 498 >gi|325841208|ref|ZP_08167333.1| putative arginine ABC transporter, permease protein ArtQ [Turicibacter sp. HGF1] gi|325490065|gb|EGC92411.1| putative arginine ABC transporter, permease protein ArtQ [Turicibacter sp. HGF1] Length = 233 Score = 80.1 bits (196), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 58/198 (29%), Positives = 101/198 (51%), Gaps = 21/198 (10%) Query: 195 VLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQF 254 +LG VLS A F + PL+ L FG+P L LH P G Sbjct: 53 MLGKVLSKLADAYVAFF-----RGTPLMIQLFILWFGVPQL--------LHTRYPSFGW- 98 Query: 255 NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLV 314 +S EF+ IAL+ + A+++EI R+G+ AV +GQ EA +LGL+ ++ + V Sbjct: 99 -------ISAEFLVGAIALAINSGAYVSEIFRAGIQAVDKGQFEAGRSLGLSEKQTLKHV 151 Query: 315 LLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374 +LPQA+++I+P L ++++ ++K S++ +G DL+ I T A + ++ IY Sbjct: 152 ILPQAVKNILPALGNEFVVIIKESAIVSVIGLRDLMYNSDMIQAATFNAFGVYVVAAVIY 211 Query: 375 LSLSIMIALFMNRLNAKI 392 L+ + ++ L ++ Sbjct: 212 FILTASCSKLLSVLEGRL 229 >gi|239940213|ref|ZP_04692150.1| putative ABC transporter permease protein [Streptomyces roseosporus NRRL 15998] gi|239986701|ref|ZP_04707365.1| putative ABC transporter permease protein [Streptomyces roseosporus NRRL 11379] gi|291443643|ref|ZP_06583033.1| ABC transporter permease [Streptomyces roseosporus NRRL 15998] gi|291346590|gb|EFE73494.1| ABC transporter permease [Streptomyces roseosporus NRRL 15998] Length = 292 Score = 80.1 bits (196), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 70/225 (31%), Positives = 119/225 (52%), Gaps = 24/225 (10%) Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRH-FHEKTGKALPLLYISTFLIFGL 232 RGL LT+ A + V F LG +L++ RLS + + LY ST Sbjct: 79 RGL---WLTLWLTAVVMVLGFALGALLAVL--RLSGNPVLQAVSWGYVWLYRST------ 127 Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVS---PEFMSLYIALSCYTAAFIAEIVRSGL 289 P LV + + + P +G STVS P +++ I L+ + AA+ AE+VR G+ Sbjct: 128 PILVQLLFWFNIGALYP-----QILGVSTVSLLGPVAIAV-IGLTLHEAAYAAEVVRGGI 181 Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349 ++V RGQ+EAA +LGL + R ++LPQAMRSI+PP + + LK +S+ + DL Sbjct: 182 LSVERGQIEAAQSLGLGPWRRFRRIVLPQAMRSIVPPAGNMLIGTLKGTSIVSIIAVQDL 241 Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL---FMNRLNAK 391 + + ++T Q I ++L+ Y +++ ++++ ++ R A+ Sbjct: 242 LYSVQLVYHRTYQVIPLLLVATIWYAAVTTLLSIGQRYVERYYAR 286 >gi|254464809|ref|ZP_05078220.1| amino acid ABC transporter, permease protein [Rhodobacterales bacterium Y4I] gi|206685717|gb|EDZ46199.1| amino acid ABC transporter, permease protein [Rhodobacterales bacterium Y4I] Length = 366 Score = 80.1 bits (196), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 59/211 (27%), Positives = 110/211 (52%), Gaps = 18/211 (8%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 + S LG++L+L RH+ KA+ + +I L+ G+P LI + + P+ Sbjct: 171 IVSIPLGVLLAL-----GRHYGSPAVKAICVAFIE--LVRGVP---LITILFMASVMMPL 220 Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 F+ V + + I + +++A++AE+VR GL A+P+GQ EA++ALG++ + Sbjct: 221 -----FLPPDLVINNLLRIQIGMILFSSAYMAEVVRGGLQAIPKGQTEASLALGVSPART 275 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS-VGGTIINQT--GQAIEII 367 V++PQA+R ++PPL + + L K++SL + VG D + V G ++ G E Sbjct: 276 IIFVVVPQALRHVLPPLIGRCIALFKDTSLVIIVGLLDFLGMVRGAALDPEWLGFQAEAY 335 Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 + F+Y + ++L+ L + K+ Sbjct: 336 VFAAFVYWLICYSLSLYGRALERRGPAGSKR 366 >gi|149191356|ref|ZP_01869609.1| ABC-type amino acid transport system, permease component [Vibrio shilonii AK1] gi|148834835|gb|EDL51819.1| ABC-type amino acid transport system, permease component [Vibrio shilonii AK1] Length = 365 Score = 80.1 bits (196), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 35/83 (42%), Positives = 60/83 (72%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I + ++AA++AE++R GL A+P+GQ EAA ALGLT+ K L++LPQA++ IP + + Sbjct: 235 IGVVMFSAAYMAEVIRGGLQAIPKGQYEAADALGLTYWKKMGLIVLPQALKITIPSIVNT 294 Query: 331 YLNLLKNSSLAVAVGFADLVSVG 353 ++ L K++SL + +G D++ +G Sbjct: 295 FIGLFKDTSLVLIIGMFDVLGIG 317 Score = 36.2 bits (82), Expect = 8.5, Method: Compositional matrix adjust. Identities = 20/55 (36%), Positives = 32/55 (58%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIF 146 G + T +A G+I + IG + GR S ++ IC VY+EV+R +P + V+F Sbjct: 157 GLLVTLIIALVGIIVSLPIGVALALGRRSEMPIIRSICTVYIEVWRGVPLITVLF 211 >gi|118593286|ref|ZP_01550671.1| putative amino-acid transport system permease abc transporter protein [Stappia aggregata IAM 12614] gi|118434177|gb|EAV40833.1| putative amino-acid transport system permease abc transporter protein [Stappia aggregata IAM 12614] Length = 226 Score = 80.1 bits (196), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 42/128 (32%), Positives = 76/128 (59%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + I + A+ +EI+R+ + +VP+GQ EAA + G+T R+A +LPQA R +P Sbjct: 89 FPAALIGFTLNVGAYSSEIIRAAISSVPKGQWEAAFSTGMTWRQAMLRTILPQAGRVAVP 148 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PL++ +++L+K++SLA A+ +L I+ T + + + + IYL++S ++A Sbjct: 149 PLSNTFISLVKDTSLAAAITVPELFQSAQRIVATTYEPLILYIEAALIYLAMSSVLAWLQ 208 Query: 386 NRLNAKIA 393 RL + A Sbjct: 209 ERLEVRFA 216 >gi|121593038|ref|YP_984934.1| polar amino acid ABC transporter inner membrane subunit [Acidovorax sp. JS42] gi|222109806|ref|YP_002552070.1| polar amino acid ABC transporter inner membrane subunit [Acidovorax ebreus TPSY] gi|120605118|gb|ABM40858.1| amino acid ABC transporter membrane protein 2, PAAT family [Acidovorax sp. JS42] gi|221729250|gb|ACM32070.1| polar amino acid ABC transporter, inner membrane subunit [Acidovorax ebreus TPSY] Length = 223 Score = 80.1 bits (196), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 46/136 (33%), Positives = 80/136 (58%), Gaps = 1/136 (0%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G + E +S + + AA+ +EI+R+G+ ++PRGQ+ A ALG+T+ + RLV+LPQ Sbjct: 87 GRPIGAE-VSAVVTFIAFEAAYFSEIMRAGIQSIPRGQVFAGQALGMTYGQNMRLVVLPQ 145 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378 A R+++P L +Q + L +++SL A+G D++ G+ IE L +Y L Sbjct: 146 AFRNMLPVLLTQTIILFQDTSLVYAIGAYDMLKGFEIAGKNYGRPIEAYLAAAVVYFILC 205 Query: 379 IMIALFMNRLNAKIAL 394 ++ + RL+ KIA+ Sbjct: 206 YALSWLVKRLHKKIAI 221 >gi|319957436|ref|YP_004168699.1| amino acid ABC transporter membrane protein 2, paat family [Nitratifractor salsuginis DSM 16511] gi|319419840|gb|ADV46950.1| amino acid ABC transporter membrane protein 2, PAAT family [Nitratifractor salsuginis DSM 16511] Length = 362 Score = 80.1 bits (196), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 42/125 (33%), Positives = 74/125 (59%), Gaps = 3/125 (2%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I ++ + AA++AE +RSG A+P+GQ EAA ALGL + + LV+LPQA++ IP L Sbjct: 233 IGITLFEAAYVAENIRSGFQAIPKGQYEAADALGLGYWQKMALVILPQAIKVTIPNLVGT 292 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQT---GQAIEIILIWMFIYLSLSIMIALFMNR 387 +++L K++SL + +G DL+++ N G E + F++ + ++++ R Sbjct: 293 FISLFKDTSLVMIIGLFDLLAMVNVTANDRDWLGMDTEGYVFVAFVFWIFTFSMSMYSKR 352 Query: 388 LNAKI 392 L K+ Sbjct: 353 LEKKL 357 >gi|318061946|ref|ZP_07980667.1| ABC transporter permease [Streptomyces sp. SA3_actG] gi|318078798|ref|ZP_07986130.1| ABC transporter permease [Streptomyces sp. SA3_actF] Length = 345 Score = 80.1 bits (196), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 70/213 (32%), Positives = 112/213 (52%), Gaps = 37/213 (17%) Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL-YISTFLIF-- 230 RGL LT+ A + V FVLG +L+L R+S + P+L ++S+ I+ Sbjct: 123 RGLG---LTLWLTALVMVLGFVLGTLLAL--GRMSSN---------PVLSWVSSGYIWFF 168 Query: 231 -GLPTLVLI-------ALKYQLHFDKPVLGQF------NFIGGSTVSPEFMSLYIALSCY 276 P LV + AL QL P +F N +G TV+ + L+ + Sbjct: 169 RSTPILVQLLFWFNIGALYPQLGLGIPFGPEFVTVKTVNLLGPVTVA------VLGLTLH 222 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 AA+ AE+VR GL++V RGQ+EAA +LGL+ + R ++LPQAMR+I+PP + + LK Sbjct: 223 EAAYAAEVVRGGLLSVDRGQIEAAQSLGLSPWRRLRRIVLPQAMRAIVPPAGNMLIGALK 282 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369 +S+ + DL+ + ++T Q I ++L+ Sbjct: 283 GTSIVSVIAVQDLLYSVQLVYHRTYQVIPLLLV 315 Score = 45.4 bits (106), Expect = 0.016, Method: Compositional matrix adjust. Identities = 28/88 (31%), Positives = 48/88 (54%), Gaps = 3/88 (3%) Query: 81 SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140 +D +A+L G T WL M+ ++GTL+ GR+S+N +++W+ Y+ FR+ P Sbjct: 113 ADYFTTSAVLRGLGLTLWLTALVMVLGFVLGTLLALGRMSSNPVLSWVSSGYIWFFRSTP 172 Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFG 168 LV + F + + L P + +PFG Sbjct: 173 ILVQLLFWFN--IGAL-YPQLGLGIPFG 197 >gi|296111216|ref|YP_003621598.1| glutamine ABC transporter, substrate binding and permease protein [Leuconostoc kimchii IMSNU 11154] gi|295832748|gb|ADG40629.1| glutamine ABC transporter, substrate binding and permease protein [Leuconostoc kimchii IMSNU 11154] Length = 477 Score = 80.1 bits (196), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 51/176 (28%), Positives = 83/176 (47%), Gaps = 23/176 (13%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 + LPL+ ++ F+ GLP + I + P F + I L Sbjct: 324 RGLPLMVLAFFIYIGLPGVTGIKI-----------------------PAFTAGIITLILN 360 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 A+ VR G AV RGQMEAA +LGL + A R V++PQ +R ++P +Q++ LK Sbjct: 361 EGAYTGAFVRGGFEAVDRGQMEAARSLGLPYGHAMRKVIMPQGLRIMVPSFINQFIITLK 420 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 ++S+ A+G +L G I+ + Q + I +YL + ++ N + KI Sbjct: 421 DTSILSAIGLLELTQTGTLIVARNSQGFRVWAIIAIMYLVVITLLTWLSNWVEKKI 476 >gi|237807993|ref|YP_002892433.1| polar amino acid ABC transporter, inner membrane subunit [Tolumonas auensis DSM 9187] gi|237500254|gb|ACQ92847.1| polar amino acid ABC transporter, inner membrane subunit [Tolumonas auensis DSM 9187] Length = 365 Score = 80.1 bits (196), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 36/98 (36%), Positives = 63/98 (64%) Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315 F+ G + + I + + +A++AE++R GL A+P+GQ EAA ALGL + K+ L++ Sbjct: 220 FLSGEVSMDKLLRAMIGIILFESAYVAEVIRGGLQAIPKGQYEAAKALGLNYWKSMGLII 279 Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353 +PQA++ IP L + ++ L K++SL +G DL++V Sbjct: 280 MPQALKLTIPSLVNTFIELFKDTSLVTIIGLFDLLAVA 317 >gi|220924348|ref|YP_002499650.1| polar amino acid ABC transporter inner membrane subunit [Methylobacterium nodulans ORS 2060] gi|219948955|gb|ACL59347.1| polar amino acid ABC transporter, inner membrane subunit [Methylobacterium nodulans ORS 2060] Length = 230 Score = 80.1 bits (196), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 45/164 (27%), Positives = 92/164 (56%), Gaps = 5/164 (3%) Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE---FMSLYIALSCYTAAFIAEIVRSGLI 290 +L L+ + + +F P +GQ+ + G+ + F S + + + AA+ +EI+R+G+ Sbjct: 67 SLPLVLVIFWFYFLVPYIGQW--LTGADRPIQVGAFTSSLVTFTLFEAAYFSEIMRAGIQ 124 Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 ++P+GQ AA ALGLT+ ++ ++LPQA R+++P L +Q + L +++SL + D + Sbjct: 125 SIPKGQSAAASALGLTYWQSMSNIILPQAFRNMLPVLLTQTIVLFQDTSLVYVLSITDFL 184 Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394 + + G+ +E+ L +Y + + + RL +IA+ Sbjct: 185 GAASKVAQRDGRLVEMYLFAAVVYFVICFFASTLVRRLQRRIAI 228 >gi|229170389|ref|ZP_04298062.1| Amino acid ABC transproter, permease [Bacillus cereus AH621] gi|228613086|gb|EEK70238.1| Amino acid ABC transproter, permease [Bacillus cereus AH621] Length = 230 Score = 80.1 bits (196), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 46/128 (35%), Positives = 75/128 (58%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IAL+ + A+I EI R + +V RGQ+EAA +LG+ + A R ++LPQA R +PPL +Q Sbjct: 89 IALAIHNGAYITEIFRGSIQSVDRGQLEAARSLGMPYPLAMRRIILPQAFRLSLPPLGNQ 148 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++ LK+SSL VG ++L G +I Q ++ +I YL+L ++ ++ L Sbjct: 149 FIIGLKDSSLVAYVGMSELWGSGLSIAAGNFQQLDTYIIVGVYYLALVLLFTYLVSLLEK 208 Query: 391 KIALKEKK 398 ++ KE Sbjct: 209 RLQRKENN 216 >gi|206562321|ref|YP_002233084.1| putative amino acid ABC transporter permease [Burkholderia cenocepacia J2315] gi|198038361|emb|CAR54318.1| putative amino acid ABC transporter system permease [Burkholderia cenocepacia J2315] Length = 216 Score = 80.1 bits (196), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 73/221 (33%), Positives = 114/221 (51%), Gaps = 20/221 (9%) Query: 177 SFPTLTMDTNAKIFV--FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234 S P L +F+ SF LG L L A L+R + + + Y+S F G P Sbjct: 8 SLPLLESAVTMTVFLGLASFALGSALGL-AVALARVSSIRFLRGIAFAYVSIFR--GTPL 64 Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294 LV I L Y F P G T+ P +L +AL+ ++AA+++E RSG+ AV R Sbjct: 65 LVQILLIY---FGLPRYG-------ITLDPVPAAL-LALTLFSAAYLSENFRSGINAVDR 113 Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354 GQ EAA +LG+ + K V+LPQ +R IPP+ S+ + L+K++SLA + +L V Sbjct: 114 GQWEAAHSLGMNYWKMMWRVILPQGLRIAIPPVGSRMIALIKDTSLASTITVVELTRVAD 173 Query: 355 TIINQTGQAIEIILIWMFIYLS----LSIMIALFMNRLNAK 391 + T + +E+ L+ IY L+I+ +F R++ + Sbjct: 174 QVGASTFRYMEMFLMVGLIYWVINQILTIVQTIFEGRVSRR 214 >gi|300933297|ref|ZP_07148553.1| putative ABC transport system, permease protein [Corynebacterium resistens DSM 45100] Length = 310 Score = 80.1 bits (196), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 39/82 (47%), Positives = 59/82 (71%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+ + L+ AA++AEIVR+G+ AVP GQ EA+ ALG+T + R +LPQAMR IIP Sbjct: 148 FLLAVVGLALNEAAYMAEIVRAGIQAVPEGQSEASKALGMTWWQNMRRTVLPQAMRIIIP 207 Query: 326 PLTSQYLNLLKNSSLAVAVGFA 347 P +++++LLK +SL +A+ +A Sbjct: 208 PTGNEFISLLKTTSLVIAIPYA 229 >gi|169343527|ref|ZP_02864526.1| amino acid ABC transporter, amino acid-binding protein/permease protein, His/Glu/Gln/Arg/opine family [Clostridium perfringens C str. JGS1495] gi|169298087|gb|EDS80177.1| amino acid ABC transporter, amino acid-binding protein/permease protein, His/Glu/Gln/Arg/opine family [Clostridium perfringens C str. JGS1495] Length = 519 Score = 80.1 bits (196), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 57/161 (35%), Positives = 90/161 (55%), Gaps = 11/161 (6%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 VF +LG+++ + A + R + K + +YIS F G P LV + L L+F P Sbjct: 326 VFGMILGLIVGI-ALAMIRVYKIPVLKQIAEVYISFFR--GTPLLVQLFL---LYFGVP- 378 Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 I F + I L +A+IAEI+RS + A+ +GQMEA ++LG+T +A Sbjct: 379 ----QVIPSLQNMSAFTAALIGLGLNASAYIAEILRSSIDAIDKGQMEACLSLGMTRAQA 434 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 + V+LPQA R IPPL + +++ +K SSLA +G +L++ Sbjct: 435 LKRVVLPQAFRIAIPPLGNIFVDTVKGSSLAFTLGVVELLA 475 >gi|83646476|ref|YP_434911.1| amino acid ABC transporter permease [Hahella chejuensis KCTC 2396] gi|83634519|gb|ABC30486.1| ABC-type amino acid transport system, permease component [Hahella chejuensis KCTC 2396] Length = 222 Score = 80.1 bits (196), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 43/128 (33%), Positives = 74/128 (57%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I S AA+ AEI+R+ + ++ RGQ EAA ++G+T + +LPQA R+ +PPL + Sbjct: 94 IGFSLNMAAYAAEILRAAIASIDRGQWEAAASIGMTRTQTLYRTILPQAARTALPPLGNS 153 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 +++L+K+++LA + +L I +T + + L IY L+ ++A NRL A Sbjct: 154 FISLVKDTALAATIQVPELFRQAQLITARTFEIFTMYLAAALIYWVLASVLAHLQNRLEA 213 Query: 391 KIALKEKK 398 ++ L EK Sbjct: 214 RVNLHEKD 221 Score = 39.7 bits (91), Expect = 0.87, Method: Compositional matrix adjust. Identities = 22/61 (36%), Positives = 32/61 (52%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G T L+ GM I+G + RLS+ + + W RVY+ FR P LV +F + Sbjct: 16 LLKGAGYTVGLSLGGMFFGLILGFTLAMMRLSSFRALDWTARVYISFFRGTPLLVQLFMI 75 Query: 149 Y 149 Y Sbjct: 76 Y 76 >gi|288922650|ref|ZP_06416826.1| polar amino acid ABC transporter, inner membrane subunit [Frankia sp. EUN1f] gi|288346008|gb|EFC80361.1| polar amino acid ABC transporter, inner membrane subunit [Frankia sp. EUN1f] Length = 285 Score = 80.1 bits (196), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 58/178 (32%), Positives = 89/178 (50%), Gaps = 30/178 (16%) Query: 182 TMDTNAKIFVFSFVLGIVLSL--FATRLSRHFHE----KTGKALPLLYISTFLIFGLPTL 235 T+ A VF+ LG+ L+ +TR + H +T + LPLL + F GLP L Sbjct: 70 TLRAAATGMVFAVALGVALAFARLSTRPAVHVPAAALVETLRGLPLLMLIFFAFLGLPAL 129 Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295 G +S F +L + L+ Y A ++EI R+G++++ RG Sbjct: 130 -----------------------GVDLS-AFWALVLGLTAYNGAVLSEIFRAGVLSIDRG 165 Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353 Q EAA ALGL + L+ PQA+R + P L SQ + LLK++SL +G+ +L+ G Sbjct: 166 QTEAAAALGLRGTQIFALIQFPQAVRRMSPTLVSQLVTLLKDTSLGFVIGYTELLRQG 223 >gi|168205901|ref|ZP_02631906.1| amino acid ABC transporter, amino acid-binding protein/permease protein, His/Glu/Gln/Arg/opine family [Clostridium perfringens E str. JGS1987] gi|182624018|ref|ZP_02951806.1| amino acid ABC transporter, amino acid-binding protein/permease protein, His/Glu/Gln/Arg/opine family [Clostridium perfringens D str. JGS1721] gi|170662631|gb|EDT15314.1| amino acid ABC transporter, amino acid-binding protein/permease protein, His/Glu/Gln/Arg/opine family [Clostridium perfringens E str. JGS1987] gi|177910911|gb|EDT73265.1| amino acid ABC transporter, amino acid-binding protein/permease protein, His/Glu/Gln/Arg/opine family [Clostridium perfringens D str. JGS1721] Length = 519 Score = 80.1 bits (196), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 57/161 (35%), Positives = 90/161 (55%), Gaps = 11/161 (6%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 VF +LG+++ + A + R + K + +YIS F G P LV + L L+F P Sbjct: 326 VFGMILGLIVGI-ALAMIRVYKIPVLKQIAEVYISFFR--GTPLLVQLFL---LYFGVP- 378 Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 I F + I L +A+IAEI+RS + A+ +GQMEA ++LG+T +A Sbjct: 379 ----QVIPSLQNMSAFTAALIGLGLNASAYIAEILRSSIDAIDKGQMEACLSLGMTRAQA 434 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 + V+LPQA R IPPL + +++ +K SSLA +G +L++ Sbjct: 435 LKRVVLPQAFRIAIPPLGNIFVDTVKGSSLAFTLGVVELLA 475 >gi|39935628|ref|NP_947904.1| polar amino acid ABC transport permease AapM-1 [Rhodopseudomonas palustris CGA009] gi|39649481|emb|CAE28003.1| polar amino acid ABC transport permease protein aapM-1 [Rhodopseudomonas palustris CGA009] Length = 501 Score = 80.1 bits (196), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 40/96 (41%), Positives = 62/96 (64%) Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315 F+ G+ M + I ++ + A+ AE++R GL A+PRGQ EAA ALGL++ K T L++ Sbjct: 354 FLPGNFTIDNLMRVLIGIALFAGAYNAEVIRGGLNAIPRGQAEAASALGLSYWKITGLIV 413 Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 LPQA+R +IP L + ++ L K++SL V DL+ Sbjct: 414 LPQALRHVIPGLVNSFIALFKDTSLVSIVALFDLLG 449 >gi|283954479|ref|ZP_06371999.1| amino acid ABC transporter, permease protein PEB1 [Campylobacter jejuni subsp. jejuni 414] gi|283794096|gb|EFC32845.1| amino acid ABC transporter, permease protein PEB1 [Campylobacter jejuni subsp. jejuni 414] Length = 250 Score = 80.1 bits (196), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 33/80 (41%), Positives = 60/80 (75%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + + Y A+++E+VRSG++AVP+GQ EA+ + G T+ + +++PQ +R I+PP+T+Q Sbjct: 122 LGVGAYHGAYVSEVVRSGILAVPKGQFEASASQGFTYIQQMYYIIVPQTIRIILPPMTNQ 181 Query: 331 YLNLLKNSSLAVAVGFADLV 350 +NL+KN+S+ + VG A+L+ Sbjct: 182 MVNLIKNTSVLLIVGGAELM 201 Score = 43.9 bits (102), Expect = 0.043, Method: Compositional matrix adjust. Identities = 23/58 (39%), Positives = 37/58 (63%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 GFV T ++ ++ ATI GT+ G S K++ R+YVE+F+N+P ++ IFFL+ Sbjct: 47 GFVYTLEVSVLALLIATIFGTIGGVMATSRFKVIRAYTRIYVELFQNVPLVIQIFFLF 104 >gi|300768251|ref|ZP_07078156.1| glutamine ABC superfamily ATP binding cassette transporter, substrate binding and permease protein [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|300494315|gb|EFK29478.1| glutamine ABC superfamily ATP binding cassette transporter, substrate binding and permease protein [Lactobacillus plantarum subsp. plantarum ATCC 14917] Length = 491 Score = 80.1 bits (196), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 59/196 (30%), Positives = 107/196 (54%), Gaps = 17/196 (8%) Query: 192 FSFVLGIVLSLFATRLSRHFHEKTG-KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 F F++GI+L+L R+++ KT + L Y+ I G P +V + Y F Sbjct: 303 FGFIIGILLAL--ARMAKGNPLKTAIRWLATAYVE--FIRGTPMMVQVMFVY---FG--- 352 Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 LG F + P S IA+S + A++AE +R G+ +V GQ EAA +LG+++ + Sbjct: 353 LGLFVNL------PALTSGIIAISLNSGAYVAEYIRGGINSVDVGQTEAARSLGMSNGET 406 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370 R V+LPQA+++I P L ++++ L+K+SS+ +G +L+ + + T + + I++ Sbjct: 407 MRYVVLPQALKNIWPSLGNEFITLIKDSSIVSIIGVTELIYQSNIVRSDTYRGVAPIVVI 466 Query: 371 MFIYLSLSIMIALFMN 386 M +Y L+ + +N Sbjct: 467 MVLYFILTFTASRILN 482 >gi|15924848|ref|NP_372382.1| glutamine-binding periplasmic protein [Staphylococcus aureus subsp. aureus Mu50] gi|15927432|ref|NP_374965.1| hypothetical protein SA1675 [Staphylococcus aureus subsp. aureus N315] gi|156980174|ref|YP_001442433.1| hypothetical protein SAHV_1843 [Staphylococcus aureus subsp. aureus Mu3] gi|13701651|dbj|BAB42944.1| SA1675 [Staphylococcus aureus subsp. aureus N315] gi|14247630|dbj|BAB58020.1| similar to glutamine-binding periplasmic protein [Staphylococcus aureus subsp. aureus Mu50] gi|156722309|dbj|BAF78726.1| hypothetical protein [Staphylococcus aureus subsp. aureus Mu3] gi|285817538|gb|ADC38025.1| Glutamate ABC transporter, periplasmic glutamine-binding protein [Staphylococcus aureus 04-02981] Length = 441 Score = 80.1 bits (196), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 49/130 (37%), Positives = 80/130 (61%), Gaps = 16/130 (12%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IAL ++A+IAEI+R+G+ AV +GQMEAA +LGL +R+ + V++PQA+++I+P L ++ Sbjct: 316 IALVINSSAYIAEIIRAGINAVDKGQMEAARSLGLNYRQTMKSVIMPQAIKNILPALGNE 375 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIIN-QTGQAIEI-----ILIWMFIYLSLSIMIALF 384 ++ L+K SS+ +G VG + N Q Q I +L+ +Y L+ ++ Sbjct: 376 FVTLIKESSIVSTIG------VGEIMFNAQVVQGISFDPFTPLLVAAALYFVLTFVLTRI 429 Query: 385 MN----RLNA 390 MN RLNA Sbjct: 430 MNMIEGRLNA 439 Score = 44.3 bits (103), Expect = 0.035, Method: Compositional matrix adjust. Identities = 21/67 (31%), Positives = 37/67 (55%) Query: 83 SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142 S Y + L G T ++ G+ +I+G V +LS K+++WI +Y+E+ R P L Sbjct: 231 SKYGSFFLKGIKITILISLIGVALGSILGAFVALMKLSKIKIISWIASIYIEILRGTPML 290 Query: 143 VVIFFLY 149 V +F ++ Sbjct: 291 VQVFIVF 297 >gi|304395813|ref|ZP_07377696.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea sp. aB] gi|304357107|gb|EFM21471.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea sp. aB] Length = 219 Score = 80.1 bits (196), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 40/129 (31%), Positives = 80/129 (62%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + + + + A+IAEI R ++++ +G EA +ALGL+ R+ R V++P A+R ++P Sbjct: 90 FSAAVVTIMINSGAYIAEITRGAVLSINKGFREAGLALGLSSRETLRYVIMPLALRRMLP 149 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PL +Q++ +K++SL + +G A+L G II +A+EI IYL ++++++ + Sbjct: 150 PLGNQWIVSIKDTSLFIVIGVAELTRQGQEIIAGNFRALEIWSAVAIIYLVITLVLSFVL 209 Query: 386 NRLNAKIAL 394 R+ ++ + Sbjct: 210 RRIEKRVKI 218 >gi|239907731|ref|YP_002954472.1| amino acid ABC transporter permease protein [Desulfovibrio magneticus RS-1] gi|239797597|dbj|BAH76586.1| amino acid ABC transporter permease protein [Desulfovibrio magneticus RS-1] Length = 270 Score = 80.1 bits (196), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 42/133 (31%), Positives = 80/133 (60%), Gaps = 4/133 (3%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P+ ++ I++S A++ E+ R+G+ A+ GQ EAA +LG T + V+LPQA R+I Sbjct: 136 PDLLAAVISMSVCYGAYMGEVFRAGITAIAVGQTEAARSLGFTRSQTMYYVILPQAWRTI 195 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE----IILIWMFIYLSLSI 379 +PP+ ++++ LLK++SL +G ADL+ G +++ E + ++++ I L LS Sbjct: 196 LPPVGNEFIALLKDTSLVSILGVADLLRRGREFASESFLYFETFTMVAVVYLIITLILSK 255 Query: 380 MIALFMNRLNAKI 392 +++ RL+ + Sbjct: 256 LVSFMEERLSHHV 268 Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 26/69 (37%), Positives = 42/69 (60%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151 G + TF + S + A +IG + G GR+S NK + + YVEV R +P LV +F++Y + Sbjct: 69 GILVTFQVTVSAIALALVIGLITGLGRISRNKYINLVASTYVEVVRGVPLLVQLFYIYYA 128 Query: 152 VLSVLPIPD 160 + V+ +PD Sbjct: 129 LGRVVHVPD 137 >gi|72161212|ref|YP_288869.1| amino acid ABC transporter permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Thermobifida fusca YX] gi|71914944|gb|AAZ54846.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Thermobifida fusca YX] Length = 224 Score = 80.1 bits (196), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 54/165 (32%), Positives = 88/165 (53%), Gaps = 27/165 (16%) Query: 191 VFSFVLGIVLSLFATRLS--------RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY 242 +FSF+LG++L+ A R+S + +T + PL + F GL + + ++L Sbjct: 27 LFSFILGVILT--AMRVSPIGLLRGVSTVYVETVRNSPLTLVLLFCGLGLNSALGLSLAD 84 Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302 + +D F I LS YTA F++E +RSG+ +P GQ EAA + Sbjct: 85 SVAWDV-----------------FWWAVIGLSAYTACFVSETLRSGINTIPVGQAEAARS 127 Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347 LGLT + RL+++PQA+R++I PL S + L+KN+++A G Sbjct: 128 LGLTFTQILRLIIIPQALRTVIGPLGSVLIALIKNTTVASVAGLG 172 >gi|123442745|ref|YP_001006722.1| putative amino-acid ABC transporter (permease) [Yersinia enterocolitica subsp. enterocolitica 8081] gi|122089706|emb|CAL12558.1| putative amino-acid ABC transporter (permease) [Yersinia enterocolitica subsp. enterocolitica 8081] gi|318605288|emb|CBY26786.1| cystine ABC transporter, permease protein [Yersinia enterocolitica subsp. palearctica Y11] Length = 220 Score = 80.1 bits (196), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 60/207 (28%), Positives = 109/207 (52%), Gaps = 18/207 (8%) Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251 F LG +L++ RLSR LPL +S F + LIA + +++ P Sbjct: 32 FGLALGFMLAMM--RLSRF--------LPLSLLSRFYVSIFRGTPLIAQLFMIYYGLP-- 79 Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311 QF G + P +L I LS TAA+ +E +R+ + ++ +GQ EAA ++G+T + Sbjct: 80 -QF----GIELDPMPAAL-IGLSLNTAAYTSETLRAAISSIEKGQWEAAASIGMTRWQTL 133 Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371 V+LPQA R+ +PPL + ++ L+K++SLA + +L + ++T + + L Sbjct: 134 YRVILPQAGRTALPPLGNSFIGLVKDTSLAATIQVPELFRQAQLVTSRTLEVFTMYLAAS 193 Query: 372 FIYLSLSIMIALFMNRLNAKIALKEKK 398 IY ++ +++ NRL A + ++++ Sbjct: 194 LIYWIMATLLSALQNRLEAHVNRQDQE 220 >gi|225350854|ref|ZP_03741877.1| hypothetical protein BIFPSEUDO_02428 [Bifidobacterium pseudocatenulatum DSM 20438] gi|225158310|gb|EEG71552.1| hypothetical protein BIFPSEUDO_02428 [Bifidobacterium pseudocatenulatum DSM 20438] Length = 327 Score = 80.1 bits (196), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 50/138 (36%), Positives = 80/138 (57%), Gaps = 1/138 (0%) Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312 +F I +V F + ++ L+ AA++AEIVR+GL AV GQ EAA ALG+ R Sbjct: 144 EFWSIDSQSVITAFNAAWLGLALNEAAYLAEIVRAGLEAVDPGQTEAAKALGMKRSMIMR 203 Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA-DLVSVGGTIINQTGQAIEIILIWM 371 V+LPQAMR IIPP ++++ +LK +SL AV F +L I + + I ++++ Sbjct: 204 RVVLPQAMRIIIPPTGNEFIGMLKTTSLVNAVPFTLELQFATTAIATRLYKPIPLLIVAC 263 Query: 372 FIYLSLSIMIALFMNRLN 389 YL ++ ++ + +RL Sbjct: 264 IWYLVITSILMVLQSRLE 281 >gi|161506724|ref|YP_001576674.1| amino acid ABC transporter permease protein [Lactobacillus helveticus DPC 4571] gi|160347713|gb|ABX26387.1| amino acid ABC transporter permease protein [Lactobacillus helveticus DPC 4571] Length = 537 Score = 80.1 bits (196), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 43/126 (34%), Positives = 78/126 (61%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I +S T A++AE++R G+I+ P GQ EAA ALG+TH + ++LPQA+++ +P +T++ Sbjct: 391 IIVSINTGAYLAEVIRGGIISTPEGQFEAASALGMTHSQKMWHIILPQAIKNCLPSITNE 450 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++ +K++S+ + ++L VG TI +Q+ + L+ IYL L+ I N + Sbjct: 451 FIVNIKDTSVLSIISVSELFFVGTTIASQSFKFFPTYLMISAIYLILTFTITRIFNFIEK 510 Query: 391 KIALKE 396 K+ K+ Sbjct: 511 KLEGKK 516 Score = 37.4 bits (85), Expect = 4.1, Method: Compositional matrix adjust. Identities = 28/93 (30%), Positives = 40/93 (43%), Gaps = 10/93 (10%) Query: 67 RAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVG----------A 116 +AG E + T+ Y I+ G T LA G + IG L+G Sbjct: 280 KAGNETKKENWLVTTWKQYGGMIMSGIGMTLLLALVGTVVGFFIGLLIGIVRTIPTPTTR 339 Query: 117 GRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 G+ A +V W+ VYVE+FR P +V +Y Sbjct: 340 GKRWALNVVKWLLSVYVEIFRGTPMMVQAAVIY 372 >gi|253991464|ref|YP_003042820.1| amino acid ABC transporter extracellular solute-binding protein [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253782914|emb|CAQ86079.1| similar to extracellular solute-binding protein-amino acid abc transporter [Photorhabdus asymbiotica] Length = 233 Score = 80.1 bits (196), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 64/206 (31%), Positives = 105/206 (50%), Gaps = 16/206 (7%) Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV-LIALKYQLHFDKPVL 251 +F LGI+L F L R + K A+ Y+ +LI G P LV L + Y L L Sbjct: 31 TFTLGIILG-FIVALIRLYGPKPFVAVAKFYV--WLIRGTPLLVQLFLIFYALPSVGITL 87 Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311 G F S I + A+ +E++R+ L++VP+GQ EAA ++G++ ++ Sbjct: 88 GAFT------------SAVIGFTLNIGAYTSEVIRATLLSVPKGQWEAAYSIGMSWTQSL 135 Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371 R ++LPQA R IPPL++ +++L+K++SLA + +L I T Q + + Sbjct: 136 RRIILPQAARIAIPPLSNTFISLVKDTSLASVITVPELFLAAQRIAAVTYQPLILYTEAA 195 Query: 372 FIYLSLSIMIALFMNRLNAKIALKEK 397 IYL +S +++ RL K + K Sbjct: 196 IIYLIISSVLSSLQARLEKKFSQKSD 221 >gi|315644843|ref|ZP_07897972.1| polar amino acid ABC transporter, inner membrane subunit [Paenibacillus vortex V453] gi|315279785|gb|EFU43086.1| polar amino acid ABC transporter, inner membrane subunit [Paenibacillus vortex V453] Length = 219 Score = 80.1 bits (196), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 49/135 (36%), Positives = 80/135 (59%), Gaps = 1/135 (0%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G V P F S + L YTAAFIAE +R+G+ AVP GQ EAA + GL++ + R ++LPQ Sbjct: 83 GVPVDP-FTSGTLGLMVYTAAFIAEAIRAGIQAVPSGQTEAARSSGLSYVQNMRYIILPQ 141 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378 A++ ++P + +Q +NL+KNSS+ + DL+ I T + I + YL L+ Sbjct: 142 AVKIVLPAIGNQLINLVKNSSVLGVIAGLDLMYYADLINLSTFKGIPVYTFVALFYLLLT 201 Query: 379 IMIALFMNRLNAKIA 393 + ++L ++ + + A Sbjct: 202 VPLSLAVHYMERRFA 216 >gi|192291212|ref|YP_001991817.1| polar amino acid ABC transporter inner membrane subunit [Rhodopseudomonas palustris TIE-1] gi|192284961|gb|ACF01342.1| polar amino acid ABC transporter, inner membrane subunit [Rhodopseudomonas palustris TIE-1] Length = 501 Score = 80.1 bits (196), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 40/96 (41%), Positives = 62/96 (64%) Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315 F+ G+ M + I ++ + A+ AE++R GL A+PRGQ EAA ALGL++ K T L++ Sbjct: 354 FLPGNFTIDNLMRVLIGIALFAGAYNAEVIRGGLNAIPRGQAEAASALGLSYWKITGLIV 413 Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 LPQA+R +IP L + ++ L K++SL V DL+ Sbjct: 414 LPQALRHVIPGLVNSFIALFKDTSLVSIVALFDLLG 449 >gi|139439418|ref|ZP_01772859.1| Hypothetical protein COLAER_01879 [Collinsella aerofaciens ATCC 25986] gi|133775197|gb|EBA39017.1| Hypothetical protein COLAER_01879 [Collinsella aerofaciens ATCC 25986] Length = 248 Score = 80.1 bits (196), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 43/125 (34%), Positives = 72/125 (57%), Gaps = 3/125 (2%) Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329 ++ + Y AA+I+E++R+G+ AVPRGQMEAA + G T +A ++LPQ + I+PPL + Sbjct: 107 FLGVGLYHAAYISEVIRTGIEAVPRGQMEAAQSQGFTRAQAYWYIVLPQTFKIILPPLCN 166 Query: 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQTG---QAIEIILIWMFIYLSLSIMIALFMN 386 Q LNL+KN+S+ V DL+ ++ G I L++ I L++++ Sbjct: 167 QALNLVKNTSVLALVAGGDLMYRSDNFVSLYGYLQGYIVCCLMYFIICFPLAMLVQWLER 226 Query: 387 RLNAK 391 R + Sbjct: 227 RSKER 231 >gi|116254361|ref|YP_770199.1| transmembrane component of transporter [Rhizobium leguminosarum bv. viciae 3841] gi|115259009|emb|CAK10118.1| putative transmembrane component of transporter [Rhizobium leguminosarum bv. viciae 3841] Length = 226 Score = 80.1 bits (196), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 60/203 (29%), Positives = 107/203 (52%), Gaps = 14/203 (6%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 + SF G+ L L AT + R F A+ Y+ ++I G P LV + + + + P Sbjct: 28 LLSFAFGLTLGL-ATAIGRLFGPMPLSAVARFYV--WVIRGTPLLVQL---FVIFYGLPS 81 Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 LG + F + I + A+ +EI+R+ + +VP+GQ EAA ++G++ R+A Sbjct: 82 LG--------ILLDAFPAALIGFTLNIGAYSSEIIRAVISSVPKGQWEAAYSIGMSWRQA 133 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370 +LPQA R +PPL++ +++L+K++SLA A+ +L I+ T + + + + Sbjct: 134 MSRTILPQAARVAVPPLSNTFISLVKDTSLAAAITVPELFQAAQRIVATTYEPLILYIEA 193 Query: 371 MFIYLSLSIMIALFMNRLNAKIA 393 IYL LS +++ RL + A Sbjct: 194 ALIYLVLSSVLSQLQVRLERRFA 216 >gi|309790934|ref|ZP_07685476.1| polar amino acid ABC transporter, inner membrane subunit [Oscillochloris trichoides DG6] gi|308227048|gb|EFO80734.1| polar amino acid ABC transporter, inner membrane subunit [Oscillochloris trichoides DG6] Length = 266 Score = 80.1 bits (196), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 62/215 (28%), Positives = 114/215 (53%), Gaps = 12/215 (5%) Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALK 241 T+ A F+F+ + G+ L L R + L + YI I G+P LVLI Sbjct: 62 TLYVTAVSFIFALIFGLFLGL-----GRVASNPIIRNLTITYIE--FIRGVPMLVLI--- 111 Query: 242 YQLHFDK-PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300 + + F P+ + + + +S ++ IAL A+IAEI R+G+ ++ RGQ EAA Sbjct: 112 FTISFAVVPLFAESFGLANNAISLTTRAI-IALVLIYGAYIAEIFRAGIESISRGQSEAA 170 Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 +LG++ +A V+LPQA+R+++P L + + LLK++SL +G ++ V ++ + Sbjct: 171 RSLGMSRAQAMFYVILPQAVRNVMPALGNDLIALLKDTSLVSVLGVREMTQVARLSVSTS 230 Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395 + E I YLS++++++L + L ++ + Sbjct: 231 FRYEETYFILTLFYLSMTLVLSLILQWLQRRVGAR 265 Score = 36.2 bits (82), Expect = 8.7, Method: Compositional matrix adjust. Identities = 20/58 (34%), Positives = 32/58 (55%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIF 146 IL G T ++ I A I G +G GR+++N ++ + Y+E R +P LV+IF Sbjct: 55 ILQGLGTTLYVTAVSFIFALIFGLFLGLGRVASNPIIRNLTITYIEFIRGVPMLVLIF 112 >gi|229591529|ref|YP_002873648.1| putative ABC transporter permease [Pseudomonas fluorescens SBW25] gi|229363395|emb|CAY50556.1| putative permease component of ABC transporter [Pseudomonas fluorescens SBW25] Length = 258 Score = 80.1 bits (196), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 42/127 (33%), Positives = 74/127 (58%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IAL A++AEI+R+G+ AV +GQ EA +LG+ K R ++LPQA R I+PPL ++ Sbjct: 109 IALGLNEGAYMAEIIRAGIGAVDKGQYEAGRSLGMGFAKLMRRIVLPQAFRVIVPPLGNE 168 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 + +LKN++L +G +L+ I + T + E+ L+ +L+L+ + F L Sbjct: 169 FNVMLKNTTLVSVIGVQELLLSTQMITSATFRVFELYLVVALYFLTLTTLWGFFQRWLET 228 Query: 391 KIALKEK 397 + + ++ Sbjct: 229 RFSQSDR 235 >gi|292670308|ref|ZP_06603734.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Selenomonas noxia ATCC 43541] gi|292648039|gb|EFF66011.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Selenomonas noxia ATCC 43541] Length = 214 Score = 80.1 bits (196), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 58/174 (33%), Positives = 95/174 (54%), Gaps = 18/174 (10%) Query: 188 KIFVFSFVLGIVLSLFAT--RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH 245 +IF + L + L LFA RLSR F + LL + +++ G P ++ + Y Sbjct: 20 EIFCVTLALSLPLGLFAALGRLSR-FRILSR----LLEVYIWIMRGTPLMLQLLFVY--- 71 Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305 F P++G + P+ + +A AA+ AEI RSG+ AVPRGQ EAA LG+ Sbjct: 72 FALPMIG--------IMLPDIAAALLAFVLNYAAYFAEIFRSGIQAVPRGQFEAARVLGM 123 Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359 + R ++LPQ +R +PP++++ +NL+K++SL + DL+ V TI+ + Sbjct: 124 SAPLTMRRIILPQVLRITLPPVSNETINLVKDTSLVYILAMNDLLRVARTIVQR 177 >gi|291616399|ref|YP_003519141.1| GlnQ [Pantoea ananatis LMG 20103] gi|291151429|gb|ADD76013.1| GlnQ [Pantoea ananatis LMG 20103] gi|327392843|dbj|BAK10265.1| glutamine transport ATP-binding protein GlnQ GlnQ [Pantoea ananatis AJ13355] Length = 519 Score = 80.1 bits (196), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 60/210 (28%), Positives = 107/210 (50%), Gaps = 22/210 (10%) Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST----FLIFGLPTLVLIALKYQLHFDK 248 S + G +L+L + SRH PLL + +L LP LVL+ Y L Sbjct: 47 SIIAGFILAL--AKQSRH---------PLLTLPARFYIWLFRSLPLLVLLIFVYNLPQAV 95 Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308 P + +S F + +IAL+ +A+IAEI R GL+++PRGQ EAA ALGL + Sbjct: 96 PATS-------AILSDPFWAGFIALTICESAYIAEIHRGGLLSIPRGQSEAARALGLRYA 148 Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368 +++PQA+R +P L ++Y+ ++K +SL + +++ VG + +Q +E + Sbjct: 149 GIQWRIIIPQALRVALPALANEYIAIVKLTSLVSVISLTEILMVGQRLYSQNFLVMETMA 208 Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 F Y+ + + + +L + + +++ Sbjct: 209 AVAFYYVLIVTVFDFLLKQLERYLDVTQRQ 238 >gi|229009851|ref|ZP_04167071.1| Amino acid ABC transproter, permease [Bacillus mycoides DSM 2048] gi|228751469|gb|EEM01275.1| Amino acid ABC transproter, permease [Bacillus mycoides DSM 2048] Length = 230 Score = 80.1 bits (196), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 46/128 (35%), Positives = 75/128 (58%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IAL+ + A+I EI R + +V RGQ+EAA +LG+ + A R ++LPQA R +PPL +Q Sbjct: 89 IALAIHNGAYITEIFRGSIQSVDRGQLEAARSLGMPYPLAMRRIILPQAFRLSLPPLGNQ 148 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++ LK+SSL VG ++L G +I Q ++ +I YL+L ++ ++ L Sbjct: 149 FIIGLKDSSLVAYVGMSELWGSGLSIAAGNFQQLDTYIIVGVYYLALVLLFTYLVSLLEK 208 Query: 391 KIALKEKK 398 ++ KE Sbjct: 209 RLQRKENN 216 >gi|328887001|emb|CCA60240.1| putative glutamate transport protein [Streptomyces venezuelae ATCC 10712] Length = 221 Score = 80.1 bits (196), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 53/151 (35%), Positives = 88/151 (58%), Gaps = 5/151 (3%) Query: 251 LGQFNFIGGSTVSPEFMSL-----YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305 LG F +G + F ++ + L+ YT+AF+ E +RSG+ VP GQ+EAA A+GL Sbjct: 71 LGLFQTLGVDMGADRFTTINFRLAVLGLTAYTSAFVCEALRSGINTVPLGQVEAARAIGL 130 Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365 + RL++LPQA RS++ PL + + L KN+++A A+G A+ + +I Q I Sbjct: 131 NFPQVLRLIVLPQAFRSVVGPLANVLIALTKNTTVAAAIGVAEAALLMREMIENEAQLIL 190 Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 I I+ F ++ L++ LF+ + K+A+K Sbjct: 191 ISTIFAFGFICLTLPTGLFLGWVAKKVAVKR 221 >gi|331698685|ref|YP_004334924.1| polar amino acid ABC transporter inner membrane subunit [Pseudonocardia dioxanivorans CB1190] gi|326953374|gb|AEA27071.1| polar amino acid ABC transporter, inner membrane subunit [Pseudonocardia dioxanivorans CB1190] Length = 336 Score = 80.1 bits (196), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 69/233 (29%), Positives = 115/233 (49%), Gaps = 32/233 (13%) Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF----LIFGLPTLV 236 +T+ A VF + G+VL+L RLSR P+L + ++ L +P +V Sbjct: 91 ITLKVTALSAVFGLLGGVVLAL--CRLSRS---------PVLQLVSWGYVWLFRSVPLIV 139 Query: 237 LIALKYQLHFDKPVLG----------QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286 L+ Y P LG QF+ + ++ E + + LS AA+ AE+VR Sbjct: 140 LLLFLYNFSALYPSLGLGVPFGPTFVQFD---ETALATEIVIAVVGLSLNEAAYAAEVVR 196 Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346 G+++V +GQ EAA ALGL R R ++ PQA+RSI+P +Q + L+K++SL V Sbjct: 197 GGILSVDQGQHEAAAALGLPRRYQFRRIVAPQALRSIVPNYVNQLIGLIKSTSLVFYVSL 256 Query: 347 ADLV----SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395 DL S+G T + + +W I S+ ++ ++ R A+ +++ Sbjct: 257 LDLFGQVQSLGSTYPGDIVPLLMVATVWYVILTSIVSVVQYYVERRFARGSVR 309 >gi|56697223|ref|YP_167588.1| amino acid ABC transporter, permease protein [Ruegeria pomeroyi DSS-3] gi|56678960|gb|AAV95626.1| amino acid ABC transporter, permease protein [Ruegeria pomeroyi DSS-3] Length = 375 Score = 80.1 bits (196), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 59/211 (27%), Positives = 110/211 (52%), Gaps = 18/211 (8%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 + S LG++L+L RH+ KA+ + +I L+ G+P LI + + P+ Sbjct: 180 IVSIPLGVLLAL-----GRHYGSPAVKAICVAFIE--LVRGVP---LITILFMASVMMPL 229 Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 F+ V + + I + +++A++AE+VR GL A+P+GQ EA++ALG++ + Sbjct: 230 -----FLPPDLVINNLLRIQIGMILFSSAYMAEVVRGGLQAIPKGQTEASLALGVSPART 284 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS-VGGTIINQT--GQAIEII 367 V++PQA+R ++PPL + + L K++SL + VG D + V G ++ G E Sbjct: 285 IIFVVVPQALRHVLPPLIGRCIALFKDTSLVIIVGLLDFLGMVRGAALDPEWLGFQAEAY 344 Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 + F+Y + ++L+ L + K+ Sbjct: 345 VFAAFVYWLICYSLSLYGRALERRGPAGSKR 375 >gi|311695085|gb|ADP97958.1| amino acid ABC transporter, permease protein [marine bacterium HP15] Length = 362 Score = 80.1 bits (196), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 43/130 (33%), Positives = 78/130 (60%), Gaps = 3/130 (2%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I ++ + +A++AE++R GL A+PRGQ EAA ALGL + + LV+LPQA++ +IP + + Sbjct: 232 IGITLWQSAYMAEVIRGGLQAIPRGQYEAADALGLGYWRKMGLVILPQALKMVIPGIVNT 291 Query: 331 YLNLLKNSSLAVAVGFADLV-SVGGTIINQTGQ--AIEIILIWMFIYLSLSIMIALFMNR 387 +++L K+++L + +G D++ +V T+ + Q AIE + F + I+ + Sbjct: 292 FISLFKDTTLVLIIGLFDILGTVQSTVTDPAWQNVAIEGYVFVAFCFWVFCFGISRYSQN 351 Query: 388 LNAKIALKEK 397 L K+ K Sbjct: 352 LERKLDTGHK 361 Score = 37.7 bits (86), Expect = 3.0, Method: Compositional matrix adjust. Identities = 25/69 (36%), Positives = 41/69 (59%), Gaps = 2/69 (2%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151 G + T LA+ G+I + IG L+ GR S ++ IC V++EV+R +P + V+F S Sbjct: 154 GLMLTLILAYIGIIASLPIGILLALGRRSDMPIIRGICVVFIEVWRAVPLITVLFM--AS 211 Query: 152 VLSVLPIPD 160 V+ L +P+ Sbjct: 212 VMLPLFLPE 220 >gi|168334973|ref|ZP_02693091.1| polar amino acid ABC transporter, inner membrane subunit [Epulopiscium sp. 'N.t. morphotype B'] Length = 235 Score = 80.1 bits (196), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 42/135 (31%), Positives = 82/135 (60%), Gaps = 2/135 (1%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P M IA + A+++E++R G+ ++ RGQ EA +LGL++ + L++LPQA R + Sbjct: 102 PRVMVGGIAFGINSGAYMSEVIRGGITSIDRGQTEAGRSLGLSYFQTMHLIILPQAFRQM 161 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM-FIYLSLSIMIA 382 +P L ++++NL+K +++ +G DL+ +I+ T EI LI + IYL+++ ++ Sbjct: 162 LPSLVNEFINLIKETAIIGFIGGMDLMKAANILISTT-YNFEIPLIMVALIYLTITSILT 220 Query: 383 LFMNRLNAKIALKEK 397 FM + K++ + + Sbjct: 221 YFMRGIENKLSKQNR 235 Score = 37.4 bits (85), Expect = 4.6, Method: Compositional matrix adjust. Identities = 28/87 (32%), Positives = 41/87 (47%), Gaps = 9/87 (10%) Query: 82 DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGA-GRLSAN--------KLVAWICRVY 132 D Y IL G NT L+ I IG +V G L + K++ I +VY Sbjct: 16 DGGYIFTILDGLYNTLLLSLIATIIGLAIGLVVAVIGMLESKGTIENSILKVLKIIAKVY 75 Query: 133 VEVFRNIPPLVVIFFLYKSVLSVLPIP 159 V++ R P +V + FL+ VL+ L +P Sbjct: 76 VDIIRGTPAVVQVSFLWLVVLAPLNLP 102 >gi|323441690|gb|EGA99335.1| substrate-binding glutamine ABC transporter [Staphylococcus aureus O46] Length = 467 Score = 80.1 bits (196), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 43/124 (34%), Positives = 78/124 (62%), Gaps = 4/124 (3%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IAL ++A+IAEI+R+G+ AV +GQMEAA +LGL +R+ + V++PQA+++I+P L ++ Sbjct: 342 IALVINSSAYIAEIIRAGINAVDKGQMEAARSLGLNYRQTMKSVIMPQAIKNILPALGNE 401 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN---- 386 ++ L+K SS+ +G +++ + + +L+ +Y L+ ++ MN Sbjct: 402 FVTLIKESSIVSTIGVGEIMFNAQVVQGISFDPFTPLLVAAALYFVLTFVLTRIMNMIEG 461 Query: 387 RLNA 390 RLNA Sbjct: 462 RLNA 465 Score = 43.9 bits (102), Expect = 0.046, Method: Compositional matrix adjust. Identities = 21/67 (31%), Positives = 37/67 (55%) Query: 83 SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142 S Y + L G T ++ G+ +I+G V +LS K+++WI +Y+E+ R P L Sbjct: 257 SKYGSFFLKGIKITILISLIGVALGSILGAFVALMKLSKIKVISWIASIYIEILRGTPML 316 Query: 143 VVIFFLY 149 V +F ++ Sbjct: 317 VQVFIVF 323 >gi|229083652|ref|ZP_04215977.1| Amino acid ABC transproter, permease [Bacillus cereus Rock3-44] gi|228699670|gb|EEL52330.1| Amino acid ABC transproter, permease [Bacillus cereus Rock3-44] Length = 230 Score = 80.1 bits (196), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 45/126 (35%), Positives = 77/126 (61%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IAL+ + A+I EI R + +V RGQ+EAA +LG+++ A R ++LPQA+R IPPL +Q Sbjct: 89 IALAIHNGAYITEIFRGSIQSVDRGQLEAARSLGMSYPLAMRRIILPQALRLSIPPLGNQ 148 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++ LK+SSL VG ++L G +I + +E ++ YL+L ++ ++ L Sbjct: 149 FVIGLKDSSLVAYVGMSELWGSGLSIAAGNFKQLETYIVVSAYYLALVLLFTYLVSLLEK 208 Query: 391 KIALKE 396 ++ K+ Sbjct: 209 RLQRKQ 214 >gi|91786312|ref|YP_547264.1| amino acid ABC transporter permease [Polaromonas sp. JS666] gi|91695537|gb|ABE42366.1| amino acid ABC transporter membrane protein, PAAT family [Polaromonas sp. JS666] Length = 273 Score = 80.1 bits (196), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 48/117 (41%), Positives = 72/117 (61%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 +F S +AL+ A+ AE +RSGL+AVP+GQ+EAA +LGL+ V PQA + + Sbjct: 139 DFSSACVALAFNAGAYNAEAIRSGLLAVPKGQIEAARSLGLSSFFTFIDVTFPQAFKISL 198 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 PPL + + LLK+SSLA A+G +L +VG I T Q + ++ IYL L+ ++ Sbjct: 199 PPLVNNTVALLKDSSLAYAIGVVELTNVGNRIQAATFQPLPTLVTTAVIYLVLTTVL 255 >gi|323492218|ref|ZP_08097376.1| amino acid ABC transporter, permease protein [Vibrio brasiliensis LMG 20546] gi|323313531|gb|EGA66637.1| amino acid ABC transporter, permease protein [Vibrio brasiliensis LMG 20546] Length = 303 Score = 80.1 bits (196), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 45/138 (32%), Positives = 80/138 (57%), Gaps = 1/138 (0%) Query: 255 NFI-GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313 NF+ G +++ +S + + ++A++AE+VRSGL +V +GQ EAA +LGL+ R Sbjct: 159 NFLFGPASLWENLLSGILCVGLLSSAYVAEVVRSGLSSVAQGQWEAADSLGLSSWAKYRY 218 Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI 373 V+ PQ + +I P L Q ++L+K++S+ + ++ VG I N +G EI LI Sbjct: 219 VIAPQVLAAITPALAGQAISLIKDTSIVSLISIQEMTFVGTEIANSSGLIFEIWLIVGLA 278 Query: 374 YLSLSIMIALFMNRLNAK 391 Y +L + ++L R+ + Sbjct: 279 YFTLCMSLSLLFKRIEKR 296 >gi|291519683|emb|CBK74904.1| amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Butyrivibrio fibrisolvens 16/4] Length = 501 Score = 80.1 bits (196), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 48/160 (30%), Positives = 91/160 (56%), Gaps = 20/160 (12%) Query: 203 FATRLSRHFHEKTG-----KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFI 257 F + R H+KTG A+ LY++ +I G P ++ + + Y + F Sbjct: 316 FVVAIIRVTHDKTGGWGIANAICKLYLA--IIRGTPIMIQLLIIYYVVF----------- 362 Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317 + P+ + IA + + A++AEI+R G++++ GQMEA +LGLT+++ ++LP Sbjct: 363 -AAVNVPKVLVAIIAFAINSGAYVAEIMRGGIMSIDDGQMEAGRSLGLTYKQTMISIILP 421 Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII 357 QA+++++P L +++++L+K +S+ +G DL GG II Sbjct: 422 QAIKNVLPALGNEFISLIKETSICGYIGLMDLTR-GGDII 460 Score = 44.7 bits (104), Expect = 0.024, Method: Compositional matrix adjust. Identities = 53/211 (25%), Positives = 90/211 (42%), Gaps = 39/211 (18%) Query: 82 DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAW-----ICRVYVEVF 136 D S T IL G NT +A ++ IIG +V R++ +K W IC++Y+ + Sbjct: 286 DDSRWTYILKGLQNTLLIALCAVLAGMIIGFVVAIIRVTHDKTGGWGIANAICKLYLAII 345 Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196 R P ++ + +Y V + + +P +++ F N G +V + Sbjct: 346 RGTPIMIQLLIIYYVVFAAVNVP--KVLVAIIAFAINSGA-------------YVAEIMR 390 Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256 G ++S+ ++ + G++L L Y T + LP A+K L P LG F Sbjct: 391 GGIMSIDDGQM------EAGRSLGLTYKQTMISIILPQ----AIKNVL----PALGN-EF 435 Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287 I S + + YI L T +I+RS Sbjct: 436 I--SLIKETSICGYIGLMDLTRG--GDIIRS 462 >gi|157165284|ref|YP_001466153.1| glutamine-binding periplasmic protein/glutamine transport system permease protein [Campylobacter concisus 13826] gi|112800385|gb|EAT97729.1| L-cystine transport system permease protein TcyB [Campylobacter concisus 13826] Length = 222 Score = 80.1 bits (196), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 39/123 (31%), Positives = 76/123 (61%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IA S A+ +E VR+ +++VP+GQ EAA +LG+TH + + ++ PQA+R +PPL++ Sbjct: 97 IAFSLNVGAYASESVRAAILSVPKGQWEAATSLGMTHYQILKRIIAPQAVRISLPPLSNT 156 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++ L+K++SLA ++ D+ V I +T + + + ++ IYL + ++ +RL Sbjct: 157 FIGLVKDTSLAASITMVDMFMVAQRIAARTFEPLILYILAALIYLVVCTLLTYLQSRLEK 216 Query: 391 KIA 393 ++ Sbjct: 217 AVS 219 >gi|284163419|ref|YP_003401698.1| polar amino acid ABC transporter inner membrane protein [Haloterrigena turkmenica DSM 5511] gi|284013074|gb|ADB59025.1| polar amino acid ABC transporter, inner membrane subunit [Haloterrigena turkmenica DSM 5511] Length = 277 Score = 79.7 bits (195), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 59/195 (30%), Positives = 101/195 (51%), Gaps = 11/195 (5%) Query: 208 SRHFHEKTG---KALPLLYISTFLIFGLPTLVL----IALKYQLHFDKPVLGQFNFIGGS 260 SR F K G + P+L I + LP ++ AL L F VLG F Sbjct: 81 SRAFVRKFGVLLRGTPILVIMFITFYALPYEIVHDAVEALFSALDF---VLGPTPFTAAV 137 Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320 V F++ +AL +AA+ ++I R L ++ GQMEAA ++G++ +A R V+ PQA+ Sbjct: 138 DVPGAFVAATLALGFRSAAYQSQIFRGALQSIDEGQMEAARSIGMSRLEAIRHVIAPQAL 197 Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI-EIILIWMFIYLSLSI 379 R +P +++ +LK++S+A A+G A+L+ + Q AI E+I+ +Y L+ Sbjct: 198 RRSVPGFQNEFTIVLKDTSIAFAIGLAELLKRSEDLFTQQTTAILEVIVFISLLYFVLTF 257 Query: 380 MIALFMNRLNAKIAL 394 ++ +N + A+ Sbjct: 258 TTNRTLDYVNNRFAI 272 >gi|260461828|ref|ZP_05810074.1| polar amino acid ABC transporter, inner membrane subunit [Mesorhizobium opportunistum WSM2075] gi|319785358|ref|YP_004144834.1| polar amino acid ABC transporter inner membrane subunit [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|259032469|gb|EEW33734.1| polar amino acid ABC transporter, inner membrane subunit [Mesorhizobium opportunistum WSM2075] gi|317171246|gb|ADV14784.1| polar amino acid ABC transporter, inner membrane subunit [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 324 Score = 79.7 bits (195), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 55/168 (32%), Positives = 91/168 (54%), Gaps = 11/168 (6%) Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290 GLP LV I Y ++ P LG F S V +ALS T A++ EI R+G+ Sbjct: 168 GLPLLVQI---YLIYLGLPQLGIFINAVPSGV--------LALSLCTGAYMTEIFRAGIQ 216 Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 ++ RGQ EA+ ++G R ++LPQA+ IIPP+ + ++++LK+SSL +G +L Sbjct: 217 SIDRGQWEASRSMGFGFGLTMRRIILPQALPVIIPPMGNTFISMLKDSSLVSILGVWELT 276 Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 + T+ T Q +E+++ IY +SI + L +R+ A + + Sbjct: 277 FLARTLGQPTFQHMEMLITAAIIYWIMSICLELVQSRIERHFARSKVR 324 >gi|163858458|ref|YP_001632756.1| amino acids ABC transporter, permease protein [Bordetella petrii DSM 12804] gi|163262186|emb|CAP44488.1| amino acids ABC transporter, permease protein [Bordetella petrii] Length = 231 Score = 79.7 bits (195), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 51/131 (38%), Positives = 77/131 (58%), Gaps = 4/131 (3%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 EF IALS +A+ E +RSG+ A+P Q+EAA ++GL +A V+LPQA+R + Sbjct: 98 EFSFALIALSLNVSAYYYEDIRSGIRAIPATQVEAARSIGLGAVQALIYVVLPQAVRYAV 157 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 PP+ ++ + L K++SLA+ +G DL I N T Q +I +I IYL + AL Sbjct: 158 PPIINRSIILFKDTSLAMVIGVTDLTYQTKRIENATFQTFQIFMISTLIYLCM----ALL 213 Query: 385 MNRLNAKIALK 395 ++ L A +A K Sbjct: 214 ISALGAHLARK 224 >gi|91788588|ref|YP_549540.1| amino acid ABC transporter permease [Polaromonas sp. JS666] gi|91697813|gb|ABE44642.1| amino acid ABC transporter membrane protein, PAAT family [Polaromonas sp. JS666] Length = 255 Score = 79.7 bits (195), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 43/133 (32%), Positives = 79/133 (59%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+S +AL+ A+I+EI R+G+ ++ +GQ+EA+ +LG++ + V+LPQA R ++P Sbjct: 123 FLSGIVALTLNAGAYISEIFRAGIQSIDKGQVEASRSLGMSFPRTMYHVVLPQAFRRMLP 182 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PL + ++LLK+SSL A+G A+L T+ + E L +Y L++ +A + Sbjct: 183 PLGNNAISLLKDSSLISAIGLAELAYAARTVAGAYSRYWEPYLTISLMYWVLTLGLAYVV 242 Query: 386 NRLNAKIALKEKK 398 +L A+ + + Sbjct: 243 KKLEARYGRGDSR 255 >gi|49484100|ref|YP_041324.1| extracellular glutamine-binding protein [Staphylococcus aureus subsp. aureus MRSA252] gi|257425970|ref|ZP_05602394.1| polar amino acid ABC transporter [Staphylococcus aureus subsp. aureus 55/2053] gi|282904433|ref|ZP_06312321.1| amino acid ABC transporter, permease/substrate-binding protein [Staphylococcus aureus subsp. aureus C160] gi|282906256|ref|ZP_06314111.1| polar amino acid ABC transporter [Staphylococcus aureus subsp. aureus Btn1260] gi|282909175|ref|ZP_06316993.1| polar amino acid ABC transporter [Staphylococcus aureus subsp. aureus WW2703/97] gi|282911481|ref|ZP_06319283.1| polar amino acid ABC transporter [Staphylococcus aureus subsp. aureus WBG10049] gi|282919619|ref|ZP_06327354.1| extracellular glutamine-binding protein [Staphylococcus aureus subsp. aureus C427] gi|283958611|ref|ZP_06376062.1| amino acid ABC transporter, permease/substrate-binding protein [Staphylococcus aureus subsp. aureus A017934/97] gi|295428436|ref|ZP_06821065.1| extracellular glutamine-binding protein [Staphylococcus aureus subsp. aureus EMRSA16] gi|49242229|emb|CAG40936.1| putative extracellular glutamine-binding protein [Staphylococcus aureus subsp. aureus MRSA252] gi|257271664|gb|EEV03810.1| polar amino acid ABC transporter [Staphylococcus aureus subsp. aureus 55/2053] gi|282317429|gb|EFB47803.1| extracellular glutamine-binding protein [Staphylococcus aureus subsp. aureus C427] gi|282325176|gb|EFB55486.1| polar amino acid ABC transporter [Staphylococcus aureus subsp. aureus WBG10049] gi|282327439|gb|EFB57734.1| polar amino acid ABC transporter [Staphylococcus aureus subsp. aureus WW2703/97] gi|282331548|gb|EFB61062.1| polar amino acid ABC transporter [Staphylococcus aureus subsp. aureus Btn1260] gi|282596051|gb|EFC01015.1| amino acid ABC transporter, permease/substrate-binding protein [Staphylococcus aureus subsp. aureus C160] gi|283790760|gb|EFC29577.1| amino acid ABC transporter, permease/substrate-binding protein [Staphylococcus aureus subsp. aureus A017934/97] gi|295127836|gb|EFG57473.1| extracellular glutamine-binding protein [Staphylococcus aureus subsp. aureus EMRSA16] gi|312437677|gb|ADQ76748.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Staphylococcus aureus subsp. aureus TCH60] gi|315195770|gb|EFU26157.1| putative extracellular glutamine-binding protein [Staphylococcus aureus subsp. aureus CGS00] Length = 485 Score = 79.7 bits (195), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 43/124 (34%), Positives = 78/124 (62%), Gaps = 4/124 (3%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IAL ++A+IAEI+R+G+ AV +GQMEAA +LGL +R+ + V++PQA+++I+P L ++ Sbjct: 360 IALVINSSAYIAEIIRAGINAVDKGQMEAARSLGLNYRQTMKSVIMPQAIKNILPALGNE 419 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN---- 386 ++ L+K SS+ +G +++ + + +L+ +Y L+ ++ MN Sbjct: 420 FVTLIKESSIVSTIGVGEIMFNAQVVQGISFDPFTPLLVAAALYFVLTFVLTRIMNMIEG 479 Query: 387 RLNA 390 RLNA Sbjct: 480 RLNA 483 Score = 44.3 bits (103), Expect = 0.034, Method: Compositional matrix adjust. Identities = 21/67 (31%), Positives = 37/67 (55%) Query: 83 SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142 S Y + L G T ++ G+ +I+G V +LS K+++WI +Y+E+ R P L Sbjct: 275 SKYGSFFLKGIKITILISLIGVALGSILGAFVALMKLSKIKIISWIASIYIEILRGTPML 334 Query: 143 VVIFFLY 149 V +F ++ Sbjct: 335 VQVFIVF 341 >gi|314934479|ref|ZP_07841838.1| amino acid ABC transporter, permease protein [Staphylococcus caprae C87] gi|313652409|gb|EFS16172.1| amino acid ABC transporter, permease protein [Staphylococcus caprae C87] Length = 239 Score = 79.7 bits (195), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 51/155 (32%), Positives = 94/155 (60%), Gaps = 10/155 (6%) Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248 I + +F+LG+ ++LF T L R K + + +Y+S +I G P +V + + + + Sbjct: 34 ITIVTFILGLAIALF-TALMRISTSKILRGIARVYVS--IIRGTPMIVQL---FIIFYGI 87 Query: 249 PVLGQF---NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305 P LG+ + T++P ++ I LS A+ +EI+R G+I++P+GQ EAA ++G+ Sbjct: 88 PELGRLITNDADNQWTLAPVVAAI-IGLSFNVGAYASEIIRGGIISIPKGQTEAAYSIGM 146 Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340 +R+ + ++LPQA+R IP L + +L L+K++SL Sbjct: 147 NYRQTVQRIILPQAIRVSIPALGNTFLGLIKDTSL 181 >gi|118476113|ref|YP_893264.1| amino acid ABC transporter permease [Bacillus thuringiensis str. Al Hakam] gi|118415338|gb|ABK83757.1| amino acid ABC transporter membrane protein, PAAT family [Bacillus thuringiensis str. Al Hakam] Length = 233 Score = 79.7 bits (195), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 48/126 (38%), Positives = 75/126 (59%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IAL+ + A+I EI R + ++ RGQ+EAA +LG+ + A R ++LPQA R +PPL +Q Sbjct: 92 IALAIHNGAYITEIFRGSIQSIDRGQLEAARSLGMPYPLAMRRIVLPQAFRQSLPPLGNQ 151 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++ LK+SSL VG ++L G +I Q +E +I YL L ++ F+N L Sbjct: 152 FIIGLKDSSLVAYVGLSELWGSGLSIAASNFQQLETYMIVGLYYLVLVLLFTYFVNLLEK 211 Query: 391 KIALKE 396 ++ KE Sbjct: 212 RLQRKE 217 >gi|325978020|ref|YP_004287736.1| inner membrane amino-acid ABC transporter permease yecS [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] gi|325177948|emb|CBZ47992.1| Inner membrane amino-acid ABC transporter permease protein yecS [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] Length = 517 Score = 79.7 bits (195), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 61/171 (35%), Positives = 93/171 (54%), Gaps = 14/171 (8%) Query: 191 VFSFVLGIVLS--LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248 V S +L +VL + A R+S + L LYI ++ GLP LV+++L + Sbjct: 25 VVSMILALVLGGVVTAARMSDNL---LISGLTKLYIE--VVRGLPMLVILSL---FFYGL 76 Query: 249 PVLGQFNFIGGSTVSPEF---MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305 P LG FN GS + +S I L+ + F+AEI RSG+ AV GQ E A ++G Sbjct: 77 PELG-FNVPDGSLFGVDLDRLISALIGLTVGESVFVAEIYRSGIQAVDSGQFEGARSIGF 135 Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356 + R V++PQA ++I+P L +++ N +K+SS A +G ADL+ TI Sbjct: 136 NKFQTYRYVIIPQAFKNILPTLGNEFANNIKSSSQASVIGVADLMFTASTI 186 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 31/90 (34%), Positives = 53/90 (58%), Gaps = 4/90 (4%) Query: 84 SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143 +Y + IL G + T +L+ MI A ++G +V A R+S N L++ + ++Y+EV R +P LV Sbjct: 8 NYGSFILDGALMTVFLSVVSMILALVLGGVVTAARMSDNLLISGLTKLYIEVVRGLPMLV 67 Query: 144 VI-FFLYKSVLSVLPIPDHSIVLPFGMFLN 172 ++ F Y +PD S+ FG+ L+ Sbjct: 68 ILSLFFYGLPELGFNVPDGSL---FGVDLD 94 >gi|76574839|gb|ABA47313.1| ABC-type amino acid transport system, permease component [Pseudomonas cichorii] Length = 246 Score = 79.7 bits (195), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 44/111 (39%), Positives = 69/111 (62%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 EF++ + L+ Y++AFIAE R+G+ +V Q A ALGL + R V+LPQA+R+ + Sbjct: 112 EFIAGFWGLTLYSSAFIAEEFRAGVASVRPQQRTAGQALGLRPAQVWRYVVLPQAVRTAL 171 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375 PL QY+N+LKNSSL +A+G A+L + +T +A + I +Y+ Sbjct: 172 GPLLGQYMNVLKNSSLTMAIGLAELSYASRQVETETFKAFQAFGIATLLYI 222 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 27/66 (40%), Positives = 41/66 (62%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151 GF+ T L+ + AT +G LV R+S+++L +W R Y+ +FRN P LV +FF Y Sbjct: 21 GFLLTLRLSILVCLIATALGFLVCLARISSSRLWSWPARGYLSLFRNTPLLVQLFFWYFG 80 Query: 152 VLSVLP 157 V ++LP Sbjct: 81 VSALLP 86 >gi|86360226|ref|YP_472115.1| amino acid ABC transporter permease [Rhizobium etli CFN 42] gi|86284328|gb|ABC93388.1| probable amino acid ABC transporter, permease protein [Rhizobium etli CFN 42] Length = 251 Score = 79.7 bits (195), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 50/157 (31%), Positives = 90/157 (57%), Gaps = 11/157 (7%) Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290 G+P L+LI Y F P+L G+ V P F+++ L Y +AF++E+VR+G++ Sbjct: 74 GVPLLMLILWSY---FLVPLLT------GADV-PSFVTMLTTLVVYQSAFLSEVVRAGIV 123 Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 A+ GQM+A+ ALG ++ A R ++LPQA+ ++IP + S +++ +K+++L + DL Sbjct: 124 ALGPGQMDASRALGHSYVGAMRYIILPQALYNMIPSILSTFVSTIKDTTLGYVINVPDLT 183 Query: 351 SVGGTIINQ-TGQAIEIILIWMFIYLSLSIMIALFMN 386 + NQ Q ++ LI +Y ++ + F N Sbjct: 184 FAASQVNNQLLTQPFQVFLILAIVYFAICWTLTYFAN 220 >gi|299822330|ref|ZP_07054216.1| glutamate ABC superfamily ATP binding cassette transporter, membrane protein [Listeria grayi DSM 20601] gi|299815859|gb|EFI83097.1| glutamate ABC superfamily ATP binding cassette transporter, membrane protein [Listeria grayi DSM 20601] Length = 496 Score = 79.7 bits (195), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 56/176 (31%), Positives = 97/176 (55%), Gaps = 23/176 (13%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 + PLL + F+ FG+P AL +++ P F++ +ALS Sbjct: 341 RGTPLLVQAFFIYFGIPQ----ALDFRM-------------------PAFLAALLALSLN 377 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 A++ EIVR G+ +V GQMEAA +LGL +RK+ ++LPQA+R++IP +Q++ LK Sbjct: 378 AGAYMVEIVRGGIQSVDSGQMEAARSLGLPYRKSMIKIVLPQAIRTMIPSFINQFVITLK 437 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 ++S+ +G +L G II +T Q+ +I LI +YL + ++ +R+ ++ Sbjct: 438 DTSIMSVIGLVELTQSGKIIIARTFQSFDIWLIVALMYLIVITILTKVSDRVERRL 493 Score = 44.7 bits (104), Expect = 0.029, Method: Compositional matrix adjust. Identities = 30/88 (34%), Positives = 45/88 (51%), Gaps = 8/88 (9%) Query: 62 GFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSA 121 G S+++GF + S A+L G T L ++ A IIG + G ++S Sbjct: 274 GEASQKSGF--------FASLGESWPALLAGLWYTIRLTVLSLLIALIIGVVFGFMKVSQ 325 Query: 122 NKLVAWICRVYVEVFRNIPPLVVIFFLY 149 N++V I VYV++FR P LV FF+Y Sbjct: 326 NRIVRGIATVYVDIFRGTPLLVQAFFIY 353 >gi|54025809|ref|YP_120051.1| putative glutamate transporter permease [Nocardia farcinica IFM 10152] gi|54017317|dbj|BAD58687.1| putative glutamate transporter permease protein [Nocardia farcinica IFM 10152] Length = 299 Score = 79.7 bits (195), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 55/202 (27%), Positives = 105/202 (51%), Gaps = 15/202 (7%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 VF+ V+G+V + RLS H + + + +P L+L+ + L+ + + Sbjct: 82 VFAMVIGMVFGIL--RLSDHRWVRIVAGAIVEFARA-----IPVLILMIFLFALYSEYDL 134 Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 + + V+ AL+ Y + IAEIVR+G+ ++PRGQ EAA+ALGL + Sbjct: 135 FKSDDLALAAVVT--------ALTVYNGSVIAEIVRAGIRSLPRGQTEAAMALGLRKNQL 186 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370 RL+LLPQA+ +++P L SQ + LK+++L + + ++V G + I +++ Sbjct: 187 MRLILLPQAITAMLPALISQMVVALKDTALGYQITYVEIVRSGQQLGASESNTIPALIVV 246 Query: 371 MFIYLSLSIMIALFMNRLNAKI 392 + ++L+ + + RL ++ Sbjct: 247 AVVMIALNSTLTVVATRLERRL 268 Score = 38.1 bits (87), Expect = 2.2, Method: Compositional matrix adjust. Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 1/85 (1%) Query: 65 SERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKL 124 E+ FE D+ P+ + T +L G T A ++ A +IG + G RLS ++ Sbjct: 43 EEKGQFEADK-WKPFLEGEVWETYLLPGLRGTIVAALLSIVFAMVIGMVFGILRLSDHRW 101 Query: 125 VAWICRVYVEVFRNIPPLVVIFFLY 149 V + VE R IP L+++ FL+ Sbjct: 102 VRIVAGAIVEFARAIPVLILMIFLF 126 >gi|311280312|ref|YP_003942543.1| polar amino acid ABC transporter, inner membrane subunit [Enterobacter cloacae SCF1] gi|308749507|gb|ADO49259.1| polar amino acid ABC transporter, inner membrane subunit [Enterobacter cloacae SCF1] Length = 219 Score = 79.7 bits (195), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 42/129 (32%), Positives = 80/129 (62%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + + + + A+IAEI R ++++ +G EA +ALGL+ R+ R V+LP A+R ++P Sbjct: 90 FSAAVVTIMINSGAYIAEITRGAVLSIHKGFSEAGLALGLSRRETIRHVILPLALRRMLP 149 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PL +Q++ +K++SL + +G A+L G II +A+EI IYL ++++++ + Sbjct: 150 PLGNQWIISIKDTSLFIVIGVAELTRQGQEIIAGNFRALEIWSAVAVIYLLITLVLSFVL 209 Query: 386 NRLNAKIAL 394 RL ++ + Sbjct: 210 RRLERRMKI 218 Score = 36.2 bits (82), Expect = 8.5, Method: Compositional matrix adjust. Identities = 21/69 (30%), Positives = 35/69 (50%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G T W++ G++ IIG + G R + I V++EV R P +V + F+ Sbjct: 15 LLEGAKMTLWISVLGLVGGLIIGLVAGFARTYGGWIANHIALVFIEVIRGTPIVVQVMFI 74 Query: 149 YKSVLSVLP 157 Y ++ LP Sbjct: 75 YFALPMALP 83 >gi|225386718|ref|ZP_03756482.1| hypothetical protein CLOSTASPAR_00466 [Clostridium asparagiforme DSM 15981] gi|225047196|gb|EEG57442.1| hypothetical protein CLOSTASPAR_00466 [Clostridium asparagiforme DSM 15981] Length = 235 Score = 79.7 bits (195), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 44/135 (32%), Positives = 74/135 (54%), Gaps = 2/135 (1%) Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316 IGG P+FM + + Y A+I+E++R+G+ AVP+GQ EAA + G T+ + R ++L Sbjct: 89 IGGRV--PKFMLGVLGVGIYHGAYISEVIRTGIEAVPKGQFEAAYSQGFTYLQTMRYIIL 146 Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376 PQ ++ I+P L +Q LNL+KN+S+ V DL+ + + G + +Y Sbjct: 147 PQTIKLIMPSLANQALNLVKNTSVLAMVAGLDLMYFADSWGSDRGYFAQAYFSCALLYFV 206 Query: 377 LSIMIALFMNRLNAK 391 + +A L A+ Sbjct: 207 ICFPLARLARYLEAR 221 >gi|209885183|ref|YP_002289040.1| general L-amino acid transport system permease protein AapM [Oligotropha carboxidovorans OM5] gi|209873379|gb|ACI93175.1| general L-amino acid transport system permease protein AapM [Oligotropha carboxidovorans OM5] Length = 454 Score = 79.7 bits (195), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 37/96 (38%), Positives = 63/96 (65%) Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315 F+ G + + + ++ + A+ AE++R GL+A+PRGQ EAA ALGL++ K T L++ Sbjct: 308 FLPGDFTIDALVRVLVGIALFAGAYNAEVIRGGLLAIPRGQREAANALGLSYWKTTGLIV 367 Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 LPQA+R +IP L + ++ L K+++L + V DL+ Sbjct: 368 LPQALRHVIPSLVNSFIALFKDTTLVLIVALFDLLG 403 >gi|257869445|ref|ZP_05649098.1| amino acid ABC transporter [Enterococcus gallinarum EG2] gi|257803609|gb|EEV32431.1| amino acid ABC transporter [Enterococcus gallinarum EG2] Length = 218 Score = 79.7 bits (195), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 52/162 (32%), Positives = 91/162 (56%), Gaps = 14/162 (8%) Query: 232 LPTLVLIALKYQLHFDKPVLG-QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290 LP L++I Y F P +G +FN F S +AL+ + +A ++EI R+GL Sbjct: 65 LPLLLIIFFTY---FALPQIGIRFNI---------FWSAVVALTIFESAMLSEIFRAGLN 112 Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 AVP+GQMEA ++ GL++ + R +++PQA ++++P + SQ ++L+K++SLAV + +L Sbjct: 113 AVPKGQMEAGLSTGLSYVQVLRSIVMPQAFKAMLPAIVSQLISLIKDTSLAVIISLPELT 172 Query: 351 SVGGTIINQ-TGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 I Q T + + L +Y + ++L L A+ Sbjct: 173 HHARIIYGQNTNYVLPMFLAMTVLYFIVCYALSLLSRFLEAR 214 >gi|167771386|ref|ZP_02443439.1| hypothetical protein ANACOL_02752 [Anaerotruncus colihominis DSM 17241] gi|167666026|gb|EDS10156.1| hypothetical protein ANACOL_02752 [Anaerotruncus colihominis DSM 17241] Length = 221 Score = 79.7 bits (195), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 58/207 (28%), Positives = 108/207 (52%), Gaps = 19/207 (9%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 V ++G VL+L R+SR + + + LYI+ +I G+P + + + Y + F Sbjct: 33 VIGTLIGAVLALM--RISRS---RLLRGISTLYIT--VIRGIPMVTQLMIFYFIFF---- 81 Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 T P+ + I+ + A+ AEI RSG+ VP GQ+EA +LGL+ + Sbjct: 82 --------APTNVPKLVVAIISFGVNSGAYCAEIFRSGIQGVPVGQVEAGRSLGLSGAQT 133 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370 +L++LPQA ++++P T++++ L+K +++A + DL I N T A +L Sbjct: 134 MKLIILPQAFKAVLPTYTNEFVVLIKETAVASYIALVDLTKATDQIRNATFNAWVPLLTA 193 Query: 371 MFIYLSLSIMIALFMNRLNAKIALKEK 397 IYL +++ ++ RL ++A ++ Sbjct: 194 AVIYLCMTLGLSALFARLERRMARSDR 220 >gi|254439200|ref|ZP_05052694.1| ABC transporter, permease protein, putative [Octadecabacter antarcticus 307] gi|198254646|gb|EDY78960.1| ABC transporter, permease protein, putative [Octadecabacter antarcticus 307] Length = 247 Score = 79.7 bits (195), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 63/209 (30%), Positives = 108/209 (51%), Gaps = 33/209 (15%) Query: 193 SFVLGIVLSL---FATRLSRHFHE---KTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246 S VLG++++L R R F+ + +++P+L + ++ +GLPT Sbjct: 60 SVVLGLLIALPGLSEKRGWRMFNRTYVEIVRSVPILVLILWVYYGLPT------------ 107 Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306 + G T+S F S +AL+ +AF AEI R+G+ ++ RGQ EAA ++ L Sbjct: 108 ----------VSGITLSV-FWSGVLALALSDSAFQAEIFRAGIQSIGRGQYEAAQSVSLN 156 Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 +R R ++LPQA+R I+P L +Q + +LK SSL +G +L ++ + +EI Sbjct: 157 YRDTMRYIILPQAIRRILPALGNQLVYMLKMSSLVSVIGLQELTRRANELVVSEYRPLEI 216 Query: 367 ----ILIWMFIYLSLSIMIALFMNRLNAK 391 +L ++F+ L +S + F RL A Sbjct: 217 YSVLVLQYLFLILIVSAGVRWFERRLKAS 245 >gi|90413735|ref|ZP_01221723.1| Putative amino acid ABC transporter, permease protein [Photobacterium profundum 3TCK] gi|90325204|gb|EAS41701.1| Putative amino acid ABC transporter, permease protein [Photobacterium profundum 3TCK] Length = 223 Score = 79.7 bits (195), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 65/202 (32%), Positives = 105/202 (51%), Gaps = 17/202 (8%) Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV-LIALKYQLHFDKPV 250 F+ ++ I L+L R + L LYIS F G P LV L L Y L P+ Sbjct: 32 FALIIAITLALV-----RVYKLPVLNQLSQLYISFFR--GTPLLVQLFLLYYGLPQVFPI 84 Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 FIG S I LS + AA++AE +R+ +I V R Q EA++A+G+T +A Sbjct: 85 -----FIGLDAFSASV----IGLSLHFAAYMAESIRAAIIGVDRSQREASLAIGMTEMQA 135 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370 R ++LPQA R +P L + +++++K++SLA +G A++++ + + + E L Sbjct: 136 MRRIILPQATRIALPSLMNYFIDMIKSTSLAFTLGVAEIMAKAQMEASSSFKFFEAFLAV 195 Query: 371 MFIYLSLSIMIALFMNRLNAKI 392 FIY L +++ N AK+ Sbjct: 196 AFIYWGLVLVLTQVQNWAEAKL 217 >gi|152964896|ref|YP_001360680.1| polar amino acid ABC transporter, inner membrane subunit [Kineococcus radiotolerans SRS30216] gi|151359413|gb|ABS02416.1| polar amino acid ABC transporter, inner membrane subunit [Kineococcus radiotolerans SRS30216] Length = 329 Score = 79.7 bits (195), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 63/189 (33%), Positives = 95/189 (50%), Gaps = 13/189 (6%) Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF----LIFGLPTLVLIALKY-QLHFD 247 VLG VL+L R KA+ Y+S F LI L +A+ Y ++ F Sbjct: 98 GLVLGTVLALM-----RMSGNPLLKAVSFTYVSVFRSVPLILQLLFWYNMAILYDRIGFG 152 Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307 P QF I + + ++ L + AA+ AEIVRSG +AV GQ EAA ALG+ Sbjct: 153 VPFGPQFWTISTQDLIGPVTAAFLGLGLHQAAYFAEIVRSGFLAVDPGQREAAAALGIPR 212 Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367 + R + LPQA+R I+P ++ + LLK +S+ + +L + N+TGQ I ++ Sbjct: 213 LRQFRRIQLPQALRVIVPTTGNEVIGLLKGTSVVYVMALPELFYQVQVVYNRTGQVIPLL 272 Query: 368 L---IWMFI 373 L +W F+ Sbjct: 273 LVAAVWYFV 281 >gi|317401660|gb|EFV82285.1| glutamate/aspartate transport system permease 2 [Achromobacter xylosoxidans C54] Length = 250 Score = 79.7 bits (195), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 62/211 (29%), Positives = 103/211 (48%), Gaps = 18/211 (8%) Query: 190 FVFSFVLGIVLSLFATRLSR------HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243 +VFS +LG L + T SR + + + +PLL F LP L+ A Sbjct: 40 WVFSLLLGSCLGVMRTASSRLANAIGATYVEIFRNVPLLVQMFLWYFVLPELLPHAWGLA 99 Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 + GQF + + L Y +A +AE +R+G+ ++PRGQ +A AL Sbjct: 100 MKQMPQPWGQF------------LPAVLCLGFYGSARVAEQLRAGIQSLPRGQFQAGTAL 147 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363 GLT + R ++LP+A R ++PPLTS+++ +K SS+A+ +G +L ++ + Sbjct: 148 GLTETQVYRHIILPEAYRIVLPPLTSEFMGTIKYSSVALTIGLLELTGQTRSMAEFSFHI 207 Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394 E IYL L+ ++ L M L +A+ Sbjct: 208 FEAFTAATVIYLILNGIVVLGMRLLERHVAV 238 Score = 44.7 bits (104), Expect = 0.028, Method: Compositional matrix adjust. Identities = 28/92 (30%), Positives = 50/92 (54%), Gaps = 4/92 (4%) Query: 84 SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143 ++ IL+G T LA + + + ++G+ +G R ++++L I YVE+FRN+P LV Sbjct: 20 TFLETILIGVGWTLALALTAWVFSLLLGSCLGVMRTASSRLANAIGATYVEIFRNVPLLV 79 Query: 144 VIFFLYKSVLSVLP----IPDHSIVLPFGMFL 171 +F Y + +LP + + P+G FL Sbjct: 80 QMFLWYFVLPELLPHAWGLAMKQMPQPWGQFL 111 >gi|242240516|ref|YP_002988697.1| polar amino acid ABC transporter inner membrane subunit [Dickeya dadantii Ech703] gi|242132573|gb|ACS86875.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya dadantii Ech703] Length = 214 Score = 79.7 bits (195), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 53/148 (35%), Positives = 84/148 (56%), Gaps = 15/148 (10%) Query: 216 GKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG-QFNFIGGSTVSPEFMSLYIALS 274 G+ L LLY T L G P VLI L + ++F G + N F + + LS Sbjct: 48 GRQLALLY--TELFRGTP--VLITLMF-IYFGVAYFGYEINL---------FAAGILGLS 93 Query: 275 CYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNL 334 Y A+I+E+ R+G+ AVP+GQ E + LGL+ + V+LPQ ++PPL QYL+L Sbjct: 94 IYQGAYISEVFRAGIDAVPKGQWEVSWILGLSKWQTFMHVVLPQTRGIVLPPLVGQYLSL 153 Query: 335 LKNSSLAVAVGFADLVSVGGTIINQTGQ 362 +K++S+ +G ++L+ G I+++ GQ Sbjct: 154 IKDTSIVSMIGMSELMHQGQAIVDRIGQ 181 >gi|227328458|ref|ZP_03832482.1| ABC transporter permease protein [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 314 Score = 79.7 bits (195), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 54/183 (29%), Positives = 98/183 (53%), Gaps = 10/183 (5%) Query: 226 TFLIFGLPTLVLIALKYQL-------HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTA 278 T+ G+PTLV + L Y + P +G+ + G+T+ F + +AL + + Sbjct: 102 TWFFRGVPTLVQLFLWYNIAALYPTISLSLPFVGELFSVPGNTLISPFNAAVLALVMHQS 161 Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338 A+ AEIVR+G+ +V GQ+EAA ALG + +LPQAMR+I+PP ++ + LK + Sbjct: 162 AYAAEIVRAGIQSVNPGQLEAARALGYRKPQIFFYTVLPQAMRAILPPAGNEVIGQLKTT 221 Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL---FMNRLNAKIALK 395 ++ + D++ I +T + I ++L+ YL L+ ++++ ++ R + LK Sbjct: 222 AVVSVISLQDVLYSAQIIYQRTYEVIPLLLVATIWYLLLTSVLSVGQYYVERYFGRSTLK 281 Query: 396 EKK 398 K Sbjct: 282 RNK 284 >gi|297590597|ref|ZP_06949235.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Staphylococcus aureus subsp. aureus MN8] gi|297575483|gb|EFH94199.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Staphylococcus aureus subsp. aureus MN8] Length = 485 Score = 79.7 bits (195), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 43/124 (34%), Positives = 78/124 (62%), Gaps = 4/124 (3%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IAL ++A+IAEI+R+G+ AV +GQMEAA +LGL +R+ + V++PQA+++I+P L ++ Sbjct: 360 IALVINSSAYIAEIIRAGINAVDKGQMEAARSLGLNYRQTMKSVIMPQAIKNILPALGNE 419 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN---- 386 ++ L+K SS+ +G +++ + + +L+ +Y L+ ++ MN Sbjct: 420 FVTLIKESSIVSTIGVGEIMFNAQVVQGISFDPFTPLLVAAALYFVLTFVLTRIMNMIEG 479 Query: 387 RLNA 390 RLNA Sbjct: 480 RLNA 483 Score = 44.3 bits (103), Expect = 0.034, Method: Compositional matrix adjust. Identities = 21/67 (31%), Positives = 37/67 (55%) Query: 83 SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142 S Y + L G T ++ G+ +I+G V +LS K+++WI +Y+E+ R P L Sbjct: 275 SKYGSFFLKGIKITILISLIGVALGSILGAFVALMKLSKIKIISWIASIYIEILRGTPML 334 Query: 143 VVIFFLY 149 V +F ++ Sbjct: 335 VQVFIVF 341 >gi|205375469|ref|ZP_03228257.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus coahuilensis m4-4] Length = 219 Score = 79.7 bits (195), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 55/169 (32%), Positives = 95/169 (56%), Gaps = 17/169 (10%) Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251 F F+LGI+L+ F + K + Y S F G P ++ IAL Y F P L Sbjct: 32 FGFLLGIILAFFKISTIKPL-----KWFGIAYTSIFR--GTPLILQIALIY---FATPQL 81 Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311 +++ + P ++ IA + +AA+I+E +R G++AV +GQ EAA++LG+ +RK Sbjct: 82 LRYD------IDP-LLAGVIAFALNSAAYISETIRGGILAVDKGQREAAMSLGVPYRKMM 134 Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 +++PQA++ I+P L ++ + LLK S+L +G DL+ + ++T Sbjct: 135 WHIVMPQAVKKILPALANESIALLKESALVSTIGAMDLLRRATIVSSKT 183 >gi|196040103|ref|ZP_03107405.1| putative amino acid ABC transporter, permease protein [Bacillus cereus NVH0597-99] gi|300118987|ref|ZP_07056698.1| glutamine ABC transporter, permease/substrate-binding protein [Bacillus cereus SJ1] gi|196028958|gb|EDX67563.1| putative amino acid ABC transporter, permease protein [Bacillus cereus NVH0597-99] gi|298723603|gb|EFI64334.1| glutamine ABC transporter, permease/substrate-binding protein [Bacillus cereus SJ1] Length = 230 Score = 79.7 bits (195), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 74/223 (33%), Positives = 116/223 (52%), Gaps = 19/223 (8%) Query: 177 SFPTLTMDT--NAKIFVFSFVLGIVLSL-FATRLSRHFHEKTGKALPLLYISTFLIFGLP 233 ++PTL T ++ + S VLG ++ L FA R + K ++ +YI+ +I G P Sbjct: 8 TYPTLLKATIVTLQLTLTSLVLGSLIGLLFA--FFRISNNKVLNSIAHVYIA--IIRGTP 63 Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293 +V IA+ Y F +P F + IAL+ + A+I EI R + +V Sbjct: 64 LIVQIAILY-----------FGITSVVVFTP-FWAGAIALAIHNGAYITEIFRGSIQSVD 111 Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353 RGQMEAA +LG+ + A R ++LPQA R IPPL +Q++ LK+SSL VG ++L G Sbjct: 112 RGQMEAARSLGMPYSLAMRRIVLPQAFRQSIPPLGNQFIIGLKDSSLVAYVGLSELWGSG 171 Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 +I Q ++ +I YL L ++ +N L ++ KE Sbjct: 172 LSIAAGNFQQLDTYIIVGLYYLVLVLLFTYLVNLLEKRLQRKE 214 >gi|312830230|emb|CBX35072.1| amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Staphylococcus aureus subsp. aureus ECT-R 2] Length = 485 Score = 79.7 bits (195), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 43/124 (34%), Positives = 78/124 (62%), Gaps = 4/124 (3%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IAL ++A+IAEI+R+G+ AV +GQMEAA +LGL +R+ + V++PQA+++I+P L ++ Sbjct: 360 IALVINSSAYIAEIIRAGINAVDKGQMEAARSLGLNYRQTMKSVIMPQAIKNILPALGNE 419 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN---- 386 ++ L+K SS+ +G +++ + + +L+ +Y L+ ++ MN Sbjct: 420 FVTLIKESSIVSTIGVGEIMFNAQVVQGISFDPFTPLLVAAALYFVLTFVLTRIMNMIEG 479 Query: 387 RLNA 390 RLNA Sbjct: 480 RLNA 483 Score = 44.3 bits (103), Expect = 0.038, Method: Compositional matrix adjust. Identities = 21/67 (31%), Positives = 37/67 (55%) Query: 83 SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142 S Y + L G T ++ G+ +I+G V +LS K+++WI +Y+E+ R P L Sbjct: 275 SKYGSFFLKGIKITILISLIGVALGSILGVFVALMKLSKIKIISWIASIYIEILRGTPML 334 Query: 143 VVIFFLY 149 V +F ++ Sbjct: 335 VQVFIVF 341 >gi|261210915|ref|ZP_05925205.1| amino acid ABC transporter permease protein [Vibrio sp. RC341] gi|260839890|gb|EEX66490.1| amino acid ABC transporter permease protein [Vibrio sp. RC341] Length = 365 Score = 79.7 bits (195), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 41/112 (36%), Positives = 71/112 (63%), Gaps = 8/112 (7%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I + ++AA++AE++R GL A+P+GQ EAA ALGL++ K L++LPQA++ IP + + Sbjct: 235 IGVVMFSAAYMAEVIRGGLQAIPKGQYEAADALGLSYWKKMGLIILPQALKITIPSIVNT 294 Query: 331 YLNLLKNSSLAVAVGFADLVSVG---GTIINQTGQAIE-----IILIWMFIY 374 ++ L K++SL + +G D++ +G T N G A E ++ W+F + Sbjct: 295 FIGLFKDTSLVLIIGMFDVLGIGQSANTDPNWLGFATESYVFVALVFWVFCF 346 >gi|323339490|ref|ZP_08079769.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus ruminis ATCC 25644] gi|323093104|gb|EFZ35697.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus ruminis ATCC 25644] Length = 215 Score = 79.7 bits (195), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 58/208 (27%), Positives = 100/208 (48%), Gaps = 33/208 (15%) Query: 191 VFSFVLGIVLSLFATRLSR--------HFHEKTGKALPLLYISTFLIFGLPTLVLIALKY 242 VFS LG++ +L R S+ F+ + PLL F+ +GLP L Sbjct: 27 VFSLPLGLICAL--GRCSKFKILNAVLRFYIWLMRGTPLLLQLIFVFYGLPLL------- 77 Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302 G V P + + +A A+ AEI R GL ++ RGQ E+A Sbjct: 78 ---------------GTGIVLPRYAAALVAFVLNYTAYFAEIFRGGLQSIDRGQYESARV 122 Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362 L LT+ + R ++ PQ M+ ++P + ++ +NL+K+SSL +G DL+ G ++ Sbjct: 123 LRLTYWQTIRKIIAPQVMKIVVPSIGNEVINLIKDSSLVYVIGLGDLLRAGNVASSRDVS 182 Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNA 390 I ++L+ + IYL+L+ + + ++ A Sbjct: 183 LIPLVLVGI-IYLALTAVFTWMLQKVEA 209 >gi|15641372|ref|NP_231004.1| amino acid ABC transporter, permease protein [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121587995|ref|ZP_01677747.1| amino acid ABC transporter, permease protein [Vibrio cholerae 2740-80] gi|121728528|ref|ZP_01681551.1| amino acid ABC transporter, permease protein [Vibrio cholerae V52] gi|147674160|ref|YP_001216919.1| amino acid ABC transporter, permease protein [Vibrio cholerae O395] gi|153212686|ref|ZP_01948343.1| amino acid ABC transporter, permease protein [Vibrio cholerae 1587] gi|153819357|ref|ZP_01972024.1| amino acid ABC transporter, permease protein [Vibrio cholerae NCTC 8457] gi|153825276|ref|ZP_01977943.1| amino acid ABC transporter, permease protein [Vibrio cholerae MZO-2] gi|153828797|ref|ZP_01981464.1| amino acid ABC transporter, permease protein [Vibrio cholerae 623-39] gi|183179358|ref|ZP_02957569.1| amino acid ABC transporter, permease protein [Vibrio cholerae MZO-3] gi|227081531|ref|YP_002810082.1| amino acid ABC transporter, permease protein [Vibrio cholerae M66-2] gi|229505059|ref|ZP_04394569.1| amino acid ABC transporter permease protein [Vibrio cholerae BX 330286] gi|229511271|ref|ZP_04400750.1| amino acid ABC transporter permease protein [Vibrio cholerae B33] gi|229515732|ref|ZP_04405191.1| amino acid ABC transporter permease protein [Vibrio cholerae TMA 21] gi|229518389|ref|ZP_04407833.1| amino acid ABC transporter permease protein [Vibrio cholerae RC9] gi|229523538|ref|ZP_04412943.1| amino acid ABC transporter permease protein [Vibrio cholerae bv. albensis VL426] gi|229529564|ref|ZP_04418954.1| amino acid ABC transporter permease protein [Vibrio cholerae 12129(1)] gi|229608063|ref|YP_002878711.1| amino acid ABC transporter permease protein [Vibrio cholerae MJ-1236] gi|254848482|ref|ZP_05237832.1| amino acid ABC transporter [Vibrio cholerae MO10] gi|255745747|ref|ZP_05419695.1| amino acid ABC transporter permease protein [Vibrio cholera CIRS 101] gi|262158975|ref|ZP_06030087.1| amino acid ABC transporter permease protein [Vibrio cholerae INDRE 91/1] gi|262169334|ref|ZP_06037026.1| amino acid ABC transporter permease protein [Vibrio cholerae RC27] gi|298498556|ref|ZP_07008363.1| amino acid ABC transporter [Vibrio cholerae MAK 757] gi|9655853|gb|AAF94518.1| amino acid ABC transporter, permease protein [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121547736|gb|EAX57827.1| amino acid ABC transporter, permease protein [Vibrio cholerae 2740-80] gi|121629192|gb|EAX61632.1| amino acid ABC transporter, permease protein [Vibrio cholerae V52] gi|124116336|gb|EAY35156.1| amino acid ABC transporter, permease protein [Vibrio cholerae 1587] gi|126510102|gb|EAZ72696.1| amino acid ABC transporter, permease protein [Vibrio cholerae NCTC 8457] gi|146316043|gb|ABQ20582.1| amino acid ABC transporter, permease protein [Vibrio cholerae O395] gi|148875750|gb|EDL73885.1| amino acid ABC transporter, permease protein [Vibrio cholerae 623-39] gi|149741104|gb|EDM55163.1| amino acid ABC transporter, permease protein [Vibrio cholerae MZO-2] gi|183012769|gb|EDT88069.1| amino acid ABC transporter, permease protein [Vibrio cholerae MZO-3] gi|227009419|gb|ACP05631.1| amino acid ABC transporter, permease protein [Vibrio cholerae M66-2] gi|227013277|gb|ACP09487.1| amino acid ABC transporter, permease protein [Vibrio cholerae O395] gi|229333338|gb|EEN98824.1| amino acid ABC transporter permease protein [Vibrio cholerae 12129(1)] gi|229337119|gb|EEO02136.1| amino acid ABC transporter permease protein [Vibrio cholerae bv. albensis VL426] gi|229345104|gb|EEO10078.1| amino acid ABC transporter permease protein [Vibrio cholerae RC9] gi|229347501|gb|EEO12461.1| amino acid ABC transporter permease protein [Vibrio cholerae TMA 21] gi|229351236|gb|EEO16177.1| amino acid ABC transporter permease protein [Vibrio cholerae B33] gi|229357282|gb|EEO22199.1| amino acid ABC transporter permease protein [Vibrio cholerae BX 330286] gi|229370718|gb|ACQ61141.1| amino acid ABC transporter permease protein [Vibrio cholerae MJ-1236] gi|254844187|gb|EET22601.1| amino acid ABC transporter [Vibrio cholerae MO10] gi|255736822|gb|EET92219.1| amino acid ABC transporter permease protein [Vibrio cholera CIRS 101] gi|262022147|gb|EEY40856.1| amino acid ABC transporter permease protein [Vibrio cholerae RC27] gi|262029160|gb|EEY47812.1| amino acid ABC transporter permease protein [Vibrio cholerae INDRE 91/1] gi|297542889|gb|EFH78939.1| amino acid ABC transporter [Vibrio cholerae MAK 757] gi|327484030|gb|AEA78437.1| Amino acid ABC transporter, permease protein [Vibrio cholerae LMA3894-4] Length = 365 Score = 79.7 bits (195), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 41/112 (36%), Positives = 71/112 (63%), Gaps = 8/112 (7%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I + ++AA++AE++R GL A+P+GQ EAA ALGL++ K L++LPQA++ IP + + Sbjct: 235 IGVVMFSAAYMAEVIRGGLQAIPKGQYEAADALGLSYWKKMGLIILPQALKITIPSIVNT 294 Query: 331 YLNLLKNSSLAVAVGFADLVSVG---GTIINQTGQAIE-----IILIWMFIY 374 ++ L K++SL + +G D++ +G T N G A E ++ W+F + Sbjct: 295 FIGLFKDTSLVLIIGMFDVLGIGQSANTDPNWLGFATESYVFVALVFWIFCF 346 >gi|328950980|ref|YP_004368315.1| polar amino acid ABC transporter, inner membrane subunit [Marinithermus hydrothermalis DSM 14884] gi|328451304|gb|AEB12205.1| polar amino acid ABC transporter, inner membrane subunit [Marinithermus hydrothermalis DSM 14884] Length = 376 Score = 79.7 bits (195), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 58/185 (31%), Positives = 98/185 (52%), Gaps = 18/185 (9%) Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252 SF LG++L+L R + L LYI T + G+P + ++ L + + P+ Sbjct: 184 SFPLGLLLAL-----GRTSRLPAIRILATLYIET--VRGVPLVSVLFLAWIM---VPL-- 231 Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312 F+ + P+ + + + + AA++AE +R GL VP+GQ EAA ALGL + Sbjct: 232 ---FVPEAWRPPQLVRVIAGFTLFAAAYLAEYIRGGLQGVPKGQYEAAWALGLNGFQTAY 288 Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII---NQTGQAIEIILI 369 ++LPQA+RS+IP L Q + + K++SL VG DL+ + +++ N G E+ L Sbjct: 289 YIILPQAIRSVIPALIGQVIAIFKDTSLVAIVGLLDLLGIAQSVLANPNYLGLEREVYLF 348 Query: 370 WMFIY 374 + +Y Sbjct: 349 LLVVY 353 >gi|312139385|ref|YP_004006721.1| glutamate abc transporter integral membrane subunit gluc [Rhodococcus equi 103S] gi|325672734|ref|ZP_08152430.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Rhodococcus equi ATCC 33707] gi|311888724|emb|CBH48036.1| putative glutamate ABC transporter integral membrane subunit GluC [Rhodococcus equi 103S] gi|325556611|gb|EGD26277.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Rhodococcus equi ATCC 33707] Length = 227 Score = 79.7 bits (195), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 45/122 (36%), Positives = 75/122 (61%), Gaps = 1/122 (0%) Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335 YTAAF+ E +RSG+ VP GQ EAA +LGLT + R+++LPQA R++I PL S + L Sbjct: 106 YTAAFVCESLRSGINTVPIGQAEAARSLGLTFTQGIRMIVLPQAFRAVIAPLGSVLIALT 165 Query: 336 KNSSLAVAVGFADLVSVGGTII-NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394 KN+++A A+G A+ + T+I N+ + + I+ ++ L++ + L ++A+ Sbjct: 166 KNTTIASAIGVAEASLLMKTMIENEADKLFLVFGIFAIGFMILTLPVGFLFGYLGKRLAV 225 Query: 395 KE 396 K Sbjct: 226 KR 227 >gi|260550664|ref|ZP_05824873.1| glutamate/aspartate transporter [Acinetobacter sp. RUH2624] gi|260406375|gb|EEW99858.1| glutamate/aspartate transporter [Acinetobacter sp. RUH2624] Length = 225 Score = 79.7 bits (195), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 53/166 (31%), Positives = 90/166 (54%), Gaps = 8/166 (4%) Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290 G+P LI + + +F P + F F + P F S+ + + + AAF +EIVRSG+ Sbjct: 64 GIP---LIQVIFIFYFLLPKI--FEFQSDTYWGPLFSSV-VTFAIFEAAFFSEIVRSGIQ 117 Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 ++ +GQ+ A ALG T+ ++ R V+LPQA R+++P L +Q + L ++ SL + D + Sbjct: 118 SISKGQVNAGYALGFTYGQSMRYVVLPQAFRNMLPVLLTQTIILFQDVSLVYVISAPDFL 177 Query: 351 SVGGTIINQTGQAIE--IILIWMFIYLSLSIMIALFMNRLNAKIAL 394 T+ N G + LI +Y S +++ + RL KIA+ Sbjct: 178 GRADTLANTYGPETKATFYLIVAVVYFCSSFVLSQLVKRLQKKIAI 223 Score = 37.4 bits (85), Expect = 4.7, Method: Compositional matrix adjust. Identities = 21/62 (33%), Positives = 34/62 (54%) Query: 88 AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147 A+ GF+ T + M+ +IGT + RLS + + + + YV++FR IP + VIF Sbjct: 14 ALKEGFIFTLTVTVLAMMGGILIGTPLAMMRLSNSTIASNFAKFYVDLFRGIPLIQVIFI 73 Query: 148 LY 149 Y Sbjct: 74 FY 75 >gi|126641538|ref|YP_001084522.1| glutamate/aspartate transport protein [Acinetobacter baumannii ATCC 17978] Length = 196 Score = 79.7 bits (195), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 53/166 (31%), Positives = 90/166 (54%), Gaps = 8/166 (4%) Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290 G+P LI + + +F P + F F + P F S+ + + + AAF +EIVRSG+ Sbjct: 35 GIP---LIQVIFIFYFLLPKI--FEFQSDTYWGPLFSSV-VTFAIFEAAFFSEIVRSGIQ 88 Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 ++ +GQ+ A ALG T+ ++ R V+LPQA R+++P L +Q + L ++ SL + D + Sbjct: 89 SISKGQVNAGYALGFTYGQSMRYVVLPQAFRNMLPVLLTQTIILFQDVSLVYVISAPDFL 148 Query: 351 SVGGTIINQTGQAIE--IILIWMFIYLSLSIMIALFMNRLNAKIAL 394 T+ N G + LI +Y S +++ + RL KIA+ Sbjct: 149 GRADTLANTYGPETKATFYLIVAVVYFCSSFVLSQLVKRLQKKIAI 194 Score = 37.0 bits (84), Expect = 6.0, Method: Compositional matrix adjust. Identities = 19/46 (41%), Positives = 27/46 (58%) Query: 104 MIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 M+ +IGT + RLS N L + + YV++FR IP + VIF Y Sbjct: 1 MMGGILIGTPLAMMRLSNNALASNFAKFYVDLFRGIPLIQVIFIFY 46 >gi|257428635|ref|ZP_05605033.1| polar amino acid ABC transporter [Staphylococcus aureus subsp. aureus 65-1322] gi|257431272|ref|ZP_05607649.1| polar amino acid ABC transporter [Staphylococcus aureus subsp. aureus 68-397] gi|257433952|ref|ZP_05610310.1| polar amino acid ABC transporter [Staphylococcus aureus subsp. aureus E1410] gi|257436868|ref|ZP_05612912.1| polar amino acid ABC transporter [Staphylococcus aureus subsp. aureus M876] gi|282914654|ref|ZP_06322440.1| amino acid ABC transporter, permease/substrate-binding protein [Staphylococcus aureus subsp. aureus M899] gi|282924999|ref|ZP_06332665.1| extracellular glutamine-binding protein [Staphylococcus aureus subsp. aureus C101] gi|293503725|ref|ZP_06667572.1| extracellular glutamine-binding protein [Staphylococcus aureus subsp. aureus 58-424] gi|293510746|ref|ZP_06669451.1| extracellular glutamine-binding protein [Staphylococcus aureus subsp. aureus M809] gi|293537288|ref|ZP_06671968.1| amino acid ABC transporter, permease/substrate-binding protein [Staphylococcus aureus subsp. aureus M1015] gi|257275476|gb|EEV06963.1| polar amino acid ABC transporter [Staphylococcus aureus subsp. aureus 65-1322] gi|257278220|gb|EEV08868.1| polar amino acid ABC transporter [Staphylococcus aureus subsp. aureus 68-397] gi|257282045|gb|EEV12182.1| polar amino acid ABC transporter [Staphylococcus aureus subsp. aureus E1410] gi|257284219|gb|EEV14342.1| polar amino acid ABC transporter [Staphylococcus aureus subsp. aureus M876] gi|282313365|gb|EFB43761.1| extracellular glutamine-binding protein [Staphylococcus aureus subsp. aureus C101] gi|282321835|gb|EFB52160.1| amino acid ABC transporter, permease/substrate-binding protein [Staphylococcus aureus subsp. aureus M899] gi|290920133|gb|EFD97201.1| amino acid ABC transporter, permease/substrate-binding protein [Staphylococcus aureus subsp. aureus M1015] gi|291095391|gb|EFE25656.1| extracellular glutamine-binding protein [Staphylococcus aureus subsp. aureus 58-424] gi|291466637|gb|EFF09158.1| extracellular glutamine-binding protein [Staphylococcus aureus subsp. aureus M809] Length = 485 Score = 79.7 bits (195), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 43/124 (34%), Positives = 78/124 (62%), Gaps = 4/124 (3%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IAL ++A+IAEI+R+G+ AV +GQMEAA +LGL +R+ + V++PQA+++I+P L ++ Sbjct: 360 IALVINSSAYIAEIIRAGINAVDKGQMEAARSLGLNYRQTMKSVIMPQAIKNILPALGNE 419 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN---- 386 ++ L+K SS+ +G +++ + + +L+ +Y L+ ++ MN Sbjct: 420 FVTLIKESSIVSTIGVGEIMFNAQVVQGISFDPFTPLLVAAALYFVLTFVLTRIMNMIEG 479 Query: 387 RLNA 390 RLNA Sbjct: 480 RLNA 483 Score = 44.3 bits (103), Expect = 0.034, Method: Compositional matrix adjust. Identities = 21/67 (31%), Positives = 37/67 (55%) Query: 83 SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142 S Y + L G T ++ G+ +I+G V +LS K+++WI +Y+E+ R P L Sbjct: 275 SKYGSFFLKGIKITILISLIGVALGSILGAFVALMKLSKIKIISWIASIYIEILRGTPML 334 Query: 143 VVIFFLY 149 V +F ++ Sbjct: 335 VQVFIVF 341 >gi|269127495|ref|YP_003300865.1| polar amino acid ABC transporter inner membrane subunit [Thermomonospora curvata DSM 43183] gi|268312453|gb|ACY98827.1| polar amino acid ABC transporter, inner membrane subunit [Thermomonospora curvata DSM 43183] Length = 228 Score = 79.7 bits (195), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 46/127 (36%), Positives = 76/127 (59%), Gaps = 1/127 (0%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + LS YT+AF+ E +RSG+ VP GQ EAA ++GLT ++ RLV+LPQA R++I PL S Sbjct: 102 LGLSIYTSAFVCEALRSGINTVPIGQAEAARSIGLTFTQSLRLVILPQAFRAVIAPLGSV 161 Query: 331 YLNLLKNSSLAVAVGFA-DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 + ++KN+++ AV + D +V + + G +I I + Y+ L++ F L Sbjct: 162 MIAMIKNTTVVGAVAYGRDAAAVMKDMFDDLGASIPIFVGIAIGYMILTLPTGFFFGWLA 221 Query: 390 AKIALKE 396 ++A+ Sbjct: 222 KRMAVAR 228 >gi|16804386|ref|NP_465871.1| hypothetical protein lmo2348 [Listeria monocytogenes EGD-e] gi|47096046|ref|ZP_00233648.1| amino acid ABC transporter, permease protein [Listeria monocytogenes str. 1/2a F6854] gi|224499027|ref|ZP_03667376.1| hypothetical protein LmonF1_04718 [Listeria monocytogenes Finland 1988] gi|224503522|ref|ZP_03671829.1| hypothetical protein LmonFR_13617 [Listeria monocytogenes FSL R2-561] gi|254826827|ref|ZP_05231514.1| amino acid ABC transporter [Listeria monocytogenes FSL N3-165] gi|254831227|ref|ZP_05235882.1| hypothetical protein Lmon1_07712 [Listeria monocytogenes 10403S] gi|254901126|ref|ZP_05261050.1| hypothetical protein LmonJ_14968 [Listeria monocytogenes J0161] gi|254914024|ref|ZP_05264036.1| amino acid ABC transporter [Listeria monocytogenes J2818] gi|254938339|ref|ZP_05270036.1| amino acid ABC transporter [Listeria monocytogenes F6900] gi|255028990|ref|ZP_05300941.1| hypothetical protein LmonL_07146 [Listeria monocytogenes LO28] gi|284802789|ref|YP_003414654.1| hypothetical protein LM5578_2546 [Listeria monocytogenes 08-5578] gi|284995931|ref|YP_003417699.1| hypothetical protein LM5923_2496 [Listeria monocytogenes 08-5923] gi|16411836|emb|CAD00426.1| lmo2348 [Listeria monocytogenes EGD-e] gi|47015643|gb|EAL06574.1| amino acid ABC transporter, permease protein [Listeria monocytogenes str. 1/2a F6854] gi|258599205|gb|EEW12530.1| amino acid ABC transporter [Listeria monocytogenes FSL N3-165] gi|258610951|gb|EEW23559.1| amino acid ABC transporter [Listeria monocytogenes F6900] gi|284058351|gb|ADB69292.1| hypothetical protein LM5578_2546 [Listeria monocytogenes 08-5578] gi|284061398|gb|ADB72337.1| hypothetical protein LM5923_2496 [Listeria monocytogenes 08-5923] gi|293592042|gb|EFG00377.1| amino acid ABC transporter [Listeria monocytogenes J2818] Length = 238 Score = 79.7 bits (195), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 66/211 (31%), Positives = 108/211 (51%), Gaps = 24/211 (11%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 +F F+LG++LSL R + +YIS F G P +V + + + + P Sbjct: 33 IFGFILGVLLSL-----PRIYKVPILDQFARVYISFFR--GTPIMVQL---FIVFYGIPA 82 Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCY---TAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307 L I S + P LY A++ Y +AA IAE++R+G+ +V GQ EAA ++GL+ Sbjct: 83 LSSVFGIDLSQMDP----LYAAIATYALSSAATIAEVIRAGVNSVDAGQAEAAYSIGLSS 138 Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367 R+ ++LPQA+ +P + + LK++SLA ++G D+ G T+I + A+E Sbjct: 139 RQTFLRIILPQALYQALPNFGNLVIGYLKDTSLAFSIGVMDMSGRGQTLITLSNHALE-- 196 Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 +Y+SLSI+ L L EK+ Sbjct: 197 -----VYISLSIIYYLTAVLLEYSFKWIEKR 222 >gi|126665865|ref|ZP_01736846.1| glutamine ABC transporter permease [Marinobacter sp. ELB17] gi|126629799|gb|EBA00416.1| glutamine ABC transporter permease [Marinobacter sp. ELB17] Length = 223 Score = 79.7 bits (195), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 47/175 (26%), Positives = 91/175 (52%), Gaps = 23/175 (13%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 + P+L F+ +GLP LV G + P ++ A++ Sbjct: 67 RGTPILVQVLFIFYGLPDLV----------------------GGPIDP-LVAGIAAIALN 103 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 + A+I+E+VR G+ ++ RGQ EA ++LGL+ ++ ++ PQA R +IPPL +Q + +K Sbjct: 104 SGAYISEVVRGGVQSIDRGQTEAGLSLGLSRTQSFWSIVWPQAFRRMIPPLGNQAIVSIK 163 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 ++SL +G +LV G I T A E+ + +YL++++ +++ + + + Sbjct: 164 DTSLFSVIGVGELVRQGQVYIANTFTAFEVYFVVALMYLAITLSLSMVLRYMEKR 218 >gi|148268330|ref|YP_001247273.1| polar amino acid ABC transporter, inner membrane subunit [Staphylococcus aureus subsp. aureus JH9] gi|150394392|ref|YP_001317067.1| polar amino acid ABC transporter, inner membrane subunit [Staphylococcus aureus subsp. aureus JH1] gi|253315189|ref|ZP_04838402.1| polar amino acid ABC transporter, inner membrane subunit [Staphylococcus aureus subsp. aureus str. CF-Marseille] gi|255006646|ref|ZP_05145247.2| polar amino acid ABC transporter, inner membrane subunit [Staphylococcus aureus subsp. aureus Mu50-omega] gi|257793783|ref|ZP_05642762.1| polar amino acid ABC transporter [Staphylococcus aureus A9781] gi|258413720|ref|ZP_05681993.1| polar amino acid ABC transporter [Staphylococcus aureus A9763] gi|258420773|ref|ZP_05683712.1| polar amino acid ABC transporter [Staphylococcus aureus A9719] gi|258438434|ref|ZP_05689718.1| polar amino acid ABC transporter [Staphylococcus aureus A9299] gi|258443879|ref|ZP_05692218.1| polar amino acid ABC transporter [Staphylococcus aureus A8115] gi|258447334|ref|ZP_05695481.1| polar amino acid ABC transporter [Staphylococcus aureus A6300] gi|258448183|ref|ZP_05696310.1| polar amino acid ABC transporter [Staphylococcus aureus A6224] gi|258453384|ref|ZP_05701367.1| polar amino acid ABC transporter [Staphylococcus aureus A5937] gi|269203495|ref|YP_003282764.1| amino acid ABC transporter, permease [Staphylococcus aureus subsp. aureus ED98] gi|282895157|ref|ZP_06303376.1| polar amino acid ABC transporter, inner membrane subunit [Staphylococcus aureus A8117] gi|282928597|ref|ZP_06336196.1| polar amino acid ABC transporter, inner membrane subunit [Staphylococcus aureus A10102] gi|295406165|ref|ZP_06815973.1| polar amino acid ABC transporter [Staphylococcus aureus A8819] gi|297244912|ref|ZP_06928789.1| polar amino acid ABC transporter [Staphylococcus aureus A8796] gi|147741399|gb|ABQ49697.1| polar amino acid ABC transporter, inner membrane subunit [Staphylococcus aureus subsp. aureus JH9] gi|149946844|gb|ABR52780.1| polar amino acid ABC transporter, inner membrane subunit [Staphylococcus aureus subsp. aureus JH1] gi|257787755|gb|EEV26095.1| polar amino acid ABC transporter [Staphylococcus aureus A9781] gi|257839507|gb|EEV63978.1| polar amino acid ABC transporter [Staphylococcus aureus A9763] gi|257843377|gb|EEV67787.1| polar amino acid ABC transporter [Staphylococcus aureus A9719] gi|257848478|gb|EEV72469.1| polar amino acid ABC transporter [Staphylococcus aureus A9299] gi|257851285|gb|EEV75228.1| polar amino acid ABC transporter [Staphylococcus aureus A8115] gi|257853921|gb|EEV76877.1| polar amino acid ABC transporter [Staphylococcus aureus A6300] gi|257858422|gb|EEV81298.1| polar amino acid ABC transporter [Staphylococcus aureus A6224] gi|257864476|gb|EEV87221.1| polar amino acid ABC transporter [Staphylococcus aureus A5937] gi|262075785|gb|ACY11758.1| amino acid ABC transporter, permease [Staphylococcus aureus subsp. aureus ED98] gi|282589806|gb|EFB94891.1| polar amino acid ABC transporter, inner membrane subunit [Staphylococcus aureus A10102] gi|282762501|gb|EFC02642.1| polar amino acid ABC transporter, inner membrane subunit [Staphylococcus aureus A8117] gi|283471129|emb|CAQ50340.1| polar amino acid ABC transporter, inner membrane subunit [Staphylococcus aureus subsp. aureus ST398] gi|294969162|gb|EFG45183.1| polar amino acid ABC transporter [Staphylococcus aureus A8819] gi|297177992|gb|EFH37240.1| polar amino acid ABC transporter [Staphylococcus aureus A8796] gi|315130497|gb|EFT86483.1| polar amino acid ABC transporter, inner membrane subunit [Staphylococcus aureus subsp. aureus CGS03] gi|329732960|gb|EGG69304.1| ABC transporter, permease protein [Staphylococcus aureus subsp. aureus 21193] Length = 485 Score = 79.7 bits (195), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 43/124 (34%), Positives = 78/124 (62%), Gaps = 4/124 (3%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IAL ++A+IAEI+R+G+ AV +GQMEAA +LGL +R+ + V++PQA+++I+P L ++ Sbjct: 360 IALVINSSAYIAEIIRAGINAVDKGQMEAARSLGLNYRQTMKSVIMPQAIKNILPALGNE 419 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN---- 386 ++ L+K SS+ +G +++ + + +L+ +Y L+ ++ MN Sbjct: 420 FVTLIKESSIVSTIGVGEIMFNAQVVQGISFDPFTPLLVAAALYFVLTFVLTRIMNMIEG 479 Query: 387 RLNA 390 RLNA Sbjct: 480 RLNA 483 Score = 44.3 bits (103), Expect = 0.034, Method: Compositional matrix adjust. Identities = 21/67 (31%), Positives = 37/67 (55%) Query: 83 SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142 S Y + L G T ++ G+ +I+G V +LS K+++WI +Y+E+ R P L Sbjct: 275 SKYGSFFLKGIKITILISLIGVALGSILGAFVALMKLSKIKIISWIASIYIEILRGTPML 334 Query: 143 VVIFFLY 149 V +F ++ Sbjct: 335 VQVFIVF 341 >gi|329727185|gb|EGG63641.1| ABC transporter, permease protein [Staphylococcus aureus subsp. aureus 21172] Length = 485 Score = 79.7 bits (195), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 43/124 (34%), Positives = 78/124 (62%), Gaps = 4/124 (3%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IAL ++A+IAEI+R+G+ AV +GQMEAA +LGL +R+ + V++PQA+++I+P L ++ Sbjct: 360 IALVINSSAYIAEIIRAGINAVDKGQMEAARSLGLNYRQTMKSVIMPQAIKNILPALGNE 419 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN---- 386 ++ L+K SS+ +G +++ + + +L+ +Y L+ ++ MN Sbjct: 420 FVTLIKESSIVSTIGVGEIMFNAQVVQGISFDPFTPLLVAAALYFVLTFVLTRIMNMIEG 479 Query: 387 RLNA 390 RLNA Sbjct: 480 RLNA 483 Score = 44.3 bits (103), Expect = 0.034, Method: Compositional matrix adjust. Identities = 21/67 (31%), Positives = 37/67 (55%) Query: 83 SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142 S Y + L G T ++ G+ +I+G V +LS K+++WI +Y+E+ R P L Sbjct: 275 SKYGSFFLKGIKITILISLIGVALGSILGAFVALMKLSKIKIISWIASIYIEILRGTPML 334 Query: 143 VVIFFLY 149 V +F ++ Sbjct: 335 VQVFIVF 341 >gi|328956550|ref|YP_004373936.1| glutamine ABC transporter permease protein GlnM [Carnobacterium sp. 17-4] gi|328672874|gb|AEB28920.1| glutamine ABC transporter permease protein GlnM [Carnobacterium sp. 17-4] Length = 236 Score = 79.7 bits (195), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 35/86 (40%), Positives = 59/86 (68%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 EF + + Y A+I E+VR+G+++V +GQ EAA A G ++ + R ++LPQ ++ I+ Sbjct: 94 EFTIGVVGVGLYHGAYIGEVVRAGILSVTKGQQEAAYAQGFSYTQTMRYIILPQMVKGIL 153 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLV 350 PPLT+Q +NL+KN+S+ + ADL+ Sbjct: 154 PPLTNQAVNLIKNTSVLAIIAGADLM 179 Score = 37.4 bits (85), Expect = 4.6, Method: Compositional matrix adjust. Identities = 22/61 (36%), Positives = 39/61 (63%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151 GF+ T +A ++ + +IG ++G + N ++ I RVYVE+F+NIP ++ IFF+Y Sbjct: 25 GFLRTLQVAILALVLSLVIGIIIGILSTAHNLILRSIARVYVEIFQNIPLVIQIFFMYNG 84 Query: 152 V 152 + Sbjct: 85 L 85 >gi|296276990|ref|ZP_06859497.1| amino acid ABC transporter, permease [Staphylococcus aureus subsp. aureus MR1] Length = 485 Score = 79.7 bits (195), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 43/124 (34%), Positives = 78/124 (62%), Gaps = 4/124 (3%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IAL ++A+IAEI+R+G+ AV +GQMEAA +LGL +R+ + V++PQA+++I+P L ++ Sbjct: 360 IALVINSSAYIAEIIRAGINAVDKGQMEAARSLGLNYRQTMKSVIMPQAIKNILPALGNE 419 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN---- 386 ++ L+K SS+ +G +++ + + +L+ +Y L+ ++ MN Sbjct: 420 FVTLIKESSIVSTIGVGEIMFNAQVVQGISFDPFTPLLVAAALYFVLTFVLTRIMNMIEG 479 Query: 387 RLNA 390 RLNA Sbjct: 480 RLNA 483 Score = 44.3 bits (103), Expect = 0.034, Method: Compositional matrix adjust. Identities = 21/67 (31%), Positives = 37/67 (55%) Query: 83 SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142 S Y + L G T ++ G+ +I+G V +LS K+++WI +Y+E+ R P L Sbjct: 275 SKYGSFFLKGIKITILISLIGVALGSILGAFVALMKLSKIKIISWIASIYIEILRGTPML 334 Query: 143 VVIFFLY 149 V +F ++ Sbjct: 335 VQVFIVF 341 >gi|288905048|ref|YP_003430270.1| amino acid ABC transporter, amino acid-binding/permease protein [Streptococcus gallolyticus UCN34] gi|288731774|emb|CBI13337.1| putative amino acid ABC transporter, amino acid-binding/permease protein [Streptococcus gallolyticus UCN34] Length = 517 Score = 79.7 bits (195), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 61/171 (35%), Positives = 93/171 (54%), Gaps = 14/171 (8%) Query: 191 VFSFVLGIVLS--LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248 V S +L +VL + A R+S + L LYI ++ GLP LV+++L + Sbjct: 25 VVSMILALVLGGVVTAARMSDNL---LISGLTKLYIE--VVRGLPMLVILSL---FFYGL 76 Query: 249 PVLGQFNFIGGSTVSPEF---MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305 P LG FN GS + +S I L+ + F+AEI RSG+ AV GQ E A ++G Sbjct: 77 PELG-FNVPDGSLFGVDLDRLISALIGLTVGESVFVAEIYRSGIQAVDSGQFEGARSIGF 135 Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356 + R V++PQA ++I+P L +++ N +K+SS A +G ADL+ TI Sbjct: 136 NKFQTYRYVIIPQAFKNILPTLGNEFANNIKSSSQASVIGVADLMFTASTI 186 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 31/90 (34%), Positives = 53/90 (58%), Gaps = 4/90 (4%) Query: 84 SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143 +Y + IL G + T +L+ MI A ++G +V A R+S N L++ + ++Y+EV R +P LV Sbjct: 8 NYGSFILDGALMTVFLSVVSMILALVLGGVVTAARMSDNLLISGLTKLYIEVVRGLPMLV 67 Query: 144 VI-FFLYKSVLSVLPIPDHSIVLPFGMFLN 172 ++ F Y +PD S+ FG+ L+ Sbjct: 68 ILSLFFYGLPELGFNVPDGSL---FGVDLD 94 >gi|258423136|ref|ZP_05686030.1| polar amino acid ABC transporter [Staphylococcus aureus A9635] gi|257846700|gb|EEV70720.1| polar amino acid ABC transporter [Staphylococcus aureus A9635] Length = 485 Score = 79.7 bits (195), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 43/124 (34%), Positives = 78/124 (62%), Gaps = 4/124 (3%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IAL ++A+IAEI+R+G+ AV +GQMEAA +LGL +R+ + V++PQA+++I+P L ++ Sbjct: 360 IALVINSSAYIAEIIRAGINAVDKGQMEAARSLGLNYRQTMKSVIMPQAIKNILPSLGNE 419 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN---- 386 ++ L+K SS+ +G +++ + + +L+ +Y L+ ++ MN Sbjct: 420 FVTLIKESSIVSTIGVGEIMFNAQVVQGISFDPFTPLLVAAALYFVLTFVLTRIMNMIEG 479 Query: 387 RLNA 390 RLNA Sbjct: 480 RLNA 483 Score = 44.3 bits (103), Expect = 0.034, Method: Compositional matrix adjust. Identities = 21/67 (31%), Positives = 37/67 (55%) Query: 83 SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142 S Y + L G T ++ G+ +I+G V +LS K+++WI +Y+E+ R P L Sbjct: 275 SKYGSFFLKGIKITILISLIGVALGSILGAFVALMKLSKIKIISWIASIYIEILRGTPML 334 Query: 143 VVIFFLY 149 V +F ++ Sbjct: 335 VQVFIVF 341 >gi|167756843|ref|ZP_02428970.1| hypothetical protein CLORAM_02392 [Clostridium ramosum DSM 1402] gi|167703018|gb|EDS17597.1| hypothetical protein CLORAM_02392 [Clostridium ramosum DSM 1402] Length = 226 Score = 79.7 bits (195), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 59/206 (28%), Positives = 113/206 (54%), Gaps = 13/206 (6%) Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251 F +LG++ + A ++S+H K + + +Y+ LI G P L+ I L+ P+L Sbjct: 33 FGLILGVLGA--AAKISKH---KILRLIGNVYVE--LIRGTPMLLQILF---LYIAFPLL 82 Query: 252 GQFNFIGGSTVSPE-FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 I G P+ ++ IA+S + A+ E++RSG++ V +GQ EA LGL + + Sbjct: 83 --MRSITGERFIPDPYVCGAIAMSINSGAYSTELIRSGIMGVDKGQWEACEVLGLNYTQT 140 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370 +L++LPQA + IIPP+ S+++ L+K+SSL +G +L+ + T I +L Sbjct: 141 MKLIILPQAFKRIIPPIVSEFITLIKDSSLISVLGATELLYSAQILGANTFNLIPPLLAS 200 Query: 371 MFIYLSLSIMIALFMNRLNAKIALKE 396 +YL +++ + F ++ ++++ + Sbjct: 201 AVLYLIMTLTTSYFARKIERRLSVSD 226 Score = 39.7 bits (91), Expect = 0.95, Method: Compositional matrix adjust. Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 7/96 (7%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G + LA + I+G L A ++S +K++ I VYVE+ R P L+ I FL Sbjct: 16 LLQGAGKSLLLAACALFFGLILGVLGAAAKISKHKILRLIGNVYVELIRGTPMLLQILFL 75 Query: 149 Y-------KSVLSVLPIPDHSIVLPFGMFLNNRGLS 177 Y +S+ IPD + M +N+ S Sbjct: 76 YIAFPLLMRSITGERFIPDPYVCGAIAMSINSGAYS 111 >gi|229521466|ref|ZP_04410885.1| amino acid ABC transporter permease protein [Vibrio cholerae TM 11079-80] gi|297578945|ref|ZP_06940873.1| amino acid ABC transporter [Vibrio cholerae RC385] gi|229341564|gb|EEO06567.1| amino acid ABC transporter permease protein [Vibrio cholerae TM 11079-80] gi|297536539|gb|EFH75372.1| amino acid ABC transporter [Vibrio cholerae RC385] Length = 365 Score = 79.7 bits (195), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 41/112 (36%), Positives = 71/112 (63%), Gaps = 8/112 (7%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I + ++AA++AE++R GL A+P+GQ EAA ALGL++ K L++LPQA++ IP + + Sbjct: 235 IGVVMFSAAYMAEVIRGGLQAIPKGQYEAADALGLSYWKKMGLIILPQALKITIPSIVNT 294 Query: 331 YLNLLKNSSLAVAVGFADLVSVG---GTIINQTGQAIE-----IILIWMFIY 374 ++ L K++SL + +G D++ +G T N G A E ++ W+F + Sbjct: 295 FIGLFKDTSLVLIIGMFDVLGIGQSANTDPNWLGFATESYVFVALVFWIFCF 346 >gi|283770942|ref|ZP_06343834.1| polar amino acid ABC transporter inner membrane subunit [Staphylococcus aureus subsp. aureus H19] gi|283461089|gb|EFC08179.1| polar amino acid ABC transporter inner membrane subunit [Staphylococcus aureus subsp. aureus H19] Length = 485 Score = 79.7 bits (195), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 43/124 (34%), Positives = 78/124 (62%), Gaps = 4/124 (3%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IAL ++A+IAEI+R+G+ AV +GQMEAA +LGL +R+ + V++PQA+++I+P L ++ Sbjct: 360 IALVINSSAYIAEIIRAGINAVDKGQMEAARSLGLNYRQTMKSVIMPQAIKNILPALGNE 419 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN---- 386 ++ L+K SS+ +G +++ + + +L+ +Y L+ ++ MN Sbjct: 420 FVTLIKESSIVSTIGVGEIMFNAQVVQGISFDPFTPLLVAAALYFVLTFVLTRIMNMIEG 479 Query: 387 RLNA 390 RLNA Sbjct: 480 RLNA 483 Score = 43.1 bits (100), Expect = 0.076, Method: Compositional matrix adjust. Identities = 21/67 (31%), Positives = 37/67 (55%) Query: 83 SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142 S Y + L G T ++ G+ +I+G V +LS K+++WI +Y+E+ R P L Sbjct: 275 SKYGSFFLKGIKITILISLIGVALGSILGAFVALMKLSKIKIISWIPSIYIEILRGTPML 334 Query: 143 VVIFFLY 149 V +F ++ Sbjct: 335 VQVFIVF 341 >gi|290956974|ref|YP_003488156.1| glutamate uptake system protein [Streptomyces scabiei 87.22] gi|260646500|emb|CBG69597.1| glutamate uptake system [Streptomyces scabiei 87.22] Length = 225 Score = 79.7 bits (195), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 44/122 (36%), Positives = 74/122 (60%) Query: 275 CYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNL 334 YTAAF+ E +RSG+ VP GQ EAA A+GL + L++LPQA R++I PL + + L Sbjct: 104 AYTAAFVCEALRSGINTVPVGQAEAARAIGLNFTQVLGLIVLPQAFRAVIGPLANVLIAL 163 Query: 335 LKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394 KN+++A A+G + + +I + Q + I I+ F ++ L++ L + L+ ++A+ Sbjct: 164 TKNTTVAAAIGVWEAAYLMKGMIEKEAQTLLIGAIFAFGFVVLTLPTGLILGWLSKRLAV 223 Query: 395 KE 396 K Sbjct: 224 KR 225 >gi|254225348|ref|ZP_04918960.1| amino acid ABC transporter, permease protein [Vibrio cholerae V51] gi|125622189|gb|EAZ50511.1| amino acid ABC transporter, permease protein [Vibrio cholerae V51] Length = 365 Score = 79.7 bits (195), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 41/112 (36%), Positives = 71/112 (63%), Gaps = 8/112 (7%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I + ++AA++AE++R GL A+P+GQ EAA ALGL++ K L++LPQA++ IP + + Sbjct: 235 IGVVMFSAAYMAEVIRGGLQAIPKGQYEAADALGLSYWKKMGLIILPQALKITIPSIVNT 294 Query: 331 YLNLLKNSSLAVAVGFADLVSVG---GTIINQTGQAIE-----IILIWMFIY 374 ++ L K++SL + +G D++ +G T N G A E ++ W+F + Sbjct: 295 FIGLFKDTSLVLIIGMFDVLGIGQSANTDPNWLGFATESYVFVALVFWIFCF 346 >gi|325570407|ref|ZP_08146184.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus casseliflavus ATCC 12755] gi|325156617|gb|EGC68794.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus casseliflavus ATCC 12755] Length = 218 Score = 79.7 bits (195), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 53/169 (31%), Positives = 89/169 (52%), Gaps = 37/169 (21%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 VFS VLG+V+ + + LPLL I F F LP I +++ + Sbjct: 50 VFSKVLGVVIDVI-------------RNLPLLLIIFFTYFALPQ---IGIRFNI------ 87 Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 F S +AL+ + +A ++EI R+GL AVP+GQMEA ++ GL++ + Sbjct: 88 ---------------FWSAVVALTIFESAMLSEIFRAGLNAVPKGQMEAGLSTGLSYVEV 132 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359 R +++PQA ++++P + SQ ++L+K++SLAV + +L I Q Sbjct: 133 LRSIVVPQAFKAMLPAIVSQLISLIKDTSLAVIISLPELTHHARIIYGQ 181 >gi|254286188|ref|ZP_04961148.1| amino acid ABC transporter, permease protein [Vibrio cholerae AM-19226] gi|262192391|ref|ZP_06050544.1| ABC-type amino acid transport system permease component [Vibrio cholerae CT 5369-93] gi|150423857|gb|EDN15798.1| amino acid ABC transporter, permease protein [Vibrio cholerae AM-19226] gi|262031744|gb|EEY50329.1| ABC-type amino acid transport system permease component [Vibrio cholerae CT 5369-93] Length = 365 Score = 79.7 bits (195), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 41/112 (36%), Positives = 71/112 (63%), Gaps = 8/112 (7%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I + ++AA++AE++R GL A+P+GQ EAA ALGL++ K L++LPQA++ IP + + Sbjct: 235 IGVVMFSAAYMAEVIRGGLQAIPKGQYEAADALGLSYWKKMGLIILPQALKITIPSIVNT 294 Query: 331 YLNLLKNSSLAVAVGFADLVSVG---GTIINQTGQAIE-----IILIWMFIY 374 ++ L K++SL + +G D++ +G T N G A E ++ W+F + Sbjct: 295 FIGLFKDTSLVLIIGMFDVLGIGQSANTDPNWLGFATESYVFVALVFWIFCF 346 >gi|57650956|ref|YP_187214.1| amino acid ABC transporter, permease protein [Staphylococcus aureus subsp. aureus COL] gi|161510604|ref|YP_001576263.1| ABC transporter ATP-binding protein [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|258407433|ref|ZP_05680576.1| ABC amino acid transporter [Staphylococcus aureus A9763] gi|258422239|ref|ZP_05685151.1| amino acid ABC transporter [Staphylococcus aureus A9719] gi|294848955|ref|ZP_06789700.1| polar amino acid transport system permease [Staphylococcus aureus A9754] gi|295405100|ref|ZP_06814913.1| polar amino acid transport system permease [Staphylococcus aureus A8819] gi|297244157|ref|ZP_06928047.1| polar amino acid transport system permease [Staphylococcus aureus A8796] gi|57285142|gb|AAW37236.1| amino acid ABC transporter, permease protein [Staphylococcus aureus subsp. aureus COL] gi|160369413|gb|ABX30384.1| ABC superfamily ATP binding cassette transporter, membrane protein [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|257840945|gb|EEV65396.1| ABC amino acid transporter [Staphylococcus aureus A9763] gi|257841670|gb|EEV66107.1| amino acid ABC transporter [Staphylococcus aureus A9719] gi|294824334|gb|EFG40758.1| polar amino acid transport system permease [Staphylococcus aureus A9754] gi|294970045|gb|EFG46063.1| polar amino acid transport system permease [Staphylococcus aureus A8819] gi|297178935|gb|EFH38180.1| polar amino acid transport system permease [Staphylococcus aureus A8796] Length = 242 Score = 79.7 bits (195), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 52/155 (33%), Positives = 97/155 (62%), Gaps = 10/155 (6%) Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248 I + +FVLG++++LF T L R K +++ +Y+S +I G P +V + + + + Sbjct: 37 ITLVTFVLGLIIALF-TALMRISTSKILRSISRVYVS--IIRGTPMIVQL---FIIFYGI 90 Query: 249 PVLGQF---NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305 P LG+ + T++P ++ I LS A+ +EI+R G+I++P+GQ EAA ++G+ Sbjct: 91 PELGRLLTNDADNQWTLAPVVAAI-IGLSLNVGAYASEIIRGGIISIPKGQTEAAYSIGM 149 Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340 T+ + + ++LPQA+R IP L + +L+L+K++SL Sbjct: 150 TYGQTIQRIILPQAIRVSIPALGNTFLSLIKDTSL 184 >gi|222823608|ref|YP_002575182.1| amino acid ABC transporter permease [Campylobacter lari RM2100] gi|222538830|gb|ACM63931.1| amino acid ABC transporter, permease protein [Campylobacter lari RM2100] Length = 250 Score = 79.7 bits (195), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 45/119 (37%), Positives = 80/119 (67%), Gaps = 8/119 (6%) Query: 249 PVLGQ---FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305 P+L Q F+ + +T S F IAL ++A++AEIVRSG+ +V +GQMEAA A+GL Sbjct: 101 PILLQLLIFSVVIFATWSDNFYVAIIALGLNSSAYVAEIVRSGIQSVDKGQMEAARAMGL 160 Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364 + + RL++ PQA+++I+P L +++++L K +S+ VG+ ++ + T+ +++ QAI Sbjct: 161 NYSASMRLIIFPQAIKNILPSLMNEFISLFKETSI---VGYISVMDI--TMQSKSLQAI 214 >gi|110798792|ref|YP_696773.1| His/Glu/Gln/Arg/opine amino acid ABC transporter amino acid-binding protein/permease [Clostridium perfringens ATCC 13124] gi|168208796|ref|ZP_02634421.1| amino acid ABC transporter, amino acid-binding protein/permease protein, His/Glu/Gln/Arg/opine family [Clostridium perfringens B str. ATCC 3626] gi|168212869|ref|ZP_02638494.1| amino acid ABC transporter, amino acid-binding protein/permease protein, His/Glu/Gln/Arg/opine family [Clostridium perfringens CPE str. F4969] gi|168215721|ref|ZP_02641346.1| amino acid ABC transporter, amino acid-binding protein/permease protein, His/Glu/Gln/Arg/opine family [Clostridium perfringens NCTC 8239] gi|110673439|gb|ABG82426.1| amino acid ABC transporter, amino acid-binding protein/permease protein, His/Glu/Gln/Arg/opine family [Clostridium perfringens ATCC 13124] gi|170713169|gb|EDT25351.1| amino acid ABC transporter, amino acid-binding protein/permease protein, His/Glu/Gln/Arg/opine family [Clostridium perfringens B str. ATCC 3626] gi|170715496|gb|EDT27678.1| amino acid ABC transporter, amino acid-binding protein/permease protein, His/Glu/Gln/Arg/opine family [Clostridium perfringens CPE str. F4969] gi|182382310|gb|EDT79789.1| amino acid ABC transporter, amino acid-binding protein/permease protein, His/Glu/Gln/Arg/opine family [Clostridium perfringens NCTC 8239] Length = 502 Score = 79.7 bits (195), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 57/161 (35%), Positives = 90/161 (55%), Gaps = 11/161 (6%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 VF +LG+++ + A + R + K + +YIS F G P LV + L L+F P Sbjct: 309 VFGMILGLIVGI-ALAMIRVYKIPVLKQIAEVYISFFR--GTPLLVQLFL---LYFGVP- 361 Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 I F + I L +A+IAEI+RS + A+ +GQMEA ++LG+T +A Sbjct: 362 ----QVIPSLQNMSAFTAALIGLGLNASAYIAEILRSSIDAIDKGQMEACLSLGMTRAQA 417 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 + V+LPQA R IPPL + +++ +K SSLA +G +L++ Sbjct: 418 LKRVVLPQAFRIAIPPLGNIFVDTVKGSSLAFTLGVVELLA 458 >gi|17231658|ref|NP_488206.1| permease protein of amino acid ABC transporter [Nostoc sp. PCC 7120] gi|17133301|dbj|BAB75865.1| permease protein of amino acid ABC transporter [Nostoc sp. PCC 7120] Length = 381 Score = 79.7 bits (195), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 46/111 (41%), Positives = 67/111 (60%), Gaps = 8/111 (7%) Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 L ++AA++AE VR GL AV RGQ+EAA ALGL L++LPQA+R++IP L Q+ Sbjct: 256 GLVLFSAAYMAENVRGGLQAVSRGQVEAAKALGLNTFFVVLLIVLPQALRAVIPALVGQF 315 Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQ---TGQAIEIILI-----WMFIY 374 + L K++SL VG +L + +I+ Q G+ E+ L W+F Y Sbjct: 316 IGLFKDTSLLSLVGLVELTGIARSILAQPQFIGRYAEVYLFIGLIYWLFCY 366 >gi|329295893|ref|ZP_08253229.1| polar amino acid ABC transporter inner membrane subunit [Plautia stali symbiont] Length = 292 Score = 79.7 bits (195), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 41/120 (34%), Positives = 77/120 (64%), Gaps = 3/120 (2%) Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320 TV F++ + LS A+ +E+VR+GL++V GQ EAA A+G+ +A + ++LPQAM Sbjct: 153 TVMTPFLAALLGLSINQGAYTSEVVRAGLLSVDTGQYEAAKAIGMPRLQALQRIILPQAM 212 Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL---IWMFIYLSL 377 R I+PP+ +++++++K +SLA + +++L+ TI + +E++ IW I ++L Sbjct: 213 RVILPPVGNEFISMIKTTSLASMIQYSELLYNAQTIYFANARVMELLFVAGIWYLIIVTL 272 >gi|325063243|gb|ADY66933.1| amino acid ABC transporter, membrane spanning protein [Agrobacterium sp. H13-3] Length = 229 Score = 79.7 bits (195), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 42/124 (33%), Positives = 72/124 (58%) Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327 S I LS AA+++EIVR+G+ AVP+GQ+ AA A+G+T + R ++ PQA R IIPPL Sbjct: 93 STLIGLSLCEAAYLSEIVRAGIAAVPKGQINAARAIGMTEAQVMRYIVAPQAFRIIIPPL 152 Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387 + +LK +S+A + +L+ +I + +E+ ++ YL+++ L R Sbjct: 153 GNSVNGVLKTTSIASIISMEELLRRTQVLIQEKFLVLELFMVAALYYLAMTTAWELIQRR 212 Query: 388 LNAK 391 + + Sbjct: 213 IEKR 216 >gi|153822068|ref|ZP_01974735.1| amino acid ABC transporter, permease protein [Vibrio cholerae B33] gi|126520401|gb|EAZ77624.1| amino acid ABC transporter, permease protein [Vibrio cholerae B33] Length = 279 Score = 79.7 bits (195), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 41/112 (36%), Positives = 71/112 (63%), Gaps = 8/112 (7%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I + ++AA++AE++R GL A+P+GQ EAA ALGL++ K L++LPQA++ IP + + Sbjct: 149 IGVVMFSAAYMAEVIRGGLQAIPKGQYEAADALGLSYWKKMGLIILPQALKITIPSIVNT 208 Query: 331 YLNLLKNSSLAVAVGFADLVSVG---GTIINQTGQAIE-----IILIWMFIY 374 ++ L K++SL + +G D++ +G T N G A E ++ W+F + Sbjct: 209 FIGLFKDTSLVLIIGMFDVLGIGQSANTDPNWLGFATESYVFVALVFWIFCF 260 Score = 36.6 bits (83), Expect = 7.6, Method: Compositional matrix adjust. Identities = 19/55 (34%), Positives = 32/55 (58%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIF 146 G + T +A G+I + IG + GR S ++ +C VY+EV+R +P + V+F Sbjct: 71 GLLVTLIIALVGIIASLPIGVALALGRRSDMPIIRSLCTVYIEVWRGVPLITVLF 125 >gi|16264422|ref|NP_437214.1| putative amino acid uptake ABC transporter permease protein [Sinorhizobium meliloti 1021] gi|15140559|emb|CAC49074.1| ABC transporter, permease [Sinorhizobium meliloti 1021] Length = 290 Score = 79.7 bits (195), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 57/185 (30%), Positives = 102/185 (55%), Gaps = 13/185 (7%) Query: 195 VLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF-GLPTLVLIALKYQLHFDKPVLG- 252 VLG+V+++ R+S + L L+ I +F G P L+ + L + L P G Sbjct: 87 VLGVVIAIM--RISGN------PVLSLIAIGYIWVFRGAPALLQLMLWFNLALIFPTFGI 138 Query: 253 --QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 F F ++P F++ + L A+ +E+VRSGL++V GQ EAA +G+T K Sbjct: 139 PGLFEFRTVDVMTP-FVAAVLGLGISQGAYTSEVVRSGLLSVDSGQYEAARTIGMTQMKM 197 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370 R ++LPQAMR ++PP+ ++ + ++K +SLA + +++++ I + +E++L+ Sbjct: 198 LRRIVLPQAMRVMVPPVGNEVIGMVKLTSLASVIQYSEILHNAQIIYFANTRVLELLLVA 257 Query: 371 MFIYL 375 F YL Sbjct: 258 SFWYL 262 Score = 40.0 bits (92), Expect = 0.72, Method: Compositional matrix adjust. Identities = 23/74 (31%), Positives = 37/74 (50%) Query: 70 FEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWIC 129 F + Q Y D +A AIL G NT + + M ++G ++ R+S N +++ I Sbjct: 48 FSVGQIEWSYVRDFLFAPAILAGLYNTLLMTVAAMGLGIVLGVVIAIMRISGNPVLSLIA 107 Query: 130 RVYVEVFRNIPPLV 143 Y+ VFR P L+ Sbjct: 108 IGYIWVFRGAPALL 121 >gi|298695127|gb|ADI98349.1| substrate-binding glutamine ABC transporter [Staphylococcus aureus subsp. aureus ED133] Length = 485 Score = 79.7 bits (195), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 43/124 (34%), Positives = 78/124 (62%), Gaps = 4/124 (3%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IAL ++A+IAEI+R+G+ AV +GQMEAA +LGL +R+ + V++PQA+++I+P L ++ Sbjct: 360 IALVINSSAYIAEIIRAGINAVDKGQMEAARSLGLNYRQTMKSVIMPQAIKNILPALGNE 419 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN---- 386 ++ L+K SS+ +G +++ + + +L+ +Y L+ ++ MN Sbjct: 420 FVTLIKESSIVSTIGVGEIMFNAQVVQGISFDPFTPLLVAAALYFVLTFVLTRIMNMIEG 479 Query: 387 RLNA 390 RLNA Sbjct: 480 RLNA 483 Score = 44.3 bits (103), Expect = 0.033, Method: Compositional matrix adjust. Identities = 21/67 (31%), Positives = 37/67 (55%) Query: 83 SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142 S Y + L G T ++ G+ +I+G V +LS K+++WI +Y+E+ R P L Sbjct: 275 SKYGSFFLKGIKITILISLIGVALGSILGAFVALMKLSKIKIISWIASIYIEILRGTPML 334 Query: 143 VVIFFLY 149 V +F ++ Sbjct: 335 VQVFIVF 341 >gi|229916228|ref|YP_002884874.1| polar amino acid ABC transporter inner membrane subunit [Exiguobacterium sp. AT1b] gi|229467657|gb|ACQ69429.1| polar amino acid ABC transporter, inner membrane subunit [Exiguobacterium sp. AT1b] Length = 219 Score = 79.7 bits (195), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 49/168 (29%), Positives = 90/168 (53%), Gaps = 10/168 (5%) Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290 G P ++ +A+ +HF P L + ++ + S IA S + A+I+EI+R+G+ Sbjct: 62 GTPLILQLAI---IHFGLPQLTGY-------ITTPYQSAVIAFSLNSGAYISEIIRAGIQ 111 Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 AV +GQ EA+ ALG+ + K R ++LPQA ++I+P L ++ + L K S+L VG D++ Sbjct: 112 AVDKGQWEASDALGVPYVKQLRSIILPQAFKNILPALVNEMITLTKESALVSTVGVLDIM 171 Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 + Q E +L IY ++ +++ RL ++ + + Sbjct: 172 RRAQIVGGQKAIYFEPLLFAGVIYFTIVMILTYLGQRLEKRLRKSDGR 219 >gi|163789546|ref|ZP_02183984.1| hypothetical protein CAT7_08890 [Carnobacterium sp. AT7] gi|159875078|gb|EDP69144.1| hypothetical protein CAT7_08890 [Carnobacterium sp. AT7] Length = 226 Score = 79.7 bits (195), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 66/222 (29%), Positives = 111/222 (50%), Gaps = 23/222 (10%) Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233 +GL + T+ + +F VLG +L++ R + K + + YIS + G P Sbjct: 24 KGLGY---TLGISLASMIFGTVLGFLLAIM-----RMSNSKILRIIARTYIS--FMRGTP 73 Query: 234 TLVLIALKYQLHFDKPVLG-QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292 TLV + + L+F P +G QF + + I S +AA+ AEI+RS L +V Sbjct: 74 TLVFL---FILYFGFPFIGIQFEAVNAAI---------IGFSLSSAAYSAEIIRSSLHSV 121 Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352 GQ EAA ALGL R V++PQAMR +PP+++ L+L+K +SLA + ++ Sbjct: 122 DHGQWEAAYALGLKWPFIMRKVIIPQAMRIAVPPMSNVLLDLIKGTSLAAMITVPEIFQQ 181 Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394 + + + + ++ IY ++ + +F N L K +L Sbjct: 182 AKIVGGREFDYMTMYILVALIYWAICSVFTIFQNYLEKKTSL 223 Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust. Identities = 22/61 (36%), Positives = 34/61 (55%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 IL G T ++ + MI T++G L+ R+S +K++ I R Y+ R P LV +F L Sbjct: 22 ILKGLGYTLGISLASMIFGTVLGFLLAIMRMSNSKILRIIARTYISFMRGTPTLVFLFIL 81 Query: 149 Y 149 Y Sbjct: 82 Y 82 >gi|89070520|ref|ZP_01157809.1| ABC glutamate/glutamine/aspartate/asparagine transporter, inner membrane subunit BztC [Oceanicola granulosus HTCC2516] gi|89043827|gb|EAR50025.1| ABC glutamate/glutamine/aspartate/asparagine transporter, inner membrane subunit BztC [Oceanicola granulosus HTCC2516] Length = 662 Score = 79.7 bits (195), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 45/114 (39%), Positives = 68/114 (59%), Gaps = 8/114 (7%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I ++ + +A+IAE+VR GL A+P GQ EAA ALGL + K+ RLV+LPQA++ IP + + Sbjct: 533 IMVTLFASAYIAEVVRGGLAALPTGQYEAADALGLDYGKSMRLVVLPQALKISIPGIVNT 592 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 ++ L K+++L V +G D + + TI T W IY L + I L Sbjct: 593 FIGLFKDTTLVVFIGLLDPIGLSNTIRASTE--------WNGIYWELFVFIGLL 638 >gi|290956092|ref|YP_003487274.1| permease of ABC transporter [Streptomyces scabiei 87.22] gi|260645618|emb|CBG68709.1| putative permease component of ABC transporter [Streptomyces scabiei 87.22] Length = 291 Score = 79.7 bits (195), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 43/123 (34%), Positives = 76/123 (61%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + L+ AA++AEI+R+ L A+ RGQ EAA ALG+T R+VLLPQA+R ++PPL ++ Sbjct: 122 LTLAVNEAAYMAEIIRAALDAIDRGQTEAAQALGMTPSLTMRVVLLPQALRIVVPPLGNE 181 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 + ++K++SL +G ++ +I + T + EI L+ YL+L+ + + + Sbjct: 182 FNLMMKSTSLLSVIGLQEMFLTAQSINSATFKTFEIFLVAACYYLALTTVWSFVQRFIER 241 Query: 391 KIA 393 ++A Sbjct: 242 RLA 244 >gi|82752008|ref|YP_417749.1| ABC transporter permease [Staphylococcus aureus RF122] gi|82657539|emb|CAI81982.1| ABC transporter permease [Staphylococcus aureus RF122] Length = 239 Score = 79.7 bits (195), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 52/155 (33%), Positives = 97/155 (62%), Gaps = 10/155 (6%) Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248 I + +FVLG++++LF T L R K +++ +Y+S +I G P +V + + + + Sbjct: 34 ITLVTFVLGLIIALF-TALMRISTSKILRSISRVYVS--IIRGTPMIVQL---FIIFYGI 87 Query: 249 PVLGQF---NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305 P LG+ + T++P ++ I LS A+ +EI+R G+I++P+GQ EAA ++G+ Sbjct: 88 PELGRLLTNDADNQWTLAPVVAAI-IGLSLNVGAYASEIIRGGIISIPKGQTEAAYSIGM 146 Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340 T+ + + ++LPQA+R IP L + +L+L+K++SL Sbjct: 147 TYGQTIQRIILPQAIRVSIPALGNTFLSLIKDTSL 181 >gi|27382316|ref|NP_773845.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] gi|27355487|dbj|BAC52470.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] Length = 303 Score = 79.7 bits (195), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 48/175 (27%), Positives = 95/175 (54%), Gaps = 5/175 (2%) Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVS--PEFMSLYIALSCYTAAFIAE 283 T+L G P ++ + L + L P +G V F++ + L A+ +E Sbjct: 126 TWLFRGTPLILQLLLWFNLALVFPTIGIPGLWSARAVDVMTPFLAALLGLGINQGAYTSE 185 Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343 ++R+G+++V GQ EAA A+G+ +A R ++LPQAMR +IPPL ++++ ++K +SLA Sbjct: 186 VMRAGMLSVDIGQYEAAQAIGMGRLRALRRIVLPQAMRVVIPPLGNEFIGMVKATSLASV 245 Query: 344 VGFADLVSVGGTIINQTGQAIEIILI---WMFIYLSLSIMIALFMNRLNAKIALK 395 + + +L+ I + IE++++ W + +S+ + + + R A+ L+ Sbjct: 246 IQYPELLHNAENIYYANSRVIELLIVAGLWYLLVVSILTPLQMLLERRFARGTLR 300 >gi|299133837|ref|ZP_07027031.1| polar amino acid ABC transporter, inner membrane subunit [Afipia sp. 1NLS2] gi|298591673|gb|EFI51874.1| polar amino acid ABC transporter, inner membrane subunit [Afipia sp. 1NLS2] Length = 454 Score = 79.7 bits (195), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 37/96 (38%), Positives = 63/96 (65%) Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315 F+ G + + + ++ + A+ AE++R GL+A+PRGQ EAA ALGL++ K T L++ Sbjct: 307 FLPGDFTIDALVRVLVGIALFAGAYNAEVIRGGLLAIPRGQREAANALGLSYWKTTGLIV 366 Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 LPQA+R +IP L + ++ L K+++L + V DL+ Sbjct: 367 LPQALRHVIPALVNSFIALFKDTTLVLIVSLFDLLG 402 >gi|82751513|ref|YP_417254.1| substrate-binding glutamine ABC transporter [Staphylococcus aureus RF122] gi|82657044|emb|CAI81481.1| substrate-binding glutamine ABC transporter [Staphylococcus aureus RF122] Length = 485 Score = 79.7 bits (195), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 43/124 (34%), Positives = 78/124 (62%), Gaps = 4/124 (3%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IAL ++A+IAEI+R+G+ AV +GQMEAA +LGL +R+ + V++PQA+++I+P L ++ Sbjct: 360 IALVINSSAYIAEIIRAGINAVDKGQMEAARSLGLNYRQTMKSVIMPQAIKNILPALGNE 419 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN---- 386 ++ L+K SS+ +G +++ + + +L+ +Y L+ ++ MN Sbjct: 420 FVTLIKESSIVSTIGVGEIMFNAQVVQGISFDPFTPLLVAAALYFVLTFVLTRIMNMIEG 479 Query: 387 RLNA 390 RLNA Sbjct: 480 RLNA 483 Score = 44.3 bits (103), Expect = 0.032, Method: Compositional matrix adjust. Identities = 21/67 (31%), Positives = 37/67 (55%) Query: 83 SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142 S Y + L G T ++ G+ +I+G V +LS K+++WI +Y+E+ R P L Sbjct: 275 SKYGSFFLKGIKITILISLIGVALGSILGAFVALMKLSKIKIISWIASIYIEILRGTPML 334 Query: 143 VVIFFLY 149 V +F ++ Sbjct: 335 VQVFIVF 341 >gi|33596742|ref|NP_884385.1| ABC transporter transmembrane protein [Bordetella parapertussis 12822] gi|33600510|ref|NP_888070.1| ABC transporter transmembrane protein [Bordetella bronchiseptica RB50] gi|33568109|emb|CAE32022.1| Putative ABC transport system, integral membrane protein [Bordetella bronchiseptica RB50] gi|33573443|emb|CAE37428.1| Putative ABC transport system, integral membrane protein [Bordetella parapertussis] Length = 384 Score = 79.7 bits (195), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 65/260 (25%), Positives = 119/260 (45%), Gaps = 45/260 (17%) Query: 163 IVLP---FGMFLNNRGLSFPTLTMDTNAKIFV----------FSFVLGIVLSLFA----- 204 +VLP + + + L P ++ D I V FS +GIVL+L Sbjct: 146 VVLPPLSYALLVGADALGLPHVSTDLWGGILVTLVVSLVGIVFSLPIGIVLALGRRSELP 205 Query: 205 -TRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVS 263 RL+ + G+ +PL+ + +F T++ + L L D+ Sbjct: 206 FVRLASTVAIELGRGVPLITV----LFMFNTMLPLFLPEGLRPDR--------------- 246 Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 + + ++ + +A++AE+VR GL A+P+GQ E A +LGL + + T L++LPQA+R + Sbjct: 247 --LLRPLVGVTLFASAYMAEVVRGGLQALPKGQYEGAQSLGLGYWQTTFLIVLPQALRIV 304 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII-----LIWMFIYLSLS 378 +P + + ++ L K+++L VG DL+ V IN A + F Y + Sbjct: 305 VPGIVNTFIGLFKDTTLVAMVGILDLLKVVEVAINDPAWATPVTRYTGYAFLAFFYCACC 364 Query: 379 IMIALFMNRLNAKIALKEKK 398 ++ + + +A EK+ Sbjct: 365 YAMSRYSRSVERTLARSEKR 384 >gi|19552549|ref|NP_600551.1| ABC-type transporter, permease component [Corynebacterium glutamicum ATCC 13032] gi|62390213|ref|YP_225615.1| ABC-type amino acid transport system, permease component [Corynebacterium glutamicum ATCC 13032] gi|21324099|dbj|BAB98724.1| ABC-type transporter, permease components [Corynebacterium glutamicum ATCC 13032] gi|41325550|emb|CAF21339.1| ABC-type amino acid transport system, permease component [Corynebacterium glutamicum ATCC 13032] Length = 316 Score = 79.7 bits (195), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 42/88 (47%), Positives = 59/88 (67%) Query: 260 STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319 S +S F+ I L AA++AEIVRSG+ AVP GQMEA+ ALG+ R +LPQA Sbjct: 146 SLLSNMFLLAVIGLGLNEAAYMAEIVRSGIQAVPEGQMEASKALGMNWSMTMRRTILPQA 205 Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFA 347 MR IIPP ++ +++LK +SL VA+ ++ Sbjct: 206 MRIIIPPTGNELISMLKTTSLVVAIPYS 233 >gi|148544726|ref|YP_001272096.1| polar amino acid ABC transporter, inner membrane subunit [Lactobacillus reuteri DSM 20016] gi|184154078|ref|YP_001842419.1| glutamine ABC transporter permease component [Lactobacillus reuteri JCM 1112] gi|194466985|ref|ZP_03072972.1| polar amino acid ABC transporter, inner membrane subunit [Lactobacillus reuteri 100-23] gi|227363851|ref|ZP_03847956.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus reuteri MM2-3] gi|227544433|ref|ZP_03974482.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus reuteri CF48-3A] gi|300908280|ref|ZP_07125745.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus reuteri SD2112] gi|325683061|ref|ZP_08162577.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus reuteri MM4-1A] gi|148531760|gb|ABQ83759.1| amino acid ABC transporter membrane protein 2, PAAT family [Lactobacillus reuteri DSM 20016] gi|183225422|dbj|BAG25939.1| glutamine ABC transporter permease component [Lactobacillus reuteri JCM 1112] gi|194454021|gb|EDX42918.1| polar amino acid ABC transporter, inner membrane subunit [Lactobacillus reuteri 100-23] gi|227071078|gb|EEI09396.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus reuteri MM2-3] gi|227185596|gb|EEI65667.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus reuteri CF48-3A] gi|300894527|gb|EFK87884.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus reuteri SD2112] gi|324977411|gb|EGC14362.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus reuteri MM4-1A] Length = 217 Score = 79.7 bits (195), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 51/149 (34%), Positives = 80/149 (53%), Gaps = 26/149 (17%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYI-ALSC 275 + LPLL I F FGLP + + PE + I ALS Sbjct: 64 RNLPLLLIIFFTYFGLPNI-------------------------GIKPEIIPAAIMALSI 98 Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335 + +A +AEIVRSG+ ++ GQ E A+A GLT +A R+++LPQA+++++P L SQ+++L+ Sbjct: 99 FESAMVAEIVRSGINSIDYGQTEGALANGLTKWQALRIIVLPQAIKNMMPALVSQFISLV 158 Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAI 364 K++SLA + +L+ I Q I Sbjct: 159 KDTSLATIIVLPELMYHAQIIYGQNTNYI 187 >gi|49487195|ref|YP_044416.1| transport system membrane protein [Staphylococcus aureus subsp. aureus MSSA476] gi|87160289|ref|YP_494993.1| ABC transporter, permease protein [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|88196338|ref|YP_501160.1| amino acid ABC transporter permease [Staphylococcus aureus subsp. aureus NCTC 8325] gi|148268848|ref|YP_001247791.1| polar amino acid ABC transporter, inner membrane subunit [Staphylococcus aureus subsp. aureus JH9] gi|150394922|ref|YP_001317597.1| polar amino acid ABC transporter, inner membrane subunit [Staphylococcus aureus subsp. aureus JH1] gi|151222524|ref|YP_001333346.1| amino acid ABC transporter, permease protein [Staphylococcus aureus subsp. aureus str. Newman] gi|221141309|ref|ZP_03565802.1| ABC transporter ATP-binding protein [Staphylococcus aureus subsp. aureus str. JKD6009] gi|253314750|ref|ZP_04837963.1| ABC transporter ATP-binding protein [Staphylococcus aureus subsp. aureus str. CF-Marseille] gi|253730086|ref|ZP_04864251.1| ABC superfamily ATP binding cassette transporter, membrane protein [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253734171|ref|ZP_04868336.1| ABC superfamily ATP binding cassette transporter, membrane protein [Staphylococcus aureus subsp. aureus TCH130] gi|255007187|ref|ZP_05145788.2| ABC transporter ATP-binding protein [Staphylococcus aureus subsp. aureus Mu50-omega] gi|257794753|ref|ZP_05643732.1| amino acid ABC transporter [Staphylococcus aureus A9781] gi|258439631|ref|ZP_05690377.1| transport system membrane protein [Staphylococcus aureus A9299] gi|258442812|ref|ZP_05691372.1| ABC transporter [Staphylococcus aureus A8115] gi|258446488|ref|ZP_05694643.1| ABC transporter [Staphylococcus aureus A6300] gi|258450395|ref|ZP_05698487.1| transport system membrane protein [Staphylococcus aureus A6224] gi|258451282|ref|ZP_05699315.1| transport system membrane protein [Staphylococcus aureus A5948] gi|258455229|ref|ZP_05703189.1| amino acid ABC transporter [Staphylococcus aureus A5937] gi|269204045|ref|YP_003283314.1| amino acid ABC transporter, permease protein [Staphylococcus aureus subsp. aureus ED98] gi|282893860|ref|ZP_06302092.1| polar amino acid transport system permease [Staphylococcus aureus A8117] gi|282920398|ref|ZP_06328121.1| polar amino acid transport system permease [Staphylococcus aureus A9765] gi|282928446|ref|ZP_06336047.1| ABC transporter ATP-binding protein [Staphylococcus aureus A10102] gi|284025433|ref|ZP_06379831.1| ABC transporter ATP-binding protein [Staphylococcus aureus subsp. aureus 132] gi|296276926|ref|ZP_06859433.1| ABC transporter ATP-binding protein [Staphylococcus aureus subsp. aureus MR1] gi|297209767|ref|ZP_06926163.1| ABC superfamily ATP binding cassette transporter, membrane protein [Staphylococcus aureus subsp. aureus ATCC 51811] gi|300910779|ref|ZP_07128229.1| ABC superfamily ATP binding cassette transporter, membrane protein [Staphylococcus aureus subsp. aureus TCH70] gi|304379611|ref|ZP_07362344.1| ABC superfamily ATP binding cassette transporter, membrane protein [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|49245638|emb|CAG44117.1| transport system membrane protein [Staphylococcus aureus subsp. aureus MSSA476] gi|87126263|gb|ABD20777.1| ABC transporter, permease protein [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|87203896|gb|ABD31706.1| amino acid ABC transproter, permease protein, putative [Staphylococcus aureus subsp. aureus NCTC 8325] gi|147741917|gb|ABQ50215.1| polar amino acid ABC transporter, inner membrane subunit [Staphylococcus aureus subsp. aureus JH9] gi|149947374|gb|ABR53310.1| polar amino acid ABC transporter, inner membrane subunit [Staphylococcus aureus subsp. aureus JH1] gi|150375324|dbj|BAF68584.1| amino acid ABC transporter, permease protein [Staphylococcus aureus subsp. aureus str. Newman] gi|253726173|gb|EES94902.1| ABC superfamily ATP binding cassette transporter, membrane protein [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253727866|gb|EES96595.1| ABC superfamily ATP binding cassette transporter, membrane protein [Staphylococcus aureus subsp. aureus TCH130] gi|257788725|gb|EEV27065.1| amino acid ABC transporter [Staphylococcus aureus A9781] gi|257847407|gb|EEV71409.1| transport system membrane protein [Staphylococcus aureus A9299] gi|257851933|gb|EEV75867.1| ABC transporter [Staphylococcus aureus A8115] gi|257854556|gb|EEV77504.1| ABC transporter [Staphylococcus aureus A6300] gi|257856487|gb|EEV79396.1| transport system membrane protein [Staphylococcus aureus A6224] gi|257861074|gb|EEV83889.1| transport system membrane protein [Staphylococcus aureus A5948] gi|257862440|gb|EEV85208.1| amino acid ABC transporter [Staphylococcus aureus A5937] gi|262076335|gb|ACY12308.1| amino acid ABC transporter, permease protein [Staphylococcus aureus subsp. aureus ED98] gi|269941996|emb|CBI50408.1| transport system membrane protein [Staphylococcus aureus subsp. aureus TW20] gi|282589841|gb|EFB94925.1| ABC transporter ATP-binding protein [Staphylococcus aureus A10102] gi|282594344|gb|EFB99330.1| polar amino acid transport system permease [Staphylococcus aureus A9765] gi|282763918|gb|EFC04046.1| polar amino acid transport system permease [Staphylococcus aureus A8117] gi|296885440|gb|EFH24377.1| ABC superfamily ATP binding cassette transporter, membrane protein [Staphylococcus aureus subsp. aureus ATCC 51811] gi|298695677|gb|ADI98899.1| ABC transporter permease [Staphylococcus aureus subsp. aureus ED133] gi|300887759|gb|EFK82954.1| ABC superfamily ATP binding cassette transporter, membrane protein [Staphylococcus aureus subsp. aureus TCH70] gi|302334042|gb|ADL24235.1| amino acid ABC transporter, permease protein [Staphylococcus aureus subsp. aureus JKD6159] gi|302752284|gb|ADL66461.1| ABC transporter ATP-binding protein [Staphylococcus aureus subsp. aureus str. JKD6008] gi|304341787|gb|EFM07693.1| ABC superfamily ATP binding cassette transporter, membrane protein [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|312830759|emb|CBX35601.1| L-cystine transport system permease protein tcyB [Staphylococcus aureus subsp. aureus ECT-R 2] gi|315128573|gb|EFT84577.1| ABC superfamily ATP binding cassette transporter, membrane protein [Staphylococcus aureus subsp. aureus CGS03] gi|315197389|gb|EFU27726.1| ABC superfamily ATP binding cassette transporter, membrane protein [Staphylococcus aureus subsp. aureus CGS01] gi|320139119|gb|EFW31001.1| ABC transporter, permease protein [Staphylococcus aureus subsp. aureus MRSA131] gi|320142504|gb|EFW34313.1| ABC transporter, permease protein [Staphylococcus aureus subsp. aureus MRSA177] gi|323439639|gb|EGA97358.1| ABC transporter permease [Staphylococcus aureus O11] gi|323442696|gb|EGB00323.1| ABC transporter permease [Staphylococcus aureus O46] gi|329315099|gb|AEB89512.1| ABC superfamily ATP binding cassette transporter, membrane protein [Staphylococcus aureus subsp. aureus T0131] gi|329723591|gb|EGG60120.1| ABC transporter, permease protein [Staphylococcus aureus subsp. aureus 21172] gi|329726684|gb|EGG63145.1| ABC transporter, permease protein [Staphylococcus aureus subsp. aureus 21189] gi|329730323|gb|EGG66713.1| ABC transporter, permease protein [Staphylococcus aureus subsp. aureus 21193] Length = 239 Score = 79.7 bits (195), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 52/155 (33%), Positives = 97/155 (62%), Gaps = 10/155 (6%) Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248 I + +FVLG++++LF T L R K +++ +Y+S +I G P +V + + + + Sbjct: 34 ITLVTFVLGLIIALF-TALMRISTSKILRSISRVYVS--IIRGTPMIVQL---FIIFYGI 87 Query: 249 PVLGQF---NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305 P LG+ + T++P ++ I LS A+ +EI+R G+I++P+GQ EAA ++G+ Sbjct: 88 PELGRLLTNDADNQWTLAPVVAAI-IGLSLNVGAYASEIIRGGIISIPKGQTEAAYSIGM 146 Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340 T+ + + ++LPQA+R IP L + +L+L+K++SL Sbjct: 147 TYGQTIQRIILPQAIRVSIPALGNTFLSLIKDTSL 181 >gi|282917128|ref|ZP_06324886.1| polar amino acid ABC transporter, inner membrane subunit [Staphylococcus aureus subsp. aureus D139] gi|282319615|gb|EFB49967.1| polar amino acid ABC transporter, inner membrane subunit [Staphylococcus aureus subsp. aureus D139] Length = 485 Score = 79.7 bits (195), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 43/124 (34%), Positives = 78/124 (62%), Gaps = 4/124 (3%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IAL ++A+IAEI+R+G+ AV +GQMEAA +LGL +R+ + V++PQA+++I+P L ++ Sbjct: 360 IALVINSSAYIAEIIRAGINAVDKGQMEAARSLGLNYRQTMKSVIMPQAIKNILPALGNE 419 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN---- 386 ++ L+K SS+ +G +++ + + +L+ +Y L+ ++ MN Sbjct: 420 FVTLIKESSIVSTIGVGEIMFNAQVVQGISFDPFTPLLVAAALYFVLTFVLTRIMNMIEG 479 Query: 387 RLNA 390 RLNA Sbjct: 480 RLNA 483 Score = 44.3 bits (103), Expect = 0.035, Method: Compositional matrix adjust. Identities = 21/67 (31%), Positives = 37/67 (55%) Query: 83 SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142 S Y + L G T ++ G+ +I+G V +LS K+++WI +Y+E+ R P L Sbjct: 275 SKYGSFFLKGIKITILISLIGVALGSILGAFVALMKLSKIKIISWIASIYIEILRGTPML 334 Query: 143 VVIFFLY 149 V +F ++ Sbjct: 335 VQVFIVF 341 >gi|34495573|ref|NP_899788.1| glutamate/aspartate transport system permease [Chromobacterium violaceum ATCC 12472] gi|34101428|gb|AAQ57797.1| glutamate/aspartate transport system permease protein [Chromobacterium violaceum ATCC 12472] Length = 222 Score = 79.7 bits (195), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 48/141 (34%), Positives = 81/141 (57%), Gaps = 3/141 (2%) Query: 255 NFIGGSTVSP--EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312 N+I G+ + P F S +A + AA+ AEIVR+G+ A+P+GQ AA ALG+ + + Sbjct: 82 NWITGN-LEPVGAFTSCLVAFVMFEAAYFAEIVRAGIQAIPKGQAGAAYALGMRYHQVMG 140 Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372 LV+LPQA+R ++P L Q + L +++SL AVG D ++ + + G E ++ Sbjct: 141 LVVLPQALRKMLPLLLQQSIILFQDTSLVYAVGLMDFLNTARSKGDIVGLPHEFLIFAGM 200 Query: 373 IYLSLSIMIALFMNRLNAKIA 393 +Y +S + + RL ++A Sbjct: 201 VYFLISFGASRLVKRLQQRLA 221 >gi|313617524|gb|EFR89869.1| L-cystine transport system permease protein TcyL [Listeria innocua FSL S4-378] gi|313622668|gb|EFR93035.1| L-cystine transport system permease protein TcyL [Listeria innocua FSL J1-023] Length = 238 Score = 79.7 bits (195), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 62/193 (32%), Positives = 102/193 (52%), Gaps = 24/193 (12%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 +F F+LG++LSL R + +YIS F G P +V + + + + P Sbjct: 33 IFGFILGVILSL-----PRIYQIPVLNQFARVYISFFR--GTPIMVQL---FIVFYGIPA 82 Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCY---TAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307 L I S + P LY A++ Y +AA IAE++R+G+ +V GQ EAA ++GL Sbjct: 83 LSSVFGIDLSQMDP----LYAAIATYALSSAATIAEVIRAGVNSVDAGQAEAAYSVGLNG 138 Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367 R+ ++LPQA+ +P + + LK++SLA ++G D+ G T+I + A+E Sbjct: 139 RQTFLRIILPQALYQALPNFGNLVIGYLKDTSLAFSIGVMDMSGRGQTLITLSNHALE-- 196 Query: 368 LIWMFIYLSLSIM 380 +Y+SLSI+ Sbjct: 197 -----VYISLSII 204 >gi|134100501|ref|YP_001106162.1| amino acid ABC transporter, permease protein [Saccharopolyspora erythraea NRRL 2338] gi|291005020|ref|ZP_06562993.1| amino acid ABC transporter, permease protein [Saccharopolyspora erythraea NRRL 2338] gi|133913124|emb|CAM03237.1| amino acid ABC transporter, permease protein [Saccharopolyspora erythraea NRRL 2338] Length = 315 Score = 79.7 bits (195), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 67/208 (32%), Positives = 105/208 (50%), Gaps = 20/208 (9%) Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240 +T+ A V F+LG VL++ RLS AL Y+ +L +P LV + Sbjct: 76 MTLWLTAVTMVLGFLLGTVLAVM--RLS---GNPVLAALSWGYV--WLFRSIPLLVQLLF 128 Query: 241 KYQLHFDKPVLG-------QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293 + + PVLG N IGG+T + I L + AA+ AEIVR G+++V Sbjct: 129 WFNIGALYPVLGVAPFSVSTVNLIGGTTTA------IIGLVLHEAAYAAEIVRGGILSVD 182 Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353 GQ E+A ALG+ + R ++LPQAMR+IIPP + + LK +S+ + DL+ Sbjct: 183 AGQTESAQALGMRKSRVLRRIVLPQAMRAIIPPSGNLLIGTLKGTSIVSVIAVHDLLYSV 242 Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMI 381 I N+ I ++L+ YL ++ ++ Sbjct: 243 QIIYNRNYLVIPLLLVACIWYLVVTTVL 270 Score = 40.4 bits (93), Expect = 0.43, Method: Compositional matrix adjust. Identities = 27/75 (36%), Positives = 41/75 (54%), Gaps = 5/75 (6%) Query: 88 AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147 A+L G + T WL M+ ++GT++ RLS N ++A + YV +FR+IP LV + F Sbjct: 69 AVLHGLLMTLWLTAVTMVLGFLLGTVLAVMRLSGNPVLAALSWGYVWLFRSIPLLVQLLF 128 Query: 148 LYK-----SVLSVLP 157 + VL V P Sbjct: 129 WFNIGALYPVLGVAP 143 >gi|302205790|gb|ADL10132.1| glutamate transporter permease protein GluD [Corynebacterium pseudotuberculosis C231] gi|308276025|gb|ADO25924.1| glutamate transporter permease protein GluD [Corynebacterium pseudotuberculosis I19] Length = 312 Score = 79.7 bits (195), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 45/123 (36%), Positives = 74/123 (60%), Gaps = 8/123 (6%) Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290 +P L+LI YQ L + + ++ F ++ +L+ Y A IAEI+R+G+ Sbjct: 115 AVPVLLLIIFSYQ------ALAMYKVVPPRELA--FTAVVFSLTMYNGAVIAEILRAGIR 166 Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 A+PRGQ EAA ALGL H + + +LLPQA+ +++P L +Q + LK+S+L +G+ ++V Sbjct: 167 ALPRGQTEAAQALGLGHWQTMQKILLPQAVAAMLPALIAQAVIALKDSALGYQIGYVEIV 226 Query: 351 SVG 353 G Sbjct: 227 RQG 229 Score = 40.0 bits (92), Expect = 0.73, Method: Compositional matrix adjust. Identities = 30/75 (40%), Positives = 45/75 (60%) Query: 78 PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137 P+ ++ T +L G V T AFS +I A I+G L+G GRLS + + WIC E FR Sbjct: 55 PFIDPRTWNTYLLPGLVGTLKSAFSSVILAIILGVLLGLGRLSRRRSLRWICAAITEFFR 114 Query: 138 NIPPLVVIFFLYKSV 152 +P L++I F Y+++ Sbjct: 115 AVPVLLLIIFSYQAL 129 >gi|260768538|ref|ZP_05877472.1| amino acid ABC transporter permease protein [Vibrio furnissii CIP 102972] gi|260616568|gb|EEX41753.1| amino acid ABC transporter permease protein [Vibrio furnissii CIP 102972] gi|315180250|gb|ADT87164.1| general L-amino acid transport system permease protein AapM [Vibrio furnissii NCTC 11218] Length = 365 Score = 79.7 bits (195), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 35/98 (35%), Positives = 66/98 (67%) Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315 F+ + + + + I + ++AA++AE++R GL A+P+GQ EAA ALGL++ K L++ Sbjct: 220 FLSEGSETDKLLRALIGVVMFSAAYMAEVIRGGLQAIPKGQYEAADALGLSYWKKMGLII 279 Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353 LPQA++ IP + + ++ L K++SL + +G D++ +G Sbjct: 280 LPQALKITIPSIVNTFIGLFKDTSLVLIIGMFDVLGIG 317 >gi|157376893|ref|YP_001475493.1| polar amino acid ABC transporter, inner membrane subunit [Shewanella sediminis HAW-EB3] gi|157319267|gb|ABV38365.1| polar amino acid ABC transporter, inner membrane subunit [Shewanella sediminis HAW-EB3] Length = 226 Score = 79.7 bits (195), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 43/123 (34%), Positives = 78/123 (63%), Gaps = 4/123 (3%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IA + A+I+EI+R+G+ AV +GQMEAA +LGL+H + V+LPQA+++I+P L ++ Sbjct: 101 IAFGLNSGAYISEIIRAGIQAVDKGQMEAARSLGLSHGATMKEVILPQAIKNILPSLGNE 160 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA----IEIILIWMFIYLSLSIMIALFMN 386 ++ LLK +++ +G DL+ G I ++T + LI++ + S +++++ F Sbjct: 161 FIVLLKETAVIGFIGGVDLMRAGEIIRSRTFEDSVPLFTCALIYLLLTYSFTLLLSKFET 220 Query: 387 RLN 389 RL Sbjct: 221 RLK 223 >gi|45358114|ref|NP_987671.1| binding-protein dependent transport system inner membrane protein [Methanococcus maripaludis S2] gi|44920871|emb|CAF30107.1| Binding-protein-dependent transport systems inner membrane component [Methanococcus maripaludis S2] Length = 219 Score = 79.7 bits (195), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 60/205 (29%), Positives = 108/205 (52%), Gaps = 13/205 (6%) Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247 KI + SF+L +++++ KT + + Y+ F G P L+ + + +++ Sbjct: 22 KITIMSFLLAVIIAVLVGSTRAMNFSKTLDLVLMAYVEVFR--GTPLLIQL---FFIYYG 76 Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307 P +G T+S F ++ + LS A+I+EI+R+ + +VP GQ EAA +LG+ Sbjct: 77 LPSIGI-------TMSSTFAAV-LGLSLNGGAYISEIIRAAIQSVPVGQFEAAESLGMGK 128 Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367 ++ ++LPQA R IPPL + + ++LK SSL + +L +G I +T + EI Sbjct: 129 IESMVYIVLPQAFRITIPPLVNSFSSILKESSLISVLAITELTRIGQLIYTRTSRPFEIY 188 Query: 368 LIWMFIYLSLSIMIALFMNRLNAKI 392 L IYL L +I++ ++ K+ Sbjct: 189 LTIGLIYLILVSIISIGSWKIEKKL 213 >gi|88856305|ref|ZP_01130964.1| ABC transporter permease protein [marine actinobacterium PHSC20C1] gi|88814389|gb|EAR24252.1| ABC transporter permease protein [marine actinobacterium PHSC20C1] Length = 319 Score = 79.7 bits (195), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 60/203 (29%), Positives = 105/203 (51%), Gaps = 8/203 (3%) Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249 + LG++L++ RLS++ + + + YI +L G P LV + L + L P Sbjct: 84 MLIGLTLGVLLAI--ARLSKN---RVMQTVSSGYI--WLFRGTPLLVQLLLWFNLALFFP 136 Query: 250 VLGQFNF-IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308 LG + + + F + + L A++AEIVR G+ +V RGQ+EAA ALG+ R Sbjct: 137 RLGFGELSVDTNVIITAFGAAILGLGLNEGAYMAEIVRGGIQSVNRGQIEAAAALGMRQR 196 Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368 T ++LPQAMR IIPP+ + + +LK +SL + DL++ I + E+++ Sbjct: 197 HVTWRIVLPQAMRVIIPPIGNNLITMLKMTSLVSVIAVPDLLNRAQAISAKNFYVFEMLI 256 Query: 369 IWMFIYLSLSIMIALFMNRLNAK 391 + YL ++ + + +L + Sbjct: 257 VATVWYLLMTTIFTIIQMQLEKR 279 >gi|326692574|ref|ZP_08229579.1| amino acid ABC transporter [Leuconostoc argentinum KCTC 3773] Length = 491 Score = 79.7 bits (195), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 42/128 (32%), Positives = 78/128 (60%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + +A+ +AA++AEI+RSG+ +V GQ EAA +LGL+ RK R ++LPQA+++I+P Sbjct: 360 FAAGSLAMGLNSAAYVAEIIRSGINSVDGGQTEAARSLGLSKRKTMRFIVLPQAVKNILP 419 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 L ++++ ++K S+ +G +L+ G + + + +LI FIY L+ I+ + Sbjct: 420 ALGNEFVTVIKEGSVVSVIGVGELMFQTGVVQGASFKPFFPLLIASFIYFVLTFTISRAL 479 Query: 386 NRLNAKIA 393 ++A Sbjct: 480 GYAEKRMA 487 >gi|224368641|ref|YP_002603090.1| ABC-type amino acid transporter, permease component [Desulfobacterium autotrophicum HRM2] gi|223691357|gb|ACN14640.1| ABC-type amino acid transporter, permease component [Desulfobacterium autotrophicum HRM2] Length = 226 Score = 79.7 bits (195), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 68/228 (29%), Positives = 114/228 (50%), Gaps = 23/228 (10%) Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL 228 +FL+ G +F + + A IF+ + V+G++ A R+S+ K K + YI L Sbjct: 20 LFLHGLGATF----LISTASIFL-ALVVGVIAC--ACRISQI---KYLKYPAIAYIE--L 67 Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288 I P LV I Y +F P LG PE + +AL + A+IAEI+R+G Sbjct: 68 IRSTPLLVQI---YFFYFGLPTLG--------VRIPEIQTGILALMLNSGAYIAEIIRAG 116 Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348 + +V G +EA I+ GL + + R ++LPQA+ + IPPL Q + L+K+S+L + A+ Sbjct: 117 ISSVDEGHIEAGISSGLNYVQRMRFIILPQALGATIPPLLGQAIVLVKDSALLSLISVAE 176 Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 L G + ++ E L F Y+ + ++ + K+ +E Sbjct: 177 LTRCGQVLTSERFMPTEAFLTVAFFYMCIYFVLKSLADWSQKKLIFRE 224 >gi|57242586|ref|ZP_00370523.1| MW1799 [Campylobacter upsaliensis RM3195] gi|57016515|gb|EAL53299.1| MW1799 [Campylobacter upsaliensis RM3195] Length = 211 Score = 79.7 bits (195), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 51/135 (37%), Positives = 86/135 (63%), Gaps = 16/135 (11%) Query: 266 FMSLY---IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322 F +LY +AL ++A+IAEIVRSG+ +V +GQMEAA A+GL ++ R ++LPQA+++ Sbjct: 79 FDNLYAAILALGLNSSAYIAEIVRSGINSVDKGQMEAARAMGLDYQSTMREIILPQALKN 138 Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI-----EIILIWMFIYLSL 377 I+P L +++++L K +S+ VGF +V + T+ +++ QA+ II + Y+S+ Sbjct: 139 ILPALANEFISLFKETSV---VGFISVVDI--TMQSKSLQAVLYNPKPIIFTGLVYYVSV 193 Query: 378 SIM---IALFMNRLN 389 I + L RLN Sbjct: 194 KIFSLGVRLLEKRLN 208 >gi|282856549|ref|ZP_06265823.1| gln/Arg/Lys/His-binding protein and permease protein [Pyramidobacter piscolens W5455] gi|282585615|gb|EFB90909.1| gln/Arg/Lys/His-binding protein and permease protein [Pyramidobacter piscolens W5455] Length = 519 Score = 79.7 bits (195), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 57/142 (40%), Positives = 82/142 (57%), Gaps = 8/142 (5%) Query: 222 LYISTFLIFGLPTLVLIALKY-QLHFDKPVLGQ--FNFIG----GSTVSPEFMSLYIALS 274 L+I+ +FG L A Y + PV+ Q F F G G +SP F++ +AL Sbjct: 323 LFIAVCRLFGPLPLRAFATGYTEFIRGTPVMIQLFFIFYGLPNVGVQLSP-FVAGTLALG 381 Query: 275 CYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNL 334 AA+ +E R+GL AVPR QME A+ALG+T R+A R V+LPQA+R + P+T+ ++ L Sbjct: 382 LNYAAYESENYRAGLEAVPRAQMEGALALGMTKREALRHVILPQAIRVSLLPMTNDFIAL 441 Query: 335 LKNSSLAVAVGFADLVSVGGTI 356 LK+SSL + DL G + Sbjct: 442 LKDSSLVSIITLVDLTRTYGQL 463 >gi|227505029|ref|ZP_03935078.1| ABC superfamily ATP binding cassette transporter [Corynebacterium striatum ATCC 6940] gi|227198393|gb|EEI78441.1| ABC superfamily ATP binding cassette transporter [Corynebacterium striatum ATCC 6940] Length = 326 Score = 79.7 bits (195), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 52/142 (36%), Positives = 80/142 (56%), Gaps = 4/142 (2%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 S ++ F+ + L AA++AEIVRSG+ AVP GQ EA+ ALG+ R +LPQ Sbjct: 157 ASVLTNAFLLSVLGLGLNEAAYMAEIVRSGISAVPEGQKEASKALGMGWWMTMRRTVLPQ 216 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFA-DLVSVGGTIINQTGQAIEIILI---WMFIY 374 AMR IIPP +++++LLK SSL VAV + ++ I + I ++L+ W + Sbjct: 217 AMRIIIPPTGNEFISLLKTSSLVVAVPYTYEIFGRATDISAALFEPIPLLLVAATWYLVI 276 Query: 375 LSLSIMIALFMNRLNAKIALKE 396 SL ++ F+ R + A +E Sbjct: 277 TSLLMIAQYFLERRFDRGATRE 298 >gi|182419568|ref|ZP_02950816.1| amino acid ABC transporter, permease protein PEB1 [Clostridium butyricum 5521] gi|237668932|ref|ZP_04528916.1| polar amino acid ABC transporter, inner membrane subunit [Clostridium butyricum E4 str. BoNT E BL5262] gi|182376603|gb|EDT74178.1| amino acid ABC transporter, permease protein PEB1 [Clostridium butyricum 5521] gi|237657280|gb|EEP54836.1| polar amino acid ABC transporter, inner membrane subunit [Clostridium butyricum E4 str. BoNT E BL5262] Length = 242 Score = 79.7 bits (195), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 35/89 (39%), Positives = 61/89 (68%) Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321 V P F+ + + Y A+I+E+VR+G+ ++ +GQ EA+ + G +H + R ++LPQ ++ Sbjct: 89 VLPVFLIGILGVGIYHGAYISEVVRTGITSISKGQFEASYSQGFSHIETMRYIILPQTIK 148 Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 IIPPLT+Q +NL+KN+S+ + ADL+ Sbjct: 149 IIIPPLTNQLVNLIKNTSVLAMIAGADLM 177 Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust. Identities = 27/77 (35%), Positives = 42/77 (54%), Gaps = 6/77 (7%) Query: 90 LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 L G + T + G+ A ++GT+ G S KL+ I RVYVE+ +N P ++ +FFL+ Sbjct: 21 LEGLIVTIEVGLLGLALAIVLGTISGVMSTSKIKLLRIISRVYVEIIQNTPLVIQVFFLF 80 Query: 150 KSVLSVLPIPDHSIVLP 166 +P +IVLP Sbjct: 81 NG------LPYINIVLP 91 >gi|229591464|ref|YP_002873583.1| putative ABC transporter permease [Pseudomonas fluorescens SBW25] gi|229363330|emb|CAY50452.1| putative permease component of ABC transporter [Pseudomonas fluorescens SBW25] Length = 276 Score = 79.7 bits (195), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 46/119 (38%), Positives = 73/119 (61%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IALS A+++EI R+G++ V +GQ AA ALG+ ++LPQAMR+IIPP TSQ Sbjct: 147 IALSLNYGAYLSEIFRAGILGVSQGQRNAASALGMGRAVTFWQIVLPQAMRTIIPPTTSQ 206 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 ++++LK+SSL +G +++ + + + + IE++ IY LSI + L RL Sbjct: 207 FISMLKDSSLVSVMGVWEVMFLAQSYGRSSYRYIEMLTTAAVIYWLLSIGLELIQARLE 265 >gi|169796219|ref|YP_001714012.1| glutamate/aspartate ABC transporter membrane protein [Acinetobacter baumannii AYE] gi|184157852|ref|YP_001846191.1| amino acid ABC transporter permease [Acinetobacter baumannii ACICU] gi|213157047|ref|YP_002319092.1| glutamate/aspartate transport system permease protein GltK [Acinetobacter baumannii AB0057] gi|215483674|ref|YP_002325895.1| Binding-protein-dependent transport system inner membrane component family protein [Acinetobacter baumannii AB307-0294] gi|239502271|ref|ZP_04661581.1| Binding-protein-dependent transport system inner membrane component family protein [Acinetobacter baumannii AB900] gi|260555281|ref|ZP_05827502.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Acinetobacter baumannii ATCC 19606] gi|294838746|ref|ZP_06783429.1| Binding-protein-dependent transport system inner membrane component family protein [Acinetobacter sp. 6013113] gi|294841309|ref|ZP_06785992.1| Binding-protein-dependent transport system inner membrane component family protein [Acinetobacter sp. 6014059] gi|294859046|ref|ZP_06796815.1| Binding-protein-dependent transport system inner membrane component family protein [Acinetobacter sp. 6013150] gi|301347720|ref|ZP_07228461.1| Binding-protein-dependent transport system inner membrane component family protein [Acinetobacter baumannii AB056] gi|301512790|ref|ZP_07238027.1| Binding-protein-dependent transport system inner membrane component family protein [Acinetobacter baumannii AB058] gi|301596775|ref|ZP_07241783.1| Binding-protein-dependent transport system inner membrane component family protein [Acinetobacter baumannii AB059] gi|169149146|emb|CAM87025.1| glutamate/aspartate transport protein (ABC superfamily, membrane) [Acinetobacter baumannii AYE] gi|183209446|gb|ACC56844.1| ABC-type amino acid transport system, permease component [Acinetobacter baumannii ACICU] gi|193077142|gb|ABO11920.2| glutamate/aspartate transport protein [Acinetobacter baumannii ATCC 17978] gi|213056207|gb|ACJ41109.1| glutamate/aspartate transport system permease protein GltK [Acinetobacter baumannii AB0057] gi|213988874|gb|ACJ59173.1| Binding-protein-dependent transport system inner membrane component family protein [Acinetobacter baumannii AB307-0294] gi|260411823|gb|EEX05120.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Acinetobacter baumannii ATCC 19606] gi|322508167|gb|ADX03621.1| ABC-type amino acid transport system, permease component [Acinetobacter baumannii 1656-2] gi|323517741|gb|ADX92122.1| ABC-type amino acid transport system, permease component [Acinetobacter baumannii TCDC-AB0715] Length = 225 Score = 79.7 bits (195), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 47/143 (32%), Positives = 79/143 (55%), Gaps = 3/143 (2%) Query: 254 FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313 F F + P F S+ + + + AAF +EIVRSG+ ++ +GQ+ A ALG T+ ++ R Sbjct: 82 FEFQSDTYWGPLFSSV-VTFAIFEAAFFSEIVRSGIQSISKGQVNAGYALGFTYGQSMRY 140 Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE--IILIWM 371 V+LPQA R+++P L +Q + L ++ SL + D + T+ N G + LI Sbjct: 141 VVLPQAFRNMLPVLLTQTIILFQDVSLVYVISAPDFLGRADTLANTYGPETKATFYLIVA 200 Query: 372 FIYLSLSIMIALFMNRLNAKIAL 394 +Y S +++ + RL KIA+ Sbjct: 201 VVYFCSSFVLSQLVKRLQKKIAI 223 Score = 40.4 bits (93), Expect = 0.55, Method: Compositional matrix adjust. Identities = 23/62 (37%), Positives = 34/62 (54%) Query: 88 AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147 A+ GF+ T + M+ +IGT + RLS N L + + YV++FR IP + VIF Sbjct: 14 ALKEGFIFTLTVTVLAMMGGILIGTPLAMMRLSNNALASNFAKFYVDLFRGIPLIQVIFI 73 Query: 148 LY 149 Y Sbjct: 74 FY 75 >gi|91789329|ref|YP_550281.1| amino acid ABC transporter permease [Polaromonas sp. JS666] gi|91698554|gb|ABE45383.1| amino acid ABC transporter membrane protein 2, PAAT family [Polaromonas sp. JS666] Length = 216 Score = 79.7 bits (195), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 41/122 (33%), Positives = 71/122 (58%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +AL+ YT+AF+ EI R + A+P+GQ EA +L L+ R+ + V++PQA++ IPP Sbjct: 91 VALTLYTSAFLTEIWRGCVAAIPKGQWEAGQSLALSFRELLQHVVVPQALKIAIPPTVGF 150 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 + ++K ++LA +GF +L G I N T + + +Y +L ++L+ RL Sbjct: 151 LVQVVKGTALASVIGFIELTKAGTMITNATFKPFVVYSCVALLYFALCFPVSLYARRLER 210 Query: 391 KI 392 K+ Sbjct: 211 KL 212 >gi|289450823|ref|YP_003475334.1| putative arginine ABC transporter permease ArtQ [Clostridiales genomosp. BVAB3 str. UPII9-5] gi|289185370|gb|ADC91795.1| putative arginine ABC transporter, permease protein ArtQ [Clostridiales genomosp. BVAB3 str. UPII9-5] Length = 229 Score = 79.7 bits (195), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 61/203 (30%), Positives = 113/203 (55%), Gaps = 19/203 (9%) Query: 191 VFSFVLGIVLSLFATRLSRH-FHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249 +F F+LG+ ++ R SR F K +YI F G P LV + + Y F Sbjct: 34 LFGFILGLFIAFM--RGSRSPFLSVPAK----IYIQIFR--GTPLLVQVLIAY-YGFASV 84 Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309 + ++N++ +P +SL IA+ ++A+++E++RSG+ +V RGQ EAA +LG+ ++ Sbjct: 85 IPNEYNYLK----NPLVLSL-IAICMNSSAYVSEVIRSGINSVDRGQFEAASSLGMKKKQ 139 Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS----VGGTIINQTGQAIE 365 ++LPQA+++++P L ++++ L+K S++ VG DL+ G+ + + Sbjct: 140 IMYYIILPQAIKTVLPALGNEFITLIKESAIVAFVGIGDLMYQAKIAQGSTLKPFMPYVT 199 Query: 366 IILIWMFIYLSLSIMIALFMNRL 388 LI++ + LS +I+LF RL Sbjct: 200 AALIYLVLVTVLSKVISLFERRL 222 >gi|299535497|ref|ZP_07048818.1| polar amino acid transport system permease protein [Lysinibacillus fusiformis ZC1] gi|298728697|gb|EFI69251.1| polar amino acid transport system permease protein [Lysinibacillus fusiformis ZC1] Length = 234 Score = 79.7 bits (195), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 64/196 (32%), Positives = 106/196 (54%), Gaps = 20/196 (10%) Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247 +I VFS + G++L + + + H K + +YIS I G P LV + L + + Sbjct: 26 EILVFSILFGMMLGI-VLAIPKLLHIPILKQVITIYIS--FIRGTPILVQLFLVF---YG 79 Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYT---AAFIAEIVRSGLIAVPRGQMEAAIALG 304 P L + I + + ++Y + YT AA AEI R+ ++ V RGQMEAA ++G Sbjct: 80 IPALLKLIHIDVTRMD----AMYFVIITYTFSNAAAFAEIFRAAILTVDRGQMEAAYSVG 135 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364 L+ +A ++ PQA+R P + + ++ LK++SLA ++G D+V G T+I T +A Sbjct: 136 LSGSQAFMRIVFPQAIRVAFPNIANTMISSLKDTSLAFSIGVMDMVGRGETLIASTTRAF 195 Query: 365 EIILIWMFIYLSLSIM 380 E IY++LSI+ Sbjct: 196 E-------IYVALSIV 204 >gi|145295472|ref|YP_001138293.1| hypothetical protein cgR_1405 [Corynebacterium glutamicum R] gi|140845392|dbj|BAF54391.1| hypothetical protein [Corynebacterium glutamicum R] Length = 316 Score = 79.7 bits (195), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 42/88 (47%), Positives = 59/88 (67%) Query: 260 STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319 S +S F+ I L AA++AEIVRSG+ AVP GQMEA+ ALG+ R +LPQA Sbjct: 146 SLLSNMFLLAVIGLGLNEAAYMAEIVRSGIQAVPEGQMEASKALGMNWSMTMRRTILPQA 205 Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFA 347 MR IIPP ++ +++LK +SL VA+ ++ Sbjct: 206 MRIIIPPTGNELISMLKTTSLVVAIPYS 233 >gi|89069637|ref|ZP_01156976.1| putative amino-acid transport system permease abc transporter protein [Oceanicola granulosus HTCC2516] gi|89044835|gb|EAR50935.1| putative amino-acid transport system permease abc transporter protein [Oceanicola granulosus HTCC2516] Length = 264 Score = 79.7 bits (195), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 45/109 (41%), Positives = 68/109 (62%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +ALS +AFIAE+ R+GL +V GQ+EAA ALGL+ + R V+ PQA R I+PPL + Sbjct: 137 MALSIGYSAFIAEVFRAGLQSVDEGQVEAAEALGLSPWRRFRHVVFPQAFRRILPPLGND 196 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379 ++ ++K+SSL +G AD+ +G + E + FIYL ++I Sbjct: 197 FVAMVKDSSLVSVLGVADVTQMGKVTAAGNFRYFETYNMVAFIYLVMTI 245 >gi|47569425|ref|ZP_00240107.1| cystine transport system permease protein [Bacillus cereus G9241] gi|47553933|gb|EAL12302.1| cystine transport system permease protein [Bacillus cereus G9241] Length = 285 Score = 79.7 bits (195), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 50/126 (39%), Positives = 74/126 (58%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IAL+ + A+I EI R + +V RGQMEAA +LG+ + A R ++LPQA R IPPL +Q Sbjct: 144 IALAIHNGAYITEIFRGSIQSVDRGQMEAARSLGMPYPLAMRRIVLPQAFRQSIPPLGNQ 203 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++ LK+SSL VG ++L G +I Q +E +I YL L ++ +N L Sbjct: 204 FIIGLKDSSLVAYVGLSELWGSGLSIAAGNFQQLETYIIVGLYYLVLVLLFTYLVNLLEK 263 Query: 391 KIALKE 396 ++ KE Sbjct: 264 RLQRKE 269 >gi|306821309|ref|ZP_07454919.1| polar amino acid ABC superfamily ATP binding cassette transporter permease [Eubacterium yurii subsp. margaretiae ATCC 43715] gi|304550650|gb|EFM38631.1| polar amino acid ABC superfamily ATP binding cassette transporter permease [Eubacterium yurii subsp. margaretiae ATCC 43715] Length = 204 Score = 79.7 bits (195), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 63/201 (31%), Positives = 111/201 (55%), Gaps = 21/201 (10%) Query: 195 VLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQF 254 ++G+VL+ F RLS+ K + YI LI G P L I L + F G + Sbjct: 16 LIGLVLAFF--RLSKA---KILNLISTTYIE--LIRGTPLLAQIML---VKF-----GLY 60 Query: 255 NFIGGST-VS-PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312 + I T +S P+ IA+S + A++ EI+RSG+ +V +GQMEA +LG++ R Sbjct: 61 DLITAKTKISIPDIAIGIIAVSLNSGAYVCEIIRSGISSVDKGQMEAGRSLGMSKSMTMR 120 Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE----IIL 368 L++LP A+++I+P L ++++ ++K +S+ +G DL + + + T ++ E + L Sbjct: 121 LIVLPLAVKNILPALCNEFVTVIKETSIISYIGVTDLFYIANAVSSMTYKSFESMLAVAL 180 Query: 369 IWMFIYLSLSIMIALFMNRLN 389 I+ I +LS ++ L RL+ Sbjct: 181 IYFIITFTLSKLVRLLERRLS 201 >gi|77456537|ref|YP_346042.1| amino acid ABC transporter permease [Pseudomonas fluorescens Pf0-1] gi|77380540|gb|ABA72053.1| amino acid ABC transporter membrane protein 2, PAAT family [Pseudomonas fluorescens Pf0-1] Length = 229 Score = 79.7 bits (195), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 64/191 (33%), Positives = 103/191 (53%), Gaps = 17/191 (8%) Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239 TLT++ A + +L I L + R S+ ++ + ALP YI F G P LV + Sbjct: 18 TLTLELVAIAVIAGLLLAIPLGI--ARSSKLWYVR---ALPYAYI--FFFRGTPLLVQLF 70 Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295 L Y L QF+ + S++ P F ++ +TAA+IAEI+R + A+P G Sbjct: 71 LVYY------GLAQFDAVRNSSMWPYLRDPFWCATATMTLHTAAYIAEILRGAIQAIPPG 124 Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355 ++EAA ALG++ KA ++LP+A R +P +++ + +LK S+LA V +L + T Sbjct: 125 EIEAARALGMSRPKALFYIILPRAARIGLPAYSNEVILMLKASALASTVTLLELTGMART 184 Query: 356 IINQTGQAIEI 366 II +T +EI Sbjct: 185 IIARTYLPVEI 195 >gi|26987805|ref|NP_743230.1| polar amino acid ABC transporter inner membrane subunit [Pseudomonas putida KT2440] gi|24982502|gb|AAN66694.1|AE016297_8 amino acid ABC transporter, permease protein [Pseudomonas putida KT2440] Length = 223 Score = 79.7 bits (195), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 57/206 (27%), Positives = 101/206 (49%), Gaps = 23/206 (11%) Query: 195 VLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248 VLG +L+L S+ G +++PLL + T+ +P L++ D Sbjct: 35 VLGTILALMRLSSSKLLSNLAGAYVNYFRSIPLLLVITWFYLAVP----FVLRWITGEDT 90 Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308 PV F S +A + AA+ EIVR+G+ ++ +GQM AA ALG+ + Sbjct: 91 PV-------------GAFTSCVVAFMMFEAAYFCEIVRAGVQSISKGQMGAAQALGMNYA 137 Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368 + RL++LPQA R + P L Q + L +++SL VG D ++ + + G++ E ++ Sbjct: 138 QTMRLIILPQAFRKMTPLLLQQSIILFQDTSLVYTVGLVDFLNSARSNGDIIGRSHEFLI 197 Query: 369 IWMFIYLSLSIMIALFMNRLNAKIAL 394 +Y +S + + RL +I++ Sbjct: 198 FAGVVYFLISFSASWLVKRLQKRISV 223 >gi|27379559|ref|NP_771088.1| amino acid ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] gi|27352711|dbj|BAC49713.1| amino acid ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] Length = 506 Score = 79.7 bits (195), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 39/81 (48%), Positives = 56/81 (69%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I ++ +T A+ AE VR GL A+PRGQ EAA ALGL+ K T L++LPQA+R +IP L + Sbjct: 374 IGIALFTGAYQAENVRGGLAAIPRGQGEAAAALGLSWWKTTSLIVLPQALRHVIPNLVNS 433 Query: 331 YLNLLKNSSLAVAVGFADLVS 351 +++L K++SL V DL+ Sbjct: 434 FISLFKDTSLVSIVALFDLLG 454 >gi|330960989|gb|EGH61249.1| amino acid ABC transporter permease [Pseudomonas syringae pv. maculicola str. ES4326] Length = 220 Score = 79.3 bits (194), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 45/129 (34%), Positives = 73/129 (56%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + I L+ + + +AEIVR L A+PRGQ+EA A+GL + R VLLPQAMR I+P Sbjct: 91 FQAGAIGLTLFCGSHVAEIVRGALQAIPRGQIEAGKAIGLRFNQTLRYVLLPQAMRQILP 150 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 + ++K S+L +G A+L+ +I +T +E L F++ ++ I L Sbjct: 151 TWVNSSTEIVKASTLLSVIGVAELLLSTQQVIARTFMTLEFYLFAGFLFFLINYAIKLLG 210 Query: 386 NRLNAKIAL 394 ++ ++AL Sbjct: 211 RQIEKRVAL 219 >gi|294497334|ref|YP_003561034.1| L-cystine import ABC transporter permease TcyB [Bacillus megaterium QM B1551] gi|294347271|gb|ADE67600.1| L-cystine import ABC transporter, permease protein TcyB [Bacillus megaterium QM B1551] Length = 234 Score = 79.3 bits (194), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 53/149 (35%), Positives = 90/149 (60%), Gaps = 14/149 (9%) Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252 +FVLGI+L++ T L+R K + +Y+S +I G P LV + + + + P L Sbjct: 43 TFVLGIILAVL-TALARLSSIKVLNIIARIYVS--IIRGTPLLVQL---FIIFYGLPNLD 96 Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312 T+ P F+S I S A+ +EI+R+ + ++P+GQ EA +LG+T+ +A R Sbjct: 97 -------ITIDP-FISAIIGFSLSVGAYASEIIRAAIQSIPKGQWEAGYSLGMTYSQALR 148 Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341 ++LPQA R IPPL++ +++L+K++SLA Sbjct: 149 RIILPQAARVSIPPLSNSFISLIKDTSLA 177 >gi|302874468|ref|YP_003843101.1| polar amino acid ABC transporter, inner membrane subunit [Clostridium cellulovorans 743B] gi|307690925|ref|ZP_07633371.1| polar amino acid ABC transporter, inner membrane subunit [Clostridium cellulovorans 743B] gi|302577325|gb|ADL51337.1| polar amino acid ABC transporter, inner membrane subunit [Clostridium cellulovorans 743B] Length = 216 Score = 79.3 bits (194), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 42/133 (31%), Positives = 77/133 (57%), Gaps = 1/133 (0%) Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321 +SP F++ I L + A++ EIVRSG+ ++ +GQ EAA ALG T+ + ++LPQ + Sbjct: 84 LSP-FVASMIVLGLNSGAYMTEIVRSGIQSIDKGQFEAAKALGFTYGDTMKKIILPQTFK 142 Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 IIPPL ++++ +LK++SLA + ++++ + N T E L YL L+ + Sbjct: 143 VIIPPLGNEFITILKDTSLASTITLTEVLNNAKKVANSTFSPAEPYLTAAVFYLFLTTIF 202 Query: 382 ALFMNRLNAKIAL 394 ++ K+++ Sbjct: 203 TYVFKKIEKKLSV 215 >gi|33603522|ref|NP_891082.1| glutamate/aspartate transport system permease protein [Bordetella bronchiseptica RB50] gi|33577646|emb|CAE34911.1| glutamate/aspartate transport system permease protein [Bordetella bronchiseptica RB50] Length = 229 Score = 79.3 bits (194), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 49/173 (28%), Positives = 91/173 (52%), Gaps = 1/173 (0%) Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVS-PEFMSLYIALSCYTA 278 PL ++ + GL L LI + + +F P +G + G + F S I + + A Sbjct: 52 PLSAVAAAYVNGLRALPLILVIFWFYFLVPYIGGWLTGAGRPLQVGGFTSALITFTLFEA 111 Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338 A+ EI+R+G+ ++PRGQ AA A+GL + + V+LPQA+R++ P L +Q + L +++ Sbjct: 112 AYFCEIMRAGIQSIPRGQTSAAYAIGLNYWQTMAYVVLPQALRNMAPVLLTQTIVLFQDT 171 Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 SL + D + G + + + +E+ L +Y +S + F++ L + Sbjct: 172 SLVYVLSLTDFLGAGINVAQRDNRLVEMYLFVAAVYFVMSFAASRFVHYLQQR 224 >gi|315037358|ref|YP_004030926.1| glutamine ABC transporter [Lactobacillus amylovorus GRL 1112] gi|325955825|ref|YP_004286435.1| glutamine ABC transporter [Lactobacillus acidophilus 30SC] gi|312275491|gb|ADQ58131.1| putative glutamine ABC transporter [Lactobacillus amylovorus GRL 1112] gi|325332390|gb|ADZ06298.1| glutamine ABC transporter [Lactobacillus acidophilus 30SC] Length = 537 Score = 79.3 bits (194), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 42/116 (36%), Positives = 73/116 (62%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I +S T A++AE++R G+I+ P GQ EAA ALG+TH + ++LPQA+R+ +P +T++ Sbjct: 391 IIVSINTGAYLAEVIRGGIISTPEGQFEAASALGMTHNQRMWHIILPQAIRNCLPSITNE 450 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386 ++ +K++S+ + ++L VG TI +Q+ + L+ IYL L+ I N Sbjct: 451 FIVNIKDTSVLSIISVSELFFVGTTIASQSFKFFPTYLMISAIYLILTFTITRIFN 506 Score = 37.0 bits (84), Expect = 6.2, Method: Compositional matrix adjust. Identities = 29/93 (31%), Positives = 39/93 (41%), Gaps = 10/93 (10%) Query: 67 RAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVG----------A 116 +AG + + T+ Y I+ G T LA G I IG LVG Sbjct: 280 KAGNQTKKENWLVTTWKQYGGMIMSGIGMTLLLALVGTIVGFFIGLLVGIVRTIPTPTTR 339 Query: 117 GRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 G+ A V W+ VYVE+FR P +V +Y Sbjct: 340 GKRWALNFVKWLLSVYVEIFRGTPMMVQAAVIY 372 >gi|300858068|ref|YP_003783051.1| glutamate ABC transporter permease [Corynebacterium pseudotuberculosis FRC41] gi|300685522|gb|ADK28444.1| glutamate ABC transport system permease protein [Corynebacterium pseudotuberculosis FRC41] gi|302330349|gb|ADL20543.1| glutamate transporter permease protein GluD [Corynebacterium pseudotuberculosis 1002] Length = 312 Score = 79.3 bits (194), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 45/123 (36%), Positives = 74/123 (60%), Gaps = 8/123 (6%) Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290 +P L+LI YQ L + + ++ F ++ +L+ Y A IAEI+R+G+ Sbjct: 115 AVPVLLLIIFSYQ------ALAMYKVVPPRELA--FTAVVFSLTMYNGAVIAEILRAGIR 166 Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 A+PRGQ EAA ALGL H + + +LLPQA+ +++P L +Q + LK+S+L +G+ ++V Sbjct: 167 ALPRGQTEAAQALGLGHWQTMQKILLPQAVAAMLPALIAQAVIALKDSALGYQIGYVEIV 226 Query: 351 SVG 353 G Sbjct: 227 RQG 229 Score = 39.7 bits (91), Expect = 0.78, Method: Compositional matrix adjust. Identities = 30/75 (40%), Positives = 45/75 (60%) Query: 78 PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137 P+ ++ T +L G V T AFS +I A I+G L+G GRLS + + WIC E FR Sbjct: 55 PFIDPRTWNTYLLPGLVGTLKSAFSSVILAIILGVLLGLGRLSRRRSLRWICAAITEFFR 114 Query: 138 NIPPLVVIFFLYKSV 152 +P L++I F Y+++ Sbjct: 115 AVPVLLLIIFSYQAL 129 >gi|300812584|ref|ZP_07093001.1| ABC transporter, permease protein [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|300496457|gb|EFK31562.1| ABC transporter, permease protein [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] Length = 500 Score = 79.3 bits (194), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 42/131 (32%), Positives = 76/131 (58%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P + IA+ + A++AE +RSG+ +V +GQ EAA +LGL+ K R V+ PQA+++I Sbjct: 365 PALAAGIIAIGLNSGAYVAEDIRSGINSVAKGQTEAARSLGLSQSKTYRYVVFPQALKNI 424 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 P L ++++ L K+SSL +G +L+ G + T + + + I M IY ++ ++ Sbjct: 425 WPALGNEFITLTKDSSLVSVIGVGELMYETGLVQTATYRGVMPLFITMCIYFVVTFILTR 484 Query: 384 FMNRLNAKIAL 394 +N ++ L Sbjct: 485 LLNYFERRMNL 495 Score = 37.7 bits (86), Expect = 2.8, Method: Compositional matrix adjust. Identities = 28/106 (26%), Positives = 43/106 (40%), Gaps = 1/106 (0%) Query: 44 CVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSG 103 +N NN +K +L ++ A S S YA+ G T + Sbjct: 250 AINKTINNCQKQDL-FNKKYIPAAAKAMKQASSKTNNSMSKYASYFATGLGYTMIITICS 308 Query: 104 MIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 + ++G + RLS NKL+ I Y+E R P +V I F+Y Sbjct: 309 ITIGLVLGVIFALMRLSKNKLLHAIAVCYIEFLRGTPQMVQIMFVY 354 >gi|262404014|ref|ZP_06080569.1| amino acid ABC transporter permease protein [Vibrio sp. RC586] gi|262349046|gb|EEY98184.1| amino acid ABC transporter permease protein [Vibrio sp. RC586] Length = 279 Score = 79.3 bits (194), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 41/112 (36%), Positives = 71/112 (63%), Gaps = 8/112 (7%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I + ++AA++AE++R GL A+P+GQ EAA ALGL++ K L++LPQA++ IP + + Sbjct: 149 IGVVMFSAAYMAEVIRGGLQAIPKGQYEAADALGLSYWKKMGLIILPQALKITIPSIVNT 208 Query: 331 YLNLLKNSSLAVAVGFADLVSVG---GTIINQTGQAIE-----IILIWMFIY 374 ++ L K++SL + +G D++ +G T N G A E ++ W+F + Sbjct: 209 FIGLFKDTSLVLIIGMFDVLGIGQSANTDPNWLGFATESYVFVALVFWVFCF 260 >gi|317054413|ref|YP_004118438.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea sp. At-9b] gi|316952408|gb|ADU71882.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea sp. At-9b] Length = 307 Score = 79.3 bits (194), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 69/234 (29%), Positives = 121/234 (51%), Gaps = 28/234 (11%) Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL----YISTFLIFGLPTLV 236 +T+ A V F G VL+L RLS + P+L + T+ G+P LV Sbjct: 65 MTLQLTAISVVLGFAFGTVLALM--RLSSN---------PVLVAVSWAYTWFFRGVPMLV 113 Query: 237 LIALKY-------QLHFDKPVLGQ-FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288 + L Y ++ P LG+ ++ S VSP F + IAL + +A+ AEIVR+G Sbjct: 114 QLFLWYNIAALYPKIALSIPGLGEIWSAQSNSLVSP-FSAAVIALVMHQSAYAAEIVRAG 172 Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348 + +V GQ+EAA ALG + R +LPQAMR+I+PP ++ + LK +++ + D Sbjct: 173 IQSVGNGQLEAARALGYRPAQIFRHTVLPQAMRAIMPPAGNEIIGQLKTTAVVSVISLQD 232 Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL---FMNRLNAK-IALKEKK 398 ++ I +T + I ++L+ YL ++ ++++ ++ R + + +EK+ Sbjct: 233 VLFSAQIIYQRTYEVIPLLLVATLWYLLMTSVLSVGQYYVERYFGRGVTRREKR 286 >gi|304438666|ref|ZP_07398604.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Selenomonas sp. oral taxon 149 str. 67H29BP] gi|304368315|gb|EFM22002.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Selenomonas sp. oral taxon 149 str. 67H29BP] Length = 214 Score = 79.3 bits (194), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 61/205 (29%), Positives = 109/205 (53%), Gaps = 19/205 (9%) Query: 188 KIFVFSFVLGIVLSLFAT--RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH 245 +IF + L + L LF RLSR F + +L I +++ G P ++ + Y Sbjct: 20 EIFCVTLALSLPLGLFVALGRLSR-FRPLSR----ILEIYIWIMRGTPLMLQLLFVY--- 71 Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305 F P++G + P+ + +A AA+ AEI R+G+ AVPRGQ EAA LG+ Sbjct: 72 FALPMVG--------ILLPDIAAALLAFVLNYAAYFAEIFRAGIQAVPRGQFEAARVLGM 123 Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365 + R ++LPQ +R +PP++++ +NL+K++SL + DL+ V TI+ + Sbjct: 124 SGPLTMRRIILPQVLRITLPPVSNETINLVKDTSLVYILAMNDLLRVARTIVQREFDMTP 183 Query: 366 IILIWMFIYLSLSIMIALFMNRLNA 390 +++ +F YL+++ ++ +L A Sbjct: 184 LLIAGIF-YLAMTAVLTYGFKKLEA 207 >gi|154686658|ref|YP_001421819.1| YqiY [Bacillus amyloliquefaciens FZB42] gi|154352509|gb|ABS74588.1| YqiY [Bacillus amyloliquefaciens FZB42] Length = 219 Score = 79.3 bits (194), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 51/166 (30%), Positives = 86/166 (51%), Gaps = 29/166 (17%) Query: 191 VFSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244 V VLGIVLSLF + F+ + PL+ + FG+P L L +Q+ Sbjct: 31 VIGLVLGIVLSLFKISTISPLKWIADFYTSIFRGTPLVLQLMIIYFGMPQL----LGFQI 86 Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304 +F + ALS +AA+++EI+R+G+ A+ +GQ EAA+ALG Sbjct: 87 D-------------------QFWAAVTALSLNSAAYVSEIIRAGINAIDKGQKEAAVALG 127 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 + + K + +LLPQA ++I P + ++ + L K S++ +G D++ Sbjct: 128 VPYGKMMKDLLLPQAFKNISPAIINELITLTKESAIVTVIGLGDIM 173 >gi|26991114|ref|NP_746539.1| amino acid ABC transporter, permease protein [Pseudomonas putida KT2440] gi|24986152|gb|AAN70003.1|AE016638_11 amino acid ABC transporter, permease protein [Pseudomonas putida KT2440] Length = 218 Score = 79.3 bits (194), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 42/125 (33%), Positives = 78/125 (62%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + + + A ++AE+ RSGL AVPRGQ EA AL ++ A R ++LPQA+R I+PP+ + Sbjct: 94 LGIGLHYACYLAEVYRSGLDAVPRGQWEAVTALNMSPSLAYRNIILPQALRPILPPVGNY 153 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 + +LK++ + A+ +++ I ++T + +E I + +L+LSI++A + R+ A Sbjct: 154 LVAMLKDTPVLSAITVVEIMQQAKNIGSETFRYLEPITMVGVFFLALSIVLAYLVRRVEA 213 Query: 391 KIALK 395 ++ K Sbjct: 214 RLEQK 218 >gi|328956869|ref|YP_004374255.1| glutamine transport system permease protein GlnP [Carnobacterium sp. 17-4] gi|328673193|gb|AEB29239.1| glutamine transport system permease protein GlnP [Carnobacterium sp. 17-4] Length = 216 Score = 79.3 bits (194), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 59/210 (28%), Positives = 102/210 (48%), Gaps = 31/210 (14%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPTLVLIALKYQL 244 VFSF++G +L L F + G + LPLL I F F LP I ++ + Sbjct: 31 VFSFIIGAILGLLRYMKIPVFSKIVGGIVDLIRNLPLLLIIFFTYFALPQ---IGIRLDI 87 Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304 F S A++ + +A ++EI+R+GL +VP GQMEA + G Sbjct: 88 ---------------------FWSAVAAMTIFESAMLSEIMRAGLNSVPSGQMEAGRSTG 126 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ-TGQA 363 LT+ + ++++PQA ++++PP+ SQ ++L+K++SLA + +L I Q T Sbjct: 127 LTYLQTLWIIIIPQAFKAMVPPIVSQLVSLIKDTSLATIISLPELTHNARIIYGQNTTYV 186 Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIA 393 I + + F Y + ++ R K++ Sbjct: 187 IPMFIALAFFYFIICYALSKVAKRFETKLS 216 >gi|327182662|gb|AEA31109.1| glutamine ABC transporter [Lactobacillus amylovorus GRL 1118] Length = 537 Score = 79.3 bits (194), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 42/116 (36%), Positives = 73/116 (62%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I +S T A++AE++R G+I+ P GQ EAA ALG+TH + ++LPQA+R+ +P +T++ Sbjct: 391 IIVSINTGAYLAEVIRGGIISTPEGQFEAASALGMTHNQRMWHIILPQAIRNCLPSITNE 450 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386 ++ +K++S+ + ++L VG TI +Q+ + L+ IYL L+ I N Sbjct: 451 FIVNIKDTSVLSIISVSELFFVGTTIASQSFKFFPTYLMISAIYLILTFTITRIFN 506 Score = 37.0 bits (84), Expect = 6.1, Method: Compositional matrix adjust. Identities = 29/93 (31%), Positives = 39/93 (41%), Gaps = 10/93 (10%) Query: 67 RAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVG----------A 116 +AG + + T+ Y I+ G T LA G I IG LVG Sbjct: 280 KAGNQTKKENWLVTTWKQYGGMIMSGIGMTLLLALVGTIVGFFIGLLVGIVRTIPTPTTR 339 Query: 117 GRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 G+ A V W+ VYVE+FR P +V +Y Sbjct: 340 GKRWALNFVKWLLSVYVEIFRGTPMMVQAAVIY 372 >gi|28379592|ref|NP_786484.1| amino acid ABC transporter, permease protein [Lactobacillus plantarum WCFS1] gi|254557736|ref|YP_003064153.1| amino acid ABC transporter, permease protein [Lactobacillus plantarum JDM1] gi|300769532|ref|ZP_07079418.1| ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|308181822|ref|YP_003925950.1| amino acid ABC transporter, permease protein [Lactobacillus plantarum subsp. plantarum ST-III] gi|28272432|emb|CAD65356.1| amino acid ABC transporter, permease protein [Lactobacillus plantarum WCFS1] gi|254046663|gb|ACT63456.1| amino acid ABC transporter, permease protein [Lactobacillus plantarum JDM1] gi|300492947|gb|EFK28129.1| ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|308047313|gb|ADN99856.1| amino acid ABC transporter, permease protein [Lactobacillus plantarum subsp. plantarum ST-III] Length = 235 Score = 79.3 bits (194), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 50/175 (28%), Positives = 98/175 (56%), Gaps = 4/175 (2%) Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248 I + SF+LG++L++F + + G L L I+ F ++ + L+ + ++F Sbjct: 26 IAIISFILGLILAIFTALV--KISTRRGWFLILKAIANFYVWLFRSTPLLVQLFIVYFGL 83 Query: 249 PVLG-QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307 P L + F G + P + + S T A+ AE +R+ ++++P+GQ EAA ++G+T Sbjct: 84 PYLKIKGLFPNGVQLDP-WTAGIATFSLNTGAYCAETIRAAILSIPQGQWEAAYSIGMTK 142 Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362 + + ++LPQA R +PPL++ +++L+K++SLA ++ ++ V I Q Q Sbjct: 143 SQVLKRIILPQAARVSLPPLSNSFISLVKDTSLAASITIIEMFEVSQQIAAQNYQ 197 >gi|295702707|ref|YP_003595782.1| L-cystine import ABC transporter permease TcyB [Bacillus megaterium DSM 319] gi|294800366|gb|ADF37432.1| L-cystine import ABC transporter, permease protein TcyB [Bacillus megaterium DSM 319] Length = 237 Score = 79.3 bits (194), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 53/149 (35%), Positives = 90/149 (60%), Gaps = 14/149 (9%) Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252 +FVLGI+L++ T L+R K + +Y+S +I G P LV + + + + P L Sbjct: 46 TFVLGIILAVL-TALARLSSIKVLNIIARIYVS--IIRGTPLLVQL---FIIFYGLPNLD 99 Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312 T+ P F+S I S A+ +EI+R+ + ++P+GQ EA +LG+T+ +A R Sbjct: 100 -------ITIDP-FISAVIGFSLSVGAYASEIIRAAIQSIPKGQWEAGYSLGMTYSQALR 151 Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341 ++LPQA R IPPL++ +++L+K++SLA Sbjct: 152 RIILPQAARVSIPPLSNSFISLIKDTSLA 180 >gi|213854563|ref|ZP_03382803.1| glutamine ABC transporter permease protein [Salmonella enterica subsp. enterica serovar Typhi str. M223] Length = 147 Score = 79.3 bits (194), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 41/129 (31%), Positives = 79/129 (61%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + + + + A+IAEI R ++++ +G EA +ALGL+ R+ R V+LP A+R ++P Sbjct: 18 FSAAVVTIMINSGAYIAEITRGAVLSIHKGFREAGLALGLSRRETIRHVILPLALRRMLP 77 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PL +Q++ +K++SL + +G A+L G II +A+EI YL ++++++ + Sbjct: 78 PLGNQWIISIKDTSLFIVIGVAELTRQGQEIIAGNFRALEIWSAVAVFYLIITLVLSFIL 137 Query: 386 NRLNAKIAL 394 RL ++ + Sbjct: 138 RRLERRMKI 146 >gi|163941903|ref|YP_001646787.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus weihenstephanensis KBAB4] gi|163864100|gb|ABY45159.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus weihenstephanensis KBAB4] Length = 219 Score = 79.3 bits (194), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 40/129 (31%), Positives = 78/129 (60%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P F++ +A S + A+++E++R+G+ AV +GQ EAA+ALG+ + K R ++ PQA+++I Sbjct: 87 PAFLAAVLAFSLNSGAYMSEVIRAGIQAVDKGQTEAAMALGIPYSKMMRNIIFPQALKNI 146 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 +P L +++ L K S++ +G DL+ + +T + +E +L IY L I++ L Sbjct: 147 LPALVNEFATLTKESAVVTVIGATDLMRRAYIVGGETFKYLEPLLFVGLIYYILVIILTL 206 Query: 384 FMNRLNAKI 392 + ++ Sbjct: 207 VGKTIEGRM 215 >gi|241204561|ref|YP_002975657.1| polar amino acid ABC transcriptional regulator inner membrane protein [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240858451|gb|ACS56118.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 225 Score = 79.3 bits (194), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 47/117 (40%), Positives = 71/117 (60%), Gaps = 8/117 (6%) Query: 237 LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296 L+A Y L+F P LG + PE + +ALS + A+IAEI+R+G++++ RGQ Sbjct: 69 LLAQLYFLYFGLPRLG--------FILPELVVGILALSLNSGAYIAEIIRAGILSIHRGQ 120 Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353 +EA IA G+T + R V+LPQA + IPPL Q + L+K+S+L + A+L G Sbjct: 121 VEAGIASGMTFIQRMRFVILPQAFKVTIPPLLGQAIVLVKDSALLSLISVAELTRAG 177 >gi|104774800|ref|YP_619780.1| glutamine ABC transporter, substrate binding / permease protein [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|103423881|emb|CAI98922.1| Glutamine ABC transporter, substrate binding / permease protein [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] Length = 486 Score = 79.3 bits (194), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 68/258 (26%), Positives = 117/258 (45%), Gaps = 34/258 (13%) Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI--FVFSFVLGIVL 200 +V + K V+ + D SI+ G+ +N G L M I + + V G++L Sbjct: 253 IVNKYTSKKVVKSQVVADTSIL---GLIKDNAGALLQGLWMTIELSIVGILAALVFGLIL 309 Query: 201 SLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQF 254 + + +H + +P++ ++ F+ G+PTL L ++L Sbjct: 310 GIMGIAEHKFWHGLANVIIYIFRGIPMMVLAFFIYIGMPTL----LGHKL---------- 355 Query: 255 NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLV 314 P F + + L A+I IVR G +V GQ EAA +LGL + KA V Sbjct: 356 ---------PLFTAGILTLMLDEGAYIGAIVRGGFESVDVGQWEAARSLGLPYYKALWKV 406 Query: 315 LLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374 + PQ + +IP L +Q++ LK++S+ A+G DL G +I Q Q ++ LI +Y Sbjct: 407 VAPQGFKLMIPSLVNQFIITLKDTSILSAIGVMDLTQTGANLIAQNFQGFKMWLIIAVMY 466 Query: 375 LSLSIMIALFMNRLNAKI 392 L + ++ N + K+ Sbjct: 467 LIIITLLTWLSNYIQKKM 484 >gi|296877227|ref|ZP_06901267.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus parasanguinis ATCC 15912] gi|296431747|gb|EFH17554.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus parasanguinis ATCC 15912] Length = 230 Score = 79.3 bits (194), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 55/199 (27%), Positives = 100/199 (50%), Gaps = 29/199 (14%) Query: 212 HEKTGKALPLLYIST----------FLIF-GLPTLVLIALKYQLHFDKPVLGQFNFIGGS 260 +K G L Y+ T FL+F GLP L + L D +F F+ Sbjct: 48 EDKVGAGLAKGYVFTLRCTPPIVLLFLVFYGLPQF----LNWWLGIDIDHWSKFVFV--- 100 Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320 +A+ AA I+E+ ++ +A+P+GQMEA +++GLT + ++LPQA Sbjct: 101 ---------LVAMFLLFAAMISEVFKAAYLAIPKGQMEAGLSIGLTPAQTIWRIVLPQAF 151 Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII--NQTGQAIEIILIWMFIYLSLS 378 R +P +T+ LNL+++++LA +GF D++ G +I N ++E IY ++ Sbjct: 152 RVALPNMTTAILNLMRDAALAYTIGFIDIMGAGNNLISRNLGNYSLETYTAVAVIYWGIA 211 Query: 379 IMIALFMNRLNAKIALKEK 397 ++I+ L ++++ E+ Sbjct: 212 LVISFSAQLLEKRLSVTER 230 >gi|289673930|ref|ZP_06494820.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. syringae FF5] Length = 166 Score = 79.3 bits (194), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 44/129 (34%), Positives = 74/129 (57%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + I L+ + + ++EIVR L A+PRGQ+EA A+GL ++ R VLLPQAMR I+P Sbjct: 37 FQAGAIGLTLFCGSHVSEIVRGALQAIPRGQLEAGKAIGLRFNQSLRYVLLPQAMRQILP 96 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 + ++K S+L +G A+L+ +I +T +E L F++ ++ I L Sbjct: 97 TWVNSSTEIVKASTLLSVIGVAELLLSTQQVIARTFMTLEFYLFAGFLFFLINYAIELLG 156 Query: 386 NRLNAKIAL 394 ++ ++AL Sbjct: 157 RQIEKRVAL 165 >gi|262050150|ref|ZP_06023004.1| hypothetical protein SAD30_1114 [Staphylococcus aureus D30] gi|262052687|ref|ZP_06024879.1| hypothetical protein SA930_0823 [Staphylococcus aureus 930918-3] gi|259159436|gb|EEW44488.1| hypothetical protein SA930_0823 [Staphylococcus aureus 930918-3] gi|259161775|gb|EEW46363.1| hypothetical protein SAD30_1114 [Staphylococcus aureus D30] Length = 441 Score = 79.3 bits (194), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 34/80 (42%), Positives = 61/80 (76%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IAL ++A+IAEI+R+G+ AV +GQMEAA +LGL +R+ + V++PQA+++I+P L ++ Sbjct: 316 IALVINSSAYIAEIIRAGINAVDKGQMEAARSLGLNYRQTMKSVIMPQAIKNILPALGNE 375 Query: 331 YLNLLKNSSLAVAVGFADLV 350 ++ L+K SS+ +G +++ Sbjct: 376 FVTLIKESSIVSTIGVGEIM 395 Score = 44.3 bits (103), Expect = 0.035, Method: Compositional matrix adjust. Identities = 21/67 (31%), Positives = 37/67 (55%) Query: 83 SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142 S Y + L G T ++ G+ +I+G V +LS K+++WI +Y+E+ R P L Sbjct: 231 SKYGSFFLKGIKITILISLIGVALGSILGAFVALMKLSKIKIISWIASIYIEILRGTPML 290 Query: 143 VVIFFLY 149 V +F ++ Sbjct: 291 VQVFIVF 297 >gi|254469494|ref|ZP_05082899.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Pseudovibrio sp. JE062] gi|211961329|gb|EEA96524.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Pseudovibrio sp. JE062] Length = 372 Score = 79.3 bits (194), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 57/186 (30%), Positives = 105/186 (56%), Gaps = 18/186 (9%) Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240 LTM FS +GIVL+L SR + K+L +++I I G+P + L+ + Sbjct: 168 LTMIIGVSGISFSLPIGIVLAL-----SRSSNLPIVKSLAVIFIE--FIRGVPLITLLFV 220 Query: 241 KYQL-HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299 + L ++ P F+ + + + I ++ + +A++AE++R GL A+P+GQ EA Sbjct: 221 AHVLLNYFLPKGVNFDIV---------LRVVIMVTLFASAYMAEVIRGGLAALPKGQYEA 271 Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS-VGGTIIN 358 A ALGL++ ++ RL++LPQA++ IP + + ++ L K+++L + +G D + V T+ + Sbjct: 272 ADALGLSYWQSMRLIILPQALKISIPGIVNTFIGLFKDTTLVLIIGLMDPLGLVAPTLAD 331 Query: 359 QTGQAI 364 Q I Sbjct: 332 QRWNGI 337 >gi|251799196|ref|YP_003013927.1| polar amino acid ABC transporter inner membrane protein [Paenibacillus sp. JDR-2] gi|247546822|gb|ACT03841.1| polar amino acid ABC transporter, inner membrane subunit [Paenibacillus sp. JDR-2] Length = 236 Score = 79.3 bits (194), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 63/209 (30%), Positives = 104/209 (49%), Gaps = 15/209 (7%) Query: 194 FVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL-- 251 FV+G++ T L+R + L Y++ I G P L + L Y F P+L Sbjct: 34 FVIGVI-----TALARIYRIPVLSQLSSGYVT--FIRGTPMLTHLLLIY---FGLPMLVD 83 Query: 252 ---GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308 QF+ S P YI+ S A+++E+VRSGL+AV RGQMEAA ++G+T Sbjct: 84 GLSAQFDLGWNSAKIPMIGFAYISFSITAGAYLSEVVRSGLLAVDRGQMEAARSIGMTTP 143 Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368 +A R ++ PQA+ + +P L++ + +L S+LA V DL + + + + E + Sbjct: 144 QALRRIVFPQALAASLPNLSNSVIGMLHGSTLAFTVSVVDLNAKAQIVASTNWKFFESYV 203 Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKEK 397 I+ L+I+I + +I + K Sbjct: 204 AAALIFWGLTILIERCTGLIERRIRVYSK 232 >gi|153012083|ref|YP_001373294.1| polar amino acid ABC transporter, inner membrane subunit [Ochrobactrum anthropi ATCC 49188] gi|151563971|gb|ABS17465.1| polar amino acid ABC transporter, inner membrane subunit [Ochrobactrum anthropi ATCC 49188] Length = 307 Score = 79.3 bits (194), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 43/128 (33%), Positives = 75/128 (58%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + L A+++EI+RSGL++V GQ +AA +LG+T+ KA ++LPQAM IIPP +Q Sbjct: 162 LGLGLNEGAYMSEIIRSGLMSVEPGQKQAAKSLGMTNGKALWRIILPQAMPVIIPPTGNQ 221 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 + +LK SSL + ADL+ TI ++ Q I ++++ YL+ + +++ R+ Sbjct: 222 TIGMLKTSSLVSVISLADLLYSAQTIYSRNFQTIPLLIVACIWYLAATTILSAAQVRIER 281 Query: 391 KIALKEKK 398 ++ Sbjct: 282 HFGRSNQQ 289 Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust. Identities = 41/136 (30%), Positives = 58/136 (42%), Gaps = 24/136 (17%) Query: 32 ILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILV 91 I A LL + L+CV M +N + G + E Y DS IL Sbjct: 30 IAATLLIIFILYCVK-----MIAANPNFGWNVVGE------------YLFDSR----ILW 68 Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151 G T WL M ++GT++ +S N +++ + Y+ FR P LV + F Y Sbjct: 69 GLYLTLWLTVVTMAIGVVLGTILAIMAMSNNIVISNVANAYIWFFRGTPVLVQLIFWYN- 127 Query: 152 VLSVLPIPDHSIVLPF 167 L L P+ SI LPF Sbjct: 128 -LGAL-FPEMSIGLPF 141 >gi|296103260|ref|YP_003613406.1| glutamine ABC transporter permease protein [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295057719|gb|ADF62457.1| glutamine ABC transporter permease protein [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 219 Score = 79.3 bits (194), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 41/129 (31%), Positives = 80/129 (62%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + + + + A+IAEI R ++++ +G EA +ALGL+ R+ R V+LP A+R ++P Sbjct: 90 FSAAVVTIMINSGAYIAEITRGAVLSIHKGFSEAGLALGLSRRETIRHVILPLALRRMLP 149 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PL +Q++ +K++SL + +G A+L G II +A+EI +YL ++++++ + Sbjct: 150 PLGNQWIISIKDTSLFIVIGVAELTRQGQEIIAGNFRALEIWSAVAVVYLIITLVLSFVL 209 Query: 386 NRLNAKIAL 394 RL ++ + Sbjct: 210 RRLERRMKI 218 >gi|33591319|ref|NP_878963.1| glutamate/aspartate transport system permease protein [Bordetella pertussis Tohama I] gi|33570961|emb|CAE40433.1| glutamate/aspartate transport system permease protein [Bordetella pertussis Tohama I] Length = 229 Score = 79.3 bits (194), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 49/173 (28%), Positives = 91/173 (52%), Gaps = 1/173 (0%) Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVS-PEFMSLYIALSCYTA 278 PL ++ + GL L LI + + +F P +G + G + F S I + + A Sbjct: 52 PLSAVAAAYVNGLRALPLILVIFWFYFLVPYIGGWLTGAGRPLQVGGFTSALITFTLFEA 111 Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338 A+ EI+R+G+ ++PRGQ AA A+GL + + V+LPQA+R++ P L +Q + L +++ Sbjct: 112 AYFCEIMRAGIQSIPRGQTSAAYAIGLNYWQTMAYVVLPQALRNMAPVLLTQTIVLFQDT 171 Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 SL + D + G + + + +E+ L +Y +S + F++ L + Sbjct: 172 SLVYVLSLTDFLGAGINVAQRDNRLVEMYLFVAAVYFVMSFAASRFVHYLQQR 224 >gi|253575107|ref|ZP_04852446.1| polar amino acid ABC transporter [Paenibacillus sp. oral taxon 786 str. D14] gi|251845563|gb|EES73572.1| polar amino acid ABC transporter [Paenibacillus sp. oral taxon 786 str. D14] Length = 236 Score = 79.3 bits (194), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 71/230 (30%), Positives = 114/230 (49%), Gaps = 24/230 (10%) Query: 177 SFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL-YISTF---LIFGL 232 + PT M T + V FV+G++ +LF RL R +P+L IST I G Sbjct: 18 AIPTTLMITAVSVSV-GFVIGVITALF--RLYR---------VPVLGQISTAYVTFIRGT 65 Query: 233 PTLVLIALKYQLHFDKPVL-----GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287 P L + L Y F PV+ F + S P YI+ S A+++E+VRS Sbjct: 66 PMLTHLLLIY---FGLPVIIDGLSEGFGWGFKSASIPMIAFAYISFSITAGAYMSEVVRS 122 Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347 GL+AV RGQ+EAA ++G+T +A R ++ PQA+ +P L++ + +L S+LA V Sbjct: 123 GLLAVNRGQLEAAYSIGMTTFQALRRIVFPQALAFSLPNLSNSAIGMLHGSTLAFTVSVV 182 Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 D+ + + + + E + I+ L+++I RL +I L + Sbjct: 183 DINAKAQIVASTNWKFFEAYVAAALIFWGLTVLIERLTARLEKRIQLYNR 232 >gi|239813181|ref|YP_002942091.1| polar amino acid ABC transporter inner membrane protein [Variovorax paradoxus S110] gi|239799758|gb|ACS16825.1| polar amino acid ABC transporter, inner membrane subunit [Variovorax paradoxus S110] Length = 222 Score = 79.3 bits (194), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 41/129 (31%), Positives = 77/129 (59%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P F+ + L Y+ A+++EIVR + ++ +GQ AA +LG+T A R ++LPQA+ + Sbjct: 87 PAFLCGVLGLGVYSGAYVSEIVRGAIQSIDKGQTMAAQSLGMTPGTAMREIVLPQAVVRM 146 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 IPPL ++++ L+KNS+L + D++ G II+ + +++E+ L +Y L+ + L Sbjct: 147 IPPLGNEFIALIKNSALVSLLTIHDVMHEGQKIISVSYRSLEVYLAIALVYFVLTGTMTL 206 Query: 384 FMNRLNAKI 392 + K+ Sbjct: 207 VLRHFEQKL 215 >gi|308186011|ref|YP_003930142.1| ABC transport system, permease protein [Pantoea vagans C9-1] gi|308056521|gb|ADO08693.1| putative ABC transport system, permease protein [Pantoea vagans C9-1] Length = 315 Score = 79.3 bits (194), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 39/104 (37%), Positives = 68/104 (65%) Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 L+ AA++AEI+R+GL++V GQ+E A G++ +A R +++PQAMRSIIPP +Q Sbjct: 167 GLALNEAAYMAEIIRAGLLSVDNGQVETTQAFGMSRSRALRRIIIPQAMRSIIPPTGNQL 226 Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375 ++++K +SL + DL+ I N+T + I ++++ + YL Sbjct: 227 ISMIKATSLVSVIAMGDLLYSVQAIYNRTFEIIPMLMVAVIWYL 270 >gi|262165599|ref|ZP_06033336.1| amino acid ABC transporter permease protein [Vibrio mimicus VM223] gi|262025315|gb|EEY43983.1| amino acid ABC transporter permease protein [Vibrio mimicus VM223] Length = 365 Score = 79.3 bits (194), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 41/112 (36%), Positives = 71/112 (63%), Gaps = 8/112 (7%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I + ++AA++AE++R GL A+P+GQ EAA ALGL++ K L++LPQA++ IP + + Sbjct: 235 IGVVMFSAAYMAEVIRGGLQAIPKGQYEAADALGLSYWKKMGLIILPQALKITIPSIVNT 294 Query: 331 YLNLLKNSSLAVAVGFADLVSVG---GTIINQTGQAIE-----IILIWMFIY 374 ++ L K++SL + +G D++ +G T N G A E ++ W+F + Sbjct: 295 FIGLFKDTSLVLIIGMFDVLGIGQSANTDPNWLGFATESYVFVALVFWIFCF 346 >gi|260774979|ref|ZP_05883879.1| amino acid ABC transporter permease protein [Vibrio coralliilyticus ATCC BAA-450] gi|260609069|gb|EEX35228.1| amino acid ABC transporter permease protein [Vibrio coralliilyticus ATCC BAA-450] Length = 223 Score = 79.3 bits (194), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 57/170 (33%), Positives = 97/170 (57%), Gaps = 15/170 (8%) Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALK 241 TM+ VFS +L ++L+ R F L LYIS F G P LV + L Sbjct: 22 TMEMATWGLVFSLILAVILANI-----RVFRVPVLDQLSQLYISFFR--GTPLLVQLFL- 73 Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301 L++ P + F F+ G F + I L+ + AA++AE +R+ +I + R QMEA++ Sbjct: 74 --LYYGLPQI--FPFLVGLDA---FSAAVIGLTLHFAAYMAESIRAAIIGIDRSQMEASL 126 Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 ++G+T +A R V+LPQA R +P L + +++++K++SLA +G A++++ Sbjct: 127 SVGMTTTQAMRRVILPQATRVALPSLMNYFIDMIKSTSLAFTLGVAEIMA 176 >gi|227529453|ref|ZP_03959502.1| amino acid ABC superfamily ATP binding cassette transporter, amino acid-binding/permease protein [Lactobacillus vaginalis ATCC 49540] gi|227350538|gb|EEJ40829.1| amino acid ABC superfamily ATP binding cassette transporter, amino acid-binding/permease protein [Lactobacillus vaginalis ATCC 49540] Length = 204 Score = 79.3 bits (194), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 45/128 (35%), Positives = 81/128 (63%), Gaps = 4/128 (3%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 +F++ +AL+ Y+ A+IAEI+RSG+ ++P GQ EAA +LG+ + ++LPQA ++I+ Sbjct: 73 DFVTGIVALTLYSGAYIAEIIRSGIQSLPVGQTEAAESLGIPSYRILLNIILPQAFKNIL 132 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI----WMFIYLSLSIM 380 P L +Q + +K+SSL +G D++ T+ T +E ++I ++ I L L+ + Sbjct: 133 PALGNQLIGNVKDSSLVSVLGITDIMFAAQTVRGSTALGLEPMIIASALYLVICLILNQI 192 Query: 381 IALFMNRL 388 +ALF R+ Sbjct: 193 LALFERRM 200 >gi|65317794|ref|ZP_00390753.1| COG0765: ABC-type amino acid transport system, permease component [Bacillus anthracis str. A2012] Length = 233 Score = 79.3 bits (194), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 74/223 (33%), Positives = 116/223 (52%), Gaps = 19/223 (8%) Query: 177 SFPTLTMDT--NAKIFVFSFVLGIVLSL-FATRLSRHFHEKTGKALPLLYISTFLIFGLP 233 ++PTL T ++ + S VLG ++ L FA R + K ++ +YI+ +I G P Sbjct: 11 TYPTLLKATIVTLQLTLTSLVLGSLIGLLFA--FFRISNNKVLNSIAHVYIA--IIRGTP 66 Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293 +V IA+ Y F +P F + IAL+ + A+I EI R + +V Sbjct: 67 LIVQIAILY-----------FGITSVVVFTP-FWAGAIALAIHNGAYITEIFRGSIQSVD 114 Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353 RGQMEAA +LG+ + A R ++LPQA R +PPL +Q++ LK+SSL VG A+L G Sbjct: 115 RGQMEAARSLGMPYPLAMRRIVLPQAFRQSLPPLGNQFIIGLKDSSLVAYVGMAELWGSG 174 Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 +I Q ++ +I YL L ++ +N L ++ KE Sbjct: 175 LSIAAGNFQQLDTYIIVGLYYLVLVLLFTYLVNLLEKRLQRKE 217 Score = 36.2 bits (82), Expect = 9.2, Method: Compositional matrix adjust. Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 1/74 (1%) Query: 83 SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142 S+Y T +L + T L + ++ ++IG L R+S NK++ I VY+ + R P + Sbjct: 10 STYPT-LLKATIVTLQLTLTSLVLGSLIGLLFAFFRISNNKVLNSIAHVYIAIIRGTPLI 68 Query: 143 VVIFFLYKSVLSVL 156 V I LY + SV+ Sbjct: 69 VQIAILYFGITSVV 82 >gi|291004254|ref|ZP_06562227.1| amino acid ABC transporter, permease protein [Saccharopolyspora erythraea NRRL 2338] Length = 216 Score = 79.3 bits (194), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 45/110 (40%), Positives = 71/110 (64%), Gaps = 5/110 (4%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P F + IAL+ YT+AF+ E++RSG+ VP GQ EAA ++GL ++ V+LPQA R++ Sbjct: 84 PFFTAAVIALTVYTSAFVCEVLRSGINTVPVGQAEAARSIGLGFAQSLTNVILPQAFRAV 143 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI--INQTGQAIEIILIWM 371 +PP+ S + LLKN++ VA GF+ + VG I +N+ G+ +W+ Sbjct: 144 VPPMVSVLIALLKNTT--VAAGFS-VNEVGSVIPFLNEEGEPTINAFVWI 190 >gi|258627558|ref|ZP_05722335.1| amino acid ABC transporter, permease protein [Vibrio mimicus VM603] gi|258580140|gb|EEW05112.1| amino acid ABC transporter, permease protein [Vibrio mimicus VM603] Length = 365 Score = 79.3 bits (194), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 41/112 (36%), Positives = 71/112 (63%), Gaps = 8/112 (7%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I + ++AA++AE++R GL A+P+GQ EAA ALGL++ K L++LPQA++ IP + + Sbjct: 235 IGVVMFSAAYMAEVIRGGLQAIPKGQYEAADALGLSYWKKMGLIILPQALKITIPSIVNT 294 Query: 331 YLNLLKNSSLAVAVGFADLVSVG---GTIINQTGQAIE-----IILIWMFIY 374 ++ L K++SL + +G D++ +G T N G A E ++ W+F + Sbjct: 295 FIGLFKDTSLVLIIGMFDVLGIGQSANTDPNWLGFATESYVFVALVFWIFCF 346 >gi|227530173|ref|ZP_03960222.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus vaginalis ATCC 49540] gi|227349926|gb|EEJ40217.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus vaginalis ATCC 49540] Length = 217 Score = 79.3 bits (194), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 60/204 (29%), Positives = 103/204 (50%), Gaps = 36/204 (17%) Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPT 234 +T++ + + SF++G +L + ++ G + LPLL I F FGLP Sbjct: 22 ITIEISVASIICSFIIGTLLGIIRYAKIKYVSAIVGFIIDLIRNLPLLLIIFFTYFGLPN 81 Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYI-ALSCYTAAFIAEIVRSGLIAVP 293 + V PE + I AL+ + ++ +AEIVRSG+ ++ Sbjct: 82 I-------------------------GVKPEIIPAAIMALTVFESSMVAEIVRSGINSID 116 Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353 Q E A+A GLT +A RL++LPQA+++++P L SQ+++L+K++SLA + +L+ Sbjct: 117 YAQTEGALANGLTKWQALRLIVLPQAIKNMLPALVSQFISLVKDTSLATIIVLPELMYHA 176 Query: 354 GTIINQTGQAIEIILIWMFIYLSL 377 I Q I I MF+ L++ Sbjct: 177 QIIYGQNTNYI----IPMFVALAV 196 Score = 36.6 bits (83), Expect = 6.7, Method: Compositional matrix adjust. Identities = 22/61 (36%), Positives = 37/61 (60%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G T ++ + +I + IIGTL+G R + K V+ I +++ RN+P L++IFF Sbjct: 16 LLQGLGITIEISVASIICSFIIGTLLGIIRYAKIKYVSAIVGFIIDLIRNLPLLLIIFFT 75 Query: 149 Y 149 Y Sbjct: 76 Y 76 >gi|42783270|ref|NP_980517.1| amino acid ABC transporter, permease protein [Bacillus cereus ATCC 10987] gi|206976334|ref|ZP_03237242.1| amino acid ABC transporter, permease protein [Bacillus cereus H3081.97] gi|217961644|ref|YP_002340214.1| amino acid ABC transporter, permease protein [Bacillus cereus AH187] gi|222097601|ref|YP_002531658.1| amino acid ABC transporter , permease protein [Bacillus cereus Q1] gi|42739198|gb|AAS43125.1| amino acid ABC transporter, permease protein [Bacillus cereus ATCC 10987] gi|206745530|gb|EDZ56929.1| amino acid ABC transporter, permease protein [Bacillus cereus H3081.97] gi|217066079|gb|ACJ80329.1| amino acid ABC transporter, permease protein [Bacillus cereus AH187] gi|221241659|gb|ACM14369.1| amino acid ABC transporter, permease protein [Bacillus cereus Q1] Length = 219 Score = 79.3 bits (194), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 40/129 (31%), Positives = 78/129 (60%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P F++ +A S + A+++E++R+G+ AV +GQ EAA+ALG+ + K R ++ PQA+++I Sbjct: 87 PAFLAAVLAFSLNSGAYMSEVIRAGIQAVDKGQTEAAMALGIPYGKMMRNIIFPQALKNI 146 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 +P L +++ L K S++ +G DL+ + +T + +E +L IY L I++ L Sbjct: 147 LPALVNEFATLTKESAVVTVIGATDLMRRAYIVGGETFKYLEPLLFVGLIYYMLVIILTL 206 Query: 384 FMNRLNAKI 392 + ++ Sbjct: 207 VGKAIEGRM 215 >gi|328958175|ref|YP_004375561.1| putative ABC transporter [Carnobacterium sp. 17-4] gi|328674499|gb|AEB30545.1| putative ABC transporter [Carnobacterium sp. 17-4] Length = 226 Score = 79.3 bits (194), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 63/205 (30%), Positives = 105/205 (51%), Gaps = 20/205 (9%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 +F +LG +L++ R+S K + YIS + G PTLV + + L+F P Sbjct: 38 IFGTILGFLLAI--MRMST---SKIVSMIARTYIS--FMRGTPTLVFL---FILYFGFPF 87 Query: 251 LG-QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309 +G QF + + I S +AA+ AEI+RS L +V GQ EAA ALGL Sbjct: 88 IGIQFKAVNAAI---------IGFSLSSAAYSAEIIRSSLHSVDHGQWEAAYALGLKWSF 138 Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369 R V++PQAMR IPP+++ +L+L+K +SLA + ++ + + + + ++ Sbjct: 139 IMRKVIIPQAMRIAIPPMSNVFLDLIKGTSLAAMITVPEIFQQAKIVGGREFDYMTMYIL 198 Query: 370 WMFIYLSLSIMIALFMNRLNAKIAL 394 IY ++ + +F N L + +L Sbjct: 199 VALIYWAICSVFTIFQNYLEKRTSL 223 Score = 42.0 bits (97), Expect = 0.18, Method: Compositional matrix adjust. Identities = 24/61 (39%), Positives = 34/61 (55%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 IL G T ++ MI TI+G L+ R+S +K+V+ I R Y+ R P LV +F L Sbjct: 22 ILKGLGYTLGISMVSMIFGTILGFLLAIMRMSTSKIVSMIARTYISFMRGTPTLVFLFIL 81 Query: 149 Y 149 Y Sbjct: 82 Y 82 >gi|149375978|ref|ZP_01893744.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Marinobacter algicola DG893] gi|149359615|gb|EDM48073.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Marinobacter algicola DG893] Length = 223 Score = 79.3 bits (194), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 55/205 (26%), Positives = 100/205 (48%), Gaps = 29/205 (14%) Query: 193 SFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246 FVLGI+ L + R + + + P+L F+ +GLP LV Sbjct: 37 GFVLGIIFGLLSINKKWFLRWPATAYIEIFRGTPILVQVLFIFYGLPDLV---------- 86 Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306 G + P + A++ + A+I+E+VR G+ ++ +GQ EA ++LGL+ Sbjct: 87 ------------GGPIDP-LTAGIAAIALNSGAYISEVVRGGVQSIDKGQTEAGLSLGLS 133 Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 + V+ PQA R +IPPL +Q + +K++SL +G +LV G I T A E+ Sbjct: 134 RSQTFWSVVWPQAFRRMIPPLGNQAIVSIKDTSLFSVIGVGELVRQGQVYIANTFTAFEV 193 Query: 367 ILIWMFIYLSLSIMIALFMNRLNAK 391 + +YL++++ ++L + + + Sbjct: 194 YFVVAIMYLAITLSLSLVLRLIERR 218 >gi|89098934|ref|ZP_01171814.1| amino acid ABC transproter, permease [Bacillus sp. NRRL B-14911] gi|89086338|gb|EAR65459.1| amino acid ABC transproter, permease [Bacillus sp. NRRL B-14911] Length = 215 Score = 79.3 bits (194), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 42/132 (31%), Positives = 81/132 (61%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 +F+++ + L+ + A+IAEI R + ++ +GQMEA +LG++ A R ++LPQA+R + Sbjct: 84 QFLAVVLGLAFHNGAYIAEIFRGSIQSIEKGQMEAGRSLGMSAGLAMRRIILPQAVRRAL 143 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 PPL +Q++ LK+SSLA +G +L +V T + + +LI YL L ++ + Sbjct: 144 PPLGNQFIIALKDSSLASFIGMYELFNVATTYGSNEYDYMSYLLIVAVYYLILVLVFSFL 203 Query: 385 MNRLNAKIALKE 396 ++ + ++A+ + Sbjct: 204 VSIIEKRMAISD 215 >gi|326797353|ref|YP_004315173.1| polar amino acid ABC transporter inner membrane subunit [Marinomonas mediterranea MMB-1] gi|326548117|gb|ADZ93337.1| polar amino acid ABC transporter, inner membrane subunit [Marinomonas mediterranea MMB-1] Length = 366 Score = 79.3 bits (194), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 42/137 (30%), Positives = 79/137 (57%), Gaps = 3/137 (2%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 + + + I ++ ++AA++AE++R GL A+P+GQ EAA A+GLT+ ++ LV+LPQA++ +I Sbjct: 229 KLLRVLIGITLFSAAYMAEVIRGGLQAIPKGQYEAADAMGLTYWQSMCLVILPQALKLVI 288 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADL---VSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 P + + ++ L K+++L VG DL + N G IE F+Y + + Sbjct: 289 PGIVNTFIGLFKDTTLVYIVGMFDLLGRIQAANHDANWLGTTIEGYAFAGFVYWIICFGM 348 Query: 382 ALFMNRLNAKIALKEKK 398 + + + K+ K+ Sbjct: 349 SRYSMAVERKLDTGHKR 365 >gi|291521639|emb|CBK79932.1| amino acid ABC transporter membrane protein, PAAT family (TC 3.A.1.3.-) [Coprococcus catus GD/7] Length = 216 Score = 79.3 bits (194), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 42/139 (30%), Positives = 82/139 (58%), Gaps = 3/139 (2%) Query: 256 FIGGSTVSPEF--MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313 FI G ++P + ++ I + AA+ AEI RSG+ A+P GQ EAA LG + + Sbjct: 75 FIFGMQITPSYRLKAVLIGFALNYAAYFAEIYRSGIAAIPVGQYEAARMLGYSKTQTFAY 134 Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI 373 +++PQ ++ IIPP+ ++ + L+K++SLA + A++ +V ++ + I+ +F Sbjct: 135 IVMPQVIKRIIPPVANETITLVKDTSLAFTLAVAEVFTVTKQLVASQSSVVPFIVAGIFY 194 Query: 374 YLSLSIMIALFMNRLNAKI 392 Y+ ++++A+F + L K+ Sbjct: 195 YI-FNLIVAVFFDYLEKKM 212 >gi|317047287|ref|YP_004114935.1| polar amino acid ABC transporter inner membrane subunit [Pantoea sp. At-9b] gi|316948904|gb|ADU68379.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea sp. At-9b] Length = 319 Score = 79.3 bits (194), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 38/104 (36%), Positives = 68/104 (65%) Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 L+ AA++AEI+R+GL++V GQ+E A G++ +A R +++PQAMRSIIPP +Q Sbjct: 168 GLALNEAAYMAEIIRAGLLSVDNGQVETTQAFGMSRTRALRRIIIPQAMRSIIPPTGNQL 227 Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375 ++++K +SL + DL+ + N+T + I ++++ + YL Sbjct: 228 ISMIKATSLVSVIAMGDLLYSVQAVYNRTFEIIPMLMVAVIWYL 271 >gi|196042407|ref|ZP_03109669.1| amino acid ABC transporter, permease protein [Bacillus cereus NVH0597-99] gi|196026753|gb|EDX65398.1| amino acid ABC transporter, permease protein [Bacillus cereus NVH0597-99] Length = 219 Score = 79.3 bits (194), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 40/129 (31%), Positives = 78/129 (60%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P F++ +A S + A+++E++R+G+ AV +GQ EAA+ALG+ + K R ++ PQA+++I Sbjct: 87 PAFLAAVLAFSLNSGAYMSEVIRAGIQAVDKGQTEAAMALGIPYGKMMRNIIFPQALKNI 146 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 +P L +++ L K S++ +G DL+ + +T + +E +L IY L I++ L Sbjct: 147 LPALVNEFATLTKESAVVTVIGATDLMRRAYIVGGETFKYLEPLLFVGLIYYMLVIILTL 206 Query: 384 FMNRLNAKI 392 + ++ Sbjct: 207 VGKAIEGRM 215 >gi|320143581|gb|EFW35361.1| ABC transporter, permease protein [Staphylococcus aureus subsp. aureus MRSA177] Length = 467 Score = 79.3 bits (194), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 34/80 (42%), Positives = 61/80 (76%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IAL ++A+IAEI+R+G+ AV +GQMEAA +LGL +R+ + V++PQA+++I+P L ++ Sbjct: 342 IALVINSSAYIAEIIRAGINAVDKGQMEAARSLGLNYRQTMKSVIMPQAIKNILPALGNE 401 Query: 331 YLNLLKNSSLAVAVGFADLV 350 ++ L+K SS+ +G +++ Sbjct: 402 FVTLIKESSIVSTIGVGEIM 421 Score = 44.3 bits (103), Expect = 0.039, Method: Compositional matrix adjust. Identities = 21/67 (31%), Positives = 37/67 (55%) Query: 83 SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142 S Y + L G T ++ G+ +I+G V +LS K+++WI +Y+E+ R P L Sbjct: 257 SKYGSFFLKGIKITILISLIGVALGSILGAFVALMKLSKIKIISWIASIYIEILRGTPML 316 Query: 143 VVIFFLY 149 V +F ++ Sbjct: 317 VQVFIVF 323 >gi|317486432|ref|ZP_07945259.1| binding-protein-dependent transport system inner membrane component [Bilophila wadsworthia 3_1_6] gi|316922342|gb|EFV43601.1| binding-protein-dependent transport system inner membrane component [Bilophila wadsworthia 3_1_6] Length = 312 Score = 79.3 bits (194), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 43/125 (34%), Positives = 67/125 (53%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + L Y A++ EIVR G+ VP GQ EA+ ALG + + RLV+ PQA+R+I+PPL Q Sbjct: 187 LTLGVYEGAYVTEIVRGGIEGVPHGQWEASAALGFSRPQQLRLVIFPQAVRAILPPLVGQ 246 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 + K+S+LA + DL ++ + E+ + IYL L ++ A + L Sbjct: 247 VITTFKDSALASLISLPDLTFQALEVMAISRMTFEVWISAGAIYLLLGVLCARYGRWLET 306 Query: 391 KIALK 395 + K Sbjct: 307 RETWK 311 >gi|307299245|ref|ZP_07579046.1| polar amino acid ABC transporter, inner membrane subunit [Thermotogales bacterium mesG1.Ag.4.2] gi|306915041|gb|EFN45427.1| polar amino acid ABC transporter, inner membrane subunit [Thermotogales bacterium mesG1.Ag.4.2] Length = 244 Score = 79.3 bits (194), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 69/252 (27%), Positives = 121/252 (48%), Gaps = 26/252 (10%) Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLF 203 +++F Y SV +V P ++ + +FL+ + T ++ V + L +++ + Sbjct: 17 LLWFSYSSVSAVYPFNWSTLTKYYKLFLDG---------IMTTLQLSVIALALAVIVGI- 66 Query: 204 ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVS 263 A L+R + LY+ F +P LV+I L Y + F GS V+ Sbjct: 67 AVALARDSKVNLFRDAGTLYVWFFR--NMPLLVVILLVY-----------YGF--GSAVN 111 Query: 264 PE-FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322 + F + I+LS + A++ EI R+G+ AVP G+ EA A+GL + ++ PQA R Sbjct: 112 VDRFWAGVISLSLFEGAYVGEIFRAGIDAVPSGEKEAGEAMGLYRSQIMFSIVFPQAFRI 171 Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382 IPPL Q + L+K+SSL + DL + QT E ++ YL ++ +++ Sbjct: 172 SIPPLIGQLVTLIKDSSLVSVIALGDLTMKARQVGTQTLAVFEAYIVLAACYLVMTSLVS 231 Query: 383 LFMNRLNAKIAL 394 L L ++A+ Sbjct: 232 LVGRILERRLAI 243 >gi|258621543|ref|ZP_05716576.1| amino acid ABC transporter, permease protein [Vibrio mimicus VM573] gi|262171611|ref|ZP_06039289.1| amino acid ABC transporter permease protein [Vibrio mimicus MB-451] gi|258586161|gb|EEW10877.1| amino acid ABC transporter, permease protein [Vibrio mimicus VM573] gi|261892687|gb|EEY38673.1| amino acid ABC transporter permease protein [Vibrio mimicus MB-451] Length = 365 Score = 79.3 bits (194), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 41/112 (36%), Positives = 71/112 (63%), Gaps = 8/112 (7%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I + ++AA++AE++R GL A+P+GQ EAA ALGL++ K L++LPQA++ IP + + Sbjct: 235 IGVVMFSAAYMAEVIRGGLQAIPKGQYEAADALGLSYWKKMGLIILPQALKITIPSIVNT 294 Query: 331 YLNLLKNSSLAVAVGFADLVSVG---GTIINQTGQAIE-----IILIWMFIY 374 ++ L K++SL + +G D++ +G T N G A E ++ W+F + Sbjct: 295 FIGLFKDTSLVLIIGMFDVLGIGQSANTDPNWLGFATESYVFVALVFWIFCF 346 >gi|134098326|ref|YP_001103987.1| amino acid ABC transporter, permease protein [Saccharopolyspora erythraea NRRL 2338] gi|133910949|emb|CAM01062.1| amino acid ABC transporter, permease protein [Saccharopolyspora erythraea NRRL 2338] Length = 212 Score = 79.3 bits (194), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 45/110 (40%), Positives = 70/110 (63%), Gaps = 5/110 (4%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P F + IAL+ YT+AF+ E++RSG+ VP GQ EAA ++GL ++ V+LPQA R++ Sbjct: 80 PFFTAAVIALTVYTSAFVCEVLRSGINTVPVGQAEAARSIGLGFAQSLTNVILPQAFRAV 139 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI--INQTGQAIEIILIWM 371 +PP+ S + LLKN++ VA GF + VG I +N+ G+ +W+ Sbjct: 140 VPPMVSVLIALLKNTT--VAAGF-SVNEVGSVIPFLNEEGEPTINAFVWI 186 >gi|315638556|ref|ZP_07893732.1| His/Glu/Gln/Arg/opine amino acid ABC superfamily ATP binding cassette transporter, permease protein [Campylobacter upsaliensis JV21] gi|315481400|gb|EFU72028.1| His/Glu/Gln/Arg/opine amino acid ABC superfamily ATP binding cassette transporter, permease protein [Campylobacter upsaliensis JV21] Length = 246 Score = 79.3 bits (194), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 48/127 (37%), Positives = 82/127 (64%), Gaps = 13/127 (10%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +AL ++A+IAEIVRSG+ +V +GQMEAA A+GL ++ R ++LPQA+++I+P L ++ Sbjct: 122 LALGLNSSAYIAEIVRSGINSVDKGQMEAARAMGLDYQSTMREIILPQALKNILPALANE 181 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI-----EIILIWMFIYLSLSIM---IA 382 +++L K +S+ VGF +V + T+ +++ QA+ II + Y+S+ I + Sbjct: 182 FISLFKETSV---VGFISVVDI--TMQSKSLQAVLYNPKPIIFTGLVYYVSVKIFSLGVR 236 Query: 383 LFMNRLN 389 L RLN Sbjct: 237 LLEKRLN 243 >gi|119719814|ref|YP_920309.1| polar amino acid ABC transporter, inner membrane subunit [Thermofilum pendens Hrk 5] gi|119524934|gb|ABL78306.1| polar amino acid ABC transporter, inner membrane subunit [Thermofilum pendens Hrk 5] Length = 218 Score = 79.3 bits (194), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 45/127 (35%), Positives = 75/127 (59%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F S ++AL +AA+ AEI RS L ++P Q+ +A +LG + + R V+LPQA+R IP Sbjct: 84 FTSSFLALGLNSAAYQAEIFRSALKSIPDVQILSAESLGFSGSQVYRYVILPQALRISIP 143 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 L ++++ ++K SSLA +G +L G + T +A+E L+ IY ++ +I+ Sbjct: 144 SLVNEFVTVVKESSLASVIGIVELTRRGEYVAAYTYRALESYLVVAAIYFAVCYLISYLS 203 Query: 386 NRLNAKI 392 R+ KI Sbjct: 204 RRIEEKI 210 >gi|289642306|ref|ZP_06474454.1| polar amino acid ABC transporter, inner membrane subunit [Frankia symbiont of Datisca glomerata] gi|289507838|gb|EFD28789.1| polar amino acid ABC transporter, inner membrane subunit [Frankia symbiont of Datisca glomerata] Length = 216 Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 43/92 (46%), Positives = 63/92 (68%), Gaps = 1/92 (1%) Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 L+ YTAAF+ E VRSG+ AV GQ EAA ++GLT ++ RLV+LPQA+R++IPPL + Sbjct: 90 GLTVYTAAFVCEAVRSGIGAVETGQAEAARSIGLTFGQSLRLVILPQAIRAVIPPLGNVG 149 Query: 332 LNLLKNSSLAVAVGF-ADLVSVGGTIINQTGQ 362 + ++KNS++ A G +L SV T+ G+ Sbjct: 150 IAMVKNSAIVGAFGVGGELYSVASTLNGARGE 181 >gi|260461490|ref|ZP_05809737.1| polar amino acid ABC transporter, inner membrane subunit [Mesorhizobium opportunistum WSM2075] gi|259032560|gb|EEW33824.1| polar amino acid ABC transporter, inner membrane subunit [Mesorhizobium opportunistum WSM2075] Length = 216 Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 52/198 (26%), Positives = 95/198 (47%), Gaps = 24/198 (12%) Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFN 255 +G+V R + T + +P+L + F+ +GLP + LH Sbjct: 39 VGLVYGPTPLRWAVRIFSDTIRGIPILVLMFFVYYGLPAI-------GLHL--------- 82 Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315 P F + AL+ + A + E VR + ++P+GQ EAA+A+GLT R+ V+ Sbjct: 83 --------PSFWAAVFALTLFKTAQVVEYVRGAVGSIPQGQSEAAMAIGLTFRQRLAYVI 134 Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375 PQA R +PP + + +K S+L +G DL+ +I +T +A+ + ++ IY Sbjct: 135 FPQAFRRFLPPWINGVTDAVKGSALVSLLGITDLMQAINQVIGRTYEAMPLYILGALIYF 194 Query: 376 SLSIMIALFMNRLNAKIA 393 +++ ++L RL + + Sbjct: 195 AVNYALSLASRRLERRFS 212 >gi|116629194|ref|YP_814366.1| ABC-type amino acid transport system, permease component [Lactobacillus gasseri ATCC 33323] gi|238853887|ref|ZP_04644250.1| ABC-type amino acid transport system, permease component [Lactobacillus gasseri 202-4] gi|282851027|ref|ZP_06260401.1| ABC transporter, permease protein [Lactobacillus gasseri 224-1] gi|311111028|ref|ZP_07712425.1| amino acid ABC transporter, amino acid-binding/permease protein [Lactobacillus gasseri MV-22] gi|116094776|gb|ABJ59928.1| amino acid ABC transporter membrane protein 2, PAAT family [Lactobacillus gasseri ATCC 33323] gi|238833473|gb|EEQ25747.1| ABC-type amino acid transport system, permease component [Lactobacillus gasseri 202-4] gi|282557979|gb|EFB63567.1| ABC transporter, permease protein [Lactobacillus gasseri 224-1] gi|311066182|gb|EFQ46522.1| amino acid ABC transporter, amino acid-binding/permease protein [Lactobacillus gasseri MV-22] Length = 216 Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 64/206 (31%), Positives = 100/206 (48%), Gaps = 31/206 (15%) Query: 193 SFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPTLVLIALKYQLHF 246 SF+LG+V ++ G + LPLL I F FGLP L Sbjct: 34 SFILGLVFGFIRYVKIKYLSAVVGFVIDIIRNLPLLLIIFFTYFGLPEL----------- 82 Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306 G +P S+ IAL + A +AEIVRSG+ AV GQME A + G+T Sbjct: 83 ------------GIVTNPTVASI-IALVVFEGAMLAEIVRSGIAAVDPGQMEGARSNGMT 129 Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ-TGQAIE 365 + +A V++PQA+ +IP L SQ+++L+K++SLA + +L+ I +Q T I Sbjct: 130 YMQAMYHVIIPQALNKMIPSLLSQFVSLVKDTSLATIIVLPELLFHAQIIYSQNTTYLIP 189 Query: 366 IILIWMFIYLSLSIMIALFMNRLNAK 391 + +I +Y + +++ L +K Sbjct: 190 MYVIIAIMYFIVCFSLSMIAKHLQSK 215 >gi|330873261|gb|EGH07410.1| amino acid ABC transporter permease [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 277 Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 46/119 (38%), Positives = 74/119 (62%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IALS A+++EI R+G+I V GQ EAA+AL L + V LPQAMR+IIPP T+Q Sbjct: 148 IALSLNYGAYLSEIFRAGIIGVAAGQREAALALALRPTQIFWRVTLPQAMRTIIPPTTNQ 207 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 ++++LK+SSL +G +++ + + + + IE++ +Y +SI + L +RL Sbjct: 208 FISMLKDSSLISVMGVWEVMFLAQSYGRSSYRYIEMLTTAAVLYWIMSIGLELLQSRLE 266 >gi|320533838|ref|ZP_08034423.1| ABC transporter, permease protein [Actinomyces sp. oral taxon 171 str. F0337] gi|320133933|gb|EFW26296.1| ABC transporter, permease protein [Actinomyces sp. oral taxon 171 str. F0337] Length = 321 Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 48/130 (36%), Positives = 79/130 (60%), Gaps = 4/130 (3%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F++ + L A+++EIVRSGL +V +GQ EAA ALG++ + R ++LPQAMR I+P Sbjct: 154 FVAAVLGLGINEGAYLSEIVRSGLNSVDKGQSEAAGALGMSKSQILRRIVLPQAMRVIVP 213 Query: 326 PLTSQYLNLLKNSSLAVAVGFA-DLVSVGGTIINQTGQAIEIIL---IWMFIYLSLSIMI 381 P ++ +++LK +SL +AV F DL V + + T Q I ++L IW + S+ ++ Sbjct: 214 PTGNETISMLKTTSLVLAVPFTLDLTFVTNSYASLTYQIIPLLLVAAIWYIVITSILMVG 273 Query: 382 ALFMNRLNAK 391 ++ R K Sbjct: 274 QHYIERYYGK 283 >gi|317401659|gb|EFV82284.1| hypothetical protein HMPREF0005_00749 [Achromobacter xylosoxidans C54] Length = 229 Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 37/127 (29%), Positives = 73/127 (57%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F S + + + AA+ EI+R+G+ ++ RGQ+ A++ALGL H + R V+LPQA+R+++P Sbjct: 99 FNSAVVTFTLFEAAYFCEIMRAGIQSIARGQVSASMALGLNHWQGMRYVILPQAIRNMVP 158 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 L ++ + L +++SL + D + I + G+ +E+ L +Y + + + Sbjct: 159 ALLTRVIILFQDTSLVYVLSLTDFLGAAAKIGQRDGRLVELYLFVAVVYFVICFTASRLV 218 Query: 386 NRLNAKI 392 RL ++ Sbjct: 219 KRLEKRV 225 >gi|50123114|ref|YP_052281.1| amino acid ABC transporter permease [Pectobacterium atrosepticum SCRI1043] gi|49613640|emb|CAG77091.1| probable amino-acid ABC transporter permease protein [Pectobacterium atrosepticum SCRI1043] Length = 223 Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 65/221 (29%), Positives = 118/221 (53%), Gaps = 21/221 (9%) Query: 178 FPTLTMDTNAKIFV------FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231 FP + M +F+ F+ VLG++L+L R + LYIS F G Sbjct: 12 FPQVLMYLPTTLFLAVVSMFFAMVLGLILALV-----RESKIVVVVKIVELYISLFR--G 64 Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291 +P+LV + + ++F P L F G S + ++ I S T+A++AEI R+GL + Sbjct: 65 IPSLVQL---FIIYFGLPQL----FPGLSNLDAMTAAI-IGFSLKTSAYMAEIFRAGLAS 116 Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 V GQ EA +++G++ + R ++LPQAM + +P + +++L+K++S+A A+G ++L + Sbjct: 117 VDFGQTEAGLSIGMSKAQVYRRIVLPQAMLNALPATGNTFISLIKDTSVAFALGVSELFA 176 Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 G I ++ + E L+ IY + ++ A +L K+ Sbjct: 177 EGKMIAAESLRFFETFLVVGLIYWMVIVVYAWLQKQLEKKL 217 >gi|37528306|ref|NP_931651.1| hypothetical protein plu4485 [Photorhabdus luminescens subsp. laumondii TTO1] gi|36787744|emb|CAE16857.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii TTO1] Length = 233 Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 64/206 (31%), Positives = 105/206 (50%), Gaps = 16/206 (7%) Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV-LIALKYQLHFDKPVL 251 +F LGI+L F L R + K A+ Y+ +LI G P LV L + Y L L Sbjct: 31 TFTLGIILG-FIVALIRLYGPKPLIAVAKFYV--WLIRGTPLLVQLFLIFYALPSVGITL 87 Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311 G F S I + A+ +EI+R+ L++VP+GQ EAA ++G++ ++ Sbjct: 88 GAFT------------SAVIGFTLNIGAYTSEIIRATLLSVPKGQWEAAYSIGMSWTQSL 135 Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371 R ++LPQA R IPPL++ +++L+K++SLA + +L I T Q + + Sbjct: 136 RRIILPQAARIAIPPLSNTFISLVKDTSLASVITVPELFLAAQRIAAVTYQPLILYTEAA 195 Query: 372 FIYLSLSIMIALFMNRLNAKIALKEK 397 +YL +S +++ RL K + K Sbjct: 196 ILYLIISSVLSSLQTRLEKKFSQKSD 221 >gi|228987345|ref|ZP_04147465.1| Arginine transport system permease protein artQ [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228772317|gb|EEM20763.1| Arginine transport system permease protein artQ [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 222 Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 40/129 (31%), Positives = 78/129 (60%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P F++ +A S + A+++E++R+G+ AV +GQ EAA+ALG+ + K R ++ PQA+++I Sbjct: 90 PAFLAAVLAFSLNSGAYMSEVIRAGIQAVDKGQTEAAMALGIPYGKMMRNIIFPQALKNI 149 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 +P L +++ L K S++ +G DL+ + +T + +E +L IY L I++ L Sbjct: 150 LPALVNEFATLTKESAVVTVIGATDLMRRAYIVGGETFKYLEPLLFVGLIYYMLVIILTL 209 Query: 384 FMNRLNAKI 392 + ++ Sbjct: 210 VGKAIEGRM 218 >gi|24378751|ref|NP_720706.1| putative amino acid ABC transporter, permease protein, glutamine transport system [Streptococcus mutans UA159] gi|24376619|gb|AAN58012.1|AE014873_8 putative amino acid ABC transporter, permease protein, glutamine transport system [Streptococcus mutans UA159] Length = 517 Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 41/120 (34%), Positives = 70/120 (58%) Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 +S T A+++EIVR G+ AV +GQ EAA ALG THR+ R ++LPQ +R+I+P ++++ Sbjct: 385 VSINTGAYMSEIVRGGIFAVDKGQFEAATALGFTHRQTMRKIVLPQVVRNILPATGNEFV 444 Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 +K++S+ + +L G T+ QT Q + I IY L+ + + + K+ Sbjct: 445 INIKDTSVLNVISVVELYFSGNTVATQTYQYFQTFFIIAVIYFILTFTVTRILRLVERKM 504 >gi|320011626|gb|ADW06476.1| polar amino acid ABC transporter, inner membrane subunit [Streptomyces flavogriseus ATCC 33331] Length = 288 Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 62/198 (31%), Positives = 109/198 (55%), Gaps = 16/198 (8%) Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248 + V F LG +L++ RLS + +A+ YI +L P LV + + + Sbjct: 87 VMVLGFALGTLLAVL--RLS---GNRVLQAVSWGYI--WLFRSTPILVQLLFWFNIGALY 139 Query: 249 P-VLG--QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305 P +LG N +G TV+ I L+ + AA+ AE+VR G+++V RGQ+EAA +LGL Sbjct: 140 PQILGVSTVNLLGPVTVA------VIGLTLHEAAYAAEVVRGGILSVERGQLEAAQSLGL 193 Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365 + R ++LPQAMRSI+PP + + LK +S+ + DL+ + ++T + I Sbjct: 194 GPWRRLRRIVLPQAMRSIVPPAGNMLIGTLKGTSIVSIIAVQDLLYSVQLVYHRTYEVIP 253 Query: 366 IILIWMFIYLSLSIMIAL 383 ++L+ Y++++ +++L Sbjct: 254 LLLVATLWYVAVTSLLSL 271 >gi|257070102|ref|YP_003156357.1| amino acid ABC transporter membrane protein [Brachybacterium faecium DSM 4810] gi|256560920|gb|ACU86767.1| amino acid ABC transporter membrane protein [Brachybacterium faecium DSM 4810] Length = 277 Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 63/211 (29%), Positives = 111/211 (52%), Gaps = 18/211 (8%) Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALK 241 T+ A V +F G++L+L R+SR + KA+ + +I F G+P L+++ Sbjct: 78 TLKVTALAAVVAFPFGLLLAL--ARMSRF---RLLKAVAVTWIEFFR--GIPMLLVV--- 127 Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301 Y P G P F L + + ++A AE+ R+G+ AV +GQ EAA Sbjct: 128 YAFLLALPAFG--------VTFPRFWMLVVPMILVSSAATAEVFRAGIKAVDKGQHEAAD 179 Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361 A+GL+ R + V+LPQA+R ++P L + LLK+S+L V + +L G T+++ T Sbjct: 180 AIGLSRRDSLIYVVLPQAVRLVLPSLILALVTLLKDSTLGYVVSYNELQFQGKTLVSITR 239 Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 ++ L+ IY+ +++M+ L+A++ Sbjct: 240 YLVQTYLVVSVIYIVINLMLTRVALSLDARM 270 >gi|229013364|ref|ZP_04170504.1| Arginine transport system permease protein artQ [Bacillus mycoides DSM 2048] gi|229134968|ref|ZP_04263774.1| Arginine transport system permease protein artQ [Bacillus cereus BDRD-ST196] gi|228648470|gb|EEL04499.1| Arginine transport system permease protein artQ [Bacillus cereus BDRD-ST196] gi|228747957|gb|EEL97822.1| Arginine transport system permease protein artQ [Bacillus mycoides DSM 2048] Length = 225 Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 40/129 (31%), Positives = 78/129 (60%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P F++ +A S + A+++E++R+G+ AV +GQ EAA+ALG+ + K R ++ PQA+++I Sbjct: 93 PAFLAAVLAFSLNSGAYMSEVIRAGIQAVDKGQTEAAMALGIPYSKMMRNIIFPQALKNI 152 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 +P L +++ L K S++ +G DL+ + +T + +E +L IY L I++ L Sbjct: 153 LPALVNEFATLTKESAVVTVIGATDLMRRAYIVGGETFKYLEPLLFVGLIYYILVIILTL 212 Query: 384 FMNRLNAKI 392 + ++ Sbjct: 213 VGKAIEGRM 221 >gi|227879036|ref|ZP_03996929.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus crispatus JV-V01] gi|256844250|ref|ZP_05549736.1| ABC amino acid transporter permease [Lactobacillus crispatus 125-2-CHN] gi|256849349|ref|ZP_05554782.1| amino acid ABC transporter permease [Lactobacillus crispatus MV-1A-US] gi|262047629|ref|ZP_06020583.1| amino acid ABC transporter permease [Lactobacillus crispatus MV-3A-US] gi|227861370|gb|EEJ68996.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus crispatus JV-V01] gi|256613328|gb|EEU18531.1| ABC amino acid transporter permease [Lactobacillus crispatus 125-2-CHN] gi|256714125|gb|EEU29113.1| amino acid ABC transporter permease [Lactobacillus crispatus MV-1A-US] gi|260572029|gb|EEX28595.1| amino acid ABC transporter permease [Lactobacillus crispatus MV-3A-US] Length = 537 Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 42/116 (36%), Positives = 73/116 (62%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I +S T A++AE++R G+I+ P GQ EAA ALG+TH + ++LPQA+R+ +P +T++ Sbjct: 391 IIVSINTGAYLAEVIRGGIISTPEGQFEAASALGMTHNQRMWHIILPQAIRNCLPSITNE 450 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386 ++ +K++S+ + ++L VG TI +Q+ + L+ IYL L+ I N Sbjct: 451 FIVNIKDTSVLSIISVSELFFVGTTIASQSFKFFPTYLMISAIYLILTFTITRIFN 506 Score = 37.0 bits (84), Expect = 5.9, Method: Compositional matrix adjust. Identities = 29/93 (31%), Positives = 39/93 (41%), Gaps = 10/93 (10%) Query: 67 RAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVG----------A 116 +AG E + T+ Y I+ G T LA G I IG LVG Sbjct: 280 KAGNETKKENWLVTTWKQYGGMIMSGIGMTLLLALVGTIVGFFIGLLVGIIRTIPTPTTR 339 Query: 117 GRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 G+ +V W+ VYVE+FR P +V +Y Sbjct: 340 GKRWTLNVVKWLLSVYVEIFRGTPMMVQAAVIY 372 >gi|218284064|ref|ZP_03489892.1| hypothetical protein EUBIFOR_02495 [Eubacterium biforme DSM 3989] gi|218215386|gb|EEC88924.1| hypothetical protein EUBIFOR_02495 [Eubacterium biforme DSM 3989] Length = 227 Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 40/126 (31%), Positives = 76/126 (60%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IALS + A+ E++RSG+ V +GQ EA LGL++ K +LV+LPQA + ++PPL S+ Sbjct: 102 IALSINSGAYQTELLRSGINGVDKGQWEACETLGLSNWKTMKLVILPQAFKRVVPPLISE 161 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++ L+K+SSL +G +L+ I + + ++ YL ++ +++ N++ Sbjct: 162 FITLIKDSSLISCIGAVELLKGAQVIGAEYYDVMSPYMLAAIFYLIMTCIVSCIGNKVEK 221 Query: 391 KIALKE 396 ++A+ + Sbjct: 222 RLAVSD 227 >gi|118479346|ref|YP_896497.1| amino acid ABC transporter permease [Bacillus thuringiensis str. Al Hakam] gi|228947870|ref|ZP_04110157.1| Arginine transport system permease protein artQ [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|118418571|gb|ABK86990.1| L-arginine ABC transporter membrane protein [Bacillus thuringiensis str. Al Hakam] gi|228811857|gb|EEM58191.1| Arginine transport system permease protein artQ [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] Length = 225 Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 40/129 (31%), Positives = 78/129 (60%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P F++ +A S + A+++E++R+G+ AV +GQ EAA+ALG+ + K R ++ PQA+++I Sbjct: 93 PAFLAAVLAFSLNSGAYMSEVIRAGIQAVDKGQTEAAMALGIPYGKMMRNIIFPQALKNI 152 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 +P L +++ L K S++ +G DL+ + +T + +E +L IY L I++ L Sbjct: 153 LPALVNEFATLTKESAVVTVIGATDLMRRAYIVGGETFKYLEPLLFVGLIYYMLVIILTL 212 Query: 384 FMNRLNAKI 392 + ++ Sbjct: 213 VGKAIEGRM 221 >gi|152984787|ref|YP_001351211.1| ABC transporter permease [Pseudomonas aeruginosa PA7] gi|150959945|gb|ABR81970.1| probable permease of ABC transporter [Pseudomonas aeruginosa PA7] Length = 230 Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 60/190 (31%), Positives = 104/190 (54%), Gaps = 15/190 (7%) Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFN 255 L + L L R SRH++ + ALP YI F G P L+ QL L QF Sbjct: 33 LALALPLGIARASRHWYVR---ALPYAYI--FFFRGTPLLL------QLFIVYYGLAQFE 81 Query: 256 FIGGSTVSPEFMSLY----IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311 + S P Y + ++ +TAA+IAEI+R + +VP G++EAA ALG++ R+A Sbjct: 82 EVRKSAFWPYLRDPYWCALLTMTLHTAAYIAEILRGAIHSVPVGEVEAARALGMSRRQAL 141 Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371 ++LP+A+R +P +++ + +LK S++ V D++ + TII +T +++ + Sbjct: 142 WHIILPRAVRIGLPAYSNEVILMLKASAVVYTVTLFDIMGMARTIIARTYESMLFFCLAG 201 Query: 372 FIYLSLSIMI 381 +YL ++I++ Sbjct: 202 ALYLVITIVL 211 >gi|30264228|ref|NP_846605.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. Ames] gi|47529671|ref|YP_021020.1| amino acid ABC transporter permease [Bacillus anthracis str. 'Ames Ancestor'] gi|47568216|ref|ZP_00238920.1| MW1799 [Bacillus cereus G9241] gi|49187056|ref|YP_030308.1| amino acid ABC transporter permease [Bacillus anthracis str. Sterne] gi|49480913|ref|YP_038216.1| amino acid ABC transporter permease [Bacillus thuringiensis serovar konkukian str. 97-27] gi|52141345|ref|YP_085484.1| amino acid ABC transporter, permease [Bacillus cereus E33L] gi|65321542|ref|ZP_00394501.1| COG0765: ABC-type amino acid transport system, permease component [Bacillus anthracis str. A2012] gi|190565774|ref|ZP_03018693.1| amino acid ABC transporter, permease protein [Bacillus anthracis Tsiankovskii-I] gi|196034913|ref|ZP_03102320.1| amino acid ABC transporter, permease protein [Bacillus cereus W] gi|196047222|ref|ZP_03114438.1| amino acid ABC transporter, permease protein [Bacillus cereus 03BB108] gi|218905289|ref|YP_002453123.1| amino acid ABC transporter, permease protein [Bacillus cereus AH820] gi|225866135|ref|YP_002751513.1| amino acid ABC transporter, permease protein [Bacillus cereus 03BB102] gi|227816929|ref|YP_002816938.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. CDC 684] gi|229163089|ref|ZP_04291045.1| Arginine transport system permease protein artQ [Bacillus cereus R309803] gi|229603243|ref|YP_002868448.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. A0248] gi|254683918|ref|ZP_05147778.1| amino acid ABC transporter, permease component [Bacillus anthracis str. CNEVA-9066] gi|254721753|ref|ZP_05183542.1| amino acid ABC transporter, permease component [Bacillus anthracis str. A1055] gi|254736266|ref|ZP_05193972.1| amino acid ABC transporter, permease component [Bacillus anthracis str. Western North America USA6153] gi|254744155|ref|ZP_05201838.1| amino acid ABC transporter, permease component [Bacillus anthracis str. Kruger B] gi|254754062|ref|ZP_05206097.1| amino acid ABC transporter, permease component [Bacillus anthracis str. Vollum] gi|254758245|ref|ZP_05210272.1| amino acid ABC transporter, permease component [Bacillus anthracis str. Australia 94] gi|301055646|ref|YP_003793857.1| amino acid ABC transporter permease [Bacillus anthracis CI] gi|30258873|gb|AAP28091.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. Ames] gi|47504819|gb|AAT33495.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. 'Ames Ancestor'] gi|47555206|gb|EAL13553.1| MW1799 [Bacillus cereus G9241] gi|49180983|gb|AAT56359.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. Sterne] gi|49332469|gb|AAT63115.1| amino acid ABC transporter, permease [Bacillus thuringiensis serovar konkukian str. 97-27] gi|51974814|gb|AAU16364.1| amino acid ABC transporter, permease [Bacillus cereus E33L] gi|190562693|gb|EDV16659.1| amino acid ABC transporter, permease protein [Bacillus anthracis Tsiankovskii-I] gi|195992452|gb|EDX56413.1| amino acid ABC transporter, permease protein [Bacillus cereus W] gi|196021971|gb|EDX60662.1| amino acid ABC transporter, permease protein [Bacillus cereus 03BB108] gi|218537877|gb|ACK90275.1| amino acid ABC transporter, permease protein [Bacillus cereus AH820] gi|225787572|gb|ACO27789.1| amino acid ABC transporter, permease protein [Bacillus cereus 03BB102] gi|227002630|gb|ACP12373.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. CDC 684] gi|228620495|gb|EEK77365.1| Arginine transport system permease protein artQ [Bacillus cereus R309803] gi|229267651|gb|ACQ49288.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. A0248] gi|300377815|gb|ADK06719.1| amino acid ABC transporter, permease [Bacillus cereus biovar anthracis str. CI] Length = 219 Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 40/129 (31%), Positives = 78/129 (60%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P F++ +A S + A+++E++R+G+ AV +GQ EAA+ALG+ + K R ++ PQA+++I Sbjct: 87 PAFLAAVLAFSLNSGAYMSEVIRAGIQAVDKGQTEAAMALGIPYGKMMRNIIFPQALKNI 146 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 +P L +++ L K S++ +G DL+ + +T + +E +L IY L I++ L Sbjct: 147 LPALVNEFATLTKESAVVTVIGATDLMRRAYIVGGETFKYLEPLLFVGLIYYMLVIILTL 206 Query: 384 FMNRLNAKI 392 + ++ Sbjct: 207 VGKAIEGRM 215 >gi|299535498|ref|ZP_07048819.1| amino-acid ABC transporter permease protein [Lysinibacillus fusiformis ZC1] gi|298728698|gb|EFI69252.1| amino-acid ABC transporter permease protein [Lysinibacillus fusiformis ZC1] Length = 237 Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 58/193 (30%), Positives = 95/193 (49%), Gaps = 21/193 (10%) Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLV-----LIALKYQLHFDKPVLGQFNFIGGSTVSP 264 +F+ + P++ + FGLP LV L+ LK Q S P Sbjct: 56 NFYVSFFRGTPIIMHIMLVYFGLPMLVDSVANLLHLKIQ----------------SNSIP 99 Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 + +AL+ A+ +EI+RSG++AVP+GQ+EAA A+GLT +A R +LPQA I Sbjct: 100 ILFFVILALTLSAGAYASEIIRSGILAVPKGQLEAAYAIGLTFPQAMRRYILPQAFGQSI 159 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 P LT+ ++ L +SLA + +L V I + + +E + IY +SI++ Sbjct: 160 PNLTNVFIGFLHATSLAFFLSIKELTGVANIIASMNLKFLESFIAVGLIYWGISIIVEWV 219 Query: 385 MNRLNAKIALKEK 397 +R+ ++ K Sbjct: 220 SHRIEKRVTAYSK 232 >gi|253735261|ref|ZP_04869426.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Staphylococcus aureus subsp. aureus TCH130] gi|253726668|gb|EES95397.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Staphylococcus aureus subsp. aureus TCH130] Length = 485 Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 34/80 (42%), Positives = 61/80 (76%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IAL ++A+IAEI+R+G+ AV +GQMEAA +LGL +R+ + V++PQA+++I+P L ++ Sbjct: 360 IALVINSSAYIAEIIRAGINAVDKGQMEAARSLGLNYRQTMKSVIMPQAIKNILPALGNE 419 Query: 331 YLNLLKNSSLAVAVGFADLV 350 ++ L+K SS+ +G +++ Sbjct: 420 FVTLIKESSIVSTIGVGEIM 439 Score = 44.3 bits (103), Expect = 0.034, Method: Compositional matrix adjust. Identities = 21/67 (31%), Positives = 37/67 (55%) Query: 83 SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142 S Y + L G T ++ G+ +I+G V +LS K+++WI +Y+E+ R P L Sbjct: 275 SKYGSFFLKGIKITILISLIGVALGSILGAFVALMKLSKIKIISWIASIYIEILRGTPML 334 Query: 143 VVIFFLY 149 V +F ++ Sbjct: 335 VQVFIVF 341 >gi|257069403|ref|YP_003155658.1| amino acid ABC transporter membrane protein [Brachybacterium faecium DSM 4810] gi|256560221|gb|ACU86068.1| amino acid ABC transporter membrane protein [Brachybacterium faecium DSM 4810] Length = 297 Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 35/86 (40%), Positives = 64/86 (74%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 + ++ I L+ Y A IAE++RSG+ ++P+GQ EAA A+G+T+ ++ R+V +PQA+ +++P Sbjct: 146 YFAVIIGLTVYNGAVIAELIRSGVRSLPKGQREAAAAIGMTNNQSLRIVEVPQALTAMLP 205 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVS 351 L SQ++ +LK+S+L +GF +L+ Sbjct: 206 SLLSQFVVILKDSALGFLIGFYELLQ 231 >gi|229061835|ref|ZP_04199166.1| Arginine transport system permease protein artQ [Bacillus cereus AH603] gi|228717444|gb|EEL69111.1| Arginine transport system permease protein artQ [Bacillus cereus AH603] Length = 219 Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 40/129 (31%), Positives = 78/129 (60%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P F++ +A S + A+++E++R+G+ AV +GQ EAA+ALG+ + K R ++ PQA+++I Sbjct: 87 PAFLAAVLAFSLNSGAYMSEVIRAGIQAVDKGQTEAAMALGIPYSKMMRNIIFPQALKNI 146 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 +P L +++ L K S++ +G DL+ + +T + +E +L IY L I++ L Sbjct: 147 LPALVNEFATLTKESAVVTVIGATDLMRRAYIVGGETFKYLEPLLFVGLIYYILVIILTL 206 Query: 384 FMNRLNAKI 392 + ++ Sbjct: 207 VGKAIEGRM 215 >gi|302189137|ref|ZP_07265810.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. syringae 642] Length = 277 Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 46/119 (38%), Positives = 74/119 (62%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IALS A+++EI R+G+I V GQ EAA+AL L + V LPQAMR+IIPP T+Q Sbjct: 148 IALSLNYGAYLSEIFRAGIIGVSAGQREAAMALALRPAQIFWRVTLPQAMRTIIPPTTNQ 207 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 ++++LK+SSL +G +++ + + + + IE++ +Y +SI + L +RL Sbjct: 208 FISMLKDSSLISVMGVWEVMFLAQSYGRSSYRYIEMLTTAAVLYWIMSIGLELLQSRLE 266 >gi|317047795|ref|YP_004115443.1| polar amino acid ABC transporter inner membrane subunit [Pantoea sp. At-9b] gi|316949412|gb|ADU68887.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea sp. At-9b] Length = 291 Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 53/167 (31%), Positives = 91/167 (54%), Gaps = 9/167 (5%) Query: 231 GLPTLVLIALKYQLHFDKP-----VLGQFNFIGGST---VSPEFMSLYIALSCYTAAFIA 282 G P LV + Y L P + G F GST ++P + + L +A++A Sbjct: 118 GTPVLVQLIFWYNLAALYPQVSLGIPGLFTLWSGSTNDLITP-LAAAILGLGLNESAYMA 176 Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342 EI+R+G+ +V GQ EAA ALG+T + + V+LPQA+ IIPP +Q + +LK +SL Sbjct: 177 EIIRAGISSVDDGQQEAARALGMTRGQYLKRVILPQAIPFIIPPTGNQVIGMLKTTSLVS 236 Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 + +DL+ I ++T + I ++++ YL+ + +++L R+ Sbjct: 237 VISLSDLLYSAQAIYSRTYENIPLLIVACIWYLAATTVLSLVQARVE 283 Score = 40.4 bits (93), Expect = 0.47, Method: Compositional matrix adjust. Identities = 22/66 (33%), Positives = 35/66 (53%) Query: 85 YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144 ++ IL+G TFWL M+ A ++ L+ RL++N L+ R ++ FR P LV Sbjct: 65 FSPTILLGLWTTFWLTLVIMVLAIVLSILLAVMRLASNPLLVGFSRGWIWFFRGTPVLVQ 124 Query: 145 IFFLYK 150 + F Y Sbjct: 125 LIFWYN 130 >gi|290581241|ref|YP_003485633.1| putative amino acid ABC transporter permease [Streptococcus mutans NN2025] gi|254998140|dbj|BAH88741.1| putative amino acid ABC transporter permease protein [Streptococcus mutans NN2025] Length = 517 Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 41/120 (34%), Positives = 70/120 (58%) Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 +S T A+++EIVR G+ AV +GQ EAA ALG THR+ R ++LPQ +R+I+P ++++ Sbjct: 385 VSINTGAYMSEIVRGGIFAVDKGQFEAATALGFTHRQTMRKIVLPQVVRNILPATGNEFV 444 Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 +K++S+ + +L G T+ QT Q + I IY L+ + + + K+ Sbjct: 445 INIKDTSVLNVISVVELYFSGNTVATQTYQYFQTFFIIAVIYFILTFTVTRILRLVERKM 504 >gi|213967200|ref|ZP_03395349.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tomato T1] gi|301381064|ref|ZP_07229482.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tomato Max13] gi|302061561|ref|ZP_07253102.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tomato K40] gi|213928042|gb|EEB61588.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tomato T1] gi|331018098|gb|EGH98154.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 277 Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 46/119 (38%), Positives = 74/119 (62%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IALS A+++EI R+G+I V GQ EAA+AL L + V LPQAMR+IIPP T+Q Sbjct: 148 IALSLNYGAYLSEIFRAGIIGVAAGQREAALALALRPTQIFWRVTLPQAMRTIIPPTTNQ 207 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 ++++LK+SSL +G +++ + + + + IE++ +Y +SI + L +RL Sbjct: 208 FISMLKDSSLISVMGVWEVMFLAQSYGRSSYRYIEMLTTAAVLYWIMSIGLELLQSRLE 266 >gi|165871415|ref|ZP_02216063.1| putative amino acid ABC transporter, permease protein [Bacillus anthracis str. A0488] gi|167634127|ref|ZP_02392449.1| putative amino acid ABC transporter, permease protein [Bacillus anthracis str. A0442] gi|167640079|ref|ZP_02398346.1| putative amino acid ABC transporter, permease protein [Bacillus anthracis str. A0193] gi|170688352|ref|ZP_02879561.1| putative amino acid ABC transporter, permease protein [Bacillus anthracis str. A0465] gi|170708925|ref|ZP_02899358.1| putative amino acid ABC transporter, permease protein [Bacillus anthracis str. A0389] gi|177653629|ref|ZP_02935768.1| putative amino acid ABC transporter, permease protein [Bacillus anthracis str. A0174] gi|190567465|ref|ZP_03020378.1| putative amino acid ABC transporter, permease protein [Bacillus anthracis Tsiankovskii-I] gi|227813034|ref|YP_002813043.1| putative amino acid ABC transporter, permease protein [Bacillus anthracis str. CDC 684] gi|229603364|ref|YP_002864981.1| putative amino acid ABC transporter, permease protein [Bacillus anthracis str. A0248] gi|254686755|ref|ZP_05150613.1| amino acid ABC transproter, permease [Bacillus anthracis str. CNEVA-9066] gi|254724831|ref|ZP_05186614.1| amino acid ABC transproter, permease [Bacillus anthracis str. A1055] gi|254739022|ref|ZP_05196724.1| amino acid ABC transproter, permease [Bacillus anthracis str. Western North America USA6153] gi|254740746|ref|ZP_05198436.1| amino acid ABC transproter, permease [Bacillus anthracis str. Kruger B] gi|254756134|ref|ZP_05208163.1| amino acid ABC transproter, permease [Bacillus anthracis str. Vollum] gi|254761952|ref|ZP_05213801.1| amino acid ABC transproter, permease [Bacillus anthracis str. Australia 94] gi|164712899|gb|EDR18428.1| putative amino acid ABC transporter, permease protein [Bacillus anthracis str. A0488] gi|167511890|gb|EDR87269.1| putative amino acid ABC transporter, permease protein [Bacillus anthracis str. A0193] gi|167530441|gb|EDR93156.1| putative amino acid ABC transporter, permease protein [Bacillus anthracis str. A0442] gi|170126158|gb|EDS95052.1| putative amino acid ABC transporter, permease protein [Bacillus anthracis str. A0389] gi|170667684|gb|EDT18438.1| putative amino acid ABC transporter, permease protein [Bacillus anthracis str. A0465] gi|172081209|gb|EDT66284.1| putative amino acid ABC transporter, permease protein [Bacillus anthracis str. A0174] gi|190561252|gb|EDV15224.1| putative amino acid ABC transporter, permease protein [Bacillus anthracis Tsiankovskii-I] gi|227002430|gb|ACP12173.1| putative amino acid ABC transporter, permease protein [Bacillus anthracis str. CDC 684] gi|229267772|gb|ACQ49409.1| putative amino acid ABC transporter, permease protein [Bacillus anthracis str. A0248] Length = 230 Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 74/223 (33%), Positives = 116/223 (52%), Gaps = 19/223 (8%) Query: 177 SFPTLTMDT--NAKIFVFSFVLGIVLSL-FATRLSRHFHEKTGKALPLLYISTFLIFGLP 233 ++PTL T ++ + S VLG ++ L FA R + K ++ +YI+ +I G P Sbjct: 8 TYPTLLKATIVTLQLTLTSLVLGSLIGLLFA--FFRISNNKVLNSIAHVYIA--IIRGTP 63 Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293 +V IA+ Y F +P F + IAL+ + A+I EI R + +V Sbjct: 64 LIVQIAILY-----------FGITSVVVFTP-FWAGAIALAIHNGAYITEIFRGSIQSVD 111 Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353 RGQMEAA +LG+ + A R ++LPQA R +PPL +Q++ LK+SSL VG A+L G Sbjct: 112 RGQMEAARSLGMPYPLAMRRIVLPQAFRQSLPPLGNQFIIGLKDSSLVAYVGMAELWGSG 171 Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 +I Q ++ +I YL L ++ +N L ++ KE Sbjct: 172 LSIAAGNFQQLDTYIIVGLYYLVLVLLFTYLVNLLEKRLQRKE 214 >gi|71064875|ref|YP_263602.1| ABC basic amino acid transporter, inner membrane subunit [Psychrobacter arcticus 273-4] gi|71037860|gb|AAZ18168.1| ABC basic amino acid transporter, inner membrane subunit [Psychrobacter arcticus 273-4] Length = 241 Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 66/213 (30%), Positives = 110/213 (51%), Gaps = 22/213 (10%) Query: 188 KIFVFSFVLGIVLSLFAT--RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH 245 ++ +FS V+G+ L RLS+++ + LP LYI F G P LV I L Y Sbjct: 24 QLVIFSGVIGLFFGLVLALLRLSKNWMVQI---LPFLYI--FFFRGTPLLVQIFLIYY-- 76 Query: 246 FDKPVLGQF-----NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300 LGQF +F+ +S + IA + T+A++AEI+R + +P G++EAA Sbjct: 77 ----GLGQFEAVRESFLWEPVLSQAYWCAIIAFTLNTSAYLAEIIRGAIQNIPVGELEAA 132 Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 A+G++ + + LP+A +IP +++ + +LK S+LA + D+ V TI +T Sbjct: 133 DAIGMSKWQKLTRITLPRAFGIVIPVYSNEVIFMLKGSALASTIALMDITGVARTISART 192 Query: 361 GQAIEIILIWMFIYLSLSIMI----ALFMNRLN 389 +E+ +YL LS +I +F R+N Sbjct: 193 YTLMELFFAAGIVYLLLSWVILFSFRMFEKRMN 225 >gi|227890382|ref|ZP_04008187.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus johnsonii ATCC 33200] gi|268319112|ref|YP_003292768.1| hypothetical protein FI9785_623 [Lactobacillus johnsonii FI9785] gi|227849196|gb|EEJ59282.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus johnsonii ATCC 33200] gi|262397487|emb|CAX66501.1| unnamed protein product [Lactobacillus johnsonii FI9785] Length = 216 Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 59/173 (34%), Positives = 86/173 (49%), Gaps = 30/173 (17%) Query: 193 SFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPTLVLIALKYQLHF 246 SFVLG+V ++ G + LPLL I F FGLP L Sbjct: 34 SFVLGLVFGFIRYVKIKYLSAIVGFVIDIIRNLPLLLIIFFTYFGLPEL----------- 82 Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306 G +P S+ IAL + A +AEIVRSG+ AV GQME A + G+T Sbjct: 83 ------------GIITNPTIASI-IALVVFEGAMLAEIVRSGIAAVDPGQMEGARSNGMT 129 Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359 + +A V++PQA+ +IP L SQ+++L+K++SLA + +L+ I +Q Sbjct: 130 YMQAMYHVIIPQALNKMIPSLLSQFVSLVKDTSLATIIVLPELLFHAQIIYSQ 182 >gi|329666943|gb|AEB92891.1| glutamine ABC transporter permease component [Lactobacillus johnsonii DPC 6026] Length = 216 Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 66/205 (32%), Positives = 99/205 (48%), Gaps = 34/205 (16%) Query: 193 SFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPTLVLIALKYQLHF 246 SFVLG+V ++ G + LPLL I F FGLP L Sbjct: 34 SFVLGLVFGFIRYVKIKYLSAIVGFVIDIIRNLPLLLIIFFTYFGLPEL----------- 82 Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306 G +P S+ IAL + A +AEIVRSG+ AV GQME A + G+T Sbjct: 83 ------------GIITNPTVASI-IALVVFEGAMLAEIVRSGIAAVDPGQMEGARSNGMT 129 Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 + +A V++PQA+ +IP L SQ+++L+K++SLA + +L+ I +Q Sbjct: 130 YMQAMYHVIIPQALNKMIPSLLSQFVSLVKDTSLATIIVLPELLFHAQIIYSQNTTY--- 186 Query: 367 ILIWMFIYLSLSIMIALFMNRLNAK 391 LI M++ +++ I F + AK Sbjct: 187 -LIPMYVIIAIMYFIVCFSLSMVAK 210 >gi|293608328|ref|ZP_06690631.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|292828901|gb|EFF87263.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|325121938|gb|ADY81461.1| glutamate/aspartate transport protein (ABC superfamily, membrane) [Acinetobacter calcoaceticus PHEA-2] Length = 225 Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 47/143 (32%), Positives = 79/143 (55%), Gaps = 3/143 (2%) Query: 254 FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313 F F + P F S+ + + + AAF +EIVRSG+ ++ +GQ+ A ALG T+ ++ R Sbjct: 82 FEFQSDTYWGPLFSSV-VTFAIFEAAFFSEIVRSGIQSISKGQVHAGYALGFTYGQSMRY 140 Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE--IILIWM 371 V+LPQA R+++P L +Q + L ++ SL + D + T+ N G + LI Sbjct: 141 VVLPQAFRNMLPVLLTQTIILFQDISLVYVISAPDFLGRADTLANTYGPETKATFYLIVA 200 Query: 372 FIYLSLSIMIALFMNRLNAKIAL 394 +Y S +++ + RL KIA+ Sbjct: 201 VVYFCSSFVLSHLVKRLQQKIAI 223 Score = 40.4 bits (93), Expect = 0.48, Method: Compositional matrix adjust. Identities = 22/62 (35%), Positives = 35/62 (56%) Query: 88 AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147 A+ GF+ T + M+ +IGT + RLS+N + + + YV++FR IP + VIF Sbjct: 14 ALKEGFIFTLTVTVLAMMGGILIGTPLAMMRLSSNAIASNFAKFYVDLFRGIPLIQVIFI 73 Query: 148 LY 149 Y Sbjct: 74 FY 75 >gi|229140887|ref|ZP_04269432.1| Arginine transport system permease protein artQ [Bacillus cereus BDRD-ST26] gi|229198282|ref|ZP_04324989.1| Arginine transport system permease protein artQ [Bacillus cereus m1293] gi|228585161|gb|EEK43272.1| Arginine transport system permease protein artQ [Bacillus cereus m1293] gi|228642677|gb|EEK98963.1| Arginine transport system permease protein artQ [Bacillus cereus BDRD-ST26] Length = 222 Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 40/129 (31%), Positives = 78/129 (60%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P F++ +A S + A+++E++R+G+ AV +GQ EAA+ALG+ + K R ++ PQA+++I Sbjct: 90 PAFLAAVLAFSLNSGAYMSEVIRAGIQAVDKGQTEAAMALGIPYGKMMRNIIFPQALKNI 149 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 +P L +++ L K S++ +G DL+ + +T + +E +L IY L I++ L Sbjct: 150 LPALVNEFATLTKESAVVTVIGATDLMRRAYIVGGETFKYLEPLLFVGLIYYMLVIILTL 209 Query: 384 FMNRLNAKI 392 + ++ Sbjct: 210 VGKAIEGRM 218 >gi|239821010|ref|YP_002948195.1| polar amino acid ABC transporter, inner membrane subunit [Variovorax paradoxus S110] gi|239805863|gb|ACS22929.1| polar amino acid ABC transporter, inner membrane subunit [Variovorax paradoxus S110] Length = 233 Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 45/111 (40%), Positives = 70/111 (63%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +AL AA+ +E +RSGL ++P GQ EAA ALG + + R V+LPQA+R+ +P L + Sbjct: 106 VALGLCQAAYFSEDMRSGLRSIPPGQAEAARALGHGYIGSMRHVMLPQAIRNAVPALVNH 165 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 ++L KNSSLA+A+G A+L I +Q+ + E + +YL S++I Sbjct: 166 SVSLFKNSSLAMAIGVAELTHAVKEIESQSFRTFEAYSMATVLYLVCSLLI 216 >gi|254506010|ref|ZP_05118155.1| amino acid ABC transporter, permease protein [Vibrio parahaemolyticus 16] gi|219551233|gb|EED28213.1| amino acid ABC transporter, permease protein [Vibrio parahaemolyticus 16] Length = 303 Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 43/141 (30%), Positives = 80/141 (56%) Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317 G + + +S + + ++A++AEIVRSGL +V +GQ EAA +L L+ R V+ P Sbjct: 163 GPAALWENLLSGVLCIGILSSAYVAEIVRSGLASVEKGQWEAADSLSLSTWVKYRYVIAP 222 Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377 Q + +I P L Q ++L+K++S+ + ++ VG + N +G EI LI YL++ Sbjct: 223 QVLVTITPALAGQAISLIKDTSIVSLISIQEMTFVGTEMANSSGLIFEIWLIVGLTYLTI 282 Query: 378 SIMIALFMNRLNAKIALKEKK 398 + +++ +L + I ++K Sbjct: 283 CLALSMLFKKLESHILRHQRK 303 Score = 37.4 bits (85), Expect = 4.3, Method: Compositional matrix adjust. Identities = 20/51 (39%), Positives = 30/51 (58%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142 G V T L+ G + A +GTL+G GR S L+ +++++ RNIPPL Sbjct: 73 GLVATLRLSIWGGVLAFTLGTLLGIGRQSRFTLIRQPINIFIQLVRNIPPL 123 >gi|156972775|ref|YP_001443682.1| ABC amino acid transporter permease component [Vibrio harveyi ATCC BAA-1116] gi|156524369|gb|ABU69455.1| hypothetical protein VIBHAR_00440 [Vibrio harveyi ATCC BAA-1116] Length = 223 Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 58/170 (34%), Positives = 97/170 (57%), Gaps = 15/170 (8%) Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALK 241 TM+ VFS +L ++L+ R F L LYIS F G P LV + L Sbjct: 22 TMEMATWGLVFSLILSVILANI-----RVFKLPVLDQLSQLYISFFR--GTPLLVQLFL- 73 Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301 L++ P + F FI G F + I L+ + AA++AE +R+ +I + R QMEA++ Sbjct: 74 --LYYGLPQI--FPFIVGIDA---FSAAVIGLTLHFAAYMAESIRAAIIGIDRSQMEASL 126 Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 ++G+T +A R V+LPQA R +P L + +++++K++SLA +G A++++ Sbjct: 127 SVGMTTPQAMRRVILPQATRVALPSLMNYFIDMIKSTSLAFTLGVAEIMA 176 >gi|91977032|ref|YP_569691.1| amino acid ABC transporter permease [Rhodopseudomonas palustris BisB5] gi|91683488|gb|ABE39790.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Rhodopseudomonas palustris BisB5] Length = 502 Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 40/96 (41%), Positives = 62/96 (64%) Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315 F+ G+ + + I ++ + A+ AE+VR GL A+PRGQ EAA ALGL++ K T L++ Sbjct: 355 FLPGNFTIDGLLRVLIGIALFAGAYNAEVVRGGLNAIPRGQGEAASALGLSYAKTTGLIV 414 Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 LPQA+R +IP L + ++ L K++SL V DL+ Sbjct: 415 LPQALRHVIPGLVNSFIALFKDTSLVSIVALFDLLG 450 >gi|229031799|ref|ZP_04187788.1| Arginine transport system permease protein artQ [Bacillus cereus AH1271] gi|228729545|gb|EEL80533.1| Arginine transport system permease protein artQ [Bacillus cereus AH1271] Length = 197 Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 53/206 (25%), Positives = 104/206 (50%), Gaps = 29/206 (14%) Query: 193 SFVLGIVLSLF------ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246 F+LG +L+L A ++ F+ + PL+ + FG+P ++ Y++ Sbjct: 11 GFILGTLLALCKIARIRALNIAADFYTSIFRGTPLVLQLMIIYFGVPQII----GYEI-- 64 Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306 P F++ +A S + A+++E++R+G+ AV GQ EAA+ALG+ Sbjct: 65 -----------------PAFVAAVLAFSLNSGAYMSEVIRAGIQAVDNGQTEAAMALGIP 107 Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 + K R ++ PQA+++I+P L +++ L K S++ +G DL+ + +T + +E Sbjct: 108 YGKMMRNIIFPQALKNILPALVNEFATLTKESAVVTVIGATDLMRRAYIVGGETFKYLEP 167 Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKI 392 +L IY L I++ L + ++ Sbjct: 168 LLFVGLIYYMLVIILTLVGKAIEGRM 193 >gi|308070241|ref|YP_003871846.1| Probable amino-acid ABC transporter permease protein yckJ [Paenibacillus polymyxa E681] gi|305859520|gb|ADM71308.1| Probable amino-acid ABC transporter permease protein yckJ [Paenibacillus polymyxa E681] Length = 222 Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 58/201 (28%), Positives = 107/201 (53%), Gaps = 14/201 (6%) Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252 SF LG+VL+L T L+R + K + Y+ ++I G P LV + Y + + P +G Sbjct: 31 SFALGLVLALI-TALARLSKWRILKLIFGFYV--WVIRGTPLLVQL---YIIFYGLPSVG 84 Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312 T+ P F++ I + A+ +EI+R+ +I++ GQ EA +LG+T + R Sbjct: 85 -------ITLDP-FIASVIGFTLSVGAYSSEIIRAAIISIQEGQWEAGYSLGMTRWQVLR 136 Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372 ++LPQA R +PPL + +++L+K++SLA + + ++ I+ T + + + Sbjct: 137 RIVLPQASRVSVPPLANSFISLVKDTSLAATITYVEMFRTANQIVATTYEPLLVYTEAGV 196 Query: 373 IYLSLSIMIALFMNRLNAKIA 393 IYL S ++ + N L ++ Sbjct: 197 IYLLFSTILTVLQNYLEKRLG 217 >gi|256829242|ref|YP_003157970.1| polar amino acid ABC transporter, inner membrane subunit [Desulfomicrobium baculatum DSM 4028] gi|256578418|gb|ACU89554.1| polar amino acid ABC transporter, inner membrane subunit [Desulfomicrobium baculatum DSM 4028] Length = 268 Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 65/205 (31%), Positives = 110/205 (53%), Gaps = 24/205 (11%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL--IFGLPTLVLIALKYQLHFDK 248 + S VLG++ L RLSR+ K L L+ ST++ I G+P LV QL + Sbjct: 77 MLSLVLGLITGL--GRLSRN------KVLNLI-ASTYVEVIRGIPLLV------QLFYIY 121 Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308 LG+ F + P ++ CY A++ E+ R+G+ ++ +GQ EAA +LG + Sbjct: 122 YALGRLEFF--KDLPPMAAAVTAMGICY-GAYMGEVFRAGIDSIDKGQAEAARSLGFSRA 178 Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE--- 365 + V+LPQA R+I+PP+ ++++ LLK+SSL + +DL+ G +++ E Sbjct: 179 QTMMYVILPQAWRTILPPVGNEFIALLKDSSLVSILAVSDLLRRGREFASESFMYFEAYT 238 Query: 366 -IILIWMFIYLSLSIMIALFMNRLN 389 + L+++ I L LS ++ RLN Sbjct: 239 MVALVYLVITLFLSKAVSKMEQRLN 263 Score = 45.4 bits (106), Expect = 0.014, Method: Compositional matrix adjust. Identities = 24/58 (41%), Positives = 36/58 (62%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 G V TF + ++ + ++G + G GRLS NK++ I YVEV R IP LV +F++Y Sbjct: 64 GVVVTFQVTILSIMLSLVLGLITGLGRLSRNKVLNLIASTYVEVIRGIPLLVQLFYIY 121 >gi|228916790|ref|ZP_04080355.1| Arginine transport system permease protein artQ [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228929200|ref|ZP_04092227.1| Arginine transport system permease protein artQ [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228935473|ref|ZP_04098291.1| Arginine transport system permease protein artQ [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|229093213|ref|ZP_04224331.1| Arginine transport system permease protein artQ [Bacillus cereus Rock3-42] gi|229123673|ref|ZP_04252868.1| Arginine transport system permease protein artQ [Bacillus cereus 95/8201] gi|229157734|ref|ZP_04285809.1| Arginine transport system permease protein artQ [Bacillus cereus ATCC 4342] gi|229186397|ref|ZP_04313561.1| Arginine transport system permease protein artQ [Bacillus cereus BGSC 6E1] gi|228597024|gb|EEK54680.1| Arginine transport system permease protein artQ [Bacillus cereus BGSC 6E1] gi|228625691|gb|EEK82443.1| Arginine transport system permease protein artQ [Bacillus cereus ATCC 4342] gi|228659808|gb|EEL15453.1| Arginine transport system permease protein artQ [Bacillus cereus 95/8201] gi|228690187|gb|EEL43981.1| Arginine transport system permease protein artQ [Bacillus cereus Rock3-42] gi|228824225|gb|EEM70039.1| Arginine transport system permease protein artQ [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228830490|gb|EEM76100.1| Arginine transport system permease protein artQ [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228842977|gb|EEM88060.1| Arginine transport system permease protein artQ [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] Length = 222 Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 40/129 (31%), Positives = 78/129 (60%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P F++ +A S + A+++E++R+G+ AV +GQ EAA+ALG+ + K R ++ PQA+++I Sbjct: 90 PAFLAAVLAFSLNSGAYMSEVIRAGIQAVDKGQTEAAMALGIPYGKMMRNIIFPQALKNI 149 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 +P L +++ L K S++ +G DL+ + +T + +E +L IY L I++ L Sbjct: 150 LPALVNEFATLTKESAVVTVIGATDLMRRAYIVGGETFKYLEPLLFVGLIYYMLVIILTL 209 Query: 384 FMNRLNAKI 392 + ++ Sbjct: 210 VGKAIEGRM 218 >gi|170720284|ref|YP_001747972.1| polar amino acid ABC transporter inner membrane subunit [Pseudomonas putida W619] gi|169758287|gb|ACA71603.1| polar amino acid ABC transporter, inner membrane subunit [Pseudomonas putida W619] Length = 223 Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 56/204 (27%), Positives = 99/204 (48%), Gaps = 23/204 (11%) Query: 195 VLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248 VLG +L+L ++ G +++PLL + T+ +P L++ D Sbjct: 35 VLGTLLALMRLSSNKLLSNIAGAYVNYFRSIPLLLVITWFYLAVP----FVLRWITGEDT 90 Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308 PV F S +A + AA+ EIVR+G+ ++ +GQM AA ALG+ + Sbjct: 91 PV-------------GAFTSCVVAFMMFEAAYFCEIVRAGVQSISKGQMGAAQALGMNYA 137 Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368 + RL++LPQA R + P L Q + L +++SL VG D ++ + + G++ E ++ Sbjct: 138 QTMRLIILPQAFRKMTPLLLQQSIILFQDTSLVYTVGLVDFLNSARSNGDIIGRSHEFLI 197 Query: 369 IWMFIYLSLSIMIALFMNRLNAKI 392 +Y +S + + RL +I Sbjct: 198 FAGVVYFLISFSASWLVKRLQKRI 221 Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust. Identities = 30/69 (43%), Positives = 42/69 (60%) Query: 88 AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147 A+ G V T L G+I ++GTL+ RLS+NKL++ I YV FR+IP L+VI + Sbjct: 14 ALWEGMVMTLKLMVMGVIGGIVLGTLLALMRLSSNKLLSNIAGAYVNYFRSIPLLLVITW 73 Query: 148 LYKSVLSVL 156 Y +V VL Sbjct: 74 FYLAVPFVL 82 >gi|317486285|ref|ZP_07945117.1| His/Glu/Gln/Arg/opine family amino ABC transporter [Bilophila wadsworthia 3_1_6] gi|316922455|gb|EFV43709.1| His/Glu/Gln/Arg/opine family amino ABC transporter [Bilophila wadsworthia 3_1_6] Length = 233 Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 55/181 (30%), Positives = 90/181 (49%), Gaps = 23/181 (12%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 + PL+ FL FGLP +AL G + P+ + IA+ Sbjct: 65 RGTPLIVQVMFLYFGLP----LAL------------------GMRIPPDVAGV-IAIGVN 101 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 + A+IAEIVR + ++ +GQ EA + GLT + ++ PQA R +IPPLT+Q + LK Sbjct: 102 SGAYIAEIVRGAIQSIDKGQTEAGRSTGLTQAQTMLYIIWPQAFRRMIPPLTNQCIISLK 161 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 ++SL V +G +L G II +A E+ L YL++++ I+ + K+ + Sbjct: 162 DTSLLVVIGVGELTRQGQEIIAVNFRAFEVWLTVAIFYLAMTLSISAVLRYYERKLMIGR 221 Query: 397 K 397 + Sbjct: 222 R 222 >gi|312961373|ref|ZP_07775878.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Pseudomonas fluorescens WH6] gi|311285031|gb|EFQ63607.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Pseudomonas fluorescens WH6] Length = 220 Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 59/207 (28%), Positives = 110/207 (53%), Gaps = 20/207 (9%) Query: 193 SFVLGIVLSLFAT--RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 S +G V+ L LSRH + + +Y++ ++ P LVLI L Y F P Sbjct: 31 SIAIGCVIGLLMAFAMLSRH---RALRVFASVYVT--VVRNTPILVLILLIY---FALPS 82 Query: 251 LG-QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309 LG + + I P F+ I LS Y A++ E+ R+GL+ +P+G EA +A+GL + Sbjct: 83 LGIRLDKI------PSFI---ITLSLYAGAYLTEVFRAGLLNIPKGLREAGLAIGLGEWR 133 Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369 + +P +R+++P L++ +++L K++SLA A+ +L I ++ + IE L+ Sbjct: 134 IRAYITVPVMLRNVLPALSNNFISLFKDTSLAAAIAVPELTYYARKINVESYRVIETWLV 193 Query: 370 WMFIYLSLSIMIALFMNRLNAKIALKE 396 +Y++ +IA+ + L ++A++ Sbjct: 194 TTALYVAACYLIAMLLRYLEQRLAIRR 220 >gi|229826278|ref|ZP_04452347.1| hypothetical protein GCWU000182_01650 [Abiotrophia defectiva ATCC 49176] gi|229789148|gb|EEP25262.1| hypothetical protein GCWU000182_01650 [Abiotrophia defectiva ATCC 49176] Length = 224 Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 47/130 (36%), Positives = 80/130 (61%), Gaps = 4/130 (3%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 +F+S+ +AL +AA+++E++RSG+ AV +GQ EAA +LGL R+ ++LPQA+R I+ Sbjct: 92 DFVSVTVALILNSAAYVSEVIRSGIEAVDKGQTEAARSLGLNKRQTMFKIVLPQAIRYIL 151 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY----LSLSIM 380 P L ++++ ++K +SLA DL++ I T IE ++I IY +LS Sbjct: 152 PALGNEFIMMIKETSLASTFFVGDLMTRYQVITGATFLVIEPLIIIGVIYFILTFTLSRG 211 Query: 381 IALFMNRLNA 390 +A+ R+ A Sbjct: 212 VAVLERRMKA 221 >gi|261404398|ref|YP_003240639.1| polar amino acid ABC transporter inner membrane subunit [Paenibacillus sp. Y412MC10] gi|329929701|ref|ZP_08283387.1| putative glutamine ABC transporter, permease protein GlnM [Paenibacillus sp. HGF5] gi|261280861|gb|ACX62832.1| polar amino acid ABC transporter, inner membrane subunit [Paenibacillus sp. Y412MC10] gi|328935918|gb|EGG32377.1| putative glutamine ABC transporter, permease protein GlnM [Paenibacillus sp. HGF5] Length = 219 Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 49/135 (36%), Positives = 80/135 (59%), Gaps = 1/135 (0%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G V P F S + L YTAAFIAE +R+G+ AVP GQ EAA + GL++ + R ++LPQ Sbjct: 83 GIPVDP-FTSGTLGLMVYTAAFIAEAIRAGIQAVPSGQSEAARSSGLSYIQNMRYIILPQ 141 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378 A++ ++P + +Q +NL+KNSS+ + DL+ I T + I + YL L+ Sbjct: 142 AVKIVLPAIGNQLINLVKNSSVLGVIAGLDLMYYADLINLSTFKGIPVYTFVALFYLLLT 201 Query: 379 IMIALFMNRLNAKIA 393 + ++L ++ + + A Sbjct: 202 VPLSLAVHYMERRFA 216 >gi|21283528|ref|NP_646616.1| hypothetical protein MW1799 [Staphylococcus aureus subsp. aureus MW2] gi|49486677|ref|YP_043898.1| putative extracellular glutamine-binding protein [Staphylococcus aureus subsp. aureus MSSA476] gi|57650648|ref|YP_186741.1| amino acid ABC transporter, permease/substrate-binding protein [Staphylococcus aureus subsp. aureus COL] gi|87161641|ref|YP_494491.1| amino acid ABC transporter, permease/substrate-binding protein [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|88195682|ref|YP_500488.1| ABC transporter permease [Staphylococcus aureus subsp. aureus NCTC 8325] gi|151221962|ref|YP_001332784.1| extracellular glutamine-binding protein [Staphylococcus aureus subsp. aureus str. Newman] gi|161510076|ref|YP_001575735.1| amino acid ABC transporter ATP-binding protein [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|221142158|ref|ZP_03566651.1| amino acid ABC transporter ATP-binding protein [Staphylococcus aureus subsp. aureus str. JKD6009] gi|253732516|ref|ZP_04866681.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|258452651|ref|ZP_05700650.1| amino acid ABC transporter [Staphylococcus aureus A5948] gi|282924191|ref|ZP_06331866.1| extracellular glutamine-binding protein [Staphylococcus aureus A9765] gi|284024905|ref|ZP_06379303.1| amino acid ABC transporter, permease/substrate-binding protein [Staphylococcus aureus subsp. aureus 132] gi|294850288|ref|ZP_06791023.1| extracellular glutamine-binding protein [Staphylococcus aureus A9754] gi|297207424|ref|ZP_06923861.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Staphylococcus aureus subsp. aureus ATCC 51811] gi|300911508|ref|ZP_07128953.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Staphylococcus aureus subsp. aureus TCH70] gi|304380538|ref|ZP_07363213.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|21204969|dbj|BAB95664.1| MW1799 [Staphylococcus aureus subsp. aureus MW2] gi|49245120|emb|CAG43586.1| putative extracellular glutamine-binding protein [Staphylococcus aureus subsp. aureus MSSA476] gi|57284834|gb|AAW36928.1| amino acid ABC transporter, permease/substrate-binding protein [Staphylococcus aureus subsp. aureus COL] gi|87127615|gb|ABD22129.1| amino acid ABC transporter, permease/substrate-binding protein [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|87203240|gb|ABD31050.1| ABC transporter, permease protein, putative [Staphylococcus aureus subsp. aureus NCTC 8325] gi|150374762|dbj|BAF68022.1| extracellular glutamine-binding protein [Staphylococcus aureus subsp. aureus str. Newman] gi|160368885|gb|ABX29856.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|253723797|gb|EES92526.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|257859626|gb|EEV82475.1| amino acid ABC transporter [Staphylococcus aureus A5948] gi|269941329|emb|CBI49726.1| putative extracellular glutamine-bindingprotein [Staphylococcus aureus subsp. aureus TW20] gi|282592986|gb|EFB97988.1| extracellular glutamine-binding protein [Staphylococcus aureus A9765] gi|294822904|gb|EFG39338.1| extracellular glutamine-binding protein [Staphylococcus aureus A9754] gi|296887887|gb|EFH26783.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Staphylococcus aureus subsp. aureus ATCC 51811] gi|300887140|gb|EFK82340.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Staphylococcus aureus subsp. aureus TCH70] gi|302751667|gb|ADL65844.1| polar amino acid ABC transporter, inner membrane subunit [Staphylococcus aureus subsp. aureus str. JKD6008] gi|304340867|gb|EFM06792.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|315196792|gb|EFU27136.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Staphylococcus aureus subsp. aureus CGS01] gi|320141291|gb|EFW33136.1| ABC transporter, permease protein [Staphylococcus aureus subsp. aureus MRSA131] gi|329314534|gb|AEB88947.1| Polar amino acid ABC transporter, inner membrane subunit [Staphylococcus aureus subsp. aureus T0131] gi|329729517|gb|EGG65919.1| ABC transporter, permease protein [Staphylococcus aureus subsp. aureus 21189] Length = 485 Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 34/80 (42%), Positives = 61/80 (76%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IAL ++A+IAEI+R+G+ AV +GQMEAA +LGL +R+ + V++PQA+++I+P L ++ Sbjct: 360 IALVINSSAYIAEIIRAGINAVDKGQMEAARSLGLNYRQTMKSVIMPQAIKNILPALGNE 419 Query: 331 YLNLLKNSSLAVAVGFADLV 350 ++ L+K SS+ +G +++ Sbjct: 420 FVTLIKESSIVSTIGVGEIM 439 Score = 44.3 bits (103), Expect = 0.036, Method: Compositional matrix adjust. Identities = 21/67 (31%), Positives = 37/67 (55%) Query: 83 SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142 S Y + L G T ++ G+ +I+G V +LS K+++WI +Y+E+ R P L Sbjct: 275 SKYGSFFLKGIKITILISLIGVALGSILGAFVALMKLSKIKIISWIASIYIEILRGTPML 334 Query: 143 VVIFFLY 149 V +F ++ Sbjct: 335 VQVFIVF 341 >gi|110347318|ref|YP_666135.1| polar amino acid ABC transporter, inner membrane subunit [Mesorhizobium sp. BNC1] gi|110287494|gb|ABG65552.1| amino acid ABC transporter membrane protein 1, PAAT family [Chelativorans sp. BNC1] Length = 232 Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 59/166 (35%), Positives = 88/166 (53%), Gaps = 16/166 (9%) Query: 233 PTLVLIALKYQLHFDKPVLGQ--FNFIGGSTVSP------------EFMSLYIALSCYTA 278 P LIAL + H + P+L Q F + G S++ P EF+ +AL YTA Sbjct: 54 PLSWLIALYVEYHRNVPLLVQLLFWYFGISSLFPDGLNDFINQHNTEFIFALLALVLYTA 113 Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338 A+++E +RSGL A+ + Q EAA A+G + +LPQ R +PPL +Q L L K + Sbjct: 114 AYMSEDMRSGLRAISKTQFEAARAIGFGFVQTMTYAILPQVWRLSLPPLVNQTLILFKGT 173 Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL--SLSIMIA 382 SLA ++G A+L I + T + E + +YL SL++M A Sbjct: 174 SLAASIGVAELTFQARQIESITFRVFESFFVVSLLYLAGSLTLMFA 219 >gi|315283402|ref|ZP_07871606.1| L-cystine transport system permease protein TcyL [Listeria marthii FSL S4-120] gi|313612951|gb|EFR86889.1| L-cystine transport system permease protein TcyL [Listeria marthii FSL S4-120] Length = 238 Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 62/193 (32%), Positives = 102/193 (52%), Gaps = 24/193 (12%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 +F F+LG++LSL R + +YIS F G P +V + + + + P Sbjct: 33 IFGFILGVILSL-----PRIYKIPVLNQFARVYISFFR--GTPIMVQL---FIVFYGIPA 82 Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCY---TAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307 L I S + P LY A++ Y +AA IAE++R+G+ +V GQ EAA ++GL Sbjct: 83 LSSVFGIDLSQMDP----LYAAIATYALSSAATIAEVIRAGVNSVDAGQAEAAYSVGLNG 138 Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367 R+ ++LPQA+ +P + + LK++SLA ++G D+ G T+I + A+E Sbjct: 139 RQTFLRIILPQALYQALPNFGNLVIGYLKDTSLAFSIGVMDMSGRGQTLITLSNHALE-- 196 Query: 368 LIWMFIYLSLSIM 380 +Y+SLSI+ Sbjct: 197 -----VYISLSII 204 >gi|302333524|gb|ADL23717.1| amino acid ABC transporter protein [Staphylococcus aureus subsp. aureus JKD6159] Length = 485 Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 34/80 (42%), Positives = 61/80 (76%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IAL ++A+IAEI+R+G+ AV +GQMEAA +LGL +R+ + V++PQA+++I+P L ++ Sbjct: 360 IALVINSSAYIAEIIRAGINAVDKGQMEAARSLGLNYRQTMKSVIMPQAIKNILPALGNE 419 Query: 331 YLNLLKNSSLAVAVGFADLV 350 ++ L+K SS+ +G +++ Sbjct: 420 FVTLIKESSIVSTIGVGEIM 439 Score = 44.3 bits (103), Expect = 0.034, Method: Compositional matrix adjust. Identities = 21/67 (31%), Positives = 37/67 (55%) Query: 83 SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142 S Y + L G T ++ G+ +I+G V +LS K+++WI +Y+E+ R P L Sbjct: 275 SKYGSFFLKGIKITILISLIGVALGSILGAFVALMKLSKIKIISWIASIYIEILRGTPML 334 Query: 143 VVIFFLY 149 V +F ++ Sbjct: 335 VQVFIVF 341 >gi|42820805|emb|CAE02641.1| YckJ protein [Bacillus amyloliquefaciens FZB42] Length = 168 Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 51/139 (36%), Positives = 80/139 (57%), Gaps = 8/139 (5%) Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320 T+ P F S IA S A+ +EI+R+ + +VP+GQ EA +G+T+RK V+LPQA Sbjct: 31 TLDP-FPSAVIAFSLNVGAYASEIIRASISSVPKGQWEAGYTIGMTYRKTLFRVILPQAF 89 Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI------WMFIY 374 R IPPL++ +++L+K++SLA + A+L I Q I +I I W+ + Sbjct: 90 RVSIPPLSNTFISLIKDTSLASQILVAELFRKAQEIGAQNLDQILVIYIEAAFIYWIICF 149 Query: 375 LSLSIMIALFMNRLNAKIA 393 L LSI+ + RL+ +A Sbjct: 150 L-LSIVQHVIERRLDRYVA 167 >gi|325519635|gb|EGC98978.1| hypothetical protein B1M_38906 [Burkholderia sp. TJI49] Length = 220 Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 66/215 (30%), Positives = 112/215 (52%), Gaps = 22/215 (10%) Query: 188 KIFVFSFVLGIVLSLFAT--RLSRH--FHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243 ++ + + V G+V+ L A RLSRH + G YI +LI P LV + + Sbjct: 23 QLTLLATVAGLVIGLAAALGRLSRHRVLRDAMGA-----YI--WLIRSTPLLVQL---FI 72 Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 ++F P QF G +SP F S I L+ A+ AE +R+G++A+P GQ+EA+ +L Sbjct: 73 IYFGLP---QF----GIELSP-FTSGVIGLALNVGAYNAETIRAGILAIPHGQIEASRSL 124 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363 G + RLV+LPQA++ I+PPL + + L K++SL + A+L ++ T + Sbjct: 125 GFGAARTMRLVVLPQALKLIVPPLGNNLIILTKDTSLVSTITLAELFMRTQQLVGATFKP 184 Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 E+ IY L+ ++ + + ++ LK + Sbjct: 185 FELYFACAMIYALLTTGTSVLLRQFEQRLILKGGR 219 >gi|293381104|ref|ZP_06627121.1| ABC transporter, permease protein [Lactobacillus crispatus 214-1] gi|290922316|gb|EFD99301.1| ABC transporter, permease protein [Lactobacillus crispatus 214-1] Length = 526 Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 42/116 (36%), Positives = 73/116 (62%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I +S T A++AE++R G+I+ P GQ EAA ALG+TH + ++LPQA+R+ +P +T++ Sbjct: 380 IIVSINTGAYLAEVIRGGIISTPEGQFEAASALGMTHNQRMWHIILPQAIRNCLPSITNE 439 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386 ++ +K++S+ + ++L VG TI +Q+ + L+ IYL L+ I N Sbjct: 440 FIVNIKDTSVLSIISVSELFFVGTTIASQSFKFFPTYLMISAIYLILTFTITRIFN 495 Score = 36.6 bits (83), Expect = 6.7, Method: Compositional matrix adjust. Identities = 29/93 (31%), Positives = 39/93 (41%), Gaps = 10/93 (10%) Query: 67 RAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVG----------A 116 +AG E + T+ Y I+ G T LA G I IG LVG Sbjct: 269 KAGNETKKENWLVTTWKQYGGMIMSGIGMTLLLALVGTIVGFFIGLLVGIIRTIPTPTTR 328 Query: 117 GRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 G+ +V W+ VYVE+FR P +V +Y Sbjct: 329 GKRWTLNVVKWLLSVYVEIFRGTPMMVQAAVIY 361 >gi|227431441|ref|ZP_03913490.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] gi|227352807|gb|EEJ42984.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] Length = 219 Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 61/209 (29%), Positives = 101/209 (48%), Gaps = 35/209 (16%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPTLVLIALKYQL 244 + SF+ G ++ + +F + G + LPLL I F+ F LP K + Sbjct: 34 ILSFIAGSIIGIVQFERIPYFSKFVGTINNIIRNLPLLLIIFFVYFVLP-------KLGI 86 Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304 H P F + +A+S + ++ +AEIVR GL ++ GQ E A A G Sbjct: 87 HL-----------------PIFWATVVAMSTFESSMLAEIVRGGLESIDEGQFEGARANG 129 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ-- 362 LT+ + ++LPQA + +IPP+ SQ ++L+K++SLA+ + A++ G I Q Sbjct: 130 LTNIQTMIYIVLPQAYKKMIPPIISQLISLVKDTSLAMGIVLAEMTYRGQIIYAQNSTYI 189 Query: 363 ---AIEIILIWMFIYLSLSIMIALFMNRL 388 I I L++ + LS++ F RL Sbjct: 190 IPVLIAITLVYFLLNYGLSLIAKWFDRRL 218 >gi|322381529|ref|ZP_08055508.1| glutamine ABC transporter-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321154536|gb|EFX46833.1| glutamine ABC transporter-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 202 Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 56/170 (32%), Positives = 97/170 (57%), Gaps = 20/170 (11%) Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240 +T+ A V SF++G +L + R+ L LL++ +I LP L++I Sbjct: 6 ITLWMAAVSIVLSFIIGSILGIL-----RYTRIPVVSQLVLLWVE--MIRNLPLLLII-- 56 Query: 241 KYQLHFDKPVLG-QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299 + + F P +G +F+ I S IAL+ + +A I+EI+R GL ++ +GQ+EA Sbjct: 57 -FFVRFALPEVGIKFDVIT---------SAIIALTVFESAMISEIIRGGLNSIEKGQIEA 106 Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349 A + GLT+ + ++ PQA++ ++PP SQ+++LLK++SLAV + DL Sbjct: 107 ARSSGLTYIQTLWHIIFPQAVKRMVPPTVSQFISLLKDTSLAVIISAPDL 156 Score = 39.7 bits (91), Expect = 0.78, Method: Compositional matrix adjust. Identities = 20/57 (35%), Positives = 38/57 (66%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 GF T W+A ++ + IIG+++G R + +V+ + ++VE+ RN+P L++IFF+ Sbjct: 3 GFGITLWMAAVSIVLSFIIGSILGILRYTRIPVVSQLVLLWVEMIRNLPLLLIIFFV 59 >gi|319441562|ref|ZP_07990718.1| glutamate ABC transport system, permease protein [Corynebacterium variabile DSM 44702] Length = 313 Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 62/216 (28%), Positives = 112/216 (51%), Gaps = 21/216 (9%) Query: 179 PTLTMDTNAKIF--VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV 236 P L A + + + ++G VL + RLS H ++ + + + + F +P LV Sbjct: 68 PGLWATVKAAVLSIILALIVGAVLGI--GRLSTH---RSIRWICSIIVEVFR--SIPVLV 120 Query: 237 LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296 L+ Y + G++ + + F ++ L+ Y + IAE +RSG+ ++P+GQ Sbjct: 121 LMLFAYT------IFGEWGLFPSTQLG--FAAVVFGLTMYNGSVIAETLRSGIESLPKGQ 172 Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356 EAA ALGL+ + R +LLPQA+ +++P + SQ + LK+S+L +GF ++V G Sbjct: 173 SEAAYALGLSWGQTMRKILLPQAVAAMMPAIVSQMVIALKDSALGYMIGFVEVVRSG--- 229 Query: 357 INQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 Q G+ IL + + ++ I+I + RL +I Sbjct: 230 -RQLGEYYGSILPSLLVVAAIMIIINFGLTRLAERI 264 Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 31/71 (43%), Positives = 45/71 (63%) Query: 79 YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138 +T SS+ T I+ G T A +I A I+G ++G GRLS ++ + WIC + VEVFR+ Sbjct: 56 FTKGSSWTTYIIPGLWATVKAAVLSIILALIVGAVLGIGRLSTHRSIRWICSIIVEVFRS 115 Query: 139 IPPLVVIFFLY 149 IP LV++ F Y Sbjct: 116 IPVLVLMLFAY 126 >gi|104780399|ref|YP_606897.1| glutamate-aspartate ABC transporter permease [Pseudomonas entomophila L48] gi|95109386|emb|CAK14086.1| Glutamate-aspartate ABC transporter, permease protein [Pseudomonas entomophila L48] Length = 223 Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 50/176 (28%), Positives = 90/176 (51%), Gaps = 17/176 (9%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 +++PLL + T+ +P L++ D PV F S +A + Sbjct: 63 RSIPLLLVITWFYLAVP----FVLRWITGEDTPV-------------GAFTSCVVAFMMF 105 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 AA+ EIVR+G+ ++ +GQM AA ALG+++ + RL++LPQA R + P L Q + L + Sbjct: 106 EAAYFCEIVRAGVQSISKGQMGAAQALGMSYGQCMRLIILPQAFRKMTPLLLQQSIILFQ 165 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 ++SL VG D ++ + + G++ E ++ +Y +S + + RL +I Sbjct: 166 DTSLVYTVGLIDFLNSARSNGDIIGRSHEFLIFAGVVYFLISFSASWLVKRLQKRI 221 Score = 43.9 bits (102), Expect = 0.049, Method: Compositional matrix adjust. Identities = 29/69 (42%), Positives = 41/69 (59%) Query: 88 AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147 A+ G V T L G++ +GT++ RLS+NKL+A I YV FR+IP L+VI + Sbjct: 14 ALWDGMVLTLQLMVMGVVGGIALGTILALMRLSSNKLLANIAGTYVNYFRSIPLLLVITW 73 Query: 148 LYKSVLSVL 156 Y +V VL Sbjct: 74 FYLAVPFVL 82 >gi|49183380|ref|YP_026632.1| amino acid ABC transporter permease [Bacillus anthracis str. Sterne] gi|49177307|gb|AAT52683.1| amino acid ABC transproter, permease [Bacillus anthracis str. Sterne] Length = 291 Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 74/223 (33%), Positives = 116/223 (52%), Gaps = 19/223 (8%) Query: 177 SFPTLTMDT--NAKIFVFSFVLGIVLSL-FATRLSRHFHEKTGKALPLLYISTFLIFGLP 233 ++PTL T ++ + S VLG ++ L FA R + K ++ +YI+ +I G P Sbjct: 69 TYPTLLKATIVTLQLTLTSLVLGSLIGLLFA--FFRISNNKVLNSIAHVYIA--IIRGTP 124 Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293 +V IA+ Y F +P F + IAL+ + A+I EI R + +V Sbjct: 125 LIVQIAILY-----------FGITSVVVFTP-FWAGAIALAIHNGAYITEIFRGSIQSVD 172 Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353 RGQMEAA +LG+ + A R ++LPQA R +PPL +Q++ LK+SSL VG A+L G Sbjct: 173 RGQMEAARSLGMPYPLAMRRIVLPQAFRQSLPPLGNQFIIGLKDSSLVAYVGMAELWGSG 232 Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 +I Q ++ +I YL L ++ +N L ++ KE Sbjct: 233 LSIAAGNFQQLDTYIIVGLYYLVLVLLFTYLVNLLEKRLQRKE 275 Score = 36.6 bits (83), Expect = 7.3, Method: Compositional matrix adjust. Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 1/74 (1%) Query: 83 SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142 S+Y T +L + T L + ++ ++IG L R+S NK++ I VY+ + R P + Sbjct: 68 STYPT-LLKATIVTLQLTLTSLVLGSLIGLLFAFFRISNNKVLNSIAHVYIAIIRGTPLI 126 Query: 143 VVIFFLYKSVLSVL 156 V I LY + SV+ Sbjct: 127 VQIAILYFGITSVV 140 >gi|51243942|ref|YP_063826.1| glutamine transport system permease protein (GlnP) [Desulfotalea psychrophila LSv54] gi|50874979|emb|CAG34819.1| related to glutamine transport system permease protein (GlnP) [Desulfotalea psychrophila LSv54] Length = 299 Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 50/154 (32%), Positives = 88/154 (57%), Gaps = 11/154 (7%) Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 L F KP T++P F S + L+ + A+I EIVR+G+ AV RGQ EA+ AL Sbjct: 151 LFFSKP----------ETITP-FFSGILTLALFQGAYIGEIVRAGIEAVDRGQWEASSAL 199 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363 GLT R V+LPQA+R+++P L ++++N +K SS+ + +L G ++ + Sbjct: 200 GLTKWTQLRSVILPQAVRTMLPTLANEFINTIKWSSIVSIISIQELTFQGMQVMASSQAT 259 Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 +E+ LI +YL + + ++ ++ + +IA ++ Sbjct: 260 LEVWLIITSMYLIICLFLSYIVHCIEKRIADPDR 293 Score = 44.7 bits (104), Expect = 0.030, Method: Compositional matrix adjust. Identities = 34/118 (28%), Positives = 55/118 (46%), Gaps = 15/118 (12%) Query: 58 SLGIGFLSERAGFEID-----QGIVPY------TSDSSYATAILVGFVNTFWLAFSGMIP 106 S G+ FL R + ++ Q ++PY + + +L G T L+ MI Sbjct: 19 STGLAFLLYRLVWGMNYHWRWQAVLPYIYYINPQTGEGRPSVLLEGLFTTIRLSIWAMIF 78 Query: 107 ATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY----KSVLSVLPIPD 160 AT+IG +G R S+ + Y+ + RN PPLV+IF Y + ++LP+ D Sbjct: 79 ATLIGFSMGIMRTSSRLFFRLVGTTYITLIRNTPPLVLIFIFYYFISDQLFALLPLDD 136 >gi|317153460|ref|YP_004121508.1| polar amino acid ABC transporter inner membrane subunit [Desulfovibrio aespoeensis Aspo-2] gi|316943711|gb|ADU62762.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio aespoeensis Aspo-2] Length = 273 Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 44/128 (34%), Positives = 77/128 (60%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + IALS + A+ +EI+R+G+ ++ GQ EAA +LG++ R ++LPQA+R ++P Sbjct: 142 FWAAIIALSLFEGAYASEILRAGISSIASGQWEAAQSLGMSPYAMYRHIILPQAVRRVLP 201 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PLTSQ ++L+K+S+L + DL G I +T EI +YL++++ ++ + Sbjct: 202 PLTSQAVSLVKDSALVSTIAIMDLTQQGRMIDAETFLTFEIWFTVAAVYLAVTLALSGTV 261 Query: 386 NRLNAKIA 393 L + A Sbjct: 262 RLLERRYA 269 >gi|229019366|ref|ZP_04176190.1| Arginine transport system permease protein artQ [Bacillus cereus AH1273] gi|229025612|ref|ZP_04182019.1| Arginine transport system permease protein artQ [Bacillus cereus AH1272] gi|228735706|gb|EEL86294.1| Arginine transport system permease protein artQ [Bacillus cereus AH1272] gi|228741934|gb|EEL92110.1| Arginine transport system permease protein artQ [Bacillus cereus AH1273] Length = 225 Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 40/129 (31%), Positives = 78/129 (60%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P F++ +A S + A+++E++R+G+ AV +GQ EAA+ALG+ + K R ++ PQA+++I Sbjct: 93 PAFLAAVLAFSLNSGAYMSEVIRAGIQAVDKGQTEAAMALGIPYSKMMRNIIFPQALKNI 152 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 +P L +++ L K S++ +G DL+ + +T + +E +L IY L I++ L Sbjct: 153 LPALVNEFATLTKESAVVTVIGATDLMRRAYIVGGETFKYLEPLLFVGLIYYILVIILTL 212 Query: 384 FMNRLNAKI 392 + ++ Sbjct: 213 VGKAIEGRM 221 >gi|222081206|ref|YP_002540569.1| amino acid ABC transporter [Agrobacterium radiobacter K84] gi|221725885|gb|ACM28974.1| amino acid ABC transporter [Agrobacterium radiobacter K84] Length = 235 Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 46/111 (41%), Positives = 68/111 (61%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I L AA+ +E +RSGL +V GQMEAA ALG + A R V++PQ +R+ +P L + Sbjct: 106 IGLGLCQAAYFSEDLRSGLRSVNPGQMEAARALGHGYISAMRFVMIPQGIRNALPALINH 165 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 ++L +NSSLAVA+G A+L + N + E L+ +YL+ S+MI Sbjct: 166 SVSLFQNSSLAVAIGVAELTYAVKEVENLSFLTFETYLLATVLYLAFSLMI 216 >gi|86359584|ref|YP_471476.1| amino acid ABC transporter permease [Rhizobium etli CFN 42] gi|86283686|gb|ABC92749.1| probable amino acid ABC transporter, permease protein [Rhizobium etli CFN 42] Length = 219 Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 58/203 (28%), Positives = 108/203 (53%), Gaps = 14/203 (6%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 + SF G++L L T ++R F A+ Y+ ++I G P LV + + + + P Sbjct: 21 LLSFTFGLILGLI-TAIARLFSPAPVAAIARFYV--WVIRGTPLLVQL---FVIFYGLPS 74 Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 +G + F + I + A+ +EI+R+ + +VP+GQ EAA ++G++ R+A Sbjct: 75 VG--------ILLDAFPAALIGFTLNIGAYSSEIIRAVISSVPKGQWEAAYSIGMSWRQA 126 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370 +LPQA R +PPL++ +++L+K++SLA A+ +L I+ T + + + + Sbjct: 127 MSRTILPQAGRVAVPPLSNTFISLVKDTSLAAAITVPELFQAAQRIVATTYEPLILYIEA 186 Query: 371 MFIYLSLSIMIALFMNRLNAKIA 393 IYL LS +++ RL + A Sbjct: 187 ALIYLVLSSILSQLQVRLERRFA 209 >gi|116671680|ref|YP_832613.1| polar amino acid ABC transporter inner membrane subunit [Arthrobacter sp. FB24] gi|116611789|gb|ABK04513.1| amino acid ABC transporter membrane protein, PAAT family [Arthrobacter sp. FB24] Length = 263 Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 45/131 (34%), Positives = 78/131 (59%), Gaps = 4/131 (3%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I+L AA+IAE +R+GL AVP+GQ+EAA +LG+ +A +++PQA R ++PPLT++ Sbjct: 133 ISLGMVAAAYIAETLRAGLQAVPKGQLEAARSLGMPQWRAMVSIVIPQAFRIVLPPLTNE 192 Query: 331 YLNLLKNSSLAVAVGFA----DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386 + L K+SSL +G +L G I+ G + +L+ YL ++I ++L Sbjct: 193 VILLTKDSSLIYVLGLTASQYELTKFGRDGISSLGAGLTPLLVAGAFYLVITIPLSLLAR 252 Query: 387 RLNAKIALKEK 397 + ++ A ++ Sbjct: 253 KFESRSARTKR 263 >gi|302130067|ref|ZP_07256057.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tomato NCPPB 1108] Length = 277 Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 46/119 (38%), Positives = 74/119 (62%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IALS A+++EI R+G+I V GQ EAA+AL L + V LPQAMR+IIPP T+Q Sbjct: 148 IALSLNYGAYLSEIFRAGIIGVAAGQREAALALALRPTQIFWRVTLPQAMRTIIPPTTNQ 207 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 ++++LK+SSL +G +++ + + + + IE++ +Y +SI + L +RL Sbjct: 208 FISMLKDSSLISVMGVWEVMFLAQSYGRSSYRYIEMLTTAAVLYWIMSIGLELLQSRLE 266 >gi|321312472|ref|YP_004204759.1| sulfur-containing amino acid ABC transporter permease [Bacillus subtilis BSn5] gi|320018746|gb|ADV93732.1| sulfur-containing amino acid ABC transporter (permease) [Bacillus subtilis BSn5] Length = 239 Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 65/233 (27%), Positives = 116/233 (49%), Gaps = 15/233 (6%) Query: 171 LNNRGLSFPTLT--MDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL 228 +N G PTLT + I S + G VL LF L R ++ L +YIS F Sbjct: 7 MNMIGDFVPTLTAYLPVTLYILTLSLLFGFVLGLFLA-LPRIYNIPIVNQLAKVYISFFR 65 Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA---FIAEIV 285 G P +V + + + + P L I S + P Y A++ Y + AEI+ Sbjct: 66 --GTPIMVQL---FIVFYGIPALTGLIGIDTSKMDP----FYAAVATYALSNAAAAAEII 116 Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345 R+G+ +V +GQ EAA ++GL+ +A R ++LPQA+ P + + ++ LK++SLA ++G Sbjct: 117 RAGVGSVDKGQTEAAYSIGLSGSQAFRRIVLPQALVQAFPNMGNMVISSLKDTSLAFSIG 176 Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 D+ G T+I + ++E+ + +Y +++++ F +I + + Sbjct: 177 VMDMSGRGQTLITSSNHSLEVYIALSIVYYAVAVLFEWFFRVAEKRIKKNQTR 229 >gi|28210297|ref|NP_781241.1| cystine/glutamine permease protein [Clostridium tetani E88] gi|28202733|gb|AAO35178.1| cystine/glutamine permease protein [Clostridium tetani E88] Length = 216 Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 40/125 (32%), Positives = 79/125 (63%), Gaps = 1/125 (0%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I LS + A++AEI+R G+I+V +GQ EA ALG ++ + + ++LPQA+R ++PP ++ Sbjct: 91 IGLSLNSGAYMAEIIRGGIISVDKGQFEACKALGFSYGQTMKRIILPQAVRVLVPPTGNE 150 Query: 331 YLNLLKNSSL-AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 ++ +LK++SL +V G +++ V + T + +E L+ IYL L+ + + ++ Sbjct: 151 FITILKDTSLVSVLGGMEEVMRVAQQSYSATFRPLEPFLVAACIYLILTTVFTIVFGKIE 210 Query: 390 AKIAL 394 K+++ Sbjct: 211 KKVSV 215 >gi|16801504|ref|NP_471772.1| hypothetical protein lin2442 [Listeria innocua Clip11262] gi|16414964|emb|CAC97669.1| lin2442 [Listeria innocua Clip11262] Length = 238 Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 62/193 (32%), Positives = 102/193 (52%), Gaps = 24/193 (12%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 +F F+LG++LSL R + +YIS F G P +V + + + + P Sbjct: 33 IFGFILGVILSL-----PRIYQIPVLNQFARVYISFFR--GTPIMVQL---FIVFYGIPA 82 Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCY---TAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307 L I S + P LY A++ Y +AA IAE++R+G+ +V GQ EAA ++GL Sbjct: 83 LSGVFGIDLSQMDP----LYAAIATYALSSAATIAEVIRAGVNSVDAGQAEAAYSVGLNG 138 Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367 R+ ++LPQA+ +P + + LK++SLA ++G D+ G T+I + A+E Sbjct: 139 RQTFLRIILPQALYQALPNFGNLVIGYLKDTSLAFSIGVMDMSGRGQTLITLSNHALE-- 196 Query: 368 LIWMFIYLSLSIM 380 +Y+SLSI+ Sbjct: 197 -----VYISLSII 204 >gi|148546353|ref|YP_001266455.1| polar amino acid ABC transporter inner membrane subunit [Pseudomonas putida F1] gi|148510411|gb|ABQ77271.1| polar amino acid ABC transporter, inner membrane subunit [Pseudomonas putida F1] Length = 223 Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 57/204 (27%), Positives = 99/204 (48%), Gaps = 23/204 (11%) Query: 195 VLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248 VLG +L+L S+ G +++PLL + T+ +P L++ D Sbjct: 35 VLGTILALMRLSSSKLLSNLAGAYVNYFRSIPLLLVITWFYLAVP----FVLRWITGEDT 90 Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308 PV F S +A + AA+ EIVR+G+ ++ +GQM AA ALG+ + Sbjct: 91 PV-------------GAFTSCVVAFMMFEAAYFCEIVRAGVQSISKGQMGAAQALGMNYA 137 Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368 + RL++LPQA R + P L Q + L +++SL VG D ++ + + G++ E ++ Sbjct: 138 QTMRLIILPQAFRKMTPLLLQQSIILFQDTSLVYTVGLVDFLNSARSNGDIIGRSHEFLI 197 Query: 369 IWMFIYLSLSIMIALFMNRLNAKI 392 +Y +S + + RL +I Sbjct: 198 FAGVVYFLISFSASWLVKRLQKRI 221 >gi|113971389|ref|YP_735182.1| polar amino acid ABC transporter inner membrane subunit [Shewanella sp. MR-4] gi|117919333|ref|YP_868525.1| polar amino acid ABC transporter inner membrane subunit [Shewanella sp. ANA-3] gi|113886073|gb|ABI40125.1| polar amino acid ABC transporter, inner membrane subunit [Shewanella sp. MR-4] gi|117611665|gb|ABK47119.1| polar amino acid ABC transporter, inner membrane subunit [Shewanella sp. ANA-3] Length = 226 Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 43/123 (34%), Positives = 77/123 (62%), Gaps = 4/123 (3%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IA + A+I+EI+R+G+ AV +GQ EAA +LGL+ +L++LPQA+++I+P L ++ Sbjct: 101 IAFGLNSGAYISEIIRAGIQAVDKGQTEAARSLGLSQAMTMKLIILPQAIKNILPALGNE 160 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA----IEIILIWMFIYLSLSIMIALFMN 386 ++ LLK +++ +G DL+ G I ++T + LI++F+ S + M++ F Sbjct: 161 FIVLLKETAVIGFIGGVDLMRAGEIIRSRTFEDSIPLFTCALIYLFLTYSFTFMLSKFEK 220 Query: 387 RLN 389 RL Sbjct: 221 RLK 223 >gi|315222036|ref|ZP_07863947.1| ABC transporter, permease protein [Streptococcus anginosus F0211] gi|315189002|gb|EFU22706.1| ABC transporter, permease protein [Streptococcus anginosus F0211] Length = 521 Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 41/109 (37%), Positives = 66/109 (60%) Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 +S T A+++EIVR G+ AV +GQ EAA ALG+TH + R V+LPQ +R+I+P ++++ Sbjct: 383 VSINTGAYMSEIVRGGIFAVDKGQFEAATALGMTHNQTMRKVVLPQVVRNILPATGNEFV 442 Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 +K++S+ + +L G TI QT Q + I IY L+ + Sbjct: 443 INIKDTSVLNVISVVELYFSGNTIATQTYQYFQTFTIIAVIYFVLTFTV 491 >gi|258545566|ref|ZP_05705800.1| general amino acid ABC superfamily ATP binding cassette transporter, permease protein [Cardiobacterium hominis ATCC 15826] gi|258519266|gb|EEV88125.1| general amino acid ABC superfamily ATP binding cassette transporter, permease protein [Cardiobacterium hominis ATCC 15826] Length = 339 Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 37/96 (38%), Positives = 63/96 (65%), Gaps = 4/96 (4%) Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326 M I ++ + +A++AE+VR GL A+PRGQ EAA +LGL + RL++LPQA+ ++IP Sbjct: 206 MRALIGVALFASAYMAEVVRGGLQAIPRGQFEAADSLGLGYWAKMRLIILPQALTTVIPG 265 Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362 +T+ ++ L K+++L +G D + I++ GQ Sbjct: 266 ITNTFVGLFKDTTLVSIIGLYDFLG----IVHSAGQ 297 >gi|110801621|ref|YP_699371.1| glutamine-binding periplasmic protein of glutamine ABC transporter [Clostridium perfringens SM101] gi|110682122|gb|ABG85492.1| amino acid ABC transporter, amino acid-binding protein/permease protein, His/Glu/Gln/Arg/opine family [Clostridium perfringens SM101] Length = 502 Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 57/161 (35%), Positives = 90/161 (55%), Gaps = 11/161 (6%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 VF +LG+++ + A + R + K + +YIS F G P LV + L L+F P Sbjct: 309 VFGVILGLIVGI-ALAMIRVYKIPVLKQIAEVYISFFR--GTPLLVQLFL---LYFGVP- 361 Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 I F + I L +A+IAEI+RS + A+ +GQMEA ++LG+T +A Sbjct: 362 ----QVIPSLQNMNAFTAALIGLGLNASAYIAEILRSSIDAIDKGQMEACLSLGMTRAQA 417 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 + V+LPQA R IPPL + +++ +K SSLA +G +L++ Sbjct: 418 LKRVVLPQAFRIAIPPLGNIFVDTVKGSSLAFTLGVVELLA 458 >gi|167035336|ref|YP_001670567.1| polar amino acid ABC transporter inner membrane subunit [Pseudomonas putida GB-1] gi|166861824|gb|ABZ00232.1| polar amino acid ABC transporter, inner membrane subunit [Pseudomonas putida GB-1] Length = 223 Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 50/176 (28%), Positives = 89/176 (50%), Gaps = 17/176 (9%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 +++PLL + T+ +P L++ D PV F S +A + Sbjct: 63 RSIPLLLVITWFYLAVP----FVLRWITGEDTPV-------------GAFTSCVVAFMMF 105 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 AA+ EIVR+G+ ++ +GQM AA ALG+ + + RL++LPQA R + P L Q + L + Sbjct: 106 EAAYFCEIVRAGVQSISKGQMGAAQALGMNYAQTMRLIILPQAFRKMTPLLLQQSIILFQ 165 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 ++SL VG D ++ + + G++ E ++ +Y +S + + RL +I Sbjct: 166 DTSLVYTVGLVDFLNSARSNGDIIGRSHEFLIFAGVVYFIISFSASWLVKRLQKRI 221 >gi|325685987|gb|EGD28048.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus delbrueckii subsp. lactis DSM 20072] Length = 500 Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 42/131 (32%), Positives = 76/131 (58%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P + IA+ + A++AE +RSG+ +V +GQ EAA +LGL+ K R V+ PQA+++I Sbjct: 365 PALAAGIIAIGLNSGAYVAEDIRSGINSVAKGQTEAARSLGLSQAKTYRYVVFPQALKNI 424 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 P L ++++ L K+SSL +G +L+ G + T + + + I M IY ++ ++ Sbjct: 425 WPALGNEFITLTKDSSLVSVIGVGELMYETGLVQTATYRGVMPLFITMCIYFVVTFILTR 484 Query: 384 FMNRLNAKIAL 394 +N ++ L Sbjct: 485 LLNYFERRMNL 495 Score = 36.6 bits (83), Expect = 6.5, Method: Compositional matrix adjust. Identities = 28/106 (26%), Positives = 42/106 (39%), Gaps = 1/106 (0%) Query: 44 CVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSG 103 +N NN +K +L ++ A S S YA G T + Sbjct: 250 AINKTINNCQKQDL-FNKKYIPAAAKAMKQASSKTNNSMSKYAGYFATGLGYTMIITICS 308 Query: 104 MIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 + ++G + RLS NKL+ I Y+E R P +V I F+Y Sbjct: 309 ITIGLVLGVIFALMRLSKNKLLHAIAVCYIEFLRGTPQMVQIMFVY 354 >gi|296333449|ref|ZP_06875902.1| High affinity arginine ABC transporter (permease) [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305675045|ref|YP_003866717.1| high affinity arginine ABC transporter permease [Bacillus subtilis subsp. spizizenii str. W23] gi|296149647|gb|EFG90543.1| High affinity arginine ABC transporter (permease) [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305413289|gb|ADM38408.1| High affinity arginine ABC transporter (permease) [Bacillus subtilis subsp. spizizenii str. W23] Length = 219 Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 50/166 (30%), Positives = 86/166 (51%), Gaps = 29/166 (17%) Query: 191 VFSFVLGIVLSLFATRLSR------HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244 + +LGIVLSL R F+ + PL+ + FGLP L L +Q+ Sbjct: 31 IIGLILGIVLSLCKISTFRPLIWIADFYTSVFRGTPLVLQLMIVYFGLPQL----LGFQI 86 Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304 +F + +ALS +AA+++EI+R+G+ A+ +GQ EAA+ALG Sbjct: 87 D-------------------QFWAAVVALSLNSAAYVSEIIRAGINAIDKGQKEAAVALG 127 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 + + K + +LLPQA ++I P + ++ + L K S++ +G D++ Sbjct: 128 VPYGKMMKDLLLPQAFKNISPAIVNELITLTKESAIVTVIGLGDVM 173 >gi|295103474|emb|CBL01018.1| amino acid ABC transporter membrane protein, PAAT family (TC 3.A.1.3.-) [Faecalibacterium prausnitzii SL3/3] Length = 254 Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 40/127 (31%), Positives = 79/127 (62%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + L + A+++EI+R GL+AV GQMEA +LGL + ++++PQA+R+++P L ++ Sbjct: 128 LTLGINSGAYVSEIIRGGLMAVDPGQMEAGRSLGLNYMTTMVVIIIPQAIRAVLPALGNE 187 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++ LLK++SL +G +L+ I+N+T A+ +L IYL L ++ +++ Sbjct: 188 FIILLKDTSLITTIGGKELLYAAQGIMNRTYDAMFPLLGVALIYLILVMLFTWLLSKFER 247 Query: 391 KIALKEK 397 ++A ++ Sbjct: 248 RLAQSDR 254 >gi|152982686|ref|YP_001351971.1| ABC-type glutamate/aspartate transport system permease protein [Janthinobacterium sp. Marseille] gi|151282763|gb|ABR91173.1| ABC-type glutamate/aspartate transport system permease protein [Janthinobacterium sp. Marseille] Length = 228 Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 40/127 (31%), Positives = 74/127 (58%) Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327 S YI + AA+ EI+R+G+ ++ +GQ+ A ALGLT+R++ +LV+LPQA R+++P L Sbjct: 100 SAYITFIMFEAAYFCEIMRAGIQSISKGQVNAGYALGLTYRQSMQLVVLPQAFRNMLPIL 159 Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387 +Q + L ++ SL + D V + + + +E+ L +Y LS ++ + + Sbjct: 160 LTQTIVLFQDVSLVSLLNVTDFVGAAVKVAQRDSRVVEMYLFVAIVYFVLSFALSTLVKQ 219 Query: 388 LNAKIAL 394 L + A+ Sbjct: 220 LQKRFAI 226 Score = 43.5 bits (101), Expect = 0.055, Method: Compositional matrix adjust. Identities = 29/80 (36%), Positives = 38/80 (47%), Gaps = 9/80 (11%) Query: 70 FEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWIC 129 FEI PY +L G T L I GTL+ RLS+NK ++ I Sbjct: 6 FEIITRTWPY---------LLAGLQYTLQLTVVAAFGGVIFGTLLAMARLSSNKTLSLIA 56 Query: 130 RVYVEVFRNIPPLVVIFFLY 149 YV + R+IP L+VIF+ Y Sbjct: 57 AAYVNLMRSIPLLLVIFWFY 76 >gi|295395634|ref|ZP_06805826.1| His/Glu/Gln/Arg/opine family amino acid ABC superfamily ATP binding cassette transporter, permease protein [Brevibacterium mcbrellneri ATCC 49030] gi|294971450|gb|EFG47333.1| His/Glu/Gln/Arg/opine family amino acid ABC superfamily ATP binding cassette transporter, permease protein [Brevibacterium mcbrellneri ATCC 49030] Length = 264 Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 66/217 (30%), Positives = 111/217 (51%), Gaps = 30/217 (13%) Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI---FGLPTL-VLIALKYQLH 245 FVF+ +LG +L+L K P +I+T I G+P L V IA Sbjct: 69 FVFAMLLGNILALM----------KISSVAPYRWIATAYIEFFRGVPALLVFIAF----G 114 Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305 F P N ++++ +AL +A+IAE +R+GL AVP+GQ EAA +LG+ Sbjct: 115 FGIPAAFSINL-------NTYVTVMLALGIVESAYIAETLRAGLQAVPKGQYEAARSLGM 167 Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA----DLVSVGGTIINQTG 361 +H +A +++PQAMR I+PPLT++ + + K+SSL +G + +L G I Sbjct: 168 SHSRAMFTIVVPQAMRIILPPLTNEIIIMTKDSSLIYLLGLSAVQFELALFGKNAIAAPS 227 Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 + +++ YL +++ + + ++ A KE+K Sbjct: 228 AGLTPLVVAGACYLVITLPLGWLARKFESRQA-KERK 263 >gi|62179394|ref|YP_215811.1| glutamine ABC transporter permease protein [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|62127027|gb|AAX64730.1| ABC superfamily (membrane), glutamine high-affinity transporter [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|322713865|gb|EFZ05436.1| glutamine ABC transporter permease protein [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] Length = 219 Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 61/212 (28%), Positives = 114/212 (53%), Gaps = 14/212 (6%) Query: 186 NAKIFVFSFVLGIVLSL---FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY 242 AK+ ++ VLG+ L A +R F + L++I +I G P +V + Y Sbjct: 18 GAKMTLWISVLGLAGGLVIGLAAGFARTFGGWFANHIALVFIE--IIRGTPIVVQVMFIY 75 Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302 F P+ FN + + P F + + + + A+IAEI R ++++ +G EA +A Sbjct: 76 ---FALPM--AFNDL---RIDP-FSAAVVTIMINSGAYIAEITRGAVLSIHKGFREAGLA 126 Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362 LGL+ R+ R V+LP A+R ++PPL +Q++ +K++SL + +G A+L G II + Sbjct: 127 LGLSRRETIRHVILPLALRRMLPPLGNQWIISIKDTSLFIVIGVAELTRQGQEIIAGNFR 186 Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394 ++EI YL ++++++ + RL ++ + Sbjct: 187 SLEIWSAVAVFYLIITLVLSFILRRLERRMKI 218 >gi|158423550|ref|YP_001524842.1| glutamate/aspartate transport system permease protein 2 [Azorhizobium caulinodans ORS 571] gi|158330439|dbj|BAF87924.1| glutamate/aspartate transport system permease protein 2 [Azorhizobium caulinodans ORS 571] Length = 255 Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 47/129 (36%), Positives = 77/129 (59%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+ + L+ Y +A I E +RSG+ ++PRGQ++AA+ALGLT A R V+LP+A R +IP Sbjct: 110 FVPALLCLTFYGSARIGEQMRSGIQSLPRGQLQAALALGLTPVMAYRHVVLPEAFRLMIP 169 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PLTS+++ ++K SS+A+ +G +L + + E YL ++ I L M Sbjct: 170 PLTSEFMAIVKYSSVAMTIGLLELTGQARAMQEASFHIFEAFSAATVGYLVINGCIVLAM 229 Query: 386 NRLNAKIAL 394 L ++A+ Sbjct: 230 RWLERRLAV 238 Score = 36.2 bits (82), Expect = 9.7, Method: Compositional matrix adjust. Identities = 27/80 (33%), Positives = 42/80 (52%), Gaps = 2/80 (2%) Query: 80 TSDS--SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137 +SD SY + +G + T L + A + G+++G R + ++ I YVE+FR Sbjct: 14 SSDGVHSYLYNLGLGVLWTLGLTGATAAGALVFGSILGVFRTTRAPVLNAIGATYVEIFR 73 Query: 138 NIPPLVVIFFLYKSVLSVLP 157 NIP LV +F Y + VLP Sbjct: 74 NIPLLVQMFLWYFVLPEVLP 93 >gi|51596054|ref|YP_070245.1| amino-acid ABC transporter (permease) [Yersinia pseudotuberculosis IP 32953] gi|153950219|ref|YP_001401242.1| amino acid ABC transporter permease [Yersinia pseudotuberculosis IP 31758] gi|186895160|ref|YP_001872272.1| polar amino acid ABC transporter inner membrane subunit [Yersinia pseudotuberculosis PB1/+] gi|51589336|emb|CAH20958.1| putative amino-acid ABC transporter (permease) [Yersinia pseudotuberculosis IP 32953] gi|152961714|gb|ABS49175.1| amino acid ABC transporter, permease protein [Yersinia pseudotuberculosis IP 31758] gi|186698186|gb|ACC88815.1| polar amino acid ABC transporter, inner membrane subunit [Yersinia pseudotuberculosis PB1/+] Length = 220 Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 40/128 (31%), Positives = 77/128 (60%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I LS TAA+ +E +R+ + ++ +GQ EAA ++G+T +A V+LPQA R+ +PPL + Sbjct: 93 IGLSLNTAAYTSETLRAAISSIEKGQWEAAASIGMTRWQALYRVILPQAGRTALPPLGNS 152 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++ L+K++SLA + +L I ++T + + L IY ++ +++ NRL A Sbjct: 153 FIGLVKDTSLAATIQVPELFRQAQLITSRTMEVFTMYLAASLIYWIMATLLSALQNRLEA 212 Query: 391 KIALKEKK 398 + ++++ Sbjct: 213 HVNRQDQE 220 >gi|189023947|ref|YP_001934715.1| Tetracycline resistance protein [Brucella abortus S19] gi|189019519|gb|ACD72241.1| Tetracycline resistance protein [Brucella abortus S19] Length = 289 Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 35/82 (42%), Positives = 59/82 (71%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I ++ + +A++AE+VR GL A+PRGQ E A ALGL++ + T LV+LPQA++ +IP + + Sbjct: 157 IGVALFASAYMAEVVRGGLQAIPRGQYEGADALGLSYWQKTGLVVLPQALKLVIPGIVNT 216 Query: 331 YLNLLKNSSLAVAVGFADLVSV 352 ++ L K++SL +G DL+ + Sbjct: 217 FIGLFKDTSLVYIIGMFDLLGI 238 >gi|82699627|ref|YP_414201.1| binding-protein dependent transport system inner membrane protein [Brucella melitensis biovar Abortus 2308] gi|254689009|ref|ZP_05152263.1| binding-protein dependent transport system inner membrane protein [Brucella abortus bv. 6 str. 870] gi|254697144|ref|ZP_05158972.1| binding-protein dependent transport system inner membrane protein [Brucella abortus bv. 2 str. 86/8/59] gi|254707028|ref|ZP_05168856.1| binding-protein dependent transport system inner membrane protein [Brucella pinnipedialis M163/99/10] gi|254730040|ref|ZP_05188618.1| binding-protein dependent transport system inner membrane protein [Brucella abortus bv. 4 str. 292] gi|256113278|ref|ZP_05454146.1| binding-protein dependent transport system inner membrane protein [Brucella melitensis bv. 3 str. Ether] gi|256257259|ref|ZP_05462795.1| binding-protein dependent transport system inner membrane protein [Brucella abortus bv. 9 str. C68] gi|256264231|ref|ZP_05466763.1| amino acid ABC transporter permease [Brucella melitensis bv. 2 str. 63/9] gi|260545547|ref|ZP_05821288.1| polar amino acid ABC transporter [Brucella abortus NCTC 8038] gi|260754502|ref|ZP_05866850.1| ABC-type arginine transport system, permease component [Brucella abortus bv. 6 str. 870] gi|260757723|ref|ZP_05870071.1| ABC transporter permease [Brucella abortus bv. 4 str. 292] gi|260761548|ref|ZP_05873891.1| ABC transporter permease [Brucella abortus bv. 2 str. 86/8/59] gi|260883531|ref|ZP_05895145.1| polar amino acid ABC transporter [Brucella abortus bv. 9 str. C68] gi|265994690|ref|ZP_06107247.1| polar amino acid ABC transporter [Brucella melitensis bv. 3 str. Ether] gi|82615728|emb|CAJ10724.1| Binding-protein-dependent transport systems inner membrane component:Tetracycline resistance protein [Brucella melitensis biovar Abortus 2308] gi|260096954|gb|EEW80829.1| polar amino acid ABC transporter [Brucella abortus NCTC 8038] gi|260668041|gb|EEX54981.1| ABC transporter permease [Brucella abortus bv. 4 str. 292] gi|260671980|gb|EEX58801.1| ABC transporter permease [Brucella abortus bv. 2 str. 86/8/59] gi|260674610|gb|EEX61431.1| ABC-type arginine transport system, permease component [Brucella abortus bv. 6 str. 870] gi|260873059|gb|EEX80128.1| polar amino acid ABC transporter [Brucella abortus bv. 9 str. C68] gi|262765803|gb|EEZ11592.1| polar amino acid ABC transporter [Brucella melitensis bv. 3 str. Ether] gi|263094477|gb|EEZ18299.1| amino acid ABC transporter permease [Brucella melitensis bv. 2 str. 63/9] gi|326408767|gb|ADZ65832.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Brucella melitensis M28] gi|326538485|gb|ADZ86700.1| binding-protein-dependent transport systems inner membrane component:Tetracycline resistance protein [Brucella melitensis M5-90] Length = 343 Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 35/82 (42%), Positives = 59/82 (71%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I ++ + +A++AE+VR GL A+PRGQ E A ALGL++ + T LV+LPQA++ +IP + + Sbjct: 211 IGVALFASAYMAEVVRGGLQAIPRGQYEGADALGLSYWQKTGLVVLPQALKLVIPGIVNT 270 Query: 331 YLNLLKNSSLAVAVGFADLVSV 352 ++ L K++SL +G DL+ + Sbjct: 271 FIGLFKDTSLVYIIGMFDLLGI 292 >gi|54307243|ref|YP_128263.1| amino acid ABC transporter permease [Photobacterium profundum SS9] gi|46911663|emb|CAG18461.1| Putative amino acid ABC transporter, permease protein [Photobacterium profundum SS9] Length = 241 Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 65/202 (32%), Positives = 106/202 (52%), Gaps = 17/202 (8%) Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV-LIALKYQLHFDKPV 250 F+ ++ I L+L R + L LYIS F G P LV L L Y L P+ Sbjct: 50 FALIIAITLALV-----RVYKLPVLNQLSQLYISFFR--GTPLLVQLFLLYYGLPQVFPI 102 Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 FIG F + I LS + AA++AE +R+ +I V R Q EA++A+G+T +A Sbjct: 103 -----FIGLDA----FSAAVIGLSLHFAAYMAESIRAAIIGVDRCQREASLAIGMTEMQA 153 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370 R ++LPQA R +P L + +++++K++SLA +G A++++ + + + E L Sbjct: 154 MRRIILPQATRIALPSLMNYFIDMIKSTSLAFTLGVAEIMAKAQMEASSSFKFFEAFLAV 213 Query: 371 MFIYLSLSIMIALFMNRLNAKI 392 FIY L +++ N AK+ Sbjct: 214 AFIYWGLVLVLTQVQNWAEAKL 235 >gi|197286729|ref|YP_002152601.1| amino acid ABC transporter permease [Proteus mirabilis HI4320] gi|194684216|emb|CAR45715.1| putative amino acid ABC transporter, permease protein [Proteus mirabilis HI4320] Length = 249 Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 41/136 (30%), Positives = 80/136 (58%), Gaps = 1/136 (0%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 PE ++ AL+ T+++IA V++G++A+ +GQ +A ++LG + ++LPQA+R + Sbjct: 94 PEITTVICALALITSSYIAHGVKAGILAIGKGQWQAGLSLGFNRWQTLWYIVLPQALRMM 153 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG-QAIEIILIWMFIYLSLSIMIA 382 +P +Q++ L+K++SLA VG +L + + N++ +E+ L FIY L + Sbjct: 154 VPSFINQWIALIKDTSLAYVVGVGELSFLATQVNNRSMVYPMEVFLFVAFIYFVLCFSLE 213 Query: 383 LFMNRLNAKIALKEKK 398 L NR+ +++K Sbjct: 214 LIANRVGKLFTTQKEK 229 >gi|153809859|ref|ZP_01962527.1| hypothetical protein RUMOBE_00240 [Ruminococcus obeum ATCC 29174] gi|149834037|gb|EDM89117.1| hypothetical protein RUMOBE_00240 [Ruminococcus obeum ATCC 29174] Length = 272 Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 65/223 (29%), Positives = 113/223 (50%), Gaps = 30/223 (13%) Query: 193 SFVLGIVLSLF---------ATRLSRHFHEKTGKAL-------PLLYISTF---LIFGLP 233 FVL ++L+L A + R+ H + G L PL +I+T ++ P Sbjct: 49 GFVLALILALMRMSNIRPFRALAVDRNGHLREGGPLVWLSKFNPLSFIATAYVEILRSTP 108 Query: 234 TLVLIALKYQLHF---DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290 LV I + Y F D P F FI + P +AL + A++ EI+R+G+ Sbjct: 109 VLVQIFIIYYGVFGMIDLPSFQLFGFIKFNRFFPGV----VALGMNSGAYLCEIMRAGIQ 164 Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 ++ +GQ EAA +LGL+ R ++LPQA+++I+P + ++++ ++K S++ +G D++ Sbjct: 165 SIDQGQTEAARSLGLSQTMNLRYIILPQALKNILPAIANEFVVIIKESAITYTIGVQDIM 224 Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSL----SIMIALFMNRLN 389 S + T IE +L+ IY L S +IA F R++ Sbjct: 225 SAVNAVKGATFIIIEPLLVATAIYFCLCFPTSKLIAYFERRMS 267 >gi|16079988|ref|NP_390814.1| sulfur-containing amino acid ABC transporter permease [Bacillus subtilis subsp. subtilis str. 168] gi|221310880|ref|ZP_03592727.1| hypothetical protein Bsubs1_16026 [Bacillus subtilis subsp. subtilis str. 168] gi|221315205|ref|ZP_03597010.1| hypothetical protein BsubsN3_15922 [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221320123|ref|ZP_03601417.1| hypothetical protein BsubsJ_15838 [Bacillus subtilis subsp. subtilis str. JH642] gi|221324405|ref|ZP_03605699.1| hypothetical protein BsubsS_15997 [Bacillus subtilis subsp. subtilis str. SMY] gi|7674447|sp|O34315|TCYL_BACSU RecName: Full=L-cystine transport system permease protein tcyL gi|2293249|gb|AAC00327.1| amino acid transporter [Bacillus subtilis] gi|2635401|emb|CAB14896.1| sulfur-containing amino acid ABC transporter (permease) [Bacillus subtilis subsp. subtilis str. 168] Length = 239 Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 65/233 (27%), Positives = 116/233 (49%), Gaps = 15/233 (6%) Query: 171 LNNRGLSFPTLT--MDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL 228 +N G PTLT + I S + G VL LF L R ++ L +YIS F Sbjct: 7 MNMIGDFVPTLTAYLPVTLYILTLSLLFGFVLGLFLA-LPRIYNIPIVNQLAKVYISFFR 65 Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA---FIAEIV 285 G P +V + + + + P L I S + P Y A++ Y + AEI+ Sbjct: 66 --GTPIMVQL---FIVFYGIPALTGLIGIDTSKMDP----FYAAVATYALSNAAAAAEII 116 Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345 R+G+ +V +GQ EAA ++GL+ +A R ++LPQA+ P + + ++ LK++SLA ++G Sbjct: 117 RAGVGSVDKGQTEAAYSIGLSGSQAFRRIVLPQALVQAFPNMGNMVISSLKDTSLAFSIG 176 Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 D+ G T+I + ++E+ + +Y +++++ F +I + + Sbjct: 177 VMDMSGRGQTLITSSNHSLEVYIALSIVYYAVAVLFEWFFRVAEKRIKKNQTR 229 >gi|134290995|ref|YP_001114764.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia vietnamiensis G4] gi|134134184|gb|ABO58509.1| amino acid ABC transporter membrane protein 2, PAAT family [Burkholderia vietnamiensis G4] Length = 248 Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 51/147 (34%), Positives = 82/147 (55%), Gaps = 4/147 (2%) Query: 251 LGQFNFIGGSTVSPEFMSLY----IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306 LGQF I S V P Y ++L+ TA + AEIVR GL+AVP GQ+EA ++GL+ Sbjct: 78 LGQFGVIRESFVWPLLRDPYACAVLSLALCTAGYTAEIVRGGLMAVPVGQIEAGYSIGLS 137 Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 R V+ P A+R +P +++ + L+K+++LA V ++ V II QT + E+ Sbjct: 138 GFALLRRVIGPIALRQCLPAYSTEAVLLVKSTALASLVTVWEVTGVAQQIIQQTYRTTEV 197 Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIA 393 + IYL L+ +I + L +++ Sbjct: 198 FVCAALIYLGLNFIIVRVLGALEWRLS 224 >gi|313895906|ref|ZP_07829460.1| ABC transporter, permease protein [Selenomonas sp. oral taxon 137 str. F0430] gi|312975331|gb|EFR40792.1| ABC transporter, permease protein [Selenomonas sp. oral taxon 137 str. F0430] Length = 227 Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 42/128 (32%), Positives = 76/128 (59%), Gaps = 1/128 (0%) Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329 ++A AA+ AEI R+G+ AVPRGQ EAA LG+++ A R ++LPQ +R +PP+++ Sbjct: 101 FLAFVLNYAAYFAEIFRAGIQAVPRGQYEAARVLGMSYPLALRRIILPQVLRITLPPVSN 160 Query: 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 + +NL+K++SL + DL+ V TI+ + +++ F YL+++ + +L Sbjct: 161 ETINLVKDTSLVYILAMNDLLRVARTIVQREFDMTPLVIAGAF-YLAMTAALTWGFKKLE 219 Query: 390 AKIALKEK 397 A ++ Sbjct: 220 AHYGRYDR 227 >gi|302337319|ref|YP_003802525.1| polar amino acid ABC transporter inner membrane protein [Spirochaeta smaragdinae DSM 11293] gi|301634504|gb|ADK79931.1| polar amino acid ABC transporter, inner membrane subunit [Spirochaeta smaragdinae DSM 11293] Length = 219 Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 59/203 (29%), Positives = 107/203 (52%), Gaps = 22/203 (10%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 +F+ ++G+V+ + R+ H+ + +Y+S I P LV + Y + F P Sbjct: 32 LFALIIGLVVGII-----RYSHKGILGTIAKIYVSA--IRNTPLLVQL---YFVFFGLPR 81 Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 LG V F + I LS + A+IAE+V++G A+PRGQ+EAA ++GL+ + Sbjct: 82 LG--------IVLSAFQTGVIGLSFNSGAYIAEMVKAGFQAIPRGQIEAAESIGLSVHQR 133 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL-- 368 RL+L+PQA I+P + Q + L+K++ L + ++ + N+T ++ L Sbjct: 134 FRLILIPQAALQIVPAVGGQMVQLIKDTCLLSLLAITEITKAATEVGNKTYMFLQAFLFA 193 Query: 369 --IWMFIYLSLSIMIALFMNRLN 389 I++ + + L+I I LF ++N Sbjct: 194 GIIYLIVNMLLNIAIDLFERKIN 216 >gi|295398548|ref|ZP_06808581.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Aerococcus viridans ATCC 11563] gi|294973212|gb|EFG49006.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Aerococcus viridans ATCC 11563] Length = 230 Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 44/121 (36%), Positives = 73/121 (60%), Gaps = 1/121 (0%) Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 AL+ + +A I+EI+R GL A+P+GQ EA ++ GLT + +LLPQA+RS+ P + SQ Sbjct: 94 ALTIFESAMISEIIRGGLNAIPKGQAEAGLSTGLTRVQTLIYILLPQAVRSMAPSIVSQL 153 Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQ-TGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 + L+K++SLA + +L I NQ T I + +I F+Y + +++ F L+ Sbjct: 154 IALIKDTSLATIISLPELTHNAKIIYNQNTAYVIPMFVIMTFLYWLVCYILSKFSKYLSN 213 Query: 391 K 391 + Sbjct: 214 R 214 >gi|294631809|ref|ZP_06710369.1| glutamate permease [Streptomyces sp. e14] gi|292835142|gb|EFF93491.1| glutamate permease [Streptomyces sp. e14] Length = 221 Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 55/146 (37%), Positives = 86/146 (58%), Gaps = 5/146 (3%) Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 LG NF T++ F L L YT+AF+ E +RSG+ VP GQ EAA ALGL+ + Sbjct: 81 LGSQNF---DTINFRFAVL--GLIAYTSAFVCEAIRSGINTVPVGQAEAARALGLSFTQV 135 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370 LV+LPQA RS++ PLT+ + L KN+++A A+G A+ + T+I Q + I ++ Sbjct: 136 LTLVVLPQAFRSVVGPLTNVLIALTKNTTVAAAIGVAEAAFLMKTMIENEAQLLAISAVF 195 Query: 371 MFIYLSLSIMIALFMNRLNAKIALKE 396 F ++ L++ L + + K+A+K Sbjct: 196 AFGFVCLTLPTGLILGWVGKKVAVKR 221 >gi|242239815|ref|YP_002987996.1| glutamine ABC transporter permease [Dickeya dadantii Ech703] gi|242131872|gb|ACS86174.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya dadantii Ech703] Length = 219 Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 40/118 (33%), Positives = 74/118 (62%) Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 + A+IAEI R ++++ +G EA +ALGL+HR R V+ P A+R ++PPL +Q++ +K Sbjct: 101 SGAYIAEITRGAVMSIHKGFTEAGLALGLSHRATLRHVITPLALRRMLPPLGNQWIISIK 160 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394 ++SL + +G ++L II +A+EI+ IYL +++++ + M L K+ + Sbjct: 161 DTSLCIVIGVSELTRQAQEIIAGNFRALEILTATAIIYLVITLILTIGMRWLERKLKI 218 >gi|291612200|ref|YP_003541013.1| putative amino acid ABC transporter permease [Bacillus anthracis str. 'Ames Ancestor'] gi|224552833|gb|ACN55047.1| putative amino acid ABC transporter, permease protein [Bacillus anthracis str. 'Ames Ancestor'] Length = 269 Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 74/223 (33%), Positives = 116/223 (52%), Gaps = 19/223 (8%) Query: 177 SFPTLTMDT--NAKIFVFSFVLGIVLSL-FATRLSRHFHEKTGKALPLLYISTFLIFGLP 233 ++PTL T ++ + S VLG ++ L FA R + K ++ +YI+ +I G P Sbjct: 47 TYPTLLKATIVTLQLTLTSLVLGSLIGLLFA--FFRISNNKVLNSIAHVYIA--IIRGTP 102 Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293 +V IA+ Y F +P F + IAL+ + A+I EI R + +V Sbjct: 103 LIVQIAILY-----------FGITSVVVFTP-FWAGAIALAIHNGAYITEIFRGSIQSVD 150 Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353 RGQMEAA +LG+ + A R ++LPQA R +PPL +Q++ LK+SSL VG A+L G Sbjct: 151 RGQMEAARSLGMPYPLAMRRIVLPQAFRQSLPPLGNQFIIGLKDSSLVAYVGMAELWGSG 210 Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 +I Q ++ +I YL L ++ +N L ++ KE Sbjct: 211 LSIAAGNFQQLDTYIIVGLYYLVLVLLFTYLVNLLEKRLQRKE 253 Score = 36.6 bits (83), Expect = 7.6, Method: Compositional matrix adjust. Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 1/74 (1%) Query: 83 SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142 S+Y T +L + T L + ++ ++IG L R+S NK++ I VY+ + R P + Sbjct: 46 STYPT-LLKATIVTLQLTLTSLVLGSLIGLLFAFFRISNNKVLNSIAHVYIAIIRGTPLI 104 Query: 143 VVIFFLYKSVLSVL 156 V I LY + SV+ Sbjct: 105 VQIAILYFGITSVV 118 >gi|167461574|ref|ZP_02326663.1| Glutamine transport system permease protein glnP [Paenibacillus larvae subsp. larvae BRL-230010] Length = 217 Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 54/160 (33%), Positives = 93/160 (58%), Gaps = 20/160 (12%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 V SF++G +L + R+ L LL++ +I LP L++I + + F P Sbjct: 31 VLSFIIGSILGIL-----RYTRIPVVSQLVLLWVE--MIRNLPLLLII---FFVRFALPE 80 Query: 251 LG-QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309 +G +F+ I S IAL+ + +A I+EI+R GL ++ +GQ+EAA + GLT+ + Sbjct: 81 VGIKFDVI---------TSAIIALTVFESAMISEIIRGGLNSIEKGQIEAARSSGLTYIQ 131 Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349 ++ PQA++ ++PP SQ+++LLK++SLAV + DL Sbjct: 132 TLWHIIFPQAVKRMVPPTVSQFISLLKDTSLAVIISAPDL 171 Score = 39.7 bits (91), Expect = 0.93, Method: Compositional matrix adjust. Identities = 20/57 (35%), Positives = 38/57 (66%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 GF T W+A ++ + IIG+++G R + +V+ + ++VE+ RN+P L++IFF+ Sbjct: 18 GFGITLWMAAVSIVLSFIIGSILGILRYTRIPVVSQLVLLWVEMIRNLPLLLIIFFV 74 >gi|27379091|ref|NP_770620.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] gi|27352241|dbj|BAC49245.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] Length = 219 Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 43/116 (37%), Positives = 72/116 (62%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P F + +ALS Y A+ EI+R+GL +VP+ Q+EA LGL+ + R +LLP A+R+ Sbjct: 84 PAFEAAAVALSLYFGAYSVEIIRAGLDSVPKNQIEAGQCLGLSGWQVFRHILLPPALRNA 143 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379 P +TSQ++ LL +SLA V +L V G I ++T ++ E+ + +Y ++++ Sbjct: 144 YPAVTSQFVLLLLGTSLASQVAADELFHVAGFIESRTYRSFEVYAVICAVYFAMAM 199 >gi|18311075|ref|NP_563009.1| amino acid ABC transporter [Clostridium perfringens str. 13] gi|18145757|dbj|BAB81799.1| probable amino acid ABC transporter [Clostridium perfringens str. 13] Length = 502 Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 57/161 (35%), Positives = 90/161 (55%), Gaps = 11/161 (6%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 VF +LG+++ + A + R + K + +YIS F G P LV + L L+F P Sbjct: 309 VFGMILGLIVGI-ALAMIRVYKIPVLKQIAEVYISFFR--GTPLLVQLFL---LYFGVP- 361 Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 I F + I L +A+IAEI+RS + A+ +GQMEA ++LG+T +A Sbjct: 362 ----QVIPSLQNMSAFTAALIGLGLNASAYIAEILRSSIDAIDKGQMEACLSLGMTMAQA 417 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 + V+LPQA R IPPL + +++ +K SSLA +G +L++ Sbjct: 418 LKRVVLPQAFRIAIPPLGNIFVDTVKGSSLAFTLGVVELLA 458 >gi|116490803|ref|YP_810347.1| ABC-type amino acid transport system, permease and periplasmic component [Oenococcus oeni PSU-1] gi|116091528|gb|ABJ56682.1| amino acid ABC transporter membrane protein, PAAT family / amino acid ABC transporter substrate-binding protein, PAAT family [Oenococcus oeni PSU-1] Length = 545 Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 43/114 (37%), Positives = 70/114 (61%) Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327 S I +S T A++AEI+R G+I++ +GQ EAA ALG+TH + ++LPQA+R+ IP + Sbjct: 395 SALIIVSINTGAYLAEIIRGGIISIDQGQFEAASALGMTHFQQMEKIVLPQAVRNSIPAV 454 Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 T++++ +K++S+ + ++L G TI Q Q L IYL L+ I Sbjct: 455 TNEFIVNIKDTSVLSIISVSELFFTGSTIAGQNFQFFHTYLTISLIYLVLTFTI 508 >gi|313123999|ref|YP_004034258.1| ABC amino acid transporter permease/periplasmic component [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|312280562|gb|ADQ61281.1| ABC-type amino acid transport system, permease and periplasmic component [Lactobacillus delbrueckii subsp. bulgaricus ND02] Length = 500 Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 42/131 (32%), Positives = 76/131 (58%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P + IA+ + A++AE +RSG+ +V +GQ EAA +LGL+ K R V+ PQA+++I Sbjct: 365 PALAAGIIAIGLNSGAYVAEDIRSGINSVAKGQTEAARSLGLSQAKTYRYVVFPQALKNI 424 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 P L ++++ L K+SSL +G +L+ G + T + + + I M IY ++ ++ Sbjct: 425 WPALGNEFITLTKDSSLVSVIGVGELMYETGLVQTATYRGVMPLFITMCIYFVVTFILTR 484 Query: 384 FMNRLNAKIAL 394 +N ++ L Sbjct: 485 LLNYFERRMNL 495 Score = 37.4 bits (85), Expect = 4.5, Method: Compositional matrix adjust. Identities = 28/106 (26%), Positives = 43/106 (40%), Gaps = 1/106 (0%) Query: 44 CVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSG 103 +N NN +K +L ++ A S S YA+ G T + Sbjct: 250 AINKTINNCQKQDL-FNKKYIPAAAKAMKQATSKTNNSMSKYASYFATGLGYTMIITICS 308 Query: 104 MIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 + ++G + RLS NKL+ I Y+E R P +V I F+Y Sbjct: 309 ITIGLVLGVIFALMRLSKNKLLHAIAVCYIEFLRGTPQMVQIMFVY 354 >gi|257487793|ref|ZP_05641834.1| amino acid ABC transporter permease [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 174 Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 44/129 (34%), Positives = 74/129 (57%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + I L+ + + ++EIVR L A+PRGQ+EA A+GL ++ R VLLPQAMR I+P Sbjct: 45 FQAGAIGLTLFCGSHVSEIVRGALQAIPRGQLEAGKAIGLRFGQSLRYVLLPQAMRQILP 104 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 + ++K S+L +G A+L+ +I +T +E L F++ ++ I L Sbjct: 105 TWVNSSTEIVKASTLLSVIGVAELLLSTQQVIARTFMTLEFYLFAGFLFFLINYAIELLG 164 Query: 386 NRLNAKIAL 394 ++ ++AL Sbjct: 165 RQIEKRVAL 173 >gi|172056714|ref|YP_001813174.1| polar amino acid ABC transporter, inner membrane subunit [Exiguobacterium sibiricum 255-15] gi|171989235|gb|ACB60157.1| polar amino acid ABC transporter, inner membrane subunit [Exiguobacterium sibiricum 255-15] Length = 215 Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 45/131 (34%), Positives = 76/131 (58%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F +L LS + +A+I+E R+ + +V RGQ EAA +LG+ RK + V+LPQA+ IP Sbjct: 85 FQALAFGLSLHFSAYISESFRAAISSVDRGQWEAADSLGIPRRKTFKDVILPQALSRAIP 144 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PL++ ++++K++SL V +L V I T + ++L IY +S +I Sbjct: 145 PLSNSVIDIIKSTSLGTIVAVEELTYVSDQISATTYLVMPLLLFSAAIYWIMSTLIQGVQ 204 Query: 386 NRLNAKIALKE 396 +RL A+ ++ E Sbjct: 205 HRLEARFSIPE 215 >gi|330901738|gb|EGH33157.1| amino acid ABC transporter permease [Pseudomonas syringae pv. japonica str. M301072PT] gi|330981317|gb|EGH79420.1| amino acid ABC transporter permease [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 220 Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 44/129 (34%), Positives = 74/129 (57%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + I L+ + + ++EIVR L A+PRGQ+EA A+GL ++ R VLLPQAMR I+P Sbjct: 91 FQAGAIGLTLFCGSHVSEIVRGALQAIPRGQLEAGKAIGLRFNQSLRYVLLPQAMRQILP 150 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 + ++K S+L +G A+L+ +I +T +E L F++ ++ I L Sbjct: 151 TWVNSSTEIVKASTLLSVIGVAELLLSTQQVIARTFMTLEFYLFAGFLFFLINYAIELLG 210 Query: 386 NRLNAKIAL 394 ++ ++AL Sbjct: 211 RQIEKRVAL 219 >gi|270260985|ref|ZP_06189258.1| transporter [Serratia odorifera 4Rx13] gi|270044469|gb|EFA17560.1| transporter [Serratia odorifera 4Rx13] Length = 219 Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 41/129 (31%), Positives = 79/129 (61%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + + + + A+IAEI R ++++ G EA +ALGL+ R+ R V++P A+R ++P Sbjct: 90 FSAAVVTIMINSGAYIAEITRGAVLSIHNGFREAGLALGLSRRETIRYVIMPLALRRMLP 149 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PL +Q++ +K++SL + +G A+L G II +A+EI IYL ++++++ + Sbjct: 150 PLGNQWIISIKDTSLFIVIGVAELTRQGQEIIAGNFRALEIWSAVAVIYLIITLVLSFVL 209 Query: 386 NRLNAKIAL 394 RL ++ + Sbjct: 210 RRLERRMKI 218 >gi|260854102|ref|YP_003227993.1| glutamine high-affinity transport system, membrane component [Escherichia coli O26:H11 str. 11368] gi|260866977|ref|YP_003233379.1| glutamine high-affinity transport system, membrane component [Escherichia coli O111:H- str. 11128] gi|257752751|dbj|BAI24253.1| glutamine high-affinity transport system, membrane component [Escherichia coli O26:H11 str. 11368] gi|257763333|dbj|BAI34828.1| glutamine high-affinity transport system, membrane component [Escherichia coli O111:H- str. 11128] gi|323175570|gb|EFZ61165.1| glutamine transport system permease protein glnP [Escherichia coli 1180] Length = 219 Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 60/206 (29%), Positives = 111/206 (53%), Gaps = 12/206 (5%) Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248 I V G+V+ L A +R F + L++I +I G P +V + Y F Sbjct: 25 ISVLGLAGGLVIGLLAG-FARTFGGWIANHVALVFIE--VIRGTPIVVQVMFIY---FAL 78 Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308 P+ FN + + P F + + + + A+IAEI R ++++ +G EA +ALGL+ Sbjct: 79 PM--AFNDL---RIDP-FTAAVVTIMINSGAYIAEITRGAVLSIHKGFREAGLALGLSRW 132 Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368 + R V+LP A+R ++PPL +Q++ +K++SL + +G A+L G II +A+EI Sbjct: 133 ETIRYVILPLALRRMLPPLGNQWIISIKDTSLFIVIGVAELTRQGQEIIAGNFRALEIWS 192 Query: 369 IWMFIYLSLSIMIALFMNRLNAKIAL 394 +YL ++++++ + RL ++ + Sbjct: 193 AVAVLYLIITLVLSFILRRLERRMKI 218 >gi|104784170|ref|YP_610668.1| amino acid ABC transporter permease [Pseudomonas entomophila L48] gi|95113157|emb|CAK17885.1| putative amino acid ABC transporter, permease protein [Pseudomonas entomophila L48] Length = 219 Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 39/103 (37%), Positives = 63/103 (61%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P F + L + A+ + E+VR L ++PRGQ EA +++GL + VLLPQA++ + Sbjct: 88 PSFWCAVLVLGLWGASEVGEVVRGALQSLPRGQREAGLSIGLGGWQLYGYVLLPQALKRM 147 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 PP + Y ++K SSLAV +G D++ VG II +T +++ I Sbjct: 148 TPPTINIYTRIIKTSSLAVLIGVVDVIKVGQQIIERTYESVLI 190 >gi|330969355|gb|EGH69421.1| amino acid ABC transporter permease [Pseudomonas syringae pv. aceris str. M302273PT] Length = 283 Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 46/119 (38%), Positives = 74/119 (62%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IALS A+++EI R+G+I V GQ EAA+AL L + V LPQAMR+IIPP T+Q Sbjct: 154 IALSLNYGAYLSEIFRAGIIGVSVGQREAALALALRPTQIFWRVTLPQAMRTIIPPTTNQ 213 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 ++++LK+SSL +G +++ + + + + IE++ +Y +SI + L +RL Sbjct: 214 FISMLKDSSLISVMGVWEVMFLAQSYGRSSYRYIEMLTTAAVLYWIMSIGLELLQSRLE 272 >gi|260430204|ref|ZP_05784178.1| ABC transporter permease protein [Citreicella sp. SE45] gi|260418676|gb|EEX11932.1| ABC transporter permease protein [Citreicella sp. SE45] Length = 221 Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 40/127 (31%), Positives = 72/127 (56%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 +++ +ALS + AF AE+ R G++++ RGQ E ALG+TH R V++PQA+ ++P Sbjct: 91 YVAAVLALSTQSGAFYAEVFRGGIVSIERGQWEGGRALGMTHSALMRRVIVPQAIARMVP 150 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 P + LLK ++LA + +ADL+ + +T + +E+ +YL L + + F Sbjct: 151 PFIERSFELLKTTALASTLAYADLLYQAMMVNAETFRPLEVYTTIALMYLVLLVTASQFA 210 Query: 386 NRLNAKI 392 A++ Sbjct: 211 RLAEARL 217 >gi|254505865|ref|ZP_05118010.1| amino acid ABC transporter, permease protein [Vibrio parahaemolyticus 16] gi|219551088|gb|EED28068.1| amino acid ABC transporter, permease protein [Vibrio parahaemolyticus 16] Length = 264 Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 62/179 (34%), Positives = 93/179 (51%), Gaps = 15/179 (8%) Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247 KI + S + +V+ L T L + + G+AL YI LI P LV I L Y + Sbjct: 68 KISLISLLFTLVIGL-TTALLKLSNSVVGRALATGYIE--LIRNTPLLVQIYLLYFVF-- 122 Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307 PV+G F + +ALS + A+ AEI R GL ++ +GQ EAA +LGL Sbjct: 123 GPVIGL----------DRFATAVLALSLFQGAYTAEIFRGGLNSISKGQFEAAKSLGLNP 172 Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 V+LPQ ++ +PPLT++ ++L+KNSS+ + DL + G I+ +T EI Sbjct: 173 FYTYYDVILPQLLQRTLPPLTNEVVSLVKNSSIVSVMAIFDLTTEGRNIVAETAMPFEI 231 >gi|119025489|ref|YP_909334.1| permease protein of ABC transporter system [Bifidobacterium adolescentis ATCC 15703] gi|154486921|ref|ZP_02028328.1| hypothetical protein BIFADO_00754 [Bifidobacterium adolescentis L2-32] gi|118765073|dbj|BAF39252.1| permease protein of ABC transporter system [Bifidobacterium adolescentis ATCC 15703] gi|154084784|gb|EDN83829.1| hypothetical protein BIFADO_00754 [Bifidobacterium adolescentis L2-32] Length = 327 Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 49/138 (35%), Positives = 80/138 (57%), Gaps = 1/138 (0%) Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312 +F I +V F + ++ L+ AA++AEIVR+GL AV GQ EAA ALG+ R Sbjct: 144 EFWSIDSQSVITAFNAAWLGLALNEAAYLAEIVRAGLEAVDPGQTEAAKALGMKRTLIMR 203 Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA-DLVSVGGTIINQTGQAIEIILIWM 371 ++LPQAMR IIPP ++++ +LK +SL AV F +L I + + I ++++ Sbjct: 204 RIVLPQAMRIIIPPTGNEFIGMLKTTSLVNAVPFTLELQFATTAIATRLYKPIPLLIVAC 263 Query: 372 FIYLSLSIMIALFMNRLN 389 YL ++ ++ + +RL Sbjct: 264 IWYLVITSILMVIQSRLE 281 >gi|229822721|ref|ZP_04448791.1| hypothetical protein GCWU000282_00009 [Catonella morbi ATCC 51271] gi|229787534|gb|EEP23648.1| hypothetical protein GCWU000282_00009 [Catonella morbi ATCC 51271] Length = 229 Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 53/179 (29%), Positives = 97/179 (54%), Gaps = 13/179 (7%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 +A+ + YIS F G+P LV + + +++ P++G V F + + LS Sbjct: 63 RAIAIAYISFFR--GVPLLVTL---FFIYYGLPLMG--------IVMSAFTAAILGLSIT 109 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 +A+ AEI+R+G+ V +GQ EAA A+GL++R++ R V++PQA R IPPL++ L+L+K Sbjct: 110 ASAYTAEIIRAGIEGVEKGQWEAAFAVGLSYRQSLRYVVIPQATRLAIPPLSNVMLDLVK 169 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395 +SS+A + ++ + + + ++ IY + +L +L + AL Sbjct: 170 SSSIAAIISVPEIFQKAKVVGASEHDFMTMYILVAVIYWLICTAYSLLQAKLERRFALD 228 >gi|196045258|ref|ZP_03112490.1| glutamine ABC transporter, permease/substrate-binding protein [Bacillus cereus 03BB108] gi|196023842|gb|EDX62517.1| glutamine ABC transporter, permease/substrate-binding protein [Bacillus cereus 03BB108] Length = 230 Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 49/126 (38%), Positives = 74/126 (58%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IAL+ + A+I EI R + +V RGQMEAA +LG+ + A R ++LPQA R IPPL +Q Sbjct: 89 IALAIHNGAYITEIFRGSIQSVDRGQMEAARSLGMPYSLAMRRIVLPQAFRQSIPPLGNQ 148 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++ LK+SSL VG ++L G +I Q ++ +I YL L ++ +N L Sbjct: 149 FIIGLKDSSLVAYVGLSELWGSGLSIAAGNFQQLDTYIIVGLYYLVLVLLFTYLVNLLEK 208 Query: 391 KIALKE 396 ++ KE Sbjct: 209 RLQRKE 214 >gi|157363726|ref|YP_001470493.1| polar amino acid ABC transporter, inner membrane subunit [Thermotoga lettingae TMO] gi|157314330|gb|ABV33429.1| polar amino acid ABC transporter, inner membrane subunit [Thermotoga lettingae TMO] Length = 223 Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 55/202 (27%), Positives = 112/202 (55%), Gaps = 18/202 (8%) Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252 F++GI+L + R + K + + +I LI G P LV + + L++ PV G Sbjct: 32 GFIMGIILCV-----GRIYGRKIIRFICAGFIE--LIRGTPMLVQL---FILYYGLPVYG 81 Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312 ++P M+ I ++A+ AE +R + ++ GQM AA+++G+T +A R Sbjct: 82 -------IRLTP-LMAALIGFCINSSAYQAEYIRGAIQSIGSGQMVAALSIGMTKWQAVR 133 Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372 L++LPQA+R +IP T++++ LLK +S+A +G ++++ I ++ + ++ L+ F Sbjct: 134 LIILPQALRRVIPAWTNEFIYLLKYTSMAYIIGAPEMMAQAKFIASRNFEFFKVYLLTAF 193 Query: 373 IYLSLSIMIALFMNRLNAKIAL 394 IY++L + + ++L ++ + Sbjct: 194 IYIALVWLATVLFSKLEKRLQI 215 Score = 40.4 bits (93), Expect = 0.48, Method: Compositional matrix adjust. Identities = 20/61 (32%), Positives = 34/61 (55%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G V T ++ I I+G ++ GR+ K++ +IC ++E+ R P LV +F L Sbjct: 14 LLNGLVTTLYMTLFAAITGFIMGIILCVGRIYGRKIIRFICAGFIELIRGTPMLVQLFIL 73 Query: 149 Y 149 Y Sbjct: 74 Y 74 >gi|148559315|ref|YP_001258725.1| amino acid ABC transporter permease [Brucella ovis ATCC 25840] gi|148370572|gb|ABQ60551.1| amino acid ABC transporter, permease protein [Brucella ovis ATCC 25840] Length = 385 Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 35/82 (42%), Positives = 59/82 (71%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I ++ + +A++AE+VR GL A+PRGQ E A ALGL++ + T LV+LPQA++ +IP + + Sbjct: 253 IGVALFASAYMAEVVRGGLQAIPRGQYEGADALGLSYWQKTSLVVLPQALKLVIPGIVNT 312 Query: 331 YLNLLKNSSLAVAVGFADLVSV 352 ++ L K++SL +G DL+ + Sbjct: 313 FIGLFKDTSLVYIIGMFDLLGI 334 >gi|27379090|ref|NP_770619.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] gi|27352240|dbj|BAC49244.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] Length = 216 Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 52/156 (33%), Positives = 82/156 (52%), Gaps = 7/156 (4%) Query: 237 LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296 LI L + +F PV F+G P +++ +A + YTAAF+ EI R GL AV + Q Sbjct: 64 LIGLLFFFYFGMPV-----FLGIQV--PALVAVTVAYTLYTAAFLGEIWRGGLEAVKQAQ 116 Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356 EA LGL+ + R ++ PQA+R +PP + L+K +SLA +GF +L G + Sbjct: 117 WEAGACLGLSAWQQFRHIIAPQALRLSLPPTVGFLVQLIKGTSLASILGFVELARAGQVV 176 Query: 357 INQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 T Q + + IY +L + + L+ L A++ Sbjct: 177 SAATFQPLLTYALVAAIYFALCLPLTLWSRSLEARL 212 >gi|16079453|ref|NP_390277.1| High affinity arginine ABC transporter permease [Bacillus subtilis subsp. subtilis str. 168] gi|221310317|ref|ZP_03592164.1| hypothetical protein Bsubs1_13151 [Bacillus subtilis subsp. subtilis str. 168] gi|221314641|ref|ZP_03596446.1| hypothetical protein BsubsN3_13072 [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221319564|ref|ZP_03600858.1| hypothetical protein BsubsJ_12993 [Bacillus subtilis subsp. subtilis str. JH642] gi|221323840|ref|ZP_03605134.1| hypothetical protein BsubsS_13122 [Bacillus subtilis subsp. subtilis str. SMY] gi|321311878|ref|YP_004204165.1| High affinity arginine ABC transporter permease [Bacillus subtilis BSn5] gi|1731063|sp|P54536|ARTQ_BACSU RecName: Full=Arginine transport system permease protein ArtQ gi|1303950|dbj|BAA12605.1| YqiY [Bacillus subtilis] gi|2634831|emb|CAB14328.1| High affinity arginine ABC transporter (permease) [Bacillus subtilis subsp. subtilis str. 168] gi|291484835|dbj|BAI85910.1| hypothetical protein BSNT_03567 [Bacillus subtilis subsp. natto BEST195] gi|320018152|gb|ADV93138.1| High affinity arginine ABC transporter (permease) [Bacillus subtilis BSn5] Length = 219 Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 50/166 (30%), Positives = 86/166 (51%), Gaps = 29/166 (17%) Query: 191 VFSFVLGIVLSLFATRLSR------HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244 + +LGIVLSL R F+ + PL+ + FGLP L L +Q+ Sbjct: 31 IIGLILGIVLSLCKISTFRPFIWIADFYTSVFRGTPLVLQLMIVYFGLPQL----LGFQI 86 Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304 +F + +ALS +AA+++EI+R+G+ A+ +GQ EAA+ALG Sbjct: 87 D-------------------QFWAAVVALSLNSAAYVSEIIRAGINAIDKGQKEAAVALG 127 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 + + K + +LLPQA ++I P + ++ + L K S++ +G D++ Sbjct: 128 VPYGKMMKDLLLPQAFKNISPAIVNELITLTKESAIVTVIGLGDVM 173 >gi|254854300|ref|ZP_05243648.1| amino acid ABC transporter [Listeria monocytogenes FSL R2-503] gi|258607692|gb|EEW20300.1| amino acid ABC transporter [Listeria monocytogenes FSL R2-503] Length = 238 Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 66/211 (31%), Positives = 108/211 (51%), Gaps = 24/211 (11%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 +F F+LG++LSL R + L +YIS F G P +V + + + + P Sbjct: 33 IFGFILGVLLSL-----PRIYKIPVLDQLARVYISFFR--GTPIMVQL---FIVFYGIPA 82 Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCY---TAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307 L I S + P LY A++ Y +AA IAE++R+G+ +V GQ EAA ++GL+ Sbjct: 83 LSSIVGIDLSQMDP----LYAAIATYALSSAATIAEVIRAGVNSVDAGQAEAAYSIGLSS 138 Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367 + ++LPQA+ +P + + LK++SLA ++G D+ G T+I + A+E Sbjct: 139 HQTFLRIILPQALYQALPNFGNLVIGYLKDTSLAFSIGVMDMSGRGQTLITLSNHALE-- 196 Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 +Y+SLSI+ L L EK+ Sbjct: 197 -----VYISLSIIYYLTAVLLEYSFKWIEKR 222 >gi|229543204|ref|ZP_04432264.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus coagulans 36D1] gi|229327624|gb|EEN93299.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus coagulans 36D1] Length = 230 Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 38/127 (29%), Positives = 79/127 (62%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 F + I S A+ +EI+R+ ++++P+GQ EAA ++G+ + +A R ++LPQA+R + Sbjct: 97 SFPAAIIGFSLNVGAYASEIIRAAILSIPKGQWEAAYSIGMNYSQALRRIVLPQAVRVSV 156 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 PPL++ +++L+K++SLA + ADL I + T Q + + + F+Y + +++++ Sbjct: 157 PPLSNTFISLVKDTSLASLILVADLFRKAQEIASTTYQFMLLYVEAAFLYWVICLILSII 216 Query: 385 MNRLNAK 391 +L + Sbjct: 217 QQKLEGR 223 >gi|90419463|ref|ZP_01227373.1| putative ABC transporter permease protein [Aurantimonas manganoxydans SI85-9A1] gi|90336400|gb|EAS50141.1| putative ABC transporter permease protein [Aurantimonas manganoxydans SI85-9A1] Length = 224 Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 39/86 (45%), Positives = 60/86 (69%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F S AL+ ++A+ AEI R+G+ A+PRGQ EAA ++GL+ R V+LPQA+R +IP Sbjct: 93 FASATTALTMISSAYTAEIYRAGIEAIPRGQFEAAQSIGLSQWFLMRDVVLPQAIRIVIP 152 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVS 351 PLT+ +N++K+++LA V DL+ Sbjct: 153 PLTNNSINVMKDTALASVVALPDLLK 178 >gi|326202620|ref|ZP_08192488.1| LOW QUALITY PROTEIN: polar amino acid ABC transporter, inner membrane subunit [Clostridium papyrosolvens DSM 2782] gi|325987204|gb|EGD48032.1| LOW QUALITY PROTEIN: polar amino acid ABC transporter, inner membrane subunit [Clostridium papyrosolvens DSM 2782] Length = 221 Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 53/149 (35%), Positives = 87/149 (58%), Gaps = 9/149 (6%) Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248 I + + +LG+++ L + H K KA+ YI I G P LV I L + L Sbjct: 23 IAILTVILGVIIGT-VIALMKISHNKVLKAVASSYIE--FIRGTPLLVQITLFFYL---- 75 Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308 L +F+ G F+ IA+S + A++AEI+R+G+ AV +GQMEAA ++G TH Sbjct: 76 ISLPEFHIFGLEL--ERFIPGVIAMSVNSGAYVAEIIRAGIQAVDKGQMEAARSIGFTHG 133 Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 +A R ++LPQA+R+I+P L ++++ ++K Sbjct: 134 QAMRYIVLPQALRNILPALGNEFVVVIKE 162 >gi|320177859|gb|EFW52845.1| Glutamate transport membrane-spanning protein [Shigella boydii ATCC 9905] Length = 219 Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 58/198 (29%), Positives = 108/198 (54%), Gaps = 12/198 (6%) Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256 G+V+ L A +R F + L++I +I G P +V + Y F P+ FN Sbjct: 33 GLVIGLLAG-FARTFGGWIANHVALVFIE--MIRGTPIVVQVMFIY---FALPM--AFND 84 Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316 + + P F + + + + A+IAEI R ++++ +G EA +ALGL+ + R V+L Sbjct: 85 L---RIDP-FTAAVVTIMINSGAYIAEITRGAVLSIHKGFREAGLALGLSRWETIRYVIL 140 Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376 P A+R ++PPL +Q++ +K++SL + +G A+L G II +A+EI YL Sbjct: 141 PLALRRMLPPLGNQWIISIKDTSLFIVIGVAELTRQGQEIIAGNFRALEIWSAVAVFYLI 200 Query: 377 LSIMIALFMNRLNAKIAL 394 ++++++ + RL ++ + Sbjct: 201 ITLVLSFILRRLERRMKI 218 >gi|311070992|ref|YP_003975915.1| putative ABC transporter permease [Bacillus atrophaeus 1942] gi|310871509|gb|ADP34984.1| putative ABC transporter (permease) [Bacillus atrophaeus 1942] Length = 225 Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 60/172 (34%), Positives = 94/172 (54%), Gaps = 13/172 (7%) Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281 LYIS + G+P LV++ + L+F P +G I S V+ + S +AA+I Sbjct: 64 LYIS--FMRGVPILVIL---FILYFGFPYIG----IEFSAVTAALL----GFSLNSAAYI 110 Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341 AEI RS + +V +GQ EAA +LGL++ K R V+LPQ++R +PPL + L+L+K SSLA Sbjct: 111 AEINRSAISSVDKGQWEAAASLGLSYWKTMRGVILPQSVRVALPPLANVLLDLIKASSLA 170 Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393 + +L+ I + + + ++ IY ++ A F N L K A Sbjct: 171 AMITVPELLQHAKIIGGREFDYMTMYILTALIYWAICSFAAAFQNILEKKYA 222 Score = 41.2 bits (95), Expect = 0.29, Method: Compositional matrix adjust. Identities = 19/61 (31%), Positives = 33/61 (54%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 ++ G T ++F M T++G + R+S L+ W R+Y+ R +P LV++F L Sbjct: 22 VIKGIWYTLLISFVSMFAGTMLGLFISLARMSKFALLRWPARLYISFMRGVPILVILFIL 81 Query: 149 Y 149 Y Sbjct: 82 Y 82 >gi|300309410|ref|YP_003773502.1| glutamine ABC transporter permease [Herbaspirillum seropedicae SmR1] gi|300072195|gb|ADJ61594.1| ABC-type glutamine transport system, permease component protein [Herbaspirillum seropedicae SmR1] Length = 250 Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 41/133 (30%), Positives = 78/133 (58%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F S +A++ + A+++EI R+G+ ++ RGQ EA+ +LG+++ R V+LPQA R ++P Sbjct: 118 FASAVLAITLNSGAYVSEIFRAGIQSIDRGQSEASRSLGMSYLATLRRVVLPQAFRRMLP 177 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PL + + ++K+SSLA A+G A+L T+ + E L IY +++ ++ + Sbjct: 178 PLGNNAIAIVKDSSLASAIGLAELAYAARTVSGAYARYWEPYLTISVIYWLITLALSALV 237 Query: 386 NRLNAKIALKEKK 398 L A+ + + Sbjct: 238 RHLEARYGKGDAR 250 >gi|241765005|ref|ZP_04763001.1| polar amino acid ABC transporter, inner membrane subunit [Acidovorax delafieldii 2AN] gi|241365402|gb|EER60195.1| polar amino acid ABC transporter, inner membrane subunit [Acidovorax delafieldii 2AN] Length = 221 Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 45/136 (33%), Positives = 80/136 (58%), Gaps = 1/136 (0%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G + E +S + + AA+ +EI+R+G+ +VPRGQ+ A ALG+T+ + +LV+LPQ Sbjct: 85 GRPIGAE-VSAVVTFVAFEAAYFSEIMRAGIQSVPRGQVFAGQALGMTYGQNMKLVVLPQ 143 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378 A R+++P L +Q + L +++SL A+G D++ G+ IE L +Y + Sbjct: 144 AFRNMLPVLLTQTIILFQDTSLVYAIGAYDMLKGFEVAGKNFGRPIEAYLAAAVLYFVMC 203 Query: 379 IMIALFMNRLNAKIAL 394 ++ + RL+ KIA+ Sbjct: 204 YALSWMVKRLHQKIAI 219 >gi|171057832|ref|YP_001790181.1| polar amino acid ABC transporter inner membrane subunit [Leptothrix cholodnii SP-6] gi|170775277|gb|ACB33416.1| polar amino acid ABC transporter, inner membrane subunit [Leptothrix cholodnii SP-6] Length = 250 Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 39/91 (42%), Positives = 61/91 (67%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F S +ALS A+I+EI R+G+ ++ RGQ +AA +LG TH ++ R V+LPQA R ++P Sbjct: 119 FFSGCLALSLNAGAYISEIFRAGIQSIHRGQTQAAYSLGFTHAQSMRFVVLPQAFRRMVP 178 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356 L ++ + L+K+SSL A+G A+L T+ Sbjct: 179 ALVNEGVTLIKDSSLVSAIGLAELALAARTV 209 >gi|324328060|gb|ADY23320.1| amino acid ABC transporter permease [Bacillus thuringiensis serovar finitimus YBT-020] Length = 219 Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 40/129 (31%), Positives = 78/129 (60%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P F++ +A S + A+++E++R+G+ AV +GQ EAA+ALG+ + K R ++ PQA+++I Sbjct: 87 PAFVAAVLAFSLNSGAYMSEVIRAGIQAVDKGQTEAAMALGIPYGKMMRNIIFPQALKNI 146 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 +P L +++ L K S++ +G DL+ + +T + +E +L IY L I++ L Sbjct: 147 LPALVNEFATLTKESAVVTVIGATDLMRRAYIVGGETFKYLEPLLFVGLIYYMLVIILTL 206 Query: 384 FMNRLNAKI 392 + ++ Sbjct: 207 VGKAIEGRM 215 >gi|304413343|ref|ZP_07394816.1| permease component of ABC-type amino acid transport system [Candidatus Regiella insecticola LSR1] gi|304284186|gb|EFL92579.1| permease component of ABC-type amino acid transport system [Candidatus Regiella insecticola LSR1] Length = 218 Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 53/187 (28%), Positives = 100/187 (53%), Gaps = 12/187 (6%) Query: 208 SRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFM 267 +R + K + L++I LI G P +V + Y F P++ + P F Sbjct: 43 ARAYGGKISSNIALVFIE--LIRGTPIIVQVMFIY---FAMPIMMPIR------IDP-FT 90 Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327 + + + + A+IAEI R ++++ +G EA +ALGL+ R R V+ P A+R ++PPL Sbjct: 91 AAVVTIMINSGAYIAEITRGAVLSIHKGFREAGLALGLSKRDTLRYVIAPLALRRMLPPL 150 Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387 +Q++ +K++SL + +G A+L G II +A+EI IYL +++ ++ + + Sbjct: 151 GNQWIVSIKDTSLFMVIGVAELTRQGQEIIAGNFRAMEIWSAVAVIYLVITLALSFVLRK 210 Query: 388 LNAKIAL 394 + K+ + Sbjct: 211 VEKKLKI 217 >gi|326790343|ref|YP_004308164.1| polar amino acid ABC transporter inner membrane protein [Clostridium lentocellum DSM 5427] gi|326541107|gb|ADZ82966.1| polar amino acid ABC transporter, inner membrane subunit [Clostridium lentocellum DSM 5427] Length = 240 Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 39/105 (37%), Positives = 68/105 (64%), Gaps = 2/105 (1%) Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316 IGG +F+ + + Y A++AE++R+G+ AVP+GQ+EAA + G ++ +A R ++L Sbjct: 87 IGGRV--DKFLLGVMGVGIYHGAYVAEVIRTGIEAVPKGQLEAANSQGFSYIQAMRYIIL 144 Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361 PQ ++ I+PPL +Q LNL+KN+S+ V DL+ + + +G Sbjct: 145 PQTIKIIMPPLANQALNLVKNTSVLAMVAGLDLMYFADSWASSSG 189 Score = 41.6 bits (96), Expect = 0.24, Method: Compositional matrix adjust. Identities = 25/68 (36%), Positives = 38/68 (55%), Gaps = 4/68 (5%) Query: 90 LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 L GF T ++ G++ A ++G L G + K + I RVY+E+F+N P ++ IFF Y Sbjct: 21 LQGFSMTLRVSIVGLLVAIMLGVLFGVLYSTKRKPLKLIARVYIEIFQNTPLVIQIFFYY 80 Query: 150 KSVLSVLP 157 S LP Sbjct: 81 ----SCLP 84 >gi|317047473|ref|YP_004115121.1| polar amino acid ABC transporter inner membrane subunit [Pantoea sp. At-9b] gi|316949090|gb|ADU68565.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea sp. At-9b] Length = 242 Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 57/156 (36%), Positives = 86/156 (55%), Gaps = 9/156 (5%) Query: 251 LGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306 LGQF I S V P F+ +ALS TAA+ AEI+R L+AVP GQ+EA +A G++ Sbjct: 77 LGQFGVIRHSFVWPFLREPFICAVLALSLCTAAYTAEILRGALLAVPPGQVEAGLACGMS 136 Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 R ++ P +R +P +++ + L+K+++LA V D+ V II +T + +E+ Sbjct: 137 RGLLLRRIIAPIMLRYALPAYSTEAILLVKSTALASLVTVWDVTGVAQQIIQRTYRTMEV 196 Query: 367 ILIWMFIYLSLSIMI----ALFMNRLNAKIALKEKK 398 L IYL L+ +I AL RL + EKK Sbjct: 197 FLCAAAIYLILNFIIVQLYALLERRLT-PVHRVEKK 231 >gi|254693492|ref|ZP_05155320.1| binding-protein dependent transport system inner membrane protein [Brucella abortus bv. 3 str. Tulya] gi|261213750|ref|ZP_05928031.1| ABC-type amino acid transporter permease [Brucella abortus bv. 3 str. Tulya] gi|260915357|gb|EEX82218.1| ABC-type amino acid transporter permease [Brucella abortus bv. 3 str. Tulya] Length = 343 Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 35/82 (42%), Positives = 59/82 (71%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I ++ + +A++AE+VR GL A+PRGQ E A ALGL++ + T LV+LPQA++ +IP + + Sbjct: 211 IGVALFASAYMAEVVRGGLQAIPRGQYEGADALGLSYWQKTGLVVLPQALKLVIPGIVNT 270 Query: 331 YLNLLKNSSLAVAVGFADLVSV 352 ++ L K++SL +G DL+ + Sbjct: 271 FIGLFKDTSLVYIIGMFDLLGI 292 >gi|238897603|ref|YP_002923282.1| high-affinity glutamine transport protein (ABC superfamily, membrane) [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] gi|229465360|gb|ACQ67134.1| high-affinity glutamine transport protein (ABC superfamily, membrane) [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] Length = 218 Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 54/187 (28%), Positives = 99/187 (52%), Gaps = 12/187 (6%) Query: 208 SRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFM 267 +R + K + L++I LI G P +V + Y F P++ + P F Sbjct: 43 TRAYGGKISSNVALIFIE--LIRGTPIVVQVMFIY---FALPMMVPIR------IDP-FT 90 Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327 + + + + A+IAEI R ++++ +G EA +ALGL+ R R V+ P A+R ++PPL Sbjct: 91 AAVVTIMINSGAYIAEITRGAVLSIHKGFREAGLALGLSRRDTLRYVVAPLALRRMLPPL 150 Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387 +Q++ +K++SL + +G A+L G II +A+EI +YL +++ + + R Sbjct: 151 GNQWIVSIKDTSLFIVIGVAELTRQGQEIIAGNFRAMEIWSAVAVMYLIITLTLGFVLRR 210 Query: 388 LNAKIAL 394 L K+ + Sbjct: 211 LERKLKI 217 >gi|221197499|ref|ZP_03570546.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia multivorans CGD2M] gi|221204172|ref|ZP_03577190.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia multivorans CGD2] gi|221176338|gb|EEE08767.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia multivorans CGD2] gi|221184053|gb|EEE16453.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia multivorans CGD2M] Length = 221 Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 69/238 (28%), Positives = 115/238 (48%), Gaps = 25/238 (10%) Query: 160 DHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKAL 219 D S+V P+ F+ +GL+ LT+ A + +LG VLSL SR Sbjct: 4 DFSVVWPY-WFVLVKGLA---LTLAYTATCAIVGSLLGFVLSLLRMSPSRWLRGPVAA-- 57 Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279 Y+ F G P L+ + + + F PV+ + P ++S+ I+L+ Y AA Sbjct: 58 ---YVEFFR--GTPLLIQL---FWVFFCFPVVLRLPI-------PPYLSVLISLTLYMAA 102 Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339 +E R L ++ Q +A IAL L+ V+ PQA+ IPPL S ++L K S+ Sbjct: 103 ITSETFRGSLKSIAGEQHDACIALSLSPHVKIVYVIFPQALLRAIPPLLSNVVSLFKESA 162 Query: 340 LAVAVGFADLVSVGGTIINQTGQAIE----IILIWMFIYLSLSIMIALFMNRLNAKIA 393 L +VG ADL+ VG + N T + +E + +I+ + L+ ++ + +R+ + A Sbjct: 163 LISSVGIADLMFVGQNVSNSTARPVEFLTTVAVIYFLVAFPLTRLVGVVESRMLRRYA 220 >gi|28868348|ref|NP_790967.1| amino acid ABC transporter permease [Pseudomonas syringae pv. tomato str. DC3000] gi|28851585|gb|AAO54662.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tomato str. DC3000] Length = 243 Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 46/119 (38%), Positives = 74/119 (62%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IALS A+++EI R+G+I V GQ EAA+AL L + V LPQAMR+IIPP T+Q Sbjct: 114 IALSLNYGAYLSEIFRAGIIGVAAGQREAALALALRPTQIFWRVTLPQAMRTIIPPTTNQ 173 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 ++++LK+SSL +G +++ + + + + IE++ +Y +SI + L +RL Sbjct: 174 FISMLKDSSLISVMGVWEVMFLAQSYGRSSYRYIEMLTTAAVLYWIMSIGLELLQSRLE 232 >gi|83595861|gb|ABC25223.1| general amino acid ABC transporter, permease protein [uncultured marine bacterium Ant4D3] Length = 369 Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 55/175 (31%), Positives = 94/175 (53%), Gaps = 19/175 (10%) Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP--TLVLI 238 LT+ VFS LGI+L+L R + K + +I I G+P TL+ + Sbjct: 164 LTLTIGVTGIVFSLPLGILLAL-----GRQSNLPIIKYFCIGFIE--FIRGVPLITLLFV 216 Query: 239 ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQME 298 A +F P T M + I ++ + +A++AE++R GL A+P+GQ+E Sbjct: 217 ASTMLSYFLPP----------GTTFDLLMRVLIMVTLFASAYMAEVIRGGLQALPKGQLE 266 Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353 AA +LGL + +A R ++LPQA++ IP + + ++ L K+S+L + +G D + +G Sbjct: 267 AAESLGLNYGQAMRFIILPQALKISIPGIVNTFIGLYKDSTLVIVIGLLDPLGIG 321 >gi|24372629|ref|NP_716671.1| amino acid ABC transporter, permease protein [Shewanella oneidensis MR-1] gi|24346665|gb|AAN54116.1|AE015549_2 amino acid ABC transporter, permease protein [Shewanella oneidensis MR-1] Length = 226 Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 43/123 (34%), Positives = 77/123 (62%), Gaps = 4/123 (3%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IA + A+I+EI+R+G+ AV +GQ EAA +LGL+ +L++LPQA+++I+P L ++ Sbjct: 101 IAFGLNSGAYISEIIRAGIQAVDKGQTEAARSLGLSQAMTMKLIILPQAIKNILPALGNE 160 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA----IEIILIWMFIYLSLSIMIALFMN 386 ++ LLK +++ +G DL+ G I ++T + LI++F+ S + M++ F Sbjct: 161 FIVLLKETAVIGFIGGVDLMRAGEIIRSRTFEDSVPLFTCALIYLFLTYSFTFMLSKFEK 220 Query: 387 RLN 389 RL Sbjct: 221 RLK 223 >gi|225862405|ref|YP_002747783.1| glutamine ABC transporter, permease/substrate-binding protein [Bacillus cereus 03BB102] gi|225786434|gb|ACO26651.1| glutamine ABC transporter, permease/substrate-binding protein [Bacillus cereus 03BB102] Length = 230 Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 49/126 (38%), Positives = 74/126 (58%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IAL+ + A+I EI R + +V RGQMEAA +LG+ + A R ++LPQA R IPPL +Q Sbjct: 89 IALAIHNGAYITEIFRGSIQSVDRGQMEAARSLGMPYSLAMRRIVLPQAFRQSIPPLGNQ 148 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++ LK+SSL VG ++L G +I Q ++ +I YL L ++ +N L Sbjct: 149 FIIGLKDSSLVAYVGLSELWGSGLSIAAGNFQQLDTYIIVGLYYLVLVLLFTYLVNLLEK 208 Query: 391 KIALKE 396 ++ KE Sbjct: 209 RLQRKE 214 >gi|254512274|ref|ZP_05124341.1| amino acid ABC transporter, permease protein [Rhodobacteraceae bacterium KLH11] gi|221535985|gb|EEE38973.1| amino acid ABC transporter, permease protein [Rhodobacteraceae bacterium KLH11] Length = 432 Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 46/118 (38%), Positives = 75/118 (63%), Gaps = 2/118 (1%) Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 L F V+ + F GS+V F+ + I ++ ++AA+IAE++R GL A+PRGQ EAA +L Sbjct: 276 LLFVASVMLSYFFPPGSSVD-LFLRVMIMITMFSAAYIAEVIRGGLAALPRGQYEAADSL 334 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS-VGGTIINQT 360 GL + +A RL++LPQA++ IP + + + L K+++L + DLV + G I+ T Sbjct: 335 GLDYPQAMRLIILPQALKISIPGIVNVAVGLFKDTTLVSVISMFDLVGMIRGPILAST 392 >gi|114046424|ref|YP_736974.1| polar amino acid ABC transporter inner membrane subunit [Shewanella sp. MR-7] gi|113887866|gb|ABI41917.1| polar amino acid ABC transporter, inner membrane subunit [Shewanella sp. MR-7] Length = 226 Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 43/123 (34%), Positives = 77/123 (62%), Gaps = 4/123 (3%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IA + A+I+EI+R+G+ AV +GQ EAA +LGL+ +L++LPQA+++I+P L ++ Sbjct: 101 IAFGLNSGAYISEIIRAGIQAVDKGQTEAARSLGLSQAMTMKLIILPQAIKNILPALGNE 160 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA----IEIILIWMFIYLSLSIMIALFMN 386 ++ LLK +++ +G DL+ G I ++T + LI++F+ S + M++ F Sbjct: 161 FIVLLKETAVIGFIGGVDLMRAGEIIRSRTFEDSIPLFTCALIYLFLTYSFTFMLSKFEK 220 Query: 387 RLN 389 RL Sbjct: 221 RLK 223 >gi|283783516|ref|YP_003374270.1| ABC transporter, permease protein [Gardnerella vaginalis 409-05] gi|283441667|gb|ADB14133.1| ABC transporter, permease protein [Gardnerella vaginalis 409-05] Length = 333 Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 51/143 (35%), Positives = 82/143 (57%), Gaps = 4/143 (2%) Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312 +F I + + + + LS +A+++EIVR+GL AV GQ+EAA ALG+ R Sbjct: 146 EFWSIDSNVIMTSLTAAVVGLSLNESAYLSEIVRAGLEAVDSGQVEAAKALGMGRALTMR 205 Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA-DLVSVGGTIINQTGQAIEIIL--- 368 V+LPQAMR I+PPL ++ + +LK +SL +AV F +L I N+ + I ++L Sbjct: 206 RVILPQAMRIIVPPLGNETIGMLKTTSLVLAVPFTLELQFATNAIANRIYKPIPLLLVAS 265 Query: 369 IWMFIYLSLSIMIALFMNRLNAK 391 IW I S+ +++ + + AK Sbjct: 266 IWYLIITSILMVLQYMLEKHFAK 288 >gi|158422441|ref|YP_001523733.1| ABC transporter permease protein [Azorhizobium caulinodans ORS 571] gi|158329330|dbj|BAF86815.1| ABC transporter permease protein [Azorhizobium caulinodans ORS 571] Length = 220 Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 42/131 (32%), Positives = 75/131 (57%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + +ALS Y +F AEI+R G++++ RGQ EA ALG+ + R V+LPQA++ ++P Sbjct: 90 FTAGILALSLYGGSFYAEIIRGGIVSIDRGQTEAGEALGMVPSQIMRRVVLPQALKRMVP 149 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PL +Q + KN+SL + DL+ G + + + +E+ + IY + + + Sbjct: 150 PLMNQSIIQFKNTSLVSVLAVPDLLYQGQVAAHDSYRPLELYTVIAIIYFLALFPLTVLV 209 Query: 386 NRLNAKIALKE 396 R A++A+ + Sbjct: 210 RRGEARLAVTD 220 Score = 36.6 bits (83), Expect = 6.7, Method: Compositional matrix adjust. Identities = 17/43 (39%), Positives = 25/43 (58%) Query: 110 IGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSV 152 IG L G +LS + V W+ Y+EVFR P LV + + Y ++ Sbjct: 37 IGLLAGLAKLSPFRPVGWLASAYIEVFRCTPVLVQLIWFYYAM 79 >gi|118469698|ref|YP_891108.1| amino acid ABC transporter permease, 3-TM region, His/Glu/Gln/Arg/opine family protein [Mycobacterium smegmatis str. MC2 155] gi|118170985|gb|ABK71881.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family protein [Mycobacterium smegmatis str. MC2 155] Length = 590 Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 48/125 (38%), Positives = 77/125 (61%), Gaps = 5/125 (4%) Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 AL AA+I EI RSG+ +V GQ+EAA ALG ++R + RLV++PQ +R ++P L +Q+ Sbjct: 446 ALGLMAAAYIGEIFRSGIQSVEAGQLEAARALGFSYRSSMRLVVVPQGVRRVLPALMNQF 505 Query: 332 LNLLKNSSLAVAVGF----ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387 ++LLK SSL +G +L VG + QTG ++ +F YL L+I + +N Sbjct: 506 ISLLKASSLVYFLGLIANQRELFQVGRDLNAQTGNLSPLVAAGLF-YLMLTIPLTHLVNY 564 Query: 388 LNAKI 392 ++ ++ Sbjct: 565 IDNRL 569 >gi|295397425|ref|ZP_06807512.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Aerococcus viridans ATCC 11563] gi|294974326|gb|EFG50066.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Aerococcus viridans ATCC 11563] Length = 727 Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 51/158 (32%), Positives = 85/158 (53%), Gaps = 23/158 (14%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 + LPL+ +S F+ FG+P + FN T+S + + LS Sbjct: 568 RGLPLIVMSFFIYFGIPQM------------------FNI----TISSNLAGI-LTLSLN 604 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 AA++ EIVR G+ A+ GQ EAA +LGLT+ + R ++LPQA++ ++P +Q++ LK Sbjct: 605 AAAYMGEIVRGGIQAIDTGQTEAARSLGLTNGQTMRHIILPQAVKVMVPSFINQFVITLK 664 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374 ++S+ +G +L G II +T Q+ + LI +Y Sbjct: 665 DTSILSVIGIVELTQTGRIIIARTYQSGSMWLIVGLMY 702 Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust. Identities = 23/62 (37%), Positives = 39/62 (62%) Query: 88 AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147 A+L G T +LA ++ ATI+G +G R S N +++ I VY+++ R +P +V+ FF Sbjct: 519 ALLSGLGTTVYLAIVSLVIATILGIFLGLMRTSGNVVLSGIATVYIDIMRGLPLIVMSFF 578 Query: 148 LY 149 +Y Sbjct: 579 IY 580 >gi|119383547|ref|YP_914603.1| polar amino acid ABC transporter, inner membrane subunit [Paracoccus denitrificans PD1222] gi|119373314|gb|ABL68907.1| L-glutamate ABC transporter membrane protein / L-asparagine ABC transporter membrane protein / L-glutamine ABC transporter membrane protein / L-aspartate ABC transporter membrane protein [Paracoccus denitrificans PD1222] Length = 484 Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 36/78 (46%), Positives = 57/78 (73%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I ++ + AA++AE++R GL A+P+GQ EAA ALGL + KA RL++LPQA++ IP + S Sbjct: 354 IMVTLFAAAYMAEVIRGGLAALPKGQYEAADALGLDYWKAQRLIILPQALKISIPGIVST 413 Query: 331 YLNLLKNSSLAVAVGFAD 348 ++ + K+++L V VG D Sbjct: 414 FIGMFKDTTLVVFVGLFD 431 >gi|17987492|ref|NP_540126.1| general L-amino acid transport system permease protein AAPM [Brucella melitensis bv. 1 str. 16M] gi|256044434|ref|ZP_05447338.1| general L-amino acid transport system permease protein AAPM [Brucella melitensis bv. 1 str. Rev.1] gi|260563785|ref|ZP_05834271.1| polar amino acid ABC transporter [Brucella melitensis bv. 1 str. 16M] gi|265990854|ref|ZP_06103411.1| amino acid ABC transporter permease [Brucella melitensis bv. 1 str. Rev.1] gi|17983190|gb|AAL52390.1| general l-amino acid transport system permease protein aapm [Brucella melitensis bv. 1 str. 16M] gi|260153801|gb|EEW88893.1| polar amino acid ABC transporter [Brucella melitensis bv. 1 str. 16M] gi|263001638|gb|EEZ14213.1| amino acid ABC transporter permease [Brucella melitensis bv. 1 str. Rev.1] Length = 343 Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 35/82 (42%), Positives = 59/82 (71%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I ++ + +A++AE+VR GL A+PRGQ E A ALGL++ + T LV+LPQA++ +IP + + Sbjct: 211 IGVALFASAYMAEVVRGGLQAIPRGQYEGADALGLSYWQKTGLVVLPQALKLVIPGIVNT 270 Query: 331 YLNLLKNSSLAVAVGFADLVSV 352 ++ L K++SL +G DL+ + Sbjct: 271 FIGLFKDTSLVYIIGMFDLLGI 292 >gi|229171200|ref|ZP_04298793.1| Amino acid ABC transproter, permease [Bacillus cereus MM3] gi|228612280|gb|EEK69509.1| Amino acid ABC transproter, permease [Bacillus cereus MM3] Length = 230 Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 48/126 (38%), Positives = 75/126 (59%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IAL+ + A+I EI R + +V RGQ+EAA +LG+ + A R ++LPQA R +PPL +Q Sbjct: 89 IALAIHNGAYITEIFRGSIQSVDRGQLEAARSLGMPYPLAMRRIVLPQAFRQSLPPLGNQ 148 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++ LK+SSL VG ++L G +I Q ++ +I YL L ++ F+N L Sbjct: 149 FIIGLKDSSLVAYVGLSELWGSGLSIAASNFQQLDTYIIVGLYYLVLVLLFTYFVNLLEK 208 Query: 391 KIALKE 396 ++ KE Sbjct: 209 RLQRKE 214 >gi|308235208|ref|ZP_07665945.1| ABC transporter, permease protein [Gardnerella vaginalis ATCC 14018] gi|311114810|ref|YP_003986031.1| ABC transporter system, permease [Gardnerella vaginalis ATCC 14019] gi|310946304|gb|ADP39008.1| ABC superfamily ATP binding cassette transporter system, permease protein [Gardnerella vaginalis ATCC 14019] Length = 330 Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 49/133 (36%), Positives = 79/133 (59%), Gaps = 1/133 (0%) Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312 +F I + V + I LS AA+++EIVR+GL AV GQ+EAA ALG+ R Sbjct: 143 EFFSIDSNVVMTSLNAAVIGLSLNEAAYLSEIVRAGLEAVDAGQVEAAQALGMGRSLTMR 202 Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA-DLVSVGGTIINQTGQAIEIILIWM 371 V+LPQAMR I+PPL ++ + +LK +SL +AV F +L + N+ + I ++++ Sbjct: 203 RVVLPQAMRIIVPPLGNETIGMLKTTSLVLAVPFTLELQFATNAVANRIYKPIPLLIVAS 262 Query: 372 FIYLSLSIMIALF 384 YL ++ ++ +F Sbjct: 263 IWYLIITSILMVF 275 >gi|300362120|ref|ZP_07058297.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus gasseri JV-V03] gi|300354739|gb|EFJ70610.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus gasseri JV-V03] Length = 216 Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 65/205 (31%), Positives = 99/205 (48%), Gaps = 34/205 (16%) Query: 193 SFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPTLVLIALKYQLHF 246 SF+LG+V ++ G + LPLL I F FGLP L Sbjct: 34 SFILGLVFGFIRYVKIKYLSTIVGFVIDIIRNLPLLLIIFFTYFGLPEL----------- 82 Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306 G +P S+ IAL + A +AEIVRSG+ AV GQME A + G+T Sbjct: 83 ------------GIVTNPTVASI-IALVVFEGAMLAEIVRSGIAAVDPGQMEGARSNGMT 129 Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 + +A V++PQA+ +IP L SQ+++L+K++SLA + +L+ I +Q Sbjct: 130 YMQAMYHVIIPQALNKMIPSLLSQFVSLVKDTSLATIIVLPELLFHAQIIYSQNTTY--- 186 Query: 367 ILIWMFIYLSLSIMIALFMNRLNAK 391 LI M++ +++ I F + AK Sbjct: 187 -LIPMYVIIAIMYFIVCFSLSMIAK 210 >gi|66044226|ref|YP_234067.1| amino acid ABC transporter permease [Pseudomonas syringae pv. syringae B728a] gi|63254933|gb|AAY36029.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Pseudomonas syringae pv. syringae B728a] Length = 280 Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 46/119 (38%), Positives = 74/119 (62%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IALS A+++EI R+G+I V GQ EAA+AL L + V LPQAMR+IIPP T+Q Sbjct: 151 IALSLNYGAYLSEIFRAGIIGVSVGQREAALALALRPTQIFWRVTLPQAMRTIIPPTTNQ 210 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 ++++LK+SSL +G +++ + + + + IE++ +Y +SI + L +RL Sbjct: 211 FISMLKDSSLISVMGVWEVMFLAQSYGRSSYRYIEMLTTAAVLYWIMSIGLELLQSRLE 269 >gi|50119798|ref|YP_048965.1| ABC transporter permease [Pectobacterium atrosepticum SCRI1043] gi|49610324|emb|CAG73768.1| ABC transporter permease protein [Pectobacterium atrosepticum SCRI1043] Length = 313 Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 53/183 (28%), Positives = 97/183 (53%), Gaps = 10/183 (5%) Query: 226 TFLIFGLPTLVLIALKYQL-------HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTA 278 T+ G+PTLV + L Y + P G+ + G+T+ F + +AL + + Sbjct: 102 TWFFRGVPTLVQLFLWYNIAALYPTISLSLPFFGEVFSVPGNTLISPFNAAVLALVMHQS 161 Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338 A+ AEIVR+G+ +V GQ+EAA ALG + ++PQAMR+I+PP ++ + LK + Sbjct: 162 AYAAEIVRAGIQSVNPGQLEAARALGYRKPQIFFYTVMPQAMRAILPPAGNEVIGQLKTT 221 Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL---FMNRLNAKIALK 395 ++ + D++ I +T + I ++L+ YL L+ ++++ ++ R + LK Sbjct: 222 AVVSVISLQDVLYSAQIIYQRTYEVIPLLLVATIWYLLLTSVLSVGQYYIERYFGRSTLK 281 Query: 396 EKK 398 K Sbjct: 282 RNK 284 >gi|319790880|ref|YP_004152520.1| polar amino acid ABC transporter, inner membrane subunit [Variovorax paradoxus EPS] gi|315593343|gb|ADU34409.1| polar amino acid ABC transporter, inner membrane subunit [Variovorax paradoxus EPS] Length = 222 Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 41/129 (31%), Positives = 77/129 (59%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P F+ + L Y+ A+++EIVR + ++ +GQ AA +LG+T A R ++LPQA+ + Sbjct: 87 PAFLCGVLGLGVYSGAYVSEIVRGAIQSIDKGQTMAAQSLGMTPGVAMREIVLPQAVVRM 146 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 IPPL ++++ L+KNS+L + D++ G II+ + +++E+ L +Y L+ + L Sbjct: 147 IPPLGNEFIALIKNSALVSLLTIHDVMHEGQKIISVSYRSLEVYLAIALVYFVLTGTMTL 206 Query: 384 FMNRLNAKI 392 + K+ Sbjct: 207 VLRHFEQKL 215 >gi|306835974|ref|ZP_07468966.1| amino acid ABC superfamily ATP binding cassette transporter [Corynebacterium accolens ATCC 49726] gi|304568140|gb|EFM43713.1| amino acid ABC superfamily ATP binding cassette transporter [Corynebacterium accolens ATCC 49726] Length = 317 Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 51/141 (36%), Positives = 81/141 (57%), Gaps = 4/141 (2%) Query: 260 STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319 S ++ F + L AA++AEIVRSG+ +VP GQ EA+ ALG++ R +LPQA Sbjct: 149 SVLTNAFFLAVMGLGLNEAAYMAEIVRSGISSVPEGQKEASKALGMSWWMTMRRTVLPQA 208 Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT-GQAIEIILI---WMFIYL 375 MR IIPP +++++LLK SSL VA+ + + T I+ Q I ++++ W + Sbjct: 209 MRIIIPPTGNEFISLLKTSSLVVAIPYTHEIFGRATDISAALFQPIPLLMVAASWYLVIT 268 Query: 376 SLSIMIALFMNRLNAKIALKE 396 SL ++ F+ R + A +E Sbjct: 269 SLLMVGQYFLERHFERGATRE 289 >gi|300173758|ref|YP_003772924.1| glutamine-binding protein/glutamine transport system permease [Leuconostoc gasicomitatum LMG 18811] gi|299888137|emb|CBL92105.1| Glutamine-binding protein / Glutamine transport system permease protein [Leuconostoc gasicomitatum LMG 18811] Length = 477 Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 50/176 (28%), Positives = 83/176 (47%), Gaps = 23/176 (13%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 + LPL+ ++ F+ GLP + + + P F + I L Sbjct: 324 RGLPLMVLAFFIYIGLPGVTGVKI-----------------------PAFTAGIITLILN 360 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 A+ VR G AV RGQMEAA +LGL + A R V++PQ +R ++P +Q++ LK Sbjct: 361 EGAYTGAFVRGGFEAVNRGQMEAARSLGLPYGSAMRRVIMPQGLRIMVPSFINQFIITLK 420 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 ++S+ A+G +L G I+ + Q + I IYL + ++ N + K+ Sbjct: 421 DTSILSAIGLLELTQTGTLIVARNSQGFRVWAIIAVIYLIVITLLTWLSNWVEKKL 476 >gi|227501796|ref|ZP_03931845.1| ABC superfamily ATP binding cassette transporter [Corynebacterium accolens ATCC 49725] gi|227077821|gb|EEI15784.1| ABC superfamily ATP binding cassette transporter [Corynebacterium accolens ATCC 49725] Length = 317 Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 51/141 (36%), Positives = 81/141 (57%), Gaps = 4/141 (2%) Query: 260 STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319 S ++ F + L AA++AEIVRSG+ +VP GQ EA+ ALG++ R +LPQA Sbjct: 149 SVLTNAFFLAVMGLGLNEAAYMAEIVRSGISSVPEGQKEASKALGMSWWMTMRRTVLPQA 208 Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT-GQAIEIILI---WMFIYL 375 MR IIPP +++++LLK SSL VA+ + + T I+ Q I ++++ W + Sbjct: 209 MRIIIPPTGNEFISLLKTSSLVVAIPYTHEIFGRATDISAALFQPIPLLMVAASWYLVIT 268 Query: 376 SLSIMIALFMNRLNAKIALKE 396 SL ++ F+ R + A +E Sbjct: 269 SLLMVGQYFLERHFERGATRE 289 >gi|15806050|ref|NP_294752.1| amino acid ABC transporter permease [Deinococcus radiodurans R1] gi|6458756|gb|AAF10601.1|AE001954_5 amino acid ABC transporter, permease protein [Deinococcus radiodurans R1] Length = 216 Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 69/208 (33%), Positives = 112/208 (53%), Gaps = 13/208 (6%) Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247 KI S VLG+V L+R K L L +I L+ G P LV I + + F Sbjct: 22 KITALSLVLGVVGGTLVA-LARLSPFKPLSWLALTFIE--LVRGTPLLVQI---FVIFFG 75 Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307 P L + EF + A S +AA++AEIVR+G+ +P+GQ EA+ +LGL+ Sbjct: 76 LPQLLEHPI-------NEFWAGVAAFSVNSAAYVAEIVRAGIQGLPKGQTEASRSLGLSP 128 Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367 + R ++LPQA ++PPL ++ ++LLKNSSL A+ +L G + ++T + E+ Sbjct: 129 AQTMRHIILPQAFTRVLPPLVNEAISLLKNSSLLSAISIVELTRAGQLVSSRTFKPFEMY 188 Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIALK 395 L IYL++++ ++ RL A+ ++ Sbjct: 189 LAVSLIYLAMTLFLSWVARRLEARWQVR 216 >gi|330953425|gb|EGH53685.1| amino acid ABC transporter permease [Pseudomonas syringae Cit 7] Length = 179 Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 44/129 (34%), Positives = 74/129 (57%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + I L+ + + ++EIVR L A+PRGQ+EA A+GL ++ R VLLPQAMR I+P Sbjct: 50 FQAGAIGLTLFCGSHVSEIVRGALQAIPRGQLEAGKAIGLRFGQSLRYVLLPQAMRQILP 109 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 + ++K S+L +G A+L+ +I +T +E L F++ ++ I L Sbjct: 110 TWVNSSTEIVKASTLLSVIGVAELLLSTQQVIARTFMTLEFYLFAGFLFFLINYAIELLG 169 Query: 386 NRLNAKIAL 394 ++ ++AL Sbjct: 170 RQIEKRVAL 178 >gi|298252593|ref|ZP_06976387.1| ABC-type amino acid transporter, permease component [Gardnerella vaginalis 5-1] gi|297532957|gb|EFH71841.1| ABC-type amino acid transporter, permease component [Gardnerella vaginalis 5-1] Length = 337 Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 51/143 (35%), Positives = 82/143 (57%), Gaps = 4/143 (2%) Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312 +F I + + + + LS +A+++EIVR+GL AV GQ+EAA ALG+ R Sbjct: 150 EFWSIDSNVIMTSLTAAVVGLSLNESAYLSEIVRAGLEAVDSGQVEAAKALGMGRALTMR 209 Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA-DLVSVGGTIINQTGQAIEIIL--- 368 V+LPQAMR I+PPL ++ + +LK +SL +AV F +L I N+ + I ++L Sbjct: 210 RVILPQAMRIIVPPLGNETIGMLKTTSLVLAVPFTLELQFATNAIANRIYKPIPLLLVAS 269 Query: 369 IWMFIYLSLSIMIALFMNRLNAK 391 IW I S+ +++ + + AK Sbjct: 270 IWYLIITSILMVLQYMLEKHFAK 292 >gi|163843016|ref|YP_001627420.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Brucella suis ATCC 23445] gi|163673739|gb|ABY37850.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Brucella suis ATCC 23445] Length = 385 Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 35/82 (42%), Positives = 59/82 (71%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I ++ + +A++AE+VR GL A+PRGQ E A ALGL++ + T LV+LPQA++ +IP + + Sbjct: 253 IGVALFASAYMAEVVRGGLQAIPRGQYEGADALGLSYWQKTGLVVLPQALKLVIPGIVNT 312 Query: 331 YLNLLKNSSLAVAVGFADLVSV 352 ++ L K++SL +G DL+ + Sbjct: 313 FIGLFKDTSLVYIIGMFDLLGI 334 >gi|117164567|emb|CAJ88113.1| putative ABC transporter permease protein [Streptomyces ambofaciens ATCC 23877] Length = 343 Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 65/225 (28%), Positives = 112/225 (49%), Gaps = 17/225 (7%) Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV---- 236 +T+ A V F+LG VL+ RLSR +T + + ++ +P +V Sbjct: 85 VTLQLTAYATVLGFLLGTVLAFM--RLSRSPVLQT-----VAWTYIWIFRSIPMIVQLVF 137 Query: 237 ---LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293 L AL +L P F + +++ + I L+ + AA+ AEIVR G+I+V Sbjct: 138 WFNLSALYQELGIGVPFGPVFWSVDSNSLIGTIGAAIIGLTLHQAAYAAEIVRGGVISVD 197 Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353 GQ+EAA ALG+ + R ++LPQAMR+I+P ++ + LLK +S+ + +L Sbjct: 198 HGQLEAAAALGIPRLRQIRRIVLPQAMRAILPTAGNEIIGLLKGTSVVYVMSIGELFYQV 257 Query: 354 GTIINQTGQAIEIILI---WMFIYLSLSIMIALFMNRLNAKIALK 395 I + G+ I ++L+ W + SL + ++ R A+ A + Sbjct: 258 QVIYGRNGRVIPLLLVATAWYVVLTSLLSVAQYYVERRYARGADR 302 >gi|84496803|ref|ZP_00995657.1| putative glutamate transporter permease protein [Janibacter sp. HTCC2649] gi|84383571|gb|EAP99452.1| putative glutamate transporter permease protein [Janibacter sp. HTCC2649] Length = 295 Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 51/165 (30%), Positives = 95/165 (57%), Gaps = 14/165 (8%) Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291 +P L+++ + L+ V S ++P ++ AL+ Y A IAE+VRSG+ + Sbjct: 116 VPVLIMMIFAFGLYAQNSVFA-------SDINP-LAAVITALTLYNGAVIAELVRSGVYS 167 Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 +P+GQ EA +A+GLT + R + LPQA+ +++P L Q++ +LK+S+L + +++L+S Sbjct: 168 LPKGQGEAGLAVGLTTGQVLRSIQLPQALTAMLPALIGQFVTVLKDSALGYQITYSELLS 227 Query: 352 VGGTII-----NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 GG I+ N I + ++++ I SLS + +RL+ + Sbjct: 228 -GGKILGSNFANTVPAYIVVAIVFILINYSLSRLAIYVEHRLSRR 271 Score = 38.5 bits (88), Expect = 1.8, Method: Compositional matrix adjust. Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 1/73 (1%) Query: 78 PYTSDSSYATAILV-GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136 P+ +D + LV G T A ++ A G + G GRLS + W+C VE F Sbjct: 54 PFVTDRAVWRDYLVPGLWGTLKAAAISIVLAGTFGLIFGIGRLSTIAPIRWLCGAVVEFF 113 Query: 137 RNIPPLVVIFFLY 149 R++P L+++ F + Sbjct: 114 RSVPVLIMMIFAF 126 >gi|309812123|ref|ZP_07705881.1| ABC transporter, permease protein [Dermacoccus sp. Ellin185] gi|308433810|gb|EFP57684.1| ABC transporter, permease protein [Dermacoccus sp. Ellin185] Length = 310 Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 52/145 (35%), Positives = 83/145 (57%), Gaps = 2/145 (1%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 +A+P + T L G+ TL L + F K + F + T+S I L Sbjct: 110 RAVPRYVLMTILGLGVLTL-YPTLDLGVPFGKDLGLTFYTLDVKTISSGITVGIIGLGLS 168 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 AA++AEI R+G+++V GQ EAA ALG+++ KA R ++LPQAMR I+PP ++ ++++K Sbjct: 169 EAAYMAEIARAGILSVDNGQREAAQALGMSNGKAMRRIILPQAMRVIVPPTGNEAISMVK 228 Query: 337 NSSLAVAVGF-ADLVSVGGTIINQT 360 ++SL AV A+L + + N T Sbjct: 229 DTSLLTAVPVTAELFNQAQNVANNT 253 Score = 37.7 bits (86), Expect = 3.2, Method: Compositional matrix adjust. Identities = 33/107 (30%), Positives = 56/107 (52%), Gaps = 6/107 (5%) Query: 104 MIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSI 163 MI ++G ++ RLS N ++ + VY+ FR +P V++ L VL++ P D + Sbjct: 77 MILGVVLGVILAIMRLSDNPVLRGVAFVYIWFFRAVPRYVLMTILGLGVLTLYPTLDLGV 136 Query: 164 VLPFGMFLNNRGLSFPTLTMDT-NAKIFVFSFVLGIVLSLFATRLSR 209 PFG L GL+F TL + T ++ I V LG+ + + ++R Sbjct: 137 --PFGKDL---GLTFYTLDVKTISSGITVGIIGLGLSEAAYMAEIAR 178 >gi|300858345|ref|YP_003783328.1| hypothetical protein cpfrc_00927 [Corynebacterium pseudotuberculosis FRC41] gi|300685799|gb|ADK28721.1| putative membrane protein [Corynebacterium pseudotuberculosis FRC41] gi|302206063|gb|ADL10405.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Corynebacterium pseudotuberculosis C231] gi|302330613|gb|ADL20807.1| Putative ABC transport system membrane protein [Corynebacterium pseudotuberculosis 1002] gi|308276299|gb|ADO26198.1| Putative ABC transport system membrane protein [Corynebacterium pseudotuberculosis I19] Length = 318 Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 48/135 (35%), Positives = 78/135 (57%), Gaps = 4/135 (2%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+ + L AA++AEIVRSGL AVP GQ EA+ ALG++ R +LPQAMR I+P Sbjct: 143 FLLAVLGLGLNEAAYMAEIVRSGLQAVPEGQTEASKALGMSWWMTIRRTVLPQAMRIIVP 202 Query: 326 PLTSQYLNLLKNSSLAVAVGF-ADLVSVGGTIINQTGQAIEIILI---WMFIYLSLSIMI 381 P +++++LLK +SL VA+ + A+L I + ++L+ W + SL ++ Sbjct: 203 PTGNEFISLLKTTSLVVAIPYTAELYGRATDIAAALFDPVPLLLVAATWYLVITSLLMIA 262 Query: 382 ALFMNRLNAKIALKE 396 ++ + + A +E Sbjct: 263 QSYLEKYFDRGATRE 277 >gi|229182749|ref|ZP_04309989.1| Amino acid ABC transproter, permease [Bacillus cereus BGSC 6E1] gi|228600722|gb|EEK58302.1| Amino acid ABC transproter, permease [Bacillus cereus BGSC 6E1] Length = 233 Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 49/126 (38%), Positives = 74/126 (58%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IAL+ + A+I EI R + +V RGQMEAA +LG+ + A R ++LPQA R IPPL +Q Sbjct: 92 IALAIHNGAYITEIFRGSIQSVDRGQMEAARSLGMPYSLAMRRIVLPQAFRQSIPPLGNQ 151 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++ LK+SSL VG ++L G +I Q ++ +I YL L ++ +N L Sbjct: 152 FIIGLKDSSLVAYVGLSELWGSGLSIAAGNFQQLDTYIIVGLYYLVLVLLFTYLVNLLEK 211 Query: 391 KIALKE 396 ++ KE Sbjct: 212 RLQRKE 217 >gi|157369721|ref|YP_001477710.1| glutamine ABC transporter permease [Serratia proteamaculans 568] gi|157321485|gb|ABV40582.1| polar amino acid ABC transporter, inner membrane subunit [Serratia proteamaculans 568] Length = 219 Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 41/129 (31%), Positives = 79/129 (61%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + + + + A+IAEI R ++++ G EA +ALGL+ R+ R V++P A+R ++P Sbjct: 90 FSAAVVTIMINSGAYIAEITRGAVLSIHSGFREAGLALGLSRRETIRYVIMPLALRRMLP 149 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PL +Q++ +K++SL + +G A+L G II +A+EI IYL ++++++ + Sbjct: 150 PLGNQWIISIKDTSLFIVIGVAELTRQGQEIIAGNFRALEIWSAVAVIYLIITLVLSFVL 209 Query: 386 NRLNAKIAL 394 RL ++ + Sbjct: 210 RRLERRMKI 218 >gi|323172273|gb|EFZ57911.1| glutamine transport system permease protein glnP [Escherichia coli LT-68] Length = 219 Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 58/198 (29%), Positives = 108/198 (54%), Gaps = 12/198 (6%) Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256 G+V+ L A +R F + L++I +I G P +V + Y F P+ FN Sbjct: 33 GLVIGLLAG-FARTFGGWIANHVALVFIE--VIRGTPIVVQVMFIY---FALPM--AFND 84 Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316 + + P F + + + + A+IAEI R ++++ +G EA +ALGL+ + R V+L Sbjct: 85 L---RIDP-FTAAVVTIMINSGAYIAEITRGAVLSIHKGFREAGLALGLSRWETIRYVIL 140 Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376 P A+R ++PPL +Q++ +K++SL + +G A+L G II +A+EI YL Sbjct: 141 PLALRRMLPPLGNQWIISIKDTSLFIVIGVAELTRQGQEIIASNFRALEIWSAVAVFYLI 200 Query: 377 LSIMIALFMNRLNAKIAL 394 ++++++ + RL ++ + Sbjct: 201 ITLVLSFILRRLERRMKI 218 >gi|256392977|ref|YP_003114541.1| polar amino acid ABC transporter inner membrane subunit [Catenulispora acidiphila DSM 44928] gi|256359203|gb|ACU72700.1| polar amino acid ABC transporter, inner membrane subunit [Catenulispora acidiphila DSM 44928] Length = 349 Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 57/175 (32%), Positives = 96/175 (54%), Gaps = 10/175 (5%) Query: 227 FLIFGLPTLVLIALKYQ-------LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279 +LI LP LV + Y+ L F P +F + + + + +IAL+ AA Sbjct: 137 WLIRSLPLLVQLLFWYEIASLYPRLSFGIPFGPEFAGVKTAHLFNGVFAAFIALTLDVAA 196 Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339 F +E++R G++AVP GQ+EAA ALGL + R ++LPQAM SIIP + + +LK +S Sbjct: 197 FSSELIRGGILAVPSGQVEAAQALGLGKGRIFRRIVLPQAMPSIIPASGNLLIGMLKATS 256 Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL---FMNRLNAK 391 + + DL+ I N+ Q I ++L+ Y++L+ ++++ F+ R A+ Sbjct: 257 VISVIAVQDLLYSTQLIYNENFQVIPLLLVATLWYIALTTVLSIGQYFVERHYAR 311 Score = 36.6 bits (83), Expect = 7.5, Method: Compositional matrix adjust. Identities = 28/84 (33%), Positives = 45/84 (53%), Gaps = 3/84 (3%) Query: 85 YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144 + +IL G T WL + + +IGT V A RLS N ++ + +V + R++P LV Sbjct: 88 FQASILHGLELTLWLTAAVLAAGYLIGTGVAAMRLSPNPILKSLSFGFVWLIRSLPLLVQ 147 Query: 145 IFFLYKSVLSVLPIPDHSIVLPFG 168 + F Y+ + S+ P S +PFG Sbjct: 148 LLFWYE-IASLY--PRLSFGIPFG 168 >gi|229817433|ref|ZP_04447715.1| hypothetical protein BIFANG_02695 [Bifidobacterium angulatum DSM 20098] gi|229785222|gb|EEP21336.1| hypothetical protein BIFANG_02695 [Bifidobacterium angulatum DSM 20098] Length = 327 Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 49/138 (35%), Positives = 81/138 (58%), Gaps = 1/138 (0%) Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312 +F I +V F + ++ L+ AA++AEIVR+GL AV GQ EAA ALG+ R Sbjct: 144 EFWSIDSQSVITAFNAAWLGLALNEAAYLAEIVRAGLEAVDPGQTEAAKALGMKRTLIMR 203 Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN-QTGQAIEIILIWM 371 ++LPQAMR IIPP ++++ +LK +SL AV F + T I+ + + I ++++ Sbjct: 204 RIILPQAMRIIIPPTGNEFIGMLKTTSLVNAVPFTLELQFATTAISTRLYKPIPLLIVAC 263 Query: 372 FIYLSLSIMIALFMNRLN 389 YL ++ ++ + +RL Sbjct: 264 IWYLVITSILMVIQSRLE 281 >gi|187926113|ref|YP_001892458.1| polar amino acid ABC transporter, inner membrane subunit [Ralstonia pickettii 12J] gi|241665601|ref|YP_002983960.1| polar amino acid ABC transporter inner membrane subunit [Ralstonia pickettii 12D] gi|187727867|gb|ACD29031.1| polar amino acid ABC transporter, inner membrane subunit [Ralstonia pickettii 12J] gi|240867628|gb|ACS65288.1| polar amino acid ABC transporter, inner membrane subunit [Ralstonia pickettii 12D] Length = 230 Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 40/86 (46%), Positives = 57/86 (66%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 EF++ ++ Y AF +E +R+G+ AVPRGQ EAA++LG T R A V+LPQA+R Sbjct: 89 EFLAAAFGIALYAGAFFSEELRAGIRAVPRGQREAALSLGFTPRAAFLRVVLPQALRVSA 148 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLV 350 PL Q N +KN+SLA+ +G A+L Sbjct: 149 LPLLGQCANTIKNTSLAMGIGLAELA 174 >gi|118587810|ref|ZP_01545220.1| probable amino-acid transmembrane abc transporter protein [Stappia aggregata IAM 12614] gi|118439432|gb|EAV46063.1| probable amino-acid transmembrane abc transporter protein [Stappia aggregata IAM 12614] Length = 241 Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 45/125 (36%), Positives = 71/125 (56%), Gaps = 3/125 (2%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IAL+ YT+A++AE+ R L A+P GQ E ALG+T + L++LPQA R I P Sbjct: 104 IALTLYTSAYLAEVWRGALTAIPSGQHEGGKALGMTFAQIMLLIILPQAFRLAIAPTVGF 163 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW---MFIYLSLSIMIALFMNR 387 + ++K +SLA +GF DL++VG N + +I+ IY SL ++++ R Sbjct: 164 MVQIIKGTSLAYIIGFHDLMTVGKRWANAPVPGTQPFVIYPLMAMIYFSLCFPLSVWSRR 223 Query: 388 LNAKI 392 L ++ Sbjct: 224 LERRL 228 >gi|224369395|ref|YP_002603559.1| GlnP6 [Desulfobacterium autotrophicum HRM2] gi|223692112|gb|ACN15395.1| GlnP6 [Desulfobacterium autotrophicum HRM2] Length = 223 Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 42/135 (31%), Positives = 79/135 (58%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P + I ++ + A+IAEIVR + ++ GQ EA ++GLT + ++ PQA + + Sbjct: 89 PPITAGIIIIAVNSGAYIAEIVRGSVQSIDPGQTEAGRSIGLTRSQTMAYIIWPQAFKRM 148 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 IPPL +Q++ LK++SL + +G +L+ G I+ + +A E+ L +YL++++ IA Sbjct: 149 IPPLGNQFIISLKDTSLLMVIGVGELLRTGQEIVAVSFKAFEVYLSVAVVYLAMTLSIAR 208 Query: 384 FMNRLNAKIALKEKK 398 + L + +K K+ Sbjct: 209 GLRILEHHLEMKTKR 223 >gi|163841375|ref|YP_001625780.1| amino acid ABC transporter permease protein [Renibacterium salmoninarum ATCC 33209] gi|162954851|gb|ABY24366.1| amino acid ABC transporter permease protein [Renibacterium salmoninarum ATCC 33209] Length = 298 Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 49/119 (41%), Positives = 74/119 (62%), Gaps = 3/119 (2%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F++ + L +A++AEI R+GL +V +GQ+EAA ALG+ K R ++LPQAMR I+P Sbjct: 149 FVASILGLGLNESAYLAEIFRAGLKSVDKGQIEAADALGIRKSKILRRIVLPQAMRVIVP 208 Query: 326 PLTSQYLNLLKNSSLAVAVG--FADLVSVGGTIINQTGQAIEIILIWMFIYLSL-SIMI 381 P ++ + +LK +SL VAV F +L + N+T I +LI F YL + SIM+ Sbjct: 209 PTGNETIGMLKTTSLVVAVPFLFGELTFATTALANKTFLPIPFLLIAAFWYLLITSIMM 267 >gi|153852847|ref|ZP_01994284.1| hypothetical protein DORLON_00266 [Dorea longicatena DSM 13814] gi|149754489|gb|EDM64420.1| hypothetical protein DORLON_00266 [Dorea longicatena DSM 13814] Length = 247 Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 55/170 (32%), Positives = 96/170 (56%), Gaps = 20/170 (11%) Query: 230 FGLPT-LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288 FG+P L I LKY+ +++ + V+P + +IAL+ +A+ AE++R+ Sbjct: 78 FGIPMILKAINLKYETNYN-----------ANGVAP-IIYAFIALAVNESAYNAEVIRAS 125 Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348 L +VP+GQ+EAA ALG+T+ +A R V+LP+A+ +P L + ++ L+K +SLA + Sbjct: 126 LESVPKGQIEAANALGMTYFQALRRVILPEAIVVALPSLGNSFIGLIKGTSLAFVCAVVE 185 Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 + + G I +T + E +Y+SL+I+ + + I L EKK Sbjct: 186 MTAAGKIIAGRTYRYFE-------VYVSLAIIYWIITIIVEQGIKLIEKK 228 >gi|295398457|ref|ZP_06808496.1| amino acid ABC superfamily ATP binding cassette transporter [Aerococcus viridans ATCC 11563] gi|294973321|gb|EFG49109.1| amino acid ABC superfamily ATP binding cassette transporter [Aerococcus viridans ATCC 11563] Length = 506 Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 66/212 (31%), Positives = 108/212 (50%), Gaps = 23/212 (10%) Query: 186 NAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH 245 +A F ++G L+L RLS + K + YI ++ G P ++ + Y Sbjct: 313 SATAIFFGLIIGAALALM--RLSEN---KLVDLIAQAYIE--VVRGTPLMIQVLFVY--- 362 Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305 LG G ST++ S +A+S + A+IAEI+R G+ +V +GQ EAA +LGL Sbjct: 363 -----LGFAGMFGWSTMT----SGLVAVSLNSGAYIAEIIRGGISSVDKGQAEAARSLGL 413 Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365 + R V+ PQ++RSI P L +++++L+K SS+ +G A+L + T I Sbjct: 414 GYWTTMRKVIFPQSLRSIWPSLGNEFVSLIKESSIVSTIGVAELTFQTRNVSTITFNGII 473 Query: 366 IILIWMFIYLSLSIMIALFMN----RLNAKIA 393 ++I M IY L+ + +N R+N K A Sbjct: 474 PLIISMAIYFMLTFTLTKLLNVYERRMNEKYA 505 Score = 40.8 bits (94), Expect = 0.34, Method: Compositional matrix adjust. Identities = 22/67 (32%), Positives = 36/67 (53%) Query: 83 SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142 ++YA + G T ++ + + IIG + RLS NKLV I + Y+EV R P + Sbjct: 296 AAYAPYFVNGLKTTLVISATAIFFGLIIGAALALMRLSENKLVDLIAQAYIEVVRGTPLM 355 Query: 143 VVIFFLY 149 + + F+Y Sbjct: 356 IQVLFVY 362 >gi|77409325|ref|ZP_00786028.1| amino acid ABC transporter, permease protein [Streptococcus agalactiae COH1] gi|77172057|gb|EAO75223.1| amino acid ABC transporter, permease protein [Streptococcus agalactiae COH1] Length = 201 Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 39/119 (32%), Positives = 75/119 (63%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I +S + A+I+EIVR+G+ AVP GQ+EAA +LG+ + R V+LPQA +I+P L ++ Sbjct: 72 IIISLNSGAYISEIVRAGIEAVPSGQIEAAYSLGIRPKNTLRYVILPQAFXNILPALGNE 131 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 ++ ++K+S+L +G +L + +++ T + +L F YL L+ +++ + ++ Sbjct: 132 FITIIKDSALLQTIGVMELWNGAQSVVTATYSPVAPLLFAAFYYLMLTTILSALLKQME 190 >gi|300719077|ref|YP_003743880.1| Polar amino acid ABC transporter, inner membrane subunit [Erwinia billingiae Eb661] gi|299064913|emb|CAX62033.1| Polar amino acid ABC transporter, inner membrane subunit [Erwinia billingiae Eb661] Length = 507 Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 57/156 (36%), Positives = 88/156 (56%), Gaps = 11/156 (7%) Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286 +++ G P L+ + L Y VL QF G SP F+S +AL AF AEI+R Sbjct: 58 YILRGTPVLLQLILLYN------VLPQF----GLRFSP-FLSALLALMINETAFCAEIIR 106 Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346 G++A R Q AA A G + K V++PQA+R+I+P + ++ + LLK++SLA VG Sbjct: 107 GGILATDRNQRTAAQAFGYSRTKEMIHVVIPQALRAILPTMGNEAVGLLKSTSLASVVGV 166 Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382 +L G TI++Q I +++ IY+ LS ++A Sbjct: 167 NELTMRGQTIVSQNFLFIPVLVASGGIYMILSSLLA 202 >gi|218548331|ref|YP_002382122.1| glutamine ABC transporter permease [Escherichia fergusonii ATCC 35469] gi|218355872|emb|CAQ88487.1| glutamine transporter subunit ; membrane component of ABC superfamily [Escherichia fergusonii ATCC 35469] gi|324112751|gb|EGC06727.1| His/Glu/Gln/Arg/opine family protein amino ABC transporter [Escherichia fergusonii B253] Length = 219 Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 58/198 (29%), Positives = 108/198 (54%), Gaps = 12/198 (6%) Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256 G+V+ L A +R F + L++I +I G P +V + Y F P+ FN Sbjct: 33 GLVIGLLAG-FARTFGGWIANHIALVFIE--VIRGTPIVVQVMFIY---FALPM--AFND 84 Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316 + + P F + + + + A+IAEI R ++++ +G EA +ALGL+ + R V+L Sbjct: 85 L---RIDP-FTAAVVTIMINSGAYIAEITRGAVLSIHKGFREAGLALGLSRWETIRYVIL 140 Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376 P A+R ++PPL +Q++ +K++SL + +G A+L G II +A+EI YL Sbjct: 141 PLALRRMLPPLGNQWIISIKDTSLFIVIGVAELTRQGQEIIAGNFRALEIWSAVAVFYLI 200 Query: 377 LSIMIALFMNRLNAKIAL 394 ++++++ + RL ++ + Sbjct: 201 ITLVLSFILRRLERRMKI 218 >gi|92117597|ref|YP_577326.1| amino acid ABC transporter permease [Nitrobacter hamburgensis X14] gi|91800491|gb|ABE62866.1| amino acid ABC transporter membrane protein 2, PAAT family [Nitrobacter hamburgensis X14] Length = 506 Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 38/96 (39%), Positives = 62/96 (64%) Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315 F+ G+ + + I ++ + A+ AE++R GL A+PRGQ EAA ALGL++ K T L++ Sbjct: 359 FLPGNFTVDGLVRVLIGVALFAGAYNAEVIRGGLAAIPRGQAEAAHALGLSYWKTTGLIV 418 Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 +PQA+R +IP L + ++ L K++SL V DL+ Sbjct: 419 MPQALRHVIPGLVNSFIALFKDTSLVSIVALFDLLG 454 >gi|77456471|ref|YP_345976.1| amino acid ABC transporter permease [Pseudomonas fluorescens Pf0-1] gi|77380474|gb|ABA71987.1| Diaminopimelate ABC transporter membrane protein / L-cystine ABC transporter membrane protein [Pseudomonas fluorescens Pf0-1] Length = 221 Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 57/193 (29%), Positives = 103/193 (53%), Gaps = 16/193 (8%) Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265 RLSR K+ L +Y+S F G P LV + + +++ P LG + P Sbjct: 44 RLSRF---KSVSWLARIYVSFFR--GTPLLVQL---FVIYYGLPQLGM-------ELDPL 88 Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 +L I S AA+ EI+R+ + ++ RGQ EAA ++G+T + R +LPQAMR+ +P Sbjct: 89 PAAL-IGFSLNMAAYACEILRAAIGSIERGQWEAAASIGMTRAQTLRRAILPQAMRTALP 147 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PL + +++L+K+++LA + +L I +T + + L IY L+ +++ F Sbjct: 148 PLGNSFISLVKDTALAATIQVPELFRQAQLITARTFEVFTMYLAAALIYWILATVLSHFQ 207 Query: 386 NRLNAKIALKEKK 398 N+L ++ +++ Sbjct: 208 NKLEERVNRHDQE 220 Score = 36.2 bits (82), Expect = 9.7, Method: Compositional matrix adjust. Identities = 16/32 (50%), Positives = 21/32 (65%) Query: 118 RLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 RLS K V+W+ R+YV FR P LV +F +Y Sbjct: 44 RLSRFKSVSWLARIYVSFFRGTPLLVQLFVIY 75 >gi|329295880|ref|ZP_08253216.1| polar amino acid ABC transporter inner membrane subunit [Plautia stali symbiont] Length = 214 Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 56/156 (35%), Positives = 87/156 (55%), Gaps = 9/156 (5%) Query: 251 LGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306 LGQF I S V P F+ +ALS TAA+ AEI+R L+AVP GQ+EA +A G++ Sbjct: 49 LGQFGVIRHSFVWPFLREPFICAVLALSLCTAAYTAEILRGALLAVPAGQVEAGLACGMS 108 Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 R ++ P +R +P +++ + L+K+++LA V D+ V II +T + +E+ Sbjct: 109 RWLLLRHIIAPIMLRYALPAYSTEAILLVKSTALASLVTVWDVTGVAQQIIQRTYRTMEV 168 Query: 367 ILIWMFIYLSLSIMI----ALFMNRLNAKIALKEKK 398 + IYL L+ +I AL RL + + EKK Sbjct: 169 FVCAAAIYLILNFIIVQLYALLERRLTS-VHRAEKK 203 >gi|303325414|ref|ZP_07355857.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Desulfovibrio sp. 3_1_syn3] gi|302863330|gb|EFL86261.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Desulfovibrio sp. 3_1_syn3] Length = 267 Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 65/206 (31%), Positives = 105/206 (50%), Gaps = 19/206 (9%) Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247 KI V S + L L T L R + L Y+ +I G+P LV QL + Sbjct: 72 KITVMSICCAVPLGLL-TGLGRISRNRAINLLASTYVE--VIRGIPLLV------QLFYI 122 Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307 L +F I G T S IA+S A++ E+ R+G++A+ +GQ EAA +LG Sbjct: 123 YYALSRFFQISGIT------SAVIAISVCYGAYMGEVFRAGIMAISKGQSEAARSLGFNR 176 Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE-- 365 + V+LPQA R+I+PP+ ++ + +LK++SL + D++ + + T E Sbjct: 177 FQTMFYVVLPQAWRTILPPVGNECIAMLKDTSLVSIMAVPDIMQRARSFVGTTYLYFETY 236 Query: 366 --IILIWMFIYLSLSIMIALFMNRLN 389 I LI++ I L+LS +++ +RLN Sbjct: 237 TVIALIYLIITLALSKAVSIMESRLN 262 Score = 42.7 bits (99), Expect = 0.088, Method: Compositional matrix adjust. Identities = 23/58 (39%), Positives = 33/58 (56%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 G V TF + + A +G L G GR+S N+ + + YVEV R IP LV +F++Y Sbjct: 66 GVVVTFKITVMSICCAVPLGLLTGLGRISRNRAINLLASTYVEVIRGIPLLVQLFYIY 123 >gi|257866172|ref|ZP_05645825.1| amino acid ABC transporter [Enterococcus casseliflavus EC30] gi|257872503|ref|ZP_05652156.1| amino acid ABC transporter [Enterococcus casseliflavus EC10] gi|257875807|ref|ZP_05655460.1| amino acid ABC transporter [Enterococcus casseliflavus EC20] gi|257800106|gb|EEV29158.1| amino acid ABC transporter [Enterococcus casseliflavus EC30] gi|257806667|gb|EEV35489.1| amino acid ABC transporter [Enterococcus casseliflavus EC10] gi|257809973|gb|EEV38793.1| amino acid ABC transporter [Enterococcus casseliflavus EC20] Length = 218 Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 53/173 (30%), Positives = 91/173 (52%), Gaps = 37/173 (21%) Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246 + I VFS VLG+V+ + + LPLL I F F LP I +++ + Sbjct: 46 SSIPVFSKVLGVVIDVI-------------RNLPLLLIIFFTYFALPQ---IGIRFNI-- 87 Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306 F S +AL+ + +A ++EI R+GL +VP+GQMEA ++ GL+ Sbjct: 88 -------------------FWSAVVALTIFESAMLSEIFRAGLNSVPKGQMEAGLSTGLS 128 Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359 + + R +++PQA ++++P + SQ ++L+K++SLAV + +L I Q Sbjct: 129 YVEVLRSIVVPQAFKAMLPAIVSQLISLIKDTSLAVIISLPELTHHARIIYGQ 181 >gi|326384497|ref|ZP_08206177.1| glutamate abc transporter integral membrane subunit glud [Gordonia neofelifaecis NRRL B-59395] gi|326196842|gb|EGD54036.1| glutamate abc transporter integral membrane subunit glud [Gordonia neofelifaecis NRRL B-59395] Length = 299 Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 44/123 (35%), Positives = 75/123 (60%), Gaps = 8/123 (6%) Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290 +P L+L+ Y L ++ + S +S F ++ L+ Y + IAEI+R+G++ Sbjct: 115 AIPVLILMFFAYYL------FAKYAVVPSSQLS--FAAVVFGLTLYNGSVIAEILRAGIL 166 Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 AVP+GQ EAA ++GL + R++LLPQA+ +++P L SQ + LK+S+L A G+ ++V Sbjct: 167 AVPKGQSEAASSIGLRKSQMMRMILLPQAVTAMLPALISQMVIALKDSALGYAFGYIEVV 226 Query: 351 SVG 353 G Sbjct: 227 RSG 229 Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust. Identities = 30/72 (41%), Positives = 44/72 (61%) Query: 78 PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137 P+T ++ T +L G T AF ++ A I+G L+G GRLS ++ V + V VEVFR Sbjct: 55 PFTVAGTWTTWLLPGLWGTIKAAFVSIVLALILGALLGIGRLSDHRWVRVVSGVIVEVFR 114 Query: 138 NIPPLVVIFFLY 149 IP L+++FF Y Sbjct: 115 AIPVLILMFFAY 126 >gi|148253605|ref|YP_001238190.1| ABC transporter permease [Bradyrhizobium sp. BTAi1] gi|146405778|gb|ABQ34284.1| amino acid ABC transporter membrane protein, PAAT family [Bradyrhizobium sp. BTAi1] Length = 285 Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 48/171 (28%), Positives = 93/171 (54%), Gaps = 5/171 (2%) Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVS--PEFMSLYIALSCYTAAFIAE 283 T+L G P ++ + L + L P +G V F++ + L A+ +E Sbjct: 108 TWLFRGTPLILQLLLWFNLALVFPTIGIPGLWSARAVDVMTPFLAALLGLGINQGAYTSE 167 Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343 ++R+GL++V GQ EAA A+G+ +A R ++LPQAMR +IPPL ++++ L+K +SLA Sbjct: 168 VMRAGLLSVDIGQYEAAQAIGMGRLQALRRIILPQAMRVVIPPLGNEFIGLVKATSLASV 227 Query: 344 VGFADLVSVGGTIINQTGQAIEIILI---WMFIYLSLSIMIALFMNRLNAK 391 + + +++ I + IE++++ W + +S+ + + + R A+ Sbjct: 228 IQYPEVLHSAENIYYANSRVIELLIVAGLWYLLVVSILTPLQMLLERRFAR 278 >gi|123966463|ref|YP_001011544.1| ABC transporter for amino acids, membrane component [Prochlorococcus marinus str. MIT 9515] gi|123200829|gb|ABM72437.1| ABC transporter for amino acids, membrane component [Prochlorococcus marinus str. MIT 9515] Length = 339 Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 64/251 (25%), Positives = 117/251 (46%), Gaps = 40/251 (15%) Query: 165 LPFGMFLNNRGLSFP----------TLTMDTNAKIFVFSFVLGIVL------SLFATRLS 208 +P G++L N GL TLT+ + +FS +GIVL S+F + Sbjct: 108 VPLGIYLLNGGLGLVPVMTRHWGGLTLTILITSCSILFSLPIGIVLALCRRSSMFLIQKL 167 Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268 F+ +A+PL+ + F +P + + L+ + Sbjct: 168 SSFYIDVMRAVPLIAVLFFGQLLIPLFLPVGLEIE---------------------RVWR 206 Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328 IA + + +A+IAE +R GL ++P Q+EAA +LGL + +L+PQA+R +P +T Sbjct: 207 AIIAFTLFVSAYIAEDIRGGLQSIPNNQIEAAKSLGLNKYQVNIFILIPQALRVALPAIT 266 Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQ---TGQAIEIILIWMFIYLSLSIMIALFM 385 +Q + L +N+SL +G +L+ V +I+ GQ IE+ + +Y ++A Sbjct: 267 NQLIGLFQNTSLMSILGLMELLGVSRSILANPEFIGQYIEVYIWLASVYWLFCTVMAFVS 326 Query: 386 NRLNAKIALKE 396 +L ++ + + Sbjct: 327 KKLEQRMTINK 337 >gi|116254212|ref|YP_770050.1| transmembrane component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] gi|115258860|emb|CAK09968.1| putative transmembrane component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] Length = 230 Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 63/211 (29%), Positives = 105/211 (49%), Gaps = 18/211 (8%) Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV-LIALKYQ 243 T + V S + G++L FA L R + + YI +L G P LV LIA+ Sbjct: 24 TTVWLTVVSLIAGLILG-FALALMRRSSRRVPYYIAKAYI--WLFRGTPLLVQLIAIYTA 80 Query: 244 LHFDKPVLG-QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302 L P+ G +F I + + L+ AA++AEI+R+G+ AVP GQ AA A Sbjct: 81 L----PLFGIKFTVIEAAL---------LGLALNEAAYLAEIIRAGIEAVPEGQTRAARA 127 Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362 LG+T R+ R +++PQA + I+PPL + LLK +S+ + +L+ +I + Sbjct: 128 LGMTERQIMRYIVMPQAFKVIVPPLGNSVNGLLKTTSVTSVISVEELLRRTQVLIQERFM 187 Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393 +E+ + YL L+ + F + + ++ Sbjct: 188 VLELFAVAAIYYLLLTTLWDFFQSHIEKRLG 218 >gi|21264490|sp|P52625|PATM_VIBHA RecName: Full=Probable amino-acid ABC transporter permease protein patM gi|15080757|gb|AAA78255.2| membrane protein [Vibrio harveyi] Length = 223 Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 57/170 (33%), Positives = 97/170 (57%), Gaps = 15/170 (8%) Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALK 241 TM+ VFS +L ++L+ R F L LYIS F G P LV + L Sbjct: 22 TMEMATWGLVFSLILSVILANI-----RVFKLPVLDQLSQLYISFFR--GTPLLVQLFL- 73 Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301 L++ P + F F+ G F + I L+ + AA++AE +R+ +I + R QMEA++ Sbjct: 74 --LYYGLPQI--FPFMVGIDA---FSAAVIGLTLHFAAYMAESIRAAIIGIDRSQMEASL 126 Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 ++G+T +A R V+LPQA R +P L + +++++K++SLA +G A++++ Sbjct: 127 SVGMTTTQAMRRVILPQATRVALPSLMNYFIDMIKSTSLAFTLGVAEIMA 176 >gi|315646647|ref|ZP_07899764.1| polar amino acid ABC transporter, inner membrane subunit [Paenibacillus vortex V453] gi|315277973|gb|EFU41294.1| polar amino acid ABC transporter, inner membrane subunit [Paenibacillus vortex V453] Length = 480 Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 60/207 (28%), Positives = 110/207 (53%), Gaps = 18/207 (8%) Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251 F F+LG++++L R K K L YI +I G P LV + + +H+ L Sbjct: 292 FGFILGLIIALM-----RMSGVKILKFLATAYIE--IIRGTPMLVQL---FIIHYS---L 338 Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311 F+ SP S + LS +AA++AEI R+G+ V RGQ+EAA +LG+T KA Sbjct: 339 AAFDI----KFSP-IQSGILTLSINSAAYLAEIFRAGIQGVDRGQLEAARSLGMTRGKAM 393 Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371 R ++LPQA++ ++P + ++++ ++K SS+ +G D++ + T + +L+ Sbjct: 394 RHIILPQALKGVLPAIGNEFVVIIKESSIVSFIGVYDIMYQAQILRGSTFAPLNPLLVAA 453 Query: 372 FIYLSLSIMIALFMNRLNAKIALKEKK 398 IY L+ +++ + K++ + + Sbjct: 454 MIYFILTFVLSKLLGVWERKLSASDNR 480 >gi|254713863|ref|ZP_05175674.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Brucella ceti M644/93/1] gi|254717080|ref|ZP_05178891.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Brucella ceti M13/05/1] gi|261218891|ref|ZP_05933172.1| polar amino acid ABC transporter [Brucella ceti M13/05/1] gi|261321610|ref|ZP_05960807.1| polar amino acid ABC transporter [Brucella ceti M644/93/1] gi|260923980|gb|EEX90548.1| polar amino acid ABC transporter [Brucella ceti M13/05/1] gi|261294300|gb|EEX97796.1| polar amino acid ABC transporter [Brucella ceti M644/93/1] Length = 385 Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 35/82 (42%), Positives = 59/82 (71%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I ++ + +A++AE+VR GL A+PRGQ E A ALGL++ + T LV+LPQA++ +IP + + Sbjct: 253 IGVALFASAYMAEVVRGGLQAIPRGQYEGADALGLSYWQKTGLVVLPQALKLVIPGIVNT 312 Query: 331 YLNLLKNSSLAVAVGFADLVSV 352 ++ L K++SL +G DL+ + Sbjct: 313 FIGLFKDTSLVYIIGMFDLLGI 334 >gi|187919540|ref|YP_001888571.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia phytofirmans PsJN] gi|187717978|gb|ACD19201.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia phytofirmans PsJN] Length = 250 Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 48/147 (32%), Positives = 83/147 (56%), Gaps = 4/147 (2%) Query: 251 LGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306 +GQF I S + P +M ++L+ TA + AEI+R GL+AVP GQ+EA ++GL+ Sbjct: 78 MGQFGVIRESFLWPVLREPYMCAVLSLALCTAGYTAEIIRGGLMAVPVGQIEAGYSIGLS 137 Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 R V+ P A+R +P +++ + L+K+++LA V ++ V II QT + E+ Sbjct: 138 GFALLRRVIGPIALRQCLPAYSTEAVLLVKSTALASLVTVWEVTGVAQQIIQQTYRTTEV 197 Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIA 393 + IYL L+ +I + L +++ Sbjct: 198 FICAALIYLFLNFVIVRLLGMLETRLS 224 >gi|148260140|ref|YP_001234267.1| polar amino acid ABC transporter, inner membrane subunit [Acidiphilium cryptum JF-5] gi|326402908|ref|YP_004282989.1| putative amino acid ABC transporter permease [Acidiphilium multivorum AIU301] gi|146401821|gb|ABQ30348.1| amino acid ABC transporter membrane protein, PAAT family [Acidiphilium cryptum JF-5] gi|325049769|dbj|BAJ80107.1| putative amino acid ABC transporter permease protein [Acidiphilium multivorum AIU301] Length = 250 Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 55/168 (32%), Positives = 96/168 (57%), Gaps = 3/168 (1%) Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFI--GGSTVSPEFMSLYIALSCYTAAFIAEI 284 FL+ G P LV I Y +L +F+ I GG T++ + +AL A++AEI Sbjct: 64 FLMRGTPLLVQIVFIYTGLAAAGIL-RFHDIHLGGLTLAGNVQAGILALGLNEGAYMAEI 122 Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344 R+G+ AV RGQ EAA +LG+ + R V+LPQA+R ++ P+ +Q+ +LKNS+L + Sbjct: 123 FRAGIDAVDRGQTEAAKSLGMVPWQILRYVVLPQALRVVLLPIGNQFNIMLKNSTLVSVI 182 Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 G ++++ V TI + T + E+ + +L+L+ + M ++ ++ Sbjct: 183 GVSEMLLVTETINSATFRTFELYSVLALYFLALTTIWGAVMAQVERRM 230 >gi|306843690|ref|ZP_07476290.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Brucella sp. BO1] gi|306276000|gb|EFM57709.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Brucella sp. BO1] Length = 385 Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 35/82 (42%), Positives = 59/82 (71%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I ++ + +A++AE+VR GL A+PRGQ E A ALGL++ + T LV+LPQA++ +IP + + Sbjct: 253 IGVALFASAYMAEVVRGGLQAIPRGQYEGADALGLSYWQKTGLVVLPQALKLVIPGIVNT 312 Query: 331 YLNLLKNSSLAVAVGFADLVSV 352 ++ L K++SL +G DL+ + Sbjct: 313 FIGLFKDTSLVYIIGMFDLLGI 334 >gi|296268320|ref|YP_003650952.1| polar amino acid ABC transporter inner membrane subunit [Thermobispora bispora DSM 43833] gi|296091107|gb|ADG87059.1| polar amino acid ABC transporter, inner membrane subunit [Thermobispora bispora DSM 43833] Length = 277 Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 71/210 (33%), Positives = 106/210 (50%), Gaps = 28/210 (13%) Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249 + F FVLG+VL+L RLS + A YI F GLP LV+ + L P Sbjct: 83 YAFGFVLGLVLALM--RLSSVGPYRWIAAT---YIEIFR--GLPALVIFLMIINLPLAFP 135 Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309 F G + + L +AA++AE R+GL AVP+GQMEAA +LG+ + + Sbjct: 136 ---GFRLPGDV-----YGQAALGLGLVSAAYMAETFRAGLQAVPKGQMEAARSLGMPYMR 187 Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF----ADLVSVG----GTIINQTG 361 A +++PQA+R +IPPLT++ + L K+SSL + +G A+L G T N T Sbjct: 188 AMVSIIIPQAVRIVIPPLTNELVLLFKDSSLVLFLGVTASQAELAKFGNDEAATFANPT- 246 Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 I + YL +++ + RL A+ Sbjct: 247 ----PIFVAGVTYLLITVPLGYLARRLEAR 272 >gi|293397048|ref|ZP_06641322.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Serratia odorifera DSM 4582] gi|291420519|gb|EFE93774.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Serratia odorifera DSM 4582] Length = 219 Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 41/129 (31%), Positives = 79/129 (61%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + + + + A+IAEI R ++++ G EA +ALGL+ R+ R V++P A+R ++P Sbjct: 90 FTAAVVTIMINSGAYIAEITRGAVLSIHSGFREAGLALGLSRRETIRYVVMPLALRRMLP 149 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PL +Q++ +K++SL + +G A+L G II +A+EI IYL ++++++ + Sbjct: 150 PLGNQWIISIKDTSLFIVIGVAELTRQGQEIIAGNFRALEIWSAVAVIYLIITLVLSFVL 209 Query: 386 NRLNAKIAL 394 RL ++ + Sbjct: 210 RRLERRMKI 218 >gi|289424103|ref|ZP_06425889.1| amino acid ABC transporter, permease protein [Peptostreptococcus anaerobius 653-L] gi|289155528|gb|EFD04207.1| amino acid ABC transporter, permease protein [Peptostreptococcus anaerobius 653-L] Length = 205 Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 62/209 (29%), Positives = 99/209 (47%), Gaps = 33/209 (15%) Query: 191 VFSFVLGIVLSLFATRLSRH--------FHEKTGKALPLLYISTFLIFGLPTLVLIALKY 242 VFS LG++++ R+S++ F+ + PLL FL +GLP L Sbjct: 17 VFSIPLGLLVA--QVRISKNKLARSVTSFYIWIMRGSPLLLQMMFLYYGLPLL-----NE 69 Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302 L FDK + IA + AA+ AEI RSGL ++ RGQ EAA Sbjct: 70 NLVFDKMPIA-----------------VIAFTINYAAYYAEIFRSGLESIDRGQYEAAKV 112 Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362 LG R +++PQ ++ ++PP++++++NL+K++SL +G DL + N+ Sbjct: 113 LGFDKWTMNRRIIIPQVIKRVLPPVSNEFINLVKDTSLVSVLGLNDLFRIATAASNREAS 172 Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAK 391 + L IYL L+ +I L K Sbjct: 173 LMP-FLYAAIIYLVLTALITQLFASLEKK 200 >gi|57237730|ref|YP_178978.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Campylobacter jejuni RM1221] gi|57166534|gb|AAW35313.1| amino acid ABC tansporter, permease protein, His/Glu/Gln/Arg/opine family [Campylobacter jejuni RM1221] gi|315058341|gb|ADT72670.1| Putative amino acid ABC tansporter permease protein [Campylobacter jejuni subsp. jejuni S3] Length = 247 Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 65/216 (30%), Positives = 120/216 (55%), Gaps = 33/216 (15%) Query: 153 LSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFH 212 + +L I D S V+ +G NAK ++ S+++ ++L+ A + Sbjct: 25 IEILKIQDPSGVVSYGY--------------TENAKAYLKSYLITLLLTACAVIIGVI-- 68 Query: 213 EKTGKALPLLYISTFLIFGLPTLVLIALKY-QLHFDKPVLGQ---FNFIGGSTVSPEFMS 268 G +L +LY S F TL I +Y + PV+ Q F F+ + + + + Sbjct: 69 --IGFSLAILYFSKF-----KTLNFIIDEYIDIIRGTPVILQLMIFAFVIFTFIDNLYAA 121 Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328 + +AL ++A+IAEIVRSG+ +V +GQMEAA A+GL ++ + + ++LPQA ++I+P L Sbjct: 122 I-LALGLNSSAYIAEIVRSGINSVDKGQMEAARAMGLDYKTSMKEIILPQATKNILPALA 180 Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364 +++++L K +S+ VGF ++ + T+ +Q+ QA+ Sbjct: 181 NEFISLFKETSV---VGFISVIDI--TMQSQSLQAV 211 >gi|325496746|gb|EGC94605.1| glutamine ABC transporter permease protein [Escherichia fergusonii ECD227] Length = 219 Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 58/198 (29%), Positives = 108/198 (54%), Gaps = 12/198 (6%) Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256 G+V+ L A +R F + L++I +I G P +V + Y F P+ FN Sbjct: 33 GLVIGLLAG-FARTFGGWIANHIALVFIE--VIRGTPIVVQVMFIY---FALPM--AFND 84 Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316 + + P F + + + + A+IAEI R ++++ +G EA +ALGL+ + R V+L Sbjct: 85 L---RIDP-FTAAVVTIMINSGAYIAEITRGAVLSIHKGFREAGLALGLSRWETIRYVIL 140 Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376 P A+R ++PPL +Q++ +K++SL + +G A+L G II +A+EI YL Sbjct: 141 PLALRRMLPPLGNQWIISIKDTSLFIVIGVAELTRQGQEIIAGNFRALEIWSAVAVFYLI 200 Query: 377 LSIMIALFMNRLNAKIAL 394 ++++++ + RL ++ + Sbjct: 201 ITLVLSFILRRLERRMKI 218 >gi|315927549|gb|EFV06882.1| binding-protein-dependent transport system inner membrane component family protein [Campylobacter jejuni subsp. jejuni DFVF1099] Length = 143 Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 43/114 (37%), Positives = 77/114 (67%), Gaps = 10/114 (8%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +AL ++A+IAEIVRSG+ +V +GQMEAA A+GL ++ + + ++LPQA ++I+P L ++ Sbjct: 19 LALGLNSSAYIAEIVRSGINSVDKGQMEAARAMGLDYKTSMKEIILPQATKNILPALANE 78 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI-----EIILIWMFIYLSLSI 379 +++L K +S+ VGF ++ + T+ +Q+ QA+ II + Y+S+ I Sbjct: 79 FISLFKETSV---VGFISVIDI--TMQSQSLQAVLYNPKPIIFTGLVYYVSVKI 127 >gi|302186220|ref|ZP_07262893.1| amino acid ABC transporter permease [Pseudomonas syringae pv. syringae 642] Length = 220 Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 44/129 (34%), Positives = 74/129 (57%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + I L+ + + ++EIVR L A+PRGQ+EA A+GL ++ R VLLPQAMR I+P Sbjct: 91 FQAGAIGLTLFCGSHVSEIVRGALQAIPRGQLEAGKAIGLCFGQSLRYVLLPQAMRQILP 150 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 + ++K S+L +G A+L+ +I +T +E L F++ ++ I L Sbjct: 151 TWVNSSTEIVKASTLLSVIGVAELLLSTQQVIARTFMTLEFYLFAGFLFFLINYAIELLG 210 Query: 386 NRLNAKIAL 394 ++ ++AL Sbjct: 211 RQIEKRVAL 219 >gi|298491369|ref|YP_003721546.1| polar amino acid ABC transporter inner membrane subunit ['Nostoc azollae' 0708] gi|298233287|gb|ADI64423.1| polar amino acid ABC transporter, inner membrane subunit ['Nostoc azollae' 0708] Length = 340 Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 55/175 (31%), Positives = 93/175 (53%), Gaps = 27/175 (15%) Query: 191 VFSFVLGIVLSL------FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244 V SF +G++L+L F TR + + + LP++ I +F ++ + L +L Sbjct: 149 VLSFPIGVILALGRTSNLFLTRWFSILYIEIVRGLPIIGI----LFIAQVMLPLFLPTEL 204 Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304 D+ + G I G L ++AA++AE VR GL ++PRGQ EA+ ALG Sbjct: 205 RLDRLIRG----IAG-------------LVLFSAAYMAENVRGGLQSIPRGQTEASKALG 247 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359 L++LPQA+R++IP + Q+++L K++SL VG +L + +I+ Q Sbjct: 248 FNTPLVVILIILPQALRAVIPAIVGQFISLFKDTSLLSLVGLVELTGIARSILAQ 302 >gi|237806947|ref|YP_002891387.1| polar amino acid ABC transporter, inner membrane subunit [Tolumonas auensis DSM 9187] gi|237499208|gb|ACQ91801.1| polar amino acid ABC transporter, inner membrane subunit [Tolumonas auensis DSM 9187] Length = 262 Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 60/174 (34%), Positives = 93/174 (53%), Gaps = 15/174 (8%) Query: 220 PLLY-ISTF---LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSC 275 PL Y ISTF G P L+ + L YQ P +G T P S IAL+ Sbjct: 91 PLAYGISTFYTSFFRGTPLLLQVLLIYQ---GLPQIGPI-----PTAIP---SGIIALAL 139 Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335 A+++EI RS ++A+PRGQ EAA+ALGL + V+LPQ+M+ IPP + ++ +L Sbjct: 140 CYGAYLSEIFRSAIVAIPRGQWEAAMALGLKKHQTFLKVILPQSMKVAIPPGMAMFIAML 199 Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 K+SSL +G +++ + + + +E+++ IY LS ++ L RL Sbjct: 200 KDSSLVSVMGLWEIMFLAQSYGRSAYRYMEMLITAAVIYWILSFLLELIQARLE 253 >gi|324324461|gb|ADY19721.1| amino acid ABC transporter, permease protein [Bacillus thuringiensis serovar finitimus YBT-020] Length = 230 Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 49/126 (38%), Positives = 74/126 (58%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IAL+ + A+I EI R + +V RGQMEAA +LG+ + A R ++LPQA R +PPL +Q Sbjct: 89 IALAIHNGAYITEIFRGSIQSVDRGQMEAARSLGMPYSLAMRRIVLPQAFRQSLPPLGNQ 148 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++ LK+SSL VG ++L G +I Q +E +I YL L ++ +N L Sbjct: 149 FIIGLKDSSLVAYVGMSELWGSGLSIAAGNFQQLETYIIVGLYYLVLVLLFTYLVNLLEK 208 Query: 391 KIALKE 396 ++ KE Sbjct: 209 RLQRKE 214 >gi|257069824|ref|YP_003156079.1| amino acid ABC transporter membrane protein [Brachybacterium faecium DSM 4810] gi|256560642|gb|ACU86489.1| amino acid ABC transporter membrane protein [Brachybacterium faecium DSM 4810] Length = 322 Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 44/114 (38%), Positives = 71/114 (62%), Gaps = 1/114 (0%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + I L A++AEI+RSGL +V GQ EA+ ALG+++ K R +++PQAMR I+P Sbjct: 157 FWAAVIGLGLNEGAYLAEIIRSGLNSVDTGQTEASKALGMSNGKILRRIIVPQAMRVIVP 216 Query: 326 PLTSQYLNLLKNSSLAVAVGFA-DLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378 PL ++ + +LK +SL +AV F DL I N+ I ++++ YL+++ Sbjct: 217 PLGNETIGMLKTTSLVLAVPFTLDLTFATNGIANKLFTPIPLLIVAALWYLAIT 270 >gi|212712949|ref|ZP_03321077.1| hypothetical protein PROVALCAL_04047 [Providencia alcalifaciens DSM 30120] gi|212684427|gb|EEB43955.1| hypothetical protein PROVALCAL_04047 [Providencia alcalifaciens DSM 30120] Length = 121 Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 37/85 (43%), Positives = 58/85 (68%) Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340 + E VR+ + ++PRGQ AA+A+GLT + R VLLP A R I+PP+TS+ LNL+KNS++ Sbjct: 1 MTEQVRAAIQSLPRGQRNAALAMGLTLPQTYRYVLLPNAYRVILPPMTSEMLNLVKNSAI 60 Query: 341 AVAVGFADLVSVGGTIINQTGQAIE 365 A +G D+ + G +++ + A E Sbjct: 61 ASTIGLVDMAAQAGKLLDYSAHAWE 85 >gi|319939707|ref|ZP_08014065.1| amino acid-binding permease [Streptococcus anginosus 1_2_62CV] gi|319811125|gb|EFW07434.1| amino acid-binding permease [Streptococcus anginosus 1_2_62CV] Length = 521 Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 41/109 (37%), Positives = 66/109 (60%) Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 +S T A+++EIVR G+ AV +GQ EAA ALG+TH + R V+LPQ +R+I+P ++++ Sbjct: 383 VSINTGAYMSEIVRGGIFAVDKGQFEAATALGMTHNQTMRKVVLPQVVRNILPATGNEFV 442 Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 +K++S+ + +L G TI QT Q + I IY L+ + Sbjct: 443 INIKDTSVLNVISVVELYFSGNTIATQTYQYFQTFTIIAVIYFVLTFTV 491 >gi|306842007|ref|ZP_07474680.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Brucella sp. BO2] gi|306287848|gb|EFM59268.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Brucella sp. BO2] Length = 387 Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 35/82 (42%), Positives = 59/82 (71%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I ++ + +A++AE+VR GL A+PRGQ E A ALGL++ + T LV+LPQA++ +IP + + Sbjct: 255 IGVALFASAYMAEVVRGGLQAIPRGQYEGADALGLSYWQKTGLVVLPQALKLVIPGIVNT 314 Query: 331 YLNLLKNSSLAVAVGFADLVSV 352 ++ L K++SL +G DL+ + Sbjct: 315 FIGLFKDTSLVYIIGMFDLLGI 336 >gi|225627245|ref|ZP_03785282.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family protein [Brucella ceti str. Cudo] gi|225617250|gb|EEH14295.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family protein [Brucella ceti str. Cudo] Length = 387 Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 35/82 (42%), Positives = 59/82 (71%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I ++ + +A++AE+VR GL A+PRGQ E A ALGL++ + T LV+LPQA++ +IP + + Sbjct: 255 IGVALFASAYMAEVVRGGLQAIPRGQYEGADALGLSYWQKTGLVVLPQALKLVIPGIVNT 314 Query: 331 YLNLLKNSSLAVAVGFADLVSV 352 ++ L K++SL +G DL+ + Sbjct: 315 FIGLFKDTSLVYIIGMFDLLGI 336 >gi|124026132|ref|YP_001015248.1| amino acid ABC transporter permease [Prochlorococcus marinus str. NATL1A] gi|123961200|gb|ABM75983.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Prochlorococcus marinus str. NATL1A] Length = 344 Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 40/130 (30%), Positives = 76/130 (58%), Gaps = 3/130 (2%) Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 A + + +A+IAE +R GL ++P Q+EAA +LGL + + +L+PQA+R +P LT+Q Sbjct: 214 AFTLFVSAYIAEDIRGGLQSIPNTQIEAANSLGLNQYQIIQFILIPQALRIALPALTNQS 273 Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQ---TGQAIEIILIWMFIYLSLSIMIALFMNRL 388 + L +N+SL +G +L+ +G +I+ GQ IE+ + +Y + ++A+ L Sbjct: 274 IGLFQNTSLMAILGLVELLGIGRSILANPEFIGQYIEVYVWLACVYWIVCTIMAVLARHL 333 Query: 389 NAKIALKEKK 398 ++ + + Sbjct: 334 EQRMTINQAN 343 >gi|254243964|ref|ZP_04937286.1| hypothetical protein PA2G_04794 [Pseudomonas aeruginosa 2192] gi|126197342|gb|EAZ61405.1| hypothetical protein PA2G_04794 [Pseudomonas aeruginosa 2192] Length = 230 Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 59/190 (31%), Positives = 104/190 (54%), Gaps = 15/190 (7%) Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFN 255 L + L L R SRH++ + A+P YI F G P L+ QL L QF Sbjct: 33 LALALPLGIARASRHWYVR---AVPYAYI--FFFRGTPLLL------QLFIVYYGLAQFE 81 Query: 256 FIGGSTVSPEFMSLY----IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311 + S P Y + ++ +TAA+IAEI+R + +VP G++EAA ALG++ R+A Sbjct: 82 EVRKSAFWPYLRDPYWCALLTMTLHTAAYIAEILRGAIHSVPVGEVEAARALGMSRRQAL 141 Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371 ++LP+A+R +P +++ + +LK S++ V D++ + TII +T +++ + Sbjct: 142 WHIILPRAVRIGLPAYSNEVIVMLKASAVVYTVTLFDIMGMARTIIARTYESMLFFCLAG 201 Query: 372 FIYLSLSIMI 381 +YL ++I++ Sbjct: 202 ALYLVITIVL 211 >gi|224371143|ref|YP_002605307.1| ABC-type amino acid transport system, permease protein [Desulfobacterium autotrophicum HRM2] gi|223693860|gb|ACN17143.1| ABC-type amino acid transport system, permease protein [Desulfobacterium autotrophicum HRM2] Length = 293 Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 42/140 (30%), Positives = 80/140 (57%), Gaps = 2/140 (1%) Query: 237 LIALKYQLHFDKPVLGQF--NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294 L L ++ ++ +L QF F+ ++ P F S +L+ Y A+ EI+R+G+ ++ + Sbjct: 132 LTGLDRAVNMNEGLLRQFLTTFVSDPSLLPVFFSATASLALYEGAYFTEIIRAGIESIEK 191 Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354 GQ EA+ +LG T + R V+LPQA+R ++PP+ Q ++ +K+SS+ + +L G Sbjct: 192 GQWEASSSLGFTRFQQLRHVILPQALRRMLPPMAGQIISTIKDSSIVSVISIQELTFQGM 251 Query: 355 TIINQTGQAIEIILIWMFIY 374 +++ T E+ L + +Y Sbjct: 252 ELMSATFLTFEVWLTILALY 271 Score = 40.4 bits (93), Expect = 0.54, Method: Compositional matrix adjust. Identities = 22/61 (36%), Positives = 33/61 (54%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 IL G T ++F + A +IGT++GA + + + + YVE RNIP +V IF Sbjct: 62 ILTGLFITLRISFWATLSALVIGTIMGAMKSGRSHYLKMVATAYVETIRNIPVIVWIFIF 121 Query: 149 Y 149 Y Sbjct: 122 Y 122 >gi|116248748|ref|YP_764589.1| putative permease component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] gi|115253398|emb|CAK11786.1| putative permease component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] Length = 229 Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 50/178 (28%), Positives = 92/178 (51%), Gaps = 24/178 (13%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 + LP+L + F+ F LP + L DK S + LS Y Sbjct: 74 RNLPILVLVLFVFFALP-------QMGLRLDK-----------------IKSFVLVLSLY 109 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 + A++AE+ R+GL+++PRG EA +A+GLT + ++ P +R+++P L+S ++L K Sbjct: 110 SGAYLAEVFRAGLLSIPRGLTEAGLAIGLTGMQIRSSIIAPLMLRNVLPSLSSTIISLFK 169 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394 ++SLA A+ +L I ++ + IE ++ +Y++ +IA M + ++AL Sbjct: 170 DTSLAAAIAVPELTFAARKINVESFRVIETWMVTSALYVATCFLIAAVMRFVERRLAL 227 >gi|326793192|ref|YP_004311013.1| polar amino acid ABC transporter inner membrane protein [Clostridium lentocellum DSM 5427] gi|326543956|gb|ADZ85815.1| polar amino acid ABC transporter, inner membrane subunit [Clostridium lentocellum DSM 5427] Length = 224 Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 36/106 (33%), Positives = 66/106 (62%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P + +A S AA+ AEI R+G+ ++ +GQ E A LGL+ + ++LPQA + + Sbjct: 93 PRMPAALLAFSLNYAAYFAEIFRAGISSIDQGQYEGAEVLGLSKQDTFFRIILPQAFKRV 152 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369 +PP+ ++ + L+K+++L AVGF DL+ +G T N+ + ++L+ Sbjct: 153 LPPIANEVITLVKDTALVYAVGFDDLLKIGKTATNRDASLLPLVLV 198 >gi|256369177|ref|YP_003106685.1| amino acid ABC transporter, permease protein [Brucella microti CCM 4915] gi|255999337|gb|ACU47736.1| amino acid ABC transporter, permease protein [Brucella microti CCM 4915] Length = 385 Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 35/82 (42%), Positives = 59/82 (71%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I ++ + +A++AE+VR GL A+PRGQ E A ALGL++ + T LV+LPQA++ +IP + + Sbjct: 253 IGVALFASAYMAEVVRGGLQAIPRGQYEGADALGLSYWQKTGLVVLPQALKLVIPGIVNT 312 Query: 331 YLNLLKNSSLAVAVGFADLVSV 352 ++ L K++SL +G DL+ + Sbjct: 313 FIGLFKDTSLVYIIGMFDLLGI 334 >gi|225175910|ref|ZP_03729902.1| polar amino acid ABC transporter, inner membrane subunit [Dethiobacter alkaliphilus AHT 1] gi|225168498|gb|EEG77300.1| polar amino acid ABC transporter, inner membrane subunit [Dethiobacter alkaliphilus AHT 1] Length = 225 Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 41/128 (32%), Positives = 79/128 (61%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IAL + AA++AEI R + ++ RGQ EAA++LG+T +A + ++LPQA + +PPL +Q Sbjct: 97 IALGIHNAAYLAEIFRGAIQSIDRGQREAAMSLGMTSWQAMKRIILPQAFKRAVPPLGNQ 156 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++ LK+SSLA + +L+S + +E+++I YL ++ ++ + +N + Sbjct: 157 FIIALKDSSLASVIAVPELLSRARQFGSSNFLYMEMLVIAGIYYLIMTSVLTVVVNHVEE 216 Query: 391 KIALKEKK 398 ++ + E + Sbjct: 217 RLRVSEYR 224 >gi|260655293|ref|ZP_05860781.1| amino acid ABC transporter, permease/substrate-binding protein [Jonquetella anthropi E3_33 E1] gi|260629741|gb|EEX47935.1| amino acid ABC transporter, permease/substrate-binding protein [Jonquetella anthropi E3_33 E1] Length = 217 Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 67/239 (28%), Positives = 117/239 (48%), Gaps = 29/239 (12%) Query: 160 DHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKAL 219 D S++LP+ N L K +F ++G LF R + L Sbjct: 4 DFSVLLPYWHLFLNGAL--------VTVKASLFGVLIGTAGGLFVGAF-RVLPFAPLRWL 54 Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279 LYIS ++ G P +V + L Y F P LG N F++ + + ++A Sbjct: 55 AWLYIS--VLRGTPLMVQLFLIY---FGLPELG-VNL-------DAFLAGVLGIGINSSA 101 Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339 ++ EIVR G+ ++PRGQ EAA LGL++ ++ +++PQA+RS++P + ++++ L+K SS Sbjct: 102 YVGEIVRGGIESIPRGQWEAAKVLGLSYWQSLWTIIMPQAVRSMLPAIGNEFVALIKESS 161 Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 L + +DL G + + T + E ++ +YL L+ + ++L EKK Sbjct: 162 LLSVLAISDLTQAGQQVRSVTYASFESFIVVGLVYLFLT-------SAATGALSLLEKK 213 >gi|49476791|ref|YP_034685.1| amino acid ABC transporter permease [Bacillus thuringiensis serovar konkukian str. 97-27] gi|218901559|ref|YP_002449393.1| glutamine ABC transporter, permease/substrate-binding protein [Bacillus cereus AH820] gi|228913104|ref|ZP_04076743.1| Amino acid ABC transproter, permease [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|49328347|gb|AAT58993.1| amino acid ABC transporter, permease [Bacillus thuringiensis serovar konkukian str. 97-27] gi|218536304|gb|ACK88702.1| glutamine ABC transporter, permease/substrate-binding protein [Bacillus cereus AH820] gi|228846509|gb|EEM91522.1| Amino acid ABC transproter, permease [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] Length = 230 Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 49/126 (38%), Positives = 74/126 (58%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IAL+ + A+I EI R + +V RGQMEAA +LG+ + A R ++LPQA R IPPL +Q Sbjct: 89 IALAIHNGAYITEIFRGSIQSVDRGQMEAARSLGMPYSLAMRRIVLPQAFRQSIPPLGNQ 148 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++ LK+SSL VG ++L G +I Q ++ +I YL L ++ +N L Sbjct: 149 FIIGLKDSSLVAYVGLSELWGSGLSIAAGNFQQLDTYIIVGLYYLVLVLLFTYLVNLLEK 208 Query: 391 KIALKE 396 ++ KE Sbjct: 209 RLQRKE 214 >gi|254701521|ref|ZP_05163349.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Brucella suis bv. 5 str. 513] gi|254709862|ref|ZP_05171673.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Brucella pinnipedialis B2/94] gi|256031354|ref|ZP_05444968.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Brucella pinnipedialis M292/94/1] gi|256060864|ref|ZP_05451024.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Brucella neotomae 5K33] gi|256159476|ref|ZP_05457244.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Brucella ceti M490/95/1] gi|256254762|ref|ZP_05460298.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Brucella ceti B1/94] gi|260168488|ref|ZP_05755299.1| amino acid ABC transporter, permease protein [Brucella sp. F5/99] gi|261221941|ref|ZP_05936222.1| polar amino acid ABC transporter [Brucella ceti B1/94] gi|261317403|ref|ZP_05956600.1| polar amino acid ABC transporter [Brucella pinnipedialis B2/94] gi|261324861|ref|ZP_05964058.1| polar amino acid ABC transporter [Brucella neotomae 5K33] gi|261752069|ref|ZP_05995778.1| polar amino acid ABC transporter [Brucella suis bv. 5 str. 513] gi|261757956|ref|ZP_06001665.1| polar amino acid ABC transporter [Brucella sp. F5/99] gi|265988440|ref|ZP_06100997.1| polar amino acid ABC transporter [Brucella pinnipedialis M292/94/1] gi|265997904|ref|ZP_06110461.1| polar amino acid ABC transporter [Brucella ceti M490/95/1] gi|294852108|ref|ZP_06792781.1| general L-amino acid transport system permease [Brucella sp. NVSL 07-0026] gi|260920525|gb|EEX87178.1| polar amino acid ABC transporter [Brucella ceti B1/94] gi|261296626|gb|EEY00123.1| polar amino acid ABC transporter [Brucella pinnipedialis B2/94] gi|261300841|gb|EEY04338.1| polar amino acid ABC transporter [Brucella neotomae 5K33] gi|261737940|gb|EEY25936.1| polar amino acid ABC transporter [Brucella sp. F5/99] gi|261741822|gb|EEY29748.1| polar amino acid ABC transporter [Brucella suis bv. 5 str. 513] gi|262552372|gb|EEZ08362.1| polar amino acid ABC transporter [Brucella ceti M490/95/1] gi|264660637|gb|EEZ30898.1| polar amino acid ABC transporter [Brucella pinnipedialis M292/94/1] gi|294820697|gb|EFG37696.1| general L-amino acid transport system permease [Brucella sp. NVSL 07-0026] Length = 385 Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 35/82 (42%), Positives = 59/82 (71%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I ++ + +A++AE+VR GL A+PRGQ E A ALGL++ + T LV+LPQA++ +IP + + Sbjct: 253 IGVALFASAYMAEVVRGGLQAIPRGQYEGADALGLSYWQKTGLVVLPQALKLVIPGIVNT 312 Query: 331 YLNLLKNSSLAVAVGFADLVSV 352 ++ L K++SL +G DL+ + Sbjct: 313 FIGLFKDTSLVYIIGMFDLLGI 334 >gi|242237844|ref|YP_002986025.1| polar amino acid ABC transporter inner membrane subunit [Dickeya dadantii Ech703] gi|242129901|gb|ACS84203.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya dadantii Ech703] Length = 326 Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 38/104 (36%), Positives = 69/104 (66%) Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 L+ AA++AEI+R+GL++V +GQ+E A G++ +A R +++PQAMR+IIPP +Q Sbjct: 168 GLALNEAAYMAEIIRAGLLSVDQGQIETTQAFGMSRVRALRRIIIPQAMRAIIPPTGNQL 227 Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375 ++++K +SL + DL+ I N+T + I ++++ + YL Sbjct: 228 ISMIKATSLVSVIAMGDLLYSVQAIYNRTFEIIPMLMVAVIWYL 271 >gi|90578868|ref|ZP_01234678.1| Putative arginine ABC transporter, permease protein [Vibrio angustum S14] gi|90439701|gb|EAS64882.1| Putative arginine ABC transporter, permease protein [Vibrio angustum S14] Length = 220 Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 45/135 (33%), Positives = 81/135 (60%), Gaps = 1/135 (0%) Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321 +SP F+S IALS A++ A+ +R + AVP+GQ EAA ALG++ + +++PQA+R Sbjct: 72 ISP-FLSGVIALSLIFASYAAQTIRGAIKAVPKGQREAASALGISKARTFVAIIIPQAIR 130 Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 +P LT+Q+L LLK+++L +G DL+ T ++ +YL ++++ Sbjct: 131 HALPGLTNQWLVLLKDTALVSLIGVTDLLKQAQLSSAATHESFTWYATAAAVYLVITLIT 190 Query: 382 ALFMNRLNAKIALKE 396 + R++AK +++E Sbjct: 191 QQIIKRIDAKYSVQE 205 >gi|82543614|ref|YP_407561.1| transport system permease protein [Shigella boydii Sb227] gi|81245025|gb|ABB65733.1| putative transport system permease protein [Shigella boydii Sb227] gi|320184747|gb|EFW59539.1| Cystine ABC transporter, permease protein [Shigella flexneri CDC 796-83] gi|332096720|gb|EGJ01711.1| L-cystine transport system permease protein tcyB [Shigella boydii 3594-74] Length = 222 Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 62/207 (29%), Positives = 110/207 (53%), Gaps = 18/207 (8%) Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251 F +LG +L+L RLS + + L YIS F G P LIA + +++ P Sbjct: 32 FGLLLGFILALM--RLSPIWPVRW---LARFYISIFR--GTP---LIAQLFMIYYGLP-- 79 Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311 QF G + P +S I LS TAA+ AE +R+ + ++ +GQ EAA ++G+T + Sbjct: 80 -QF----GIELDP-ILSAMIGLSLNTAAYAAETLRAAISSIDKGQWEAAASIGMTPWQTM 133 Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371 R +LPQA R +PPL++ +++L+K++SLA + +L I ++T + + L Sbjct: 134 RRAILPQAARVALPPLSNSFISLVKDTSLAATIQVPELFRQAQLITSRTLEVFTMYLAAS 193 Query: 372 FIYLSLSIMIALFMNRLNAKIALKEKK 398 IY ++ +++ N ++ +E++ Sbjct: 194 LIYWIMATVLSTLQNHFENQLNRQERE 220 >gi|72382451|ref|YP_291806.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Prochlorococcus marinus str. NATL2A] gi|72002301|gb|AAZ58103.1| amino acid ABC transporter membrane protein 2, PAAT family [Prochlorococcus marinus str. NATL2A] Length = 344 Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 40/130 (30%), Positives = 76/130 (58%), Gaps = 3/130 (2%) Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 A + + +A+IAE +R GL ++P Q+EAA +LGL + + +L+PQA+R +P LT+Q Sbjct: 214 AFTLFVSAYIAEDIRGGLQSIPNTQIEAANSLGLNQYQIIQFILIPQALRIALPALTNQS 273 Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQ---TGQAIEIILIWMFIYLSLSIMIALFMNRL 388 + L +N+SL +G +L+ +G +I+ GQ IE+ + +Y + ++A+ L Sbjct: 274 IGLFQNTSLMAILGLVELLGIGRSILANPEFIGQYIEVYVWLACVYWIVCTIMAVLARHL 333 Query: 389 NAKIALKEKK 398 ++ + + Sbjct: 334 EQRMTINQAN 343 >gi|312958351|ref|ZP_07772872.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Pseudomonas fluorescens WH6] gi|311287415|gb|EFQ65975.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Pseudomonas fluorescens WH6] Length = 221 Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 40/122 (32%), Positives = 72/122 (59%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I S AA+ EI+R+ + ++ RGQ EAA ++G+T + R +LPQAMR+ +PPL + Sbjct: 93 IGFSLNMAAYACEILRAAIASIERGQWEAAASIGMTRAQTLRRAILPQAMRTALPPLGNS 152 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 +++L+K+++LA + +L + +T + + L IY L+ ++A F NRL Sbjct: 153 FISLVKDTALAATIQVPELFRQAQLVSARTFEIFTMYLSAALIYWVLASILAYFQNRLED 212 Query: 391 KI 392 ++ Sbjct: 213 RV 214 >gi|253687971|ref|YP_003017161.1| polar amino acid ABC transporter, inner membrane subunit [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251754549|gb|ACT12625.1| polar amino acid ABC transporter, inner membrane subunit [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 219 Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 41/129 (31%), Positives = 77/129 (59%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + + + + A+IAEI R ++++ G EA +ALGL+ R R V+ P A+R ++P Sbjct: 90 FAAAVVTIMINSGAYIAEITRGSVLSIHNGFREAGLALGLSRRATLRHVIAPLALRRMLP 149 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PL +Q++ +K++SL + +G A+L G II +A+EI IYL ++++++ + Sbjct: 150 PLGNQWIISIKDTSLFIVIGVAELTRSGQEIIAGNFRALEIWTAVAIIYLCITLILSFIL 209 Query: 386 NRLNAKIAL 394 RL ++ + Sbjct: 210 RRLERRLKI 218 >gi|227903012|ref|ZP_04020817.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus acidophilus ATCC 4796] gi|227869255|gb|EEJ76676.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus acidophilus ATCC 4796] Length = 562 Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 41/116 (35%), Positives = 73/116 (62%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I +S T A++AE++R G+I+ P GQ EAA ALG+TH + ++LPQA+++ +P +T++ Sbjct: 416 IIVSINTGAYLAEVIRGGIISTPEGQFEAASALGMTHNQRMWHIILPQAIKNCLPSITNE 475 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386 ++ +K++S+ + ++L VG TI +Q+ + L+ IYL L+ I N Sbjct: 476 FIVNIKDTSVLSIISVSELFFVGTTIASQSFKFFPTYLMISAIYLILTFTITRIFN 531 Score = 37.7 bits (86), Expect = 3.5, Method: Compositional matrix adjust. Identities = 30/93 (32%), Positives = 38/93 (40%), Gaps = 10/93 (10%) Query: 67 RAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVG----------A 116 +AG E T+ Y I+ G T LA G I IG LVG Sbjct: 305 KAGNETKNENWLVTTWKQYGGMIMSGIGMTLLLALVGTIVGFFIGLLVGIVRTIPTPTTR 364 Query: 117 GRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 G+ A V W+ VYVE+FR P +V +Y Sbjct: 365 GKRWALNFVKWLLSVYVEIFRGTPMMVQAAVIY 397 >gi|172064905|ref|YP_001815617.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria MC40-6] gi|171997147|gb|ACB68064.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria MC40-6] Length = 248 Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 49/147 (33%), Positives = 82/147 (55%), Gaps = 4/147 (2%) Query: 251 LGQFNFIGGSTVSPEFMSLYI----ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306 LGQF I S V P Y+ +L+ TA + AEI+R GL+AVP GQ+EA ++GL+ Sbjct: 78 LGQFGVIRESFVWPLLREPYVCAVLSLALCTAGYTAEILRGGLMAVPVGQIEAGYSIGLS 137 Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 R V+ P A+R +P +++ + L+K+++LA V ++ V II QT + E+ Sbjct: 138 GFALLRRVIGPIALRQCLPAYSTEAVLLVKSTALASLVTVWEVTGVAQQIIQQTYRTTEV 197 Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIA 393 + IYL L+ ++ + L +++ Sbjct: 198 FVCAALIYLGLNFIVVRLLGALEWRLS 224 >gi|269139653|ref|YP_003296354.1| glutamine ABC transporter permease component [Edwardsiella tarda EIB202] gi|267985314|gb|ACY85143.1| glutamine ABC transporter permease component [Edwardsiella tarda EIB202] gi|304559523|gb|ADM42187.1| Glutamine transport system permease protein GlnP [Edwardsiella tarda FL6-60] Length = 218 Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 55/187 (29%), Positives = 99/187 (52%), Gaps = 12/187 (6%) Query: 208 SRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFM 267 +R F + L++I LI G P +V + Y F P++ + P F Sbjct: 43 ARAFGGWLSNHIALVFIE--LIRGTPIVVQVMFIY---FALPMMMPLR------IDP-FS 90 Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327 + I + + A+IAEI R ++++ G EA +ALGL+ R R V++P A+R ++PPL Sbjct: 91 AAVITIMINSGAYIAEITRGAVLSIHSGFREAGLALGLSRRDTLRYVIMPLALRRMLPPL 150 Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387 +Q++ +K++SL + +G A+L G II +A+EI IYL +++ ++ + R Sbjct: 151 GNQWIVSIKDTSLFIVIGVAELTRQGQEIIAGNFRAMEIWSAVAVIYLIMTLALSFVLRR 210 Query: 388 LNAKIAL 394 L ++ + Sbjct: 211 LEKRLKI 217 >gi|187929543|ref|YP_001900030.1| polar amino acid ABC transporter inner membrane subunit [Ralstonia pickettii 12J] gi|241663662|ref|YP_002982022.1| polar amino acid ABC transporter inner membrane subunit [Ralstonia pickettii 12D] gi|309781682|ref|ZP_07676415.1| glutamine ABC transporter, permease protein [Ralstonia sp. 5_7_47FAA] gi|187726433|gb|ACD27598.1| polar amino acid ABC transporter, inner membrane subunit [Ralstonia pickettii 12J] gi|240865689|gb|ACS63350.1| polar amino acid ABC transporter, inner membrane subunit [Ralstonia pickettii 12D] gi|308919323|gb|EFP64987.1| glutamine ABC transporter, permease protein [Ralstonia sp. 5_7_47FAA] Length = 230 Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 37/92 (40%), Positives = 64/92 (69%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 +F ++ AL + A++AEIVR+G+ +PRGQME+A +LGL++ +A R V+LPQA+R+++ Sbjct: 94 QFSTMLTALVIFDGAYLAEIVRAGIQGLPRGQMESARSLGLSYMQAMRRVILPQALRNML 153 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356 P L +Q ++ +K +SL + ++ V G I Sbjct: 154 PSLVNQLVSTIKETSLGYIISLPEVSFVAGQI 185 >gi|75906961|ref|YP_321257.1| amino acid ABC transporter permease [Anabaena variabilis ATCC 29413] gi|75700686|gb|ABA20362.1| neutral amino acid ABC transporter membrane protein / L-glutamate ABC transporter membrane protein / L-aspartate ABC transporter membrane protein [Anabaena variabilis ATCC 29413] Length = 381 Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 45/111 (40%), Positives = 67/111 (60%), Gaps = 8/111 (7%) Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 L ++AA++AE VR GL AV RGQ+EAA ALGL L++LPQA+R++IP + Q+ Sbjct: 256 GLVLFSAAYMAENVRGGLQAVSRGQVEAAKALGLNTFFVVLLIVLPQALRAVIPAVVGQF 315 Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQ---TGQAIEIILI-----WMFIY 374 + L K++SL VG +L + +I+ Q G+ E+ L W+F Y Sbjct: 316 IGLFKDTSLLSLVGLVELTGIARSILAQPQFIGRYAEVYLFIGLIYWLFCY 366 >gi|330830031|ref|YP_004392983.1| amino acid ABC transporter permease [Aeromonas veronii B565] gi|328805167|gb|AEB50366.1| ABC-type amino acid transporter, permease protein [Aeromonas veronii B565] Length = 265 Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 38/90 (42%), Positives = 62/90 (68%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 ++LS Y AF AE++R+G+ A+P+GQ EAA +LGL+ R V+LPQ +R +PPLT++ Sbjct: 137 LSLSLYQGAFTAEVLRAGVQAIPKGQWEAAQSLGLSRAITLRKVILPQLVRITLPPLTNE 196 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 ++L+K+S+L + DL + G T++ T Sbjct: 197 LVSLIKHSALVSVIAIFDLTNEGRTLVADT 226 >gi|259046648|ref|ZP_05737049.1| polar amino acid uptake (PAAT) family ABC superfamily ATP binding cassette transporter, permease protein [Granulicatella adiacens ATCC 49175] gi|259036813|gb|EEW38068.1| polar amino acid uptake (PAAT) family ABC superfamily ATP binding cassette transporter, permease protein [Granulicatella adiacens ATCC 49175] Length = 219 Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 64/193 (33%), Positives = 99/193 (51%), Gaps = 28/193 (14%) Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF---LIFGLPTLVLIALKYQLHF 246 FVF +LG +L L R SR L +I+TF + G PTLV + L L+F Sbjct: 33 FVFGTILGFILVL--MRRSRFRF--------LRWIATFHVSFMRGTPTLVFLFL---LYF 79 Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306 P L P + + S ++A+I+E++RS + AV GQ EAA++LG++ Sbjct: 80 GLPFL--------KITLPALVCALLCFSIASSAYISEVLRSAMDAVDNGQWEAAMSLGMS 131 Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS----VGGTIINQTGQ 362 +R+ + V++PQA R IPPL++ L+++K SSL + D+ VGG N Sbjct: 132 YRQTLQKVIVPQAFRIAIPPLSNVLLDMIKGSSLVAMISLPDIFQNAKIVGGREQNYMTV 191 Query: 363 AIEIILIWMFIYL 375 I + +I+ I L Sbjct: 192 YILVAIIYWIICL 204 >gi|254718863|ref|ZP_05180674.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Brucella sp. 83/13] gi|265983848|ref|ZP_06096583.1| polar amino acid ABC transporter [Brucella sp. 83/13] gi|306837634|ref|ZP_07470504.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Brucella sp. NF 2653] gi|264662440|gb|EEZ32701.1| polar amino acid ABC transporter [Brucella sp. 83/13] gi|306407283|gb|EFM63492.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Brucella sp. NF 2653] Length = 385 Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 35/82 (42%), Positives = 59/82 (71%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I ++ + +A++AE+VR GL A+PRGQ E A ALGL++ + T LV+LPQA++ +IP + + Sbjct: 253 IGVALFASAYMAEVVRGGLQAIPRGQYEGADALGLSYWQKTGLVVLPQALKLVIPGIVNT 312 Query: 331 YLNLLKNSSLAVAVGFADLVSV 352 ++ L K++SL +G DL+ + Sbjct: 313 FIGLFKDTSLVYIIGMFDLLGI 334 >gi|296129396|ref|YP_003636646.1| polar amino acid ABC transporter, inner membrane subunit [Cellulomonas flavigena DSM 20109] gi|296021211|gb|ADG74447.1| polar amino acid ABC transporter, inner membrane subunit [Cellulomonas flavigena DSM 20109] Length = 218 Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 47/124 (37%), Positives = 74/124 (59%), Gaps = 1/124 (0%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + L+ YT+AF+AE VRSG+ AV GQ EAA A+GLT ++ V+LPQA+R++IPPL + Sbjct: 92 VCLTAYTSAFVAEAVRSGINAVGVGQAEAARAIGLTFGQSLTTVILPQAVRTVIPPLINV 151 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQT-GQAIEIILIWMFIYLSLSIMIALFMNRLN 389 + L KN+S+A +LV+ G + Q + +++ YL +++ N L Sbjct: 152 IIALTKNTSVAAGFAVVELVASGRRLAQQNPADVVLVLVGVALFYLVVTVPAGQLANLLE 211 Query: 390 AKIA 393 K+A Sbjct: 212 RKVA 215 >gi|226306802|ref|YP_002766762.1| amino acid ABC transporter permease protein [Rhodococcus erythropolis PR4] gi|226185919|dbj|BAH34023.1| putative amino acid ABC transporter permease protein [Rhodococcus erythropolis PR4] Length = 316 Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 41/99 (41%), Positives = 63/99 (63%) Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308 P + QF I + F+ I L+ AA++AEIVR+G+ +V GQ EA++ALG+T Sbjct: 134 PFVHQFAHINLQDLQAAFLFAVIGLALNEAAYMAEIVRAGVSSVNEGQTEASVALGMTWS 193 Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347 + R +LPQAMR IIPP ++ +++LK +SL AV ++ Sbjct: 194 QTMRRTVLPQAMRVIIPPTGNEVISMLKTTSLVTAVPYS 232 >gi|311068998|ref|YP_003973921.1| high affinity arginine ABC transporter permease [Bacillus atrophaeus 1942] gi|310869515|gb|ADP32990.1| high affinity arginine ABC transporter permease [Bacillus atrophaeus 1942] Length = 219 Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 51/166 (30%), Positives = 85/166 (51%), Gaps = 29/166 (17%) Query: 191 VFSFVLGIVLSLFATRLSR------HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244 V +LGIVLSL R F+ + PL+ + FGLP L L +Q+ Sbjct: 31 VIGLILGIVLSLCKISTFRPLIWIADFYTSVFRGTPLVLQLMIVYFGLPQL----LGFQI 86 Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304 +F + ALS +AA+++EI+R+G+ A+ +GQ EAA+ALG Sbjct: 87 D-------------------QFWAAVAALSLNSAAYVSEIIRAGINAIDKGQKEAAVALG 127 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 + + K + +LLPQA ++I P + ++ + L K S++ +G D++ Sbjct: 128 VPYSKMMKDLLLPQAFKNISPAIVNELITLTKESAIVTVIGLGDIM 173 >gi|229028210|ref|ZP_04184350.1| Amino acid ABC transproter, permease [Bacillus cereus AH1271] gi|228733084|gb|EEL83926.1| Amino acid ABC transproter, permease [Bacillus cereus AH1271] Length = 230 Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 72/224 (32%), Positives = 117/224 (52%), Gaps = 21/224 (9%) Query: 177 SFPTLTMDT--NAKIFVFSFVLGIVLSLFAT--RLSRHFHEKTGKALPLLYISTFLIFGL 232 ++PTL T ++ + S VLG ++ L R+S + K ++ +YI+ +I G Sbjct: 8 TYPTLLKATIVTLQLTLTSLVLGSLIGLLFAFFRISSN---KILNSIAHVYIA--IIRGT 62 Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292 P +V IA+ Y F +P F + IAL+ + A+I EI R + +V Sbjct: 63 PLIVQIAILY-----------FGITSVVVFTP-FWAGAIALAIHNGAYITEIFRGSIQSV 110 Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352 RGQ+EAA +LG+ + A R ++LPQA R +PPL +Q++ LK+SSL VG ++L Sbjct: 111 DRGQLEAARSLGMPYPLAMRRIILPQAFRQSLPPLGNQFIIGLKDSSLVAYVGLSELWGS 170 Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 G +I Q ++ +I YL L ++ F+N L ++ KE Sbjct: 171 GLSIAAGNFQQLDTYIIVGLYYLVLVLLFTYFVNLLEKRLQRKE 214 Score = 37.4 bits (85), Expect = 4.0, Method: Compositional matrix adjust. Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 1/74 (1%) Query: 83 SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142 S+Y T +L + T L + ++ ++IG L R+S+NK++ I VY+ + R P + Sbjct: 7 STYPT-LLKATIVTLQLTLTSLVLGSLIGLLFAFFRISSNKILNSIAHVYIAIIRGTPLI 65 Query: 143 VVIFFLYKSVLSVL 156 V I LY + SV+ Sbjct: 66 VQIAILYFGITSVV 79 >gi|23501631|ref|NP_697758.1| amino acid ABC transporter permease [Brucella suis 1330] gi|161618714|ref|YP_001592601.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Brucella canis ATCC 23365] gi|254704070|ref|ZP_05165898.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Brucella suis bv. 3 str. 686] gi|260566682|ref|ZP_05837152.1| polar amino acid ABC transporter [Brucella suis bv. 4 str. 40] gi|261754728|ref|ZP_05998437.1| polar amino acid ABC transporter [Brucella suis bv. 3 str. 686] gi|23347548|gb|AAN29673.1| amino acid ABC transporter, permease protein [Brucella suis 1330] gi|161335525|gb|ABX61830.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Brucella canis ATCC 23365] gi|260156200|gb|EEW91280.1| polar amino acid ABC transporter [Brucella suis bv. 4 str. 40] gi|261744481|gb|EEY32407.1| polar amino acid ABC transporter [Brucella suis bv. 3 str. 686] Length = 385 Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 35/82 (42%), Positives = 59/82 (71%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I ++ + +A++AE+VR GL A+PRGQ E A ALGL++ + T LV+LPQA++ +IP + + Sbjct: 253 IGVALFASAYMAEVVRGGLQAIPRGQYEGADALGLSYWQKTGLVVLPQALKLVIPGIVNT 312 Query: 331 YLNLLKNSSLAVAVGFADLVSV 352 ++ L K++SL +G DL+ + Sbjct: 313 FIGLFKDTSLVYIIGMFDLLGI 334 >gi|90424050|ref|YP_532420.1| amino acid ABC transporter permease [Rhodopseudomonas palustris BisB18] gi|90106064|gb|ABD88101.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Rhodopseudomonas palustris BisB18] Length = 499 Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 39/96 (40%), Positives = 62/96 (64%) Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315 F+ G+ + + I ++ + A+ AE++R GL A+PRGQ EAA ALGL++ K T LV+ Sbjct: 352 FLPGNFTVDGLVRVLIGIALFAGAYNAEVIRGGLQAIPRGQAEAASALGLSYWKITGLVV 411 Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 +PQA+R +IP L + ++ L K++SL V DL+ Sbjct: 412 MPQALRHVIPGLVNSFIALFKDTSLVSIVALFDLLG 447 >gi|296877228|ref|ZP_06901268.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus parasanguinis ATCC 15912] gi|296431748|gb|EFH17555.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus parasanguinis ATCC 15912] Length = 228 Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 61/209 (29%), Positives = 108/209 (51%), Gaps = 15/209 (7%) Query: 195 VLGIVLSLFAT---RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL------H 245 V+ I+LS F L + + K ++ ++Y++ I P ++LI Y L Sbjct: 25 VVSILLSFFPALFLALGQIYKVKGVRSFSVIYLA--FIRATPPILLILFFYSLFPSLLNS 82 Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305 F K + FN ++P + + +I S T +AEI+RS ++ V +GQ+EAA A+GL Sbjct: 83 FFKSIGSHFNVF---EINPIYYA-FIIFSLMTTGSLAEILRSAILTVDKGQLEAAQAIGL 138 Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365 T+R+A ++ PQA+RS +P L + +NL+K +SL + D+ ++ + Q E Sbjct: 139 TNRQAYIRIVFPQALRSALPNLCNLVINLVKGTSLVFVMTIKDITAIAKVEASYGYQYFE 198 Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIAL 394 L+ +Y+ + +I NRL ++ L Sbjct: 199 SYLVIFILYIVICGVIQWGFNRLEKRLTL 227 >gi|283954462|ref|ZP_06371982.1| amino acid ABC tansporter, permease protein, His/Glu/Gln/Arg/opine family [Campylobacter jejuni subsp. jejuni 414] gi|283794079|gb|EFC32828.1| amino acid ABC tansporter, permease protein, His/Glu/Gln/Arg/opine family [Campylobacter jejuni subsp. jejuni 414] Length = 247 Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 39/94 (41%), Positives = 69/94 (73%), Gaps = 5/94 (5%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +AL ++A+IAEIVRSG+ +V +GQMEAA A+GL ++ + + ++LPQA ++I+P L ++ Sbjct: 123 LALGLNSSAYIAEIVRSGINSVDKGQMEAARAMGLDYKTSMKEIILPQATKNILPALANE 182 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364 +++L K +S+ VGF +V + T+ +Q+ QA+ Sbjct: 183 FISLFKETSV---VGFISVVDI--TMQSQSLQAV 211 >gi|316934240|ref|YP_004109222.1| polar amino acid ABC transporter inner membrane subunit [Rhodopseudomonas palustris DX-1] gi|315601954|gb|ADU44489.1| polar amino acid ABC transporter, inner membrane subunit [Rhodopseudomonas palustris DX-1] Length = 501 Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 39/96 (40%), Positives = 62/96 (64%) Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315 F+ G+ + + I ++ + A+ AE++R GL A+PRGQ EAA ALGL++ K T L++ Sbjct: 354 FLPGNFTIDNLVRVLIGIALFAGAYNAEVIRGGLNAIPRGQAEAASALGLSYWKTTGLIV 413 Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 LPQA+R +IP L + ++ L K++SL V DL+ Sbjct: 414 LPQALRHVIPGLVNSFIALFKDTSLVSIVALFDLLG 449 >gi|229089484|ref|ZP_04220754.1| Amino acid ABC transproter, permease [Bacillus cereus Rock3-42] gi|228693870|gb|EEL47563.1| Amino acid ABC transproter, permease [Bacillus cereus Rock3-42] Length = 196 Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 50/131 (38%), Positives = 76/131 (58%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + IAL+ + A+I EI R + +V RGQMEAA +LG+ + A R ++LPQA R IP Sbjct: 50 FWAGAIALAIHNGAYITEIFRGSIQSVDRGQMEAARSLGMPYSLAMRRIVLPQAFRQSIP 109 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PL +Q++ LK+SSL VG ++L G +I Q ++ +I YL L ++ + Sbjct: 110 PLGNQFIIGLKDSSLVAYVGLSELWGSGLSIAAGNFQQLDTYIIVGLYYLVLVLLFTYLV 169 Query: 386 NRLNAKIALKE 396 N L ++ KE Sbjct: 170 NLLEKRLQRKE 180 >gi|163843977|ref|YP_001628381.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Brucella suis ATCC 23445] gi|163674700|gb|ABY38811.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Brucella suis ATCC 23445] Length = 240 Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 50/168 (29%), Positives = 90/168 (53%), Gaps = 8/168 (4%) Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279 PL +IS+ I + I + Y + P +G PE + IAL+ + ++ Sbjct: 50 PLRWISSAYIEWFRNIPFIVVLYLFFYRLPFMG--------VRLPESIVGTIALAFFASS 101 Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339 + AEI+R ++AVP+GQMEAA A+G+++ + ++ PQ +R ++PP T+ ++++K +S Sbjct: 102 YFAEIIRGAILAVPKGQMEAARAIGMSYFQGLYEIVAPQTVRLLLPPSTNTSISMVKETS 161 Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387 + + A+L G I +T EI L IY ++ + A M+R Sbjct: 162 VLSTITVAELTYQGLVIQGETFAPFEIFLTTAAIYWMITAIFAYLMHR 209 >gi|163751503|ref|ZP_02158726.1| amino acid ABC transporter, permease protein [Shewanella benthica KT99] gi|161328624|gb|EDP99774.1| amino acid ABC transporter, permease protein [Shewanella benthica KT99] Length = 225 Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 42/122 (34%), Positives = 77/122 (63%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IA + A+I+EI+R+G+ AV +GQ EAA +LGL+ R+ + V+LPQA+++I+P L ++ Sbjct: 100 IAFGLNSGAYISEIIRAGIQAVDKGQTEAARSLGLSQRQTMQEVILPQAIKNILPALGNE 159 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++ LLK +++ +G DL+ G I ++T +A + IYL L+ +++L Sbjct: 160 FIVLLKETAVIGFIGGVDLMRAGEIIRSRTFEAEVPLFTCALIYLVLTYGFTFMLSKLEL 219 Query: 391 KI 392 ++ Sbjct: 220 RL 221 >gi|119964343|ref|YP_948457.1| amino acid ABC transporter permease [Arthrobacter aurescens TC1] gi|119951202|gb|ABM10113.1| putative amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Arthrobacter aurescens TC1] Length = 254 Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 68/214 (31%), Positives = 114/214 (53%), Gaps = 14/214 (6%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 V + V GI+ + L+ + A + I T ++ GLP VL L F P+ Sbjct: 34 VLAVVSGIIGTALGMLLALMGISRNAAARWVARIYTDILRGLPP-VLTILVIGFGFG-PI 91 Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 + + GST SP M++ ALS + A+I EI RSG+ +V +GQ+EA ALG ++ + Sbjct: 92 IRELT---GST-SPYPMAIA-ALSLMSGAYIGEIFRSGIQSVDKGQLEATRALGFSYGSS 146 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF----ADLVSVGGTIINQTGQAIEI 366 RLV++PQ +R ++P L +Q++ L+K SSL +G ++ +G +G Sbjct: 147 MRLVVVPQGIRRVLPALVNQFIALIKESSLVFMLGLLATEREIFQIGKDAAANSGNLSPY 206 Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKI--ALKEKK 398 + +F YL+L+I + F+N ++A++ EKK Sbjct: 207 VAAAIF-YLALTIPLTHFVNWIDARMRAGRPEKK 239 Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust. Identities = 19/58 (32%), Positives = 30/58 (51%) Query: 91 VGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 VG NT LA I T +G L+ +S N W+ R+Y ++ R +PP++ I + Sbjct: 27 VGLPNTIVLAVVSGIIGTALGMLLALMGISRNAAARWVARIYTDILRGLPPVLTILVI 84 >gi|160896813|ref|YP_001562395.1| polar amino acid ABC transporter inner membrane protein [Delftia acidovorans SPH-1] gi|160362397|gb|ABX34010.1| polar amino acid ABC transporter, inner membrane subunit [Delftia acidovorans SPH-1] Length = 223 Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 46/136 (33%), Positives = 79/136 (58%), Gaps = 1/136 (0%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G + E +S I + AA+ +EI+R+G+ ++PRGQ+ A A+G+T+ + RLV+LPQ Sbjct: 87 GRPIGAE-VSAIITFIAFEAAYFSEIMRAGIQSIPRGQVSAGQAMGMTYGQNMRLVVLPQ 145 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378 A R+++P L +Q + L +++SL A+G D++ G+ IE L Y L Sbjct: 146 AFRNMLPVLLTQTIILFQDTSLVYAIGAYDMLKGFEVAGKNYGRPIESYLAAGVTYFVLC 205 Query: 379 IMIALFMNRLNAKIAL 394 ++ + RL+ KIA+ Sbjct: 206 YSLSWAVKRLHKKIAI 221 >gi|116514276|ref|YP_813182.1| ABC-type amino acid transport system, permease and periplasmic component [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|116093591|gb|ABJ58744.1| amino acid ABC transporter substrate-binding protein, PAAT family / amino acid ABC transporter membrane protein, PAAT family [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] Length = 500 Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 42/131 (32%), Positives = 75/131 (57%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P + IA+ + A++AE +RSG+ +V +GQ EAA +LGL+ K R V+ PQA+++I Sbjct: 365 PALAAGIIAIGLNSGAYVAEDIRSGINSVAKGQTEAARSLGLSQTKTYRYVVFPQALKNI 424 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 P L ++++ L K+SSL +G +L+ G + T + + + I M IY ++ + Sbjct: 425 WPALGNEFITLTKDSSLVSVIGVGELMYETGLVQTATYRGVMPLFITMCIYFVVTFIFTR 484 Query: 384 FMNRLNAKIAL 394 +N ++ L Sbjct: 485 LLNYFERRMNL 495 Score = 37.7 bits (86), Expect = 2.8, Method: Compositional matrix adjust. Identities = 28/106 (26%), Positives = 43/106 (40%), Gaps = 1/106 (0%) Query: 44 CVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSG 103 +N NN +K +L ++ A S S YA+ G T + Sbjct: 250 AINKTINNCQKQDL-FNKKYIPAAAKAMKQASSKTNNSMSKYASYFATGLGYTMIITICS 308 Query: 104 MIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 + ++G + RLS NKL+ I Y+E R P +V I F+Y Sbjct: 309 ITIGLVLGVIFALMRLSKNKLLHAIAVCYIEFLRGTPQMVQIMFVY 354 >gi|73661552|ref|YP_300333.1| ABC-type amino acid transport system permease component [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] gi|72494067|dbj|BAE17388.1| ABC-type amino acid transport system permease component [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] Length = 239 Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 57/201 (28%), Positives = 114/201 (56%), Gaps = 10/201 (4%) Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248 I + +F+LG+V++L T L R + + + YIS +I G P +V + + + + Sbjct: 34 ITLVTFLLGLVIALL-TALMRISTSRILRGIARFYIS--IIRGTPMIVQL---FIIFYGI 87 Query: 249 PVLGQF---NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305 P LG+ N T++P ++ I LS A+ +EI+R G++++P+GQ EAA ++G+ Sbjct: 88 PELGRLLTNNSENQWTLAPVIAAI-IGLSLNVGAYASEIIRGGIMSIPKGQTEAAYSIGM 146 Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365 +R+ + ++LPQA+R +P L + +L+L+K++SL + A++ + + T + + Sbjct: 147 NYRQTIQRIILPQAIRVSVPALGNTFLSLIKDTSLLGFILVAEMFRKAQEVASTTYEYLT 206 Query: 366 IILIWMFIYLSLSIMIALFMN 386 I L+ +Y + +I++ N Sbjct: 207 IYLLVALMYWVVCFIISIAQN 227 >gi|163760313|ref|ZP_02167396.1| amino acid ABC transporter, permease protein [Hoeflea phototrophica DFL-43] gi|162282712|gb|EDQ33000.1| amino acid ABC transporter, permease protein [Hoeflea phototrophica DFL-43] Length = 377 Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 33/82 (40%), Positives = 61/82 (74%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I ++ +++A++AE++R GL A+P+GQ EAA A+ LT + TRLV++PQA++ +IP + + Sbjct: 245 IGVALFSSAYMAEVIRGGLQAIPKGQYEAANAMALTFWQGTRLVIMPQALKLVIPGIVNT 304 Query: 331 YLNLLKNSSLAVAVGFADLVSV 352 ++ L K++SL + +G DL+ + Sbjct: 305 FIGLFKDTSLVLIIGLFDLLGI 326 >gi|283956246|ref|ZP_06373726.1| amino acid ABC tansporter, permease protein, His/Glu/Gln/Arg/opine family [Campylobacter jejuni subsp. jejuni 1336] gi|283791966|gb|EFC30755.1| amino acid ABC tansporter, permease protein, His/Glu/Gln/Arg/opine family [Campylobacter jejuni subsp. jejuni 1336] Length = 247 Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 39/94 (41%), Positives = 69/94 (73%), Gaps = 5/94 (5%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +AL ++A+IAEIVRSG+ +V +GQMEAA A+GL ++ + + ++LPQA ++I+P L ++ Sbjct: 123 LALGLNSSAYIAEIVRSGINSVDKGQMEAARAMGLDYKTSMKEIILPQATKNILPALANE 182 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364 +++L K +S+ VGF +V + T+ +Q+ QA+ Sbjct: 183 FISLFKETSV---VGFISVVDI--TMQSQSLQAV 211 >gi|126652698|ref|ZP_01724859.1| amino acid ABC transporter, permease protein [Bacillus sp. B14905] gi|126590547|gb|EAZ84665.1| amino acid ABC transporter, permease protein [Bacillus sp. B14905] Length = 235 Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 54/190 (28%), Positives = 95/190 (50%), Gaps = 13/190 (6%) Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLV-LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268 +F+ + P++ + FGLP LV ++A + L F S+ P Sbjct: 56 NFYVSFFRGTPIIMHIMLVYFGLPMLVDVVANTFHLSFQ------------SSSIPILFF 103 Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328 + +AL+ A+ +EI+RSG+++VP+GQ+EAA A+GLT +A R +LPQA IP T Sbjct: 104 VILALTFSAGAYSSEIIRSGILSVPKGQLEAAYAIGLTFTQAMRRYILPQAFGKSIPNFT 163 Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388 + ++ L +SLA + +L V + + + +E + IY +SI+ +R+ Sbjct: 164 NVFIGFLHATSLAFFLSIKELTGVANIVASVNLKFLEAFIAVGIIYWGISIITEWISHRI 223 Query: 389 NAKIALKEKK 398 ++ K Sbjct: 224 EKRVTAYSKS 233 >gi|116617557|ref|YP_817928.1| ABC-type amino acid transport system, permease and periplasmic component [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] gi|116096404|gb|ABJ61555.1| amino acid ABC transporter membrane protein, PAAT family / amino acid ABC transporter substrate-binding protein, PAAT family [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] Length = 480 Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 46/159 (28%), Positives = 78/159 (49%), Gaps = 23/159 (14%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 + LPL+ ++ F+ GLP ++ T P F + I L Sbjct: 326 RGLPLMVLAFFIYIGLPGVI-----------------------GTKIPAFTAGLITLILN 362 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 A+ VR G AV +GQMEAA +LG T+ ++ R V++PQ ++ ++P +Q++ LK Sbjct: 363 EGAYTGAFVRGGFEAVDKGQMEAARSLGFTYNRSMRKVIMPQGLKIMVPSFINQFIITLK 422 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375 ++S+ A+G +L G I+++ Q + I IYL Sbjct: 423 DTSILSAIGILELTQTGTLIVSRNSQGFRVWAIVAVIYL 461 >gi|89053120|ref|YP_508571.1| amino acid ABC transporter permease [Jannaschia sp. CCS1] gi|88862669|gb|ABD53546.1| L-aspartate ABC transporter membrane protein / L-glutamate ABC transporter membrane protein / L-glutamine ABC transporter membrane protein / L-asparagine ABC transporter membrane protein [Jannaschia sp. CCS1] Length = 445 Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 46/132 (34%), Positives = 77/132 (58%), Gaps = 7/132 (5%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I ++ ++AA+IAE++R GL A+PRGQ E A +LGL + ++ +L++LPQA++ IP + S Sbjct: 316 IMVTLFSAAYIAEVIRGGLAALPRGQYEGADSLGLNYWQSMQLIVLPQALKISIPGIVSS 375 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF-MNR-- 387 ++ L K+++L V +G D + I T I +FI++ L I F M+R Sbjct: 376 FIGLFKDTTLVVFIGLFDPIGFSNAIRADTDW--NGIYWELFIFIGLCFFICCFGMSRYS 433 Query: 388 --LNAKIALKEK 397 L K+A + Sbjct: 434 QWLERKLATDHR 445 >gi|312961013|ref|ZP_07775518.1| polar amino acid ABC transporter, inner membrane subunit [Pseudomonas fluorescens WH6] gi|311284671|gb|EFQ63247.1| polar amino acid ABC transporter, inner membrane subunit [Pseudomonas fluorescens WH6] Length = 258 Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 41/127 (32%), Positives = 73/127 (57%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IAL A++AEI+R+G+ AV +GQ EA +LG+ K R ++LPQA R I+PPL ++ Sbjct: 109 IALGLNEGAYMAEIIRAGIGAVDKGQYEAGRSLGMGFGKLMRRIVLPQAFRVIVPPLGNE 168 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 + +LKN++L +G +L+ + + T + E+ L+ +L+L+ + F L Sbjct: 169 FNVMLKNTTLVSVIGVQELLLSTQMVTSATFRVFELYLVVAIYFLTLTTLWGFFQRWLEN 228 Query: 391 KIALKEK 397 + ++ Sbjct: 229 RFGQSDR 235 >gi|294498359|ref|YP_003562059.1| putative amino acid ABC transporter permease [Bacillus megaterium QM B1551] gi|294348296|gb|ADE68625.1| putative amino acid ABC transporter, permease protein [Bacillus megaterium QM B1551] Length = 241 Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 64/216 (29%), Positives = 114/216 (52%), Gaps = 20/216 (9%) Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248 I + S LG + LF + R + K + ++Y+S + G P LV + Y + Sbjct: 26 ISIISMALGSIFGLFIA-VCRIYKIPLLKQIAVIYVS--FMRGTPLLVQL---YVFFYGI 79 Query: 249 PVLGQF------NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302 P+ +F +GG T+SP +L IA + T+A+ +E+ RS + + RGQ EAA + Sbjct: 80 PIFIEFLNETQGWHLGGDTISPLIYAL-IAYTLNTSAYQSEVFRSSIQTIDRGQFEAAYS 138 Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362 +G+T +A + ++ PQ++ + IP L + +++L+K +SLA AV +++++ I N + Sbjct: 139 IGMTTFQAIKRIIFPQSLVAAIPNLGNIFISLIKATSLAFAVKVVEIMAISKVIANDGYR 198 Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 +E+ L+ IY ++ F RL I EKK Sbjct: 199 YLEMYLVASLIYW----ILCFFFERLFVVI---EKK 227 >gi|157363724|ref|YP_001470491.1| polar amino acid ABC transporter, inner membrane subunit [Thermotoga lettingae TMO] gi|157314328|gb|ABV33427.1| polar amino acid ABC transporter, inner membrane subunit [Thermotoga lettingae TMO] Length = 202 Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 52/187 (27%), Positives = 100/187 (53%), Gaps = 27/187 (14%) Query: 204 ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVS 263 A RL F+EK +++PLL + + +GLP + G + Sbjct: 26 AARLLSSFYEKILRSIPLLVLLMLIFYGLPEI-----------------------GIRLD 62 Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P F++ + L ++A+ ++I R +++V +GQ AA+++G+T + R ++ PQA+R Sbjct: 63 P-FLACVLGLGLRSSAYQSQIFRGAILSVGKGQTLAAMSIGMTKIQIFRYIVFPQALRFS 121 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM--- 380 I P T++ +LK+SS+A A+G +L+ G II+ T + + I + IYL ++++ Sbjct: 122 IAPWTNELTIVLKDSSMAYALGVVELLRQGSYIISTTYEPMVIFITCAVIYLIMTLLANR 181 Query: 381 IALFMNR 387 + +F+ R Sbjct: 182 VMMFLER 188 >gi|104774186|ref|YP_619166.1| amino acid ABC transporter permease/substrate-binding protein [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|103423267|emb|CAI98100.1| Amino Acid ABC transporter, substrate binding /permease protein [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] Length = 493 Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 42/131 (32%), Positives = 75/131 (57%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P + IA+ + A++AE +RSG+ +V +GQ EAA +LGL+ K R V+ PQA+++I Sbjct: 358 PALAAGIIAIGLNSGAYVAEDIRSGINSVAKGQTEAARSLGLSQAKTYRYVVFPQALKNI 417 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 P L ++++ L K+SSL +G +L+ G + T + + + I M IY ++ + Sbjct: 418 WPALGNEFITLTKDSSLVSVIGVGELMYETGLVQTATYRGVMPLFITMCIYFVVTFIFTR 477 Query: 384 FMNRLNAKIAL 394 +N ++ L Sbjct: 478 LLNYFERRMNL 488 Score = 37.7 bits (86), Expect = 3.5, Method: Compositional matrix adjust. Identities = 28/106 (26%), Positives = 43/106 (40%), Gaps = 1/106 (0%) Query: 44 CVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSG 103 +N NN +K +L ++ A S S YA+ G T + Sbjct: 243 AINKTINNCQKQDL-FNKKYIPAAAKAMKQASSKTNNSMSKYASYFATGLGYTMIITICS 301 Query: 104 MIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 + ++G + RLS NKL+ I Y+E R P +V I F+Y Sbjct: 302 ITIGLVLGVIFALMRLSKNKLLHAIAVCYIEFLRGTPQMVQIMFVY 347 >gi|294675894|ref|YP_003576509.1| glutamate/aspartate ABC transporter permease BztC [Rhodobacter capsulatus SB 1003] gi|3182936|sp|Q52665|BZTC_RHOCA RecName: Full=Glutamate/glutamine/aspartate/asparagine transport system permease protein BztC gi|1655714|gb|AAB17888.1| BztC [Rhodobacter capsulatus SB 1003] gi|294474714|gb|ADE84102.1| glutamate/aspartate ABC transporter, permease protein BztC [Rhodobacter capsulatus SB 1003] Length = 434 Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 36/78 (46%), Positives = 56/78 (71%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I ++ + AA+IAE++R GL A+PRGQ EAA ALGL + +A RL+++PQA++ IP + S Sbjct: 304 ILVTLFAAAYIAEVIRGGLAALPRGQYEAADALGLDYWQAQRLIIMPQALKISIPGIVSS 363 Query: 331 YLNLLKNSSLAVAVGFAD 348 ++ L K+++L VG D Sbjct: 364 FIGLFKDTTLVAFVGLFD 381 >gi|300173515|ref|YP_003772681.1| amino acid ABC transporter [Leuconostoc gasicomitatum LMG 18811] gi|299887894|emb|CBL91862.1| Amino acid ABC transporter [Leuconostoc gasicomitatum LMG 18811] Length = 491 Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 64/203 (31%), Positives = 109/203 (53%), Gaps = 18/203 (8%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 V VLG VL+LF +LS +F K+ L +YI + G P LV + + F V Sbjct: 303 VIGAVLGTVLALF--KLSPNFILKS---LGNIYIE--YVRGTPLLVQ---AFMVFFGTQV 352 Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 +G N F + +A+ +AA++AEI+RSG+ +V GQ EAA +LGL+ K+ Sbjct: 353 IG-LNL-------SAFAAGALAMGLNSAAYVAEIIRSGINSVNYGQTEAARSLGLSKGKS 404 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370 R ++LPQA+++I+P L ++++ ++K S+ +G +L+ G + + Q +LI Sbjct: 405 MRYIILPQAIKNILPALGNEFVTVIKEGSVVSVIGVGELMFQTGVVQGASFQPFFPLLIT 464 Query: 371 MFIYLSLSIMIALFMNRLNAKIA 393 IY L+ I+ + ++A Sbjct: 465 SLIYFVLTFSISRALGYAEKRMA 487 >gi|283832682|ref|ZP_06352423.1| L-cystine ABC transporter, permease protein [Citrobacter youngae ATCC 29220] gi|291072357|gb|EFE10466.1| L-cystine ABC transporter, permease protein [Citrobacter youngae ATCC 29220] Length = 222 Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 59/207 (28%), Positives = 107/207 (51%), Gaps = 18/207 (8%) Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251 F VLG +L+L RLS LP+ +++ F I LIA + +++ P Sbjct: 32 FGLVLGFILALM--RLS--------PLLPVRWLARFYISVFRGTPLIAQLFMIYYGLP-- 79 Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311 QF G + P + I LS TAA+ AE +R+ + ++ +GQ EA ++G+T + Sbjct: 80 -QF----GIELDP-IPAAMIGLSLNTAAYAAETLRAAISSIDKGQWEAGASIGMTRWQTM 133 Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371 R +LPQA R +PPL++ +++L+K++SLA + +L I ++T + + L Sbjct: 134 RRAILPQAARVALPPLSNSFISLVKDTSLAATIQVPELFRQAQLITSRTLEVFTMYLAAS 193 Query: 372 FIYLSLSIMIALFMNRLNAKIALKEKK 398 IY ++ +++ N ++ +EK+ Sbjct: 194 LIYWVMATVLSALQNYFEEQLNRQEKE 220 Score = 39.7 bits (91), Expect = 0.89, Method: Compositional matrix adjust. Identities = 30/97 (30%), Positives = 46/97 (47%), Gaps = 8/97 (8%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G V T L+ GM ++G ++ RLS V W+ R Y+ VFR P + +F + Sbjct: 15 LLKGAVFTLQLSIGGMFFGLVLGFILALMRLSPLLPVRWLARFYISVFRGTPLIAQLFMI 74 Query: 149 YKSV----LSVLPIPDHSIVLPFGMFLNNRGLSFPTL 181 Y + + + PIP I G+ LN + TL Sbjct: 75 YYGLPQFGIELDPIPAAMI----GLSLNTAAYAAETL 107 >gi|187731045|ref|YP_001879707.1| L-cystine ABC transporter permease [Shigella boydii CDC 3083-94] gi|187428037|gb|ACD07311.1| L-cystine ABC transporter, permease protein [Shigella boydii CDC 3083-94] Length = 222 Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 62/207 (29%), Positives = 110/207 (53%), Gaps = 18/207 (8%) Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251 F +LG +L+L RLS + + L YIS F G P LIA + +++ P Sbjct: 32 FGLLLGFILALM--RLSPIWPVRW---LARFYISIFR--GTP---LIAQLFMIYYGLP-- 79 Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311 QF G + P S I LS TAA+ AE +R+ + ++ +GQ EAA ++G+T + Sbjct: 80 -QF----GIELDP-IPSAMIGLSLNTAAYAAETLRAAISSIDKGQWEAAASIGMTPWQTM 133 Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371 R +LPQA R ++PPL++ +++L+K++SLA + +L I ++T + + L Sbjct: 134 RRAILPQAARVVLPPLSNSFISLVKDTSLAATIQVPELFRQAQLITSRTLEVFTMYLAAS 193 Query: 372 FIYLSLSIMIALFMNRLNAKIALKEKK 398 IY ++ +++ N ++ +E++ Sbjct: 194 LIYWIMATVLSTLQNHFENQLNRQERE 220 Score = 37.0 bits (84), Expect = 5.9, Method: Compositional matrix adjust. Identities = 28/97 (28%), Positives = 45/97 (46%), Gaps = 8/97 (8%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G T L+ GM ++G ++ RLS V W+ R Y+ +FR P + +F + Sbjct: 15 LLKGAGYTLQLSIGGMFFGLLLGFILALMRLSPIWPVRWLARFYISIFRGTPLIAQLFMI 74 Query: 149 YKSV----LSVLPIPDHSIVLPFGMFLNNRGLSFPTL 181 Y + + + PIP I G+ LN + TL Sbjct: 75 YYGLPQFGIELDPIPSAMI----GLSLNTAAYAAETL 107 >gi|306823388|ref|ZP_07456763.1| ABC superfamily ATP binding cassette transporter, permease protein [Bifidobacterium dentium ATCC 27679] gi|309802620|ref|ZP_07696724.1| ABC transporter, permease protein [Bifidobacterium dentium JCVIHMP022] gi|304553095|gb|EFM41007.1| ABC superfamily ATP binding cassette transporter, permease protein [Bifidobacterium dentium ATCC 27679] gi|308220684|gb|EFO76992.1| ABC transporter, permease protein [Bifidobacterium dentium JCVIHMP022] Length = 327 Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 48/138 (34%), Positives = 80/138 (57%), Gaps = 1/138 (0%) Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312 +F + +V F + ++ L+ AA++AEIVR+GL AV GQ EAA ALG+ R Sbjct: 144 EFWSVDSQSVITAFNAAWLGLALNEAAYLAEIVRAGLEAVDPGQTEAAKALGMKRSLIMR 203 Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA-DLVSVGGTIINQTGQAIEIILIWM 371 ++LPQAMR IIPP ++++ +LK +SL AV F +L I + + I ++++ Sbjct: 204 RIVLPQAMRIIIPPTGNEFIGMLKTTSLVNAVPFTLELQFATTAIATRLYKPIPLLIVAC 263 Query: 372 FIYLSLSIMIALFMNRLN 389 YL ++ ++ + +RL Sbjct: 264 IWYLVITSILMIIQSRLE 281 >gi|260429908|ref|ZP_05783883.1| ABC polar amino acid family transporter, inner membrane subunit [Citreicella sp. SE45] gi|260418831|gb|EEX12086.1| ABC polar amino acid family transporter, inner membrane subunit [Citreicella sp. SE45] Length = 296 Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 59/174 (33%), Positives = 96/174 (55%), Gaps = 23/174 (13%) Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF--MSLYIALSCYTAA--------- 279 G P LV + Y L P + GG P+ +S +A+S +TAA Sbjct: 115 GTPVLVQLVFWYNLAAIFPDVSLGIPFGG----PKLFEISATVAISSFTAALLGLGFNEG 170 Query: 280 -FIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT--RLVLLPQAMRSIIPPLTSQYLNLLK 336 ++AEI+R+GL +V GQ EA+ ALG HR A R+++LPQAM++IIPP +Q + +LK Sbjct: 171 AYMAEIIRAGLTSVDHGQTEASRALG--HRPAQTFRVIVLPQAMKAIIPPTGNQVIGMLK 228 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILI---WMFIYLSLSIMIALFMNR 387 +SLA V +L+ TI ++T Q + ++++ W I +S+ ++ ++ R Sbjct: 229 YTSLASVVALGELMHSVETIYSRTFQTMPMLIVAALWYLILVSILSVVQYYIER 282 Score = 41.2 bits (95), Expect = 0.31, Method: Compositional matrix adjust. Identities = 28/80 (35%), Positives = 42/80 (52%), Gaps = 3/80 (3%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G T WL M+ T+IG +V RLS ++++ +V FR P LV + F Sbjct: 66 VLRGVGMTLWLTLLVMVMGTVIGIIVAVMRLSNDRILNGTAVAFVWFFRGTPVLVQLVFW 125 Query: 149 YKSVLSVLPIPDHSIVLPFG 168 Y L+ + PD S+ +PFG Sbjct: 126 YN--LAAI-FPDVSLGIPFG 142 >gi|121610412|ref|YP_998219.1| polar amino acid ABC transporter inner membrane subunit [Verminephrobacter eiseniae EF01-2] gi|121555052|gb|ABM59201.1| polar amino acid ABC transporter, inner membrane subunit [Verminephrobacter eiseniae EF01-2] Length = 231 Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 47/149 (31%), Positives = 84/149 (56%), Gaps = 15/149 (10%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 + +PLL + F FG L+ +A+K ++ + I G+T AL Y Sbjct: 65 RCVPLLVHAMFWYFGATELLPLAVKEWIYEQ-----DLSMIAGAT----------ALIVY 109 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 +A+F+AE +RSG+ ++ GQ+EAA ALG ++ R V+ PQA+ ++IPPL Q + + K Sbjct: 110 SASFVAEDIRSGIRSISGGQIEAARALGFGFLRSFRWVIFPQAIEAVIPPLIGQAMVITK 169 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIE 365 N+S+ + +G +L++ + + T + +E Sbjct: 170 NTSVTLMIGVVELINATRRVQDATFRIVE 198 >gi|288934567|ref|YP_003438626.1| polar amino acid ABC transporter inner membrane subunit [Klebsiella variicola At-22] gi|288889276|gb|ADC57594.1| polar amino acid ABC transporter, inner membrane subunit [Klebsiella variicola At-22] Length = 222 Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 63/207 (30%), Positives = 109/207 (52%), Gaps = 18/207 (8%) Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251 F VLG VL+L R+S + K L +YIS F G P LIA + +++ P Sbjct: 32 FGLVLGFVLALM--RMSPLWPVKW---LARMYISIFR--GTP---LIAQLFMIYYGLP-- 79 Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311 QF G + P + I LS TAA+ AE +R+ + ++ +GQ EAA ++G+T + Sbjct: 80 -QF----GIELDP-IPAAMIGLSLNTAAYAAETLRAAIASIDKGQWEAAASIGMTPWQTM 133 Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371 R +LPQA R +PPL++ +++L+K++SLA + +L I ++T + + L Sbjct: 134 RRAILPQAARVALPPLSNSFISLVKDTSLAATIQVPELFRQAQLITSRTLEVFTMYLAAS 193 Query: 372 FIYLSLSIMIALFMNRLNAKIALKEKK 398 IY ++ +++ N ++ +E+ Sbjct: 194 LIYWVMATVLSSLQNYFENQLNRQERD 220 Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust. Identities = 28/97 (28%), Positives = 47/97 (48%), Gaps = 8/97 (8%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G V T L+ GM ++G ++ R+S V W+ R+Y+ +FR P + +F + Sbjct: 15 LLKGAVFTLQLSIGGMFFGLVLGFVLALMRMSPLWPVKWLARMYISIFRGTPLIAQLFMI 74 Query: 149 YKSV----LSVLPIPDHSIVLPFGMFLNNRGLSFPTL 181 Y + + + PIP I G+ LN + TL Sbjct: 75 YYGLPQFGIELDPIPAAMI----GLSLNTAAYAAETL 107 >gi|261314497|ref|ZP_05953694.1| polar amino acid ABC transporter [Brucella pinnipedialis M163/99/10] gi|261303523|gb|EEY07020.1| polar amino acid ABC transporter [Brucella pinnipedialis M163/99/10] Length = 357 Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 35/82 (42%), Positives = 59/82 (71%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I ++ + +A++AE+VR GL A+PRGQ E A ALGL++ + T LV+LPQA++ +IP + + Sbjct: 225 IGVALFASAYMAEVVRGGLQAIPRGQYEGADALGLSYWQKTGLVVLPQALKLVIPGIVNT 284 Query: 331 YLNLLKNSSLAVAVGFADLVSV 352 ++ L K++SL +G DL+ + Sbjct: 285 FIGLFKDTSLVYIIGMFDLLGI 306 >gi|115358739|ref|YP_775877.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria AMMD] gi|115284027|gb|ABI89543.1| amino acid ABC transporter membrane protein, PAAT family / amino acid ABC transporter ATP-binding protein, PAAT family [Burkholderia ambifaria AMMD] Length = 500 Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 58/183 (31%), Positives = 95/183 (51%), Gaps = 10/183 (5%) Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252 +++LG++L F L+R H K +YI F LP LVL+ Y L P Sbjct: 31 AWLLGVLLG-FPVALARQSHRPLLKRAAAVYIWFFR--SLPLLVLLVFIYNLPQVFPATS 87 Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312 + +S F + IA+ A+ AEI R G+++VPRGQ+EA ALG+ R Sbjct: 88 -------AVLSDPFTAGLIAMVLSETAYFAEIHRGGILSVPRGQLEAGRALGIRFAGIQR 140 Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372 L+++PQA+R +P L ++++ ++K +SL + A+++ VG + Q E +L F Sbjct: 141 LIVMPQAIRIALPALANEFITIVKLTSLVSVISLAEILLVGQRLYTQNFLVFETMLAVAF 200 Query: 373 IYL 375 Y+ Sbjct: 201 YYV 203 >gi|297562617|ref|YP_003681591.1| polar amino acid ABC transporter inner membrane subunit [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296847065|gb|ADH69085.1| polar amino acid ABC transporter, inner membrane subunit [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 310 Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 65/183 (35%), Positives = 97/183 (53%), Gaps = 34/183 (18%) Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL----YISTFLIFGLPTLV 236 +T+ V VLGIVL++ RLS + P+L ++ T+ G+P LV Sbjct: 68 ITLSATVLSMVIGVVLGIVLAVM--RLSGN---------PVLVSVSWLYTWFFRGVPRLV 116 Query: 237 L------IALKYQ-----LHFDK---PVLG-----QFNFIGGSTVSPEFMSLYIALSCYT 277 L IA+ YQ L FD P LG +F I TV + + +ALS Sbjct: 117 LAVLFGNIAILYQTIEFGLPFDNYWMPWLGLEGDARFFEIDTRTVLSGYTAGLLALSLSE 176 Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 A++AEI+R+GL +V +GQ EAA ALG+ K R + LPQAMR ++PP ++ + +LK+ Sbjct: 177 GAYMAEIIRAGLQSVNKGQTEAAQALGMGKGKVLRRITLPQAMRVVVPPTGNETIAMLKD 236 Query: 338 SSL 340 ++L Sbjct: 237 TAL 239 >gi|323339542|ref|ZP_08079817.1| glutamate ABC superfamily ATP binding cassette transporter permease protein [Lactobacillus ruminis ATCC 25644] gi|323093022|gb|EFZ35619.1| glutamate ABC superfamily ATP binding cassette transporter permease protein [Lactobacillus ruminis ATCC 25644] Length = 229 Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 42/125 (33%), Positives = 75/125 (60%), Gaps = 4/125 (3%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IAL + A+ AEI RSG+I+VP+GQ EA ++LGL ++LPQA+R+++P L ++ Sbjct: 99 IALGINSGAYTAEIFRSGIISVPKGQTEAGLSLGLDELTTMTSIVLPQAVRNVLPALCNE 158 Query: 331 YLNLLKNSSLAVAVGFADLVS----VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386 +++L+K SS+ +G DL + +GGT+ + I +I+ + LS +++ Sbjct: 159 FISLIKESSVLFYIGVQDLTAQALGIGGTLYDFVPPLIVAAIIYFILTFLLSQSVSVLEK 218 Query: 387 RLNAK 391 ++ K Sbjct: 219 KMGKK 223 Score = 45.8 bits (107), Expect = 0.012, Method: Compositional matrix adjust. Identities = 23/82 (28%), Positives = 44/82 (53%) Query: 83 SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142 S Y G T ++ G+ ++G +V + R+S K+++W+ R YV + R P + Sbjct: 6 SKYYPLFFCGTAQTVIISLIGVAIGILLGLIVVSMRMSDFKVLSWLARCYVSIVRGTPAM 65 Query: 143 VVIFFLYKSVLSVLPIPDHSIV 164 + + +Y S+ +L +PD SI+ Sbjct: 66 IQVMLIYYSLSKLLELPDVSIL 87 >gi|220913228|ref|YP_002488537.1| polar amino acid ABC transporter inner membrane protein [Arthrobacter chlorophenolicus A6] gi|219860106|gb|ACL40448.1| polar amino acid ABC transporter, inner membrane subunit [Arthrobacter chlorophenolicus A6] Length = 254 Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 46/134 (34%), Positives = 84/134 (62%), Gaps = 7/134 (5%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +AL+ AA+I EI RSG+ +V +GQ+EA+ ALG ++ + RLV++PQ +R ++P L +Q Sbjct: 107 LALTLIAAAYIGEIFRSGIQSVEKGQLEASRALGFSYGSSMRLVVVPQGIRRVLPALVNQ 166 Query: 331 YLNLLKNSSLAVAVGFA----DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386 +++LLK+SSL +G A ++ +G + TG + ++ +YL L++ + F+N Sbjct: 167 FISLLKDSSLVFMLGLAASDREIFRIGNDAMANTGN-LSPLVAAGVLYLILTVPLTHFVN 225 Query: 387 RLNAKI--ALKEKK 398 ++ ++ EKK Sbjct: 226 FIDNRLRTGRPEKK 239 >gi|229095070|ref|ZP_04226066.1| Amino acid ABC transproter, permease [Bacillus cereus Rock3-29] gi|229101172|ref|ZP_04231938.1| Amino acid ABC transproter, permease [Bacillus cereus Rock3-28] gi|229114024|ref|ZP_04243450.1| Amino acid ABC transproter, permease [Bacillus cereus Rock1-3] gi|228669483|gb|EEL24899.1| Amino acid ABC transproter, permease [Bacillus cereus Rock1-3] gi|228682300|gb|EEL36411.1| Amino acid ABC transproter, permease [Bacillus cereus Rock3-28] gi|228688400|gb|EEL42282.1| Amino acid ABC transproter, permease [Bacillus cereus Rock3-29] Length = 230 Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 73/223 (32%), Positives = 117/223 (52%), Gaps = 19/223 (8%) Query: 177 SFPTLTMDT--NAKIFVFSFVLGIVLSL-FATRLSRHFHEKTGKALPLLYISTFLIFGLP 233 ++PTL T ++ + S VLG ++ L FA R + K ++ +YI+ +I G P Sbjct: 8 TYPTLLKATIVTLQLTLTSLVLGSLIGLLFA--FFRISNNKVLNSIAHVYIA--IIRGTP 63 Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293 +V IA+ Y F +P F + IAL+ + A+I EI R + +V Sbjct: 64 LIVQIAILY-----------FGITSVVVFTP-FWAGAIALAIHNGAYITEIFRGSIQSVD 111 Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353 RGQ+EAA +LG+ + A R ++LPQA R +PPL +Q++ LK+SSL VG ++L G Sbjct: 112 RGQLEAARSLGMPYPLAMRRIILPQAFRLSLPPLGNQFIIGLKDSSLVAYVGLSELWGSG 171 Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 +I Q ++ +I YL L ++ F+N L ++ KE Sbjct: 172 LSIAASNFQQLDTYVIVGLYYLVLVLLFTYFVNLLEKRLQRKE 214 Score = 36.2 bits (82), Expect = 9.6, Method: Compositional matrix adjust. Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 1/74 (1%) Query: 83 SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142 S+Y T +L + T L + ++ ++IG L R+S NK++ I VY+ + R P + Sbjct: 7 STYPT-LLKATIVTLQLTLTSLVLGSLIGLLFAFFRISNNKVLNSIAHVYIAIIRGTPLI 65 Query: 143 VVIFFLYKSVLSVL 156 V I LY + SV+ Sbjct: 66 VQIAILYFGITSVV 79 >gi|167579226|ref|ZP_02372100.1| glutamine ABC transporter permease protein [Burkholderia thailandensis TXDOH] Length = 218 Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 60/208 (28%), Positives = 103/208 (49%), Gaps = 23/208 (11%) Query: 177 SFPTLTMDTNAKIFVF------SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230 + P LT +F+ F++G++ +F R + L +YI LI Sbjct: 11 ALPDLTDGVRLTVFIAFFGLAGGFLVGMIAGMF-----RAYGPAALNVLTQVYIE--LIR 63 Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290 G P +V + L+F P+L G + +A++ + A++AE+VR L+ Sbjct: 64 GTPIVVQVMF---LYFALPMLAHIRIDG-------LTAAIVAITLNSGAYLAEVVRGALL 113 Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 ++P+G EA +A+GL+ + ++ P A R +IPPL +Q + LK++SL + +G +L Sbjct: 114 SIPKGLTEAGLAMGLSMPRVLVKIVGPLAFRRLIPPLGNQCIVSLKDTSLFIVIGVGELT 173 Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLS 378 G II QA+EI IYL+L+ Sbjct: 174 RKGQEIIAGNFQAVEIWTAVAAIYLALT 201 >gi|70729726|ref|YP_259465.1| amino acid ABC transporter [Pseudomonas fluorescens Pf-5] gi|68344025|gb|AAY91631.1| amino acid ABC transporter [Pseudomonas fluorescens Pf-5] Length = 219 Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 42/133 (31%), Positives = 80/133 (60%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P M+ I LS + A + A+++R+G+++V GQ+E A ++GL+ +A R V++PQA+RS Sbjct: 87 PALMAGIIGLSLHFAVYNADVIRAGVLSVDPGQIEGARSIGLSRSQAQRYVIVPQALRST 146 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 + PL + + LLK++SL +G A+LV +++T E L IY ++++++ Sbjct: 147 LAPLGNNLIVLLKDTSLVSIIGIAELVYSAQRAVSETYSPFEFYLAVAVIYYAVNLVLEA 206 Query: 384 FMNRLNAKIALKE 396 ++ L K+ + Sbjct: 207 GLHLLETKVEMSR 219 >gi|15800562|ref|NP_286574.1| glutamine ABC transporter permease protein [Escherichia coli O157:H7 EDL933] gi|15830142|ref|NP_308915.1| glutamine ABC transporter permease [Escherichia coli O157:H7 str. Sakai] gi|16128778|ref|NP_415331.1| glutamine transporter subunit [Escherichia coli str. K-12 substr. MG1655] gi|24112178|ref|NP_706688.1| glutamine ABC transporter permease protein [Shigella flexneri 2a str. 301] gi|26246785|ref|NP_752825.1| glutamine ABC transporter permease [Escherichia coli CFT073] gi|30062294|ref|NP_836465.1| glutamine ABC transporter permease protein [Shigella flexneri 2a str. 2457T] gi|74311353|ref|YP_309772.1| glutamine ABC transporter permease [Shigella sonnei Ss046] gi|82543256|ref|YP_407203.1| glutamine ABC transporter permease protein [Shigella boydii Sb227] gi|82776111|ref|YP_402458.1| glutamine ABC transporter permease protein [Shigella dysenteriae Sd197] gi|89107661|ref|AP_001441.1| glutamine transporter subunit [Escherichia coli str. K-12 substr. W3110] gi|91209844|ref|YP_539830.1| glutamine ABC transporter permease [Escherichia coli UTI89] gi|110641014|ref|YP_668742.1| glutamine ABC transporter permease protein [Escherichia coli 536] gi|110804810|ref|YP_688330.1| glutamine ABC transporter permease [Shigella flexneri 5 str. 8401] gi|117622991|ref|YP_851904.1| glutamine ABC transporter permease protein [Escherichia coli APEC O1] gi|157157493|ref|YP_001462004.1| glutamine ABC transporter permease protein [Escherichia coli E24377A] gi|157160287|ref|YP_001457605.1| glutamine ABC transporter permease protein [Escherichia coli HS] gi|168749989|ref|ZP_02775011.1| glutamine ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4113] gi|168764283|ref|ZP_02789290.1| glutamine ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4501] gi|168777206|ref|ZP_02802213.1| glutamine ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4196] gi|168779357|ref|ZP_02804364.1| glutamine ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4076] gi|168787026|ref|ZP_02812033.1| glutamine ABC transporter, permease protein [Escherichia coli O157:H7 str. EC869] gi|168799913|ref|ZP_02824920.1| glutamine ABC transporter, permease protein [Escherichia coli O157:H7 str. EC508] gi|170020834|ref|YP_001725788.1| glutamine ABC transporter permease protein [Escherichia coli ATCC 8739] gi|170080469|ref|YP_001729789.1| glutamine ABC transporter membrane protein [Escherichia coli str. K-12 substr. DH10B] gi|170683637|ref|YP_001742914.1| glutamine ABC transporter permease [Escherichia coli SMS-3-5] gi|188493452|ref|ZP_03000722.1| glutamine ABC transporter, permease protein [Escherichia coli 53638] gi|191166172|ref|ZP_03028006.1| glutamine ABC transporter, permease protein [Escherichia coli B7A] gi|191173751|ref|ZP_03035274.1| glutamine ABC transporter, permease protein [Escherichia coli F11] gi|193064434|ref|ZP_03045515.1| glutamine ABC transporter, permease protein [Escherichia coli E22] gi|193069376|ref|ZP_03050331.1| glutamine ABC transporter, permease protein [Escherichia coli E110019] gi|194428172|ref|ZP_03060715.1| glutamine ABC transporter, permease protein [Escherichia coli B171] gi|194438438|ref|ZP_03070528.1| glutamine ABC transporter, permease protein [Escherichia coli 101-1] gi|195936851|ref|ZP_03082233.1| glutamine ABC transporter permease protein [Escherichia coli O157:H7 str. EC4024] gi|208809031|ref|ZP_03251368.1| glutamine ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4206] gi|208815025|ref|ZP_03256204.1| glutamine ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4045] gi|208822695|ref|ZP_03263014.1| glutamine ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4042] gi|209399532|ref|YP_002269480.1| glutamine ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4115] gi|209918057|ref|YP_002292141.1| glutamine ABC transporter permease [Escherichia coli SE11] gi|215485897|ref|YP_002328328.1| glutamine ABC transporter permease protein [Escherichia coli O127:H6 str. E2348/69] gi|217324127|ref|ZP_03440211.1| glutamine ABC transporter, permease protein [Escherichia coli O157:H7 str. TW14588] gi|218553396|ref|YP_002386309.1| glutamine ABC transporter permease [Escherichia coli IAI1] gi|218557715|ref|YP_002390628.1| glutamine ABC transporter permease protein [Escherichia coli S88] gi|218688596|ref|YP_002396808.1| glutamine ABC transporter permease [Escherichia coli ED1a] gi|218694284|ref|YP_002401951.1| glutamine ABC transporter permease protein [Escherichia coli 55989] gi|218699184|ref|YP_002406813.1| glutamine ABC transporter permease [Escherichia coli IAI39] gi|218704188|ref|YP_002411707.1| glutamine ABC transporter permease protein [Escherichia coli UMN026] gi|227884227|ref|ZP_04002032.1| glutamine ABC superfamily ATP binding cassette transporter, permease protein [Escherichia coli 83972] gi|237707230|ref|ZP_04537711.1| glutamine transporter subunit [Escherichia sp. 3_2_53FAA] gi|238900069|ref|YP_002925865.1| glutamine transporter subunit [Escherichia coli BW2952] gi|253774187|ref|YP_003037018.1| glutamine ABC transporter permease [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254160887|ref|YP_003043995.1| glutamine ABC transporter permease [Escherichia coli B str. REL606] gi|254792005|ref|YP_003076842.1| glutamine ABC transporter permease [Escherichia coli O157:H7 str. TW14359] gi|256021119|ref|ZP_05434984.1| glutamine ABC transporter permease protein [Shigella sp. D9] gi|256023594|ref|ZP_05437459.1| glutamine ABC transporter permease protein [Escherichia sp. 4_1_40B] gi|260843053|ref|YP_003220831.1| glutamine high-affinity transport system, membrane component [Escherichia coli O103:H2 str. 12009] gi|261225459|ref|ZP_05939740.1| glutamine transporter subunit; membrane component of ABC superfamily protein [Escherichia coli O157:H7 str. FRIK2000] gi|261258572|ref|ZP_05951105.1| glutamine high-affinity transport system, membrane component [Escherichia coli O157:H7 str. FRIK966] gi|291281807|ref|YP_003498625.1| Glutamine transport system permease protein glnP [Escherichia coli O55:H7 str. CB9615] gi|293404110|ref|ZP_06648104.1| glnP [Escherichia coli FVEC1412] gi|293409186|ref|ZP_06652762.1| glnP [Escherichia coli B354] gi|293433071|ref|ZP_06661499.1| glnP [Escherichia coli B088] gi|300816458|ref|ZP_07096680.1| glutamine ABC transporter permease protein [Escherichia coli MS 107-1] gi|300824271|ref|ZP_07104388.1| glutamine ABC transporter permease protein [Escherichia coli MS 119-7] gi|300898302|ref|ZP_07116652.1| glutamine ABC transporter permease protein [Escherichia coli MS 198-1] gi|300907140|ref|ZP_07124805.1| glutamine ABC transporter permease protein [Escherichia coli MS 84-1] gi|300920060|ref|ZP_07136518.1| glutamine ABC transporter permease protein [Escherichia coli MS 115-1] gi|300922835|ref|ZP_07138921.1| glutamine ABC transporter permease protein [Escherichia coli MS 182-1] gi|300929386|ref|ZP_07144856.1| glutamine ABC transporter permease protein [Escherichia coli MS 187-1] gi|300939847|ref|ZP_07154484.1| glutamine ABC transporter permease protein [Escherichia coli MS 21-1] gi|300947106|ref|ZP_07161322.1| glutamine ABC transporter permease protein [Escherichia coli MS 116-1] gi|300957009|ref|ZP_07169258.1| glutamine ABC transporter permease protein [Escherichia coli MS 175-1] gi|300993337|ref|ZP_07180353.1| glutamine ABC transporter permease protein [Escherichia coli MS 45-1] gi|301027259|ref|ZP_07190618.1| glutamine ABC transporter permease protein [Escherichia coli MS 196-1] gi|301051267|ref|ZP_07198095.1| glutamine ABC transporter permease protein [Escherichia coli MS 185-1] gi|301303568|ref|ZP_07209690.1| glutamine ABC transporter permease protein [Escherichia coli MS 124-1] gi|301328004|ref|ZP_07221167.1| glutamine ABC transporter permease protein [Escherichia coli MS 78-1] gi|301646242|ref|ZP_07246137.1| glutamine ABC transporter permease protein [Escherichia coli MS 146-1] gi|306812787|ref|ZP_07446980.1| glutamine ABC transporter permease protein [Escherichia coli NC101] gi|307137435|ref|ZP_07496791.1| glutamine ABC transporter permease protein [Escherichia coli H736] gi|307313780|ref|ZP_07593397.1| polar amino acid ABC transporter, inner membrane subunit [Escherichia coli W] gi|309786523|ref|ZP_07681146.1| glutamine transport system permease protein glnP [Shigella dysenteriae 1617] gi|309798040|ref|ZP_07692416.1| glutamine ABC transporter permease protein [Escherichia coli MS 145-7] gi|312969166|ref|ZP_07783373.1| glutamine transport system permease protein glnP [Escherichia coli 2362-75] gi|312970887|ref|ZP_07785066.1| glutamine transport system permease protein glnP [Escherichia coli 1827-70] gi|331641326|ref|ZP_08342461.1| glutamine transport system permease protein GlnP [Escherichia coli H736] gi|331646029|ref|ZP_08347132.1| glutamine transport system permease protein GlnP [Escherichia coli M605] gi|331651819|ref|ZP_08352838.1| glutamine transport system permease protein GlnP [Escherichia coli M718] gi|331656831|ref|ZP_08357793.1| glutamine transport system permease protein GlnP [Escherichia coli TA206] gi|331662167|ref|ZP_08363090.1| glutamine transport system permease protein GlnP [Escherichia coli TA143] gi|331667179|ref|ZP_08368044.1| glutamine transport system permease protein GlnP [Escherichia coli TA271] gi|331672316|ref|ZP_08373107.1| glutamine transport system permease protein GlnP [Escherichia coli TA280] gi|331676548|ref|ZP_08377244.1| glutamine transport system permease protein GlnP [Escherichia coli H591] gi|331682317|ref|ZP_08382936.1| glutamine transport system permease protein GlnP [Escherichia coli H299] gi|84028669|sp|P0AEQ8|GLNP_ECO57 RecName: Full=Glutamine transport system permease protein glnP gi|84028670|sp|P0AEQ7|GLNP_ECOL6 RecName: Full=Glutamine transport system permease protein glnP gi|84028671|sp|P0AEQ6|GLNP_ECOLI RecName: Full=Glutamine transport system permease protein glnP gi|84028672|sp|P0AEQ9|GLNP_SHIFL RecName: Full=Glutamine transport system permease protein glnP gi|12513809|gb|AAG55182.1|AE005262_2 glutamine high-affinity transport system; membrane component [Escherichia coli O157:H7 str. EDL933] gi|26107184|gb|AAN79368.1|AE016757_272 Glutamine transport system permease protein glnP [Escherichia coli CFT073] gi|41572|emb|CAA32383.1| unnamed protein product [Escherichia coli K-12] gi|1787030|gb|AAC73897.1| glutamine transporter subunit [Escherichia coli str. K-12 substr. MG1655] gi|4062376|dbj|BAA35482.1| glutamine transporter subunit [Escherichia coli str. K12 substr. W3110] gi|13360347|dbj|BAB34311.1| membrane component of glutamine high-affinity transport system [Escherichia coli O157:H7 str. Sakai] gi|24051018|gb|AAN42395.1| glutamine transport protein GlnP [Shigella flexneri 2a str. 301] gi|30040539|gb|AAP16271.1| glutamine transport protein GlnP [Shigella flexneri 2a str. 2457T] gi|73854830|gb|AAZ87537.1| glutamine high-affinity transport system membrane component [Shigella sonnei Ss046] gi|81240259|gb|ABB60969.1| glutamine high-affinity transport system, membrane component [Shigella dysenteriae Sd197] gi|81244667|gb|ABB65375.1| glutamine high-affinity transport system, membrane component [Shigella boydii Sb227] gi|91071418|gb|ABE06299.1| glutamine transport system permease protein glnP [Escherichia coli UTI89] gi|110342606|gb|ABG68843.1| glutamine transport system permease protein GlnP [Escherichia coli 536] gi|110614358|gb|ABF03025.1| glutamine high-affinity transport system [Shigella flexneri 5 str. 8401] gi|115512115|gb|ABJ00190.1| glutamine transport protein GlnP [Escherichia coli APEC O1] gi|157065967|gb|ABV05222.1| glutamine ABC transporter, permease protein [Escherichia coli HS] gi|157079523|gb|ABV19231.1| glutamine ABC transporter, permease protein [Escherichia coli E24377A] gi|169755762|gb|ACA78461.1| polar amino acid ABC transporter, inner membrane subunit [Escherichia coli ATCC 8739] gi|169888304|gb|ACB02011.1| glutamine transporter subunit; membrane component of ABC superfamily [Escherichia coli str. K-12 substr. DH10B] gi|170521355|gb|ACB19533.1| glutamine ABC transporter, permease protein [Escherichia coli SMS-3-5] gi|187767493|gb|EDU31337.1| glutamine ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4196] gi|188015705|gb|EDU53827.1| glutamine ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4113] gi|188488651|gb|EDU63754.1| glutamine ABC transporter, permease protein [Escherichia coli 53638] gi|189002956|gb|EDU71942.1| glutamine ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4076] gi|189365687|gb|EDU84103.1| glutamine ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4501] gi|189373069|gb|EDU91485.1| glutamine ABC transporter, permease protein [Escherichia coli O157:H7 str. EC869] gi|189377797|gb|EDU96213.1| glutamine ABC transporter, permease protein [Escherichia coli O157:H7 str. EC508] gi|190903781|gb|EDV63496.1| glutamine ABC transporter, permease protein [Escherichia coli B7A] gi|190906001|gb|EDV65617.1| glutamine ABC transporter, permease protein [Escherichia coli F11] gi|192928896|gb|EDV82509.1| glutamine ABC transporter, permease protein [Escherichia coli E22] gi|192957329|gb|EDV87777.1| glutamine ABC transporter, permease protein [Escherichia coli E110019] gi|194413732|gb|EDX30011.1| glutamine ABC transporter, permease protein [Escherichia coli B171] gi|194422662|gb|EDX38659.1| glutamine ABC transporter, permease protein [Escherichia coli 101-1] gi|208728832|gb|EDZ78433.1| glutamine ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4206] gi|208731673|gb|EDZ80361.1| glutamine ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4045] gi|208738180|gb|EDZ85863.1| glutamine ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4042] gi|209160932|gb|ACI38365.1| glutamine ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4115] gi|209775798|gb|ACI86211.1| membrane component of glutamine high-affinity transport system [Escherichia coli] gi|209775800|gb|ACI86212.1| membrane component of glutamine high-affinity transport system [Escherichia coli] gi|209775802|gb|ACI86213.1| membrane component of glutamine high-affinity transport system [Escherichia coli] gi|209775804|gb|ACI86214.1| membrane component of glutamine high-affinity transport system [Escherichia coli] gi|209775806|gb|ACI86215.1| membrane component of glutamine high-affinity transport system [Escherichia coli] gi|209911316|dbj|BAG76390.1| glutamine ABC transporter permease component [Escherichia coli SE11] gi|215263969|emb|CAS08310.1| glutamine transporter subunit [Escherichia coli O127:H6 str. E2348/69] gi|217320348|gb|EEC28772.1| glutamine ABC transporter, permease protein [Escherichia coli O157:H7 str. TW14588] gi|218351016|emb|CAU96720.1| glutamine transporter subunit ; membrane component of ABC superfamily [Escherichia coli 55989] gi|218360164|emb|CAQ97713.1| glutamine transporter subunit ; membrane component of ABC superfamily [Escherichia coli IAI1] gi|218364484|emb|CAR02166.1| glutamine transporter subunit ; membrane component of ABC superfamily [Escherichia coli S88] gi|218369170|emb|CAR16925.1| glutamine transporter subunit ; membrane component of ABC superfamily [Escherichia coli IAI39] gi|218426160|emb|CAR06980.1| glutamine transporter subunit ; membrane component of ABC superfamily [Escherichia coli ED1a] gi|218431285|emb|CAR12163.1| glutamine transporter subunit ; membrane component of ABC superfamily [Escherichia coli UMN026] gi|222032540|emb|CAP75279.1| glutamine transport system permease protein glnP [Escherichia coli LF82] gi|226898440|gb|EEH84699.1| glutamine transporter subunit [Escherichia sp. 3_2_53FAA] gi|227838979|gb|EEJ49445.1| glutamine ABC superfamily ATP binding cassette transporter, permease protein [Escherichia coli 83972] gi|238861340|gb|ACR63338.1| glutamine transporter subunit [Escherichia coli BW2952] gi|242376602|emb|CAQ31311.1| glnP, subunit of glutamine ABC transporter [Escherichia coli BL21(DE3)] gi|253325231|gb|ACT29833.1| polar amino acid ABC transporter, inner membrane subunit [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253972788|gb|ACT38459.1| glutamine ABC transporter permease protein [Escherichia coli B str. REL606] gi|253977008|gb|ACT42678.1| glutamine ABC transporter permease protein [Escherichia coli BL21(DE3)] gi|254591405|gb|ACT70766.1| glutamine transporter subunit; membrane component of ABC superfamily [Escherichia coli O157:H7 str. TW14359] gi|257758200|dbj|BAI29697.1| glutamine high-affinity transport system, membrane component [Escherichia coli O103:H2 str. 12009] gi|260450043|gb|ACX40465.1| polar amino acid ABC transporter, inner membrane subunit [Escherichia coli DH1] gi|281177946|dbj|BAI54276.1| glutamine ABC transporter permease component [Escherichia coli SE15] gi|281600135|gb|ADA73119.1| Glutamine transport system permease protein glnP [Shigella flexneri 2002017] gi|284920662|emb|CBG33725.1| glutamine ABC transporter, permease protein [Escherichia coli 042] gi|290761680|gb|ADD55641.1| Glutamine transport system permease protein glnP [Escherichia coli O55:H7 str. CB9615] gi|291323890|gb|EFE63312.1| glnP [Escherichia coli B088] gi|291428696|gb|EFF01721.1| glnP [Escherichia coli FVEC1412] gi|291469654|gb|EFF12138.1| glnP [Escherichia coli B354] gi|294492644|gb|ADE91400.1| glutamine ABC transporter, permease protein [Escherichia coli IHE3034] gi|299879364|gb|EFI87575.1| glutamine ABC transporter permease protein [Escherichia coli MS 196-1] gi|300297084|gb|EFJ53469.1| glutamine ABC transporter permease protein [Escherichia coli MS 185-1] gi|300316228|gb|EFJ66012.1| glutamine ABC transporter permease protein [Escherichia coli MS 175-1] gi|300358026|gb|EFJ73896.1| glutamine ABC transporter permease protein [Escherichia coli MS 198-1] gi|300401107|gb|EFJ84645.1| glutamine ABC transporter permease protein [Escherichia coli MS 84-1] gi|300406630|gb|EFJ90168.1| glutamine ABC transporter permease protein [Escherichia coli MS 45-1] gi|300412926|gb|EFJ96236.1| glutamine ABC transporter permease protein [Escherichia coli MS 115-1] gi|300420867|gb|EFK04178.1| glutamine ABC transporter permease protein [Escherichia coli MS 182-1] gi|300453255|gb|EFK16875.1| glutamine ABC transporter permease protein [Escherichia coli MS 116-1] gi|300455311|gb|EFK18804.1| glutamine ABC transporter permease protein [Escherichia coli MS 21-1] gi|300462651|gb|EFK26144.1| glutamine ABC transporter permease protein [Escherichia coli MS 187-1] gi|300523245|gb|EFK44314.1| glutamine ABC transporter permease protein [Escherichia coli MS 119-7] gi|300531148|gb|EFK52210.1| glutamine ABC transporter permease protein [Escherichia coli MS 107-1] gi|300841067|gb|EFK68827.1| glutamine ABC transporter permease protein [Escherichia coli MS 124-1] gi|300845496|gb|EFK73256.1| glutamine ABC transporter permease protein [Escherichia coli MS 78-1] gi|301075539|gb|EFK90345.1| glutamine ABC transporter permease protein [Escherichia coli MS 146-1] gi|305853550|gb|EFM53989.1| glutamine ABC transporter permease protein [Escherichia coli NC101] gi|306906420|gb|EFN36934.1| polar amino acid ABC transporter, inner membrane subunit [Escherichia coli W] gi|307552655|gb|ADN45430.1| glutamine transport system permease protein [Escherichia coli ABU 83972] gi|307627780|gb|ADN72084.1| glutamine ABC transporter permease protein [Escherichia coli UM146] gi|308118370|gb|EFO55632.1| glutamine ABC transporter permease protein [Escherichia coli MS 145-7] gi|308925586|gb|EFP71070.1| glutamine transport system permease protein glnP [Shigella dysenteriae 1617] gi|309701088|emb|CBJ00386.1| glutamine ABC transporter, permease protein [Escherichia coli ETEC H10407] gi|310336648|gb|EFQ01815.1| glutamine transport system permease protein glnP [Escherichia coli 1827-70] gi|312286568|gb|EFR14481.1| glutamine transport system permease protein glnP [Escherichia coli 2362-75] gi|312945328|gb|ADR26155.1| glutamine ABC transporter permease protein [Escherichia coli O83:H1 str. NRG 857C] gi|313650289|gb|EFS14701.1| glutamine transport system permease protein glnP [Shigella flexneri 2a str. 2457T] gi|315060046|gb|ADT74373.1| glutamine transporter subunit [Escherichia coli W] gi|315135460|dbj|BAJ42619.1| glutamine transport system permease protein glnP [Escherichia coli DH1] gi|315257799|gb|EFU37767.1| glutamine ABC transporter permease protein [Escherichia coli MS 85-1] gi|315287229|gb|EFU46641.1| glutamine ABC transporter permease protein [Escherichia coli MS 110-3] gi|315292587|gb|EFU51939.1| glutamine ABC transporter permease protein [Escherichia coli MS 153-1] gi|315299324|gb|EFU58576.1| glutamine ABC transporter permease protein [Escherichia coli MS 16-3] gi|315619814|gb|EFV00333.1| glutamine transport system permease protein glnP [Escherichia coli 3431] gi|320177301|gb|EFW52305.1| Glutamate transport membrane-spanning protein [Shigella dysenteriae CDC 74-1112] gi|320183305|gb|EFW58160.1| Glutamate transport membrane-spanning protein [Shigella flexneri CDC 796-83] gi|320192713|gb|EFW67354.1| Glutamate transport membrane-spanning protein [Escherichia coli O157:H7 str. EC1212] gi|320196694|gb|EFW71317.1| Glutamate transport membrane-spanning protein [Escherichia coli WV_060327] gi|320198999|gb|EFW73596.1| Glutamate transport membrane-spanning protein [Escherichia coli EC4100B] gi|320637673|gb|EFX07465.1| glutamine ABC transporter permease protein [Escherichia coli O157:H7 str. G5101] gi|320642799|gb|EFX12000.1| glutamine ABC transporter permease protein [Escherichia coli O157:H- str. 493-89] gi|320648255|gb|EFX16910.1| glutamine ABC transporter permease protein [Escherichia coli O157:H- str. H 2687] gi|320654092|gb|EFX22160.1| glutamine ABC transporter permease protein [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320659715|gb|EFX27271.1| glutamine ABC transporter permease protein [Escherichia coli O55:H7 str. USDA 5905] gi|320664186|gb|EFX31337.1| glutamine ABC transporter permease protein [Escherichia coli O157:H7 str. LSU-61] gi|323159629|gb|EFZ45608.1| glutamine transport system permease protein glnP [Escherichia coli E128010] gi|323185034|gb|EFZ70400.1| glutamine transport system permease protein glnP [Escherichia coli 1357] gi|323190938|gb|EFZ76205.1| glutamine transport system permease protein glnP [Escherichia coli RN587/1] gi|323379395|gb|ADX51663.1| polar amino acid ABC transporter, inner membrane subunit [Escherichia coli KO11] gi|323938165|gb|EGB34425.1| His/Glu/Gln/Arg/opine family protein amino ABC transporter [Escherichia coli E1520] gi|323942683|gb|EGB38848.1| His/Glu/Gln/Arg/opine family protein amino ABC transporter [Escherichia coli E482] gi|323947104|gb|EGB43116.1| His/Glu/Gln/Arg/opine family protein amino ABC transporter [Escherichia coli H120] gi|323953527|gb|EGB49393.1| His/Glu/Gln/Arg/opine family protein amino ABC transporter [Escherichia coli H252] gi|323958099|gb|EGB53808.1| His/Glu/Gln/Arg/opine family protein amino ABC transporter [Escherichia coli H263] gi|323963057|gb|EGB58628.1| His/Glu/Gln/Arg/opine family protein amino ABC transporter [Escherichia coli H489] gi|323967412|gb|EGB62833.1| His/Glu/Gln/Arg/opine family protein amino ABC transporter [Escherichia coli M863] gi|323971976|gb|EGB67197.1| His/Glu/Gln/Arg/opine family protein amino ABC transporter [Escherichia coli TA007] gi|323976804|gb|EGB71892.1| His/Glu/Gln/Arg/opine family protein amino ABC transporter [Escherichia coli TW10509] gi|324009667|gb|EGB78886.1| glutamine ABC transporter permease protein [Escherichia coli MS 57-2] gi|324013099|gb|EGB82318.1| glutamine ABC transporter permease protein [Escherichia coli MS 60-1] gi|324018515|gb|EGB87734.1| glutamine ABC transporter permease protein [Escherichia coli MS 117-3] gi|324116234|gb|EGC10156.1| His/Glu/Gln/Arg/opine family protein amino ABC transporter [Escherichia coli E1167] gi|326338302|gb|EGD62131.1| Glutamate transport membrane-spanning protein [Escherichia coli O157:H7 str. 1125] gi|326346280|gb|EGD70018.1| Glutamate transport membrane-spanning protein [Escherichia coli O157:H7 str. 1044] gi|327253597|gb|EGE65226.1| glutamine transport system permease protein glnP [Escherichia coli STEC_7v] gi|330910554|gb|EGH39064.1| glutamate transport membrane-spanning protein [Escherichia coli AA86] gi|331038124|gb|EGI10344.1| glutamine transport system permease protein GlnP [Escherichia coli H736] gi|331044781|gb|EGI16908.1| glutamine transport system permease protein GlnP [Escherichia coli M605] gi|331050097|gb|EGI22155.1| glutamine transport system permease protein GlnP [Escherichia coli M718] gi|331055079|gb|EGI27088.1| glutamine transport system permease protein GlnP [Escherichia coli TA206] gi|331060589|gb|EGI32553.1| glutamine transport system permease protein GlnP [Escherichia coli TA143] gi|331065535|gb|EGI37428.1| glutamine transport system permease protein GlnP [Escherichia coli TA271] gi|331070511|gb|EGI41875.1| glutamine transport system permease protein GlnP [Escherichia coli TA280] gi|331075237|gb|EGI46535.1| glutamine transport system permease protein GlnP [Escherichia coli H591] gi|331079948|gb|EGI51127.1| glutamine transport system permease protein GlnP [Escherichia coli H299] gi|332097551|gb|EGJ02531.1| glutamine transport system permease protein glnP [Shigella boydii 3594-74] gi|332104698|gb|EGJ08044.1| glutamine transporter GlnP [Shigella sp. D9] Length = 219 Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 58/198 (29%), Positives = 108/198 (54%), Gaps = 12/198 (6%) Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256 G+V+ L A +R F + L++I +I G P +V + Y F P+ FN Sbjct: 33 GLVIGLLAG-FARTFGGWIANHVALVFIE--VIRGTPIVVQVMFIY---FALPM--AFND 84 Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316 + + P F + + + + A+IAEI R ++++ +G EA +ALGL+ + R V+L Sbjct: 85 L---RIDP-FTAAVVTIMINSGAYIAEITRGAVLSIHKGFREAGLALGLSRWETIRYVIL 140 Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376 P A+R ++PPL +Q++ +K++SL + +G A+L G II +A+EI YL Sbjct: 141 PLALRRMLPPLGNQWIISIKDTSLFIVIGVAELTRQGQEIIAGNFRALEIWSAVAVFYLI 200 Query: 377 LSIMIALFMNRLNAKIAL 394 ++++++ + RL ++ + Sbjct: 201 ITLVLSFILRRLERRMKI 218 >gi|329922367|ref|ZP_08278044.1| ABC transporter, permease protein [Paenibacillus sp. HGF5] gi|328942230|gb|EGG38501.1| ABC transporter, permease protein [Paenibacillus sp. HGF5] Length = 480 Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 60/208 (28%), Positives = 111/208 (53%), Gaps = 18/208 (8%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 +F F+LG++++L R K K L YI +I G P LV + + +H+ Sbjct: 291 LFGFILGLIIALM-----RMSGVKILKFLATAYIE--IIRGTPMLVQL---FIIHYS--- 337 Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 L F+ SP S + LS +AA++AEI R+G+ V RGQ+EAA +LG+T KA Sbjct: 338 LAAFDI----KFSP-IQSGILTLSINSAAYLAEIFRAGIQGVDRGQLEAARSLGMTKGKA 392 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370 R ++LPQA++ ++P + ++++ ++K SS+ +G D++ + T + +L+ Sbjct: 393 MRHIILPQALKGVLPAIGNEFVVIIKESSIVSFIGVFDIMYQAQILRGSTFAPLNPLLVA 452 Query: 371 MFIYLSLSIMIALFMNRLNAKIALKEKK 398 IY L+ +++ + K++ + + Sbjct: 453 AMIYFILTFVLSKLLGVWERKLSASDNR 480 >gi|326792535|ref|YP_004310356.1| polar amino acid ABC transporter inner membrane protein [Clostridium lentocellum DSM 5427] gi|326543299|gb|ADZ85158.1| polar amino acid ABC transporter, inner membrane subunit [Clostridium lentocellum DSM 5427] Length = 246 Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 45/166 (27%), Positives = 94/166 (56%), Gaps = 12/166 (7%) Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286 ++I G P+++ I L + + F + + ++GG IA + A++AE++R Sbjct: 89 YIIRGTPSVLQIVLMWNVVFANATIDRI-WVGG-----------IAFGINSGAYMAELIR 136 Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346 +G+ + +GQMEA +LGL + + R V+LPQA ++P S+++ L+K +++ +G Sbjct: 137 AGIQGIDKGQMEAGRSLGLGYGQTMRHVILPQAFIQMLPAFVSEFIILIKETAIIGFIGG 196 Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 DL+ I+++T A++ +LI Y ++ ++ +FM ++ K+ Sbjct: 197 LDLMKAQDIIMSRTFNALQPLLIVGVCYFIITSLLTVFMRQIEKKV 242 >gi|206577408|ref|YP_002239112.1| amino acid ABC transporter, permease protein [Klebsiella pneumoniae 342] gi|288936013|ref|YP_003440072.1| polar amino acid ABC transporter inner membrane subunit [Klebsiella variicola At-22] gi|290512818|ref|ZP_06552183.1| amino acid ABC transporter [Klebsiella sp. 1_1_55] gi|206566466|gb|ACI08242.1| amino acid ABC transporter, permease protein [Klebsiella pneumoniae 342] gi|288890722|gb|ADC59040.1| polar amino acid ABC transporter, inner membrane subunit [Klebsiella variicola At-22] gi|289774701|gb|EFD82704.1| amino acid ABC transporter [Klebsiella sp. 1_1_55] Length = 241 Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 56/185 (30%), Positives = 96/185 (51%), Gaps = 13/185 (7%) Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273 + GK L Y+ +L G P L +Q+ F VL F + F +AL Sbjct: 49 RAGKGLAFFYL--WLFRGTPVL------FQIIFVYNVLPGFGLRFSA-----FTCAVLAL 95 Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333 S A++AEI+RSGL AV GQ A +ALG+TH + R ++LPQA R ++PP+ +Q ++ Sbjct: 96 SLNEGAYMAEILRSGLQAVKSGQRTAGMALGMTHGQIMRKIVLPQAARIVLPPMGNQMIS 155 Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393 +LK+S+L + +L+ V + + + E + YL L+ + +F + L + Sbjct: 156 MLKSSALVSVIAVQELLLVANQAASASFRYFEALCAAGIYYLLLTSLFMIFQSWLERVLD 215 Query: 394 LKEKK 398 ++++ Sbjct: 216 PRQRR 220 >gi|148653869|ref|YP_001280962.1| polar amino acid ABC transporter inner membrane subunit [Psychrobacter sp. PRwf-1] gi|148572953|gb|ABQ95012.1| polar amino acid ABC transporter, inner membrane subunit [Psychrobacter sp. PRwf-1] Length = 241 Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 58/181 (32%), Positives = 91/181 (50%), Gaps = 13/181 (7%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV-----SPEFMSLYI 271 + LP LYI F G P LV I L Y L QF FI S + F I Sbjct: 52 QVLPFLYI--FFFRGTPLLVQIFLIYY------GLSQFEFIKDSALWEPVLKQPFWCAII 103 Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 A + T+A+ AEI+R + ++P G++EAA A+G++ + + LP+A ++P +++ Sbjct: 104 AFTLNTSAYTAEIIRGAIQSIPPGELEAADAIGMSRWQKLTRITLPRAFGIMLPAYSNEV 163 Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 + +LK SSLA+ + D+ + TI +T E+ IYL LS +I L L + Sbjct: 164 IFMLKGSSLAMTIALMDITGIAKTISARTYTIFELYFAAGLIYLVLSWVILLTFRFLEKR 223 Query: 392 I 392 + Sbjct: 224 M 224 >gi|332179315|gb|AEE15004.1| polar amino acid ABC transporter, inner membrane subunit [Thermodesulfobium narugense DSM 14796] Length = 225 Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 40/89 (44%), Positives = 58/89 (65%) Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321 V P F I + Y A+IAE+VR+G+ A+ RGQ+EAA + G T +A R ++LPQA Sbjct: 91 VLPVFAVGVIGVGVYHGAYIAEVVRAGIQAIHRGQLEAAYSQGFTFWQAMRYIILPQAKI 150 Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 I PPLT+Q ++L+KN+S+ V DL+ Sbjct: 151 IIFPPLTNQAVSLIKNTSVMAMVAGGDLM 179 >gi|325125966|gb|ADY85296.1| Glutamine ABC transporter permease protein [Lactobacillus delbrueckii subsp. bulgaricus 2038] Length = 493 Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 42/131 (32%), Positives = 75/131 (57%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P + IA+ + A++AE +RSG+ +V +GQ EAA +LGL+ K R V+ PQA+++I Sbjct: 358 PALAAGIIAIGLNSGAYVAEDIRSGINSVAKGQTEAARSLGLSQAKTYRYVVFPQALKNI 417 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 P L ++++ L K+SSL +G +L+ G + T + + + I M IY ++ + Sbjct: 418 WPALGNEFITLTKDSSLVSVIGVGELMYETGLVQTATYRGVMPLFITMCIYFVVTFIFTR 477 Query: 384 FMNRLNAKIAL 394 +N ++ L Sbjct: 478 LLNYFERRMNL 488 Score = 37.4 bits (85), Expect = 3.7, Method: Compositional matrix adjust. Identities = 28/106 (26%), Positives = 43/106 (40%), Gaps = 1/106 (0%) Query: 44 CVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSG 103 +N NN +K +L ++ A S S YA+ G T + Sbjct: 243 AINKTINNCQKQDL-FNKKYIPAAAKAMKQASSKTNNSMSKYASYFATGLGYTMIITICS 301 Query: 104 MIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 + ++G + RLS NKL+ I Y+E R P +V I F+Y Sbjct: 302 ITIGLVLGVIFALMRLSKNKLLHAIAVCYIEFLRGTPQMVQIMFVY 347 >gi|317402648|gb|EFV83206.1| amino acids ABC transporter [Achromobacter xylosoxidans C54] Length = 238 Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 56/175 (32%), Positives = 92/175 (52%), Gaps = 22/175 (12%) Query: 227 FLIFGLPTLVLIALKY---QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283 +L+ LP L+ I Y L +PV G + +AL CY +A++AE Sbjct: 66 YLVRSLPLLMFIFWAYFFVPLIIGRPVAGTTTMV-------------VALVCYESAYLAE 112 Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343 I+R+G+ A+P GQ EA ALGL++ + R V+LPQA+ +++P + SQ+++ +K +SLA Sbjct: 113 IIRAGIQALPPGQQEAGRALGLSYMQTMRRVILPQALYNMLPSMLSQFVSTVKETSLAYV 172 Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 + +L NQ + +F L+L+ I F L+A + L EK+ Sbjct: 173 ISVQELTYAA----NQINSVLLTKPFEVFALLALTYFILNF--GLSALVHLTEKR 221 >gi|194433177|ref|ZP_03065459.1| glutamine ABC transporter, permease protein [Shigella dysenteriae 1012] gi|194418674|gb|EDX34761.1| glutamine ABC transporter, permease protein [Shigella dysenteriae 1012] gi|332091105|gb|EGI96195.1| glutamine transport system permease protein glnP [Shigella dysenteriae 155-74] Length = 219 Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 58/198 (29%), Positives = 108/198 (54%), Gaps = 12/198 (6%) Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256 G+V+ L A +R F + L++I +I G P +V + Y F P+ FN Sbjct: 33 GLVIGLLAG-FARAFGGWIANHVALVFIE--VIRGTPIVVQVMFIY---FALPM--AFND 84 Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316 + + P F + + + + A+IAEI R ++++ +G EA +ALGL+ + R V+L Sbjct: 85 L---RIDP-FTAAVVTIMINSGAYIAEITRGAVLSIHKGFREAGLALGLSRWETIRYVIL 140 Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376 P A+R ++PPL +Q++ +K++SL + +G A+L G II +A+EI YL Sbjct: 141 PLALRRMLPPLGNQWIISIKDTSLFIVIGVAELTRQGQEIIAGNFRALEIWSAVAVFYLI 200 Query: 377 LSIMIALFMNRLNAKIAL 394 ++++++ + RL ++ + Sbjct: 201 ITLVLSFILRRLERRMKI 218 >gi|171462944|ref|YP_001797057.1| polar amino acid ABC transporter, inner membrane subunit [Polynucleobacter necessarius subsp. necessarius STIR1] gi|171192482|gb|ACB43443.1| polar amino acid ABC transporter, inner membrane subunit [Polynucleobacter necessarius subsp. necessarius STIR1] Length = 158 Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 44/124 (35%), Positives = 72/124 (58%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I + AAF +EIVR+G+ +VP+GQ+ A ALG+T+ + RLV LPQA R++IP +Q Sbjct: 33 ITFIAFEAAFFSEIVRAGIQSVPKGQIYAGEALGMTYGQNMRLVFLPQAFRNVIPVFMTQ 92 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 + L +N+SL A+G DL+ G+ IE ++ Y + ++ + + A Sbjct: 93 TIILFQNTSLVYAIGAYDLLKGFEIAGKNYGRPIETYILAAATYFIICFSLSKAVRAIQA 152 Query: 391 KIAL 394 K+A+ Sbjct: 153 KVAI 156 >gi|54023858|ref|YP_118100.1| putative ABC transporter permease [Nocardia farcinica IFM 10152] gi|54015366|dbj|BAD56736.1| putative ABC transporter permease [Nocardia farcinica IFM 10152] Length = 308 Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 68/225 (30%), Positives = 111/225 (49%), Gaps = 24/225 (10%) Query: 167 FGMFL-NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL--- 222 +G +L + R LS +T++ + VLG VL++ RLS + P+L Sbjct: 55 YGRYLFDTRILSGALVTLELTVLAMAIAIVLGTVLAVM--RLSPN---------PVLRST 103 Query: 223 -YISTFLIFGLPTLVLI-------ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALS 274 ++ ++ G P V + +L Q+ P QF + + F I L Sbjct: 104 AWVYLWIFRGTPVFVQLVFWGLFPSLYRQIDLGVPFGPQFFHLDVQGLQAAFAFAVIGLG 163 Query: 275 CYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNL 334 AA++AEIVR+G+ +V GQ EA+IALG++ + R +LPQAMR IIPP ++ + + Sbjct: 164 LNEAAYMAEIVRAGINSVGEGQREASIALGMSWAQTMRRTVLPQAMRVIIPPTGNELIGM 223 Query: 335 LKNSSLAVAVGFA-DLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378 LK +SL A+ + DL I Q I ++L+ YL+++ Sbjct: 224 LKTTSLVTAIPLSTDLYGRARDIYGVNFQPIPLLLVTATWYLAIT 268 >gi|227355081|ref|ZP_03839492.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Proteus mirabilis ATCC 29906] gi|227164868|gb|EEI49715.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Proteus mirabilis ATCC 29906] Length = 249 Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 41/136 (30%), Positives = 80/136 (58%), Gaps = 1/136 (0%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 PE ++ AL+ T+++IA V++G++A+ +GQ +A ++LG + ++LPQA+R + Sbjct: 94 PEITTVICALALITSSYIAHGVKAGILAIGKGQWQAGLSLGFNRWQTLWYIVLPQALRMM 153 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG-QAIEIILIWMFIYLSLSIMIA 382 +P +Q++ L+K++SLA VG +L + + N++ +E+ L FIY L + Sbjct: 154 VPSFINQWIALIKDTSLAYVVGVGELSFLATQVNNRSMVYPMEVFLFVAFIYFVLCFSLE 213 Query: 383 LFMNRLNAKIALKEKK 398 L NR+ +++K Sbjct: 214 LIANRVGKLFTPQKEK 229 >gi|86360897|ref|YP_472784.1| amino acid ABC transporter permease [Rhizobium etli CFN 42] gi|86284999|gb|ABC94057.1| probable amino acid ABC transporter, permease protein [Rhizobium etli CFN 42] Length = 220 Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 50/180 (27%), Positives = 91/180 (50%), Gaps = 24/180 (13%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 + LP+L + F F LP + L DK S + LS Y Sbjct: 65 RNLPILVLVLFAFFALP-------QMGLRLDK-----------------MKSFVLVLSLY 100 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 + A++AE+ R+GL+++PRG EA +A+GLT + ++ P +R+++P L+S ++L K Sbjct: 101 SGAYLAEVFRAGLLSIPRGLTEAGLAIGLTAMQIRSSIIAPLMLRNVLPSLSSTIISLFK 160 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 ++SLA A+ +L I ++ + IE ++ +Y++ +IA M + ++AL Sbjct: 161 DTSLAAAIAVPELTFAARKINVESFRVIETWMVTSALYVATCFLIAALMRLVERRLALPR 220 >gi|66045741|ref|YP_235582.1| amino acid ABC transporter permease [Pseudomonas syringae pv. syringae B728a] gi|63256448|gb|AAY37544.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Pseudomonas syringae pv. syringae B728a] Length = 220 Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 44/129 (34%), Positives = 74/129 (57%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + I L+ + + ++EIVR L A+PRGQ+EA A+GL ++ R VLLPQAMR I+P Sbjct: 91 FQAGAIGLTLFCGSHVSEIVRGALQAIPRGQLEAGKAIGLRFGQSLRYVLLPQAMRQILP 150 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 + ++K S+L +G A+L+ +I +T +E L F++ ++ I L Sbjct: 151 TWVNSSTEIVKASTLLSVIGVAELLLSTQQVIARTFMTLEFYLFAGFLFFLINYAIELLG 210 Query: 386 NRLNAKIAL 394 ++ ++AL Sbjct: 211 RQIEKRVAL 219 >gi|172056977|ref|YP_001813437.1| polar amino acid ABC transporter, inner membrane subunit [Exiguobacterium sibiricum 255-15] gi|171989498|gb|ACB60420.1| polar amino acid ABC transporter, inner membrane subunit [Exiguobacterium sibiricum 255-15] Length = 218 Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 50/159 (31%), Positives = 87/159 (54%), Gaps = 10/159 (6%) Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290 G P ++ +A+ +HF P L + V+ + S IA S + A+I+EI+R+G+ Sbjct: 63 GTPLILQLAI---IHFGLPQLTGY-------VTTGYQSAIIAFSLNSGAYISEIIRAGIQ 112 Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 AV RGQ EAA ALG+ + K R ++LPQA ++I+P + ++ + L K S+L VG D++ Sbjct: 113 AVDRGQWEAADALGIPYMKQLRSIILPQAFKNILPAIMNELITLTKESALISTVGVLDVM 172 Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 + + E +L F+Y L + ++L ++ Sbjct: 173 RRAQVVGGEKALYFEPLLFAGFVYFVLVMGLSLIGQQVE 211 >gi|294786680|ref|ZP_06751934.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Parascardovia denticolens F0305] gi|315226290|ref|ZP_07868078.1| amino acid ABC superfamily ATP binding cassette transporter, permease protein [Parascardovia denticolens DSM 10105] gi|294485513|gb|EFG33147.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Parascardovia denticolens F0305] gi|315120422|gb|EFT83554.1| amino acid ABC superfamily ATP binding cassette transporter, permease protein [Parascardovia denticolens DSM 10105] Length = 324 Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 45/121 (37%), Positives = 78/121 (64%), Gaps = 4/121 (3%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + L+ AA+++EIVR+GL +V GQ EA+ ALG++ + R ++LPQAMR I+PP++++ Sbjct: 170 VGLALNEAAYLSEIVRAGLESVDPGQREASQALGMSRGQIMRRIVLPQAMRIIVPPMSNE 229 Query: 331 YLNLLKNSSLAVAVGFA-DLVSVGGTIINQTGQAIEIIL---IWMFIYLSLSIMIALFMN 386 + LLK +SL +AV F +L V +I N+ + I ++L IW + S+ ++ ++ Sbjct: 230 AIGLLKTTSLVLAVPFTMELQFVTNSIANRIYKPIPLLLVAAIWYLVITSILMVGQTYLE 289 Query: 387 R 387 R Sbjct: 290 R 290 >gi|282165413|ref|YP_003357798.1| putative amino acid ABC transporter permease protein [Methanocella paludicola SANAE] gi|282157727|dbj|BAI62815.1| putative amino acid ABC transporter permease protein [Methanocella paludicola SANAE] Length = 442 Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 56/203 (27%), Positives = 104/203 (51%), Gaps = 17/203 (8%) Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFN 255 LG V + F R + + + LP+L F+ FGLP L+ GQFN Sbjct: 240 LGRVSTNFLFRAVASIYVEGIRGLPILLQLLFVNFGLPFLI----------SDLTGGQFN 289 Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315 G F + IALS + A++ EI + G+ AV +GQMEAA +LGL++ ++ ++ Sbjct: 290 IDG-------FTACVIALSINSGAYMGEIFKGGIEAVHKGQMEAARSLGLSYNQSMLFII 342 Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375 LPQA + ++P L ++++ L+K+SS+ + + ++V +I + +L +YL Sbjct: 343 LPQAFKIVLPTLGNEFIALIKDSSIGMVISVMEVVWWSKSIGAEYYNTFTPLLAAGMVYL 402 Query: 376 SLSIMIALFMNRLNAKIALKEKK 398 ++I + + + K +++ + Sbjct: 403 CITIPLGRAVQYIEKKYSVQNTR 425 >gi|172063474|ref|YP_001811125.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria MC40-6] gi|171995991|gb|ACB66909.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria MC40-6] Length = 500 Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 58/183 (31%), Positives = 95/183 (51%), Gaps = 10/183 (5%) Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252 +++LG++L F L+R H K +YI F LP LVL+ Y L Sbjct: 31 AWLLGVLLG-FPVALARQSHRPLLKRAAAVYIWFFR--SLPLLVLLVFIYNL-------P 80 Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312 Q + +S F + IA+ A+ AEI R G+++VPRGQ+EA ALG+ R Sbjct: 81 QVFPATSAVLSDPFTAGLIAMVLSETAYFAEIHRGGILSVPRGQLEAGRALGIRFAGIQR 140 Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372 L+++PQA+R +P L ++++ ++K +SL + A+++ VG + Q E +L F Sbjct: 141 LIVMPQAIRIALPALANEFITIVKLTSLVSVISLAEILLVGQRLYTQNFLVFETMLAVAF 200 Query: 373 IYL 375 Y+ Sbjct: 201 YYV 203 >gi|330971238|gb|EGH71304.1| amino acid ABC transporter permease [Pseudomonas syringae pv. aceris str. M302273PT] Length = 220 Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 44/129 (34%), Positives = 74/129 (57%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + I L+ + + ++EIVR L A+PRGQ+EA A+GL ++ R VLLPQAMR I+P Sbjct: 91 FQAGAIGLTLFCGSHVSEIVRGALQAIPRGQLEAGKAIGLRFGQSLRYVLLPQAMRQILP 150 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 + ++K S+L +G A+L+ +I +T +E L F++ ++ I L Sbjct: 151 AWVNSSTEIVKASTLLSVIGVAELLLSTQQVIARTFMTLEFYLFAGFLFFLINYAIELLG 210 Query: 386 NRLNAKIAL 394 ++ ++AL Sbjct: 211 RQIEKRVAL 219 >gi|310827296|ref|YP_003959653.1| hypothetical protein ELI_1704 [Eubacterium limosum KIST612] gi|308739030|gb|ADO36690.1| hypothetical protein ELI_1704 [Eubacterium limosum KIST612] Length = 221 Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 56/218 (25%), Positives = 116/218 (53%), Gaps = 12/218 (5%) Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240 +T++ +F + G+V++L R+S++ K L YI F G P L+ + Sbjct: 16 VTLEIAVVAIIFGAIFGVVIAL--GRISKN---KIFNGLSWFYIWFFR--GTPLLLQL-- 66 Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300 + + + P++ + G + + +I S + A++AEI+R+ + ++ GQMEAA Sbjct: 67 -FIIFYAVPIV-YLDMTGATFEIDPMICAFITFSLNSTAYLAEIIRAAIESIDHGQMEAA 124 Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 ALG+++++A +++PQ + ++ P+ ++ + LLK++SL + DL+ T+ + T Sbjct: 125 KALGMSYKQAMGKIIIPQTFKRLVAPVGNELIMLLKDTSLVSTIALFDLLRTVKTMASAT 184 Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 G + I IYL L+ ++ + ++L K+ EK+ Sbjct: 185 GSWVYYIYA-AVIYLFLTTILQVVFDKLENKLGAYEKR 221 >gi|296156610|ref|ZP_06839448.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. Ch1-1] gi|295893209|gb|EFG72989.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. Ch1-1] Length = 331 Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 56/184 (30%), Positives = 95/184 (51%), Gaps = 10/184 (5%) Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV-------LIALKYQLH 245 S +G++L + A L R A LYI ++ G P LV L AL Q+ Sbjct: 91 SMAIGMILGVIAA-LMRQSSNPIVSAFAALYI--WIFRGTPLLVQLIFWYNLAALYPQID 147 Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305 P + +++ ++ + L A++AEIVRSGL++V GQ EAA +LGL Sbjct: 148 LGLPFFAPIASLQTNSIVTPIVAALLGLGLNEGAYMAEIVRSGLLSVDPGQREAAYSLGL 207 Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365 + + R ++LPQA+R I+PP ++ + +LK +SL + DL+ I ++T + I Sbjct: 208 SPARTIRRIILPQALRVIVPPTGNEIVGMLKATSLVSTLAIGDLLYSAQGIYSRTFETIP 267 Query: 366 IILI 369 ++++ Sbjct: 268 LLIV 271 Score = 36.6 bits (83), Expect = 7.4, Method: Compositional matrix adjust. Identities = 27/79 (34%), Positives = 40/79 (50%), Gaps = 3/79 (3%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 IL GF+ T L + M I+G + R S+N +V+ +Y+ +FR P LV + F Sbjct: 77 ILTGFLWTLGLTAASMAIGMILGVIAALMRQSSNPIVSAFAALYIWIFRGTPLLVQLIFW 136 Query: 149 YKSVLSVLPIPDHSIVLPF 167 Y L+ L P + LPF Sbjct: 137 YN--LAAL-YPQIDLGLPF 152 >gi|148974815|ref|ZP_01811795.1| amino acid ABC transporter, permease protein [Vibrionales bacterium SWAT-3] gi|145965324|gb|EDK30573.1| amino acid ABC transporter, permease protein [Vibrionales bacterium SWAT-3] Length = 292 Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 49/160 (30%), Positives = 87/160 (54%), Gaps = 1/160 (0%) Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291 +P L L L + + D L F F G + + S I + ++A+IAE++R+GL + Sbjct: 127 IPLLGLETLLREHNGDINQLQAFLF-GPANLWENLASGVICIGLLSSAYIAEVIRAGLES 185 Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 +P+GQ EAA +LGL+ R V+ PQ + +I PPL Q ++L+K++S+ + ++ Sbjct: 186 IPKGQWEAADSLGLSVFSKYRYVVGPQVLTAITPPLAGQAISLVKDTSIVSLISIQEMTF 245 Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 VG + N +G EI LI +Y +L ++ ++ + Sbjct: 246 VGTEMANSSGLIFEIWLIVGAVYFALCFTLSRIFRKIEQR 285 >gi|300313149|ref|YP_003777241.1| glutamate/aspartate ABC transporter permease [Herbaspirillum seropedicae SmR1] gi|300075934|gb|ADJ65333.1| ABC-type glutamate/aspartate transport system, permease component protein [Herbaspirillum seropedicae SmR1] Length = 231 Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 55/180 (30%), Positives = 96/180 (53%), Gaps = 8/180 (4%) Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP----EFMSLYIALSC 275 PL +I+T + + ++ L+ + + +F P +G + IG S P F S I Sbjct: 53 PLSFIATTYVNLIRSIPLVLVIFWFYFLVPFIGAW-MIGAS--EPIQVGAFQSALITFIL 109 Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335 + AA+ EI+RSG+ ++PRGQ+ A A+G+ + + V+LPQA R++ P L +Q + L Sbjct: 110 FEAAYYCEIMRSGIQSIPRGQVFAGYAIGMNYWQMMGNVVLPQAFRNMTPILLTQTIVLF 169 Query: 336 KNSSLAVAVG-FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394 ++ SL +G D V+ I + G+ +E+ L +Y LS ++ + R KIA+ Sbjct: 170 QDVSLVYVLGSVPDFVTSASKIAQRDGRLVEMYLFVAVVYFVLSFGLSTLVKRFQKKIAI 229 Score = 44.7 bits (104), Expect = 0.025, Method: Compositional matrix adjust. Identities = 23/51 (45%), Positives = 34/51 (66%) Query: 99 LAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 L FS M I+GTL+ RLS+NK +++I YV + R+IP ++VIF+ Y Sbjct: 28 LTFSAMAGGIILGTLLAMMRLSSNKPLSFIATTYVNLIRSIPLVLVIFWFY 78 >gi|145298732|ref|YP_001141573.1| ABC-type amino acid transporter, permease protein [Aeromonas salmonicida subsp. salmonicida A449] gi|142851504|gb|ABO89825.1| ABC-type amino acid transporter, permease protein [Aeromonas salmonicida subsp. salmonicida A449] Length = 265 Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 38/90 (42%), Positives = 62/90 (68%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 ++LS Y AF AE++R+G+ A+P GQ EAA +LGL+ R V+LPQ +R ++PPLT++ Sbjct: 137 LSLSLYQGAFTAEVLRAGIQAIPSGQWEAARSLGLSRAITLRKVILPQLVRIVLPPLTNE 196 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 ++L+K+S+L + DL + G T++ T Sbjct: 197 LVSLIKHSALVSVIAIFDLTNEGRTLVADT 226 >gi|330962037|gb|EGH62297.1| amino acid ABC transporter permease [Pseudomonas syringae pv. maculicola str. ES4326] Length = 222 Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 65/198 (32%), Positives = 102/198 (51%), Gaps = 18/198 (9%) Query: 195 VLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQF 254 VLG L+L RLSR K L +Y+S F G P LV + L Y + P LG Sbjct: 36 VLGFGLALM--RLSRF---KPLNWLARIYVSFFR--GTPLLVQLFLIY---YGLPELG-- 83 Query: 255 NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLV 314 + P +L I S AA+ EI+RS + ++ RGQ EAA ++G+T + R Sbjct: 84 -----IELDPLTAAL-IGFSLNMAAYACEILRSAISSIERGQWEAAASIGMTRWQTLRRA 137 Query: 315 LLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374 +LPQA R+ +PPL + +++L+K+++LA + +L I +T + + L IY Sbjct: 138 ILPQAARTALPPLGNSFISLVKDTALAATIQVPELFRQAQLITARTFEIFTMYLAAALIY 197 Query: 375 LSLSIMIALFMNRLNAKI 392 L+ ++ NRL A++ Sbjct: 198 WILATALSYLQNRLEARV 215 Score = 40.0 bits (92), Expect = 0.58, Method: Compositional matrix adjust. Identities = 22/61 (36%), Positives = 33/61 (54%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G T +L+ GM ++G + RLS K + W+ R+YV FR P LV +F + Sbjct: 16 LLKGAYYTVFLSLGGMFCGLVLGFGLALMRLSRFKPLNWLARIYVSFFRGTPLLVQLFLI 75 Query: 149 Y 149 Y Sbjct: 76 Y 76 >gi|297243838|ref|ZP_06927768.1| ABC-type amino acid transporter, permease component [Gardnerella vaginalis AMD] gi|296888259|gb|EFH27001.1| ABC-type amino acid transporter, permease component [Gardnerella vaginalis AMD] Length = 337 Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 50/143 (34%), Positives = 82/143 (57%), Gaps = 4/143 (2%) Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312 +F I + + + + LS +A+++EIVR+GL AV GQ+EAA ALG+ R Sbjct: 150 EFWSIDSNVIMTSLTAAVVGLSLNESAYLSEIVRAGLEAVDSGQVEAAKALGMGRALTMR 209 Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA-DLVSVGGTIINQTGQAIEIIL--- 368 ++LPQAMR I+PPL ++ + +LK +SL +AV F +L I N+ + I ++L Sbjct: 210 RIILPQAMRIIVPPLGNETIGMLKTTSLVLAVPFTLELQFATNAIANRIYKPIPLLLVAS 269 Query: 369 IWMFIYLSLSIMIALFMNRLNAK 391 IW I S+ +++ + + AK Sbjct: 270 IWYLIITSILMVLQYMLEKHFAK 292 >gi|327192285|gb|EGE59250.1| putative amino acid ABC transporter, permease protein [Rhizobium etli CNPAF512] Length = 220 Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 50/180 (27%), Positives = 91/180 (50%), Gaps = 24/180 (13%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 + LP+L + F F LP + L DK S + LS Y Sbjct: 65 RNLPILVLVLFAFFALP-------QMGLRLDK-----------------MKSFVLVLSLY 100 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 + A++AE+ R+GL+++PRG EA +A+GLT + ++ P +R+++P L+S ++L K Sbjct: 101 SGAYLAEVFRAGLLSIPRGLTEAGLAIGLTGMQIRSSIIAPLMLRNVLPSLSSTIISLFK 160 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 ++SLA A+ +L I ++ + IE ++ +Y++ +IA M + ++AL Sbjct: 161 DTSLAAAIAVPELTFAARKINVESFRVIETWMVTSALYVATCFLIAALMRLVERRLALPR 220 >gi|295697367|ref|YP_003590605.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus tusciae DSM 2912] gi|295412969|gb|ADG07461.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus tusciae DSM 2912] Length = 222 Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 60/161 (37%), Positives = 92/161 (57%), Gaps = 10/161 (6%) Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280 L YI+ F G P V I L LHF V+ FN GG + + +S IAL +AA+ Sbjct: 58 LAYITFFR--GTPLFVQILL---LHF--AVIPLFN--GGRALDAQ-ISGTIALLLNSAAY 107 Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340 +AEI R+G+ ++ RGQMEAA +LGL +A V+LPQA R ++PPL ++ + LLK+SSL Sbjct: 108 VAEIFRAGIQSIDRGQMEAARSLGLRAGQAMLYVILPQAFRRMLPPLGNEAIALLKDSSL 167 Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 + ++ + + + E L F+YL L++++ Sbjct: 168 LAVIAGGEIATQMNLMFGRILSPWEPFLTLAFVYLVLTLVL 208 >gi|254713632|ref|ZP_05175443.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family protein [Brucella ceti M644/93/1] gi|254716014|ref|ZP_05177825.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family protein [Brucella ceti M13/05/1] gi|261217781|ref|ZP_05932062.1| ABC transporter [Brucella ceti M13/05/1] gi|261321371|ref|ZP_05960568.1| ABC transporter [Brucella ceti M644/93/1] gi|260922870|gb|EEX89438.1| ABC transporter [Brucella ceti M13/05/1] gi|261294061|gb|EEX97557.1| ABC transporter [Brucella ceti M644/93/1] Length = 240 Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 49/168 (29%), Positives = 90/168 (53%), Gaps = 8/168 (4%) Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279 PL +IS+ + + I + Y + P +G PE + IAL+ + ++ Sbjct: 50 PLRWISSAYVEWFRNIPFIVVLYLFFYGLPFMG--------VRLPESIVGTIALAFFASS 101 Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339 + AEI+R ++AVP+GQMEAA A+G+++ + ++ PQ +R ++PP T+ ++++K +S Sbjct: 102 YFAEIIRGAILAVPKGQMEAARAIGMSYFQGLYEIVAPQTVRLLLPPSTNTSISMVKETS 161 Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387 + + A+L G I +T EI L IY ++ + A M+R Sbjct: 162 VLSTITMAELTYQGLVIQGETFAPFEIFLTTAAIYWMITAIFAYLMHR 209 >gi|51245412|ref|YP_065296.1| amino acid ABC transporter, permease protein [Desulfotalea psychrophila LSv54] gi|50876449|emb|CAG36289.1| probable amino acid ABC transporter, permease protein [Desulfotalea psychrophila LSv54] Length = 221 Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 62/212 (29%), Positives = 110/212 (51%), Gaps = 15/212 (7%) Query: 186 NAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH 245 AK+ FSF+L ++ L ++R+ ++L LL+ S ++ F T +LI L + ++ Sbjct: 23 TAKVVFFSFILAMLFGLIVG-VARY----RSRSLYLLF-SPYVEFFRGTPLLIQLFF-IY 75 Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305 + P +G F + + L A+I+EI+R L++V + Q+EA+ ALGL Sbjct: 76 YGLPTIG--------ISMDSFTAACLGLGLNGGAYISEIIRGSLLSVDQDQLEASYALGL 127 Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365 T ++ V+ PQA IPPL + + +LLK++SL + +L VG I +T +A E Sbjct: 128 TWFQSMVYVIFPQAFTVAIPPLVNSFSSLLKDTSLVSVLAITELTRVGQLIYTRTFRAFE 187 Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 I L +Y ++ ++ L L K ++ + Sbjct: 188 IYLAIGMLYFMMTFVMTLLSKYLEKKYKVQGR 219 >gi|320530705|ref|ZP_08031749.1| ABC transporter, permease protein [Selenomonas artemidis F0399] gi|320136992|gb|EFW28930.1| ABC transporter, permease protein [Selenomonas artemidis F0399] Length = 227 Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 42/128 (32%), Positives = 75/128 (58%), Gaps = 1/128 (0%) Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329 ++A AA+ AEI R+G+ AVPRGQ EAA LG+++ A R ++LPQ +R +PP+++ Sbjct: 101 FLAFVLNYAAYFAEIFRAGIQAVPRGQYEAARVLGMSYPLALRRIILPQVLRITLPPVSN 160 Query: 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 + +NL+K++SL + DL+ V TI+ + +++ F YL+++ +L Sbjct: 161 ETINLVKDTSLVYILAMNDLLRVARTIVQREFDMTPLVIAGAF-YLAMTAAFTWGFKKLE 219 Query: 390 AKIALKEK 397 A ++ Sbjct: 220 AHYGRYDR 227 >gi|302528609|ref|ZP_07280951.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Streptomyces sp. AA4] gi|302437504|gb|EFL09320.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Streptomyces sp. AA4] Length = 298 Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 60/176 (34%), Positives = 91/176 (51%), Gaps = 14/176 (7%) Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLI--- 238 T++ VLG+VL++ RLS + K LYI F G P V + Sbjct: 67 TIELTVLAMAIGIVLGVVLAVM--RLSAN---PAMKGFASLYIWFFR--GTPVFVQLLFW 119 Query: 239 ----ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294 AL +L P QF + + F++ + L A++AE+VR+G+++V R Sbjct: 120 GYASALYPRLGIGIPFGPQFVSAPTNVLITPFIAAILGLGLNEGAYMAEVVRAGILSVDR 179 Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 GQ EAA ALG++ + R V+LPQAMR IIPP +Q + +LK +SL + F +L+ Sbjct: 180 GQTEAAQALGMSRLRTLRRVVLPQAMRVIIPPTGNQVITMLKTTSLVSVLAFPELL 235 >gi|295107159|emb|CBL04702.1| amino acid ABC transporter membrane protein, PAAT family (TC 3.A.1.3.-) [Gordonibacter pamelaeae 7-10-1-b] Length = 480 Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 62/214 (28%), Positives = 115/214 (53%), Gaps = 23/214 (10%) Query: 189 IFVFSFVLGIVLSLFAT--RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246 + V SF L I L L + R+++H + +A+ YI+ ++ G P + + + + F Sbjct: 226 VVVVSFPLAIPLGLLLSFLRMAKH---RLPRAIGATYIN--IVRGTPLFLQLYIAF---F 277 Query: 247 DKPVLG--QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304 P++G NF G+ I L ++A++AEI R+G+ ++ +GQ EAA +LG Sbjct: 278 GLPLMGVQMDNFTMGA----------IVLVMNSSAYLAEIFRAGIQSISQGQFEAARSLG 327 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364 + + V++PQ +R +IP +TS+++ + K++SL AVG +L+ TI TG Sbjct: 328 MNGAQTMFFVIIPQTVRRVIPTMTSEFILMYKDTSLLAAVGVTELMMYAKTITAATGNVT 387 Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 I+ F YL ++I + +N + A+++ +K Sbjct: 388 PYIVAAGF-YLIVTIPLTKLINTMEARMSNGRRK 420 >gi|295703708|ref|YP_003596783.1| putative amino acid ABC transporter permease [Bacillus megaterium DSM 319] gi|294801367|gb|ADF38433.1| putative amino acid ABC transporter, permease protein [Bacillus megaterium DSM 319] Length = 241 Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 64/216 (29%), Positives = 114/216 (52%), Gaps = 20/216 (9%) Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248 I + S LG + LF + R + K + ++Y+S + G P LV + Y + Sbjct: 26 ISIISMALGSIFGLFIA-VCRIYKIPLLKQIAVIYVS--FMRGTPLLVQL---YVFFYGI 79 Query: 249 PVLGQF------NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302 P+ +F +GG T+SP +L IA + T+A+ +E+ RS + + RGQ EAA + Sbjct: 80 PIFIEFLNQTQGWHLGGDTISPLIYAL-IAYTLNTSAYQSEVFRSSIQTIDRGQFEAAYS 138 Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362 +G+T +A + ++ PQ++ + IP L + +++L+K +SLA AV +++++ I N + Sbjct: 139 IGMTTFQAIKRIIFPQSLVAAIPNLGNIFISLIKATSLAFAVKVVEIMAISKVIANDGYR 198 Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 +E+ L+ IY ++ F RL I EKK Sbjct: 199 YLEMYLVASLIYW----ILCFFFERLFVVI---EKK 227 >gi|291616827|ref|YP_003519569.1| OccM [Pantoea ananatis LMG 20103] gi|291151857|gb|ADD76441.1| OccM [Pantoea ananatis LMG 20103] Length = 243 Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 71/211 (33%), Positives = 109/211 (51%), Gaps = 21/211 (9%) Query: 189 IFVFSFVLGIVLS--LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246 +F+ SF+ G VL+ + A R+SR + + YI F G P ++ + L Y Sbjct: 24 LFISSFLCGGVLAVGILALRMSRW---RILSSFARGYILVFR--GSPLMIQLFLIYY--- 75 Query: 247 DKPVLGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302 LGQF I S V P F +ALS TAA+ AEI+R L+AVP GQ+EA +A Sbjct: 76 ---GLGQFGVIRHSFVWPFLREPFSCAVLALSLCTAAYTAEILRGALLAVPAGQVEAGMA 132 Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362 G++ R ++ P +R +P +++ + L+K+++LA V D+ V II +T + Sbjct: 133 CGMSRWLLLRRIIAPVMLRYALPAYSTEAILLVKSTALASLVTVWDVTGVAQQIIQRTYR 192 Query: 363 AIEIILIWMFIYLSLSIMI----ALFMNRLN 389 +E+ L IYL L+ +I AL RL Sbjct: 193 TMEVFLCAAAIYLILNFIIVQLYALLERRLT 223 >gi|154484326|ref|ZP_02026774.1| hypothetical protein EUBVEN_02039 [Eubacterium ventriosum ATCC 27560] gi|149734803|gb|EDM50720.1| hypothetical protein EUBVEN_02039 [Eubacterium ventriosum ATCC 27560] Length = 346 Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 35/120 (29%), Positives = 75/120 (62%), Gaps = 1/120 (0%) Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 + A+ AEIVR+ + ++ +GQ EAA ALG+ + + L+++PQ++R ++P + ++++ +LK Sbjct: 228 SGAYCAEIVRAAIQSIDKGQYEAAKALGMNYSQTMSLIVIPQSIRRMLPAICNEFIMVLK 287 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 ++SL A+ D+ ++ +I+N G I + + + IYL ++ N++ K ++ E Sbjct: 288 DASLVFAISLMDITTISNSIMNSDGSYI-VFIPALIIYLIITAFFTYIFNKIEKKFSVYE 346 >gi|42779547|ref|NP_976794.1| amino acid ABC transporter, permease protein [Bacillus cereus ATCC 10987] gi|42735463|gb|AAS39402.1| amino acid ABC transporter, permease protein [Bacillus cereus ATCC 10987] Length = 290 Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 49/126 (38%), Positives = 74/126 (58%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IAL+ + A+I EI R + +V RGQMEAA +LG+ + A R ++LPQA R IPPL +Q Sbjct: 149 IALAIHNGAYITEIFRGSIQSVDRGQMEAARSLGMPYPLAMRRIVLPQAFRQSIPPLGNQ 208 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++ LK+SSL VG ++L G +I Q ++ +I YL L ++ +N L Sbjct: 209 FIIGLKDSSLVAYVGLSELWGSGLSIAAGNFQQLDTYIIVGLYYLVLVLLFTYLVNLLEK 268 Query: 391 KIALKE 396 ++ KE Sbjct: 269 RLQRKE 274 >gi|331008515|gb|EGH88571.1| amino acid ABC transporter permease [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 220 Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 44/129 (34%), Positives = 74/129 (57%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + I L+ + + ++EIVR L A+PRGQ+EA A+GL ++ R VLLPQAMR I+P Sbjct: 91 FQAGAIGLTLFCGSHVSEIVRGALQAIPRGQLEAGKAIGLRFGQSLRYVLLPQAMRQILP 150 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 + ++K S+L +G A+L+ +I +T +E L F++ ++ I L Sbjct: 151 TWVNSSTEIVKASTLLSVIGVAELLLSTQQVIARTFMTLEFYLFAGFLFFLINYAIELLG 210 Query: 386 NRLNAKIAL 394 ++ ++AL Sbjct: 211 RQIEKRVAL 219 >gi|300313889|ref|YP_003777981.1| amino acid ABC transporter permease [Herbaspirillum seropedicae SmR1] gi|300076674|gb|ADJ66073.1| ABC-type amino acid transport system, permease component protein [Herbaspirillum seropedicae SmR1] Length = 277 Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 43/120 (35%), Positives = 76/120 (63%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P F + +A+ AA+ AEI+R+GL +VPRGQ+EAA LGL+ + V+L A+ + Sbjct: 88 PTFAAAVLAMIINIAAYAAEIIRAGLDSVPRGQIEAAQCLGLSVWRIRWHVMLQPAIERV 147 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 P LTSQ+L +++ S++A + +L ++ T+ + T +++E L+ +YL L+I++ L Sbjct: 148 YPALTSQFLLMMQASAMASQISAEELTAIANTVQSDTFRSLETYLVVAALYLVLAILVKL 207 Score = 37.0 bits (84), Expect = 6.0, Method: Compositional matrix adjust. Identities = 22/61 (36%), Positives = 31/61 (50%), Gaps = 4/61 (6%) Query: 93 FVNTFWLAFSGMIPATIIGTLVGA----GRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 F++ WL A I+G +G + S ++ +A C Y+EV RN P LV IF L Sbjct: 17 FLHGAWLTLKMTTLAVIVGVAIGIFVAFAKNSPHRWLARGCSAYIEVVRNTPFLVQIFLL 76 Query: 149 Y 149 Y Sbjct: 77 Y 77 >gi|168756599|ref|ZP_02781606.1| glutamine ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4401] gi|168767315|ref|ZP_02792322.1| glutamine ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4486] gi|189356223|gb|EDU74642.1| glutamine ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4401] gi|189363604|gb|EDU82023.1| glutamine ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4486] Length = 219 Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 58/198 (29%), Positives = 108/198 (54%), Gaps = 12/198 (6%) Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256 G+V+ L A +R F + L++I +I G P +V + Y F P+ FN Sbjct: 33 GLVIGLLAG-FARTFGGWIANHVALVFIE--VIRGTPIVVQVMFIY---FALPM--AFND 84 Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316 + + P F + + + + A+IAEI R ++++ +G EA +ALGL+ + R V+L Sbjct: 85 L---RIDP-FTAAVVTIMINSGAYIAEITRGAVLSIHKGFREAGLALGLSRWETIRYVIL 140 Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376 P A+R ++PPL +Q++ +K++SL + +G A+L G II +A+EI YL Sbjct: 141 PLALRRMLPPLGNQWIISIKDTSLFIVIGVAELTRQGQEIIAGNFRALEIWSAVAVFYLI 200 Query: 377 LSIMIALFMNRLNAKIAL 394 ++++++ + RL ++ + Sbjct: 201 ITLVLSFILRRLERRMKI 218 >gi|326693349|ref|ZP_08230354.1| amino acid ABC transporter periplasmic protein [Leuconostoc argentinum KCTC 3773] Length = 481 Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 50/179 (27%), Positives = 85/179 (47%), Gaps = 23/179 (12%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 + LPL+ ++ F+ GLP L + + P F + I L Sbjct: 326 RGLPLMVLAFFIYIGLPGLTGVKI-----------------------PAFTAGIITLILN 362 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 A+ V G AV RGQMEAA +LGL++ +A R V++PQ +R ++P +Q++ LK Sbjct: 363 EGAYTGAFVCGGFEAVNRGQMEAARSLGLSYSQAMRRVVMPQGLRIMVPSFINQFIITLK 422 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395 ++S+ A+G +L G I+ + Q + I +YL L ++ F + ++ K Sbjct: 423 DTSILSAIGLLELTQTGSLIVARNSQGFRVWAIIGVMYLILITLLTWFSRWVEKRMTAK 481 >gi|300790863|ref|YP_003771154.1| amino acid ABC transporter permease [Amycolatopsis mediterranei U32] gi|299800377|gb|ADJ50752.1| permease component of ABC-type amino acid transport system [Amycolatopsis mediterranei U32] Length = 254 Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 44/131 (33%), Positives = 80/131 (61%), Gaps = 5/131 (3%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +ALS AA+I EI RSG+ +V +GQMEA+ ALG+++ K+ LV++PQ +R ++P L +Q Sbjct: 103 LALSLIAAAYIGEIFRSGIQSVDKGQMEASRALGMSYTKSMLLVIIPQGVRRVLPALVNQ 162 Query: 331 YLNLLKNSSLAVAVGF----ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386 ++ L+K+SSL +G +L +G + TG ++ +F +L +++ + +N Sbjct: 163 FIALVKDSSLVYVLGLLSGQRELFRIGQDLAANTGNLSPLVAAGVF-FLVITVPLTHLVN 221 Query: 387 RLNAKIALKEK 397 ++ K+ K Sbjct: 222 YIDKKLRTGRK 232 Score = 38.1 bits (87), Expect = 2.7, Method: Compositional matrix adjust. Identities = 23/90 (25%), Positives = 41/90 (45%), Gaps = 12/90 (13%) Query: 82 DSSYATAIL-----VGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136 D Y + +L G +NT L+ S + T++G ++ LS + W R+Y ++F Sbjct: 10 DWDYISQVLPDLLKTGLLNTLILSVSSALIGTVVGMVLAVMGLSTKWWLRWPARIYTDIF 69 Query: 137 RNIPPLVVIFF-------LYKSVLSVLPIP 159 R +P ++ I L + V+ P P Sbjct: 70 RGLPAILTILLIGQGLGTLARDVVGTNPYP 99 >gi|296272119|ref|YP_003654750.1| polar amino acid ABC transporter inner membrane subunit [Arcobacter nitrofigilis DSM 7299] gi|296096294|gb|ADG92244.1| polar amino acid ABC transporter, inner membrane subunit [Arcobacter nitrofigilis DSM 7299] Length = 359 Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 55/172 (31%), Positives = 96/172 (55%), Gaps = 15/172 (8%) Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240 LTM + V SF +GI+ +L R + K + +LYI I G+P + L+ Sbjct: 155 LTMVVASVGIVVSFPIGIIFAL-----GRQSNMPIIKTISVLYIE--FIRGVPLITLL-- 205 Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300 F V+ F G T + + I ++ + AA++AE+VR GL A+P+GQ EAA Sbjct: 206 -----FMSSVILPLFFPEGVTFD-KLLRALIGVTLFQAAYLAEVVRGGLQAIPKGQYEAA 259 Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352 ++GL++ +A LV+LPQA++ IP + ++ L K+++L + +G D++++ Sbjct: 260 DSVGLSYWQAMGLVILPQALKISIPNIVGSFVALFKDTTLVLIIGLFDVLAM 311 >gi|221209883|ref|ZP_03582864.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia multivorans CGD1] gi|221170571|gb|EEE03037.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia multivorans CGD1] Length = 500 Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 57/182 (31%), Positives = 94/182 (51%), Gaps = 10/182 (5%) Query: 194 FVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ 253 + LG++L F L+R H+ K +YI F LP LVL+ Y L P Sbjct: 32 WALGVLLG-FPVALARQSHQPALKRAAAVYIWFFR--SLPLLVLLVFIYNLPQVFPATS- 87 Query: 254 FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313 + +S F + IA+ A+ AEI R G+++VPRGQ+EA ALG+ R+ Sbjct: 88 ------AVLSDPFTAGLIAMVFSETAYFAEIHRGGILSVPRGQLEAGRALGIRFTGIQRM 141 Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI 373 +++PQA+R +P L ++++ ++K +SL + A+++ VG + Q E +L F Sbjct: 142 IVMPQAIRIALPALANEFITIVKLTSLVSVISLAEILLVGQRLYTQNFLVFETMLAVAFY 201 Query: 374 YL 375 Y+ Sbjct: 202 YV 203 >gi|254473824|ref|ZP_05087219.1| ABC-type glutamine transport system, permease component [Pseudovibrio sp. JE062] gi|211957210|gb|EEA92415.1| ABC-type glutamine transport system, permease component [Pseudovibrio sp. JE062] Length = 248 Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 52/171 (30%), Positives = 95/171 (55%), Gaps = 12/171 (7%) Query: 212 HEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYI 271 K G A Y+ ++ +P+LVLI + +++ PV+ + F + + Sbjct: 75 DNKFGLAFNRTYVE--VVRSVPSLVLI---FWVYYGLPVVANISI-------NVFWAGVL 122 Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 AL+ +AF AEI R+G+ +V +GQ+EA +LGL++ + R ++LPQA+R ++PPL +Q Sbjct: 123 ALALSDSAFQAEIFRAGIQSVDKGQIEAGHSLGLSYFQRLRFIILPQAIRRMLPPLGNQL 182 Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382 + +LK SSL +G DL ++ + +EI + + YL L ++++ Sbjct: 183 VYMLKMSSLVSVIGLQDLTRRANELVVTEYRPLEIYTVLVLEYLVLILIVS 233 Score = 36.6 bits (83), Expect = 7.7, Method: Compositional matrix adjust. Identities = 20/61 (32%), Positives = 34/61 (55%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 ++ G T ++ + + + ++G V LS NK R YVEV R++P LV+IF++ Sbjct: 43 MIAGLQETISVSLTAIAISMLVGLFVALPGLSDNKFGLAFNRTYVEVVRSVPSLVLIFWV 102 Query: 149 Y 149 Y Sbjct: 103 Y 103 >gi|218779109|ref|YP_002430427.1| polar amino acid ABC transporter, inner membrane subunit [Desulfatibacillum alkenivorans AK-01] gi|218760493|gb|ACL02959.1| polar amino acid ABC transporter, inner membrane subunit [Desulfatibacillum alkenivorans AK-01] Length = 267 Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 50/166 (30%), Positives = 93/166 (56%), Gaps = 16/166 (9%) Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287 ++ G+P LV QL + LG+F + P+ ++ IA+S A++ E+ R+ Sbjct: 109 IVRGIPLLV------QLFYLYYALGKFIQV------PDKLAAIIAMSICYGAYMGEVFRA 156 Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347 G+ ++ +GQ EAA +LG + V+LPQA R+I+PP+ ++++ LLK++SL +G A Sbjct: 157 GIDSIDKGQTEAARSLGFNGAQTMMYVILPQAWRTILPPVGNEFIALLKDTSLVSILGVA 216 Query: 348 DLVSVGGTIINQTGQAIE----IILIWMFIYLSLSIMIALFMNRLN 389 DL+ G + + E + ++++ I L LS ++++ RL Sbjct: 217 DLLRRGREYASTSFDYFETYTMVAVVYLIITLILSKLVSIMEERLG 262 Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 28/70 (40%), Positives = 40/70 (57%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151 G TF + FS ++ A IIG G GRLS +V + YVE+ R IP LV +F+LY + Sbjct: 66 GIYVTFQVTFSSILLAIIIGFFTGLGRLSKIWIVNILASTYVEIVRGIPLLVQLFYLYYA 125 Query: 152 VLSVLPIPDH 161 + + +PD Sbjct: 126 LGKFIQVPDK 135 >gi|307130609|ref|YP_003882625.1| glutamine ABC transporter membrane protein [Dickeya dadantii 3937] gi|306528138|gb|ADM98068.1| glutamine transporter subunit; membrane component of ABC superfamily [Dickeya dadantii 3937] Length = 219 Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 39/118 (33%), Positives = 74/118 (62%) Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 + A+IAEI R ++++ +G EA +ALGL+HR R V+ P A+R ++PPL +Q++ +K Sbjct: 101 SGAYIAEITRGAVLSIHKGFTEAGLALGLSHRATLRHVITPLALRRMLPPLGNQWIISIK 160 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394 ++SL + +G ++L II +A+EI+ IYL +++++ + M L ++ + Sbjct: 161 DTSLCIVIGVSELTRQAQEIIAGNFRALEILTATAIIYLVITLVLTIGMRWLERRLKI 218 >gi|300933045|ref|ZP_07148301.1| glutamate transporter permease protein GluD [Corynebacterium resistens DSM 45100] Length = 312 Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 49/137 (35%), Positives = 79/137 (57%), Gaps = 11/137 (8%) Query: 220 PLLYISTFLI---FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 P+ ++ T ++ +P L+L+ YQ V + + T F ++ L+ Y Sbjct: 101 PVRWLCTIIVEFFRAIPVLLLMIFAYQ------VFAIYGLV--PTKHLAFGAVVFGLTMY 152 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 + IAEI+RSG+ A+P GQ EAAIALGL+ R+ +LLPQA+ S++P L SQ + LK Sbjct: 153 NGSVIAEILRSGIRALPAGQEEAAIALGLSRRQTMFKILLPQAVASMLPALISQMVIALK 212 Query: 337 NSSLAVAVGFADLVSVG 353 +S+L +G+ ++V G Sbjct: 213 DSALGYLIGYVEVVRSG 229 Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 29/73 (39%), Positives = 42/73 (57%) Query: 78 PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137 P+ + + T IL G T A +I A I+GT++G GRLS V W+C + VE FR Sbjct: 55 PFLTGDMWTTYILPGLWGTLKAAVVSIILAIIVGTVLGLGRLSVVAPVRWLCTIIVEFFR 114 Query: 138 NIPPLVVIFFLYK 150 IP L+++ F Y+ Sbjct: 115 AIPVLLLMIFAYQ 127 >gi|145224551|ref|YP_001135229.1| polar amino acid ABC transporter, inner membrane subunit [Mycobacterium gilvum PYR-GCK] gi|145217037|gb|ABP46441.1| amino acid ABC transporter membrane protein 1, PAAT family [Mycobacterium gilvum PYR-GCK] Length = 226 Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 47/140 (33%), Positives = 81/140 (57%), Gaps = 6/140 (4%) Query: 263 SPEFMS------LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316 SP F++ + L+ YTA+F+ E VR+G+ +P GQ EAA +LGLT + R+VLL Sbjct: 87 SPTFIADSGFRLAVLGLTVYTASFVCETVRAGVNTIPLGQAEAARSLGLTFGQNLRIVLL 146 Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376 PQA R+++ PL S + L KN+++A A+G A+ + +I T + + I+ ++ Sbjct: 147 PQAFRAVVIPLGSVLIALTKNTTIASAIGVAEAALLMKEMIENTAAVLVVGGIFALGFVI 206 Query: 377 LSIMIALFMNRLNAKIALKE 396 L++ + L L ++A+ Sbjct: 207 LTLPLGLVFGWLGKRLAVAR 226 Score = 36.6 bits (83), Expect = 8.1, Method: Compositional matrix adjust. Identities = 21/65 (32%), Positives = 32/65 (49%) Query: 83 SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142 + Y I F T L I A ++GT++ A RL+ ++ WI YV + RN P Sbjct: 5 TEYREEIFAAFWTTVQLTVLSAIGALVLGTVLAAMRLAPVPMLNWIGTAYVNLVRNTPLT 64 Query: 143 VVIFF 147 ++I F Sbjct: 65 LIILF 69 >gi|93005160|ref|YP_579597.1| amino acid ABC transporter permease [Psychrobacter cryohalolentis K5] gi|92392838|gb|ABE74113.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Psychrobacter cryohalolentis K5] Length = 241 Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 64/202 (31%), Positives = 105/202 (51%), Gaps = 22/202 (10%) Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQF-- 254 G+VL+L RLS+++ + P LYI F G P LV I L Y LGQF Sbjct: 37 GLVLALL--RLSKNW---VVQIFPFLYI--FFFRGTPLLVQIFLIYY------GLGQFEA 83 Query: 255 ---NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311 +F+ +S + IA + T+A++AEI+R + +P G++EAA A+G++ + Sbjct: 84 VRNSFLWEPVLSQAYWCAIIAFTLNTSAYLAEIIRGAIQNIPVGELEAADAIGMSKWQKL 143 Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371 + LP+A +IP +++ + +LK S+LA + D+ V TI +T +E+ Sbjct: 144 TRITLPRAFGIVIPAYSNEVIFMLKGSALASTIALMDITGVARTISARTYTLMELFFAAG 203 Query: 372 FIYLSLSIMI----ALFMNRLN 389 +YL LS +I +F R+N Sbjct: 204 IVYLLLSWVILFSFRMFEKRMN 225 >gi|308186173|ref|YP_003930304.1| ABC transport system permease protein [Pantoea vagans C9-1] gi|308056683|gb|ADO08855.1| putative ABC transport system permease protein [Pantoea vagans C9-1] Length = 246 Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 72/221 (32%), Positives = 112/221 (50%), Gaps = 24/221 (10%) Query: 189 IFVFSFVLGIVLS--LFATRLSRHFHEKTGKALPLLYISTFLIF-GLPTLVLIALKYQLH 245 +F+ +F+ G VL+ + A R+SR + L L+F G P ++ + L Y Sbjct: 24 LFISAFLCGGVLAVGILALRMSRW------RGLSAFARGYILVFRGSPLMIQLFLIYY-- 75 Query: 246 FDKPVLGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301 LGQF I S P F +ALS TAA+ AEI+R L+AVP GQ+EA + Sbjct: 76 ----GLGQFGVIRHSIFWPFLREPFTCAVLALSLCTAAYTAEILRGALLAVPPGQVEAGM 131 Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361 A G++ R ++ P +R +P +++ + L+K+++LA V D+ V II +T Sbjct: 132 ACGMSRGLLLRRIIAPVMLRYALPAYSTEAILLVKSTALASLVTVWDVTGVAQQIIQRTY 191 Query: 362 QAIEIILIWMFIYLSLSIMI----ALFMNRLNAKIALKEKK 398 + +E+ L IYL L+ +I AL RL + EKK Sbjct: 192 RTMEVFLCAAAIYLILNFIIVQLYALLERRLT-PVHKPEKK 231 >gi|227325816|ref|ZP_03829840.1| amino-acid ABC transporter permease protein [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 223 Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 65/221 (29%), Positives = 118/221 (53%), Gaps = 21/221 (9%) Query: 178 FPTLTMDTNAKIFV------FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231 FP + M +F+ F+ VLG++L+L R + LYIS F G Sbjct: 12 FPQVLMYLPTTLFLAVVSMFFAMVLGLILALV-----RESKIVVVVKIVELYISLFR--G 64 Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291 +P+LV + + ++F P L F G S + ++ I S T+A++AEI R+GL + Sbjct: 65 IPSLVQL---FIIYFGLPQL----FPGLSNLDAMTAAI-IGFSLKTSAYMAEIFRAGLAS 116 Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 V GQ EA +++G++ + R ++LPQAM + +P + +++L+K++S+A A+G ++L + Sbjct: 117 VDFGQTEAGLSIGMSKAQVYRRIVLPQAMLNALPATGNTFISLIKDTSVAFALGVSELFA 176 Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 G I ++ + E L+ IY + I+ + +L K+ Sbjct: 177 EGKMIAAESLRFFETFLVVGLIYWLVIIVYSWLQKQLEKKL 217 >gi|190894702|ref|YP_001984995.1| putative amino acid ABC transporter permease [Rhizobium etli CIAT 652] gi|190700363|gb|ACE94445.1| probable amino acid ABC transporter, permease protein [Rhizobium etli CIAT 652] Length = 220 Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 50/180 (27%), Positives = 91/180 (50%), Gaps = 24/180 (13%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 + LP+L + F F LP + L DK S + LS Y Sbjct: 65 RNLPILVLVLFAFFALP-------QMGLRLDK-----------------MKSFVLVLSLY 100 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 + A++AE+ R+GL+++PRG EA +A+GLT + ++ P +R+++P L+S ++L K Sbjct: 101 SGAYLAEVFRAGLLSIPRGLTEAGLAIGLTGMQIRSSIIAPLMLRNVLPSLSSTIISLFK 160 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 ++SLA A+ +L I ++ + IE ++ +Y++ +IA M + ++AL Sbjct: 161 DTSLAAAIAVPELTFAARKINVESFRVIETWMVTSALYVATCFLIAALMRLVERRLALPR 220 >gi|167766046|ref|ZP_02438099.1| hypothetical protein CLOSS21_00539 [Clostridium sp. SS2/1] gi|317498083|ref|ZP_07956386.1| binding-protein-dependent transport system inner membrane component [Lachnospiraceae bacterium 5_1_63FAA] gi|167712126|gb|EDS22705.1| hypothetical protein CLOSS21_00539 [Clostridium sp. SS2/1] gi|291560004|emb|CBL38804.1| amino acid ABC transporter membrane protein, PAAT family (TC 3.A.1.3.-) [butyrate-producing bacterium SSC/2] gi|316894671|gb|EFV16850.1| binding-protein-dependent transport system inner membrane component [Lachnospiraceae bacterium 5_1_63FAA] Length = 225 Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 56/203 (27%), Positives = 108/203 (53%), Gaps = 16/203 (7%) Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFN 255 LG +L+L RL+ K+ + Y+ +I G PTL + + Y + GQ Sbjct: 39 LGTILALM--RLTAEQKGKSTLLSKIAYVYIDIIRGTPTLTQLMIMYFVILK----GQNG 92 Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315 + GS + +AA++AEI+R+G+ AV +GQME +LGL++ + + ++ Sbjct: 93 LLVGS----------LTFGLNSAAYVAEIIRAGIQAVDQGQMEGGRSLGLSYVQTMKDII 142 Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375 LPQA+++I+P L ++++ L+K +S+ V DL V +I++ +A+ +L IY Sbjct: 143 LPQAIKNILPALGNEFIVLIKETSILGYVAIVDLTKVSDFVISRIFEALAPLLGTALIYY 202 Query: 376 SLSIMIALFMNRLNAKIALKEKK 398 + ++ L +N L ++ +++ Sbjct: 203 VIVKILTLGLNALERRLRQSDRR 225 >gi|146342964|ref|YP_001208012.1| glutamate/aspartate ABC transporter permease [Bradyrhizobium sp. ORS278] gi|146195770|emb|CAL79797.1| glutamate/aspartate ABC transporter (permease protein) [Bradyrhizobium sp. ORS278] Length = 243 Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 44/129 (34%), Positives = 75/129 (58%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + + + + +A +A + +G+ ++PRGQ AA ALGLT + R VLLP A R I+P Sbjct: 108 FFTAAVGIGLFMSARVAVQLAAGIGSLPRGQKMAATALGLTTLQVYRYVLLPMAFRIILP 167 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PLTS++LN +KNS++A+ +G +L + + Q E +YL ++I++ + M Sbjct: 168 PLTSEFLNTVKNSAVAITIGLIELTGAARAMQEFSFQVFEAFSAATLMYLVINIIVVIGM 227 Query: 386 NRLNAKIAL 394 L +A+ Sbjct: 228 RLLERAVAI 236 Score = 45.8 bits (107), Expect = 0.011, Method: Compositional matrix adjust. Identities = 29/78 (37%), Positives = 41/78 (52%) Query: 80 TSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNI 139 T +Y +L G T + S + A I GT+VG R +KL WI +YVE FRN+ Sbjct: 16 TGAGTYFDMLLAGLKVTIVTSLSAWLIALIFGTIVGILRSLPSKLAGWIGFLYVEFFRNM 75 Query: 140 PPLVVIFFLYKSVLSVLP 157 P LV +F + + +LP Sbjct: 76 PLLVQLFLWFFVLPELLP 93 >gi|15600348|ref|NP_253842.1| amino acid (lysine/arginine/ornithine/histidine/octopine) ABC transporter membrane protein [Pseudomonas aeruginosa PAO1] gi|107104255|ref|ZP_01368173.1| hypothetical protein PaerPA_01005329 [Pseudomonas aeruginosa PACS2] gi|116053302|ref|YP_793626.1| ABC transporter permease [Pseudomonas aeruginosa UCBPP-PA14] gi|218894255|ref|YP_002443124.1| putative permease of ABC transporter [Pseudomonas aeruginosa LESB58] gi|254238142|ref|ZP_04931465.1| hypothetical protein PACG_04264 [Pseudomonas aeruginosa C3719] gi|296392009|ref|ZP_06881484.1| putative permease of ABC transporter [Pseudomonas aeruginosa PAb1] gi|313110216|ref|ZP_07796113.1| amino acid (lysine/arginine/ornithine/histidine/octopine) ABC transporter membrane protein [Pseudomonas aeruginosa 39016] gi|9951456|gb|AAG08540.1|AE004928_6 amino acid (lysine/arginine/ornithine/histidine/octopine) ABC transporter membrane protein [Pseudomonas aeruginosa PAO1] gi|115588523|gb|ABJ14538.1| putative amino acid ABC transporter, permease protein [Pseudomonas aeruginosa UCBPP-PA14] gi|126170073|gb|EAZ55584.1| hypothetical protein PACG_04264 [Pseudomonas aeruginosa C3719] gi|218774483|emb|CAW30300.1| probable permease of ABC transporter [Pseudomonas aeruginosa LESB58] gi|310882615|gb|EFQ41209.1| amino acid (lysine/arginine/ornithine/histidine/octopine) ABC transporter membrane protein [Pseudomonas aeruginosa 39016] Length = 230 Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 59/190 (31%), Positives = 104/190 (54%), Gaps = 15/190 (7%) Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFN 255 L + L L R SRH++ + A+P YI F G P L+ QL L QF Sbjct: 33 LALALPLGIARASRHWYVR---AVPYAYI--FFFRGTPLLL------QLFIVYYGLAQFE 81 Query: 256 FIGGSTVSPEFMSLY----IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311 + S P Y + ++ +TAA+IAEI+R + +VP G++EAA ALG++ R+A Sbjct: 82 EVRKSAFWPYLRDPYWCALLTMTLHTAAYIAEILRGAIHSVPVGEVEAARALGMSRRQAL 141 Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371 ++LP+A+R +P +++ + +LK S++ V D++ + TII +T +++ + Sbjct: 142 WHIILPRAVRIGLPAYSNEVILMLKASAVVYTVTLFDIMGMARTIIARTYESMLFFCLAG 201 Query: 372 FIYLSLSIMI 381 +YL ++I++ Sbjct: 202 ALYLVITIVL 211 >gi|323438846|gb|EGA96583.1| substrate-binding glutamine ABC transporter [Staphylococcus aureus O11] Length = 467 Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 42/124 (33%), Positives = 77/124 (62%), Gaps = 4/124 (3%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IAL ++A+IAEI+R+G+ AV +GQMEAA + GL +R+ + V++PQA+++I+P L ++ Sbjct: 342 IALVINSSAYIAEIIRAGINAVDKGQMEAARSFGLNYRQTMKSVIMPQAIKNILPALGNE 401 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN---- 386 ++ L+K SS+ +G +++ + + +L+ +Y L+ ++ MN Sbjct: 402 FVTLIKESSIVSTIGVGEIMFNAQVVQGISFDPFTPLLVAAALYFVLTFVLTRIMNMIEG 461 Query: 387 RLNA 390 RLNA Sbjct: 462 RLNA 465 Score = 43.9 bits (102), Expect = 0.049, Method: Compositional matrix adjust. Identities = 21/67 (31%), Positives = 37/67 (55%) Query: 83 SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142 S Y + L G T ++ G+ +I+G V +LS K+++WI +Y+E+ R P L Sbjct: 257 SKYGSFFLKGIKITILISLIGVALGSILGAFVALMKLSKIKVISWIASIYIEILRGTPML 316 Query: 143 VVIFFLY 149 V +F ++ Sbjct: 317 VQVFIVF 323 >gi|91778283|ref|YP_553491.1| ABC amino acid transporter, inner membrane subunit [Burkholderia xenovorans LB400] gi|91690943|gb|ABE34141.1| amino acid ABC transporter membrane protein 2, PAAT family [Burkholderia xenovorans LB400] Length = 251 Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 48/147 (32%), Positives = 83/147 (56%), Gaps = 4/147 (2%) Query: 251 LGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306 +GQF I S + P +M ++L+ TA + AEI+R GL+AVP GQ+EA ++GL+ Sbjct: 78 MGQFGVIRESFLWPVLREPYMCAVLSLALCTAGYTAEIIRGGLMAVPVGQIEAGYSIGLS 137 Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 R V+ P A+R +P +++ + L+K+++LA V ++ V II QT + E+ Sbjct: 138 GFALLRRVIGPIALRQCLPAYSTEAVLLVKSTALASLVTVWEVTGVAQQIIQQTYRTTEV 197 Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIA 393 + IYL L+ +I + L +++ Sbjct: 198 FICAALIYLFLNFVIVRLLGLLETRLS 224 >gi|116491604|ref|YP_811148.1| ABC-type amino acid transport system, permease component [Oenococcus oeni PSU-1] gi|290891211|ref|ZP_06554273.1| hypothetical protein AWRIB429_1663 [Oenococcus oeni AWRIB429] gi|116092329|gb|ABJ57483.1| amino acid ABC transporter membrane protein 1, PAAT family [Oenococcus oeni PSU-1] gi|290479175|gb|EFD87837.1| hypothetical protein AWRIB429_1663 [Oenococcus oeni AWRIB429] Length = 214 Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 58/180 (32%), Positives = 91/180 (50%), Gaps = 14/180 (7%) Query: 213 EKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIA 272 KT + YI F +P L+++ Y V+ + IGG T I Sbjct: 45 SKTANVIARAYIEVFR--NIPLLIIVMFFYL------VVTKIVKIGGFTAGT------IG 90 Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 L+ YT+AFIAE VR+G+ +V GQ E A A GL+ + R+++LPQA + IP L +Q++ Sbjct: 91 LTLYTSAFIAETVRAGINSVGIGQTEGARANGLSSWQTLRIIILPQAFKIAIPSLGNQFI 150 Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 NL+KNSS+ V DL+ + T + +I YL +++ + +M L K+ Sbjct: 151 NLVKNSSILAFVAGGDLMYTANNVAATTFDSFNSYIIVGIFYLIITLPLNYYMKFLETKL 210 Score = 45.4 bits (106), Expect = 0.015, Method: Compositional matrix adjust. Identities = 25/69 (36%), Positives = 39/69 (56%) Query: 90 LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 LV F T + +I +T++GTL ++ +K I R Y+EVFRNIP L+++ F Y Sbjct: 13 LVAFGYTLLSSIIALIASTVLGTLFAILQIVPSKTANVIARAYIEVFRNIPLLIIVMFFY 72 Query: 150 KSVLSVLPI 158 V ++ I Sbjct: 73 LVVTKIVKI 81 >gi|302866035|ref|YP_003834672.1| polar amino acid ABC transporter inner membrane subunit [Micromonospora aurantiaca ATCC 27029] gi|302568894|gb|ADL45096.1| polar amino acid ABC transporter, inner membrane subunit [Micromonospora aurantiaca ATCC 27029] Length = 291 Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 39/92 (42%), Positives = 61/92 (66%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 +F +L I L+ Y + +AEI R+G+ AVP GQ E A A+G+ + RL+LLPQA RS++ Sbjct: 136 KFWALVIGLTLYNGSVLAEIFRAGINAVPYGQSEGAYAIGMRKNQVLRLILLPQAFRSML 195 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356 P + SQ + LLK+++L + + +L+ VG I Sbjct: 196 PAIVSQLVVLLKDTALGFIITYPELLFVGKQI 227 >gi|239831567|ref|ZP_04679896.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium LMG 3301] gi|239823834|gb|EEQ95402.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium LMG 3301] Length = 387 Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 34/82 (41%), Positives = 59/82 (71%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I ++ + +A++AE+VR GL A+PRGQ E A ALGL++ + T L++LPQA++ +IP + + Sbjct: 255 IGVALFASAYMAEVVRGGLQAIPRGQYEGADALGLSYWQKTGLIILPQALKLVIPGIVNT 314 Query: 331 YLNLLKNSSLAVAVGFADLVSV 352 ++ L K++SL +G DL+ + Sbjct: 315 FIGLFKDTSLVYIIGMFDLLGI 336 >gi|170769014|ref|ZP_02903467.1| glutamine ABC transporter, permease protein [Escherichia albertii TW07627] gi|170122086|gb|EDS91017.1| glutamine ABC transporter, permease protein [Escherichia albertii TW07627] Length = 219 Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 58/198 (29%), Positives = 108/198 (54%), Gaps = 12/198 (6%) Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256 G+V+ L A +R F + L++I +I G P +V + Y F P+ FN Sbjct: 33 GLVIGL-AAGFARTFGGWIANHIALVFIE--VIRGTPIVVQVMFIY---FALPM--AFND 84 Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316 + + P F + + + + A+IAEI R ++++ +G EA +ALGL+ + R V+L Sbjct: 85 L---RIDP-FTAAVVTIMINSGAYIAEITRGAVLSIHKGFREAGLALGLSRWETIRYVIL 140 Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376 P A+R ++PPL +Q++ +K++SL + +G A+L G II +A+EI YL Sbjct: 141 PLALRRMLPPLGNQWIISIKDTSLFIVIGVAELTRQGQEIIAGNFRALEIWSAVAVFYLI 200 Query: 377 LSIMIALFMNRLNAKIAL 394 ++++++ + RL ++ + Sbjct: 201 ITLVLSFILRRLERRMKI 218 >gi|157368268|ref|YP_001476257.1| polar amino acid ABC transporter inner membrane subunit [Serratia proteamaculans 568] gi|157320032|gb|ABV39129.1| polar amino acid ABC transporter, inner membrane subunit [Serratia proteamaculans 568] Length = 246 Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 39/135 (28%), Positives = 81/135 (60%), Gaps = 1/135 (0%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 PE ++ AL+ +A++A V++G+ A+ GQ +A ++LGLT + R+++LPQA+R + Sbjct: 94 PEITTVVCALALIASAYLAHAVKAGIAAIGPGQWQAGLSLGLTRWQTLRMIVLPQALRMM 153 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG-QAIEIILIWMFIYLSLSIMIA 382 +P +Q+++L+K++SLA VG +L + + N++ +E+ L +Y + + Sbjct: 154 VPSFINQWISLIKDTSLAYIVGVGELTFLATQVNNRSMVYPMEVFLFIALVYFVFCLALD 213 Query: 383 LFMNRLNAKIALKEK 397 L N +N + + + + Sbjct: 214 LLANAVNRRFSPQTR 228 >gi|85704885|ref|ZP_01035986.1| glutamate/aspartate ABC transporter, permease protein [Roseovarius sp. 217] gi|85670703|gb|EAQ25563.1| glutamate/aspartate ABC transporter, permease protein [Roseovarius sp. 217] Length = 218 Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 42/127 (33%), Positives = 73/127 (57%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F S IA + AA+ +EI+R+G+ +V GQ+ A A GL + + R ++LPQA R++IP Sbjct: 90 FYSALIAFVMFEAAYYSEIMRAGIQSVRTGQVHAGQATGLGYWQVQRYIVLPQAFRNMIP 149 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 L +Q + L +++SL V DL++ + G+ +E+ L +Y + +LF+ Sbjct: 150 ILVTQGIILFQDTSLVFVVSLRDLMTASSIVARTEGRLVEMYLFAALVYFVICFAGSLFV 209 Query: 386 NRLNAKI 392 RL A++ Sbjct: 210 RRLQARM 216 Score = 40.0 bits (92), Expect = 0.64, Method: Compositional matrix adjust. Identities = 20/58 (34%), Positives = 33/58 (56%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 G + WL F ++ ++GTL+ RLS K +A YV + R++P ++VIF+ Y Sbjct: 19 GLQLSLWLTFLAVLGGVVLGTLLALARLSGIKPLALFAAAYVNLIRSVPLILVIFWFY 76 >gi|326382647|ref|ZP_08204338.1| abc transporter integral membrane subunit [Gordonia neofelifaecis NRRL B-59395] gi|326198766|gb|EGD55949.1| abc transporter integral membrane subunit [Gordonia neofelifaecis NRRL B-59395] Length = 313 Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 48/130 (36%), Positives = 78/130 (60%), Gaps = 4/130 (3%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I L+ AA++AEIVR+G+ +V GQMEA++ALG++ + R +LPQAMR IIPP ++ Sbjct: 163 IGLALNEAAYMAEIVRAGISSVGEGQMEASVALGMSWWQTMRRTVLPQAMRVIIPPTGNE 222 Query: 331 YLNLLKNSSLAVAVGFA-DLVSVGGTIINQTGQAIEIILI---WMFIYLSLSIMIALFMN 386 +++LK +SL AV F+ +L I Q I ++L+ W + S+ ++ F+ Sbjct: 223 VISMLKTTSLVAAVPFSLELYGRSRDISGVNFQPIPMLLVASTWYLVVTSILMVGQHFVE 282 Query: 387 RLNAKIALKE 396 + K A +E Sbjct: 283 KHYEKGASRE 292 >gi|315444882|ref|YP_004077761.1| amino acid ABC transporter membrane protein 1, PAAT family [Mycobacterium sp. Spyr1] gi|315263185|gb|ADT99926.1| amino acid ABC transporter membrane protein 1, PAAT family [Mycobacterium sp. Spyr1] Length = 226 Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 47/140 (33%), Positives = 81/140 (57%), Gaps = 6/140 (4%) Query: 263 SPEFMS------LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316 SP F++ + L+ YTA+F+ E VR+G+ +P GQ EAA +LGLT + R+VLL Sbjct: 87 SPTFIADSGFRLAVLGLTVYTASFVCETVRAGVNTIPLGQAEAARSLGLTFGQNLRIVLL 146 Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376 PQA R+++ PL S + L KN+++A A+G A+ + +I T + + I+ ++ Sbjct: 147 PQAFRAVVIPLGSVLIALTKNTTIASAIGVAEAALLMKEMIENTAAVLVVGGIFALGFVI 206 Query: 377 LSIMIALFMNRLNAKIALKE 396 L++ + L L ++A+ Sbjct: 207 LTLPLGLVFGWLGKRLAVAR 226 Score = 37.0 bits (84), Expect = 5.4, Method: Compositional matrix adjust. Identities = 29/112 (25%), Positives = 45/112 (40%), Gaps = 13/112 (11%) Query: 83 SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142 + Y I F T L I A ++GT++ A RL+ ++ WI YV + RN P Sbjct: 5 TEYREEIFAAFWTTVQLTVLSAIGALVLGTVLAAMRLAPVPMLNWIGTAYVNLVRNTPLT 64 Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSF 194 ++I F + GM L +R PT D+ ++ V Sbjct: 65 LIILFC-----------SFGLAQTLGMTLADR--QSPTFIADSGFRLAVLGL 103 >gi|304395807|ref|ZP_07377690.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea sp. aB] gi|304357101|gb|EFM21465.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea sp. aB] Length = 246 Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 73/220 (33%), Positives = 112/220 (50%), Gaps = 22/220 (10%) Query: 189 IFVFSFVLGIVLS--LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246 +F+ +F+ G VL+ + A R+SR + A YI F G P ++ + L Y Sbjct: 24 LFISAFLCGGVLAVGILALRMSRW---RLLSAFARGYILVFR--GSPLMIQLFLIYY--- 75 Query: 247 DKPVLGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302 LGQF I S P F +ALS TAA+ AEI+R L+AVP GQ+EA +A Sbjct: 76 ---GLGQFGVIRHSVFWPFLREPFTCAVLALSLCTAAYTAEILRGALLAVPPGQVEAGMA 132 Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362 G++ R ++ P +R +P +++ + L+K+++LA V D+ V II +T + Sbjct: 133 CGMSRGLLLRRIIAPVMLRYALPAYSTEAILLVKSTALASLVTVWDVTGVAQQIIQRTYR 192 Query: 363 AIEIILIWMFIYLSLSIMI----ALFMNRLNAKIALKEKK 398 +E+ L IYL L+ +I AL RL + EKK Sbjct: 193 TMEVFLCAAAIYLILNFIIVQLYALLERRLT-PVHKPEKK 231 >gi|240168771|ref|ZP_04747430.1| ABC transporter permease protein GlnQ [Mycobacterium kansasii ATCC 12478] Length = 599 Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 57/171 (33%), Positives = 94/171 (54%), Gaps = 13/171 (7%) Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285 T + GLP +V+I + LG +GG T + + AL A++ EI+ Sbjct: 413 TDIFRGLPEVVIILIIG--------LGVGPIVGGLTNNNPYPLGIAALGLMAGAYVGEIL 464 Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345 RSG+ +V GQ+EAA ALG ++ A RLV++PQ +R ++P L +Q++ LLK S+L +G Sbjct: 465 RSGIQSVDPGQLEAARALGFSYSAAMRLVVVPQGIRRVLPALVNQFIALLKASALVYFLG 524 Query: 346 FA----DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 +L +G + QTG ++ +F YL L+I + +N ++AK+ Sbjct: 525 LVAKQRELFQIGRDLNAQTGNLSPLVAAGIF-YLLLTIPLTHLVNYIDAKL 574 >gi|328956551|ref|YP_004373937.1| glutamine transport system permease protein GlnP [Carnobacterium sp. 17-4] gi|328672875|gb|AEB28921.1| glutamine transport system permease protein GlnP [Carnobacterium sp. 17-4] Length = 219 Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 45/124 (36%), Positives = 70/124 (56%), Gaps = 3/124 (2%) Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309 +LG I GST+ + IAL YTAA +AEIVR GL ++P+GQ EAA + G + + Sbjct: 73 MLGCAFLIPGSTI---LVKASIALFLYTAAVVAEIVRGGLNSIPKGQFEAAHSQGFSFFQ 129 Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369 ++LPQ + IIP L SQ + +K++S +G + G I+ + + E+ LI Sbjct: 130 TLVYIILPQTFKKIIPSLLSQVITTIKDTSFLAGLGIMEFTRSGQVILGKVTKTSEVFLI 189 Query: 370 WMFI 373 + F+ Sbjct: 190 YGFL 193 >gi|302539757|ref|ZP_07292099.1| His/Glu/Gln/Arg/opine family amino acid ABC transporter, permease [Streptomyces hygroscopicus ATCC 53653] gi|302457375|gb|EFL20468.1| His/Glu/Gln/Arg/opine family amino acid ABC transporter, permease [Streptomyces himastatinicus ATCC 53653] Length = 316 Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 52/156 (33%), Positives = 86/156 (55%), Gaps = 7/156 (4%) Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE-------FMSLYIALSCYTAA 279 +L G P LV + Y L P +G G + V E + + L + AA Sbjct: 115 WLFRGTPLLVQLLFWYFLSAIVPTIGLGVPWGPTFVEAETNVLITQLTAAVLGLGLHEAA 174 Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339 ++AEIVR+G+ +V GQ EAA ALG++ + R ++LPQA+R IIPP +Q +++LK +S Sbjct: 175 YMAEIVRAGITSVDDGQSEAAQALGMSRGQTLRRIVLPQALRIIIPPTGNQAISMLKTTS 234 Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375 L A+ +L++ I ++ Q + ++++ F YL Sbjct: 235 LVFAIAVPELLTSIQGIYSRNFQQVPLLVVACFWYL 270 >gi|148926584|ref|ZP_01810266.1| putative amino acid ABC tansporter permease protein [Campylobacter jejuni subsp. jejuni CG8486] gi|145845278|gb|EDK22372.1| putative amino acid ABC tansporter permease protein [Campylobacter jejuni subsp. jejuni CG8486] Length = 181 Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 43/114 (37%), Positives = 77/114 (67%), Gaps = 10/114 (8%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +AL ++A+IAEIVRSG+ +V +GQMEAA A+GL ++ + + ++LPQA ++I+P L ++ Sbjct: 57 LALGLNSSAYIAEIVRSGINSVDKGQMEAARAMGLDYKTSMKEIILPQATKNILPALANE 116 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI-----EIILIWMFIYLSLSI 379 +++L K +S+ VGF ++ + T+ +Q+ QA+ II + Y+S+ I Sbjct: 117 FISLFKETSV---VGFISVIDI--TMQSQSLQAVLYNPKPIIFTGLVYYVSVKI 165 >gi|300715979|ref|YP_003740782.1| Amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine [Erwinia billingiae Eb661] gi|299061815|emb|CAX58931.1| Amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine [Erwinia billingiae Eb661] Length = 290 Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 46/171 (26%), Positives = 100/171 (58%), Gaps = 4/171 (2%) Query: 231 GLPTLVLIALKYQLHFDKPVL---GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287 G P ++ + L + L PV+ G F+ + ++P F++ + LS A+ +E+VR+ Sbjct: 119 GTPLILQLLLWFNLALVFPVIAIPGVFSVETVNVMTP-FVAALLGLSINQGAYTSEVVRA 177 Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347 GL++V GQ EAA ++G+ +A + ++LPQAMR I+PP+ +++++++K +SLA + ++ Sbjct: 178 GLLSVDTGQYEAAKSIGMPRLQALQRIILPQAMRVILPPVGNEFISMIKTTSLASMIQYS 237 Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 +L+ I + +E++ + YL + +++ +RL + +++ Sbjct: 238 ELLYNTQNIYYANARVMELLFVAGIWYLIIVTVLSFGQSRLERYFSRGQRR 288 >gi|294637082|ref|ZP_06715396.1| glutamine ABC transporter, permease protein [Edwardsiella tarda ATCC 23685] gi|291089710|gb|EFE22271.1| glutamine ABC transporter, permease protein [Edwardsiella tarda ATCC 23685] Length = 218 Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 55/191 (28%), Positives = 100/191 (52%), Gaps = 12/191 (6%) Query: 204 ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVS 263 A +R F + L++I LI G P +V + Y F P++ + Sbjct: 39 AAGFARAFGGWLSNHVALVFIE--LIRGTPIVVQVMFIY---FALPMMMPLR------ID 87 Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P F + + + + A+IAEI R ++++ G EA +ALGL+ R R V++P A+R + Sbjct: 88 P-FTAAVVTIMINSGAYIAEITRGAVLSIHSGFREAGLALGLSRRDTLRYVIMPLALRRM 146 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 +PPL +Q++ +K++SL + +G A+L G II +A+EI IYL +++ ++ Sbjct: 147 LPPLGNQWIVSIKDTSLFIVIGVAELTRQGQEIIAGNFRAMEIWSAVAVIYLIMTLALSF 206 Query: 384 FMNRLNAKIAL 394 + RL ++ + Sbjct: 207 VLRRLERRLKI 217 >gi|282857320|ref|ZP_06266557.1| polar amino acid ABC transporter, inner membrane subunit [Pyramidobacter piscolens W5455] gi|282584820|gb|EFB90151.1| polar amino acid ABC transporter, inner membrane subunit [Pyramidobacter piscolens W5455] Length = 277 Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 49/176 (27%), Positives = 93/176 (52%), Gaps = 12/176 (6%) Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282 Y S F G P +V + L Y F P L + P F ++ + +AA+++ Sbjct: 114 YTSVFR--GTPLMVQLFLVY---FATPQLFDYQI-------PAFNAVVLTFGLNSAAYVS 161 Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342 EI+R G+ ++ GQ EAA+ALG+ +R +++PQA+R+++P L ++ + LLK++S+ Sbjct: 162 EILRGGIQSIDVGQREAAMALGVPYRAMMFDIVIPQALRTVLPSLVNELIALLKDTSIVA 221 Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 +G D++ T +N T A E ++ +Y L ++ +RL ++ ++ Sbjct: 222 TIGMLDMMRAAQTAMNSTYLAFEPFIVVAGMYYVLVMIFTAVASRLERRLHKSDRN 277 Score = 36.6 bits (83), Expect = 7.3, Method: Compositional matrix adjust. Identities = 23/81 (28%), Positives = 43/81 (53%), Gaps = 3/81 (3%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151 G +N+ + F +I +I GT++ ++S ++W Y VFR P +V +F +Y + Sbjct: 74 GMINSLEVTFMSVIMGSICGTVLALLKVSRLGPLSWFATAYTSVFRGTPLMVQLFLVYFA 133 Query: 152 VLSVLP--IPD-HSIVLPFGM 169 + IP +++VL FG+ Sbjct: 134 TPQLFDYQIPAFNAVVLTFGL 154 >gi|229120015|ref|ZP_04249270.1| Amino acid ABC transproter, permease [Bacillus cereus 95/8201] gi|228663481|gb|EEL19066.1| Amino acid ABC transproter, permease [Bacillus cereus 95/8201] Length = 233 Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 48/126 (38%), Positives = 74/126 (58%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IAL+ + A+I EI R + ++ RGQMEAA +LG+ + A R ++LPQA R IPPL +Q Sbjct: 92 IALAIHNGAYITEIFRGSIQSIDRGQMEAARSLGMPYSLAMRRIVLPQAFRQSIPPLGNQ 151 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++ LK+SSL VG ++L G +I Q ++ +I YL L ++ +N L Sbjct: 152 FIIGLKDSSLVAYVGLSELWGSGLSIAAGNFQQLDTYIIVGLYYLVLVLLFTYLVNLLEK 211 Query: 391 KIALKE 396 ++ KE Sbjct: 212 RLQRKE 217 >gi|58336459|ref|YP_193044.1| glutamine ABC transporter [Lactobacillus acidophilus NCFM] gi|58253776|gb|AAV42013.1| putative glutamine ABC transporter [Lactobacillus acidophilus NCFM] Length = 537 Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 41/116 (35%), Positives = 73/116 (62%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I +S T A++AE++R G+I+ P GQ EAA ALG+TH + ++LPQA+++ +P +T++ Sbjct: 391 IIVSINTGAYLAEVIRGGIISTPEGQFEAASALGMTHNQRMWHIILPQAIKNCLPSITNE 450 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386 ++ +K++S+ + ++L VG TI +Q+ + L+ IYL L+ I N Sbjct: 451 FIVNIKDTSVLSIISVSELFFVGTTIASQSFKFFPTYLMISAIYLILTFTITRIFN 506 Score = 37.7 bits (86), Expect = 3.6, Method: Compositional matrix adjust. Identities = 30/93 (32%), Positives = 38/93 (40%), Gaps = 10/93 (10%) Query: 67 RAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVG----------A 116 +AG E T+ Y I+ G T LA G I IG LVG Sbjct: 280 KAGNETKNENWLVTTWKQYGGMIMSGIGMTLLLALVGTIVGFFIGLLVGIVRTIPTPTTR 339 Query: 117 GRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 G+ A V W+ VYVE+FR P +V +Y Sbjct: 340 GKRWALNFVKWLLSVYVEIFRGTPMMVQAAVIY 372 >gi|269962689|ref|ZP_06177034.1| amino acid ABC transproter, permease protein [Vibrio harveyi 1DA3] gi|269832612|gb|EEZ86726.1| amino acid ABC transproter, permease protein [Vibrio harveyi 1DA3] Length = 223 Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 57/170 (33%), Positives = 97/170 (57%), Gaps = 15/170 (8%) Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALK 241 TM+ VFS +L ++L+ R F L LYIS F G P LV + L Sbjct: 22 TMEMATWGLVFSLILAVILANI-----RVFKLPVLDQLSQLYISFFR--GTPLLVQLFL- 73 Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301 L++ P + F F+ G F + I L+ + AA++AE +R+ +I + R QMEA++ Sbjct: 74 --LYYGLPQI--FPFMVGIDA---FSAAVIGLTLHFAAYMAESIRAAIIGIDRSQMEASL 126 Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 ++G+T +A R V+LPQA R +P L + +++++K++SLA +G A++++ Sbjct: 127 SVGMTTPQAMRRVILPQATRVALPSLMNYFIDMIKSTSLAFTLGVAEIMA 176 >gi|207723708|ref|YP_002254106.1| amino acid transmembrane protein [Ralstonia solanacearum MolK2] gi|206588912|emb|CAQ35874.1| amino acid transmembrane protein [Ralstonia solanacearum MolK2] Length = 230 Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 43/136 (31%), Positives = 82/136 (60%), Gaps = 5/136 (3%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 +F ++ AL + A++AEIVR+G+ A+PRGQME+A +LGL++ +A R V+LPQA+R+++ Sbjct: 94 QFSTMLTALVIFDGAYLAEIVRAGIQALPRGQMESARSLGLSYMQAMRRVILPQALRNML 153 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADL----VSVGGTIINQTGQAIEIILIWMFIY-LSLSI 379 P L +Q ++ +K +SL + ++ + ++ ++ + ++ + F+ L+ Sbjct: 154 PSLVNQLVSTIKETSLGYIISLPEVSFITTQISTAVMTKSAETYGLLALSYFVMCFGLTR 213 Query: 380 MIALFMNRLNAKIALK 395 L RL A+ A K Sbjct: 214 CAYLLERRLAARAASK 229 >gi|194015816|ref|ZP_03054431.1| glutamine-binding periplasmic protein/glutamine transport system permease protein [Bacillus pumilus ATCC 7061] gi|194012171|gb|EDW21738.1| glutamine-binding periplasmic protein/glutamine transport system permease protein [Bacillus pumilus ATCC 7061] Length = 230 Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 45/135 (33%), Positives = 81/135 (60%), Gaps = 6/135 (4%) Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320 T+ P + S IA S A+ +EI+R+ +++VP+GQ EA ++G+THRK V+LPQA+ Sbjct: 93 TLDP-YPSAIIAFSLNVGAYASEIIRASVLSVPKGQWEAGYSIGMTHRKTLVRVILPQAV 151 Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM---FIYLSL 377 R IPPL++ +++L+K++SLA + A+L I +I+ I+M IY Sbjct: 152 RVSIPPLSNSFISLVKDTSLASQILVAELFRKSQEI--AAANLDQILFIYMEAALIYWVF 209 Query: 378 SIMIALFMNRLNAKI 392 +++L +++ ++ Sbjct: 210 CFILSLVQHQIEKRL 224 >gi|170701275|ref|ZP_02892241.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria IOP40-10] gi|170133798|gb|EDT02160.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria IOP40-10] Length = 248 Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 49/147 (33%), Positives = 82/147 (55%), Gaps = 4/147 (2%) Query: 251 LGQFNFIGGSTVSPEFMSLYI----ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306 LGQF I S V P Y+ +L+ TA + AEI+R GL+AVP GQ+EA ++GL+ Sbjct: 78 LGQFGVIRESFVWPLLREPYVCAVLSLALCTAGYTAEILRGGLMAVPVGQIEAGYSIGLS 137 Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 R V+ P A+R +P +++ + L+K+++LA V ++ V II QT + E+ Sbjct: 138 GFALLRRVIGPIALRQCLPAYSTEAVLLVKSTALASLVTVWEVTGVAQQIIQQTYRTTEV 197 Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIA 393 + IYL L+ ++ + L +++ Sbjct: 198 FVCAALIYLGLNFIVVRLLGALEWRLS 224 >gi|227515553|ref|ZP_03945602.1| glutamate ABC superfamily ATP binding cassette transporter permease protein [Lactobacillus fermentum ATCC 14931] gi|227085983|gb|EEI21295.1| glutamate ABC superfamily ATP binding cassette transporter permease protein [Lactobacillus fermentum ATCC 14931] Length = 227 Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 49/171 (28%), Positives = 94/171 (54%), Gaps = 6/171 (3%) Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287 ++ G P+++ + L Y L L Q +G + IAL + A+ AEI RS Sbjct: 58 IVRGTPSMIQVMLIYYLLARSLPLPQTQILGSGL--DRIIPGAIALGLNSGAYTAEIFRS 115 Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF- 346 G+I++P GQ EA ++LGL+ ++ ++LPQA+R+++P + ++++ L+K SS+ +G Sbjct: 116 GIISIPAGQTEAGLSLGLSQKETMFSIVLPQALRNVLPAMGNEFITLIKESSVLFYIGVQ 175 Query: 347 ---ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394 A+ + VGGT+ N + +I+ + +++ ++ R+ AK L Sbjct: 176 EITAEALGVGGTLYNFIPPLLVAAVIYFILTQAMAQLLGWLERRMGAKYEL 226 Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust. Identities = 17/56 (30%), Positives = 31/56 (55%) Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIV 164 +IG L+ R+S K ++WI R Y+ + R P ++ + +Y + LP+P I+ Sbjct: 32 LIGLLMVLMRMSKVKPISWIARAYIAIVRGTPSMIQVMLIYYLLARSLPLPQTQIL 87 >gi|184155853|ref|YP_001844193.1| glutamate ABC transporter permease component [Lactobacillus fermentum IFO 3956] gi|183227197|dbj|BAG27713.1| glutamate ABC transporter permease component [Lactobacillus fermentum IFO 3956] Length = 229 Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 49/171 (28%), Positives = 94/171 (54%), Gaps = 6/171 (3%) Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287 ++ G P+++ + L Y L L Q +G + IAL + A+ AEI RS Sbjct: 60 IVRGTPSMIQVMLIYYLLARSLPLPQTQILGSGL--DRIIPGAIALGLNSGAYTAEIFRS 117 Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF- 346 G+I++P GQ EA ++LGL+ ++ ++LPQA+R+++P + ++++ L+K SS+ +G Sbjct: 118 GIISIPAGQTEAGLSLGLSQKETMFSIVLPQALRNVLPAMGNEFITLIKESSVLFYIGVQ 177 Query: 347 ---ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394 A+ + VGGT+ N + +I+ + +++ ++ R+ AK L Sbjct: 178 EITAEALGVGGTLYNFIPPLLVAAVIYFILTQAMAQLLGWLERRMGAKYEL 228 Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust. Identities = 17/56 (30%), Positives = 31/56 (55%) Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIV 164 +IG L+ R+S K ++WI R Y+ + R P ++ + +Y + LP+P I+ Sbjct: 34 LIGLLMVLMRMSKVKPISWIARAYIAIVRGTPSMIQVMLIYYLLARSLPLPQTQIL 89 >gi|330875047|gb|EGH09196.1| amino acid ABC transporter permease [Pseudomonas syringae pv. morsprunorum str. M302280PT] gi|330965314|gb|EGH65574.1| amino acid ABC transporter permease [Pseudomonas syringae pv. actinidiae str. M302091] Length = 220 Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 44/129 (34%), Positives = 73/129 (56%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + I L+ + + ++EIVR L A+PRGQ+EA A+GL + R VLLPQAMR I+P Sbjct: 91 FQAGAIGLTLFCGSHVSEIVRGALQAIPRGQIEAGKAIGLRFNQTLRYVLLPQAMRQILP 150 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 + ++K S+L +G A+L+ +I +T +E L F++ ++ I L Sbjct: 151 TWVNSSTEIVKASTLLSVIGVAELLLSTQQVIARTFMTLEFYLFAGFLFFLINYAIELLG 210 Query: 386 NRLNAKIAL 394 ++ ++AL Sbjct: 211 RQIEKRVAL 219 >gi|319650477|ref|ZP_08004617.1| amino acid ABC transporter [Bacillus sp. 2_A_57_CT2] gi|317397658|gb|EFV78356.1| amino acid ABC transporter [Bacillus sp. 2_A_57_CT2] Length = 233 Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 53/200 (26%), Positives = 106/200 (53%), Gaps = 14/200 (7%) Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252 SF+ G+ L++F T L+R K + + +Y+S I G P LV + + + + P +G Sbjct: 42 SFIFGLALAIF-TALARISGNKALETIAGIYVSA--IRGTPLLVQL---FIIFYGLPTIG 95 Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312 + F S I S A+ +EI+R+ ++++P+GQ EA ++G+++ + + Sbjct: 96 --------VIIDPFPSAIIGFSLNVGAYSSEIIRAAILSIPKGQWEAGYSIGMSYSQTLK 147 Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372 ++LPQA R IPPL++ +++L+K++SLA + ++ I + + + F Sbjct: 148 RIILPQASRVSIPPLSNSFISLVKDTSLASMILVTEMFRRAQEIAATNYEFLLLYTQAAF 207 Query: 373 IYLSLSIMIALFMNRLNAKI 392 IY + M+++ RL ++ Sbjct: 208 IYWVICFMLSILQGRLERRL 227 >gi|262173298|ref|ZP_06040975.1| amino acid ABC transporter permease protein [Vibrio mimicus MB-451] gi|261890656|gb|EEY36643.1| amino acid ABC transporter permease protein [Vibrio mimicus MB-451] Length = 265 Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 52/159 (32%), Positives = 85/159 (53%), Gaps = 16/159 (10%) Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVS-PEFM 267 R G+AL YI+ ++ P LV I L Y F+ G + F Sbjct: 89 RQSRSLVGRALGTGYIA--VVRNTPLLVQIYLLY-------------FVFGPVIGLDRFA 133 Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327 + +AL+ + A+ AE+ R GL ++P+GQ EAA +LGL+ + V+LPQ ++ +PPL Sbjct: 134 TAVLALALFQGAYTAEVFRGGLNSIPQGQYEAARSLGLSRFFSFYDVILPQLLQRTLPPL 193 Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 T++ ++L+KNSS+ + DL + G I+++T EI Sbjct: 194 TNEMVSLIKNSSIVSVMAIFDLTTQGRNIVSETAMPFEI 232 >gi|114706426|ref|ZP_01439328.1| polar amino acid ABC transport permease protein aapM-1 [Fulvimarina pelagi HTCC2506] gi|114538287|gb|EAU41409.1| polar amino acid ABC transport permease protein aapM-1 [Fulvimarina pelagi HTCC2506] Length = 497 Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 32/81 (39%), Positives = 59/81 (72%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + ++ + +A++AE+VR GL A+P+GQ E A A+ L++ + TRL++LPQA++ +IP + + Sbjct: 365 VGVALFASAYMAEVVRGGLQAIPKGQYEGADAMALSYWQKTRLIILPQALKIVIPGIVNT 424 Query: 331 YLNLLKNSSLAVAVGFADLVS 351 ++ L K++SL +G ADL+ Sbjct: 425 FIGLFKDTSLVYIIGLADLLG 445 >gi|34556717|ref|NP_906532.1| ABC transporter permease [Wolinella succinogenes DSM 1740] gi|34482431|emb|CAE09432.1| PERMEASE OF ABC TRANSPORTER [Wolinella succinogenes] Length = 321 Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 36/119 (30%), Positives = 73/119 (61%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I+L+ + A+IAE++R + ++ +GQ EAA++LG+ + + L+++PQA++ +P LT + Sbjct: 193 ISLAIFYGAYIAEVLRGAIQSIDKGQQEAALSLGMNYFQTMTLIIIPQALKRSLPSLTGE 252 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 + L+K+SSL + DL VG ++ T E ++ +Y +++ ++L +RL Sbjct: 253 MIALIKDSSLVSVISVTDLTKVGREMVANTFSPFETWIVVAIMYFAITSSLSLLAHRLE 311 >gi|262277192|ref|ZP_06054985.1| ABC transporter permease component [alpha proteobacterium HIMB114] gi|262224295|gb|EEY74754.1| ABC transporter permease component [alpha proteobacterium HIMB114] Length = 243 Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 50/150 (33%), Positives = 82/150 (54%), Gaps = 23/150 (15%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 +A+PLL + ++ +GLP + G + SP F+S IALS Sbjct: 88 RAIPLLVLILWIYYGLPIMT----------------------GISFSP-FVSGIIALSIS 124 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 +AF AEI R+G+ ++ + Q EA +LGL + RLV+LPQA+++I+P + +Q++ +LK Sbjct: 125 ESAFQAEIFRAGINSIKKSQWEAGSSLGLNFYRILRLVILPQAIKNILPAIGNQFVYVLK 184 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 SSL +G DL ++ T + +EI Sbjct: 185 MSSLVSIIGIGDLTRKANELVVTTYRPLEI 214 >gi|227114736|ref|ZP_03828392.1| amino-acid ABC transporter permease protein [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 223 Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 65/221 (29%), Positives = 118/221 (53%), Gaps = 21/221 (9%) Query: 178 FPTLTMDTNAKIFV------FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231 FP + M +F+ F+ VLG++L+L R + LYIS F G Sbjct: 12 FPQVLMYLPTTLFLAVVSMFFAMVLGLILALV-----RESKIVVVVKIVELYISLFR--G 64 Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291 +P+LV + + ++F P L F G S + ++ I S T+A++AEI R+GL + Sbjct: 65 IPSLVQL---FIIYFGLPQL----FPGLSNLDAMTAAI-IGFSLKTSAYMAEIFRAGLAS 116 Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 V GQ EA +++G++ + R ++LPQAM + +P + +++L+K++S+A A+G ++L + Sbjct: 117 VDFGQTEAGLSIGMSKAQVYRRIVLPQAMLNALPATGNTFISLIKDTSVAFALGVSELFA 176 Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 G I ++ + E L+ IY + I+ + +L K+ Sbjct: 177 EGKMIAAESLRFFETFLVVGLIYWLVIIVYSWLQKQLEKKL 217 >gi|205356386|ref|ZP_03223151.1| putative amino-acid ABC tansporter permease protein [Campylobacter jejuni subsp. jejuni CG8421] gi|205345771|gb|EDZ32409.1| putative amino-acid ABC tansporter permease protein [Campylobacter jejuni subsp. jejuni CG8421] Length = 247 Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 38/94 (40%), Positives = 69/94 (73%), Gaps = 5/94 (5%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +AL ++A+IAEIVRSG+ +V +GQMEAA A+GL ++ + + ++LPQA ++I+P L ++ Sbjct: 123 LALGLNSSAYIAEIVRSGINSVDKGQMEAARAMGLDYKTSMKEIILPQATKNILPALANE 182 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364 +++L K +S+ VGF ++ + T+ +Q+ QA+ Sbjct: 183 FISLFKETSV---VGFISVIDI--TMQSQSLQAV 211 >gi|196034602|ref|ZP_03102010.1| glutamine ABC transporter, permease/substrate-binding protein [Bacillus cereus W] gi|228944164|ref|ZP_04106543.1| Amino acid ABC transproter, permease [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|195992645|gb|EDX56605.1| glutamine ABC transporter, permease/substrate-binding protein [Bacillus cereus W] gi|228815553|gb|EEM61795.1| Amino acid ABC transproter, permease [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] Length = 230 Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 49/126 (38%), Positives = 74/126 (58%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IAL+ + A+I EI R + +V RGQMEAA +LG+ + A R ++LPQA R IPPL +Q Sbjct: 89 IALAIHNGAYITEIFRGSIQSVDRGQMEAARSLGMPYPLAMRRIVLPQAFRQSIPPLGNQ 148 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++ LK+SSL VG ++L G +I Q ++ +I YL L ++ +N L Sbjct: 149 FIIGLKDSSLVAYVGLSELWGSGLSIAAGNFQQLDTYIIVGLYYLVLVLLFTYLVNLLEK 208 Query: 391 KIALKE 396 ++ KE Sbjct: 209 RLQRKE 214 >gi|322832078|ref|YP_004212105.1| polar amino acid ABC transporter inner membrane subunit [Rahnella sp. Y9602] gi|321167279|gb|ADW72978.1| polar amino acid ABC transporter, inner membrane subunit [Rahnella sp. Y9602] Length = 219 Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 59/206 (28%), Positives = 109/206 (52%), Gaps = 12/206 (5%) Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248 I V V G+++ + A +R F + L++I LI G P +V + Y F Sbjct: 25 ISVLGLVGGLIIGVIAG-FARAFGGWFSSNVALVFIE--LIRGTPIVVQVMFIY---FAL 78 Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308 P++ + + P F + + + + A+IAEI R ++++ G EA +ALGL+ R Sbjct: 79 PMM-----VPDLRIDP-FSAAVVTIIINSGAYIAEITRGAVLSIHNGFREAGLALGLSRR 132 Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368 R +++P A+R ++PPL +Q++ +K++SL + +G A+L G II +A+EI Sbjct: 133 ATLRYIIMPLALRRMLPPLGNQWIVSIKDTSLFIVIGVAELTRQGQEIIAGNFRAMEIWS 192 Query: 369 IWMFIYLSLSIMIALFMNRLNAKIAL 394 IYL +++ ++ + RL K+ + Sbjct: 193 AVAVIYLIITLALSFVLRRLERKLKI 218 >gi|284032616|ref|YP_003382547.1| polar amino acid ABC transporter inner membrane subunit [Kribbella flavida DSM 17836] gi|283811909|gb|ADB33748.1| polar amino acid ABC transporter, inner membrane subunit [Kribbella flavida DSM 17836] Length = 289 Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 64/210 (30%), Positives = 106/210 (50%), Gaps = 42/210 (20%) Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRH--------FHEKTGKALPLLYISTFLIFGLP 233 T+ V + + G V + A R+S H F + +A+PLL + F +G Sbjct: 69 TLRAAGAATVLALIFGAVFA--AARISDHRWLRVPATFVVELFRAIPLLILMFFFYYG-- 124 Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293 +L+++L +SP F ++ L+ Y + +AEI R+G+ AVP Sbjct: 125 -----SLEFELG----------------LSP-FHAVVFGLTLYNGSVLAEIFRAGIAAVP 162 Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353 +GQ EAA A GL + RLVLLPQA+R+++P + SQ + LLK+++L + + +L+ V Sbjct: 163 KGQREAAYATGLRKNQVVRLVLLPQAIRAMLPAIVSQLVVLLKDTALGFIITYNELLYVA 222 Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 Q G +E + F Y+ I+IA+ Sbjct: 223 ----KQMGGRLE----FGFPYIPTYIVIAV 244 Score = 39.7 bits (91), Expect = 0.79, Method: Compositional matrix adjust. Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 4/87 (4%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G +NT A + + A I G + A R+S ++ + VE+FR IP L+++FF Sbjct: 62 LLTGLLNTLRAAGAATVLALIFGAVFAAARISDHRWLRVPATFVVELFRAIPLLILMFFF 121 Query: 149 YKSVL--SVLPIPDHSIVLPFGMFLNN 173 Y L + P H++V FG+ L N Sbjct: 122 YYGSLEFELGLSPFHAVV--FGLTLYN 146 >gi|159186075|ref|NP_356420.2| ABC transporter, membrane spanning protein (amino acid) [Agrobacterium tumefaciens str. C58] gi|159141209|gb|AAK89205.2| ABC transporter, membrane spanning protein (amino acid) [Agrobacterium tumefaciens str. C58] Length = 197 Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 42/124 (33%), Positives = 71/124 (57%) Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327 S I LS AA+++EIVR+G+ AVP+GQ+ AA A+G+T + R ++ PQA R IIPPL Sbjct: 61 STLIGLSLCEAAYLSEIVRAGIAAVPKGQINAARAIGMTEAQVMRYIVAPQAFRIIIPPL 120 Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387 + +LK +S+A + +L+ +I + +E+ + YL+++ L R Sbjct: 121 GNSVNGVLKTTSIASIISMEELLRRTQVLIQEKFLVLELFTVAALYYLAMTTAWELIQRR 180 Query: 388 LNAK 391 + + Sbjct: 181 IEKR 184 >gi|146340848|ref|YP_001205896.1| putative amino acid ABC transport, permease [Bradyrhizobium sp. ORS278] gi|146193654|emb|CAL77671.1| putative amino acid ABC transport, permease protein [Bradyrhizobium sp. ORS278] Length = 506 Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 35/81 (43%), Positives = 57/81 (70%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I ++ ++ A++AE++R GL A+PRGQ EAA ALGL+ K T ++LPQA+R +IP + + Sbjct: 374 IGVALFSGAYMAEVIRGGLQAIPRGQAEAASALGLSWWKTTSFIVLPQALRHVIPGIVNS 433 Query: 331 YLNLLKNSSLAVAVGFADLVS 351 +++L K++SL V DL+ Sbjct: 434 FISLFKDTSLVSIVALFDLLG 454 >gi|317970285|ref|ZP_07971675.1| polar amino acid ABC transporter, inner membrane subunit [Synechococcus sp. CB0205] Length = 403 Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 67/216 (31%), Positives = 108/216 (50%), Gaps = 28/216 (12%) Query: 167 FGMFLNNRGLSFPT----------LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTG 216 GM L GL P LT+ + + F LG++L+L R Sbjct: 173 LGMTLIAGGLGLPVVSPSRWGGLLLTLIEASFAILLCFPLGVLLAL-----GRRSRLPLL 227 Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 + L +LYI I G P + L L + +LG GG + + + ++ L+ + Sbjct: 228 RWLSVLYIE--FIRGAPLITL------LFLGQNILGLL-LPGGFSPDRVWRAAWV-LTFF 277 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 AA++AE VRSGL+A+P GQMEAA ALGL +A V+LPQA+R +P + Q++NLL+ Sbjct: 278 AAAYVAEAVRSGLVALPPGQMEAARALGLPVHQAMLKVVLPQALRVALPAMVGQFINLLQ 337 Query: 337 NSSLAVAVGFADLVSVGGTIINQT---GQAIEIILI 369 +++L +G +L+ ++ G+ E+ L+ Sbjct: 338 DTTLLSLIGLFELLGTARAVMANPAFLGKDAEVYLV 373 >gi|206974269|ref|ZP_03235186.1| glutamine ABC transporter, permease/substrate-binding protein [Bacillus cereus H3081.97] gi|217957949|ref|YP_002336493.1| glutamine ABC transporter, permease/substrate-binding protein [Bacillus cereus AH187] gi|229137212|ref|ZP_04265829.1| Amino acid ABC transproter, permease [Bacillus cereus BDRD-ST26] gi|206747509|gb|EDZ58899.1| glutamine ABC transporter, permease/substrate-binding protein [Bacillus cereus H3081.97] gi|217064262|gb|ACJ78512.1| glutamine ABC transporter, permease/substrate-binding protein [Bacillus cereus AH187] gi|228646207|gb|EEL02424.1| Amino acid ABC transproter, permease [Bacillus cereus BDRD-ST26] Length = 230 Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 49/126 (38%), Positives = 74/126 (58%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IAL+ + A+I EI R + +V RGQMEAA +LG+ + A R ++LPQA R IPPL +Q Sbjct: 89 IALAIHNGAYITEIFRGSIQSVDRGQMEAARSLGMPYPLAMRRIVLPQAFRQSIPPLGNQ 148 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++ LK+SSL VG ++L G +I Q ++ +I YL L ++ +N L Sbjct: 149 FIIGLKDSSLVAYVGLSELWGSGLSIAAGNFQQLDTYIIVGLYYLVLVLLFTYLVNLLEK 208 Query: 391 KIALKE 396 ++ KE Sbjct: 209 RLQRKE 214 >gi|147921223|ref|YP_684965.1| ABC-type glutamate import system, permease component [uncultured methanogenic archaeon RC-I] gi|110620361|emb|CAJ35639.1| ABC-type glutamate import system, permease component [uncultured methanogenic archaeon RC-I] Length = 440 Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 44/155 (28%), Positives = 90/155 (58%), Gaps = 1/155 (0%) Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 ++F P L Q + GGS F + +ALS + A++AEI ++G+ A+ +GQMEAA +L Sbjct: 270 VNFGLPFLIQ-DLTGGSFNIDGFTACIVALSMNSGAYMAEIFKAGIEAIHKGQMEAARSL 328 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363 G++H +A ++LPQA + ++P L ++++ L+K+SS+ + + ++++ T+ + Sbjct: 329 GMSHYQAMTFIILPQAFKIVLPALGNEFIALIKDSSIGLVISVSEVLWWSKTVGAEHYNT 388 Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 +L +YL ++I + + + K + +K Sbjct: 389 FTPLLAAGLVYLCITIPLGRIVQYMEKKYNVNARK 423 >gi|83592632|ref|YP_426384.1| amino acid ABC transporter permease [Rhodospirillum rubrum ATCC 11170] gi|83575546|gb|ABC22097.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Rhodospirillum rubrum ATCC 11170] Length = 218 Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 46/111 (41%), Positives = 65/111 (58%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P M+ AL + A+++EI R L A+PRGQ EAA+ALG + R +LLPQA R Sbjct: 84 PALMAAIGALGLASGAYVSEIYRGSLNAIPRGQGEAALALGFSGGSIWRRILLPQAFRLS 143 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374 +P L ++ + LLK SSL +G A+L V T+ T +A+EI + IY Sbjct: 144 VPALVNELILLLKASSLISVIGVAELTRVSQTVSASTYRALEIYMAAGVIY 194 Score = 40.4 bits (93), Expect = 0.56, Method: Compositional matrix adjust. Identities = 20/52 (38%), Positives = 31/52 (59%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140 +L G +T ++ G++ +IG LV GRLS N+L+ I +YV FR +P Sbjct: 13 LLKGAGSTIAISLVGILLGQVIGALVCVGRLSGNRLIDAIGALYVSFFRGVP 64 >gi|33603521|ref|NP_891081.1| glutamate/aspartate transport system permease protein [Bordetella bronchiseptica RB50] gi|33577645|emb|CAE34910.1| glutamate/aspartate transport system permease protein [Bordetella bronchiseptica RB50] Length = 253 Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 45/129 (34%), Positives = 74/129 (57%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+ + L YT++ +AE VR+G+ + P GQ AA ALG+ + R VLLP + R I+P Sbjct: 109 FIPAVLCLGFYTSSRVAEQVRAGIESRPAGQRMAATALGMRPSQVYRYVLLPTSFRIILP 168 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PLTS+ LNL+KN+S+A +G +LV ++ + Q E Y L++++ M Sbjct: 169 PLTSELLNLIKNTSVAFTIGLLELVGAARSMQEFSFQVFEAFAGATLCYFLLNLIVLRAM 228 Query: 386 NRLNAKIAL 394 + ++A+ Sbjct: 229 RYIETRLAV 237 Score = 43.5 bits (101), Expect = 0.065, Method: Compositional matrix adjust. Identities = 33/91 (36%), Positives = 44/91 (48%), Gaps = 4/91 (4%) Query: 85 YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144 Y +L G T A I A IG +VG R + +K + YVE FRNIP LV Sbjct: 20 YLGTLLTGMAWTLGTAALAWILALGIGIVVGVARTTQSKWARIMGATYVEFFRNIPLLVQ 79 Query: 145 IFFLYKSVLSVLPI----PDHSIVLPFGMFL 171 +F Y V +LP+ SI P+G+F+ Sbjct: 80 MFLWYFVVPEILPVQLGDAIKSIPPPWGIFI 110 >gi|17986396|ref|NP_539030.1| asparagine transport system permease protein [Brucella melitensis bv. 1 str. 16M] gi|23502804|ref|NP_698931.1| amino acid ABC transporter permease [Brucella suis 1330] gi|62290806|ref|YP_222599.1| amino acid ABC transporter permease [Brucella abortus bv. 1 str. 9-941] gi|82700716|ref|YP_415290.1| binding-protein dependent transport system inner membrane protein [Brucella melitensis biovar Abortus 2308] gi|161619873|ref|YP_001593760.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Brucella canis ATCC 23365] gi|189025022|ref|YP_001935790.1| Binding-protein-dependent transport systems inner membrane component [Brucella abortus S19] gi|225628153|ref|ZP_03786188.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family protein [Brucella ceti str. Cudo] gi|225853391|ref|YP_002733624.1| His/Glu/Gln/Arg/opine family amino acid ABC transporter permease [Brucella melitensis ATCC 23457] gi|237816316|ref|ZP_04595309.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Brucella abortus str. 2308 A] gi|254690094|ref|ZP_05153348.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family protein [Brucella abortus bv. 6 str. 870] gi|254694582|ref|ZP_05156410.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family protein [Brucella abortus bv. 3 str. Tulya] gi|254696207|ref|ZP_05158035.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family protein [Brucella abortus bv. 2 str. 86/8/59] gi|254700594|ref|ZP_05162422.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family protein [Brucella suis bv. 5 str. 513] gi|254704964|ref|ZP_05166792.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family protein [Brucella suis bv. 3 str. 686] gi|254707523|ref|ZP_05169351.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family protein [Brucella pinnipedialis M163/99/10] gi|254708941|ref|ZP_05170752.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family protein [Brucella pinnipedialis B2/94] gi|254731125|ref|ZP_05189703.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family protein [Brucella abortus bv. 4 str. 292] gi|256030467|ref|ZP_05444081.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family protein [Brucella pinnipedialis M292/94/1] gi|256045555|ref|ZP_05448438.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family protein [Brucella melitensis bv. 1 str. Rev.1] gi|256158451|ref|ZP_05456349.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family protein [Brucella ceti M490/95/1] gi|256253871|ref|ZP_05459407.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family protein [Brucella ceti B1/94] gi|256258347|ref|ZP_05463883.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family protein [Brucella abortus bv. 9 str. C68] gi|256263128|ref|ZP_05465660.1| binding-protein-dependent transport system inner membrane component [Brucella melitensis bv. 2 str. 63/9] gi|260169375|ref|ZP_05756186.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family protein [Brucella sp. F5/99] gi|260546068|ref|ZP_05821808.1| binding-protein-dependent transport system inner membrane component [Brucella abortus NCTC 8038] gi|260562865|ref|ZP_05833351.1| binding-protein-dependent transport system inner membrane component [Brucella melitensis bv. 1 str. 16M] gi|260567563|ref|ZP_05838033.1| binding-protein-dependent transport system inner membrane component [Brucella suis bv. 4 str. 40] gi|260755632|ref|ZP_05867980.1| ABC transporter [Brucella abortus bv. 6 str. 870] gi|260758857|ref|ZP_05871205.1| ABC transporter [Brucella abortus bv. 4 str. 292] gi|260760581|ref|ZP_05872924.1| ABC transporter [Brucella abortus bv. 2 str. 86/8/59] gi|260884657|ref|ZP_05896271.1| ABC transporter [Brucella abortus bv. 9 str. C68] gi|261214906|ref|ZP_05929187.1| amino acid ABC transporter, permease [Brucella abortus bv. 3 str. Tulya] gi|261221007|ref|ZP_05935288.1| ABC transporter [Brucella ceti B1/94] gi|261315004|ref|ZP_05954201.1| ABC transporter [Brucella pinnipedialis M163/99/10] gi|261316439|ref|ZP_05955636.1| ABC transporter [Brucella pinnipedialis B2/94] gi|261751102|ref|ZP_05994811.1| ABC transporter [Brucella suis bv. 5 str. 513] gi|261755664|ref|ZP_05999373.1| ABC transporter [Brucella suis bv. 3 str. 686] gi|261758896|ref|ZP_06002605.1| binding-protein-dependent transport system inner membrane component [Brucella sp. F5/99] gi|265987509|ref|ZP_06100066.1| ABC transporter [Brucella pinnipedialis M292/94/1] gi|265991982|ref|ZP_06104539.1| amino acid ABC transporter permease [Brucella melitensis bv. 1 str. Rev.1] gi|265996967|ref|ZP_06109524.1| ABC transporter [Brucella ceti M490/95/1] gi|297247190|ref|ZP_06930908.1| polar amino acid transport system permease [Brucella abortus bv. 5 str. B3196] gi|17981988|gb|AAL51294.1| asparagine transport system permease protein [Brucella melitensis bv. 1 str. 16M] gi|23348827|gb|AAN30846.1| amino acid ABC transporter, permease protein [Brucella suis 1330] gi|62196938|gb|AAX75238.1| amino acid ABC transporter, permease protein [Brucella abortus bv. 1 str. 9-941] gi|82616817|emb|CAJ11912.1| Binding-protein-dependent transport systems inner membrane component [Brucella melitensis biovar Abortus 2308] gi|161336684|gb|ABX62989.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Brucella canis ATCC 23365] gi|189020594|gb|ACD73316.1| Binding-protein-dependent transport systems inner membrane component [Brucella abortus S19] gi|225616978|gb|EEH14025.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family protein [Brucella ceti str. Cudo] gi|225641756|gb|ACO01670.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family protein [Brucella melitensis ATCC 23457] gi|237788383|gb|EEP62598.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Brucella abortus str. 2308 A] gi|260096175|gb|EEW80051.1| binding-protein-dependent transport system inner membrane component [Brucella abortus NCTC 8038] gi|260152881|gb|EEW87973.1| binding-protein-dependent transport system inner membrane component [Brucella melitensis bv. 1 str. 16M] gi|260157081|gb|EEW92161.1| binding-protein-dependent transport system inner membrane component [Brucella suis bv. 4 str. 40] gi|260669175|gb|EEX56115.1| ABC transporter [Brucella abortus bv. 4 str. 292] gi|260671013|gb|EEX57834.1| ABC transporter [Brucella abortus bv. 2 str. 86/8/59] gi|260675740|gb|EEX62561.1| ABC transporter [Brucella abortus bv. 6 str. 870] gi|260874185|gb|EEX81254.1| ABC transporter [Brucella abortus bv. 9 str. C68] gi|260916513|gb|EEX83374.1| amino acid ABC transporter, permease [Brucella abortus bv. 3 str. Tulya] gi|260919591|gb|EEX86244.1| ABC transporter [Brucella ceti B1/94] gi|261295662|gb|EEX99158.1| ABC transporter [Brucella pinnipedialis B2/94] gi|261304030|gb|EEY07527.1| ABC transporter [Brucella pinnipedialis M163/99/10] gi|261738880|gb|EEY26876.1| binding-protein-dependent transport system inner membrane component [Brucella sp. F5/99] gi|261740855|gb|EEY28781.1| ABC transporter [Brucella suis bv. 5 str. 513] gi|261745417|gb|EEY33343.1| ABC transporter [Brucella suis bv. 3 str. 686] gi|262551435|gb|EEZ07425.1| ABC transporter [Brucella ceti M490/95/1] gi|263003048|gb|EEZ15341.1| amino acid ABC transporter permease [Brucella melitensis bv. 1 str. Rev.1] gi|263093030|gb|EEZ17180.1| binding-protein-dependent transport system inner membrane component [Brucella melitensis bv. 2 str. 63/9] gi|264659706|gb|EEZ29967.1| ABC transporter [Brucella pinnipedialis M292/94/1] gi|297174359|gb|EFH33706.1| polar amino acid transport system permease [Brucella abortus bv. 5 str. B3196] gi|326409954|gb|ADZ67019.1| Binding-protein-dependent transport systems inner membrane component [Brucella melitensis M28] gi|326539670|gb|ADZ87885.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family protein [Brucella melitensis M5-90] Length = 240 Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 49/168 (29%), Positives = 90/168 (53%), Gaps = 8/168 (4%) Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279 PL +IS+ + + I + Y + P +G PE + IAL+ + ++ Sbjct: 50 PLRWISSAYVEWFRNIPFIVVLYLFFYGLPFMG--------VRLPESIVGTIALAFFASS 101 Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339 + AEI+R ++AVP+GQMEAA A+G+++ + ++ PQ +R ++PP T+ ++++K +S Sbjct: 102 YFAEIIRGAILAVPKGQMEAARAIGMSYFQGLYEIVAPQTVRLLLPPSTNTSISMVKETS 161 Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387 + + A+L G I +T EI L IY ++ + A M+R Sbjct: 162 VLSTITVAELTYQGLVIQGETFAPFEIFLTTAAIYWMITAIFAYLMHR 209 >gi|322386833|ref|ZP_08060457.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus cristatus ATCC 51100] gi|321269115|gb|EFX52051.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus cristatus ATCC 51100] Length = 542 Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 42/119 (35%), Positives = 69/119 (57%) Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 +S T A+++EIVR G+ AV +GQ EAA ALG+TH + R V+LPQ +R+I+P ++++ Sbjct: 404 VSINTGAYMSEIVRGGIFAVDKGQFEAATALGMTHGQTMRKVVLPQVVRNILPATGNEFV 463 Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 +K++S+ + +L G TI QT Q + I IY L+ + + + K Sbjct: 464 INIKDTSVLNVISVVELYFSGNTIATQTYQYFQTFTIIAVIYFVLTFTVTRILRFIEQK 522 >gi|271964435|ref|YP_003338631.1| amino acid ABC transporter permease [Streptosporangium roseum DSM 43021] gi|270507610|gb|ACZ85888.1| amino acid ABC transporter, permease protein [Streptosporangium roseum DSM 43021] Length = 332 Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 70/219 (31%), Positives = 112/219 (51%), Gaps = 22/219 (10%) Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL------YISTF----LIFG 231 T++ A F F+LG VL+L R+S A PLL YI+ F LI Sbjct: 117 TLELTALGIGFGFLLGTVLALM--RMS---------ANPLLSSVAWGYIALFRSIPLILQ 165 Query: 232 LPTLVLIALKY-QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290 L +AL Y +L F P F IG + + + L+ + AA+ AEIVR+GL+ Sbjct: 166 LLFWYNLALLYPRLSFGVPFGPSFFDIGTMDLIGPVTAAALGLALHQAAYAAEIVRAGLL 225 Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 +V GQ EAA ALG+ + ++LPQAMRSI+P ++ + L+K +S+ + +L Sbjct: 226 SVDHGQREAAAALGIPRSRQLFRIVLPQAMRSIVPTAGNEIIGLVKGTSMVYIMALPELF 285 Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 I N+ G+ I ++L+ YL ++ ++++ + L Sbjct: 286 YQVQVIYNRNGRVIALLLVATIWYLVMTTVLSVVQHYLE 324 >gi|256375587|ref|YP_003099247.1| polar amino acid ABC transporter, inner membrane subunit [Actinosynnema mirum DSM 43827] gi|255919890|gb|ACU35401.1| polar amino acid ABC transporter, inner membrane subunit [Actinosynnema mirum DSM 43827] Length = 215 Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 37/83 (44%), Positives = 56/83 (67%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F ++L+ YT+AFI E++RSG+ VP GQ EA+ ALGL+ + V+LPQA+R+++P Sbjct: 85 FKGAVVSLTVYTSAFICEVIRSGINTVPVGQAEASRALGLSFGQMLGNVVLPQALRTVVP 144 Query: 326 PLTSQYLNLLKNSSLAVAVGFAD 348 PL S + LLKN+++A D Sbjct: 145 PLASTMIALLKNTTIAAGFSVGD 167 >gi|182439547|ref|YP_001827266.1| putative ABC transporter permease protein [Streptomyces griseus subsp. griseus NBRC 13350] gi|326780211|ref|ZP_08239476.1| polar amino acid ABC transporter, inner membrane subunit [Streptomyces cf. griseus XylebKG-1] gi|178468063|dbj|BAG22583.1| putative ABC transporter permease protein [Streptomyces griseus subsp. griseus NBRC 13350] gi|326660544|gb|EGE45390.1| polar amino acid ABC transporter, inner membrane subunit [Streptomyces cf. griseus XylebKG-1] Length = 288 Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 48/143 (33%), Positives = 87/143 (60%), Gaps = 7/143 (4%) Query: 255 NFIGGSTVS---PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311 +G STVS P +++ I L+ + AA+ AE+VR G+++V RGQ+EAA +LGL + Sbjct: 141 QILGVSTVSLLGPVTIAV-IGLTLHEAAYAAEVVRGGILSVERGQVEAAQSLGLGPWRRF 199 Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371 R ++LPQAMRSI+PP + + LK +S+ + DL+ + ++T Q I ++L+ Sbjct: 200 RRIVLPQAMRSIVPPAGNMLIGTLKGTSIVSIIAVQDLLYSVQLVYHRTYQVIPLLLVAT 259 Query: 372 FIYLSLSIMIAL---FMNRLNAK 391 Y +++ ++++ ++ R A+ Sbjct: 260 LWYAAVTTLLSIGQRYVERYYAR 282 >gi|149376722|ref|ZP_01894480.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Marinobacter algicola DG893] gi|149358961|gb|EDM47427.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Marinobacter algicola DG893] Length = 361 Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 41/125 (32%), Positives = 77/125 (61%), Gaps = 3/125 (2%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I ++ + +A++AE++R GL A+PRGQ EAA ALGL + K L++LPQA++ +IP + + Sbjct: 231 IGITLWQSAYMAEVIRGGLQAIPRGQYEAASALGLGYWKKMGLIILPQALKLVIPGIVNT 290 Query: 331 YLNLLKNSSLAVAVGFADLV-SVGGTIINQTGQ--AIEIILIWMFIYLSLSIMIALFMNR 387 +++L K+++L + +G D++ +V T+ + Q A+E + F + I+ + Sbjct: 291 FISLFKDTTLVLIIGLFDILGTVQSTVTDPAWQNVAVEGYVFVAFCFWVFCFGISRYSQN 350 Query: 388 LNAKI 392 L K+ Sbjct: 351 LERKL 355 Score = 39.7 bits (91), Expect = 0.83, Method: Compositional matrix adjust. Identities = 25/69 (36%), Positives = 42/69 (60%), Gaps = 2/69 (2%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151 G + T LA+ G+I + IGTL+ GR S ++ +C V++EV+R +P + V+F S Sbjct: 153 GLMLTLILAYIGIIASLPIGTLLALGRRSEMPIIRGLCVVFIEVWRAVPLITVLFM--AS 210 Query: 152 VLSVLPIPD 160 V+ L +P+ Sbjct: 211 VMLPLFLPE 219 >gi|33598572|ref|NP_886215.1| glutamate/aspartate transport system permease protein [Bordetella parapertussis 12822] gi|33574701|emb|CAE39358.1| glutamate/aspartate transport system permease protein [Bordetella parapertussis] Length = 228 Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 47/162 (29%), Positives = 86/162 (53%), Gaps = 1/162 (0%) Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVS-PEFMSLYIALSCYTAAFIAEIVRSGL 289 GL L LI + + +F P +G + G + F S I + + AA+ EI+R+G+ Sbjct: 62 GLRALPLILVIFWFYFLVPYIGGWLTGAGRPLQVGGFTSALITFTLFEAAYFCEIMRAGI 121 Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349 ++PRGQ AA A+GL + + V+LPQA+R++ P L +Q + L +++SL + D Sbjct: 122 QSIPRGQTSAAYAIGLNYWQTMAYVVLPQALRNMAPVLLTQTIVLFQDTSLVYVLSLTDF 181 Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 + G + + + +E+ L +Y +S + F++ L + Sbjct: 182 LGAGINVAQRDNRLVEMYLFVAAVYFVMSFAASRFVHYLQQR 223 >gi|153011130|ref|YP_001372344.1| polar amino acid ABC transporter, inner membrane subunit [Ochrobactrum anthropi ATCC 49188] gi|151563018|gb|ABS16515.1| polar amino acid ABC transporter, inner membrane subunit [Ochrobactrum anthropi ATCC 49188] Length = 226 Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 41/126 (32%), Positives = 76/126 (60%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + I S A+ +EI+R+ + AVP+GQ EAA ++G++ R+A +LPQA R+ +P Sbjct: 89 FPAAVIGFSLSVGAYSSEIIRAVISAVPKGQWEAAYSIGMSWRQALARTILPQATRTAVP 148 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PL++ +++L+K++SLA A+ +L I+ T + + + + IYL +S +++ Sbjct: 149 PLSNSFISLVKDTSLAAAITVPELFQSAQRIVATTYEPLILYIEAALIYLVMSSVLSALQ 208 Query: 386 NRLNAK 391 RL + Sbjct: 209 VRLEKR 214 >gi|153009882|ref|YP_001371097.1| polar amino acid ABC transporter inner membrane subunit [Ochrobactrum anthropi ATCC 49188] gi|151561770|gb|ABS15268.1| polar amino acid ABC transporter, inner membrane subunit [Ochrobactrum anthropi ATCC 49188] Length = 385 Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 34/82 (41%), Positives = 59/82 (71%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I ++ + +A++AE+VR GL A+PRGQ E A ALGL++ + T L++LPQA++ +IP + + Sbjct: 253 IGVALFASAYMAEVVRGGLQAIPRGQYEGADALGLSYWQKTGLIVLPQALKLVIPGIVNT 312 Query: 331 YLNLLKNSSLAVAVGFADLVSV 352 ++ L K++SL +G DL+ + Sbjct: 313 FIGLFKDTSLVYIIGMFDLLGI 334 >gi|186473670|ref|YP_001861012.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia phymatum STM815] gi|184196002|gb|ACC73966.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia phymatum STM815] Length = 219 Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 48/150 (32%), Positives = 84/150 (56%), Gaps = 3/150 (2%) Query: 250 VLGQFNFIGGSTVS---PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306 +L QF + G V F+S +AL+ TAA+ +EI+R+GL++VP GQ EAA A+GL Sbjct: 69 ILLQFFYFGLPAVHITLSSFVSSTLALAWCTAAYTSEIIRAGLLSVPHGQREAAYAIGLK 128 Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 +L++LPQ +R +PPL L +L+ +SL V +LV+ I T +++ Sbjct: 129 EVDTLKLIILPQGLRVSVPPLLGFALVMLQATSLCFTVALPELVTRANQIGTGTFLYMQV 188 Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 + + +Y ++ + L ++ + ++A E Sbjct: 189 LTLTALLYAAICLPSTLLVSSIERRLARHE 218 >gi|55378504|ref|YP_136354.1| glutamine ABC transporter permease protein [Haloarcula marismortui ATCC 43049] gi|55231229|gb|AAV46648.1| glutamine ABC transporter permease protein [Haloarcula marismortui ATCC 43049] Length = 226 Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 44/125 (35%), Positives = 76/125 (60%), Gaps = 2/125 (1%) Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315 F G S S F++ IAL +AA+ ++I R L +V GQ+EAA A+G+ +A R V+ Sbjct: 80 FFGLSVSSSAFVTATIALGLRSAAYQSQIFRGALQSVDEGQLEAARAVGMGRLQAIRSVV 139 Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN--QTGQAIEIILIWMFI 373 +PQA+R +P +++ +LK++S+A+ +G +L+++G + Q+ A+EI L I Sbjct: 140 VPQALRRSVPGFQNEFTIVLKDTSIAIVIGLGELLTIGQNLYQGGQSTAALEIFLTVSLI 199 Query: 374 YLSLS 378 Y L+ Sbjct: 200 YFVLT 204 >gi|116251958|ref|YP_767796.1| general L-amino acid transport system permease protein [Rhizobium leguminosarum bv. viciae 3841] gi|3182889|sp|Q52814|AAPM_RHIL3 RecName: Full=General L-amino acid transport system permease protein AapM gi|1154896|emb|CAA57935.1| general amino acid ABC type transporter [Rhizobium leguminosarum] gi|115256606|emb|CAK07694.1| General L-amino acid transport system permease protein [Rhizobium leguminosarum bv. viciae 3841] Length = 384 Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 32/82 (39%), Positives = 59/82 (71%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I +S +T+A++AE++R GL A+P+GQ E A +LGL + + TRL+++PQA++ +IP + + Sbjct: 252 IGVSIFTSAYMAEVIRGGLQAIPKGQFEGADSLGLGYWQKTRLIIMPQAIKLVIPSIVNT 311 Query: 331 YLNLLKNSSLAVAVGFADLVSV 352 ++ K++SL +G DL+ + Sbjct: 312 FIGTFKDTSLVTIIGMFDLLGI 333 >gi|282917762|ref|ZP_06325512.1| polar amino acid transport system permease [Staphylococcus aureus subsp. aureus D139] gi|283767496|ref|ZP_06340411.1| polar amino acid transport system permease [Staphylococcus aureus subsp. aureus H19] gi|282318047|gb|EFB48407.1| polar amino acid transport system permease [Staphylococcus aureus subsp. aureus D139] gi|283461375|gb|EFC08459.1| polar amino acid transport system permease [Staphylococcus aureus subsp. aureus H19] Length = 239 Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 51/155 (32%), Positives = 96/155 (61%), Gaps = 10/155 (6%) Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248 I + +F LG++++LF T L R K +++ +Y+S +I G P +V + + + + Sbjct: 34 ITLVTFALGLIIALF-TALMRISTSKILRSISRVYVS--IIRGTPMIVQL---FIIFYGI 87 Query: 249 PVLGQF---NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305 P LG+ + T++P ++ I LS A+ +EI+R G+I++P+GQ EAA ++G+ Sbjct: 88 PELGRLLTNDADNQWTLAPVVAAI-IGLSLNVGAYASEIIRGGIISIPKGQTEAAYSIGM 146 Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340 T+ + + ++LPQA+R IP L + +L+L+K++SL Sbjct: 147 TYGQTIQRIILPQAIRVSIPALGNTFLSLIKDTSL 181 >gi|190893857|ref|YP_001980399.1| probable amino acid ABC transporter, permease protein [Rhizobium etli CIAT 652] gi|190699136|gb|ACE93221.1| probable amino acid ABC transporter, permease protein [Rhizobium etli CIAT 652] Length = 219 Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 59/206 (28%), Positives = 112/206 (54%), Gaps = 20/206 (9%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF---GLPTLVLIALKYQLHFD 247 + SF G++L L T ++R F G A P++ ++ F ++ G P LV + + + + Sbjct: 21 LLSFTFGLILGLI-TAIARLF----GPA-PVVVVARFYVWVIRGTPLLVQL---FVIFYG 71 Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307 P +G + F + I + A+ +EI+R+ + +VP+GQ EAA ++G++ Sbjct: 72 LPSIG--------ILLDAFPAALIGFTLNIGAYSSEIIRAVISSVPKGQWEAAYSIGMSW 123 Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367 R+A +LPQA R +PPL++ +++L+K++SLA A+ +L I+ T + + + Sbjct: 124 RQAMSRTILPQAGRVAVPPLSNTFISLVKDTSLAAAITVPELFQAAQRIVATTYEPLILY 183 Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIA 393 + IYL+LS +++ RL + A Sbjct: 184 IEAALIYLALSSILSQLQVRLERRFA 209 >gi|241204486|ref|YP_002975582.1| polar amino acid ABC transcriptional regulator inner membrane protein [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240858376|gb|ACS56043.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 384 Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 32/82 (39%), Positives = 59/82 (71%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I +S +T+A++AE++R GL A+P+GQ E A +LGL + + TRL+++PQA++ +IP + + Sbjct: 252 IGVSIFTSAYMAEVIRGGLQAIPKGQFEGADSLGLGYWQKTRLIIMPQAIKLVIPSIVNT 311 Query: 331 YLNLLKNSSLAVAVGFADLVSV 352 ++ K++SL +G DL+ + Sbjct: 312 FIGTFKDTSLVTIIGMFDLLGI 333 >gi|89068767|ref|ZP_01156153.1| putative amino acid uptake ABC transporter permease protein [Oceanicola granulosus HTCC2516] gi|89045730|gb|EAR51792.1| putative amino acid uptake ABC transporter permease protein [Oceanicola granulosus HTCC2516] Length = 537 Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 52/134 (38%), Positives = 79/134 (58%), Gaps = 9/134 (6%) Query: 220 PLLYISTFLI---FGLPTLVLIALKYQLHFDKPVLGQF-NFIGGSTVSPEFMSLYIALSC 275 PL S FLI G+P LV+I L+ P+ G + GG P + IA++ Sbjct: 361 PLSVASEFLIDTLRGIPMLVII-----LYIGLPLAGVVKSSTGGFIDPPNMLRGIIAMAI 415 Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335 +A++AEI R+G+ AVP GQ+EAA +LGL+ R V+LPQA R +IPP+ ++++ +L Sbjct: 416 AYSAYLAEIFRAGINAVPTGQIEAARSLGLSRWSTARHVILPQAFRIVIPPMGNEFIAIL 475 Query: 336 KNSSLAVAVGFADL 349 K++SL + DL Sbjct: 476 KDTSLLSILSIRDL 489 >gi|315502594|ref|YP_004081481.1| polar amino acid abc transporter, inner membrane subunit [Micromonospora sp. L5] gi|315409213|gb|ADU07330.1| polar amino acid ABC transporter, inner membrane subunit [Micromonospora sp. L5] Length = 291 Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 39/92 (42%), Positives = 61/92 (66%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 +F +L I L+ Y + +AEI R+G+ AVP GQ E A A+G+ + RL+LLPQA RS++ Sbjct: 136 KFWALVIGLTLYNGSVLAEIFRAGINAVPYGQSEGAYAIGMRKNQVLRLILLPQAFRSML 195 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356 P + SQ + LLK+++L + + +L+ VG I Sbjct: 196 PAIVSQLVVLLKDTALGFIITYPELLFVGKQI 227 >gi|21224120|ref|NP_629899.1| glutamate permease [Streptomyces coelicolor A3(2)] gi|2687339|emb|CAA15880.1| glutamate permease [Streptomyces coelicolor A3(2)] Length = 299 Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 67/221 (30%), Positives = 114/221 (51%), Gaps = 23/221 (10%) Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALK 241 T+ A V + LG VL + RLS H + +P+ + F +P LVL+ Sbjct: 71 TLKAAALSMVIALPLGAVLGI--ARLSDHAWVR----IPVAIVVEFF-RSIPVLVLM--- 120 Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLY---IALSCYTAAFIAEIVRSGLIAVPRGQME 298 + G F + VS + LY L Y A+ +AEIVR+G++A+P+GQ E Sbjct: 121 --------IFGLALFAEYTDVSSDDRPLYAVVTGLVLYNASVLAEIVRAGILALPKGQAE 172 Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV-GFADLVSVGGTII 357 A+A+GL ++ RL+LLPQA+ +++P + SQ + +LK+++L AV F +L++ T+ Sbjct: 173 GAMAIGLRKGQSMRLILLPQAVTTMLPAIVSQLVVILKDTALGGAVLTFPELLASANTMS 232 Query: 358 NQTG-QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 G I + IY++L+ + F + L ++ +K Sbjct: 233 GYYGANVIASFTVVAVIYIALNFSLTTFASWLERRLRRAKK 273 Score = 44.3 bits (103), Expect = 0.032, Method: Compositional matrix adjust. Identities = 29/84 (34%), Positives = 44/84 (52%) Query: 64 LSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK 123 L E+ E + + +TSD ++T I G NT A M+ A +G ++G RLS + Sbjct: 39 LDEKGQLEWAKWQMFFTSDEPWSTYIWPGLQNTLKAAALSMVIALPLGAVLGIARLSDHA 98 Query: 124 LVAWICRVYVEVFRNIPPLVVIFF 147 V + VE FR+IP LV++ F Sbjct: 99 WVRIPVAIVVEFFRSIPVLVLMIF 122 >gi|325963973|ref|YP_004241879.1| amino acid ABC transporter membrane protein, PAAT family [Arthrobacter phenanthrenivorans Sphe3] gi|323470060|gb|ADX73745.1| amino acid ABC transporter membrane protein, PAAT family [Arthrobacter phenanthrenivorans Sphe3] Length = 254 Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 46/134 (34%), Positives = 84/134 (62%), Gaps = 7/134 (5%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +AL+ AA+I EI RSG+ +V +GQ+EA+ ALG ++ + RLV++PQ +R ++P L +Q Sbjct: 107 LALTLIAAAYIGEIFRSGIQSVEKGQLEASRALGFSYGSSMRLVVVPQGIRRVLPALVNQ 166 Query: 331 YLNLLKNSSLAVAVGFA----DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386 +++LLK+SSL +G A ++ +G + TG ++ + +YL L++ + F+N Sbjct: 167 FISLLKDSSLVFMLGLAASDREIFRIGNDAMANTGNLSPLVAAGV-LYLILTVPLTHFVN 225 Query: 387 RLNAKI--ALKEKK 398 ++ ++ EKK Sbjct: 226 FIDHRLRTGKPEKK 239 Score = 40.4 bits (93), Expect = 0.48, Method: Compositional matrix adjust. Identities = 18/60 (30%), Positives = 34/60 (56%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 ++VG NT LA + I +++G + +S N W+ R+Y ++FR +P ++VI + Sbjct: 25 LMVGLPNTLILAVASGILGSVLGLALAMMGISRNAGARWVARIYTDIFRGLPAILVILVI 84 >gi|315124397|ref|YP_004066401.1| amino acid ABC tansporter, permease protein, His/Glu/Gln/Arg/opine family [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|315018119|gb|ADT66212.1| amino acid ABC tansporter, permease protein, His/Glu/Gln/Arg/opine family [Campylobacter jejuni subsp. jejuni ICDCCJ07001] Length = 247 Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 38/94 (40%), Positives = 69/94 (73%), Gaps = 5/94 (5%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +AL ++A+IAEIVRSG+ +V +GQMEAA A+GL ++ + + ++LPQA ++I+P L ++ Sbjct: 123 LALGLNSSAYIAEIVRSGINSVDKGQMEAARAMGLDYKTSMKEIILPQATKNILPALANE 182 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364 +++L K +S+ VGF ++ + T+ +Q+ QA+ Sbjct: 183 FISLFKETSV---VGFISVIDI--TMQSQSLQAV 211 >gi|255323270|ref|ZP_05364405.1| L-cystine transport system permease protein TcyB [Campylobacter showae RM3277] gi|255299793|gb|EET79075.1| L-cystine transport system permease protein TcyB [Campylobacter showae RM3277] Length = 224 Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 60/206 (29%), Positives = 111/206 (53%), Gaps = 21/206 (10%) Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252 SF LG+++++ T ++R + K K L YI F G P LV + + ++F P++G Sbjct: 35 SFSLGLLIAIL-TAIARIANIKILKQLSEFYIWIFR--GTPLLVQL---FIVYFGLPIVG 88 Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312 + + + I S A+ +E VR+ +++VP+GQ EAA ALG+++ + R Sbjct: 89 VTLDVWSAAI--------ITFSLNIGAYASEAVRAAVLSVPKGQWEAATALGMSYTQILR 140 Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372 ++ PQA R +PPL++ +++ LK++SLA ++ D+ V I +T + + ++ Sbjct: 141 RIIAPQAARISLPPLSNIFISTLKDTSLAASITMVDMFMVAQRIAARTFDPLTLYVLAAL 200 Query: 373 IYLSLSIMIALFMNRLNAKIALKEKK 398 YL ++ F+ L AK+ EK+ Sbjct: 201 FYL----IVCTFLTFLQAKL---EKR 219 >gi|257060311|ref|YP_003138199.1| polar amino acid ABC transporter inner membrane subunit [Cyanothece sp. PCC 8802] gi|256590477|gb|ACV01364.1| polar amino acid ABC transporter, inner membrane subunit [Cyanothece sp. PCC 8802] Length = 401 Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 68/204 (33%), Positives = 107/204 (52%), Gaps = 27/204 (13%) Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL-VLIA 239 LT+ T V SF GI+L+L R + L + YI +I GLP + +L Sbjct: 201 LTLLTAIVSIVLSFPFGILLAL-----GRQSSLNVIRWLSIAYIE--VIRGLPLIGILFM 253 Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIA-LSCYTAAFIAEIVRSGLIAVPRGQME 298 + L PV GS PE + IA + ++AA++AE VR GL +VP+GQ+E Sbjct: 254 AQIMLPLILPV--------GS--RPERVIRAIAGFTLFSAAYLAENVRGGLQSVPKGQIE 303 Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN 358 AA ALGL ++LPQA++++IP + Q+++L K++SL VG DL+ + +I+ Sbjct: 304 AAKALGLNPIFVLIFIVLPQALKAVIPSIVGQFISLFKDTSLLAIVGLVDLLGISQSILA 363 Query: 359 Q---TGQAIEI-----ILIWMFIY 374 G+ E+ ++ W+F Y Sbjct: 364 NPKFIGRYGEVYLFIAVIYWIFCY 387 >gi|295691960|ref|YP_003600570.1| amino acid ABC transporter, permease component [Lactobacillus crispatus ST1] gi|295030066|emb|CBL49545.1| Amino acid ABC transporter, permease component [Lactobacillus crispatus ST1] Length = 537 Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 41/116 (35%), Positives = 73/116 (62%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I +S T A++AE++R G+I+ P GQ EAA ALG+TH + ++LPQA+++ +P +T++ Sbjct: 391 IIVSINTGAYLAEVIRGGIISTPEGQFEAASALGMTHNQRMWHIILPQAIKNCLPSITNE 450 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386 ++ +K++S+ + ++L VG TI +Q+ + L+ IYL L+ I N Sbjct: 451 FIVNIKDTSVLSIISVSELFFVGTTIASQSFKFFPTYLMISAIYLILTFTITRIFN 506 >gi|307729013|ref|YP_003906237.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia sp. CCGE1003] gi|307583548|gb|ADN56946.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. CCGE1003] Length = 225 Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 41/134 (30%), Positives = 76/134 (56%) Query: 260 STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319 STV +S A S AAF EI+R+G+ ++PRGQ++A ALG+T R+ R V+LPQA Sbjct: 91 STVDLRLVSALTAYSLVEAAFFCEIIRAGIASLPRGQLQAGYALGMTSRQTMRYVILPQA 150 Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379 R+++P +Q + + +++SL + D I + G + ++L+ +Y +++ Sbjct: 151 FRAMVPLALTQCIVIFQDTSLVYVIALGDFFRRVTAIGERDGTIVPMLLVAGAVYWAITS 210 Query: 380 MIALFMNRLNAKIA 393 ++ N + ++A Sbjct: 211 VLIAVTNGVRTRLA 224 >gi|163792483|ref|ZP_02186460.1| hypothetical protein BAL199_16588 [alpha proteobacterium BAL199] gi|159182188|gb|EDP66697.1| hypothetical protein BAL199_16588 [alpha proteobacterium BAL199] Length = 254 Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 54/167 (32%), Positives = 91/167 (54%), Gaps = 10/167 (5%) Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY----IALSCYTAAFIAEIVR 286 G P LV I L Y GQF+FI S + P Y IAL+ T A+ +EI+R Sbjct: 73 GTPLLVQIFLIYY------GTGQFDFIKESFLWPVLREAYWCAIIALTLNTGAYTSEIIR 126 Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346 G+ +VP GQ+EAA A G+ R V+ PQA+R +P ++ + ++K++SLA V Sbjct: 127 GGIESVPWGQVEAAKACGMNVWLRFRRVVFPQAIRQALPGYGNEIILMVKSTSLASTVTL 186 Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393 ++ + I++QT +E+ ++ IYL++ +I ++ L +++ Sbjct: 187 LEITGIARKIVSQTYAPLELFIMAGAIYLTIVFVITRAVDMLENRLS 233 >gi|153951169|ref|YP_001398026.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Campylobacter jejuni subsp. doylei 269.97] gi|152938615|gb|ABS43356.1| amino acid ABC tansporter, permease protein, His/Glu/Gln/Arg/opine family [Campylobacter jejuni subsp. doylei 269.97] Length = 247 Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 38/94 (40%), Positives = 69/94 (73%), Gaps = 5/94 (5%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +AL ++A+IAEIVRSG+ +V +GQMEAA A+GL ++ + + ++LPQA ++I+P L ++ Sbjct: 123 LALGLNSSAYIAEIVRSGINSVDKGQMEAARAMGLDYKTSMKEIILPQATKNILPALANE 182 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364 +++L K +S+ VGF ++ + T+ +Q+ QA+ Sbjct: 183 FISLFKETSV---VGFISVIDI--TMQSQSLQAV 211 >gi|313888661|ref|ZP_07822326.1| ABC transporter, permease protein [Peptoniphilus harei ACS-146-V-Sch2b] gi|312845390|gb|EFR32786.1| ABC transporter, permease protein [Peptoniphilus harei ACS-146-V-Sch2b] Length = 256 Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 42/125 (33%), Positives = 76/125 (60%) Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327 S I +S T A++AEI+R G+I+V RGQ E A+++G+TH + V+LPQA+R+IIP + Sbjct: 108 SALIIVSVNTGAYMAEIIRGGIISVDRGQTEGALSIGMTHWQTMTEVVLPQAVRNIIPSV 167 Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387 ++++ +K+SS+ + ++L + + + E+ I IYL L+I ++ M Sbjct: 168 GNEFIVNIKDSSVLNVISVSELFFISKSAAGTYLRYFEVFFITALIYLFLTISVSQAMKL 227 Query: 388 LNAKI 392 + K+ Sbjct: 228 VEKKL 232 >gi|294670526|ref|ZP_06735406.1| hypothetical protein NEIELOOT_02248 [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291307805|gb|EFE49048.1| hypothetical protein NEIELOOT_02248 [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 248 Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 47/121 (38%), Positives = 78/121 (64%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +AL+ A+I EI R+G++++ +GQMEAA +LGLT+ +A R V+LPQA R ++PPL ++ Sbjct: 122 LALTANATAYITEIFRAGILSIDKGQMEAARSLGLTYPQAMRFVILPQAFRRMLPPLANE 181 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++ LLK+SSL ++ A+L V TI + E + IYL ++I ++ F + L Sbjct: 182 FITLLKDSSLLSSIAVAELTYVQRTISGRFSIYEEPLYAIALIYLLMTICLSWFFSSLEK 241 Query: 391 K 391 + Sbjct: 242 R 242 >gi|269796734|ref|YP_003316189.1| amino acid ABC transporter membrane protein [Sanguibacter keddieii DSM 10542] gi|269098919|gb|ACZ23355.1| amino acid ABC transporter membrane protein [Sanguibacter keddieii DSM 10542] Length = 374 Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 69/220 (31%), Positives = 115/220 (52%), Gaps = 27/220 (12%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLL----YISTFLIFGLPTLVLIALKYQLHF 246 V F LG VL+L RLSR PLL + T++ +P ++ + L Y L + Sbjct: 106 VIGFGLGTVLALM--RLSRS---------PLLRAVSWAYTWVFRSVPLILQLLLWYNLAY 154 Query: 247 DKPVLG-------QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299 P L F G V +F + + L AA+ AEIVR+G+++V +GQ EA Sbjct: 155 LYPTLSLGIPFGPSFAEFGTLDVINKFGAAILGLGLSQAAYSAEIVRAGILSVDQGQHEA 214 Query: 300 AIALGLTH-RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN 358 A ALG+ R++TR+VL PQAMR+I+P ++ + L+K +S+ + + +L G I Sbjct: 215 AAALGIPRARQSTRIVL-PQAMRTIVPTSVNEIIGLVKGTSVVYVLAYGELFYTVGVIYG 273 Query: 359 QTGQAIEIIL---IWMFIYLSLSIMIALFMNRLNAKIALK 395 + + + +++ IW I ++ +I ++ R AK A++ Sbjct: 274 RNQRVVPLLMVAAIWYVIITTVITVIQFYVERHYAKGAVR 313 >gi|226228607|ref|YP_002762713.1| putative amino acid ABC transporter permease/substrate binding protein [Gemmatimonas aurantiaca T-27] gi|226091798|dbj|BAH40243.1| putative amino acid ABC transporter permease/substrate binding protein [Gemmatimonas aurantiaca T-27] Length = 519 Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 55/173 (31%), Positives = 91/173 (52%), Gaps = 5/173 (2%) Query: 224 ISTFLIFGLPTL-VLIALKYQLHFDKPVLGQ----FNFIGGSTVSPEFMSLYIALSCYTA 278 I+T ++G P L +++ ++ PVL Q + + G P ++ + L A Sbjct: 344 IATGRVYGGPVLRAALSIYVEVVRGTPVLLQLFVLYYGLSGVIRLPALVAAILGLGLNYA 403 Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338 A+ +EI RS L+A+PR Q+EAA LGLT + RLV PQA+R + P+T+ ++ LLK+S Sbjct: 404 AYESEIYRSALMAIPRAQLEAARTLGLTEWQVLRLVRGPQALRLALAPMTNDFVALLKDS 463 Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 SL + +L +G + L+ IYL +S+ ++ RL A+ Sbjct: 464 SLVSVITVVELTKQTAIYATNSGSWVVPGLMCGVIYLCMSLPLSRLARRLEAR 516 >gi|261406265|ref|YP_003242506.1| polar amino acid ABC transporter inner membrane subunit [Paenibacillus sp. Y412MC10] gi|261282728|gb|ACX64699.1| polar amino acid ABC transporter, inner membrane subunit [Paenibacillus sp. Y412MC10] Length = 480 Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 60/207 (28%), Positives = 110/207 (53%), Gaps = 18/207 (8%) Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251 F F+LG++++L R K K L YI +I G P LV + + +H+ L Sbjct: 292 FGFILGLIVALM-----RMSGVKILKFLATAYIE--IIRGTPMLVQL---FIIHYS---L 338 Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311 F+ SP S + LS +AA++AEI R+G+ V RGQ+EAA +LG+T KA Sbjct: 339 AAFDI----KFSP-IQSGILTLSINSAAYLAEIFRAGIQGVDRGQLEAARSLGMTKGKAM 393 Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371 R ++LPQA++ ++P + ++++ ++K SS+ +G D++ + T + +L+ Sbjct: 394 RHIILPQALKGVLPAIGNEFVVIIKESSIVSFIGVFDIMYQAQILRGSTFAPLNPLLVAA 453 Query: 372 FIYLSLSIMIALFMNRLNAKIALKEKK 398 IY L+ +++ + K++ + + Sbjct: 454 MIYFILTFVLSKLLGVWERKLSASDNR 480 >gi|33592312|ref|NP_879956.1| amino acids ABC transporter, permease protein [Bordetella pertussis Tohama I] gi|33596425|ref|NP_884068.1| amino acids ABC transporter, permease protein [Bordetella parapertussis 12822] gi|33602284|ref|NP_889844.1| amino acids ABC transporter, permease protein [Bordetella bronchiseptica RB50] gi|33566194|emb|CAE37100.1| amino acids ABC transporter, permease protein [Bordetella parapertussis] gi|33571957|emb|CAE41478.1| amino acids ABC transporter, permease protein [Bordetella pertussis Tohama I] gi|33576723|emb|CAE33801.1| amino acids ABC transporter, permease protein [Bordetella bronchiseptica RB50] Length = 229 Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 53/157 (33%), Positives = 90/157 (57%), Gaps = 15/157 (9%) Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290 G+P L+LI Y F P L GGS F +L AL Y +A+++E++RSG+ Sbjct: 70 GMPLLMLIFWAY---FAVPKL-----TGGSISG--FWTLVTALVIYESAYLSEVIRSGIE 119 Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 A+P+GQ+EA+ +LG+ + R V+LPQA+ +++P +TSQ+++ +K +SL + +L Sbjct: 120 AIPKGQIEASRSLGVGYWTTMRKVVLPQALFNVLPSMTSQFVSTIKETSLGYVISVNELT 179 Query: 351 ----SVGGTIINQTGQAIEII-LIWMFIYLSLSIMIA 382 V ++ Q Q I+ +I+ + SLS +A Sbjct: 180 FAANQVNNLVLTQPLQVFGILAIIYFLVCFSLSRSVA 216 >gi|297624654|ref|YP_003706088.1| polar amino acid ABC transporter inner membrane subunit [Truepera radiovictrix DSM 17093] gi|297165834|gb|ADI15545.1| polar amino acid ABC transporter, inner membrane subunit [Truepera radiovictrix DSM 17093] Length = 417 Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 48/132 (36%), Positives = 82/132 (62%), Gaps = 8/132 (6%) Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQF-NFIGGSTVSPEFMSLYIALSCYTAAF 280 LY+ +I G+P LV+I L+ P+ + GG P M +A++ AA+ Sbjct: 249 LYVD--MIRGIPMLVII-----LYVGFPLQAALRDATGGLLNMPILMRGGVAIALGYAAY 301 Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340 +AEI R+G+ A+P+GQ+EAA +LGL+ ++ R V+LPQA+R + PPL ++++ +LK++SL Sbjct: 302 MAEIFRAGIEAIPKGQLEAARSLGLSSWQSARFVVLPQALRIVTPPLGNEFIAMLKDTSL 361 Query: 341 AVAVGFADLVSV 352 +G +L + Sbjct: 362 LSILGVRELTQL 373 >gi|256784801|ref|ZP_05523232.1| glutamate permease [Streptomyces lividans TK24] Length = 295 Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 67/221 (30%), Positives = 114/221 (51%), Gaps = 23/221 (10%) Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALK 241 T+ A V + LG VL + RLS H + +P+ + F +P LVL+ Sbjct: 71 TLKAAALSMVIALPLGAVLGI--ARLSDHAWVR----IPVAIVVEFF-RSIPVLVLM--- 120 Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLY---IALSCYTAAFIAEIVRSGLIAVPRGQME 298 + G F + VS + LY L Y A+ +AEIVR+G++A+P+GQ E Sbjct: 121 --------IFGLALFAEYTDVSSDDRPLYAVVTGLVLYNASVLAEIVRAGILALPKGQAE 172 Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV-GFADLVSVGGTII 357 A+A+GL ++ RL+LLPQA+ +++P + SQ + +LK+++L AV F +L++ T+ Sbjct: 173 GAMAIGLRKGQSMRLILLPQAVTTMLPAIVSQLVVILKDTALGGAVLTFPELLASANTMS 232 Query: 358 NQTG-QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 G I + IY++L+ + F + L ++ +K Sbjct: 233 GYYGANVIASFTVVAVIYIALNFSLTTFASWLERRLRRAKK 273 Score = 42.7 bits (99), Expect = 0.11, Method: Compositional matrix adjust. Identities = 28/84 (33%), Positives = 44/84 (52%) Query: 64 LSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK 123 L E+ + + + +TSD ++T I G NT A M+ A +G ++G RLS + Sbjct: 39 LDEKGQLDWAKWQMFFTSDEPWSTYIWPGLQNTLKAAALSMVIALPLGAVLGIARLSDHA 98 Query: 124 LVAWICRVYVEVFRNIPPLVVIFF 147 V + VE FR+IP LV++ F Sbjct: 99 WVRIPVAIVVEFFRSIPVLVLMIF 122 >gi|229086725|ref|ZP_04218892.1| Arginine transport system permease protein artQ [Bacillus cereus Rock3-44] gi|228696599|gb|EEL49417.1| Arginine transport system permease protein artQ [Bacillus cereus Rock3-44] Length = 219 Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 39/118 (33%), Positives = 75/118 (63%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P F++ +A S + A+++EI+R+G+ AV +GQ EAA+ALG+ + K + ++LPQA+++I Sbjct: 87 PAFLAAVLAFSLNSGAYMSEIIRAGIQAVDKGQTEAAMALGVPYGKMMKNIILPQALKNI 146 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 +P L +++ L K S++ +G DL+ + +T + +E +L +Y L I++ Sbjct: 147 LPALVNEFATLTKESAVVTVIGATDLMRRAYIVGGETFKYLEPLLFVGLVYYILVIIL 204 >gi|161520629|ref|YP_001584056.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia multivorans ATCC 17616] gi|189353185|ref|YP_001948812.1| ABC-type polar amino acid transport system ATPase component [Burkholderia multivorans ATCC 17616] gi|160344679|gb|ABX17764.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia multivorans ATCC 17616] gi|189337207|dbj|BAG46276.1| ABC-type polar amino acid transport system ATPase component [Burkholderia multivorans ATCC 17616] Length = 500 Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 60/181 (33%), Positives = 95/181 (52%), Gaps = 12/181 (6%) Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFN 255 LG++L F L+R H+ K +YI F LP LVL+ Y L P + Sbjct: 34 LGVLLG-FPVALARQSHQPALKRAAAVYIWFFR--SLPLLVLLVFIYNL----PQV---- 82 Query: 256 FIGGSTV-SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLV 314 F STV S F + IA+ A+ AEI R G+++VPRGQ+EA ALG+ R++ Sbjct: 83 FPATSTVLSDPFTAGLIAMVLSETAYFAEIHRGGILSVPRGQLEAGRALGIRFTGIQRMI 142 Query: 315 LLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374 ++PQ +R +P L ++++ ++K +SL + A+++ VG + Q E +L F Y Sbjct: 143 VMPQVIRIALPALANEFITIVKLTSLVSVISLAEILLVGQRLYTQNFLVFETMLAVAFYY 202 Query: 375 L 375 + Sbjct: 203 V 203 >gi|307547047|ref|YP_003899526.1| ABC transporter permease [Halomonas elongata DSM 2581] gi|307219071|emb|CBV44341.1| ABC-type transport system permease protein [Halomonas elongata DSM 2581] Length = 223 Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 40/107 (37%), Positives = 69/107 (64%) Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 A++ + A+I+EIVR G+ ++ RGQ EA ++LGL+ + R ++ PQA R +IPPL +Q Sbjct: 99 AIAVNSGAYISEIVRGGVQSIERGQKEAGLSLGLSRVQTFRYIIWPQAFRRMIPPLGNQG 158 Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378 + +K++SL +G +LV G I T A+E+ L+ +YL+++ Sbjct: 159 IISIKDTSLFSVIGVGELVRQGQIYIATTFTALEVYLMVAMLYLAIT 205 >gi|282899901|ref|ZP_06307862.1| Amino acid ABC transporter, permease protein, 3- TM region protein, His/Glu/Gln/Arg/opine [Cylindrospermopsis raciborskii CS-505] gi|281195171|gb|EFA70107.1| Amino acid ABC transporter, permease protein, 3- TM region protein, His/Glu/Gln/Arg/opine [Cylindrospermopsis raciborskii CS-505] Length = 340 Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 43/111 (38%), Positives = 68/111 (61%), Gaps = 8/111 (7%) Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 L ++AA++AE VR GL ++P+GQ EAA ALGL LV+LPQA+R++IP + Q+ Sbjct: 219 GLVLFSAAYMAENVRGGLQSIPKGQFEAARALGLNTFLLLILVVLPQALRAVIPTIVGQF 278 Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQT---GQAIEIILI-----WMFIY 374 + L K++SL VG +L + +I+ Q G+ +E+ + W+F Y Sbjct: 279 IGLFKDTSLLSLVGLVELTGIARSILAQPQFLGRYMEVYIFIGAVYWLFCY 329 >gi|253681835|ref|ZP_04862632.1| amino acid ABC transporter, permease component [Clostridium botulinum D str. 1873] gi|253561547|gb|EES90999.1| amino acid ABC transporter, permease component [Clostridium botulinum D str. 1873] Length = 215 Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 41/136 (30%), Positives = 85/136 (62%), Gaps = 1/136 (0%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G ++SP ++ I LS + A+++EI+R G+I++ +GQ EA +LG T+ + V+LPQ Sbjct: 80 GISLSPMAAAI-IGLSLNSGAYMSEIIRGGIISIDKGQFEACKSLGFTNLQTMTKVILPQ 138 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378 A R I+P + ++++ +LK++SL A+ +L+ ++ +G+ +E +I +YL ++ Sbjct: 139 AFRIILPSVGNEFITMLKDTSLVSAITMEELMRNAELQMSASGRPVEPFVIAAVLYLLMT 198 Query: 379 IMIALFMNRLNAKIAL 394 + A+ + L K+++ Sbjct: 199 TVFAVIFSSLEKKMSM 214 >gi|120403416|ref|YP_953245.1| polar amino acid ABC transporter inner membrane subunit [Mycobacterium vanbaalenii PYR-1] gi|119956234|gb|ABM13239.1| amino acid ABC transporter membrane protein 1, PAAT family [Mycobacterium vanbaalenii PYR-1] Length = 226 Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 45/126 (35%), Positives = 75/126 (59%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + L+ YTA+F+ E VRSG+ VP GQ EAA +LG T + R+VLLPQA R+++ PL S Sbjct: 101 LGLTVYTASFVCETVRSGVNTVPLGQAEAARSLGFTFGQNLRIVLLPQAFRAVLIPLGSV 160 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 + L KN+++A A+G A+ + +I T + + I+ ++ L++ + L L Sbjct: 161 LIALTKNTTIASAIGVAEAALLMKEMIENTAAVLVVGGIFALGFVILTLPLGLLFGWLGK 220 Query: 391 KIALKE 396 ++A+ Sbjct: 221 RMAVAH 226 Score = 39.7 bits (91), Expect = 0.83, Method: Compositional matrix adjust. Identities = 22/65 (33%), Positives = 33/65 (50%) Query: 83 SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142 + Y IL F T L I A ++GT++ A RL+ ++ WI YV + RN P Sbjct: 5 TEYRAEILAAFWTTIQLTVLAAIGALVLGTVLAAMRLAPVPMLNWIGTAYVNIVRNTPLT 64 Query: 143 VVIFF 147 ++I F Sbjct: 65 LIILF 69 >gi|86150250|ref|ZP_01068477.1| amino acid ABC tansporter, permease protein, His/Glu/Gln/Arg/opine family [Campylobacter jejuni subsp. jejuni CF93-6] gi|85839366|gb|EAQ56628.1| amino acid ABC tansporter, permease protein, His/Glu/Gln/Arg/opine family [Campylobacter jejuni subsp. jejuni CF93-6] Length = 247 Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 38/94 (40%), Positives = 69/94 (73%), Gaps = 5/94 (5%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +AL ++A+IAEIVRSG+ +V +GQMEAA A+GL ++ + + ++LPQA ++I+P L ++ Sbjct: 123 LALGLNSSAYIAEIVRSGINSVDKGQMEAARAMGLDYKTSMKEIILPQATKNILPALANE 182 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364 +++L K +S+ VGF ++ + T+ +Q+ QA+ Sbjct: 183 FISLFKETSV---VGFISVIDI--TMQSQSLQAV 211 >gi|228925611|ref|ZP_04088700.1| Amino acid ABC transproter, permease [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|301052080|ref|YP_003790291.1| amino acid ABC transporter permease [Bacillus anthracis CI] gi|228834089|gb|EEM79637.1| Amino acid ABC transproter, permease [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|300374249|gb|ADK03153.1| amino acid ABC transporter, permease [Bacillus cereus biovar anthracis str. CI] Length = 230 Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 48/126 (38%), Positives = 74/126 (58%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IAL+ + A+I EI R + ++ RGQMEAA +LG+ + A R ++LPQA R IPPL +Q Sbjct: 89 IALAIHNGAYITEIFRGSIQSIDRGQMEAARSLGMPYSLAMRRIVLPQAFRQSIPPLGNQ 148 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++ LK+SSL VG ++L G +I Q ++ +I YL L ++ +N L Sbjct: 149 FIIGLKDSSLVAYVGLSELWGSGLSIAAGNFQQLDTYIIVGLYYLVLVLLFTYLVNLLEK 208 Query: 391 KIALKE 396 ++ KE Sbjct: 209 RLQRKE 214 >gi|261340316|ref|ZP_05968174.1| L-cystine ABC transporter, permease protein [Enterobacter cancerogenus ATCC 35316] gi|288317407|gb|EFC56345.1| L-cystine ABC transporter, permease protein [Enterobacter cancerogenus ATCC 35316] Length = 222 Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 61/207 (29%), Positives = 106/207 (51%), Gaps = 18/207 (8%) Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251 F VLG VL+L R H + L YIS F G P LIA + +++ P Sbjct: 32 FGLVLGFVLALM-----RMSHVLPIRWLARFYISVFR--GTP---LIAQLFMIYYGLP-- 79 Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311 QF G + P + I LS TAA+ +E +R+ + ++ +GQ EAA ++G+T + Sbjct: 80 -QF----GIELDP-IPAAMIGLSLNTAAYTSETLRAAISSIDKGQWEAAASIGMTPWQTL 133 Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371 R +LPQA R +PPL++ +++L+K++SLA + +L I ++T + + L Sbjct: 134 RRAILPQAARVALPPLSNSFISLVKDTSLAATIQVPELFRQAQLITSRTLEVFTMYLAAS 193 Query: 372 FIYLSLSIMIALFMNRLNAKIALKEKK 398 IY ++ +++ N ++ +E+ Sbjct: 194 LIYWVMATVLSALQNYFENQLNRQERD 220 Score = 37.7 bits (86), Expect = 3.1, Method: Compositional matrix adjust. Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 8/97 (8%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G V T L+ GM ++G ++ R+S + W+ R Y+ VFR P + +F + Sbjct: 15 LLKGAVFTLQLSIGGMFFGLVLGFVLALMRMSHVLPIRWLARFYISVFRGTPLIAQLFMI 74 Query: 149 YKSV----LSVLPIPDHSIVLPFGMFLNNRGLSFPTL 181 Y + + + PIP I G+ LN + TL Sbjct: 75 YYGLPQFGIELDPIPAAMI----GLSLNTAAYTSETL 107 >gi|222082275|ref|YP_002541640.1| octopine ABC transporter [Agrobacterium radiobacter K84] gi|221726954|gb|ACM30043.1| octopine ABC transporter [Agrobacterium radiobacter K84] Length = 242 Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 53/167 (31%), Positives = 92/167 (55%), Gaps = 10/167 (5%) Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY----IALSCYTAAFIA 282 F+ G P LV I L Y LGQF + S + P Y +AL+ TAA+ + Sbjct: 59 FVFRGTPLLVQIFLIYY------GLGQFPAVRHSILWPILRQPYWCAVLALTLNTAAYAS 112 Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342 EI+R GL++VP GQ+EAA A G+ R ++ P A+R +P ++ ++++K +SLA Sbjct: 113 EIIRGGLLSVPHGQIEAARACGMGRFMQFRRIIWPLAIRQALPGYGNEMISMVKATSLAS 172 Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 + ++ V +I++T +AIE+ ++ IYL+++ ++ + L Sbjct: 173 IITLMEVTGVAAKLISETYRAIEVFIVAGAIYLAINFLLTRLIQLLE 219 >gi|222094148|ref|YP_002528205.1| amino acid ABC transporter , permease protein [Bacillus cereus Q1] gi|221238203|gb|ACM10913.1| amino acid ABC transporter, permease protein [Bacillus cereus Q1] Length = 269 Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 49/126 (38%), Positives = 74/126 (58%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IAL+ + A+I EI R + +V RGQMEAA +LG+ + A R ++LPQA R IPPL +Q Sbjct: 128 IALAIHNGAYITEIFRGSIQSVDRGQMEAARSLGMPYPLAMRRIVLPQAFRQSIPPLGNQ 187 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++ LK+SSL VG ++L G +I Q ++ +I YL L ++ +N L Sbjct: 188 FIIGLKDSSLVAYVGLSELWGSGLSIAAGNFQQLDTYIIVGLYYLVLVLLFTYLVNLLEK 247 Query: 391 KIALKE 396 ++ KE Sbjct: 248 RLQRKE 253 >gi|149183272|ref|ZP_01861715.1| amino acid ABC transporter (permease) [Bacillus sp. SG-1] gi|148849032|gb|EDL63239.1| amino acid ABC transporter (permease) [Bacillus sp. SG-1] Length = 221 Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 59/200 (29%), Positives = 108/200 (54%), Gaps = 11/200 (5%) Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252 SF G++L++ T L+R K + + +Y+S I G P LV + + + F LG Sbjct: 27 SFACGMILAI-TTALARLSGSKILRGIARVYVSA--IRGTPLLVQL---FIIFFGLGNLG 80 Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312 I P F S IA S A+ +EIVR+ + ++P+GQ EA ++G+T+ + + Sbjct: 81 ----IEALKFDP-FPSAVIAFSLNVGAYASEIVRAAIQSIPKGQWEAGYSIGMTYGQNLK 135 Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372 V+LPQA R +PPL++ +++L+K++SLA + +L I T + + + + F Sbjct: 136 RVILPQAARVSVPPLSNSFISLVKDTSLASLILVTELFRKAQEIAATTYEFLLLYIEAAF 195 Query: 373 IYLSLSIMIALFMNRLNAKI 392 +Y + ++ L +RL +++ Sbjct: 196 LYWVMCFILTLIQDRLESRL 215 >gi|118586386|ref|ZP_01543835.1| glutamine ABC transporter, integral membrane protein [Oenococcus oeni ATCC BAA-1163] gi|118433173|gb|EAV39890.1| glutamine ABC transporter, integral membrane protein [Oenococcus oeni ATCC BAA-1163] Length = 214 Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 58/179 (32%), Positives = 91/179 (50%), Gaps = 14/179 (7%) Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273 KT + YI F +P L+++ Y V+ + IGG T I L Sbjct: 46 KTANVIARAYIEVFR--NIPLLIIVMFFYL------VVTKIVKIGGFTAGT------IGL 91 Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333 + YT+AFIAE VR+G+ +V GQ E A A GL+ + R+++LPQA + IP L +Q++N Sbjct: 92 TLYTSAFIAETVRAGINSVGIGQTEGARANGLSFWQTLRIIILPQAFKIAIPSLGNQFIN 151 Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 L+KNSS+ V DL+ + T + +I YL +++ + +M L K+ Sbjct: 152 LVKNSSILAFVAGGDLMYTANNVAATTFDSFNSYIIVGIFYLIITLPLNYYMKFLETKL 210 Score = 43.9 bits (102), Expect = 0.049, Method: Compositional matrix adjust. Identities = 25/69 (36%), Positives = 38/69 (55%) Query: 90 LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 LV F T + +I +T++GTL ++ K I R Y+EVFRNIP L+++ F Y Sbjct: 13 LVAFGYTLLSSIIALIASTVLGTLFAILQIVPIKTANVIARAYIEVFRNIPLLIIVMFFY 72 Query: 150 KSVLSVLPI 158 V ++ I Sbjct: 73 LVVTKIVKI 81 >gi|15601789|ref|NP_233420.1| amino acid ABC transporter, permease protein [Vibrio cholerae O1 biovar eltor str. N16961] gi|227812602|ref|YP_002812612.1| amino acid ABC transporter, permease protein [Vibrio cholerae M66-2] gi|229505829|ref|ZP_04395338.1| amino acid ABC transporter permease protein [Vibrio cholerae BX 330286] gi|229510316|ref|ZP_04399796.1| amino acid ABC transporter permease protein [Vibrio cholerae B33] gi|229517552|ref|ZP_04406997.1| amino acid ABC transporter permease protein [Vibrio cholerae RC9] gi|229605362|ref|YP_002876066.1| amino acid ABC transporter permease protein [Vibrio cholerae MJ-1236] gi|298499805|ref|ZP_07009611.1| amino acid ABC transporter, permease [Vibrio cholerae MAK 757] gi|9658481|gb|AAF96932.1| amino acid ABC transporter, permease protein [Vibrio cholerae O1 biovar El Tor str. N16961] gi|227011744|gb|ACP07955.1| amino acid ABC transporter, permease protein [Vibrio cholerae M66-2] gi|227015682|gb|ACP11891.1| amino acid ABC transporter, permease protein [Vibrio cholerae O395] gi|229345588|gb|EEO10561.1| amino acid ABC transporter permease protein [Vibrio cholerae RC9] gi|229352761|gb|EEO17701.1| amino acid ABC transporter permease protein [Vibrio cholerae B33] gi|229356180|gb|EEO21098.1| amino acid ABC transporter permease protein [Vibrio cholerae BX 330286] gi|229371848|gb|ACQ62270.1| amino acid ABC transporter permease protein [Vibrio cholerae MJ-1236] gi|297541786|gb|EFH77837.1| amino acid ABC transporter, permease [Vibrio cholerae MAK 757] Length = 266 Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 53/158 (33%), Positives = 85/158 (53%), Gaps = 14/158 (8%) Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268 R G+AL YI+ ++ P LV I L Y + PV+G F + Sbjct: 90 RQSRSLVGRALGTGYIA--VVRNTPLLVQIYLLYFVF--GPVIGL----------DRFAT 135 Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328 +AL+ + A+ AE+ R GL ++P+GQ EAA +LGL+ V+LPQ ++ +PPLT Sbjct: 136 AVLALALFQGAYTAEVFRGGLNSIPQGQYEAARSLGLSRFFTFYDVILPQLLQRTLPPLT 195 Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 ++ ++L+KNSS+ + DL + G I+++T EI Sbjct: 196 NEMVSLIKNSSIVSVMAIFDLTTQGRNIVSETAMPFEI 233 >gi|89073558|ref|ZP_01160080.1| ABC-type arginine transport system, permease component [Photobacterium sp. SKA34] gi|89050585|gb|EAR56071.1| ABC-type arginine transport system, permease component [Photobacterium sp. SKA34] Length = 219 Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 45/135 (33%), Positives = 80/135 (59%), Gaps = 1/135 (0%) Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321 +SP F+S IALS A++ A+ +R + AVP+GQ EAA ALG++ + +++PQA+R Sbjct: 72 ISP-FLSGVIALSLIFASYAAQTIRGAIKAVPKGQREAASALGISKSRTFVAIIIPQAIR 130 Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 +P LT+Q+L LLK+++L +G DL+ T ++ +YL ++++ Sbjct: 131 HALPGLTNQWLVLLKDTALVSLIGVTDLLKQAQLSSAATHESFTWYATAAAVYLVITLIT 190 Query: 382 ALFMNRLNAKIALKE 396 + R++AK + +E Sbjct: 191 QQIIKRIDAKYSAQE 205 >gi|325507519|gb|ADZ19155.1| Glutamine-binding periplasmic protein fused to glutamine permease [Clostridium acetobutylicum EA 2018] Length = 489 Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 48/158 (30%), Positives = 85/158 (53%), Gaps = 23/158 (14%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 + PLL + F+ FG+P L G ++P + IA+S Sbjct: 335 RGTPLLVQAFFIFFGIPGL----------------------SGLKINPVVAGI-IAVSLN 371 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 A+++EI R G++++ +GQMEAA +LG+ +R A ++ PQA++ +IP + +Q++ LK Sbjct: 372 AGAYMSEIFRGGILSINQGQMEAARSLGIPYRTAMLKIVFPQAVKVMIPSIVNQFIISLK 431 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374 ++S+ +G +L + G II T +A +I LI +Y Sbjct: 432 DTSILSVIGIQELTNTGQIIIGATFKAFQIWLIVAIMY 469 >gi|238920485|ref|YP_002934000.1| glutamine ABC transporter permease protein [Edwardsiella ictaluri 93-146] gi|238870054|gb|ACR69765.1| conserved hypothetical protein [Edwardsiella ictaluri 93-146] Length = 218 Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 55/187 (29%), Positives = 99/187 (52%), Gaps = 12/187 (6%) Query: 208 SRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFM 267 +R F + L++I LI G P +V + Y F P++ + P F Sbjct: 43 ARAFGGWLSNHIALVFIE--LIRGTPIVVQVMFIY---FALPMMMPLR------IDP-FS 90 Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327 + I + + A+IAEI R ++++ G EA +ALGL+ R R V++P A+R ++PPL Sbjct: 91 AAIITIMINSGAYIAEITRGAVLSIHSGFREAGLALGLSRRDTLRHVIMPLALRRMLPPL 150 Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387 +Q++ +K++SL + +G A+L G II +A+EI IYL +++ ++ + R Sbjct: 151 GNQWIVSIKDTSLFIVIGVAELTRQGQEIIAGNFRAMEIWSAVAVIYLIMTLALSFVLRR 210 Query: 388 LNAKIAL 394 L ++ + Sbjct: 211 LERRLKI 217 >gi|297579919|ref|ZP_06941846.1| amino acid ABC transporter, permease [Vibrio cholerae RC385] gi|297535565|gb|EFH74399.1| amino acid ABC transporter, permease [Vibrio cholerae RC385] Length = 266 Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 53/158 (33%), Positives = 85/158 (53%), Gaps = 14/158 (8%) Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268 R H G+AL YI+ ++ P LV I L Y + PV+G F + Sbjct: 90 RQSHSLVGRALGTGYIA--VVRNTPLLVQIYLLYFVF--GPVIG----------LDRFAT 135 Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328 +AL+ + A+ AE+ R GL ++ +GQ EAA +LGL+ V+LPQ ++ +PPLT Sbjct: 136 AVLALALFQGAYTAEVFRGGLNSIAQGQYEAARSLGLSRFFTFYDVILPQLLQRTLPPLT 195 Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 ++ ++L+KNSS+ + DL + G I+++T EI Sbjct: 196 NEMVSLIKNSSIVSVMAIFDLTTQGRNIVSETAMPFEI 233 >gi|86152052|ref|ZP_01070264.1| amino acid ABC tansporter, permease protein, His/Glu/Gln/Arg/opine family [Campylobacter jejuni subsp. jejuni 260.94] gi|121612320|ref|YP_001000576.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Campylobacter jejuni subsp. jejuni 81-176] gi|157415158|ref|YP_001482414.1| amino acid ABC transporter permease [Campylobacter jejuni subsp. jejuni 81116] gi|167005508|ref|ZP_02271266.1| putative polar amino acid transport system permease protein [Campylobacter jejuni subsp. jejuni 81-176] gi|85840837|gb|EAQ58087.1| amino acid ABC tansporter, permease protein, His/Glu/Gln/Arg/opine family [Campylobacter jejuni subsp. jejuni 260.94] gi|87249317|gb|EAQ72277.1| amino acid ABC tansporter, permease protein, His/Glu/Gln/Arg/opine family [Campylobacter jejuni subsp. jejuni 81-176] gi|157386122|gb|ABV52437.1| putative polar amino acid transport system permease protein [Campylobacter jejuni subsp. jejuni 81116] gi|307747801|gb|ADN91071.1| Putative amino-acid ABC tansporter permease protein [Campylobacter jejuni subsp. jejuni M1] gi|315932617|gb|EFV11548.1| Amino acid ABC transporter, permease protein [Campylobacter jejuni subsp. jejuni 327] Length = 247 Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 38/94 (40%), Positives = 69/94 (73%), Gaps = 5/94 (5%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +AL ++A+IAEIVRSG+ +V +GQMEAA A+GL ++ + + ++LPQA ++I+P L ++ Sbjct: 123 LALGLNSSAYIAEIVRSGINSVDKGQMEAARAMGLDYKTSMKEIILPQATKNILPALANE 182 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364 +++L K +S+ VGF ++ + T+ +Q+ QA+ Sbjct: 183 FISLFKETSV---VGFISVIDI--TMQSQSLQAV 211 >gi|121587165|ref|ZP_01676940.1| amino acid ABC transporter, permease protein [Vibrio cholerae 2740-80] gi|121726614|ref|ZP_01679850.1| amino acid ABC transporter, permease protein [Vibrio cholerae V52] gi|147672412|ref|YP_001215044.1| amino acid ABC transporter, permease protein [Vibrio cholerae O395] gi|153817648|ref|ZP_01970315.1| amino acid ABC transporter, permease protein [Vibrio cholerae NCTC 8457] gi|153821766|ref|ZP_01974433.1| amino acid ABC transporter, permease protein [Vibrio cholerae B33] gi|254850197|ref|ZP_05239547.1| amino acid ABC transporter [Vibrio cholerae MO10] gi|255746231|ref|ZP_05420178.1| amino acid ABC transporter permease protein [Vibrio cholera CIRS 101] gi|262158721|ref|ZP_06029835.1| amino acid ABC transporter permease protein [Vibrio cholerae INDRE 91/1] gi|262168871|ref|ZP_06036565.1| amino acid ABC transporter permease protein [Vibrio cholerae RC27] gi|121548604|gb|EAX58656.1| amino acid ABC transporter, permease protein [Vibrio cholerae 2740-80] gi|121630920|gb|EAX63300.1| amino acid ABC transporter, permease protein [Vibrio cholerae V52] gi|126511804|gb|EAZ74398.1| amino acid ABC transporter, permease protein [Vibrio cholerae NCTC 8457] gi|126520762|gb|EAZ77985.1| amino acid ABC transporter, permease protein [Vibrio cholerae B33] gi|146314795|gb|ABQ19335.1| amino acid ABC transporter, permease protein [Vibrio cholerae O395] gi|254845902|gb|EET24316.1| amino acid ABC transporter [Vibrio cholerae MO10] gi|255735985|gb|EET91383.1| amino acid ABC transporter permease protein [Vibrio cholera CIRS 101] gi|262022570|gb|EEY41277.1| amino acid ABC transporter permease protein [Vibrio cholerae RC27] gi|262029601|gb|EEY48251.1| amino acid ABC transporter permease protein [Vibrio cholerae INDRE 91/1] Length = 265 Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 53/158 (33%), Positives = 85/158 (53%), Gaps = 14/158 (8%) Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268 R G+AL YI+ ++ P LV I L Y + PV+G F + Sbjct: 89 RQSRSLVGRALGTGYIA--VVRNTPLLVQIYLLYFVF--GPVIGL----------DRFAT 134 Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328 +AL+ + A+ AE+ R GL ++P+GQ EAA +LGL+ V+LPQ ++ +PPLT Sbjct: 135 AVLALALFQGAYTAEVFRGGLNSIPQGQYEAARSLGLSRFFTFYDVILPQLLQRTLPPLT 194 Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 ++ ++L+KNSS+ + DL + G I+++T EI Sbjct: 195 NEMVSLIKNSSIVSVMAIFDLTTQGRNIVSETAMPFEI 232 >gi|256059928|ref|ZP_05450113.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family protein [Brucella neotomae 5K33] gi|261323898|ref|ZP_05963095.1| ABC transporter [Brucella neotomae 5K33] gi|261299878|gb|EEY03375.1| ABC transporter [Brucella neotomae 5K33] Length = 241 Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 49/168 (29%), Positives = 90/168 (53%), Gaps = 8/168 (4%) Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279 PL +IS+ + + I + Y + P +G PE + IAL+ + ++ Sbjct: 51 PLRWISSAYVEWFRNIPFIVVLYLFFYGLPFMG--------VRLPESIVGTIALAFFASS 102 Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339 + AEI+R ++AVP+GQMEAA A+G+++ + ++ PQ +R ++PP T+ ++++K +S Sbjct: 103 YFAEIIRGAILAVPKGQMEAARAIGMSYFQGLYEIVAPQTVRLLLPPSTNTSISMVKETS 162 Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387 + + A+L G I +T EI L IY ++ + A M+R Sbjct: 163 VLSTITVAELTYQGLVIQGETFAPFEIFLTTAAIYWMITAIFAYLMHR 210 >gi|15902453|ref|NP_358003.1| ABC transporter substrate binding protein - glutamine transport [Streptococcus pneumoniae R6] gi|15457972|gb|AAK99213.1| ABC transporter substrate binding protein - glutamine transport [Streptococcus pneumoniae R6] Length = 311 Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 39/109 (35%), Positives = 66/109 (60%) Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 +S T A++ EIVR G++AV +GQ EAA ALG+TH + R ++LPQ +R+I+P ++++ Sbjct: 174 VSINTGAYMTEIVRGGILAVDKGQFEAATALGMTHNQTMRKIVLPQVVRNILPATGNEFV 233 Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 +K++S+ + +L G T+ QT Q + I IY L+ + Sbjct: 234 INIKDTSVLNVISVVELYFSGNTVATQTYQYFQTFTIIAVIYFVLTFTV 282 >gi|329938379|ref|ZP_08287804.1| putative ABC transporter permease protein [Streptomyces griseoaurantiacus M045] gi|329302352|gb|EGG46243.1| putative ABC transporter permease protein [Streptomyces griseoaurantiacus M045] Length = 341 Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 58/201 (28%), Positives = 104/201 (51%), Gaps = 14/201 (6%) Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248 + V F+LG VL++ RLS + +T L + ++ P LV + + + Sbjct: 96 VMVLGFLLGTVLAVM--RLSANPVLRT-----LSWGYVWIFRSTPLLVQLLFWFNIGALY 148 Query: 249 PVLG-------QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301 P LG QF + + ++ I L+ + A+ AE+VR G+++V GQ EAA Sbjct: 149 PTLGLGVPFGPQFVTVKTVNLLGPTLTAVIGLTLHETAYAAEVVRGGILSVDPGQTEAAQ 208 Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361 ALGL+ R+ R +++PQAMRSI+P + + LK +S+ + DL+ + NQT Sbjct: 209 ALGLSRRRTLRRIVVPQAMRSIVPTAGNMLIGTLKGTSIVSVLAVHDLLYSVQLVYNQTY 268 Query: 362 QAIEIILIWMFIYLSLSIMIA 382 Q I ++++ Y++++ ++ Sbjct: 269 QVIPLLMVATLWYIAVTTVLG 289 >gi|288554810|ref|YP_003426745.1| amino acid ABC transporter permease [Bacillus pseudofirmus OF4] gi|288545970|gb|ADC49853.1| amino acid ABC transporter permease [Bacillus pseudofirmus OF4] Length = 233 Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 52/165 (31%), Positives = 89/165 (53%), Gaps = 18/165 (10%) Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIA----LSCYTAAFIAEIVR 286 G P LV I + L++ PVLG EF S +A +S AA+ AE+VR Sbjct: 75 GTPLLVFI---FILYYGIPVLGV-----------EFKSAIVAGIVGISLNFAAYNAEVVR 120 Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346 S +++VPRGQ EAA +L +++ + R V++PQA R +PP + +++++K +SLA + Sbjct: 121 SAIMSVPRGQWEAAASLQMSYVQTLRRVIIPQATRIALPPTFNIFMDIVKGTSLASVITV 180 Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 +L+ + +T ++ + + IY + I+I F RL + Sbjct: 181 QELLYSSRLVAGRTFDSMTMYITAALIYWVVCIIIGYFQERLEKR 225 >gi|296139502|ref|YP_003646745.1| polar amino acid ABC transporter inner membrane subunit [Tsukamurella paurometabola DSM 20162] gi|296027636|gb|ADG78406.1| polar amino acid ABC transporter, inner membrane subunit [Tsukamurella paurometabola DSM 20162] Length = 298 Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 38/88 (43%), Positives = 60/88 (68%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F ++ L+ Y + IAEI+RSG+ ++P+GQ EAA ALGL + RL+LLPQA+ +++P Sbjct: 166 FAAVVFGLTMYNGSVIAEIIRSGINSLPKGQSEAASALGLRKSQLMRLILLPQAITAMLP 225 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVG 353 L SQ + LK+S+L +G+ ++V G Sbjct: 226 ALISQMVVALKDSALGYIIGYTEIVRQG 253 Score = 45.1 bits (105), Expect = 0.020, Method: Compositional matrix adjust. Identities = 31/109 (28%), Positives = 56/109 (51%), Gaps = 13/109 (11%) Query: 51 NMEKSNLSLGIGFLSERAGFEI-------DQGIVPYTS-----DSSYATAILV-GFVNTF 97 ++ + + IGF++ F + ++G + ++ DS + T L+ G T Sbjct: 39 KQQRRDTVVAIGFVAAMFAFAVWVLWVMGNKGQLEWSKWDMIVDSRFWTTYLIPGLWGTL 98 Query: 98 WLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIF 146 A ++ A ++GT++G GRLS ++ V WI VE+FR IP L++I Sbjct: 99 LAAVVSIVLAMVLGTVLGLGRLSDHRGVRWISGAVVELFRAIPVLILIL 147 >gi|16077406|ref|NP_388219.1| ABC transporter permease [Bacillus subtilis subsp. subtilis str. 168] gi|221308149|ref|ZP_03589996.1| hypothetical protein Bsubs1_01883 [Bacillus subtilis subsp. subtilis str. 168] gi|221312474|ref|ZP_03594279.1| hypothetical protein BsubsN3_01891 [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221317407|ref|ZP_03598701.1| hypothetical protein BsubsJ_01878 [Bacillus subtilis subsp. subtilis str. JH642] gi|221321670|ref|ZP_03602964.1| hypothetical protein BsubsS_01909 [Bacillus subtilis subsp. subtilis str. SMY] gi|321314008|ref|YP_004206295.1| putative ABC transporter permease [Bacillus subtilis BSn5] gi|1175692|sp|P42399|YCKA_BACSU RecName: Full=Probable amino-acid ABC transporter permease protein yckA gi|710628|dbj|BAA06425.1| homologue of glutamine permease of H. influenzae [Bacillus subtilis] gi|1805409|dbj|BAA08971.1| yckA [Bacillus subtilis] gi|2632623|emb|CAB12131.1| putative ABC transporter (permease) [Bacillus subtilis subsp. subtilis str. 168] gi|320020282|gb|ADV95268.1| putative ABC transporter (permease) [Bacillus subtilis BSn5] Length = 226 Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 59/172 (34%), Positives = 96/172 (55%), Gaps = 13/172 (7%) Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281 LYIS + G+P LV++ + L+F P +G I S V+ I S +AA+I Sbjct: 65 LYIS--FMRGVPILVIL---FILYFGFPYIG----IEFSAVTAAL----IGFSLNSAAYI 111 Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341 AEI RS + +V +GQ EAA +LGL++ + R ++LPQ++R +PPL + L+L+K SSLA Sbjct: 112 AEINRSAISSVEKGQWEAASSLGLSYWQTMRGIILPQSIRIALPPLANVLLDLIKASSLA 171 Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393 + +L+ I + + + ++ IY ++ + A+F N L K A Sbjct: 172 AMITVPELLQHAKIIGGREFDYMTMYILTALIYWAICSIAAVFQNILEKKYA 223 Score = 40.8 bits (94), Expect = 0.36, Method: Compositional matrix adjust. Identities = 19/61 (31%), Positives = 33/61 (54%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 ++ G T ++F M T+IG + R+S L+ W ++Y+ R +P LV++F L Sbjct: 23 VIKGIGYTLLISFVSMFAGTVIGLFISLARMSKLALLRWPAKLYISFMRGVPILVILFIL 82 Query: 149 Y 149 Y Sbjct: 83 Y 83 >gi|187730568|ref|YP_001881002.1| glutamine ABC transporter permease [Shigella boydii CDC 3083-94] gi|301020697|ref|ZP_07184765.1| glutamine ABC transporter permease protein [Escherichia coli MS 69-1] gi|187427560|gb|ACD06834.1| glutamine ABC transporter, permease protein [Shigella boydii CDC 3083-94] gi|300398508|gb|EFJ82046.1| glutamine ABC transporter permease protein [Escherichia coli MS 69-1] Length = 219 Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 57/198 (28%), Positives = 108/198 (54%), Gaps = 12/198 (6%) Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256 G+V+ L A +R F + L++I +I G P +V + Y F P+ FN Sbjct: 33 GLVIGLLAG-FARTFGGWIANHVALVFIE--VIRGTPIVVQVMFIY---FALPM--AFND 84 Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316 + + P F + + + + A+IAEI R ++++ +G EA +ALGL+ + R ++L Sbjct: 85 L---RIDP-FTAAVVTIMINSGAYIAEITRGAVLSIHKGFREAGLALGLSRWETIRYIIL 140 Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376 P A+R ++PPL +Q++ +K++SL + +G A+L G II +A+EI YL Sbjct: 141 PLALRRMLPPLGNQWIISIKDTSLFIVIGVAELTRQGQEIIAGNFRALEIWSAVAVFYLI 200 Query: 377 LSIMIALFMNRLNAKIAL 394 ++++++ + RL ++ + Sbjct: 201 ITLVLSFILRRLERRMKI 218 >gi|297156743|gb|ADI06455.1| putative glutamate ABC transporter permease protein [Streptomyces bingchenggensis BCW-1] Length = 313 Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 61/205 (29%), Positives = 107/205 (52%), Gaps = 33/205 (16%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEK---TG-----KALPLLYISTFLIFGLPTLVLIALKY 242 V S LG+VL++ RLS H + TG +A+PLL I+ L L L Y Sbjct: 79 VLSLALGVVLAV--GRLSDHKWVRLFTTGFIELFRAVPLL----ITIYALWVLFL---TY 129 Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302 + F G T EF +L + L+ Y + AE++R+G+ +VP+GQ EAA A Sbjct: 130 K--------NDLGFTGDGT---EFWALVVGLTIYNGSVQAEVLRAGINSVPKGQSEAAYA 178 Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS-----VGGTII 357 LG+ + +L+PQ +R+++P + SQ + LK++SL + + +L+ T++ Sbjct: 179 LGMRKTQVMVTILIPQGVRAMLPTIISQLVVTLKDTSLGYVITYQELLYKVQHIAEVTVV 238 Query: 358 NQTGQAIEIILIWMFIYLSLSIMIA 382 N +++I++ IY++L + ++ Sbjct: 239 NDESPYVQVIIVGGVIYVALCMALS 263 >gi|262403071|ref|ZP_06079631.1| ABC-type amino acid transport system permease component [Vibrio sp. RC586] gi|262350570|gb|EEY99703.1| ABC-type amino acid transport system permease component [Vibrio sp. RC586] Length = 265 Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 53/158 (33%), Positives = 85/158 (53%), Gaps = 14/158 (8%) Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268 R G+AL YI+ ++ P LV I L Y + PV+G F + Sbjct: 89 RQSRSLVGRALGTGYIA--VVRNTPLLVQIYLLYFVF--GPVIG----------LDRFAT 134 Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328 +AL+ + A+ AE+ R GL ++P+GQ EAA +LGL+ V+LPQ ++ +PPLT Sbjct: 135 AVLALALFQGAYTAEVFRGGLNSIPQGQYEAARSLGLSRFFTFYDVILPQLLQRTLPPLT 194 Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 ++ ++L+KNSS+ + DL + G I+++T EI Sbjct: 195 NEMVSLIKNSSIVSVMAIFDLTTQGRNIVSETAMPFEI 232 >gi|317054240|ref|YP_004118265.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea sp. At-9b] gi|316952235|gb|ADU71709.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea sp. At-9b] Length = 241 Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 56/185 (30%), Positives = 96/185 (51%), Gaps = 13/185 (7%) Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273 + GK L Y+ +L G P L +Q+ F VL F + F +AL Sbjct: 49 RAGKGLAFFYL--WLFRGTPVL------FQIIFVYNVLPGFGLRFSA-----FTCAVLAL 95 Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333 S A++AEI+RSGL AV GQ A +ALG+T+ + R ++LPQA R ++PP+ +Q ++ Sbjct: 96 SLNEGAYMAEILRSGLQAVKSGQRTAGMALGMTNAQIMRKIVLPQAARIVLPPMGNQMIS 155 Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393 +LK+S+L + +L+ V + + + E + YL L+ + +F + L + Sbjct: 156 MLKSSALVSVIAVQELLLVANQTASASFRYFEALCAAGIYYLLLTTLFMIFQSWLERTLD 215 Query: 394 LKEKK 398 K+++ Sbjct: 216 PKQRR 220 >gi|229194739|ref|ZP_04321530.1| Amino acid ABC transproter, permease [Bacillus cereus m1293] gi|228588750|gb|EEK46777.1| Amino acid ABC transproter, permease [Bacillus cereus m1293] Length = 233 Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 49/126 (38%), Positives = 74/126 (58%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IAL+ + A+I EI R + +V RGQMEAA +LG+ + A R ++LPQA R +PPL +Q Sbjct: 92 IALAIHNGAYITEIFRGSIQSVDRGQMEAARSLGMPYPLAMRRIVLPQAFRQSLPPLGNQ 151 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++ LK+SSL VG A+L G +I Q ++ +I YL L ++ +N L Sbjct: 152 FIIGLKDSSLVAYVGMAELWGSGLSIAAGNFQQLDTYIIVGLYYLVLVLLFTYLVNLLEK 211 Query: 391 KIALKE 396 ++ KE Sbjct: 212 RLQRKE 217 >gi|209549160|ref|YP_002281077.1| polar amino acid ABC transporter inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209534916|gb|ACI54851.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 384 Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 32/82 (39%), Positives = 59/82 (71%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I +S +T+A++AE++R GL A+P+GQ E A +LGL + + TRL+++PQA++ +IP + + Sbjct: 252 IGVSIFTSAYMAEVIRGGLQAIPKGQFEGADSLGLGYWQKTRLIIMPQAIKLVIPSIVNT 311 Query: 331 YLNLLKNSSLAVAVGFADLVSV 352 ++ K++SL +G DL+ + Sbjct: 312 FIGTFKDTSLVTIIGMFDLLGI 333 >gi|90414858|ref|ZP_01222824.1| putative amino acid ABC transporter, permease protein [Photobacterium profundum 3TCK] gi|90324036|gb|EAS40627.1| putative amino acid ABC transporter, permease protein [Photobacterium profundum 3TCK] Length = 315 Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 44/117 (37%), Positives = 68/117 (58%) Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312 Q G S + S + + +AA+IAEI+RSGL A+ +GQ EAA +LGL+ R Sbjct: 170 QHFLFGSSKLWENLFSGVLCVGLISAAYIAEIIRSGLDAIAKGQWEAADSLGLSRWSRFR 229 Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369 V+ PQA I+PPL Q+++L+K+SS+ + ++ VG + N +G EI L+ Sbjct: 230 DVIFPQAFAGIVPPLAGQFISLVKDSSIISLISIQEMTFVGSEMANSSGLIFEIWLL 286 >gi|270261784|ref|ZP_06190057.1| transporter [Serratia odorifera 4Rx13] gi|270045268|gb|EFA18359.1| transporter [Serratia odorifera 4Rx13] Length = 305 Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 59/201 (29%), Positives = 108/201 (53%), Gaps = 16/201 (7%) Query: 191 VFSFVLGIVLSLFATRLSRH--------FHEKTGKALPLLYISTFLIFGLPTLVLIALKY 242 +F F G++L+L RLS + F+ +A+P+L + FL + + AL Sbjct: 76 IFGFAGGVLLALM--RLSANPVLVAVSWFYTWFFRAVPML-VQLFLWYNIA-----ALYP 127 Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302 ++ P LG+ +T+ F + IAL + +A+ AEIVR+G+ +V GQ+EAA A Sbjct: 128 RISLWIPFLGEVASAPTNTIISTFSAAVIALVMHQSAYAAEIVRAGIQSVGSGQLEAAKA 187 Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362 LG + V+LPQAMR+I+PP ++ + LK +++ + D++ I +T + Sbjct: 188 LGYRRGQILWRVVLPQAMRTILPPAGNEVIGQLKTTAVVSVIALQDVLYSAQIIYQRTYE 247 Query: 363 AIEIILIWMFIYLSLSIMIAL 383 I ++L+ YL ++ ++++ Sbjct: 248 VIPLLLVATLWYLVMTSILSI 268 >gi|213967001|ref|ZP_03395151.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tomato T1] gi|301385185|ref|ZP_07233603.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tomato Max13] gi|302062753|ref|ZP_07254294.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tomato K40] gi|302130126|ref|ZP_07256116.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213928323|gb|EEB61868.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tomato T1] Length = 220 Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 47/164 (28%), Positives = 90/164 (54%), Gaps = 11/164 (6%) Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292 P LVLI L Y F P LG + S + LS Y A++ E+ R+GL+++ Sbjct: 68 PILVLILLIY---FALPGLG--------IRLDKLASFVVTLSLYAGAYLTEVFRAGLLSI 116 Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352 +GQ EA +A+GL+ + +++P +R+++P L++ +++L K++SLA A+ +L Sbjct: 117 HKGQREAGLAIGLSEWQVRAYIIVPVMLRNVLPALSNNFISLFKDTSLAAAIAVPELTYY 176 Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 I ++ + IE L+ +Y+ +IA+ + L ++A++ Sbjct: 177 ARKINVESYRVIETWLVTTALYVVACYVIAMLLRTLEQRLAIRR 220 >gi|76801539|ref|YP_326547.1| glutamine/glutamate/polar amino acids ABC transporter permease [Natronomonas pharaonis DSM 2160] gi|76557404|emb|CAI48981.1| ABC-type transport system permease protein II 2 (probable substrates glutamine/glutamate/polar amino acids) [Natronomonas pharaonis DSM 2160] Length = 325 Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 62/207 (29%), Positives = 113/207 (54%), Gaps = 12/207 (5%) Query: 195 VLGIVLSLFAT---RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251 VLG+ +F ++R + + + L L Y T LI G P L+A + L++ P+ Sbjct: 113 VLGMFFGIFIAVPLSVARVYGSRPLRWLSLAY--TELIRGTP---LLAQLFVLYYGLPLS 167 Query: 252 GQFNFIGGSTVSP-EFMSLYIALSCYT---AAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307 G + G V P ++++A+ +T +A+ AE +RS L +V GQ+ AA ++GL+ Sbjct: 168 GIIRELPGVGVGPVPRAAVWVAVIGFTINSSAYQAEYIRSALQSVDAGQLTAARSVGLSK 227 Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367 ++ R V+LPQ +R IP T++++ L+K SSLA + +L I + T + +E+ Sbjct: 228 TESIRHVILPQGLRYAIPGWTNEFIYLIKYSSLAAFIAVPELFRRARNIGSDTFRYLEMY 287 Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIAL 394 LI YL+L + +++ M+ ++A+ Sbjct: 288 LIVALFYLALVLTLSVLMDSFEKRVAI 314 >gi|51893760|ref|YP_076451.1| amino acid ABC transporter permease protein [Symbiobacterium thermophilum IAM 14863] gi|51857449|dbj|BAD41607.1| amino acid ABC transporter permease protein [Symbiobacterium thermophilum IAM 14863] Length = 268 Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 61/218 (27%), Positives = 109/218 (50%), Gaps = 12/218 (5%) Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240 +T+ +A +F ++G+V L +R + L LY+ ++ G P LV + L Sbjct: 62 ITLQISALGILFGTLIGLVAGLLRSRKPSNLILWALYGLATLYVE--VVRGTPFLVQLYL 119 Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300 Y F F+ G + P + IALS + A++AEI R + ++ RGQMEA Sbjct: 120 MYYGPF---------FLFGIDL-PAMTAGTIALSLNSGAYVAEIFRGAIESIDRGQMEAG 169 Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 +LGLT + R ++LPQA R +PPL +++ +L+K SS+ +G AD++ T+ Sbjct: 170 RSLGLTFAQTMRHIILPQAFRRALPPLANEFASLIKESSVISVLGVADIMFKTKTVGTAH 229 Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 + +L+ YL L+ + + + L ++ + + Sbjct: 230 FAMFQALLVAAVYYLVLTGITSQLVRLLERRLGKSDSR 267 >gi|330808727|ref|YP_004353189.1| putative amino acid ABC transporter, permease component [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327376835|gb|AEA68185.1| putative amino acid ABC transporter, permease component [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 220 Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 56/167 (33%), Positives = 88/167 (52%), Gaps = 11/167 (6%) Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287 LI G P VL+ + + P LG IG F + + L+ + + +AEIVR Sbjct: 64 LIRGTPVFVLVLACF---YMAPALGWQ--IGA------FQAGVLGLTLFCGSHVAEIVRG 112 Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347 L A+PRGQMEA+ A+GLT ++ VLLPQA+R I+P + ++K S+L +G A Sbjct: 113 ALQALPRGQMEASQAIGLTFYQSLGYVLLPQALRQILPTWVNSSTEIVKASTLLSVIGVA 172 Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394 +L+ II +T +E L F++ ++ I L + ++AL Sbjct: 173 ELLLSTQQIIARTFMTLEFYLFAGFLFFIINYAIELLGRHIEKRVAL 219 >gi|269954910|ref|YP_003324699.1| polar amino acid ABC transporter inner membrane subunit [Xylanimonas cellulosilytica DSM 15894] gi|269303591|gb|ACZ29141.1| polar amino acid ABC transporter, inner membrane subunit [Xylanimonas cellulosilytica DSM 15894] Length = 318 Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 45/114 (39%), Positives = 70/114 (61%), Gaps = 1/114 (0%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + + L+ AA++AEIVR+GL +V GQ EAA ALG+ R ++LPQAMR I+P Sbjct: 148 FWAALLGLAFNEAAYLAEIVRAGLTSVDPGQAEAAKALGMKDTTILRRIVLPQAMRVIVP 207 Query: 326 PLTSQYLNLLKNSSLAVAVGFA-DLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378 P ++ +++LK +SL +AV F DL I N+ Q I ++++ YL ++ Sbjct: 208 PTGNETISMLKTTSLVIAVPFTLDLFYATSAIGNRLYQPIPLLVVASIWYLVIT 261 >gi|15893407|ref|NP_346756.1| glutamine-binding periplasmic protein fused to glutamine permease [Clostridium acetobutylicum ATCC 824] gi|15022937|gb|AAK78096.1|AE007524_1 Glutamine-binding periplasmic protein fused to glutamine permease [Clostridium acetobutylicum ATCC 824] Length = 477 Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 48/158 (30%), Positives = 85/158 (53%), Gaps = 23/158 (14%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 + PLL + F+ FG+P L G ++P + IA+S Sbjct: 323 RGTPLLVQAFFIFFGIPGL----------------------SGLKINPVVAGI-IAVSLN 359 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 A+++EI R G++++ +GQMEAA +LG+ +R A ++ PQA++ +IP + +Q++ LK Sbjct: 360 AGAYMSEIFRGGILSINQGQMEAARSLGIPYRTAMLKIVFPQAVKVMIPSIVNQFIISLK 419 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374 ++S+ +G +L + G II T +A +I LI +Y Sbjct: 420 DTSILSVIGIQELTNTGQIIIGATFKAFQIWLIVAIMY 457 >gi|329906186|ref|ZP_08274377.1| Glutamate Aspartate transport system permease protein gltJ [Oxalobacteraceae bacterium IMCC9480] gi|327547319|gb|EGF32155.1| Glutamate Aspartate transport system permease protein gltJ [Oxalobacteraceae bacterium IMCC9480] Length = 247 Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 39/86 (45%), Positives = 60/86 (69%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F++ I L +T++ +A V +G+ A+PRGQ A ALGLT + R VLLP A R ++P Sbjct: 108 FITAVICLGFFTSSRVAVQVSAGIQALPRGQTLAGTALGLTLPQTYRHVLLPMAFRIVLP 167 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVS 351 PLTS++LN++KNSS+A+ +G +L + Sbjct: 168 PLTSEFLNIIKNSSVALTIGLMELTA 193 Score = 41.2 bits (95), Expect = 0.32, Method: Compositional matrix adjust. Identities = 25/75 (33%), Positives = 38/75 (50%) Query: 83 SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142 +Y ++ G V T A + + A IG +VG R N+ + YVE+FRNIP L Sbjct: 19 GTYMDTLVSGLVWTLATALTAWVMALFIGAIVGTIRTMPNRWAVRLANGYVELFRNIPLL 78 Query: 143 VVIFFLYKSVLSVLP 157 V +F Y + ++P Sbjct: 79 VQMFLWYFVMPELVP 93 >gi|258623749|ref|ZP_05718708.1| polar amino acid ABC transporter, permease protein [Vibrio mimicus VM603] gi|258583967|gb|EEW08757.1| polar amino acid ABC transporter, permease protein [Vibrio mimicus VM603] Length = 265 Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 53/158 (33%), Positives = 85/158 (53%), Gaps = 14/158 (8%) Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268 R G+AL YI+ ++ P LV I L Y + PV+G F + Sbjct: 89 RQSRSLVGRALGTGYIA--VVRNTPLLVQIYLLYFVF--GPVIG----------LDRFAT 134 Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328 +AL+ + A+ AE+ R GL ++P+GQ EAA +LGL+ V+LPQ ++ +PPLT Sbjct: 135 AVLALALFQGAYTAEVFRGGLNSIPQGQYEAARSLGLSRFFTFYDVILPQLLQRTLPPLT 194 Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 ++ ++L+KNSS+ + DL + G I+++T EI Sbjct: 195 NEMVSLIKNSSIVSVMAIFDLTTQGRNIVSETAMPFEI 232 >gi|241895266|ref|ZP_04782562.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Weissella paramesenteroides ATCC 33313] gi|241871572|gb|EER75323.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Weissella paramesenteroides ATCC 33313] Length = 494 Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 42/132 (31%), Positives = 77/132 (58%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F++ IA+ +AA++AEI+RSG+ AVP GQ EAA +LG T + R ++LPQA+++I+P Sbjct: 360 FLAGAIAMFLNSAAYVAEIIRSGIQAVPDGQTEAARSLGFTKNQTMRYMILPQAIKNILP 419 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 L ++++ ++K S+ +G +L + + + ++I IY L+ I+ + Sbjct: 420 ALGNEFVTVIKEGSVVSVIGVGELTFQASVVQGASFKPFLPLVITAAIYFILTFGISRLL 479 Query: 386 NRLNAKIALKEK 397 N K+ +K Sbjct: 480 NLFEKKLHKSDK 491 >gi|86153193|ref|ZP_01071397.1| amino acid ABC tansporter, permease protein, His/Glu/Gln/Arg/opine family [Campylobacter jejuni subsp. jejuni HB93-13] gi|88597558|ref|ZP_01100792.1| amino acid ABC tansporter, permease protein, His/Glu/Gln/Arg/opine family [Campylobacter jejuni subsp. jejuni 84-25] gi|218562521|ref|YP_002344300.1| putative amino acid ABC tansporter permease [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|85842919|gb|EAQ60130.1| amino acid ABC tansporter, permease protein, His/Glu/Gln/Arg/opine family [Campylobacter jejuni subsp. jejuni HB93-13] gi|88190150|gb|EAQ94125.1| amino acid ABC tansporter, permease protein, His/Glu/Gln/Arg/opine family [Campylobacter jejuni subsp. jejuni 84-25] gi|112360227|emb|CAL35022.1| putative amino acid ABC tansporter permease protein [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|284926135|gb|ADC28487.1| amino acid ABC transporter permease [Campylobacter jejuni subsp. jejuni IA3902] Length = 247 Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 38/94 (40%), Positives = 69/94 (73%), Gaps = 5/94 (5%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +AL ++A+IAEIVRSG+ +V +GQMEAA A+GL ++ + + ++LPQA ++I+P L ++ Sbjct: 123 LALGLNSSAYIAEIVRSGINSVDKGQMEAARAMGLDYKTSMKEIILPQATKNILPALANE 182 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364 +++L K +S+ VGF ++ + T+ +Q+ QA+ Sbjct: 183 FISLFKETSV---VGFISVIDI--TMQSQSLQAV 211 >gi|229168897|ref|ZP_04296614.1| Arginine transport system permease protein artQ [Bacillus cereus AH621] gi|228614489|gb|EEK71597.1| Arginine transport system permease protein artQ [Bacillus cereus AH621] Length = 219 Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 39/129 (30%), Positives = 78/129 (60%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P F++ +A S + A+++E++R+G+ AV +GQ EAA+ALG+ + K + ++ PQA+++I Sbjct: 87 PAFLAAVLAFSLNSGAYMSEVIRAGIQAVDKGQTEAAMALGIPYGKMMKNIIFPQALKNI 146 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 +P L +++ L K S++ +G DL+ + +T + +E +L IY L I++ L Sbjct: 147 LPALVNEFATLTKESAVVTVIGATDLMRRAYIVGGETFKYLEPLLFVGLIYYMLVIILTL 206 Query: 384 FMNRLNAKI 392 + ++ Sbjct: 207 VGKAIEGRM 215 >gi|167043235|gb|ABZ07942.1| putative binding-protein-dependent transport system inner membrane component [uncultured marine microorganism HF4000_ANIW141L21] Length = 774 Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 43/126 (34%), Positives = 72/126 (57%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 ++S AL + A+ E +R + A+P GQMEA ++GL + + R V++PQA+R IP Sbjct: 637 YISAIFALGLNSGAYQCETIRGAIAAIPSGQMEAGRSIGLNYMQTMRRVIMPQAIRICIP 696 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 P+ ++ +NL+ NSSLA+ +G+A+L G I T Q + + Y ++ +AL + Sbjct: 697 PMGNEMVNLVLNSSLAMVIGYAELTRKGKLAIAITWQVFWGWGMVLISYFIVTWTLALLL 756 Query: 386 NRLNAK 391 L K Sbjct: 757 RYLENK 762 >gi|146340447|ref|YP_001205495.1| amino acid ABC transporter membrane protein [Bradyrhizobium sp. ORS278] gi|146193253|emb|CAL77269.1| putative amino acid transport protein (ABC superfamily, membrane) [Bradyrhizobium sp. ORS278] Length = 222 Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 44/114 (38%), Positives = 65/114 (57%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P ++ LS Y AF AEI+R + +VPRGQ +AA ALGL + RLV+LPQA++ + Sbjct: 89 PAHVAAVTVLSLYGGAFYAEIIRGSIESVPRGQWDAARALGLRPWRMMRLVILPQALKPM 148 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377 + P +Q + LKN+SL + DLV I T + +E+ I IY ++ Sbjct: 149 LAPYVNQSVTQLKNTSLVSVIAVPDLVYNATLINADTYRPLEVYTIIAIIYFAI 202 Score = 37.4 bits (85), Expect = 4.0, Method: Compositional matrix adjust. Identities = 28/90 (31%), Positives = 44/90 (48%), Gaps = 10/90 (11%) Query: 82 DSSYATAILVGFVNTFWLAFSGMIP--------ATIIGTLVGAGRLSANKLVAWICRVYV 133 + ++ AIL + + FW+ + TIIG LVG RL ++ W+ Y+ Sbjct: 2 NYTWDFAILGKYSHLFWVGLGWTMAYTLGTVLLGTIIGLLVGIIRLRRPVVIDWLLIAYI 61 Query: 134 EVFRNIPPLVVIFFLYKS--VLSVLPIPDH 161 E+FR P LV I + Y + V+ + IP H Sbjct: 62 ELFRCTPLLVQIIWFYYAFPVVIGINIPAH 91 >gi|15888723|ref|NP_354404.1| ABC transporter, membrane spanning protein (amino acid) [Agrobacterium tumefaciens str. C58] gi|15156465|gb|AAK87189.1| ABC transporter, membrane spanning protein (amino acid) [Agrobacterium tumefaciens str. C58] Length = 217 Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 39/114 (34%), Positives = 67/114 (58%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P ++ ++LS Y +A++AEI R + AVP+ Q EA+ +L LT + R V+LPQA+R Sbjct: 83 PPLLAASVSLSVYVSAYLAEIWRGSIQAVPKPQWEASASLALTRFQQYRYVILPQALRLS 142 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377 +PP + L+KN+S+ VGF +L G + N T + ++ + +Y ++ Sbjct: 143 LPPTVGFLVQLVKNTSIVSVVGFVELSRAGQLVNNATFRPFQVFFVVALLYFAI 196 >gi|159904018|ref|YP_001551362.1| ABC-type amino acid transport system, permease component [Prochlorococcus marinus str. MIT 9211] gi|159889194|gb|ABX09408.1| ABC-type amino acid transport system, permease component [Prochlorococcus marinus str. MIT 9211] Length = 339 Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 63/222 (28%), Positives = 113/222 (50%), Gaps = 18/222 (8%) Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239 TLT+ A + +F LG++ ++ R S HF K Y+S I L + LIA Sbjct: 132 TLTLFLMASSALIAFPLGMIFAI--GRQSEHFLIK--------YLSAIYIDTLRAIPLIA 181 Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299 + + P+ F G ++ + IA + + +A++AE +R GL A+P Q+EA Sbjct: 182 ILFFGQLLIPLFLPF----GLEIN-RVLRAVIAFALFVSAYVAEDIRGGLQAIPTSQIEA 236 Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359 A ALGLT + + ++LPQA+ IP L +Q + LL+N+SL +G +L+ + +I+ Sbjct: 237 AKALGLTDFQIKQFIVLPQAITIAIPALANQAIGLLQNTSLMAILGLVELLGISRSILAN 296 Query: 360 T---GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 G+ +E+ + IY + +IA+ + ++ + + Sbjct: 297 PEFIGRYVEVYVWLALIYWLVCTVIAILSRHIEQRMKIGKSH 338 >gi|310829835|ref|YP_003962192.1| amino acid ABC transporter [Eubacterium limosum KIST612] gi|308741569|gb|ADO39229.1| amino acid ABC transporter [Eubacterium limosum KIST612] Length = 218 Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 51/175 (29%), Positives = 87/175 (49%), Gaps = 20/175 (11%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 + PLL F+ FGLP L P +G+F V F + IA Sbjct: 61 RGTPLLLQLMFVYFGLPLL-------------PGVGKF------LVFDRFSAACIAFGLN 101 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 AA+ AEI R GL+A+ +GQ EA+ LGLT + V++PQ +R +P ++++ + LLK Sbjct: 102 YAAYFAEIFRGGLLAIDKGQYEASKVLGLTKFETMTRVVIPQMIRVCLPSISNETITLLK 161 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 +++L +G A+++ T +N+ + + IYL ++ ++ +L K Sbjct: 162 DTALVTTIGVAEIIHYAKTAVNRDANPFAFV-VAAAIYLVINFVLTFIFKKLEKK 215 >gi|301629417|ref|XP_002943836.1| PREDICTED: hypothetical protein LOC100485408 [Xenopus (Silurana) tropicalis] Length = 502 Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 66/207 (31%), Positives = 109/207 (52%), Gaps = 12/207 (5%) Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252 +++LGIVL F L+R + + +YI F LP LVL+ Y L P + Sbjct: 31 TWLLGIVLGFFLA-LARQSELRWLRNSAGVYIWFFR--SLPLLVLLIFVYNL----PQV- 82 Query: 253 QFNFIGGSTV-SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311 F S V S + + IAL AA+IAEI R GL+AV +GQ EA ALG+ +R Sbjct: 83 ---FPSTSVVLSNPYSAGLIALVLSEAAYIAEIHRGGLLAVVKGQREAGKALGVGYRGVQ 139 Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371 RL+++PQA+R +P L ++Y+ ++K +SL + ++++ VG + Q +E +L Sbjct: 140 RLIVVPQALRVALPTLANEYITIVKLTSLVSVISLSEILLVGQQLYTQNFLVMETMLAVA 199 Query: 372 FIYLSLSIMIALFMNRLNAKIALKEKK 398 F Y+ + + + + L + + +K Sbjct: 200 FYYVFIVTVFSWLLRVLENHLDVTRRK 226 >gi|257460118|ref|ZP_05625222.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Campylobacter gracilis RM3268] gi|257442559|gb|EEV17698.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Campylobacter gracilis RM3268] Length = 222 Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 54/201 (26%), Positives = 109/201 (54%), Gaps = 14/201 (6%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 + SF+LG+VL++ T ++R + K K L +YI F G P LV + + ++F P+ Sbjct: 31 IISFLLGLVLAVL-TAVARIANFKILKQLSEIYIWIFR--GTPLLVQL---FIVYFGLPI 84 Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 +G + + + I S A+ +E VR+ +++VP+GQ EAA +LG+++ + Sbjct: 85 VGITLDVWAAAI--------ITFSLNIGAYASEAVRAAILSVPKGQWEAATSLGMSYAQI 136 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370 R ++ PQA R +PPL++ +++ LK++SL ++ D+ V I + + + ++ Sbjct: 137 LRRIIAPQAARISLPPLSNIFISTLKDTSLVASITMVDMFMVAQRIAARAFDPLTLYVLA 196 Query: 371 MFIYLSLSIMIALFMNRLNAK 391 YL++ ++ ++L + Sbjct: 197 ALFYLAVCTLLTFLQSKLERR 217 >gi|218887772|ref|YP_002437093.1| polar amino acid ABC transporter inner membrane protein [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218758726|gb|ACL09625.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 316 Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 51/142 (35%), Positives = 78/142 (54%), Gaps = 14/142 (9%) Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268 R + G+AL + Y+ T + P L+ + + Y PVLG F G Sbjct: 143 RQSGSRVGRALAVAYVET--VRNTPLLIQLFVVY--FVLAPVLGLGRFAAG--------- 189 Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328 +ALS + A+IAEI+R+G+++VP GQ EA+ +LG+ V+LPQA R+ +PPLT Sbjct: 190 -VLALSLFEGAYIAEILRAGILSVPTGQWEASRSLGMDVPGTYMEVVLPQAARTALPPLT 248 Query: 329 SQYLNLLKNSSLAVAVGFADLV 350 Q ++L+K+SSL + DL Sbjct: 249 GQLVSLVKDSSLVSTIALHDLA 270 >gi|153827815|ref|ZP_01980482.1| amino acid ABC transporter, permease protein [Vibrio cholerae 623-39] gi|148876660|gb|EDL74795.1| amino acid ABC transporter, permease protein [Vibrio cholerae 623-39] Length = 266 Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 53/158 (33%), Positives = 85/158 (53%), Gaps = 14/158 (8%) Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268 R H G+AL YI+ ++ P LV I L Y + PV+G F + Sbjct: 90 RQSHSLVGRALGTGYIA--VVRNTPLLVQIYLLYFVF--GPVIGL----------DRFAT 135 Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328 +AL+ + A+ AE+ R GL ++ +GQ EAA +LGL+ V+LPQ ++ +PPLT Sbjct: 136 AVLALALFQGAYTAEVFRGGLNSIAQGQYEAARSLGLSRFFTFYDVILPQLLQRTLPPLT 195 Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 ++ ++L+KNSS+ + DL + G I+++T EI Sbjct: 196 NEMVSLIKNSSIVSVMAIFDLTTQGRNIVSETAMPFEI 233 >gi|104783490|ref|YP_609988.1| general amino acid ABC transporter permease [Pseudomonas entomophila L48] gi|95112477|emb|CAK17204.1| general amino acid ABC transporter, permease protein [Pseudomonas entomophila L48] Length = 365 Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 39/94 (41%), Positives = 63/94 (67%), Gaps = 6/94 (6%) Query: 264 PEFMSL------YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317 PE MS I + + +A+IAE+VR GL A+P+GQ EAA A+GL + +A LV+LP Sbjct: 222 PEGMSFDKLLRAMIGVILFQSAYIAEVVRGGLQAIPKGQYEAAAAMGLGYWRAMGLVILP 281 Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 QA++ +IP + + ++ L K++SL + +G DL++ Sbjct: 282 QALKLVIPGIVNTFIALFKDTSLVIIIGLFDLLN 315 >gi|325685063|gb|EGD27198.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus delbrueckii subsp. lactis DSM 20072] Length = 485 Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 67/258 (25%), Positives = 116/258 (44%), Gaps = 34/258 (13%) Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI--FVFSFVLGIVL 200 +V + K + + D SI+ G+ +N G L M I + + V G++L Sbjct: 252 IVNKYTSKKAVKSQVVADTSIL---GLIKDNAGALLQGLWMTIELSIVGILAALVFGLIL 308 Query: 201 SLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQF 254 + + +H + +P++ ++ F+ G+PTL L ++L Sbjct: 309 GIMGIAEHKFWHGLANVIIYIFRGIPMMVLAFFIYIGMPTL----LGHKL---------- 354 Query: 255 NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLV 314 P F + + L A+I IVR G +V GQ EAA +LGL + KA V Sbjct: 355 ---------PLFTAGILTLMLDEGAYIGAIVRGGFESVDVGQWEAARSLGLPYYKALWKV 405 Query: 315 LLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374 + PQ + +IP L +Q++ LK++S+ A+G DL G +I Q Q ++ LI +Y Sbjct: 406 VAPQGFKLMIPSLVNQFIITLKDTSILSAIGVMDLTQTGANLIAQNFQGFKMWLIIAVMY 465 Query: 375 LSLSIMIALFMNRLNAKI 392 L + ++ N + K+ Sbjct: 466 LIIITLLTWLSNYIQKKM 483 >gi|152970960|ref|YP_001336069.1| amino acid ABC transporter membrane protein [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238895476|ref|YP_002920211.1| putative amino-acid ABC transport system permease component [Klebsiella pneumoniae NTUH-K2044] gi|262043450|ref|ZP_06016573.1| L-cystine ABC superfamily ATP binding cassette transporter [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|330000993|ref|ZP_08303864.1| ABC transporter, permease protein [Klebsiella sp. MS 92-3] gi|150955809|gb|ABR77839.1| putative amino acid transport protein (ABC superfamily, membrane) [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238547793|dbj|BAH64144.1| putative amino-acid ABC transport system permease component [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] gi|259039192|gb|EEW40340.1| L-cystine ABC superfamily ATP binding cassette transporter [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|328537828|gb|EGF64022.1| ABC transporter, permease protein [Klebsiella sp. MS 92-3] Length = 222 Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 62/207 (29%), Positives = 109/207 (52%), Gaps = 18/207 (8%) Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251 F VLG +L+L R+S + K L +YIS F G P LIA + +++ P Sbjct: 32 FGLVLGFILALM--RMSPVWPVKW---LARMYISIFR--GTP---LIAQLFMIYYGLP-- 79 Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311 QF G + P + I LS TAA+ AE +R+ + ++ +GQ EAA ++G+T + Sbjct: 80 -QF----GIELDP-IPAAMIGLSLNTAAYAAETLRAAIASIDKGQWEAAASIGMTPWQTM 133 Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371 R +LPQA R +PPL++ +++L+K++SLA + +L I ++T + + L Sbjct: 134 RRAILPQAARVALPPLSNSFISLVKDTSLAATIQVPELFRQAQLITSRTLEVFTMYLAAS 193 Query: 372 FIYLSLSIMIALFMNRLNAKIALKEKK 398 IY ++ +++ N ++ +E+ Sbjct: 194 LIYWVMATVLSSLQNYFENQLNRQERD 220 Score = 39.3 bits (90), Expect = 1.0, Method: Compositional matrix adjust. Identities = 28/97 (28%), Positives = 47/97 (48%), Gaps = 8/97 (8%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G V T L+ GM ++G ++ R+S V W+ R+Y+ +FR P + +F + Sbjct: 15 LLKGAVFTLQLSIGGMFFGLVLGFILALMRMSPVWPVKWLARMYISIFRGTPLIAQLFMI 74 Query: 149 YKSV----LSVLPIPDHSIVLPFGMFLNNRGLSFPTL 181 Y + + + PIP I G+ LN + TL Sbjct: 75 YYGLPQFGIELDPIPAAMI----GLSLNTAAYAAETL 107 >gi|89099965|ref|ZP_01172836.1| amino acid ABC transporter, permease protein [Bacillus sp. NRRL B-14911] gi|89085357|gb|EAR64487.1| amino acid ABC transporter, permease protein [Bacillus sp. NRRL B-14911] Length = 214 Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 62/196 (31%), Positives = 103/196 (52%), Gaps = 26/196 (13%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF---LIFGLPTLVLIALKYQLHFD 247 +F F++G++ +LF RLS PL +I+ + L+ G P LV QL F Sbjct: 27 LFGFIIGLITALF--RLS--------PIPPLRWIAIWFINLVRGTPFLV------QLFFI 70 Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307 L +FI V+ + ++ A+IAEI+R+G+ ++ +GQ EAA LGLT Sbjct: 71 YFGLNSLSFISLEPVTAGI----VGVAINAGAYIAEIIRAGIQSIDKGQTEAARTLGLTS 126 Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367 + R ++LPQA+R ++P +Q + LK++SL +G A+L G +++ T + + Sbjct: 127 TQTMRYIILPQALRRMLPTFVNQAIISLKDTSLLSVIGIAELTQRGQVVVSATYEPFK-- 184 Query: 368 LIWMFIYLSLSIMIAL 383 IW + L I+I L Sbjct: 185 -IWGMVALMYFILIYL 199 >gi|115524737|ref|YP_781648.1| polar amino acid ABC transporter, inner membrane subunit [Rhodopseudomonas palustris BisA53] gi|115518684|gb|ABJ06668.1| polar amino acid ABC transporter, inner membrane subunit [Rhodopseudomonas palustris BisA53] Length = 500 Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 39/96 (40%), Positives = 62/96 (64%) Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315 F+ G+ + + I ++ + A+ AE+VR GL A+PRGQ EA+ ALGL++ K T L++ Sbjct: 353 FLPGNFTVDGMVRVLIGIALFAGAYNAEVVRGGLQAIPRGQAEASSALGLSYWKTTGLIV 412 Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 LPQA+R +IP L + ++ L K++SL V DL+ Sbjct: 413 LPQALRHVIPGLVNSFIALFKDTSLVSIVALFDLLG 448 >gi|157370602|ref|YP_001478591.1| polar amino acid ABC transporter inner membrane subunit [Serratia proteamaculans 568] gi|157322366|gb|ABV41463.1| polar amino acid ABC transporter, inner membrane subunit [Serratia proteamaculans 568] Length = 305 Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 59/201 (29%), Positives = 108/201 (53%), Gaps = 16/201 (7%) Query: 191 VFSFVLGIVLSLFATRLSRH--------FHEKTGKALPLLYISTFLIFGLPTLVLIALKY 242 +F F G++L+L RLS + F+ +A+P+L + FL + + AL Sbjct: 76 IFGFAGGVLLALM--RLSANPVLVAVSWFYTWFFRAVPML-VQLFLWYNIA-----ALYP 127 Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302 ++ P LG+ +T+ F + IAL + +A+ AEIVR+G+ +V GQ+EAA A Sbjct: 128 RISLWIPFLGEVASAPTNTIISTFSAAVIALVMHQSAYAAEIVRAGIQSVGSGQLEAAKA 187 Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362 LG + V+LPQAMR+I+PP ++ + LK +++ + D++ I +T + Sbjct: 188 LGYRRGQILWRVVLPQAMRTILPPAGNEVIGQLKTTAVVSVIALQDVLYSAQIIYQRTYE 247 Query: 363 AIEIILIWMFIYLSLSIMIAL 383 I ++L+ YL ++ ++++ Sbjct: 248 VIPLLLVATLWYLVMTSILSI 268 >gi|83950535|ref|ZP_00959268.1| glutamate/aspartate ABC transporter, permease protein [Roseovarius nubinhibens ISM] gi|83838434|gb|EAP77730.1| glutamate/aspartate ABC transporter, permease protein [Roseovarius nubinhibens ISM] Length = 218 Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 40/124 (32%), Positives = 73/124 (58%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F S IA + AA+ +EI+R+G+ ++ +GQ+ AA A+GL++ + R V+LPQA R++IP Sbjct: 90 FYSALIAFVMFEAAYYSEIIRAGIQSIRQGQVHAAQAVGLSYWQTQRYVVLPQAFRNMIP 149 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 L +Q + L +++SL V D ++ + G+ +E+ + +Y + +LF+ Sbjct: 150 ILVTQGIILFQDTSLVFVVSLRDFMTASSIVARTEGRLVEMYIFAALVYFVICFAGSLFV 209 Query: 386 NRLN 389 RL Sbjct: 210 RRLK 213 >gi|301050727|ref|ZP_07197586.1| ABC transporter, permease protein [Escherichia coli MS 185-1] gi|300297595|gb|EFJ53980.1| ABC transporter, permease protein [Escherichia coli MS 185-1] Length = 222 Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 62/207 (29%), Positives = 109/207 (52%), Gaps = 18/207 (8%) Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251 F +LG +L+L RLS + + L YIS F G P LIA + +++ P Sbjct: 32 FGLLLGFILALM--RLSPIWPVRW---LARFYISIFR--GTP---LIAQLFMIYYGLP-- 79 Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311 QF G + P S I LS TAA+ AE +R+ + ++ +GQ EAA ++G+T + Sbjct: 80 -QF----GIELDP-IPSAMIGLSLNTAAYAAETLRAAISSIDKGQWEAAASIGMTPWQTM 133 Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371 R +LPQA R +PPL++ +++L+K++SLA + +L I ++T + + L Sbjct: 134 RRAILPQAARGALPPLSNSFISLVKDTSLAATIQVPELFRQAQLITSRTLEVFTMYLAAS 193 Query: 372 FIYLSLSIMIALFMNRLNAKIALKEKK 398 IY ++ +++ N ++ +E++ Sbjct: 194 LIYWIMATVLSTLQNHFENQLNRQERE 220 Score = 37.0 bits (84), Expect = 5.3, Method: Compositional matrix adjust. Identities = 28/97 (28%), Positives = 45/97 (46%), Gaps = 8/97 (8%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G T L+ GM ++G ++ RLS V W+ R Y+ +FR P + +F + Sbjct: 15 LLKGAGYTLQLSIGGMFFGLLLGFILALMRLSPIWPVRWLARFYISIFRGTPLIAQLFMI 74 Query: 149 YKSV----LSVLPIPDHSIVLPFGMFLNNRGLSFPTL 181 Y + + + PIP I G+ LN + TL Sbjct: 75 YYGLPQFGIELDPIPSAMI----GLSLNTAAYAAETL 107 >gi|260461178|ref|ZP_05809427.1| polar amino acid ABC transporter, inner membrane subunit [Mesorhizobium opportunistum WSM2075] gi|259033212|gb|EEW34474.1| polar amino acid ABC transporter, inner membrane subunit [Mesorhizobium opportunistum WSM2075] Length = 230 Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 46/119 (38%), Positives = 74/119 (62%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IALS TAA+ +EI+R + VPRG +EAA A G+T + RLV+LP A+R IP +++ Sbjct: 102 IALSLNTAAYGSEILRGAIQGVPRGLVEAASAFGMTRLQTLRLVVLPLALRQAIPSYSNE 161 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 + ++K +SLA V ++ + +I+QT +AIE+ + IYL+++ I +N L Sbjct: 162 IILMVKGTSLASIVTLMEVTGIAQGLISQTYRAIEVFVAAGAIYLTINFTIISALNALE 220 >gi|229084062|ref|ZP_04216355.1| Amino acid ABC transporter [Bacillus cereus Rock3-44] gi|228699239|gb|EEL51931.1| Amino acid ABC transporter [Bacillus cereus Rock3-44] Length = 214 Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 49/157 (31%), Positives = 95/157 (60%), Gaps = 14/157 (8%) Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244 T + + +FV+GI+L++F T L+R + + + + +Y+S +I G P LV + + + Sbjct: 15 TTIPLSIITFVIGIILAIF-TALARISNSRILQWIARIYVS--IIRGTPLLVQL---FII 68 Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304 + P L + P + + I S A+ +EI+R+ ++++P+GQ EAA +G Sbjct: 69 FYGLPTLN-------IEIDP-YPAAVIGFSLNVGAYASEIIRASILSIPKGQWEAAYTIG 120 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341 +T+ +A + ++LPQA R IPPL++ +++L+K++SLA Sbjct: 121 MTYPQALKRIILPQATRVSIPPLSNTFISLVKDTSLA 157 >gi|206580951|ref|YP_002237707.1| amino acid ABC transporter, permease protein [Klebsiella pneumoniae 342] gi|290508767|ref|ZP_06548138.1| cystine transport system permease [Klebsiella sp. 1_1_55] gi|206570009|gb|ACI11785.1| amino acid ABC transporter, permease protein [Klebsiella pneumoniae 342] gi|289778161|gb|EFD86158.1| cystine transport system permease [Klebsiella sp. 1_1_55] Length = 222 Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 62/207 (29%), Positives = 109/207 (52%), Gaps = 18/207 (8%) Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251 F VLG +L+L R+S + K L +YIS F G P LIA + +++ P Sbjct: 32 FGLVLGFILALM--RMSPLWPVKW---LARMYISIFR--GTP---LIAQLFMIYYGLP-- 79 Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311 QF G + P + I LS TAA+ AE +R+ + ++ +GQ EAA ++G+T + Sbjct: 80 -QF----GIELDP-IPAAMIGLSLNTAAYAAETLRAAIASIDKGQWEAAASIGMTPWQTM 133 Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371 R +LPQA R +PPL++ +++L+K++SLA + +L I ++T + + L Sbjct: 134 RRAILPQAARVALPPLSNSFISLVKDTSLAATIQVPELFRQAQLITSRTLEVFTMYLAAS 193 Query: 372 FIYLSLSIMIALFMNRLNAKIALKEKK 398 IY ++ +++ N ++ +E+ Sbjct: 194 LIYWVMATVLSSLQNYFENQLNRQERD 220 Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust. Identities = 28/97 (28%), Positives = 47/97 (48%), Gaps = 8/97 (8%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G V T L+ GM ++G ++ R+S V W+ R+Y+ +FR P + +F + Sbjct: 15 LLKGAVFTLQLSIGGMFFGLVLGFILALMRMSPLWPVKWLARMYISIFRGTPLIAQLFMI 74 Query: 149 YKSV----LSVLPIPDHSIVLPFGMFLNNRGLSFPTL 181 Y + + + PIP I G+ LN + TL Sbjct: 75 YYGLPQFGIELDPIPAAMI----GLSLNTAAYAAETL 107 >gi|229528071|ref|ZP_04417462.1| amino acid ABC transporter permease protein [Vibrio cholerae 12129(1)] gi|229334433|gb|EEN99918.1| amino acid ABC transporter permease protein [Vibrio cholerae 12129(1)] Length = 266 Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 53/158 (33%), Positives = 85/158 (53%), Gaps = 14/158 (8%) Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268 R H G+AL YI+ ++ P LV I L Y + PV+G F + Sbjct: 90 RQSHSLVGRALGTGYIA--VVRNTPLLVQIYLLYFVF--GPVIGL----------DRFAT 135 Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328 +AL+ + A+ AE+ R GL ++ +GQ EAA +LGL+ V+LPQ ++ +PPLT Sbjct: 136 AVLALALFQGAYTAEVFRGGLNSIAQGQYEAARSLGLSRFFTFYDVILPQLLQRTLPPLT 195 Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 ++ ++L+KNSS+ + DL + G I+++T EI Sbjct: 196 NEMVSLIKNSSIVSVMAIFDLTTQGRNIVSETAMPFEI 233 >gi|315929979|gb|EFV09130.1| amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Campylobacter jejuni subsp. jejuni 305] Length = 247 Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 38/94 (40%), Positives = 69/94 (73%), Gaps = 5/94 (5%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +AL ++A+IAEIVRSG+ +V +GQMEAA A+GL ++ + + ++LPQA ++I+P L ++ Sbjct: 123 LALGLNSSAYIAEIVRSGINSVDKGQMEAARAMGLDYKTSMKEIILPQATKNILPALANE 182 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364 +++L K +S+ VGF ++ + T+ +Q+ QA+ Sbjct: 183 FISLFKETSV---VGFISVIDI--TMQSQSLQAV 211 >gi|262164524|ref|ZP_06032262.1| amino acid ABC transporter permease protein [Vibrio mimicus VM223] gi|262026904|gb|EEY45571.1| amino acid ABC transporter permease protein [Vibrio mimicus VM223] Length = 265 Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 52/159 (32%), Positives = 84/159 (52%), Gaps = 16/159 (10%) Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVS-PEFM 267 R G+AL YI+ ++ P LV I L Y F+ G + F Sbjct: 89 RQSRSLVGRALGTGYIA--VVRNTPLLVQIYLLY-------------FVFGPVIGLDRFA 133 Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327 + +AL+ + A+ AE+ R GL ++P+GQ EAA +LGL+ V+LPQ ++ +PPL Sbjct: 134 TAVLALALFQGAYTAEVFRGGLNSIPQGQYEAARSLGLSRFFTFYDVILPQLLQRTLPPL 193 Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 T++ ++L+KNSS+ + DL + G I+++T EI Sbjct: 194 TNEMVSLIKNSSIVSVMAIFDLTTQGRNIVSETAMPFEI 232 >gi|229590087|ref|YP_002872206.1| putative ABC-type amino-acid transporter permease [Pseudomonas fluorescens SBW25] gi|229361953|emb|CAY48853.1| putative ABC-type amino-acid transporter permease protein [Pseudomonas fluorescens SBW25] Length = 220 Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 43/129 (33%), Positives = 74/129 (57%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + + L+ + + ++EIVR L A+PRGQ+EA A+GLT ++ VLLPQA+R I+P Sbjct: 91 FQAGAVGLTLFCGSHVSEIVRGALQAIPRGQLEAGKAIGLTFYQSLGYVLLPQALRQILP 150 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 + ++K S+L +G A+L+ +I +T +E L F++ ++ I LF Sbjct: 151 TWVNSSTEIVKASTLLSVIGVAELLLSTQQVIARTFMTLEFYLFAGFLFFVINYAIELFG 210 Query: 386 NRLNAKIAL 394 + ++AL Sbjct: 211 RYIEKRVAL 219 >gi|326803926|ref|YP_004321744.1| putative glutamine ABC transporter, permease protein GlnP [Aerococcus urinae ACS-120-V-Col10a] gi|326651679|gb|AEA01862.1| putative glutamine ABC transporter, permease protein GlnP [Aerococcus urinae ACS-120-V-Col10a] Length = 215 Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 42/125 (33%), Positives = 71/125 (56%), Gaps = 1/125 (0%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + A++ + + I+EI+R G+ AVP+GQMEA ++ G T + L++LPQA+RS++P Sbjct: 88 FWAAVAAMTIFESCMISEIIRGGMNAVPKGQMEAGLSTGFTRGQVIILIILPQAIRSMLP 147 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ-TGQAIEIILIWMFIYLSLSIMIALF 384 + SQ + L+K++SLA + +L I Q T I I + F+Y +++ Sbjct: 148 SIVSQLIALIKDTSLATVISLPELTHNARIIYGQETSYVIPIFVAMTFLYWITCFLLSRL 207 Query: 385 MNRLN 389 RL Sbjct: 208 AKRLK 212 >gi|260577144|ref|ZP_05845121.1| polar amino acid ABC transporter, inner membrane subunit [Rhodobacter sp. SW2] gi|259020618|gb|EEW23937.1| polar amino acid ABC transporter, inner membrane subunit [Rhodobacter sp. SW2] Length = 434 Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 36/78 (46%), Positives = 56/78 (71%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I ++ + AA++AE+VR G+ A+PRGQ EAA ALGL + A RL++LPQA++ IP + S Sbjct: 304 ILVTIFAAAYLAEVVRGGMAALPRGQYEAADALGLDYWSAERLIILPQALKISIPSIVST 363 Query: 331 YLNLLKNSSLAVAVGFAD 348 +++L K+++L VG D Sbjct: 364 FISLFKDTTLVSFVGLLD 381 >gi|317053433|ref|YP_004119200.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea sp. At-9b] gi|316953172|gb|ADU72644.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea sp. At-9b] Length = 230 Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 59/197 (29%), Positives = 100/197 (50%), Gaps = 26/197 (13%) Query: 216 GKALPLLYISTFLIFGLPTLVLIALKY--------------QLHFDKPVLGQFNFIGGST 261 G AL ++ +S F P LV++A Y +F P L Q+ + GS+ Sbjct: 40 GTALAIMRLSRF-----PLLVMLASSYVNLMRSLPLVLVIFWFYFLVPYLLQW--LTGSS 92 Query: 262 ----VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317 V P F S I + + A + EIVRSG+ ++PRGQ AA+ALGLT ++ V+LP Sbjct: 93 FPVRVDP-FWSSVITFTLFEACYFCEIVRSGIQSLPRGQSSAALALGLTPAQSLLYVILP 151 Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377 QAMR+++P +Q + L +++SL + D + + + G+ +E+ L +Y + Sbjct: 152 QAMRNMLPLFLTQTIILFQDTSLVYVLSITDFLGAAAKVAQRDGRLLEMYLFAAAVYFLI 211 Query: 378 SIMIALFMNRLNAKIAL 394 S + + L +I++ Sbjct: 212 SYGASCGVRYLQKRISI 228 >gi|153216003|ref|ZP_01950225.1| amino acid ABC transporter, permease protein [Vibrio cholerae 1587] gi|124114516|gb|EAY33336.1| amino acid ABC transporter, permease protein [Vibrio cholerae 1587] Length = 265 Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 53/158 (33%), Positives = 85/158 (53%), Gaps = 14/158 (8%) Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268 R H G+AL YI+ ++ P LV I L Y + PV+G F + Sbjct: 89 RQSHSLVGRALGTGYIA--VVRNTPLLVQIYLLYFVF--GPVIGL----------DRFAT 134 Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328 +AL+ + A+ AE+ R GL ++ +GQ EAA +LGL+ V+LPQ ++ +PPLT Sbjct: 135 AVLALALFQGAYTAEVFRGGLNSIAQGQYEAARSLGLSRFFTFYDVILPQLLQRTLPPLT 194 Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 ++ ++L+KNSS+ + DL + G I+++T EI Sbjct: 195 NEMVSLIKNSSIVSVMAIFDLTTQGRNIVSETAMPFEI 232 >gi|110633468|ref|YP_673676.1| polar amino acid ABC transporter, inner membrane subunit [Mesorhizobium sp. BNC1] gi|110284452|gb|ABG62511.1| general L-amino acid ABC transporter membrane protein [Chelativorans sp. BNC1] Length = 498 Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 34/87 (39%), Positives = 61/87 (70%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 + + I ++ ++AA++AE++R GL A+P+GQ E A ALGL + + RLV++PQA++ +I Sbjct: 360 QLLRALIGVAIFSAAYMAEVIRGGLQAIPKGQYEGAEALGLGYWQMMRLVIMPQAIKLVI 419 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVS 351 P + + ++ L K++SL +G ADL+ Sbjct: 420 PGIVNTFIGLFKDTSLVYIIGLADLLG 446 >gi|327486002|gb|AEA80408.1| Amino acid ABC transporter, permease protein [Vibrio cholerae LMA3894-4] Length = 265 Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 53/158 (33%), Positives = 85/158 (53%), Gaps = 14/158 (8%) Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268 R H G+AL YI+ ++ P LV I L Y + PV+G F + Sbjct: 89 RQSHSLVGRALGTGYIA--VVRNTPLLVQIYLLYFVF--GPVIGL----------DRFAT 134 Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328 +AL+ + A+ AE+ R GL ++ +GQ EAA +LGL+ V+LPQ ++ +PPLT Sbjct: 135 AVLALALFQGAYTAEVFRGGLNSIAQGQYEAARSLGLSRFFTFYDVILPQLLQRTLPPLT 194 Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 ++ ++L+KNSS+ + DL + G I+++T EI Sbjct: 195 NEMVSLIKNSSIVSVMAIFDLTTQGRNIVSETAMPFEI 232 >gi|323165731|gb|EFZ51517.1| glutamine transport system permease protein glnP [Shigella sonnei 53G] Length = 219 Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 58/198 (29%), Positives = 108/198 (54%), Gaps = 12/198 (6%) Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256 G+V+ L A +R F + L++I +I G P +V + Y F P+ FN Sbjct: 33 GLVIGLLAG-FARTFGGWIANHVALVFIE--VIRGTPIVVQVMFIY---FALPM--AFND 84 Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316 + + P F + + + + A+IAEI R ++++ +G EA +ALGL+ + R V+L Sbjct: 85 L---RIDP-FTAAVVTIMINSGAYIAEITRGTVLSIHKGFREAGLALGLSRWETIRYVIL 140 Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376 P A+R ++PPL +Q++ +K++SL + +G A+L G II +A+EI YL Sbjct: 141 PLALRRMLPPLGNQWIISIKDTSLFIVIGVAELTRQGQEIIAGNFRALEIWSAVAVFYLI 200 Query: 377 LSIMIALFMNRLNAKIAL 394 ++++++ + RL ++ + Sbjct: 201 ITLVLSFILRRLERRMKI 218 >gi|308187411|ref|YP_003931542.1| ABC transport system, permease protein [Pantoea vagans C9-1] gi|308057921|gb|ADO10093.1| putative ABC transport system, permease protein [Pantoea vagans C9-1] Length = 307 Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 68/234 (29%), Positives = 121/234 (51%), Gaps = 28/234 (11%) Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL----YISTFLIFGLPTLV 236 +T+ A V F G VL+L RLS + P+L + T+ G+P LV Sbjct: 65 MTLQLTAISVVLGFAFGTVLALM--RLSSN---------PVLVAVSWAYTWFFRGVPMLV 113 Query: 237 LIALKY-------QLHFDKPVLGQ-FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288 + L Y ++ P LG+ ++ + VSP F + IAL + +A+ AEIVR+G Sbjct: 114 QLFLWYNIAALYPRIALSIPGLGELWSAQSNALVSP-FSAAVIALVMHQSAYAAEIVRAG 172 Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348 + +V GQ+EAA ALG + R +LPQAMR+I+PP ++ + LK +++ + D Sbjct: 173 IQSVGNGQIEAARALGYRPAQIFRHTVLPQAMRAIMPPAGNEIIGQLKTTAVVSVISLQD 232 Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL---FMNRLNAK-IALKEKK 398 ++ I +T + I ++L+ YL ++ ++++ ++ R + + +EK+ Sbjct: 233 VLFSAQIIYQRTYEVIPLLLVATLWYLLMTSVLSVGQYYVERYFGRGVTRREKR 286 >gi|319761573|ref|YP_004125510.1| polar amino acid abc transporter, inner membrane subunit [Alicycliphilus denitrificans BC] gi|330823441|ref|YP_004386744.1| polar amino acid ABC transporter inner membrane subunit [Alicycliphilus denitrificans K601] gi|317116134|gb|ADU98622.1| polar amino acid ABC transporter, inner membrane subunit [Alicycliphilus denitrificans BC] gi|329308813|gb|AEB83228.1| polar amino acid ABC transporter, inner membrane subunit [Alicycliphilus denitrificans K601] Length = 218 Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 61/223 (27%), Positives = 111/223 (49%), Gaps = 38/223 (17%) Query: 188 KIFVFSFVL----GIVLSLFATRLSRHFHEKTG---------KALPLLYISTFLIFGLPT 234 K+FV + L G+VL+L RLSR + +G + PL+ F+ F LP Sbjct: 21 KLFVITLALAVPLGLVLAL--ARLSR-WKALSGAVNGYIWLMRGTPLMLQMLFIYFALPF 77 Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294 + ++ ++ P+F + A + AA+ AEI R+G+ +V R Sbjct: 78 VPVVGVRL---------------------PDFPAAVTAFALNYAAYFAEIFRAGIQSVDR 116 Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354 GQ EAA LG+++ + R ++LPQ +RSI+PP++++ + L+K++SL + DL+ Sbjct: 117 GQYEAAKVLGMSYGQTMRRIVLPQMVRSILPPMSNETITLVKDTSLIYVLALNDLLRAAR 176 Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 I+ + I+ F YL +++++ RL + A ++ Sbjct: 177 GIVQRDFTTTPFIVAAAF-YLLMTLVLTWGFQRLEQRYAKYDQ 218 >gi|15890699|ref|NP_356371.1| ABC transporter, membrane spanning protein (amino acid) [Agrobacterium tumefaciens str. C58] gi|15158968|gb|AAK89156.1| ABC transporter, membrane spanning protein (amino acid) [Agrobacterium tumefaciens str. C58] Length = 252 Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 42/134 (31%), Positives = 75/134 (55%), Gaps = 1/134 (0%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P F + L Y AF++E+VR+G++A+ GQM+AA ALG ++ A R ++LPQA+ ++ Sbjct: 97 PSFAIMLATLVVYQGAFLSEVVRAGIVALGVGQMDAAKALGHSYGSAMRFIILPQALYNM 156 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ-TGQAIEIILIWMFIYLSLSIMIA 382 IP + S ++ +K+++L + DL + NQ Q ++ LI +Y +L + Sbjct: 157 IPSMISTFVATIKDTTLGYVINVPDLTFAASQVNNQLLTQPFQVFLILAVVYYALCWSLT 216 Query: 383 LFMNRLNAKIALKE 396 N + +IA + Sbjct: 217 YLANAVERRIARRR 230 >gi|229522563|ref|ZP_04411979.1| amino acid ABC transporter permease protein [Vibrio cholerae TM 11079-80] gi|229340548|gb|EEO05554.1| amino acid ABC transporter permease protein [Vibrio cholerae TM 11079-80] Length = 266 Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 53/158 (33%), Positives = 85/158 (53%), Gaps = 14/158 (8%) Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268 R H G+AL YI+ ++ P LV I L Y + PV+G F + Sbjct: 90 RQSHSLVGRALGTGYIA--VVRNTPLLVQIYLLYFVF--GPVIGL----------DRFAT 135 Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328 +AL+ + A+ AE+ R GL ++ +GQ EAA +LGL+ V+LPQ ++ +PPLT Sbjct: 136 AVLALTLFQGAYTAEVFRGGLNSIAQGQYEAAHSLGLSRFFTFYDVILPQLLQRTLPPLT 195 Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 ++ ++L+KNSS+ + DL + G I+++T EI Sbjct: 196 NEMVSLIKNSSIVSVMAIFDLTTQGRNIVSETAMPFEI 233 >gi|218517086|ref|ZP_03513926.1| probable amino acid ABC transporter, permease protein [Rhizobium etli 8C-3] Length = 170 Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 50/178 (28%), Positives = 91/178 (51%), Gaps = 24/178 (13%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 + LP+L + F F LP + L DK S + LS Y Sbjct: 15 RNLPILVLVLFAFFALP-------QMGLRLDK-----------------MKSFVLVLSLY 50 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 + A++AE+ R+GL+++PRG EA +A+GLT + ++ P +R+++P L+S ++L K Sbjct: 51 SGAYLAEVFRAGLLSIPRGLTEAGLAIGLTGMQIRSSIIAPLMLRNVLPSLSSTIISLFK 110 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394 ++SLA A+ +L I ++ + IE ++ +Y++ +IA M + ++AL Sbjct: 111 DTSLAAAIAVPELTFAARKINVESFRVIETWMVTSALYVATCFLIAALMRLVERRLAL 168 >gi|300716303|ref|YP_003741106.1| ABC polar amino acid family transporter, inner membrane subunit [Erwinia billingiae Eb661] gi|299062139|emb|CAX59255.1| ABC polar amino acid family transporter, inner membrane subunit [Erwinia billingiae Eb661] Length = 305 Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 63/213 (29%), Positives = 112/213 (52%), Gaps = 24/213 (11%) Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL--YISTFLIF--GLPTLVLIALKYQL 244 I + + VLG+V+++ RLS + PLL + ++ F G P LV + Y L Sbjct: 96 IMLLAIVLGVVIAVM--RLSTN---------PLLSGFSGGWIWFFRGTPVLVQLIFWYNL 144 Query: 245 HFDKPVL-----GQFNFIGGST---VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296 P + G F+ GS ++P + + + L +A++AEI+R+G+ +V GQ Sbjct: 145 AALYPTVNIGIPGVFSLWQGSMNDLITP-WTAAILGLGLNESAYMAEIIRAGISSVDDGQ 203 Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356 EAA ALG+T + + V+LPQA+ IIPP +Q + +LK +SL + +DL+ I Sbjct: 204 QEAARALGMTKNQYLKRVILPQAVPFIIPPTGNQIIGMLKTTSLVSVISLSDLLYSAQAI 263 Query: 357 INQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 ++T + I ++++ YL + +++ R+ Sbjct: 264 YSRTYENIPLLIVACIWYLVATTLLSAAQTRIE 296 Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust. Identities = 22/66 (33%), Positives = 34/66 (51%) Query: 85 YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144 ++ IL G V T WL M+ A ++G ++ RLS N L++ ++ FR P LV Sbjct: 78 FSPTILSGLVTTSWLTLVIMLLAIVLGVVIAVMRLSTNPLLSGFSGGWIWFFRGTPVLVQ 137 Query: 145 IFFLYK 150 + F Y Sbjct: 138 LIFWYN 143 >gi|171318277|ref|ZP_02907438.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria MEX-5] gi|171096541|gb|EDT41437.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria MEX-5] Length = 248 Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 48/147 (32%), Positives = 82/147 (55%), Gaps = 4/147 (2%) Query: 251 LGQFNFIGGSTVSPEFMSLYI----ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306 LGQF I S + P Y+ +L+ TA + AEI+R GL+AVP GQ+EA ++GL+ Sbjct: 78 LGQFGVIRESFIWPLLREPYVCAVLSLALCTAGYTAEILRGGLMAVPVGQIEAGYSIGLS 137 Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 R V+ P A+R +P +++ + L+K+++LA V ++ V II QT + E+ Sbjct: 138 GFALLRSVIGPIALRQCLPAYSTEAVLLVKSTALASLVTVWEVTGVAQQIIQQTYRTTEV 197 Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIA 393 + IYL L+ ++ + L +++ Sbjct: 198 FVCAALIYLGLNFIVVRLLGALEWRLS 224 >gi|170743938|ref|YP_001772593.1| polar amino acid ABC transporter inner membrane subunit [Methylobacterium sp. 4-46] gi|168198212|gb|ACA20159.1| polar amino acid ABC transporter, inner membrane subunit [Methylobacterium sp. 4-46] Length = 385 Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 36/95 (37%), Positives = 62/95 (65%) Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315 F+ G + I ++ ++AA++AE+VR GL A+P+GQ E A +LGL++ + RLV+ Sbjct: 238 FLPGDITVDRLLRPLIGVALFSAAYMAEVVRGGLQAIPKGQTEGANSLGLSYWQGMRLVI 297 Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 LPQA+R +IP + + ++ L K+++L VG D + Sbjct: 298 LPQALRIVIPGIVNSFIALFKDTTLVSIVGIFDFI 332 >gi|300172546|ref|YP_003771711.1| glutamine ABC transporter permease [Leuconostoc gasicomitatum LMG 18811] gi|299886924|emb|CBL90892.1| glutamine ABC transporter, permease protein [Leuconostoc gasicomitatum LMG 18811] Length = 219 Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 56/178 (31%), Positives = 92/178 (51%), Gaps = 25/178 (14%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 + LPLL I F+ F LP K +H P F + IA+S + Sbjct: 66 RNLPLLLIIFFVYFALP-------KIGIHL-----------------PIFWATVIAMSTF 101 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 +A +AEIVR GL +V GQ E A A GL++ + ++LPQA + +IPP+ SQ ++L+K Sbjct: 102 ESAMLAEIVRGGLESVDNGQFEGARANGLSNMQTMIYIVLPQAYKKMIPPIISQLISLVK 161 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM-FIYLSLSIMIALFMNRLNAKIA 393 ++SLA+ + +++ G + Q I +LI + +Y L+ ++L + K+A Sbjct: 162 DTSLALGIVLSEMTYRGQIVYAQNSTYIVPVLIAITLVYFLLNYGLSLLAKWADHKLA 219 >gi|291454549|ref|ZP_06593939.1| glutamate transporter permease [Streptomyces albus J1074] gi|291357498|gb|EFE84400.1| glutamate transporter permease [Streptomyces albus J1074] Length = 221 Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 42/93 (45%), Positives = 58/93 (62%), Gaps = 1/93 (1%) Query: 257 IGGSTVSP-EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315 +GG V F + LS YTAAF+ E VRSG+ VP GQ EAA ALGL + L++ Sbjct: 81 LGGEGVKEVAFRMAVLGLSTYTAAFVCESVRSGINTVPVGQAEAARALGLNFTQVLTLIV 140 Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348 LPQA R++I PL + + L KN+++A A+G + Sbjct: 141 LPQAFRTVIGPLANVLIALTKNTTVAAAIGVGE 173 >gi|253690355|ref|YP_003019545.1| polar amino acid ABC transporter, inner membrane subunit [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251756933|gb|ACT15009.1| polar amino acid ABC transporter, inner membrane subunit [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 227 Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 65/221 (29%), Positives = 118/221 (53%), Gaps = 21/221 (9%) Query: 178 FPTLTMDTNAKIFV------FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231 FP + M +F+ F+ VLG++L+L R + LYIS F G Sbjct: 16 FPQVLMYLPTTLFLAVVSMFFAMVLGLILALV-----RESKIVVVVKIVELYISLFR--G 68 Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291 +P+LV + + ++F P L F G S + ++ I S T+A++AEI R+GL + Sbjct: 69 IPSLVQL---FIIYFGLPQL----FPGLSNLDAMTAAI-IGFSLKTSAYMAEIFRAGLSS 120 Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 V GQ EA +++G++ + R ++LPQAM + +P + +++L+K++S+A A+G ++L + Sbjct: 121 VDFGQTEAGLSIGMSKAQVYRRIVLPQAMLNALPATGNTFISLIKDTSVAFALGVSELFA 180 Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 G I ++ + E L+ IY + I+ + +L K+ Sbjct: 181 EGKMIAAESLRFFETFLVVGLIYWLVIIVYSWLQKQLEKKL 221 >gi|170695848|ref|ZP_02886989.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia graminis C4D1M] gi|170139272|gb|EDT07459.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia graminis C4D1M] Length = 251 Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 48/147 (32%), Positives = 84/147 (57%), Gaps = 4/147 (2%) Query: 251 LGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306 +GQF I S + P +M ++L+ TA + AEI+R GL+AVP GQ+EA ++GL+ Sbjct: 78 MGQFGVIRESFLWPVLREPYMCAVLSLALCTAGYTAEIIRGGLMAVPVGQIEAGYSIGLS 137 Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 R V+ P A+R +P +++ + L+K+++LA V ++ V II QT + E+ Sbjct: 138 GFALLRRVIGPIALRQCLPAYSTEAVLLVKSTALASLVTVWEVTGVAQQIIQQTYRTTEV 197 Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIA 393 + IYL L+ +I ++ L +++ Sbjct: 198 FICAALIYLFLNFVIVRALSMLETRLS 224 >gi|89899054|ref|YP_521525.1| amino acid ABC transporter permease [Rhodoferax ferrireducens T118] gi|89343791|gb|ABD67994.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Rhodoferax ferrireducens T118] Length = 222 Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 56/177 (31%), Positives = 93/177 (52%), Gaps = 29/177 (16%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 +A PLL FL FGLP+ + PE + IALS Sbjct: 65 RATPLLAQLYFLYFGLPSF------------------------GVIMPETVIGIIALSIN 100 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 + A+++EI+RSG++++P GQ+EA+ + G+ + + RL++LPQA+R ++ PL Q + L+K Sbjct: 101 SGAYVSEIIRSGIMSIPHGQVEASASSGMNYWQQMRLIILPQALRPMVSPLIGQAIVLVK 160 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILI----WMFIYLSLSIMIALFMNRLN 389 +SSL + +L G T+ N +E + ++ IY L +M A +M R+N Sbjct: 161 DSSLLSLISVLELTRAGQTLANDRFMPVEGLATTAVGYLIIYFGLKLMAAAWM-RIN 216 >gi|121604975|ref|YP_982304.1| polar amino acid ABC transporter inner membrane subunit [Polaromonas naphthalenivorans CJ2] gi|120593944|gb|ABM37383.1| amino acid ABC transporter membrane protein 1, PAAT family [Polaromonas naphthalenivorans CJ2] Length = 227 Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 70/212 (33%), Positives = 110/212 (51%), Gaps = 27/212 (12%) Query: 177 SFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF---LIFGLP 233 ++ TL + +A VF F+LG+ +L KTG ++ L +++ LI P Sbjct: 21 AWTTLALSLSAT--VFGFLLGVFCAL----------TKTGHSVWLARVASAYVELIRNTP 68 Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293 LV I + Y F LG +G F + IAL A+ +EIVR+G+ ++P Sbjct: 69 LLVQIFIVY---FGLSSLGLQ--VGA------FTAATIALVVNVGAYTSEIVRAGIDSIP 117 Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353 RGQMEAA + L+ + R V+LP A+ + P LTSQY+ L+ SS+ + +L +V Sbjct: 118 RGQMEAAECMALSRWQTLRHVVLPPAIERVYPALTSQYVLLMLASSICSQISAEELTAVA 177 Query: 354 GTIINQTGQAIEIILIWMFIYLSLS-IMIALF 384 I + T +++E LI YL +S +M A+F Sbjct: 178 NRIQSDTFRSVETYLIVAGAYLLMSLVMRAIF 209 >gi|322387247|ref|ZP_08060857.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus infantis ATCC 700779] gi|321141776|gb|EFX37271.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus infantis ATCC 700779] Length = 543 Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 39/123 (31%), Positives = 71/123 (57%) Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 +S T A++ EIVR G++AV +GQ EAA ALG+TH + R ++LPQ +R+I+P ++++ Sbjct: 406 VSINTGAYMTEIVRGGILAVDKGQFEAATALGMTHNQTMRKIVLPQVVRNILPATGNEFV 465 Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 +K++S+ + +L G T+ QT Q + I IY L+ + + + ++ Sbjct: 466 INIKDTSVLNVISVVELYFSGNTVATQTYQYFQTFTIIAVIYFVLTFTVTRILRYIEKRM 525 Query: 393 ALK 395 + Sbjct: 526 DMD 528 >gi|153801933|ref|ZP_01956519.1| amino acid ABC transporter, permease protein [Vibrio cholerae MZO-3] gi|124122508|gb|EAY41251.1| amino acid ABC transporter, permease protein [Vibrio cholerae MZO-3] Length = 266 Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 53/158 (33%), Positives = 85/158 (53%), Gaps = 14/158 (8%) Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268 R H G+AL YI+ ++ P LV I L Y + PV+G F + Sbjct: 90 RQSHSLVGRALGTGYIA--VVRNTPLLVQIYLLYFVF--GPVIGL----------DRFAT 135 Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328 +AL+ + A+ AE+ R GL ++ +GQ EAA +LGL+ V+LPQ ++ +PPLT Sbjct: 136 AVLALALFQGAYTAEVFRGGLNSIAQGQYEAARSLGLSRFFTFYDVILPQLLQRTLPPLT 195 Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 ++ ++L+KNSS+ + DL + G I+++T EI Sbjct: 196 NEMVSLIKNSSIVSVMAIFDLTTQGRNIVSETAMPFEI 233 >gi|319440318|ref|ZP_07989474.1| putative ABC transport system, permease protein [Corynebacterium variabile DSM 44702] Length = 323 Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 37/82 (45%), Positives = 58/82 (70%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+ ++ L +A++AEIVR+G+ +VP GQ EA+ ALG+T + R +LPQAMR IIP Sbjct: 150 FVLAFVGLGLNESAYMAEIVRAGVQSVPEGQTEASKALGMTWWQTMRRTVLPQAMRIIIP 209 Query: 326 PLTSQYLNLLKNSSLAVAVGFA 347 P ++ +++LK +SL +AV +A Sbjct: 210 PTGNELISMLKTTSLVIAVPYA 231 >gi|218681463|ref|ZP_03529350.1| arginine transporter permease subunit ArtQ [Rhizobium etli CIAT 894] Length = 223 Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 62/175 (35%), Positives = 96/175 (54%), Gaps = 12/175 (6%) Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIA-LSCYTAAFI 281 Y+S LI GLP L++I + + + VL + GS V + MS IA LS AA++ Sbjct: 55 YVS--LIRGLPELLVI---FLIFYGGTVL--LTNLTGSYVEVDAMSAGIAALSVVAAAYL 107 Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341 EI+R L++V GQ EAA+ALG +A RLV+LPQ M +P L +Q+L +LK S+L Sbjct: 108 TEILRGALLSVSAGQWEAALALGFRRPRAFRLVILPQMMARALPGLGNQWLVILKESALV 167 Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL----SIMIALFMNRLNAKI 392 VG +L+ T Q + L +Y+S+ S+++ + +RL + + Sbjct: 168 SVVGLEELMRKSVVAAGATHQPLAFYLTAAGLYVSITGVSSLLLKAYESRLTSHL 222 >gi|163858764|ref|YP_001633062.1| amino acids ABC transporter, permease protein [Bordetella petrii DSM 12804] gi|163262492|emb|CAP44795.1| amino acids ABC transporter, permease protein [Bordetella petrii] Length = 230 Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 59/186 (31%), Positives = 102/186 (54%), Gaps = 30/186 (16%) Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRH--FHEKTGKALPLLY 223 P G + GL+ +L + +F +G++L+L R+S H F+ + Sbjct: 21 PMGGLVATVGLALVSLAL---------AFPIGVLLAL--GRISSHKIFYWPATAVV---- 65 Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283 +++ GLP ++ I Y F P+L G+TVS +++ AL Y A+++E Sbjct: 66 ---YVVRGLPLIMFIFWAY---FFLPLLI------GNTVS-GVVTMAAALIIYEGAYLSE 112 Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343 I+RSG+ A+P GQMEA +LGL+H +A R ++LPQA+ + IP + SQ+++ +K +SL Sbjct: 113 IIRSGIQALPAGQMEAGRSLGLSHMQAMRKIVLPQALYNTIPSMLSQFISTVKETSLGFV 172 Query: 344 VGFADL 349 + +L Sbjct: 173 ISVHEL 178 >gi|317403731|gb|EFV84216.1| amino acid ABC transporter [Achromobacter xylosoxidans C54] Length = 229 Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 37/84 (44%), Positives = 57/84 (67%) Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329 +++LS YT+ ++AEIV + AVPRGQ E A+ LGL + RLV+LPQAMR I+ P++ Sbjct: 96 FVSLSVYTSCYVAEIVSGAIRAVPRGQTEGAMTLGLRPLQILRLVILPQAMRLIVQPMSG 155 Query: 330 QYLNLLKNSSLAVAVGFADLVSVG 353 Y+ L+K++++ VG +L G Sbjct: 156 VYVMLIKSTAILSVVGITELTRQG 179 >gi|330429986|gb|AEC21320.1| glutamate/aspartate transport system permease protein [Pusillimonas sp. T7-7] Length = 229 Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 51/178 (28%), Positives = 93/178 (52%), Gaps = 5/178 (2%) Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGST---VSPEFMSLYIALSCY 276 PL +++ + L L LI + + +F P +G ++ GS+ F S + + + Sbjct: 52 PLSWVAGTYVNLLRALPLILVIFWFYFLVPYIG--AWLTGSSRPVAVGGFTSALVTFTLF 109 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 AA+ EI+R+G+ +VPRGQ A ALGLT+ + V+LPQA R++ P L +Q + L + Sbjct: 110 EAAYFCEIMRAGIQSVPRGQHSAGYALGLTYWQVMGKVVLPQAFRNMTPILLTQTIVLFQ 169 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394 ++SL + D + + + G+ IE+ + IY +S +L + L + ++ Sbjct: 170 DTSLVYVLSLTDFLGAAVKVAQRDGRLIEMYMFVALIYFIMSYAASLLVRYLRQRTSI 227 >gi|312961372|ref|ZP_07775877.1| glutamine/glutamate ABC transporter, permease protein [Pseudomonas fluorescens WH6] gi|311285030|gb|EFQ63606.1| glutamine/glutamate ABC transporter, permease protein [Pseudomonas fluorescens WH6] Length = 220 Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 43/129 (33%), Positives = 74/129 (57%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + + L+ + + ++EIVR L A+PRGQ+EA A+GLT ++ VLLPQA+R I+P Sbjct: 91 FQAGAVGLTLFCGSHVSEIVRGALQAIPRGQLEAGKAIGLTFPQSLAYVLLPQALRQILP 150 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 + ++K S+L +G A+L+ +I +T +E L F++ ++ I LF Sbjct: 151 TWVNSSTEIVKASTLLSVIGVAELLLSTQQVIARTFMTLEFYLFAGFMFFVINYAIELFG 210 Query: 386 NRLNAKIAL 394 + ++AL Sbjct: 211 RYIEKRVAL 219 >gi|213967000|ref|ZP_03395150.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tomato T1] gi|301385184|ref|ZP_07233602.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tomato Max13] gi|302062752|ref|ZP_07254293.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tomato K40] gi|302130125|ref|ZP_07256115.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213928322|gb|EEB61867.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tomato T1] gi|331014303|gb|EGH94359.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 220 Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 44/129 (34%), Positives = 72/129 (55%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + I L+ + + ++EIVR L A+PRGQ+EA A+GL + R VLLPQAMR I+P Sbjct: 91 FQAGAIGLTLFCGSHVSEIVRGALQAIPRGQIEAGKAIGLRFNQTLRYVLLPQAMRQILP 150 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 + ++K S+L +G A+L+ +I +T +E L F++ ++ I L Sbjct: 151 TWVNSSTEIVKASTLLSVIGVAELLLSTQQVIARTFMTLEFYLFAGFLFFLINYAIELLG 210 Query: 386 NRLNAKIAL 394 + ++AL Sbjct: 211 RHIEKRVAL 219 >gi|113460357|ref|YP_718418.1| amino acid ABC transporter permease [Haemophilus somnus 129PT] gi|112822400|gb|ABI24489.1| amino acid ABC transporter membrane protein, PAAT family [Haemophilus somnus 129PT] Length = 238 Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 55/204 (26%), Positives = 102/204 (50%), Gaps = 13/204 (6%) Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249 F+ V+ I ++L S + + +YIS +I G P LV I++ + + P Sbjct: 43 FILGMVIAIAVALIRVSPSHSIIHRLFLFITKIYIS--IIRGTPMLVQISIVF---YGLP 97 Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309 LG F + P + I S A+ +E VR+ + +VP+GQ EA +G+T+ + Sbjct: 98 ALGIF-------IDP-IPAAIIGFSLNVGAYASETVRAAIQSVPKGQWEAGYTIGMTYMQ 149 Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369 R +++PQA R +PPL++ +++L K++SLA V ++ V + N + + + + Sbjct: 150 TFRRIIVPQAFRVAVPPLSNTFISLFKDTSLASVVTVTEMFRVAQQVANMSYDFLPVYIE 209 Query: 370 WMFIYLSLSIMIALFMNRLNAKIA 393 IY ++ L+ R+ K+A Sbjct: 210 AALIYWCFCFILFLWQARIEKKLA 233 >gi|161521798|ref|YP_001585225.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia multivorans ATCC 17616] gi|189352040|ref|YP_001947667.1| polar amino acid transport system permease protein [Burkholderia multivorans ATCC 17616] gi|160345848|gb|ABX18933.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia multivorans ATCC 17616] gi|189336062|dbj|BAG45131.1| polar amino acid transport system permease protein [Burkholderia multivorans ATCC 17616] Length = 221 Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 69/238 (28%), Positives = 113/238 (47%), Gaps = 25/238 (10%) Query: 160 DHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKAL 219 D S+V P+ L +GL LT+ A + +LG VLSL SR Sbjct: 4 DFSVVWPYWWVLV-KGLG---LTLAYTATCAIVGSLLGFVLSLLRMSPSRWLRGPVAA-- 57 Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279 Y+ F G P L+ + + + F PV+ + P ++S+ I+L+ Y AA Sbjct: 58 ---YVEFFR--GTPLLIQL---FWVFFCFPVVLRLPI-------PPYLSVLISLTLYMAA 102 Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339 +E R L ++ Q +A IAL L+ V+ PQA+ IPPL S ++L K S+ Sbjct: 103 ITSETFRGSLKSIAGEQHDACIALSLSPHVKIVYVIFPQALLRAIPPLLSNVVSLFKESA 162 Query: 340 LAVAVGFADLVSVGGTIINQTGQAIE----IILIWMFIYLSLSIMIALFMNRLNAKIA 393 L +VG ADL+ VG + N T + +E + +I+ + L+ ++ + +R+ + A Sbjct: 163 LISSVGIADLMFVGQNVSNSTARPVEFLTTVAVIYFLVAFPLTRLVGVVESRMLRRYA 220 >gi|300741912|ref|ZP_07071933.1| glutamate transport system permease protein GluD [Rothia dentocariosa M567] gi|300381097|gb|EFJ77659.1| glutamate transport system permease protein GluD [Rothia dentocariosa M567] Length = 311 Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 39/115 (33%), Positives = 74/115 (64%), Gaps = 2/115 (1%) Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 L +F++I S + F+++ I L+ Y + IAE++RSG+ +PRGQ EA +A+GLT + Sbjct: 136 LSRFSWINPSQL--PFLAVVIGLTFYNGSVIAELLRSGVKQLPRGQGEAGLAIGLTPGQT 193 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365 R +L+PQA S++P + SQ++ +LK+++L + + +L++ I + G ++ Sbjct: 194 LRTILMPQAFNSMMPSMLSQFVVILKDTALGYIISYPELLASARRIGSGDGNVLQ 248 >gi|302549232|ref|ZP_07301574.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Streptomyces viridochromogenes DSM 40736] gi|302466850|gb|EFL29943.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Streptomyces viridochromogenes DSM 40736] Length = 310 Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 64/225 (28%), Positives = 111/225 (49%), Gaps = 17/225 (7%) Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV---- 236 +T+ A V F+LG V++ RLSR T + + ++ +P +V Sbjct: 74 VTLQLTAYATVLGFLLGTVIAFM--RLSRSPVLST-----VAWTYIWIFRSIPMIVQLVF 126 Query: 237 ---LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293 L AL +L P F + +T+ + I L+ + AA+ AEIVR G++AV Sbjct: 127 WFNLSALYEELGLGIPFGPVFVSVDSNTLIGTIGAAVIGLTLHQAAYAAEIVRGGVLAVD 186 Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353 GQ+EAA ALG+ + R ++LPQAMR+I+P ++ + LLK +S+ + +L Sbjct: 187 HGQLEAAAALGIPRLRQIRRIVLPQAMRAILPTAGNEIIGLLKGTSVVYVMSIGELFYQV 246 Query: 354 GTIINQTGQAIEIILI---WMFIYLSLSIMIALFMNRLNAKIALK 395 I + G+ + ++L+ W + SL + ++ R A+ A + Sbjct: 247 QVIYGRNGRVVPLLLVATAWYVVLTSLLSVAQYYVERRYARGADR 291 >gi|261406922|ref|YP_003243163.1| polar amino acid ABC transporter inner membrane subunit [Paenibacillus sp. Y412MC10] gi|261283385|gb|ACX65356.1| polar amino acid ABC transporter, inner membrane subunit [Paenibacillus sp. Y412MC10] Length = 261 Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 64/215 (29%), Positives = 109/215 (50%), Gaps = 7/215 (3%) Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALK 241 T+ I S ++GIV+ F L R + A ++YIS F G P L+ + L Sbjct: 20 TLGVTMLIVAGSLLVGIVVG-FLVALPRLYRIPMLNAFSMVYISFFR--GTPILIQLFLF 76 Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301 Y + P + + I S +P + + + +T AF++E++R+ + AV RGQ+EAA Sbjct: 77 Y---YGLPEMLKLVHIDLSR-APVMVFVILTYGLHTGAFMSEMIRASVTAVDRGQVEAAY 132 Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361 A+G+ +A ++LPQA+ +P ++ + LLK++SLA +G ++ T+ N T Sbjct: 133 AMGMKGHQAFLRIVLPQALAIAVPVFSNMVIALLKDTSLAFTLGLMEMTGKAQTLGNITQ 192 Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 IE L FIYL +S + + R ++ E Sbjct: 193 HFIEAYLALAFIYLVISFTLEKLLLRAERRLMRHE 227 >gi|56961809|ref|YP_173531.1| glutamine ABC transporter permease [Bacillus clausii KSM-K16] gi|56908043|dbj|BAD62570.1| glutamine ABC transporter permease [Bacillus clausii KSM-K16] Length = 212 Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 46/156 (29%), Positives = 85/156 (54%), Gaps = 7/156 (4%) Query: 237 LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296 L+A + +HF P L F P + +++ ++ + A+IAEIVR G+ ++ +GQ Sbjct: 61 LLAQIFFIHFGIPGLLDLRF------DPLYTGIFV-IAINSGAYIAEIVRGGVQSIDKGQ 113 Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356 MEA +LGLT + R ++ PQA++ +IPP +Q++ LK++SL + ADL+ T Sbjct: 114 MEAGRSLGLTGSQTMRYIIWPQAIKVMIPPFGNQFIISLKDTSLLSTIAVADLMYQSRTY 173 Query: 357 INQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 + + L+ YL+++I +L + ++ Sbjct: 174 TGLSASYFDTYLLVCLFYLAITIPASLLLRYTERRL 209 >gi|330466433|ref|YP_004404176.1| amino acid permease [Verrucosispora maris AB-18-032] gi|328809404|gb|AEB43576.1| amino acid permease [Verrucosispora maris AB-18-032] Length = 290 Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 51/183 (27%), Positives = 93/183 (50%), Gaps = 24/183 (13%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 +A+PLL + F+ +GLP ++ +PV F S+ I L+ Y Sbjct: 113 RAVPLLLMIFFVFYGLPYVI----------KQPVTA-------------FWSVVIGLTLY 149 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 + +AE R+G+ A+P GQ EAA A+G+ + +L+L+PQA R+++P + SQ + LLK Sbjct: 150 NGSVLAEAFRAGIRALPGGQSEAAYAIGMRKTQVMQLILIPQAARAMLPIIVSQLVVLLK 209 Query: 337 NSSLAVAVGFADLVSVG-GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395 +++L V + +L+ G + G I ++ IY+ ++ M+ F L + + Sbjct: 210 DTALGYIVAYPELLQRGVNDLAANYGNIIPAAMVIAVIYIIINSMLTWFAGWLERRTGTR 269 Query: 396 EKK 398 + Sbjct: 270 RAR 272 Score = 40.4 bits (93), Expect = 0.54, Method: Compositional matrix adjust. Identities = 37/146 (25%), Positives = 65/146 (44%), Gaps = 22/146 (15%) Query: 19 LYD-----MRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEID 73 LYD +V N + +I + L + W +Y+ +++N G +L + Sbjct: 7 LYDHPGPRAKVRNTVLSVIFGVALLGLVYW----IYSKFDQANQWEG--WLWK------- 53 Query: 74 QGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYV 133 P+ ++ IL G T A GM+ + G + GRLS +K ++ V Sbjct: 54 ----PFAEPKTWTQFILPGLWATLKAAGVGMLLSLAFGIIFAVGRLSEHKWISVPAGAVV 109 Query: 134 EVFRNIPPLVVIFFLYKSVLSVLPIP 159 E FR +P L++IFF++ + V+ P Sbjct: 110 EFFRAVPLLLMIFFVFYGLPYVIKQP 135 >gi|289768689|ref|ZP_06528067.1| glutamate permease [Streptomyces lividans TK24] gi|289698888|gb|EFD66317.1| glutamate permease [Streptomyces lividans TK24] Length = 305 Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 67/221 (30%), Positives = 114/221 (51%), Gaps = 23/221 (10%) Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALK 241 T+ A V + LG VL + RLS H + +P+ + F +P LVL+ Sbjct: 81 TLKAAALSMVIALPLGAVLGI--ARLSDHAWVR----IPVAIVVEFF-RSIPVLVLM--- 130 Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLY---IALSCYTAAFIAEIVRSGLIAVPRGQME 298 + G F + VS + LY L Y A+ +AEIVR+G++A+P+GQ E Sbjct: 131 --------IFGLALFAEYTDVSSDDRPLYAVVTGLVLYNASVLAEIVRAGILALPKGQAE 182 Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV-GFADLVSVGGTII 357 A+A+GL ++ RL+LLPQA+ +++P + SQ + +LK+++L AV F +L++ T+ Sbjct: 183 GAMAIGLRKGQSMRLILLPQAVTTMLPAIVSQLVVILKDTALGGAVLTFPELLASANTMS 242 Query: 358 NQTG-QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 G I + IY++L+ + F + L ++ +K Sbjct: 243 GYYGANVIASFTVVAVIYIALNFSLTTFASWLERRLRRAKK 283 Score = 42.0 bits (97), Expect = 0.17, Method: Compositional matrix adjust. Identities = 28/84 (33%), Positives = 44/84 (52%) Query: 64 LSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK 123 L E+ + + + +TSD ++T I G NT A M+ A +G ++G RLS + Sbjct: 49 LDEKGQLDWAKWQMFFTSDEPWSTYIWPGLQNTLKAAALSMVIALPLGAVLGIARLSDHA 108 Query: 124 LVAWICRVYVEVFRNIPPLVVIFF 147 V + VE FR+IP LV++ F Sbjct: 109 WVRIPVAIVVEFFRSIPVLVLMIF 132 >gi|111019224|ref|YP_702196.1| ABC amino acid transporter, permease component [Rhodococcus jostii RHA1] gi|110818754|gb|ABG94038.1| ABC amino acid transporter, permease component [Rhodococcus jostii RHA1] Length = 285 Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 57/201 (28%), Positives = 107/201 (53%), Gaps = 16/201 (7%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 + F LG+VL++ +RLS H + + +YI F +P +V + + + + Sbjct: 48 ILGFALGVVLAV--SRLS---HNPVLQVIAWVYIWAFR--SIPLIVQLLFWFNITYLYQT 100 Query: 251 L--------GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302 L G F F +S F + I L+ + AA+ AEI+RSG+I+V GQ+EAA + Sbjct: 101 LSLGIPFGPGFFTFEVNGVIS-GFTAAVIGLALHQAAYSAEIIRSGIISVDHGQIEAAQS 159 Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362 LG+ R+ ++LPQAMR I+P ++ ++L K +S+ + A+L I + G+ Sbjct: 160 LGIPRRRQFFKIVLPQAMRGILPNAANEVISLFKGTSIVSTMAIAELFYQVQVIFGRNGR 219 Query: 363 AIEIILIWMFIYLSLSIMIAL 383 + ++++ Y+ L+ ++++ Sbjct: 220 VVPLLMVATIWYIILTTLLSI 240 >gi|25028000|ref|NP_738054.1| putative amino acid ABC transporter permease protein [Corynebacterium efficiens YS-314] gi|23493283|dbj|BAC18254.1| putative amino acid ABC transporter permease protein [Corynebacterium efficiens YS-314] Length = 240 Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 39/77 (50%), Positives = 54/77 (70%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + L AA++AEIVRSG+ AVP GQMEA+ ALG+ R +LPQAMR IIPP ++ Sbjct: 80 LGLGLNEAAYMAEIVRSGIQAVPEGQMEASKALGMGWSLTMRRTVLPQAMRIIIPPTGNE 139 Query: 331 YLNLLKNSSLAVAVGFA 347 +++LK +SL VAV ++ Sbjct: 140 LISMLKTTSLVVAVPYS 156 >gi|115360581|ref|YP_777718.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria AMMD] gi|115285909|gb|ABI91384.1| amino acid ABC transporter membrane protein 2, PAAT family [Burkholderia ambifaria AMMD] Length = 248 Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 48/147 (32%), Positives = 82/147 (55%), Gaps = 4/147 (2%) Query: 251 LGQFNFIGGSTVSPEFMSLYI----ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306 LGQF I S + P Y+ +L+ TA + AEI+R GL+AVP GQ+EA ++GL+ Sbjct: 78 LGQFGVIRESFIWPLLREPYVCAVLSLALCTAGYTAEILRGGLMAVPVGQIEAGYSIGLS 137 Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 R V+ P A+R +P +++ + L+K+++LA V ++ V II QT + E+ Sbjct: 138 GFALLRRVIGPIALRQCLPAYSTEAVLLVKSTALASLVTVWEVTGVAQQIIQQTYRTTEV 197 Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIA 393 + IYL L+ ++ + L +++ Sbjct: 198 FVCAALIYLGLNFIVVRLLGALEWRLS 224 >gi|260777098|ref|ZP_05885992.1| amino acid ABC transporter permease protein [Vibrio coralliilyticus ATCC BAA-450] gi|260606764|gb|EEX33038.1| amino acid ABC transporter permease protein [Vibrio coralliilyticus ATCC BAA-450] Length = 304 Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 47/145 (32%), Positives = 79/145 (54%), Gaps = 1/145 (0%) Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312 Q G ++ +S + + ++A++AEIVRSGL + +GQ EAA ALGL+ R Sbjct: 158 QSMLFGPKSLWENLLSGVLCVGILSSAYVAEIVRSGLAGIAKGQWEAADALGLSTWAKYR 217 Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372 LV+ PQ + +I P L Q ++L+K++S+ + ++ VG + N +G EI LI Sbjct: 218 LVIAPQVLAAITPALAGQAISLVKDTSIVSLISIQEMTFVGTEMANSSGLIFEIWLIVGA 277 Query: 373 IYLSLSIMIALFMNRLNAKIALKEK 397 YL + ++ RL + +LK + Sbjct: 278 TYLIFCLTLSALFKRLE-RHSLKHQ 301 Score = 40.0 bits (92), Expect = 0.69, Method: Compositional matrix adjust. Identities = 20/51 (39%), Positives = 32/51 (62%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142 G ++T L+ GM+ A +GTL+G R S+ + + VY+++ RNIPPL Sbjct: 73 GVISTLRLSVWGMLLALTLGTLIGVARHSSIYVFRSLANVYIQLIRNIPPL 123 >gi|313673707|ref|YP_004051818.1| polar amino acid abc transporter, inner membrane subunit [Calditerrivibrio nitroreducens DSM 19672] gi|312940463|gb|ADR19655.1| polar amino acid ABC transporter, inner membrane subunit [Calditerrivibrio nitroreducens DSM 19672] Length = 290 Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 43/140 (30%), Positives = 80/140 (57%), Gaps = 5/140 (3%) Query: 263 SPE-----FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317 +PE F+S I L+ Y +A+IAEI+R G+ V +GQ++A IALGL + +++P Sbjct: 151 TPEQIFIPFISAAIGLAFYESAYIAEIIRGGINGVEKGQIDAGIALGLNRVQVYLYIVIP 210 Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377 QA+ +P L Q+++++KN+++A V +L I+ + +EI + IY+ + Sbjct: 211 QAIEKTLPSLIGQFVSIIKNTAIASIVAIPELTFQAMEILASSRLILEIWITIFLIYMVM 270 Query: 378 SIMIALFMNRLNAKIALKEK 397 ++ ++ +R +I K K Sbjct: 271 NLFVSSVASRAELRIRRKYK 290 >gi|229131355|ref|ZP_04260255.1| Amino acid ABC transproter, permease [Bacillus cereus BDRD-ST196] gi|228652099|gb|EEL08036.1| Amino acid ABC transproter, permease [Bacillus cereus BDRD-ST196] Length = 230 Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 48/128 (37%), Positives = 75/128 (58%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IAL+ + A+I EI R + +V RGQ+EAA +LG+ + A R ++LPQA R +PPL +Q Sbjct: 89 IALAIHNGAYITEIFRGSIQSVDRGQLEAARSLGMPYPLAMRRIILPQAFRLSLPPLGNQ 148 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++ LK+SSL VG ++L G +I Q ++ +I YL L ++ F+N L Sbjct: 149 FIIGLKDSSLVAYVGLSELWGSGLSIAASNFQQLDTYIIVGLYYLVLVLLFTYFVNLLEK 208 Query: 391 KIALKEKK 398 ++ KE Sbjct: 209 RLQRKENN 216 >gi|148255316|ref|YP_001239901.1| putative amino acid ABC transporter permease [Bradyrhizobium sp. BTAi1] gi|146407489|gb|ABQ35995.1| amino acid ABC transporter membrane protein 2, PAAT family [Bradyrhizobium sp. BTAi1] Length = 506 Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 34/81 (41%), Positives = 57/81 (70%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + ++ ++ A++AE++R GL A+PRGQ EAA ALGL+ K T ++LPQA+R +IP + + Sbjct: 374 VGVALFSGAYMAEVIRGGLQAIPRGQAEAASALGLSWWKTTSFIVLPQALRHVIPGIVNS 433 Query: 331 YLNLLKNSSLAVAVGFADLVS 351 +++L K++SL V DL+ Sbjct: 434 FISLFKDTSLVSIVALFDLLG 454 >gi|302558021|ref|ZP_07310363.1| glutamate permease [Streptomyces griseoflavus Tu4000] gi|302475639|gb|EFL38732.1| glutamate permease [Streptomyces griseoflavus Tu4000] Length = 225 Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 53/152 (34%), Positives = 88/152 (57%), Gaps = 6/152 (3%) Query: 251 LGQFNFIGGSTVSPEFMSLY------IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304 LG + G + +P+ +L + L+ YTAAF+ E +RSG+ VP GQ EAA ALG Sbjct: 74 LGLADIFGVTMGAPDDFALQGFRLAVLGLAAYTAAFVCEALRSGINTVPVGQAEAARALG 133 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364 L + L++LPQA RS+I PL + + L KN+++A A+G A+ + +I Q + Sbjct: 134 LNFTQVLSLIVLPQAFRSVIGPLANVLIALTKNTTVAAAIGVAEAALLMKEMIENEAQTL 193 Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 I ++ F ++ L++ LF+ L+ ++A+K Sbjct: 194 LIGAVFAFGFVVLTLPTGLFLGWLSKRLAVKR 225 Score = 37.4 bits (85), Expect = 4.1, Method: Compositional matrix adjust. Identities = 26/70 (37%), Positives = 36/70 (51%), Gaps = 9/70 (12%) Query: 83 SSYATAILVGFVNTFWLA-----FSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137 S Y L+G FW+ FSG + + + GTL+ A R+S L+ W YV + R Sbjct: 6 SDYDDPTLLG---AFWMTVKLTVFSG-VGSLVWGTLLAAMRVSPVPLMRWFGTAYVNIVR 61 Query: 138 NIPPLVVIFF 147 NIP V+I F Sbjct: 62 NIPLTVIIVF 71 >gi|257056749|ref|YP_003134581.1| amino acid ABC transporter membrane protein [Saccharomonospora viridis DSM 43017] gi|256586621|gb|ACU97754.1| amino acid ABC transporter membrane protein [Saccharomonospora viridis DSM 43017] Length = 287 Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 37/96 (38%), Positives = 64/96 (66%) Query: 254 FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313 F F G + F S+ + L+ Y A +AE+ R+G++++P+GQ EAA A+G+ + RL Sbjct: 119 FFFHYGLALGAPFYSVVLGLTLYNGAVLAEVFRAGILSLPKGQSEAAYAIGMRKSQVMRL 178 Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349 VLLPQA+R+++P + SQ + LLK+++L + + +L Sbjct: 179 VLLPQALRAMMPAIISQLVVLLKDTALGFLITYEEL 214 >gi|271967567|ref|YP_003341763.1| binding-protein-dependent transporter inner membrane component [Streptosporangium roseum DSM 43021] gi|270510742|gb|ACZ89020.1| binding-protein-dependent transport systems inner membrane component [Streptosporangium roseum DSM 43021] Length = 214 Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 46/124 (37%), Positives = 71/124 (57%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + ++ Y AA+IAE +RSG+ AV GQ EAA ALGLT ++ R V+LPQA+R++I PL + Sbjct: 89 VVIALYEAAYIAEALRSGVNAVSAGQGEAARALGLTFGQSLRHVILPQALRTVIQPLGNI 148 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++ L N+SLA A+G DL + + Q I I + Y ++ RL Sbjct: 149 FIALTMNTSLAAAIGVVDLTAAANRVNLMEAQPIPIFVGAGLAYALIAACAGFVTGRLER 208 Query: 391 KIAL 394 ++ + Sbjct: 209 RLVM 212 >gi|163791027|ref|ZP_02185448.1| putative ABC-type amino-acid transporter permease protein [Carnobacterium sp. AT7] gi|159873672|gb|EDP67755.1| putative ABC-type amino-acid transporter permease protein [Carnobacterium sp. AT7] Length = 219 Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 39/103 (37%), Positives = 61/103 (59%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +AL YTAA +AEIVR GL A+P+GQ EAA + G + + ++LPQ + IIP L SQ Sbjct: 91 LALFLYTAAVVAEIVRGGLNAIPKGQFEAAHSQGFSFFQTLLYIILPQTFKKIIPSLLSQ 150 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI 373 + +K++S +G + G I+ + + E+ LI+ F+ Sbjct: 151 VITTIKDTSFLAGLGIMEFTRSGQVILGKVTKTSEVFLIYGFL 193 >gi|260432482|ref|ZP_05786453.1| glutamate/glutamine/aspartate/asparagine transport system permeaseprotein BztC [Silicibacter lacuscaerulensis ITI-1157] gi|260416310|gb|EEX09569.1| glutamate/glutamine/aspartate/asparagine transport system permeaseprotein BztC [Silicibacter lacuscaerulensis ITI-1157] Length = 432 Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 39/96 (40%), Positives = 65/96 (67%), Gaps = 1/96 (1%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+ + I ++ ++AA+IAE++R GL A+PRGQ EAA +LGL + +A RL++LPQA++ IP Sbjct: 297 FLRVVIMITMFSAAYIAEVIRGGLAALPRGQYEAADSLGLDYAQAMRLIILPQALKISIP 356 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVS-VGGTIINQT 360 + + + L K+++L + DLV + G I+ T Sbjct: 357 GIVNVAVGLFKDTTLVSVISMFDLVGMIRGPILAST 392 >gi|297627443|ref|YP_003689206.1| polar amino acid ABC transporter, inner membrane component [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] gi|296923208|emb|CBL57802.1| polar amino acid ABC transporter, inner membrane component [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] Length = 326 Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 32/67 (47%), Positives = 53/67 (79%) Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 +A++AEI R+G+++V GQ EAA ALG++HRK R ++LPQAMR I+PP ++++ ++K+ Sbjct: 186 SAYMAEIARAGIVSVDDGQTEAAEALGMSHRKTMRRIVLPQAMRVIVPPTGNEFIAMIKD 245 Query: 338 SSLAVAV 344 +SL A+ Sbjct: 246 TSLLAAI 252 >gi|282864437|ref|ZP_06273493.1| polar amino acid ABC transporter, inner membrane subunit [Streptomyces sp. ACTE] gi|282560924|gb|EFB66470.1| polar amino acid ABC transporter, inner membrane subunit [Streptomyces sp. ACTE] Length = 288 Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 66/224 (29%), Positives = 120/224 (53%), Gaps = 22/224 (9%) Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233 RGL LT+ A + F LG +L++ RLSR+ +++ YI +L P Sbjct: 75 RGLG---LTLWLTALVMALGFALGTLLAM--GRLSRN---PVLRSVSWGYI--WLFRSTP 124 Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTV---SPEFMSLYIALSCYTAAFIAEIVRSGLI 290 LV + + + P +G TV P +++ I L+ + AA+ AE+VR G++ Sbjct: 125 ILVQLLFWFNIGALYP-----QILGVDTVHLLGPMAVAV-IGLTLHEAAYAAEVVRGGIL 178 Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 +V RGQ+EAA +LGL + R ++LPQAMR+I+PP + + LK +S+ + DL+ Sbjct: 179 SVERGQLEAAQSLGLGPWRRLRRIVLPQAMRAIVPPAGNMLIGTLKGTSIVSIIAVQDLL 238 Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL---FMNRLNAK 391 + ++T Q I ++L+ Y++++ ++++ ++ R A+ Sbjct: 239 YSVQLVYHRTYQVIPLLLVATLWYVAVTSLLSVGQYYVERRYAR 282 >gi|255263812|ref|ZP_05343154.1| ABC-type amino acid transport system permease component [Thalassiobium sp. R2A62] gi|255106147|gb|EET48821.1| ABC-type amino acid transport system permease component [Thalassiobium sp. R2A62] Length = 248 Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 59/226 (26%), Positives = 113/226 (50%), Gaps = 31/226 (13%) Query: 177 SFPTLTMDTNAKIFVFSFVLGIVLSL------FATRLSRHFHEKTGKALPLLYISTFLIF 230 ++ T+ M A + S V+G++++L R+ + + +A+P+L + ++ + Sbjct: 47 AYNTILMSLTA--ILISVVVGLLVALPGLSDKRGWRIFNRTYVEVVRAVPILVLILWVYY 104 Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290 GLPTL + L F + +AL+ +AF AEI R+G+ Sbjct: 105 GLPTLTGLTLNV-----------------------FWAGVLALALSDSAFQAEIFRAGIQ 141 Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 ++ +GQ EAA ++ L +R R ++LPQA+R I+P L +Q + +LK SSL +G +L Sbjct: 142 SIGKGQYEAAQSISLNYRDTMRYIILPQAIRRILPALGNQLVYMLKMSSLVSVIGMQELT 201 Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 ++ + +EI I + YL L ++++ + L +++ E Sbjct: 202 RKANELVVSEYRPLEIYTILVLEYLVLILIVSAGVRWLESRMTASE 247 >gi|116695745|ref|YP_841321.1| ABC transporter permease [Ralstonia eutropha H16] gi|113530244|emb|CAJ96591.1| ABC-type transporter, permease component: PAAT family [Ralstonia eutropha H16] Length = 216 Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 52/162 (32%), Positives = 86/162 (53%), Gaps = 11/162 (6%) Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290 G P L+++ L Y + VLG +SP ++ +A+S Y +A++ EI R + Sbjct: 62 GTPVLIVLFLSY---YGLSVLGL-------KLSPMVAAM-LAMSIYASAYLGEIWRGCIE 110 Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 AVP+GQ EA+ AL LT + R V+LPQA+R +PP + L+KN+S+ +G +L Sbjct: 111 AVPQGQWEASEALALTRWQQLRYVVLPQAVRLALPPTVGFSVQLVKNTSITSIIGVIELT 170 Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 G I N T Q + ++ IY +L ++ R+ ++ Sbjct: 171 RAGQLINNATFQPFAVFVVVALIYFALCFPLSAAARRMERRL 212 >gi|326332071|ref|ZP_08198356.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Nocardioidaceae bacterium Broad-1] gi|325950209|gb|EGD42264.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Nocardioidaceae bacterium Broad-1] Length = 299 Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 57/140 (40%), Positives = 76/140 (54%), Gaps = 9/140 (6%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE-------FMSL 269 AL YI F L L++I L F P +G G S VS + F++ Sbjct: 110 NALSWFYIWFFRSLPLVVLLIIIFNASLFF--PQIGINIPFGPSLVSYDVEGLLVPFVAA 167 Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329 + LS AAF AEI+R GL++V GQ+EAA ALGL+ + R V+LPQA+RSI+P + Sbjct: 168 VVGLSLNEAAFAAEIIRGGLLSVDHGQIEAANALGLSPWRRLRQVVLPQALRSIVPGYVN 227 Query: 330 QYLNLLKNSSLAVAVGFADL 349 Q + L+K SSL V DL Sbjct: 228 QLIGLVKASSLVYYVSLVDL 247 >gi|307306804|ref|ZP_07586545.1| polar amino acid ABC transporter, inner membrane subunit [Sinorhizobium meliloti BL225C] gi|306902095|gb|EFN32693.1| polar amino acid ABC transporter, inner membrane subunit [Sinorhizobium meliloti BL225C] Length = 290 Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 47/148 (31%), Positives = 84/148 (56%), Gaps = 4/148 (2%) Query: 231 GLPTLVLIALKYQLHFDKPVLG---QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287 G P L+ + L + L P LG F F ++P F++ + L A+ +E+VRS Sbjct: 116 GAPALLQLMLWFNLALIFPTLGIPGLFEFRTVDVMTP-FVAAVLGLGISQGAYTSEVVRS 174 Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347 GL++V GQ EAA +G+T R ++LPQAMR ++PP+ ++ + ++K +SLA + ++ Sbjct: 175 GLLSVDSGQYEAARTIGMTQMMMLRRIVLPQAMRVMVPPVGNEVIGMVKLTSLASVIQYS 234 Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYL 375 +++ I + +E++L+ F YL Sbjct: 235 EILHNAQIIYFANTRVLELLLVASFWYL 262 Score = 41.2 bits (95), Expect = 0.32, Method: Compositional matrix adjust. Identities = 24/74 (32%), Positives = 38/74 (51%) Query: 70 FEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWIC 129 F + Q Y D +A AILVG NT + + M ++G ++ R+S N +++ I Sbjct: 48 FSVGQIEWSYVRDFLFAPAILVGLYNTLLMTVAAMGLGIVLGVVIAIMRISGNPVLSSIA 107 Query: 130 RVYVEVFRNIPPLV 143 Y+ VFR P L+ Sbjct: 108 IGYIWVFRGAPALL 121 >gi|170718972|ref|YP_001783435.1| polar amino acid ABC transporter inner membrane subunit [Haemophilus somnus 2336] gi|168827101|gb|ACA32472.1| polar amino acid ABC transporter, inner membrane subunit [Haemophilus somnus 2336] Length = 243 Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 55/204 (26%), Positives = 102/204 (50%), Gaps = 13/204 (6%) Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249 F+ V+ I ++L S + + +YIS +I G P LV I++ + + P Sbjct: 48 FILGMVIAIAVALIRVSPSHSIIHRLFLFITKIYIS--IIRGTPMLVQISIVF---YGLP 102 Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309 LG F + P + I S A+ +E VR+ + +VP+GQ EA +G+T+ + Sbjct: 103 ALGIF-------IDP-IPAAIIGFSLNVGAYASETVRAAIQSVPKGQWEAGYTIGMTYMQ 154 Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369 R +++PQA R +PPL++ +++L K++SLA V ++ V + N + + + + Sbjct: 155 TFRRIIVPQAFRVAVPPLSNTFISLFKDTSLASVVTVTEMFRVAQQVANMSYDFLPVYIE 214 Query: 370 WMFIYLSLSIMIALFMNRLNAKIA 393 IY ++ L+ R+ K+A Sbjct: 215 AALIYWCFCFILFLWQARIEKKLA 238 >gi|150377104|ref|YP_001313700.1| polar amino acid ABC transporter inner membrane subunit [Sinorhizobium medicae WSM419] gi|150031651|gb|ABR63767.1| polar amino acid ABC transporter, inner membrane subunit [Sinorhizobium medicae WSM419] Length = 290 Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 47/148 (31%), Positives = 84/148 (56%), Gaps = 4/148 (2%) Query: 231 GLPTLVLIALKYQLHFDKPVLG---QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287 G P L+ + L + L P LG F F ++P F++ + L A+ +E+VRS Sbjct: 116 GAPALLQLMLWFNLALIFPTLGIPGLFEFRTVDVMTP-FVAAVLGLGLSQGAYTSEVVRS 174 Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347 GL++V GQ EAA +G+T R ++LPQAMR ++PP+ ++ + ++K +SLA + ++ Sbjct: 175 GLLSVDSGQYEAARTIGMTQMMMLRRIVLPQAMRVMVPPVGNEVIGMVKLTSLASVIQYS 234 Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYL 375 +++ I + +E++L+ F YL Sbjct: 235 EILHNAQIIYFANTRVLELLLVASFWYL 262 Score = 40.4 bits (93), Expect = 0.45, Method: Compositional matrix adjust. Identities = 24/74 (32%), Positives = 37/74 (50%) Query: 70 FEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWIC 129 F + Q Y D +A AIL G NT + + M ++G ++ R+S N +++ I Sbjct: 48 FSVGQIEWSYVRDFLFAPAILAGLYNTLLMTIAAMGVGIVLGVVIAIMRISGNPVLSSIA 107 Query: 130 RVYVEVFRNIPPLV 143 YV VFR P L+ Sbjct: 108 IGYVWVFRGAPALL 121 >gi|325261529|ref|ZP_08128267.1| amino acid ABC transporter, permease/substrate-binding protein [Clostridium sp. D5] gi|324032983|gb|EGB94260.1| amino acid ABC transporter, permease/substrate-binding protein [Clostridium sp. D5] Length = 230 Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 56/229 (24%), Positives = 116/229 (50%), Gaps = 16/229 (6%) Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226 +G F+ + + + ++ F+ ++GIV+ F + R ++KTGK L +I Sbjct: 10 YGNFIEDNRWEYILDGLGVTLQVTFFAVIIGIVIG-FLIAIIRSTYDKTGKLKILNFICK 68 Query: 227 F---LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283 +I G P +V + + Y F G + +S +++ +A + A++AE Sbjct: 69 IYLTVIRGTPVVVQLLIIY-----------FVIFGSADISKVLVAI-MAFGFNSGAYVAE 116 Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343 I RSG++++ GQ EA +LG + + +++PQA ++++P L ++++ LLK +S++ Sbjct: 117 IFRSGIMSIDNGQFEAGRSLGFNYVQTMIHIIMPQAFKNVLPALGNEFIVLLKETSVSGY 176 Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 + DL G I ++T A ++ IYL + ++ +N L ++ Sbjct: 177 IALQDLTKGGDIIRSRTYDAFMPLIAVALIYLVMVMIFTKLVNMLERRL 225 >gi|311107899|ref|YP_003980752.1| amino ABC transporter permease, 3-TM region, His/Glu/Gln/Arg/opine family domain-containing protein 14 [Achromobacter xylosoxidans A8] gi|310762588|gb|ADP18037.1| amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family domain protein 14 [Achromobacter xylosoxidans A8] Length = 229 Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 37/84 (44%), Positives = 57/84 (67%) Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329 +++LS YT+ ++AEIV + AVPRGQ E A+ LGL + RLV+LPQAMR I+ P++ Sbjct: 96 FVSLSVYTSCYVAEIVMGAIQAVPRGQTEGAMTLGLRPFQILRLVILPQAMRLIVQPMSG 155 Query: 330 QYLNLLKNSSLAVAVGFADLVSVG 353 Y+ L+K++++ VG +L G Sbjct: 156 VYVMLIKSTAILSVVGITELTRQG 179 >gi|283785663|ref|YP_003365528.1| putative cystine ABC transporter, permease protein [Citrobacter rodentium ICC168] gi|282949117|emb|CBG88724.1| putative cystine ABC transporter, permease protein [Citrobacter rodentium ICC168] Length = 222 Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 60/207 (28%), Positives = 109/207 (52%), Gaps = 18/207 (8%) Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251 F +LG VL+L RLS LPL +++ F I LIA + +++ P Sbjct: 32 FGLLLGFVLALM--RLS--------PLLPLRWLARFYISIFRGTPLIAQLFMIYYGLP-- 79 Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311 QF G + P ++ I LS TAA+ AE +R+ + ++ +GQ EAA ++G+T + Sbjct: 80 -QF----GIELDPVPAAM-IGLSLNTAAYAAETLRAAISSIDKGQWEAAASIGMTPWQTM 133 Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371 R +LPQA R +PPL++ +++L+K++SLA + +L I ++T + + L Sbjct: 134 RRAILPQAARVALPPLSNSFISLVKDTSLAATIQVPELFRQAQLITSRTLEVFTMYLAAS 193 Query: 372 FIYLSLSIMIALFMNRLNAKIALKEKK 398 IY ++ +++ N ++ +E++ Sbjct: 194 LIYWVMATVLSSLQNYFENQLNRQERE 220 Score = 36.2 bits (82), Expect = 8.6, Method: Compositional matrix adjust. Identities = 27/97 (27%), Positives = 46/97 (47%), Gaps = 8/97 (8%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G V T L+ GM ++G ++ RLS + W+ R Y+ +FR P + +F + Sbjct: 15 LLKGAVFTLQLSIGGMFFGLLLGFVLALMRLSPLLPLRWLARFYISIFRGTPLIAQLFMI 74 Query: 149 YKSV----LSVLPIPDHSIVLPFGMFLNNRGLSFPTL 181 Y + + + P+P I G+ LN + TL Sbjct: 75 YYGLPQFGIELDPVPAAMI----GLSLNTAAYAAETL 107 >gi|160903091|ref|YP_001568672.1| polar amino acid ABC transporter, inner membrane subunit [Petrotoga mobilis SJ95] gi|160360735|gb|ABX32349.1| polar amino acid ABC transporter, inner membrane subunit [Petrotoga mobilis SJ95] Length = 213 Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 58/204 (28%), Positives = 109/204 (53%), Gaps = 18/204 (8%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 V F LG++L++ T ++ F+ + Y+ +I G P LV + + L++ PV Sbjct: 17 VIGFFLGVLLAVSKTYGNKLFYYIS-------YVFIEIIRGTPLLVQL---FILYYSLPV 66 Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 +G +SP S+ +A S +AA+ AE +R + ++ GQM+AA+++G+ +A Sbjct: 67 IG-------IRLSPILASI-MAFSLNSAAYQAEYLRGAIQSISSGQMQAALSIGMKKWQA 118 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370 RL++LPQA+R IP T++++ LLK SSL+ VG ++++ + ++ + ++ L Sbjct: 119 IRLIILPQALRRFIPSWTNEFIYLLKYSSLSYIVGAPEIMAQAKFVASRNFEFFQVYLFA 178 Query: 371 MFIYLSLSIMIALFMNRLNAKIAL 394 IY L + + KI + Sbjct: 179 AIIYFVLVTIFGEIFRFIEKKIKI 202 >gi|116333810|ref|YP_795337.1| ABC-type amino acid transport system, permease and periplasmic component [Lactobacillus brevis ATCC 367] gi|116099157|gb|ABJ64306.1| ABC-type amino acid transport system, permease and periplasmic component [Lactobacillus brevis ATCC 367] Length = 492 Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 58/197 (29%), Positives = 104/197 (52%), Gaps = 19/197 (9%) Query: 192 FSFVLGIVLSLFATRLSRHFHEKTG-KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 F F+LG++L+L R+ + +TG + L Y+ I G P +V + Y Sbjct: 304 FGFILGVLLAL--ARMGQGGVFRTGLRWLATAYVE--FIRGTPMMVQVMFVY-------- 351 Query: 251 LGQFNFIGGSTVS-PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309 F G V+ P S IA+S + A++AE +R G+ +V GQ EAA +LG++ Sbjct: 352 -----FGLGLIVNLPALTSGIIAISLNSGAYVAEYIRGGINSVDAGQTEAARSLGMSSGA 406 Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369 R V+LPQA+++I P L ++++ L+K+SS+ +G ++L+ + + T + + I + Sbjct: 407 TMRYVILPQALKNIWPSLGNEFITLIKDSSIVSIIGVSELIFQSNIVRSDTYRGVAPIAV 466 Query: 370 WMFIYLSLSIMIALFMN 386 M +Y L+ + +N Sbjct: 467 IMVLYFILTFTASRILN 483 >gi|77459312|ref|YP_348819.1| amino acid ABC transporter permease [Pseudomonas fluorescens Pf0-1] gi|77383315|gb|ABA74828.1| amino acid ABC transporter membrane protein 2, PAAT family [Pseudomonas fluorescens Pf0-1] Length = 220 Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 45/129 (34%), Positives = 73/129 (56%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + + L+ + + +AEIVR L A+PRGQMEA A+GLT ++ VLLPQA+R I+P Sbjct: 91 FQAGALGLTLFCGSHVAEIVRGALQALPRGQMEAGKAIGLTFYQSLGYVLLPQALRQILP 150 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 + ++K S+L +G A+L+ II +T +E L F++ ++ I L Sbjct: 151 TWVNSSTEIVKASTLLSVIGVAELLLSTQQIIARTFMTLEFYLFAGFLFFVINYGIELLG 210 Query: 386 NRLNAKIAL 394 + ++AL Sbjct: 211 RHIEKRVAL 219 >gi|57167933|ref|ZP_00367073.1| amino acid ABC tansporter, permease protein [Campylobacter coli RM2228] gi|305432041|ref|ZP_07401208.1| amino acid ABC superfamily ATP binding cassette transporter, permease protein [Campylobacter coli JV20] gi|57021055|gb|EAL57719.1| amino acid ABC tansporter, permease protein [Campylobacter coli RM2228] gi|304445125|gb|EFM37771.1| amino acid ABC superfamily ATP binding cassette transporter, permease protein [Campylobacter coli JV20] Length = 247 Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 38/93 (40%), Positives = 68/93 (73%), Gaps = 5/93 (5%) Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 AL ++A+IAEIVRSG+ +V +GQMEAA A+GL ++ + + ++LPQA ++I+P L +++ Sbjct: 124 ALGLNSSAYIAEIVRSGINSVDKGQMEAARAMGLDYKTSMKEIILPQATKNILPALANEF 183 Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364 ++L K +S+ VGF ++ + T+ +Q+ QA+ Sbjct: 184 ISLFKETSV---VGFISVIDI--TMQSQSLQAV 211 >gi|163759018|ref|ZP_02166104.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Hoeflea phototrophica DFL-43] gi|162283422|gb|EDQ33707.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Hoeflea phototrophica DFL-43] Length = 235 Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 48/143 (33%), Positives = 79/143 (55%), Gaps = 4/143 (2%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G V+P +++ IAL Y +A++A++ R + ++P GQ E A ALGL+ K RLV+LPQ Sbjct: 88 GVNVNP-WLAASIALVVYASAYLADVWRGAVESIPAGQWEGARALGLSFLKIVRLVILPQ 146 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW---MFIYL 375 A+R + P + ++K +SLA +GF DL+S+G N E +I+ IY Sbjct: 147 AVRISLAPTVGFTVQIIKGTSLAYIIGFYDLMSIGKRWANAPVSGTEPYVIFPLMALIYF 206 Query: 376 SLSIMIALFMNRLNAKIALKEKK 398 L ++++ RL ++ K Sbjct: 207 CLCFPLSVWARRLERRLGAVSSK 229 >gi|330965315|gb|EGH65575.1| amino acid ABC transporter permease [Pseudomonas syringae pv. actinidiae str. M302091] Length = 220 Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 48/164 (29%), Positives = 89/164 (54%), Gaps = 11/164 (6%) Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292 P LVLI L Y F P LG + S + LS Y A++ E+ R+GL+++ Sbjct: 68 PILVLILLIY---FALPGLG--------IRLDKLASFVVTLSLYAGAYLTEVFRAGLLSI 116 Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352 +GQ EA +A+GL + +++P +R+++P L++ +++L K++SLA A+ +L Sbjct: 117 HKGQREAGLAIGLGEWQVRAYIIVPVILRNVLPALSNNFISLFKDTSLAAAIAVPELTYY 176 Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 I ++ + IE L+ +Y+ +IAL + L ++A++ Sbjct: 177 ARKINVESYRVIETWLVTTALYVVACYVIALLLRTLEQRLAIRR 220 >gi|294851193|ref|ZP_06791866.1| polar amino acid transport system permease [Brucella sp. NVSL 07-0026] gi|294819782|gb|EFG36781.1| polar amino acid transport system permease [Brucella sp. NVSL 07-0026] Length = 240 Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 49/168 (29%), Positives = 90/168 (53%), Gaps = 8/168 (4%) Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279 PL +IS+ + + I + Y + P +G PE + IAL+ + ++ Sbjct: 50 PLRWISSAYVEWFRNIPFIVVLYLFFYGLPFMG--------VRLPESIVGTIALAFFASS 101 Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339 + AEI+R ++AVP+GQMEAA A+G+++ + ++ PQ +R ++PP T+ ++++K +S Sbjct: 102 YFAEIIRGAILAVPQGQMEAARAIGMSYFQGLYEIVAPQTVRLLLPPSTNTSISMVKETS 161 Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387 + + A+L G I +T EI L IY ++ + A M+R Sbjct: 162 VLSTITVAELTYQGLVIQGETFAPFEIFLTTAAIYWMITAIFAYLMHR 209 >gi|323525256|ref|YP_004227409.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia sp. CCGE1001] gi|323382258|gb|ADX54349.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. CCGE1001] Length = 225 Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 59/213 (27%), Positives = 108/213 (50%), Gaps = 10/213 (4%) Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240 +T+ A +F G VL++F+ LS H + + Y+S F +P LV++ L Sbjct: 22 ITLQITAVAILFGLAWGTVLAIFS--LSTH---RALRIFTQAYVSLFR--SIP-LVMLLL 73 Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300 + L + + FN ST+ +S A S AAF EI+R+G+ ++PRGQ++A Sbjct: 74 WFFLIVPQLLKALFNL--PSTIDLRLISALTAYSLLEAAFFCEIIRAGIASLPRGQLQAG 131 Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 ALG+T + R V+LPQA R+++P +Q + + +++SL + D I + Sbjct: 132 HALGMTSGQTLRYVILPQAFRAMVPLALTQCIVIFQDTSLVYVIALGDFFRRVTAIGERD 191 Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393 G + ++++ Y +++ M+ N + + A Sbjct: 192 GNIVPMLIVAGVAYWAITTMLIAITNGVRMRFA 224 >gi|167745542|ref|ZP_02417669.1| hypothetical protein ANACAC_00233 [Anaerostipes caccae DSM 14662] gi|167655263|gb|EDR99392.1| hypothetical protein ANACAC_00233 [Anaerostipes caccae DSM 14662] Length = 227 Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 56/179 (31%), Positives = 99/179 (55%), Gaps = 18/179 (10%) Query: 177 SFPT---LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233 SF T LT+ + + ++GI+ +F+ K + +Y+ +I G P Sbjct: 13 SFSTALGLTLQLALASLICASIIGIIFGMFSVS-----KNKILNIICKIYVD--IIRGTP 65 Query: 234 TLVLIALKY---QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290 +V + + Y F +P+ ++ GG F++ +ALS A++AEIVR G+ Sbjct: 66 LVVQVFIMYYGVAGAFLQPMDLNWDDFGG-----PFVAAVVALSLNAGAYMAEIVRGGIE 120 Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349 +V +GQMEAA +LGL + KA V+LPQA+R+++P + +Q++ +K++SL A+G +L Sbjct: 121 SVDKGQMEAARSLGLPYGKAMSKVILPQAIRTMLPSIINQFIISIKDTSLVYAIGIREL 179 Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust. Identities = 22/57 (38%), Positives = 36/57 (63%) Query: 96 TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSV 152 T LA + +I A+IIG + G +S NK++ IC++YV++ R P +V +F +Y V Sbjct: 21 TLQLALASLICASIIGIIFGMFSVSKNKILNIICKIYVDIIRGTPLVVQVFIMYYGV 77 >gi|148558506|ref|YP_001257650.1| amino acid ABC transporter permease [Brucella ovis ATCC 25840] gi|148369791|gb|ABQ62663.1| amino acid ABC transporter, permease protein [Brucella ovis ATCC 25840] Length = 226 Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 58/201 (28%), Positives = 106/201 (52%), Gaps = 14/201 (6%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 + SF G+ LSL T L R F ++ Y+ F G P LV + + + + P Sbjct: 28 LLSFTFGLALSLL-TALVRLFAPVWLSSVARFYVWIFR--GTPLLVQL---FVIFYGLPS 81 Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 +G + F + I + A+ +EI+R+ + +VP+GQ EAA ++G++ R+A Sbjct: 82 IGIYL--------DAFPAALIGFTLNIGAYSSEIIRAVISSVPKGQWEAAYSIGMSWRQA 133 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370 +LPQA R+ +PPL++ +++L+K++SLA A+ +L I+ T + + + + Sbjct: 134 LIRTILPQATRTAVPPLSNTFISLIKDTSLAAAITVPELFQSAQRIVATTYEPLILYIEA 193 Query: 371 MFIYLSLSIMIALFMNRLNAK 391 IYL+LS +++ RL + Sbjct: 194 ALIYLALSSILSALQVRLERR 214 >gi|119025595|ref|YP_909440.1| glutamine ABC transporter (binding and transport protein) [Bifidobacterium adolescentis ATCC 15703] gi|118765179|dbj|BAF39358.1| similar to glutamine ABC transporter (binding and transport protein) [Bifidobacterium adolescentis ATCC 15703] Length = 501 Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 58/165 (35%), Positives = 89/165 (53%), Gaps = 25/165 (15%) Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249 F + VLG+ L S K L +YI+ F G P LV + +F P Sbjct: 314 FAIALVLGVAFGLMKVSES-----KIAAGLANVYIAVFR--GTPILVW---AFFFYFGVP 363 Query: 250 VLGQFNFIGGSTVSPEFMSLYIA----LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305 L IG S +++++A LS + A++AEIVR + +V GQME A +LGL Sbjct: 364 QL-----IGHS------VNIWVAGALTLSLNSGAYLAEIVRGAVQSVDSGQMEGARSLGL 412 Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 HR+A R V+LPQA + +P + +Q + ++K+SSL +A+GF +L+ Sbjct: 413 NHRQAMRRVILPQASKIAMPSIINQLVIMIKDSSLLLAIGFGELL 457 Score = 40.0 bits (92), Expect = 0.65, Method: Compositional matrix adjust. Identities = 22/62 (35%), Positives = 32/62 (51%) Query: 88 AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147 A+L G NT + A ++G G ++S +K+ A + VY+ VFR P LV FF Sbjct: 298 ALLTGLRNTLLITLLSFAIALVLGVAFGLMKVSESKIAAGLANVYIAVFRGTPILVWAFF 357 Query: 148 LY 149 Y Sbjct: 358 FY 359 >gi|225575188|ref|ZP_03783798.1| hypothetical protein RUMHYD_03277 [Blautia hydrogenotrophica DSM 10507] gi|225037596|gb|EEG47842.1| hypothetical protein RUMHYD_03277 [Blautia hydrogenotrophica DSM 10507] Length = 229 Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 59/227 (25%), Positives = 116/227 (51%), Gaps = 20/227 (8%) Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF-- 227 F+ + + T + ++ + ++GI+L LF + R ++KT K L +I Sbjct: 12 FVTDDRWKYITDGLKVTLEVTFLAVLIGILLGLFVA-IVRSTYDKTHKLKILNFICNIYI 70 Query: 228 -LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286 +I G P +V + + Y F VS F+++ +A + A++AEI R Sbjct: 71 TVIRGTPVVVQLLIIY-----------FVVFASMDVSKVFVAV-MAFGMNSGAYVAEIFR 118 Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346 SG++++ +GQ EA +LG + + +++PQA ++++P L ++++ LLK +S+A + Sbjct: 119 SGIMSIDQGQFEAGRSLGFNYAQTMVHIIMPQAFKNVLPALGNEFIVLLKETSVAGYIAL 178 Query: 347 ADLVSVGGTIINQTGQA----IEIILIWMFIYLSLSIMIALFMNRLN 389 DL G I ++T A I + LI++ + + + ++AL RL Sbjct: 179 QDLTKGGDIIRSRTYDAFMPLIAVALIYLVMVMIFTKLVALLERRLR 225 >gi|218661449|ref|ZP_03517379.1| probable amino acid ABC transporter, permease protein [Rhizobium etli IE4771] Length = 222 Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 48/128 (37%), Positives = 74/128 (57%), Gaps = 4/128 (3%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IAL+ Y A +E R+ L ++ R Q++A +ALGL R V+LPQA+ +P L S Sbjct: 95 IALTLYMGAITSETFRASLKSIGREQLDACVALGLPQRVRVVNVVLPQAVLRAVPTLLSN 154 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII----LIWMFIYLSLSIMIALFMN 386 ++L K S+L AVG ADL+ VG I N T + +E++ LI+ I L+ ++L Sbjct: 155 CVSLFKESALVSAVGMADLMFVGQNISNNTARPVEVLTVVALIYFVIAFPLTRAVSLVEG 214 Query: 387 RLNAKIAL 394 R+ K+A+ Sbjct: 215 RILKKLAI 222 >gi|323697764|ref|ZP_08109676.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio sp. ND132] gi|323457696|gb|EGB13561.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio desulfuricans ND132] Length = 294 Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 41/125 (32%), Positives = 74/125 (59%) Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315 F G P F+S I L+ + AA+IAEIVR+G+ +V GQ EAA GLT ++ V+ Sbjct: 156 FFGPMNRFPRFLSALITLALFEAAYIAEIVRAGIESVEPGQWEAAAGTGLTRTQSLVHVI 215 Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375 LPQA++ ++P L Q+++++K+S++ + +L ++ T ++ EI + + +Y Sbjct: 216 LPQALQRMLPALAGQFISIIKDSAIVSVISIEELTFQAQQLMTTTYRSFEIWTLVLVMYF 275 Query: 376 SLSIM 380 L+ + Sbjct: 276 VLTFL 280 Score = 36.2 bits (82), Expect = 9.5, Method: Compositional matrix adjust. Identities = 26/69 (37%), Positives = 40/69 (57%), Gaps = 3/69 (4%) Query: 83 SSYATAILV-GFVNTFWLA-FSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140 S+A +L G T L+ +SG++ A ++G +VG R+S + + VYV + RN P Sbjct: 58 GSWAPGLLTQGLFTTIRLSVWSGLL-AMVLGVVVGLFRVSPSLFKRQVGAVYVGLIRNTP 116 Query: 141 PLVVIFFLY 149 PLV+IF Y Sbjct: 117 PLVLIFVFY 125 >gi|307693268|ref|ZP_07635505.1| polar amino acid ABC transporter, inner membrane subunit [Ruminococcaceae bacterium D16] Length = 245 Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 39/113 (34%), Positives = 75/113 (66%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+ +AL+ ++A++AEI R+G++AV GQ EAA +LGL+ ++ RLV+LPQA+++++P Sbjct: 113 FIPSVVALALNSSAYVAEIFRAGILAVDAGQTEAARSLGLSSWQSMRLVVLPQAVKNVLP 172 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378 L ++ + ++K SS+ +G DL+ T+I + A+ +++ IY ++ Sbjct: 173 ALANEVVTMVKESSICSVIGVYDLMWGAKTVITNSYIAVGPLVLAAIIYFCIN 225 Score = 42.4 bits (98), Expect = 0.14, Method: Compositional matrix adjust. Identities = 23/72 (31%), Positives = 39/72 (54%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151 G T L+ ++ A I L+ RLS +++V WI Y+ +FR+ P LV ++ +Y Sbjct: 33 GVKYTLMLSVVAVLLAVIPALLLALMRLSKSRIVRWISGAYIAIFRSTPMLVQLYIIYLG 92 Query: 152 VLSVLPIPDHSI 163 V S + +P +I Sbjct: 93 VFSFIEVPKMTI 104 >gi|28869963|ref|NP_792582.1| amino acid ABC transporter permease [Pseudomonas syringae pv. tomato str. DC3000] gi|28853208|gb|AAO56277.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tomato str. DC3000] Length = 220 Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 44/129 (34%), Positives = 72/129 (55%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + I L+ + + ++EIVR L A+PRGQ+EA A+GL + R VLLPQAMR I+P Sbjct: 91 FQAGAIGLTLFCGSHVSEIVRGALQAIPRGQIEAGKAIGLRFNQTLRYVLLPQAMRQILP 150 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 + ++K S+L +G A+L+ +I +T +E L F++ ++ I L Sbjct: 151 TWVNSSTEIVKASTLLSVIGVAELLLSTQQVIARTFMTLEFYLFAGFLFFLINYAIELLG 210 Query: 386 NRLNAKIAL 394 + ++AL Sbjct: 211 RHIEKRVAL 219 >gi|72161211|ref|YP_288868.1| amino acid ABC transporter permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Thermobifida fusca YX] gi|71914943|gb|AAZ54845.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Thermobifida fusca YX] Length = 327 Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 42/127 (33%), Positives = 79/127 (62%), Gaps = 3/127 (2%) Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327 ++ I L+ Y + +AE+ R+G+ AVP+GQ EAA +LG+ + +L+PQA+RS++P + Sbjct: 174 AVVIGLTLYNGSVLAEVFRAGINAVPKGQSEAAYSLGMNKVQVMWWILIPQAVRSMMPAI 233 Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI---MIALF 384 +Q + LLK+++L + F +L+ I + G I LI IY++++I +A++ Sbjct: 234 VAQLVILLKDTALGYIIAFPELLRSFSLIGTRYGNVIPAALICAVIYIAINISLSRLAIW 293 Query: 385 MNRLNAK 391 + + NA+ Sbjct: 294 LEKRNAR 300 >gi|297579917|ref|ZP_06941844.1| amino acid ABC transporter [Vibrio cholerae RC385] gi|297535563|gb|EFH74397.1| amino acid ABC transporter [Vibrio cholerae RC385] Length = 298 Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 44/134 (32%), Positives = 76/134 (56%) Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317 G + + +S + + ++A+IAEIVR+GL +P GQ EAA +LGL++ R V+ P Sbjct: 158 GPARLWENLLSGVLCIGLLSSAYIAEIVRAGLANIPPGQWEAADSLGLSNWVKYRYVIAP 217 Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377 Q + +I P L Q ++L+K++S+ + +L VG I N +G EI LI YL L Sbjct: 218 QVLTAITPALAGQTISLIKDTSIISLISIQELTFVGSEIANSSGLIFEIWLIVGAAYLVL 277 Query: 378 SIMIALFMNRLNAK 391 + +++ ++ + Sbjct: 278 CLTLSMLFKQVEKR 291 Score = 37.0 bits (84), Expect = 5.6, Method: Compositional matrix adjust. Identities = 23/57 (40%), Positives = 35/57 (61%), Gaps = 8/57 (14%) Query: 90 LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRV----YVEVFRNIPPL 142 L G V T L+ GM+ A ++G+L+G R ++K AW R+ +V++ RNIPPL Sbjct: 66 LQGLVATLRLSLWGMVLALVLGSLIGIAR--SHK--AWFVRLPANAFVQLVRNIPPL 118 >gi|331003246|ref|ZP_08326753.1| hypothetical protein HMPREF0491_01615 [Lachnospiraceae oral taxon 107 str. F0167] gi|330412899|gb|EGG92279.1| hypothetical protein HMPREF0491_01615 [Lachnospiraceae oral taxon 107 str. F0167] Length = 230 Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 58/201 (28%), Positives = 102/201 (50%), Gaps = 29/201 (14%) Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF---LIFGLPTLVLIALKY-----Q 243 F+ +LG VL F+ + R+ ++ T + L +I +I G P +V + + Y Sbjct: 35 FAVILGFVLG-FSVAVVRNIYDNTKRLKFLNFICNIYLTVIRGTPVVVQLLIIYFVIFSS 93 Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 + DK V + +A + A+ AEI RSG+ +VP+GQMEA +L Sbjct: 94 MRVDKSV-----------------AAILAFGINSGAYQAEIFRSGINSVPKGQMEAGRSL 136 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363 G + + +++PQA+++I+P L ++++ L+K +S+A + DL G I ++T A Sbjct: 137 GFNYAQTMIFIIMPQAIKNILPTLANEFIVLMKETSVAGYIALEDLTKAGDVIRSRTYSA 196 Query: 364 IEIILIWMFIYLSLSIMIALF 384 + L +YL IM+ LF Sbjct: 197 MMPFLAVALLYL---IMVMLF 214 >gi|302526883|ref|ZP_07279225.1| predicted protein [Streptomyces sp. AA4] gi|302435778|gb|EFL07594.1| predicted protein [Streptomyces sp. AA4] Length = 495 Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 43/131 (32%), Positives = 78/131 (59%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P + ++L Y+ +++ EI R + ++ RGQ+EAA + G++ A R V++PQA + Sbjct: 363 PPMTAGIVSLGLYSGSYVTEIFRGAVQSIDRGQLEAARSCGMSQVSAMRHVIIPQAFLRM 422 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 +PPL +++++L KNS+L V +L VG TII++T A+ + L +Y L+ +I+ Sbjct: 423 LPPLGNEFVSLTKNSALVSFVTIHELFLVGQTIISRTFDALTVYLFIGLLYYLLTNLISG 482 Query: 384 FMNRLNAKIAL 394 L K+A+ Sbjct: 483 TTRTLEKKMAV 493 >gi|237731964|ref|ZP_04562445.1| polar amino acid ABC transporter [Citrobacter sp. 30_2] gi|226907503|gb|EEH93421.1| polar amino acid ABC transporter [Citrobacter sp. 30_2] Length = 222 Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 58/207 (28%), Positives = 107/207 (51%), Gaps = 18/207 (8%) Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251 F VLG +L+L RLS LP+ +++ F I LIA + +++ P Sbjct: 32 FGLVLGFILALM--RLS--------PLLPVRWLARFYISIFRGTPLIAQLFMIYYGLP-- 79 Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311 QF G + P + I LS TAA+ AE +R+ + ++ +GQ EA ++G+T + Sbjct: 80 -QF----GIELDP-IPAAMIGLSLNTAAYAAETLRAAISSIDKGQWEAGASIGMTRWQTM 133 Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371 R +LPQA R +PPL++ +++L+K++SLA + +L I ++T + + L Sbjct: 134 RRAILPQAARVALPPLSNSFISLVKDTSLAATIQVPELFRQAQLITSRTLEVFTMYLAAS 193 Query: 372 FIYLSLSIMIALFMNRLNAKIALKEKK 398 IY ++ +++ N ++ +E++ Sbjct: 194 LIYWVMATVLSALQNYFEEQLNRQERE 220 Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust. Identities = 29/97 (29%), Positives = 46/97 (47%), Gaps = 8/97 (8%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G V T L+ GM ++G ++ RLS V W+ R Y+ +FR P + +F + Sbjct: 15 LLKGAVFTLQLSIGGMFFGLVLGFILALMRLSPLLPVRWLARFYISIFRGTPLIAQLFMI 74 Query: 149 YKSV----LSVLPIPDHSIVLPFGMFLNNRGLSFPTL 181 Y + + + PIP I G+ LN + TL Sbjct: 75 YYGLPQFGIELDPIPAAMI----GLSLNTAAYAAETL 107 >gi|330875048|gb|EGH09197.1| amino acid ABC transporter permease [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 220 Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 48/164 (29%), Positives = 89/164 (54%), Gaps = 11/164 (6%) Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292 P LVLI L Y F P LG + S + LS Y A++ E+ R+GL+++ Sbjct: 68 PILVLILLIY---FALPGLG--------IRLDKLASFVVTLSLYAGAYLTEVFRAGLLSI 116 Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352 +GQ EA +A+GL + +++P +R+++P L++ +++L K++SLA A+ +L Sbjct: 117 HKGQREAGLAIGLGEWQVRAYIIVPVMLRNVLPALSNNFISLFKDTSLAAAIAVPELTYY 176 Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 I ++ + IE L+ +Y+ +IAL + L ++A++ Sbjct: 177 ARKINVESYRVIETWLVTTALYVVACYVIALLLRTLEQRLAIRR 220 >gi|239982701|ref|ZP_04705225.1| glutamate transporter permease [Streptomyces albus J1074] Length = 212 Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 42/93 (45%), Positives = 58/93 (62%), Gaps = 1/93 (1%) Query: 257 IGGSTVSP-EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315 +GG V F + LS YTAAF+ E VRSG+ VP GQ EAA ALGL + L++ Sbjct: 72 LGGEGVKEVAFRMAVLGLSTYTAAFVCESVRSGINTVPVGQAEAARALGLNFTQVLTLIV 131 Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348 LPQA R++I PL + + L KN+++A A+G + Sbjct: 132 LPQAFRTVIGPLANVLIALTKNTTVAAAIGVGE 164 >gi|221196254|ref|ZP_03569301.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia multivorans CGD2M] gi|221202927|ref|ZP_03575946.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia multivorans CGD2] gi|221176861|gb|EEE09289.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia multivorans CGD2] gi|221182808|gb|EEE15208.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia multivorans CGD2M] Length = 500 Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 60/180 (33%), Positives = 94/180 (52%), Gaps = 12/180 (6%) Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256 G++L F L+R H+ K YI F LP LVL+ Y L P + F Sbjct: 35 GVLLG-FPVALARQSHQPALKRAAAAYIWFFR--SLPLLVLLVFIYNL----PQV----F 83 Query: 257 IGGSTV-SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315 STV S F + IA+ A+ AEI R G+++VPRGQ+EA ALG+ R+++ Sbjct: 84 PATSTVLSDPFTAGLIAMVLSETAYFAEIHRGGILSVPRGQLEAGRALGIRFTGIQRMIV 143 Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375 +PQA+R +P L ++++ ++K +SL + A+++ VG + Q E +L F Y+ Sbjct: 144 MPQAIRIALPALANEFITIVKLTSLVSVISLAEILLVGQRLYTQNFLVFETMLAVAFYYV 203 >gi|212704997|ref|ZP_03313125.1| hypothetical protein DESPIG_03065 [Desulfovibrio piger ATCC 29098] gi|212671549|gb|EEB32032.1| hypothetical protein DESPIG_03065 [Desulfovibrio piger ATCC 29098] Length = 266 Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 45/127 (35%), Positives = 78/127 (61%), Gaps = 6/127 (4%) Query: 268 SLYIALS-CYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326 S IALS CY A++ E+ R+G++A+P GQ EAA +LG + V+LPQA R+IIPP Sbjct: 135 SAVIALSFCY-GAYMGEVFRAGILAIPHGQTEAARSLGFNRVQTMFYVVLPQAWRTIIPP 193 Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE----IILIWMFIYLSLSIMIA 382 + ++ + +LK+++L +G DL+ + +++ E + L+++ I L LS +++ Sbjct: 194 VGNECIAMLKDTALVSVIGMPDLMQRARSFASKSYCYFESYTVVALVYLIITLILSKIVS 253 Query: 383 LFMNRLN 389 + RLN Sbjct: 254 IIEARLN 260 Score = 41.6 bits (96), Expect = 0.21, Method: Compositional matrix adjust. Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 3/73 (4%) Query: 80 TSDSSYATAILV---GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136 T Y AI+ G + TF + + A +G L G GR+S N+ + YVEV Sbjct: 49 TGPQVYRDAIIFLPDGLLLTFKVTAYSICGAVPLGLLTGLGRISRNRFFNLLASTYVEVI 108 Query: 137 RNIPPLVVIFFLY 149 R IP LV IF++Y Sbjct: 109 RGIPLLVQIFYIY 121 >gi|154487057|ref|ZP_02028464.1| hypothetical protein BIFADO_00895 [Bifidobacterium adolescentis L2-32] gi|154084920|gb|EDN83965.1| hypothetical protein BIFADO_00895 [Bifidobacterium adolescentis L2-32] Length = 516 Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 58/165 (35%), Positives = 89/165 (53%), Gaps = 25/165 (15%) Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249 F + VLG+ L S K L +YI+ F G P LV + +F P Sbjct: 329 FAIALVLGVAFGLMKVSES-----KIAAGLANVYIAVFR--GTPILVW---AFFFYFGVP 378 Query: 250 VLGQFNFIGGSTVSPEFMSLYIA----LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305 L IG S +++++A LS + A++AEIVR + +V GQME A +LGL Sbjct: 379 QL-----IGHS------VNIWVAGALTLSLNSGAYLAEIVRGAVQSVDSGQMEGARSLGL 427 Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 HR+A R V+LPQA + +P + +Q + ++K+SSL +A+GF +L+ Sbjct: 428 NHRQAMRRVILPQASKIAMPSIINQLVIMIKDSSLLLAIGFGELL 472 Score = 40.0 bits (92), Expect = 0.61, Method: Compositional matrix adjust. Identities = 22/62 (35%), Positives = 32/62 (51%) Query: 88 AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147 A+L G NT + A ++G G ++S +K+ A + VY+ VFR P LV FF Sbjct: 313 ALLTGLRNTLLITLLSFAIALVLGVAFGLMKVSESKIAAGLANVYIAVFRGTPILVWAFF 372 Query: 148 LY 149 Y Sbjct: 373 FY 374 >gi|149908406|ref|ZP_01897069.1| amino acid ABC transporter, permease protein [Moritella sp. PE36] gi|149808569|gb|EDM68504.1| amino acid ABC transporter, permease protein [Moritella sp. PE36] Length = 370 Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 39/112 (34%), Positives = 71/112 (63%), Gaps = 8/112 (7%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I ++ + AA+IAE++R GL A+P+GQ EA+ +LGLT+ + L++LPQA++ IP L Sbjct: 242 IGITLFQAAYIAEVIRGGLQAIPKGQYEASESLGLTYWQGMILIILPQALKISIPNLVGS 301 Query: 331 YLNLLKNSSLAVAVGFAD---LVSVGGTIINQTGQAIE-----IILIWMFIY 374 +++L K+++L + +G D +V++ + N G IE ++ W+F + Sbjct: 302 FISLFKDTTLVLIIGLFDILAMVTLTNSDTNWLGFEIEGYVFVTMIYWVFCF 353 >gi|332161055|ref|YP_004297632.1| glutamine ABC transporter permease protein [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|318604932|emb|CBY26430.1| glutamate transport membrane-spanning protein [Yersinia enterocolitica subsp. palearctica Y11] gi|325665285|gb|ADZ41929.1| glutamine ABC transporter permease protein [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|330860700|emb|CBX70993.1| glutamine transport system permease protein glnP [Yersinia enterocolitica W22703] Length = 218 Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 42/129 (32%), Positives = 76/129 (58%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + + + + A+IAEI R ++++ G EA +ALGL+ R R V+ P A+R ++P Sbjct: 89 FTAAVVTIMINSGAYIAEITRGAVLSIHNGFREAGLALGLSKRDTLRYVIAPLALRRMLP 148 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PL +Q++ +K++SL + +G A+L G II +A+EI IYL +++ ++ + Sbjct: 149 PLGNQWIVSIKDTSLFIVIGVAELTRQGQEIIAGNFRAMEIWSAVAVIYLIITLALSFVL 208 Query: 386 NRLNAKIAL 394 RL K+ + Sbjct: 209 RRLERKLKI 217 >gi|307320801|ref|ZP_07600211.1| polar amino acid ABC transporter, inner membrane subunit [Sinorhizobium meliloti AK83] gi|306893511|gb|EFN24287.1| polar amino acid ABC transporter, inner membrane subunit [Sinorhizobium meliloti AK83] Length = 290 Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 47/148 (31%), Positives = 84/148 (56%), Gaps = 4/148 (2%) Query: 231 GLPTLVLIALKYQLHFDKPVLG---QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287 G P L+ + L + L P LG F F ++P F++ + L A+ +E+VRS Sbjct: 116 GAPALLQLMLWFNLALIFPTLGIPGLFEFRTVDVMTP-FVAAVLGLGISQGAYTSEVVRS 174 Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347 GL++V GQ EAA +G+T R ++LPQAMR ++PP+ ++ + ++K +SLA + ++ Sbjct: 175 GLLSVDSGQYEAARTIGMTQMMMLRRIVLPQAMRVMVPPVGNEVIGMVKLTSLASVIQYS 234 Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYL 375 +++ I + +E++L+ F YL Sbjct: 235 EILHNAQIIYFANTRVLELLLVASFWYL 262 Score = 41.2 bits (95), Expect = 0.32, Method: Compositional matrix adjust. Identities = 24/74 (32%), Positives = 38/74 (51%) Query: 70 FEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWIC 129 F + Q Y D +A AILVG NT + + M ++G ++ R+S N +++ I Sbjct: 48 FSVGQIEWSYVRDFLFAPAILVGLYNTLLMTVAAMGLGIVLGVVIAIMRISGNPVLSSIA 107 Query: 130 RVYVEVFRNIPPLV 143 Y+ VFR P L+ Sbjct: 108 IGYIWVFRGAPALL 121 >gi|251797221|ref|YP_003011952.1| polar amino acid ABC transporter inner membrane protein [Paenibacillus sp. JDR-2] gi|247544847|gb|ACT01866.1| polar amino acid ABC transporter, inner membrane subunit [Paenibacillus sp. JDR-2] Length = 223 Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 44/127 (34%), Positives = 74/127 (58%), Gaps = 6/127 (4%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + I + A+ +EI+R+ ++++P+GQ EAA +LG T +A R ++LPQA R +P Sbjct: 91 FPAAVIGFTLSVGAYGSEIIRAAIVSIPKGQWEAAFSLGETRLQALRRIILPQAARVTVP 150 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM---FIYLSLSIMIA 382 PL++ +++L+K++SLA V +L G I T E +LI+ IYL ++A Sbjct: 151 PLSNSFISLVKDTSLAATVTVTELFQKGQQI---TAAVYEPLLIYCEVALIYLIFCSILA 207 Query: 383 LFMNRLN 389 L +L Sbjct: 208 LLQRQLE 214 >gi|116492831|ref|YP_804566.1| ABC-type amino acid transport system, permease and periplasmic component [Pediococcus pentosaceus ATCC 25745] gi|116102981|gb|ABJ68124.1| amino acid ABC transporter substrate-binding protein, PAAT family / amino acid ABC transporter membrane protein, PAAT family [Pediococcus pentosaceus ATCC 25745] Length = 483 Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 61/194 (31%), Positives = 97/194 (50%), Gaps = 33/194 (17%) Query: 187 AKIF-VFSFVLGIVLSLFATRLSRH----FHEKTGKALPLLYISTFLIFGLPTLVLIALK 241 A IF +F +LG+V + FA +S F + LPLL ++ F+ G+P LV Sbjct: 299 ATIFGIFFGMLGVVPNKFANGVSTTVIYIF-----RGLPLLVLALFIYTGVPNLV----- 348 Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301 G + P F++ I L+ A+ A V+ G+ AV GQMEAA Sbjct: 349 -----------------GEKI-PAFVAGIITLTLNEGAYTAAFVKGGIEAVDGGQMEAAR 390 Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361 +LGL + KA R V+LPQ ++ ++P +Q++ LK++S+ +G +L G II + Sbjct: 391 SLGLPYGKAMRRVILPQGLKIMVPSFINQFIITLKDTSILSIIGILELTQTGKIIIARNL 450 Query: 362 QAIEIILIWMFIYL 375 + +I + IYL Sbjct: 451 EGFKIWTMVALIYL 464 >gi|317492207|ref|ZP_07950636.1| His/Glu/Gln/Arg/opine family amino ABC transporter [Enterobacteriaceae bacterium 9_2_54FAA] gi|316919546|gb|EFV40876.1| His/Glu/Gln/Arg/opine family amino ABC transporter [Enterobacteriaceae bacterium 9_2_54FAA] Length = 231 Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 54/199 (27%), Positives = 104/199 (52%), Gaps = 14/199 (7%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 + SF+ GI++ F T L+R + K K + Y+ ++I G P LV + L + Sbjct: 40 ILSFIGGIIVG-FITALARLYAPKPVKWIFDFYV--WVIRGTPLLVQLFLIF-------- 88 Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 + F + I + A+ +EI+R +I+VP+GQ EA+ ++G++ +A Sbjct: 89 ---YGLPSAGITLDAFPAALIGFTLSVGAYTSEIIRGAIISVPKGQWEASYSIGMSSSQA 145 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370 R V+LPQ++ +PPL++ +++L+K++SLA + ++ I++ T + + + + Sbjct: 146 MRRVILPQSVFVSLPPLSNSFISLIKDTSLAAVITVPEMFLAAQRIVSVTYEPLILYVEA 205 Query: 371 MFIYLSLSIMIALFMNRLN 389 IYL S ++ NRL Sbjct: 206 ALIYLMFSTVLGKLQNRLE 224 >gi|157691133|ref|YP_001485595.1| L-cystine ABC transporter membrane protein [Bacillus pumilus SAFR-032] gi|157679891|gb|ABV61035.1| L-cystine ABC superfamily ATP binding cassette transporter, membrane protein YckJ [Bacillus pumilus SAFR-032] Length = 230 Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 44/135 (32%), Positives = 81/135 (60%), Gaps = 6/135 (4%) Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320 T+ P + S IA S A+ +EI+R+ +++VP+GQ EA ++G+THRK V+LPQA+ Sbjct: 93 TLDP-YPSAIIAFSLNVGAYASEIIRASVLSVPKGQWEAGYSIGMTHRKTLVRVILPQAV 151 Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM---FIYLSL 377 R IPPL++ +++L+K++SLA + A++ I +I+ I+M IY Sbjct: 152 RVSIPPLSNSFISLVKDTSLASQILVAEMFRKSQEI--AAANLDQILFIYMEAALIYWVF 209 Query: 378 SIMIALFMNRLNAKI 392 +++L +++ ++ Sbjct: 210 CFILSLVQHQIEKRL 224 >gi|260886618|ref|ZP_05897881.1| L-cystine ABC transporter, permease protein [Selenomonas sputigena ATCC 35185] gi|330839549|ref|YP_004414129.1| polar amino acid ABC transporter, inner membrane subunit [Selenomonas sputigena ATCC 35185] gi|260863761|gb|EEX78261.1| L-cystine ABC transporter, permease protein [Selenomonas sputigena ATCC 35185] gi|329747313|gb|AEC00670.1| polar amino acid ABC transporter, inner membrane subunit [Selenomonas sputigena ATCC 35185] Length = 214 Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 39/127 (30%), Positives = 78/127 (61%), Gaps = 1/127 (0%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P+ + +A + AA+ AEI R+G+ ++ RGQ EAA +LG+T+ + R +++PQ +R + Sbjct: 82 PDIAAALLAFTLNYAAYFAEIFRAGIQSIGRGQYEAAKSLGMTYTQTMRRIIVPQMIRHV 141 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 +PP++++ +NL+K++SL + DL+ V TI+ + + +F YL+++ ++ Sbjct: 142 LPPVSNETINLVKDTSLIYILAMNDLLRVARTIVQREFDMTPFFVAAVF-YLAMTFVLTW 200 Query: 384 FMNRLNA 390 +L A Sbjct: 201 GFKKLEA 207 >gi|126659707|ref|ZP_01730836.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Cyanothece sp. CCY0110] gi|126619052|gb|EAZ89792.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Cyanothece sp. CCY0110] Length = 391 Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 38/84 (45%), Positives = 58/84 (69%) Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333 + ++AA++AE VR GL +VP+GQ EAA ALGL LV+LPQA+R +IP + Q+++ Sbjct: 271 TLFSAAYLAENVRGGLQSVPQGQTEAAKALGLNTFFVLILVVLPQALRVVIPTIVGQFIS 330 Query: 334 LLKNSSLAVAVGFADLVSVGGTII 357 L K++SL VG DL+ + +I+ Sbjct: 331 LFKDTSLLAIVGLVDLLGISQSIL 354 >gi|302186219|ref|ZP_07262892.1| amino acid ABC transporter permease [Pseudomonas syringae pv. syringae 642] gi|330941852|gb|EGH44589.1| amino acid ABC transporter permease [Pseudomonas syringae pv. pisi str. 1704B] gi|330953423|gb|EGH53683.1| amino acid ABC transporter permease [Pseudomonas syringae Cit 7] gi|330981318|gb|EGH79421.1| amino acid ABC transporter permease [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 220 Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 48/164 (29%), Positives = 89/164 (54%), Gaps = 11/164 (6%) Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292 P LVLI L Y F P LG + S + LS Y A++ E+ R+GL+++ Sbjct: 68 PILVLILLIY---FALPGLG--------IRLDKLASFIVTLSLYAGAYLTEVFRAGLLSI 116 Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352 +GQ EA +A+GL + +++P +R+++P L++ +++L K++SLA A+ +L Sbjct: 117 HKGQREAGLAIGLGEWQVRAYIIVPVMLRNVLPALSNNFISLFKDTSLAAAIAVPELTYY 176 Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 I ++ + IE L+ +Y+ +IAL + L ++A++ Sbjct: 177 ARKINVESYRVIETWLVTTALYVVACYVIALLLRTLEQRLAIRR 220 >gi|163800522|ref|ZP_02194423.1| amino acid ABC transporter, permease protein [Vibrio sp. AND4] gi|159175965|gb|EDP60759.1| amino acid ABC transporter, permease protein [Vibrio sp. AND4] Length = 306 Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 43/146 (29%), Positives = 78/146 (53%) Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307 +P Q F G + + S + +AA++AE+VR+GL + +GQ EAA +LGL+ Sbjct: 157 EPNAIQHFFFGPANLWENLASGVFCIGLLSAAYVAEVVRAGLQGIDKGQWEAADSLGLSL 216 Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367 R ++ PQ +++I P L Q ++L+K++S+ + ++ VG + N +G EI Sbjct: 217 WVKYRFIIAPQVLKAITPALAGQTISLVKDTSIVSLISIQEMTFVGTEMANSSGYIFEIW 276 Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIA 393 LI F+Y + +++ + K A Sbjct: 277 LIVGFVYFLICFGLSMVFRYIEKKSA 302 Score = 36.6 bits (83), Expect = 6.8, Method: Compositional matrix adjust. Identities = 18/51 (35%), Positives = 31/51 (60%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142 G ++T L+ G+ A ++GTL+G R S +K + ++++ RNIPPL Sbjct: 77 GLISTLRLSVWGITFALVLGTLLGLARFSDSKWLRTPANAFIQLVRNIPPL 127 >gi|330837352|ref|YP_004411993.1| amino acid ABC transporter membrane protein 1, PAAT family [Spirochaeta coccoides DSM 17374] gi|329749255|gb|AEC02611.1| amino acid ABC transporter membrane protein 1, PAAT family [Spirochaeta coccoides DSM 17374] Length = 221 Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 35/80 (43%), Positives = 55/80 (68%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I L+ YT AF +V + + AVP+GQ EAA++ G +H ++ +V++PQAMR +PP+ +Q Sbjct: 95 IGLALYTGAFGGAVVEAAIRAVPKGQTEAALSQGFSHLQSMVMVIIPQAMRIALPPMANQ 154 Query: 331 YLNLLKNSSLAVAVGFADLV 350 +NL+KNSS+ V DL+ Sbjct: 155 LVNLIKNSSIMAMVAGGDLM 174 >gi|326574956|gb|EGE24886.1| octopine transport system permease protein OccM [Moraxella catarrhalis 101P30B1] Length = 241 Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 56/186 (30%), Positives = 95/186 (51%), Gaps = 13/186 (6%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQF-----NFIGGSTVSPEFMSLYI 271 +A+P YI F G P LV I L Y LGQF +F+ S + I Sbjct: 52 RAIPATYI--FFFRGTPLLVQIFLIYY------GLGQFTALKESFLWDPIFSQAYWCAII 103 Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 A + T+A+I EIVR ++AVP G++EAA A+G++ R+ V+LP+A ++P +++ Sbjct: 104 AFTLNTSAYIGEIVRGAVMAVPTGELEAADAIGMSKRQKLHRVILPRAFGIMLPAYSNEV 163 Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 + +LK S+LA ++ +L II+ T +E+ IYL +S + + + Sbjct: 164 IFMLKGSALAASITVVELTHKARDIISITYLHLEMFFAAGMIYLVISWVFLFIFRQFEHR 223 Query: 392 IALKEK 397 + ++ Sbjct: 224 VNRHKR 229 >gi|262202137|ref|YP_003273345.1| polar amino acid ABC transporter inner membrane subunit [Gordonia bronchialis DSM 43247] gi|262085484|gb|ACY21452.1| polar amino acid ABC transporter, inner membrane subunit [Gordonia bronchialis DSM 43247] Length = 296 Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 62/195 (31%), Positives = 96/195 (49%), Gaps = 33/195 (16%) Query: 166 PFGMFLNNRGLSFPTLTMDTNAKI--FVFSFVLGIVLSLFATRLSRH--------FHEKT 215 PF + G FP L A + V + +LG VL + RLS H F + Sbjct: 55 PFTKWSTWSGYIFPGLFRTLAAAVVSIVLALILGAVLGI--GRLSDHLWVRMIAGFFVEV 112 Query: 216 GKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSC 275 +A+P+L + F F L L + QL F V G L+ Sbjct: 113 FRAIPVLILMVFTWF-LFALYGVVPASQLAFAAVVTG--------------------LTL 151 Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335 Y + +AEI+RSG+ ++P+GQ EA+ ALGL RL+LLPQA+ +++P L SQ + L Sbjct: 152 YNGSVMAEILRSGINSLPKGQTEASKALGLRKSHMMRLILLPQAVTAMMPALVSQMVVAL 211 Query: 336 KNSSLAVAVGFADLV 350 K+S+L +G+++++ Sbjct: 212 KDSALGYIIGYSEII 226 Score = 44.3 bits (103), Expect = 0.031, Method: Compositional matrix adjust. Identities = 26/72 (36%), Positives = 41/72 (56%) Query: 78 PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137 P+T S+++ I G T A ++ A I+G ++G GRLS + V I +VEVFR Sbjct: 55 PFTKWSTWSGYIFPGLFRTLAAAVVSIVLALILGAVLGIGRLSDHLWVRMIAGFFVEVFR 114 Query: 138 NIPPLVVIFFLY 149 IP L+++ F + Sbjct: 115 AIPVLILMVFTW 126 >gi|218282661|ref|ZP_03488876.1| hypothetical protein EUBIFOR_01462 [Eubacterium biforme DSM 3989] gi|218216424|gb|EEC89962.1| hypothetical protein EUBIFOR_01462 [Eubacterium biforme DSM 3989] Length = 538 Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 40/133 (30%), Positives = 86/133 (64%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P +S+ IAL ++A++AEI+RSG+ +V +GQ EAA +LG+++ +++PQA+++I Sbjct: 406 PMIVSVIIALIINSSAYVAEIIRSGIQSVDKGQREAAKSLGMSNVHMMTKIIIPQAIKNI 465 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 +P L ++++ ++K +SLA +L++V I + T ++IE ++I IY ++ ++ Sbjct: 466 LPALGNEFVMMIKETSLASTFYIGELMTVNSVIKSATYKSIEPLVIVGLIYFIVTYSLSK 525 Query: 384 FMNRLNAKIALKE 396 + + K+++ + Sbjct: 526 LIKYMEGKLSVSD 538 >gi|118473378|ref|YP_884593.1| polar amino acid ABC transporter inner membrane protein [Mycobacterium smegmatis str. MC2 155] gi|118174665|gb|ABK75561.1| ABC polar amino acid family protein transporter, inner membrane subunit [Mycobacterium smegmatis str. MC2 155] Length = 323 Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 65/208 (31%), Positives = 103/208 (49%), Gaps = 18/208 (8%) Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLI-------ALKYQLH 245 VLG VL++ RLS + +AL Y+ F G P LV + AL L Sbjct: 98 GIVLGTVLAVM--RLSAN---PVAQALAFAYVGFF--RGTPVLVQLIFWFNFAALYPHLS 150 Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305 F P + + +SP + + L + AA++AEI+R G+ ++ GQ+EAA ALGL Sbjct: 151 FGIP---GVDIDANALISPVLAGV-LGLGLHEAAYMAEIIRGGIGSIDVGQIEAARALGL 206 Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365 + R ++LPQAMR I+PP ++ + +LK SSL + +L+ I Q I Sbjct: 207 RKNQVLRRIVLPQAMRVIVPPTGNEVVGMLKTSSLVSVLAVGELLYSAQLIYASNYQTIP 266 Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIA 393 ++++ YL L+ +++ RL A Sbjct: 267 LLIVASLWYLVLTAVLSAGQMRLERHFA 294 >gi|306828881|ref|ZP_07462073.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus mitis ATCC 6249] gi|304429059|gb|EFM32147.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus mitis ATCC 6249] Length = 520 Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 40/109 (36%), Positives = 66/109 (60%) Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 +S T A++ EIVR G++AV +GQ EAA ALG+TH + R V+LPQ +R+I+P ++++ Sbjct: 383 VSINTGAYMTEIVRGGILAVDKGQFEAATALGMTHNQTMRKVVLPQVVRNILPATGNEFV 442 Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 +K++S+ + +L G T+ QT Q + I IY L+ + Sbjct: 443 INIKDTSVLNVISVVELYFSGNTVATQTYQYFQTFTIIAVIYFVLTFTV 491 >gi|260583445|ref|ZP_05851193.1| glutamine ABC transporter glutamine-binding protein/permease [Granulicatella elegans ATCC 700633] gi|260158071|gb|EEW93139.1| glutamine ABC transporter glutamine-binding protein/permease [Granulicatella elegans ATCC 700633] Length = 479 Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 52/175 (29%), Positives = 91/175 (52%), Gaps = 23/175 (13%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 + +PL+ ++ F+ FG+P + I L +TV+ L Sbjct: 327 RGIPLIVLTFFIYFGIPQALNIRLD------------------ATVAA-----ITTLGLN 363 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 AA+IAEIVR G+ A+ +GQ EAA++LGL + K+ + ++LPQA+R ++P +Q++ LK Sbjct: 364 AAAYIAEIVRGGINAIDKGQSEAAMSLGLPYYKSMQKIILPQAIRLMVPSFINQFVITLK 423 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 ++S+ +G +L G II + Q+ + I +YL + ++ RL K Sbjct: 424 DTSILSIIGLVELTQTGKIIIARNLQSSSMWFIVGMMYLIVITLLTKISARLERK 478 Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust. Identities = 27/73 (36%), Positives = 40/73 (54%) Query: 86 ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145 A +L G NT W+ F + ATIIG L+G R S ++ I +Y++ R IP +V+ Sbjct: 276 APTLLNGLWNTIWITFVSLAIATIIGVLLGLMRTSRISVLETIATIYIDFMRGIPLIVLT 335 Query: 146 FFLYKSVLSVLPI 158 FF+Y + L I Sbjct: 336 FFIYFGIPQALNI 348 >gi|241113592|ref|YP_002973427.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240861800|gb|ACS59466.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 220 Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 50/178 (28%), Positives = 91/178 (51%), Gaps = 24/178 (13%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 + LP+L + F+ F LP + L DK S + LS Y Sbjct: 65 RNLPILVLVLFVFFALP-------QMGLRLDK-----------------IKSFVLVLSLY 100 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 + A++AE+ R+GL+++PRG EA +A+GLT + ++ P +R+++P L+S ++L K Sbjct: 101 SGAYLAEVFRAGLLSIPRGLTEAGLAIGLTGMQIRSSIIAPLMLRNVLPSLSSTIISLFK 160 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394 ++SLA A+ +L I ++ + IE ++ +Y++ +IA M + +AL Sbjct: 161 DTSLAAAIAVPELTFAARKINVESFRVIETWMVTSALYVAACFLIAAVMRVVERSLAL 218 >gi|164688273|ref|ZP_02212301.1| hypothetical protein CLOBAR_01918 [Clostridium bartlettii DSM 16795] gi|164602686|gb|EDQ96151.1| hypothetical protein CLOBAR_01918 [Clostridium bartlettii DSM 16795] Length = 210 Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 41/133 (30%), Positives = 78/133 (58%), Gaps = 1/133 (0%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P F + +A + +A+IAEI RSG+ ++P GQ EAA LG + ++LPQ ++ I Sbjct: 79 PRFWAAILAFTLNYSAYIAEIYRSGIESIPVGQYEAATVLGFGKAETFFKIILPQVVKRI 138 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 IPP++++ + L+K+++LA +G A++ + G ++ + +I+ +F YL ++ ++ Sbjct: 139 IPPMSNELMTLVKDTALAQVIGVAEIFKLAGATMSSQFSTVPLIVAGVF-YLIMNAVVER 197 Query: 384 FMNRLNAKIALKE 396 F L K+ E Sbjct: 198 FCFYLEKKLDYYE 210 >gi|157146551|ref|YP_001453871.1| glutamine ABC transporter permease protein [Citrobacter koseri ATCC BAA-895] gi|157083756|gb|ABV13434.1| hypothetical protein CKO_02312 [Citrobacter koseri ATCC BAA-895] Length = 219 Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 58/198 (29%), Positives = 108/198 (54%), Gaps = 12/198 (6%) Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256 G+V+ L A +R F + L++I +I G P +V + Y F P+ FN Sbjct: 33 GLVIGLLAG-FARTFGGWIANHVALVFIE--VIRGTPIVVQVMFIY---FALPM--AFND 84 Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316 + + P F + + + + A+IAEI R ++++ +G EA +ALGL+ + R V+L Sbjct: 85 L---RIDP-FSAAVVTIMINSGAYIAEITRGAVLSIHKGFREAGLALGLSRGETIRHVIL 140 Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376 P A+R ++PPL +Q++ +K++SL + +G A+L G II +A+EI YL Sbjct: 141 PLALRRMLPPLGNQWIISIKDTSLFIVIGVAELTRQGQEIIAGNFRALEIWSAVAVFYLI 200 Query: 377 LSIMIALFMNRLNAKIAL 394 ++++++ + RL ++ + Sbjct: 201 ITLVLSFILRRLERRMKI 218 >gi|220929987|ref|YP_002506896.1| polar amino acid ABC transporter inner membrane subunit [Clostridium cellulolyticum H10] gi|220000315|gb|ACL76916.1| polar amino acid ABC transporter, inner membrane subunit [Clostridium cellulolyticum H10] Length = 221 Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 65/216 (30%), Positives = 119/216 (55%), Gaps = 15/216 (6%) Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS--LFATRLSRHFHEKTGKALPLL 222 + FG FL+ F + T++T I + + +LG+++ L ++SR+ K +A+ Sbjct: 1 MDFG-FLSEYWYYFVSGTVNTIV-IAILTVILGVIIGTGLALMKISRN---KILRAIASS 55 Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282 YI I G P LV I L + L L +F+ G + ++ IA+S + A++A Sbjct: 56 YIE--FIRGTPLLVQITLFFYLI----SLPEFHIFGLAM--DRYIPGVIAMSVNSGAYVA 107 Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342 EI+R+G+ AV +GQMEAA ++G T +A R ++LPQA+R+I+P L ++++ ++K SS+ Sbjct: 108 EIIRAGIQAVDKGQMEAARSIGFTSGQAMRYIVLPQAIRNILPALGNEFVVVIKESSILS 167 Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378 + +L+ + + E +++ IY L+ Sbjct: 168 VISITELMRSSDIVKAAIYRPFEPLIVTACIYFVLT 203 >gi|325126636|gb|ADY85966.1| Glutamine ABC transporter, substrate binding and permease protein [Lactobacillus delbrueckii subsp. bulgaricus 2038] Length = 486 Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 67/258 (25%), Positives = 116/258 (44%), Gaps = 34/258 (13%) Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI--FVFSFVLGIVL 200 +V + K + + D SI+ G+ +N G L M I + + V G++L Sbjct: 253 IVNKYTSKKAVKSQVVADTSIL---GLIKDNAGALLQGLWMTIELSIVGILAALVFGLIL 309 Query: 201 SLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQF 254 + + +H + +P++ ++ F+ G+PTL L ++L Sbjct: 310 GIMGIAEHKFWHGLANVIIYIFRGIPMMVLAFFIYIGMPTL----LGHKL---------- 355 Query: 255 NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLV 314 P F + + L A+I IVR G +V GQ EAA +LGL + KA V Sbjct: 356 ---------PLFTAGILTLMLDEGAYIGAIVRGGFESVDVGQWEAARSLGLPYYKALWKV 406 Query: 315 LLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374 + PQ + +IP L +Q++ LK++S+ A+G DL G +I Q Q ++ LI +Y Sbjct: 407 VAPQGFKLMIPSLVNQFIITLKDTSILSAIGVMDLTQTGTNLIAQNFQGFKMWLIIAVMY 466 Query: 375 LSLSIMIALFMNRLNAKI 392 L + ++ N + K+ Sbjct: 467 LIIITLLTWLSNYIQKKM 484 >gi|325275054|ref|ZP_08141042.1| polar amino acid ABC transporter inner membrane subunit [Pseudomonas sp. TJI-51] gi|324099817|gb|EGB97675.1| polar amino acid ABC transporter inner membrane subunit [Pseudomonas sp. TJI-51] Length = 365 Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 38/94 (40%), Positives = 63/94 (67%), Gaps = 6/94 (6%) Query: 264 PEFMSL------YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317 PE MS I + + +A++AE+VR GL A+P+GQ EAA A+GL + +A LV+LP Sbjct: 222 PEGMSFDKLLRAMIGVILFQSAYVAEVVRGGLQAIPKGQYEAAAAMGLGYWRAMGLVILP 281 Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 QA++ +IP + + ++ L K++SL + +G DL++ Sbjct: 282 QALKLVIPGIVNTFIALFKDTSLVIIIGLFDLLN 315 >gi|313124773|ref|YP_004035032.1| ABC amino acid transporter permease/periplasmic component [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|312281336|gb|ADQ62055.1| ABC-type amino acid transport system, permease and periplasmic component [Lactobacillus delbrueckii subsp. bulgaricus ND02] Length = 486 Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 67/258 (25%), Positives = 116/258 (44%), Gaps = 34/258 (13%) Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI--FVFSFVLGIVL 200 +V + K + + D SI+ G+ +N G L M I + + V G++L Sbjct: 253 IVNKYTSKKAVKSQVVADTSIL---GLIKDNAGALLQGLWMTIELSIVGILAALVFGLIL 309 Query: 201 SLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQF 254 + + +H + +P++ ++ F+ G+PTL L ++L Sbjct: 310 GIMGIAEHKFWHGLANVIIYIFRGIPMMVLAFFIYIGMPTL----LGHKL---------- 355 Query: 255 NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLV 314 P F + + L A+I IVR G +V GQ EAA +LGL + KA V Sbjct: 356 ---------PLFTAGILTLMLDEGAYIGAIVRGGFESVDVGQWEAARSLGLPYYKALWKV 406 Query: 315 LLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374 + PQ + +IP L +Q++ LK++S+ A+G DL G +I Q Q ++ LI +Y Sbjct: 407 VAPQGFKLMIPSLVNQFIITLKDTSILSAIGVMDLTQTGTNLIAQNFQGFKMWLIIAVMY 466 Query: 375 LSLSIMIALFMNRLNAKI 392 L + ++ N + K+ Sbjct: 467 LIIITLLTWLSNYIQKKM 484 >gi|226951614|ref|ZP_03822078.1| polar amino acid ABC transporter, inner membrane subunit [Acinetobacter sp. ATCC 27244] gi|294651271|ref|ZP_06728597.1| glutamate/aspartate ABC superfamily ATP binding cassette transporter, permease protein [Acinetobacter haemolyticus ATCC 19194] gi|226837644|gb|EEH70027.1| polar amino acid ABC transporter, inner membrane subunit [Acinetobacter sp. ATCC 27244] gi|292822837|gb|EFF81714.1| glutamate/aspartate ABC superfamily ATP binding cassette transporter, permease protein [Acinetobacter haemolyticus ATCC 19194] Length = 227 Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 40/132 (30%), Positives = 75/132 (56%) Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320 T+ +S +A + AA+ +EIVR+G+ ++P+GQ+ AA ALG+++ ++ RL++LPQA Sbjct: 94 TIDTALVSSIVAFMLFEAAYFSEIVRAGIQSIPKGQVAAAAALGMSYGQSMRLIILPQAF 153 Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380 R + P L Q + L ++S++ A+G D + G + IL +Y ++S + Sbjct: 154 RKMTPLLLQQTIILFQDSTMVYAIGLLDFFRTNYVRGDLMGLLTQYILFAGLVYFTVSAI 213 Query: 381 IALFMNRLNAKI 392 + RL ++ Sbjct: 214 ATFAVKRLQRRL 225 Score = 37.4 bits (85), Expect = 3.8, Method: Compositional matrix adjust. Identities = 23/61 (37%), Positives = 35/61 (57%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151 GF T + I IGTL+ RLS+ K++ I + YV +FR+IP L+V+ + Y + Sbjct: 21 GFSITIKVVVIATIGGIFIGTLLALMRLSSIKVLNLIAQAYVNLFRSIPLLLVLMWFYFA 80 Query: 152 V 152 V Sbjct: 81 V 81 >gi|227891344|ref|ZP_04009149.1| L-cystine ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus salivarius ATCC 11741] gi|301301148|ref|ZP_07207305.1| ABC transporter, permease protein [Lactobacillus salivarius ACS-116-V-Col5a] gi|227866922|gb|EEJ74343.1| L-cystine ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus salivarius ATCC 11741] gi|300851277|gb|EFK79004.1| ABC transporter, permease protein [Lactobacillus salivarius ACS-116-V-Col5a] Length = 231 Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 52/183 (28%), Positives = 94/183 (51%), Gaps = 30/183 (16%) Query: 191 VFSFVLGIVLSLFAT--RLSR------------HFHEKTGKALPLLYISTFLIFGLPTLV 236 + SF+LG++L+L R+S+ F+ ++ PLL + FGLP L Sbjct: 25 IISFILGLILALVTALIRISQTKGPFLVIKAIFRFYVWLFRSTPLLVQLFIVYFGLPYLK 84 Query: 237 LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296 + L + G + P F S I S T A+ +E +R+ + ++P+GQ Sbjct: 85 IKGLAPE---------------GIKLDP-FTSGIIVFSLNTGAYASETIRAAITSIPKGQ 128 Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356 EAA ++G+TH++A +++PQA R +PPL + ++ L+K++SLA ++ ++ V I Sbjct: 129 WEAAASIGMTHKQALMRIIIPQAARVSLPPLANSFIGLVKDTSLAASITIVEMFEVSQQI 188 Query: 357 INQ 359 + Sbjct: 189 AAE 191 >gi|330879088|gb|EGH13237.1| amino acid ABC transporter permease [Pseudomonas syringae pv. glycinea str. race 4] Length = 197 Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 55/195 (28%), Positives = 95/195 (48%), Gaps = 23/195 (11%) Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPT 234 +T+ A V VLG +L+L ++ G +++PLL + T+ +P Sbjct: 19 MTLKLMAMGVVGGLVLGTLLALMRLSSNKLLANVAGAYVNYFRSIPLLLVITWFYLAVP- 77 Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294 L++ D P+ F S +A + AA+ EIVR+G+ ++ + Sbjct: 78 ---FVLRWITGEDTPI-------------GAFASCVVAFMMFEAAYFCEIVRAGVQSISK 121 Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354 GQM AA ALG+ + + RL++LPQA R + P L Q + L +++SL VG D ++ Sbjct: 122 GQMGAAQALGMNYSQMMRLIILPQAFRKMTPLLLQQSIILFQDTSLVYTVGLVDFLNASR 181 Query: 355 TIINQTGQAIEIILI 369 + + G+A E ++I Sbjct: 182 SSGDIIGRANEFLII 196 Score = 45.1 bits (105), Expect = 0.020, Method: Compositional matrix adjust. Identities = 28/65 (43%), Positives = 40/65 (61%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151 G V T L G++ ++GTL+ RLS+NKL+A + YV FR+IP L+VI + Y + Sbjct: 16 GMVMTLKLMAMGVVGGLVLGTLLALMRLSSNKLLANVAGAYVNYFRSIPLLLVITWFYLA 75 Query: 152 VLSVL 156 V VL Sbjct: 76 VPFVL 80 >gi|259506393|ref|ZP_05749295.1| His/Glu/Gln/Arg/opine family amino acid ABC superfamily ATP binding cassette transporter, permease protein [Corynebacterium efficiens YS-314] gi|259166034|gb|EEW50588.1| His/Glu/Gln/Arg/opine family amino acid ABC superfamily ATP binding cassette transporter, permease protein [Corynebacterium efficiens YS-314] Length = 318 Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 39/77 (50%), Positives = 54/77 (70%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + L AA++AEIVRSG+ AVP GQMEA+ ALG+ R +LPQAMR IIPP ++ Sbjct: 158 LGLGLNEAAYMAEIVRSGIQAVPEGQMEASKALGMGWSLTMRRTVLPQAMRIIIPPTGNE 217 Query: 331 YLNLLKNSSLAVAVGFA 347 +++LK +SL VAV ++ Sbjct: 218 LISMLKTTSLVVAVPYS 234 >gi|119489534|ref|ZP_01622295.1| Amino acid ABC transporter, permease protein, 3-TM region,His/Glu/Gln/Arg/opine [Lyngbya sp. PCC 8106] gi|119454613|gb|EAW35760.1| Amino acid ABC transporter, permease protein, 3-TM region,His/Glu/Gln/Arg/opine [Lyngbya sp. PCC 8106] Length = 404 Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 43/113 (38%), Positives = 72/113 (63%), Gaps = 8/113 (7%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + L+ +++A++AE VR GL A+PRGQ+EAA ALGL+ LV+LPQA++ IP + Q Sbjct: 275 VGLTMFSSAYLAENVRGGLQAIPRGQIEAAKALGLSTPLTLGLVVLPQALKISIPSIVGQ 334 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQT---GQAIEI-----ILIWMFIYL 375 +++L ++++L VG +L+ + +I+ G+ E+ IL W+F YL Sbjct: 335 FISLFQDTTLLAIVGLVELLGMSRSILANPKFLGRYSEVYLFIGILYWLFCYL 387 >gi|66045740|ref|YP_235581.1| amino acid ABC transporter permease [Pseudomonas syringae pv. syringae B728a] gi|63256447|gb|AAY37543.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Pseudomonas syringae pv. syringae B728a] Length = 220 Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 48/164 (29%), Positives = 89/164 (54%), Gaps = 11/164 (6%) Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292 P LVLI L Y F P LG + S + LS Y A++ E+ R+GL+++ Sbjct: 68 PILVLILLIY---FALPGLG--------IRLDKLASFIVTLSLYAGAYLTEVFRAGLLSI 116 Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352 +GQ EA +A+GL + +++P +R+++P L++ +++L K++SLA A+ +L Sbjct: 117 HKGQREAGLAIGLGEWQVRAYIIVPVMLRNVLPALSNNFISLFKDTSLAAAIAVPELTYY 176 Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 I ++ + IE L+ +Y+ +IAL + L ++A++ Sbjct: 177 ARKINVESYRVIETWLVTTALYVVACYVIALLLRTLEQRLAIRR 220 >gi|317472894|ref|ZP_07932200.1| inner membrane transporter [Anaerostipes sp. 3_2_56FAA] gi|316899614|gb|EFV21622.1| inner membrane transporter [Anaerostipes sp. 3_2_56FAA] Length = 227 Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 53/172 (30%), Positives = 96/172 (55%), Gaps = 15/172 (8%) Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240 LT+ + + ++GI+ +F+ K + +Y+ +I G P +V + + Sbjct: 20 LTLQLALASLICASIIGIIFGMFSVS-----KNKILNIICKIYVD--IIRGTPLVVQVFI 72 Query: 241 KY---QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQM 297 Y F +P+ ++ GG F++ +ALS A++AEIVR G+ +V +GQM Sbjct: 73 MYYGVAGAFLQPMDLNWDDFGG-----PFVAAVVALSLNAGAYMAEIVRGGIESVDKGQM 127 Query: 298 EAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349 EAA +LGL + KA V+LPQA+R+++P + +Q++ +K++SL A+G +L Sbjct: 128 EAARSLGLPYGKAMSKVILPQAIRTMLPSIINQFIISIKDTSLVYAIGIREL 179 Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust. Identities = 22/57 (38%), Positives = 36/57 (63%) Query: 96 TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSV 152 T LA + +I A+IIG + G +S NK++ IC++YV++ R P +V +F +Y V Sbjct: 21 TLQLALASLICASIIGIIFGMFSVSKNKILNIICKIYVDIIRGTPLVVQVFIMYYGV 77 >gi|294810979|ref|ZP_06769622.1| amino acid ABC transporter permease protein [Streptomyces clavuligerus ATCC 27064] gi|294323578|gb|EFG05221.1| amino acid ABC transporter permease protein [Streptomyces clavuligerus ATCC 27064] Length = 279 Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 44/117 (37%), Positives = 73/117 (62%), Gaps = 5/117 (4%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + L AA+IAE +R+G+ AVPRGQ+EAA +LG +H +A V++PQA R ++PPLT++ Sbjct: 151 LGLGLVAAAYIAETIRAGIQAVPRGQLEAARSLGFSHARAMVSVIIPQAFRIVVPPLTNE 210 Query: 331 YLNLLKNSSLAVAVGFA----DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 + L K+SSL + +G +L G + +Q+ + IL+ YL +++ + L Sbjct: 211 LVLLFKDSSLVLFLGVTLEERELTKFGRDLASQSANSTP-ILVAGVCYLLVTVPLGL 266 >gi|323529853|ref|YP_004232005.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia sp. CCGE1001] gi|323386855|gb|ADX58945.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. CCGE1001] Length = 251 Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 48/147 (32%), Positives = 84/147 (57%), Gaps = 4/147 (2%) Query: 251 LGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306 +GQF I S + P ++ ++L+ TA + AEI+R GL+AVP GQ+EA ++GL+ Sbjct: 78 MGQFGVIRESFLWPVLREPYLCAVLSLALCTAGYTAEIIRGGLMAVPVGQIEAGYSIGLS 137 Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 R V+ P A+R +P +++ + L+K+++LA V ++ V II QT + E+ Sbjct: 138 GFALLRRVIGPIALRQCLPAYSTEAVLLVKSTALASLVTVWEVTGVAQQIIQQTYRTTEV 197 Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIA 393 + IYL L+ +I + L A+++ Sbjct: 198 FICAALIYLFLNFVIVRALGLLEARLS 224 >gi|227818417|ref|YP_002822388.1| ABC transporter permease [Sinorhizobium fredii NGR234] gi|227337416|gb|ACP21635.1| putative permease component of ABC transporter [Sinorhizobium fredii NGR234] Length = 234 Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 36/96 (37%), Positives = 61/96 (63%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P F+++ + L Y AF++E+VR G++A+ GQMEA+ ALG ++ A R V+LPQA+ ++ Sbjct: 97 PSFLTMLVTLVVYQGAFLSEVVRGGIVALGHGQMEASRALGHSYLGAMRYVILPQALYNV 156 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359 IP + S ++ +K+++L + DL I NQ Sbjct: 157 IPSIISVFVATIKDTTLGYVINVPDLTFAASQINNQ 192 >gi|227549082|ref|ZP_03979131.1| glutamate ABC superfamily ATP binding cassette transporter, permease protein [Corynebacterium lipophiloflavum DSM 44291] gi|227078864|gb|EEI16827.1| glutamate ABC superfamily ATP binding cassette transporter, permease protein [Corynebacterium lipophiloflavum DSM 44291] Length = 310 Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 47/142 (33%), Positives = 82/142 (57%), Gaps = 10/142 (7%) Query: 225 STFLIF--GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282 +TF+ F +P L+L+ YQ FN + ++ F ++ AL+ Y + IA Sbjct: 108 ATFIEFFRAIPVLLLMIFLYQF------FAVFNVVPPRGLA--FWAVVTALTLYNGSVIA 159 Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342 EI+R+G+ ++PRGQ EAA ALG+TH + +LLPQ++ +++P L +Q + LK+S+L Sbjct: 160 EILRAGIRSLPRGQTEAAHALGMTHWQTMWKILLPQSVAAMLPALIAQMVIALKDSALGY 219 Query: 343 AVGFADLVSVGGTIINQTGQAI 364 +G+ ++V G + + I Sbjct: 220 QIGYVEVVRSGTQVASSNSNYI 241 Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 32/96 (33%), Positives = 56/96 (58%), Gaps = 3/96 (3%) Query: 64 LSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK 123 L+E + ++ P+ + +++ T IL G T A ++ A I G ++G GRL+ K Sbjct: 43 LAENGQLDAEK-WTPFVNANTWTTYILPGLWGTIKAAALSILLALIFGVVLGLGRLAELK 101 Query: 124 LVAWICRVYVEVFRNIPPLVVIFFLYK--SVLSVLP 157 V W+C ++E FR IP L+++ FLY+ +V +V+P Sbjct: 102 AVRWLCATFIEFFRAIPVLLLMIFLYQFFAVFNVVP 137 >gi|222102265|ref|YP_002546855.1| ABC-type amino acid transport system, permease component [Agrobacterium radiobacter K84] gi|221728382|gb|ACM31391.1| ABC-type amino acid transport system, permease component [Agrobacterium radiobacter K84] Length = 356 Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 33/83 (39%), Positives = 62/83 (74%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I ++ + +A++AE++R+GL ++P GQ+EAA +LG + + T+LV+LPQA+R++IP + + Sbjct: 226 IGITLFVSAYLAEVIRAGLQSIPAGQLEAAYSLGFGYWRTTQLVVLPQALRAVIPAIVNL 285 Query: 331 YLNLLKNSSLAVAVGFADLVSVG 353 + +L N+SL +G +DL++ G Sbjct: 286 SIGILLNTSLLAVIGISDLLNTG 308 >gi|170758854|ref|YP_001786802.1| His/Glu/Gln/Arg/opine ABC transporter permease [Clostridium botulinum A3 str. Loch Maree] gi|169405843|gb|ACA54254.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Clostridium botulinum A3 str. Loch Maree] Length = 219 Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 40/124 (32%), Positives = 73/124 (58%), Gaps = 3/124 (2%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I L+ AA+++EI+R+ +I++ RGQ EA +LG T + ++LPQA++ +PPL + Sbjct: 94 IGLALNGAAYMSEIIRAAIISIDRGQEEAGFSLGYTRLQNLYYIILPQAVKISVPPLVNG 153 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL---FMNR 387 + +LLK++SL + +L G I ++T + E+ L Y L+ M+++ F+ + Sbjct: 154 FSSLLKDTSLVSVISITELTRSGNLIYSRTARPFEVYLTLGLFYFVLTYMVSICSKFIEK 213 Query: 388 LNAK 391 N K Sbjct: 214 RNEK 217 >gi|163841001|ref|YP_001625406.1| ABC transporter, nucleotide binding/ATPase protein [Renibacterium salmoninarum ATCC 33209] gi|162954477|gb|ABY23992.1| ABC transporter, nucleotide binding/ATPase protein [Renibacterium salmoninarum ATCC 33209] Length = 381 Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 62/194 (31%), Positives = 109/194 (56%), Gaps = 24/194 (12%) Query: 194 FVLGIVLSLFATRLSRHFHEKTGKALPLLYI----STFLIFGLPTLVLIALKYQLHF--D 247 FVLG +L+L R+S PLL+ T++ +P LV + L Y L + + Sbjct: 94 FVLGFLLALM--RISSS---------PLLWTVSWAYTWIFRSVPLLVQLLLWYNLGYLYE 142 Query: 248 KPVLGQ-----FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302 K LG F + +T+ +F + + L+ + AA+ AEI+R G+++V +GQ+EAA A Sbjct: 143 KIQLGVPFGPVFFEVQTTTLISQFAAAVLGLTLHQAAYSAEIIRGGILSVDQGQLEAAAA 202 Query: 303 LGLTH-RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361 LG+ R+A R+VL PQA+R+I+P ++ + L+K +S+ + +++L + N+T Sbjct: 203 LGIPRSRRALRIVL-PQALRAILPSAFNEIIGLVKGTSVVYVLAYSELFYTIQVVYNRTQ 261 Query: 362 QAIEIILIWMFIYL 375 Q I ++L+ Y+ Sbjct: 262 QVIPLLLVATLWYV 275 >gi|15802353|ref|NP_288379.1| putative transport system permease protein (former yecC) [Escherichia coli O157:H7 EDL933] gi|15831910|ref|NP_310683.1| transport system permease protein [Escherichia coli O157:H7 str. Sakai] gi|168751844|ref|ZP_02776866.1| L-cystine ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4113] gi|168758229|ref|ZP_02783236.1| L-cystine ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4401] gi|168764460|ref|ZP_02789467.1| L-cystine ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4501] gi|168771522|ref|ZP_02796529.1| L-cystine ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4486] gi|168777342|ref|ZP_02802349.1| L-cystine ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4196] gi|168783312|ref|ZP_02808319.1| L-cystine ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4076] gi|168790326|ref|ZP_02815333.1| L-cystine ABC transporter, permease protein [Escherichia coli O157:H7 str. EC869] gi|168802262|ref|ZP_02827269.1| L-cystine ABC transporter, permease protein [Escherichia coli O157:H7 str. EC508] gi|195939222|ref|ZP_03084604.1| putative transport system permease protein [Escherichia coli O157:H7 str. EC4024] gi|208810409|ref|ZP_03252285.1| L-cystine ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4206] gi|208816908|ref|ZP_03258028.1| L-cystine ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4045] gi|208819783|ref|ZP_03260103.1| L-cystine ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4042] gi|209397535|ref|YP_002271032.1| L-cystine ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4115] gi|217328790|ref|ZP_03444871.1| L-cystine ABC transporter, permease protein [Escherichia coli O157:H7 str. TW14588] gi|254793568|ref|YP_003078405.1| putative ABC transporter membrane protein [Escherichia coli O157:H7 str. TW14359] gi|261227587|ref|ZP_05941868.1| predicted transporter subunit: membrane component of ABC superfamily protein [Escherichia coli O157:H7 str. FRIK2000] gi|261255817|ref|ZP_05948350.1| predicted transporter subunit: membrane component of ABC superfamily protein [Escherichia coli O157:H7 str. FRIK966] gi|291283095|ref|YP_003499913.1| putative transport system permease protein [Escherichia coli O55:H7 str. CB9615] gi|12516016|gb|AAG56933.1|AE005414_10 putative transport system permease protein (former yecC) [Escherichia coli O157:H7 str. EDL933] gi|13362124|dbj|BAB36079.1| putative transport system permease protein [Escherichia coli O157:H7 str. Sakai] gi|187767392|gb|EDU31236.1| L-cystine ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4196] gi|188014175|gb|EDU52297.1| L-cystine ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4113] gi|188999304|gb|EDU68290.1| L-cystine ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4076] gi|189354909|gb|EDU73328.1| L-cystine ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4401] gi|189359723|gb|EDU78142.1| L-cystine ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4486] gi|189365552|gb|EDU83968.1| L-cystine ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4501] gi|189370189|gb|EDU88605.1| L-cystine ABC transporter, permease protein [Escherichia coli O157:H7 str. EC869] gi|189375708|gb|EDU94124.1| L-cystine ABC transporter, permease protein [Escherichia coli O157:H7 str. EC508] gi|208724925|gb|EDZ74632.1| L-cystine ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4206] gi|208731251|gb|EDZ79940.1| L-cystine ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4045] gi|208739906|gb|EDZ87588.1| L-cystine ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4042] gi|209158935|gb|ACI36368.1| L-cystine ABC transporter, permease protein [Escherichia coli O157:H7 str. EC4115] gi|209767008|gb|ACI81816.1| putative transport system permease protein [Escherichia coli] gi|209767010|gb|ACI81817.1| putative transport system permease protein [Escherichia coli] gi|209767012|gb|ACI81818.1| putative transport system permease protein [Escherichia coli] gi|209767014|gb|ACI81819.1| putative transport system permease protein [Escherichia coli] gi|209767016|gb|ACI81820.1| putative transport system permease protein [Escherichia coli] gi|217318137|gb|EEC26564.1| L-cystine ABC transporter, permease protein [Escherichia coli O157:H7 str. TW14588] gi|254592968|gb|ACT72329.1| predicted transporter subunit: membrane component of ABC superfamily [Escherichia coli O157:H7 str. TW14359] gi|290762968|gb|ADD56929.1| putative transport system permease protein [Escherichia coli O55:H7 str. CB9615] gi|320191893|gb|EFW66540.1| Cystine ABC transporter, permease protein [Escherichia coli O157:H7 str. EC1212] gi|320641766|gb|EFX11154.1| amino acid ABC transporter permease [Escherichia coli O157:H7 str. G5101] gi|320647126|gb|EFX15959.1| amino acid ABC transporter permease [Escherichia coli O157:H- str. 493-89] gi|320652409|gb|EFX20707.1| amino acid ABC transporter permease [Escherichia coli O157:H- str. H 2687] gi|320658011|gb|EFX25773.1| amino acid ABC transporter permease [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320658583|gb|EFX26277.1| amino acid ABC transporter permease [Escherichia coli O55:H7 str. USDA 5905] gi|320668481|gb|EFX35308.1| amino acid ABC transporter permease [Escherichia coli O157:H7 str. LSU-61] gi|326342326|gb|EGD66107.1| Cystine ABC transporter, permease protein [Escherichia coli O157:H7 str. 1044] gi|326344833|gb|EGD68580.1| Cystine ABC transporter, permease protein [Escherichia coli O157:H7 str. 1125] Length = 222 Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 62/207 (29%), Positives = 109/207 (52%), Gaps = 18/207 (8%) Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251 F +LG +L+L RLS + + L YIS F G P LIA + +++ P Sbjct: 32 FGLLLGFILALM--RLSPIWPVRW---LARFYISIFR--GTP---LIAQLFMIYYGLP-- 79 Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311 QF G + P S I LS TAA+ AE +R+ + ++ +GQ EAA ++G+T + Sbjct: 80 -QF----GIELDP-IPSAMIGLSLNTAAYTAETLRAAISSIDKGQWEAAASIGMTPWQTM 133 Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371 R +LPQA R +PPL++ +++L+K++SLA + +L I ++T + + L Sbjct: 134 RRAILPQAARVALPPLSNSFISLVKDTSLAATIQVPELFRQAQLITSRTLEVFTMYLAAS 193 Query: 372 FIYLSLSIMIALFMNRLNAKIALKEKK 398 IY ++ +++ N ++ +E++ Sbjct: 194 LIYWIMATVLSTLQNHFENQLNRQERE 220 Score = 37.0 bits (84), Expect = 5.5, Method: Compositional matrix adjust. Identities = 28/97 (28%), Positives = 45/97 (46%), Gaps = 8/97 (8%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G T L+ GM ++G ++ RLS V W+ R Y+ +FR P + +F + Sbjct: 15 LLKGAGYTLQLSIGGMFFGLLLGFILALMRLSPIWPVRWLARFYISIFRGTPLIAQLFMI 74 Query: 149 YKSV----LSVLPIPDHSIVLPFGMFLNNRGLSFPTL 181 Y + + + PIP I G+ LN + TL Sbjct: 75 YYGLPQFGIELDPIPSAMI----GLSLNTAAYTAETL 107 >gi|325695641|gb|EGD37541.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK150] Length = 521 Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 40/106 (37%), Positives = 65/106 (61%) Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 +S T A+++EIVR G+ AV +GQ EAA ALG+TH + R ++LPQ +R+I+P ++++ Sbjct: 383 VSINTGAYMSEIVRGGIFAVDKGQFEAATALGMTHSQTMRKIVLPQVVRNILPATGNEFV 442 Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378 +K++S+ + +L G TI QT Q + I IY L+ Sbjct: 443 INIKDTSVLNVISVVELYFSGNTIATQTYQYFQTFTIIAVIYFVLT 488 Score = 37.7 bits (86), Expect = 3.0, Method: Compositional matrix adjust. Identities = 28/88 (31%), Positives = 40/88 (45%), Gaps = 11/88 (12%) Query: 96 TFWLAFSGMIPATIIGTLVGAGRL---SANKLVA-------WICRVYVEVFRNIPPLVVI 145 T ++ +G I IIG L+G R S NKL+A W VY+E+FR P +V Sbjct: 299 TLLISITGTIAGLIIGLLIGVYRTAPASKNKLLASLQKIFGWFLNVYIEIFRGTPMIVQS 358 Query: 146 FFLYKSVLSVLPIP-DHSIVLPFGMFLN 172 +Y I D +I F + +N Sbjct: 359 MVIYYGTAQAFGISIDRTIAAIFIVSIN 386 >gi|228996156|ref|ZP_04155807.1| Amino acid ABC transporter [Bacillus mycoides Rock3-17] gi|228763606|gb|EEM12502.1| Amino acid ABC transporter [Bacillus mycoides Rock3-17] Length = 226 Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 49/157 (31%), Positives = 94/157 (59%), Gaps = 14/157 (8%) Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244 T + + +FV+GI+L++F T L+R + + + +Y+S +I G P LV + + + Sbjct: 27 TTIPLTIITFVIGIILAIF-TALARISSSRLLQWIARIYVS--IIRGTPLLVQL---FII 80 Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304 + P L + P + + I S A+ +EI+R+ ++++P+GQ EAA +G Sbjct: 81 FYGLPTLN-------IEIDP-YPAAIIGFSLNVGAYASEIIRASILSIPKGQWEAAYTIG 132 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341 +T+ +A + ++LPQA R IPPL++ +++L+K++SLA Sbjct: 133 MTYPQALKRIILPQATRVSIPPLSNTFISLVKDTSLA 169 Score = 37.7 bits (86), Expect = 2.9, Method: Compositional matrix adjust. Identities = 19/53 (35%), Positives = 31/53 (58%), Gaps = 8/53 (15%) Query: 105 IPATIIGTLVGA--------GRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 IP TII ++G R+S+++L+ WI R+YV + R P LV +F ++ Sbjct: 29 IPLTIITFVIGIILAIFTALARISSSRLLQWIARIYVSIIRGTPLLVQLFIIF 81 >gi|172040836|ref|YP_001800550.1| putative ABC transport system, permease protein [Corynebacterium urealyticum DSM 7109] gi|171852140|emb|CAQ05116.1| putative ABC transport system, permease protein [Corynebacterium urealyticum DSM 7109] Length = 325 Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 44/106 (41%), Positives = 66/106 (62%), Gaps = 1/106 (0%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I L AA++AEIVR+G+ AVP GQ EA+ ALG+T + R +LPQAMR IIPP ++ Sbjct: 163 IGLGLNEAAYMAEIVRAGIQAVPEGQSEASKALGMTWWQNMRRTVLPQAMRIIIPPTGNE 222 Query: 331 YLNLLKNSSLAVAVGFA-DLVSVGGTIINQTGQAIEIILIWMFIYL 375 +++LK +SL + V ++ +L I N Q + ++L+ YL Sbjct: 223 LISMLKTTSLVIVVPYSGELFGKATDISNSIFQPVPLLLVAASWYL 268 >gi|256380966|ref|YP_003104626.1| polar amino acid ABC transporter, inner membrane subunit [Actinosynnema mirum DSM 43827] gi|255925269|gb|ACU40780.1| polar amino acid ABC transporter, inner membrane subunit [Actinosynnema mirum DSM 43827] Length = 278 Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 40/94 (42%), Positives = 63/94 (67%), Gaps = 4/94 (4%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IAL AA+IAE +R+G+ AVP+GQ+EAA +LG++ + T V++PQA R I+PPLT++ Sbjct: 133 IALGVVGAAYIAETIRAGIKAVPKGQLEAARSLGMSQGRTTVTVVIPQAFRIILPPLTNE 192 Query: 331 YLNLLKNSSLAVAVGF----ADLVSVGGTIINQT 360 + L K+SSL +G +L G +++Q+ Sbjct: 193 LIMLTKDSSLISIIGLIATQRELTKYGREVLSQS 226 >gi|225019854|ref|ZP_03709046.1| hypothetical protein CLOSTMETH_03808 [Clostridium methylpentosum DSM 5476] gi|224947414|gb|EEG28623.1| hypothetical protein CLOSTMETH_03808 [Clostridium methylpentosum DSM 5476] Length = 220 Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 52/171 (30%), Positives = 92/171 (53%), Gaps = 6/171 (3%) Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286 +++ G P L+ + + PV+G FI S F S +A +A+ AEI R Sbjct: 55 YVVRGTPLLLQLLFFCFGLYYLPVIGPAIFI-----SNRFASATVAFIINYSAYFAEIFR 109 Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346 GL+AV +GQ EAA LGL + +++PQ +R +P L+++ + L+K+++L +VG Sbjct: 110 GGLLAVDKGQYEAAQVLGLRRGQTMFRIIIPQMVRVCMPTLSNEAVTLVKDTALLYSVGV 169 Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 ++++ TI+N T I I IYL L+ +++ + R+ K++ E Sbjct: 170 VEILTQAKTIVNGTYN-ISAYFIAAIIYLILNTILSFGLKRIEKKLSFGED 219 >gi|187779934|ref|ZP_02996407.1| hypothetical protein CLOSPO_03530 [Clostridium sporogenes ATCC 15579] gi|187773559|gb|EDU37361.1| hypothetical protein CLOSPO_03530 [Clostridium sporogenes ATCC 15579] Length = 219 Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 59/208 (28%), Positives = 110/208 (52%), Gaps = 18/208 (8%) Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF-GLPTLVLIALKYQLHF 246 KI + SF++ I+L+ L + K K L L+ + IF G P L+ + + +++ Sbjct: 24 KITLLSFIVAIILAFIVGVLRTY---KFSKILDLILNAYVEIFRGSPLLIQL---FFIYY 77 Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306 P +G + E ++ I L+ AA+++EI+R+ ++++ RGQ EA +LG T Sbjct: 78 GLPSVG-------IAMDAEVAAV-IGLALNGAAYMSEIIRAAILSIDRGQEEAGFSLGYT 129 Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 + R ++LPQA + +PPL + + +LLK++SL + +L G I ++T + E+ Sbjct: 130 RFQNLRYIILPQAAQISVPPLVNGFSSLLKDTSLVSVISITELTRSGNLIYSRTARPFEV 189 Query: 367 ILIWMFIYLSLSIMIAL---FMNRLNAK 391 L Y L+ +++L F+ + N K Sbjct: 190 YLTLGLFYFVLTYIVSLCSKFIEKRNEK 217 >gi|149204304|ref|ZP_01881271.1| glutamate/aspartate ABC transporter, permease protein [Roseovarius sp. TM1035] gi|149142189|gb|EDM30236.1| glutamate/aspartate ABC transporter, permease protein [Roseovarius sp. TM1035] Length = 218 Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 42/127 (33%), Positives = 73/127 (57%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F S IA + AA+ +EI+R+G+ +V GQ+ A A GL + + R ++LPQA R++IP Sbjct: 90 FYSALIAFVMFEAAYYSEIMRAGIQSVRTGQVHAGQATGLGYWQIQRYIVLPQAFRNMIP 149 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 L +Q + L +++SL V DL++ + G+ +E+ L +Y + +LF+ Sbjct: 150 ILVTQGIILFQDTSLVFVVSLRDLMTASSIVARTEGRLVEMYLFAALVYFVICFSGSLFV 209 Query: 386 NRLNAKI 392 RL A++ Sbjct: 210 RRLQARM 216 Score = 38.1 bits (87), Expect = 2.7, Method: Compositional matrix adjust. Identities = 20/58 (34%), Positives = 32/58 (55%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 G + WL F ++ +GTL+ RLS K +A YV + R++P ++VIF+ Y Sbjct: 19 GLQLSLWLTFLAVLGGIALGTLLALARLSGIKPLAIFAAAYVNLIRSVPLILVIFWFY 76 >gi|121593168|ref|YP_985064.1| polar amino acid ABC transporter inner membrane subunit [Acidovorax sp. JS42] gi|120605248|gb|ABM40988.1| amino acid ABC transporter membrane protein, PAAT family [Acidovorax sp. JS42] Length = 217 Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 42/130 (32%), Positives = 76/130 (58%), Gaps = 1/130 (0%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P+F + A + AA+ AEI R+G+ +V RGQ EAA LG+++ + R ++LPQ +RSI Sbjct: 85 PDFPAAVAAFALNYAAYFAEIFRAGIQSVDRGQYEAAKVLGMSYGQTMRRIVLPQMVRSI 144 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 +PP++++ + L+K++SL + DL+ I+ + I+ F YL +++++ Sbjct: 145 LPPMSNETITLVKDTSLIYVLALNDLLRAARGIVQRDFTTTPFIVAAAF-YLVMTLVLTW 203 Query: 384 FMNRLNAKIA 393 RL + A Sbjct: 204 GFQRLEKRYA 213 >gi|307710415|ref|ZP_07646854.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus mitis SK564] gi|307618827|gb|EFN97964.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus mitis SK564] Length = 521 Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 39/109 (35%), Positives = 66/109 (60%) Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 +S T A++ EIVR G++AV +GQ EAA ALG+TH + R ++LPQ +R+I+P ++++ Sbjct: 384 VSINTGAYMTEIVRGGILAVDKGQFEAATALGMTHNQTMRKIVLPQVVRNILPATGNEFV 443 Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 +K++S+ + +L G T+ QT Q + I IY L+ + Sbjct: 444 INIKDTSVLNVISVVELYFSGNTVATQTYQYFQTFTIIAVIYFVLTFTV 492 >gi|302337441|ref|YP_003802647.1| polar amino acid ABC transporter inner membrane subunit [Spirochaeta smaragdinae DSM 11293] gi|301634626|gb|ADK80053.1| polar amino acid ABC transporter, inner membrane subunit [Spirochaeta smaragdinae DSM 11293] Length = 212 Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 48/145 (33%), Positives = 84/145 (57%), Gaps = 11/145 (7%) Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315 F GS VSP ++ + LS Y A+IAEIVR+G+ A+P+GQ E A ++GL+ V+ Sbjct: 71 FFSGSFVSP-IVTAIVVLSVYHGAYIAEIVRAGISAIPKGQHEGADSIGLSVIAKMVHVI 129 Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375 +PQ SIIP L QY+ L+K+++L A+G +L +N Q ++++ + +Y+ Sbjct: 130 MPQVWLSIIPSLVGQYIILIKDTTLISAIGVMEL-------LNNARQIMQVVYRPITVYV 182 Query: 376 SLSI---MIALFMNRLNAKIALKEK 397 +++ +I F+ L+ + + K Sbjct: 183 IVAVFFFVICFFLENLSKHLERRIK 207 >gi|270293390|ref|ZP_06199599.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus sp. M143] gi|270278239|gb|EFA24087.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus sp. M143] Length = 520 Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 40/109 (36%), Positives = 66/109 (60%) Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 +S T A++ EIVR G++AV +GQ EAA ALG+TH + R V+LPQ +R+I+P ++++ Sbjct: 383 VSINTGAYMTEIVRGGILAVDKGQFEAATALGMTHNQTMRKVVLPQVVRNILPATGNEFV 442 Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 +K++S+ + +L G T+ QT Q + I IY L+ + Sbjct: 443 INIKDTSVLNVISVVELYFSGNTVATQTYQYFQTFTIIAVIYFVLTFTV 491 >gi|255528435|ref|ZP_05395231.1| polar amino acid ABC transporter, inner membrane subunit [Clostridium carboxidivorans P7] gi|296188320|ref|ZP_06856712.1| putative ectoine/hydroxyectoine ABC transporter, permease protein EhuC [Clostridium carboxidivorans P7] gi|255507869|gb|EET84313.1| polar amino acid ABC transporter, inner membrane subunit [Clostridium carboxidivorans P7] gi|296047446|gb|EFG86888.1| putative ectoine/hydroxyectoine ABC transporter, permease protein EhuC [Clostridium carboxidivorans P7] Length = 215 Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 56/204 (27%), Positives = 96/204 (47%), Gaps = 30/204 (14%) Query: 181 LTMDTNAKIFVFSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIFGLPT 234 +T++ V +LG+ L+L R+ F+ + PLL F +GLP Sbjct: 19 MTIELTVIALVVGTILGVFLALLKLSKNVVFRIISSFYTWIFRGTPLLLQLFFFYYGLPF 78 Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294 + G ++P F + I LS A++AEI+R G+ ++ + Sbjct: 79 M-----------------------GVELTP-FSAAAIGLSLNCGAYMAEIIRGGIQSIDK 114 Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354 GQ EAA ALG T+ + ++LPQ + IIPP+ ++++ LLK++SL + +L+ Sbjct: 115 GQFEAAKALGFTYADTMKKIILPQTFKVIIPPVGNEFIALLKDTSLVSTIAMVELMRSAQ 174 Query: 355 TIINQTGQAIEIILIWMFIYLSLS 378 I T + IE+ +YL L+ Sbjct: 175 QIYASTFRPIEVFFTAGILYLLLT 198 >gi|120555956|ref|YP_960307.1| polar amino acid ABC transporter, inner membrane subunit [Marinobacter aquaeolei VT8] gi|120325805|gb|ABM20120.1| amino acid ABC transporter membrane protein, PAAT family [Marinobacter aquaeolei VT8] Length = 237 Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 54/192 (28%), Positives = 93/192 (48%), Gaps = 29/192 (15%) Query: 193 SFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246 FVLGIV L + R + + + P+L F+ +GLP LV Sbjct: 51 GFVLGIVFGLLSINKNWFLRWPATAYIEIFRGTPILVQVLFIFYGLPDLV---------- 100 Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306 G + P + A++ + A+I+E+VR G+ ++ +GQ EA ++LGL+ Sbjct: 101 ------------GGPIDP-LTAGIAAIALNSGAYISEVVRGGVQSIDKGQTEAGLSLGLS 147 Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 + ++ PQA R +IPPL +Q + +K++SL +G +LV G I T A E+ Sbjct: 148 RSQTFWNIVWPQAFRRMIPPLGNQAIVSIKDTSLFSVIGVGELVRQGQVYIANTFTAFEV 207 Query: 367 ILIWMFIYLSLS 378 + +YL+++ Sbjct: 208 YFVVAIMYLAIT 219 >gi|330505510|ref|YP_004382379.1| polar amino acid ABC transporter inner membrane subunit [Pseudomonas mendocina NK-01] gi|328919796|gb|AEB60627.1| polar amino acid ABC transporter, inner membrane subunit [Pseudomonas mendocina NK-01] Length = 229 Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 63/204 (30%), Positives = 110/204 (53%), Gaps = 18/204 (8%) Query: 188 KIFVFSFVLGIVLSLFA--TRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH 245 ++ + + G++L+L R S+H++ + ALP YI F G P LV + L Y Sbjct: 22 ELLAVAVIAGLILALPMGIARASKHWYVR---ALPYGYI--FFFRGTPMLVQLFLIYY-- 74 Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLY----IALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301 L QF+ + S P Y + ++ +TAA+IAEI+R + AVP G++EAA Sbjct: 75 ----GLAQFDAVRQSVFWPYLRDPYWCAVLTMTLHTAAYIAEILRGAIQAVPPGEIEAAR 130 Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361 ALG++ +A ++LP+A R +P +++ + +LK S+LA V +L + T+ +T Sbjct: 131 ALGMSRAQAMLHIILPRAARIGLPAYSNEVILMLKASALASTVTLLELTGMARTLNARTY 190 Query: 362 QAIEIILIWMFIYLSLS-IMIALF 384 ++E YL+++ ++I LF Sbjct: 191 VSMEFFFTAALFYLAITFVLINLF 214 >gi|296329884|ref|ZP_06872368.1| putative ABC transporter (permease) [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305676610|ref|YP_003868282.1| putative ABC transporter permease [Bacillus subtilis subsp. spizizenii str. W23] gi|296152923|gb|EFG93788.1| putative ABC transporter (permease) [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305414854|gb|ADM39973.1| putative ABC transporter (permease) [Bacillus subtilis subsp. spizizenii str. W23] Length = 224 Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 65/217 (29%), Positives = 109/217 (50%), Gaps = 23/217 (10%) Query: 177 SFPTLTMDTNAKIF------VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230 +FPTL +F VF+ + G++L+L H+ L LYIS F Sbjct: 12 AFPTLIQALPITLFMAIAAMVFAIIGGLILALITKNKIPVLHQ-----LSKLYISFFR-- 64 Query: 231 GLPTLV-LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289 G+PTLV L + Y L P + + + + I LS AA++AEI R+ L Sbjct: 65 GVPTLVQLFLIYYGLPQLFPEMSKMTALTAAI---------IGLSLKNAAYLAEIFRAAL 115 Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349 +V GQ+EA +++G+T +A R ++LPQA+R+ IP + ++ LLK +SLA +G ++ Sbjct: 116 NSVDDGQLEACLSVGMTKLQAYRRIILPQAIRNAIPATGNTFIGLLKETSLAFTLGVMEM 175 Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386 + G + + E L +Y L+I+ ++ + Sbjct: 176 FAQGKMYASGNLKYFETYLAVAIVYWVLTIIYSILQD 212 >gi|169630135|ref|YP_001703784.1| putative glutamate ABC transporter, permease [Mycobacterium abscessus ATCC 19977] gi|169242102|emb|CAM63130.1| Putative glutamate ABC transporter, permease [Mycobacterium abscessus] Length = 227 Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 49/126 (38%), Positives = 72/126 (57%), Gaps = 5/126 (3%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + S YTA F+ E +RSG VP GQ EAA +LGL + L++LPQAMRS++ P+ S Sbjct: 101 LGFSLYTATFVCETLRSGFNTVPLGQAEAARSLGLPFWRVLTLIVLPQAMRSVLAPMGSV 160 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQ-TGQAIEIILI----WMFIYLSLSIMIALFM 385 + L+KN+S+A A+G A+ + + I Q + I LI +M I L++ + F Sbjct: 161 LIALVKNTSIASAIGVAEAALLMRSEIELFADQIVWIFLIIAAGYMVITLTIGLSFGYFA 220 Query: 386 NRLNAK 391 RL K Sbjct: 221 KRLAVK 226 >gi|326333231|ref|ZP_08199478.1| glutamate permease [Nocardioidaceae bacterium Broad-1] gi|325948875|gb|EGD40968.1| glutamate permease [Nocardioidaceae bacterium Broad-1] Length = 295 Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 39/126 (30%), Positives = 78/126 (61%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F ++ + L Y + +AE++R+G+ A+P+GQ EA +A+GL+ + R +LLPQA+RS++P Sbjct: 138 FWAVVLGLMLYNGSVLAEVIRAGVNALPKGQSEAGVAIGLSPGQVMRTILLPQAVRSMLP 197 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 + +Q + LLK+++L + + +L++ I I ++ IY+S++ ++ L Sbjct: 198 AIIAQLVVLLKDTALGYILAYDELLNQINKIEGNYDNLIPAAIVVALIYISINTILGLVA 257 Query: 386 NRLNAK 391 N + A+ Sbjct: 258 NFVEAR 263 >gi|323495727|ref|ZP_08100797.1| ABC transporter ATP-binding/permease protein [Vibrio sinaloensis DSM 21326] gi|323319194|gb|EGA72135.1| ABC transporter ATP-binding/permease protein [Vibrio sinaloensis DSM 21326] Length = 265 Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 64/188 (34%), Positives = 94/188 (50%), Gaps = 15/188 (7%) Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247 KI V S + + L T L + + G+A+ YI LI P LV I L Y + Sbjct: 69 KISVISLAFTLAIGL-TTALLKLSNSIIGRAIANTYIE--LIRNTPLLVQIYLLYFVF-- 123 Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307 PV+G F + +ALS + A+ AEI R GL ++ +GQ EAA +LGL Sbjct: 124 GPVIGL----------DRFSTAVLALSLFQGAYTAEIFRGGLNSIDKGQFEAAKSLGLNR 173 Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367 V+LPQ ++ +PPLT++ ++L+KNSS+ + DL + G I+ +T EI Sbjct: 174 FFTYYDVILPQLIQRTLPPLTNEVVSLVKNSSIVSVMAIFDLTTEGRNIVAETAMPFEIW 233 Query: 368 LIWMFIYL 375 IYL Sbjct: 234 FTVAAIYL 241 >gi|293605796|ref|ZP_06688169.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Achromobacter piechaudii ATCC 43553] gi|292815791|gb|EFF74899.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Achromobacter piechaudii ATCC 43553] Length = 229 Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 47/128 (36%), Positives = 76/128 (59%), Gaps = 10/128 (7%) Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290 G+P L+LI Y F P L G +S F +L AL Y +A+++E++RSG+ Sbjct: 70 GMPLLMLIFWAY---FVVPKLT------GQVIS-GFWTLIFALVVYESAYLSEVIRSGIE 119 Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 AVPRGQ+EA+ +LG+ + R V+LPQA+ +++P +TSQ+++ +K +SL + +L Sbjct: 120 AVPRGQIEASRSLGVGYWTTMRKVVLPQALFNVLPSMTSQFVSTIKETSLGYVISVNELT 179 Query: 351 SVGGTIIN 358 I N Sbjct: 180 FAANQINN 187 >gi|227891736|ref|ZP_04009541.1| glutamine-binding protein / glutamine transport system permease protein [Lactobacillus salivarius ATCC 11741] gi|227866461|gb|EEJ73882.1| glutamine-binding protein / glutamine transport system permease protein [Lactobacillus salivarius ATCC 11741] Length = 485 Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 49/176 (27%), Positives = 88/176 (50%), Gaps = 23/176 (13%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 + LPLL ++ F+ G+P+L T P F++ I L+ Sbjct: 331 RGLPLLVLALFIYNGIPSLT-----------------------GTKIPAFIAGIITLTLN 367 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 A+ A V+ G+ AV +GQMEAA +LGL+ KA + ++LPQ ++ ++P +Q++ LK Sbjct: 368 EGAYTAAFVKGGIEAVDKGQMEAARSLGLSFGKAMKKIILPQGIKIMVPSFVNQFIITLK 427 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 ++S+ +G +L G II + + ++ I +YL + ++ N L K+ Sbjct: 428 DTSILSIIGILELTQTGKIIIARNLEGFKVWAIIGLMYLIVITVLTWISNYLQKKM 483 Score = 36.6 bits (83), Expect = 7.4, Method: Compositional matrix adjust. Identities = 21/66 (31%), Positives = 34/66 (51%) Query: 90 LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 L G T +L G+I ATI G ++G + NK + + +FR +P LV+ F+Y Sbjct: 284 LNGLWKTIYLTILGIIGATIFGIIIGFLGVIPNKFAQGVSTTVIYIFRGLPLLVLALFIY 343 Query: 150 KSVLSV 155 + S+ Sbjct: 344 NGIPSL 349 >gi|237730788|ref|ZP_04561269.1| glutamine ABC transporter permease [Citrobacter sp. 30_2] gi|226906327|gb|EEH92245.1| glutamine ABC transporter permease [Citrobacter sp. 30_2] Length = 219 Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 61/212 (28%), Positives = 113/212 (53%), Gaps = 14/212 (6%) Query: 186 NAKIFVFSFVLGIVLSL---FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY 242 AK+ ++ VLG+ L A +R F + L++I +I G P +V + Y Sbjct: 18 GAKMTLWISVLGLAGGLIIGLAAGFARTFGGWIANHVALVFIE--VIRGTPIVVQVMFIY 75 Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302 F P+ FN + + P F + + + + A+IAEI R ++++ +G EA +A Sbjct: 76 ---FALPM--AFNDL---RIDP-FSAAVVTIMINSGAYIAEITRGAVLSIHKGFSEAGLA 126 Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362 LGL+ + R V+LP A+R ++PPL +Q++ +K++SL + +G A+L G II + Sbjct: 127 LGLSRTETIRHVILPLALRRMLPPLGNQWIISIKDTSLFIVIGVAELTRQGQEIIAGNFR 186 Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394 A+EI YL ++++++ + RL ++ + Sbjct: 187 ALEIWSAVAVFYLIITLVLSFILRRLERRMKI 218 >gi|225858303|ref|YP_002739813.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae 70585] gi|225720142|gb|ACO15996.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae 70585] Length = 521 Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 39/109 (35%), Positives = 66/109 (60%) Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 +S T A++ EIVR G++AV +GQ EAA ALG+TH + R ++LPQ +R+I+P ++++ Sbjct: 384 VSINTGAYMTEIVRGGILAVDKGQFEAATALGMTHNQTMRKIVLPQVVRNILPATGNEFV 443 Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 +K++S+ + +L G T+ QT Q + I IY L+ + Sbjct: 444 INIKDTSVLNVISVVELYFSGNTVATQTYQYFQTFTIIAVIYFVLTFTV 492 >gi|222109927|ref|YP_002552191.1| polar amino acid ABC transporter inner membrane subunit [Acidovorax ebreus TPSY] gi|221729371|gb|ACM32191.1| polar amino acid ABC transporter, inner membrane subunit [Acidovorax ebreus TPSY] Length = 217 Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 60/222 (27%), Positives = 107/222 (48%), Gaps = 32/222 (14%) Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTG--------KALPLLYISTFLIFG 231 +T+ A V + LG+VL+L R+SR + PL+ F+ F Sbjct: 16 AVTLKLFAITLVLAVPLGLVLAL--ARVSRFAPLSAAVNGYIWLMRGTPLMLQMLFIYFA 73 Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291 LP + +I ++ P+F + A + AA+ AEI R+G+ + Sbjct: 74 LPFVPVIGVRL---------------------PDFPAAVAAFALNYAAYFAEIFRAGIQS 112 Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 V RGQ EAA LG+++ + R ++LPQ +RSI+PP++++ + L+K++SL + DL+ Sbjct: 113 VDRGQYEAAKVLGMSYGQTMRRIVLPQMVRSILPPMSNETITLVKDTSLIYVLALNDLLR 172 Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393 I+ + I+ F YL +++++ RL + A Sbjct: 173 AARGIVQRDFTTTPFIVAAAF-YLVMTLVLTWGFQRLEKRYA 213 >gi|308178203|ref|YP_003917609.1| polar amino acid ABC transporter inner membrane subunit [Arthrobacter arilaitensis Re117] gi|307745666|emb|CBT76638.1| polar amino acid ABC transporter, inner membrane subunit [Arthrobacter arilaitensis Re117] Length = 263 Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 44/135 (32%), Positives = 80/135 (59%), Gaps = 4/135 (2%) Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320 T P+ +++ AL +AA+IAE +R+GL AVP+GQ EAA +LG+ +A +++PQA Sbjct: 123 TQWPQSVNVMCALGLVSAAYIAETLRAGLQAVPKGQTEAARSLGMPAWRAMVTIVIPQAF 182 Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFA----DLVSVGGTIINQTGQAIEIILIWMFIYLS 376 R ++PP+T++ + L K++SLA +G ++ G I Q I +++ YL Sbjct: 183 RIVLPPMTNEIILLTKDTSLAFILGATIAQYEMTKFGRDGITQLDAGITPLVVAGLFYLV 242 Query: 377 LSIMIALFMNRLNAK 391 ++I ++L + ++ Sbjct: 243 ITIPLSLVARKFESR 257 >gi|307711328|ref|ZP_07647748.1| bacterial extracellular solute-binding protein, family 3 [Streptococcus mitis SK321] gi|307616844|gb|EFN96024.1| bacterial extracellular solute-binding protein, family 3 [Streptococcus mitis SK321] Length = 521 Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 39/109 (35%), Positives = 66/109 (60%) Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 +S T A++ EIVR G++AV +GQ EAA ALG+TH + R ++LPQ +R+I+P ++++ Sbjct: 384 VSINTGAYMTEIVRGGILAVDKGQFEAATALGMTHNQTMRKIVLPQVVRNILPATGNEFV 443 Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 +K++S+ + +L G T+ QT Q + I IY L+ + Sbjct: 444 INIKDTSVLNVISVVELYFSGNTVATQTYQYFQTFTIIAVIYFVLTFTV 492 >gi|229159505|ref|ZP_04287521.1| Amino acid ABC transproter, permease [Bacillus cereus R309803] gi|228623962|gb|EEK80772.1| Amino acid ABC transproter, permease [Bacillus cereus R309803] Length = 230 Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 73/223 (32%), Positives = 117/223 (52%), Gaps = 19/223 (8%) Query: 177 SFPTLTMDT--NAKIFVFSFVLGIVLSL-FATRLSRHFHEKTGKALPLLYISTFLIFGLP 233 ++PTL T ++ + S VLG ++ L FA R + K ++ +YI+ +I G P Sbjct: 8 TYPTLLKATVVTLQLTLTSLVLGSLIGLLFA--FFRISNNKILNSIAHVYIA--IIRGTP 63 Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293 +V IA+ Y F +P F + IAL+ + A+I EI R + +V Sbjct: 64 LIVQIAILY-----------FGITSVIVFTP-FWAGAIALAIHNGAYITEIFRGSIQSVD 111 Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353 RGQ+EAA +LG+ + A R ++LPQA R +PPL +Q++ LK+SSL VG ++L G Sbjct: 112 RGQLEAARSLGMPYPLAMRRIILPQAFRLSLPPLGNQFIIGLKDSSLVAYVGLSELWGSG 171 Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 +I Q ++ +I YL L ++ F+N L ++ KE Sbjct: 172 LSIAAGNFQQLDTYVIVGLYYLVLVLLFTYFVNLLEKRLQRKE 214 Score = 37.0 bits (84), Expect = 5.2, Method: Compositional matrix adjust. Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 1/74 (1%) Query: 83 SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142 S+Y T +L V T L + ++ ++IG L R+S NK++ I VY+ + R P + Sbjct: 7 STYPT-LLKATVVTLQLTLTSLVLGSLIGLLFAFFRISNNKILNSIAHVYIAIIRGTPLI 65 Query: 143 VVIFFLYKSVLSVL 156 V I LY + SV+ Sbjct: 66 VQIAILYFGITSVI 79 >gi|227819410|ref|YP_002823381.1| ABC transporter permease [Sinorhizobium fredii NGR234] gi|227338409|gb|ACP22628.1| putative permease component of ABC transporter [Sinorhizobium fredii NGR234] Length = 224 Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 54/173 (31%), Positives = 95/173 (54%), Gaps = 13/173 (7%) Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281 LY++ +I P LVL+ Y F P LG +G + S + L+ Y+ A++ Sbjct: 63 LYVT--IIRNTPILVLVLFSY---FALPELGVR--LG------KIESFVLTLAIYSGAYL 109 Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341 AE+ R GLIAVP GQ EA +A+GLT + +++P +R+++P L S ++L K++SLA Sbjct: 110 AEVFRGGLIAVPPGQREAGLAIGLTEMQIRTSIIIPLMLRNVLPSLGSTMISLFKDTSLA 169 Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394 A+ +L I +T + IE ++ +Y++ ++A M + ++A+ Sbjct: 170 AAIAVPELTFEARKINVETFRVIETWIVASCLYVATCSLLAALMRAVERRLAV 222 >gi|91225416|ref|ZP_01260538.1| amino acid ABC transporter, permease protein [Vibrio alginolyticus 12G01] gi|91189779|gb|EAS76052.1| amino acid ABC transporter, permease protein [Vibrio alginolyticus 12G01] Length = 306 Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 50/160 (31%), Positives = 84/160 (52%), Gaps = 1/160 (0%) Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291 +P L L L + + L +F F G S + S + + ++A+IAE+VR GL + Sbjct: 142 IPLLGLEDLLRNYNGEPNALQRFLF-GPSNLWENLASGVLCVGLLSSAYIAEVVRGGLQS 200 Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 + +GQ EAA +LGL+ R V+ PQ ++SI P L Q ++L+K++S+ + ++ Sbjct: 201 IDQGQWEAADSLGLSRWVKYRFVIAPQVLKSITPALAGQTISLVKDTSIVSLISIQEMTF 260 Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 VG + N +G EI LI Y + ++L + AK Sbjct: 261 VGTEMANSSGYIFEIWLIVGLAYFLICFGLSLIFRHIEAK 300 >gi|288960700|ref|YP_003451040.1| polar amino acid transport system permease protein [Azospirillum sp. B510] gi|288913008|dbj|BAI74496.1| polar amino acid transport system permease protein [Azospirillum sp. B510] Length = 219 Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 46/135 (34%), Positives = 77/135 (57%), Gaps = 1/135 (0%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G +SP ++ +I L+ Y A+F EI+R G+I+V GQ +A ALG+ + V+LPQ Sbjct: 85 GIELSPS-VAAFITLTLYGASFFGEIIRGGIISVDMGQWDAGRALGMRRHQLMGGVILPQ 143 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378 A R ++PPL +Q + LKN+SL + DL+ G I + + + +E + IY + Sbjct: 144 AFRRMVPPLVNQTVLQLKNTSLLSVLAVPDLLYQGQLITSASYRPLETYTMIAVIYFIIL 203 Query: 379 IMIALFMNRLNAKIA 393 + F +RL A+++ Sbjct: 204 FPLTRFAHRLEARMS 218 >gi|225856181|ref|YP_002737692.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae P1031] gi|225725803|gb|ACO21655.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae P1031] Length = 521 Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 39/109 (35%), Positives = 66/109 (60%) Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 +S T A++ EIVR G++AV +GQ EAA ALG+TH + R ++LPQ +R+I+P ++++ Sbjct: 384 VSINTGAYMTEIVRGGILAVDKGQFEAATALGMTHNQTMRKIVLPQVVRNILPATGNEFV 443 Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 +K++S+ + +L G T+ QT Q + I IY L+ + Sbjct: 444 INIKDTSVLNVISVVELYFSGNTVATQTYQYFQTFTIIAVIYFVLTFTV 492 >gi|124027569|ref|YP_001012889.1| glutamine transport system permease protein glnP [Hyperthermus butylicus DSM 5456] gi|123978263|gb|ABM80544.1| glutamine transport system permease protein glnP [Hyperthermus butylicus DSM 5456] Length = 233 Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 46/118 (38%), Positives = 73/118 (61%) Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 +AA+ +E +R+ L AV GQ EAA+ALG+T +A ++LP +R+ IP LT++ + LLK Sbjct: 104 SAAYQSEYLRASLRAVHTGQWEAALALGMTRWQAITSIILPIGLRTAIPALTNELVYLLK 163 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394 SS+A + +LV G I ++T +E+ I +YL+ S+ I M RL K+A+ Sbjct: 164 YSSIAYFLAVVELVYAGKIIGSETFAYLEVYTIIALVYLAFSLAITRTMKRLEKKVAI 221 Score = 43.1 bits (100), Expect = 0.067, Method: Compositional matrix adjust. Identities = 32/110 (29%), Positives = 48/110 (43%), Gaps = 12/110 (10%) Query: 70 FEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWIC 129 E+ Q I S+ Y + + G NT L + +GTL+ GRL + + W+ Sbjct: 1 MELLQRIAELLSEPRYVSLLAEGIRNTLILTAASFTMGFALGTLIAIGRLYGPRPLRWLL 60 Query: 130 RVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLP------FGMFLNN 173 YVE+ R P L+ +F LY + +P I L GM LN+ Sbjct: 61 AGYVELIRGTPMLLQLFILYYA------LPQAGISLAAMTAAILGMGLNS 104 >gi|121610276|ref|YP_998083.1| polar amino acid ABC transporter inner membrane subunit [Verminephrobacter eiseniae EF01-2] gi|121554916|gb|ABM59065.1| polar amino acid ABC transporter, inner membrane subunit [Verminephrobacter eiseniae EF01-2] Length = 223 Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 44/118 (37%), Positives = 75/118 (63%), Gaps = 1/118 (0%) Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322 SP +L IA+ A+ EI+R+G+ ++P+GQ+EA +AL L + RLV+L A+R+ Sbjct: 88 SPHTAAL-IAMVVNLGAYATEIIRAGIESIPKGQIEAGLALNLKAHQIFRLVVLKPALRA 146 Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380 I P L+SQ++ L+ SS+ + DL SV + ++T ++ EI ++ IYLSL+++ Sbjct: 147 IFPALSSQFILLMLTSSVVSVISADDLTSVAANLQSRTFRSFEIYIVVTAIYLSLALI 204 >gi|315037817|ref|YP_004031385.1| glutamine ABC transporter membrane protein [Lactobacillus amylovorus GRL 1112] gi|325956292|ref|YP_004286902.1| glutamine ABC transporter membrane protein [Lactobacillus acidophilus 30SC] gi|312275950|gb|ADQ58590.1| glutamine ABC transporter membrane protein [Lactobacillus amylovorus GRL 1112] gi|325332857|gb|ADZ06765.1| glutamine ABC transporter membrane protein [Lactobacillus acidophilus 30SC] gi|327183111|gb|AEA31558.1| glutamine ABC transporter membrane protein [Lactobacillus amylovorus GRL 1118] Length = 218 Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 64/206 (31%), Positives = 101/206 (49%), Gaps = 31/206 (15%) Query: 193 SFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPTLVLIALKYQLHF 246 SFV+G++L L ++ G + LPLL I F FGLP L Sbjct: 34 SFVVGLILGLIRYMKVKYLSAIVGFIIDIIRNLPLLLIIFFTYFGLPQL----------- 82 Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306 G +P S+ AL + A +AEIVRSG+ +V GQME A + G++ Sbjct: 83 ------------GIVTNPTTASI-TALVIFEGAMLAEIVRSGIGSVDPGQMEGARSNGMS 129 Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ-TGQAIE 365 + +A V++PQA+ ++IP L SQ+++L+K++SLA + +L+ I +Q T I Sbjct: 130 YGQAMYHVIMPQALHNMIPALLSQFVSLVKDTSLATIIVLPELLYHAQIIYSQNTTYLIP 189 Query: 366 IILIWMFIYLSLSIMIALFMNRLNAK 391 I +I +Y + ++ N L K Sbjct: 190 IYVIIAVMYFIVCFCLSQVANYLQKK 215 >gi|311895157|dbj|BAJ27565.1| putative glutamate ABC transporter permease protein [Kitasatospora setae KM-6054] Length = 285 Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 46/146 (31%), Positives = 79/146 (54%), Gaps = 3/146 (2%) Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308 P+L FI + +P +L L+ Y + +AE+ R+G++AVPRGQ EAA ALGL Sbjct: 116 PLLVMIFFIFVALKAPPMWALVAGLALYNGSVLAEVFRAGVLAVPRGQKEAAYALGLRKT 175 Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368 + VL+PQA R+++P + SQ + LK++SL + + + + G I + I Sbjct: 176 QVMAYVLVPQANRAMLPAIVSQLVVALKDTSLGFLITYEEFLHAGKLIATNLDYDLPFIP 235 Query: 369 IWMFI---YLSLSIMIALFMNRLNAK 391 + M I Y+ + ++++ F L + Sbjct: 236 VVMVIAPVYIGMCLLLSWFAKWLERR 261 Score = 43.1 bits (100), Expect = 0.083, Method: Compositional matrix adjust. Identities = 20/39 (51%), Positives = 27/39 (69%) Query: 111 GTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 G L AGRLS ++ V W+ V VE FR +P LV+IFF++ Sbjct: 87 GALFAAGRLSEHRAVRWVSTVVVEFFRAMPLLVMIFFIF 125 >gi|257093094|ref|YP_003166735.1| polar amino acid ABC transporter inner membrane subunit [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257045618|gb|ACV34806.1| polar amino acid ABC transporter, inner membrane subunit [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 252 Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 48/134 (35%), Positives = 77/134 (57%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 +F IALS A+ E VR+G++AVP GQ+EAA ALGLT + ++LPQ+MR + Sbjct: 119 DFACAAIALSLNVGAYNTECVRAGILAVPHGQVEAARALGLTPMQTFMDIVLPQSMRVAL 178 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 P L + +L+K+SSLA A+ +L VG + ++ Q I + + IYL L+ Sbjct: 179 PALANNLASLVKDSSLAYAISVVELTMVGYRVQAESYQPIPVFITVAAIYLILTTAFTTL 238 Query: 385 MNRLNAKIALKEKK 398 L +++ + +K+ Sbjct: 239 TAALESQLDVGQKR 252 Score = 37.4 bits (85), Expect = 4.4, Method: Compositional matrix adjust. Identities = 35/132 (26%), Positives = 63/132 (47%), Gaps = 17/132 (12%) Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFG 168 +IG L G G+LS + W+C YV + R P L+ I F++ L P +++P G Sbjct: 64 VIGVLAGLGKLSRFWPLRWLCDSYVWLIRGTPLLLQILFVW------LAFP---LLMPEG 114 Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL 228 + L++ + L+++ A + V +L++ H + +AL L + TF+ Sbjct: 115 VELSDFACAAIALSLNVGA--YNTECVRAGILAV------PHGQVEAARALGLTPMQTFM 166 Query: 229 IFGLPTLVLIAL 240 LP + +AL Sbjct: 167 DIVLPQSMRVAL 178 >gi|146308573|ref|YP_001189038.1| polar amino acid ABC transporter, inner membrane subunit [Pseudomonas mendocina ymp] gi|145576774|gb|ABP86306.1| amino acid ABC transporter membrane protein 2, PAAT family [Pseudomonas mendocina ymp] Length = 365 Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 40/112 (35%), Positives = 66/112 (58%), Gaps = 17/112 (15%) Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299 L +HFDK M I + + +A+IAE+VR GL A+P+GQ EA Sbjct: 221 LPEGMHFDK-----------------LMRALIGVILFQSAYIAEVVRGGLQAIPKGQYEA 263 Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 A A+GL + + LV+LPQA++ +IP + + +++L K++SL + +G DL++ Sbjct: 264 AAAMGLGYWRMMGLVILPQALKLVIPGIVNTFISLFKDTSLVIIIGLFDLLN 315 >gi|90961050|ref|YP_534966.1| glutamine-binding protein / glutamine transport system permease protein [Lactobacillus salivarius UCC118] gi|90820244|gb|ABD98883.1| Glutamine-binding protein / Glutamine transport system permease protein [Lactobacillus salivarius UCC118] Length = 485 Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 49/176 (27%), Positives = 88/176 (50%), Gaps = 23/176 (13%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 + LPLL ++ F+ G+P+L T P F++ I L+ Sbjct: 331 RGLPLLVLALFIYNGIPSLT-----------------------GTKIPAFIAGIITLTLN 367 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 A+ A V+ G+ AV +GQMEAA +LGL+ KA + ++LPQ ++ ++P +Q++ LK Sbjct: 368 EGAYTAAFVKGGIEAVDKGQMEAARSLGLSFGKAMKKIILPQGIKIMVPSFVNQFIITLK 427 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 ++S+ +G +L G II + + ++ I +YL + ++ N L K+ Sbjct: 428 DTSILSIIGILELTQTGKIIIARNLEGFKVWAIIGLMYLIVITVLTWISNYLQKKM 483 Score = 37.0 bits (84), Expect = 5.9, Method: Compositional matrix adjust. Identities = 22/66 (33%), Positives = 34/66 (51%) Query: 90 LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 L G T +L G+I ATI G ++G + NK I + +FR +P LV+ F+Y Sbjct: 284 LNGLWKTIYLTILGIIGATIFGIVIGFLGVIPNKFAQGISTTVIYIFRGLPLLVLALFIY 343 Query: 150 KSVLSV 155 + S+ Sbjct: 344 NGIPSL 349 >gi|83746553|ref|ZP_00943604.1| Glutamine transport system permease protein glnP [Ralstonia solanacearum UW551] gi|207743863|ref|YP_002260255.1| amino acid transmembrane protein [Ralstonia solanacearum IPO1609] gi|83726884|gb|EAP74011.1| Glutamine transport system permease protein glnP [Ralstonia solanacearum UW551] gi|206595263|emb|CAQ62190.1| amino acid transmembrane protein [Ralstonia solanacearum IPO1609] Length = 230 Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 35/85 (41%), Positives = 62/85 (72%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 +F ++ AL + A++AEIVR+G+ A+PRGQME+A +LGL++ +A R V+LPQA+R+++ Sbjct: 94 QFSTMLTALVIFDGAYLAEIVRAGIQALPRGQMESARSLGLSYMQAMRRVILPQALRNML 153 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADL 349 P L +Q ++ +K +SL + ++ Sbjct: 154 PSLVNQLVSTIKETSLGYIISLPEV 178 >gi|327479740|gb|AEA83050.1| polar amino acid ABC transporter, inner membrane subunit [Pseudomonas stutzeri DSM 4166] Length = 365 Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 34/76 (44%), Positives = 57/76 (75%) Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335 + AA+IAE+VR GL A+P+GQ EAA A+GL + ++T LV+LPQA++ +IP + + ++ L Sbjct: 240 FEAAYIAEVVRGGLQAIPKGQYEAAAAMGLGYWRSTLLVILPQALKLVIPGIVNTFIALF 299 Query: 336 KNSSLAVAVGFADLVS 351 K++SL + +G D ++ Sbjct: 300 KDTSLVIIIGLFDFLN 315 >gi|322391487|ref|ZP_08064956.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus peroris ATCC 700780] gi|321145570|gb|EFX40962.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus peroris ATCC 700780] Length = 543 Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 39/123 (31%), Positives = 71/123 (57%) Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 +S T A++ EIVR G++AV +GQ EAA ALG+TH + R ++LPQ +R+I+P ++++ Sbjct: 406 VSINTGAYMTEIVRGGILAVDKGQFEAATALGMTHNQTMRKIVLPQVIRNILPATGNEFV 465 Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 +K++S+ + +L G T+ QT Q + I IY L+ + + + ++ Sbjct: 466 INIKDTSVLNVISVVELYFSGNTVATQTYQYFQTFTIIAVIYFILTFTVTRILRYIEKRM 525 Query: 393 ALK 395 + Sbjct: 526 DMD 528 >gi|313885015|ref|ZP_07818767.1| ABC transporter, permease protein [Eremococcus coleocola ACS-139-V-Col8] gi|312619706|gb|EFR31143.1| ABC transporter, permease protein [Eremococcus coleocola ACS-139-V-Col8] Length = 483 Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 45/147 (30%), Positives = 77/147 (52%), Gaps = 23/147 (15%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 + LPLL ++ F+ FG+P + I N I G + L Sbjct: 329 RGLPLLVLAFFIYFGIPQMTGIKFS-------------NLIAG----------VLTLGLN 365 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 AA++AEIVR G+ ++ +GQMEA +LGL+ + + ++LPQA + ++P +Q++ LK Sbjct: 366 AAAYVAEIVRGGVQSIAQGQMEAGRSLGLSRKTTMKKIVLPQAFKIMLPSFINQFVITLK 425 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQA 363 ++S+ +G +L G II +T Q+ Sbjct: 426 DTSILSVIGMVELTQTGRIIIARTYQS 452 Score = 45.1 bits (105), Expect = 0.018, Method: Compositional matrix adjust. Identities = 42/146 (28%), Positives = 69/146 (47%), Gaps = 19/146 (13%) Query: 88 AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147 A++VG T +I A I+GTL+G + S N ++ + VY+++ R +P LV+ FF Sbjct: 280 ALMVGLGKTLMATILSLIIAFILGTLLGLMKASHNNILRGVSTVYIDIMRGLPLLVLAFF 339 Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRL 207 +Y IP + G+ +N L LT+ NA +V V G V S+ ++ Sbjct: 340 IY------FGIPQMT-----GIKFSN--LIAGVLTLGLNAAAYVAEIVRGGVQSIAQGQM 386 Query: 208 SRHFHEKTGKALPLLYISTFLIFGLP 233 + G++L L +T LP Sbjct: 387 ------EAGRSLGLSRKTTMKKIVLP 406 >gi|300811214|ref|ZP_07091721.1| ABC transporter, permease protein [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|300497801|gb|EFK32816.1| ABC transporter, permease protein [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] Length = 485 Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 67/258 (25%), Positives = 116/258 (44%), Gaps = 34/258 (13%) Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI--FVFSFVLGIVL 200 +V + K + + D SI+ G+ +N G L M I + + V G++L Sbjct: 252 IVNKYTSKKAVKSQVVADTSIL---GLIKDNAGALLQGLWMTIELSIVGILAALVFGLIL 308 Query: 201 SLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQF 254 + + +H + +P++ ++ F+ G+PTL L ++L Sbjct: 309 GIMGIAEHKFWHGLANVIIYIFRGIPMMVLAFFIYIGMPTL----LGHKL---------- 354 Query: 255 NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLV 314 P F + + L A+I IVR G +V GQ EAA +LGL + KA V Sbjct: 355 ---------PLFTAGILTLMLDEGAYIGAIVRGGFESVDVGQWEAARSLGLPYYKALWKV 405 Query: 315 LLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374 + PQ + +IP L +Q++ LK++S+ A+G DL G +I Q Q ++ LI +Y Sbjct: 406 VAPQGFKLMIPSLVNQFIITLKDTSILSAIGVMDLTQTGTNLIAQNFQGFKMWLIIAVMY 465 Query: 375 LSLSIMIALFMNRLNAKI 392 L + ++ N + K+ Sbjct: 466 LIIITLLTWLSNYIQKKM 483 >gi|172039038|ref|YP_001805539.1| amino acid ABC transporter permease, His/Glu/Gln/Arg/opine [Cyanothece sp. ATCC 51142] gi|171700492|gb|ACB53473.1| amino acid ABC transporter permease protein, His/Glu/Gln/Arg/opine [Cyanothece sp. ATCC 51142] Length = 391 Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 37/84 (44%), Positives = 59/84 (70%) Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333 + ++AA++AE VR GL +VP+GQ+EAA A+GL LV+LPQA+R +IP + Q+++ Sbjct: 271 TLFSAAYLAENVRGGLQSVPKGQIEAAKAVGLNGFFVLILVVLPQALRVVIPTIVGQFIS 330 Query: 334 LLKNSSLAVAVGFADLVSVGGTII 357 L K++SL VG DL+ + +I+ Sbjct: 331 LFKDTSLLAIVGLVDLLGISQSIL 354 >gi|116514929|ref|YP_813835.1| ABC-type amino acid transport system, permease and periplasmic component [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|116094244|gb|ABJ59397.1| amino acid ABC transporter substrate-binding protein, PAAT family / amino acid ABC transporter membrane protein, PAAT family [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] Length = 486 Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 67/258 (25%), Positives = 116/258 (44%), Gaps = 34/258 (13%) Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI--FVFSFVLGIVL 200 +V + K + + D SI+ G+ +N G L M I + + V G++L Sbjct: 253 IVNKYTSKKAVKSQVVADTSIL---GLIKDNAGALLQGLWMTIELSIVGILAALVFGLIL 309 Query: 201 SLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQF 254 + + +H + +P++ ++ F+ G+PTL L ++L Sbjct: 310 GIMGIAEHKFWHGLANVIIYIFRGIPMMVLAFFIYIGMPTL----LGHKL---------- 355 Query: 255 NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLV 314 P F + + L A+I IVR G +V GQ EAA +LGL + KA V Sbjct: 356 ---------PLFTAGILTLMLDEGAYIGAIVRGGFESVDVGQWEAARSLGLPYYKALWKV 406 Query: 315 LLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374 + PQ + +IP L +Q++ LK++S+ A+G DL G +I Q Q ++ LI +Y Sbjct: 407 VAPQGFKLMIPSLVNQFIITLKDTSILSAIGVMDLTQTGTNLIAQNFQGFKMWLIIAVMY 466 Query: 375 LSLSIMIALFMNRLNAKI 392 L + ++ N + K+ Sbjct: 467 LIIITLLTWLSNYIQKKM 484 >gi|323155720|gb|EFZ41890.1| glutamine transport system permease glnP domain protein [Escherichia coli EPECa14] Length = 132 Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 40/129 (31%), Positives = 79/129 (61%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + + + + A+IAEI R ++++ +G EA +ALGL+ + R V+LP A+R ++P Sbjct: 3 FTAAVVTIMINSGAYIAEITRGAVLSIHKGFREAGLALGLSRWETIRYVILPLALRRMLP 62 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PL +Q++ +K++SL + +G A+L G II +A+EI +YL ++++++ + Sbjct: 63 PLGNQWIISIKDTSLFIVIGVAELTRQGQEIIAGNFRALEIWSAVAVLYLIITLVLSFIL 122 Query: 386 NRLNAKIAL 394 RL ++ + Sbjct: 123 RRLERRMKI 131 >gi|225860475|ref|YP_002741984.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae Taiwan19F-14] gi|298229959|ref|ZP_06963640.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae str. Canada MDR_19F] gi|298254588|ref|ZP_06978174.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae str. Canada MDR_19A] gi|225727474|gb|ACO23325.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae Taiwan19F-14] gi|327390862|gb|EGE89202.1| amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Streptococcus pneumoniae GA04375] Length = 521 Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 39/109 (35%), Positives = 66/109 (60%) Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 +S T A++ EIVR G++AV +GQ EAA ALG+TH + R ++LPQ +R+I+P ++++ Sbjct: 384 VSINTGAYMTEIVRGGILAVDKGQFEAATALGMTHNQTMRKIVLPQVVRNILPATGNEFV 443 Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 +K++S+ + +L G T+ QT Q + I IY L+ + Sbjct: 444 INIKDTSVLNVISVVELYFSGNTVATQTYQYFQTFTIIAVIYFVLTFTV 492 >gi|323467038|gb|ADX70725.1| Glutamine ABC transporter, permease protein [Lactobacillus helveticus H10] Length = 217 Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 64/206 (31%), Positives = 102/206 (49%), Gaps = 31/206 (15%) Query: 193 SFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPTLVLIALKYQLHF 246 SFV+G++L L ++ G + LPLL I F FGLP L Sbjct: 34 SFVVGLILGLIRYMKIKYVSAIVGFIIDIIRNLPLLLIIFFTYFGLPQL----------- 82 Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306 G +P S+ AL + AA +AEIVRSG+ +V GQME A + G++ Sbjct: 83 ------------GIVTNPTTASI-AALVIFEAAMLAEIVRSGIGSVDPGQMEGARSNGMS 129 Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ-TGQAIE 365 + +A V++PQA+ ++IP L SQ+++L+K++SLA + +L+ I +Q T I Sbjct: 130 YGQAMYHVVMPQALHNMIPALLSQFVSLVKDTSLATIIVLPELLYHAQIIYSQNTTYLIP 189 Query: 366 IILIWMFIYLSLSIMIALFMNRLNAK 391 + +I +Y + ++ N L K Sbjct: 190 MYVIIAIMYFVVCFCLSTIANYLQKK 215 >gi|283954500|ref|ZP_06372019.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Campylobacter jejuni subsp. jejuni 414] gi|283793904|gb|EFC32654.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Campylobacter jejuni subsp. jejuni 414] Length = 225 Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 51/169 (30%), Positives = 89/169 (52%), Gaps = 21/169 (12%) Query: 228 LIFGLPTLVLIALKY-----QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282 LI G P LV + L Y L FD ++ G T+ L+C++AA++A Sbjct: 72 LIRGTPLLVQVLLIYYIIANNLGFDN------RYVVGVTI----------LACFSAAYLA 115 Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342 EI R+G++++ Q+E+A ALGL + ++ PQA+++I+ PL+ Q+ NL+K+SSL Sbjct: 116 EIFRAGILSISISQLESARALGLKEIQICTYIIFPQALKNILAPLSGQFANLIKDSSLLS 175 Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 + +L + + T +E ++ YL L++ I++ L K Sbjct: 176 VIAVNELTQNAQEVNSYTFATLEAYVVLAIAYLILTLPISILSRYLERK 224 >gi|257093639|ref|YP_003167280.1| polar amino acid ABC transporter inner membrane subunit [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257046163|gb|ACV35351.1| polar amino acid ABC transporter, inner membrane subunit [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 217 Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 60/222 (27%), Positives = 111/222 (50%), Gaps = 38/222 (17%) Query: 188 KIFVFSFVL----GIVLSLFATRLSRHFHEKTG---------KALPLLYISTFLIFGLPT 234 ++F+ SFVL G+VL+L R+SR F +G + PL+ F+ F LP Sbjct: 20 QVFLISFVLAVPLGLVLAL--VRISR-FVVLSGLVNGYIWLMRGTPLMLQMLFIYFALPF 76 Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294 + +I ++ P+F + +A AA+ AEI R+G+ ++ R Sbjct: 77 VPVIGVRL---------------------PDFPAAIVAFVLNYAAYFAEIFRAGIQSIDR 115 Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354 GQ E A LGL++ + R ++LPQ ++ I+PP++++ + L+K++SL + DL+ Sbjct: 116 GQYEGARVLGLSYPQTMRRIVLPQVLKRILPPMSNETITLVKDTSLIYVLAMNDLLRAAR 175 Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 I+ + ++ F YL +++++ L L K A+ + Sbjct: 176 GIVQRDFTTTPFVVAAAF-YLVMTLVLTLGFQHLERKYAVYD 216 >gi|78779549|ref|YP_397661.1| amino acid ABC transporter permease [Prochlorococcus marinus str. MIT 9312] gi|78713048|gb|ABB50225.1| amino acid ABC transporter membrane protein 2, PAAT family [Prochlorococcus marinus str. MIT 9312] Length = 343 Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 66/251 (26%), Positives = 120/251 (47%), Gaps = 40/251 (15%) Query: 165 LPFGMFLNNRGLSFP----------TLTMDTNAKIFVFSFVLGIVL------SLFATRLS 208 +P G++L + GL TLT+ + +FS +GI+L S+F + S Sbjct: 112 VPLGIYLLSGGLGLNPVMTRHWGGLTLTILITSCSILFSLPIGILLALCRRSSIFLIQKS 171 Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268 + +A+PL+ + L FG L+ + L L D+ Sbjct: 172 SSLYIDVMRAVPLISV---LFFG-QLLIPLFLPVGLEIDR-----------------VWR 210 Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328 IA + + +A+IAE ++ GL ++P+ Q+EAA +LGL + +L+PQA+R +P +T Sbjct: 211 AVIAFTFFVSAYIAEDIKGGLQSIPKNQIEAAKSLGLNKYQINIYILIPQALRVALPAIT 270 Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQ---TGQAIEIILIWMFIYLSLSIMIALFM 385 +Q + L +N+SL +G +L+ V +I+ GQ IE+ + +Y ++A Sbjct: 271 NQLIGLFQNTSLMAILGLMELLGVSRSILANPEFIGQYIEVYIWLASVYWLFCTIMAFVS 330 Query: 386 NRLNAKIALKE 396 +L K+ + + Sbjct: 331 KKLEQKMTINK 341 >gi|15900370|ref|NP_344974.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae TIGR4] gi|116516213|ref|YP_815922.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae D39] gi|149023738|ref|ZP_01836218.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae SP23-BS72] gi|14971923|gb|AAK74614.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae TIGR4] gi|116076789|gb|ABJ54509.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae D39] gi|147929675|gb|EDK80667.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae SP23-BS72] Length = 521 Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 39/109 (35%), Positives = 66/109 (60%) Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 +S T A++ EIVR G++AV +GQ EAA ALG+TH + R ++LPQ +R+I+P ++++ Sbjct: 384 VSINTGAYMTEIVRGGILAVDKGQFEAATALGMTHNQTMRKIVLPQVVRNILPATGNEFV 443 Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 +K++S+ + +L G T+ QT Q + I IY L+ + Sbjct: 444 INIKDTSVLNVISVVELYFSGNTVATQTYQYFQTFTIIAVIYFVLTFTV 492 >gi|326439679|ref|ZP_08214413.1| ABC transporter permease protein [Streptomyces clavuligerus ATCC 27064] Length = 293 Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 44/117 (37%), Positives = 73/117 (62%), Gaps = 5/117 (4%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + L AA+IAE +R+G+ AVPRGQ+EAA +LG +H +A V++PQA R ++PPLT++ Sbjct: 165 LGLGLVAAAYIAETIRAGIQAVPRGQLEAARSLGFSHARAMVSVIIPQAFRIVVPPLTNE 224 Query: 331 YLNLLKNSSLAVAVGFA----DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 + L K+SSL + +G +L G + +Q+ + IL+ YL +++ + L Sbjct: 225 LVLLFKDSSLVLFLGVTLEERELTKFGRDLASQSANSTP-ILVAGVCYLLVTVPLGL 280 >gi|326403333|ref|YP_004283414.1| putative amino acid ABC transporter permease [Acidiphilium multivorum AIU301] gi|325050194|dbj|BAJ80532.1| putative amino acid ABC transporter permease protein [Acidiphilium multivorum AIU301] Length = 274 Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 43/128 (33%), Positives = 83/128 (64%), Gaps = 5/128 (3%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 + ++++AL +A++AE +R+G+ AVP+GQ+EAA +LG++ +A R ++L QA+R ++P Sbjct: 141 YGTVWVALGVVGSAYMAETMRAGIQAVPKGQVEAARSLGMSSAQAMRKIVLMQALRLMVP 200 Query: 326 PLTSQYLNLLKNSSLAVAVGFA----DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 PLT++ + L+K+SSL VG + DL G + N T I +++ YL +++ + Sbjct: 201 PLTNELIMLIKDSSLVFVVGLSAGQFDLTEFGRSTAN-TNVNITPLVVAGLGYLLITLPL 259 Query: 382 ALFMNRLN 389 ++ + R+ Sbjct: 260 SMLVRRME 267 >gi|253574193|ref|ZP_04851535.1| amino acid ABC transporter [Paenibacillus sp. oral taxon 786 str. D14] gi|251846670|gb|EES74676.1| amino acid ABC transporter [Paenibacillus sp. oral taxon 786 str. D14] Length = 222 Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 40/128 (31%), Positives = 74/128 (57%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + I + A+ +EIVR+ ++++ GQ EAA +LG+T +A R ++LPQA R +P Sbjct: 90 FPAAVIGFTLSVGAYGSEIVRAAILSIHEGQWEAAYSLGMTRLQALRRIILPQAARVSVP 149 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PL + +++L+K++SLA V + ++ I + T + + + IYL S +++ Sbjct: 150 PLANSFISLVKDTSLAATVTYTEMFRTAQQITSTTYEPLVVYSEAGLIYLIFSTILSALQ 209 Query: 386 NRLNAKIA 393 NRL ++ Sbjct: 210 NRLEKRLG 217 >gi|210629972|ref|ZP_03296195.1| hypothetical protein COLSTE_00079 [Collinsella stercoris DSM 13279] gi|210160723|gb|EEA91694.1| hypothetical protein COLSTE_00079 [Collinsella stercoris DSM 13279] Length = 252 Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 41/121 (33%), Positives = 71/121 (58%), Gaps = 1/121 (0%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + + Y AA++AE++R+G+ AVPRGQMEAA + G + + ++LPQ + I+PPL +Q Sbjct: 108 LGVGLYHAAYVAEVIRTGIEAVPRGQMEAAQSQGFSRLQTYAYIVLPQTFKIILPPLCNQ 167 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 LNL+KN+S+ V DL+ ++ G ++ +I F+Y + +A+ L Sbjct: 168 ALNLVKNTSVLALVAGGDLMYRSDNFVSLYGY-LQGYIICCFMYFLICFPLAMLGQWLER 226 Query: 391 K 391 + Sbjct: 227 R 227 >gi|149003550|ref|ZP_01828424.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae SP14-BS69] gi|147758486|gb|EDK65485.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae SP14-BS69] Length = 521 Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 39/109 (35%), Positives = 66/109 (60%) Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 +S T A++ EIVR G++AV +GQ EAA ALG+TH + R ++LPQ +R+I+P ++++ Sbjct: 384 VSINTGAYMTEIVRGGILAVDKGQFEAATALGMTHNQTMRKIVLPQVVRNILPATGNEFV 443 Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 +K++S+ + +L G T+ QT Q + I IY L+ + Sbjct: 444 INIKDTSVLNVISVVELYFSGNTVATQTYQYFQTFTIIAVIYFVLTFTV 492 Score = 37.4 bits (85), Expect = 3.7, Method: Compositional matrix adjust. Identities = 24/64 (37%), Positives = 31/64 (48%), Gaps = 10/64 (15%) Query: 96 TFWLAFSGMIPATIIGTLVGAGR---LSANK-------LVAWICRVYVEVFRNIPPLVVI 145 T ++ G I IIG +G R LS NK LV WI VY+E+FR P +V Sbjct: 300 TLLISIVGTITGLIIGLAIGVFRTAPLSENKVIYSLQKLVGWILNVYIEIFRGTPMIVQS 359 Query: 146 FFLY 149 +Y Sbjct: 360 MVIY 363 >gi|118470944|ref|YP_887549.1| amino acid ABC transporter permease [Mycobacterium smegmatis str. MC2 155] gi|118172231|gb|ABK73127.1| ABC-type amino acid transport system, permease component [Mycobacterium smegmatis str. MC2 155] Length = 310 Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 39/87 (44%), Positives = 60/87 (68%) Query: 260 STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319 ++S F+ + L+ AA++AEI+R+G+ +VP GQMEA+ ALG++ A R +LPQA Sbjct: 149 QSLSIPFLLAILGLALNEAAYMAEIIRAGISSVPEGQMEASTALGMSWGLAMRRTVLPQA 208 Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGF 346 MR IIPP ++ +++LK +SL AV F Sbjct: 209 MRVIIPPTGNEIISMLKTTSLVTAVPF 235 Score = 37.0 bits (84), Expect = 5.1, Method: Compositional matrix adjust. Identities = 33/96 (34%), Positives = 46/96 (47%), Gaps = 10/96 (10%) Query: 91 VGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYK 150 VG +NT L M+ A ++G L+ RLS N + + VY+ +FR P V + F Sbjct: 66 VGVLNTLQLTIYSMLIAIVLGVLLAVMRLSPNPVFRSVAWVYLWIFRGTPVYVQLVF--- 122 Query: 151 SVLSVLPIPDHSIVL--PFG---MFLNNRGLSFPTL 181 +LP +I L PFG LN + LS P L Sbjct: 123 --WGLLPTIYQNIQLGVPFGPSFFHLNLQSLSIPFL 156 >gi|329298831|ref|ZP_08256167.1| polar amino acid ABC transporter inner membrane subunit [Plautia stali symbiont] Length = 229 Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 36/98 (36%), Positives = 66/98 (67%) Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 AA++AEI+R+GL++V GQ+E A G++ +A R +++PQAMR+IIPP +Q ++++K Sbjct: 89 AAYMAEIIRAGLLSVDHGQVETTQAFGMSRSRALRRIIIPQAMRAIIPPTGNQLISMIKA 148 Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375 +SL + DL+ + N+T + I ++++ + YL Sbjct: 149 TSLVSVIAMGDLLYSVQAVYNRTFEIIPMLMVAVIWYL 186 >gi|307704003|ref|ZP_07640937.1| amino acid ABC transporter, amino acid-binding/permease protein [Streptococcus mitis SK597] gi|307622469|gb|EFO01472.1| amino acid ABC transporter, amino acid-binding/permease protein [Streptococcus mitis SK597] Length = 521 Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 39/109 (35%), Positives = 66/109 (60%) Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 +S T A++ EIVR G++AV +GQ EAA ALG+TH + R ++LPQ +R+I+P ++++ Sbjct: 384 VSINTGAYMTEIVRGGILAVDKGQFEAATALGMTHNQTMRKIVLPQVVRNILPATGNEFV 443 Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 +K++S+ + +L G T+ QT Q + I IY L+ + Sbjct: 444 INIKDTSVLNVISVVELYFSGNTVATQTYQYFQTFTIIAVIYFVLTFTV 492 Score = 37.4 bits (85), Expect = 3.8, Method: Compositional matrix adjust. Identities = 24/64 (37%), Positives = 31/64 (48%), Gaps = 10/64 (15%) Query: 96 TFWLAFSGMIPATIIGTLVGAGR---LSANK-------LVAWICRVYVEVFRNIPPLVVI 145 T ++ G I IIG +G R LS NK LV WI VY+E+FR P +V Sbjct: 300 TLLISIVGTITGLIIGLAIGVFRTAPLSENKAIYGLQKLVGWILNVYIEIFRGTPMIVQS 359 Query: 146 FFLY 149 +Y Sbjct: 360 MVIY 363 >gi|300703460|ref|YP_003745062.1| amino acid transmembrane ABC transporter protein [Ralstonia solanacearum CFBP2957] gi|299071123|emb|CBJ42435.1| putative amino acid transmembrane abc transporter protein [Ralstonia solanacearum CFBP2957] Length = 230 Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 35/85 (41%), Positives = 62/85 (72%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 +F ++ AL + A++AEIVR+G+ A+PRGQME+A +LGL++ +A R V+LPQA+R+++ Sbjct: 94 QFSTMLTALVIFDGAYLAEIVRAGIQALPRGQMESARSLGLSYMQAMRRVILPQALRNML 153 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADL 349 P L +Q ++ +K +SL + ++ Sbjct: 154 PSLVNQLVSTIKETSLGYIISLPEV 178 >gi|294083903|ref|YP_003550660.1| amino acid ABC transporter permease [Candidatus Puniceispirillum marinum IMCC1322] gi|292663475|gb|ADE38576.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Candidatus Puniceispirillum marinum IMCC1322] Length = 298 Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 44/145 (30%), Positives = 78/145 (53%), Gaps = 1/145 (0%) Query: 254 FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313 F G + F++ + L+ + A+I EIVR+G+ +VP+GQ EAA A+GL+ Sbjct: 155 FTLFGDPKLFSNFVAGALCLALFEGAYITEIVRAGIQSVPKGQWEAARAVGLSPLDVLGN 214 Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI 373 ++ PQA+R I+PPL Q++ L+K+S++ + +L + + + T + E +I + Sbjct: 215 IIFPQAVRKILPPLAGQFITLIKDSAIVSLISIQELTFLATEVASSTTKVFETWIIVGAM 274 Query: 374 YLSLSIMIALFMNRLNAKIALKEKK 398 Y + A L K ALK ++ Sbjct: 275 YFIICYSFAALFAHLE-KRALKARR 298 Score = 45.1 bits (105), Expect = 0.023, Method: Compositional matrix adjust. Identities = 26/53 (49%), Positives = 30/53 (56%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141 +L G T LAF I A IIG L+G R S N + I R YVE+ RNIPP Sbjct: 66 LLKGIATTLRLAFWATIVAAIIGLLMGFMRTSKNLAMRMISRCYVELIRNIPP 118 >gi|269120482|ref|YP_003308659.1| polar amino acid ABC transporter inner membrane subunit [Sebaldella termitidis ATCC 33386] gi|268614360|gb|ACZ08728.1| polar amino acid ABC transporter, inner membrane subunit [Sebaldella termitidis ATCC 33386] Length = 239 Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 46/133 (34%), Positives = 78/133 (58%), Gaps = 4/133 (3%) Query: 264 PEFMSLYIA----LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319 P MS IA +S A++AEI R G+ A+ +GQMEAA +LGL ++ A R V+LPQA Sbjct: 105 PTGMSAEIAGVIIISLNAGAYMAEIFRGGIQAIDKGQMEAARSLGLPYKHAMRKVVLPQA 164 Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379 ++++IP + +Q++ LK++SL +G +L G TI + E LI +Y + Sbjct: 165 VKNMIPAILNQFIISLKDTSLLTIIGVPELTGNGKTISAANYKYFETYLIIGIMYYVIIK 224 Query: 380 MIALFMNRLNAKI 392 +++ +++ K+ Sbjct: 225 VLSFVFSKIEEKL 237 >gi|209809239|ref|YP_002264777.1| binding-protein-dependent transport system inner membrane component [Aliivibrio salmonicida LFI1238] gi|208010801|emb|CAQ81198.1| binding-protein-dependent transport system inner membrane component [Aliivibrio salmonicida LFI1238] Length = 294 Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 42/109 (38%), Positives = 66/109 (60%) Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317 G +++ +S + + +AA+I E+VRSGL A+P+GQ EAA +LGL+ R ++ P Sbjct: 155 GPASLWENLISGVLCIGMISAAYIGEVVRSGLDAIPKGQHEAARSLGLSTWHRYRYIIAP 214 Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 Q + IIPPL Q ++L+K+SS+ + +L VG I N +G EI Sbjct: 215 QVFKVIIPPLAGQCISLVKDSSIISLISIQELTFVGTEIANSSGMIFEI 263 Score = 45.1 bits (105), Expect = 0.021, Method: Compositional matrix adjust. Identities = 27/71 (38%), Positives = 37/71 (52%), Gaps = 9/71 (12%) Query: 73 DQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVY 132 G +PY D G ++T L F GMI A + GTL+G GR S + + Y Sbjct: 55 SDGSLPYFFD---------GIISTLRLTFLGMIFAVLFGTLLGLGRRSNITFIRALSNSY 105 Query: 133 VEVFRNIPPLV 143 +++ RNIPPLV Sbjct: 106 IQLIRNIPPLV 116 >gi|160935368|ref|ZP_02082750.1| hypothetical protein CLOBOL_00263 [Clostridium bolteae ATCC BAA-613] gi|158441726|gb|EDP19426.1| hypothetical protein CLOBOL_00263 [Clostridium bolteae ATCC BAA-613] Length = 224 Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 60/211 (28%), Positives = 103/211 (48%), Gaps = 17/211 (8%) Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240 ++++ +F S G ++ L + H K G + +Y+ LI P LV I Sbjct: 21 VSLELTLTVFALSLFFGTIVGF----LRYNKHHKAGYRIATVYVE--LIRNTPMLVQI-- 72 Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300 + L+F P QF P + + L+ A+IAEIVRSG+ ++P+GQ EAA Sbjct: 73 -FFLYFGLP---QF-----KIYLPALFAGILGLTINNTAYIAEIVRSGIQSIPKGQWEAA 123 Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 LGL V+ PQA+R+I P L +Q++ +L +SL + DL V + +Q Sbjct: 124 NCLGLKPIHTFLDVIFPQALRNIFPSLINQFIMILFGTSLLSVLDIKDLTQVASILNSQN 183 Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 + +E+ + IY +S++ + + +N + Sbjct: 184 FRTLELFTFAIGIYYIMSVICSKILRYVNNR 214 Score = 36.6 bits (83), Expect = 8.0, Method: Compositional matrix adjust. Identities = 27/70 (38%), Positives = 35/70 (50%), Gaps = 13/70 (18%) Query: 111 GTLVGAGRLSANKLVAW-ICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLP--- 166 GT+VG R + + + I VYVE+ RN P LV IFFLY +P I LP Sbjct: 37 GTIVGFLRYNKHHKAGYRIATVYVELIRNTPMLVQIFFLY------FGLPQFKIYLPALF 90 Query: 167 ---FGMFLNN 173 G+ +NN Sbjct: 91 AGILGLTINN 100 >gi|332077738|gb|EGI88199.1| amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Streptococcus pneumoniae GA41301] Length = 521 Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 39/109 (35%), Positives = 66/109 (60%) Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 +S T A++ EIVR G++AV +GQ EAA ALG+TH + R ++LPQ +R+I+P ++++ Sbjct: 384 VSINTGAYMTEIVRGGILAVDKGQFEAATALGMTHNQTMRKIVLPQVVRNILPATGNEFV 443 Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 +K++S+ + +L G T+ QT Q + I IY L+ + Sbjct: 444 INIKDTSVLNVISVVELYFSGNTVATQTYQYFQTFTIIAVIYFVLTFTV 492 >gi|303256728|ref|ZP_07342742.1| polar amino amino acid ABC transporter, PAAT family, permease protein [Burkholderiales bacterium 1_1_47] gi|330999370|ref|ZP_08323087.1| ABC transporter, permease protein [Parasutterella excrementihominis YIT 11859] gi|302860219|gb|EFL83296.1| polar amino amino acid ABC transporter, PAAT family, permease protein [Burkholderiales bacterium 1_1_47] gi|329575228|gb|EGG56779.1| ABC transporter, permease protein [Parasutterella excrementihominis YIT 11859] Length = 250 Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 36/123 (29%), Positives = 76/123 (61%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +A++ A+++E+ R+G+ ++ +GQMEAA ++G+T+ +A ++LPQA R ++PPL + Sbjct: 122 VAITLNAGAYLSEVFRAGIQSLDKGQMEAARSVGMTYWQAMFHIILPQAFRRMLPPLGNN 181 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 + +LK+SSL A+G A+L T+ T + E + +Y +++ +A + ++ Sbjct: 182 AIAILKDSSLVSAIGLAELAYAARTVAGATARYWEPYITISLMYWVMTLGLAYLVKKMEQ 241 Query: 391 KIA 393 ++ Sbjct: 242 RLG 244 >gi|301300302|ref|ZP_07206510.1| ABC transporter, permease protein [Lactobacillus salivarius ACS-116-V-Col5a] gi|300852105|gb|EFK79781.1| ABC transporter, permease protein [Lactobacillus salivarius ACS-116-V-Col5a] Length = 485 Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 49/176 (27%), Positives = 88/176 (50%), Gaps = 23/176 (13%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 + LPLL ++ F+ G+P+L T P F++ I L+ Sbjct: 331 RGLPLLVLALFIYNGIPSLT-----------------------GTKIPAFIAGIITLTLN 367 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 A+ A V+ G+ AV +GQMEAA +LGL+ KA + ++LPQ ++ ++P +Q++ LK Sbjct: 368 EGAYTAAFVKGGIEAVDKGQMEAARSLGLSFGKAMKKIILPQGIKIMVPSFVNQFIITLK 427 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 ++S+ +G +L G II + + ++ I +YL + ++ N L K+ Sbjct: 428 DTSILSIIGILELTQTGKIIIARNLEGFKVWAIIGLMYLIVITVLTWISNYLQKKM 483 Score = 37.0 bits (84), Expect = 5.1, Method: Compositional matrix adjust. Identities = 22/66 (33%), Positives = 34/66 (51%) Query: 90 LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 L G T +L G+I ATI G ++G + NK I + +FR +P LV+ F+Y Sbjct: 284 LNGLWKTIYLTILGIIGATIFGIIIGFLGVIPNKFAQGISTTVIYIFRGLPLLVLALFIY 343 Query: 150 KSVLSV 155 + S+ Sbjct: 344 NGIPSL 349 >gi|238753376|ref|ZP_04614739.1| Glutamine transport system permease protein glnP [Yersinia ruckeri ATCC 29473] gi|238708329|gb|EEQ00684.1| Glutamine transport system permease protein glnP [Yersinia ruckeri ATCC 29473] Length = 204 Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 42/129 (32%), Positives = 76/129 (58%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + + + + A+IAEI R ++++ G EA +ALGL+ R R V+ P A+R ++P Sbjct: 75 FSAAVVTIMINSGAYIAEITRGAVLSIHNGFREAGLALGLSKRDTLRYVIAPLALRRMLP 134 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PL +Q++ +K++SL + +G A+L G II +A+EI IYL +++ ++ + Sbjct: 135 PLGNQWIVSIKDTSLFIVIGVAELTRQGQEIIAGNFRAMEIWTAVAVIYLIITLALSFAL 194 Query: 386 NRLNAKIAL 394 RL K+ + Sbjct: 195 RRLERKLKI 203 >gi|327393252|dbj|BAK10674.1| octopine transport system permease protein OccM [Pantoea ananatis AJ13355] Length = 280 Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 54/147 (36%), Positives = 81/147 (55%), Gaps = 8/147 (5%) Query: 251 LGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306 LGQF I S V P F +ALS TAA+ AEI+R L+AVP GQ+EA +A G++ Sbjct: 114 LGQFGVIRHSFVWPFLREPFSCAVLALSLCTAAYTAEILRGALLAVPAGQVEAGMACGMS 173 Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 R ++ P +R +P +++ + L+K+++LA V D+ V II +T + +E+ Sbjct: 174 RWLLLRRIIAPVMLRYALPAYSTEAILLVKSTALASLVTVWDVTGVAQQIIQRTYRTMEV 233 Query: 367 ILIWMFIYLSLSIMI----ALFMNRLN 389 L IYL L+ +I AL RL Sbjct: 234 FLCAAAIYLILNFIIVQLYALLERRLT 260 >gi|209547422|ref|YP_002279340.1| polar amino acid ABC transporter inner membrane protein [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209538666|gb|ACI58600.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 516 Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 65/213 (30%), Positives = 108/213 (50%), Gaps = 24/213 (11%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 V V+G+ L++ SR LP I T + GLP +V I + Sbjct: 45 VLGVVIGMALAVMGISQSRWLR------LPA-RIYTDIFRGLPAIVTIL----------I 87 Query: 251 LGQ-FNFIGGSTVSPEFMSLYI-ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308 +GQ F IG P L I ALS A+I EI RSG+ +V RGQMEA AL +++ Sbjct: 88 IGQGFARIGREIFGPSPFPLGILALSLIAGAYIGEIFRSGIQSVERGQMEACRALSMSYG 147 Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF----ADLVSVGGTIINQTGQAI 364 + RL+++PQ +R ++P L +Q++ +K+SSL +G ++ VG TG Sbjct: 148 QGMRLIVIPQGIRRVLPALVNQFIGNVKDSSLVYFLGLLASEREIFRVGQDQAVVTGNLS 207 Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 ++L +F YL +++ + +N ++ ++ L ++ Sbjct: 208 PLLLAGLF-YLVITVPLTHLVNYIDVRLRLGKQ 239 >gi|148259697|ref|YP_001233824.1| polar amino acid ABC transporter, inner membrane subunit [Acidiphilium cryptum JF-5] gi|146401378|gb|ABQ29905.1| amino acid ABC transporter membrane protein, PAAT family [Acidiphilium cryptum JF-5] Length = 250 Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 43/128 (33%), Positives = 83/128 (64%), Gaps = 5/128 (3%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 + ++++AL +A++AE +R+G+ AVP+GQ+EAA +LG++ +A R ++L QA+R ++P Sbjct: 117 YGTVWVALGVVGSAYMAETMRAGIQAVPKGQVEAARSLGMSSAQAMRKIVLMQALRLMVP 176 Query: 326 PLTSQYLNLLKNSSLAVAVGFA----DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 PLT++ + L+K+SSL VG + DL G + N T I +++ YL +++ + Sbjct: 177 PLTNELIMLIKDSSLVFVVGLSAGQFDLTEFGRSTAN-TNVNITPLVVAGLGYLLITLPL 235 Query: 382 ALFMNRLN 389 ++ + R+ Sbjct: 236 SMLVRRME 243 >gi|225620108|ref|YP_002721365.1| ABC-type amino acid transport system, permease [Brachyspira hyodysenteriae WA1] gi|225214927|gb|ACN83661.1| HisM, ABC-type amino acid transport system, permease component [Brachyspira hyodysenteriae WA1] Length = 216 Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 40/133 (30%), Positives = 77/133 (57%), Gaps = 1/133 (0%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P F S I +A++ EI R+G+ ++ +GQ EA AL L++R+ ++LPQA+R + Sbjct: 85 PAFTSAAITFVLNYSAYLMEIFRAGIESIEKGQYEAGFALNLSYRQIMTRIILPQAVRRV 144 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 +PPL+++ +NL+K+++L + +G DL+ I+ + + + LI IYL + ++ Sbjct: 145 LPPLSNEAINLIKDTALVIVLGIGDLMLHARQILTRDYKLLP-FLIAAIIYLLFTSILVF 203 Query: 384 FMNRLNAKIALKE 396 +L K ++ Sbjct: 204 VFRQLEKKYVIRN 216 >gi|157691141|ref|YP_001485603.1| amino acid ABC transporter ATP-binding protein [Bacillus pumilus SAFR-032] gi|194015977|ref|ZP_03054592.1| L-cystine transport system permease protein TcyL [Bacillus pumilus ATCC 7061] gi|157679899|gb|ABV61043.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Bacillus pumilus SAFR-032] gi|194012332|gb|EDW21899.1| L-cystine transport system permease protein TcyL [Bacillus pumilus ATCC 7061] Length = 224 Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 63/222 (28%), Positives = 109/222 (49%), Gaps = 21/222 (9%) Query: 178 FPTLTMDTNAKIF------VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231 FPTL IF VF+ ++G+V +L ++ LYIS F Sbjct: 13 FPTLIQYLPITIFMAIVSMVFAIIIGVVFALITKNRIPVLYQ-----FAKLYISFFR--A 65 Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291 +PTLV + L ++F P L T ++ I LS +A++AEI R+ L + Sbjct: 66 VPTLVQLFL---IYFGLPQL-----FPAMTSMDALTAVIIGLSIKNSAYLAEIFRAALNS 117 Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 V GQ+EA +++G+T ++ ++ PQA+R+ IP + ++ LLK +SLA +G A++ + Sbjct: 118 VDEGQLEACLSVGMTRWQSYVRIIFPQAIRNAIPATGNTFIGLLKETSLAFTIGVAEMFA 177 Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393 G I + + E L +Y ++I+ + + KI+ Sbjct: 178 QGKMIASANYKYFETYLAVGIVYWVMTIIYSFLQDLFERKIS 219 >gi|154687483|ref|YP_001422644.1| YtmL [Bacillus amyloliquefaciens FZB42] gi|154353334|gb|ABS75413.1| YtmL [Bacillus amyloliquefaciens FZB42] Length = 240 Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 54/162 (33%), Positives = 88/162 (54%), Gaps = 19/162 (11%) Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY---TA 278 LYIS F G P +V + + + + P L I S + P LY A++ Y +A Sbjct: 59 LYISFFR--GTPIMVQL---FIVFYGIPALTALAGIDTSKMDP----LYAAIATYALSSA 109 Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338 A AEI+R G+ +V RGQ EAA ++GL + R ++LPQA+ P + + + LK++ Sbjct: 110 ARAAEIIRGGVNSVDRGQAEAAFSIGLNGGQTFRRIILPQALVQAFPNIGNMVIGFLKDT 169 Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380 SLA ++G D+ G T+I + ++E +Y+SLS++ Sbjct: 170 SLAFSIGVMDMSGRGQTLITSSNHSLE-------VYISLSVL 204 >gi|55377278|ref|YP_135128.1| glutamine-binding periplasmic protein of glutamine ABC transporter [Haloarcula marismortui ATCC 43049] gi|55230003|gb|AAV45422.1| glutamine-binding periplasmic protein of glutamine ABC transporter [Haloarcula marismortui ATCC 43049] Length = 226 Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 58/212 (27%), Positives = 102/212 (48%), Gaps = 33/212 (15%) Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTG---KALPLLYISTFLIFGLPTLVLIALKYQLHF 246 F F G + ++ + +R E+ G + PLL I L FGL Sbjct: 40 FAIGFPAG-AIEVYGSDRARRLVEQVGVVLRGTPLLVIIMILYFGL-------------- 84 Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306 S S F++ IAL +AA+ ++I R L +V GQ+EAA A+ ++ Sbjct: 85 -------------SVSSSAFVTATIALGLRSAAYQSQIFRGALQSVDDGQLEAARAVAMS 131 Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN--QTGQAI 364 +A R V++PQA+R +P +++ +LK++S+A+ +G +L++ G + Q+ A+ Sbjct: 132 RFEAIRHVVVPQALRRSVPGFQNEFTIVLKDTSIAIVIGIGELLTTGQNLYEGGQSTAAL 191 Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 EI L +Y L+ ++RL+ A+ E Sbjct: 192 EIFLAVSLVYFVLTFATNRSLDRLSDYYAVPE 223 >gi|190894983|ref|YP_001985276.1| putative amino acid ABC transporter permease [Rhizobium etli CIAT 652] gi|190700644|gb|ACE94726.1| probable amino acid ABC transporter, permease protein [Rhizobium etli CIAT 652] Length = 222 Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 48/128 (37%), Positives = 73/128 (57%), Gaps = 4/128 (3%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I L+ Y A +E R+ L ++ R Q++A +ALGL R V+LPQA+ IP L S Sbjct: 95 ITLTLYMGAITSETFRASLKSIGREQLDACVALGLPQRVQVVNVVLPQAVPRAIPTLLSN 154 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII----LIWMFIYLSLSIMIALFMN 386 ++L K S+L AVG ADL+ VG I N T + +E++ LI+ I L+ ++L Sbjct: 155 CVSLFKESALVSAVGMADLMFVGQNISNNTARPVEVLTVVALIYFVIAFPLTRAVSLMEG 214 Query: 387 RLNAKIAL 394 R+ K+A+ Sbjct: 215 RILKKLAI 222 >gi|168485585|ref|ZP_02710093.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae CDC1087-00] gi|183571168|gb|EDT91696.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae CDC1087-00] Length = 521 Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 39/109 (35%), Positives = 66/109 (60%) Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 +S T A++ EIVR G++AV +GQ EAA ALG+TH + R ++LPQ +R+I+P ++++ Sbjct: 384 VSINTGAYMTEIVRGGILAVDKGQFEAATALGMTHNQTMRKIVLPQVVRNILPATGNEFV 443 Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 +K++S+ + +L G T+ QT Q + I IY L+ + Sbjct: 444 INIKDTSVLNVISVVELYFSGNTVATQTYQYFQTFTIIAVIYFVLTFTV 492 Score = 37.4 bits (85), Expect = 3.7, Method: Compositional matrix adjust. Identities = 24/64 (37%), Positives = 31/64 (48%), Gaps = 10/64 (15%) Query: 96 TFWLAFSGMIPATIIGTLVGAGR---LSANK-------LVAWICRVYVEVFRNIPPLVVI 145 T ++ G I IIG +G R LS NK LV WI VY+E+FR P +V Sbjct: 300 TLLISIVGTITGLIIGLAIGVFRTAPLSENKVIYSLQKLVGWILNVYIEIFRGTPMIVQS 359 Query: 146 FFLY 149 +Y Sbjct: 360 MVIY 363 >gi|323142442|ref|ZP_08077263.1| ABC transporter, permease protein [Phascolarctobacterium sp. YIT 12067] gi|322413087|gb|EFY03985.1| ABC transporter, permease protein [Phascolarctobacterium sp. YIT 12067] Length = 214 Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 40/134 (29%), Positives = 76/134 (56%), Gaps = 1/134 (0%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P+F S +A AA+ EI R+G+ A+P GQ EAA LG+ + + R ++LPQ +R I Sbjct: 82 PDFESAIVAFVLNYAAYFCEIFRAGIQAIPAGQYEAAHTLGMNYVQTMRRIILPQVIRII 141 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 +PP++++ + L+K++SL + DL+ ++ + I+ +F YL ++++ L Sbjct: 142 LPPISNETITLVKDTSLVYVLAMNDLMRTARNLVQRDFSITPFIVAAVF-YLLATLILTL 200 Query: 384 FMNRLNAKIALKEK 397 RL + + ++ Sbjct: 201 VFERLEKRFSRYDQ 214 >gi|297559647|ref|YP_003678621.1| polar amino acid ABC transporter inner membrane subunit [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296844095|gb|ADH66115.1| polar amino acid ABC transporter, inner membrane subunit [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 224 Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 53/165 (32%), Positives = 89/165 (53%), Gaps = 27/165 (16%) Query: 191 VFSFVLGIVLSLFATRLS--------RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY 242 +FSFVLG++L+ A R+S + + ++ PL + F GL + + IAL Sbjct: 27 LFSFVLGVLLT--AMRVSPVPLLRGLATAYVEGIRSTPLTLVLLFCGLGLNSALGIALAD 84 Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302 + +D F I LS YTA F++E +R+G+ +P GQ+EAA + Sbjct: 85 SVAWDV-----------------FWWAVIGLSGYTACFVSESLRAGINTIPLGQVEAARS 127 Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347 LGLT + R++++PQA+R+++ PL S + L+KN+++A G Sbjct: 128 LGLTFTQNLRMIVIPQALRTVVGPLGSVLIALIKNTTVASVAGLG 172 >gi|148988205|ref|ZP_01819668.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae SP6-BS73] gi|148993994|ref|ZP_01823364.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae SP9-BS68] gi|148996854|ref|ZP_01824572.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae SP11-BS70] gi|149006411|ref|ZP_01830123.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae SP18-BS74] gi|168482691|ref|ZP_02707643.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae CDC1873-00] gi|168488141|ref|ZP_02712340.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae SP195] gi|168492631|ref|ZP_02716774.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae CDC3059-06] gi|168576830|ref|ZP_02722680.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae MLV-016] gi|169834409|ref|YP_001693956.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae Hungary19A-6] gi|182683418|ref|YP_001835165.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae CGSP14] gi|221231314|ref|YP_002510466.1| glutamine ABC transporter, glutamine-binding protein/permease protein [Streptococcus pneumoniae ATCC 700669] gi|225854025|ref|YP_002735537.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae JJA] gi|303255927|ref|ZP_07341957.1| glutamine ABC transporter, glutamine-binding protein/permease protein [Streptococcus pneumoniae BS455] gi|303259526|ref|ZP_07345503.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae SP-BS293] gi|303262389|ref|ZP_07348332.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae SP14-BS292] gi|303264806|ref|ZP_07350723.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae BS397] gi|303267362|ref|ZP_07353220.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae BS457] gi|303269680|ref|ZP_07355436.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae BS458] gi|307067096|ref|YP_003876062.1| amino acid ABC transporter/signal transduction system periplasmic domain-containing protein [Streptococcus pneumoniae AP200] gi|307126668|ref|YP_003878699.1| amino acid ABC transporter amino acid-binding protein/permeae [Streptococcus pneumoniae 670-6B] gi|147757429|gb|EDK64468.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae SP11-BS70] gi|147762188|gb|EDK69150.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae SP18-BS74] gi|147926669|gb|EDK77742.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae SP6-BS73] gi|147927583|gb|EDK78610.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae SP9-BS68] gi|168996911|gb|ACA37523.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae Hungary19A-6] gi|172043569|gb|EDT51615.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae CDC1873-00] gi|182628752|gb|ACB89700.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae CGSP14] gi|183573209|gb|EDT93737.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae SP195] gi|183576815|gb|EDT97343.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae CDC3059-06] gi|183577459|gb|EDT97987.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae MLV-016] gi|220673774|emb|CAR68274.1| glutamine ABC transporter, glutamine-binding protein/permease protein [Streptococcus pneumoniae ATCC 700669] gi|225724181|gb|ACO20034.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae JJA] gi|301801361|emb|CBW34046.1| glutamine ABC transporter, glutamine-binding protein/permease protein [Streptococcus pneumoniae INV200] gi|302597102|gb|EFL64218.1| glutamine ABC transporter, glutamine-binding protein/permease protein [Streptococcus pneumoniae BS455] gi|302636488|gb|EFL66980.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae SP14-BS292] gi|302639460|gb|EFL69918.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae SP-BS293] gi|302640777|gb|EFL71168.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae BS458] gi|302643095|gb|EFL73384.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae BS457] gi|302645673|gb|EFL75903.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae BS397] gi|306408633|gb|ADM84060.1| ABC-type amino acid transport/signal transduction systems, periplasmic component/domain protein [Streptococcus pneumoniae AP200] gi|306483730|gb|ADM90599.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae 670-6B] gi|332075296|gb|EGI85766.1| amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Streptococcus pneumoniae GA17570] gi|332076898|gb|EGI87360.1| amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Streptococcus pneumoniae GA17545] Length = 521 Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 39/109 (35%), Positives = 66/109 (60%) Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 +S T A++ EIVR G++AV +GQ EAA ALG+TH + R ++LPQ +R+I+P ++++ Sbjct: 384 VSINTGAYMTEIVRGGILAVDKGQFEAATALGMTHNQTMRKIVLPQVVRNILPATGNEFV 443 Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 +K++S+ + +L G T+ QT Q + I IY L+ + Sbjct: 444 INIKDTSVLNVISVVELYFSGNTVATQTYQYFQTFTIIAVIYFVLTFTV 492 >gi|15601791|ref|NP_233422.1| amino acid ABC transporter, permease protein [Vibrio cholerae O1 biovar eltor str. N16961] gi|121587149|ref|ZP_01676924.1| amino acid ABC transporter, permease protein [Vibrio cholerae 2740-80] gi|121726619|ref|ZP_01679855.1| amino acid ABC transporter, permease protein [Vibrio cholerae V52] gi|147672361|ref|YP_001215042.1| amino acid ABC transporter, permease protein [Vibrio cholerae O395] gi|153817671|ref|ZP_01970338.1| amino acid ABC transporter, permease protein [Vibrio cholerae NCTC 8457] gi|153821742|ref|ZP_01974409.1| amino acid ABC transporter, permease protein [Vibrio cholerae B33] gi|227812604|ref|YP_002812614.1| amino acid ABC transporter, permease protein [Vibrio cholerae M66-2] gi|229505827|ref|ZP_04395336.1| amino acid ABC transporter permease protein [Vibrio cholerae BX 330286] gi|229510318|ref|ZP_04399798.1| amino acid ABC transporter permease protein [Vibrio cholerae B33] gi|229517550|ref|ZP_04406995.1| amino acid ABC transporter permease protein [Vibrio cholerae RC9] gi|229605360|ref|YP_002876064.1| amino acid ABC transporter permease protein [Vibrio cholerae MJ-1236] gi|254850199|ref|ZP_05239549.1| amino acid ABC transporter [Vibrio cholerae MO10] gi|255746229|ref|ZP_05420176.1| amino acid ABC transporter permease protein [Vibrio cholera CIRS 101] gi|262158719|ref|ZP_06029833.1| amino acid ABC transporter permease protein [Vibrio cholerae INDRE 91/1] gi|298499807|ref|ZP_07009613.1| amino acid ABC transporter [Vibrio cholerae MAK 757] gi|9658483|gb|AAF96934.1| amino acid ABC transporter, permease protein [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121548588|gb|EAX58640.1| amino acid ABC transporter, permease protein [Vibrio cholerae 2740-80] gi|121630925|gb|EAX63305.1| amino acid ABC transporter, permease protein [Vibrio cholerae V52] gi|126511827|gb|EAZ74421.1| amino acid ABC transporter, permease protein [Vibrio cholerae NCTC 8457] gi|126520738|gb|EAZ77961.1| amino acid ABC transporter, permease protein [Vibrio cholerae B33] gi|146314744|gb|ABQ19284.1| amino acid ABC transporter, permease protein [Vibrio cholerae O395] gi|227011746|gb|ACP07957.1| amino acid ABC transporter, permease protein [Vibrio cholerae M66-2] gi|227015684|gb|ACP11893.1| amino acid ABC transporter, permease protein [Vibrio cholerae O395] gi|229345586|gb|EEO10559.1| amino acid ABC transporter permease protein [Vibrio cholerae RC9] gi|229352763|gb|EEO17703.1| amino acid ABC transporter permease protein [Vibrio cholerae B33] gi|229356178|gb|EEO21096.1| amino acid ABC transporter permease protein [Vibrio cholerae BX 330286] gi|229371846|gb|ACQ62268.1| amino acid ABC transporter permease protein [Vibrio cholerae MJ-1236] gi|254845904|gb|EET24318.1| amino acid ABC transporter [Vibrio cholerae MO10] gi|255735983|gb|EET91381.1| amino acid ABC transporter permease protein [Vibrio cholera CIRS 101] gi|262029599|gb|EEY48249.1| amino acid ABC transporter permease protein [Vibrio cholerae INDRE 91/1] gi|297541788|gb|EFH77839.1| amino acid ABC transporter [Vibrio cholerae MAK 757] Length = 298 Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 44/134 (32%), Positives = 75/134 (55%) Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317 G + + +S + + ++A+IAEIVR+GL +P+GQ EAA +LGL R V+ P Sbjct: 158 GPARLWENLLSGVLCIGLLSSAYIAEIVRAGLANIPQGQWEAADSLGLPTWGKYRYVIAP 217 Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377 Q + +I P L Q ++L+K++S+ + +L VG I N +G EI LI YL L Sbjct: 218 QVLTAITPALAGQTISLIKDTSIISLISIQELTFVGSEIANSSGLIFEIWLIVGAAYLVL 277 Query: 378 SIMIALFMNRLNAK 391 + +++ ++ + Sbjct: 278 CLTLSMLFKQVEKR 291 >gi|325063350|gb|ADY67040.1| amino acid ABC transporter, membrane spanning protein [Agrobacterium sp. H13-3] Length = 252 Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 51/167 (30%), Positives = 90/167 (53%), Gaps = 11/167 (6%) Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290 G+P L+LI Y F P+ G+ V P F+ + L Y AF++E+VR+G++ Sbjct: 74 GVPLLMLILWSY---FLVPLWT------GADV-PSFVIMLTTLVIYQGAFLSEVVRAGIV 123 Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 A+ GQM+AA ALG ++ A R ++LPQA+ ++IP + S ++ +K+++L + DL Sbjct: 124 ALGAGQMDAARALGHSYLGAMRFIILPQALYNMIPSMISTFVATIKDTTLGYVINVPDLT 183 Query: 351 SVGGTIINQ-TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 + NQ Q ++ LI +Y ++ + N + +IA + Sbjct: 184 FAASQVNNQLLTQPFQVFLILAVVYYAICWSLTYLANAVERRIAKRR 230 >gi|311898730|dbj|BAJ31138.1| putative glutamate ABC transporter permease protein [Kitasatospora setae KM-6054] Length = 275 Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 67/202 (33%), Positives = 103/202 (50%), Gaps = 40/202 (19%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTG--------KALPLLYISTFLIFGLPTLVLIALKY 242 V S VLG++L++ RLS H + +A+PLL +IF L T V A Sbjct: 82 VGSLVLGVLLAV--GRLSDHRPVRVACTAVVQFFRAMPLL----IMIFALYTAVFTA--- 132 Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302 +P +L + LS Y A AEI+RSG+ AVPRGQ EA A Sbjct: 133 -----QP----------------LWALVLGLSVYNGAVQAEIIRSGINAVPRGQGEAGYA 171 Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII-NQTG 361 LGL + LVLLPQ++R+++P + Q + LK++SL + + +L+ VG I N G Sbjct: 172 LGLRKTQVMTLVLLPQSVRAMLPAIIGQLVVTLKDTSLGYIITYPELLFVGRWIASNSDG 231 Query: 362 QA-IEIILIWMFIYLSLSIMIA 382 I +IL+ +Y+++ + ++ Sbjct: 232 YPYIPVILVITPLYIAMCLALS 253 Score = 40.8 bits (94), Expect = 0.34, Method: Compositional matrix adjust. Identities = 20/56 (35%), Positives = 34/56 (60%) Query: 103 GMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPI 158 G + + ++G L+ GRLS ++ V C V+ FR +P L++IF LY +V + P+ Sbjct: 80 GAVGSLVLGVLLAVGRLSDHRPVRVACTAVVQFFRAMPLLIMIFALYTAVFTAQPL 135 >gi|241895264|ref|ZP_04782560.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Weissella paramesenteroides ATCC 33313] gi|241871570|gb|EER75321.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Weissella paramesenteroides ATCC 33313] Length = 493 Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 42/132 (31%), Positives = 77/132 (58%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F++ IA+ +AA++AEI+RSG+ AVP GQ EAA +LG T + R ++LPQA+++I+P Sbjct: 359 FLAGAIAMFLNSAAYVAEIIRSGIQAVPTGQTEAARSLGFTKNQTMRYMILPQAIKNILP 418 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 L ++++ ++K S+ +G +L + + + ++I IY L+ I+ + Sbjct: 419 ALGNEFVTVIKEGSVVSVIGVGELTFQTSVVQGASFKPFIPLIITAAIYFILTFGISRLL 478 Query: 386 NRLNAKIALKEK 397 N K+ +K Sbjct: 479 NLFEKKLRKSDK 490 Score = 38.9 bits (89), Expect = 1.6, Method: Compositional matrix adjust. Identities = 22/67 (32%), Positives = 34/67 (50%) Query: 83 SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142 S YA + G + T LA G+ I+G L +LS+ K W+ Y+E R +P L Sbjct: 280 SKYAPYFVKGTLYTIGLAVIGVFFGIILGILFALMKLSSIKPFKWLASAYIEAVRGVPLL 339 Query: 143 VVIFFLY 149 + +F +Y Sbjct: 340 IQVFIVY 346 >gi|223933890|ref|ZP_03625854.1| polar amino acid ABC transporter, inner membrane subunit [Streptococcus suis 89/1591] gi|253751333|ref|YP_003024474.1| putative amino acid ABC transporter permease protein [Streptococcus suis SC84] gi|253753234|ref|YP_003026374.1| amino acid ABC transporter permease protein [Streptococcus suis P1/7] gi|253755057|ref|YP_003028197.1| amino acid ABC transporter permease protein [Streptococcus suis BM407] gi|330832340|ref|YP_004401165.1| polar amino acid ABC transporter inner membrane subunit [Streptococcus suis ST3] gi|223897448|gb|EEF63845.1| polar amino acid ABC transporter, inner membrane subunit [Streptococcus suis 89/1591] gi|251815622|emb|CAZ51208.1| putative amino acid ABC transporter permease protein [Streptococcus suis SC84] gi|251817521|emb|CAZ55265.1| putative amino acid ABC transporter permease protein [Streptococcus suis BM407] gi|251819479|emb|CAR45008.1| putative amino acid ABC transporter permease protein [Streptococcus suis P1/7] gi|292557906|gb|ADE30907.1| permease protein [Streptococcus suis GZ1] gi|319757618|gb|ADV69560.1| polar amino acid ABC transporter, inner membrane subunit [Streptococcus suis JS14] gi|329306563|gb|AEB80979.1| polar amino acid ABC transporter, inner membrane subunit [Streptococcus suis ST3] Length = 229 Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 52/167 (31%), Positives = 94/167 (56%), Gaps = 13/167 (7%) Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL-HFDKPV 250 F +LG++L+ FA R T I ++ G P +V I + + + HF P Sbjct: 30 FGSILGVLLA-FAQRSKYKVLAWTAN------IYVWIFRGTPMIVQIMIAFAMTHFVAPT 82 Query: 251 LGQFNFIGGSTVS-PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309 +G TV + I +S + A+++E VR+G+ AVP+GQ+EAA +LG+ ++ Sbjct: 83 FQ----LGILTVDLTRLIPGIIVISMNSGAYVSETVRAGINAVPKGQLEAAYSLGIRPKQ 138 Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356 A R V++PQA+++I+P L ++++ ++K+SSL +G +L + T+ Sbjct: 139 AMRYVIMPQAIKNILPALGNEFVTIVKDSSLLSTIGVMELWNGAQTV 185 >gi|254456396|ref|ZP_05069825.1| amino acid ABC transporter, permease protein [Candidatus Pelagibacter sp. HTCC7211] gi|207083398|gb|EDZ60824.1| amino acid ABC transporter, permease protein [Candidatus Pelagibacter sp. HTCC7211] Length = 480 Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 35/82 (42%), Positives = 59/82 (71%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IA+S + AA++AE++R GL A+PRGQ +AA +LG+ + K LV+LPQA++ +IP + + Sbjct: 352 IAISLFEAAYVAEVIRGGLQALPRGQYDAAKSLGMGYWKMHILVILPQALKLVIPGIANT 411 Query: 331 YLNLLKNSSLAVAVGFADLVSV 352 +L L+K++ L VG ++V + Sbjct: 412 FLALVKDTPLIFVVGLLEIVGM 433 >gi|145301209|ref|YP_001144050.1| ABC-type polar amino acid transporter, permease protein [Aeromonas salmonicida subsp. salmonicida A449] gi|142853981|gb|ABO92302.1| ABC-type polar amino acid transporter, permease protein [Aeromonas salmonicida subsp. salmonicida A449] Length = 222 Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 59/176 (33%), Positives = 100/176 (56%), Gaps = 15/176 (8%) Query: 178 FPTLT--MDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235 FP L + T ++ ++ FVL +VLSL + R F L +LYIS F G P L Sbjct: 13 FPILLKYLGTTMEMALWGFVLALVLSL-TLAIVRVFRIPVIHWLAMLYISFFR--GTPLL 69 Query: 236 V-LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294 V L L Y L PV F+G F + + L+ + AA++AE +R+ ++ + + Sbjct: 70 VQLFLLYYGLPQLFPV-----FVGMDA----FTAAIVGLTLHFAAYMAESIRAAILGIHK 120 Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 QMEAA+++G++ +A R ++LPQA R P L + +++++K++SLA +G A+++ Sbjct: 121 SQMEAALSIGMSRYQAMRRIILPQAARIATPSLMNYFIDMIKSTSLAFTLGVAEIM 176 >gi|123443061|ref|YP_001007035.1| glutamine ABC transporter permease protein [Yersinia enterocolitica subsp. enterocolitica 8081] gi|122090022|emb|CAL12880.1| putative glutamine transport system permease [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 218 Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 42/129 (32%), Positives = 76/129 (58%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + + + + A+IAEI R ++++ G EA +ALGL+ R R V+ P A+R ++P Sbjct: 89 FSAAVVTIMINSGAYIAEITRGAVLSIHNGFREAGLALGLSKRDTLRYVIAPLALRRMLP 148 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PL +Q++ +K++SL + +G A+L G II +A+EI IYL +++ ++ + Sbjct: 149 PLGNQWIVSIKDTSLFIVIGVAELTRQGQEIIAGNFRAMEIWSAVAVIYLIITLALSFVL 208 Query: 386 NRLNAKIAL 394 RL K+ + Sbjct: 209 RRLERKLKI 217 >gi|322377150|ref|ZP_08051642.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus sp. M334] gi|321281863|gb|EFX58871.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus sp. M334] Length = 521 Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 39/109 (35%), Positives = 66/109 (60%) Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 +S T A++ EIVR G++AV +GQ EAA ALG+TH + R ++LPQ +R+I+P ++++ Sbjct: 384 VSINTGAYMTEIVRGGILAVDKGQFEAATALGMTHNQTMRKIVLPQVVRNILPATGNEFV 443 Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 +K++S+ + +L G T+ QT Q + I IY L+ + Sbjct: 444 INIKDTSVLNVISVVELYFSGNTVATQTYQYFQTFTIIAVIYFVLTFTV 492 >gi|307708017|ref|ZP_07644487.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus mitis NCTC 12261] gi|307615935|gb|EFN95138.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus mitis NCTC 12261] Length = 490 Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 39/109 (35%), Positives = 66/109 (60%) Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 +S T A++ EIVR G++AV +GQ EAA ALG+TH + R ++LPQ +R+I+P ++++ Sbjct: 353 VSINTGAYMTEIVRGGILAVDKGQFEAATALGMTHNQTMRKIVLPQVVRNILPATGNEFV 412 Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 +K++S+ + +L G T+ QT Q + I IY L+ + Sbjct: 413 INIKDTSVLNVISVVELYFSGNTVATQTYQYFQTFTIIAVIYFVLTFTV 461 >gi|291458315|ref|ZP_06597705.1| ABC transporter, permease protein, polar amino acid uptake family [Oribacterium sp. oral taxon 078 str. F0262] gi|291418848|gb|EFE92567.1| ABC transporter, permease protein, polar amino acid uptake family [Oribacterium sp. oral taxon 078 str. F0262] Length = 262 Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 56/218 (25%), Positives = 106/218 (48%), Gaps = 30/218 (13%) Query: 178 FPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVL 237 +P ++ +F + L ++ +FA KT L + I+ F L ++ Sbjct: 32 YPGISAGKRRSMFDIHYFLEVLPKVFA---------KTPVTLEIALIAAFFSLLLGMIIA 82 Query: 238 IALKYQLHFDKPVLGQF-NFIGGSTVSPEFMSLYIALSCYTA------------------ 278 + Y+L P F +F+ G+ + + Y ++ Y+A Sbjct: 83 VIAYYRLPLLYPAARAFVSFMRGTPIVAQLYFFYFGVAVYSALVRDMTPVTAVSLVLSLN 142 Query: 279 --AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 AF++E +R+ L++V GQ EAA++LG+++ + R +++PQA+R +PPL + ++NL+K Sbjct: 143 VGAFMSESIRAALLSVDDGQREAALSLGMSNLQIVRRIIIPQALRVALPPLFNDFINLIK 202 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374 SSLA +G D++ T ++T + EI M +Y Sbjct: 203 ASSLAFMLGVPDIMGAARTEGSRTYRYFEIYGAVMVVY 240 >gi|229492701|ref|ZP_04386502.1| ABC-type amino acid transport system, permease component [Rhodococcus erythropolis SK121] gi|229320360|gb|EEN86180.1| ABC-type amino acid transport system, permease component [Rhodococcus erythropolis SK121] Length = 318 Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 46/131 (35%), Positives = 76/131 (58%), Gaps = 1/131 (0%) Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308 P + QF + F+ I L+ AA++AEIVR+G+ +V GQ EA++ALG+T Sbjct: 136 PFVHQFVHFDMQDLQAAFLFAVIGLALNEAAYMAEIVRAGIASVNEGQTEASVALGMTWG 195 Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA-DLVSVGGTIINQTGQAIEII 367 + R +LPQAMR IIPP ++ ++LLK +SL AV + +L I + I ++ Sbjct: 196 QTMRRTVLPQAMRVIIPPTGNELISLLKTTSLVTAVPLSTELYGRARDISGANFEPIPLL 255 Query: 368 LIWMFIYLSLS 378 ++ + YL+++ Sbjct: 256 MVAVTWYLAMT 266 >gi|90962595|ref|YP_536511.1| amino acid ABC transporter permease [Lactobacillus salivarius UCC118] gi|90821789|gb|ABE00428.1| Amino acid ABC transporter, permease protein [Lactobacillus salivarius UCC118] Length = 231 Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 52/183 (28%), Positives = 94/183 (51%), Gaps = 30/183 (16%) Query: 191 VFSFVLGIVLSLFAT--RLSR------------HFHEKTGKALPLLYISTFLIFGLPTLV 236 + SF+LG++L+L R+S+ F+ ++ PLL + FGLP L Sbjct: 25 IVSFILGLILALVTALIRISQTKGPFLVIKAIFRFYVWLFRSTPLLVQLFIVYFGLPYLK 84 Query: 237 LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296 + L + G + P F S I S T A+ +E +R+ + ++P+GQ Sbjct: 85 IKGLAPE---------------GIKLDP-FTSGIIVFSLNTGAYASETIRAAITSIPKGQ 128 Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356 EAA ++G+TH++A +++PQA R +PPL + ++ L+K++SLA ++ ++ V I Sbjct: 129 WEAAASIGMTHKQALMRIIIPQAARVSLPPLANSFIGLVKDTSLAASITIVEMFEVSQQI 188 Query: 357 INQ 359 + Sbjct: 189 AAE 191 >gi|330718659|ref|ZP_08313259.1| amino acid ABC transporter [Leuconostoc fallax KCTC 3537] Length = 414 Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 61/187 (32%), Positives = 102/187 (54%), Gaps = 18/187 (9%) Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFN 255 LG VL+L +LSR F KA+ +Y+ + G P LV + + F V+G N Sbjct: 231 LGTVLALM--KLSRAF---ILKAIANIYVE--YVRGTPLLVQA---FMVFFGTQVIG-LN 279 Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315 F + +A+ +AA++ EI+RSG+ +V GQMEAA +LGL++ K R V+ Sbjct: 280 L-------SAFAAGALAMGLNSAAYVTEIIRSGINSVSAGQMEAARSLGLSNGKTMRYVI 332 Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375 LPQA+++I+P L ++++ ++K S+ +G +L+ G I + + +LI IY Sbjct: 333 LPQAVKNILPALGNEFVTVIKEGSVVSVIGVGELMFQTGVIQGASFKPFFPLLITSVIYF 392 Query: 376 SLSIMIA 382 L+ I+ Sbjct: 393 VLTFSIS 399 >gi|328552037|gb|AEB22529.1| YxeN [Bacillus amyloliquefaciens TA208] Length = 224 Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 66/214 (30%), Positives = 111/214 (51%), Gaps = 17/214 (7%) Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239 TL M A VF+ + G++L+L H+ L +YIS F G+PTLV + Sbjct: 23 TLVMAVAA--MVFAVIGGLILALITKNRIPVLHQ-----LSKVYISFFR--GVPTLVQLF 73 Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299 L Y + P L F G S ++ + I LS AA++AEI R+ L +V GQ+EA Sbjct: 74 LIY---YGLPQL----FPGMSKMT-ALTAAIIGLSLKNAAYLAEIFRAALNSVDEGQLEA 125 Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359 +++G+T +A R ++ PQA+R+ +P + ++ LLK +SLA +G ++ + G + Sbjct: 126 CLSVGMTKSQAYRRIIFPQAIRNALPATGNTFIGLLKETSLAFTLGVMEMFAQGKMYASG 185 Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393 + E L +Y L+I+ ++ + L I+ Sbjct: 186 NLKYFETYLAVAIMYWILTIIYSVLQDLLERAIS 219 >gi|323496925|ref|ZP_08101953.1| amino acid ABC transporter permease protein [Vibrio sinaloensis DSM 21326] gi|323317999|gb|EGA70982.1| amino acid ABC transporter permease protein [Vibrio sinaloensis DSM 21326] Length = 223 Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 55/170 (32%), Positives = 97/170 (57%), Gaps = 15/170 (8%) Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALK 241 TM+ +FS +L ++L+ R F L LYIS F G P LV + L Sbjct: 22 TMEMATWGLIFSLILSVILANI-----RVFKVPVLDQLSQLYISFFR--GTPLLVQLFL- 73 Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301 L++ P + F ++ G F + I L+ + AA++AE +R+ +I + R QMEA++ Sbjct: 74 --LYYGLPQI--FPWLVGLDA---FSAAVIGLTLHFAAYMAESIRAAIIGIDRSQMEASL 126 Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 ++G+T +A R V+LPQA R +P L + +++++K++SLA +G A++++ Sbjct: 127 SVGMTTSQAMRRVILPQATRVALPSLMNYFIDMIKSTSLAFTLGVAEIMA 176 >gi|194446396|ref|YP_002041217.1| glutamine-binding periplasmic protein/glutamine transport system permease protein [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194405059|gb|ACF65281.1| glutamine-binding periplasmic protein/glutamine transport system permease protein [Salmonella enterica subsp. enterica serovar Newport str. SL254] Length = 222 Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 62/207 (29%), Positives = 110/207 (53%), Gaps = 18/207 (8%) Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251 F +LG VL+L R+S + + L YIS F G P LIA + +++ P Sbjct: 32 FGLLLGFVLALM--RMSPLWPVRW---LARFYISIFR--GTP---LIAQLFMIYYGLP-- 79 Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311 QF G + P + I LS TAA+ +E +R+ + A+ +GQ EAA ++G+T + Sbjct: 80 -QF----GIELDP-IPAAMIGLSLNTAAYTSETLRAAISAIDKGQWEAAASIGMTPWQTL 133 Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371 R V+LPQA R +PPL++ +++L+K++SLA + +L I ++T + + L Sbjct: 134 RRVILPQAARVALPPLSNSFISLVKDTSLAATIQVPELFRQAQLITSRTLEVFTMYLAAS 193 Query: 372 FIYLSLSIMIALFMNRLNAKIALKEKK 398 IY ++ +++ N ++ +E++ Sbjct: 194 LIYWVMATVLSALQNYFENQLNRQERE 220 Score = 37.4 bits (85), Expect = 3.9, Method: Compositional matrix adjust. Identities = 29/103 (28%), Positives = 48/103 (46%), Gaps = 8/103 (7%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G V T L+ GM ++G ++ R+S V W+ R Y+ +FR P + +F + Sbjct: 15 LLKGAVFTLQLSIGGMFFGLLLGFVLALMRMSPLWPVRWLARFYISIFRGTPLIAQLFMI 74 Query: 149 YKSV----LSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187 Y + + + PIP I G+ LN + TL +A Sbjct: 75 YYGLPQFGIELDPIPAAMI----GLSLNTAAYTSETLRAAISA 113 >gi|123441155|ref|YP_001005143.1| ABC transporter, inner-membrane component [Yersinia enterocolitica subsp. enterocolitica 8081] gi|122088116|emb|CAL10904.1| ABC transporter, inner-membrane component [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 219 Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 53/176 (30%), Positives = 95/176 (53%), Gaps = 18/176 (10%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 V F +G+V+ L + H + G+ +YIS F G P L + L + L + Sbjct: 31 VAGFFIGVVIYLMESG-----HSRLGRGFARIYISLFR--GTPVLAQVLLCFYLPGE--- 80 Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 +G S P +++ +AL+ TAA+ ++I+RSG A+P GQ+EAA GL+ R+A Sbjct: 81 ------LGLSL--PGYLAAVLALTLNTAAYQSQILRSGFNAIPPGQLEAAAMCGLSPRQA 132 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 + +PQ +R +P L S+ ++++K S++ + DL+ VG + + T + +E+ Sbjct: 133 LWHIQIPQVLRLTLPSLISELIDVIKASAVVSVIAITDLMRVGQQLASATYRPLEV 188 >gi|226323073|ref|ZP_03798591.1| hypothetical protein COPCOM_00845 [Coprococcus comes ATCC 27758] gi|225208640|gb|EEG90994.1| hypothetical protein COPCOM_00845 [Coprococcus comes ATCC 27758] Length = 229 Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 60/196 (30%), Positives = 106/196 (54%), Gaps = 25/196 (12%) Query: 195 VLGIVLSLFATRLSRHFHEKTGKALPLL------YISTFLIFGLPTLVLIALKYQLHFDK 248 ++G+VL F + R ++KTGK L LL YI+ +I G P +V + + Y Sbjct: 37 LIGVVLG-FLLAIVRSTYDKTGK-LKLLNLICQIYIT--VIRGTPVVVQLLIIY------ 86 Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308 F VS +++ +A ++A++AEI RSG++AV GQ EA +LG +R Sbjct: 87 -----FVIFASVDVSKTIVAI-LAFGMNSSAYVAEIFRSGIMAVDNGQFEAGRSLGFNYR 140 Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368 + +++PQA ++++P L ++++ LLK +S+A + DL G I ++T A+ ++ Sbjct: 141 QTMIYIIMPQAFKNVLPALGNEFIVLLKETSVAGYIALQDLTKGGDIIRSRTYDALMPLM 200 Query: 369 IWMFIYLSLSIMIALF 384 IYL +M+ +F Sbjct: 201 AVAIIYL---VMVMIF 213 >gi|200390875|ref|ZP_03217486.1| L-cystine transport system permease protein TcyB [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|199603320|gb|EDZ01866.1| L-cystine transport system permease protein TcyB [Salmonella enterica subsp. enterica serovar Virchow str. SL491] Length = 222 Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 58/207 (28%), Positives = 109/207 (52%), Gaps = 18/207 (8%) Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251 F +LG VL+L R+S + P+L+++ F I LIA + +++ P Sbjct: 32 FGLLLGFVLALM--RMSPLW--------PVLWLARFYISIFRGTPLIAQLFMIYYGLP-- 79 Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311 QF G + P + I LS TAA+ +E +R+ + A+ +GQ EAA ++G+T + Sbjct: 80 -QF----GIELDP-IPAAMIGLSLNTAAYTSETLRAAISAIDKGQWEAAASIGMTPWQTL 133 Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371 R +LPQA R +PPL++ +++L+K++SLA + +L I ++T + + L Sbjct: 134 RRAILPQAARVALPPLSNSFISLVKDTSLAATIQVPELFRQAQLITSRTLEVFTMYLAAS 193 Query: 372 FIYLSLSIMIALFMNRLNAKIALKEKK 398 IY ++ +++ N ++ +E++ Sbjct: 194 LIYWVMATVLSALQNYFENQLNRQERE 220 Score = 37.4 bits (85), Expect = 4.5, Method: Compositional matrix adjust. Identities = 29/103 (28%), Positives = 48/103 (46%), Gaps = 8/103 (7%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G V T L+ GM ++G ++ R+S V W+ R Y+ +FR P + +F + Sbjct: 15 LLKGAVFTLQLSIGGMFFGLLLGFVLALMRMSPLWPVLWLARFYISIFRGTPLIAQLFMI 74 Query: 149 YKSV----LSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187 Y + + + PIP I G+ LN + TL +A Sbjct: 75 YYGLPQFGIELDPIPAAMI----GLSLNTAAYTSETLRAAISA 113 >gi|323186798|gb|EFZ72118.1| L-cystine transport system permease protein tcyB [Escherichia coli RN587/1] Length = 222 Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 62/207 (29%), Positives = 109/207 (52%), Gaps = 18/207 (8%) Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251 F +LG +L+L RLS + + L YIS F G P LIA + +++ P Sbjct: 32 FGLLLGFILALM--RLSPIWPVRW---LARFYISIFR--GTP---LIAQLFMIYYGLP-- 79 Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311 QF G + P S I LS TAA+ AE +R+ + ++ +GQ EAA ++G+T + Sbjct: 80 -QF----GIELDP-IPSAMIGLSLNTAAYAAETLRAAISSIDKGQWEAAASIGMTPWQTM 133 Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371 R +LPQA R +PPL++ +++L+K++SLA + +L I ++T + + L Sbjct: 134 RRAILPQAARVALPPLSNSFISLVKDTSLAATIQVPELFRQAQLITSRTLEVFTMYLAAS 193 Query: 372 FIYLSLSIMIALFMNRLNAKIALKEKK 398 IY ++ +++ N ++ +E++ Sbjct: 194 LIYWIMATVLSTLQNHFENQLNRQERE 220 Score = 37.0 bits (84), Expect = 5.1, Method: Compositional matrix adjust. Identities = 28/97 (28%), Positives = 45/97 (46%), Gaps = 8/97 (8%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G T L+ GM ++G ++ RLS V W+ R Y+ +FR P + +F + Sbjct: 15 LLKGAGYTLQLSIGGMFFGLLLGFILALMRLSPIWPVRWLARFYISIFRGTPLIAQLFMI 74 Query: 149 YKSV----LSVLPIPDHSIVLPFGMFLNNRGLSFPTL 181 Y + + + PIP I G+ LN + TL Sbjct: 75 YYGLPQFGIELDPIPSAMI----GLSLNTAAYAAETL 107 >gi|167625395|ref|YP_001675689.1| polar amino acid ABC transporter inner membrane subunit [Shewanella halifaxensis HAW-EB4] gi|167355417|gb|ABZ78030.1| polar amino acid ABC transporter, inner membrane subunit [Shewanella halifaxensis HAW-EB4] Length = 226 Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 41/122 (33%), Positives = 75/122 (61%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IA + A+I+EI+R+G+ AV +GQMEAA +LGL+ + V+LPQA+++I+P L ++ Sbjct: 101 IAFGLNSGAYISEIIRAGIQAVDKGQMEAARSLGLSQAATMKEVILPQAIKNILPSLGNE 160 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++ LLK +++ +G DL+ G I ++T + + IYL L+ + ++R Sbjct: 161 FIVLLKETAVIGFIGGVDLMRAGEIIRSRTFEDSVPLFTCALIYLLLTYIFTFILSRFET 220 Query: 391 KI 392 ++ Sbjct: 221 RL 222 >gi|293567831|ref|ZP_06679172.1| amino acid ABC transporter, amino acid-binding/permease protein [Enterococcus faecium E1071] gi|291589416|gb|EFF21223.1| amino acid ABC transporter, amino acid-binding/permease protein [Enterococcus faecium E1071] Length = 530 Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 66/237 (27%), Positives = 113/237 (47%), Gaps = 38/237 (16%) Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLF------ATRLSRHFHEKTGKALPLL 222 MFL GL+ + T V LG+++ +F L+R F +K G AL + Sbjct: 300 MFLRGAGLTLFIALIGT-----VVGTTLGLLIGVFRSVPESGNALTRFF-QKIGNALLSI 353 Query: 223 YISTFLIFGLPTLVL-------IALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSC 275 Y+ F G P +V +AL + + ++ + +L+I +S Sbjct: 354 YVEVFR--GTPMMVQAMVIFYGLALAFGISLNRTI----------------AALFI-VSL 394 Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335 T A++ EIVR G+ AV GQ EAA A+G+TH + R V++PQ +R+I+P ++++ + Sbjct: 395 NTGAYMTEIVRGGIFAVDEGQFEAAQAIGMTHGQTMRKVVIPQVLRNILPATGNEFVINI 454 Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 K++++ +G ADL G + Q + I IYL ++ I + + KI Sbjct: 455 KDTAVLSVIGVADLFFQGNSASGANFQFFQTFTIVGIIYLVMTFTITRILRAVEKKI 511 >gi|258615113|ref|ZP_05712883.1| amino acid ABC transporter, amino acid-binding/permease protein [Enterococcus faecium DO] gi|289565909|ref|ZP_06446349.1| amino acid ABC transporter [Enterococcus faecium D344SRF] gi|293556866|ref|ZP_06675427.1| amino acid ABC transporter, amino acid-binding/permease protein [Enterococcus faecium E1039] gi|293563614|ref|ZP_06678058.1| amino acid ABC transporter, amino acid-binding/permease protein [Enterococcus faecium E1162] gi|294614606|ref|ZP_06694510.1| amino acid ABC transporter, amino acid-binding/permease protein [Enterococcus faecium E1636] gi|294621215|ref|ZP_06700400.1| amino acid ABC transporter, amino acid-binding/permease protein [Enterococcus faecium U0317] gi|314938843|ref|ZP_07846114.1| ABC transporter, permease protein [Enterococcus faecium TX0133a04] gi|314943648|ref|ZP_07850402.1| ABC transporter, permease protein [Enterococcus faecium TX0133C] gi|314949084|ref|ZP_07852444.1| ABC transporter, permease protein [Enterococcus faecium TX0082] gi|314952177|ref|ZP_07855195.1| ABC transporter, permease protein [Enterococcus faecium TX0133A] gi|314991849|ref|ZP_07857306.1| ABC transporter, permease protein [Enterococcus faecium TX0133B] gi|314996560|ref|ZP_07861597.1| ABC transporter, permease protein [Enterococcus faecium TX0133a01] gi|289162282|gb|EFD10142.1| amino acid ABC transporter [Enterococcus faecium D344SRF] gi|291592508|gb|EFF24113.1| amino acid ABC transporter, amino acid-binding/permease protein [Enterococcus faecium E1636] gi|291599211|gb|EFF30243.1| amino acid ABC transporter, amino acid-binding/permease protein [Enterococcus faecium U0317] gi|291600950|gb|EFF31241.1| amino acid ABC transporter, amino acid-binding/permease protein [Enterococcus faecium E1039] gi|291604414|gb|EFF33904.1| amino acid ABC transporter, amino acid-binding/permease protein [Enterococcus faecium E1162] gi|313589301|gb|EFR68146.1| ABC transporter, permease protein [Enterococcus faecium TX0133a01] gi|313593554|gb|EFR72399.1| ABC transporter, permease protein [Enterococcus faecium TX0133B] gi|313595709|gb|EFR74554.1| ABC transporter, permease protein [Enterococcus faecium TX0133A] gi|313597685|gb|EFR76530.1| ABC transporter, permease protein [Enterococcus faecium TX0133C] gi|313641854|gb|EFS06434.1| ABC transporter, permease protein [Enterococcus faecium TX0133a04] gi|313644500|gb|EFS09080.1| ABC transporter, permease protein [Enterococcus faecium TX0082] Length = 530 Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 66/237 (27%), Positives = 113/237 (47%), Gaps = 38/237 (16%) Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLF------ATRLSRHFHEKTGKALPLL 222 MFL GL+ + T V LG+++ +F L+R F +K G AL + Sbjct: 300 MFLRGAGLTLFIALIGT-----VVGTTLGLLIGVFRSVPESGNALTRFF-QKIGNALLSI 353 Query: 223 YISTFLIFGLPTLVL-------IALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSC 275 Y+ F G P +V +AL + + ++ + +L+I +S Sbjct: 354 YVEVFR--GTPMMVQAMVIFYGLALAFGISLNRTI----------------AALFI-VSL 394 Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335 T A++ EIVR G+ AV GQ EAA A+G+TH + R V++PQ +R+I+P ++++ + Sbjct: 395 NTGAYMTEIVRGGIFAVDEGQFEAAQAIGMTHGQTMRKVVIPQVLRNILPATGNEFVINI 454 Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 K++++ +G ADL G + Q + I IYL ++ I + + KI Sbjct: 455 KDTAVLSVIGVADLFFQGNSASGANFQFFQTFTIVGIIYLVMTFTITRILRAVEKKI 511 >gi|170769381|ref|ZP_02903834.1| L-cystine ABC transporter, permease protein [Escherichia albertii TW07627] gi|170121705|gb|EDS90636.1| L-cystine ABC transporter, permease protein [Escherichia albertii TW07627] Length = 222 Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 62/207 (29%), Positives = 109/207 (52%), Gaps = 18/207 (8%) Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251 F +LG +L+L RLS + + L YIS F G P LIA + +++ P Sbjct: 32 FGLLLGFILALM--RLSPVWPVRW---LARFYISIFR--GTP---LIAQLFMIYYGLP-- 79 Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311 QF G + P S I LS TAA+ AE +R+ + ++ +GQ EAA ++G+T + Sbjct: 80 -QF----GIELDP-IPSAMIGLSLNTAAYAAETLRAAISSIDKGQWEAAASIGMTPWQTM 133 Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371 R +LPQA R +PPL++ +++L+K++SLA + +L I ++T + + L Sbjct: 134 RRAILPQAARVALPPLSNSFISLVKDTSLAATIQVPELFRQAQLITSRTLEVFTMYLAAS 193 Query: 372 FIYLSLSIMIALFMNRLNAKIALKEKK 398 IY ++ +++ N ++ +E++ Sbjct: 194 LIYWIMATVLSTLQNHFENQLNRQERE 220 Score = 37.0 bits (84), Expect = 5.4, Method: Compositional matrix adjust. Identities = 28/97 (28%), Positives = 45/97 (46%), Gaps = 8/97 (8%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G T L+ GM ++G ++ RLS V W+ R Y+ +FR P + +F + Sbjct: 15 LLKGAGYTLQLSIGGMFFGLLLGFILALMRLSPVWPVRWLARFYISIFRGTPLIAQLFMI 74 Query: 149 YKSV----LSVLPIPDHSIVLPFGMFLNNRGLSFPTL 181 Y + + + PIP I G+ LN + TL Sbjct: 75 YYGLPQFGIELDPIPSAMI----GLSLNTAAYAAETL 107 >gi|296110461|ref|YP_003620842.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opinefamily [Leuconostoc kimchii IMSNU 11154] gi|295831992|gb|ADG39873.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opinefamily [Leuconostoc kimchii IMSNU 11154] Length = 491 Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 42/128 (32%), Positives = 78/128 (60%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + +A+ +AA++AEI+RSG+ +V GQ EAA +LGL+ KA R ++LPQA+++I+P Sbjct: 360 FAAGALAMGLNSAAYVAEIIRSGINSVNYGQTEAARSLGLSKGKAMRYIILPQAVKNILP 419 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 L ++++ ++K S+ +G +L+ G + + + +LI FIY L+ I+ + Sbjct: 420 ALGNEFVTIIKEGSVVSVIGVGELMFQTGVVQGASFKPFFPLLITSFIYFVLTFGISRAL 479 Query: 386 NRLNAKIA 393 ++A Sbjct: 480 GYAEKRMA 487 >gi|302525505|ref|ZP_07277847.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces sp. AA4] gi|302434400|gb|EFL06216.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces sp. AA4] Length = 294 Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 57/174 (32%), Positives = 91/174 (52%), Gaps = 38/174 (21%) Query: 191 VFSFVLGIVLSLF------ATRLSRH--------FHEKTGKALPLLYISTFLIFGLPTLV 236 V +F LG VL++ A RLS H F + +A+PLL + +GLPTL Sbjct: 70 VKAFALGAVLAIVFGAVFAAGRLSDHAWVRGVCTFVVEFFRAIPLLILMFLFYYGLPTL- 128 Query: 237 LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296 G SP F ++ + L+ Y + +AE+ R+G++A+P+GQ Sbjct: 129 ----------------------GVDTSPLF-AVVLGLTLYNGSVLAEVFRAGILALPKGQ 165 Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 EAA ALG+ + VLLPQA+R+++P + SQ + LLK+++L V + +L+ Sbjct: 166 SEAAYALGMRKTQVMFTVLLPQALRAMLPTIISQLVVLLKDTALGFLVTYPELL 219 Score = 39.3 bits (90), Expect = 0.99, Method: Compositional matrix adjust. Identities = 27/73 (36%), Positives = 39/73 (53%), Gaps = 4/73 (5%) Query: 103 GMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSV--LSVLPIPD 160 G + A + G + AGRLS + V +C VE FR IP L+++F Y + L V P Sbjct: 76 GAVLAIVFGAVFAAGRLSDHAWVRGVCTFVVEFFRAIPLLILMFLFYYGLPTLGVDTSPL 135 Query: 161 HSIVLPFGMFLNN 173 ++VL G+ L N Sbjct: 136 FAVVL--GLTLYN 146 >gi|16129865|ref|NP_416428.1| inner membrane protein, predicted transporter subunit: membrane component of ABC superfamily [Escherichia coli str. K-12 substr. MG1655] gi|24113295|ref|NP_707805.1| putative transport system permease protein (former yecC) [Shigella flexneri 2a str. 301] gi|26248184|ref|NP_754224.1| amino-acid ABC transporter permease YecS [Escherichia coli CFT073] gi|30063362|ref|NP_837533.1| putative transport system permease protein (former yecC) [Shigella flexneri 2a str. 2457T] gi|74311736|ref|YP_310155.1| putative transport system permease [Shigella sonnei Ss046] gi|89108753|ref|AP_002533.1| predicted transporter subunit [Escherichia coli str. K-12 substr. W3110] gi|91211137|ref|YP_541123.1| putative transport system permease [Escherichia coli UTI89] gi|110805891|ref|YP_689411.1| putative transport system permease [Shigella flexneri 5 str. 8401] gi|117624060|ref|YP_852973.1| putative transport system permease protein [Escherichia coli APEC O1] gi|157161390|ref|YP_001458708.1| L-cystine ABC transporter, permease protein [Escherichia coli HS] gi|170019744|ref|YP_001724698.1| polar amino acid ABC transporter, inner membrane subunit [Escherichia coli ATCC 8739] gi|170081566|ref|YP_001730886.1| ABC transporter membrane protein [Escherichia coli str. K-12 substr. DH10B] gi|170681367|ref|YP_001743325.1| L-cystine ABC transporter permease [Escherichia coli SMS-3-5] gi|188494690|ref|ZP_03001960.1| L-cystine ABC transporter, permease protein [Escherichia coli 53638] gi|191168290|ref|ZP_03030083.1| L-cystine ABC transporter, permease protein [Escherichia coli B7A] gi|191173310|ref|ZP_03034840.1| L-cystine ABC transporter, permease protein [Escherichia coli F11] gi|193071132|ref|ZP_03052056.1| L-cystine ABC transporter, permease protein [Escherichia coli E110019] gi|194434972|ref|ZP_03067215.1| L-cystine ABC transporter, permease protein [Shigella dysenteriae 1012] gi|194439561|ref|ZP_03071634.1| L-cystine ABC transporter, permease protein [Escherichia coli 101-1] gi|209919340|ref|YP_002293424.1| putative amino acid ABC transporter permease [Escherichia coli SE11] gi|218554502|ref|YP_002387415.1| putative ABC transporter permease [Escherichia coli IAI1] gi|218558776|ref|YP_002391689.1| transporter subunit: permease component of ABC superfamily transporter [Escherichia coli S88] gi|218689911|ref|YP_002398123.1| putative ABC transporter permease [Escherichia coli ED1a] gi|218695525|ref|YP_002403192.1| putative transporter subunit: permease component of ABC superfamily transporter [Escherichia coli 55989] gi|218699518|ref|YP_002407147.1| putative ABC transporter permease [Escherichia coli IAI39] gi|218705413|ref|YP_002412932.1| putative ABC transporter permease [Escherichia coli UMN026] gi|227885655|ref|ZP_04003460.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Escherichia coli 83972] gi|237705874|ref|ZP_04536355.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA] gi|238901127|ref|YP_002926923.1| putative transporter subunit: membrane component of ABC superfamily [Escherichia coli BW2952] gi|253773129|ref|YP_003035960.1| polar amino acid ABC transporter inner membrane subunit [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|256017884|ref|ZP_05431749.1| polar amino acid ABC transporter, inner membrane subunit [Shigella sp. D9] gi|256022424|ref|ZP_05436289.1| polar amino acid ABC transporter, inner membrane subunit [Escherichia sp. 4_1_40B] gi|260855898|ref|YP_003229789.1| putative transporter subunit [Escherichia coli O26:H11 str. 11368] gi|260868510|ref|YP_003234912.1| putative transporter subunit [Escherichia coli O111:H- str. 11128] gi|293405404|ref|ZP_06649396.1| inner membrane amino-acid ABC transporter permease yecS [Escherichia coli FVEC1412] gi|293410277|ref|ZP_06653853.1| inner membrane amino-acid ABC transporter permease yecS [Escherichia coli B354] gi|293415229|ref|ZP_06657872.1| inner membrane amino-acid ABC transporter permease yecS [Escherichia coli B185] gi|293446300|ref|ZP_06662722.1| inner membrane amino-acid ABC transporter permease yecS [Escherichia coli B088] gi|298381048|ref|ZP_06990647.1| inner membrane amino-acid ABC transporter permease yecS [Escherichia coli FVEC1302] gi|300818658|ref|ZP_07098866.1| ABC transporter, permease protein [Escherichia coli MS 107-1] gi|300822310|ref|ZP_07102451.1| ABC transporter, permease protein [Escherichia coli MS 119-7] gi|300899172|ref|ZP_07117450.1| ABC transporter, permease protein [Escherichia coli MS 198-1] gi|300904805|ref|ZP_07122632.1| ABC transporter, permease protein [Escherichia coli MS 84-1] gi|300917360|ref|ZP_07134029.1| ABC transporter, permease protein [Escherichia coli MS 115-1] gi|300925011|ref|ZP_07140934.1| ABC transporter, permease protein [Escherichia coli MS 182-1] gi|300928949|ref|ZP_07144453.1| ABC transporter, permease protein [Escherichia coli MS 187-1] gi|300935894|ref|ZP_07150850.1| ABC transporter, permease protein [Escherichia coli MS 21-1] gi|300951542|ref|ZP_07165376.1| ABC transporter, permease protein [Escherichia coli MS 116-1] gi|300956566|ref|ZP_07168847.1| ABC transporter, permease protein [Escherichia coli MS 175-1] gi|300982287|ref|ZP_07175997.1| ABC transporter, permease protein [Escherichia coli MS 200-1] gi|300993931|ref|ZP_07180606.1| ABC transporter, permease protein [Escherichia coli MS 45-1] gi|301029370|ref|ZP_07192466.1| ABC transporter, permease protein [Escherichia coli MS 196-1] gi|301305259|ref|ZP_07211356.1| ABC transporter, permease protein [Escherichia coli MS 124-1] gi|301327708|ref|ZP_07220914.1| ABC transporter, permease protein [Escherichia coli MS 78-1] gi|306814258|ref|ZP_07448424.1| putative transporter subunit [Escherichia coli NC101] gi|307314175|ref|ZP_07593785.1| polar amino acid ABC transporter, inner membrane subunit [Escherichia coli W] gi|309795972|ref|ZP_07690385.1| ABC transporter, permease protein [Escherichia coli MS 145-7] gi|331647511|ref|ZP_08348603.1| inner membrane amino-acid ABC transporter permease protein YecS [Escherichia coli M605] gi|331653325|ref|ZP_08354330.1| inner membrane amino-acid ABC transporter permease protein YecS [Escherichia coli M718] gi|331657963|ref|ZP_08358925.1| inner membrane amino-acid ABC transporter permease protein YecS [Escherichia coli TA206] gi|331663416|ref|ZP_08364326.1| inner membrane amino-acid ABC transporter permease protein YecS [Escherichia coli TA143] gi|331668612|ref|ZP_08369460.1| inner membrane amino-acid ABC transporter permease protein YecS [Escherichia coli TA271] gi|331673436|ref|ZP_08374204.1| inner membrane amino-acid ABC transporter permease protein YecS [Escherichia coli TA280] gi|331677803|ref|ZP_08378478.1| inner membrane amino-acid ABC transporter permease protein YecS [Escherichia coli H591] gi|331683470|ref|ZP_08384071.1| inner membrane amino-acid ABC transporter permease protein YecS [Escherichia coli H299] gi|84027923|sp|P0AFT3|YECS_ECOL6 RecName: Full=Inner membrane amino-acid ABC transporter permease protein yecS gi|84027924|sp|P0AFT2|YECS_ECOLI RecName: Full=Inner membrane amino-acid ABC transporter permease protein yecS gi|84027925|sp|P0AFT4|YECS_SHIFL RecName: Full=Inner membrane amino-acid ABC transporter permease protein yecS gi|26108588|gb|AAN80791.1|AE016762_44 Hypothetical amino-acid ABC transporter permease protein yecS [Escherichia coli CFT073] gi|1736577|dbj|BAA15738.1| predicted transporter subunit [Escherichia coli str. K12 substr. W3110] gi|1788226|gb|AAC74985.1| inner membrane protein, predicted transporter subunit: membrane component of ABC superfamily [Escherichia coli str. K-12 substr. MG1655] gi|24052302|gb|AAN43512.1| putative transport system permease protein (former yecC) [Shigella flexneri 2a str. 301] gi|30041614|gb|AAP17342.1| putative transport system permease protein (former yecC) [Shigella flexneri 2a str. 2457T] gi|73855213|gb|AAZ87920.1| putative transport system permease protein (former yecC) [Shigella sonnei Ss046] gi|91072711|gb|ABE07592.1| putative transport system permease protein [Escherichia coli UTI89] gi|110615439|gb|ABF04106.1| putative transport system permease protein [Shigella flexneri 5 str. 8401] gi|115513184|gb|ABJ01259.1| putative transport system permease protein [Escherichia coli APEC O1] gi|157067070|gb|ABV06325.1| L-cystine ABC transporter, permease protein [Escherichia coli HS] gi|169754672|gb|ACA77371.1| polar amino acid ABC transporter, inner membrane subunit [Escherichia coli ATCC 8739] gi|169889401|gb|ACB03108.1| predicted transporter subunit: membrane component of ABC superfamily [Escherichia coli str. K-12 substr. DH10B] gi|170519085|gb|ACB17263.1| L-cystine ABC transporter, permease protein [Escherichia coli SMS-3-5] gi|188489889|gb|EDU64992.1| L-cystine ABC transporter, permease protein [Escherichia coli 53638] gi|190901662|gb|EDV61418.1| L-cystine ABC transporter, permease protein [Escherichia coli B7A] gi|190906427|gb|EDV66036.1| L-cystine ABC transporter, permease protein [Escherichia coli F11] gi|192955527|gb|EDV86006.1| L-cystine ABC transporter, permease protein [Escherichia coli E110019] gi|194416807|gb|EDX32933.1| L-cystine ABC transporter, permease protein [Shigella dysenteriae 1012] gi|194421470|gb|EDX37484.1| L-cystine ABC transporter, permease protein [Escherichia coli 101-1] gi|209912599|dbj|BAG77673.1| putative amino acid ABC transporter permease component [Escherichia coli SE11] gi|218352257|emb|CAU98013.1| putative transporter subunit: permease component of ABC superfamily transporter [Escherichia coli 55989] gi|218361270|emb|CAQ98854.1| putative transporter subunit: permease component of ABC superfamily transporter [Escherichia coli IAI1] gi|218365545|emb|CAR03272.1| putative transporter subunit: permease component of ABC superfamily transporter [Escherichia coli S88] gi|218369504|emb|CAR17271.1| putative transporter subunit: permease component of ABC superfamily transporter [Escherichia coli IAI39] gi|218427475|emb|CAR08249.1| putative transporter subunit: permease component of ABC superfamily transporter [Escherichia coli ED1a] gi|218432510|emb|CAR13403.1| putative transporter subunit: permease component of ABC superfamily transporter [Escherichia coli UMN026] gi|222033659|emb|CAP76400.1| Inner membrane amino-acid ABC transporter permease [Escherichia coli LF82] gi|226900631|gb|EEH86890.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA] gi|227837228|gb|EEJ47694.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Escherichia coli 83972] gi|238863239|gb|ACR65237.1| predicted transporter subunit: membrane component of ABC superfamily [Escherichia coli BW2952] gi|253324173|gb|ACT28775.1| polar amino acid ABC transporter, inner membrane subunit [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|257754547|dbj|BAI26049.1| predicted transporter subunit [Escherichia coli O26:H11 str. 11368] gi|257764866|dbj|BAI36361.1| predicted transporter subunit [Escherichia coli O111:H- str. 11128] gi|260448965|gb|ACX39387.1| polar amino acid ABC transporter, inner membrane subunit [Escherichia coli DH1] gi|281178980|dbj|BAI55310.1| putative amino acid ABC transporter permease component [Escherichia coli SE15] gi|281601360|gb|ADA74344.1| putative transport system permease protein [Shigella flexneri 2002017] gi|284921831|emb|CBG34904.1| putative cystine ABC transporter, permease protein [Escherichia coli 042] gi|291323130|gb|EFE62558.1| inner membrane amino-acid ABC transporter permease yecS [Escherichia coli B088] gi|291427612|gb|EFF00639.1| inner membrane amino-acid ABC transporter permease yecS [Escherichia coli FVEC1412] gi|291432877|gb|EFF05856.1| inner membrane amino-acid ABC transporter permease yecS [Escherichia coli B185] gi|291470745|gb|EFF13229.1| inner membrane amino-acid ABC transporter permease yecS [Escherichia coli B354] gi|294489589|gb|ADE88345.1| L-cystine ABC transporter, permease protein [Escherichia coli IHE3034] gi|298278490|gb|EFI20004.1| inner membrane amino-acid ABC transporter permease yecS [Escherichia coli FVEC1302] gi|299877725|gb|EFI85936.1| ABC transporter, permease protein [Escherichia coli MS 196-1] gi|300307264|gb|EFJ61784.1| ABC transporter, permease protein [Escherichia coli MS 200-1] gi|300316629|gb|EFJ66413.1| ABC transporter, permease protein [Escherichia coli MS 175-1] gi|300357209|gb|EFJ73079.1| ABC transporter, permease protein [Escherichia coli MS 198-1] gi|300403273|gb|EFJ86811.1| ABC transporter, permease protein [Escherichia coli MS 84-1] gi|300406432|gb|EFJ89970.1| ABC transporter, permease protein [Escherichia coli MS 45-1] gi|300415406|gb|EFJ98716.1| ABC transporter, permease protein [Escherichia coli MS 115-1] gi|300418830|gb|EFK02141.1| ABC transporter, permease protein [Escherichia coli MS 182-1] gi|300449217|gb|EFK12837.1| ABC transporter, permease protein [Escherichia coli MS 116-1] gi|300458913|gb|EFK22406.1| ABC transporter, permease protein [Escherichia coli MS 21-1] gi|300463103|gb|EFK26596.1| ABC transporter, permease protein [Escherichia coli MS 187-1] gi|300525193|gb|EFK46262.1| ABC transporter, permease protein [Escherichia coli MS 119-7] gi|300528830|gb|EFK49892.1| ABC transporter, permease protein [Escherichia coli MS 107-1] gi|300839465|gb|EFK67225.1| ABC transporter, permease protein [Escherichia coli MS 124-1] gi|300845752|gb|EFK73512.1| ABC transporter, permease protein [Escherichia coli MS 78-1] gi|305852417|gb|EFM52868.1| putative transporter subunit [Escherichia coli NC101] gi|306906144|gb|EFN36662.1| polar amino acid ABC transporter, inner membrane subunit [Escherichia coli W] gi|307553932|gb|ADN46707.1| putative amino acid transport protein ABC superfamily [Escherichia coli ABU 83972] gi|307626605|gb|ADN70909.1| putative transporter subunit [Escherichia coli UM146] gi|308120422|gb|EFO57684.1| ABC transporter, permease protein [Escherichia coli MS 145-7] gi|309702213|emb|CBJ01529.1| putative cystine ABC transporter, permease protein [Escherichia coli ETEC H10407] gi|312946510|gb|ADR27337.1| putative transporter subunit [Escherichia coli O83:H1 str. NRG 857C] gi|313650135|gb|EFS14548.1| L-cystine transport system permease protein tcyB [Shigella flexneri 2a str. 2457T] gi|315061218|gb|ADT75545.1| predicted transporter subunit: membrane component of ABC superfamily [Escherichia coli W] gi|315136555|dbj|BAJ43714.1| inner membrane amino-acid ABC transporter permease [Escherichia coli DH1] gi|315257251|gb|EFU37219.1| ABC transporter, permease protein [Escherichia coli MS 85-1] gi|315286628|gb|EFU46061.1| ABC transporter, permease protein [Escherichia coli MS 110-3] gi|315290284|gb|EFU49662.1| ABC transporter, permease protein [Escherichia coli MS 153-1] gi|315296501|gb|EFU55798.1| ABC transporter, permease protein [Escherichia coli MS 16-3] gi|315617859|gb|EFU98457.1| L-cystine transport system permease protein tcyB [Escherichia coli 3431] gi|320176078|gb|EFW51146.1| Cystine ABC transporter, permease protein [Shigella dysenteriae CDC 74-1112] gi|320178180|gb|EFW53157.1| Cystine ABC transporter, permease protein [Shigella boydii ATCC 9905] gi|320194370|gb|EFW69001.1| Cystine ABC transporter, permease protein [Escherichia coli WV_060327] gi|320198612|gb|EFW73212.1| Cystine ABC transporter, permease protein [Escherichia coli EC4100B] gi|323152749|gb|EFZ39021.1| L-cystine transport system permease protein tcyB [Escherichia coli EPECa14] gi|323165286|gb|EFZ51074.1| L-cystine transport system permease protein tcyB [Shigella sonnei 53G] gi|323180831|gb|EFZ66371.1| L-cystine transport system permease protein tcyB [Escherichia coli 1180] gi|323186306|gb|EFZ71656.1| L-cystine transport system permease protein tcyB [Escherichia coli 1357] gi|323378205|gb|ADX50473.1| polar amino acid ABC transporter, inner membrane subunit [Escherichia coli KO11] gi|323937193|gb|EGB33473.1| His/Glu/Gln/Arg/opine family protein amino ABC transporter [Escherichia coli E1520] gi|323940419|gb|EGB36610.1| His/Glu/Gln/Arg/opine family protein amino ABC transporter [Escherichia coli E482] gi|323948201|gb|EGB44189.1| His/Glu/Gln/Arg/opine family protein amino ABC transporter [Escherichia coli H120] gi|323952413|gb|EGB48286.1| His/Glu/Gln/Arg/opine family protein amino ABC transporter [Escherichia coli H252] gi|323956315|gb|EGB52058.1| His/Glu/Gln/Arg/opine family protein amino ABC transporter [Escherichia coli H263] gi|323961967|gb|EGB57566.1| His/Glu/Gln/Arg/opine family protein amino ABC transporter [Escherichia coli H489] gi|323968335|gb|EGB63742.1| His/Glu/Gln/Arg/opine family protein amino ABC transporter [Escherichia coli M863] gi|323972719|gb|EGB67920.1| His/Glu/Gln/Arg/opine family protein amino ABC transporter [Escherichia coli TA007] gi|323977901|gb|EGB72987.1| His/Glu/Gln/Arg/opine family protein amino ABC transporter [Escherichia coli TW10509] gi|324007277|gb|EGB76496.1| ABC transporter, permease protein [Escherichia coli MS 57-2] gi|324013510|gb|EGB82729.1| ABC transporter, permease protein [Escherichia coli MS 60-1] gi|324017954|gb|EGB87173.1| ABC transporter, permease protein [Escherichia coli MS 117-3] gi|324118972|gb|EGC12861.1| His/Glu/Gln/Arg/opine family protein amino ABC transporter [Escherichia coli E1167] gi|327253049|gb|EGE64703.1| L-cystine transport system permease protein tcyB [Escherichia coli STEC_7v] gi|330911726|gb|EGH40236.1| cystine ABC transporter, permease protein [Escherichia coli AA86] gi|331043235|gb|EGI15373.1| inner membrane amino-acid ABC transporter permease protein YecS [Escherichia coli M605] gi|331049423|gb|EGI21495.1| inner membrane amino-acid ABC transporter permease protein YecS [Escherichia coli M718] gi|331056211|gb|EGI28220.1| inner membrane amino-acid ABC transporter permease protein YecS [Escherichia coli TA206] gi|331059215|gb|EGI31192.1| inner membrane amino-acid ABC transporter permease protein YecS [Escherichia coli TA143] gi|331063806|gb|EGI35717.1| inner membrane amino-acid ABC transporter permease protein YecS [Escherichia coli TA271] gi|331069634|gb|EGI41021.1| inner membrane amino-acid ABC transporter permease protein YecS [Escherichia coli TA280] gi|331074263|gb|EGI45583.1| inner membrane amino-acid ABC transporter permease protein YecS [Escherichia coli H591] gi|331079685|gb|EGI50882.1| inner membrane amino-acid ABC transporter permease protein YecS [Escherichia coli H299] gi|332089652|gb|EGI94754.1| L-cystine transport system permease protein tcyB [Shigella boydii 5216-82] gi|332095438|gb|EGJ00459.1| L-cystine transport system permease protein tcyB [Shigella dysenteriae 155-74] gi|332101263|gb|EGJ04609.1| L-cystine ABC transporter [Shigella sp. D9] Length = 222 Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 62/207 (29%), Positives = 109/207 (52%), Gaps = 18/207 (8%) Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251 F +LG +L+L RLS + + L YIS F G P LIA + +++ P Sbjct: 32 FGLLLGFILALM--RLSPIWPVRW---LARFYISIFR--GTP---LIAQLFMIYYGLP-- 79 Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311 QF G + P S I LS TAA+ AE +R+ + ++ +GQ EAA ++G+T + Sbjct: 80 -QF----GIELDP-IPSAMIGLSLNTAAYAAETLRAAISSIDKGQWEAAASIGMTPWQTM 133 Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371 R +LPQA R +PPL++ +++L+K++SLA + +L I ++T + + L Sbjct: 134 RRAILPQAARVALPPLSNSFISLVKDTSLAATIQVPELFRQAQLITSRTLEVFTMYLAAS 193 Query: 372 FIYLSLSIMIALFMNRLNAKIALKEKK 398 IY ++ +++ N ++ +E++ Sbjct: 194 LIYWIMATVLSTLQNHFENQLNRQERE 220 Score = 37.0 bits (84), Expect = 6.0, Method: Compositional matrix adjust. Identities = 28/97 (28%), Positives = 45/97 (46%), Gaps = 8/97 (8%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G T L+ GM ++G ++ RLS V W+ R Y+ +FR P + +F + Sbjct: 15 LLKGAGYTLQLSIGGMFFGLLLGFILALMRLSPIWPVRWLARFYISIFRGTPLIAQLFMI 74 Query: 149 YKSV----LSVLPIPDHSIVLPFGMFLNNRGLSFPTL 181 Y + + + PIP I G+ LN + TL Sbjct: 75 YYGLPQFGIELDPIPSAMI----GLSLNTAAYAAETL 107 >gi|330718493|ref|ZP_08313093.1| ABC-type amino acid transport system, permease component [Leuconostoc fallax KCTC 3537] Length = 211 Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 47/129 (36%), Positives = 75/129 (58%), Gaps = 2/129 (1%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F S + L+ YT+AFIAE VR+G+ ++ GQME A A GL++ +A ++LPQA +P Sbjct: 84 FWSGTLGLTLYTSAFIAETVRAGIQSIDSGQMEGARANGLSYGQAMSRIILPQAFVVALP 143 Query: 326 PLTSQYLNLLKNSS-LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 L +Q++NL+KNSS LA GF D++ I ++ +YL +++ ++ + Sbjct: 144 SLANQFINLVKNSSILAFVAGF-DIMYQANVIAGLNFDPFNTYIVAGILYLIITLPLSYY 202 Query: 385 MNRLNAKIA 393 M L K A Sbjct: 203 MQHLEKKSA 211 Score = 40.0 bits (92), Expect = 0.59, Method: Compositional matrix adjust. Identities = 22/63 (34%), Positives = 33/63 (52%) Query: 87 TAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIF 146 + L GF T + ++ + I+GTL + NK ++ YVE+FRNIP LV+ Sbjct: 10 STFLSGFGYTLLASLIALVGSMILGTLFAILEILPNKALSIFGHTYVEIFRNIPLLVITM 69 Query: 147 FLY 149 F Y Sbjct: 70 FFY 72 >gi|298502248|ref|YP_003724188.1| amino acid ABC superfamily transporter membrane protein [Streptococcus pneumoniae TCH8431/19A] gi|298237843|gb|ADI68974.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus pneumoniae TCH8431/19A] Length = 507 Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 39/109 (35%), Positives = 66/109 (60%) Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 +S T A++ EIVR G++AV +GQ EAA ALG+TH + R ++LPQ +R+I+P ++++ Sbjct: 370 VSINTGAYMTEIVRGGILAVDKGQFEAATALGMTHNQTMRKIVLPQVVRNILPATGNEFV 429 Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 +K++S+ + +L G T+ QT Q + I IY L+ + Sbjct: 430 INIKDTSVLNVISVVELYFSGNTVATQTYQYFQTFTIIAVIYFVLTFTV 478 >gi|239834093|ref|ZP_04682421.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium LMG 3301] gi|239822156|gb|EEQ93725.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium LMG 3301] Length = 226 Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 40/126 (31%), Positives = 76/126 (60%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + I + A+ +EI+R+ + AVP+GQ EAA ++G++ R+A +LPQA R+ +P Sbjct: 89 FPAAVIGFTLSVGAYSSEIIRAVISAVPKGQWEAAYSIGMSWRQALSRTILPQATRTAVP 148 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PL++ +++L+K++SLA A+ +L I+ T + + + + IYL +S +++ Sbjct: 149 PLSNSFISLVKDTSLAAAITVPELFQSAQRIVATTYEPLILYIEAALIYLVMSSVLSALQ 208 Query: 386 NRLNAK 391 RL + Sbjct: 209 VRLERR 214 >gi|237737432|ref|ZP_04567913.1| amino acid ABC transporter, permease [Fusobacterium mortiferum ATCC 9817] gi|229421294|gb|EEO36341.1| amino acid ABC transporter, permease [Fusobacterium mortiferum ATCC 9817] Length = 208 Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 60/202 (29%), Positives = 111/202 (54%), Gaps = 19/202 (9%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 VFS LG++LSL R+S++ G + I T++ G P L+ + + +++ PV Sbjct: 24 VFSLPLGVILSL--GRISKNSLLNNG-----IQIYTWIFRGTPLLLQL---FFVYYGLPV 73 Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 +G T+SP + + YTA F EI R ++ + +GQ EAA LG+ + + Sbjct: 74 IG-------ITLSPFTAAALTFVINYTAYF-CEIFRGSILGIDKGQYEAAKVLGMNYWQT 125 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370 + +++PQA+ + +PPL ++ + L+K++SL A+G A+++ I+ + +I +I Sbjct: 126 MKRIIIPQALITALPPLGNEAIALIKDTSLISALGMAEILRNSREIVTRD-FSITPFIIC 184 Query: 371 MFIYLSLSIMIALFMNRLNAKI 392 IYL LS ++ +F R+ K+ Sbjct: 185 AAIYLILSTVVVIFFKRMEKKV 206 >gi|325686791|gb|EGD28816.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK72] Length = 521 Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 40/106 (37%), Positives = 65/106 (61%) Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 +S T A+++EIVR G+ AV +GQ EAA ALG+TH + R ++LPQ +R+I+P ++++ Sbjct: 383 VSINTGAYMSEIVRGGIFAVDKGQFEAATALGMTHGQTMRKIVLPQVVRNILPATGNEFV 442 Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378 +K++S+ + +L G TI QT Q + I IY L+ Sbjct: 443 INIKDTSVLNVISVVELYFSGNTIATQTYQYFQTFTIIAVIYFVLT 488 Score = 38.1 bits (87), Expect = 2.8, Method: Compositional matrix adjust. Identities = 28/88 (31%), Positives = 40/88 (45%), Gaps = 11/88 (12%) Query: 96 TFWLAFSGMIPATIIGTLVGAGRL---SANKLVA-------WICRVYVEVFRNIPPLVVI 145 T ++ +G I IIG L+G R S NKL+A W VY+E+FR P +V Sbjct: 299 TLLISITGTIAGLIIGLLIGVYRTAPASKNKLLASLQKIFGWFLNVYIEIFRGTPMIVQS 358 Query: 146 FFLYKSVLSVLPIP-DHSIVLPFGMFLN 172 +Y I D +I F + +N Sbjct: 359 MVIYYGTAQAFGISIDRTIAAIFIVSIN 386 >gi|307319923|ref|ZP_07599346.1| polar amino acid ABC transporter, inner membrane subunit [Sinorhizobium meliloti AK83] gi|306894463|gb|EFN25226.1| polar amino acid ABC transporter, inner membrane subunit [Sinorhizobium meliloti AK83] Length = 549 Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 55/150 (36%), Positives = 84/150 (56%), Gaps = 15/150 (10%) Query: 195 VLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL---IFGLPTLVLIALKYQLHFDKPVL 251 VL I+L L + H + PL S F+ I G+P LV++ L+ P+ Sbjct: 354 VLAIILGLLT--FGGYLHRRH----PLAIGSEFVVDTIRGIPMLVIV-----LYVGLPLS 402 Query: 252 GQF-NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 G + G P M +A++ +A++AEI RSG+ A+P GQ+EAA ++GL + Sbjct: 403 GALKDATQGVLDPPNLMRGIVAMALAYSAYLAEIFRSGINAIPIGQIEAARSIGLNRWQT 462 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340 RLV+LPQA R IIPPL ++ + +LK++SL Sbjct: 463 ARLVVLPQAFRIIIPPLGNELIAILKDTSL 492 >gi|261753640|ref|ZP_05997349.1| polar amino acid ABC transporter [Brucella suis bv. 3 str. 686] gi|261743393|gb|EEY31319.1| polar amino acid ABC transporter [Brucella suis bv. 3 str. 686] Length = 250 Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 40/126 (31%), Positives = 78/126 (61%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + I+ + A+ +EI+R+ + +VP+GQ EAA ++G++ R+A +LPQA R+ +P Sbjct: 113 FPAALISFTLNIGAYSSEIIRAVISSVPKGQWEAAYSIGMSWRQALIRTILPQATRTAVP 172 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PL++ +++L+K++SLA A+ +L I+ T + + + + IYL+LS +++ Sbjct: 173 PLSNTFISLIKDTSLAAAITVPELFQSAQRIVATTYEPLILYIEAALIYLALSSILSALQ 232 Query: 386 NRLNAK 391 RL + Sbjct: 233 VRLERR 238 >gi|256370356|ref|YP_003107867.1| amino acid ABC transporter, permease protein [Brucella microti CCM 4915] gi|256000519|gb|ACU48918.1| amino acid ABC transporter, permease protein [Brucella microti CCM 4915] Length = 240 Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 48/168 (28%), Positives = 90/168 (53%), Gaps = 8/168 (4%) Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279 PL +IS+ + + I + Y + P +G PE + IAL+ + ++ Sbjct: 50 PLRWISSAYVEWFRNIPFIVVLYLFFYGLPFMG--------VRLPESIVGTIALAFFASS 101 Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339 + AEI+R ++AVP+GQMEAA A+G+++ + ++ PQ +R ++PP T+ ++++K +S Sbjct: 102 YFAEIIRGAILAVPKGQMEAARAIGMSYFQGLYEIVAPQTVRLLLPPSTNTSISMVKETS 161 Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387 + + A+L G + +T EI L IY ++ + A M+R Sbjct: 162 VLSTITVAELTYQGLVMQGETFAPFEIFLTTAAIYWMITAIFAYLMHR 209 >gi|120406977|ref|YP_956806.1| polar amino acid ABC transporter inner membrane subunit [Mycobacterium vanbaalenii PYR-1] gi|119959795|gb|ABM16800.1| amino acid ABC transporter substrate-binding protein, PAAT family / amino acid ABC transporter membrane protein, PAAT family [Mycobacterium vanbaalenii PYR-1] Length = 598 Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 64/211 (30%), Positives = 106/211 (50%), Gaps = 20/211 (9%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 + +LG+ L++ SR I T + GLP +V+I L Sbjct: 388 IIGLILGMALAIAGISKSRWLRWPA-------RIYTDIFRGLPEVVIILLIG-------- 432 Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 LG +G T + F AL AA++ EI RSG+ +V GQ+EA+ ALG ++ + Sbjct: 433 LGVGPVVGHLTGNNPFPLGIAALGLMAAAYVGEIFRSGIQSVDPGQLEASRALGFSYPTS 492 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF----ADLVSVGGTIINQTGQAIEI 366 RLV++PQ +R ++P L +Q+++LLK SSL +G +L VG + QTG + Sbjct: 493 MRLVVVPQGVRRVLPALMNQFISLLKASSLVYFLGLIANQRELFQVGRDLNAQTGNLSPL 552 Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 + +F YL+L+I + +N ++ ++ K Sbjct: 553 VAAGLF-YLALTIPLTHLVNFIDTRLRRGRK 582 Score = 36.2 bits (82), Expect = 8.5, Method: Compositional matrix adjust. Identities = 20/71 (28%), Positives = 35/71 (49%), Gaps = 3/71 (4%) Query: 91 VGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYK 150 G NT L + I I+G + +S ++ + W R+Y ++FR +P +V+I + Sbjct: 374 TGLPNTLILTVAASIIGLILGMALAIAGISKSRWLRWPARIYTDIFRGLPEVVIILLIG- 432 Query: 151 SVLSVLPIPDH 161 L V P+ H Sbjct: 433 --LGVGPVVGH 441 >gi|283833896|ref|ZP_06353637.1| glutamine ABC transporter, permease protein [Citrobacter youngae ATCC 29220] gi|291070567|gb|EFE08676.1| glutamine ABC transporter, permease protein [Citrobacter youngae ATCC 29220] Length = 219 Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 58/198 (29%), Positives = 108/198 (54%), Gaps = 12/198 (6%) Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256 G+V+ L A +R F + L++I +I G P +V + Y F P+ FN Sbjct: 33 GLVIGL-AAGFARTFGGWIANHVALVFIE--VIRGTPIVVQVMFIY---FALPM--AFND 84 Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316 + + P F + + + + A+IAEI R ++++ +G EA +ALGL+ + R V+L Sbjct: 85 L---RIDP-FSAAVVTIMINSGAYIAEITRGAVLSIHKGFSEAGLALGLSRTETIRHVIL 140 Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376 P A+R ++PPL +Q++ +K++SL + +G A+L G II +A+EI YL Sbjct: 141 PLALRRMLPPLGNQWIISIKDTSLFIVIGVAELTRQGQEIIAGNFRALEIWSAVAVFYLI 200 Query: 377 LSIMIALFMNRLNAKIAL 394 ++++++ + RL ++ + Sbjct: 201 ITLVLSFILRRLERRMKI 218 >gi|257870153|ref|ZP_05649806.1| polar amino acid ABC transporter [Enterococcus gallinarum EG2] gi|257804317|gb|EEV33139.1| polar amino acid ABC transporter [Enterococcus gallinarum EG2] Length = 223 Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 54/163 (33%), Positives = 81/163 (49%), Gaps = 14/163 (8%) Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290 G+P LVL+ L L+F P P + I S ++AFI EI R + Sbjct: 67 GVPALVLLFL---LYFGLPY-----------QLPALTAAIICFSLTSSAFIGEIYRGSIA 112 Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 V RGQ +AA ALGL+ K RL++LPQA R +P L++ ++LLK +SLA + D+ Sbjct: 113 GVDRGQWDAAYALGLSFSKTLRLIILPQAFRISVPALSNVAMDLLKGTSLAAMITIPDIF 172 Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393 + +T + + ++ IY L I I +RL + A Sbjct: 173 QKAKIVGGRTFDYMSMYVLVAIIYWLLCIGIEALQHRLEKRFA 215 >gi|111657046|ref|ZP_01407843.1| hypothetical protein SpneT_02001722 [Streptococcus pneumoniae TIGR4] Length = 507 Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 39/109 (35%), Positives = 66/109 (60%) Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 +S T A++ EIVR G++AV +GQ EAA ALG+TH + R ++LPQ +R+I+P ++++ Sbjct: 370 VSINTGAYMTEIVRGGILAVDKGQFEAATALGMTHNQTMRKIVLPQVVRNILPATGNEFV 429 Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 +K++S+ + +L G T+ QT Q + I IY L+ + Sbjct: 430 INIKDTSVLNVISVVELYFSGNTVATQTYQYFQTFTIIAVIYFVLTFTV 478 >gi|170024600|ref|YP_001721105.1| polar amino acid ABC transporter inner membrane subunit [Yersinia pseudotuberculosis YPIII] gi|169751134|gb|ACA68652.1| polar amino acid ABC transporter, inner membrane subunit [Yersinia pseudotuberculosis YPIII] Length = 220 Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 39/128 (30%), Positives = 77/128 (60%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I LS TAA+ +E +R+ + ++ +GQ EAA ++G+T +A V+LPQA R+ +PPL + Sbjct: 93 IGLSLNTAAYTSETLRAAISSIEKGQWEAAASIGMTRWQALYRVILPQAGRTALPPLGNS 152 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++ L+K++SLA + +L I ++T + + L IY ++ +++ +RL A Sbjct: 153 FIGLVKDTSLAATIQVPELFRQAQLITSRTMEVFTMYLAASLIYWIMATLLSALQSRLEA 212 Query: 391 KIALKEKK 398 + ++++ Sbjct: 213 HVNRQDQE 220 >gi|148983846|ref|ZP_01817165.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae SP3-BS71] gi|147923993|gb|EDK75105.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae SP3-BS71] gi|301799546|emb|CBW32096.1| glutamine ABC transporter, glutamine-binding protein/permease protein [Streptococcus pneumoniae OXC141] Length = 521 Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 39/109 (35%), Positives = 66/109 (60%) Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 +S T A++ EIVR G++AV +GQ EAA ALG+TH + R ++LPQ +R+I+P ++++ Sbjct: 384 VSINTGAYMTEIVRGGILAVDKGQFEAATALGMTHNQTMRKIVLPQVVRNILPATGNEFV 443 Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 +K++S+ + +L G T+ QT Q + I IY L+ + Sbjct: 444 INIKDTSVLNVISVVELYFSGNTVATQTYQYFQTFTIIAVIYFVLTFTV 492 Score = 37.7 bits (86), Expect = 3.6, Method: Compositional matrix adjust. Identities = 26/71 (36%), Positives = 34/71 (47%), Gaps = 10/71 (14%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGR---LSANK-------LVAWICRVYVEVFRN 138 +L G T ++ G I IIG +G R LS NK LV WI VY+E+FR Sbjct: 293 LLRGSSITLLISIVGTITGLIIGLAIGVFRTAPLSENKVIYGLQKLVGWILNVYIEIFRG 352 Query: 139 IPPLVVIFFLY 149 P +V +Y Sbjct: 353 TPMIVQSMVIY 363 >gi|308175099|ref|YP_003921804.1| cystine ABC transporter permease [Bacillus amyloliquefaciens DSM 7] gi|307607963|emb|CBI44334.1| cystine ABC transporter (permease) [Bacillus amyloliquefaciens DSM 7] Length = 240 Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 53/180 (29%), Positives = 92/180 (51%), Gaps = 12/180 (6%) Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY---TA 278 LYIS F G P +V + + + + P L I S + P LY A++ Y +A Sbjct: 59 LYISFFR--GTPIMVQL---FIVFYGIPALTALAGIDTSKMDP----LYAAIATYVLSSA 109 Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338 A AEI+R G+ +V RGQ EAA ++GL + R ++LPQA+ P + + + LK++ Sbjct: 110 ARAAEIIRGGVNSVDRGQAEAAFSIGLNGVQTFRRIILPQALVQAFPNIGNMVIGFLKDT 169 Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 SLA ++G D+ G T+I + ++E+ + +Y + +++ +I E + Sbjct: 170 SLAFSIGVMDMSGRGQTLITSSNHSLEVYISLSVLYYAAALLFECVFRWCEKRIKKDETR 229 >gi|301018232|ref|ZP_07182747.1| ABC transporter, permease protein [Escherichia coli MS 69-1] gi|300399819|gb|EFJ83357.1| ABC transporter, permease protein [Escherichia coli MS 69-1] Length = 222 Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 62/207 (29%), Positives = 109/207 (52%), Gaps = 18/207 (8%) Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251 F +LG +L+L RLS + + L YIS F G P LIA + +++ P Sbjct: 32 FCLLLGFILALM--RLSPIWPVRW---LARFYISIFR--GTP---LIAQLFMIYYGLP-- 79 Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311 QF G + P S I LS TAA+ AE +R+ + ++ +GQ EAA ++G+T + Sbjct: 80 -QF----GIELDP-IPSAMIGLSLNTAAYAAETLRAAISSIDKGQWEAAASIGMTPWQTM 133 Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371 R +LPQA R +PPL++ +++L+K++SLA + +L I ++T + + L Sbjct: 134 RRAILPQAARVALPPLSNSFISLVKDTSLAATIQVPELFRQAQLITSRTLEVFTMYLAAS 193 Query: 372 FIYLSLSIMIALFMNRLNAKIALKEKK 398 IY ++ +++ N ++ +E++ Sbjct: 194 LIYWIMATVLSTLQNHFENQLNRQERE 220 Score = 36.6 bits (83), Expect = 6.2, Method: Compositional matrix adjust. Identities = 28/97 (28%), Positives = 45/97 (46%), Gaps = 8/97 (8%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G T L+ GM ++G ++ RLS V W+ R Y+ +FR P + +F + Sbjct: 15 LLKGAGYTLQLSIGGMFFCLLLGFILALMRLSPIWPVRWLARFYISIFRGTPLIAQLFMI 74 Query: 149 YKSV----LSVLPIPDHSIVLPFGMFLNNRGLSFPTL 181 Y + + + PIP I G+ LN + TL Sbjct: 75 YYGLPQFGIELDPIPSAMI----GLSLNTAAYAAETL 107 >gi|241114115|ref|YP_002973590.1| polar amino acid ABC transporter, inner membrane subunit [Ralstonia pickettii 12D] gi|240868688|gb|ACS66346.1| polar amino acid ABC transporter, inner membrane subunit [Ralstonia pickettii 12D] Length = 229 Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 48/136 (35%), Positives = 77/136 (56%), Gaps = 6/136 (4%) Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320 TV P + +L A +A+ EI+R+G+ +V GQ+ AA ALGLT +A R V+LPQA Sbjct: 94 TVGPIWAAL-AAFILAESAYYCEIIRAGIGSVKTGQLSAAKALGLTQWQALRHVILPQAF 152 Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS-- 378 R++ P L +Q + LLK++SL + D + G I + G+ +E+ L +YL L Sbjct: 153 RNMTPSLINQTIALLKDTSLVYVISLTDFLGAAGKIGQRDGRLVEMYLFSAAVYLVLCSF 212 Query: 379 ---IMIALFMNRLNAK 391 ++ A+ R+ A+ Sbjct: 213 GVWLVAAVQKKRMGAR 228 >gi|323465674|gb|ADX69361.1| Amino acid ABC transporter permease protein [Lactobacillus helveticus H10] Length = 562 Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 41/122 (33%), Positives = 75/122 (61%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I +S T A++AE++R G+I+ P Q EAA ALG+TH + ++LPQA+++ +P +T++ Sbjct: 416 IIVSINTGAYLAEVIRGGIISTPESQFEAASALGMTHNQKMWHIILPQAIKNCLPSITNE 475 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++ +K++S+ + ++L VG TI +Q+ + L+ IYL L+ I N + Sbjct: 476 FIVNIKDTSVLSIISVSELFFVGTTIASQSFKFFPTYLMISAIYLILTFTITRIFNLIER 535 Query: 391 KI 392 K+ Sbjct: 536 KL 537 Score = 38.1 bits (87), Expect = 2.4, Method: Compositional matrix adjust. Identities = 29/93 (31%), Positives = 40/93 (43%), Gaps = 10/93 (10%) Query: 67 RAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVG----------A 116 +AG E + T+ Y I+ G T LA G + IG LVG Sbjct: 305 KAGNETKKENWLVTTWKQYGGMIMSGIGMTLLLALVGTVVGFFIGLLVGIVRTIPTPTTR 364 Query: 117 GRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 G+ A +V W+ VYVE+FR P +V +Y Sbjct: 365 GKRWALNVVKWLLSVYVEIFRGTPMMVQAAVIY 397 >gi|325677375|ref|ZP_08157040.1| amino acid ABC superfamily ATP binding cassette transporter permease [Rhodococcus equi ATCC 33707] gi|325551838|gb|EGD21535.1| amino acid ABC superfamily ATP binding cassette transporter permease [Rhodococcus equi ATCC 33707] Length = 598 Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 60/171 (35%), Positives = 98/171 (57%), Gaps = 13/171 (7%) Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285 T + GLP +V+I L LG + G T S + ALS AA+I EI Sbjct: 414 TDIFRGLPAVVIILLVG--------LGVGPVVKGLTGSNPYWLGAAALSLLAAAYIGEIF 465 Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345 RSG+ +V GQMEAA ALG ++R++ LV++PQ +R ++P L +Q+++L+K+SSL +G Sbjct: 466 RSGIQSVEPGQMEAARALGFSYRRSMALVVIPQGVRRVLPALMNQFISLIKDSSLIYFLG 525 Query: 346 F----ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 +L +VG + QTG ++ +F YL+L+I + +N ++ ++ Sbjct: 526 LLVTQRELFAVGRDLNAQTGNLSPLVAAGLF-YLALTIPLTHLVNYIDRRL 575 Score = 42.7 bits (99), Expect = 0.10, Method: Compositional matrix adjust. Identities = 21/58 (36%), Positives = 31/58 (53%) Query: 91 VGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 G NT LA S I T IG L+ +S + + W RVY ++FR +P +V+I + Sbjct: 372 TGLPNTLILALSSGIVGTAIGMLLAVAGISRTRWLRWPARVYTDIFRGLPAVVIILLV 429 >gi|258622431|ref|ZP_05717453.1| amino acid ABC transporter, permease protein [Vibrio mimicus VM573] gi|258623750|ref|ZP_05718709.1| amino acid ABC transporter, permease protein [Vibrio mimicus VM603] gi|258583968|gb|EEW08758.1| amino acid ABC transporter, permease protein [Vibrio mimicus VM603] gi|258585131|gb|EEW09858.1| amino acid ABC transporter, permease protein [Vibrio mimicus VM573] Length = 298 Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 44/134 (32%), Positives = 75/134 (55%) Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317 G + + +S + + ++A+IAEIVR+GL +P+GQ EAA +LGL R V+ P Sbjct: 158 GPARLWENLLSGVLCIGLLSSAYIAEIVRAGLANIPQGQWEAADSLGLPTWVKYRYVIAP 217 Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377 Q + +I P L Q ++L+K++S+ + +L VG I N +G EI LI YL L Sbjct: 218 QVLTAITPALAGQTISLIKDTSIISLISIQELTFVGSEIANSSGLIFEIWLIVGAAYLVL 277 Query: 378 SIMIALFMNRLNAK 391 + +++ ++ + Sbjct: 278 CLTLSMLFKQVEKR 291 >gi|257878816|ref|ZP_05658469.1| amino acid ABC transporter [Enterococcus faecium 1,230,933] gi|257881454|ref|ZP_05661107.1| amino acid ABC transporter [Enterococcus faecium 1,231,502] gi|257885725|ref|ZP_05665378.1| amino acid ABC transporter [Enterococcus faecium 1,231,501] gi|257890675|ref|ZP_05670328.1| amino acid ABC transporter [Enterococcus faecium 1,231,410] gi|260558382|ref|ZP_05830578.1| amino acid ABC transporter [Enterococcus faecium C68] gi|261207089|ref|ZP_05921778.1| amino acid ABC transporter [Enterococcus faecium TC 6] gi|257813044|gb|EEV41802.1| amino acid ABC transporter [Enterococcus faecium 1,230,933] gi|257817112|gb|EEV44440.1| amino acid ABC transporter [Enterococcus faecium 1,231,502] gi|257821581|gb|EEV48711.1| amino acid ABC transporter [Enterococcus faecium 1,231,501] gi|257827035|gb|EEV53661.1| amino acid ABC transporter [Enterococcus faecium 1,231,410] gi|260075556|gb|EEW63862.1| amino acid ABC transporter [Enterococcus faecium C68] gi|260078717|gb|EEW66419.1| amino acid ABC transporter [Enterococcus faecium TC 6] Length = 526 Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 66/237 (27%), Positives = 113/237 (47%), Gaps = 38/237 (16%) Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLF------ATRLSRHFHEKTGKALPLL 222 MFL GL+ + T V LG+++ +F L+R F +K G AL + Sbjct: 296 MFLRGAGLTLFIALIGT-----VVGTTLGLLIGVFRSVPESGNALTRFF-QKIGNALLSI 349 Query: 223 YISTFLIFGLPTLVL-------IALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSC 275 Y+ F G P +V +AL + + ++ + +L+I +S Sbjct: 350 YVEVFR--GTPMMVQAMVIFYGLALAFGISLNRTI----------------AALFI-VSL 390 Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335 T A++ EIVR G+ AV GQ EAA A+G+TH + R V++PQ +R+I+P ++++ + Sbjct: 391 NTGAYMTEIVRGGIFAVDEGQFEAAQAIGMTHGQTMRKVVIPQVLRNILPATGNEFVINI 450 Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 K++++ +G ADL G + Q + I IYL ++ I + + KI Sbjct: 451 KDTAVLSVIGVADLFFQGNSASGANFQFFQTFTIVGIIYLVMTFTITRILRAVEKKI 507 >gi|215487123|ref|YP_002329554.1| predicted transporter subunit: membrane component of ABC superfamily [Escherichia coli O127:H6 str. E2348/69] gi|312967119|ref|ZP_07781337.1| L-cystine transport system permease protein tcyB [Escherichia coli 2362-75] gi|215265195|emb|CAS09584.1| predicted transporter subunit: membrane component of ABC superfamily [Escherichia coli O127:H6 str. E2348/69] gi|312288583|gb|EFR16485.1| L-cystine transport system permease protein tcyB [Escherichia coli 2362-75] Length = 222 Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 62/207 (29%), Positives = 109/207 (52%), Gaps = 18/207 (8%) Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251 F +LG +L+L RLS + + L YIS F G P LIA + +++ P Sbjct: 32 FGLLLGFILALM--RLSPIWPVRW---LARFYISIFR--GTP---LIAQLFMIYYGLP-- 79 Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311 QF G + P S I LS TAA+ AE +R+ + ++ +GQ EAA ++G+T + Sbjct: 80 -QF----GIELDP-IPSAMIGLSLNTAAYAAETLRAAISSIDKGQWEAAASIGMTPWQTM 133 Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371 R +LPQA R +PPL++ +++L+K++SLA + +L I ++T + + L Sbjct: 134 RRAILPQAARVALPPLSNSFISLVKDTSLAATIQVPELFRQAQLITSRTLEVFTMYLAAS 193 Query: 372 FIYLSLSIMIALFMNRLNAKIALKEKK 398 IY ++ +++ N ++ +E++ Sbjct: 194 LIYWIMATVLSTLQNHFENQLNRQERE 220 Score = 37.0 bits (84), Expect = 4.9, Method: Compositional matrix adjust. Identities = 28/97 (28%), Positives = 45/97 (46%), Gaps = 8/97 (8%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G T L+ GM ++G ++ RLS V W+ R Y+ +FR P + +F + Sbjct: 15 LLKGAGYTLQLSIGGMFFGLLLGFILALMRLSPIWPVRWLARFYISIFRGTPLIAQLFMI 74 Query: 149 YKSV----LSVLPIPDHSIVLPFGMFLNNRGLSFPTL 181 Y + + + PIP I G+ LN + TL Sbjct: 75 YYGLPQFGIELDPIPSAMI----GLSLNTAAYAAETL 107 >gi|15896569|ref|NP_349918.1| amino acid ABC transporter permease [Clostridium acetobutylicum ATCC 824] gi|15026406|gb|AAK81258.1|AE007829_11 Amino acid ABC-type transporter, permease component [Clostridium acetobutylicum ATCC 824] gi|325510730|gb|ADZ22366.1| Amino acid ABC-type transporter, permease component [Clostridium acetobutylicum EA 2018] Length = 227 Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 49/184 (26%), Positives = 92/184 (50%), Gaps = 24/184 (13%) Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269 F+ + PLL + FGLPT+ G T+ P + Sbjct: 63 RFYVSIIRGTPLLVQLFIIFFGLPTV-----------------------GVTIKP-LTAA 98 Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329 I + A+ +E++R+ ++++P+GQ EAA ++G+T+ ++ V+LPQA R +PPL + Sbjct: 99 IIGFTLSVGAYNSEVIRAAILSIPKGQWEAASSIGMTYTQSLVRVVLPQAARVSVPPLAN 158 Query: 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 +++L+K++SLA + A++ V I T + + + + FIY ++ L + L Sbjct: 159 SFISLVKDTSLAATITVAEMFQVAQRITATTYEPLWMYIEAAFIYYIFCSLLTLIQHYLE 218 Query: 390 AKIA 393 K+A Sbjct: 219 KKLA 222 >gi|327462865|gb|EGF09187.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK1057] gi|328944941|gb|EGG39099.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK1087] Length = 521 Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 40/106 (37%), Positives = 65/106 (61%) Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 +S T A+++EIVR G+ AV +GQ EAA ALG+TH + R ++LPQ +R+I+P ++++ Sbjct: 383 VSINTGAYMSEIVRGGIFAVDKGQFEAATALGMTHGQTMRKIVLPQVVRNILPATGNEFV 442 Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378 +K++S+ + +L G TI QT Q + I IY L+ Sbjct: 443 INIKDTSVLNVISVVELYFSGNTIATQTYQYFQTFTIIAVIYFVLT 488 Score = 37.7 bits (86), Expect = 3.2, Method: Compositional matrix adjust. Identities = 28/88 (31%), Positives = 40/88 (45%), Gaps = 11/88 (12%) Query: 96 TFWLAFSGMIPATIIGTLVGAGRL---SANKLVA-------WICRVYVEVFRNIPPLVVI 145 T ++ +G I IIG L+G R S NKL+A W VY+E+FR P +V Sbjct: 299 TLLISITGTIAGLIIGLLIGVYRTAPASKNKLLASLQKIFGWFLNVYIEIFRGTPMIVQS 358 Query: 146 FFLYKSVLSVLPIP-DHSIVLPFGMFLN 172 +Y I D +I F + +N Sbjct: 359 MVIYYGTAQAFGISIDRTIAAIFIVSIN 386 >gi|238761028|ref|ZP_04622005.1| Glutamine transport system permease protein glnP [Yersinia kristensenii ATCC 33638] gi|238761281|ref|ZP_04622257.1| Glutamine transport system permease protein glnP [Yersinia kristensenii ATCC 33638] gi|238700255|gb|EEP92996.1| Glutamine transport system permease protein glnP [Yersinia kristensenii ATCC 33638] gi|238700508|gb|EEP93248.1| Glutamine transport system permease protein glnP [Yersinia kristensenii ATCC 33638] Length = 189 Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 42/129 (32%), Positives = 76/129 (58%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + + + + A+IAEI R ++++ G EA +ALGL+ R R V+ P A+R ++P Sbjct: 60 FSAAVVTIMINSGAYIAEITRGAVLSIHNGFREAGLALGLSKRDTLRYVIAPLALRRMLP 119 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PL +Q++ +K++SL + +G A+L G II +A+EI IYL +++ ++ + Sbjct: 120 PLGNQWIVSIKDTSLFIVIGVAELTRQGQEIIAGNFRAMEIWSAVAVIYLIITLALSFVL 179 Query: 386 NRLNAKIAL 394 RL K+ + Sbjct: 180 RRLERKLKI 188 >gi|237751712|ref|ZP_04582192.1| amino acid ABC transporter ATP-binding protein [Helicobacter bilis ATCC 43879] gi|229373078|gb|EEO23469.1| amino acid ABC transporter ATP-binding protein [Helicobacter bilis ATCC 43879] Length = 234 Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 37/104 (35%), Positives = 70/104 (67%), Gaps = 3/104 (2%) Query: 249 PVLGQ---FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305 P+L Q F +I +T++ F++ +A+ ++A+IAEIVR+G+ +V +GQM+A A+GL Sbjct: 85 PLLIQLLVFAYIVFATLNDNFLAALVAIGLNSSAYIAEIVRAGIQSVDKGQMDAGRAMGL 144 Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349 TH R +++PQA+++I+P L ++++ + K +S+ + DL Sbjct: 145 THSATMRHIIMPQAIKNILPSLANEFIVVFKETSVVGLISVNDL 188 >gi|320538105|ref|ZP_08038002.1| ABC transporter, permease protein [Treponema phagedenis F0421] gi|320145039|gb|EFW36758.1| ABC transporter, permease protein [Treponema phagedenis F0421] Length = 229 Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 41/114 (35%), Positives = 68/114 (59%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 +F+ I L+ + A+I EI RSG+ A+ GQ EAA +LGL++R+ RL++ PQA ++ + Sbjct: 99 DFIPGVITLAINSGAYICEIFRSGIQAIEIGQTEAARSLGLSYRQTLRLIIFPQAFKTAL 158 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378 P L ++++ ++K SS+ +G ADL+ I T E +LI Y L+ Sbjct: 159 PTLGNEFIAVIKESSIVSVIGIADLMYKANVIRGNTFLPFEPLLIAALCYFLLT 212 Score = 37.0 bits (84), Expect = 5.4, Method: Compositional matrix adjust. Identities = 27/95 (28%), Positives = 48/95 (50%), Gaps = 6/95 (6%) Query: 83 SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142 + Y L+G NT LA + +IG ++ GR+S K + +I YVE R P L Sbjct: 7 AKYWLYYLIGIKNTVLLALFTVAFGVLIGIVLVLGRISKQKWLRFISTAYVEFIRGTPLL 66 Query: 143 VVIFFLYKSVLSV-LPIPDHSIV-----LPFGMFL 171 V +F +Y + ++ + P++ ++ +PF F+ Sbjct: 67 VQLFIIYYGLPALGIKFPNNKLLSSIIGMPFSDFI 101 >gi|326203069|ref|ZP_08192935.1| polar amino acid ABC transporter, inner membrane subunit [Clostridium papyrosolvens DSM 2782] gi|325986715|gb|EGD47545.1| polar amino acid ABC transporter, inner membrane subunit [Clostridium papyrosolvens DSM 2782] Length = 218 Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 39/127 (30%), Positives = 77/127 (60%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IA + A+I+EI R + ++ RGQ EAA ++G++ +A ++LPQA++ +PPL +Q Sbjct: 92 IAFGLHNGAYISEIFRGAIKSIDRGQFEAARSIGMSKFRAMYRIILPQALKRAVPPLGNQ 151 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++ K+SSLA AV +L+ + + T + +E LI Y ++ ++ F+++L Sbjct: 152 FIIATKDSSLASAVTVKELLLKSQQMGSSTFRFMEYFLIAGIYYFIMTSILGFFVHKLEK 211 Query: 391 KIALKEK 397 ++A+ ++ Sbjct: 212 RLAVSDR 218 >gi|94990274|ref|YP_598374.1| cystine transport system permease protein [Streptococcus pyogenes MGAS10270] gi|94543782|gb|ABF33830.1| Cystine transport system permease protein [Streptococcus pyogenes MGAS10270] Length = 216 Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 42/131 (32%), Positives = 74/131 (56%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P + Y+ S +AA+I+E+ RS + A+ +GQ EAA ALGL + R ++LPQA R Sbjct: 85 PALLCAYLGFSMVSAAYISEVFRSSIEAIDKGQWEAAKALGLPYALMVRKIILPQAFRIA 144 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 +PPL + ++++K+SSLA + D+ I + + + ++ FIY ++ ++ Sbjct: 145 VPPLGNVIIDMVKSSSLAAMITVPDIFQNAKIIGGREWDYMSMYILVAFIYWLIAFLLER 204 Query: 384 FMNRLNAKIAL 394 + L K+AL Sbjct: 205 YQEFLENKLAL 215 >gi|323493778|ref|ZP_08098896.1| putative amino-acid ABC transporter permease PatM [Vibrio brasiliensis LMG 20546] gi|323311912|gb|EGA65058.1| putative amino-acid ABC transporter permease PatM [Vibrio brasiliensis LMG 20546] Length = 223 Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 56/170 (32%), Positives = 97/170 (57%), Gaps = 15/170 (8%) Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALK 241 TM+ +FS VL ++L+ R F L LYIS F G P LV + L Sbjct: 22 TMEMATWGLLFSLVLAVILANI-----RVFRVPVLDQLSQLYISFFR--GTPLLVQLFL- 73 Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301 L++ P + F ++ G F + I L+ + AA++AE +R+ +I + R QMEA++ Sbjct: 74 --LYYGLPQV--FPWLVGLDA---FSAAVIGLTLHFAAYMAESIRAAIIGIDRSQMEASL 126 Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 ++G+T +A R V+LPQA R +P L + +++++K++SLA +G A++++ Sbjct: 127 SVGMTTSQAMRRVILPQATRVALPSLMNYFIDMIKSTSLAFTLGVAEIMA 176 >gi|294618488|ref|ZP_06698052.1| amino acid ABC transporter, amino acid-binding/permease protein [Enterococcus faecium E1679] gi|291595245|gb|EFF26574.1| amino acid ABC transporter, amino acid-binding/permease protein [Enterococcus faecium E1679] Length = 540 Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 66/237 (27%), Positives = 113/237 (47%), Gaps = 38/237 (16%) Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLF------ATRLSRHFHEKTGKALPLL 222 MFL GL+ + T V LG+++ +F L+R F +K G AL + Sbjct: 310 MFLRGAGLTLFIALIGT-----VVGTTLGLLIGVFRSVPESGNALTRFF-QKIGNALLSI 363 Query: 223 YISTFLIFGLPTLVL-------IALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSC 275 Y+ F G P +V +AL + + ++ + +L+I +S Sbjct: 364 YVEVFR--GTPMMVQAMVIFYGLALAFGISLNRTI----------------AALFI-VSL 404 Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335 T A++ EIVR G+ AV GQ EAA A+G+TH + R V++PQ +R+I+P ++++ + Sbjct: 405 NTGAYMTEIVRGGIFAVDEGQFEAAQAIGMTHGQTMRKVVIPQVLRNILPATGNEFVINI 464 Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 K++++ +G ADL G + Q + I IYL ++ I + + KI Sbjct: 465 KDTAVLSVIGVADLFFQGNSASGANFQFFQTFTIVGIIYLVMTFTITRILRAVEKKI 521 >gi|322833089|ref|YP_004213116.1| binding-protein-dependent transport systems inner membrane component [Rahnella sp. Y9602] gi|321168290|gb|ADW73989.1| binding-protein-dependent transport systems inner membrane component [Rahnella sp. Y9602] Length = 228 Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 65/212 (30%), Positives = 109/212 (51%), Gaps = 18/212 (8%) Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240 LT+ A V + + G++++ A R G +L+I I G+P LI + Sbjct: 30 LTLIMAASAGVLALLAGVLMAALAWRFG-------GWTRKILFIWASFIRGIP---LIFV 79 Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300 + L+F PV+ GGS P +++ +AL+ +T+A + +GL A+PRGQ EA Sbjct: 80 IFWLYFLLPVV-----FGGSIPGP--LTVILALAWFTSAAVMHSTLAGLEALPRGQTEAG 132 Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 IA G+++ K VLLPQA +++P ++L+K++SLA V +L +V G + N+ Sbjct: 133 IASGMSYGKVLLFVLLPQAWPNLLPSYLGLLISLVKDTSLAFIVNVPELTTVAGQVNNRV 192 Query: 361 G-QAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 EI L+ +Y L + +A R+ K Sbjct: 193 QIYPAEIFLLVGLMYYLLCVTLAYLAGRVVRK 224 >gi|312141964|ref|YP_004009300.1| abc transporter substrate binding lipoprotein [Rhodococcus equi 103S] gi|311891303|emb|CBH50624.1| putative ABC transporter substrate binding lipoprotein [Rhodococcus equi 103S] Length = 598 Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 60/171 (35%), Positives = 98/171 (57%), Gaps = 13/171 (7%) Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285 T + GLP +V+I L LG + G T S + ALS AA+I EI Sbjct: 414 TDIFRGLPAVVIILLVG--------LGVGPVVKGLTGSNPYWLGAAALSLLAAAYIGEIF 465 Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345 RSG+ +V GQMEAA ALG ++R++ LV++PQ +R ++P L +Q+++L+K+SSL +G Sbjct: 466 RSGIQSVEPGQMEAARALGFSYRRSMALVVIPQGVRRVLPALMNQFISLIKDSSLIYFLG 525 Query: 346 F----ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 +L +VG + QTG ++ +F YL+L+I + +N ++ ++ Sbjct: 526 LLVTQRELFAVGRDLNAQTGNLSPLVAAGLF-YLALTIPLTHLVNYIDRRL 575 Score = 42.7 bits (99), Expect = 0.099, Method: Compositional matrix adjust. Identities = 21/58 (36%), Positives = 31/58 (53%) Query: 91 VGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 G NT LA S I T IG L+ +S + + W RVY ++FR +P +V+I + Sbjct: 372 TGLPNTLILALSSGIVGTAIGMLLAVAGISRTRWLRWPARVYTDIFRGLPAVVIILLV 429 >gi|283455572|ref|YP_003360136.1| ABC transporter permease [Bifidobacterium dentium Bd1] gi|283102206|gb|ADB09312.1| Permease protein of ABC transporter system [Bifidobacterium dentium Bd1] Length = 240 Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 48/138 (34%), Positives = 79/138 (57%), Gaps = 1/138 (0%) Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312 +F + +V F + ++ L AA++AEIVR+GL AV GQ EAA ALG+ R Sbjct: 57 EFWSVDSQSVITAFNAAWLGLVLNEAAYLAEIVRAGLEAVDPGQTEAAKALGMKRSLIMR 116 Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA-DLVSVGGTIINQTGQAIEIILIWM 371 ++LPQAMR IIPP ++++ +LK +SL AV F +L I + + I ++++ Sbjct: 117 RIVLPQAMRIIIPPTGNEFIGMLKTTSLVNAVPFTLELQFATTAIATRLYKPIPLLIVAC 176 Query: 372 FIYLSLSIMIALFMNRLN 389 YL ++ ++ + +RL Sbjct: 177 IWYLVITSILMIIQSRLE 194 >gi|149012202|ref|ZP_01833311.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae SP19-BS75] gi|147763804|gb|EDK70738.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae SP19-BS75] Length = 521 Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 39/109 (35%), Positives = 66/109 (60%) Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 +S T A++ EIVR G++AV +GQ EAA ALG+TH + R ++LPQ +R+I+P ++++ Sbjct: 384 VSINTGAYMTEIVRGGILAVDKGQFEAATALGMTHNQTMRKIVLPQVVRNILPATGNEFV 443 Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 +K++S+ + +L G T+ QT Q + I IY L+ + Sbjct: 444 INIKDTSVLNVISVVELYFSGNTVATQTYQYFQTFTIIAVIYFVLTFTV 492 Score = 37.4 bits (85), Expect = 3.8, Method: Compositional matrix adjust. Identities = 24/64 (37%), Positives = 31/64 (48%), Gaps = 10/64 (15%) Query: 96 TFWLAFSGMIPATIIGTLVGAGR---LSANK-------LVAWICRVYVEVFRNIPPLVVI 145 T ++ G I IIG +G R LS NK LV WI VY+E+FR P +V Sbjct: 300 TLLISIVGTITGLIIGLAIGVFRTAPLSENKAIYGLQKLVGWILNVYIEIFRGTPMIVQS 359 Query: 146 FFLY 149 +Y Sbjct: 360 MVIY 363 >gi|238749889|ref|ZP_04611393.1| Glutamine transport system permease protein glnP [Yersinia rohdei ATCC 43380] gi|238711818|gb|EEQ04032.1| Glutamine transport system permease protein glnP [Yersinia rohdei ATCC 43380] Length = 218 Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 42/129 (32%), Positives = 76/129 (58%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + + + + A+IAEI R ++++ G EA +ALGL+ R R V+ P A+R ++P Sbjct: 89 FSAAVVTIMINSGAYIAEITRGAVLSIHNGFREAGLALGLSKRDTLRYVIAPLALRRMLP 148 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PL +Q++ +K++SL + +G A+L G II +A+EI IYL +++ ++ + Sbjct: 149 PLGNQWIVSIKDTSLFIVIGVAELTRQGQEIIAGNFRAMEIWSAVAVIYLIITLALSFVL 208 Query: 386 NRLNAKIAL 394 RL K+ + Sbjct: 209 RRLERKLKI 217 >gi|238027408|ref|YP_002911639.1| Polar amino acid ABC transporter inner membrane subunit [Burkholderia glumae BGR1] gi|237876602|gb|ACR28935.1| Polar amino acid ABC transporter, inner membrane subunit [Burkholderia glumae BGR1] Length = 248 Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 49/147 (33%), Positives = 81/147 (55%), Gaps = 4/147 (2%) Query: 251 LGQFNFIGGSTVSPEFMSLYI----ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306 LGQF I S + P Y+ +L+ TA + AEI+R GL+AVP GQ+EA A+GL+ Sbjct: 78 LGQFGVIRESFLWPVLREPYVCAVLSLALCTAGYTAEIIRGGLMAVPVGQIEAGQAIGLS 137 Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 R V+ P A+R +P +++ + L+K+++LA V ++ V II QT + E+ Sbjct: 138 GFALLRRVIGPIALRQCLPAYSTEAVLLVKSTALASLVTVWEVTGVAQQIIQQTYRTTEV 197 Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIA 393 IYL L+ + + + A+++ Sbjct: 198 FACAALIYLFLNFFVVRVLGCVEARLS 224 >gi|307308009|ref|ZP_07587727.1| polar amino acid ABC transporter, inner membrane subunit [Sinorhizobium meliloti BL225C] gi|306901413|gb|EFN32017.1| polar amino acid ABC transporter, inner membrane subunit [Sinorhizobium meliloti BL225C] Length = 549 Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 55/150 (36%), Positives = 84/150 (56%), Gaps = 15/150 (10%) Query: 195 VLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL---IFGLPTLVLIALKYQLHFDKPVL 251 VL I+L L + H + PL S F+ I G+P LV++ L+ P+ Sbjct: 354 VLAIILGLLT--FGGYLHRRH----PLAIGSEFVVDTIRGIPMLVIV-----LYVGLPLS 402 Query: 252 GQF-NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 G + G P M +A++ +A++AEI RSG+ A+P GQ+EAA ++GL + Sbjct: 403 GALKDATQGVLDPPNLMRGIVAMALAYSAYLAEIFRSGINAIPIGQIEAARSIGLNRWQT 462 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340 RLV+LPQA R IIPPL ++ + +LK++SL Sbjct: 463 ARLVVLPQAFRIIIPPLGNELIAILKDTSL 492 >gi|295100980|emb|CBK98525.1| L-glutamate ABC transporter membrane protein/L-aspartate ABC transporter membrane protein [Faecalibacterium prausnitzii L2-6] Length = 246 Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 49/135 (36%), Positives = 78/135 (57%), Gaps = 13/135 (9%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IAL YT A++ E+VR+ + +VP+GQ EAA A G + + ++LPQ++ ++PP+ +Q Sbjct: 98 IALGVYTGAYMGEVVRAAIESVPKGQFEAAQAQGFNYLQRMGYIILPQSIPVMLPPMVNQ 157 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIIN--QTGQA-----IEIILIWMFIYLSLSIMIAL 383 +NL KN+S VG ADL+SV + + TG A I LI+ + LS + A Sbjct: 158 VVNLFKNTSCLYIVGGADLISVTYSFVTGASTGGAYAPAYIVCGLIFFVVCFPLSTLAAR 217 Query: 384 FMNRLNAKIALKEKK 398 + + +LKE+K Sbjct: 218 W------EASLKERK 226 Score = 39.3 bits (90), Expect = 1.0, Method: Compositional matrix adjust. Identities = 24/66 (36%), Positives = 36/66 (54%) Query: 84 SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143 ++ + L+G NT A + A IIG +G S +KL+ I R+YVE +N P L+ Sbjct: 15 THRESFLLGLGNTLQTAVCALALAFIIGAALGLMSTSGSKLLRIIARIYVEFVQNTPLLL 74 Query: 144 VIFFLY 149 + FLY Sbjct: 75 QLCFLY 80 >gi|158313075|ref|YP_001505583.1| polar amino acid ABC transporter, inner membrane subunit [Frankia sp. EAN1pec] gi|158108480|gb|ABW10677.1| polar amino acid ABC transporter, inner membrane subunit [Frankia sp. EAN1pec] Length = 235 Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 45/113 (39%), Positives = 67/113 (59%), Gaps = 1/113 (0%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +AL+ Y A + E VRSG+ V GQ EAA ALGLT + RLV+LPQA R+++ PL S Sbjct: 108 MALTIYHTALVCEAVRSGVNGVDAGQAEAARALGLTFSQTLRLVVLPQAFRNVVQPLGSV 167 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQT-GQAIEIILIWMFIYLSLSIMIA 382 L++N+S+A A G +L + + G I ++L + YL L++ +A Sbjct: 168 GSALIRNTSIAAAFGVQELTGISQRLTTANPGDVIAVLLAGIVCYLVLTLSLA 220 >gi|317492512|ref|ZP_07950940.1| His/Glu/Gln/Arg/opine family amino ABC transporter [Enterobacteriaceae bacterium 9_2_54FAA] gi|316919504|gb|EFV40835.1| His/Glu/Gln/Arg/opine family amino ABC transporter [Enterobacteriaceae bacterium 9_2_54FAA] Length = 222 Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 40/118 (33%), Positives = 73/118 (61%) Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 + A+IAEI R ++++ G EA +ALGL+ R R V++P A+R ++PPL +Q++ +K Sbjct: 104 SGAYIAEITRGAVLSIHNGFREAGLALGLSKRDTLRYVIMPLALRRMLPPLGNQWIVSIK 163 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394 ++SL + +G A+L G II +A+EI IYL +++ ++ + RL ++ + Sbjct: 164 DTSLFIVIGVAELTRQGQEIIAGNFRAMEIWSAVAVIYLIITLALSYVLRRLERRLKI 221 >gi|262173296|ref|ZP_06040973.1| amino acid ABC transporter permease protein [Vibrio mimicus MB-451] gi|261890654|gb|EEY36641.1| amino acid ABC transporter permease protein [Vibrio mimicus MB-451] Length = 298 Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 44/134 (32%), Positives = 75/134 (55%) Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317 G + + +S + + ++A+IAEIVR+GL +P+GQ EAA +LGL R V+ P Sbjct: 158 GPARLWENLLSGVLCIGLLSSAYIAEIVRAGLANIPQGQWEAADSLGLPTWVKYRYVIAP 217 Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377 Q + +I P L Q ++L+K++S+ + +L VG I N +G EI LI YL L Sbjct: 218 QVLTAITPALAGQTISLIKDTSIISLISIQELTFVGSEIANSSGLIFEIWLIVGAAYLVL 277 Query: 378 SIMIALFMNRLNAK 391 + +++ ++ + Sbjct: 278 CLTLSMLFKQVEKR 291 >gi|218248365|ref|YP_002373736.1| polar amino acid ABC transporter inner membrane subunit [Cyanothece sp. PCC 8801] gi|218168843|gb|ACK67580.1| polar amino acid ABC transporter, inner membrane subunit [Cyanothece sp. PCC 8801] Length = 401 Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 67/204 (32%), Positives = 107/204 (52%), Gaps = 27/204 (13%) Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL-VLIA 239 LT+ T V SF GI+L+L R + L + YI +I GLP + +L Sbjct: 201 LTLLTAIVSIVLSFPFGILLAL-----GRQSSLNVIRWLSIAYIE--VIRGLPLIGILFM 253 Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIA-LSCYTAAFIAEIVRSGLIAVPRGQME 298 + L PV GS P+ + IA + ++AA++AE VR GL +VP+GQ+E Sbjct: 254 AQIMLPLILPV--------GS--RPDRVIRAIAGFTLFSAAYLAENVRGGLQSVPKGQIE 303 Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN 358 AA ALGL ++LPQA++++IP + Q+++L K++SL VG DL+ + +I+ Sbjct: 304 AAKALGLNPIFVLIFIVLPQALKAVIPSIVGQFISLFKDTSLLAIVGLVDLLGISQSILA 363 Query: 359 Q---TGQAIEI-----ILIWMFIY 374 G+ E+ ++ W+F Y Sbjct: 364 NPKFIGRYGEVYLFIAVIYWIFCY 387 >gi|170690740|ref|ZP_02881906.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia graminis C4D1M] gi|170143989|gb|EDT12151.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia graminis C4D1M] Length = 218 Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 50/151 (33%), Positives = 82/151 (54%), Gaps = 10/151 (6%) Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287 LI G P +V + L+F P+L G + IA++ + A++AE+VR Sbjct: 61 LIRGTPIVVQVMF---LYFALPLLAHLRIDG-------LTAAIIAITVNSGAYLAEVVRG 110 Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347 L+++P+G MEA +A+GL+ + ++ P A R +IPPL +Q + LK++SL + +G Sbjct: 111 ALLSIPKGLMEAGLAMGLSTPRVLMKIIGPLAFRRLIPPLGNQCIVSLKDTSLFIVIGVG 170 Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378 +L G II +A+EI IYL L+ Sbjct: 171 ELTRKGQEIIASNFRAVEIWSAVAVIYLVLT 201 Score = 38.5 bits (88), Expect = 1.7, Method: Compositional matrix adjust. Identities = 31/107 (28%), Positives = 51/107 (47%), Gaps = 13/107 (12%) Query: 96 TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSV 155 T ++AF G+I I+G + G R + I +VYVE+ R P +V + FLY + Sbjct: 22 TVFIAFVGLIGGFIVGVVAGTCRAYGPLALNVIAQVYVELIRGTPIVVQVMFLYFA---- 77 Query: 156 LPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL 202 LP+ H L GL+ + + N+ ++ V G +LS+ Sbjct: 78 LPLLAH---------LRIDGLTAAIIAITVNSGAYLAEVVRGALLSI 115 >gi|229003760|ref|ZP_04161571.1| Amino acid ABC transporter [Bacillus mycoides Rock1-4] gi|228757493|gb|EEM06727.1| Amino acid ABC transporter [Bacillus mycoides Rock1-4] Length = 209 Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 49/157 (31%), Positives = 94/157 (59%), Gaps = 14/157 (8%) Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244 T + + +FV+GI+L++F T L+R + + + +Y+S +I G P LV + + + Sbjct: 10 TTIPLTIITFVIGIILAIF-TALARISSSRLLQWIARIYVS--IIRGTPLLVQL---FII 63 Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304 + P L + P + + I S A+ +EI+R+ ++++P+GQ EAA +G Sbjct: 64 FYGLPTLN-------IEIDP-YPAAIIGFSLNVGAYASEIIRASILSIPKGQWEAAYTIG 115 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341 +T+ +A + ++LPQA R IPPL++ +++L+K++SLA Sbjct: 116 MTYPQALKRIILPQATRVSIPPLSNTFISLVKDTSLA 152 Score = 37.7 bits (86), Expect = 3.5, Method: Compositional matrix adjust. Identities = 19/53 (35%), Positives = 31/53 (58%), Gaps = 8/53 (15%) Query: 105 IPATIIGTLVGA--------GRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 IP TII ++G R+S+++L+ WI R+YV + R P LV +F ++ Sbjct: 12 IPLTIITFVIGIILAIFTALARISSSRLLQWIARIYVSIIRGTPLLVQLFIIF 64 >gi|171315680|ref|ZP_02904914.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria MEX-5] gi|171099212|gb|EDT43985.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria MEX-5] Length = 500 Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 56/183 (30%), Positives = 95/183 (51%), Gaps = 10/183 (5%) Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252 +++LG+++ F L+R H K +YI F LP LVL+ Y L P Sbjct: 31 AWLLGVLIG-FPVALARQSHRPLLKRAAAVYIWFFR--SLPLLVLLVFIYNLPQVFPATS 87 Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312 + +S F + IA+ A+ AEI R G+++VPRGQ+EA ALG+ R Sbjct: 88 -------AVLSDPFTAGLIAMVLSETAYFAEIHRGGILSVPRGQLEAGRALGIRFAGIQR 140 Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372 ++++PQA+R +P L ++++ ++K +SL + A+++ VG + Q E +L F Sbjct: 141 MIVMPQAIRIALPALANEFITIVKLTSLVSVISLAEILLVGQRLYTQNFLVFETMLAVAF 200 Query: 373 IYL 375 Y+ Sbjct: 201 YYV 203 >gi|170751306|ref|YP_001757566.1| polar amino acid ABC transporter, inner membrane subunit [Methylobacterium radiotolerans JCM 2831] gi|170657828|gb|ACB26883.1| polar amino acid ABC transporter, inner membrane subunit [Methylobacterium radiotolerans JCM 2831] Length = 226 Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 63/201 (31%), Positives = 100/201 (49%), Gaps = 18/201 (8%) Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252 +F LG+ L L T L R F + AL LY+ F G P LV + + + + P G Sbjct: 30 AFALGLALGL-GTALVRLFAPRPLAALAWLYVWIFR--GTPLLVQL---FVIFYGLPSTG 83 Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312 + F + I + A+ +EIVR+ + ++P+GQ EAA A G+T +A R Sbjct: 84 --------ILIDAFPAAVIGFTLNVGAYTSEIVRAAIASIPKGQWEAAYATGMTPVQALR 135 Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA----IEIIL 368 +LPQA R +P L + ++ L+K++SLA A+ +L I+ T + IE+ L Sbjct: 136 RTILPQAARVAVPSLANSFIALVKDTSLAAAITVPELFQAAQRIVAVTYEPLILYIEVAL 195 Query: 369 IWMFIYLSLSIMIALFMNRLN 389 I++ + LS + L RL Sbjct: 196 IYLVLSTLLSWLQTLLERRLG 216 >gi|296113907|ref|YP_003627845.1| octopine transport system permease protein OccM [Moraxella catarrhalis RH4] gi|295921601|gb|ADG61952.1| octopine transport system permease protein OccM [Moraxella catarrhalis RH4] gi|326561457|gb|EGE11807.1| octopine transport system permease protein OccM [Moraxella catarrhalis 46P47B1] gi|326562228|gb|EGE12556.1| octopine transport system permease protein OccM [Moraxella catarrhalis 7169] gi|326567182|gb|EGE17304.1| octopine transport system permease protein OccM [Moraxella catarrhalis BC1] gi|326572018|gb|EGE22020.1| octopine transport system permease protein OccM [Moraxella catarrhalis BC8] gi|326576286|gb|EGE26201.1| octopine transport system permease protein OccM [Moraxella catarrhalis CO72] Length = 241 Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 63/208 (30%), Positives = 105/208 (50%), Gaps = 18/208 (8%) Query: 195 VLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQF 254 V G++L L+ RLS + A+P YI F G P LV I L Y LGQF Sbjct: 35 VFGVILGLW--RLSPVLWLR---AIPATYI--FFFRGTPLLVQIFLIYY------GLGQF 81 Query: 255 -----NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309 +F+ S + IA + T+A+I EIVR ++AVP G++EAA A+G++ ++ Sbjct: 82 TALKESFLWDPIFSQAYWCAIIAFTLNTSAYIGEIVRGAVMAVPTGELEAADAIGMSKQQ 141 Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369 V+LP+A +IP +++ + +LK S+LA ++ +L II+ T +E+ Sbjct: 142 KLHRVILPRAFGIMIPAYSNEVIFMLKGSALAASITVVELTHKARDIISITYLHLEMFFA 201 Query: 370 WMFIYLSLSIMIALFMNRLNAKIALKEK 397 IYL +S + + ++ ++ Sbjct: 202 AGMIYLVISWVFLFIFRQFEHRVNRHKR 229 >gi|227113888|ref|ZP_03827544.1| binding-protein-dependent transport system inner membrane component [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 144 Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 38/128 (29%), Positives = 80/128 (62%), Gaps = 1/128 (0%) Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 AL+ +A++A V++G++A+ RGQ +A ++LGL+ + ++LPQA+R ++P +Q+ Sbjct: 4 ALALIASAYLAHGVKAGIVAIGRGQWQAGLSLGLSRWQVLWQIVLPQALRMMVPSFINQW 63 Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTG-QAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++L+K++SLA VG +L + + N++ +E+ L +Y + + L N +N+ Sbjct: 64 ISLIKDTSLAYIVGVGELTFLATQVNNRSMVYPMEVFLFVALVYFVFCLSLELLANGVNS 123 Query: 391 KIALKEKK 398 + + +EK+ Sbjct: 124 RFSQQEKQ 131 >gi|226327561|ref|ZP_03803079.1| hypothetical protein PROPEN_01432 [Proteus penneri ATCC 35198] gi|225204087|gb|EEG86441.1| hypothetical protein PROPEN_01432 [Proteus penneri ATCC 35198] Length = 160 Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 40/136 (29%), Positives = 81/136 (59%), Gaps = 1/136 (0%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 PE ++ AL+ T+++IA V++G++A+ +GQ +A ++LG + ++LPQA+R + Sbjct: 4 PEITTVICALALITSSYIAHGVKAGILAIGKGQWQAGLSLGFNRWQVLWHIVLPQALRMM 63 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG-QAIEIILIWMFIYLSLSIMIA 382 +P +Q++ L+K++SLA VG +L + + N++ +E+ L FIY L + Sbjct: 64 VPSFINQWIALIKDTSLAYVVGVGELSFLATQVNNRSMVYPMEVFLFVAFIYFVLCFSLE 123 Query: 383 LFMNRLNAKIALKEKK 398 + NR+ + +++K Sbjct: 124 IIANRVAKLFSTQKEK 139 >gi|330504738|ref|YP_004381607.1| polar amino acid ABC transporter inner membrane subunit [Pseudomonas mendocina NK-01] gi|328919024|gb|AEB59855.1| polar amino acid ABC transporter, inner membrane subunit [Pseudomonas mendocina NK-01] Length = 365 Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 39/94 (41%), Positives = 62/94 (65%), Gaps = 6/94 (6%) Query: 264 PEFMSLYIALSC------YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317 PE MSL L + AA+IAE+VR G+ A+P+GQ EAA A+GL + + LV+LP Sbjct: 222 PEGMSLDKLLRALVMVIFFEAAYIAEVVRGGMQAIPKGQYEAAAAMGLGYWRTMGLVILP 281 Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 QA++ +IP + + ++ L K++SL + +G DL++ Sbjct: 282 QALKLVIPGIVNTFIALFKDTSLVIIIGLFDLLN 315 >gi|298379891|ref|ZP_06989496.1| glnP [Escherichia coli FVEC1302] gi|298279589|gb|EFI21097.1| glnP [Escherichia coli FVEC1302] Length = 159 Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 40/129 (31%), Positives = 78/129 (60%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + + + + A+IAEI R ++++ +G EA +ALGL+ + R V+LP A+R ++P Sbjct: 30 FTAAVVTIMINSGAYIAEITRGAVLSIHKGFREAGLALGLSRWETIRYVILPLALRRMLP 89 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PL +Q++ +K++SL + +G A+L G II +A+EI YL ++++++ + Sbjct: 90 PLGNQWIISIKDTSLFIVIGVAELTRQGQEIIAGNFRALEIWSAVAVFYLIITLVLSFIL 149 Query: 386 NRLNAKIAL 394 RL ++ + Sbjct: 150 RRLERRMKI 158 >gi|172062268|ref|YP_001809919.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria MC40-6] gi|171994785|gb|ACB65703.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria MC40-6] Length = 221 Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 69/238 (28%), Positives = 116/238 (48%), Gaps = 25/238 (10%) Query: 160 DHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKAL 219 D S+V P+ + L +GL+ LT+ + +LG VLSL SR Sbjct: 4 DFSVVWPYWLVLA-KGLA---LTLAFTVTCALVGSLLGFVLSLLRMSPSRWLRGP----- 54 Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279 ++ F+ F T +LI L + + F PV+ + P ++S+ I+L+ Y AA Sbjct: 55 ----VTAFVEFFRGTPLLIQL-FWVFFCFPVVLRLPI-------PPYLSVLISLTLYMAA 102 Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339 +E R L ++ Q +A IAL L+ V+ PQA+ IPPL S ++L K S+ Sbjct: 103 ITSETFRGSLKSIAGEQHDACIALSLSPHVKIVYVIFPQALLRAIPPLLSNVVSLFKESA 162 Query: 340 LAVAVGFADLVSVGGTIINQTGQAIE----IILIWMFIYLSLSIMIALFMNRLNAKIA 393 L +VG ADL+ VG + N T + +E + +I+ + L+ ++ + +R+ + A Sbjct: 163 LISSVGIADLMFVGQNVSNSTARPVEFLTTVAVIYFLVAFPLTRLVGVVESRMLRRYA 220 >gi|238798473|ref|ZP_04641953.1| Glutamine transport system permease protein glnP [Yersinia mollaretii ATCC 43969] gi|238717711|gb|EEQ09547.1| Glutamine transport system permease protein glnP [Yersinia mollaretii ATCC 43969] Length = 218 Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 41/118 (34%), Positives = 72/118 (61%) Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 + A+IAEI R ++++ G EA +ALGL+ R R V+ P A+R ++PPL +Q++ +K Sbjct: 100 SGAYIAEITRGAVLSIHNGFREAGLALGLSKRDTLRYVIAPLALRRMLPPLGNQWIVSIK 159 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394 ++SL + +G A+L G II +A+EI IYL +++ ++ + RL K+ + Sbjct: 160 DTSLFIVIGVAELTRQGQEIIAGNFRAMEIWSAVAVIYLIITLALSFVLRRLERKLKI 217 >gi|28869962|ref|NP_792581.1| amino acid ABC transporter permease [Pseudomonas syringae pv. tomato str. DC3000] gi|28853207|gb|AAO56276.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tomato str. DC3000] Length = 220 Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 47/164 (28%), Positives = 89/164 (54%), Gaps = 11/164 (6%) Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292 P LVLI L Y F P LG + S + LS Y A++ E+ R+GL+++ Sbjct: 68 PILVLILLIY---FALPGLG--------IRLDKLASFVVTLSLYAGAYLTEVFRAGLLSI 116 Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352 +GQ EA +A+GL + +++P +R+++P L++ +++L K++SLA A+ +L Sbjct: 117 HKGQREAGLAIGLGEWQVRAYIIVPVMLRNVLPALSNNFISLFKDTSLAAAIAVPELTYY 176 Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 I ++ + IE L+ +Y+ +IA+ + L ++A++ Sbjct: 177 ARKINVESYRVIETWLVTTALYVVACYVIAMLLRTLEQRLAIRR 220 >gi|193066391|ref|ZP_03047439.1| L-cystine ABC transporter, permease protein [Escherichia coli E22] gi|194429920|ref|ZP_03062430.1| L-cystine ABC transporter, permease protein [Escherichia coli B171] gi|260844322|ref|YP_003222100.1| putative transporter subunit [Escherichia coli O103:H2 str. 12009] gi|192925976|gb|EDV80622.1| L-cystine ABC transporter, permease protein [Escherichia coli E22] gi|194412009|gb|EDX28321.1| L-cystine ABC transporter, permease protein [Escherichia coli B171] gi|257759469|dbj|BAI30966.1| predicted transporter subunit [Escherichia coli O103:H2 str. 12009] gi|323158598|gb|EFZ44612.1| L-cystine transport system permease protein tcyB [Escherichia coli E128010] Length = 222 Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 62/207 (29%), Positives = 109/207 (52%), Gaps = 18/207 (8%) Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251 F +LG +L+L RLS + + L YIS F G P LIA + +++ P Sbjct: 32 FGLLLGFILALM--RLSPIWPVRW---LARFYISIFR--GTP---LIAQLFMIYYGLP-- 79 Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311 QF G + P S I LS TAA+ AE +R+ + ++ +GQ EAA ++G+T + Sbjct: 80 -QF----GIELDP-IPSAMIGLSLNTAAYAAETLRAAISSIDKGQWEAAASIGMTPWQTM 133 Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371 R +LPQA R +PPL++ +++L+K++SLA + +L I ++T + + L Sbjct: 134 RRAILPQAARVALPPLSNSFISLVKDTSLAATIQVPELFRQAQLITSRTLEVFTMYLAAS 193 Query: 372 FIYLSLSIMIALFMNRLNAKIALKEKK 398 IY ++ +++ N ++ +E++ Sbjct: 194 LIYWIMATVLSTLQNHFENQLNRQERE 220 Score = 37.4 bits (85), Expect = 4.2, Method: Compositional matrix adjust. Identities = 28/97 (28%), Positives = 45/97 (46%), Gaps = 8/97 (8%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G T L+ GM ++G ++ RLS V W+ R Y+ +FR P + +F + Sbjct: 15 LLKGAEYTLQLSIGGMFFGLLLGFILALMRLSPIWPVRWLARFYISIFRGTPLIAQLFMI 74 Query: 149 YKSV----LSVLPIPDHSIVLPFGMFLNNRGLSFPTL 181 Y + + + PIP I G+ LN + TL Sbjct: 75 YYGLPQFGIELDPIPSAMI----GLSLNTAAYAAETL 107 >gi|291563078|emb|CBL41894.1| amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [butyrate-producing bacterium SS3/4] Length = 229 Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 64/192 (33%), Positives = 100/192 (52%), Gaps = 18/192 (9%) Query: 207 LSRHFHEKTGKALPLLYISTF---LIFGLPTLVLIALKYQLHFDKPV-LGQFNFIGGSTV 262 L R + GK PL I+T +I G P L+ + Y +F P L FN Sbjct: 45 LMRRSNVGIGKFKPLRLIATVYVEIIRGTPILLQL---YFFYFMLPTWLPFFNL------ 95 Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322 EF + A + A++ EIVR+G+ AV GQ EAA +LGL R+ ++LPQA+++ Sbjct: 96 -SEFTCVMTACCVNSTAYVCEIVRAGIQAVDVGQTEAARSLGLNARQTMIHIVLPQAVKN 154 Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS----LS 378 I+P L ++++ ++K +SLA +L++ TI T + +E + I IY +S Sbjct: 155 ILPALCNEFVAIVKETSLASTFFIGELMTQFKTINGLTFRVLEPLTIVGIIYFGVTFIMS 214 Query: 379 IMIALFMNRLNA 390 +IAL R+NA Sbjct: 215 KLIALLERRMNA 226 >gi|218682669|ref|ZP_03530270.1| amino acid ABC transporter permease [Rhizobium etli CIAT 894] Length = 219 Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 39/114 (34%), Positives = 67/114 (58%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P +++ +AL+ ++AAF+AEI R + ++ RGQ EA+ +LG+ + R V+LPQA+R Sbjct: 84 PAWLAAGLALTLWSAAFLAEIWRGCVESIARGQWEASASLGMVRLQQMRYVILPQALRVA 143 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377 IPP + ++K ++L +GF +L G + N T Q + + IY +L Sbjct: 144 IPPTVGFSVQIVKGTALTSIIGFVELSKAGTVVTNATFQPFTVYGLVALIYFAL 197 >gi|170748675|ref|YP_001754935.1| polar amino acid ABC transporter, inner membrane subunit [Methylobacterium radiotolerans JCM 2831] gi|170655197|gb|ACB24252.1| polar amino acid ABC transporter, inner membrane subunit [Methylobacterium radiotolerans JCM 2831] Length = 230 Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 44/164 (26%), Positives = 90/164 (54%), Gaps = 5/164 (3%) Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE---FMSLYIALSCYTAAFIAEIVRSGLI 290 +L L+ + + +F P +G ++ GST + F S I + AA+ +EI+R+G+ Sbjct: 67 SLPLVLVIFWFYFLVPYIG--AYLTGSTTPIQVGAFPSALITFMAFEAAYFSEIMRAGIQ 124 Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 ++P+GQ AA ALG+ + + V+LPQA R+++P L +Q + L +++SL + D + Sbjct: 125 SIPKGQTAAAQALGMNYWQTMGNVILPQAFRNMLPLLLTQTIILFQDTSLVYVLSLTDFM 184 Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394 + + G+ +E+ + +Y ++ + + RL ++A+ Sbjct: 185 GAASKVAQRDGRLVEMYVFAAVVYFAICFSASYLVRRLQRRVAI 228 >gi|320547997|ref|ZP_08042278.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus equinus ATCC 9812] gi|320447343|gb|EFW88105.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus equinus ATCC 9812] Length = 523 Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 39/109 (35%), Positives = 65/109 (59%) Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 +S T A+++EIVR G+ AV +GQ EAA ALG TH + R ++LPQ +R+I+P ++++ Sbjct: 386 VSINTGAYMSEIVRGGIFAVDKGQFEAATALGFTHAQTMRKIVLPQVVRNILPATGNEFV 445 Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 +K++S+ + +L G T+ QT Q + I IY L+ + Sbjct: 446 INIKDTSVLNVISVVELYFSGNTVATQTYQYFQTFTIIAIIYFVLTFTV 494 >gi|229591449|ref|YP_002873568.1| putative amino acid ABC transporter permease [Pseudomonas fluorescens SBW25] gi|229363315|emb|CAY50433.1| putative amino acid ABC transporter, permease protein [Pseudomonas fluorescens SBW25] Length = 247 Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 51/174 (29%), Positives = 90/174 (51%), Gaps = 11/174 (6%) Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283 + +++ G+P L++I Y F P+L N G FM++ L Y +A++ E Sbjct: 66 VWVYVLRGIPLLMVIFWTY---FLVPLLIGHNITG-------FMTMLCTLVIYQSAYLCE 115 Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343 I+R G+ A+P GQ EA+ ALGL + + T V+LPQA+ + +P L SQ+++++K +SL Sbjct: 116 IIRGGIQALPAGQYEASRALGLGYVRTTVWVILPQALYNALPSLISQFISIIKETSLGYV 175 Query: 344 VGFADLVSVGGTIINQ-TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 + ++ + NQ + ++ I IY L + + +IA K Sbjct: 176 INVQEVTFAANQVNNQLLTKPFQVFFILAIIYYLLCFGLTRLAGWVEQRIARKR 229 >gi|189022725|ref|YP_001932466.1| Cystine transport system permease protein [Brucella abortus S19] gi|237817022|ref|ZP_04596014.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Brucella abortus str. 2308 A] gi|260756561|ref|ZP_05868909.1| polar amino acid ABC transporter [Brucella abortus bv. 6 str. 870] gi|260763232|ref|ZP_05875564.1| polar amino acid ABC transporter [Brucella abortus bv. 2 str. 86/8/59] gi|260882379|ref|ZP_05893993.1| amino acid ABC transporter permease [Brucella abortus bv. 9 str. C68] gi|261216130|ref|ZP_05930411.1| polar amino acid ABC transporter [Brucella abortus bv. 3 str. Tulya] gi|297249512|ref|ZP_06933213.1| polar amino acid transport system permease [Brucella abortus bv. 5 str. B3196] gi|189021299|gb|ACD74020.1| Cystine transport system permease protein [Brucella abortus S19] gi|237787835|gb|EEP62051.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Brucella abortus str. 2308 A] gi|260673653|gb|EEX60474.1| polar amino acid ABC transporter [Brucella abortus bv. 2 str. 86/8/59] gi|260676669|gb|EEX63490.1| polar amino acid ABC transporter [Brucella abortus bv. 6 str. 870] gi|260871907|gb|EEX78976.1| amino acid ABC transporter permease [Brucella abortus bv. 9 str. C68] gi|260917737|gb|EEX84598.1| polar amino acid ABC transporter [Brucella abortus bv. 3 str. Tulya] gi|297173381|gb|EFH32745.1| polar amino acid transport system permease [Brucella abortus bv. 5 str. B3196] Length = 250 Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 40/126 (31%), Positives = 77/126 (61%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + I + A+ +EI+R+ + +VP+GQ EAA ++G++ R+A +LPQA R+ +P Sbjct: 113 FPAALIGFTLNIGAYSSEIIRTVISSVPKGQWEAAYSIGMSWRQALIRTILPQATRTAVP 172 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PL++ +++L+K++SLA A+ +L I+ T + + + + IYL+LS +++ Sbjct: 173 PLSNTFISLIKDTSLAAAITVPELFQSAQRIVATTYEPLILYIEAALIYLALSSILSALQ 232 Query: 386 NRLNAK 391 RL + Sbjct: 233 VRLERR 238 >gi|238784074|ref|ZP_04628089.1| Glutamine transport system permease protein glnP [Yersinia bercovieri ATCC 43970] gi|238788814|ref|ZP_04632605.1| Glutamine transport system permease protein glnP [Yersinia frederiksenii ATCC 33641] gi|238715051|gb|EEQ07048.1| Glutamine transport system permease protein glnP [Yersinia bercovieri ATCC 43970] gi|238723119|gb|EEQ14768.1| Glutamine transport system permease protein glnP [Yersinia frederiksenii ATCC 33641] Length = 218 Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 41/118 (34%), Positives = 72/118 (61%) Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 + A+IAEI R ++++ G EA +ALGL+ R R V+ P A+R ++PPL +Q++ +K Sbjct: 100 SGAYIAEITRGAVLSIHNGFREAGLALGLSKRDTLRYVIAPLALRRMLPPLGNQWIVSIK 159 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394 ++SL + +G A+L G II +A+EI IYL +++ ++ + RL K+ + Sbjct: 160 DTSLFIVIGVAELTRQGQEIIAGNFRAMEIWSAVAVIYLIITLALSFVLRRLERKLKI 217 >gi|331268245|ref|YP_004394737.1| amino acid ABC transporter permease [Clostridium botulinum BKT015925] gi|329124795|gb|AEB74740.1| amino acid ABC transporter, permease protein [Clostridium botulinum BKT015925] Length = 235 Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 61/194 (31%), Positives = 109/194 (56%), Gaps = 27/194 (13%) Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224 LPF FLN G++ L++ T + S +LG V +L +LSR K +A+ ++I Sbjct: 15 LPF--FLNGAGITI-ILSLIT----VLLSSILGTVFALM--KLSRI---KILRAISTIFI 62 Query: 225 STFLIFGLPTLVLIALKYQLHFDKP--------VLGQFNFIGGSTVSPEFMSLYIALSCY 276 ++ G P LV + Y ++ P L Q + +G + + +AL+ Sbjct: 63 E--IVRGTPLLVQV---YIFYYGIPEVLENIGVYLPQIDIMGNDFTGLSMIVITLALN-- 115 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 + A++AEI+R G+ ++ +GQ+EAA +LGLT A R V++PQA+++I+P L ++++ ++K Sbjct: 116 STAYVAEIIRGGIESINKGQIEAARSLGLTQSMAMRYVIIPQAIKNILPALGNEFITVIK 175 Query: 337 NSSLAVAVGFADLV 350 SS+ VG +L+ Sbjct: 176 ESSIVSVVGIKELM 189 >gi|222148882|ref|YP_002549839.1| ABC transporter membrane spanning protein (amino acid) [Agrobacterium vitis S4] gi|221735868|gb|ACM36831.1| ABC transporter membrane spanning protein (amino acid) [Agrobacterium vitis S4] Length = 395 Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 31/82 (37%), Positives = 60/82 (73%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + +S +++A++AE++R GL A+P+GQ E A +LGL++ + RL++LPQA++ +IP + + Sbjct: 263 VGVSIFSSAYMAEVIRGGLQAIPKGQFEGADSLGLSYWQKIRLIVLPQAIKLVIPGIVNT 322 Query: 331 YLNLLKNSSLAVAVGFADLVSV 352 ++ L K++SL +G DL+ + Sbjct: 323 FIGLFKDTSLVSIIGMFDLLGI 344 >gi|192291279|ref|YP_001991884.1| polar amino acid ABC transporter inner membrane subunit [Rhodopseudomonas palustris TIE-1] gi|192285028|gb|ACF01409.1| polar amino acid ABC transporter, inner membrane subunit [Rhodopseudomonas palustris TIE-1] Length = 362 Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 35/81 (43%), Positives = 57/81 (70%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + L+ + A++AE+VR GL AVPRGQ EAA+ALGL + ++ RL++LPQA+R+++P L + Sbjct: 232 VMLALFWTAYVAEVVRGGLQAVPRGQEEAALALGLGYWRSMRLIVLPQALRAVVPGLVNL 291 Query: 331 YLNLLKNSSLAVAVGFADLVS 351 + L +SL +G D++ Sbjct: 292 GIGFLLATSLLAVIGIMDIIG 312 >gi|324989902|gb|EGC21844.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK353] Length = 521 Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 40/106 (37%), Positives = 65/106 (61%) Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 +S T A+++EIVR G+ AV +GQ EAA ALG+TH + R ++LPQ +R+I+P ++++ Sbjct: 383 VSINTGAYMSEIVRGGIFAVDKGQFEAATALGMTHGQTMRKIVLPQVVRNILPATGNEFV 442 Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378 +K++S+ + +L G TI QT Q + I IY L+ Sbjct: 443 INIKDTSVLNVISVVELYFSGNTIATQTYQYFQTFTIIAVIYFVLT 488 Score = 37.7 bits (86), Expect = 3.5, Method: Compositional matrix adjust. Identities = 28/88 (31%), Positives = 40/88 (45%), Gaps = 11/88 (12%) Query: 96 TFWLAFSGMIPATIIGTLVGAGRL---SANKLVA-------WICRVYVEVFRNIPPLVVI 145 T ++ +G I IIG L+G R S NKL+A W VY+E+FR P +V Sbjct: 299 TLLISITGTIAGLIIGLLIGVYRTAPASKNKLLASLQKIFGWFLNVYIEIFRGTPMIVQS 358 Query: 146 FFLYKSVLSVLPIP-DHSIVLPFGMFLN 172 +Y I D +I F + +N Sbjct: 359 MVIYYGTAQAFGISIDRTIAAIFIVSIN 386 >gi|126668365|ref|ZP_01739323.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Marinobacter sp. ELB17] gi|126627181|gb|EAZ97820.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Marinobacter sp. ELB17] Length = 361 Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 34/87 (39%), Positives = 61/87 (70%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 + M I ++ + +A++AE+VR GL A+P+GQ EAA ALGL + + T LV+LPQA+ +I Sbjct: 225 KLMRALIGITLWQSAYMAEVVRGGLQAIPKGQYEAASALGLGYWRKTGLVVLPQALTLVI 284 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVS 351 P + + +++L K+++L + +G D++ Sbjct: 285 PGIVNTFISLFKDTTLVLIIGLFDILG 311 Score = 40.4 bits (93), Expect = 0.53, Method: Compositional matrix adjust. Identities = 25/69 (36%), Positives = 42/69 (60%), Gaps = 2/69 (2%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151 G + T LA+ G++ A IGT++ GR S ++ +C V++EV+R +P + V+F S Sbjct: 153 GLMLTLILAYVGILAALPIGTILALGRRSDMPIIRGMCVVFIEVWRAVPLITVLFM--AS 210 Query: 152 VLSVLPIPD 160 V+ L +PD Sbjct: 211 VMLPLFLPD 219 >gi|152995146|ref|YP_001339981.1| polar amino acid ABC transporter inner membrane subunit [Marinomonas sp. MWYL1] gi|150836070|gb|ABR70046.1| polar amino acid ABC transporter, inner membrane subunit [Marinomonas sp. MWYL1] Length = 236 Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 66/198 (33%), Positives = 102/198 (51%), Gaps = 13/198 (6%) Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247 ++ + S VLG + +L L+R +A+P YI F G P LV I L Y Sbjct: 22 QLVLISIVLGGIFAL-PIALARISPVAWIRAIPFAYI--FFFRGTPLLVQIFLVYYGA-- 76 Query: 248 KPVLGQFNFIGGSTVSPEFMSLY----IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 QF+ + S + P Y IA + T+A+ AEI R + A+P+G++EA + Sbjct: 77 ----SQFDAVRESFLWPILREPYWCAIIAFTLNTSAYTAEIFRGAIQAIPQGEVEACKVI 132 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363 G+T + R VLLP+A ++P ++ + +LK S+LA + DL + TII +T Sbjct: 133 GMTKFQMYRRVLLPRAFGIVLPAYGNEIILMLKGSALASTITILDLTGMARTIIARTYTP 192 Query: 364 IEIILIWMFIYLSLSIMI 381 +EI L IYL +SI+I Sbjct: 193 MEIFLAAGAIYLVISIVI 210 >gi|23500425|ref|NP_699865.1| amino acid ABC transporter permease [Brucella suis 1330] gi|23464048|gb|AAN33870.1| amino acid ABC transporter, permease protein [Brucella suis 1330] Length = 226 Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 40/126 (31%), Positives = 78/126 (61%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + I+ + A+ +EI+R+ + +VP+GQ EAA ++G++ R+A +LPQA R+ +P Sbjct: 89 FPAALISFTLNIGAYSSEIIRAVISSVPKGQWEAAYSIGMSWRQALIRTILPQATRTAVP 148 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PL++ +++L+K++SLA A+ +L I+ T + + + + IYL+LS +++ Sbjct: 149 PLSNTFISLIKDTSLAAAITVPELFQSAQRIVATTYEPLILYIEAALIYLALSSILSALQ 208 Query: 386 NRLNAK 391 RL + Sbjct: 209 VRLERR 214 >gi|257899437|ref|ZP_05679090.1| amino acid ABC transporter [Enterococcus faecium Com15] gi|257837349|gb|EEV62423.1| amino acid ABC transporter [Enterococcus faecium Com15] Length = 526 Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 66/237 (27%), Positives = 113/237 (47%), Gaps = 38/237 (16%) Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLF------ATRLSRHFHEKTGKALPLL 222 MFL GL+ + T V LG+++ +F L+R F +K G AL + Sbjct: 296 MFLRGAGLTLFIALIGT-----VVGTTLGLLIGVFRSVPESGNALTRFF-QKIGNALLSI 349 Query: 223 YISTFLIFGLPTLVL-------IALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSC 275 Y+ F G P +V +AL + + ++ + +L+I +S Sbjct: 350 YVEIFR--GTPMMVQAMVIFYGLALAFGISLNRTI----------------AALFI-VSL 390 Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335 T A++ EIVR G+ AV GQ EAA A+G+TH + R V++PQ +R+I+P ++++ + Sbjct: 391 NTGAYMTEIVRGGIFAVDEGQFEAAQAIGMTHGQTMRKVVIPQVLRNILPATGNEFVINI 450 Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 K++++ +G ADL G + Q + I IYL ++ I + + KI Sbjct: 451 KDTAVLSVIGVADLFFQGNSASGANFQFFQTFTIVGIIYLVMTFTITRILRAVEKKI 507 >gi|145221452|ref|YP_001132130.1| polar amino acid ABC transporter, inner membrane subunit [Mycobacterium gilvum PYR-GCK] gi|145213938|gb|ABP43342.1| amino acid ABC transporter membrane protein, PAAT family / amino acid ABC transporter substrate-binding protein, PAAT family [Mycobacterium gilvum PYR-GCK] Length = 598 Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 62/206 (30%), Positives = 105/206 (50%), Gaps = 20/206 (9%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 + +LG+ L++ SR + T + GLP +V+I L Sbjct: 388 IIGLILGMALAIAGISKSRWLRWPA-------RVYTDIFRGLPEVVIILLIG-------- 432 Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 LG +G T + F AL AA++ EI RSG+ +V GQ+EA+ ALG ++ + Sbjct: 433 LGVGPVVGHLTNNNPFPLGIAALGLMAAAYVGEIFRSGIQSVDPGQLEASRALGFSYSTS 492 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF----ADLVSVGGTIINQTGQAIEI 366 RLV++PQ +R ++P L +Q+++LLK SSL +G +L VG + QTG + Sbjct: 493 MRLVVVPQGVRRVLPALMNQFISLLKASSLVYFLGLIANQRELFQVGRDLNAQTGNLSPL 552 Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKI 392 + +F YL+L+I + +N ++ ++ Sbjct: 553 VAAGLF-YLALTIPLTHLVNYIDVRL 577 Score = 36.6 bits (83), Expect = 7.6, Method: Compositional matrix adjust. Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 3/71 (4%) Query: 91 VGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYK 150 G NT L I I+G + +S ++ + W RVY ++FR +P +V+I + Sbjct: 374 TGLPNTLILTICASIIGLILGMALAIAGISKSRWLRWPARVYTDIFRGLPEVVIILLIG- 432 Query: 151 SVLSVLPIPDH 161 L V P+ H Sbjct: 433 --LGVGPVVGH 441 >gi|311279324|ref|YP_003941555.1| polar amino acid ABC transporter, inner membrane subunit [Enterobacter cloacae SCF1] gi|308748519|gb|ADO48271.1| polar amino acid ABC transporter, inner membrane subunit [Enterobacter cloacae SCF1] Length = 243 Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 71/216 (32%), Positives = 109/216 (50%), Gaps = 29/216 (13%) Query: 189 IFVFSFVLGIVLSL--FATRLSRHFHEKTGKALPLL------YISTFLIFGLPTLVLIAL 240 +F+ +FV G +L++ A R+SR PLL YI F G P L+ + L Sbjct: 25 LFISAFVCGGILAVGVLAMRMSRW---------PLLSGFAKGYILVFR--GSPLLIQLFL 73 Query: 241 KYQLHFDKPVLGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296 Y LGQF I S + P F+ +ALS TAA+ AEI+R L+AVP GQ Sbjct: 74 IYY------GLGQFGVIRHSFLWPLLREPFICAVLALSLCTAAYTAEILRGALLAVPPGQ 127 Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356 +EA A G++ R ++ P +R +P +++ + L+K+++LA V D+ V I Sbjct: 128 IEAGQACGMSRFLLLRRIIAPVMLRYALPAYSTEAILLVKSTALASLVTVWDVTGVAQQI 187 Query: 357 INQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 I +T + +E+ L IYL L+ +I L K+ Sbjct: 188 IQRTYRTMEVFLCAAAIYLLLNFIIVQLYALLERKL 223 >gi|296160743|ref|ZP_06843557.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. Ch1-1] gi|295889046|gb|EFG68850.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. Ch1-1] Length = 251 Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 47/147 (31%), Positives = 82/147 (55%), Gaps = 4/147 (2%) Query: 251 LGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306 +GQF I S + P +M ++L+ TA + AEI+R GL+ VP GQ+EA ++GL+ Sbjct: 78 MGQFGVIRESFLWPVLREPYMCAVLSLALCTAGYTAEIIRGGLMTVPVGQIEAGYSIGLS 137 Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 R V+ P A+R +P +++ + L+K+++LA V ++ V II QT + E+ Sbjct: 138 GFALLRRVIGPIALRQCLPAYSTEAVLLVKSTALASLVTVWEVTGVAQQIIQQTYRTTEV 197 Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIA 393 + IYL L+ +I + L +++ Sbjct: 198 FICAALIYLFLNFVIVRLLGLLETRLS 224 >gi|261409441|ref|YP_003245682.1| ectoine/hydroxyectoine ABC transporter permease EhuC [Paenibacillus sp. Y412MC10] gi|261285904|gb|ACX67875.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC [Paenibacillus sp. Y412MC10] Length = 217 Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 69/226 (30%), Positives = 117/226 (51%), Gaps = 22/226 (9%) Query: 173 NRGLSF-PTLTMDTNAKIFV--FSFVLGIVLSLFA--TRLSRHFHEKTGKALPLLYISTF 227 N + F PTL I V FS +L I +S A RLS+ + +T A+ Y+ F Sbjct: 3 NSWIDFLPTLLKGAEITIIVAFFSAILAIAMSFAAGLCRLSKLWIVRTATAV---YVEIF 59 Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287 T +L+ L + L+F P FIG P+ ++ +A+ A+ +EIVRS Sbjct: 60 R----GTSLLVQL-FWLYFALP------FIGIEL--PKMLAAILAIGLNFGAYGSEIVRS 106 Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347 ++AVP+GQ EAA+AL + + V+LPQA ++PP +Q + L+K++SL + A Sbjct: 107 AVLAVPKGQWEAAVALNMKPWQRLWNVILPQASLRMLPPFGNQLVELIKSTSLVYFITMA 166 Query: 348 DLVSVGGTIINQ-TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 DL + N EI+++ +F+Y ++ ++++ + L K+ Sbjct: 167 DLTYQAMVLRNNYISWTTEILVLLLFMYFVIATLVSMAVRLLERKL 212 >gi|170720092|ref|YP_001747780.1| polar amino acid ABC transporter inner membrane subunit [Pseudomonas putida W619] gi|169758095|gb|ACA71411.1| polar amino acid ABC transporter, inner membrane subunit [Pseudomonas putida W619] Length = 365 Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 38/94 (40%), Positives = 63/94 (67%), Gaps = 6/94 (6%) Query: 264 PEFMSL------YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317 PE MS I + + +A+IAE+VR GL A+P+GQ EAA A+GL + ++ LV+LP Sbjct: 222 PEGMSFDKLLRAMIGVILFQSAYIAEVVRGGLQAIPKGQYEAAAAMGLGYWRSMGLVILP 281 Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 QA++ +IP + + ++ L K++SL + +G DL++ Sbjct: 282 QALKLVIPGIVNTFIALFKDTSLVIIIGLFDLLN 315 >gi|284033080|ref|YP_003383011.1| polar amino acid ABC transporter inner membrane subunit [Kribbella flavida DSM 17836] gi|283812373|gb|ADB34212.1| polar amino acid ABC transporter, inner membrane subunit [Kribbella flavida DSM 17836] Length = 273 Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 47/129 (36%), Positives = 80/129 (62%), Gaps = 5/129 (3%) Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328 +++AL AA++AE++R+G+ AVP+GQ+EAA +LG+ ATR ++LPQA R ++PPLT Sbjct: 143 VWLALGIVAAAYMAEVIRAGIQAVPKGQVEAARSLGMPPGLATRKIVLPQAFRIVLPPLT 202 Query: 329 SQYLNLLKNSSLAVAVGFA----DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 + + L+K+SSL +G + +L G + N ++ F YL +++ + L Sbjct: 203 NDLILLVKDSSLVFIIGTSATAYELTGFGRELANTYANLTPLVTAG-FCYLLITLPLGLL 261 Query: 385 MNRLNAKIA 393 + RL +K A Sbjct: 262 VRRLESKAA 270 Score = 37.0 bits (84), Expect = 5.0, Method: Compositional matrix adjust. Identities = 24/86 (27%), Positives = 39/86 (45%), Gaps = 5/86 (5%) Query: 82 DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141 ++++ +L V T + I GTL+ RLS+ WI Y+E FR +P Sbjct: 57 EAAFRDGLLSALVKTLEYTAGAFVIGLIGGTLLALMRLSSVGPYRWIATAYIEFFRGLPA 116 Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPF 167 +VV S+LP+ + +PF Sbjct: 117 IVVFI-----AFSLLPLAFEGMRIPF 137 >gi|260564759|ref|ZP_05835244.1| cystine transport system permease [Brucella melitensis bv. 1 str. 16M] gi|265989983|ref|ZP_06102540.1| amino acid ABC transporter permease [Brucella melitensis bv. 1 str. Rev.1] gi|265992906|ref|ZP_06105463.1| polar amino acid ABC transporter [Brucella melitensis bv. 3 str. Ether] gi|260152402|gb|EEW87495.1| cystine transport system permease [Brucella melitensis bv. 1 str. 16M] gi|262763776|gb|EEZ09808.1| polar amino acid ABC transporter [Brucella melitensis bv. 3 str. Ether] gi|263000652|gb|EEZ13342.1| amino acid ABC transporter permease [Brucella melitensis bv. 1 str. Rev.1] Length = 250 Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 40/126 (31%), Positives = 77/126 (61%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + I + A+ +EI+R+ + +VP+GQ EAA ++G++ R+A +LPQA R+ +P Sbjct: 113 FPAALIGFTLNIGAYSSEIIRAVISSVPKGQWEAAYSIGMSWRQALIRTILPQATRTAVP 172 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PL++ +++L+K++SLA A+ +L I+ T + + + + IYL+LS +++ Sbjct: 173 PLSNTFISLIKDTSLAAAITVPELFQSAQRIVATTYEPLILYIEAALIYLALSSILSALQ 232 Query: 386 NRLNAK 391 RL + Sbjct: 233 VRLERR 238 >gi|227514604|ref|ZP_03944653.1| ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus fermentum ATCC 14931] gi|227087015|gb|EEI22327.1| ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus fermentum ATCC 14931] Length = 223 Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 59/210 (28%), Positives = 105/210 (50%), Gaps = 32/210 (15%) Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY-----QLHF 246 F ++G V + T SR + + LY+ F I +PT+VL+ L Y QLH Sbjct: 35 FGLIVGTVFGVLRTTKSRVL-----RFILRLYLEIFRI--IPTVVLLFLVYYILPRQLHI 87 Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306 + P ++M++ +A S + AA ++IVR + +VPR Q E+ +A+GLT Sbjct: 88 NMP--------------ADWMAV-LAFSLWVAAEFSDIVRGAIQSVPRHQRESGLAIGLT 132 Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 + R +LLPQAM+ +P + ++K +SL + + D+++VG II Sbjct: 133 RFQLFRYILLPQAMKLEVPAAINLATRVVKTTSLLMIISIMDVINVGQQIIEANNSTYPT 192 Query: 367 ILIWM-----FIYLSLSIMIALFMNRLNAK 391 + W+ F+Y + +++L+ +L A+ Sbjct: 193 GVFWVYGLIFFLYFIIDYLLSLWARKLTAR 222 Score = 42.0 bits (97), Expect = 0.15, Method: Compositional matrix adjust. Identities = 20/68 (29%), Positives = 42/68 (61%) Query: 82 DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141 + S + ++ G + W+A + I+GT+ G R + ++++ +I R+Y+E+FR IP Sbjct: 11 EGSNFSRLMGGLWVSVWIAVVSLFFGLIVGTVFGVLRTTKSRVLRFILRLYLEIFRIIPT 70 Query: 142 LVVIFFLY 149 +V++F +Y Sbjct: 71 VVLLFLVY 78 >gi|325697553|gb|EGD39439.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK160] Length = 521 Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 40/106 (37%), Positives = 65/106 (61%) Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 +S T A+++EIVR G+ AV +GQ EAA ALG+TH + R ++LPQ +R+I+P ++++ Sbjct: 383 VSINTGAYMSEIVRGGIFAVDKGQFEAATALGMTHGQTMRKIVLPQVVRNILPATGNEFV 442 Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378 +K++S+ + +L G TI QT Q + I IY L+ Sbjct: 443 INIKDTSVLNVISVVELYFSGNTIATQTYQYFQTFTIIAVIYFVLT 488 Score = 38.1 bits (87), Expect = 2.3, Method: Compositional matrix adjust. Identities = 29/88 (32%), Positives = 40/88 (45%), Gaps = 11/88 (12%) Query: 96 TFWLAFSGMIPATIIGTLVGAGRL---SANKLVA-------WICRVYVEVFRNIPPLVVI 145 T ++ +G I IIG L+G R S NKL+A W VY+EVFR P +V Sbjct: 299 TLLISITGTIAGLIIGLLIGVYRTAPASKNKLLASLQKIFGWFLNVYIEVFRGTPMIVQS 358 Query: 146 FFLYKSVLSVLPIP-DHSIVLPFGMFLN 172 +Y I D +I F + +N Sbjct: 359 MVIYYGTAQAFGISIDRTIAAIFIVSIN 386 >gi|255994765|ref|ZP_05427900.1| amino acid ABC transporter, permease protein [Eubacterium saphenum ATCC 49989] gi|255993478|gb|EEU03567.1| amino acid ABC transporter, permease protein [Eubacterium saphenum ATCC 49989] Length = 220 Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 40/127 (31%), Positives = 76/127 (59%), Gaps = 1/127 (0%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 EF + A AA+ AEI R G+ ++ +GQ EAA ALG+ + + ++LPQAM++++ Sbjct: 85 EFETAAFAFVLNYAAYFAEIYRGGINSIDKGQYEAAFALGVPRWRTMKDIILPQAMKAML 144 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 PP+ ++ + L+K+++LA A+ D++ V ++++ I+I L IYL L+ + + Sbjct: 145 PPIANEAIVLIKDTALASAITLMDIMKVSQAVVSRNSD-IKIFLYAAVIYLILTGITTII 203 Query: 385 MNRLNAK 391 R+ + Sbjct: 204 AKRIEKR 210 >gi|239833265|ref|ZP_04681593.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium LMG 3301] gi|239821328|gb|EEQ92897.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium LMG 3301] Length = 231 Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 62/198 (31%), Positives = 91/198 (45%), Gaps = 24/198 (12%) Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251 F LG + A RL + + + PLL I + FGLPTL Sbjct: 36 FIVALGRITPSRALRLIAATYVQLIQGTPLLVIMFIIYFGLPTL---------------- 79 Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311 G +++P F + I+L+ Y +A++ EI R L +VP+ Q E A L L+ + Sbjct: 80 -------GFSITPLFAA-GISLTIYVSAYLGEIWRGCLESVPKAQWEGAECLALSRTQRM 131 Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371 V+LPQA+R PP + ++KN+SLA VGF +L G I N + I LI Sbjct: 132 FKVILPQAVRIATPPTVGFSVQIVKNTSLASVVGFVELTRAGQLINNSIFEPFLIYLIVA 191 Query: 372 FIYLSLSIMIALFMNRLN 389 +Y L ++ F RL Sbjct: 192 ALYFCLCFPLSAFSQRLE 209 >gi|28896781|ref|NP_796386.1| amino acid ABC transporter permease [Vibrio parahaemolyticus RIMD 2210633] gi|260362451|ref|ZP_05775393.1| amino acid ABC transporter, permease protein [Vibrio parahaemolyticus K5030] gi|260876541|ref|ZP_05888896.1| amino acid ABC transporter, permease protein [Vibrio parahaemolyticus AN-5034] gi|260897402|ref|ZP_05905898.1| amino acid ABC transporter, permease protein [Vibrio parahaemolyticus Peru-466] gi|28804989|dbj|BAC58270.1| amino acid ABC transproter, permease protein [Vibrio parahaemolyticus RIMD 2210633] gi|308087935|gb|EFO37630.1| amino acid ABC transporter, permease protein [Vibrio parahaemolyticus Peru-466] gi|308090363|gb|EFO40058.1| amino acid ABC transporter, permease protein [Vibrio parahaemolyticus AN-5034] gi|308111819|gb|EFO49359.1| amino acid ABC transporter, permease protein [Vibrio parahaemolyticus K5030] Length = 223 Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 57/171 (33%), Positives = 94/171 (54%), Gaps = 17/171 (9%) Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV-LIAL 240 TM+ VFS +L ++L+ R F L LYIS F G P LV L L Sbjct: 22 TMEMATWGLVFSLILAVILANI-----RVFKLPVLDQLSQLYISFFR--GTPLLVQLFLL 74 Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300 Y L PV+ + F + I L+ + AA++AE +R+ +I + R QMEA+ Sbjct: 75 YYGLPQIFPVMVGID---------AFSAAVIGLTLHFAAYMAESIRAAIIGIDRNQMEAS 125 Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 +++G+T +A R V+LPQA R +P L + +++++K++SLA +G A++++ Sbjct: 126 LSVGMTTPQAMRRVILPQATRVALPSLMNYFIDMIKSTSLAFTLGVAEIMA 176 >gi|327468260|gb|EGF13745.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK330] Length = 521 Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 40/106 (37%), Positives = 65/106 (61%) Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 +S T A+++EIVR G+ AV +GQ EAA ALG+TH + R ++LPQ +R+I+P ++++ Sbjct: 383 VSINTGAYMSEIVRGGIFAVDKGQFEAATALGMTHGQTMRKIVLPQVVRNILPATGNEFV 442 Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378 +K++S+ + +L G TI QT Q + I IY L+ Sbjct: 443 INIKDTSVLNVISVVELYFSGNTIATQTYQYFQTFTIIAVIYFVLT 488 Score = 37.7 bits (86), Expect = 3.4, Method: Compositional matrix adjust. Identities = 28/88 (31%), Positives = 40/88 (45%), Gaps = 11/88 (12%) Query: 96 TFWLAFSGMIPATIIGTLVGAGRL---SANKLVA-------WICRVYVEVFRNIPPLVVI 145 T ++ +G I IIG L+G R S NKL+A W VY+E+FR P +V Sbjct: 299 TLLISITGTIAGLIIGLLIGVYRTAPASKNKLLASLQKIFGWFLNVYIEIFRGTPMIVQS 358 Query: 146 FFLYKSVLSVLPIP-DHSIVLPFGMFLN 172 +Y I D +I F + +N Sbjct: 359 MVIYYGTAQAFGISIDRTIAAIFIVSIN 386 >gi|315446796|ref|YP_004079675.1| amino acid ABC transporter substrate-binding protein, PAAT family ;amino acid ABC transporter membrane protein, PAAT family [Mycobacterium sp. Spyr1] gi|315265099|gb|ADU01841.1| amino acid ABC transporter substrate-binding protein, PAAT family ;amino acid ABC transporter membrane protein, PAAT family [Mycobacterium sp. Spyr1] Length = 598 Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 62/206 (30%), Positives = 105/206 (50%), Gaps = 20/206 (9%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 + +LG+ L++ SR + T + GLP +V+I L Sbjct: 388 IIGLILGMALAIAGISKSRWLRWPA-------RVYTDIFRGLPEVVIILLIG-------- 432 Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 LG +G T + F AL AA++ EI RSG+ +V GQ+EA+ ALG ++ + Sbjct: 433 LGVGPVVGHLTNNNPFPLGIAALGLMAAAYVGEIFRSGIQSVDPGQLEASRALGFSYSTS 492 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF----ADLVSVGGTIINQTGQAIEI 366 RLV++PQ +R ++P L +Q+++LLK SSL +G +L VG + QTG + Sbjct: 493 MRLVVVPQGVRRVLPALMNQFISLLKASSLVYFLGLIANQRELFQVGRDLNAQTGNLSPL 552 Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKI 392 + +F YL+L+I + +N ++ ++ Sbjct: 553 VAAGLF-YLALTIPLTHLVNYIDVRL 577 Score = 36.6 bits (83), Expect = 7.4, Method: Compositional matrix adjust. Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 3/71 (4%) Query: 91 VGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYK 150 G NT L I I+G + +S ++ + W RVY ++FR +P +V+I + Sbjct: 374 TGLPNTLILTICASIIGLILGMALAIAGISKSRWLRWPARVYTDIFRGLPEVVIILLIG- 432 Query: 151 SVLSVLPIPDH 161 L V P+ H Sbjct: 433 --LGVGPVVGH 441 >gi|261220512|ref|ZP_05934793.1| amino acid ABC transporter permease [Brucella ceti B1/94] gi|265996140|ref|ZP_06108697.1| amino acid ABC transporter permease [Brucella ceti M490/95/1] gi|260919096|gb|EEX85749.1| amino acid ABC transporter permease [Brucella ceti B1/94] gi|262550437|gb|EEZ06598.1| amino acid ABC transporter permease [Brucella ceti M490/95/1] Length = 250 Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 40/126 (31%), Positives = 77/126 (61%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + I + A+ +EI+R+ + +VP+GQ EAA ++G++ R+A +LPQA R+ +P Sbjct: 113 FPAALIGFTLNIGAYSSEIIRAVISSVPKGQWEAAYSIGMSWRQALIRTILPQATRTAVP 172 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PL++ +++L+K++SLA A+ +L I+ T + + + + IYL+LS +++ Sbjct: 173 PLSNTFISLIKDTSLAAAITVPELFQSAQRIVATTYEPLILYIEAALIYLALSSILSALQ 232 Query: 386 NRLNAK 391 RL + Sbjct: 233 VRLERR 238 >gi|254507308|ref|ZP_05119444.1| amino acid ABC transproter, permease protein [Vibrio parahaemolyticus 16] gi|219549768|gb|EED26757.1| amino acid ABC transproter, permease protein [Vibrio parahaemolyticus 16] Length = 223 Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 55/170 (32%), Positives = 97/170 (57%), Gaps = 15/170 (8%) Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALK 241 TM+ +FS +L ++L+ R F L LYIS F G P LV + L Sbjct: 22 TMEMAVWGLIFSLILSVILANI-----RVFKVPVLDQLSQLYISFFR--GTPLLVQLFL- 73 Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301 L++ P + F ++ G F + I L+ + AA++AE +R+ +I + R QMEA++ Sbjct: 74 --LYYGLPQI--FPWMVGLDA---FSAAVIGLTLHFAAYMAESIRAAIIGIDRSQMEASL 126 Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 ++G+T +A R V+LPQA R +P L + +++++K++SLA +G A++++ Sbjct: 127 SVGMTTTQAMRRVILPQATRVALPSLMNYFIDMIKSTSLAFTLGVAEIMA 176 >gi|171741042|ref|ZP_02916849.1| hypothetical protein BIFDEN_00108 [Bifidobacterium dentium ATCC 27678] gi|171276656|gb|EDT44317.1| hypothetical protein BIFDEN_00108 [Bifidobacterium dentium ATCC 27678] Length = 235 Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 48/138 (34%), Positives = 79/138 (57%), Gaps = 1/138 (0%) Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312 +F + +V F + ++ L AA++AEIVR+GL AV GQ EAA ALG+ R Sbjct: 52 EFWSVDSQSVITAFNAAWLGLVLNEAAYLAEIVRAGLEAVDPGQTEAAKALGMKRSLIMR 111 Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA-DLVSVGGTIINQTGQAIEIILIWM 371 ++LPQAMR IIPP ++++ +LK +SL AV F +L I + + I ++++ Sbjct: 112 RIVLPQAMRIIIPPTGNEFIGMLKTTSLVNAVPFTLELQFATTAIATRLYKPIPLLIVAC 171 Query: 372 FIYLSLSIMIALFMNRLN 389 YL ++ ++ + +RL Sbjct: 172 IWYLVITSILMIIQSRLE 189 >gi|163745577|ref|ZP_02152937.1| amino acid ABC transporter, permease protein [Oceanibulbus indolifex HEL-45] gi|161382395|gb|EDQ06804.1| amino acid ABC transporter, permease protein [Oceanibulbus indolifex HEL-45] Length = 432 Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 51/158 (32%), Positives = 90/158 (56%), Gaps = 11/158 (6%) Query: 204 ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVS 263 A L R H K + +++I + G+P + L+ F V+ + F GS V Sbjct: 245 ALALGRQSHLPIVKGICVVFIE--FVRGVPLITLL-------FVANVMLAYFFPPGSGVD 295 Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 F+ + I ++ +++A+IAE++R GL A+P+GQ EAA +LGL + +A RL++LPQAM+ Sbjct: 296 -LFIRVVIMITMFSSAYIAEVIRGGLAALPKGQYEAADSLGLDYAQAMRLIILPQAMKIS 354 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVS-VGGTIINQT 360 IP + + + L K+++L + D++ + G I+ T Sbjct: 355 IPGIVNIAVGLFKDTTLVSVISLFDIIGMIRGPILAST 392 >gi|254248453|ref|ZP_04941773.1| hypothetical protein BCPG_03284 [Burkholderia cenocepacia PC184] gi|124874954|gb|EAY64944.1| hypothetical protein BCPG_03284 [Burkholderia cenocepacia PC184] Length = 235 Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 79/246 (32%), Positives = 123/246 (50%), Gaps = 34/246 (13%) Query: 165 LPFG------MFLNNRGLSFPTL------TMDTNAKIFVFSFVLGIVLSLFATRLSRHFH 212 +PFG MF N P L T++ A FV S VLG++L+L ++SR+ Sbjct: 1 MPFGRRIGDLMFFQNAIDFLPILLKGAVVTIEITACAFVLSSVLGLILALM--KVSRNRA 58 Query: 213 EKTGKALPLLYISTFL--IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY 270 T ST + I GLP +V + + ++F P LG + S + L Sbjct: 59 VATAG-------STIVNVIRGLPIIVQL---FYMYFVLPDLG----VQLSAFQAGVLGLG 104 Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IA S Y A E R+G+ A+ RGQ+EAA A+G+ R V+LPQA R +PP + Sbjct: 105 IAYSAYQA----ENFRAGIEAIDRGQIEAAHAIGMRGPMIMRRVVLPQAFRIALPPYGNT 160 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 + LLK+SS+A + A++ G I + T Q + + + +YL+L + + +NRL Sbjct: 161 LVMLLKDSSVASTITVAEITRAGQLIASSTFQNMSVYTLVALLYLALGLPLMFAVNRLGK 220 Query: 391 KIALKE 396 ++AL+ Sbjct: 221 RLALRR 226 >gi|84515669|ref|ZP_01003030.1| ABC glutamate/glutamine/aspartate/asparagine transporter, inner membrane subunit BztC [Loktanella vestfoldensis SKA53] gi|84510111|gb|EAQ06567.1| ABC glutamate/glutamine/aspartate/asparagine transporter, inner membrane subunit BztC [Loktanella vestfoldensis SKA53] Length = 497 Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 44/124 (35%), Positives = 71/124 (57%), Gaps = 15/124 (12%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I ++ + +A++AE+VR GL A+P+GQ EAA +LGL + K+ RL++LPQA++ IP + + Sbjct: 368 IMVTLFASAYLAEVVRGGLAALPKGQYEAADSLGLDYWKSMRLIILPQALKISIPGIVNT 427 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI-------MIAL 383 ++ L K+++L V +G D + + AI W IY L I M Sbjct: 428 FIGLFKDTTLVVFIGLRDPLGL--------TNAIRATSEWNGIYWELYIFVGGLFFMFCF 479 Query: 384 FMNR 387 FM+R Sbjct: 480 FMSR 483 Score = 39.7 bits (91), Expect = 0.83, Method: Compositional matrix adjust. Identities = 20/70 (28%), Positives = 39/70 (55%), Gaps = 5/70 (7%) Query: 77 VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136 +PYT+ ++ +L + T SG++ + +G + GR S+ L+ W+C ++EV Sbjct: 280 LPYTASENFGGFMLAIIIGT-----SGIVLSLPLGIALALGRQSSMPLIKWVCVSFIEVI 334 Query: 137 RNIPPLVVIF 146 R +P +V +F Sbjct: 335 RGVPLIVWLF 344 >gi|319937507|ref|ZP_08011912.1| hypothetical protein HMPREF9488_02748 [Coprobacillus sp. 29_1] gi|319807347|gb|EFW03956.1| hypothetical protein HMPREF9488_02748 [Coprobacillus sp. 29_1] Length = 226 Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 40/131 (30%), Positives = 77/131 (58%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+ IALS + A+ E++RSG+ V +GQ EA +G+ + + R V+LPQA + I+P Sbjct: 96 FICGLIALSINSGAYSTELIRSGIQGVDKGQWEACETIGMNYIQTMRHVILPQAFKRIVP 155 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 P+ S+++ L+K+SSL +G ++L+ + + ++ +YL++++ ++ F Sbjct: 156 PIVSEFITLIKDSSLISCIGVSELLLRTQVMGANYSNYLVPLVTAGCMYLAMTLTVSYFA 215 Query: 386 NRLNAKIALKE 396 RL K+A + Sbjct: 216 RRLERKLAASD 226 Score = 37.0 bits (84), Expect = 5.2, Method: Compositional matrix adjust. Identities = 20/44 (45%), Positives = 27/44 (61%) Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSV 152 I+GTL A +LS K++ + VYVEV R P L+ I F Y +V Sbjct: 36 ILGTLGAAAKLSKYKILRILGNVYVEVIRGTPMLLQILFFYLAV 79 >gi|242240068|ref|YP_002988249.1| polar amino acid ABC transporter inner membrane subunit [Dickeya dadantii Ech703] gi|242132125|gb|ACS86427.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya dadantii Ech703] Length = 239 Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 64/200 (32%), Positives = 105/200 (52%), Gaps = 19/200 (9%) Query: 189 IFVFSFVLGIVLS--LFATRLSRHFHEKTGKALPLLYISTFLIF-GLPTLVLIALKYQLH 245 +F SF +G VLS L A R+S + + L LIF G P L+ + L Y Sbjct: 24 LFFASFAIGAVLSILLVAMRVSAN------RPLRGFARGYMLIFRGTPLLIQLFLLYY-- 75 Query: 246 FDKPVLGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301 LGQF+ + S + P F ++L+ TA + AEI+R L+A+P GQ+EA + Sbjct: 76 ----GLGQFSMVRNSVLWPLLREPFTCAVLSLALCTAGYTAEILRGALLAIPVGQIEAGL 131 Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361 A G++ R ++ P A+R +P +++ + L+K+++LA V D+ V II +T Sbjct: 132 ACGMSRWLLLRRIIAPVALRYALPAWSTEAILLIKSTALASLVTVWDVTGVAQQIIQRTY 191 Query: 362 QAIEIILIWMFIYLSLSIMI 381 + +E+ + IYL L+ +I Sbjct: 192 RTMEVFVCAALIYLLLNFII 211 >gi|330873113|gb|EGH07262.1| amino acid ABC transporter permease [Pseudomonas syringae pv. morsprunorum str. M302280PT] gi|330963201|gb|EGH63461.1| amino acid ABC transporter permease [Pseudomonas syringae pv. actinidiae str. M302091] Length = 365 Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 34/81 (41%), Positives = 59/81 (72%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I + + +A+IAE+VR G+ A+P+GQ EAA A+GL + +A LV+LPQA++ +IP + + Sbjct: 235 IGVILFQSAYIAEVVRGGMQAIPKGQYEAASAMGLGYWRAMGLVILPQALKMVIPGIVNT 294 Query: 331 YLNLLKNSSLAVAVGFADLVS 351 ++ L K++SL + +G DL++ Sbjct: 295 FIALFKDTSLVIIIGLFDLLN 315 >gi|328471236|gb|EGF42138.1| amino acid ABC transporter permease [Vibrio parahaemolyticus 10329] Length = 223 Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 57/171 (33%), Positives = 94/171 (54%), Gaps = 17/171 (9%) Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV-LIAL 240 TM+ VFS +L ++L+ R F L LYIS F G P LV L L Sbjct: 22 TMEMATWGLVFSLILAVILANI-----RVFKLPVLDQLSQLYISFFR--GTPLLVQLFLL 74 Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300 Y L PV+ + F + I L+ + AA++AE +R+ +I + R QMEA+ Sbjct: 75 YYGLPQIFPVMVGID---------AFSAAVIGLTLHFAAYMAESIRAAIIGIDRSQMEAS 125 Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 +++G+T +A R V+LPQA R +P L + +++++K++SLA +G A++++ Sbjct: 126 LSVGMTTPQAMRRVILPQATRVALPSLMNYFIDMIKSTSLAFTLGVAEIMA 176 >gi|327472311|gb|EGF17742.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK408] Length = 521 Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 40/106 (37%), Positives = 65/106 (61%) Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 +S T A+++EIVR G+ AV +GQ EAA ALG+TH + R ++LPQ +R+I+P ++++ Sbjct: 383 VSINTGAYMSEIVRGGIFAVDKGQFEAATALGMTHGQTMRKIVLPQVVRNILPATGNEFV 442 Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378 +K++S+ + +L G TI QT Q + I IY L+ Sbjct: 443 INIKDTSVLNVISVVELYFSGNTIATQTYQYFQTFTIIAVIYFVLT 488 Score = 37.7 bits (86), Expect = 3.5, Method: Compositional matrix adjust. Identities = 28/88 (31%), Positives = 40/88 (45%), Gaps = 11/88 (12%) Query: 96 TFWLAFSGMIPATIIGTLVGAGRL---SANKLVA-------WICRVYVEVFRNIPPLVVI 145 T ++ +G I IIG L+G R S NKL+A W VY+E+FR P +V Sbjct: 299 TLLISITGTIAGLIIGLLIGVYRTAPASKNKLLASLQKIFGWFLNVYIEIFRGTPMIVQS 358 Query: 146 FFLYKSVLSVLPIP-DHSIVLPFGMFLN 172 +Y I D +I F + +N Sbjct: 359 MVIYYGTAQAFGISIDRTIAAIFIVSIN 386 >gi|298487227|ref|ZP_07005276.1| glutamine transport system permease protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298158251|gb|EFH99322.1| glutamine transport system permease protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|320324044|gb|EFW80127.1| amino acid ABC transporter permease [Pseudomonas syringae pv. glycinea str. B076] gi|330890818|gb|EGH23479.1| amino acid ABC transporter permease [Pseudomonas syringae pv. mori str. 301020] gi|330985342|gb|EGH83445.1| amino acid ABC transporter permease [Pseudomonas syringae pv. lachrymans str. M301315] Length = 220 Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 47/164 (28%), Positives = 89/164 (54%), Gaps = 11/164 (6%) Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292 P LVLI L Y F P LG + S + LS Y A++ E+ R+GL+++ Sbjct: 68 PILVLILLIY---FALPGLG--------IRLDKLASFIVTLSLYAGAYLTEVFRAGLLSI 116 Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352 +GQ EA +A+GL + +++P +R+++P L++ +++L K++SLA A+ +L Sbjct: 117 HKGQREAGLAIGLGEWQVRAYIIVPVMLRNVLPALSNNFISLFKDTSLAAAIAVPELTYY 176 Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 I ++ + IE L+ +Y+ +IA+ + L ++A++ Sbjct: 177 ARKINVESYRVIETWLVTTALYVVACYVIAMLLRTLEQRLAIRR 220 >gi|229815591|ref|ZP_04445918.1| hypothetical protein COLINT_02642 [Collinsella intestinalis DSM 13280] gi|229808821|gb|EEP44596.1| hypothetical protein COLINT_02642 [Collinsella intestinalis DSM 13280] Length = 463 Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 42/126 (33%), Positives = 77/126 (61%), Gaps = 3/126 (2%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I ++ +AA++ EI R+G+ ++P+GQ EAA +LG++ + +++PQ R++IP LTS+ Sbjct: 309 IVMAMNSAAYLCEIFRAGIQSIPKGQSEAARSLGMSAAQTMVSIIIPQTFRNVIPTLTSE 368 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII---LIWMFIYLSLSIMIALFMNR 387 ++ L K++SL AVG ++V TI+ TG + L ++ + L L+ +++L R Sbjct: 369 FILLYKDTSLLAAVGVMEIVMYAKTIVATTGSITPYVVAALFYLVVTLPLARVVSLLELR 428 Query: 388 LNAKIA 393 L A Sbjct: 429 LTGATA 434 >gi|194290844|ref|YP_002006751.1| binding-protein-dependent transporter inner membrane component [Cupriavidus taiwanensis LMG 19424] gi|193224679|emb|CAQ70690.1| putative Binding-protein-dependent transporter, inner membrane component [Cupriavidus taiwanensis LMG 19424] Length = 217 Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 39/134 (29%), Positives = 78/134 (58%), Gaps = 1/134 (0%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P+F + +A + AA+ AEI R+G+ +V RGQ EA+ ALG+T+ + R V+LPQ + + Sbjct: 85 PDFPAAVVAFALNYAAYFAEIFRAGIKSVDRGQYEASKALGMTYFQTMRRVVLPQMVSRV 144 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 +PP++++ + L+K++SL + D++ I+ + ++ +F YL +++++ Sbjct: 145 LPPVSNETITLIKDTSLIYVLALNDILRTARGIVQRDFTTTPFLVAALF-YLVMTLILTW 203 Query: 384 FMNRLNAKIALKEK 397 F L + A + Sbjct: 204 FFQNLEKRYAKHDD 217 >gi|161620737|ref|YP_001594623.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Brucella canis ATCC 23365] gi|254703029|ref|ZP_05164857.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Brucella suis bv. 3 str. 686] gi|260568042|ref|ZP_05838511.1| cystine transport system permease [Brucella suis bv. 4 str. 40] gi|161337548|gb|ABX63852.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Brucella canis ATCC 23365] gi|260154707|gb|EEW89788.1| cystine transport system permease [Brucella suis bv. 4 str. 40] Length = 226 Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 40/126 (31%), Positives = 78/126 (61%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + I+ + A+ +EI+R+ + +VP+GQ EAA ++G++ R+A +LPQA R+ +P Sbjct: 89 FPAALISFTLNIGAYSSEIIRAVISSVPKGQWEAAYSIGMSWRQALIRTILPQATRTAVP 148 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PL++ +++L+K++SLA A+ +L I+ T + + + + IYL+LS +++ Sbjct: 149 PLSNTFISLIKDTSLAAAITVPELFQSAQRIVATTYEPLILYIEAALIYLALSSILSALQ 208 Query: 386 NRLNAK 391 RL + Sbjct: 209 VRLERR 214 >gi|77457202|ref|YP_346707.1| amino acid ABC transporter permease [Pseudomonas fluorescens Pf0-1] gi|77381205|gb|ABA72718.1| amino acid ABC transporter membrane protein 2, PAAT family [Pseudomonas fluorescens Pf0-1] Length = 365 Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 34/81 (41%), Positives = 59/81 (72%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I + + +A++AE+VR GL A+P+GQ EAA A+GL + +A LV+LPQA++ +IP + + Sbjct: 235 IGVILFQSAYVAEVVRGGLQAIPKGQYEAAAAMGLGYWRAMGLVILPQALKLVIPGIVNT 294 Query: 331 YLNLLKNSSLAVAVGFADLVS 351 ++ L K++SL + +G DL++ Sbjct: 295 FIALFKDTSLVIIIGLFDLLN 315 >gi|323350416|ref|ZP_08086079.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis VMC66] gi|322123353|gb|EFX95031.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis VMC66] Length = 521 Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 40/106 (37%), Positives = 65/106 (61%) Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 +S T A+++EIVR G+ AV +GQ EAA ALG+TH + R ++LPQ +R+I+P ++++ Sbjct: 383 VSINTGAYMSEIVRGGIFAVDKGQFEAATALGMTHGQTMRKIVLPQVVRNILPATGNEFV 442 Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378 +K++S+ + +L G TI QT Q + I IY L+ Sbjct: 443 INIKDTSVLNVISVVELYFSGNTIATQTYQYFQTFTIIAVIYFVLT 488 Score = 37.7 bits (86), Expect = 3.5, Method: Compositional matrix adjust. Identities = 28/88 (31%), Positives = 40/88 (45%), Gaps = 11/88 (12%) Query: 96 TFWLAFSGMIPATIIGTLVGAGRL---SANKLVA-------WICRVYVEVFRNIPPLVVI 145 T ++ +G I IIG L+G R S NKL+A W VY+E+FR P +V Sbjct: 299 TLLISITGTIAGLIIGLLIGVYRTAPASKNKLLASLQKIFGWFLNVYIEIFRGTPMIVQS 358 Query: 146 FFLYKSVLSVLPIP-DHSIVLPFGMFLN 172 +Y I D +I F + +N Sbjct: 359 MVIYYGTAQAFGISIDRTIAAIFIVSIN 386 >gi|291279628|ref|YP_003496463.1| polar amino acid ABC transporter permease [Deferribacter desulfuricans SSM1] gi|290754330|dbj|BAI80707.1| polar amino acid ABC transporter, permease [Deferribacter desulfuricans SSM1] Length = 291 Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 40/125 (32%), Positives = 77/125 (61%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +ALS Y +A+I+EIV+ ++A+ + Q+++A +LG+ + + ++LPQAM IIPPLT Q Sbjct: 167 LALSLYESAYISEIVKGAILAIKKEQIDSAKSLGMNKWQRLKYIILPQAMPLIIPPLTGQ 226 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++ +K+S++ + +L G ++ T EI +I IYL ++ +++ F + L Sbjct: 227 MVSTIKDSAILSVISIPELTFQGMELMASTYLIFEIWIIITVIYLLINTILSHFSSFLEK 286 Query: 391 KIALK 395 ++ K Sbjct: 287 RMTTK 291 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 30/79 (37%), Positives = 41/79 (51%), Gaps = 8/79 (10%) Query: 71 EIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICR 130 E D IVP I++G +NT ++ +I +TIIG + G + S N I Sbjct: 51 EKDGKIVP--------NVIMIGVINTLKISIYSIILSTIIGFIFGIMKASKNTFFRLISI 102 Query: 131 VYVEVFRNIPPLVVIFFLY 149 YVE RNIP +VVIF +Y Sbjct: 103 SYVESIRNIPSIVVIFVVY 121 >gi|222823907|ref|YP_002575481.1| amino acid ABC transporter permease, His/Glu/Gln/Arg/opine family [Campylobacter lari RM2100] gi|222539129|gb|ACM64230.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Campylobacter lari RM2100] Length = 260 Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 53/163 (32%), Positives = 89/163 (54%), Gaps = 13/163 (7%) Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFN-FIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286 L+ G P LV I L Y + D LG N ++ G + L+ + +A+I EI R Sbjct: 106 LVRGTPLLVQILLIYYIFADN--LGLDNRYVCGVLI----------LALFASAYICEIFR 153 Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346 +G+++V + Q E+A ALGL+ + + V+ PQA+++I+ PL+ Q NL+K+SSL + Sbjct: 154 AGILSVDKMQYESAKALGLSEFEIYKSVIFPQALKNILAPLSGQLSNLIKDSSLLSVIAI 213 Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 ++L I T +EI + YL L++ I++F +L Sbjct: 214 SELTQNAQEINAFTFSTLEIYIPLALCYLVLTLPISMFSRKLE 256 >gi|111017823|ref|YP_700795.1| ABC amino acid transporter, permease component [Rhodococcus jostii RHA1] gi|110817353|gb|ABG92637.1| ABC amino acid transporter, permease component [Rhodococcus jostii RHA1] Length = 311 Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 39/116 (33%), Positives = 71/116 (61%) Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 AA++AEI+R G+ +V GQ +AA ALG+ + R V+LPQAMR ++PP +Q +++LK Sbjct: 176 AAYMAEIIRGGIGSVDNGQYDAAQALGMNKTQLMRRVILPQAMRVVLPPTGNQVISMLKG 235 Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393 ++L + +DL+ I + Q I ++++ YL ++ +++ F ++L A Sbjct: 236 TTLVSVLAISDLLYSAQIIYSLNYQTIPLLIVASLWYLLMTTILSFFQDKLEKHYA 291 Score = 42.4 bits (98), Expect = 0.13, Method: Compositional matrix adjust. Identities = 37/92 (40%), Positives = 46/92 (50%), Gaps = 5/92 (5%) Query: 79 YTSDSSY--ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136 +T SSY A IL G V T L M +GTL+ RLS N +V I R Y+ F Sbjct: 60 WTVVSSYLFAPEILRGVVLTIILTIVSMTAGISLGTLLAVMRLSDNPIVNSISRGYIWFF 119 Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFG 168 R P LV + F Y ++ L P SI +PFG Sbjct: 120 RGTPLLVQLIFWYN--IAAL-YPTISIGIPFG 148 >gi|17988945|ref|NP_541578.1| cystine transport system permease protein [Brucella melitensis bv. 1 str. 16M] gi|17984778|gb|AAL53842.1| cystine transport system permease protein [Brucella melitensis bv. 1 str. 16M] Length = 244 Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 40/126 (31%), Positives = 77/126 (61%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + I + A+ +EI+R+ + +VP+GQ EAA ++G++ R+A +LPQA R+ +P Sbjct: 107 FPAALIGFTLNIGAYSSEIIRAVISSVPKGQWEAAYSIGMSWRQALIRTILPQATRTAVP 166 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PL++ +++L+K++SLA A+ +L I+ T + + + + IYL+LS +++ Sbjct: 167 PLSNTFISLIKDTSLAAAITVPELFQSAQRIVATTYEPLILYIEAALIYLALSSILSALQ 226 Query: 386 NRLNAK 391 RL + Sbjct: 227 VRLERR 232 >gi|26988034|ref|NP_743459.1| polar amino acid ABC transporter inner membrane subunit [Pseudomonas putida KT2440] gi|24982754|gb|AAN66923.1|AE016320_11 general amino acid ABC transporter, permease protein [Pseudomonas putida KT2440] gi|313500472|gb|ADR61838.1| AapM [Pseudomonas putida BIRD-1] Length = 365 Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 38/94 (40%), Positives = 63/94 (67%), Gaps = 6/94 (6%) Query: 264 PEFMSL------YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317 PE MS I + + +A+IAE+VR GL A+P+GQ EAA A+GL + ++ LV+LP Sbjct: 222 PEGMSFDKLLRAMIGVILFQSAYIAEVVRGGLQAIPKGQYEAAAAMGLGYWRSMGLVILP 281 Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 QA++ +IP + + ++ L K++SL + +G DL++ Sbjct: 282 QALKLVIPGIVNTFIALFKDTSLVIIIGLFDLLN 315 >gi|327191793|gb|EGE58795.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium etli CNPAF512] Length = 226 Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 59/206 (28%), Positives = 111/206 (53%), Gaps = 20/206 (9%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF---GLPTLVLIALKYQLHFD 247 + SF G++L L T ++R F G A P++ ++ F ++ G P LV + + + + Sbjct: 28 LLSFTFGLILGL-VTAIARLF----GPA-PVVVVARFYVWVIRGTPLLVQL---FVIFYG 78 Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307 P +G + F + I + A+ +EI+R+ + +VP+GQ EAA ++G++ Sbjct: 79 LPSIG--------ILLDAFPAALIGFTLNIGAYSSEIIRAVISSVPKGQWEAAYSIGMSW 130 Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367 R+A +LPQA R +PPL++ +++L+K++SLA A+ +L I+ T + + + Sbjct: 131 RQAMSRTILPQAGRVAVPPLSNTFISLVKDTSLAAAITVPELFQAAQRIVATTYEPLILY 190 Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIA 393 + IYL LS +++ RL + A Sbjct: 191 IEAALIYLVLSSILSQLQVRLERRFA 216 >gi|331267034|ref|YP_004326664.1| ABC transporter-amino acid transport; amino acid-binding protein/permease protein [Streptococcus oralis Uo5] gi|326683706|emb|CBZ01324.1| ABC transporter-amino acid transport; amino acid-binding protein/permease protein [Streptococcus oralis Uo5] Length = 522 Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 39/109 (35%), Positives = 66/109 (60%) Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 +S T A++ EIVR G++AV +GQ EAA ALG+TH + R ++LPQ +R+I+P ++++ Sbjct: 384 VSINTGAYMTEIVRGGILAVDKGQFEAATALGMTHNQTMRKIVLPQVVRNILPATGNEFV 443 Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 +K++S+ + +L G T+ QT Q + I IY L+ + Sbjct: 444 INIKDTSVLNVISVVELYFSGNTVATQTYQYFQTFTIIAVIYFVLTFTV 492 Score = 36.2 bits (82), Expect = 9.5, Method: Compositional matrix adjust. Identities = 24/64 (37%), Positives = 31/64 (48%), Gaps = 10/64 (15%) Query: 96 TFWLAFSGMIPATIIGTLVGAGR---LSANK-------LVAWICRVYVEVFRNIPPLVVI 145 T ++ G I IIG +G R LS NK LV WI VY+E+FR P +V Sbjct: 300 TLLISIIGTIVGLIIGLAIGVFRTAPLSENKAIYGLQKLVGWILNVYIEIFRGTPMIVQS 359 Query: 146 FFLY 149 +Y Sbjct: 360 MVIY 363 >gi|323698008|ref|ZP_08109920.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio sp. ND132] gi|323457940|gb|EGB13805.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio desulfuricans ND132] Length = 237 Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 49/146 (33%), Positives = 84/146 (57%), Gaps = 6/146 (4%) Query: 259 GSTVSPE-FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317 G +P+ ++ +AL + A+ AEI+R+G+ ++ +GQMEAA + GL+H +A V+LP Sbjct: 85 GDGFTPDPLITGIVALGINSGAYNAEIIRAGIQSINKGQMEAARSTGLSHTQAMFHVILP 144 Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377 QA++ +IPPL ++ + LLK+SSL +G A+L+ + + + ++ IYL L Sbjct: 145 QALKRMIPPLGNELIVLLKDSSLISTIGVAELMFTAKVLGARYYTYVPFLVGVGCIYLVL 204 Query: 378 SIMIALFMNRLNAKI-----ALKEKK 398 + + N L K+ A EKK Sbjct: 205 TFGFSRLFNALERKLSAGSGARTEKK 230 Score = 38.1 bits (87), Expect = 2.7, Method: Compositional matrix adjust. Identities = 19/54 (35%), Positives = 27/54 (50%) Query: 96 TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 T + F + +G L G GR+S + I VY++V R P L+ IFF Y Sbjct: 20 TLQVTFGALALGLFLGILAGTGRISRRVQIRVIADVYIQVIRGTPMLLQIFFFY 73 >gi|311106716|ref|YP_003979569.1| amino ABC transporter permease, 3-TM region, His/Glu/Gln/Arg/opine family domain-containing protein 10 [Achromobacter xylosoxidans A8] gi|310761405|gb|ADP16854.1| amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family domain protein 10 [Achromobacter xylosoxidans A8] Length = 229 Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 46/128 (35%), Positives = 76/128 (59%), Gaps = 10/128 (7%) Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290 G+P L+LI Y F P L G +S F +L AL Y +A+++E++RSG+ Sbjct: 70 GMPLLMLIFWAY---FVVPKLT------GQVIS-GFWTLIFALVVYESAYLSEVIRSGIE 119 Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 AVPRGQ+EA+ +LG+ + R V+LPQA+ +++P +TSQ+++ +K +SL + +L Sbjct: 120 AVPRGQIEASRSLGVGYWTTMRRVVLPQALFNVLPSMTSQFVSTIKETSLGYVISVNELT 179 Query: 351 SVGGTIIN 358 + N Sbjct: 180 FAANQVNN 187 >gi|306825868|ref|ZP_07459207.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sp. oral taxon 071 str. 73H25AP] gi|304432229|gb|EFM35206.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sp. oral taxon 071 str. 73H25AP] Length = 522 Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 39/109 (35%), Positives = 66/109 (60%) Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 +S T A++ EIVR G++AV +GQ EAA ALG+TH + R ++LPQ +R+I+P ++++ Sbjct: 384 VSINTGAYMTEIVRGGILAVDKGQFEAATALGMTHNQTMRKIVLPQVVRNILPATGNEFV 443 Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 +K++S+ + +L G T+ QT Q + I IY L+ + Sbjct: 444 INIKDTSVLNVISVVELYFSGNTVATQTYQYFQTFTIIAVIYFVLTFTV 492 Score = 36.2 bits (82), Expect = 8.8, Method: Compositional matrix adjust. Identities = 24/64 (37%), Positives = 31/64 (48%), Gaps = 10/64 (15%) Query: 96 TFWLAFSGMIPATIIGTLVGAGR---LSANK-------LVAWICRVYVEVFRNIPPLVVI 145 T ++ G I IIG +G R LS NK LV WI VY+E+FR P +V Sbjct: 300 TLLISIIGTIVGLIIGLAIGVFRTAPLSENKAIYGLQKLVGWILNVYIEIFRGTPMIVQS 359 Query: 146 FFLY 149 +Y Sbjct: 360 MVIY 363 >gi|288904530|ref|YP_003429751.1| ABC transporter amino acid-binding protein/amino acid ABC transporter permease protein [Streptococcus gallolyticus UCN34] gi|306830524|ref|ZP_07463692.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|325977501|ref|YP_004287217.1| inner membrane amino-acid ABC transporter permease yecS [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] gi|288731255|emb|CBI12805.1| putative ABC transporter amino acid-binding protein/amino acid ABC transporter permease protein [Streptococcus gallolyticus UCN34] gi|304427318|gb|EFM30422.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|325177429|emb|CBZ47473.1| Inner membrane amino-acid ABC transporter permease protein yecS [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] Length = 523 Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 39/109 (35%), Positives = 65/109 (59%) Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 +S T A+++EIVR G+ AV +GQ EAA ALG TH + R ++LPQ +R+I+P ++++ Sbjct: 386 VSINTGAYMSEIVRGGIFAVDKGQFEAATALGFTHGQTMRKIVLPQVVRNILPATGNEFV 445 Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 +K++S+ + +L G T+ QT Q + I IY L+ + Sbjct: 446 INIKDTSVLNVISVVELYFSGNTVATQTYQYFQTFTIIAIIYFVLTFTV 494 >gi|209528046|ref|ZP_03276526.1| polar amino acid ABC transporter, inner membrane subunit [Arthrospira maxima CS-328] gi|209491532|gb|EDZ91907.1| polar amino acid ABC transporter, inner membrane subunit [Arthrospira maxima CS-328] Length = 405 Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 41/113 (36%), Positives = 70/113 (61%), Gaps = 8/113 (7%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + L+ +++A++AE VR GL A+PRGQ EAA ALGL L++LPQA++ IP + Q Sbjct: 276 VGLTMFSSAYLAENVRGGLQAIPRGQYEAAKALGLNPALTMVLIILPQALKISIPSIVGQ 335 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQT---GQAIEI-----ILIWMFIYL 375 +++L ++++L VG +L+ + +I+ G+ E+ +L W+F YL Sbjct: 336 FISLFQDTTLLAIVGLVELLGISRSILANPQFLGRYAEVYLFLGVLYWLFCYL 388 >gi|118444293|ref|YP_878646.1| amino acid ABC transporter, permease component [Clostridium novyi NT] gi|118134749|gb|ABK61793.1| amino acid ABC transporter, permease component [Clostridium novyi NT] Length = 215 Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 43/128 (33%), Positives = 77/128 (60%), Gaps = 7/128 (5%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I LS + A+++EI+R G+I++ +GQ EA ALG T+ + V+LPQA R I+P + ++ Sbjct: 91 IGLSLNSGAYMSEIIRGGIISIDKGQFEACKALGFTNIQTMTKVILPQAFRVILPSVGNE 150 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++ +LK++SL A+ +L+ ++ TG+ +E L+ +YL +M +F N Sbjct: 151 FITMLKDTSLVSAITMEELMRNAQLQMSSTGRPVEPFLMAGLLYL---LMTTVF----NI 203 Query: 391 KIALKEKK 398 +L EK+ Sbjct: 204 IFSLTEKR 211 Score = 37.4 bits (85), Expect = 4.3, Method: Compositional matrix adjust. Identities = 22/67 (32%), Positives = 34/67 (50%) Query: 83 SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142 S+ +L G V T L +I + IG +V +LS NK++ +I Y +FR P Sbjct: 7 SNMLPVLLKGSVITIELTVISVILGSFIGVIVAGLKLSNNKIIVYIISFYTWIFRGTPMF 66 Query: 143 VVIFFLY 149 + +FF Y Sbjct: 67 LQLFFFY 73 >gi|120609705|ref|YP_969383.1| polar amino acid ABC transporter inner membrane subunit [Acidovorax citrulli AAC00-1] gi|120588169|gb|ABM31609.1| amino acid ABC transporter membrane protein, PAAT family [Acidovorax citrulli AAC00-1] Length = 217 Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 40/133 (30%), Positives = 77/133 (57%), Gaps = 1/133 (0%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P+F + +A + AA+ AEI R+G+ ++ RGQ EAA LG+T+ + R ++LPQ +R I Sbjct: 85 PDFPAAVVAFALNYAAYFAEIFRAGIQSIDRGQYEAAKVLGMTYGQTMRRIVLPQMVRRI 144 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 +PP++++ + L+K++SL + DL+ I+ + ++ F YL +++++ Sbjct: 145 LPPMSNETITLVKDTSLIYVLALNDLLRAARGIVQRDFTTTPFLVAAAF-YLVMTLVLTW 203 Query: 384 FMNRLNAKIALKE 396 RL + A + Sbjct: 204 GFQRLERRYARHD 216 >gi|28868468|ref|NP_791087.1| amino acid ABC transporter permease [Pseudomonas syringae pv. tomato str. DC3000] gi|213967084|ref|ZP_03395233.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tomato T1] gi|301386370|ref|ZP_07234788.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tomato Max13] gi|302062366|ref|ZP_07253907.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tomato K40] gi|302133058|ref|ZP_07259048.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tomato NCPPB 1108] gi|28851706|gb|AAO54782.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tomato str. DC3000] gi|213927926|gb|EEB61472.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tomato T1] gi|331015250|gb|EGH95306.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 365 Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 34/81 (41%), Positives = 59/81 (72%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I + + +A+IAE+VR G+ A+P+GQ EAA A+GL + +A LV+LPQA++ +IP + + Sbjct: 235 IGVILFQSAYIAEVVRGGMQAIPKGQYEAASAMGLGYWRAMGLVILPQALKMVIPGIVNT 294 Query: 331 YLNLLKNSSLAVAVGFADLVS 351 ++ L K++SL + +G DL++ Sbjct: 295 FIALFKDTSLVIIIGLFDLLN 315 >gi|16264848|ref|NP_437640.1| putative amino acid uptake ABC transporter permease protein [Sinorhizobium meliloti 1021] gi|15140987|emb|CAC49500.1| putative amino acid uptake ABC transporter permease protein [Sinorhizobium meliloti 1021] Length = 549 Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 55/150 (36%), Positives = 84/150 (56%), Gaps = 15/150 (10%) Query: 195 VLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL---IFGLPTLVLIALKYQLHFDKPVL 251 VL I+L L + H + PL S F+ I G+P LV++ L+ P+ Sbjct: 354 VLAIILGLLT--FGGYLHRRH----PLAIGSEFVVDTIRGIPMLVIV-----LYVGLPLS 402 Query: 252 GQF-NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 G + G P M +A++ +A++AEI RSG+ A+P GQ+EAA ++GL + Sbjct: 403 GALKDATQGVLDPPNLMRGIVAMALAYSAYLAEIFRSGINAIPIGQIEAARSIGLNRWQT 462 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340 RLV+LPQA R IIPPL ++ + +LK++SL Sbjct: 463 ARLVVLPQAFRIIIPPLGNELIAILKDTSL 492 >gi|298294199|ref|YP_003696138.1| polar amino acid ABC transporter inner membrane subunit [Starkeya novella DSM 506] gi|296930710|gb|ADH91519.1| polar amino acid ABC transporter, inner membrane subunit [Starkeya novella DSM 506] Length = 214 Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 61/200 (30%), Positives = 97/200 (48%), Gaps = 14/200 (7%) Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252 +F G V+SL L F G+ + L Y+ F G P L+ + L Y F ++G Sbjct: 27 AFAGGAVVSLILLSLRLAFPRVAGRPVHL-YVQVFQ--GTPLLMQLFLVY---FGLALMG 80 Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312 + ++ + LS Y++A++ E ++AVP+GQ EA+ +LGL H + Sbjct: 81 --------IQTTPLLAASLCLSVYSSAYLTETWYGCVLAVPKGQWEASSSLGLPHWQQML 132 Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372 L++LPQA+R +PP + ++KN+SLA VGF +L I N T + F Sbjct: 133 LIILPQALRLSVPPTVGLMVQIVKNTSLASIVGFVELTRASQIIANATFEPFLAYGAVAF 192 Query: 373 IYLSLSIMIALFMNRLNAKI 392 IY + I+L L +I Sbjct: 193 IYFVICFSISLCGRHLEKRI 212 >gi|262368885|ref|ZP_06062214.1| ABC glutamate/aspartate transporter [Acinetobacter johnsonii SH046] gi|262316563|gb|EEY97601.1| ABC glutamate/aspartate transporter [Acinetobacter johnsonii SH046] Length = 227 Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 40/134 (29%), Positives = 76/134 (56%) Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320 T+ +S +A + AA+ +EIVR+G+ ++P+GQ AA ALG+T+ ++ RL++LPQA Sbjct: 94 TIDTALVSSIVAFMLFEAAYFSEIVRAGIQSIPKGQSAAAYALGMTYGQSMRLIILPQAF 153 Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380 R + P L Q + L ++S++ A+G D + + IL +Y ++S++ Sbjct: 154 RKMTPLLLQQTIILFQDSTMVYAIGLLDFFRTNYVRGDLMSLLTQYILFAGLVYFTISML 213 Query: 381 IALFMNRLNAKIAL 394 + RL ++++ Sbjct: 214 ATYAVKRLQRRLSV 227 >gi|209518061|ref|ZP_03266891.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. H160] gi|209501467|gb|EEA01493.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. H160] Length = 250 Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 47/135 (34%), Positives = 78/135 (57%), Gaps = 4/135 (2%) Query: 251 LGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306 +GQF I S + P +M ++L+ TA + AEI+R GL+AVP GQ+EA ++GL+ Sbjct: 78 MGQFGIIRESFMWPVLRDPYMCAVLSLALCTAGYTAEIIRGGLMAVPVGQIEAGYSIGLS 137 Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 R V+ P A+R +P +++ + L+K+++LA V ++ V II QT + E+ Sbjct: 138 GFALLRRVIGPIALRQCLPAYSTEAVLLVKSTALASLVTVWEVTGVAQQIIQQTYRTTEV 197 Query: 367 ILIWMFIYLSLSIMI 381 + IYL L+ +I Sbjct: 198 FICAALIYLFLNFVI 212 >gi|70728432|ref|YP_258181.1| general amino acid ABC transporter permease [Pseudomonas fluorescens Pf-5] gi|68342731|gb|AAY90337.1| general amino acid ABC transporter, permease protein [Pseudomonas fluorescens Pf-5] Length = 365 Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 34/81 (41%), Positives = 59/81 (72%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I + + +A++AE+VR GL A+P+GQ EAA A+GL + +A LV+LPQA++ +IP + + Sbjct: 235 IGVILFQSAYVAEVVRGGLQAIPKGQYEAAAAMGLGYWRAMGLVILPQALKLVIPGIVNT 294 Query: 331 YLNLLKNSSLAVAVGFADLVS 351 ++ L K++SL + +G DL++ Sbjct: 295 FIALFKDTSLVIIIGLFDLLN 315 >gi|330808726|ref|YP_004353188.1| putative amino acid ABC transporter, permease component [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327376834|gb|AEA68184.1| putative amino acid ABC transporter, permease component [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 220 Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 60/208 (28%), Positives = 112/208 (53%), Gaps = 22/208 (10%) Query: 193 SFVLGIVLSL---FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249 S +G V+ L FA LS+H + + L +Y++ +I P LVLI L Y F P Sbjct: 31 SIAIGCVIGLAMAFAL-LSKH---RILRVLASVYVT--VIRNTPILVLILLIY---FALP 81 Query: 250 VLG-QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308 LG + + + P F+ I LS Y A++ E+ R GL+++ +GQ EA +A+GL Sbjct: 82 SLGIRLDKL------PSFV---ITLSLYAGAYLTEVFRGGLLSIHKGQREAGLAIGLGEW 132 Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368 + + +P +R+++P L++ +++L K++SLA A+ +L I ++ + IE L Sbjct: 133 QVKAYITVPVMLRNVLPALSNNFISLFKDTSLAAAIAVPELTYYARKINVESYRVIETWL 192 Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKE 396 + +Y++ +IA+ + ++A++ Sbjct: 193 VTTALYVAACYLIAMVLRYFEQRLAIRR 220 >gi|285808423|gb|ADC35949.1| putative amino acid ABC transporter permease/substrate binding protein [uncultured bacterium 98] Length = 133 Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 46/126 (36%), Positives = 69/126 (54%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P F++ I L AA+ +EI R L+AVPRGQ++AA LGLT R+ RLV PQA R Sbjct: 2 PAFLAALIGLGLNYAAYESEIYRGALLAVPRGQLDAARTLGLTERQILRLVRGPQAFRLA 61 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 + P+T+ ++ LLK+SSL + +L + G + + +YL LS+ +A Sbjct: 62 LAPMTNDFIALLKDSSLVSVITVVELTKQTSIFASNIGSWVVPGAMCAAMYLVLSLPLAR 121 Query: 384 FMNRLN 389 R+ Sbjct: 122 LARRIE 127 >gi|257487795|ref|ZP_05641836.1| amino acid ABC transporter permease [Pseudomonas syringae pv. tabaci ATCC 11528] gi|331008516|gb|EGH88572.1| amino acid ABC transporter permease [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 220 Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 47/164 (28%), Positives = 89/164 (54%), Gaps = 11/164 (6%) Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292 P LVLI L Y F P LG + S + LS Y A++ E+ R+GL+++ Sbjct: 68 PILVLILLIY---FALPGLG--------IRLDKLASFIVTLSLYAGAYLTEVFRAGLLSI 116 Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352 +GQ EA +A+GL + +++P +R+++P L++ +++L K++SLA A+ +L Sbjct: 117 HKGQREAGLAIGLGEWQVRAYIIVPVMLRNVLPALSNNFISLFKDTSLAAAIAVPELTYY 176 Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 I ++ + IE L+ +Y+ +IA+ + L ++A++ Sbjct: 177 ARKINVESYRVIETWLVTTALYVVACYVIAMLLRTLEQRLAIRR 220 >gi|225629164|ref|ZP_03787197.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family protein [Brucella ceti str. Cudo] gi|261323080|ref|ZP_05962277.1| amino acid ABC transporter permease [Brucella neotomae 5K33] gi|261756882|ref|ZP_06000591.1| cystine transport system permease [Brucella sp. F5/99] gi|225615660|gb|EEH12709.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family protein [Brucella ceti str. Cudo] gi|261299060|gb|EEY02557.1| amino acid ABC transporter permease [Brucella neotomae 5K33] gi|261736866|gb|EEY24862.1| cystine transport system permease [Brucella sp. F5/99] Length = 250 Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 40/126 (31%), Positives = 77/126 (61%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + I + A+ +EI+R+ + +VP+GQ EAA ++G++ R+A +LPQA R+ +P Sbjct: 113 FPAALIGFTLNIGAYSSEIIRAVISSVPKGQWEAAYSIGMSWRQALIRTILPQATRTAVP 172 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PL++ +++L+K++SLA A+ +L I+ T + + + + IYL+LS +++ Sbjct: 173 PLSNTFISLIKDTSLAAAITVPELFQSAQRIVATTYEPLILYIEAALIYLALSSILSALQ 232 Query: 386 NRLNAK 391 RL + Sbjct: 233 VRLERR 238 >gi|125718753|ref|YP_001035886.1| amino acid ABC transporter permease/amino acid-binding protein [Streptococcus sanguinis SK36] gi|125498670|gb|ABN45336.1| Amino acid ABC transporter, amino acid-binding protein/permease protein, putative [Streptococcus sanguinis SK36] Length = 521 Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 40/106 (37%), Positives = 65/106 (61%) Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 +S T A+++EIVR G+ AV +GQ EAA ALG+TH + R ++LPQ +R+I+P ++++ Sbjct: 383 VSINTGAYMSEIVRGGIFAVDKGQFEAATALGMTHGQTMRKIVLPQVVRNILPATGNEFV 442 Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378 +K++S+ + +L G TI QT Q + I IY L+ Sbjct: 443 INIKDTSVLNVISVVELYFSGNTIATQTYQYFQTFTIIAVIYFVLT 488 Score = 37.7 bits (86), Expect = 3.4, Method: Compositional matrix adjust. Identities = 28/88 (31%), Positives = 40/88 (45%), Gaps = 11/88 (12%) Query: 96 TFWLAFSGMIPATIIGTLVGAGRL---SANKLVA-------WICRVYVEVFRNIPPLVVI 145 T ++ +G I IIG L+G R S NKL+A W VY+E+FR P +V Sbjct: 299 TLLISITGTIAGLIIGLLIGVYRTAPASKNKLLASLQKIFGWFLNVYIEIFRGTPMIVQS 358 Query: 146 FFLYKSVLSVLPIP-DHSIVLPFGMFLN 172 +Y I D +I F + +N Sbjct: 359 MVIYYGTAQAFGISIDRTIAAIFIVSIN 386 >gi|157157239|ref|YP_001463222.1| L-cystine ABC transporter, permease protein [Escherichia coli E24377A] gi|157079269|gb|ABV18977.1| L-cystine ABC transporter, permease protein [Escherichia coli E24377A] Length = 222 Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 58/207 (28%), Positives = 108/207 (52%), Gaps = 18/207 (8%) Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251 F +LG +L+L RLS + P+ +++ F I LIA + +++ P Sbjct: 32 FGLLLGFILALM--RLSPIW--------PVRWMARFYISIFRGTPLIAQLFMIYYGLP-- 79 Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311 QF G + P S I LS TAA+ AE +R+ + ++ +GQ EAA ++G+T + Sbjct: 80 -QF----GIELDP-IPSAMIGLSLNTAAYAAETLRAAISSIDKGQWEAAASIGMTPWQTM 133 Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371 R +LPQA R +PPL++ +++L+K++SLA + +L I ++T + + L Sbjct: 134 RRAILPQAARVALPPLSNSFISLVKDTSLAATIQVPELFRQAQLITSRTLEVFTMYLAAS 193 Query: 372 FIYLSLSIMIALFMNRLNAKIALKEKK 398 IY ++ +++ N ++ +E++ Sbjct: 194 LIYWIMATVLSTLQNHFENQLNRQERE 220 Score = 36.6 bits (83), Expect = 6.3, Method: Compositional matrix adjust. Identities = 28/97 (28%), Positives = 45/97 (46%), Gaps = 8/97 (8%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G T L+ GM ++G ++ RLS V W+ R Y+ +FR P + +F + Sbjct: 15 LLKGAGYTLQLSIGGMFFGLLLGFILALMRLSPIWPVRWMARFYISIFRGTPLIAQLFMI 74 Query: 149 YKSV----LSVLPIPDHSIVLPFGMFLNNRGLSFPTL 181 Y + + + PIP I G+ LN + TL Sbjct: 75 YYGLPQFGIELDPIPSAMI----GLSLNTAAYAAETL 107 >gi|312883095|ref|ZP_07742826.1| ABC transporter: Transmembrane protein [Vibrio caribbenthicus ATCC BAA-2122] gi|309369255|gb|EFP96776.1| ABC transporter: Transmembrane protein [Vibrio caribbenthicus ATCC BAA-2122] Length = 297 Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 45/145 (31%), Positives = 77/145 (53%) Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306 D+ Q F G + +S + + ++A+IAEI+R+GL V +GQ EAA +LGL+ Sbjct: 146 DEVSSWQLIFFGPPNLWENLLSGVLCVGFLSSAYIAEIIRAGLDGVAKGQWEAADSLGLS 205 Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 + R ++ PQ + S+ P L Q ++L+K++S+ + ++ VG I N +G EI Sbjct: 206 NWVKYRYIIAPQVIASVTPTLAGQAISLVKDTSIVSLISIQEMTFVGTEIANSSGLIFEI 265 Query: 367 ILIWMFIYLSLSIMIALFMNRLNAK 391 LI Y L + +++ L K Sbjct: 266 WLIIGLFYFLLCLSLSVTFKSLEKK 290 >gi|220913575|ref|YP_002488884.1| polar amino acid ABC transporter inner membrane protein [Arthrobacter chlorophenolicus A6] gi|219860453|gb|ACL40795.1| polar amino acid ABC transporter, inner membrane subunit [Arthrobacter chlorophenolicus A6] Length = 263 Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 43/131 (32%), Positives = 78/131 (59%), Gaps = 4/131 (3%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I+L +A+IAE +R+GL AVP+GQ+EAA +LG+ +A +++PQA + ++PPLT++ Sbjct: 133 ISLGIVASAYIAETLRAGLQAVPKGQLEAARSLGMPQWRAMVTIVIPQAFKIVLPPLTNE 192 Query: 331 YLNLLKNSSLAVAVGFA----DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386 + L K+SSL +G +L G I+ G + +L+ YL ++I ++L Sbjct: 193 VILLTKDSSLIYVLGLTASQYELTKFGRDGISSLGAGLTPLLVAGAFYLVVTIPLSLLAR 252 Query: 387 RLNAKIALKEK 397 + ++ A ++ Sbjct: 253 KFESRSARTKR 263 >gi|326804127|ref|YP_004321945.1| ABC transporter, permease protein [Aerococcus urinae ACS-120-V-Col10a] gi|326650473|gb|AEA00656.1| ABC transporter, permease protein [Aerococcus urinae ACS-120-V-Col10a] Length = 495 Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 44/126 (34%), Positives = 74/126 (58%), Gaps = 4/126 (3%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IA+S AA+I+EI R G+++V RGQ+EAA +LGL + + V+ PQ++R + P L ++ Sbjct: 370 IAVSLNAAAYISEIFRGGILSVDRGQVEAARSLGLNYWTTMKKVVFPQSLRPVWPSLVNE 429 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL----SIMIALFMN 386 L+K+SS+ +G A+L + + T Q + I M Y L S+ + L+ N Sbjct: 430 AATLIKDSSIVSTIGVAELTFQTRAVTSLTYQGTIPLFISMCCYFVLTFVTSMALRLYEN 489 Query: 387 RLNAKI 392 ++ AK+ Sbjct: 490 KMQAKV 495 >gi|167035541|ref|YP_001670772.1| polar amino acid ABC transporter inner membrane subunit [Pseudomonas putida GB-1] gi|166862029|gb|ABZ00437.1| polar amino acid ABC transporter, inner membrane subunit [Pseudomonas putida GB-1] Length = 365 Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 38/94 (40%), Positives = 63/94 (67%), Gaps = 6/94 (6%) Query: 264 PEFMSL------YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317 PE MS I + + +A+IAE+VR GL A+P+GQ EAA A+GL + ++ LV+LP Sbjct: 222 PEGMSFDKLLRAMIGVILFQSAYIAEVVRGGLQAIPKGQYEAAAAMGLGYWRSMGLVILP 281 Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 QA++ +IP + + ++ L K++SL + +G DL++ Sbjct: 282 QALKLVIPGIVNTFIALFKDTSLVIIIGLFDLLN 315 >gi|113869257|ref|YP_727746.1| ABC transporter permease [Ralstonia eutropha H16] gi|113528033|emb|CAJ94378.1| ABC-type transporter, permease component: PAAT family [Ralstonia eutropha H16] Length = 217 Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 39/134 (29%), Positives = 78/134 (58%), Gaps = 1/134 (0%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P+F + +A + AA+ AEI R+G+ +V RGQ EA+ ALG+T+ + R V+LPQ + + Sbjct: 85 PDFPAAVVAFALNYAAYFAEIFRAGIKSVDRGQYEASKALGMTYFQTMRRVVLPQMVSRV 144 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 +PP++++ + L+K++SL + D++ I+ + ++ +F YL +++++ Sbjct: 145 LPPVSNETITLIKDTSLIYVLALNDILRTARGIVQRDFTTTPFLVAALF-YLVMTLILTW 203 Query: 384 FMNRLNAKIALKEK 397 F L + A + Sbjct: 204 FFQNLEKRYAKHDD 217 >gi|90409068|ref|ZP_01217193.1| amino acid ABC transporter, permease protein [Psychromonas sp. CNPT3] gi|90309825|gb|EAS37985.1| amino acid ABC transporter, permease protein [Psychromonas sp. CNPT3] Length = 359 Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 32/82 (39%), Positives = 60/82 (73%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I ++ + +A+IAE++R GL A+P+GQ EAA +LGL++ K L++LPQA++ IP L Sbjct: 231 IGITLFQSAYIAEVIRGGLQAIPKGQYEAAKSLGLSYWKGMLLIILPQALKISIPNLVGS 290 Query: 331 YLNLLKNSSLAVAVGFADLVSV 352 +++L K+++L + +G D++++ Sbjct: 291 FISLFKDTTLVLIIGLFDVLAM 312 >gi|73542697|ref|YP_297217.1| amino acid ABC transporter permease [Ralstonia eutropha JMP134] gi|72120110|gb|AAZ62373.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Ralstonia eutropha JMP134] Length = 217 Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 39/134 (29%), Positives = 78/134 (58%), Gaps = 1/134 (0%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P+F + +A + AA+ AEI R+G+ +V RGQ EA+ ALG+T+ + R V+LPQ + + Sbjct: 85 PDFPAAVVAFALNYAAYFAEIFRAGIKSVDRGQYEASKALGMTYFQTMRRVVLPQMVSRV 144 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 +PP++++ + L+K++SL + D++ I+ + ++ +F YL +++++ Sbjct: 145 LPPVSNETITLIKDTSLIYVLALNDILRTARGIVQRDFTTTPFLVAALF-YLLMTLILTW 203 Query: 384 FMNRLNAKIALKEK 397 F L + A + Sbjct: 204 FFQNLEKRYAKHDD 217 >gi|23098332|ref|NP_691798.1| amino acid ABC transporter permease [Oceanobacillus iheyensis HTE831] gi|22776558|dbj|BAC12833.1| amino acid ABC transporter permease [Oceanobacillus iheyensis HTE831] Length = 230 Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 41/122 (33%), Positives = 70/122 (57%) Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 +AA+IAEI RS L +V RGQ E+A AL +T+ R ++LPQA R IPPLT+ +++++K Sbjct: 109 SAAYIAEINRSSLNSVDRGQWESAKALNMTYWHTLRKIILPQATRIAIPPLTNVFMDIVK 168 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 +SL + +L + + A+ + ++ IY + I+I + RL + ++ Sbjct: 169 ATSLTAVITVPELFQKAQIVTGREFDAMTVYILVALIYWPICILIGMLQERLEKRYSVYV 228 Query: 397 KK 398 K Sbjct: 229 AK 230 Score = 37.0 bits (84), Expect = 5.7, Method: Compositional matrix adjust. Identities = 21/61 (34%), Positives = 29/61 (47%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 IL G T +A +GM I G + R S L+ W R+Y+ R P LV +F + Sbjct: 25 ILEGLPYTIMIAVAGMAIGLIFGLFLALARDSKTILLRWPSRIYISFMRGTPMLVFLFII 84 Query: 149 Y 149 Y Sbjct: 85 Y 85 >gi|330950140|gb|EGH50400.1| amino acid ABC transporter ATP-binding protein [Pseudomonas syringae Cit 7] Length = 403 Score = 76.3 bits (186), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 63/178 (35%), Positives = 94/178 (52%), Gaps = 14/178 (7%) Query: 185 TNAKIFVFSFVLGIVLS--LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY 242 T ++ V S+ G+ L L + RLS H + +L YI +L +P LVL+ Y Sbjct: 23 TVVQLSVLSWTAGLALGFLLASARLSTHAWLRVPASL---YI--WLFRSIPLLVLLVFVY 77 Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302 L Q S +S F S IAL A++AEI R GL++V +GQ EAA A Sbjct: 78 NLP-------QLFPASSSVLSQPFYSGLIALVLTETAYMAEIHRGGLLSVLKGQREAARA 130 Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 LG+ A RLV++PQA+R +P LT++Y+ ++K +SL + +L+ VG + Q Sbjct: 131 LGIRGLGAQRLVVIPQAIRISLPTLTNEYVTIVKLTSLVSVISLNELLLVGQRLYAQN 188 >gi|169631316|ref|YP_001704965.1| amino acid ABC transporter permease [Mycobacterium abscessus ATCC 19977] gi|169243283|emb|CAM64311.1| Putative amino acid ABC transporter, permease protein [Mycobacterium abscessus] Length = 293 Score = 76.3 bits (186), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 39/128 (30%), Positives = 76/128 (59%), Gaps = 3/128 (2%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I L+ + A+ AEI+R G+++V GQ+EAA ALG+ R+ ++LPQAMRS++P ++ Sbjct: 166 IGLTLHQGAYFAEIIRGGILSVDEGQLEAAAALGIPRRRQFFRIVLPQAMRSVMPNAANE 225 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI---WMFIYLSLSIMIALFMNR 387 ++L+K +S+ + ADL I + G+ + ++++ W + S+ ++ ++ R Sbjct: 226 VISLVKGTSIVSTMAIADLFYQVQVIFGRNGRVVPLLMVATAWYIVITSVLTVVQYYIER 285 Query: 388 LNAKIALK 395 A+ A + Sbjct: 286 HYARGAHR 293 >gi|157165564|ref|YP_001467259.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Campylobacter concisus 13826] gi|112801999|gb|EAT99343.1| amino acid ABC tansporter, permease protein, His/Glu/Gln/Arg/opine family [Campylobacter concisus 13826] Length = 236 Score = 76.3 bits (186), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 51/152 (33%), Positives = 93/152 (61%), Gaps = 16/152 (10%) Query: 249 PVLGQ---FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305 PV+ Q F+ + +T S F IAL ++A++AEIVRSG+ +V +GQMEAA A+GL Sbjct: 87 PVILQLLIFSVVIFATWSDNFYVAVIALGLNSSAYVAEIVRSGINSVDKGQMEAARAMGL 146 Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI- 364 + + R ++ PQA ++I+P L +++++L K +S+ VG+ +V + T+ +++ QA+ Sbjct: 147 NYYVSMREIVFPQATKNILPALANEFISLFKETSV---VGYISVVDI--TMQSKSLQAVF 201 Query: 365 ----EIILIWMFIYLSL---SIMIALFMNRLN 389 +I + Y+S+ ++++ L RLN Sbjct: 202 YSPEPVIFTGIVYYVSVKFFTLLVKLLERRLN 233 >gi|206579195|ref|YP_002238837.1| amino acid ABC transporter, permease/ATP-binding protein, His/Glu/Gln/Arg/opine family [Klebsiella pneumoniae 342] gi|290509794|ref|ZP_06549165.1| amino acid ABC transporter ATP-binding protein [Klebsiella sp. 1_1_55] gi|206568253|gb|ACI10029.1| amino acid ABC transporter, permease/ATP-binding protein, His/Glu/Gln/Arg/opine family [Klebsiella pneumoniae 342] gi|289779188|gb|EFD87185.1| amino acid ABC transporter ATP-binding protein [Klebsiella sp. 1_1_55] Length = 506 Score = 76.3 bits (186), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 60/206 (29%), Positives = 104/206 (50%), Gaps = 14/206 (6%) Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252 S VLG +L+L A + R + + LYI +L +P LVL+ Y + P Sbjct: 35 SIVLGFILAL-AKQSPRGWLSTPAR----LYI--WLFRSMPLLVLLIFVYNMPQALPSFA 87 Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312 ++ F + +A+ AA+IAEI R GL+++PRGQ EAA ALGL + Sbjct: 88 -------PVLNDPFWAGLLAMVLSEAAYIAEIHRGGLLSIPRGQSEAARALGLRYAGIQW 140 Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372 V++PQA+R +P L ++Y+ ++K SSL + +++ VG + +Q +E + F Sbjct: 141 RVIIPQALRVALPALANEYIAIVKLSSLVSVISLTEILMVGQQLYSQNFLVMETMTAVAF 200 Query: 373 IYLSLSIMIALFMNRLNAKIALKEKK 398 Y+ + + + RL + + ++ Sbjct: 201 YYIFIVTVFDFLLKRLENYLDVTQRN 226 >gi|205372795|ref|ZP_03225605.1| amino acid ABC transporter (permease) [Bacillus coahuilensis m4-4] Length = 230 Score = 76.3 bits (186), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 39/128 (30%), Positives = 78/128 (60%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F S IA S A+ +EIVR+ + ++P+GQ EA ++G+T+R+ + ++LPQA R IP Sbjct: 98 FPSAVIAFSLNVGAYASEIVRASIESIPKGQWEAGYSVGMTYRQTLKRIVLPQAARVSIP 157 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PL++ +++L+K++SLA V A++ I Q + + + F+Y + ++++ Sbjct: 158 PLSNTFISLVKDTSLASLVLVAEMFRKAQEIAATNYQFLLVYMEAAFLYWVICFILSIAQ 217 Query: 386 NRLNAKIA 393 +R+ +++ Sbjct: 218 DRIEIRLS 225 >gi|163839929|ref|YP_001624334.1| glutamate transport system permease protein [Renibacterium salmoninarum ATCC 33209] gi|162953405|gb|ABY22920.1| glutamate transport system permease protein [Renibacterium salmoninarum ATCC 33209] Length = 512 Score = 76.3 bits (186), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 41/88 (46%), Positives = 62/88 (70%), Gaps = 3/88 (3%) Query: 263 SPEFMSLYI-ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321 +P F+ L I ALS YTA +++E +R+G+ VP GQ EA+ A+GL + LV+LPQA R Sbjct: 81 NPGFVPLAIIALSLYTATYVSEAIRAGINTVPVGQAEASRAIGLPFGQTMSLVILPQAFR 140 Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADL 349 +++PP+ S ++ LLKN++ VA GF+ L Sbjct: 141 AVVPPMMSVFIALLKNTT--VAAGFSVL 166 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 48/166 (28%), Positives = 90/166 (54%), Gaps = 29/166 (17%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPTLVLIALKYQL 244 V S +LG+VL++ R G +A+PLL + + +GLP+ Sbjct: 295 VGSLILGMVLAVGRLSDRRWISVPVGWFTELFRAVPLLILMALMFYGLPS---------- 344 Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304 IG ++P F+++ + L Y + +AE++R+G++AVP+GQ EAA A+G Sbjct: 345 ------------IGFQGMTP-FIAVVVGLILYNGSVLAEVIRAGILAVPKGQSEAAYAIG 391 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 L + ++LLPQA+R+++P + +Q + LK+++L + + +L+ Sbjct: 392 LRKTRVMTMILLPQAVRTMLPVIIAQLVVALKDTALGFIITYQELL 437 >gi|328543626|ref|YP_004303735.1| ABC transporter, permease protein [Polymorphum gilvum SL003B-26A1] gi|326413370|gb|ADZ70433.1| ABC transporter, permease protein [Polymorphum gilvum SL003B-26A1] Length = 385 Score = 76.3 bits (186), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 33/87 (37%), Positives = 62/87 (71%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 + + + I ++ ++AA++AE+VR GL A+P+GQ E A+ALGL + + L++LPQA++ +I Sbjct: 247 KLLRVLIGVTLFSAAYMAEVVRGGLQAIPKGQYEGAMALGLRYWQMMGLIILPQALKLVI 306 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVS 351 P + + ++ L K+++L + VG DL+ Sbjct: 307 PGIVNTFIGLFKDTTLVLIVGMFDLLG 333 >gi|294787060|ref|ZP_06752314.1| glutamate permease [Parascardovia denticolens F0305] gi|315226710|ref|ZP_07868498.1| glutamate ABC superfamily ATP binding cassette transporter, membrane protein [Parascardovia denticolens DSM 10105] gi|294485893|gb|EFG33527.1| glutamate permease [Parascardovia denticolens F0305] gi|315120842|gb|EFT83974.1| glutamate ABC superfamily ATP binding cassette transporter, membrane protein [Parascardovia denticolens DSM 10105] Length = 229 Score = 76.3 bits (186), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 47/130 (36%), Positives = 79/130 (60%), Gaps = 8/130 (6%) Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 LS YTA+F++E +RSG+ +P GQ EA+ ALGLT ++ V+LPQA+R I PL + Sbjct: 103 GLSLYTASFVSESLRSGINTIPVGQAEASRALGLTFFQSITSVILPQALRGSIAPLGNTL 162 Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQT-----GQAIEIILIWMFIYLSLSIMIALFMN 386 + LLKNS++A A A + + +++++ Q ++I L++ Y+ L I I L Sbjct: 163 IALLKNSTVAAA---ASVTTETSSLMSEMLEFHPSQIVQIFLVFALGYVILIIPIGLLTT 219 Query: 387 RLNAKIALKE 396 L+ ++A++ Sbjct: 220 YLSNRLAVRR 229 >gi|261213026|ref|ZP_05927310.1| amino acid ABC transporter permease protein [Vibrio sp. RC341] gi|260838091|gb|EEX64768.1| amino acid ABC transporter permease protein [Vibrio sp. RC341] Length = 298 Score = 76.3 bits (186), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 44/134 (32%), Positives = 75/134 (55%) Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317 G + + +S + + ++A+IAEIVR+GL +P+GQ EAA +LGL R V+ P Sbjct: 158 GPARLWENLLSGVLCIGLLSSAYIAEIVRAGLANIPQGQWEAADSLGLPTWVKYRYVIAP 217 Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377 Q + +I P L Q ++L+K++S+ + +L VG I N +G EI LI YL L Sbjct: 218 QVLTAITPALAGQTISLIKDTSIISLISIQELTFVGSEIANSSGLIFEIWLIVGAAYLVL 277 Query: 378 SIMIALFMNRLNAK 391 + +++ ++ + Sbjct: 278 CLSLSMLFKQVEKR 291 >gi|238793404|ref|ZP_04637029.1| Glutamine transport system permease protein glnP [Yersinia intermedia ATCC 29909] gi|238727177|gb|EEQ18706.1| Glutamine transport system permease protein glnP [Yersinia intermedia ATCC 29909] Length = 189 Score = 76.3 bits (186), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 42/129 (32%), Positives = 76/129 (58%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + + + + A+IAEI R ++++ G EA +ALGL+ R R V+ P A+R ++P Sbjct: 60 FSAAVVTIIINSGAYIAEITRGAVLSIHNGFREAGLALGLSKRDTLRYVIAPLALRRMLP 119 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PL +Q++ +K++SL + +G A+L G II +A+EI IYL +++ ++ + Sbjct: 120 PLGNQWIVSIKDTSLFIVIGVAELTRQGQEIIAGNFRAMEIWSAVAVIYLIITLALSFVL 179 Query: 386 NRLNAKIAL 394 RL K+ + Sbjct: 180 RRLERKLKI 188 >gi|225571603|ref|ZP_03780599.1| hypothetical protein CLOHYLEM_07701 [Clostridium hylemonae DSM 15053] gi|225159680|gb|EEG72299.1| hypothetical protein CLOHYLEM_07701 [Clostridium hylemonae DSM 15053] Length = 230 Score = 76.3 bits (186), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 57/210 (27%), Positives = 109/210 (51%), Gaps = 20/210 (9%) Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKA-----LPLLYISTFLIFGLPTLVLIALKY 242 KI F+ ++GI L F + R +++TGK L LY++ +I G P +V + + Y Sbjct: 31 KITFFAVLIGIALG-FLVAIVRSTYDRTGKLKILNLLCKLYLT--VIRGTPVVVQLLIIY 87 Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302 + F GS + + +A + A++AEI RSG++++ GQ EA + Sbjct: 88 FVIF------------GSMDIDKVIVAVLAFGINSGAYVAEIFRSGIMSIDNGQFEAGRS 135 Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362 LG + + +++PQA ++++P L ++++ LLK +S++ + DL G I +QT Sbjct: 136 LGFNYTQTMIHIIMPQAFKNVLPALGNEFIVLLKETSVSGYIAMQDLTKGGDIIRSQTFD 195 Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 A ++ IYL++ ++ +N L ++ Sbjct: 196 AFMPLIGVALIYLAMVLIFTKLVNMLERRL 225 >gi|317047450|ref|YP_004115098.1| polar amino acid ABC transporter inner membrane subunit [Pantoea sp. At-9b] gi|316949067|gb|ADU68542.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea sp. At-9b] Length = 290 Score = 76.3 bits (186), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 39/138 (28%), Positives = 83/138 (60%) Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320 TV F++ + LS A+ +E+VR+GL++V GQ EAA A+G+ +A + ++LPQAM Sbjct: 151 TVMTPFLAALLGLSINQGAYTSEVVRAGLLSVDTGQYEAAKAIGMPRLQALQRIILPQAM 210 Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380 R I+PP+ +++++++K +SLA + +++L+ I + +E++ + YL + + Sbjct: 211 RVILPPVGNEFISMIKTTSLASMIQYSELLYNTQNIYFANARVMELLFVAGIWYLIVVTV 270 Query: 381 IALFMNRLNAKIALKEKK 398 ++ ++L + ++ Sbjct: 271 LSFGQSQLERYFSRGHRR 288 >gi|152970013|ref|YP_001335122.1| putative ATP-binding component of a transport system [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|288935767|ref|YP_003439826.1| polar amino acid ABC transporter inner membrane subunit [Klebsiella variicola At-22] gi|150954862|gb|ABR76892.1| putative ATP-binding component of a transport system [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|288890476|gb|ADC58794.1| polar amino acid ABC transporter, inner membrane subunit [Klebsiella variicola At-22] Length = 506 Score = 76.3 bits (186), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 60/206 (29%), Positives = 104/206 (50%), Gaps = 14/206 (6%) Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252 S VLG +L+L A + R + + LYI +L +P LVL+ Y + P Sbjct: 35 SIVLGFILAL-AKQSPRGWLSTPAR----LYI--WLFRSMPLLVLLIFVYNMPQALPSFA 87 Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312 ++ F + +A+ AA+IAEI R GL+++PRGQ EAA ALGL + Sbjct: 88 -------PVLNDPFWAGLLAMVLSEAAYIAEIHRGGLLSIPRGQSEAARALGLRYAGIQW 140 Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372 V++PQA+R +P L ++Y+ ++K SSL + +++ VG + +Q +E + F Sbjct: 141 RVIIPQALRVALPALANEYIAIVKLSSLVSVISLTEILMVGQQLYSQNFLVMETMTAVAF 200 Query: 373 IYLSLSIMIALFMNRLNAKIALKEKK 398 Y+ + + + RL + + ++ Sbjct: 201 YYIFIVTVFDFLLKRLENYLDVTQRN 226 >gi|325689080|gb|EGD31088.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK115] Length = 521 Score = 76.3 bits (186), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 40/106 (37%), Positives = 65/106 (61%) Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 +S T A+++EIVR G+ AV +GQ EAA ALG+TH + R ++LPQ +R+I+P ++++ Sbjct: 383 VSINTGAYMSEIVRGGIFAVDKGQFEAATALGMTHGQTMRKIVLPQVVRNILPATGNEFV 442 Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378 +K++S+ + +L G TI QT Q + I IY L+ Sbjct: 443 INIKDTSVLNVISVVELYFSGNTIATQTYQYFQTFTIIAVIYFILT 488 Score = 37.7 bits (86), Expect = 3.0, Method: Compositional matrix adjust. Identities = 28/88 (31%), Positives = 40/88 (45%), Gaps = 11/88 (12%) Query: 96 TFWLAFSGMIPATIIGTLVGAGRL---SANKLVA-------WICRVYVEVFRNIPPLVVI 145 T ++ +G I IIG L+G R S NKL+A W VY+E+FR P +V Sbjct: 299 TLLISITGTIAGLIIGLLIGVYRTAPASKNKLLASLQKIFGWFLNVYIEIFRGTPMIVQS 358 Query: 146 FFLYKSVLSVLPIP-DHSIVLPFGMFLN 172 +Y I D +I F + +N Sbjct: 359 MVIYYGTAQAFGISIDRTIAAIFIVSIN 386 >gi|284048143|ref|YP_003398482.1| polar amino acid ABC transporter, inner membrane subunit [Acidaminococcus fermentans DSM 20731] gi|283952364|gb|ADB47167.1| polar amino acid ABC transporter, inner membrane subunit [Acidaminococcus fermentans DSM 20731] Length = 231 Score = 76.3 bits (186), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 34/81 (41%), Positives = 56/81 (69%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 ++L Y A++AE++R+G+ AVPRGQ EAA A G + + ++LPQ ++ I+PP +Q Sbjct: 98 VSLGLYHGAYMAEVIRAGIEAVPRGQFEAADAQGFNYTQKMAYIILPQTVKIILPPTVNQ 157 Query: 331 YLNLLKNSSLAVAVGFADLVS 351 NL+KN+++ +G ADL+S Sbjct: 158 IGNLIKNTAVLYIIGGADLIS 178 Score = 37.0 bits (84), Expect = 4.9, Method: Compositional matrix adjust. Identities = 21/58 (36%), Positives = 34/58 (58%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 GF T A G++ AT++G L+G +S+ +L I R+YVE +N P ++ + LY Sbjct: 23 GFSVTVESAIGGILIATVLGILLGLMGVSSKRLPHAINRIYVEAIQNTPLILQLCLLY 80 >gi|227550833|ref|ZP_03980882.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus faecium TX1330] gi|293379248|ref|ZP_06625394.1| ABC transporter, permease protein [Enterococcus faecium PC4.1] gi|293573051|ref|ZP_06683992.1| amino acid ABC transporter, amino acid-binding/permease protein [Enterococcus faecium E980] gi|227180028|gb|EEI61000.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus faecium TX1330] gi|291606870|gb|EFF36251.1| amino acid ABC transporter, amino acid-binding/permease protein [Enterococcus faecium E980] gi|292642044|gb|EFF60208.1| ABC transporter, permease protein [Enterococcus faecium PC4.1] Length = 530 Score = 76.3 bits (186), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 66/237 (27%), Positives = 113/237 (47%), Gaps = 38/237 (16%) Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLF------ATRLSRHFHEKTGKALPLL 222 MFL GL+ + T V LG+++ +F L+R F +K G AL + Sbjct: 300 MFLRGAGLTLFIALIGT-----VVGTTLGLLIGVFRSVPESGNALTRFF-QKIGNALLSI 353 Query: 223 YISTFLIFGLPTLVL-------IALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSC 275 Y+ F G P +V +AL + + ++ + +L+I +S Sbjct: 354 YVEIFR--GTPMMVQAMVIFYGLALAFGISLNRTI----------------AALFI-VSL 394 Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335 T A++ EIVR G+ AV GQ EAA A+G+TH + R V++PQ +R+I+P ++++ + Sbjct: 395 NTGAYMTEIVRGGIFAVDEGQFEAAQAIGMTHGQTMRKVVIPQVLRNILPATGNEFVINI 454 Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 K++++ +G ADL G + Q + I IYL ++ I + + KI Sbjct: 455 KDTAVLSVIGVADLFFQGNSASGANFQFFQTFTIVGIIYLVMTFTITRILRAVEKKI 511 >gi|261343375|ref|ZP_05971020.1| arginine ABC transporter, permease protein ArtQ [Providencia rustigianii DSM 4541] gi|282568515|gb|EFB74050.1| arginine ABC transporter, permease protein ArtQ [Providencia rustigianii DSM 4541] Length = 246 Score = 76.3 bits (186), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 61/198 (30%), Positives = 99/198 (50%), Gaps = 25/198 (12%) Query: 217 KALPLLYISTFLIFGLPTLVLIAL------------KYQLHFDKPVL----GQFNFIGGS 260 + LP L + F+ FG TL LI L + L D + GQF++ Sbjct: 55 RGLPELLVVLFVYFG--TLQLINLLGDGIAINLGFWQGTLQVDPSIFFADSGQFDY---- 108 Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320 +P F+ IAL+ A++ ++ +R L AVP GQ EA +ALGLT R ++PQ Sbjct: 109 --TP-FVCGVIALALLYASYASQTLRGALKAVPYGQWEAGLALGLTKRTIFFRFIMPQMW 165 Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380 R +P L +Q+L LLK+++L + DL+ TI+N+T + I IYL+++++ Sbjct: 166 RHALPGLGNQWLVLLKDTALVSLISVNDLMLQTKTIVNRTHEPFTWYAIVGLIYLAITLL 225 Query: 381 IALFMNRLNAKIALKEKK 398 L + R+ + E+ Sbjct: 226 SQLVLKRIELRTTRFERS 243 >gi|293364251|ref|ZP_06610977.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus oralis ATCC 35037] gi|291317097|gb|EFE57524.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus oralis ATCC 35037] Length = 543 Score = 76.3 bits (186), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 39/109 (35%), Positives = 66/109 (60%) Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 +S T A++ EIVR G++AV +GQ EAA ALG+TH + R ++LPQ +R+I+P ++++ Sbjct: 405 VSINTGAYMTEIVRGGILAVDKGQFEAATALGMTHNQTMRKIVLPQVVRNILPATGNEFV 464 Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 +K++S+ + +L G T+ QT Q + I IY L+ + Sbjct: 465 INIKDTSVLNVISVVELYFSGNTVATQTYQYFQTFTIIAVIYFVLTFTV 513 >gi|289522552|ref|ZP_06439406.1| glutamine ABC transporter, glutamine-binding protein/permease protein [Anaerobaculum hydrogeniformans ATCC BAA-1850] gi|289504388|gb|EFD25552.1| glutamine ABC transporter, glutamine-binding protein/permease protein [Anaerobaculum hydrogeniformans ATCC BAA-1850] Length = 221 Score = 76.3 bits (186), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 61/218 (27%), Positives = 103/218 (47%), Gaps = 36/218 (16%) Query: 177 SFPTL------TMDTNAKIFVFSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYI 224 S PTL T+ I VLG++L+ T R+ +++ +++P L + Sbjct: 11 SLPTLLEGTFVTIKLTILIVAMGLVLGLILAFCQTYGSKTLRIVVAVYDRIFRSIPELVL 70 Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284 + +G+P + G +SP F + +AL AA++ +I Sbjct: 71 LLLVFYGMPGI-----------------------GLRLSP-FYAAVVALGLRAAAYMGQI 106 Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344 R ++V Q+ AA +LG++ KA V+ PQAMR+ IPP ++Y +LK++SLA A+ Sbjct: 107 FRGSFMSVGSDQLTAAYSLGMSEYKAFIYVIFPQAMRAFIPPFANEYAIILKDTSLAYAI 166 Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382 G +L+ G II + + I L IY L+ +A Sbjct: 167 GVVELLRQGQYIITVEYEPLPIFLAIAGIYFVLTFGVA 204 >gi|209547509|ref|YP_002279427.1| polar amino acid ABC transporter inner membrane protein [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209538753|gb|ACI58687.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 324 Score = 76.3 bits (186), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 42/128 (32%), Positives = 76/128 (59%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +ALS A++ EI RSG+ ++ RGQ EA+ ++G R ++LPQA+ IIPP +Q Sbjct: 197 LALSLCYGAYMTEIFRSGIQSIDRGQWEASRSIGFGFGITMRKIILPQALPVIIPPTGNQ 256 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++++LK+SSL +G +L+ + T+ +T Q +E+++ +Y +SI + L R+ Sbjct: 257 FISMLKDSSLVSVIGVWELMFLARTLGQKTFQHMEMLISAAMLYWIMSICLELIQARIER 316 Query: 391 KIALKEKK 398 A + + Sbjct: 317 HYARSKVR 324 >gi|110678763|ref|YP_681770.1| amino acid ABC transporter, permease protein [Roseobacter denitrificans OCh 114] gi|109454879|gb|ABG31084.1| amino acid ABC transporter, permease protein [Roseobacter denitrificans OCh 114] Length = 432 Score = 76.3 bits (186), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 62/192 (32%), Positives = 101/192 (52%), Gaps = 16/192 (8%) Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232 +R L L M S LGIVL+L R K + +++I I G+ Sbjct: 219 SRDLGGFMLNMMLGVTCVSLSVPLGIVLAL-----GRQSSMPLIKWICVIFIE--FIRGV 271 Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292 P + L+ F V+ + F STV F+ + I ++ +++A+IAE++R GL A+ Sbjct: 272 PLITLL-------FVASVMLAYFFPPESTVD-LFLRVVIMITMFSSAYIAEVIRGGLAAL 323 Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS- 351 P+GQ E A +LGL + +ATRL++LPQA++ IP + + + L K+++L + DLV Sbjct: 324 PKGQYEGADSLGLDYAQATRLIILPQALKISIPGIVNVAVGLFKDTTLVSVISMFDLVGM 383 Query: 352 VGGTIINQTGQA 363 + G I+ T A Sbjct: 384 IRGPILASTDWA 395 >gi|312973871|ref|ZP_07788043.1| L-cystine transport system permease protein tcyB [Escherichia coli 1827-70] gi|310332466|gb|EFP99701.1| L-cystine transport system permease protein tcyB [Escherichia coli 1827-70] Length = 222 Score = 76.3 bits (186), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 62/207 (29%), Positives = 109/207 (52%), Gaps = 18/207 (8%) Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251 F +LG +L+L RLS + + L YIS F G P LIA + +++ P Sbjct: 32 FGLLLGFILALM--RLSPIWLVRW---LARFYISIFR--GTP---LIAQLFMIYYGLP-- 79 Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311 QF G + P S I LS TAA+ AE +R+ + ++ +GQ EAA ++G+T + Sbjct: 80 -QF----GIELDP-IPSAMIGLSLNTAAYAAETLRAAISSIDKGQWEAAASIGMTPWQTM 133 Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371 R +LPQA R +PPL++ +++L+K++SLA + +L I ++T + + L Sbjct: 134 RRAILPQAARVALPPLSNSFISLVKDTSLAATIQVPELFRQAQLITSRTLEVFTMYLAAS 193 Query: 372 FIYLSLSIMIALFMNRLNAKIALKEKK 398 IY ++ +++ N ++ +E++ Sbjct: 194 LIYWIMATVLSTLQNHFENQLNRQERE 220 Score = 39.7 bits (91), Expect = 0.85, Method: Compositional matrix adjust. Identities = 29/97 (29%), Positives = 46/97 (47%), Gaps = 8/97 (8%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G T L+ GM ++G ++ RLS LV W+ R Y+ +FR P + +F + Sbjct: 15 LLKGAGYTLQLSIGGMFFGLLLGFILALMRLSPIWLVRWLARFYISIFRGTPLIAQLFMI 74 Query: 149 YKSV----LSVLPIPDHSIVLPFGMFLNNRGLSFPTL 181 Y + + + PIP I G+ LN + TL Sbjct: 75 YYGLPQFGIELDPIPSAMI----GLSLNTAAYAAETL 107 >gi|326315799|ref|YP_004233471.1| polar amino acid ABC transporter inner membrane subunit [Acidovorax avenae subsp. avenae ATCC 19860] gi|323372635|gb|ADX44904.1| polar amino acid ABC transporter, inner membrane subunit [Acidovorax avenae subsp. avenae ATCC 19860] Length = 217 Score = 76.3 bits (186), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 40/133 (30%), Positives = 77/133 (57%), Gaps = 1/133 (0%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P+F + +A + AA+ AEI R+G+ ++ RGQ EAA LG+T+ + R ++LPQ +R I Sbjct: 85 PDFPAAVVAFALNYAAYFAEIFRAGIQSIDRGQYEAAKVLGMTYGQTMRRIVLPQMVRRI 144 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 +PP++++ + L+K++SL + DL+ I+ + ++ F YL +++++ Sbjct: 145 LPPMSNETITLVKDTSLIYVLALNDLLRAARGIVQRDFTTTPFLVAAAF-YLVMTLVLTW 203 Query: 384 FMNRLNAKIALKE 396 RL + A + Sbjct: 204 GFQRLERRYARHD 216 >gi|257887913|ref|ZP_05667566.1| amino acid ABC transporter [Enterococcus faecium 1,141,733] gi|257893286|ref|ZP_05672939.1| amino acid ABC transporter [Enterococcus faecium 1,231,408] gi|257896470|ref|ZP_05676123.1| amino acid ABC transporter [Enterococcus faecium Com12] gi|257823967|gb|EEV50899.1| amino acid ABC transporter [Enterococcus faecium 1,141,733] gi|257829665|gb|EEV56272.1| amino acid ABC transporter [Enterococcus faecium 1,231,408] gi|257833035|gb|EEV59456.1| amino acid ABC transporter [Enterococcus faecium Com12] Length = 526 Score = 76.3 bits (186), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 66/237 (27%), Positives = 113/237 (47%), Gaps = 38/237 (16%) Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLF------ATRLSRHFHEKTGKALPLL 222 MFL GL+ + T V LG+++ +F L+R F +K G AL + Sbjct: 296 MFLRGAGLTLFIALIGT-----VVGTTLGLLIGVFRSVPESGNALTRFF-QKIGNALLSI 349 Query: 223 YISTFLIFGLPTLVL-------IALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSC 275 Y+ F G P +V +AL + + ++ + +L+I +S Sbjct: 350 YVEIFR--GTPMMVQAMVIFYGLALAFGISLNRTI----------------AALFI-VSL 390 Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335 T A++ EIVR G+ AV GQ EAA A+G+TH + R V++PQ +R+I+P ++++ + Sbjct: 391 NTGAYMTEIVRGGIFAVDEGQFEAAQAIGMTHGQTMRKVVIPQVLRNILPATGNEFVINI 450 Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 K++++ +G ADL G + Q + I IYL ++ I + + KI Sbjct: 451 KDTAVLSVIGVADLFFQGNSASGANFQFFQTFTIVGIIYLVMTFTITRILRAVEKKI 507 >gi|255326763|ref|ZP_05367839.1| L-cystine transport system permease protein TcyB [Rothia mucilaginosa ATCC 25296] gi|255295980|gb|EET75321.1| L-cystine transport system permease protein TcyB [Rothia mucilaginosa ATCC 25296] Length = 267 Score = 76.3 bits (186), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 34/75 (45%), Positives = 58/75 (77%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 ++L +AA+I+E++R+GL A+P+GQMEAA +LG++H +A +++PQA R ++PPLT++ Sbjct: 136 LSLGMVSAAYISEVLRAGLQAIPKGQMEAARSLGMSHTRAMISIIIPQAFRVVLPPLTNE 195 Query: 331 YLNLLKNSSLAVAVG 345 + L K+SSL +G Sbjct: 196 VILLTKDSSLVYLLG 210 >gi|148549628|ref|YP_001269730.1| polar amino acid ABC transporter inner membrane subunit [Pseudomonas putida F1] gi|148513686|gb|ABQ80546.1| polar amino acid ABC transporter, inner membrane subunit [Pseudomonas putida F1] Length = 365 Score = 76.3 bits (186), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 38/94 (40%), Positives = 63/94 (67%), Gaps = 6/94 (6%) Query: 264 PEFMSL------YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317 PE MS I + + +A+IAE+VR GL A+P+GQ EAA A+GL + ++ LV+LP Sbjct: 222 PEGMSFDKLLRAMIGVILFQSAYIAEVVRGGLQAIPKGQYEAAAAMGLGYWRSMGLVILP 281 Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 QA++ +IP + + ++ L K++SL + +G DL++ Sbjct: 282 QALKLVIPGIVNTFIALFKDTSLVIIIGLFDLLN 315 >gi|171777495|ref|ZP_02919217.1| hypothetical protein STRINF_00044 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] gi|171283205|gb|EDT48629.1| hypothetical protein STRINF_00044 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] Length = 523 Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 39/109 (35%), Positives = 65/109 (59%) Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 +S T A+++EIVR G+ AV +GQ EAA ALG TH + R ++LPQ +R+I+P ++++ Sbjct: 386 VSINTGAYMSEIVRGGIFAVDKGQFEAATALGFTHGQTMRKIVLPQVVRNILPATGNEFV 445 Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 +K++S+ + +L G T+ QT Q + I IY L+ + Sbjct: 446 INIKDTSVLNVISVVELYFSGNTVATQTYQYFQTFTIIAIIYFVLTFTV 494 >gi|91228351|ref|ZP_01262279.1| amino acid ABC transproter, permease protein [Vibrio alginolyticus 12G01] gi|262392785|ref|YP_003284639.1| amino acid ABC transporter permease [Vibrio sp. Ex25] gi|269965280|ref|ZP_06179401.1| amino acid ABC transproter, permease protein [Vibrio alginolyticus 40B] gi|91188111|gb|EAS74415.1| amino acid ABC transproter, permease protein [Vibrio alginolyticus 12G01] gi|262336379|gb|ACY50174.1| amino acid ABC transporter permease protein [Vibrio sp. Ex25] gi|269830081|gb|EEZ84309.1| amino acid ABC transproter, permease protein [Vibrio alginolyticus 40B] Length = 223 Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 56/170 (32%), Positives = 96/170 (56%), Gaps = 15/170 (8%) Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALK 241 TM+ VFS +L ++L+ R F L LYIS F G P LV + L Sbjct: 22 TMEMATWGLVFSLILSVILANI-----RVFKLPVLDQLSQLYISFFR--GTPLLVQLFL- 73 Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301 L++ P + F + G F + I L+ + AA++AE +R+ +I + R QMEA++ Sbjct: 74 --LYYGLPQI--FPLMVGIDA---FSAAVIGLTLHFAAYMAESIRAAIIGIDRSQMEASL 126 Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 ++G+T +A R V+LPQA R +P L + +++++K++SLA +G A++++ Sbjct: 127 SVGMTTSQAMRRVILPQATRVALPSLMNYFIDMIKSTSLAFTLGVAEIMA 176 >gi|254224688|ref|ZP_04918304.1| amino acid ABC transporter, permease protein [Vibrio cholerae V51] gi|125622751|gb|EAZ51069.1| amino acid ABC transporter, permease protein [Vibrio cholerae V51] Length = 298 Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 44/134 (32%), Positives = 75/134 (55%) Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317 G + + +S + + ++A+IAEIVR+GL +P+GQ EAA +LGL R V+ P Sbjct: 158 GPARLWENLLSGVLCIGLLSSAYIAEIVRAGLANIPQGQWEAADSLGLPTWVKYRYVIAP 217 Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377 Q + +I P L Q ++L+K++S+ + +L VG I N +G EI LI YL L Sbjct: 218 QVLTAITPALAGQTISLIKDTSIISLISIQELTFVGSEIANSSGLIFEIWLIVGAAYLVL 277 Query: 378 SIMIALFMNRLNAK 391 + +++ ++ + Sbjct: 278 CLSLSMLFKQVEKR 291 Score = 37.4 bits (85), Expect = 4.7, Method: Compositional matrix adjust. Identities = 20/53 (37%), Positives = 29/53 (54%) Query: 90 LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142 L G V T L+ GM+ A ++G+L+G R V +V++ RNIPPL Sbjct: 66 LQGLVATLRLSLWGMVLALVLGSLIGIARSQKAWFVRLPANAFVQLVRNIPPL 118 >gi|330960988|gb|EGH61248.1| amino acid ABC transporter permease [Pseudomonas syringae pv. maculicola str. ES4326] Length = 220 Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 47/164 (28%), Positives = 89/164 (54%), Gaps = 11/164 (6%) Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292 P LVLI L Y F P LG + S + LS Y A++ E+ R+GL+++ Sbjct: 68 PILVLILLIY---FALPGLG--------IRLDKLASFIVTLSLYAGAYLTEVFRAGLLSI 116 Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352 +GQ EA +A+GL + +++P +R+++P L++ +++L K++SLA A+ +L Sbjct: 117 HKGQREAGLAIGLGEWQVRAYIIVPVMLRNVLPALSNNFISLFKDTSLAAAIAVPELTYY 176 Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 I ++ + IE L+ +Y+ +IA+ + L ++A++ Sbjct: 177 ARKINVESYRVIETWLVTTALYVVACYVIAMLLRALEQRLAIRR 220 >gi|323489869|ref|ZP_08095093.1| polar amino acid ABC transporter, inner membrane subunit [Planococcus donghaensis MPA1U2] gi|323396504|gb|EGA89326.1| polar amino acid ABC transporter, inner membrane subunit [Planococcus donghaensis MPA1U2] Length = 214 Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 59/232 (25%), Positives = 111/232 (47%), Gaps = 37/232 (15%) Query: 177 SFPTLTMDTNAKIFVFS------FVLGIVLSLFA-------TRLSRHFHEKTGKALPLLY 223 +FP L +++F+ F++G++++LF +++ F + + P + Sbjct: 7 AFPYLMEGLKVTLYIFAIAIVLGFLIGLIVALFRLAPLKILNWIAKIFVDAI-RGTPFIV 65 Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283 F+ FGL +L I+L D G + ++ A+ +E Sbjct: 66 QLFFIYFGLNSLAFISL------DNTTAG-----------------IVTVAINAGAYFSE 102 Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343 I+R+G+ ++ +GQ EAA +LGL + R ++LPQA R ++P +T+Q + LK++SL Sbjct: 103 IIRAGIQSIDKGQTEAARSLGLNSTQNMRYIVLPQAFRRMLPTITNQAIISLKDTSLLSV 162 Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395 +G ADL G + T A + LI IY + ++++ N + K L+ Sbjct: 163 IGVADLTQEGRIQASATFDAFNVYLILGIIYFVVIYLLSMLANYVERKFVLR 214 >gi|322517586|ref|ZP_08070455.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus vestibularis ATCC 49124] gi|322123846|gb|EFX95420.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus vestibularis ATCC 49124] Length = 569 Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 38/109 (34%), Positives = 66/109 (60%) Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 +S T A+++EIVR G+ AV +GQ EAA ALG TH + R ++LPQ +R+I+P ++++ Sbjct: 439 VSINTGAYMSEIVRGGIFAVDKGQFEAATALGFTHGQTMRKIVLPQVIRNILPATGNEFV 498 Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 +K++S+ + +L G T+ +QT Q + + IY L+ + Sbjct: 499 INIKDTSVLNVISVVELYFAGNTVASQTYQYFQTFFVIAAIYFVLTFTV 547 Score = 36.2 bits (82), Expect = 8.6, Method: Compositional matrix adjust. Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 10/64 (15%) Query: 96 TFWLAFSGMIPATIIGTLVGAGRLS---ANKLVA-------WICRVYVEVFRNIPPLVVI 145 T ++ G + T IG ++G R + ANK VA W+ VY+EVFR P +V Sbjct: 355 TLLISIIGTVVGTFIGLMIGVYRTAPKAANKFVALLQKLFGWVLNVYIEVFRGTPMIVQS 414 Query: 146 FFLY 149 +Y Sbjct: 415 MVIY 418 >gi|313885683|ref|ZP_07819432.1| putative glutamine ABC transporter, permease protein GlnP [Eremococcus coleocola ACS-139-V-Col8] gi|312619048|gb|EFR30488.1| putative glutamine ABC transporter, permease protein GlnP [Eremococcus coleocola ACS-139-V-Col8] Length = 218 Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 52/153 (33%), Positives = 81/153 (52%), Gaps = 24/153 (15%) Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273 T + LPLL I F F LP I +++ + + STV+ A+ Sbjct: 60 DTIRNLPLLLIIFFTYFALPQ---IGIRFSVFW-------------STVA--------AM 95 Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333 S + + ++EI+RSGL +P+GQ EA A GLT + L+LLPQA+R++I + SQ + Sbjct: 96 SLFESCMVSEIIRSGLKGLPKGQAEAGYAAGLTTWQVLSLILLPQAVRNMITSIISQLIA 155 Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 L+K++SLA + +++ I NQ AI I Sbjct: 156 LIKDTSLATIIALPEIMHNAKIIYNQDVSAIII 188 >gi|218510008|ref|ZP_03507886.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium etli Brasil 5] Length = 225 Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 59/206 (28%), Positives = 111/206 (53%), Gaps = 20/206 (9%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF---GLPTLVLIALKYQLHFD 247 + SF G++L L T ++R F G A P++ ++ F ++ G P LV + + + + Sbjct: 27 LLSFTFGLILGL-VTAIARLF----GPA-PVVVVARFYVWVIRGTPLLVQL---FVIFYG 77 Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307 P +G + F + I + A+ +EI+R+ + +VP+GQ EAA ++G++ Sbjct: 78 LPSIG--------ILLDAFPAALIGFTLNIGAYSSEIIRAVISSVPKGQWEAAYSIGMSW 129 Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367 R+A +LPQA R +PPL++ +++L+K++SLA A+ +L I+ T + + + Sbjct: 130 RQAMSRTILPQAGRVAVPPLSNTFISLVKDTSLAAAITVPELFQAAQRIVATTYEPLILY 189 Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIA 393 + IYL LS +++ RL + A Sbjct: 190 IEAALIYLVLSSILSQLQVRLERRFA 215 >gi|148239751|ref|YP_001225138.1| ABC-type amino acid transport system permease component [Synechococcus sp. WH 7803] gi|147848290|emb|CAK23841.1| ABC-type amino acid transport system permease component [Synechococcus sp. WH 7803] Length = 328 Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 45/124 (36%), Positives = 72/124 (58%), Gaps = 3/124 (2%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +A + AA++AE VR GL AVP Q EAA ALGL + RLV+LPQA+R +P LT+Q Sbjct: 194 VAFGLFAAAYVAEDVRGGLQAVPPTQSEAAAALGLGPWQIQRLVILPQALRIAVPALTNQ 253 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQT---GQAIEIILIWMFIYLSLSIMIALFMNR 387 + LL+N+SL +G +L+ + +++ G+ +E+ + +Y L +AL + Sbjct: 254 AVGLLQNTSLMAILGLVELLGISQSLLANPAYIGRHLEVYVWLAALYWLLCTAMALMARQ 313 Query: 388 LNAK 391 + Sbjct: 314 FERQ 317 >gi|330823280|ref|YP_004386583.1| polar amino acid ABC transporter inner membrane subunit [Alicycliphilus denitrificans K601] gi|329308652|gb|AEB83067.1| polar amino acid ABC transporter, inner membrane subunit [Alicycliphilus denitrificans K601] Length = 223 Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 43/127 (33%), Positives = 75/127 (59%) Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327 S I + AA+ +EI+R+G+ +VPRGQ+ A ALG+T+ + +LV+LPQA R+++P L Sbjct: 95 SAIITFVAFEAAYFSEIMRAGIQSVPRGQVFAGQALGMTYSQNMKLVVLPQAFRNMLPVL 154 Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387 +Q + L +++SL A+G D++ G+ +E L Y + ++ + R Sbjct: 155 LTQTIILFQDTSLVYAIGAYDMLKGFDVAGKNFGRPVEAYLAAAVAYFVICYSLSWAVKR 214 Query: 388 LNAKIAL 394 L+ KIA+ Sbjct: 215 LHKKIAI 221 >gi|308172227|ref|YP_003918932.1| amino acid ABC transporter permease [Bacillus amyloliquefaciens DSM 7] gi|307605091|emb|CBI41462.1| similar to amino acid ABC transporter (permease) [Bacillus amyloliquefaciens DSM 7] Length = 216 Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 66/214 (30%), Positives = 111/214 (51%), Gaps = 17/214 (7%) Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239 TL M A VF+ + G++L+L H+ L +YIS F G+PTLV + Sbjct: 15 TLVMAVAA--MVFAVIGGLILALITKNRIPVLHQ-----LSKVYISFFR--GVPTLVQLF 65 Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299 L Y + P L F G S ++ + I LS AA++AEI R+ L +V GQ+EA Sbjct: 66 LIY---YGLPQL----FPGMSKMT-ALTAAIIGLSLKNAAYLAEIFRAALNSVDEGQLEA 117 Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359 +++G+T +A R ++ PQA+R+ +P + ++ LLK +SLA +G ++ + G + Sbjct: 118 CLSVGMTKSQAYRRIIFPQAIRNALPATGNTFIGLLKETSLAFTLGVMEMFAQGKMYASG 177 Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393 + E L +Y L+I+ ++ + L I+ Sbjct: 178 NLKYFETYLAVAIMYWILTIIYSVLQDLLERAIS 211 >gi|256157635|ref|ZP_05455553.1| amino acid ABC transporter, permease protein [Brucella ceti M490/95/1] gi|256253390|ref|ZP_05458926.1| amino acid ABC transporter, permease protein [Brucella ceti B1/94] Length = 226 Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 40/126 (31%), Positives = 77/126 (61%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + I + A+ +EI+R+ + +VP+GQ EAA ++G++ R+A +LPQA R+ +P Sbjct: 89 FPAALIGFTLNIGAYSSEIIRAVISSVPKGQWEAAYSIGMSWRQALIRTILPQATRTAVP 148 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PL++ +++L+K++SLA A+ +L I+ T + + + + IYL+LS +++ Sbjct: 149 PLSNTFISLIKDTSLAAAITVPELFQSAQRIVATTYEPLILYIEAALIYLALSSILSALQ 208 Query: 386 NRLNAK 391 RL + Sbjct: 209 VRLERR 214 >gi|229154119|ref|ZP_04282244.1| Amino acid ABC transproter, permease [Bacillus cereus ATCC 4342] gi|228629399|gb|EEK86101.1| Amino acid ABC transproter, permease [Bacillus cereus ATCC 4342] Length = 230 Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 47/126 (37%), Positives = 74/126 (58%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IAL+ + A+I EI R + ++ RGQ+EAA +LG+ + A R ++LPQA R +PPL +Q Sbjct: 89 IALAIHNGAYITEIFRGSIQSIDRGQLEAARSLGMPYPLAMRRIVLPQAFRQSLPPLGNQ 148 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++ LK+SSL VG ++L G +I Q +E +I YL L ++ +N L Sbjct: 149 FIIGLKDSSLVAYVGMSELWGSGLSIAAGNFQQLETYMIVGLYYLVLVLLFTYLVNLLEK 208 Query: 391 KIALKE 396 ++ KE Sbjct: 209 RLQRKE 214 >gi|227833204|ref|YP_002834911.1| putative ABC transport system, permease protein [Corynebacterium aurimucosum ATCC 700975] gi|227454220|gb|ACP32973.1| putative ABC transport system, permease protein [Corynebacterium aurimucosum ATCC 700975] Length = 292 Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 48/130 (36%), Positives = 75/130 (57%), Gaps = 4/130 (3%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + L AA++AEIVRSG+ +VP GQ EA+ ALG+ R +LPQAMR IIPP ++ Sbjct: 135 LGLGLNEAAYMAEIVRSGISSVPEGQKEASKALGMGWWMTMRRTVLPQAMRIIIPPTGNE 194 Query: 331 YLNLLKNSSLAVAVGF-ADLVSVGGTIINQTGQAIEIILI---WMFIYLSLSIMIALFMN 386 +++LLK SSL VA+ + A++ I + I ++++ W SL ++ F+ Sbjct: 195 FISLLKTSSLVVAIPYTAEIFGRATDISAALFEPIPLLMVAATWYLAITSLLMVGQYFLE 254 Query: 387 RLNAKIALKE 396 R + A +E Sbjct: 255 RRFERGATRE 264 >gi|227821878|ref|YP_002825848.1| putative amino acid ABC transporter, permease protein [Sinorhizobium fredii NGR234] gi|227340877|gb|ACP25095.1| putative amino acid ABC transporter, permease protein [Sinorhizobium fredii NGR234] Length = 384 Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 33/88 (37%), Positives = 61/88 (69%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 +F+ I +S + +A++AE+VR GL A+P+GQ E A +LGL++ + L++LPQA++ +I Sbjct: 247 KFLRALIGVSFFASAYMAEVVRGGLQAIPKGQYEGADSLGLSYWQKMNLIVLPQALKLVI 306 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSV 352 P + + ++ L K++SL +G DL+ + Sbjct: 307 PGIVNTFIGLFKDTSLVSIIGMFDLLGI 334 >gi|187934602|ref|YP_001885296.1| glutamine ABC transporter, permease/substrate-binding protein [Clostridium botulinum B str. Eklund 17B] gi|187722755|gb|ACD23976.1| glutamine ABC transporter, permease/substrate-binding protein [Clostridium botulinum B str. Eklund 17B] Length = 213 Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 56/194 (28%), Positives = 93/194 (47%), Gaps = 30/194 (15%) Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPT 234 +T++ + S LGIV++L T + TG + PLL + FGLPT Sbjct: 17 VTLEVFVLTLILSIPLGIVVALARTSKILMLRKLTGIYVLIMRGTPLLLQIVVIFFGLPT 76 Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294 + + FD+ F + +A AA+ EI RSG+I++ + Sbjct: 77 M-------GITFDR-----------------FTAAILAFVLNYAAYFGEIFRSGIISIDK 112 Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354 GQ EAA LGLT + ++LPQA++ +IPP+ ++ L+K++SL +G +L+ + Sbjct: 113 GQYEAAEMLGLTSKDTFFRIILPQAIKRVIPPVANEITTLIKDTSLVYIIGLDELLKIAK 172 Query: 355 TIINQTGQAIEIIL 368 N+ I +IL Sbjct: 173 IASNRDVTLIPLIL 186 >gi|332088978|gb|EGI94090.1| glutamine transport system permease protein glnP domain protein [Shigella boydii 5216-82] Length = 140 Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 40/129 (31%), Positives = 78/129 (60%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + + + + A+IAEI R ++++ +G EA +ALGL+ + R V+LP A+R ++P Sbjct: 11 FTAAVVTIMINSGAYIAEITRGAVLSIHKGFREAGLALGLSRWETIRYVILPLALRRMLP 70 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PL +Q++ +K++SL + +G A+L G II +A+EI YL ++++++ + Sbjct: 71 PLGNQWIISIKDTSLFIVIGVAELTRQGQEIIAGNFRALEIWSAVAVFYLIITLVLSFIL 130 Query: 386 NRLNAKIAL 394 RL ++ + Sbjct: 131 RRLERRMKI 139 >gi|271501471|ref|YP_003334497.1| polar amino acid ABC transporter inner membrane subunit [Dickeya dadantii Ech586] gi|270345026|gb|ACZ77791.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya dadantii Ech586] Length = 238 Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 68/200 (34%), Positives = 107/200 (53%), Gaps = 19/200 (9%) Query: 189 IFVFSFVLGIVLS--LFATRLSRHFHEKTGKALPLLYISTFLIF-GLPTLVLIALKYQLH 245 +F SFV+G LS L A R+S +G A LY+ LIF G P L+ + L Y Sbjct: 24 LFFSSFVVGAALSVLLVAMRVS-AIWPLSGFAR--LYM---LIFRGTPLLIQLFLVYY-- 75 Query: 246 FDKPVLGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301 LGQF+ + S P F +AL+ TA + AEI+R L++VP GQ+EA + Sbjct: 76 ----GLGQFSVVRDSLFWPVLRDPFSCAVMALALCTAGYTAEILRGALLSVPAGQIEAGL 131 Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361 A G++ R ++ P A+R +P +++ + L+K+++LA V D+ V II +T Sbjct: 132 ACGMSRWLLLRRIIAPVALRHALPAWSTEAILLIKSTALASLVTVWDITGVAQQIIQRTY 191 Query: 362 QAIEIILIWMFIYLSLSIMI 381 + +E+ + IYL L+ +I Sbjct: 192 RTLEVFVCAALIYLLLNFII 211 >gi|323339297|ref|ZP_08079587.1| glutamate ABC superfamily ATP binding cassette transporter permease protein [Lactobacillus ruminis ATCC 25644] gi|323093281|gb|EFZ35863.1| glutamate ABC superfamily ATP binding cassette transporter permease protein [Lactobacillus ruminis ATCC 25644] Length = 228 Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 40/125 (32%), Positives = 76/125 (60%), Gaps = 4/125 (3%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IAL + A+ AEI RSG+I++P+GQ EA ++LG+T ++LPQA+R+ +P + ++ Sbjct: 99 IALGLNSGAYTAEIFRSGIISIPKGQTEAGLSLGMTRHMVMFEIVLPQAVRNALPAMGNE 158 Query: 331 YLNLLKNSSLAVAVGFADLVS----VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386 +++L+K SS+ +G ++ + VGGT+ + I ++ + +LS +I F Sbjct: 159 FISLIKESSVLFYIGVQEVTAQALGVGGTLYDFVPPLIVAAAVYFVLTFTLSWIIGYFEK 218 Query: 387 RLNAK 391 +++ K Sbjct: 219 KMSRK 223 Score = 38.1 bits (87), Expect = 2.3, Method: Compositional matrix adjust. Identities = 16/42 (38%), Positives = 26/42 (61%) Query: 118 RLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIP 159 R+S NK++ I RVY+ + R P ++ + +Y S+ VL IP Sbjct: 41 RISDNKILETISRVYISIVRGTPSMIQVMLIYYSLSKVLSIP 82 >gi|239818200|ref|YP_002947110.1| polar amino acid ABC transporter inner membrane protein [Variovorax paradoxus S110] gi|239804777|gb|ACS21844.1| polar amino acid ABC transporter, inner membrane subunit [Variovorax paradoxus S110] Length = 226 Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 66/212 (31%), Positives = 106/212 (50%), Gaps = 22/212 (10%) Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALK 241 TM A V G+VL+ A RLS + A P L++ F P + Sbjct: 24 TMKIAAVAIALGVVFGVVLA--ALRLS----GRAWLARPALWVIEFYRNTPPLVHFFWAF 77 Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301 Y L PVL G ++ P + + IALS + AF AE+ R GL+++ RGQ EAA Sbjct: 78 YAL----PVLI------GVSLDP-YAAAVIALSTQSGAFFAEVFRGGLVSIERGQWEAAR 126 Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361 A+G+ +A R V+LPQA+ ++PP + L+K ++LA + ++DL+ + + T Sbjct: 127 AVGMRSHQALRRVVLPQALARMLPPFIERSFELIKTTALASTLAYSDLLYQAMQLNSITF 186 Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393 + +E+ + I+ +ALF L A++A Sbjct: 187 RPLEVYTVVAAIFF-----LALFSLSLVARVA 213 >gi|326560584|gb|EGE10965.1| octopine transport system permease protein OccM [Moraxella catarrhalis 103P14B1] gi|326565590|gb|EGE15753.1| octopine transport system permease protein OccM [Moraxella catarrhalis 12P80B1] gi|326568464|gb|EGE18544.1| octopine transport system permease protein OccM [Moraxella catarrhalis BC7] gi|326573965|gb|EGE23915.1| octopine transport system permease protein OccM [Moraxella catarrhalis O35E] Length = 241 Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 56/186 (30%), Positives = 95/186 (51%), Gaps = 13/186 (6%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQF-----NFIGGSTVSPEFMSLYI 271 +A+P YI F G P LV I L Y LGQF +F+ S + I Sbjct: 52 RAIPATYI--FFFRGTPLLVQIFLIYY------GLGQFTALKESFLWDPIFSQAYWCAII 103 Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 A + T+A+I EIVR ++AVP G++EAA A+G++ ++ V+LP+A +IP +++ Sbjct: 104 AFTLNTSAYIGEIVRGAVMAVPTGELEAADAIGMSKQQKLHRVILPRAFGIMIPAYSNEV 163 Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 + +LK S+LA ++ +L II+ T +E+ IYL +S + + + Sbjct: 164 IFMLKGSALAASITVVELTHKARDIISITYLHLEMFFAAGVIYLVISWVFLFIFRQFEHR 223 Query: 392 IALKEK 397 + ++ Sbjct: 224 VNRHKR 229 >gi|315653694|ref|ZP_07906614.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus iners ATCC 55195] gi|315489056|gb|EFU78698.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus iners ATCC 55195] Length = 498 Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 64/210 (30%), Positives = 110/210 (52%), Gaps = 28/210 (13%) Query: 189 IFVFSFVLGIVLS--LFATRLSRHFHEKTGKALP-LLYISTFLIFGLPTLVLIALKYQLH 245 I +FS ++G++L L RLS H K +P + YI LI G P +V I Y Sbjct: 305 ITIFSVLIGVILGTILALMRLSSHLALK----IPAICYIE--LIRGTPQMVQILFVY--- 355 Query: 246 FDKPVLGQFNFIGGSTVS--PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 F G+ + ++ IA+ + A++AE +RSG+ ++P GQ EAA +L Sbjct: 356 ----------FGIGAIIQNMSALLAGIIAIGLNSGAYVAEDIRSGINSLPVGQAEAARSL 405 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363 GL+ R V++PQA+++I P L ++++ LLK+SSL +G A+ + + T Q Sbjct: 406 GLSKAATYRYVVIPQAIKNIWPALGNEFITLLKDSSLVSIIGVAETMYQTQLVQTSTYQG 465 Query: 364 IEIILIWMFIY----LSLSIMIALFMNRLN 389 + +++ M IY +L+ +++ R+N Sbjct: 466 VFPLVVAMAIYFIMTFTLTRILSYMERRMN 495 >gi|301793689|emb|CBW36075.1| glutamine ABC transporter, glutamine-binding protein/permease protein [Streptococcus pneumoniae INV104] Length = 521 Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 39/109 (35%), Positives = 65/109 (59%) Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 +S T A++ EIVR G++AV +GQ EAA ALG+TH + R + LPQ +R+I+P ++++ Sbjct: 384 VSINTGAYMTEIVRGGILAVDKGQFEAATALGMTHNQTMRKIALPQVVRNILPATGNEFV 443 Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 +K++S+ + +L G T+ QT Q + I IY L+ + Sbjct: 444 INIKDTSVLNVISVVELYFSGNTVATQTYQYFQTFTIIAVIYFVLTFTV 492 >gi|226361360|ref|YP_002779138.1| ABC transporter permease protein [Rhodococcus opacus B4] gi|226239845|dbj|BAH50193.1| putative ABC transporter permease protein [Rhodococcus opacus B4] Length = 330 Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 61/198 (30%), Positives = 104/198 (52%), Gaps = 10/198 (5%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF----LIFGLPTLVLIALKYQ-LH 245 V F LG+VL++ +RLS H + + +YI F LI L I YQ L Sbjct: 93 VLGFALGVVLAV--SRLS---HNPVLQVIAWVYIWAFRSIPLIVQLLFWFNITYLYQTLS 147 Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305 P F + V F + I L+ + AA+ AEI+RSG+I+V GQ+EAA +LG+ Sbjct: 148 LGIPFGPAFFTFEVNGVISGFTAAVIGLALHQAAYSAEIIRSGIISVDHGQIEAAQSLGI 207 Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365 R+ ++LPQAMR I+P ++ ++L K +S+ + A+L I + G+ + Sbjct: 208 PRRRQFFKIVLPQAMRGILPNAANEVISLFKGTSIVSTMAIAELFYQVQVIFGRNGRVVP 267 Query: 366 IILIWMFIYLSLSIMIAL 383 ++++ Y+ L+ ++++ Sbjct: 268 LLMVATIWYIILTTLLSI 285 >gi|125718886|ref|YP_001036019.1| ABC-type arginine/histidine transporter, permease protein, putative [Streptococcus sanguinis SK36] gi|125498803|gb|ABN45469.1| ABC-type arginine/histidine transporter, permease protein, putative [Streptococcus sanguinis SK36] gi|325688945|gb|EGD30953.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK115] Length = 230 Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 40/122 (32%), Positives = 74/122 (60%), Gaps = 2/122 (1%) Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 AA IAE+ ++ +AVP+GQ EA +++GLT + ++LPQA R +P LT+ +LNL+++ Sbjct: 109 AAMIAEVFKAAYLAVPKGQTEAGLSIGLTPVQTFLRIILPQAFRIALPNLTTSFLNLMRD 168 Query: 338 SSLAVAVGFADLVSVGGTII--NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395 ++LA +G D++ G +I N ++E IY ++++++L L + +K Sbjct: 169 AALAYTIGAVDVMGAGQNLISRNLGNYSLETYTAVALIYWGIALVVSLASQLLEKSLTVK 228 Query: 396 EK 397 E+ Sbjct: 229 ER 230 >gi|62317471|ref|YP_223324.1| amino acid ABC transporter permease [Brucella abortus bv. 1 str. 9-941] gi|83269452|ref|YP_418743.1| binding-protein dependent transport system inner membrane protein [Brucella melitensis biovar Abortus 2308] gi|254690968|ref|ZP_05154222.1| Cystine transport system permease protein [Brucella abortus bv. 6 str. 870] gi|254695721|ref|ZP_05157549.1| Cystine transport system permease protein [Brucella abortus bv. 3 str. Tulya] gi|254698752|ref|ZP_05160580.1| Cystine transport system permease protein [Brucella abortus bv. 2 str. 86/8/59] gi|254732196|ref|ZP_05190774.1| Cystine transport system permease protein [Brucella abortus bv. 4 str. 292] gi|256256153|ref|ZP_05461689.1| Cystine transport system permease protein [Brucella abortus bv. 9 str. C68] gi|260544708|ref|ZP_05820529.1| cystine transport system permease [Brucella abortus NCTC 8038] gi|260759992|ref|ZP_05872340.1| polar amino acid ABC transporter [Brucella abortus bv. 4 str. 292] gi|62197664|gb|AAX75963.1| amino acid ABC transporter, permease protein [Brucella abortus bv. 1 str. 9-941] gi|82939726|emb|CAJ12723.1| Binding-protein-dependent transport systems inner membrane component [Brucella melitensis biovar Abortus 2308] gi|260097979|gb|EEW81853.1| cystine transport system permease [Brucella abortus NCTC 8038] gi|260670310|gb|EEX57250.1| polar amino acid ABC transporter [Brucella abortus bv. 4 str. 292] Length = 226 Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 40/126 (31%), Positives = 77/126 (61%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + I + A+ +EI+R+ + +VP+GQ EAA ++G++ R+A +LPQA R+ +P Sbjct: 89 FPAALIGFTLNIGAYSSEIIRTVISSVPKGQWEAAYSIGMSWRQALIRTILPQATRTAVP 148 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PL++ +++L+K++SLA A+ +L I+ T + + + + IYL+LS +++ Sbjct: 149 PLSNTFISLIKDTSLAAAITVPELFQSAQRIVATTYEPLILYIEAALIYLALSSILSALQ 208 Query: 386 NRLNAK 391 RL + Sbjct: 209 VRLERR 214 >gi|328958153|ref|YP_004375539.1| glutamine-binding periplasmic protein [Carnobacterium sp. 17-4] gi|328674477|gb|AEB30523.1| glutamine-binding periplasmic protein [Carnobacterium sp. 17-4] Length = 485 Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 50/177 (28%), Positives = 91/177 (51%), Gaps = 29/177 (16%) Query: 190 FVFSFVLGIVLSLFATRLSR------HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243 F + V G++L LF+ ++ + + +PL+ ++ F+ F +P + I L Sbjct: 297 FAIALVAGVILGLFSATSNKLLIGISSIYVTIMRGIPLIVLAFFVYFSIPQFLNIQLS-- 354 Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 +++ I LS T A+I+E+VR G+ AV GQ+EAA +L Sbjct: 355 ---------------------AYVAGIITLSLNTTAYISELVRGGIQAVAVGQLEAARSL 393 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 GL ++ + R ++LPQA++ +IP +Q++ LK++S+ +G +L G II +T Sbjct: 394 GLPYQTSMRKIILPQAIKIMIPSFINQFVITLKDTSILSVIGIVELTQTGKIIIART 450 >gi|307702517|ref|ZP_07639471.1| bacterial extracellular solute-binding protein, family 3 [Streptococcus oralis ATCC 35037] gi|307623929|gb|EFO02912.1| bacterial extracellular solute-binding protein, family 3 [Streptococcus oralis ATCC 35037] Length = 521 Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 39/109 (35%), Positives = 66/109 (60%) Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 +S T A++ EIVR G++AV +GQ EAA ALG+TH + R ++LPQ +R+I+P ++++ Sbjct: 383 VSINTGAYMTEIVRGGILAVDKGQFEAATALGMTHNQTMRKIVLPQVVRNILPATGNEFV 442 Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 +K++S+ + +L G T+ QT Q + I IY L+ + Sbjct: 443 INIKDTSVLNVISVVELYFSGNTVATQTYQYFQTFTIIAVIYFVLTFTV 491 >gi|259501631|ref|ZP_05744533.1| glutamine ABC superfamily ATP binding cassette transporter, permease protein [Lactobacillus iners DSM 13335] gi|259166916|gb|EEW51411.1| glutamine ABC superfamily ATP binding cassette transporter, permease protein [Lactobacillus iners DSM 13335] Length = 498 Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 64/210 (30%), Positives = 110/210 (52%), Gaps = 28/210 (13%) Query: 189 IFVFSFVLGIVLS--LFATRLSRHFHEKTGKALP-LLYISTFLIFGLPTLVLIALKYQLH 245 I +FS ++G++L L RLS H K +P + YI LI G P +V I Y Sbjct: 305 ITIFSVLIGVILGTILALMRLSSHLALK----IPAICYIE--LIRGTPQMVQILFVY--- 355 Query: 246 FDKPVLGQFNFIGGSTVS--PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 F G+ + ++ IA+ + A++AE +RSG+ ++P GQ EAA +L Sbjct: 356 ----------FGIGAIIQNMSALLAGIIAIGLNSGAYVAEDIRSGINSLPVGQAEAARSL 405 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363 GL+ R V++PQA+++I P L ++++ LLK+SSL +G A+ + + T Q Sbjct: 406 GLSKAATYRYVVIPQAIKNIWPALGNEFITLLKDSSLVSIIGVAETMYQTQLVQTSTYQG 465 Query: 364 IEIILIWMFIY----LSLSIMIALFMNRLN 389 + +++ M IY +L+ +++ R+N Sbjct: 466 VFPLVVAMAIYFIMTFTLTRILSYMERRMN 495 >gi|306840653|ref|ZP_07473405.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Brucella sp. BO2] gi|306289391|gb|EFM60627.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Brucella sp. BO2] Length = 207 Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 40/126 (31%), Positives = 77/126 (61%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + I + A+ +EI+R+ + +VP+GQ EAA ++G++ R+A +LPQA R+ +P Sbjct: 70 FPAALIGFTLNIGAYSSEIIRAVISSVPKGQWEAAYSIGMSWRQALIRTILPQATRTAVP 129 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PL++ +++L+K++SLA A+ +L I+ T + + + + IYL+LS +++ Sbjct: 130 PLSNTFISLVKDTSLAAAITVPELFQSAQRIVATTYEPLILYIEAALIYLALSSILSALQ 189 Query: 386 NRLNAK 391 RL + Sbjct: 190 VRLERR 195 >gi|311111808|ref|YP_003983030.1| glutamine ABC transporter permease [Rothia dentocariosa ATCC 17931] gi|310943302|gb|ADP39596.1| glutamine ABC superfamily ATP binding cassette transporter, permease protein [Rothia dentocariosa ATCC 17931] Length = 311 Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 38/115 (33%), Positives = 74/115 (64%), Gaps = 2/115 (1%) Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 L +F++I S + F+++ I L+ Y + IAE++RSG+ +PRGQ EA +A+GLT + Sbjct: 136 LSRFSWINPSQL--PFLAVVIGLTFYNGSVIAELLRSGVKQLPRGQGEAGLAIGLTPGQT 193 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365 R +L+PQA +++P + SQ++ +LK+++L + + +L++ I + G ++ Sbjct: 194 LRTILMPQAFNAMMPSMLSQFVVILKDTALGYIISYPELLASARRIGSGDGNVLQ 248 >gi|294853534|ref|ZP_06794206.1| polar amino acid transport system permease [Brucella sp. NVSL 07-0026] gi|294819189|gb|EFG36189.1| polar amino acid transport system permease [Brucella sp. NVSL 07-0026] Length = 252 Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 38/113 (33%), Positives = 73/113 (64%) Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338 A+ +EI+R+ + +VP+GQ EAA ++G++ R+A +LPQA R+ +PPL++ +++L+K++ Sbjct: 128 AYSSEIIRAVISSVPKGQWEAAYSIGMSWRQALIRTILPQATRTAVPPLSNTFISLIKDT 187 Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 SLA A+ +L I+ T + + + + IYL+LS +++ RL + Sbjct: 188 SLAAAITVPELFQSAQRIVATTYEPLILYIEAALIYLALSSILSALQVRLERR 240 >gi|283457453|ref|YP_003362030.1| amino acid ABC transporter permease [Rothia mucilaginosa DY-18] gi|283133445|dbj|BAI64210.1| ABC-type amino acid transport system, permease component [Rothia mucilaginosa DY-18] Length = 267 Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 34/75 (45%), Positives = 58/75 (77%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 ++L +AA+I+E++R+GL A+P+GQMEAA +LG++H +A +++PQA R ++PPLT++ Sbjct: 136 LSLGMVSAAYISEVLRAGLQAIPKGQMEAARSLGMSHTRAMISIIIPQAFRVVLPPLTNE 195 Query: 331 YLNLLKNSSLAVAVG 345 + L K+SSL +G Sbjct: 196 VILLTKDSSLVYLLG 210 >gi|261318648|ref|ZP_05957845.1| polar amino acid ABC transporter [Brucella pinnipedialis B2/94] gi|265986447|ref|ZP_06099004.1| amino acid ABC transporter permease [Brucella pinnipedialis M292/94/1] gi|261297871|gb|EEY01368.1| polar amino acid ABC transporter [Brucella pinnipedialis B2/94] gi|264658644|gb|EEZ28905.1| amino acid ABC transporter permease [Brucella pinnipedialis M292/94/1] Length = 254 Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 40/126 (31%), Positives = 77/126 (61%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + I + A+ +EI+R+ + +VP+GQ EAA ++G++ R+A +LPQA R+ +P Sbjct: 117 FPAALIGFTLNIGAYSSEIIRAVISSVPKGQWEAAYSIGMSWRQALIRTILPQATRTAVP 176 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PL++ +++L+K++SLA A+ +L I+ T + + + + IYL+LS +++ Sbjct: 177 PLSNTFISLIKDTSLAAAITVPELFQSAQRIVATTYEPLILYIEAALIYLALSSILSALQ 236 Query: 386 NRLNAK 391 RL + Sbjct: 237 VRLERR 242 >gi|238759570|ref|ZP_04620732.1| ABC-type amino acid transport system permease component [Yersinia aldovae ATCC 35236] gi|238702229|gb|EEP94784.1| ABC-type amino acid transport system permease component [Yersinia aldovae ATCC 35236] Length = 251 Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 41/134 (30%), Positives = 78/134 (58%), Gaps = 1/134 (0%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 PE ++ AL+ +A++A V++G+IA+ GQ +A ++LG + V+LPQA+R + Sbjct: 94 PEITTVVCALALIASAYLAHAVKAGIIAIGAGQWQAGLSLGFNRWQVLWFVVLPQALRMM 153 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG-QAIEIILIWMFIYLSLSIMIA 382 +P +Q+++L+K++SLA VG +L + + N++ +E+ L +Y L + + Sbjct: 154 VPSFINQWISLIKDTSLAYIVGVNELTFLATQVNNRSMVYPMEVFLFVALVYFVLCLTLD 213 Query: 383 LFMNRLNAKIALKE 396 L N LN + + K Sbjct: 214 LLANGLNRRFSPKN 227 >gi|297191654|ref|ZP_06909052.1| glutamate transporter permease [Streptomyces pristinaespiralis ATCC 25486] gi|197721588|gb|EDY65496.1| glutamate transporter permease [Streptomyces pristinaespiralis ATCC 25486] Length = 222 Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 48/125 (38%), Positives = 76/125 (60%) Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 L+ YTAAF+ E VRSG+ VP GQ EAA A+GL+ + V+LPQA RS++ PLT+ Sbjct: 98 GLAAYTAAFVCEAVRSGINTVPVGQAEAARAIGLSFTQVLSHVVLPQAFRSVVGPLTNVL 157 Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 + L KN+++A A+G A+ V +I Q + I I+ F ++ L++ L + + + Sbjct: 158 IALTKNTTVAAAIGVAEAALVMKEMIENEAQLVLISAIFAFGFVVLTLPTGLILGWVGKR 217 Query: 392 IALKE 396 +A+K Sbjct: 218 VAVKR 222 >gi|300214383|gb|ADJ78799.1| Glutamine-binding protein / Glutamine transport system permease protein [Lactobacillus salivarius CECT 5713] Length = 485 Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 50/157 (31%), Positives = 81/157 (51%), Gaps = 26/157 (16%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 + LPLL ++ F+ G+P+L GS + P F++ I L+ Sbjct: 331 RGLPLLVLALFIYNGIPSLT----------------------GSKI-PAFIAGIITLTLN 367 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 A+ A V+ G+ AV +GQMEAA +LGL+ K+ R V+LPQ ++ +IP +Q++ LK Sbjct: 368 EGAYTAAFVKGGIEAVDKGQMEAARSLGLSFGKSMRKVILPQGVKIMIPSFINQFIITLK 427 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI 373 ++S+ +G +L G II + +E IW I Sbjct: 428 DTSILSIIGILELTQTGKIIIARN---LEGFRIWGII 461 Score = 42.0 bits (97), Expect = 0.19, Method: Compositional matrix adjust. Identities = 25/68 (36%), Positives = 35/68 (51%) Query: 88 AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147 A L G V T L G+I ATI G L+G + NK I + +FR +P LV+ F Sbjct: 282 AFLDGIVETLKLTVVGIIGATIFGILIGMLGVVPNKFAQGISTTIIYIFRGLPLLVLALF 341 Query: 148 LYKSVLSV 155 +Y + S+ Sbjct: 342 IYNGIPSL 349 >gi|229587810|ref|YP_002869929.1| putative ABC transporter permease [Pseudomonas fluorescens SBW25] gi|229359676|emb|CAY46524.1| putative ABC transport system, permease [Pseudomonas fluorescens SBW25] Length = 221 Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 64/202 (31%), Positives = 105/202 (51%), Gaps = 20/202 (9%) Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251 F VLG L+L RLSR K + +Y+S F G P LV + L Y + P + Sbjct: 32 FGLVLGFGLALM--RLSRF---KLVSWIARVYVSFFR--GTPLLVQLFLIY---YGLPQV 81 Query: 252 G-QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 G + + I P M I S AA+ EI+R+ + ++ RGQ EAA ++G+T + Sbjct: 82 GIELDPI------PAAM---IGFSLNMAAYACEILRAAIASIERGQWEAAASIGMTRAQT 132 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370 R +LPQAMR+ +PPL + +++L+K+++LA + +L + +T + + L Sbjct: 133 LRRAILPQAMRTALPPLGNSFISLVKDTALAATIQVPELFRQAQLVSARTFEIFTMYLSA 192 Query: 371 MFIYLSLSIMIALFMNRLNAKI 392 IY L+ ++A NRL ++ Sbjct: 193 ALIYWILASILAHLQNRLEDRV 214 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 33/97 (34%), Positives = 47/97 (48%), Gaps = 13/97 (13%) Query: 67 RAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVA 126 AGF++ P+ +Y T IL + GM ++G + RLS KLV+ Sbjct: 2 EAGFQLALDSAPFLLKGAYYTVIL---------SLGGMFFGLVLGFGLALMRLSRFKLVS 52 Query: 127 WICRVYVEVFRNIPPLVVIFFLYKSV----LSVLPIP 159 WI RVYV FR P LV +F +Y + + + PIP Sbjct: 53 WIARVYVSFFRGTPLLVQLFLIYYGLPQVGIELDPIP 89 >gi|227890645|ref|ZP_04008450.1| glutamine-binding protein / glutamine transport system permease protein [Lactobacillus salivarius ATCC 11741] gi|227867583|gb|EEJ75004.1| glutamine-binding protein / glutamine transport system permease protein [Lactobacillus salivarius ATCC 11741] Length = 485 Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 50/157 (31%), Positives = 81/157 (51%), Gaps = 26/157 (16%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 + LPLL ++ F+ G+P+L GS + P F++ I L+ Sbjct: 331 RGLPLLVLALFIYNGIPSLT----------------------GSKI-PAFIAGIITLTLN 367 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 A+ A V+ G+ AV +GQMEAA +LGL+ K+ R V+LPQ ++ +IP +Q++ LK Sbjct: 368 EGAYTAAFVKGGIEAVDKGQMEAARSLGLSFGKSMRKVILPQGVKIMIPSFINQFIITLK 427 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI 373 ++S+ +G +L G II + +E IW I Sbjct: 428 DTSILSIIGILELTQTGKIIIARN---LEGFRIWGII 461 Score = 42.0 bits (97), Expect = 0.19, Method: Compositional matrix adjust. Identities = 25/68 (36%), Positives = 35/68 (51%) Query: 88 AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147 A L G V T L G+I ATI G L+G + NK I + +FR +P LV+ F Sbjct: 282 AFLDGIVETLKLTVVGIIGATIFGILIGMLGVVPNKFAQGISTTIIYIFRGLPLLVLALF 341 Query: 148 LYKSVLSV 155 +Y + S+ Sbjct: 342 IYNGIPSL 349 >gi|150398331|ref|YP_001328798.1| polar amino acid ABC transporter inner membrane subunit [Sinorhizobium medicae WSM419] gi|150029846|gb|ABR61963.1| polar amino acid ABC transporter, inner membrane subunit [Sinorhizobium medicae WSM419] Length = 226 Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 57/203 (28%), Positives = 106/203 (52%), Gaps = 14/203 (6%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 + SF LG+ L L T + R F + Y+ ++I G P LV + + + + P Sbjct: 28 LLSFTLGLALGL-VTAVVRLFAPAPFAVVARFYV--WVIRGTPLLVQL---FVIFYGLPS 81 Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 +G + F + I + A+ +EI+R+ + +VPRGQ EAA ++GL+ +A Sbjct: 82 MG--------ILLDAFPAALIGFTLNIGAYSSEIIRAVISSVPRGQWEAAYSIGLSWSQA 133 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370 R +LPQA R +PPL++ +++L+K++SLA A+ +L I+ + + + + + Sbjct: 134 MRRTILPQAGRVAVPPLSNTFISLVKDTSLAAAITVPELFQTAQRIVATSYEPLILYIEA 193 Query: 371 MFIYLSLSIMIALFMNRLNAKIA 393 IYL +S +++ +L + A Sbjct: 194 ALIYLVMSSVLSALQGKLEQRFA 216 >gi|70733753|ref|YP_257393.1| amino acid ABC transporter permease [Pseudomonas fluorescens Pf-5] gi|68348052|gb|AAY95658.1| amino acid ABC transporter, permease protein [Pseudomonas fluorescens Pf-5] Length = 221 Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 40/128 (31%), Positives = 74/128 (57%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I S AA+ EI+R+ + ++ RGQ EAA ++G+T + R +LPQAMR+ +PPL + Sbjct: 93 IGFSLNMAAYACEILRAAIGSIERGQWEAAASIGMTRAQTLRRAILPQAMRTALPPLGNS 152 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 +++L+K+++LA + +L I +T + + L IY L+ ++A NRL Sbjct: 153 FISLVKDTALAATIQVPELFRQAQLITARTFEIFTMYLAAALIYWILASVLAHLQNRLEE 212 Query: 391 KIALKEKK 398 ++ +++ Sbjct: 213 RVNRHDQE 220 Score = 37.7 bits (86), Expect = 2.9, Method: Compositional matrix adjust. Identities = 20/46 (43%), Positives = 27/46 (58%), Gaps = 4/46 (8%) Query: 118 RLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSV----LSVLPIP 159 RLS LV+WI R+YV FR P LV +F +Y + L + P+P Sbjct: 44 RLSHLALVSWIARIYVSFFRGTPLLVQLFVIYYGLPQLGLELDPLP 89 >gi|295095485|emb|CBK84575.1| L-cystine ABC transporter membrane protein/Diaminopimelate ABC transporter membrane protein [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 222 Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 61/207 (29%), Positives = 108/207 (52%), Gaps = 18/207 (8%) Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251 F VLG VL+L R+S + + L YIS F G P LIA + +++ P Sbjct: 32 FGLVLGFVLALM--RMSNIWPVRW---LARFYISVFR--GTP---LIAQLFMIYYGLP-- 79 Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311 QF G + P + I LS TAA+ +E +R+ + ++ +GQ EAA ++G+T + Sbjct: 80 -QF----GIELDP-IPAAMIGLSLNTAAYTSETLRAAISSIDKGQWEAAASIGMTPWQTL 133 Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371 R +LPQA R +PPL++ +++L+K++SLA + +L I ++T + + L Sbjct: 134 RRAILPQAARVALPPLSNSFISLVKDTSLAATIQVPELFRQAQLITSRTLEVFTMYLAAS 193 Query: 372 FIYLSLSIMIALFMNRLNAKIALKEKK 398 IY ++ +++ N ++ +E+ Sbjct: 194 LIYWVMATVLSALQNYFENQLNRQERD 220 Score = 37.7 bits (86), Expect = 2.8, Method: Compositional matrix adjust. Identities = 29/97 (29%), Positives = 46/97 (47%), Gaps = 8/97 (8%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G V T L+ GM ++G ++ R+S V W+ R Y+ VFR P + +F + Sbjct: 15 LLKGAVFTLQLSIGGMFFGLVLGFVLALMRMSNIWPVRWLARFYISVFRGTPLIAQLFMI 74 Query: 149 YKSV----LSVLPIPDHSIVLPFGMFLNNRGLSFPTL 181 Y + + + PIP I G+ LN + TL Sbjct: 75 YYGLPQFGIELDPIPAAMI----GLSLNTAAYTSETL 107 >gi|291569088|dbj|BAI91360.1| putative ABC transporter permease protein [Arthrospira platensis NIES-39] Length = 405 Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 41/113 (36%), Positives = 70/113 (61%), Gaps = 8/113 (7%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + L+ +++A++AE VR GL A+PRGQ EAA ALG+ L++LPQA++ IP + Q Sbjct: 276 VGLTMFSSAYLAENVRGGLQAIPRGQYEAAKALGINAPLTMALIILPQALKISIPSIVGQ 335 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQT---GQAIEI-----ILIWMFIYL 375 +++L ++++L VG +L+ + +I+ G+ E+ IL W+F YL Sbjct: 336 FISLFQDTTLLAIVGLVELLGISRSILANPRFLGRYAEVYLFVGILYWLFCYL 388 >gi|229514448|ref|ZP_04403909.1| amino acid ABC transporter permease protein [Vibrio cholerae TMA 21] gi|229348428|gb|EEO13386.1| amino acid ABC transporter permease protein [Vibrio cholerae TMA 21] Length = 298 Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 44/136 (32%), Positives = 76/136 (55%) Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315 +G + + +S + + ++A+IAEIVR+GL +P+GQ EAA +LGL R V+ Sbjct: 156 LLGPARLWENLLSGVLCIGLLSSAYIAEIVRAGLANIPQGQWEAADSLGLPTWVKYRYVI 215 Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375 PQ + +I P L Q ++L+K++S+ + +L VG I N +G EI LI YL Sbjct: 216 APQVLTAITPALAGQTISLIKDTSIISLISIQELTFVGSEIANSSGLIFEIWLIVGAAYL 275 Query: 376 SLSIMIALFMNRLNAK 391 L + +++ ++ + Sbjct: 276 VLCLSLSMLFKQVERR 291 >gi|218132831|ref|ZP_03461635.1| hypothetical protein BACPEC_00692 [Bacteroides pectinophilus ATCC 43243] gi|217991704|gb|EEC57708.1| hypothetical protein BACPEC_00692 [Bacteroides pectinophilus ATCC 43243] Length = 493 Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 40/133 (30%), Positives = 77/133 (57%), Gaps = 1/133 (0%) Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320 + S F ++ I S AA+ AEI R+G+ AVP GQ EAA LG T + ++ PQ + Sbjct: 359 SYSYRFYAVIIGFSLNYAAYFAEIYRAGIEAVPAGQREAASVLGYTGVQTFTRIVFPQMV 418 Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380 + ++PP+T++ + L+K++SLA A+ + ++ ++ + + + + +F Y+ + + Sbjct: 419 KRVLPPVTNEVITLVKDTSLAFALAYTEMFTLAKQVAAAQASIMPLFVAGLFYYI-FNFV 477 Query: 381 IALFMNRLNAKIA 393 +A FM +L K+ Sbjct: 478 VAWFMEKLELKLG 490 >gi|37678191|ref|NP_932800.1| ABC-type amino acid transport system, permease component [Vibrio vulnificus YJ016] gi|37196930|dbj|BAC92771.1| ABC-type amino acid transport system, permease component [Vibrio vulnificus YJ016] Length = 236 Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 57/171 (33%), Positives = 94/171 (54%), Gaps = 17/171 (9%) Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV-LIAL 240 TM+ VFS VL ++L+ R F L LYIS F G P LV L L Sbjct: 35 TMEMAILGLVFSLVLAVILANI-----RVFRVPILDPLSQLYISFFR--GTPLLVQLFLL 87 Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300 Y L P++ + F + I L+ + AA++AE +R+ +I + R QMEA+ Sbjct: 88 YYGLPQIFPIMVGLD---------AFSAAVIGLTLHFAAYMAESIRAAIIGIDRSQMEAS 138 Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 +++G+T +A R V+LPQA R +P L + +++++K++SLA +G A++++ Sbjct: 139 LSVGMTTSQAMRRVILPQATRVALPSLMNYFIDMIKSTSLAFTLGVAEIMA 189 >gi|301301313|ref|ZP_07207463.1| ABC transporter, permease protein [Lactobacillus salivarius ACS-116-V-Col5a] gi|300851087|gb|EFK78821.1| ABC transporter, permease protein [Lactobacillus salivarius ACS-116-V-Col5a] Length = 485 Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 50/157 (31%), Positives = 81/157 (51%), Gaps = 26/157 (16%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 + LPLL ++ F+ G+P+L GS + P F++ I L+ Sbjct: 331 RGLPLLVLALFIYNGIPSLT----------------------GSKI-PAFIAGIITLTLN 367 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 A+ A V+ G+ AV +GQMEAA +LGL+ K+ R V+LPQ ++ +IP +Q++ LK Sbjct: 368 EGAYTAAFVKGGIEAVDKGQMEAARSLGLSFGKSMRKVILPQGVKIMIPSFINQFIITLK 427 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI 373 ++S+ +G +L G II + +E IW I Sbjct: 428 DTSILSIIGILELTQTGKIIIARN---LEGFRIWGII 461 Score = 41.6 bits (96), Expect = 0.20, Method: Compositional matrix adjust. Identities = 25/68 (36%), Positives = 35/68 (51%) Query: 88 AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147 A L G V T L G+I ATI G L+G + NK I + +FR +P LV+ F Sbjct: 282 AFLDGIVETLKLTVVGIIGATIFGILIGMLGVVPNKFAQGISTTIIYIFRGLPLLVLALF 341 Query: 148 LYKSVLSV 155 +Y + S+ Sbjct: 342 IYNGIPSL 349 >gi|296332695|ref|ZP_06875155.1| putative ABC transporter (permease) [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305673039|ref|YP_003864711.1| putative ABC transporter permease [Bacillus subtilis subsp. spizizenii str. W23] gi|296149975|gb|EFG90864.1| putative ABC transporter (permease) [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305411283|gb|ADM36402.1| putative ABC transporter (permease) [Bacillus subtilis subsp. spizizenii str. W23] Length = 226 Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 59/172 (34%), Positives = 94/172 (54%), Gaps = 13/172 (7%) Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281 LYIS + G+P LV++ + L+F P +G I S V+ I S +AA+I Sbjct: 65 LYIS--FMRGVPILVIL---FILYFGFPYIG----IEFSAVTAAL----IGFSLNSAAYI 111 Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341 AEI RS + +V +GQ EAA +LGL++ + R ++LPQ++R +PPL + L+L+K SSLA Sbjct: 112 AEINRSAISSVEKGQWEAASSLGLSYWQTMRGIILPQSIRIALPPLANVLLDLIKASSLA 171 Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393 + +L+ I + + + ++ IY ++ A F N L K A Sbjct: 172 AMITVPELLQHAKIIGGREFDYMTMYILTALIYWAICSAAAAFQNILEKKYA 223 Score = 40.8 bits (94), Expect = 0.34, Method: Compositional matrix adjust. Identities = 19/61 (31%), Positives = 33/61 (54%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 ++ G T ++F M T+IG + R+S L+ W ++Y+ R +P LV++F L Sbjct: 23 VIKGIGYTLLISFVSMFAGTVIGLFISLARMSQLALLRWPAKLYISFMRGVPILVILFIL 82 Query: 149 Y 149 Y Sbjct: 83 Y 83 >gi|154684862|ref|YP_001420023.1| YxeN [Bacillus amyloliquefaciens FZB42] gi|154350713|gb|ABS72792.1| YxeN [Bacillus amyloliquefaciens FZB42] Length = 224 Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 62/203 (30%), Positives = 107/203 (52%), Gaps = 15/203 (7%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 VF+ + G++L+L H+ L +YIS F G+PTLV + L Y + P Sbjct: 32 VFAVIGGLILALITKNRVPVLHQ-----LSKVYISFFR--GVPTLVQLFLIY---YGLPQ 81 Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 L F G S ++ + I LS AA++AEI R+ L +V GQ+EA +++G+T +A Sbjct: 82 L----FPGMSKMT-ALTAAIIGLSLKNAAYLAEIFRAALNSVDEGQLEACLSVGMTKSQA 136 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370 R ++ PQA+R+ +P + ++ LLK +SLA +G ++ + G + + E L Sbjct: 137 YRRIIFPQAVRNALPATGNTFIGLLKETSLAFTLGVMEMFAQGKMYASGNLKYFETYLAV 196 Query: 371 MFIYLSLSIMIALFMNRLNAKIA 393 +Y L+I+ ++ + L I+ Sbjct: 197 AVMYWILTIIYSVLQDLLERAIS 219 >gi|295426472|ref|ZP_06819122.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus amylolyticus DSM 11664] gi|295063840|gb|EFG54798.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus amylolyticus DSM 11664] Length = 219 Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 61/212 (28%), Positives = 103/212 (48%), Gaps = 31/212 (14%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPTLVLIALKYQL 244 + SFVLG++ L ++ G + LPLL I F FGLP L Sbjct: 32 ILSFVLGLIFGLLRYMKIKYVSAIVGFVIDIIRNLPLLLIIFFTYFGLPEL--------- 82 Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304 V+ + + IAL + A +AEIVRSG+ ++ GQME A + G Sbjct: 83 ---------------GIVTNQTAASIIALVIFEGAMLAEIVRSGISSIDPGQMEGARSNG 127 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ-TGQA 363 +T +A V++PQA+ ++IP L SQ+++L+K++SLA + +L+ I +Q T Sbjct: 128 MTFGQAMYHVVMPQALHNMIPALLSQFVSLVKDTSLATIIVLPELLYHAQIIYSQNTTYI 187 Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395 I + +I +Y + +++F + L + + Sbjct: 188 IPMYVIIAVMYFIVCFCLSMFASYLQKRFKMD 219 >gi|284052501|ref|ZP_06382711.1| polar amino acid ABC transporter, inner membrane subunit [Arthrospira platensis str. Paraca] Length = 405 Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 41/113 (36%), Positives = 70/113 (61%), Gaps = 8/113 (7%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + L+ +++A++AE VR GL A+PRGQ EAA ALG+ L++LPQA++ IP + Q Sbjct: 276 VGLTMFSSAYLAENVRGGLQAIPRGQYEAAKALGINAPLTMALIILPQALKISIPSIVGQ 335 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQT---GQAIEI-----ILIWMFIYL 375 +++L ++++L VG +L+ + +I+ G+ E+ IL W+F YL Sbjct: 336 FISLFQDTTLLAIVGLVELLGISRSILANPRFLGRYAEVYLFVGILYWLFCYL 388 >gi|269796951|ref|YP_003316406.1| amino acid ABC transporter membrane protein [Sanguibacter keddieii DSM 10542] gi|269099136|gb|ACZ23572.1| amino acid ABC transporter membrane protein [Sanguibacter keddieii DSM 10542] Length = 216 Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 64/208 (30%), Positives = 101/208 (48%), Gaps = 30/208 (14%) Query: 192 FSFVLGIVLSLFAT---RLSRHF---HEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH 245 S V G +L+ F R R F + + + PL + F +F LP+L Sbjct: 28 LSLVFGTILAAFRVAPLRSLRTFAGAYVEVARNTPLTLVFIFFVFVLPSL---------G 78 Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305 F P LG+ I IAL+ YT+AF+ E VRSG+ +V GQ EAA A+GL Sbjct: 79 FILP-LGRVPAI-------------IALTAYTSAFVCEAVRSGINSVAVGQAEAARAIGL 124 Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365 + LV+LPQA+R+++PPL + + L KN+S+A +L S + + Sbjct: 125 GTVQTLSLVVLPQALRTVVPPLINVLIALTKNTSVAAGFAVVELTSTSRALARDNPADVV 184 Query: 366 IILIWMFI-YLSLSIMIALFMNRLNAKI 392 ++L + + YL ++I + N + K+ Sbjct: 185 LLLTGIAVCYLVITIPAGIAANAIERKV 212 >gi|229490772|ref|ZP_04384607.1| glutamate transport system permease protein GluC [Rhodococcus erythropolis SK121] gi|229322162|gb|EEN87948.1| glutamate transport system permease protein GluC [Rhodococcus erythropolis SK121] Length = 226 Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 48/129 (37%), Positives = 68/129 (52%), Gaps = 12/129 (9%) Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279 PL I F +FGL + + L D P V F + LS YTAA Sbjct: 62 PLTLILLFCLFGLSQTLGVNLAKS---DSPTF---------LVDNNFRLAVLGLSVYTAA 109 Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339 F+ E +RSG+ VP GQ EA +LGL+ + RL++LPQA R++ PL S + L KNS+ Sbjct: 110 FVCESLRSGINTVPVGQAEAGRSLGLSFAQNLRLIVLPQAFRAVTAPLGSVLIALTKNST 169 Query: 340 LAVAVGFAD 348 +A +G ++ Sbjct: 170 IAAVIGVSE 178 Score = 40.4 bits (93), Expect = 0.46, Method: Compositional matrix adjust. Identities = 26/68 (38%), Positives = 36/68 (52%), Gaps = 1/68 (1%) Query: 83 SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP-P 141 S Y +L F T L F I A IIG L+ A R+S + ++ YV VFRN P Sbjct: 5 SKYGDQLLEAFWTTIQLTFFSAIGAVIIGVLIAAMRVSPVPVARFLGAAYVTVFRNTPLT 64 Query: 142 LVVIFFLY 149 L+++F L+ Sbjct: 65 LILLFCLF 72 >gi|223984172|ref|ZP_03634322.1| hypothetical protein HOLDEFILI_01615 [Holdemania filiformis DSM 12042] gi|223963868|gb|EEF68230.1| hypothetical protein HOLDEFILI_01615 [Holdemania filiformis DSM 12042] Length = 210 Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 65/202 (32%), Positives = 109/202 (53%), Gaps = 15/202 (7%) Query: 194 FVLGIVLSLFATRLSRHFHEKTGKAL-PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252 F + ++LSL L + + +G+AL PL L+ G P L+ + + F P LG Sbjct: 20 FFVTLMLSLPLACLLQALQQFSGRALKPLFRGYITLMRGTPLLLQLMF---IFFGMPYLG 76 Query: 253 QFNFIGGSTVSPEFMSLYIALSC-YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311 T+S E MS+YIA + YTA FI EI+R L AV GQ EA LG + R Sbjct: 77 L-------TLSRE-MSIYIAFTLNYTAYFI-EILRGALSAVDPGQAEAGKMLGFSRRYIY 127 Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371 + LPQA+R+ +P + ++ LNL+K++SL +G ++L+ G + +N A+ + + + Sbjct: 128 FRIQLPQALRTAMPAIGNEVLNLVKDTSLIYVLGASELLKAGRSAVNTYATALPFVFVGI 187 Query: 372 FIYLSLSIMIALFMNRLNAKIA 393 +YL++ + + R+ +I+ Sbjct: 188 -LYLAMCGGFSWILGRIEKRIS 208 >gi|254451516|ref|ZP_05064953.1| ABC-type glutamine transport system, permease component [Octadecabacter antarcticus 238] gi|198265922|gb|EDY90192.1| ABC-type glutamine transport system, permease component [Octadecabacter antarcticus 238] Length = 206 Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 54/179 (30%), Positives = 93/179 (51%), Gaps = 27/179 (15%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 +++P+L + ++ +GLPT + G T+S F + +AL+ Sbjct: 49 RSVPILVLILWVYYGLPT----------------------VSGITLSV-FWAGVLALALS 85 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 +AF AEI R+G+ ++ RGQ EAA ++ L +R R ++LPQA+R I+P L +Q + +LK Sbjct: 86 DSAFQAEIFRAGIQSIGRGQYEAAQSVSLNYRDTMRYIILPQAIRRILPALGNQLVYMLK 145 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA----LFMNRLNAK 391 SSL +G +L ++ + +EI I + YL L ++++ F RL A Sbjct: 146 MSSLVSVIGLQELTRKANELVVSEYRPLEIYTILVLEYLVLILIVSAGVRWFERRLKAS 204 >gi|146312151|ref|YP_001177225.1| polar amino acid ABC transporter, inner membrane subunit [Enterobacter sp. 638] gi|145319027|gb|ABP61174.1| L-cystine ABC transporter membrane protein / Diaminopimelate ABC transporter membrane protein [Enterobacter sp. 638] Length = 222 Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 55/207 (26%), Positives = 105/207 (50%), Gaps = 18/207 (8%) Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251 F VLG +L+L + LP+ +++ F I LIA + +++ P Sbjct: 32 FGLVLGFILALM----------RMSPVLPVRWLARFYISVFRGTPLIAQLFMIYYGLP-- 79 Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311 QF G + P + I LS TAA+ +E +R+ + ++ +GQ EAA ++G+T + Sbjct: 80 -QF----GIELDP-IPAAMIGLSLNTAAYTSETLRAAISSIDKGQWEAAASIGMTPWQTL 133 Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371 R +LPQA R +PPL++ +++L+K++SLA + +L I ++T + + L Sbjct: 134 RRAILPQAARVALPPLSNSFISLVKDTSLAATIQVPELFRQAQLITSRTLEVFTMYLAAS 193 Query: 372 FIYLSLSIMIALFMNRLNAKIALKEKK 398 IY ++ +++ N ++ +E+ Sbjct: 194 LIYWVMATVLSALQNYFENQLNRQERD 220 Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust. Identities = 29/97 (29%), Positives = 46/97 (47%), Gaps = 8/97 (8%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G V T L+ GM ++G ++ R+S V W+ R Y+ VFR P + +F + Sbjct: 15 LLKGAVFTLQLSLGGMFFGLVLGFILALMRMSPVLPVRWLARFYISVFRGTPLIAQLFMI 74 Query: 149 YKSV----LSVLPIPDHSIVLPFGMFLNNRGLSFPTL 181 Y + + + PIP I G+ LN + TL Sbjct: 75 YYGLPQFGIELDPIPAAMI----GLSLNTAAYTSETL 107 >gi|94991751|ref|YP_599850.1| amino acid ABC transporter permease [Streptococcus pyogenes MGAS2096] gi|94545259|gb|ABF35306.1| Amino acid ABC transporter permease protein [Streptococcus pyogenes MGAS2096] Length = 387 Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 41/133 (30%), Positives = 75/133 (56%), Gaps = 1/133 (0%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G ++ +++I +S T A+++EIVR G+ AV +GQ EAA ALG TH + R ++LPQ Sbjct: 235 GISIDRTLAAIFI-VSINTGAYMSEIVRGGIFAVDKGQFEAATALGFTHGQTMRKIVLPQ 293 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378 +R+I+P ++++ +K++S+ + +L G T+ QT Q + I IY L+ Sbjct: 294 VVRNILPATGNEFVINIKDTSVLNVISVVELYFSGNTVATQTYQYFQTFTIIAIIYFVLT 353 Query: 379 IMIALFMNRLNAK 391 + + + + Sbjct: 354 FTVTRILRHIERR 366 >gi|58336908|ref|YP_193493.1| glutamine ABC transporter membrane protein [Lactobacillus acidophilus NCFM] gi|227903466|ref|ZP_04021271.1| glutamine ABC superfamily ATP binding cassette transporter membrane protein [Lactobacillus acidophilus ATCC 4796] gi|58254225|gb|AAV42462.1| glutamine ABC transporter (membrane protein) [Lactobacillus acidophilus NCFM] gi|227868786|gb|EEJ76207.1| glutamine ABC superfamily ATP binding cassette transporter membrane protein [Lactobacillus acidophilus ATCC 4796] Length = 218 Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 64/206 (31%), Positives = 101/206 (49%), Gaps = 31/206 (15%) Query: 193 SFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPTLVLIALKYQLHF 246 SFV+G++L L ++ G + LPLL I F FGLP L Sbjct: 34 SFVVGLILGLVRYMKIKYLSAIVGFIIDIIRNLPLLLIIFFTYFGLPQL----------- 82 Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306 G +P S+ AL + A +AEIVRSG+ +V GQME A + G+T Sbjct: 83 ------------GIVTNPTTASI-AALVIFEGAMLAEIVRSGIGSVDPGQMEGARSNGMT 129 Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ-TGQAIE 365 + +A V++PQA+ ++IP L SQ+++L+K++SLA + +L+ I +Q T I Sbjct: 130 YGQAMYHVVMPQALHNMIPALLSQFVSLVKDTSLATIIVLPELLYHAQIIYSQNTTYLIP 189 Query: 366 IILIWMFIYLSLSIMIALFMNRLNAK 391 + +I +Y + ++ N L K Sbjct: 190 MYVIIAIMYFIVCFCLSQVANYLQKK 215 >gi|307130767|ref|YP_003882783.1| arginine ABC transporter membrane protein [Dickeya dadantii 3937] gi|306528296|gb|ADM98226.1| arginine transporter subunit; membrane component of ABC superfamily [Dickeya dadantii 3937] Length = 238 Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 59/187 (31%), Positives = 99/187 (52%), Gaps = 10/187 (5%) Query: 217 KALPLLYISTFLIFGLPTLVL-IALKYQLHF---DKPV-LGQFNFIGGSTVSPEFMSLYI 271 + LP + + F+ FG L+L ++ + LH PV L NF VSP F+ I Sbjct: 55 RGLPEILVVLFIYFGSSQLLLMLSDGFTLHLGLTQVPVKLAIDNF----EVSP-FLCGVI 109 Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 ALS AA+ ++ +R L AVPRGQ E+ ALG++ R +++PQ R +P L +Q+ Sbjct: 110 ALSLLYAAYASQTLRGALKAVPRGQWESGQALGMSKSVIFRRLIMPQMWRHALPGLGNQW 169 Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 L LLK+++L + DL+ +I +T + +I IYL ++++ +NR+ + Sbjct: 170 LVLLKDTALVSLISVNDLMLQTKSIATRTQEPFTWYMIAAAIYLVITLLSQAILNRIEVR 229 Query: 392 IALKEKK 398 E++ Sbjct: 230 ATRFERR 236 >gi|255318801|ref|ZP_05360027.1| polar amino acid ABC transporter, inner membrane subunit [Acinetobacter radioresistens SK82] gi|262378935|ref|ZP_06072092.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Acinetobacter radioresistens SH164] gi|255304057|gb|EET83248.1| polar amino acid ABC transporter, inner membrane subunit [Acinetobacter radioresistens SK82] gi|262300220|gb|EEY88132.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Acinetobacter radioresistens SH164] Length = 227 Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 45/135 (33%), Positives = 76/135 (56%), Gaps = 6/135 (4%) Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320 T+ +S +A + AA+ +EIVR+G+ ++PRGQ AA ALG+T+ + RLV+LPQA Sbjct: 94 TIDTALVSSIVAFMLFEAAYFSEIVRAGIQSIPRGQSAAAYALGMTYSQNMRLVVLPQAF 153 Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVS---VGGTIINQTGQAIEIILIWMFIYLSL 377 R + P L Q + L ++S++ A+G D V G +++ Q IL +Y ++ Sbjct: 154 RKMTPLLLQQTIILFQDSTMVYAIGLLDFFRSNYVRGDLMSLLTQ---YILFAGLVYFTI 210 Query: 378 SIMIALFMNRLNAKI 392 S + + RL ++ Sbjct: 211 SALATYTVRRLQKRL 225 Score = 36.2 bits (82), Expect = 8.2, Method: Compositional matrix adjust. Identities = 17/44 (38%), Positives = 31/44 (70%) Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSV 152 +IGTL+ RLS+ +++ + + YV +FR+IP L+V+ + Y +V Sbjct: 38 LIGTLLALMRLSSFRILNLVAQAYVNLFRSIPLLLVLMWFYFAV 81 >gi|322386192|ref|ZP_08059825.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus cristatus ATCC 51100] gi|321269772|gb|EFX52699.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus cristatus ATCC 51100] Length = 230 Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 40/122 (32%), Positives = 74/122 (60%), Gaps = 2/122 (1%) Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 AA IAE+ ++ +AVP+GQ EA +++GLT + ++LPQA R +P LT+ +LNL+++ Sbjct: 109 AAMIAEVFKAAYLAVPKGQTEAGLSIGLTPVQTFLRIILPQAFRIALPNLTTAFLNLMRD 168 Query: 338 SSLAVAVGFADLVSVGGTII--NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395 ++LA +G D++ G +I N ++E IY ++++++L L + +K Sbjct: 169 AALAYTIGAVDVMGAGQNLISRNLGNYSLETYTAVALIYWGIALVVSLASQLLEKSLTVK 228 Query: 396 EK 397 E+ Sbjct: 229 ER 230 >gi|255262639|ref|ZP_05341981.1| glutamate/glutamine/aspartate/asparagine transport system permeaseprotein BztC [Thalassiobium sp. R2A62] gi|255104974|gb|EET47648.1| glutamate/glutamine/aspartate/asparagine transport system permeaseprotein BztC [Thalassiobium sp. R2A62] Length = 432 Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 38/96 (39%), Positives = 65/96 (67%), Gaps = 1/96 (1%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+ + I ++ ++AA+IAE+VR GL A+P+GQ EAA +LGL + +A RL++LPQA++ IP Sbjct: 297 FLRVVIMITIFSAAYIAEVVRGGLAALPKGQYEAADSLGLDYTQAMRLIILPQALKISIP 356 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVS-VGGTIINQT 360 + + + L K+++L + D+V + G I+ T Sbjct: 357 GIVNVSVGLFKDTTLVSVISMFDMVGMIRGPILAST 392 >gi|256830136|ref|YP_003158864.1| polar amino acid ABC transporter, inner membrane subunit [Desulfomicrobium baculatum DSM 4028] gi|256579312|gb|ACU90448.1| polar amino acid ABC transporter, inner membrane subunit [Desulfomicrobium baculatum DSM 4028] Length = 226 Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 40/129 (31%), Positives = 76/129 (58%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P ++ I ++ + A+IAEIVR + ++ GQ EA ++GLT + R ++ PQA + + Sbjct: 89 PPLIAGVIVIAINSGAYIAEIVRGAIQSINVGQTEAGRSIGLTRAQTMRYIIWPQAFKRM 148 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 IPPL +Q++ LK++SL + +G +L+ G I+ +A E+ + +YL +++ IA Sbjct: 149 IPPLGNQFIISLKDTSLLMVIGVGELLRTGQEIVAVNFRAFEVYMAVAMVYLVMTMSIAK 208 Query: 384 FMNRLNAKI 392 + L ++ Sbjct: 209 ALKILETRL 217 >gi|194016112|ref|ZP_03054727.1| glutamine-binding periplasmic protein/glutamine transport system permease protein [Bacillus pumilus ATCC 7061] gi|194012467|gb|EDW22034.1| glutamine-binding periplasmic protein/glutamine transport system permease protein [Bacillus pumilus ATCC 7061] Length = 225 Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 56/173 (32%), Positives = 95/173 (54%), Gaps = 15/173 (8%) Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLG-QFNFIGGSTVSPEFMSLYIALSCYTAAF 280 LYIS + G+P LV++ + L+F P +G +F + + + F S AA+ Sbjct: 64 LYIS--FMRGVPILVIL---FILYFGFPYIGIEFTAVTAAIIGFSFNS---------AAY 109 Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340 IAEI R+ L +VP GQ+EAA +LGL++ + R V+LPQ++R +PPLT+ L+L+K SSL Sbjct: 110 IAEINRAALSSVPSGQVEAAKSLGLSYWQTMRGVILPQSVRIALPPLTNVMLDLIKASSL 169 Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393 A + +L + + + + ++ IY + +++L + L A Sbjct: 170 AAMITVPELFQQAKIVGGREFDYMTMYILVALIYWGICSVVSLLQDFLEKHYA 222 >gi|75675719|ref|YP_318140.1| amino acid ABC transporter, inner membrane component [Nitrobacter winogradskyi Nb-255] gi|74420589|gb|ABA04788.1| amino acid ABC transporter membrane protein 2, PAAT family [Nitrobacter winogradskyi Nb-255] Length = 506 Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 38/97 (39%), Positives = 62/97 (63%) Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315 F+ G+ + + I ++ + A+ AE++R GL AVP GQ EAA ALGL++ K T L++ Sbjct: 359 FLPGNFTVDGLVRVLIGIALFAGAYNAEVIRGGLAAVPGGQAEAAHALGLSYWKTTGLIV 418 Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352 +PQA+R +IP L + ++ L K++SL V DL+ + Sbjct: 419 MPQAVRHVIPGLVNSFIALFKDTSLVSIVALFDLLGI 455 >gi|319761415|ref|YP_004125352.1| polar amino acid abc transporter, inner membrane subunit [Alicycliphilus denitrificans BC] gi|317115976|gb|ADU98464.1| polar amino acid ABC transporter, inner membrane subunit [Alicycliphilus denitrificans BC] Length = 223 Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 63/211 (29%), Positives = 111/211 (52%), Gaps = 14/211 (6%) Query: 188 KIFVFSFVLGIVLSL----FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243 K F+FS VL ++ +L F T L+ +GK L+ +T + G+ ++ L+ + Sbjct: 21 KGFIFSLVLTVIATLGGVLFGTLLA--LMRLSGKKW-LMAPATIYVNGMRSIPLVMVILW 77 Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 P+ I G + E S I + AA+ +EI+R+G+ +VPRGQ+ A AL Sbjct: 78 FFLLVPL------IIGRPIGAE-ASAIITFVAFEAAYFSEIMRAGIQSVPRGQVFAGQAL 130 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363 G+T+ + +LV+LPQA R+++P L +Q + L +++SL A+G D++ G+ Sbjct: 131 GMTYSQNMKLVVLPQAFRNMLPVLLTQTIILFQDTSLVYAIGAYDMLKGFDVAGKNFGRP 190 Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394 +E L Y + ++ + RL+ KIA+ Sbjct: 191 VEAYLAAAVAYFVICYSLSWAVKRLHKKIAI 221 >gi|238757266|ref|ZP_04618453.1| Glutamine transport system permease protein glnP [Yersinia aldovae ATCC 35236] gi|238704644|gb|EEP97174.1| Glutamine transport system permease protein glnP [Yersinia aldovae ATCC 35236] Length = 218 Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 41/118 (34%), Positives = 72/118 (61%) Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 + A+IAEI R ++++ G EA +ALGL+ R R V+ P A+R ++PPL +Q++ +K Sbjct: 100 SGAYIAEITRGAVLSIHNGFREAGLALGLSKRDTLRYVIAPLALRRMLPPLGNQWIVSIK 159 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394 ++SL + +G A+L G II +A+EI IYL +++ ++ + RL K+ + Sbjct: 160 DTSLFIVIGVAELTRQGQEIIAGNFRAMEIWSAVAVIYLIITLALSFVLRRLERKLKI 217 >gi|291301452|ref|YP_003512730.1| polar amino acid ABC transporter inner membrane subunit [Stackebrandtia nassauensis DSM 44728] gi|290570672|gb|ADD43637.1| polar amino acid ABC transporter, inner membrane subunit [Stackebrandtia nassauensis DSM 44728] Length = 220 Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 46/124 (37%), Positives = 71/124 (57%), Gaps = 7/124 (5%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I L YT A + E +RSG+ ++ GQ EAA ++GLT ++ V+LPQA R+++PPL S Sbjct: 92 IGLGTYTGALVGETLRSGINSISLGQAEAARSIGLTFGQSLSSVILPQAFRTVVPPLGSL 151 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI-------ILIWMFIYLSLSIMIAL 383 ++ L+KNS+LA AVG +L V + ++ I IL ++ I L S +I + Sbjct: 152 FIALVKNSALASAVGIIELSGVADQLQEDRNVSVSIWTIVIGVILFYLIINLPASYLIRV 211 Query: 384 FMNR 387 R Sbjct: 212 AEKR 215 >gi|224367655|ref|YP_002601818.1| AapM [Desulfobacterium autotrophicum HRM2] gi|223690371|gb|ACN13654.1| AapM [Desulfobacterium autotrophicum HRM2] Length = 364 Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 60/189 (31%), Positives = 99/189 (52%), Gaps = 13/189 (6%) Query: 207 LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF 266 L R KA ++YI LI G+P LI+L + P+L G T++ + Sbjct: 182 LGRQSRMPVIKAFSVVYIE--LIRGVP---LISLLFMSSVVFPLL----LPEGVTLN-KI 231 Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326 + +A+ +TAA+IAE+VR GL + RGQ EAA +LGL + + RL++LPQA++ +IPP Sbjct: 232 LRAQVAIIMFTAAYIAEVVRGGLQGMNRGQYEAAESLGLNYFQTMRLIILPQALKIVIPP 291 Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT---GQAIEIILIWMFIYLSLSIMIAL 383 S ++ K++SL V + DL+ T ++ G + E + IY ++ Sbjct: 292 SVSILISAFKDTSLVVIIALYDLLKTTQTTLSHPQWMGFSAEAYIFVALIYFVCCFFMSN 351 Query: 384 FMNRLNAKI 392 + RL ++ Sbjct: 352 YSRRLEREL 360 >gi|315612520|ref|ZP_07887433.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis ATCC 49296] gi|322374942|ref|ZP_08049456.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus sp. C300] gi|315315501|gb|EFU63540.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis ATCC 49296] gi|321280442|gb|EFX57481.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus sp. C300] Length = 521 Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 39/109 (35%), Positives = 66/109 (60%) Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 +S T A++ EIVR G++AV +GQ EAA ALG+TH + R ++LPQ +R+I+P ++++ Sbjct: 383 VSINTGAYMTEIVRGGILAVDKGQFEAATALGMTHNQTMRKIVLPQVVRNILPATGNEFV 442 Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 +K++S+ + +L G T+ QT Q + I IY L+ + Sbjct: 443 INIKDTSVLNVISVVELYFSGNTVATQTYQYFQTFTIIAVIYFVLTFTV 491 >gi|301645563|ref|ZP_07245493.1| ABC transporter, permease protein [Escherichia coli MS 146-1] gi|307138585|ref|ZP_07497941.1| putative transporter subunit [Escherichia coli H736] gi|331642540|ref|ZP_08343675.1| inner membrane amino-acid ABC transporter permease protein YecS [Escherichia coli H736] gi|301076172|gb|EFK90978.1| ABC transporter, permease protein [Escherichia coli MS 146-1] gi|331039338|gb|EGI11558.1| inner membrane amino-acid ABC transporter permease protein YecS [Escherichia coli H736] Length = 222 Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 62/207 (29%), Positives = 108/207 (52%), Gaps = 18/207 (8%) Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251 F +LG +L+L RLS + + L YIS F G P LIA + +++ P Sbjct: 32 FGLLLGFILALM--RLSPIWPVRW---LARFYISIFR--GTP---LIAQLFMIYYGLP-- 79 Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311 QF G + P S I LS TAA+ AE +R+ + ++ +GQ EAA ++G+T + Sbjct: 80 -QF----GIELDP-IPSAMIGLSLNTAAYAAETLRAAISSIDKGQWEAAASIGMTPWQTM 133 Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371 R +LPQA R +PPL++ +++L+K++SLA + +L I ++T + L Sbjct: 134 RRAILPQAARVALPPLSNSFISLVKDTSLAATIQVPELFRQAQLITSRTLDVFTMYLAAS 193 Query: 372 FIYLSLSIMIALFMNRLNAKIALKEKK 398 IY ++ +++ N ++ +E++ Sbjct: 194 LIYWIMATVLSTLQNHFENQLNRQERE 220 Score = 37.0 bits (84), Expect = 5.9, Method: Compositional matrix adjust. Identities = 28/97 (28%), Positives = 45/97 (46%), Gaps = 8/97 (8%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G T L+ GM ++G ++ RLS V W+ R Y+ +FR P + +F + Sbjct: 15 LLKGAGYTLQLSIGGMFFGLLLGFILALMRLSPIWPVRWLARFYISIFRGTPLIAQLFMI 74 Query: 149 YKSV----LSVLPIPDHSIVLPFGMFLNNRGLSFPTL 181 Y + + + PIP I G+ LN + TL Sbjct: 75 YYGLPQFGIELDPIPSAMI----GLSLNTAAYAAETL 107 >gi|284043462|ref|YP_003393802.1| polar amino acid ABC transporter inner membrane subunit [Conexibacter woesei DSM 14684] gi|283947683|gb|ADB50427.1| polar amino acid ABC transporter, inner membrane subunit [Conexibacter woesei DSM 14684] Length = 335 Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 39/133 (29%), Positives = 78/133 (58%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+ + L A++AEIVR+G+++V GQ A+ ALG+T + R ++LPQAMR IIP Sbjct: 164 FVVALLGLGLNEGAYMAEIVRAGVLSVDEGQTHASQALGMTRLQTMRRIVLPQAMRVIIP 223 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 P ++ +++LK +SL + +A+L+ I ++ + I+++++ YL ++ ++ + Sbjct: 224 PTGNETISMLKTTSLVSVIAYAELLYASQLIYSENYRTIQLLIVASIWYLVMTTVLTIGQ 283 Query: 386 NRLNAKIALKEKK 398 L + ++ Sbjct: 284 AWLERRFGRGTRR 296 Score = 38.9 bits (89), Expect = 1.5, Method: Compositional matrix adjust. Identities = 23/66 (34%), Positives = 34/66 (51%) Query: 82 DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141 D + ++ G V T + + M+ +IG L+ RLS N LVA + YV +FR P Sbjct: 65 DYLFDPRVMDGVVLTIEITIAAMVAGVLIGVLLAVMRLSPNPLVAAVAGFYVWIFRGTPV 124 Query: 142 LVVIFF 147 LV + F Sbjct: 125 LVQLLF 130 >gi|262184190|ref|ZP_06043611.1| putative ABC transport system, permease protein [Corynebacterium aurimucosum ATCC 700975] Length = 317 Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 48/130 (36%), Positives = 75/130 (57%), Gaps = 4/130 (3%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + L AA++AEIVRSG+ +VP GQ EA+ ALG+ R +LPQAMR IIPP ++ Sbjct: 160 LGLGLNEAAYMAEIVRSGISSVPEGQKEASKALGMGWWMTMRRTVLPQAMRIIIPPTGNE 219 Query: 331 YLNLLKNSSLAVAVGF-ADLVSVGGTIINQTGQAIEIILI---WMFIYLSLSIMIALFMN 386 +++LLK SSL VA+ + A++ I + I ++++ W SL ++ F+ Sbjct: 220 FISLLKTSSLVVAIPYTAEIFGRATDISAALFEPIPLLMVAATWYLAITSLLMVGQYFLE 279 Query: 387 RLNAKIALKE 396 R + A +E Sbjct: 280 RRFERGATRE 289 >gi|225686457|ref|YP_002734429.1| amino acid ABC transporter permease, 3-TM region, His/Glu/Gln/Arg/opine family protein [Brucella melitensis ATCC 23457] gi|256043565|ref|ZP_05446492.1| cystine transport system permease protein [Brucella melitensis bv. 1 str. Rev.1] gi|256111397|ref|ZP_05452423.1| cystine transport system permease protein [Brucella melitensis bv. 3 str. Ether] gi|265999077|ref|ZP_05464935.2| cystine transport system permease [Brucella melitensis bv. 2 str. 63/9] gi|225642562|gb|ACO02475.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family protein [Brucella melitensis ATCC 23457] gi|263092136|gb|EEZ16433.1| cystine transport system permease [Brucella melitensis bv. 2 str. 63/9] gi|326410835|gb|ADZ67899.1| amino acid ABC transporter permease, 3-TM region, His/Glu/Gln/Arg/opine family protein [Brucella melitensis M28] gi|326554126|gb|ADZ88765.1| amino acid ABC transporter permease, 3-TM region, His/Glu/Gln/Arg/opine family protein [Brucella melitensis M5-90] Length = 226 Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 40/126 (31%), Positives = 77/126 (61%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + I + A+ +EI+R+ + +VP+GQ EAA ++G++ R+A +LPQA R+ +P Sbjct: 89 FPAALIGFTLNIGAYSSEIIRAVISSVPKGQWEAAYSIGMSWRQALIRTILPQATRTAVP 148 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PL++ +++L+K++SLA A+ +L I+ T + + + + IYL+LS +++ Sbjct: 149 PLSNTFISLIKDTSLAAAITVPELFQSAQRIVATTYEPLILYIEAALIYLALSSILSALQ 208 Query: 386 NRLNAK 391 RL + Sbjct: 209 VRLERR 214 >gi|218658149|ref|ZP_03514079.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium etli IE4771] Length = 177 Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 41/115 (35%), Positives = 70/115 (60%), Gaps = 9/115 (7%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I +S + A++AE++R GL A+PRGQ EA +LGL + +A RLV++PQA++ IP + + Sbjct: 53 IMVSLFATAYMAEVIRGGLAALPRGQYEAGESLGLDYWQAQRLVIMPQALKISIPSIVNT 112 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS-LSIMIALF 384 ++ L K++++ V +G D +++ +I T W IY LS+ + LF Sbjct: 113 FIGLFKDTTIVVFIGLLDPIALTNSIRATTD--------WQGIYWELLSLPVPLF 159 >gi|324992354|gb|EGC24275.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK405] gi|324996123|gb|EGC28034.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK678] gi|327460583|gb|EGF06918.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK1] gi|327488940|gb|EGF20737.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK1058] Length = 521 Score = 76.3 bits (186), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 40/106 (37%), Positives = 65/106 (61%) Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 +S T A+++EIVR G+ AV +GQ EAA ALG+TH + R ++LPQ +R+I+P ++++ Sbjct: 383 VSINTGAYMSEIVRGGIFAVDKGQFEAATALGMTHGQTMRKIVLPQVVRNILPATGNEFV 442 Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378 +K++S+ + +L G TI QT Q + I IY L+ Sbjct: 443 INIKDTSVLNVISVVELYFSGNTIATQTYQYFQTFTIIAAIYFVLT 488 Score = 37.4 bits (85), Expect = 3.7, Method: Compositional matrix adjust. Identities = 28/88 (31%), Positives = 40/88 (45%), Gaps = 11/88 (12%) Query: 96 TFWLAFSGMIPATIIGTLVGAGRL---SANKLVA-------WICRVYVEVFRNIPPLVVI 145 T ++ +G I IIG L+G R S NKL+A W VY+E+FR P +V Sbjct: 299 TLLISITGTIAGLIIGLLIGVYRTAPASKNKLLASLQKIFGWFLNVYIEIFRGTPMIVQS 358 Query: 146 FFLYKSVLSVLPIP-DHSIVLPFGMFLN 172 +Y I D +I F + +N Sbjct: 359 MVIYYGTAQAFGISIDRTIAAIFIVSIN 386 >gi|227510040|ref|ZP_03940089.1| glutamate ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227512970|ref|ZP_03943019.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus buchneri ATCC 11577] gi|227083727|gb|EEI19039.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus buchneri ATCC 11577] gi|227190419|gb|EEI70486.1| glutamate ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 716 Score = 76.3 bits (186), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 57/198 (28%), Positives = 96/198 (48%), Gaps = 32/198 (16%) Query: 192 FSFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPTLVLIALKYQLH 245 F+ + GIV+ L + F+ + + +PLL ++ F+ G+P+L Sbjct: 531 FATIFGIVVGLMGVVPGKFFNWLSSILIYLFRGMPLLVLALFIYTGIPSLT--------- 581 Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305 G + P F++ + L+ A+IA V+ G+ AV GQMEAA +LGL Sbjct: 582 -------------GEKI-PAFVAGVVTLTFNEGAYIAAFVKGGIQAVDPGQMEAARSLGL 627 Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365 K+ R V+LPQ +R +IP +Q++ LK++S+ +G +L G II + +E Sbjct: 628 PFGKSMRKVILPQGIRIMIPSFINQFIITLKDTSILSIIGLLELTQTGKIIIARN---LE 684 Query: 366 IILIWMFIYLSLSIMIAL 383 +W + L I+I L Sbjct: 685 GFKVWTIVALMYLIIITL 702 Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust. Identities = 22/68 (32%), Positives = 35/68 (51%) Query: 88 AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147 A+L G T WL + ATI G +VG + K W+ + + +FR +P LV+ F Sbjct: 513 ALLSGLKETMWLTVVSIFFATIFGIVVGLMGVVPGKFFNWLSSILIYLFRGMPLLVLALF 572 Query: 148 LYKSVLSV 155 +Y + S+ Sbjct: 573 IYTGIPSL 580 >gi|186472110|ref|YP_001859452.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia phymatum STM815] gi|184194442|gb|ACC72406.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia phymatum STM815] Length = 248 Score = 76.3 bits (186), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 44/125 (35%), Positives = 74/125 (59%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 E + +A++ A+ EIVR+G+ ++PRGQ++AA ALGL R+ R V+LPQA+ ++ Sbjct: 89 EIQAAILAMTVNLGAYAIEIVRAGIDSIPRGQVQAAQALGLQGRQVFRHVVLPQAIANVF 148 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 P L SQ L ++ S++ + DL I ++ ++ E +I YL+LSI++ Sbjct: 149 PALLSQVLIVMLGSAVVSQISVPDLTYAANYIQSRNFRSFEAYVIITATYLALSIVLRQL 208 Query: 385 MNRLN 389 +NRL Sbjct: 209 LNRLG 213 >gi|90961557|ref|YP_535473.1| glutamine-binding protein / glutamine transport system permease protein [Lactobacillus salivarius UCC118] gi|90820751|gb|ABD99390.1| Glutamine-binding protein / Glutamine transport system permease protein [Lactobacillus salivarius UCC118] Length = 485 Score = 76.3 bits (186), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 50/157 (31%), Positives = 81/157 (51%), Gaps = 26/157 (16%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 + LPLL ++ F+ G+P+L GS + P F++ I L+ Sbjct: 331 RGLPLLVLALFIYNGIPSLT----------------------GSKI-PAFIAGIITLTLN 367 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 A+ A V+ G+ AV +GQMEAA +LGL+ K+ R V+LPQ ++ +IP +Q++ LK Sbjct: 368 EGAYTAAFVKGGIEAVDKGQMEAARSLGLSFGKSMRKVILPQGVKIMIPSFINQFIITLK 427 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI 373 ++S+ +G +L G II + +E IW I Sbjct: 428 DTSILSIIGILELTQTGKIIIARN---LEGFRIWGII 461 Score = 41.6 bits (96), Expect = 0.20, Method: Compositional matrix adjust. Identities = 25/68 (36%), Positives = 35/68 (51%) Query: 88 AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147 A L G V T L G+I ATI G L+G + NK I + +FR +P LV+ F Sbjct: 282 AFLDGIVETLKLTVVGIIGATIFGILIGMLGVVPNKFAQGISTTIIYIFRGLPLLVLALF 341 Query: 148 LYKSVLSV 155 +Y + S+ Sbjct: 342 IYNGIPSL 349 >gi|302191162|ref|ZP_07267416.1| glutamine ABC transporter substrate binding/permease protein [Lactobacillus iners AB-1] gi|309803182|ref|ZP_07697279.1| ABC transporter, permease protein [Lactobacillus iners LactinV 11V1-d] gi|308164690|gb|EFO66940.1| ABC transporter, permease protein [Lactobacillus iners LactinV 11V1-d] Length = 492 Score = 76.3 bits (186), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 64/210 (30%), Positives = 110/210 (52%), Gaps = 28/210 (13%) Query: 189 IFVFSFVLGIVLS--LFATRLSRHFHEKTGKALP-LLYISTFLIFGLPTLVLIALKYQLH 245 I +FS ++G++L L RLS H K +P + YI LI G P +V I Y Sbjct: 299 ITIFSVLIGVILGTILALMRLSSHLALK----IPAICYIE--LIRGTPQMVQILFVY--- 349 Query: 246 FDKPVLGQFNFIGGSTVS--PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 F G+ + ++ IA+ + A++AE +RSG+ ++P GQ EAA +L Sbjct: 350 ----------FGIGAIIQNMSALLAGIIAIGLNSGAYVAEDIRSGINSLPVGQAEAARSL 399 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363 GL+ R V++PQA+++I P L ++++ LLK+SSL +G A+ + + T Q Sbjct: 400 GLSKAATYRYVVIPQAIKNIWPALGNEFITLLKDSSLVSIIGVAETMYQTQLVQTSTYQG 459 Query: 364 IEIILIWMFIY----LSLSIMIALFMNRLN 389 + +++ M IY +L+ +++ R+N Sbjct: 460 VFPLVVAMAIYFIMTFTLTRILSYMERRMN 489 >gi|238761693|ref|ZP_04622668.1| Polar amino acid ABC transporter, inner membrane subunit [Yersinia kristensenii ATCC 33638] gi|238700207|gb|EEP92949.1| Polar amino acid ABC transporter, inner membrane subunit [Yersinia kristensenii ATCC 33638] Length = 220 Score = 76.3 bits (186), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 52/176 (29%), Positives = 94/176 (53%), Gaps = 18/176 (10%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 V F +G+V+ L + H + G+ +YIS F G P L + L + L + Sbjct: 32 VAGFFIGVVIYLMESG-----HSRFGRGFARVYISLFR--GTPVLAQVLLCFYLPGE--- 81 Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 +G S P +++ +AL+ TAA+ ++I+RSG A+P GQ+EAA GL+ R+ Sbjct: 82 ------LGLSL--PGYLAAVMALTLNTAAYQSQILRSGFAAIPPGQLEAAAMCGLSSRQT 133 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 + +PQ +R +P L S+ ++++K S++ + DL+ VG + + T + +E+ Sbjct: 134 LWYIQIPQVLRLTMPSLISELIDVIKASAVVSVIAITDLMRVGQQLASATYRPLEV 189 >gi|229551216|ref|ZP_04439941.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus rhamnosus LMS2-1] gi|229315379|gb|EEN81352.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus rhamnosus LMS2-1] Length = 566 Score = 76.3 bits (186), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 42/110 (38%), Positives = 70/110 (63%) Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 +S T A+I+EI+R G+I+V GQ EAA ALG+TH + V+LPQA+R+ +P +T++++ Sbjct: 421 VSINTGAYISEIIRGGIISVDEGQFEAANALGMTHLQTMMKVILPQAVRNSLPAVTNEFI 480 Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382 +K++S+ + ++L G TI Q+ Q LI IYL ++ I+ Sbjct: 481 VNIKDTSVLSVISVSELFFSGETIAGQSFQFFHTYLIVSGIYLIMTFTIS 530 >gi|168180087|ref|ZP_02614751.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Clostridium botulinum NCTC 2916] gi|182668974|gb|EDT80950.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Clostridium botulinum NCTC 2916] Length = 219 Score = 76.3 bits (186), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 39/124 (31%), Positives = 73/124 (58%), Gaps = 3/124 (2%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I L+ AA+++EI+R+ +I++ RGQ EA +LG T + ++LPQA++ +PPL + Sbjct: 94 IGLALNGAAYMSEIIRAAIISIDRGQEEAGFSLGYTRFQNLHYIILPQAVKISVPPLVNG 153 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL---FMNR 387 + +LLK++SL + +L G I ++T + E+ L Y L+ ++++ F+ + Sbjct: 154 FSSLLKDTSLVSVISITELTRSGNLIYSRTAKPFEVYLTLGLFYFVLTYIVSICSKFIEK 213 Query: 388 LNAK 391 N K Sbjct: 214 RNEK 217 >gi|306832761|ref|ZP_07465897.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus bovis ATCC 700338] gi|304425110|gb|EFM28240.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus bovis ATCC 700338] Length = 523 Score = 76.3 bits (186), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 39/109 (35%), Positives = 65/109 (59%) Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 +S T A+++EIVR G+ AV +GQ EAA ALG TH + R ++LPQ +R+I+P ++++ Sbjct: 386 VSINTGAYMSEIVRGGIFAVDKGQFEAATALGFTHGQTMRKIVLPQVVRNILPATGNEFV 445 Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 +K++S+ + +L G T+ QT Q + I IY L+ + Sbjct: 446 INIKDTSVLNVISVVELYFSGNTVATQTYQYFQTFTIIAIIYFILTFTV 494 >gi|254699907|ref|ZP_05161735.1| amino acid ABC transporter, permease protein [Brucella suis bv. 5 str. 513] gi|254705829|ref|ZP_05167657.1| amino acid ABC transporter, permease protein [Brucella pinnipedialis M163/99/10] gi|254711057|ref|ZP_05172868.1| amino acid ABC transporter, permease protein [Brucella pinnipedialis B2/94] gi|256015453|ref|YP_003105462.1| amino acid ABC transporter, permease protein [Brucella microti CCM 4915] gi|256029438|ref|ZP_05443052.1| amino acid ABC transporter, permease protein [Brucella pinnipedialis M292/94/1] gi|256059129|ref|ZP_05449338.1| amino acid ABC transporter, permease protein [Brucella neotomae 5K33] gi|260167469|ref|ZP_05754280.1| amino acid ABC transporter, permease protein [Brucella sp. F5/99] gi|261313256|ref|ZP_05952453.1| polar amino acid ABC transporter [Brucella pinnipedialis M163/99/10] gi|261750383|ref|ZP_05994092.1| polar amino acid ABC transporter [Brucella suis bv. 5 str. 513] gi|255998113|gb|ACU49800.1| amino acid ABC transporter, permease protein [Brucella microti CCM 4915] gi|261302282|gb|EEY05779.1| polar amino acid ABC transporter [Brucella pinnipedialis M163/99/10] gi|261740136|gb|EEY28062.1| polar amino acid ABC transporter [Brucella suis bv. 5 str. 513] Length = 226 Score = 76.3 bits (186), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 40/126 (31%), Positives = 77/126 (61%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + I + A+ +EI+R+ + +VP+GQ EAA ++G++ R+A +LPQA R+ +P Sbjct: 89 FPAALIGFTLNIGAYSSEIIRAVISSVPKGQWEAAYSIGMSWRQALIRTILPQATRTAVP 148 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PL++ +++L+K++SLA A+ +L I+ T + + + + IYL+LS +++ Sbjct: 149 PLSNTFISLIKDTSLAAAITVPELFQSAQRIVATTYEPLILYIEAALIYLALSSILSALQ 208 Query: 386 NRLNAK 391 RL + Sbjct: 209 VRLERR 214 >gi|163733774|ref|ZP_02141216.1| amino acid ABC transporter, permease protein [Roseobacter litoralis Och 149] gi|161392885|gb|EDQ17212.1| amino acid ABC transporter, permease protein [Roseobacter litoralis Och 149] Length = 432 Score = 76.3 bits (186), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 65/210 (30%), Positives = 109/210 (51%), Gaps = 16/210 (7%) Query: 152 VLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHF 211 +L L IP+++ + +R L L M S LGIVL+L R Sbjct: 198 ILGGLLIPENANETAMMTAVPSRDLGGFMLNMMLGVTCVSLSVPLGIVLAL-----GRQS 252 Query: 212 HEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYI 271 K + +++I I G+P + L+ F V+ + F STV F+ + I Sbjct: 253 SMPLIKWICVIFIE--FIRGVPLITLL-------FVASVMLAYFFPPESTVD-LFLRVVI 302 Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 ++ +++A+IAE++R GL A+P+GQ E A +LGL + +ATRL++LPQA++ IP + + Sbjct: 303 MITMFSSAYIAEVIRGGLAALPKGQYEGADSLGLDYTQATRLIILPQALKISIPGIVNVA 362 Query: 332 LNLLKNSSLAVAVGFADLVS-VGGTIINQT 360 + L K+++L + DLV + G I+ T Sbjct: 363 VGLFKDTTLVSVISMFDLVGMIRGPILAST 392 >gi|27364436|ref|NP_759964.1| amino acid ABC transporter permease [Vibrio vulnificus CMCP6] gi|27360555|gb|AAO09491.1| Amino acid ABC transporter, permease protein [Vibrio vulnificus CMCP6] Length = 223 Score = 76.3 bits (186), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 57/171 (33%), Positives = 94/171 (54%), Gaps = 17/171 (9%) Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV-LIAL 240 TM+ VFS VL ++L+ R F L LYIS F G P LV L L Sbjct: 22 TMEMAILGLVFSLVLAVILANI-----RVFRLPILDPLSQLYISFFR--GTPLLVQLFLL 74 Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300 Y L P++ + F + I L+ + AA++AE +R+ +I + R QMEA+ Sbjct: 75 YYGLPQIFPIMVGLD---------AFSAAVIGLTLHFAAYMAESIRAAIIGIDRSQMEAS 125 Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 +++G+T +A R V+LPQA R +P L + +++++K++SLA +G A++++ Sbjct: 126 LSVGMTTSQAMRRVILPQATRVALPSLMNYFIDMIKSTSLAFTLGVAEIMA 176 >gi|309804770|ref|ZP_07698834.1| ABC transporter, permease protein [Lactobacillus iners LactinV 09V1-c] gi|309806268|ref|ZP_07700281.1| ABC transporter, permease protein [Lactobacillus iners LactinV 03V1-b] gi|312871595|ref|ZP_07731687.1| ABC transporter, permease protein [Lactobacillus iners LEAF 3008A-a] gi|312871955|ref|ZP_07732037.1| ABC transporter, permease protein [Lactobacillus iners LEAF 2062A-h1] gi|312873247|ref|ZP_07733303.1| ABC transporter, permease protein [Lactobacillus iners LEAF 2052A-d] gi|312874656|ref|ZP_07734680.1| ABC transporter, permease protein [Lactobacillus iners LEAF 2053A-b] gi|325911684|ref|ZP_08174091.1| ABC transporter, permease protein [Lactobacillus iners UPII 143-D] gi|325913019|ref|ZP_08175392.1| ABC transporter, permease protein [Lactobacillus iners UPII 60-B] gi|329921097|ref|ZP_08277620.1| ABC transporter, permease protein [Lactobacillus iners SPIN 1401G] gi|308165880|gb|EFO68099.1| ABC transporter, permease protein [Lactobacillus iners LactinV 09V1-c] gi|308167252|gb|EFO69418.1| ABC transporter, permease protein [Lactobacillus iners LactinV 03V1-b] gi|311089886|gb|EFQ48306.1| ABC transporter, permease protein [Lactobacillus iners LEAF 2053A-b] gi|311091258|gb|EFQ49646.1| ABC transporter, permease protein [Lactobacillus iners LEAF 2052A-d] gi|311092532|gb|EFQ50894.1| ABC transporter, permease protein [Lactobacillus iners LEAF 2062A-h1] gi|311092820|gb|EFQ51172.1| ABC transporter, permease protein [Lactobacillus iners LEAF 3008A-a] gi|325476450|gb|EGC79609.1| ABC transporter, permease protein [Lactobacillus iners UPII 143-D] gi|325477699|gb|EGC80838.1| ABC transporter, permease protein [Lactobacillus iners UPII 60-B] gi|328935004|gb|EGG31493.1| ABC transporter, permease protein [Lactobacillus iners SPIN 1401G] Length = 492 Score = 76.3 bits (186), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 64/210 (30%), Positives = 110/210 (52%), Gaps = 28/210 (13%) Query: 189 IFVFSFVLGIVLS--LFATRLSRHFHEKTGKALP-LLYISTFLIFGLPTLVLIALKYQLH 245 I +FS ++G++L L RLS H K +P + YI LI G P +V I Y Sbjct: 299 ITIFSVLIGVILGTILALMRLSSHLALK----IPAICYIE--LIRGTPQMVQILFVY--- 349 Query: 246 FDKPVLGQFNFIGGSTVS--PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 F G+ + ++ IA+ + A++AE +RSG+ ++P GQ EAA +L Sbjct: 350 ----------FGIGAIIQNMSALLAGIIAIGLNSGAYVAEDIRSGINSLPVGQAEAARSL 399 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363 GL+ R V++PQA+++I P L ++++ LLK+SSL +G A+ + + T Q Sbjct: 400 GLSKAATYRYVVIPQAIKNIWPALGNEFITLLKDSSLVSIIGVAETMYQTQLVQTSTYQG 459 Query: 364 IEIILIWMFIY----LSLSIMIALFMNRLN 389 + +++ M IY +L+ +++ R+N Sbjct: 460 VFPLVVAMAIYFIMTFTLTRILSYMERRMN 489 >gi|70732346|ref|YP_262102.1| amino acid ABC transporter permease [Pseudomonas fluorescens Pf-5] gi|68346645|gb|AAY94251.1| amino acid ABC transporter, permease protein [Pseudomonas fluorescens Pf-5] Length = 229 Score = 76.3 bits (186), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 59/172 (34%), Positives = 88/172 (51%), Gaps = 10/172 (5%) Query: 223 YISTFLIFGLPTLVLIALKYQLHFD-KPVLGQFNFIGGSTVSP----EFMSLYIALSCYT 277 YIS F G P LV I Y L++ + + I GS + P F + +AL+ Sbjct: 56 YISVFR--GTPLLVQI---YILYYGVGSLFAAYPPIRGSFLWPYLREGFWYVALALTLSV 110 Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 A++ E++R GL AVPRG++EAA A G+ H R V LP+A+ + P L + + LLK Sbjct: 111 GAYVGEVLRGGLRAVPRGELEAARAYGMGHWLTLRRVWLPRALELVRPTLVGECVLLLKA 170 Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 ++LA V DL+ + QT + E +L IY+ L+ +I RL Sbjct: 171 TALASTVAVTDLLGAANLVRAQTLKVYEPLLAVALIYIVLAFVIEHLCARLG 222 >gi|227524183|ref|ZP_03954232.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus hilgardii ATCC 8290] gi|227088653|gb|EEI23965.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus hilgardii ATCC 8290] Length = 242 Score = 76.3 bits (186), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 61/216 (28%), Positives = 102/216 (47%), Gaps = 31/216 (14%) Query: 168 GMFLNNRG--LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTG------KAL 219 G+ N+G LS TM F+ + GIV+ L + F+ + + + Sbjct: 31 GLIKQNQGALLSGLKETMWLTVVSIFFATIFGIVVGLMGVVPGKFFNWLSSILIYLFRGM 90 Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279 PLL ++ F+ G+P+L G + P F++ + L+ A Sbjct: 91 PLLVLALFIYTGIPSLT----------------------GEKI-PAFVAGVVTLTFNEGA 127 Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339 +IA V+ G+ AV GQMEAA +LGL K+ R V+LPQ +R +IP +Q++ LK++S Sbjct: 128 YIAAFVKGGIQAVDPGQMEAARSLGLPFGKSMRKVILPQGIRIMIPSFINQFIITLKDTS 187 Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375 + +G +L G II + + ++ I +YL Sbjct: 188 ILSIIGLLELTQTGKIIIARNLEGFKVWTIVALMYL 223 Score = 40.0 bits (92), Expect = 0.63, Method: Compositional matrix adjust. Identities = 22/68 (32%), Positives = 35/68 (51%) Query: 88 AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147 A+L G T WL + ATI G +VG + K W+ + + +FR +P LV+ F Sbjct: 39 ALLSGLKETMWLTVVSIFFATIFGIVVGLMGVVPGKFFNWLSSILIYLFRGMPLLVLALF 98 Query: 148 LYKSVLSV 155 +Y + S+ Sbjct: 99 IYTGIPSL 106 >gi|209547536|ref|YP_002279454.1| polar amino acid ABC transporter inner membrane protein [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209538780|gb|ACI58714.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 220 Score = 76.3 bits (186), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 49/178 (27%), Positives = 91/178 (51%), Gaps = 24/178 (13%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 + LP+L + F F LP + L DK S + LS Y Sbjct: 65 RNLPILVLVLFAFFALP-------QMGLRLDK-----------------IKSFVLVLSLY 100 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 + A++AE+ R+GL+++P+G EA +A+GLT + ++ P +R+++P L+S ++L K Sbjct: 101 SGAYLAEVFRAGLLSIPKGLTEAGLAIGLTGMQIRSSIIAPLMLRNVLPSLSSTIISLFK 160 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394 ++SLA A+ +L I ++ + IE ++ +Y++ +IA M + ++AL Sbjct: 161 DTSLAAAIAVPELTFAARKINVESFRVIETWMVTSALYVATCFLIAAVMRFVERRLAL 218 >gi|153216007|ref|ZP_01950229.1| amino acid ABC transporter, permease protein [Vibrio cholerae 1587] gi|124114520|gb|EAY33340.1| amino acid ABC transporter, permease protein [Vibrio cholerae 1587] Length = 298 Score = 76.3 bits (186), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 44/134 (32%), Positives = 75/134 (55%) Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317 G + + +S + + ++A+IAEIVR+GL +P+GQ EAA +LGL R V+ P Sbjct: 158 GPARLWENLLSGVLCIGLLSSAYIAEIVRAGLANIPQGQWEAADSLGLPTWVKYRYVIAP 217 Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377 Q + +I P L Q ++L+K++S+ + +L VG I N +G EI LI YL L Sbjct: 218 QVLTAITPALAGQTISLIKDTSIISLISIQELTFVGSEIANSSGLIFEIWLIVGAAYLVL 277 Query: 378 SIMIALFMNRLNAK 391 + +++ ++ + Sbjct: 278 CLSLSMLFKQVEKR 291 >gi|312863976|ref|ZP_07724212.1| ABC transporter, permease protein [Streptococcus vestibularis F0396] gi|311100389|gb|EFQ58596.1| ABC transporter, permease protein [Streptococcus vestibularis F0396] Length = 515 Score = 76.3 bits (186), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 38/109 (34%), Positives = 66/109 (60%) Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 +S T A+++EIVR G+ AV +GQ EAA ALG TH + R ++LPQ +R+I+P ++++ Sbjct: 385 VSINTGAYMSEIVRGGIFAVDKGQFEAATALGFTHGQTMRKIVLPQVIRNILPATGNEFV 444 Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 +K++S+ + +L G T+ +QT Q + + IY L+ + Sbjct: 445 INIKDTSVLNVISVVELYFAGNTVASQTYQYFQTFFVIAAIYFVLTFTV 493 Score = 36.2 bits (82), Expect = 8.8, Method: Compositional matrix adjust. Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 10/64 (15%) Query: 96 TFWLAFSGMIPATIIGTLVGAGRLS---ANKLVA-------WICRVYVEVFRNIPPLVVI 145 T ++ G + T IG ++G R + ANK VA W+ VY+EVFR P +V Sbjct: 301 TLLISIIGTVVGTFIGLMIGVYRTAPKAANKFVALLQKLFGWVLNVYIEVFRGTPMIVQS 360 Query: 146 FFLY 149 +Y Sbjct: 361 MVIY 364 >gi|265985359|ref|ZP_06098094.1| polar amino acid ABC transporter [Brucella sp. 83/13] gi|306845793|ref|ZP_07478361.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Brucella sp. BO1] gi|264663951|gb|EEZ34212.1| polar amino acid ABC transporter [Brucella sp. 83/13] gi|306273685|gb|EFM55523.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Brucella sp. BO1] Length = 219 Score = 76.3 bits (186), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 40/126 (31%), Positives = 77/126 (61%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + I + A+ +EI+R+ + +VP+GQ EAA ++G++ R+A +LPQA R+ +P Sbjct: 82 FPAALIGFTLNIGAYSSEIIRAVISSVPKGQWEAAYSIGMSWRQALIRTILPQATRTAVP 141 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PL++ +++L+K++SLA A+ +L I+ T + + + + IYL+LS +++ Sbjct: 142 PLSNTFISLVKDTSLAAAITVPELFQSAQRIVATTYEPLILYIEAALIYLALSSILSALQ 201 Query: 386 NRLNAK 391 RL + Sbjct: 202 VRLERR 207 >gi|262191876|ref|ZP_06050045.1| amino acid ABC transporter permease protein [Vibrio cholerae CT 5369-93] gi|262032241|gb|EEY50810.1| amino acid ABC transporter permease protein [Vibrio cholerae CT 5369-93] Length = 298 Score = 76.3 bits (186), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 44/134 (32%), Positives = 75/134 (55%) Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317 G + + +S + + ++A+IAEIVR+GL +P+GQ EAA +LGL R V+ P Sbjct: 158 GPARLWENLLSGVLCIGLLSSAYIAEIVRAGLANIPQGQWEAADSLGLPTWVKYRYVIAP 217 Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377 Q + +I P L Q ++L+K++S+ + +L VG I N +G EI LI YL L Sbjct: 218 QVLTAITPALAGQTISLIKDTSIISLISIQELTFVGSEIANSSGLIFEIWLIVGAAYLVL 277 Query: 378 SIMIALFMNRLNAK 391 + +++ ++ + Sbjct: 278 CLSLSMLFKQVEKR 291 >gi|229588543|ref|YP_002870662.1| putative amino acid ABC transporter membrane protein [Pseudomonas fluorescens SBW25] gi|229360409|emb|CAY47266.1| putative amino acid ABC transport system, membrane protein [Pseudomonas fluorescens SBW25] Length = 365 Score = 76.3 bits (186), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 33/81 (40%), Positives = 59/81 (72%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I + + +A++AE+VR GL A+P+GQ EAA A+GL + ++ LV+LPQA++ +IP + + Sbjct: 235 IGVILFQSAYVAEVVRGGLQAIPKGQYEAAAAMGLGYWRSMGLVILPQALKMVIPGIVNT 294 Query: 331 YLNLLKNSSLAVAVGFADLVS 351 ++ L K++SL + +G DL++ Sbjct: 295 FIALFKDTSLVIIIGLFDLLN 315 >gi|288958133|ref|YP_003448474.1| general L-amino acid transport system permease protein [Azospirillum sp. B510] gi|288910441|dbj|BAI71930.1| general L-amino acid transport system permease protein [Azospirillum sp. B510] Length = 368 Score = 76.3 bits (186), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 53/159 (33%), Positives = 86/159 (54%), Gaps = 15/159 (9%) Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252 +F L I+L+L R + K L + YI LI G+P LI+L + P+ Sbjct: 175 AFPLSILLAL-----GRRSNMPAVKVLCVTYIE--LIRGVP---LISLLFMASVMLPL-- 222 Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312 F+ + + IA + AA++AE +R GL A+P+GQ EAA LGL++ + R Sbjct: 223 ---FLPNGVSIDKLLRAQIAFILFAAAYMAEAIRGGLQAIPKGQYEAADGLGLSYWQKMR 279 Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 ++LPQA+ IPPL + +++ K++SL + +G DL+ Sbjct: 280 KIVLPQALAVAIPPLVNTFISFFKDTSLVIIIGLYDLLG 318 >gi|242237676|ref|YP_002985857.1| polar amino acid ABC transporter inner membrane subunit [Dickeya dadantii Ech703] gi|242129733|gb|ACS84035.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya dadantii Ech703] Length = 223 Score = 76.3 bits (186), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 63/207 (30%), Positives = 113/207 (54%), Gaps = 15/207 (7%) Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251 F+ VLG++L+L R SR L LYIS F G+P+LV + + ++F P L Sbjct: 32 FAIVLGLILAL--IRESRLL---VVAKLVELYISLFR--GIPSLVQL---FIIYFGLPQL 81 Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311 F + G + + I S +A++AEI R+ L +V GQ EA +++G++ + Sbjct: 82 --FPALNGLSA---MAAAIIGFSLKNSAYMAEIFRAALASVDFGQTEAGLSVGMSRVQIY 136 Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371 R ++LPQAM + +P + +++L+K++S+A A+G ++L + G I ++ + E L+ Sbjct: 137 RRIVLPQAMLNALPATGNTFISLIKDTSVAFALGVSELFAEGKMIAAESLRFFETFLVVG 196 Query: 372 FIYLSLSIMIALFMNRLNAKIALKEKK 398 IY + I + F RL K++ ++ Sbjct: 197 LIYWLVIIAYSWFQTRLEKKLSHSRQR 223 >gi|163740276|ref|ZP_02147670.1| ABC glutamate/glutamine/aspartate/asparagine transporter, inner membrane subunit BztC [Phaeobacter gallaeciensis 2.10] gi|161386134|gb|EDQ10509.1| ABC glutamate/glutamine/aspartate/asparagine transporter, inner membrane subunit BztC [Phaeobacter gallaeciensis 2.10] Length = 432 Score = 76.3 bits (186), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 44/132 (33%), Positives = 80/132 (60%), Gaps = 4/132 (3%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+ + I ++ ++AA+IAE++R GL A+P+GQ EAA +LGL + +A RL++LPQA++ IP Sbjct: 297 FLRVVIMITLFSAAYIAEVIRGGLAALPKGQYEAADSLGLDYPQAMRLIILPQALKISIP 356 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVS-VGGTIINQT---GQAIEIILIWMFIYLSLSIMI 381 + + + L K+++L + DLV + G I+ T G E++ F++ + I Sbjct: 357 GIVNVAVGLFKDTTLVSVISMFDLVGMIRGPILASTEWNGVYWELLGFAAFLFFIVCYGI 416 Query: 382 ALFMNRLNAKIA 393 + + L ++A Sbjct: 417 SQYSQWLERRLA 428 Score = 38.1 bits (87), Expect = 2.2, Method: Compositional matrix adjust. Identities = 30/102 (29%), Positives = 51/102 (50%), Gaps = 9/102 (8%) Query: 68 AGFEIDQGIVPYTSDSSYATAI----LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK 123 GF I +G SD++ +A+ L GF+ L + + + +G + GR S Sbjct: 200 GGFLIPEG----ASDNAMLSAVPSRDLGGFMLNMMLGVTCVSLSVPLGIALALGRQSNMP 255 Query: 124 LVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVL 165 L+ WIC V++E R + PL+ + F+ +LS PD ++ L Sbjct: 256 LIKWICVVFIEFVRGV-PLITLLFVASVMLSYFFPPDATVDL 296 >gi|153010841|ref|YP_001372055.1| polar amino acid ABC transporter, inner membrane subunit [Ochrobactrum anthropi ATCC 49188] gi|151562729|gb|ABS16226.1| polar amino acid ABC transporter, inner membrane subunit [Ochrobactrum anthropi ATCC 49188] Length = 239 Score = 76.3 bits (186), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 60/201 (29%), Positives = 112/201 (55%), Gaps = 9/201 (4%) Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240 LT+ A VF +L ++ +L RLS K + LY+ F+ G P LV I + Sbjct: 19 LTLKLAATSIVFGAILALLFALM--RLS---GIKVLDWIARLYV--FVFRGTPLLVQIFI 71 Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300 Y P + +++F+ P + ++ IAL+ AA+ +EI+R GL++VP GQ+EAA Sbjct: 72 IYYGLSQFPAI-RYSFLWPVLREPYWCAI-IALTLNNAAYASEIIRGGLLSVPHGQIEAA 129 Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 A G++ R +++P A+R +P ++ ++++K +SLA + ++ + +I ++ Sbjct: 130 KACGMSSFTCFRRIVMPLAVRQALPGYGNEMISMIKATSLASIITLMEVTGIAAKLIAES 189 Query: 361 GQAIEIILIWMFIYLSLSIMI 381 +AIEI +I IYL+++ ++ Sbjct: 190 YRAIEIFVIAGAIYLAINFVL 210 Score = 42.0 bits (97), Expect = 0.15, Method: Compositional matrix adjust. Identities = 28/71 (39%), Positives = 38/71 (53%), Gaps = 1/71 (1%) Query: 96 TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSV 155 T LA + ++ I+ L RLS K++ WI R+YV VFR P LV IF +Y LS Sbjct: 20 TLKLAATSIVFGAILALLFALMRLSGIKVLDWIARLYVFVFRGTPLLVQIFIIYYG-LSQ 78 Query: 156 LPIPDHSIVLP 166 P +S + P Sbjct: 79 FPAIRYSFLWP 89 >gi|326692920|ref|ZP_08229925.1| ABC-type amino acid transport system, permease component [Leuconostoc argentinum KCTC 3773] Length = 219 Score = 76.3 bits (186), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 55/178 (30%), Positives = 92/178 (51%), Gaps = 25/178 (14%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 + LPLL I F+ F LP K +H F + IA+S + Sbjct: 66 RNLPLLLIIFFVYFALP-------KIGIHLSV-----------------FWATIIAMSTF 101 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 +A +AEIVR GL +V GQ E A A GL++ + ++LPQA + +IPP+ SQ ++L+K Sbjct: 102 ESAMLAEIVRGGLESVDIGQFEGARANGLSNMQTMIYIILPQAYKKMIPPIISQLISLVK 161 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQ-AIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393 ++SLA+ + A+L+ G + Q I ++++ +Y L+ ++L + K+A Sbjct: 162 DTSLAMGIVLAELMYRGQIVYAQNSTYIIPVLIVITLVYFVLNYGLSLVARWADRKLA 219 >gi|307727658|ref|YP_003910871.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia sp. CCGE1003] gi|307588183|gb|ADN61580.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. CCGE1003] Length = 251 Score = 76.3 bits (186), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 47/147 (31%), Positives = 83/147 (56%), Gaps = 4/147 (2%) Query: 251 LGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306 +GQF I S + P ++ ++L+ TA + AEI+R GL+AVP GQ+EA ++GL+ Sbjct: 78 MGQFGVIRESFLWPVLREPYLCAVLSLALCTAGYTAEIIRGGLMAVPAGQIEAGYSIGLS 137 Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 R V+ P A+R +P +++ + L+K+++LA V ++ V II QT + E+ Sbjct: 138 GFALLRRVIGPIALRQCLPAYSTEAVLLVKSTALASLVTVWEVTGVAQQIIQQTYRTTEV 197 Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIA 393 + IYL L+ +I + L +++ Sbjct: 198 FICAALIYLFLNFVIVRALGLLETRLS 224 >gi|228476498|ref|ZP_04061188.1| ABC transporter, permease protein [Streptococcus salivarius SK126] gi|228251919|gb|EEK10965.1| ABC transporter, permease protein [Streptococcus salivarius SK126] Length = 515 Score = 76.3 bits (186), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 38/109 (34%), Positives = 66/109 (60%) Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 +S T A+++EIVR G+ AV +GQ EAA ALG TH + R ++LPQ +R+I+P ++++ Sbjct: 385 VSINTGAYMSEIVRGGIFAVDKGQFEAATALGFTHGQTMRKIVLPQVIRNILPATGNEFV 444 Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 +K++S+ + +L G T+ +QT Q + + IY L+ + Sbjct: 445 INIKDTSVLNVISVVELYFAGNTVASQTYQYFQTFFVIAAIYFVLTFTV 493 Score = 36.2 bits (82), Expect = 9.1, Method: Compositional matrix adjust. Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 10/64 (15%) Query: 96 TFWLAFSGMIPATIIGTLVGAGRLS---ANKLVA-------WICRVYVEVFRNIPPLVVI 145 T ++ G + T IG ++G R + ANK VA W+ VY+EVFR P +V Sbjct: 301 TLLISIIGTVVGTFIGLMIGVYRTAPKAANKFVALLQKLFGWVLNVYIEVFRGTPMIVQS 360 Query: 146 FFLY 149 +Y Sbjct: 361 MVIY 364 >gi|163739483|ref|ZP_02146893.1| amino acid ABC transporter, permease protein [Phaeobacter gallaeciensis BS107] gi|161387236|gb|EDQ11595.1| amino acid ABC transporter, permease protein [Phaeobacter gallaeciensis BS107] Length = 432 Score = 76.3 bits (186), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 44/132 (33%), Positives = 80/132 (60%), Gaps = 4/132 (3%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+ + I ++ ++AA+IAE++R GL A+P+GQ EAA +LGL + +A RL++LPQA++ IP Sbjct: 297 FLRVVIMITLFSAAYIAEVIRGGLAALPKGQYEAADSLGLDYPQAMRLIILPQALKISIP 356 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVS-VGGTIINQT---GQAIEIILIWMFIYLSLSIMI 381 + + + L K+++L + DLV + G I+ T G E++ F++ + I Sbjct: 357 GIVNVAVGLFKDTTLVSVISMFDLVGMIRGPILASTEWNGVYWELLGFAAFLFFIVCYGI 416 Query: 382 ALFMNRLNAKIA 393 + + L ++A Sbjct: 417 SQYSQWLERRLA 428 Score = 38.5 bits (88), Expect = 2.0, Method: Compositional matrix adjust. Identities = 30/102 (29%), Positives = 51/102 (50%), Gaps = 9/102 (8%) Query: 68 AGFEIDQGIVPYTSDSSYATAI----LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK 123 GF I +G SD++ +A+ L GF+ L + + + +G + GR S Sbjct: 200 GGFLIPEG----ASDNAMLSAVPSRDLGGFMLNMMLGVTCVSLSVPLGIALALGRQSNMP 255 Query: 124 LVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVL 165 L+ WIC V++E R + PL+ + F+ +LS PD ++ L Sbjct: 256 LIKWICVVFIEFVRGV-PLITLLFVASVMLSYFFPPDATVDL 296 >gi|268678765|ref|YP_003303196.1| polar amino acid ABC transporter inner membrane subunit [Sulfurospirillum deleyianum DSM 6946] gi|268616796|gb|ACZ11161.1| polar amino acid ABC transporter, inner membrane subunit [Sulfurospirillum deleyianum DSM 6946] Length = 321 Score = 76.3 bits (186), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 57/213 (26%), Positives = 109/213 (51%), Gaps = 21/213 (9%) Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240 +T++ + + +F +G +L+ R+S H + K + +YI+ +I G P LV I + Sbjct: 123 VTLEISGLAAILAFSMGALLAFM--RIS---HYQFLKDIATIYIA--IIRGTPLLVQIFI 175 Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPE-FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299 F FI + E F + I+L + A+IAE++R + ++ +GQ EA Sbjct: 176 -------------FYFIIATIFEIERFFAGAISLGLFFGAYIAEVLRGAIQSIDKGQYEA 222 Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359 A +LG+ + + +++PQA++ +P L + + L+K+SSL + DL VG I+ Sbjct: 223 AKSLGMNYPQTMLYIIMPQALKRALPTLVGEMIALVKDSSLVSVISITDLTKVGREIVAN 282 Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 T E LI +Y ++ ++ F +++ K+ Sbjct: 283 TFSPFETWLIIAAVYFMITFLLTAFGHKIETKM 315 >gi|330811532|ref|YP_004355994.1| Putative amino acid ABC transporter, permease component [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327379640|gb|AEA70990.1| Putative amino acid ABC transporter, permease component [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 365 Score = 76.3 bits (186), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 34/81 (41%), Positives = 59/81 (72%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I + + +A+IAE+VR GL A+P+GQ EAA A+GL + ++ LV+LPQA++ +IP + + Sbjct: 235 IGVILFQSAYIAEVVRGGLQAIPKGQYEAAAAMGLGYWRSMGLVILPQALKLVIPGIVNT 294 Query: 331 YLNLLKNSSLAVAVGFADLVS 351 ++ L K++SL + +G DL++ Sbjct: 295 FIALFKDTSLVIIIGLFDLLN 315 >gi|323174568|gb|EFZ60189.1| L-cystine transport system permease protein tcyB [Escherichia coli LT-68] Length = 222 Score = 76.3 bits (186), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 62/207 (29%), Positives = 109/207 (52%), Gaps = 18/207 (8%) Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251 F +LG +L+L RLS + + L YIS F G P LIA + +++ P Sbjct: 32 FGLLLGFILALM--RLSPIWPVRW---LARFYISIFR--GTP---LIAQLFMIYYGLP-- 79 Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311 QF G + P S I LS TAA+ AE +R+ + ++ +GQ EAA ++G+T + Sbjct: 80 -QF----GIELDP-IPSAMIGLSLNTAAYAAETLRAAISSIDKGQWEAAASIGMTPWQIM 133 Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371 R +LPQA R +PPL++ +++L+K++SLA + +L I ++T + + L Sbjct: 134 RRAILPQAARVALPPLSNSFISLVKDTSLAATIQVPELFRQAQLITSRTLEVFTMYLAAS 193 Query: 372 FIYLSLSIMIALFMNRLNAKIALKEKK 398 IY ++ +++ N ++ +E++ Sbjct: 194 LIYWIMATVLSTLQNHFENQLNRQERE 220 Score = 37.0 bits (84), Expect = 6.0, Method: Compositional matrix adjust. Identities = 28/97 (28%), Positives = 45/97 (46%), Gaps = 8/97 (8%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G T L+ GM ++G ++ RLS V W+ R Y+ +FR P + +F + Sbjct: 15 LLKGAGYTLQLSIGGMFFGLLLGFILALMRLSPIWPVRWLARFYISIFRGTPLIAQLFMI 74 Query: 149 YKSV----LSVLPIPDHSIVLPFGMFLNNRGLSFPTL 181 Y + + + PIP I G+ LN + TL Sbjct: 75 YYGLPQFGIELDPIPSAMI----GLSLNTAAYAAETL 107 >gi|197333922|ref|YP_002154779.1| cystine transport system permease protein [Vibrio fischeri MJ11] gi|197315412|gb|ACH64859.1| cystine transport system permease protein [Vibrio fischeri MJ11] Length = 223 Score = 76.3 bits (186), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 57/171 (33%), Positives = 95/171 (55%), Gaps = 17/171 (9%) Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV-LIAL 240 TM+ +FS +L +VL+ R F L LYIS F G P LV L L Sbjct: 22 TMEMALWGLLFSLILALVLANL-----RVFKVPVFDQLSQLYISFFR--GTPLLVQLFLL 74 Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300 Y L P+ F+G F + I L+ + AA++AE +R+ +I + R QMEA+ Sbjct: 75 YYGLPQVFPI-----FVGLDA----FSAAVIGLTLHFAAYMAESIRAAIIGIDRSQMEAS 125 Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 +++G+T +A R ++LPQA R +P L + +++++K++SLA +G A++++ Sbjct: 126 LSIGMTTSQAMRRIILPQATRVALPSLMNYFIDMIKSTSLAFTLGVAEIMA 176 >gi|258541026|ref|YP_003175525.1| amino acid ABC transporter substrate-binding protein [Lactobacillus rhamnosus Lc 705] gi|257152702|emb|CAR91674.1| ABC transporter, amino acid-binding protein [Lactobacillus rhamnosus Lc 705] gi|259651105|dbj|BAI43267.1| amino acid ABC transporter permease component [Lactobacillus rhamnosus GG] Length = 535 Score = 75.9 bits (185), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 42/110 (38%), Positives = 70/110 (63%) Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 +S T A+I+EI+R G+I+V GQ EAA ALG+TH + V+LPQA+R+ +P +T++++ Sbjct: 390 VSINTGAYISEIIRGGIISVDEGQFEAANALGMTHLQTMMKVILPQAVRNSLPAVTNEFI 449 Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382 +K++S+ + ++L G TI Q+ Q LI IYL ++ I+ Sbjct: 450 VNIKDTSVLSVISVSELFFSGETIAGQSFQFFHTYLIVSGIYLIMTFTIS 499 >gi|226948691|ref|YP_002803782.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Clostridium botulinum A2 str. Kyoto] gi|226844167|gb|ACO86833.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Clostridium botulinum A2 str. Kyoto] Length = 219 Score = 75.9 bits (185), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 39/124 (31%), Positives = 73/124 (58%), Gaps = 3/124 (2%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I L+ AA+++EI+R+ +I++ RGQ EA +LG T + ++LPQA++ +PPL + Sbjct: 94 IGLALNGAAYMSEIIRAAIISIDRGQEEAGFSLGYTRFQNLHYIILPQAVKISVPPLVNG 153 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL---FMNR 387 + +LLK++SL + +L G I ++T + E+ L Y L+ ++++ F+ + Sbjct: 154 FSSLLKDTSLVSVISITELTRSGNLIYSRTAKPFEVYLTLGLFYFVLTYIVSICSKFIEK 213 Query: 388 LNAK 391 N K Sbjct: 214 RNEK 217 >gi|206563319|ref|YP_002234082.1| ABC transporter permease [Burkholderia cenocepacia J2315] gi|198039359|emb|CAR55324.1| ABC transporter, permease protein [Burkholderia cenocepacia J2315] Length = 218 Score = 75.9 bits (185), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 71/218 (32%), Positives = 115/218 (52%), Gaps = 22/218 (10%) Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL--IFGLPTLVLI 238 +T++ A FV S VLG++L+L ++SR+ T ST + I GLP +V + Sbjct: 19 VTIEITACAFVLSSVLGLILALL--KVSRNRAVSTAG-------STIVNVIRGLPIIVQL 69 Query: 239 ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQME 298 + ++F P LG + S + L IA S Y A E R+G+ A+ RGQ+E Sbjct: 70 ---FYMYFVLPDLG----VQLSAFQAGVLGLGIAYSAYQA----ENFRAGIEAIDRGQIE 118 Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN 358 AA A+G+ R V+LPQA R +PP + + LLK+SS+A + A++ G I + Sbjct: 119 AAHAIGMRGPMIMRRVVLPQAFRIALPPYGNTLVMLLKDSSVASTITVAEITRAGQLIAS 178 Query: 359 QTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 T Q + + + +YL+L + + +NRL ++AL+ Sbjct: 179 STFQNMSVYTLVALLYLALGLPLMFGVNRLGKRLALRR 216 >gi|254284661|ref|ZP_04959628.1| amino acid ABC transporter, permease protein [Vibrio cholerae AM-19226] gi|150425446|gb|EDN17222.1| amino acid ABC transporter, permease protein [Vibrio cholerae AM-19226] Length = 298 Score = 75.9 bits (185), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 44/134 (32%), Positives = 75/134 (55%) Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317 G + + +S + + ++A+IAEIVR+GL +P+GQ EAA +LGL R V+ P Sbjct: 158 GPARLWENLLSGVLCIGLLSSAYIAEIVRAGLANIPQGQWEAADSLGLPTWVKYRYVIAP 217 Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377 Q + +I P L Q ++L+K++S+ + +L VG I N +G EI LI YL L Sbjct: 218 QVLTAITPALAGQTISLIKDTSIISLISIQELTFVGSEIANSSGLIFEIWLIVGAAYLVL 277 Query: 378 SIMIALFMNRLNAK 391 + +++ ++ + Sbjct: 278 CLSLSMLFKQVEKR 291 >gi|107028495|ref|YP_625590.1| amino acid ABC transporter permease [Burkholderia cenocepacia AU 1054] gi|116686491|ref|YP_839738.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia cenocepacia HI2424] gi|105897659|gb|ABF80617.1| amino acid ABC transporter membrane protein 2, PAAT family [Burkholderia cenocepacia AU 1054] gi|116652206|gb|ABK12845.1| amino acid ABC transporter membrane protein 2, PAAT family [Burkholderia cenocepacia HI2424] Length = 248 Score = 75.9 bits (185), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 48/147 (32%), Positives = 82/147 (55%), Gaps = 4/147 (2%) Query: 251 LGQFNFIGGSTVSPEFMSLYI----ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306 LGQF I S + P Y+ +L+ TA + AEI+R GL+AVP GQ+EA ++GL+ Sbjct: 78 LGQFGVIRESFMWPLLREPYVCAVLSLALCTAGYTAEILRGGLMAVPVGQIEAGYSIGLS 137 Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 R V+ P A+R +P +++ + L+K+++LA V ++ V II QT + E+ Sbjct: 138 GFSLLRRVIGPIALRQCLPAYSTEAVLLVKSTALASLVTVWEVTGVAQQIIQQTYRTTEV 197 Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIA 393 + IYL L+ ++ + L +++ Sbjct: 198 FVCAAIIYLGLNFIVVRVLGALEWRLS 224 >gi|317405102|gb|EFV85448.1| amino acids ABC transporter [Achromobacter xylosoxidans C54] Length = 229 Score = 75.9 bits (185), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 45/119 (37%), Positives = 74/119 (62%), Gaps = 10/119 (8%) Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290 G+P L+LI Y F P L G +S F +L AL Y +A+++E++RSG+ Sbjct: 70 GMPLLMLIFWAY---FVIPKLT------GQVIS-GFWTLIAALVVYESAYLSEVIRSGIE 119 Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349 AVPRGQ+EA+ +LG+ + R V+LPQA+ +++P +TSQ+++ +K +SL + +L Sbjct: 120 AVPRGQIEASRSLGVGYWTTMRRVVLPQALFNVLPSMTSQFVSTIKETSLGYVISVNEL 178 >gi|254475047|ref|ZP_05088433.1| amino acid ABC transporter, permease protein [Ruegeria sp. R11] gi|214029290|gb|EEB70125.1| amino acid ABC transporter, permease protein [Ruegeria sp. R11] Length = 440 Score = 75.9 bits (185), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 43/136 (31%), Positives = 81/136 (59%), Gaps = 4/136 (2%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+ + I ++ +++A+IAE++R GL A+P+GQ EAA +LGL + +A RL++LPQA++ IP Sbjct: 305 FLRVVIMITLFSSAYIAEVIRGGLAALPKGQYEAADSLGLDYPQAMRLIILPQALKISIP 364 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVS-VGGTIINQT---GQAIEIILIWMFIYLSLSIMI 381 + + + L K+++L + DLV + G I+ T G E++ F++ + I Sbjct: 365 GIVNVAVGLFKDTTLVSVISMFDLVGMIRGPILASTEWNGVYWELLGFAAFLFFVVCYGI 424 Query: 382 ALFMNRLNAKIALKEK 397 + + L ++A + Sbjct: 425 SQYSQWLERRLATDHR 440 Score = 37.4 bits (85), Expect = 4.0, Method: Compositional matrix adjust. Identities = 27/98 (27%), Positives = 46/98 (46%), Gaps = 1/98 (1%) Query: 68 AGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAW 127 GF I +G + + L GF+ L + + + +G + GR S L+ W Sbjct: 208 GGFLIPEGASENAMLEAVPSRDLGGFMLNMMLGVTCVSLSVPLGIALALGRQSTMPLIKW 267 Query: 128 ICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVL 165 IC V++E R + PL+ + F+ +LS PD ++ L Sbjct: 268 ICVVFIEFVRGV-PLITLLFVASVMLSYFFPPDATVDL 304 >gi|71734056|ref|YP_274851.1| amino acid ABC transporter permease [Pseudomonas syringae pv. phaseolicola 1448A] gi|71554609|gb|AAZ33820.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. phaseolicola 1448A] Length = 220 Score = 75.9 bits (185), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 48/164 (29%), Positives = 91/164 (55%), Gaps = 11/164 (6%) Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292 P LVLI L Y F P LG I ++P + LS Y A++ E+ R+GL+++ Sbjct: 68 PILVLILLIY---FALPGLG----IRLDKLAP----FIVTLSLYAGAYLTEVFRAGLLSI 116 Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352 +GQ EA +A+GL + +++P +R+++P L++ +++L K++SLA A+ +L Sbjct: 117 HKGQREAGLAIGLGEWQVRAYIIVPVMLRNVLPALSNNFISLFKDTSLAAAIAVPELTYY 176 Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 I ++ + IE L+ +Y+ +IA+ + L ++A++ Sbjct: 177 ARKINVESYRVIETWLVTTALYVVACYVIAMLLRTLEQRLAIRR 220 >gi|116496256|ref|YP_807990.1| amino acid ABC transporter periplasmic protein [Lactobacillus casei ATCC 334] gi|191639782|ref|YP_001988948.1| Amino acid ABC transporter, amino acid-binding protein/permease protein [Lactobacillus casei BL23] gi|227532749|ref|ZP_03962798.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|116106406|gb|ABJ71548.1| amino acid ABC transporter substrate-binding protein, PAAT family / amino acid ABC transporter membrane protein, PAAT family [Lactobacillus casei ATCC 334] gi|190714084|emb|CAQ68090.1| Amino acid ABC transporter, amino acid-binding protein/permease protein [Lactobacillus casei BL23] gi|227189583|gb|EEI69650.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus paracasei subsp. paracasei ATCC 25302] Length = 532 Score = 75.9 bits (185), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 42/110 (38%), Positives = 70/110 (63%) Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 +S T A+I+EI+R G+I+V GQ EAA ALG+TH + V+LPQA+R+ +P +T++++ Sbjct: 387 VSINTGAYISEIIRGGIISVDEGQFEAANALGMTHLQTMMKVILPQAVRNSLPAVTNEFI 446 Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382 +K++S+ + ++L G TI Q+ Q LI IYL ++ I+ Sbjct: 447 VNIKDTSVLSVISVSELFFSGETIAGQSFQFFHTYLIVSAIYLIMTFTIS 496 >gi|331270072|ref|YP_004396564.1| amino acid ABC transporter permease [Clostridium botulinum BKT015925] gi|329126622|gb|AEB76567.1| amino acid ABC transporter, permease component [Clostridium botulinum BKT015925] Length = 215 Score = 75.9 bits (185), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 37/124 (29%), Positives = 78/124 (62%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I LS + A+++EI+R G+I++ +GQ EA +LG T+ +A V+LPQ R I+P + ++ Sbjct: 91 IGLSLNSGAYMSEIIRGGIISIDKGQFEACKSLGFTNLQAMTRVILPQTFRIILPSVGNE 150 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++ +LK++SL A+ +L+ ++ +G+ +E +I +YL ++ + ++ + L Sbjct: 151 FITMLKDTSLVSAITMEELMRNAELQMSASGRPVEPFIIAAVLYLLMTTVFSVIFSLLEK 210 Query: 391 KIAL 394 K+++ Sbjct: 211 KMSM 214 >gi|303230413|ref|ZP_07317174.1| ABC transporter, permease protein [Veillonella atypica ACS-049-V-Sch6] gi|302514952|gb|EFL56933.1| ABC transporter, permease protein [Veillonella atypica ACS-049-V-Sch6] Length = 218 Score = 75.9 bits (185), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 37/120 (30%), Positives = 69/120 (57%), Gaps = 1/120 (0%) Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 AA++ EI R G+ ++PRGQ E A LG T+ + R ++LPQ + ++PPL ++ +NLLK+ Sbjct: 100 AAYLCEIFRGGIQSIPRGQYEGAKVLGFTYGQTMRTIILPQMFKRVLPPLANETINLLKD 159 Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 +SL + D++ + +I+ Q I L+ YL + ++ N L + ++ ++ Sbjct: 160 TSLVYVLAMNDILRITKSIV-QRDFDISAFLVAAIFYLIFTFILTNIFNYLEKRFSVYDE 218 >gi|170735091|ref|YP_001774205.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia cenocepacia MC0-3] gi|169821129|gb|ACA95710.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia cenocepacia MC0-3] Length = 248 Score = 75.9 bits (185), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 48/147 (32%), Positives = 82/147 (55%), Gaps = 4/147 (2%) Query: 251 LGQFNFIGGSTVSPEFMSLYI----ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306 LGQF I S + P Y+ +L+ TA + AEI+R GL+AVP GQ+EA ++GL+ Sbjct: 78 LGQFGVIRESFMWPLLREPYVCAVLSLALCTAGYTAEILRGGLMAVPVGQIEAGYSIGLS 137 Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 R V+ P A+R +P +++ + L+K+++LA V ++ V II QT + E+ Sbjct: 138 GFSLLRRVIGPIALRQCLPAYSTEAVLLVKSTALASLVTVWEVTGVAQQIIQQTYRTTEV 197 Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIA 393 + IYL L+ ++ + L +++ Sbjct: 198 FVCAAIIYLGLNFIVVRVLGALEWRLS 224 >gi|2961078|gb|AAC05642.1| unknown [Pseudomonas marginalis pv. alfalfae] Length = 365 Score = 75.9 bits (185), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 33/81 (40%), Positives = 59/81 (72%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I + + +A++AE+VR GL A+P+GQ EAA A+GL + ++ LV+LPQA++ +IP + + Sbjct: 235 IGVILFQSAYVAEVVRGGLQAIPKGQYEAAAAMGLGYWRSMGLVILPQALKMVIPGIVNT 294 Query: 331 YLNLLKNSSLAVAVGFADLVS 351 ++ L K++SL + +G DL++ Sbjct: 295 FIALFKDTSLVIIIGLFDLLN 315 >gi|329297839|ref|ZP_08255175.1| glutamine ABC transporter permease protein [Plautia stali symbiont] Length = 218 Score = 75.9 bits (185), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 56/196 (28%), Positives = 104/196 (53%), Gaps = 13/196 (6%) Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256 G ++ L A R K K L L+++ LI G P +V + Y F P++ Sbjct: 33 GFIIGLLAGT-CRALGGKIAKTLSLIFVE--LIRGTPIMVQVMFIY---FALPMVLPIRI 86 Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316 V+ +++ I ++A+IAEI R ++++ RG EA++A+GL+ R V++ Sbjct: 87 ---DPVTAAIVTIVIN----SSAYIAEITRGAILSINRGFKEASLAMGLSQRGTLWYVIM 139 Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376 P A+R +IP L +Q++ +K++SL + +G A+L G II +A+E+ IYL Sbjct: 140 PLALRRMIPALGNQWIISIKDTSLFIVIGVAELTRQGQEIIAGNFRALEVWTAVAMIYLL 199 Query: 377 LSIMIALFMNRLNAKI 392 +++ ++ + +L +I Sbjct: 200 VTLCLSFLLKQLEKRI 215 Score = 37.7 bits (86), Expect = 3.4, Method: Compositional matrix adjust. Identities = 20/60 (33%), Positives = 34/60 (56%) Query: 99 LAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPI 158 ++ SG++ IIG L G R K+ + ++VE+ R P +V + F+Y ++ VLPI Sbjct: 25 ISLSGLLGGFIIGLLAGTCRALGGKIAKTLSLIFVELIRGTPIMVQVMFIYFALPMVLPI 84 >gi|239630711|ref|ZP_04673742.1| ABC-type amino acid transport/signal transduction system [Lactobacillus paracasei subsp. paracasei 8700:2] gi|301067862|ref|YP_003789885.1| amino acid ABC transporter/signal transduction system periplasmic protein [Lactobacillus casei str. Zhang] gi|239526994|gb|EEQ65995.1| ABC-type amino acid transport/signal transduction system [Lactobacillus paracasei subsp. paracasei 8700:2] gi|300440269|gb|ADK20035.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Lactobacillus casei str. Zhang] gi|327383896|gb|AEA55372.1| Amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus casei LC2W] gi|327387077|gb|AEA58551.1| Amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus casei BD-II] Length = 535 Score = 75.9 bits (185), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 42/110 (38%), Positives = 70/110 (63%) Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 +S T A+I+EI+R G+I+V GQ EAA ALG+TH + V+LPQA+R+ +P +T++++ Sbjct: 390 VSINTGAYISEIIRGGIISVDEGQFEAANALGMTHLQTMMKVILPQAVRNSLPAVTNEFI 449 Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382 +K++S+ + ++L G TI Q+ Q LI IYL ++ I+ Sbjct: 450 VNIKDTSVLSVISVSELFFSGETIAGQSFQFFHTYLIVSAIYLIMTFTIS 499 >gi|168186416|ref|ZP_02621051.1| amino acid ABC transporter, permease component [Clostridium botulinum C str. Eklund] gi|169295523|gb|EDS77656.1| amino acid ABC transporter, permease component [Clostridium botulinum C str. Eklund] Length = 215 Score = 75.9 bits (185), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 42/128 (32%), Positives = 76/128 (59%), Gaps = 7/128 (5%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I LS + A+++EI+R G++++ +GQ EA +LG T+ + V+LPQA R I+P + ++ Sbjct: 91 IGLSLNSGAYMSEIIRGGIVSIDKGQFEACKSLGFTNIQTMTKVILPQAFRVILPSVGNE 150 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++ +LK++SL A+ +L+ ++ TG +E LI +YL +M +F N Sbjct: 151 FITMLKDTSLVSAITMEELMRNAQLQMSSTGSPVEPFLIAGLLYL---LMTTVF----NV 203 Query: 391 KIALKEKK 398 +L EK+ Sbjct: 204 IFSLTEKR 211 Score = 40.0 bits (92), Expect = 0.71, Method: Compositional matrix adjust. Identities = 23/61 (37%), Positives = 33/61 (54%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G V T L +I +IIG +V +LS NK+V +I Y +FR P + +FF Sbjct: 13 LLKGSVITIELTVISVILGSIIGVIVAGLKLSNNKIVVYIVSFYTWIFRGTPMFLQLFFF 72 Query: 149 Y 149 Y Sbjct: 73 Y 73 >gi|154174248|ref|YP_001407878.1| His/Glu/Gln/Arg/opine ABC transporter permease [Campylobacter curvus 525.92] gi|112803416|gb|EAU00760.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Campylobacter curvus 525.92] Length = 236 Score = 75.9 bits (185), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 40/105 (38%), Positives = 72/105 (68%), Gaps = 5/105 (4%) Query: 260 STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319 +T S F IAL ++A++AEIVRSG+ +V +GQMEAA A+GL++ + R ++ PQA Sbjct: 101 ATWSDNFYVAVIALGLNSSAYVAEIVRSGINSVDKGQMEAARAMGLSYSASMREIIFPQA 160 Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364 +++I+P L +++++L K +S+ VG+ ++ + T +++ QAI Sbjct: 161 IKNILPALGNEFISLFKETSV---VGYISVMDI--TFQSKSFQAI 200 >gi|327331111|gb|EGE72851.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Propionibacterium acnes HL097PA1] Length = 314 Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 57/154 (37%), Positives = 81/154 (52%), Gaps = 5/154 (3%) Query: 224 ISTFLIF-GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282 + T L+F GL ++ L + F P Q I V + I L A++A Sbjct: 112 VYTQLVFWGLLAVLYPTLSIGVPFSGP---QLASIETKKVVTALAAAIIGLGLNEGAYLA 168 Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342 EI+RSGL +V GQ EAA ALG+ R V++PQAMR IIPPL ++ + +LK +SL + Sbjct: 169 EIIRSGLESVDAGQSEAAKALGMKPSLIMRRVIIPQAMRVIIPPLGNETIGMLKTTSLVL 228 Query: 343 AVGFA-DLVSVGGTIINQTGQAIEIILIWMFIYL 375 AV F DL I N+ I ++++ F YL Sbjct: 229 AVPFTLDLQYATSAIANRIYAPIPLLIVAAFWYL 262 >gi|167036207|ref|YP_001671438.1| polar amino acid ABC transporter inner membrane subunit [Pseudomonas putida GB-1] gi|166862695|gb|ABZ01103.1| polar amino acid ABC transporter, inner membrane subunit [Pseudomonas putida GB-1] Length = 219 Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 37/103 (35%), Positives = 63/103 (61%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P F + L+ + A+ + E+VR L ++PRGQ EA +++GL + VLLPQA++ + Sbjct: 88 PSFWCAVLVLALWGASEVGEVVRGALRSLPRGQREAGLSIGLAGWQLYGYVLLPQALKRM 147 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 PP + Y ++K SSLAV +G +++ G II +T +++ I Sbjct: 148 TPPTINIYTRIIKTSSLAVLIGVVEVIKAGQQIIERTYESVLI 190 >gi|90419551|ref|ZP_01227461.1| amino acid ABC transporter, permease protein [Aurantimonas manganoxydans SI85-9A1] gi|90336488|gb|EAS50229.1| amino acid ABC transporter, permease protein [Aurantimonas manganoxydans SI85-9A1] Length = 499 Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 31/87 (35%), Positives = 60/87 (68%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 + + + ++ ++AA++AE++R GL A+P+GQ E A A+ LT+ + R+++LPQA+ +I Sbjct: 361 QLLRALVGVALFSAAYMAEVIRGGLQAIPKGQYEGADAMALTYWQKMRMIILPQALTLVI 420 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVS 351 P + + ++ L K++SL +G ADL+ Sbjct: 421 PGIVNTFIGLFKDTSLVYIIGLADLLG 447 >gi|91789744|ref|YP_550696.1| amino acid ABC transporter permease [Polaromonas sp. JS666] gi|91698969|gb|ABE45798.1| amino acid ABC transporter membrane protein 2, PAAT family [Polaromonas sp. JS666] Length = 222 Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 45/136 (33%), Positives = 79/136 (58%), Gaps = 1/136 (0%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G + E +S I + AA+ +EI+R+G+ ++ RGQ+ A ALG+T+ + RLV+LPQ Sbjct: 86 GRPIGAE-LSAIITFVAFEAAYFSEIMRAGIQSISRGQVHAGQALGMTYGQNMRLVVLPQ 144 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378 A R+++P L +Q + L +++SL A+G DL+ T G+ E L+ +Y + Sbjct: 145 AFRNMVPILLTQTIILFQDTSLVYAIGAYDLLKGLTTAGKIYGRPEEAYLLAAVVYFVMC 204 Query: 379 IMIALFMNRLNAKIAL 394 ++ + +L KIA+ Sbjct: 205 FGLSYVVKQLQNKIAI 220 >gi|37524241|ref|NP_927585.1| hypothetical protein plu0221 [Photorhabdus luminescens subsp. laumondii TTO1] gi|36783664|emb|CAE12516.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii TTO1] Length = 247 Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 42/136 (30%), Positives = 79/136 (58%), Gaps = 1/136 (0%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 PE ++ AL+ T+A++A V++G+IA+ GQ +A ++LG + ++LPQA+R + Sbjct: 94 PEITTVVCALALITSAYLAHGVKAGIIAIGAGQWQAGLSLGFNRWQVLWYIVLPQALRMM 153 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG-QAIEIILIWMFIYLSLSIMIA 382 +P +Q++ L+K++SLA VG A+L + + N++ E+ L IY + + + Sbjct: 154 VPSFINQWIALIKDTSLAYIVGVAELSFLATQVNNRSMVYPTEVFLFVALIYFVMCLALE 213 Query: 383 LFMNRLNAKIALKEKK 398 L N L + L+ +K Sbjct: 214 LTANYLVRRFTLQRRK 229 >gi|309809954|ref|ZP_07703802.1| ABC transporter, permease protein [Lactobacillus iners SPIN 2503V10-D] gi|308169742|gb|EFO71787.1| ABC transporter, permease protein [Lactobacillus iners SPIN 2503V10-D] Length = 422 Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 64/210 (30%), Positives = 110/210 (52%), Gaps = 28/210 (13%) Query: 189 IFVFSFVLGIVLS--LFATRLSRHFHEKTGKALP-LLYISTFLIFGLPTLVLIALKYQLH 245 I +FS ++G++L L RLS H K +P + YI LI G P +V I Y Sbjct: 229 ITIFSVLIGVILGTILALMRLSSHLALK----IPAICYIE--LIRGTPQMVQILFVY--- 279 Query: 246 FDKPVLGQFNFIGGSTVS--PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 F G+ + ++ IA+ + A++AE +RSG+ ++P GQ EAA +L Sbjct: 280 ----------FGIGAIIQNMSALLAGIIAIGLNSGAYVAEDIRSGINSLPVGQAEAARSL 329 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363 GL+ R V++PQA+++I P L ++++ LLK+SSL +G A+ + + T Q Sbjct: 330 GLSKAATYRYVVIPQAIKNIWPALGNEFITLLKDSSLVSIIGVAETMYQTQLVQTSTYQG 389 Query: 364 IEIILIWMFIY----LSLSIMIALFMNRLN 389 + +++ M IY +L+ +++ R+N Sbjct: 390 VFPLVVAMAIYFIMTFTLTRILSYMERRMN 419 >gi|228931858|ref|ZP_04094754.1| Amino acid ABC transproter, permease [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228827838|gb|EEM73576.1| Amino acid ABC transproter, permease [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] Length = 233 Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 47/126 (37%), Positives = 74/126 (58%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IAL+ + A+I EI R + ++ RGQ+EAA +LG+ + A R ++LPQA R IPPL +Q Sbjct: 92 IALAIHNGAYITEIFRGSIQSIDRGQLEAARSLGMPYPLAMRRIVLPQAFRQSIPPLGNQ 151 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++ LK+SSL VG ++L G +I Q ++ +I YL L ++ +N L Sbjct: 152 FIIGLKDSSLVAYVGLSELWGSGLSIAAGNFQQLDTYIIVGLYYLVLVLLFTYLVNLLEK 211 Query: 391 KIALKE 396 ++ KE Sbjct: 212 RLQRKE 217 >gi|221198891|ref|ZP_03571936.1| octopine transport system permease protein OccM [Burkholderia multivorans CGD2M] gi|221205151|ref|ZP_03578167.1| octopine transport system permease protein OccM [Burkholderia multivorans CGD2] gi|221174942|gb|EEE07373.1| octopine transport system permease protein OccM [Burkholderia multivorans CGD2] gi|221181342|gb|EEE13744.1| octopine transport system permease protein OccM [Burkholderia multivorans CGD2M] Length = 257 Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 48/147 (32%), Positives = 82/147 (55%), Gaps = 4/147 (2%) Query: 251 LGQFNFIGGSTVSPEFMSLYI----ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306 LGQF I S + P Y+ +L+ TA + AEI+R GL+AVP GQ+EA ++GL+ Sbjct: 78 LGQFGVIRESFMWPLLREPYVCAVLSLALCTAGYTAEILRGGLMAVPVGQIEAGYSIGLS 137 Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 R V+ P A+R +P +++ + L+K+++LA V ++ V II QT + E+ Sbjct: 138 GFALLRRVIGPIALRQCLPAYSTEAVLLVKSTALASLVTVWEVTGVAQQIIQQTYRTTEV 197 Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIA 393 + IYL L+ ++ + L +++ Sbjct: 198 FVCAAVIYLGLNFIVVRLLGALEWRLS 224 >gi|111023725|ref|YP_706697.1| glutamate transport system permease protein GluD [Rhodococcus jostii RHA1] gi|110823255|gb|ABG98539.1| glutamate transport system permease protein GluD [Rhodococcus jostii RHA1] Length = 299 Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 45/129 (34%), Positives = 73/129 (56%), Gaps = 22/129 (17%) Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSC-------YTAAFIAEI 284 +P L+L+ YQL + V F S Y+AL+ Y + IAEI Sbjct: 116 IPVLILMIFSYQLFAEYEV---------------FKSKYLALAAVIVGLTLYNGSVIAEI 160 Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344 VR+G+ ++P+GQ EAA+ALG+ + R +LLPQA+ +++P + SQ + LK+S+L + Sbjct: 161 VRAGINSLPKGQSEAAMALGMRKGQVMRTILLPQAVTAMLPAIISQMVVALKDSALGYLI 220 Query: 345 GFADLVSVG 353 G+ ++V G Sbjct: 221 GYVEVVRSG 229 >gi|16264463|ref|NP_437255.1| putative amino acid uptake ABC transporter permease protein [Sinorhizobium meliloti 1021] gi|15140600|emb|CAC49115.1| ABC transporter, permease [Sinorhizobium meliloti 1021] Length = 228 Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 54/173 (31%), Positives = 93/173 (53%), Gaps = 13/173 (7%) Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281 LY++ +I P LVL+ Y F P LG +G + S L+ Y+ A++ Sbjct: 67 LYVT--VIRNTPILVLVLFSY---FALPELGVR--LG------KIESFVATLAIYSGAYL 113 Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341 AE+ R GLIA+P GQ EA +A+GLT + +++P +RS++P L S ++L K++SLA Sbjct: 114 AEVFRGGLIAIPPGQREAGLAIGLTEMQIRTSIIIPLMLRSVLPSLGSTMISLFKDTSLA 173 Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394 A+ +L I +T + IE ++ +Y++ ++A M ++A+ Sbjct: 174 AAIAVPELTFEARKINVETFRVIETWIVASCLYVATCSLLAALMRAAERRLAV 226 >gi|254250402|ref|ZP_04943721.1| amino acid ABC transporter permease protein [Burkholderia cenocepacia PC184] gi|124879536|gb|EAY66892.1| amino acid ABC transporter permease protein [Burkholderia cenocepacia PC184] Length = 248 Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 48/147 (32%), Positives = 82/147 (55%), Gaps = 4/147 (2%) Query: 251 LGQFNFIGGSTVSPEFMSLYI----ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306 LGQF I S + P Y+ +L+ TA + AEI+R GL+AVP GQ+EA ++GL+ Sbjct: 78 LGQFGVIRESFMWPLLREPYVCAVLSLALCTAGYTAEILRGGLMAVPVGQIEAGYSIGLS 137 Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 R V+ P A+R +P +++ + L+K+++LA V ++ V II QT + E+ Sbjct: 138 GFSLLRRVIGPIALRQCLPAYSTEAVLLVKSTALASLVTVWEVTGVAQQIIQQTYRTTEV 197 Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIA 393 + IYL L+ ++ + L +++ Sbjct: 198 FVCAAIIYLGLNFIVVRVLGALEWRLS 224 >gi|329724901|gb|EGG61404.1| ABC transporter, permease protein [Staphylococcus epidermidis VCU144] Length = 487 Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 33/80 (41%), Positives = 60/80 (75%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IAL ++A+IAEI+R+G+ AV +GQ EAA +LGL +R+ + V++PQA++ I+P L ++ Sbjct: 360 IALVINSSAYIAEIIRAGINAVDKGQTEAARSLGLNYRQTMQSVVMPQAIKKILPALGNE 419 Query: 331 YLNLLKNSSLAVAVGFADLV 350 ++ L+K SS+ +G ++++ Sbjct: 420 FVTLIKESSIVSTIGVSEIM 439 Score = 39.7 bits (91), Expect = 0.84, Method: Compositional matrix adjust. Identities = 33/145 (22%), Positives = 63/145 (43%), Gaps = 27/145 (18%) Query: 13 FSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEI 72 FS++KF + + I+V +LL + N +N+++ NL I Sbjct: 216 FSKIKFNEEKKQTCIAVPKNSPVLLDKL-----NQTIDNVKEKNL--------------I 256 Query: 73 DQGIVPYTSD--------SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKL 124 DQ + D S Y + G NT ++ G++ +I+G+ + ++S + Sbjct: 257 DQYMTKAAEDMQDDGNFISKYGNFFIKGIKNTILISLVGVVLGSILGSFIALLKISKIRP 316 Query: 125 VAWICRVYVEVFRNIPPLVVIFFLY 149 + I +Y+E R P LV +F ++ Sbjct: 317 LQLIASIYIEFLRGTPMLVQVFIVF 341 >gi|325964296|ref|YP_004242202.1| amino acid ABC transporter membrane protein, PAAT family [Arthrobacter phenanthrenivorans Sphe3] gi|323470383|gb|ADX74068.1| amino acid ABC transporter membrane protein, PAAT family [Arthrobacter phenanthrenivorans Sphe3] Length = 263 Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 42/131 (32%), Positives = 78/131 (59%), Gaps = 4/131 (3%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 ++L +A+IAE +R+GL AVP+GQ+EAA +LG+ +A +++PQA + ++PPLT++ Sbjct: 133 VSLGMVASAYIAETLRAGLQAVPKGQLEAARSLGMPQWRAMVTIVIPQAFKIVLPPLTNE 192 Query: 331 YLNLLKNSSLAVAVGFA----DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386 + L K+SSL +G +L G I+ G + +L+ YL ++I ++L Sbjct: 193 IILLTKDSSLIYVLGLTASQYELTKFGRDGISSLGAGLTPLLVAGAFYLVITIPLSLLAR 252 Query: 387 RLNAKIALKEK 397 + ++ A ++ Sbjct: 253 KFESRSARTKR 263 >gi|322411919|gb|EFY02827.1| cystine transport system permease protein [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957] Length = 216 Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 48/164 (29%), Positives = 87/164 (53%), Gaps = 11/164 (6%) Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290 G+P +V++ + L+F P G P + Y+ S +AA+I+E+ RS + Sbjct: 63 GVPMIVVL---FVLYFGLPYYG--------LELPALLCAYLGFSMVSAAYISEVFRSSIE 111 Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 A+ +GQ EAA ALGL + + ++LPQA R +PPL + ++++K+SSLA + D+ Sbjct: 112 AIDKGQWEAAKALGLPYSLMVKKIILPQAFRIAVPPLGNVIIDMVKSSSLAAMITVPDIF 171 Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394 I + + + ++ FIY ++ ++ + L K+AL Sbjct: 172 QNSKIIGGREWDYMSMYILVAFIYWLIAFLLERYQEFLENKLAL 215 >gi|293366163|ref|ZP_06612849.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Staphylococcus epidermidis M23864:W2(grey)] gi|291319685|gb|EFE60045.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Staphylococcus epidermidis M23864:W2(grey)] Length = 472 Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 33/80 (41%), Positives = 60/80 (75%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IAL ++A+IAEI+R+G+ AV +GQ EAA +LGL +R+ + V++PQA++ I+P L ++ Sbjct: 347 IALVINSSAYIAEIIRAGINAVDKGQTEAARSLGLNYRQTMQSVVMPQAIKKILPALGNE 406 Query: 331 YLNLLKNSSLAVAVGFADLV 350 ++ L+K SS+ +G ++++ Sbjct: 407 FVTLIKESSIVSTIGVSEIM 426 Score = 45.4 bits (106), Expect = 0.017, Method: Compositional matrix adjust. Identities = 34/145 (23%), Positives = 65/145 (44%), Gaps = 27/145 (18%) Query: 13 FSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEI 72 FS++KF + + I+V +LL + N +N+++ NL I Sbjct: 203 FSKIKFNEEKKQTCIAVPKNSPVLLDKL-----NQTIDNVKEKNL--------------I 243 Query: 73 DQGIVPYTSD--------SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKL 124 DQ + D S Y + + G NT ++ G++ +I+G+ + ++S + Sbjct: 244 DQYMTKAAEDMQDDGNFISKYGSFFIKGIKNTILISLVGVVLGSILGSFIALLKISKIRP 303 Query: 125 VAWICRVYVEVFRNIPPLVVIFFLY 149 + WI +Y+E R P LV +F ++ Sbjct: 304 LQWIASIYIEFLRGTPMLVQVFIVF 328 >gi|293400689|ref|ZP_06644834.1| amino acid ABC transporter, permease/substrate-binding protein [Erysipelotrichaceae bacterium 5_2_54FAA] gi|291305715|gb|EFE46959.1| amino acid ABC transporter, permease/substrate-binding protein [Erysipelotrichaceae bacterium 5_2_54FAA] Length = 510 Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 42/129 (32%), Positives = 81/129 (62%), Gaps = 4/129 (3%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P +S+ +AL ++A++AEI+R G+++V +GQ EAA +LG++++ ++ PQA++SI Sbjct: 378 PMMVSVIVALIINSSAYVAEIIRGGILSVDKGQWEAAKSLGMSNQHMMVKIIFPQAIKSI 437 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL----SLSI 379 +P L ++++ ++K +SLA + +L+SV + T ++E + I IYL SLS Sbjct: 438 LPSLGNEFIMMVKETSLASSFYIGELMSVNNIVKTATYFSLEPLTIAAIIYLIVTYSLSK 497 Query: 380 MIALFMNRL 388 ++ R+ Sbjct: 498 LVKYMERRM 506 >gi|157150410|ref|YP_001450999.1| amino acid-binding permease protein [Streptococcus gordonii str. Challis substr. CH1] gi|157075204|gb|ABV09887.1| amino acid ABC transporter, amino acid-binding/permease protein [Streptococcus gordonii str. Challis substr. CH1] Length = 521 Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 40/109 (36%), Positives = 66/109 (60%) Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 +S T A+++EIVR G+ AV +GQ EAA ALG+TH + R ++LPQ +R+I+P ++++ Sbjct: 383 VSINTGAYMSEIVRGGIFAVDKGQFEAATALGMTHGQTMRKIVLPQVIRNILPATGNEFV 442 Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 +K++S+ + +L G TI QT + + I IY L+ I Sbjct: 443 INIKDTSVLNVISVVELYFSGNTIATQTYKYFQTFTIIAVIYFVLTFTI 491 >gi|311071018|ref|YP_003975941.1| cystine ABC transporter permease [Bacillus atrophaeus 1942] gi|310871535|gb|ADP35010.1| cystine ABC transporter (permease) [Bacillus atrophaeus 1942] Length = 234 Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 69/213 (32%), Positives = 110/213 (51%), Gaps = 29/213 (13%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPL-----LYISTFLIFGLPTLVLIALKYQLH 245 + SF+ G++++L T L+R K PL +Y+S + G P LV QL Sbjct: 40 ILSFIFGMIIAL-VTALAR-----MSKITPLRWVFGVYVSA--VRGTPLLV------QLF 85 Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305 + FN T+ P F S IA S A+ +EI+R+ +++VP+GQ EA +G+ Sbjct: 86 IIFYMFPAFNI----TLDP-FPSAIIAFSLNVGAYASEIIRASILSVPKGQWEAGYTIGM 140 Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV----SVGGTIINQTG 361 TH+K V+LPQA R IPPL++ +++L+K++SLA + +L +G ++Q Sbjct: 141 THQKTLFRVILPQAFRVSIPPLSNTFISLIKDTSLASQILVVELFRKAQEIGARNLDQIL 200 Query: 362 QA-IEIILIWMFIYLSLSIMIALFMNRLNAKIA 393 IE I+ I LS+ L RL+ +A Sbjct: 201 VIYIEAAFIYWIICSLLSLAQHLIERRLDRYVA 233 >gi|199597698|ref|ZP_03211126.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Lactobacillus rhamnosus HN001] gi|258509843|ref|YP_003172594.1| ABC transporter amino acid-binding protein [Lactobacillus rhamnosus GG] gi|199591505|gb|EDY99583.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Lactobacillus rhamnosus HN001] gi|257149770|emb|CAR88743.1| ABC transporter, amino acid-binding protein [Lactobacillus rhamnosus GG] Length = 532 Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 42/110 (38%), Positives = 70/110 (63%) Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 +S T A+I+EI+R G+I+V GQ EAA ALG+TH + V+LPQA+R+ +P +T++++ Sbjct: 387 VSINTGAYISEIIRGGIISVDEGQFEAANALGMTHLQTMMKVILPQAVRNSLPAVTNEFI 446 Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382 +K++S+ + ++L G TI Q+ Q LI IYL ++ I+ Sbjct: 447 VNIKDTSVLSVISVSELFFSGETIAGQSFQFFHTYLIVSGIYLIMTFTIS 496 >gi|328477583|gb|EGF47645.1| ABC transporter glutamine-binding periplasmic protein [Lactobacillus rhamnosus MTCC 5462] Length = 486 Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 51/159 (32%), Positives = 82/159 (51%), Gaps = 23/159 (14%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 + LPLL ++ F+ G+P+L+ GS + P F++ I L+ Sbjct: 332 RGLPLLVLALFIYTGVPSLI----------------------GSKI-PAFVAGIITLTLN 368 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 A+ A V+ G+ AV GQMEAA +LGL KA R V+LPQ ++ +IP +Q++ LK Sbjct: 369 EGAYTAAFVKGGIQAVDVGQMEAARSLGLPFGKAMRKVILPQGIKIMIPSFINQFIITLK 428 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375 ++S+ +G +L G II + + +I + IYL Sbjct: 429 DTSILSIIGILELTQTGKIIIARNMEGFKIWTMVALIYL 467 >gi|307320838|ref|ZP_07600248.1| polar amino acid ABC transporter, inner membrane subunit [Sinorhizobium meliloti AK83] gi|306893548|gb|EFN24324.1| polar amino acid ABC transporter, inner membrane subunit [Sinorhizobium meliloti AK83] Length = 220 Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 40/122 (32%), Positives = 73/122 (59%) Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 L+ Y+ A++AE+ R GLIA+P GQ EA +A+GLT + +++P +RS++P L S + Sbjct: 97 LAIYSGAYLAEVFRGGLIAIPPGQREAGLAIGLTEMQIRTSIIIPLMLRSVLPSLGSTMI 156 Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 +L K++SLA A+ +L I +T + IE ++ +Y++ ++A M ++ Sbjct: 157 SLFKDTSLAAAIAVPELTFEARKINVETFRVIETWIVASCLYVATCSLLAALMRAAERRL 216 Query: 393 AL 394 A+ Sbjct: 217 AV 218 >gi|57867284|ref|YP_188964.1| amino acid ABC transporter, permease/amino acid-binding protein, putative [Staphylococcus epidermidis RP62A] gi|251811199|ref|ZP_04825672.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Staphylococcus epidermidis BCM-HMP0060] gi|282875757|ref|ZP_06284624.1| ABC transporter, permease protein [Staphylococcus epidermidis SK135] gi|57637942|gb|AAW54730.1| amino acid ABC transporter, permease/amino acid-binding protein, putative [Staphylococcus epidermidis RP62A] gi|251805280|gb|EES57937.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Staphylococcus epidermidis BCM-HMP0060] gi|281294782|gb|EFA87309.1| ABC transporter, permease protein [Staphylococcus epidermidis SK135] gi|329734283|gb|EGG70598.1| ABC transporter, permease protein [Staphylococcus epidermidis VCU045] gi|329737224|gb|EGG73478.1| ABC transporter, permease protein [Staphylococcus epidermidis VCU028] Length = 485 Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 33/80 (41%), Positives = 60/80 (75%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IAL ++A+IAEI+R+G+ AV +GQ EAA +LGL +R+ + V++PQA++ I+P L ++ Sbjct: 360 IALVINSSAYIAEIIRAGINAVDKGQTEAARSLGLNYRQTMQSVVMPQAIKKILPALGNE 419 Query: 331 YLNLLKNSSLAVAVGFADLV 350 ++ L+K SS+ +G ++++ Sbjct: 420 FVTLIKESSIVSTIGVSEIM 439 Score = 45.4 bits (106), Expect = 0.016, Method: Compositional matrix adjust. Identities = 34/145 (23%), Positives = 65/145 (44%), Gaps = 27/145 (18%) Query: 13 FSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEI 72 FS++KF + + I+V +LL + N +N+++ NL I Sbjct: 216 FSKIKFNEEKKQTCIAVPKNSPVLLDKL-----NQTIDNVKEKNL--------------I 256 Query: 73 DQGIVPYTSD--------SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKL 124 DQ + D S Y + + G NT ++ G++ +I+G+ + ++S + Sbjct: 257 DQYMTKAAEDMQDDGNFISKYGSFFIKGIKNTILISLVGVVLGSILGSFIALLKISKIRP 316 Query: 125 VAWICRVYVEVFRNIPPLVVIFFLY 149 + WI +Y+E R P LV +F ++ Sbjct: 317 LQWIASIYIEFLRGTPMLVQVFIVF 341 >gi|326693633|ref|ZP_08230638.1| glutamine ABC transporter, permease protein [Leuconostoc argentinum KCTC 3773] Length = 213 Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 41/129 (31%), Positives = 74/129 (57%), Gaps = 1/129 (0%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P F + IA AA++AEI R GL A+PRGQ +AA LG T + ++LPQ ++ I Sbjct: 82 PRFEAATIAFIVNYAAYLAEIFRGGLQAIPRGQYDAAKVLGFTRVQTFFKIILPQVIKII 141 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 +P ++ +NL+K++SL +G DL+ G ++ + +L+ + IYL ++ ++ + Sbjct: 142 VPSFGNEVINLVKDTSLVYVIGLGDLLRAGNIAASRDVTLVPYLLVGL-IYLLMTAVVTV 200 Query: 384 FMNRLNAKI 392 + R ++ Sbjct: 201 LLRRSETQL 209 >gi|303228628|ref|ZP_07315454.1| putative glutamine ABC transporter, permease protein GlnP [Veillonella atypica ACS-134-V-Col7a] gi|302516720|gb|EFL58636.1| putative glutamine ABC transporter, permease protein GlnP [Veillonella atypica ACS-134-V-Col7a] Length = 218 Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 37/120 (30%), Positives = 69/120 (57%), Gaps = 1/120 (0%) Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 AA++ EI R G+ ++PRGQ E A LG T+ + R ++LPQ + ++PPL ++ +NLLK+ Sbjct: 100 AAYLCEIFRGGIQSIPRGQYEGAKVLGFTYGQTMRTIILPQMFKRVLPPLANETINLLKD 159 Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 +SL + D++ + +I+ Q I L+ YL + ++ N L + ++ ++ Sbjct: 160 TSLVYVLAMNDILRITKSIV-QRDFDISAFLVAAIFYLIFTFILTNIFNYLEKRFSVYDE 218 >gi|229551204|ref|ZP_04439929.1| glutamate ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus rhamnosus LMS2-1] gi|229315496|gb|EEN81469.1| glutamate ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus rhamnosus LMS2-1] Length = 498 Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 51/159 (32%), Positives = 82/159 (51%), Gaps = 23/159 (14%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 + LPLL ++ F+ G+P+L+ GS + P F++ I L+ Sbjct: 344 RGLPLLVLALFIYTGVPSLI----------------------GSKI-PAFVAGIITLTLN 380 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 A+ A V+ G+ AV GQMEAA +LGL KA R V+LPQ ++ +IP +Q++ LK Sbjct: 381 EGAYTAAFVKGGIQAVDVGQMEAARSLGLPFGKAMRKVILPQGIKIMIPSFINQFIITLK 440 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375 ++S+ +G +L G II + + +I + IYL Sbjct: 441 DTSILSIIGILELTQTGKIIIARNMEGFKIWTMVALIYL 479 >gi|13476743|ref|NP_108312.1| amino acid ABC transporter, permease protein [Mesorhizobium loti MAFF303099] gi|14027504|dbj|BAB53773.1| amino acid ABC transporter, permease protein [Mesorhizobium loti MAFF303099] Length = 385 Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 34/88 (38%), Positives = 60/88 (68%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 +F+ I +S + AA++AE+VR GL A+P+GQ E A +LGL + + L++LPQA+R +I Sbjct: 247 KFLRALIGVSLFAAAYMAEVVRGGLQAIPKGQYEGADSLGLGYWQKMGLIVLPQALRLVI 306 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSV 352 P + + ++ + K++SL + + DL+ V Sbjct: 307 PGIVNTFIGMFKDTSLVLIISMFDLLGV 334 Score = 37.0 bits (84), Expect = 5.4, Method: Compositional matrix adjust. Identities = 22/72 (30%), Positives = 39/72 (54%), Gaps = 5/72 (6%) Query: 77 VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136 +P+ S + G + T L+F G+ + +GT++ GR S +V +C V++E Sbjct: 165 LPHVETSRWG-----GLLVTLSLSFVGIAVSLPLGTVLALGRRSKMPIVKTLCVVFIETV 219 Query: 137 RNIPPLVVIFFL 148 R IP + V+FF+ Sbjct: 220 RGIPLITVLFFV 231 >gi|313836987|gb|EFS74701.1| ABC transporter, permease protein [Propionibacterium acnes HL037PA2] gi|314929423|gb|EFS93254.1| ABC transporter, permease protein [Propionibacterium acnes HL044PA1] gi|314971493|gb|EFT15591.1| ABC transporter, permease protein [Propionibacterium acnes HL037PA3] gi|328906825|gb|EGG26591.1| ABC-type transport system, permease protein [Propionibacterium sp. P08] Length = 314 Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 46/109 (42%), Positives = 65/109 (59%), Gaps = 1/109 (0%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I L A++AEI RSGL +V GQ EAA ALG+ R V++PQAMR IIPPL ++ Sbjct: 157 IGLGLNEGAYLAEITRSGLESVDAGQTEAAKALGMKPSLIMRRVIIPQAMRVIIPPLGNE 216 Query: 331 YLNLLKNSSLAVAVGFA-DLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378 + +LK +SL +AV F DL I N+ I ++++ F YL ++ Sbjct: 217 TIGMLKTTSLVLAVPFTLDLQYATSAIANRIYAPIPLLIVAAFWYLVMT 265 >gi|308177957|ref|YP_003917363.1| glutamate ABC transporter inner membrane subunit GluD [Arthrobacter arilaitensis Re117] gi|307745420|emb|CBT76392.1| glutamate ABC transporter, inner membrane subunit GluD [Arthrobacter arilaitensis Re117] Length = 303 Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 45/131 (34%), Positives = 80/131 (61%), Gaps = 5/131 (3%) Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 AL Y + +AE+VRSG+ +PRGQ EA IA+GLT + R + +PQA+ +++P L Q+ Sbjct: 145 ALVFYNGSVVAELVRSGVHNLPRGQREAGIAIGLTRGMSLRHIEIPQALVAMLPALIGQF 204 Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL----IWMFIYLSLSIMIALFMNR 387 + +LK+S+L + F +L+ T + G ++ ++ I++ I +LS + L +R Sbjct: 205 VVILKDSALGYIISFNELLFFARTYSSPNGNVLQALIVAAAIFILINFTLSKIAVLVSSR 264 Query: 388 LNAKIALKEKK 398 L++++ KEK Sbjct: 265 LSSRVK-KEKN 274 Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 28/69 (40%), Positives = 39/69 (56%) Query: 79 YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138 + S++ +L G NT A G+I + I G + G GRLS NKL+ C V VE FR Sbjct: 54 FIEGSTWKNYLLPGLWNTLKAALFGIIGSVIFGLIFGVGRLSQNKLINGFCTVIVEFFRA 113 Query: 139 IPPLVVIFF 147 +P L++I F Sbjct: 114 VPVLLMIVF 122 >gi|167567070|ref|ZP_02359986.1| glutamine ABC transporter permease protein [Burkholderia oklahomensis EO147] gi|167574147|ref|ZP_02367021.1| glutamine ABC transporter permease protein [Burkholderia oklahomensis C6786] Length = 218 Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 57/186 (30%), Positives = 95/186 (51%), Gaps = 17/186 (9%) Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252 F++G+V +F R + L +YI LI G P +V + L+F P+L Sbjct: 33 GFLVGMVAGMF-----RAYGPAALNVLAQVYIE--LIRGTPIVVQVMF---LYFALPLLA 82 Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312 G + +A++ + A++AE+VR L+++P+G EA +A+GL+ + Sbjct: 83 HIRIDG-------LTAAIVAITLNSGAYLAEVVRGALLSIPKGLTEAGLAMGLSMPRVLV 135 Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372 ++ P A R +IPPL +Q + LK++SL + +G +L G II QA+EI Sbjct: 136 KIVGPLAFRRLIPPLGNQCIVSLKDTSLFIVIGVGELTRKGQEIIAGNFQAVEIWSAVAA 195 Query: 373 IYLSLS 378 IYL L+ Sbjct: 196 IYLVLT 201 >gi|114771235|ref|ZP_01448655.1| glutamate/glutamine/aspartate/asparagine ABC transporter, permease protein [alpha proteobacterium HTCC2255] gi|114548160|gb|EAU51047.1| glutamate/glutamine/aspartate/asparagine ABC transporter, permease protein [alpha proteobacterium HTCC2255] Length = 434 Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 33/78 (42%), Positives = 56/78 (71%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I ++ + +A++AE+VR GL A+P+GQ EAA +LGL + KA RL+++PQA++ IP + S Sbjct: 306 IMVTLFASAYMAEVVRGGLAALPKGQYEAADSLGLDYWKAQRLIIMPQALKISIPGIVST 365 Query: 331 YLNLLKNSSLAVAVGFAD 348 ++ L K+++L +G D Sbjct: 366 FIGLFKDTTLVSIIGLLD 383 >gi|254720342|ref|ZP_05182153.1| amino acid ABC transporter, permease protein [Brucella sp. 83/13] gi|306837436|ref|ZP_07470312.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Brucella sp. NF 2653] gi|306407479|gb|EFM63682.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Brucella sp. NF 2653] Length = 226 Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 40/126 (31%), Positives = 77/126 (61%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + I + A+ +EI+R+ + +VP+GQ EAA ++G++ R+A +LPQA R+ +P Sbjct: 89 FPAALIGFTLNIGAYSSEIIRAVISSVPKGQWEAAYSIGMSWRQALIRTILPQATRTAVP 148 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PL++ +++L+K++SLA A+ +L I+ T + + + + IYL+LS +++ Sbjct: 149 PLSNTFISLVKDTSLAAAITVPELFQSAQRIVATTYEPLILYIEAALIYLALSSILSALQ 208 Query: 386 NRLNAK 391 RL + Sbjct: 209 VRLERR 214 >gi|85717303|ref|ZP_01048257.1| amino acid ABC transporter, inner membrane component [Nitrobacter sp. Nb-311A] gi|85695892|gb|EAQ33796.1| amino acid ABC transporter, inner membrane component [Nitrobacter sp. Nb-311A] Length = 506 Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 37/97 (38%), Positives = 63/97 (64%) Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315 F+ G+ + + I ++ + A+ AE++R GL A+P GQ EAA ALGL++ K T L++ Sbjct: 359 FLPGNFTIDGLVRVLIGIALFAGAYNAEVIRGGLAAIPSGQAEAAHALGLSYWKTTGLIV 418 Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352 +PQA+R++IP L + ++ L K++SL V DL+ + Sbjct: 419 MPQAVRNVIPGLVNSFIALFKDTSLVSIVALFDLLGI 455 >gi|146294116|ref|YP_001184540.1| polar amino acid ABC transporter inner membrane subunit [Shewanella putrefaciens CN-32] gi|145565806|gb|ABP76741.1| polar amino acid ABC transporter, inner membrane subunit [Shewanella putrefaciens CN-32] Length = 226 Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 42/123 (34%), Positives = 76/123 (61%), Gaps = 4/123 (3%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IA + A+I+EI+R+G+ AV +GQ EAA +LGL+ + ++LPQA+++I+P L ++ Sbjct: 101 IAFGLNSGAYISEIIRAGIQAVDKGQTEAARSLGLSQAITMKSIILPQAIKNILPALGNE 160 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA----IEIILIWMFIYLSLSIMIALFMN 386 ++ LLK +++ +G DL+ G I ++T + LI++F+ S + M++ F Sbjct: 161 FIVLLKETAVIGFIGGVDLMRAGEIIRSRTFEDSVPLFTCALIYLFLTYSFTFMLSKFEK 220 Query: 387 RLN 389 RL Sbjct: 221 RLK 223 >gi|258541041|ref|YP_003175540.1| glutamine ABC transporter substrate-binding protein [Lactobacillus rhamnosus Lc 705] gi|257152717|emb|CAR91689.1| ABC transporter, glutamine-binding periplasmic protein [Lactobacillus rhamnosus Lc 705] Length = 486 Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 51/159 (32%), Positives = 82/159 (51%), Gaps = 23/159 (14%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 + LPLL ++ F+ G+P+L+ GS + P F++ I L+ Sbjct: 332 RGLPLLVLALFIYTGVPSLI----------------------GSKI-PAFVAGIITLTLN 368 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 A+ A V+ G+ AV GQMEAA +LGL KA R V+LPQ ++ +IP +Q++ LK Sbjct: 369 EGAYTAAFVKGGIQAVDVGQMEAARSLGLPFGKAMRKVILPQGIKIMIPSFINQFIITLK 428 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375 ++S+ +G +L G II + + +I + IYL Sbjct: 429 DTSILSIIGILELTQTGKIIIARNMEGFKIWTMVALIYL 467 >gi|229528069|ref|ZP_04417460.1| amino acid ABC transporter permease protein [Vibrio cholerae 12129(1)] gi|229334431|gb|EEN99916.1| amino acid ABC transporter permease protein [Vibrio cholerae 12129(1)] Length = 298 Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 44/134 (32%), Positives = 75/134 (55%) Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317 G + + +S + + ++A+IAEIVR+GL +P+GQ EAA +LGL R V+ P Sbjct: 158 GPARLWENLLSGVLCIGLLSSAYIAEIVRAGLANIPQGQWEAADSLGLPTWVKYRYVIAP 217 Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377 Q + +I P L Q ++L+K++S+ + +L VG I N +G EI LI YL L Sbjct: 218 QVLTAITPALAGQMISLIKDTSIISLISIQELTFVGSEIANSSGLIFEIWLIVGAAYLVL 277 Query: 378 SIMIALFMNRLNAK 391 + +++ ++ + Sbjct: 278 CLSLSMLFKQVERR 291 >gi|27468459|ref|NP_765096.1| glutamine-binding periplasmic protein [Staphylococcus epidermidis ATCC 12228] gi|27316006|gb|AAO05140.1|AE016749_86 glutamine-binding periplasmic protein [Staphylococcus epidermidis ATCC 12228] Length = 485 Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 33/80 (41%), Positives = 60/80 (75%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IAL ++A+IAEI+R+G+ AV +GQ EAA +LGL +R+ + V++PQA++ I+P L ++ Sbjct: 360 IALVINSSAYIAEIIRAGINAVDKGQTEAARSLGLNYRQTMQSVVMPQAIKKILPALGNE 419 Query: 331 YLNLLKNSSLAVAVGFADLV 350 ++ L+K SS+ +G ++++ Sbjct: 420 FVTLIKESSIVSTIGVSEIM 439 Score = 45.4 bits (106), Expect = 0.017, Method: Compositional matrix adjust. Identities = 34/145 (23%), Positives = 65/145 (44%), Gaps = 27/145 (18%) Query: 13 FSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEI 72 FS++KF + + I+V +LL + N +N+++ NL I Sbjct: 216 FSKIKFNEEKKQTCIAVPKNSPVLLDKL-----NQTIDNVKEKNL--------------I 256 Query: 73 DQGIVPYTSD--------SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKL 124 DQ + D S Y + + G NT ++ G++ +I+G+ + ++S + Sbjct: 257 DQYMTKAAEDMQDDGNFISKYGSFFIKGIKNTILISLVGVVLGSILGSFIALLKISKIRP 316 Query: 125 VAWICRVYVEVFRNIPPLVVIFFLY 149 + WI +Y+E R P LV +F ++ Sbjct: 317 LQWIASIYIEFLRGTPMLVQVFIVF 341 >gi|152994477|ref|YP_001339312.1| polar amino acid ABC transporter inner membrane subunit [Marinomonas sp. MWYL1] gi|150835401|gb|ABR69377.1| polar amino acid ABC transporter, inner membrane subunit [Marinomonas sp. MWYL1] Length = 506 Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 52/172 (30%), Positives = 93/172 (54%), Gaps = 7/172 (4%) Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286 +L LP LVL+ Y + P L F GG P F + IA+ +A++AEI R Sbjct: 62 WLFRSLPLLVLLIFVYNM----PQL--FPSTGGLLSDP-FWAGLIAMVMCESAYVAEIHR 114 Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346 GL+++P+GQ EAA ALG+ A L+++PQA+R +P LT++++ ++K SSL + Sbjct: 115 GGLLSIPKGQSEAARALGIRFAGAQWLIVIPQALRVALPSLTNEFIAIVKLSSLVSVISL 174 Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 +++ VG + Q +E + Y+ + + + +L + + + ++K Sbjct: 175 TEVLMVGQRLYTQNFLVLETMAAVAIYYVLIVTIFDFLLGQLESYLDVTKRK 226 >gi|322420357|ref|YP_004199580.1| polar amino acid ABC transporter inner membrane subunit [Geobacter sp. M18] gi|320126744|gb|ADW14304.1| polar amino acid ABC transporter, inner membrane subunit [Geobacter sp. M18] Length = 266 Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 52/176 (29%), Positives = 90/176 (51%), Gaps = 14/176 (7%) Query: 219 LPLLYISTF---LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSC 275 LPL ++ LI G P LV I + + + D +G +G + L+ Sbjct: 97 LPLRFLGKIYIELIRGTPLLVQILVFFYVVADAFGIGNRYLVG-----------ILTLAL 145 Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335 + A+I+EI+R+G+ ++ Q+E+A A+GLT R+ R V+ PQ MR I+PPL Q+ +L+ Sbjct: 146 FAGAYISEIIRAGIESIGESQLESARAIGLTRRQTYRFVVFPQVMRRILPPLAGQFASLI 205 Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 K+SSL + ++ + T +E L YL+L++ I++ L + Sbjct: 206 KDSSLLSIIAVSEFTLNAQEVNAFTYSTMESYLPLALGYLALTLPISMLSRYLEGR 261 >gi|254469435|ref|ZP_05082840.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Pseudovibrio sp. JE062] gi|211961270|gb|EEA96465.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Pseudovibrio sp. JE062] Length = 555 Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 43/111 (38%), Positives = 72/111 (64%), Gaps = 6/111 (5%) Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYI-ALSCYTAAFIAEIVRSGL 289 G+P LV+I L+ P+ G ++ M+ I A+S +A++AEI R+G+ Sbjct: 392 GIPMLVII-----LYVGLPLSGAIKSASDGAINLSNMTRGIVAISIGYSAYMAEIFRAGI 446 Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340 +AVP+GQ+EAA +LGL+ + R V+LPQA+ +IPPL ++++ +LK++SL Sbjct: 447 LAVPKGQIEAARSLGLSRWQVARFVVLPQALSIVIPPLGNEFIAMLKDTSL 497 >gi|54302944|ref|YP_132937.1| putative amino acid ABC transporter, permease protein [Photobacterium profundum SS9] gi|46916372|emb|CAG23137.1| putative amino acid ABC transporter, permease protein [Photobacterium profundum SS9] Length = 315 Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 42/117 (35%), Positives = 68/117 (58%) Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312 Q G S + S + + +AA+IAEI+RSGL A+ +GQ EAA +LGL+ + Sbjct: 170 QHFLFGSSKLWENLFSGVLCVGLISAAYIAEIIRSGLDAIAKGQWEAADSLGLSRWSRFK 229 Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369 V+ PQA ++PPL Q+++L+K+SS+ + ++ VG + N +G EI L+ Sbjct: 230 DVIFPQAFAGVVPPLAGQFISLVKDSSIISLISIQEMTFVGSEMANSSGLIFEIWLL 286 >gi|317125235|ref|YP_004099347.1| amino acid ABC transporter permease [Intrasporangium calvum DSM 43043] gi|315589323|gb|ADU48620.1| amino acid ABC transporter membrane protein 1, PAAT family [Intrasporangium calvum DSM 43043] Length = 221 Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 38/79 (48%), Positives = 54/79 (68%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IALS Y AAF+ E +RSG+ VP GQ EAA ++GLT ++ R V+LPQ R I PL + Sbjct: 95 IALSVYHAAFVCEAIRSGVNTVPVGQAEAARSIGLTFAQSLRDVVLPQGFRGAITPLGNT 154 Query: 331 YLNLLKNSSLAVAVGFADL 349 + L KN+++A A+G A++ Sbjct: 155 LIALTKNTTVATAIGVAEV 173 >gi|260465476|ref|ZP_05812666.1| polar amino acid ABC transporter, inner membrane subunit [Mesorhizobium opportunistum WSM2075] gi|259029780|gb|EEW31066.1| polar amino acid ABC transporter, inner membrane subunit [Mesorhizobium opportunistum WSM2075] Length = 513 Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 65/214 (30%), Positives = 109/214 (50%), Gaps = 24/214 (11%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 V VLG++L++ SR +P + T + GLP +V I L Sbjct: 41 VIGVVLGMILAVMGISQSRWLR------IPA-RVYTDIFRGLPAIVTILL---------- 83 Query: 251 LGQ-FNFIGGSTVSPEFMSLYI-ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308 +GQ F IG P L I ALS A+I EI RSG+ +V RGQMEA AL +++ Sbjct: 84 IGQGFARIGREIFGPSPYPLGILALSLIAGAYIGEIFRSGIQSVERGQMEACRALSMSYG 143 Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF----ADLVSVGGTIINQTGQAI 364 + RL+++PQ +R ++P L +Q++ +K+SSL +G ++ VG TG Sbjct: 144 QGMRLIVVPQGIRRVLPALVNQFIGNVKDSSLVYFLGLLASEREIFRVGQDQAVVTGNLS 203 Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 ++L +F YL +++ + +N ++ + + ++K Sbjct: 204 PLLLAGVF-YLVITVPLTHVVNYIDNSLRVGKQK 236 >gi|217977865|ref|YP_002362012.1| polar amino acid ABC transporter, inner membrane subunit [Methylocella silvestris BL2] gi|217503241|gb|ACK50650.1| polar amino acid ABC transporter, inner membrane subunit [Methylocella silvestris BL2] Length = 384 Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 40/114 (35%), Positives = 65/114 (57%), Gaps = 10/114 (8%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I ++ + +A++AE+VR GL A+P GQ E A ALGL + RLV+LPQA+R++IP + + Sbjct: 252 IGVALFASAYMAEVVRGGLQAIPSGQFEGAEALGLGRWQTQRLVILPQALRAVIPGVVNN 311 Query: 331 YLNLLKNSSLAVAVGFADLVSV----------GGTIINQTGQAIEIILIWMFIY 374 ++ L K+++L VG D + G I TG A + ++F + Sbjct: 312 FIALFKDTTLVAVVGIFDFLRTVDSARLDPVWAGPTIATTGYAFAAMFYFVFCF 365 >gi|330991448|ref|ZP_08315399.1| Inner membrane amino-acid ABC transporter permease protein yecS [Gluconacetobacter sp. SXCC-1] gi|329761467|gb|EGG77960.1| Inner membrane amino-acid ABC transporter permease protein yecS [Gluconacetobacter sp. SXCC-1] Length = 522 Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 56/176 (31%), Positives = 89/176 (50%), Gaps = 8/176 (4%) Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282 Y+S F G PTL+ QL F L QF I F++ +I+LS +A+ Sbjct: 348 YVSVFR--GAPTLL------QLLFIWNALPQFLPIFREGWFTPFLATWISLSINESAYQV 399 Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342 EI R+ L AV RGQ A ALGL+ R+ R V+ PQA+R +PP + +++LLK +SLA Sbjct: 400 EINRAALAAVDRGQELAGDALGLSRRQVYRHVIFPQALRIALPPTMNAFISLLKTTSLAS 459 Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 + +L++V + +T + E + YL + + R+ + A ++ Sbjct: 460 VISLPELLAVTQMEVARTFEFTEYYAAALVYYLGMVFFLLFVQKRIERRFAWADRH 515 >gi|301169820|emb|CBW29424.1| predicted transporter subunit: membrane component of ABC superfamily [Haemophilus influenzae 10810] Length = 225 Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 62/207 (29%), Positives = 110/207 (53%), Gaps = 19/207 (9%) Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249 F ++ +++++ T S + K +AL +YIS +I G P LV I + + + P Sbjct: 32 FFCGLLIAVIVAVIRTLPSPNLPLKLLQALCRVYIS--IIRGTPMLVQI---FIIFYGLP 86 Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309 +G T+ P F + IA S A+ AE VR+ +IA+P+GQ EA+ A+G+ +R+ Sbjct: 87 EVG-------ITLEP-FPTAIIAFSINIGAYAAETVRASIIAIPKGQWEASYAIGMNYRQ 138 Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369 A ++PQA+R +P L++ +++ +K++SLA V +L V N T E ILI Sbjct: 139 AFIRTIMPQALRISVPSLSNTFISTVKDTSLASLVLVTELFRVAQ---NITAANYEFILI 195 Query: 370 W---MFIYLSLSIMIALFMNRLNAKIA 393 + IY +++ +RL +++ Sbjct: 196 YSEAALIYWVFCFVLSFLQDRLEIRLS 222 >gi|269966666|ref|ZP_06180745.1| amino acid ABC transporter, permease protein [Vibrio alginolyticus 40B] gi|269828733|gb|EEZ82988.1| amino acid ABC transporter, permease protein [Vibrio alginolyticus 40B] Length = 306 Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 49/160 (30%), Positives = 83/160 (51%), Gaps = 1/160 (0%) Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291 +P L L L + + L F F G S + S + + ++A+IAE+VR GL + Sbjct: 142 IPLLGLEDLLRNYNGEPNTLQHFLF-GPSNLWENLASGVLCVGLLSSAYIAEVVRGGLQS 200 Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 + +GQ EA+ +LGL+ R V+ PQ ++SI P L Q ++L+K++S+ + ++ Sbjct: 201 IDQGQWEASDSLGLSRWVKYRFVIAPQVLKSITPALAGQTISLVKDTSIVSLISIQEMTF 260 Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 VG + N +G EI LI Y + ++L + AK Sbjct: 261 VGTEMANSSGYIFEIWLIVGLAYFLICFGLSLIFRHIEAK 300 >gi|253681319|ref|ZP_04862117.1| amino acid ABC transporter, permease protein [Clostridium botulinum D str. 1873] gi|253562557|gb|EES92008.1| amino acid ABC transporter, permease protein [Clostridium botulinum D str. 1873] Length = 235 Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 33/80 (41%), Positives = 58/80 (72%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I L+ + A++AEI+R G+ ++ +GQMEAA +LGLT A R V++PQA+++I+P L ++ Sbjct: 110 ITLALNSTAYVAEIIRGGIESINKGQMEAARSLGLTQSMAMRYVIIPQAIKNILPALGNE 169 Query: 331 YLNLLKNSSLAVAVGFADLV 350 ++ ++K SS+ VG +L+ Sbjct: 170 FITVIKESSIVSVVGIKELM 189 >gi|218548545|ref|YP_002382336.1| ABC transporter permease [Escherichia fergusonii ATCC 35469] gi|218356086|emb|CAQ88703.1| putative transporter subunit: permease component of ABC superfamily transporter [Escherichia fergusonii ATCC 35469] gi|324113636|gb|EGC07611.1| His/Glu/Gln/Arg/opine family protein amino ABC transporter [Escherichia fergusonii B253] gi|325496962|gb|EGC94821.1| transporter subunit: permease component of ABC superfamily transporter [Escherichia fergusonii ECD227] Length = 222 Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 60/207 (28%), Positives = 108/207 (52%), Gaps = 18/207 (8%) Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251 F +LG +L+L RLS G PL +++ F I LIA + +++ P Sbjct: 32 FGLLLGFILALM--RLS-----PVG---PLRWLARFYISIFRGTPLIAQLFMIYYGLP-- 79 Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311 QF G + P S I LS TAA+ AE +R+ + ++ +GQ EAA ++G+T + Sbjct: 80 -QF----GIELDP-VPSAMIGLSLNTAAYAAETLRAAISSIDKGQWEAAASIGMTPWQTM 133 Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371 R +LPQA R +PPL++ +++L+K++SLA + +L I ++T + + L Sbjct: 134 RRAILPQAARVALPPLSNSFISLVKDTSLAATIQVPELFRQAQLITSRTLEVFTMYLAAS 193 Query: 372 FIYLSLSIMIALFMNRLNAKIALKEKK 398 IY ++ +++ N ++ +E++ Sbjct: 194 LIYWIMATVLSTLQNYFENQLNRQERE 220 Score = 38.1 bits (87), Expect = 2.7, Method: Compositional matrix adjust. Identities = 27/97 (27%), Positives = 46/97 (47%), Gaps = 8/97 (8%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G V T L+ GM ++G ++ RLS + W+ R Y+ +FR P + +F + Sbjct: 15 LLKGAVFTLQLSIGGMFFGLLLGFILALMRLSPVGPLRWLARFYISIFRGTPLIAQLFMI 74 Query: 149 YKSV----LSVLPIPDHSIVLPFGMFLNNRGLSFPTL 181 Y + + + P+P I G+ LN + TL Sbjct: 75 YYGLPQFGIELDPVPSAMI----GLSLNTAAYAAETL 107 >gi|289168650|ref|YP_003446919.1| ABC transporter permease and substrate-binding protein, amino acid transport [Streptococcus mitis B6] gi|288908217|emb|CBJ23059.1| ABC transporter permease and substrate-binding protein, amino acid transport [Streptococcus mitis B6] Length = 521 Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 38/109 (34%), Positives = 66/109 (60%) Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 +S T A++ EIVR G++AV +GQ EAA ALG++H + R ++LPQ +R+I+P ++++ Sbjct: 384 VSINTGAYMTEIVRGGILAVDKGQFEAATALGMSHNQTMRKIVLPQVVRNILPATGNEFV 443 Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 +K++S+ + +L G T+ QT Q + I IY L+ + Sbjct: 444 INIKDTSVLNVISVVELYFSGNTVATQTYQYFQTFTIIAVIYFVLTFTV 492 >gi|259651118|dbj|BAI43280.1| amino acid ABC transporter permease component [Lactobacillus rhamnosus GG] Length = 498 Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 51/159 (32%), Positives = 82/159 (51%), Gaps = 23/159 (14%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 + LPLL ++ F+ G+P+L+ GS + P F++ I L+ Sbjct: 344 RGLPLLVLALFIYTGVPSLI----------------------GSKI-PAFVAGIITLTLN 380 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 A+ A V+ G+ AV GQMEAA +LGL KA R V+LPQ ++ +IP +Q++ LK Sbjct: 381 EGAYTAAFVKGGIQAVDVGQMEAARSLGLPFGKAMRKVILPQGIKIMIPSFINQFIITLK 440 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375 ++S+ +G +L G II + + +I + IYL Sbjct: 441 DTSILSIIGILELTQTGKIIIARNMEGFKIWTMVALIYL 479 >gi|197294964|ref|YP_002153505.1| putative binding-protein-dependent transport system protein [Burkholderia cenocepacia J2315] gi|195944443|emb|CAR57045.1| putative binding-protein-dependent transport system component [Burkholderia cenocepacia J2315] Length = 248 Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 48/147 (32%), Positives = 82/147 (55%), Gaps = 4/147 (2%) Query: 251 LGQFNFIGGSTVSPEFMSLYI----ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306 LGQF I S + P Y+ +L+ TA + AEI+R GL+AVP GQ+EA ++GL+ Sbjct: 78 LGQFGVIRESFMWPLLREPYVCAVLSLALCTAGYTAEILRGGLMAVPIGQIEAGYSIGLS 137 Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 R V+ P A+R +P +++ + L+K+++LA V ++ V II QT + E+ Sbjct: 138 GFALLRRVIGPIALRQCLPAYSTEAVLLVKSTALASLVTVWEVTGVAQQIIQQTYRTTEV 197 Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIA 393 + IYL L+ ++ + L +++ Sbjct: 198 FVCAAVIYLGLNFIVVRLLGALEWRLS 224 >gi|110633916|ref|YP_674124.1| polar amino acid ABC transporter, inner membrane subunit [Mesorhizobium sp. BNC1] gi|110284900|gb|ABG62959.1| amino acid ABC transporter membrane protein 1, PAAT family [Chelativorans sp. BNC1] Length = 237 Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 55/194 (28%), Positives = 103/194 (53%), Gaps = 7/194 (3%) Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV 262 F L++ E + + +Y + F GLP L+ + L + + + + Q + G+T Sbjct: 42 FTVALAKTSEEPSLRLAANIYTTIFR--GLPELLTLFLVF--YGAQIAVQQITRVLGATA 97 Query: 263 SPE---FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319 + E F++ +AL +A+ +E+ S A+PRGQ E A A+GL+ R+ +LV+LPQ Sbjct: 98 TIEINAFVAGIVALGAVFSAYASEVFVSAFRAIPRGQYEGAYAVGLSRRRTMQLVILPQL 157 Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379 +R +P L++ +L LLK +SL +G AD++ G + +A I +YL LS+ Sbjct: 158 IRLALPGLSNLWLILLKETSLVSVIGLADILRQTGIAARVSKEAFLFFGIACLLYLGLSV 217 Query: 380 MIALFMNRLNAKIA 393 + + + + +++ Sbjct: 218 LSSFAFSAIERRVS 231 >gi|257460053|ref|ZP_05625157.1| amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Campylobacter gracilis RM3268] gi|257442494|gb|EEV17633.1| amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Campylobacter gracilis RM3268] Length = 234 Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 49/144 (34%), Positives = 84/144 (58%), Gaps = 13/144 (9%) Query: 254 FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313 F FI +T S + AL ++A++AEIVRSG+ +V RGQMEAA A+GL + A + Sbjct: 93 FVFIIFATWSNNIAAAIFALGLNSSAYVAEIVRSGINSVDRGQMEAARAMGLGYGTAMKE 152 Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA----IEIILI 369 ++ PQA+++I+P L +++++L K +S+ V DL T +++ QA ++ IL Sbjct: 153 IIFPQAIKNILPALANEFISLFKETSVVGLVAITDL-----TFFSKSMQAALYTVQPILF 207 Query: 370 WMFIYLS----LSIMIALFMNRLN 389 +Y + S ++ + +RLN Sbjct: 208 AAVLYYASVKFFSFLVKMLESRLN 231 >gi|116627112|ref|YP_819731.1| ABC-type amino acid transport system, permease and periplasmic component [Streptococcus thermophilus LMD-9] gi|116100389|gb|ABJ65535.1| ABC-type amino acid transport system, permease and periplasmic component [Streptococcus thermophilus LMD-9] Length = 516 Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 38/109 (34%), Positives = 65/109 (59%) Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 +S T A+++EIVR G+ AV +GQ EAA ALG TH + R ++LPQ +R+I+P ++++ Sbjct: 385 VSINTGAYMSEIVRGGIFAVDKGQFEAATALGFTHGQTMRKIVLPQVIRNILPATGNEFV 444 Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 +K++S+ + +L G T+ QT Q + + IY L+ + Sbjct: 445 INIKDTSVLNVISVVELYFAGNTVATQTYQYFQTFFVIAAIYFVLTFTV 493 >gi|55820257|ref|YP_138699.1| polar amino acid ABC uptake transporter substrate binding protein/membrane-spanning protein [Streptococcus thermophilus LMG 18311] gi|55822147|ref|YP_140588.1| amino acid (glutamine) ABC transporter substrate binding protein/permease [Streptococcus thermophilus CNRZ1066] gi|55736242|gb|AAV59884.1| polar amino acid ABC uptake transporter substrate binding protein/membrane-spanning protein [Streptococcus thermophilus LMG 18311] gi|55738132|gb|AAV61773.1| amino acid (glutamine) ABC transporter substrate binding protein/permease protein [Streptococcus thermophilus CNRZ1066] Length = 516 Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 38/109 (34%), Positives = 65/109 (59%) Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 +S T A+++EIVR G+ AV +GQ EAA ALG TH + R ++LPQ +R+I+P ++++ Sbjct: 385 VSINTGAYMSEIVRGGIFAVDKGQFEAATALGFTHGQTMRKIVLPQVIRNILPATGNEFV 444 Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 +K++S+ + +L G T+ QT Q + + IY L+ + Sbjct: 445 INIKDTSVLNVISVVELYFAGNTVATQTYQYFQTFFVIAAIYFVLTFTV 493 >gi|295694800|ref|YP_003588038.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus tusciae DSM 2912] gi|295410402|gb|ADG04894.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus tusciae DSM 2912] Length = 224 Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 58/191 (30%), Positives = 100/191 (52%), Gaps = 23/191 (12%) Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233 +GL + T++ + V VLG++ +LF SR +AL +Y+ F G P Sbjct: 16 KGLGY---TLEYSLYAVVLGTVLGLIFALFRLSGSRIL-----RALGTVYVDIFR--GTP 65 Query: 234 TLVLIALKYQLHFDKP-VLGQFNFIGGSTVSPEFMSLYIALSCY---TAAFIAEIVRSGL 289 LV I + ++F P VL + G EF ++ + A+I EI+R+G+ Sbjct: 66 LLVQI---FFIYFGLPQVLPLHQWFG------EFYTVLAGAAALALNEGAYITEIIRAGI 116 Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349 ++V +GQ EAA ++G+T + R ++LPQA + +IPPL +Q++ +K++SL + +L Sbjct: 117 LSVDKGQWEAAESIGMTSYQKMRYIILPQAFKRMIPPLVNQFIQTIKDTSLLSVISITEL 176 Query: 350 VSVGGTIINQT 360 V +I T Sbjct: 177 VRAAQIVIVTT 187 Score = 40.8 bits (94), Expect = 0.40, Method: Compositional matrix adjust. Identities = 20/52 (38%), Positives = 33/52 (63%) Query: 107 ATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPI 158 T++G + RLS ++++ + VYV++FR P LV IFF+Y + VLP+ Sbjct: 32 GTVLGLIFALFRLSGSRILRALGTVYVDIFRGTPLLVQIFFIYFGLPQVLPL 83 >gi|254993940|ref|ZP_05276130.1| hypothetical protein LmonocytoFSL_13880 [Listeria monocytogenes FSL J2-064] Length = 212 Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 39/124 (31%), Positives = 76/124 (61%), Gaps = 1/124 (0%) Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327 +++IA AA+ AEI R G +++ GQ E+A LGLT+ + R ++LPQ ++ ++P + Sbjct: 85 AVFIAFILNYAAYFAEIFRGGFLSIENGQYESAKVLGLTYGQTLRKIVLPQVVKRVLPAI 144 Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387 ++ +NL+K+SSL +G DL+ G +++ I ++L+ IYL+L+ ++ + + Sbjct: 145 GNEVINLVKDSSLVYILGIGDLLRAGKIAMSRDVTLIPLVLVAA-IYLALTAILTILFKQ 203 Query: 388 LNAK 391 L + Sbjct: 204 LEKR 207 >gi|167840985|ref|ZP_02467669.1| glutamine ABC transporter permease protein [Burkholderia thailandensis MSMB43] Length = 218 Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 56/186 (30%), Positives = 95/186 (51%), Gaps = 17/186 (9%) Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252 F++G++ +F R + L +YI LI G P +V + L+F P+L Sbjct: 33 GFLVGMIAGMF-----RAYGPAVLNVLAQVYIE--LIRGTPIVVQVMF---LYFALPLLA 82 Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312 G + +A++ + A++AE+VR L+++P+G EA +A+GL+ + Sbjct: 83 HIRIDG-------LTAAIVAITLNSGAYLAEVVRGALLSIPKGLTEAGLAMGLSMPRVLV 135 Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372 ++ P A R +IPPL +Q + LK++SL + +G +L G II QA+EI Sbjct: 136 KIVGPLAFRRLIPPLGNQCIVSLKDTSLFIVIGVGELTRKGQEIIAGNFQAVEIWTAVAA 195 Query: 373 IYLSLS 378 IYL L+ Sbjct: 196 IYLVLT 201 >gi|126641537|ref|YP_001084521.1| glutamate/aspartate transport protein [Acinetobacter baumannii ATCC 17978] Length = 231 Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 43/123 (34%), Positives = 74/123 (60%) Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 AL YTAA ++E VR+G+ V RGQ AA A+G T ++ R V+LP A R++ P +TS+ Sbjct: 101 ALGLYTAARVSEHVRAGINTVSRGQKFAASAMGFTTAQSYRYVILPVAYRTVWPTITSEA 160 Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 +N+ KNS++ A+ + + T+ +T Q I I+++ +YL ++ I M + + Sbjct: 161 MNVFKNSAVLYALSVLNFFAYTKTMREETSQDIIILILSTPVYLIITYTIKFIMAWIEKR 220 Query: 392 IAL 394 +A+ Sbjct: 221 MAV 223 Score = 42.0 bits (97), Expect = 0.17, Method: Compositional matrix adjust. Identities = 23/56 (41%), Positives = 33/56 (58%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147 G W A + A ++G+L+G R NK +A+I YVE+FRNIP +V +FF Sbjct: 5 GVFTMVWTAIVAFLIAFLLGSLLGVIRTLPNKPLAFIGNCYVEIFRNIPLIVQLFF 60 >gi|294498828|ref|YP_003562528.1| sulfur-containing amino acid ABC transporter permease TcyL [Bacillus megaterium QM B1551] gi|294348765|gb|ADE69094.1| sulfur-containing amino acid ABC transporter, permease protein TcyL [Bacillus megaterium QM B1551] Length = 232 Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 61/209 (29%), Positives = 107/209 (51%), Gaps = 7/209 (3%) Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248 I + S V+G L LF L R + + +YIS + G P L+ + L + + Sbjct: 27 ILIASLVIGSTLGLFIA-LPRIYKVPVLSQIAAVYIS--FMRGTPILIQLFLVF---YGI 80 Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308 P L Q I S ++P + + I S TAA +E++R + +V +GQ EAA ++G+T + Sbjct: 81 PALLQLIHIDVSRMAP-LVFVIITYSLSTAASFSEMMRGAINSVDKGQTEAAYSIGMTGK 139 Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368 + ++LPQA+ P + + LK++SLA +G D++ G TII T A+E+ + Sbjct: 140 QTFTRIVLPQALVVAFPNFGNLVIGSLKDTSLAFTIGVMDMMGRGDTIIAATAHAVEVYI 199 Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKEK 397 IY ++I++ F + K+ ++ Sbjct: 200 ALAIIYYFVAIILEKFFVKSEQKLQKHDQ 228 >gi|199599469|ref|ZP_03212861.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Lactobacillus rhamnosus HN001] gi|199589641|gb|EDY97755.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Lactobacillus rhamnosus HN001] Length = 475 Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 51/159 (32%), Positives = 82/159 (51%), Gaps = 23/159 (14%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 + LPLL ++ F+ G+P+L+ GS + P F++ I L+ Sbjct: 321 RGLPLLVLALFIYTGVPSLI----------------------GSKI-PAFVAGIITLTLN 357 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 A+ A V+ G+ AV GQMEAA +LGL KA R V+LPQ ++ +IP +Q++ LK Sbjct: 358 EGAYTAAFVKGGIQAVDVGQMEAARSLGLPFGKAMRKVILPQGIKIMIPSFINQFIITLK 417 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375 ++S+ +G +L G II + + +I + IYL Sbjct: 418 DTSILSIIGILELTQTGKIIIARNMEGFKIWTMVALIYL 456 >gi|39935696|ref|NP_947972.1| polar amino acid ABC transport system protein AapM-2 [Rhodopseudomonas palustris CGA009] gi|39649549|emb|CAE28071.1| polar amino acid ABC transport system protein, aapM-2 [Rhodopseudomonas palustris CGA009] Length = 360 Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 35/81 (43%), Positives = 57/81 (70%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + L+ + A++AE+VR GL AVPRGQ EAA+ALGL + ++ RL++LPQA+R+++P L + Sbjct: 230 VMLALFWTAYVAEVVRGGLQAVPRGQEEAALALGLGYWRSMRLIVLPQALRAVVPGLVNL 289 Query: 331 YLNLLKNSSLAVAVGFADLVS 351 + L +SL +G D++ Sbjct: 290 GIGFLLATSLLAVIGIMDILG 310 >gi|330984830|gb|EGH82933.1| putative ABC transporter ATP-binding protein [Pseudomonas syringae pv. lachrymans str. M301315] Length = 420 Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 63/236 (26%), Positives = 111/236 (47%), Gaps = 22/236 (9%) Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226 FG+F + + + +V S VLG VL+L +LPL+ + Sbjct: 9 FGLFSDTEFWMATWTVIQLSVLTWVISIVLGFVLAL-----------AKQSSLPLINLPA 57 Query: 227 ----FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282 +L LP LVL+ Y L P + ++ F + IA+ A++A Sbjct: 58 KAYIWLFRSLPLLVLLIFVYNLPQAVPA-------TSAVLANPFWAGLIAMVMCETAYVA 110 Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342 EI R GL+++ +GQ EAA ALGL +++PQA+R +P LT++Y++++K SSL Sbjct: 111 EIHRGGLLSIAKGQTEAARALGLRFVGTQWRIVIPQALRVALPSLTNEYISIVKLSSLVS 170 Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 + +++ VG + +Q +E + F Y+ + + + RL + + + K Sbjct: 171 VISLTEILMVGQRLYSQNFLVMETMAAVAFYYVLIVTVFDFLLKRLERYLDVTQHK 226 >gi|262283287|ref|ZP_06061053.1| amino acid-binding permease [Streptococcus sp. 2_1_36FAA] gi|262260778|gb|EEY79478.1| amino acid-binding permease [Streptococcus sp. 2_1_36FAA] Length = 521 Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 40/109 (36%), Positives = 66/109 (60%) Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 +S T A+++EIVR G+ AV +GQ EAA ALG+TH + R ++LPQ +R+I+P ++++ Sbjct: 383 VSINTGAYMSEIVRGGIFAVDKGQFEAATALGMTHGQTMRKIVLPQVIRNILPATGNEFV 442 Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 +K++S+ + +L G TI QT + + I IY L+ I Sbjct: 443 INIKDTSVLNVISVVELYFSGNTIATQTYKYFQTFTIIAVIYFVLTFTI 491 >gi|258611907|ref|ZP_05711708.1| amino acid ABC transporter [Listeria monocytogenes FSL R2-503] gi|293596367|ref|ZP_05231017.2| amino acid ABC transporter [Listeria monocytogenes FSL J1-194] gi|293596977|ref|ZP_05266174.2| amino acid ABC transporter [Listeria monocytogenes HPB2262] gi|300765936|ref|ZP_07075908.1| amino acid ABC transporter, permease protein [Listeria monocytogenes FSL N1-017] gi|258607029|gb|EEW19637.1| amino acid ABC transporter [Listeria monocytogenes FSL R2-503] gi|293584368|gb|EFF96400.1| amino acid ABC transporter [Listeria monocytogenes HPB2262] gi|293595255|gb|EFG03016.1| amino acid ABC transporter [Listeria monocytogenes FSL J1-194] gi|300513322|gb|EFK40397.1| amino acid ABC transporter, permease protein [Listeria monocytogenes FSL N1-017] Length = 214 Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 39/124 (31%), Positives = 76/124 (61%), Gaps = 1/124 (0%) Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327 +++IA AA+ AEI R G +++ GQ E+A LGLT+ + R ++LPQ ++ ++P + Sbjct: 87 AVFIAFILNYAAYFAEIFRGGFLSIENGQYESAKVLGLTYGQTLRKIVLPQVVKRVLPAI 146 Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387 ++ +NL+K+SSL +G DL+ G +++ I ++L+ IYL+L+ ++ + + Sbjct: 147 GNEVINLVKDSSLVYILGIGDLLRAGKIAMSRDVTLIPLVLVAA-IYLALTAILTILFKQ 205 Query: 388 LNAK 391 L + Sbjct: 206 LEKR 209 >gi|258509858|ref|YP_003172609.1| ABC transporter glutamine-binding periplasmic protein [Lactobacillus rhamnosus GG] gi|257149785|emb|CAR88758.1| ABC transporter, glutamine-binding periplasmic protein [Lactobacillus rhamnosus GG] Length = 486 Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 51/159 (32%), Positives = 82/159 (51%), Gaps = 23/159 (14%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 + LPLL ++ F+ G+P+L+ GS + P F++ I L+ Sbjct: 332 RGLPLLVLALFIYTGVPSLI----------------------GSKI-PAFVAGIITLTLN 368 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 A+ A V+ G+ AV GQMEAA +LGL KA R V+LPQ ++ +IP +Q++ LK Sbjct: 369 EGAYTAAFVKGGIQAVDVGQMEAARSLGLPFGKAMRKVILPQGIKIMIPSFINQFIITLK 428 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375 ++S+ +G +L G II + + +I + IYL Sbjct: 429 DTSILSIIGILELTQTGKIIIARNMEGFKIWTMVALIYL 467 >gi|296127369|ref|YP_003634621.1| polar amino acid ABC transporter, inner membrane subunit [Brachyspira murdochii DSM 12563] gi|296019185|gb|ADG72422.1| polar amino acid ABC transporter, inner membrane subunit [Brachyspira murdochii DSM 12563] Length = 216 Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 39/133 (29%), Positives = 77/133 (57%), Gaps = 1/133 (0%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P F S + +A++ EI R+G+ ++ +GQ EA AL L++R+ ++LPQA+R + Sbjct: 85 PAFTSAAVTFILNYSAYLMEIFRAGIESIEKGQYEAGFALNLSYRQIMTRIILPQAVRRV 144 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 +PPL+++ +NL+K+++L + +G DL+ I+ + + + I IYL + ++ L Sbjct: 145 LPPLSNEAINLIKDTALVIVLGIGDLMLHARQILTRDYKLLP-FFIAAIIYLLFTSILVL 203 Query: 384 FMNRLNAKIALKE 396 +L K ++ Sbjct: 204 VFRQLEKKYVIRN 216 >gi|89901741|ref|YP_524212.1| amino acid ABC transporter permease [Rhodoferax ferrireducens T118] gi|89346478|gb|ABD70681.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Rhodoferax ferrireducens T118] Length = 217 Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 39/134 (29%), Positives = 77/134 (57%), Gaps = 1/134 (0%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P+F S +A +A+ AEI R+G+ ++ RGQ E A LGL++ + R ++LPQ ++ I Sbjct: 85 PDFPSAILAFVLNYSAYFAEIFRAGIQSIDRGQYEGAQVLGLSYPQTMRRIVLPQVLKRI 144 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 +PP++++ + L+K++SL + DL+ I+ + + ++ F YL +++++ Sbjct: 145 LPPMSNETITLVKDTSLIYVLAMNDLLRAARGIVQRDFTTMPFVVAAAF-YLFMTLVLTY 203 Query: 384 FMNRLNAKIALKEK 397 RL K A+ + Sbjct: 204 GFQRLEKKYAVYDD 217 >gi|300992026|ref|ZP_07179758.1| glutamine ABC transporter permease protein [Escherichia coli MS 200-1] gi|300305425|gb|EFJ59945.1| glutamine ABC transporter permease protein [Escherichia coli MS 200-1] Length = 219 Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 60/206 (29%), Positives = 109/206 (52%), Gaps = 12/206 (5%) Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248 I V G+V+ L A +R F + L++I +I G P +V + Y F Sbjct: 25 ISVLGLAGGLVIGLLAG-FARTFGGWIANHVALVFIE--VIRGTPIVVQVMFIY---FAL 78 Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308 P+ FN + + P F + + + A+IAEI R ++++ +G EA +ALGL+ Sbjct: 79 PM--AFNDL---RIDP-FTAAVGTIMINSGAYIAEITRGAVLSIHKGFREAGLALGLSRW 132 Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368 + R V+LP A+R ++PPL +Q++ +K++SL + +G A+L G II +A+EI Sbjct: 133 ETIRYVILPLALRRMLPPLGNQWIISIKDTSLFIVIGVAELTRQGQEIIAGNFRALEIWS 192 Query: 369 IWMFIYLSLSIMIALFMNRLNAKIAL 394 YL ++++++ + RL ++ + Sbjct: 193 AVAVFYLIITLVLSFILRRLERRMKI 218 >gi|312198104|ref|YP_004018165.1| polar amino acid ABC transporter inner membrane protein [Frankia sp. EuI1c] gi|311229440|gb|ADP82295.1| polar amino acid ABC transporter, inner membrane subunit [Frankia sp. EuI1c] Length = 214 Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 40/91 (43%), Positives = 59/91 (64%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+S + L YT AF+AE + SG+ +VP GQ EAA +LGLT R V+LPQA R+++P Sbjct: 84 FVSAVLVLGGYTGAFVAEALLSGIRSVPVGQAEAARSLGLTFTGTLRHVVLPQAFRAVVP 143 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356 PL + L++N+SLA +G +L + G + Sbjct: 144 PLGALLSALVRNTSLAAPIGVLELTARAGQL 174 >gi|251781764|ref|YP_002996066.1| ABC transporter amino acid-binding protein [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|242390393|dbj|BAH80852.1| ABC transporter amino acid-binding protein [Streptococcus dysgalactiae subsp. equisimilis GGS_124] Length = 528 Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 39/119 (32%), Positives = 68/119 (57%) Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 +S T A+++EIVR G+ AV +GQ EAA ALG TH + R ++LPQ +R+I+P ++++ Sbjct: 389 VSINTGAYMSEIVRGGIFAVDKGQFEAATALGFTHGQTMRKIVLPQVVRNILPATGNEFV 448 Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 +K++S+ + +L G T+ QT Q + I IY L+ + + + + Sbjct: 449 INIKDTSVLNVISVVELYFSGNTVATQTYQYFQTFTIIAIIYFVLTFTVTRILRHIERR 507 >gi|46907970|ref|YP_014359.1| amino acid ABC transporter, permease protein [Listeria monocytogenes str. 4b F2365] gi|226224343|ref|YP_002758450.1| amino acid (glutamine) ABC transporter, permease protein [Listeria monocytogenes Clip81459] gi|255520514|ref|ZP_05387751.1| hypothetical protein LmonocFSL_04656 [Listeria monocytogenes FSL J1-175] gi|46881240|gb|AAT04536.1| amino acid ABC transporter, permease protein [Listeria monocytogenes serotype 4b str. F2365] gi|225876805|emb|CAS05514.1| Putative amino acid (glutamine) ABC transporter, permease protein [Listeria monocytogenes serotype 4b str. CLIP 80459] gi|328473974|gb|EGF44790.1| hypothetical protein LM220_02221 [Listeria monocytogenes 220] Length = 213 Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 39/124 (31%), Positives = 76/124 (61%), Gaps = 1/124 (0%) Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327 +++IA AA+ AEI R G +++ GQ E+A LGLT+ + R ++LPQ ++ ++P + Sbjct: 86 AVFIAFILNYAAYFAEIFRGGFLSIENGQYESAKVLGLTYGQTLRKIVLPQVVKRVLPAI 145 Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387 ++ +NL+K+SSL +G DL+ G +++ I ++L+ IYL+L+ ++ + + Sbjct: 146 GNEVINLVKDSSLVYILGIGDLLRAGKIAMSRDVTLIPLVLVAA-IYLALTAILTILFKQ 204 Query: 388 LNAK 391 L + Sbjct: 205 LEKR 208 >gi|238794644|ref|ZP_04638250.1| Inner membrane amino-acid ABC transporter permease protein yhdY [Yersinia intermedia ATCC 29909] gi|238726033|gb|EEQ17581.1| Inner membrane amino-acid ABC transporter permease protein yhdY [Yersinia intermedia ATCC 29909] Length = 369 Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 36/76 (47%), Positives = 54/76 (71%) Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335 + +A++AE+VR GL A+PRGQ EAA +LGL + K LV+LPQA++ +IP L + + L Sbjct: 243 FQSAYVAEVVRGGLQALPRGQTEAAESLGLGYWKTQGLVILPQALKMVIPGLVNTIIALF 302 Query: 336 KNSSLAVAVGFADLVS 351 K++SL + +G DL S Sbjct: 303 KDTSLVIIIGLFDLFS 318 >gi|291279626|ref|YP_003496461.1| polar amino acid ABC transporter permease [Deferribacter desulfuricans SSM1] gi|290754328|dbj|BAI80705.1| polar amino acid ABC transporter, permease [Deferribacter desulfuricans SSM1] Length = 258 Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 41/110 (37%), Positives = 66/110 (60%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F S IA+S + A+ EI+R+G+ V GQ EA+ +LGL K ++LPQA++++I Sbjct: 128 FWSAIIAVSMFEGAYACEIIRAGIENVDTGQWEASYSLGLNTFKTFIYIILPQAIKTVIY 187 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375 PLT+ +++L+K+S+L + DL I++T EI +I F YL Sbjct: 188 PLTNIFVSLIKDSALVSVIAIYDLTMEAQKAISETFMTFEIWIIVAFTYL 237 >gi|153801948|ref|ZP_01956534.1| amino acid ABC transporter, permease protein [Vibrio cholerae MZO-3] gi|153827918|ref|ZP_01980585.1| amino acid ABC transporter, permease protein [Vibrio cholerae 623-39] gi|229522565|ref|ZP_04411981.1| amino acid ABC transporter permease protein [Vibrio cholerae TM 11079-80] gi|229526416|ref|ZP_04415820.1| amino acid ABC transporter permease protein [Vibrio cholerae bv. albensis VL426] gi|124122523|gb|EAY41266.1| amino acid ABC transporter, permease protein [Vibrio cholerae MZO-3] gi|148876763|gb|EDL74898.1| amino acid ABC transporter, permease protein [Vibrio cholerae 623-39] gi|229336574|gb|EEO01592.1| amino acid ABC transporter permease protein [Vibrio cholerae bv. albensis VL426] gi|229340550|gb|EEO05556.1| amino acid ABC transporter permease protein [Vibrio cholerae TM 11079-80] gi|327486004|gb|AEA80410.1| Amino acid ABC transporter, permease protein [Vibrio cholerae LMA3894-4] Length = 298 Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 44/134 (32%), Positives = 75/134 (55%) Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317 G + + +S + + ++A+IAEIVR+GL +P+GQ EAA +LGL R V+ P Sbjct: 158 GPARLWENLLSGVLCIGLLSSAYIAEIVRAGLANIPQGQWEAADSLGLPTWVKYRYVIAP 217 Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377 Q + +I P L Q ++L+K++S+ + +L VG I N +G EI LI YL L Sbjct: 218 QVLTAITPALAGQTISLIKDTSIISLISIQELTFVGSEIANSSGLIFEIWLIVGAAYLVL 277 Query: 378 SIMIALFMNRLNAK 391 + +++ ++ + Sbjct: 278 CLSLSMLFKQVERR 291 >gi|219854226|ref|YP_002471348.1| hypothetical protein CKR_0883 [Clostridium kluyveri NBRC 12016] gi|219567950|dbj|BAH05934.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 219 Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 59/220 (26%), Positives = 103/220 (46%), Gaps = 30/220 (13%) Query: 181 LTMDTNAKIFVFSFVLGIVLSLF------ATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234 +T++ + +LGI L+L R+ + + PLL F +GLP Sbjct: 22 MTIELTVITLILGTILGIFLALLKLSKNMVLRIISSIYTWVFRGTPLLLQLFFFYYGLP- 80 Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294 V I LK F VLG +AL+C A++AEI+R G+ ++ + Sbjct: 81 FVGIELK---PFSAAVLG------------------LALNC--GAYMAEIIRGGIQSIHK 117 Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354 GQ EAA ALG ++ + R ++LPQ + IIPP+ ++++ +LK++SL + +L+ Sbjct: 118 GQFEAAKALGFSYGETMRRIILPQTWKVIIPPVGNEFIAILKDTSLVSTIAMVELMRSAQ 177 Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394 I + I + +YL ++ M + K+A+ Sbjct: 178 QIYASSFDPISVFFTAAVLYLIMTTMFTTVFSAFEKKLAV 217 >gi|207739614|ref|YP_002258007.1| amino acid transmembrane protein [Ralstonia solanacearum IPO1609] gi|206592994|emb|CAQ59900.1| amino acid transmembrane protein [Ralstonia solanacearum IPO1609] Length = 239 Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 38/85 (44%), Positives = 56/85 (65%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 EF++ ++ Y AF +E +R+G+ AVP GQ+ AA++LG T R A ++LPQA+R Sbjct: 95 EFLATAFGIALYAGAFCSEELRAGIRAVPHGQLNAALSLGFTPRAAFVRIVLPQALRVAA 154 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADL 349 PL Q N LKN+SLA+ +G A+L Sbjct: 155 LPLLGQCANTLKNTSLAMGIGLAEL 179 >gi|220932712|ref|YP_002509620.1| polar amino acid ABC transporter, inner membrane subunit [Halothermothrix orenii H 168] gi|219994022|gb|ACL70625.1| polar amino acid ABC transporter, inner membrane subunit [Halothermothrix orenii H 168] Length = 216 Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 55/201 (27%), Positives = 108/201 (53%), Gaps = 34/201 (16%) Query: 191 VFSFVLGIVLSL----------FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240 + S +LG+++++ FA + +E+ +++PL+ I + +GLP + + Sbjct: 20 ILSLILGLIVAVPLAFGQIYGNFAIKFLVSIYERVVRSIPLIVILFLVHYGLPRVGI--- 76 Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300 +L F F++ + L +AA+ ++I R + ++ GQM+AA Sbjct: 77 --RLTF-------------------FVASVVGLGLRSAAYQSQIFRGAIQSIDNGQMKAA 115 Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 ++LG++ +A V+LPQA+R II P T+++ +LK+SSLA A+G +L+ G II+ + Sbjct: 116 LSLGMSKLQAFVTVILPQAIRLIIGPWTNEFTIVLKDSSLAYALGVVELLRQGRYIISTS 175 Query: 361 GQAIEIILIWMFIYLSLSIMI 381 + + + L IY L+I++ Sbjct: 176 NKPMPVFLTVAAIYFILTIIV 196 >gi|83746651|ref|ZP_00943700.1| Hypothetical Protein RRSL_03561 [Ralstonia solanacearum UW551] gi|83726604|gb|EAP73733.1| Hypothetical Protein RRSL_03561 [Ralstonia solanacearum UW551] Length = 258 Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 38/85 (44%), Positives = 56/85 (65%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 EF++ ++ Y AF +E +R+G+ AVP GQ+ AA++LG T R A ++LPQA+R Sbjct: 114 EFLATAFGIALYAGAFCSEELRAGIRAVPHGQLNAALSLGFTPRAAFVRIVLPQALRVAA 173 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADL 349 PL Q N LKN+SLA+ +G A+L Sbjct: 174 LPLLGQCANTLKNTSLAMGIGLAEL 198 >gi|302546543|ref|ZP_07298885.1| His/Glu/Gln/Arg/opine family amino acid ABC transporter, permease [Streptomyces hygroscopicus ATCC 53653] gi|302464161|gb|EFL27254.1| His/Glu/Gln/Arg/opine family amino acid ABC transporter, permease [Streptomyces himastatinicus ATCC 53653] Length = 305 Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 62/199 (31%), Positives = 103/199 (51%), Gaps = 16/199 (8%) Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV-------LIALKYQLH 245 F LGIVL+ RLSR K++ YI F +P +V L L +L Sbjct: 100 GFALGIVLAFM--RLSR---SPFLKSVAFTYIWAFR--SIPLIVQLLFWFNLTYLYKKLD 152 Query: 246 FDKPV-LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304 F P G F+F V + + L+ + AA+ AEIVR G++AV GQ+EAA ALG Sbjct: 153 FGIPFGPGFFSFDTAGLVG-AMSAAVLGLALHQAAYAAEIVRGGVLAVDTGQLEAAAALG 211 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364 + + R ++LPQAMRSI+P ++ ++L K +S+ + +L I + G+ + Sbjct: 212 IPRLRQLRRIVLPQAMRSILPNAANEVISLFKGTSIVSVMAIGELFYQTQVIYGRNGRVV 271 Query: 365 EIILIWMFIYLSLSIMIAL 383 ++++ Y+ L+ ++++ Sbjct: 272 PLLMVATVWYIILTTLLSI 290 >gi|298530983|ref|ZP_07018384.1| polar amino acid ABC transporter, inner membrane subunit [Desulfonatronospira thiodismutans ASO3-1] gi|298509006|gb|EFI32911.1| polar amino acid ABC transporter, inner membrane subunit [Desulfonatronospira thiodismutans ASO3-1] Length = 218 Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 41/124 (33%), Positives = 77/124 (62%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + L+ A+IAEIVR ++++ +G ++A +ALGL+ + TR ++ P A R +IPPL +Q Sbjct: 94 LVLAINAGAYIAEIVRGAVLSINKGYVDAGLALGLSRFQVTRYIVGPLAFRRMIPPLGNQ 153 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++ LK++SL + +G +L G I+ + +A+E+ IYL L+ ++AL + L Sbjct: 154 FIIGLKDTSLFIVIGVGELTRQGQEIMASSFRALEVWTAVAIIYLVLTTVLALSLRWLER 213 Query: 391 KIAL 394 ++ + Sbjct: 214 RMKI 217 >gi|323127407|gb|ADX24704.1| cystine transport system permease protein [Streptococcus dysgalactiae subsp. equisimilis ATCC 12394] Length = 216 Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 41/131 (31%), Positives = 74/131 (56%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P + Y+ S +AA+I+E+ RS + A+ +GQ EAA ALGL + + ++LPQA R Sbjct: 85 PALLCAYLGFSMVSAAYISEVFRSSIEAIDKGQWEAAKALGLPYSLMVKKIILPQAFRIA 144 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 +PPL + ++++K+SSLA + D+ I + + + ++ FIY ++ ++ Sbjct: 145 VPPLGNVIIDMVKSSSLAAMITVPDIFQNAKIIGGREWDYMSMYILVAFIYWLIAFLLER 204 Query: 384 FMNRLNAKIAL 394 + L K+AL Sbjct: 205 YQEFLENKLAL 215 >gi|312866273|ref|ZP_07726492.1| ABC transporter, permease protein [Streptococcus downei F0415] gi|311098246|gb|EFQ56471.1| ABC transporter, permease protein [Streptococcus downei F0415] Length = 263 Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 40/115 (34%), Positives = 66/115 (57%) Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328 +YIA S A+ EI+RS + VPR Q +AA ++G+ + R +LPQA++ +IP + Sbjct: 98 MYIAYSLNAGAYFGEIIRSAIANVPRHQFDAAYSIGMDKVQTYRYYILPQAVKEMIPNIE 157 Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 ++LL+NSSLA +G D++ + T IE + I++ LS++I L Sbjct: 158 LSIVSLLQNSSLATYLGIYDIMGKAQLVGTNTAHQIEAFIDASIIFIVLSVVIHL 212 >gi|254820303|ref|ZP_05225304.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family protein [Mycobacterium intracellulare ATCC 13950] Length = 605 Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 51/146 (34%), Positives = 84/146 (57%), Gaps = 5/146 (3%) Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 LG +GG T + + AL AA+I EI+RSG+ +V GQ+EA+ ALG ++ A Sbjct: 436 LGVGPIVGGLTNNNPYPIGVAALGMMAAAYIGEILRSGIQSVDPGQLEASRALGFSYPVA 495 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA----DLVSVGGTIINQTGQAIEI 366 RLV++PQ +R ++P L +Q++ LLK S+L +G +L VG + QTG + Sbjct: 496 MRLVVVPQGVRRVLPALVNQFIALLKASALVYFLGLVADQRELFQVGRDLNAQTGNLSPL 555 Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKI 392 + F YL L++ + +N ++A++ Sbjct: 556 VAAGAF-YLILTVPLTHLVNYIDARL 580 >gi|163804164|ref|ZP_02197929.1| putative amino acid ABC transporter, permease protein [Vibrio sp. AND4] gi|159172018|gb|EDP56997.1| putative amino acid ABC transporter, permease protein [Vibrio sp. AND4] Length = 181 Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 45/148 (30%), Positives = 83/148 (56%), Gaps = 29/148 (19%) Query: 191 VFSFVLGIVLSLFATRLS------RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244 +F+ +G++++L A S + + +++P+L + ++ +G+PTL+ ++L + Sbjct: 57 LFAMTIGLIIALPALSDSPALKWINRIYVEVIRSIPVLVLLLWVYYGMPTLLDVSLNH-- 114 Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304 F + IAL+ +AF+AE+ R G+ A+ RGQ EAA +LG Sbjct: 115 ---------------------FWAGVIALTIAESAFMAEVFRGGIQAISRGQHEAAESLG 153 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYL 332 L + + RLV+LPQA+R I+PPL +Q++ Sbjct: 154 LNYWQKMRLVILPQALRQILPPLGNQFV 181 Score = 45.1 bits (105), Expect = 0.022, Method: Compositional matrix adjust. Identities = 24/70 (34%), Positives = 43/70 (61%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L GF +T ++ M+ A IG ++ LS + + WI R+YVEV R+IP LV++ ++ Sbjct: 41 LLAGFNDTIQVSLLSMLFAMTIGLIIALPALSDSPALKWINRIYVEVIRSIPVLVLLLWV 100 Query: 149 YKSVLSVLPI 158 Y + ++L + Sbjct: 101 YYGMPTLLDV 110 >gi|24379378|ref|NP_721333.1| putative amino acid ABC transporter, permease protein [Streptococcus mutans UA159] gi|24377307|gb|AAN58639.1|AE014934_3 putative amino acid ABC transporter, permease protein [Streptococcus mutans UA159] Length = 230 Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 39/108 (36%), Positives = 69/108 (63%), Gaps = 2/108 (1%) Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 AA I+E+ +S +AVP+GQ+EA +++GLT + R +LLPQ + +P +T+ LNL+K+ Sbjct: 109 AASISEVFKSAYLAVPKGQLEAGLSIGLTGFQTFRRILLPQTFQIALPNITTAILNLMKD 168 Query: 338 SSLAVAVGFADLVSVGGTII--NQTGQAIEIILIWMFIYLSLSIMIAL 383 ++LA +G D++ G II N ++E FIY ++++++L Sbjct: 169 AALAYTIGLVDVMGAGNLIISRNLGNYSLETYTAVAFIYWGIALVLSL 216 >gi|296269106|ref|YP_003651738.1| polar amino acid ABC transporter inner membrane subunit [Thermobispora bispora DSM 43833] gi|296091893|gb|ADG87845.1| polar amino acid ABC transporter, inner membrane subunit [Thermobispora bispora DSM 43833] Length = 223 Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 36/70 (51%), Positives = 52/70 (74%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + LS YTAAF+ E++RSG+ VP GQ EAA +LGLT + RLV+LPQAMR+++ PL + Sbjct: 97 LGLSAYTAAFVCEVIRSGINTVPLGQAEAARSLGLTFPQTLRLVILPQAMRAVVAPLGTL 156 Query: 331 YLNLLKNSSL 340 L+KN+++ Sbjct: 157 LNALIKNTTV 166 >gi|262164526|ref|ZP_06032264.1| amino acid ABC transporter permease protein [Vibrio mimicus VM223] gi|262026906|gb|EEY45573.1| amino acid ABC transporter permease protein [Vibrio mimicus VM223] Length = 298 Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 43/134 (32%), Positives = 75/134 (55%) Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317 G + + +S + + ++A+IAEIVR+GL +P+GQ EAA +LGL R V+ P Sbjct: 158 GPARLWENLLSGVLCIGLLSSAYIAEIVRAGLANIPQGQWEAADSLGLPTWVKYRYVIAP 217 Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377 Q + +I P L Q ++L+K++S+ + +L VG I N +G EI +I YL L Sbjct: 218 QVLTAITPALAGQTISLIKDTSIISLISIQELTFVGSEIANSSGLIFEIWIIVGAAYLVL 277 Query: 378 SIMIALFMNRLNAK 391 + +++ ++ + Sbjct: 278 CLTLSMLFKQVEKR 291 >gi|116873173|ref|YP_849954.1| amino acid ABC transporter, permease protein [Listeria welshimeri serovar 6b str. SLCC5334] gi|116742051|emb|CAK21175.1| amino acid ABC transporter, permease protein [Listeria welshimeri serovar 6b str. SLCC5334] Length = 213 Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 39/124 (31%), Positives = 76/124 (61%), Gaps = 1/124 (0%) Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327 +++IA AA+ AEI R G +++ GQ E+A LGLT+ + R ++LPQ ++ ++P + Sbjct: 86 AVFIAFILNYAAYFAEIFRGGFLSIENGQYESAKVLGLTYGQTLRKIVLPQVVKRVLPAI 145 Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387 ++ +NL+K+SSL +G DL+ G +++ I ++L+ IYL+L+ ++ + + Sbjct: 146 GNEVINLVKDSSLVYILGIGDLLRAGKIAMSRDVTLIPLVLVAA-IYLALTAILTILFKQ 204 Query: 388 LNAK 391 L + Sbjct: 205 LEKR 208 >gi|59800817|ref|YP_207529.1| putative ABC transporter, permease protein, amino acid [Neisseria gonorrhoeae FA 1090] gi|194098108|ref|YP_002001156.1| Amino acid permease integral membrane protein [Neisseria gonorrhoeae NCCP11945] gi|239998564|ref|ZP_04718488.1| Amino acid permease integral membrane protein [Neisseria gonorrhoeae 35/02] gi|240013689|ref|ZP_04720602.1| Amino acid permease integral membrane protein [Neisseria gonorrhoeae DGI18] gi|240016129|ref|ZP_04722669.1| Amino acid permease integral membrane protein [Neisseria gonorrhoeae FA6140] gi|240080271|ref|ZP_04724814.1| Amino acid permease integral membrane protein [Neisseria gonorrhoeae FA19] gi|240112483|ref|ZP_04726973.1| Amino acid permease integral membrane protein [Neisseria gonorrhoeae MS11] gi|240115223|ref|ZP_04729285.1| Amino acid permease integral membrane protein [Neisseria gonorrhoeae PID18] gi|240120758|ref|ZP_04733720.1| Amino acid permease integral membrane protein [Neisseria gonorrhoeae PID24-1] gi|240123064|ref|ZP_04736020.1| Amino acid permease integral membrane protein [Neisseria gonorrhoeae PID332] gi|240125316|ref|ZP_04738202.1| Amino acid permease integral membrane protein [Neisseria gonorrhoeae SK-92-679] gi|240127768|ref|ZP_04740429.1| Amino acid permease integral membrane protein [Neisseria gonorrhoeae SK-93-1035] gi|254493285|ref|ZP_05106456.1| amino acid permease integral membrane protein [Neisseria gonorrhoeae 1291] gi|260440959|ref|ZP_05794775.1| Amino acid permease integral membrane protein [Neisseria gonorrhoeae DGI2] gi|268594423|ref|ZP_06128590.1| amino acid permease integral membrane protein [Neisseria gonorrhoeae 35/02] gi|268596420|ref|ZP_06130587.1| amino acid permease integral membrane protein [Neisseria gonorrhoeae FA19] gi|268598550|ref|ZP_06132717.1| amino acid permease integral membrane protein [Neisseria gonorrhoeae MS11] gi|268600903|ref|ZP_06135070.1| amino acid permease integral membrane protein [Neisseria gonorrhoeae PID18] gi|268681690|ref|ZP_06148552.1| amino acid permease integral membrane protein [Neisseria gonorrhoeae PID332] gi|268683917|ref|ZP_06150779.1| amino acid permease integral membrane protein [Neisseria gonorrhoeae SK-92-679] gi|268686160|ref|ZP_06153022.1| amino acid permease integral membrane protein [Neisseria gonorrhoeae SK-93-1035] gi|291044287|ref|ZP_06569996.1| amino acid permease integral membrane protein [Neisseria gonorrhoeae DGI2] gi|293399479|ref|ZP_06643632.1| polar amino acid transport system permease [Neisseria gonorrhoeae F62] gi|59717712|gb|AAW89117.1| putative ABC transporter, permease protein, amino acid [Neisseria gonorrhoeae FA 1090] gi|193933398|gb|ACF29222.1| Amino acid permease integral membrane protein [Neisseria gonorrhoeae NCCP11945] gi|226512325|gb|EEH61670.1| amino acid permease integral membrane protein [Neisseria gonorrhoeae 1291] gi|268547812|gb|EEZ43230.1| amino acid permease integral membrane protein [Neisseria gonorrhoeae 35/02] gi|268550208|gb|EEZ45227.1| amino acid permease integral membrane protein [Neisseria gonorrhoeae FA19] gi|268582681|gb|EEZ47357.1| amino acid permease integral membrane protein [Neisseria gonorrhoeae MS11] gi|268585034|gb|EEZ49710.1| amino acid permease integral membrane protein [Neisseria gonorrhoeae PID18] gi|268621974|gb|EEZ54374.1| amino acid permease integral membrane protein [Neisseria gonorrhoeae PID332] gi|268624201|gb|EEZ56601.1| amino acid permease integral membrane protein [Neisseria gonorrhoeae SK-92-679] gi|268626444|gb|EEZ58844.1| amino acid permease integral membrane protein [Neisseria gonorrhoeae SK-93-1035] gi|291011181|gb|EFE03177.1| amino acid permease integral membrane protein [Neisseria gonorrhoeae DGI2] gi|291610048|gb|EFF39170.1| polar amino acid transport system permease [Neisseria gonorrhoeae F62] gi|317163839|gb|ADV07380.1| putative ABC transporter, permease protein, amino acid [Neisseria gonorrhoeae TCDC-NG08107] Length = 238 Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 36/121 (29%), Positives = 67/121 (55%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I S A+ +E +R+ +++VP+GQ EA ++G+T+ + R ++ PQA R +PPL+++ Sbjct: 111 IGFSLNVGAYASETIRAAILSVPKGQWEAGFSIGMTYMQTFRRIVAPQAFRVAVPPLSNE 170 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++ L KN+SLA V +L V N+T + + + +Y ++ L RL Sbjct: 171 FIGLFKNTSLAAVVTVTELFRVAQETANRTYDFLPVYIEAALVYWCFCKVLFLIQARLEK 230 Query: 391 K 391 + Sbjct: 231 R 231 >gi|299066291|emb|CBJ37475.1| putative amino-acid transmembrane abc transporter protein [Ralstonia solanacearum CMR15] Length = 217 Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 50/155 (32%), Positives = 84/155 (54%), Gaps = 5/155 (3%) Query: 243 QLHFDKPVLGQ--FNFIGGSTVSPE---FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQM 297 Q+ + P+L Q F G S E + + I L+ YT+A++AE+ R + A+PRGQ Sbjct: 59 QIFQNTPLLMQMFLVFFGASMAGLEMSPWTAAAIGLTLYTSAYLAEVWRGCVEAIPRGQW 118 Query: 298 EAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII 357 EA+ +L + + + R V+LPQA+R I P + ++K +++A +GF DL +G + Sbjct: 119 EASASLAMGYFQQMRHVVLPQAVRMSIAPTVGFSVQIVKGTAVASIIGFEDLTKLGSVLA 178 Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 N T Q I + YL+L ++L + L K+ Sbjct: 179 NATFQPFLIYGLVGMAYLALCWPLSLCASHLEKKL 213 >gi|227325924|ref|ZP_03829948.1| glutamine ABC transporter permease protein [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 219 Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 40/129 (31%), Positives = 76/129 (58%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + + + + A+IAEI R ++++ G EA +ALGL+ R V+ P A+R ++P Sbjct: 90 FAAAVVTIMINSGAYIAEITRGSVLSIHNGFREAGLALGLSRSATLRHVIAPLALRRMLP 149 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PL +Q++ +K++SL + +G A+L G II +A+EI IYL ++++++ + Sbjct: 150 PLGNQWIISIKDTSLFIVIGVAELTRSGQEIIAGNFRALEIWTAVAIIYLCITLILSFIL 209 Query: 386 NRLNAKIAL 394 RL ++ + Sbjct: 210 RRLERRLKI 218 >gi|220903865|ref|YP_002479177.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219868164|gb|ACL48499.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 266 Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 63/207 (30%), Positives = 107/207 (51%), Gaps = 21/207 (10%) Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247 KI V S + L L T L R + + + Y+ +I G+P LV Q+ + Sbjct: 71 KITVLSICCAVPLGLL-TGLGRISNNRLINLIASTYVE--VIRGIPLLV------QIFYI 121 Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALS-CYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306 L +F + G T S +A+S CY A++ E+ R+G+ A+ +GQ EAA +LG Sbjct: 122 YYALSRFVQVSGVT------SAVVAISFCY-GAYMGEVFRAGITAINKGQSEAARSLGFN 174 Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE- 365 + R V+LPQAMR+I+PP+ ++ + +LK++SL + D++ + + T E Sbjct: 175 GFQTMRYVVLPQAMRTILPPVGNECIAMLKDTSLVSIMAVPDIMQRARSFVGTTYLYFET 234 Query: 366 ---IILIWMFIYLSLSIMIALFMNRLN 389 + L+++ I L LS +++ RLN Sbjct: 235 YTVVALLYLVITLILSKTVSIMEARLN 261 Score = 45.4 bits (106), Expect = 0.014, Method: Compositional matrix adjust. Identities = 25/58 (43%), Positives = 34/58 (58%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 G + TF + + A +G L G GR+S N+L+ I YVEV R IP LV IF++Y Sbjct: 65 GVLITFKITVLSICCAVPLGLLTGLGRISNNRLINLIASTYVEVIRGIPLLVQIFYIY 122 >gi|50914070|ref|YP_060042.1| cystine transport system permease protein [Streptococcus pyogenes MGAS10394] gi|50903144|gb|AAT86859.1| Cystine transport system permease protein [Streptococcus pyogenes MGAS10394] Length = 216 Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 41/131 (31%), Positives = 74/131 (56%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P + Y+ S +AA+I+E+ RS + A+ +GQ EAA ALGL + + ++LPQA R Sbjct: 85 PALLCAYLGFSMVSAAYISEVFRSSIEAIDKGQWEAAKALGLPYSLMVKKIILPQAFRIA 144 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 +PPL + ++++K+SSLA + D+ I + + + ++ FIY ++ ++ Sbjct: 145 VPPLGNVIIDMVKSSSLAAMITVPDIFQNAKIIGGREWDYMSMYILVAFIYWLIAFLLER 204 Query: 384 FMNRLNAKIAL 394 + L K+AL Sbjct: 205 YQEFLENKLAL 215 >gi|28900674|ref|NP_800329.1| amino acid ABC transporter permease [Vibrio parahaemolyticus RIMD 2210633] gi|260365548|ref|ZP_05778085.1| amino acid ABC transporter, permease protein [Vibrio parahaemolyticus K5030] gi|260877612|ref|ZP_05889967.1| amino acid ABC transporter, permease protein [Vibrio parahaemolyticus AN-5034] gi|260895967|ref|ZP_05904463.1| amino acid ABC transporter, permease protein [Vibrio parahaemolyticus Peru-466] gi|260901648|ref|ZP_05910043.1| amino acid ABC transporter, permease protein [Vibrio parahaemolyticus AQ4037] gi|28809054|dbj|BAC62162.1| amino acid ABC transporter, permease protein [Vibrio parahaemolyticus RIMD 2210633] gi|308085232|gb|EFO34927.1| amino acid ABC transporter, permease protein [Vibrio parahaemolyticus Peru-466] gi|308090515|gb|EFO40210.1| amino acid ABC transporter, permease protein [Vibrio parahaemolyticus AN-5034] gi|308108923|gb|EFO46463.1| amino acid ABC transporter, permease protein [Vibrio parahaemolyticus AQ4037] gi|308114385|gb|EFO51925.1| amino acid ABC transporter, permease protein [Vibrio parahaemolyticus K5030] Length = 306 Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 49/160 (30%), Positives = 84/160 (52%), Gaps = 1/160 (0%) Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291 +P L L L + + L F F G S + S + + ++A+IAE+VR+GL + Sbjct: 142 IPLLGLEDLLRNYNGEPNALQSFLF-GPSNLWENLASGVLCVGLLSSAYIAEVVRAGLQS 200 Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 + +GQ EAA +LGL+ R V+ PQ +++I P L Q ++L+K++S+ + ++ Sbjct: 201 IDQGQWEAADSLGLSRWVKYRFVIAPQVLKAITPALAGQTISLVKDTSIVSLISIQEMTF 260 Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 VG + N +G EI LI F Y + ++L + K Sbjct: 261 VGTEMANSSGYIFEIWLIVGFSYFLICFGLSLIFRYIEKK 300 >gi|296119654|ref|ZP_06838212.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Corynebacterium ammoniagenes DSM 20306] gi|295967537|gb|EFG80804.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Corynebacterium ammoniagenes DSM 20306] Length = 305 Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 39/81 (48%), Positives = 57/81 (70%), Gaps = 1/81 (1%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+S+ + L AA++AEIVRSG+ +VP GQ EA+ ALG+ R ++PQAMR IIP Sbjct: 142 FLSV-VGLGLNEAAYMAEIVRSGISSVPEGQKEASKALGMGWWMTMRRTVMPQAMRIIIP 200 Query: 326 PLTSQYLNLLKNSSLAVAVGF 346 P +++++LLK SSL VA+ + Sbjct: 201 PTGNEFISLLKTSSLVVAIPY 221 >gi|153953604|ref|YP_001394369.1| amino acid ABC transporter permease [Clostridium kluyveri DSM 555] gi|146346485|gb|EDK33021.1| Amino acid ABC transporter, permease protein [Clostridium kluyveri DSM 555] Length = 216 Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 59/220 (26%), Positives = 103/220 (46%), Gaps = 30/220 (13%) Query: 181 LTMDTNAKIFVFSFVLGIVLSLF------ATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234 +T++ + +LGI L+L R+ + + PLL F +GLP Sbjct: 19 MTIELTVITLILGTILGIFLALLKLSKNMVLRIISSIYTWVFRGTPLLLQLFFFYYGLP- 77 Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294 V I LK F VLG +AL+C A++AEI+R G+ ++ + Sbjct: 78 FVGIELK---PFSAAVLG------------------LALNC--GAYMAEIIRGGIQSIHK 114 Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354 GQ EAA ALG ++ + R ++LPQ + IIPP+ ++++ +LK++SL + +L+ Sbjct: 115 GQFEAAKALGFSYGETMRRIILPQTWKVIIPPVGNEFIAILKDTSLVSTIAMVELMRSAQ 174 Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394 I + I + +YL ++ M + K+A+ Sbjct: 175 QIYASSFDPISVFFTAAVLYLIMTTMFTTVFSAFEKKLAV 214 >gi|150377913|ref|YP_001314508.1| polar amino acid ABC transporter, inner membrane subunit [Sinorhizobium medicae WSM419] gi|150032460|gb|ABR64575.1| polar amino acid ABC transporter, inner membrane subunit [Sinorhizobium medicae WSM419] Length = 502 Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 58/181 (32%), Positives = 98/181 (54%), Gaps = 17/181 (9%) Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQ-FNFIGGSTVSPEFMSLYI-ALSCYTAAFI 281 I T + GLP +V I L +GQ F IG P L I ALS A+I Sbjct: 67 IYTDIFRGLPAIVTILL----------IGQGFARIGRELFGPSPYPLGILALSLIAGAYI 116 Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341 EI RSG+ +V RGQMEA AL +++ + RL+++PQ +R ++P L +Q++ +K+SSL Sbjct: 117 GEIFRSGIQSVDRGQMEACRALSMSYGQGMRLIVVPQGVRRVLPALVNQFIGNVKDSSLV 176 Query: 342 VAVGF----ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 +G ++ VG TG ++L +F YL +++ + +N +++++ L ++ Sbjct: 177 YFLGLLASEREIFRVGQDQAVVTGNLSPLLLAGVF-YLVVTVPLTHVVNAIDSRLRLGKQ 235 Query: 398 K 398 + Sbjct: 236 R 236 >gi|87124566|ref|ZP_01080415.1| Amino acid ABC transporter, permease protein, 3-TM region,His/Glu/Gln/Arg/opine [Synechococcus sp. RS9917] gi|86168138|gb|EAQ69396.1| Amino acid ABC transporter, permease protein, 3-TM region,His/Glu/Gln/Arg/opine [Synechococcus sp. RS9917] Length = 345 Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 43/125 (34%), Positives = 76/125 (60%), Gaps = 3/125 (2%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +A + + +A++AE VR GL ++P Q EAA ALGL+ ++ +LV+LPQA++ IP LT+Q Sbjct: 212 LAFALFASAYVAEDVRGGLQSIPSTQKEAAAALGLSAWQSLQLVVLPQALQIAIPALTNQ 271 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQT---GQAIEIILIWMFIYLSLSIMIALFMNR 387 + LL+N+SL +G +L+ + +++ G+ +E+ + +Y L +AL R Sbjct: 272 AIGLLQNTSLMALLGLVELLGISRSLLANPAFIGRHLEVYVWLASLYWLLCTAMALLARR 331 Query: 388 LNAKI 392 L + Sbjct: 332 LERSV 336 >gi|116513461|ref|YP_812367.1| ABC-type amino acid transport system, permease [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|116092776|gb|ABJ57929.1| amino acid ABC transporter membrane protein, PAAT family [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] Length = 247 Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 56/199 (28%), Positives = 105/199 (52%), Gaps = 9/199 (4%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 + SF+LG+V++L T L R +K G L + I F ++ + L+ + ++F P Sbjct: 37 IISFILGLVIAL-VTALVR-ISDKGGGFLIIKAIFRFYVWLFRSTPLLVQLFIVYFGLPY 94 Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 L + F + I S T A+ +E +R+ + +VPR Q EAA ++G+ K Sbjct: 95 LKIPGLLPNGIKLAPFTAGIITFSLNTGAYASETIRAAIQSVPREQWEAAASIGMNRGKT 154 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370 R ++LPQA++ IPPL++ ++ L+K++SLA ++ ++ V I + Q Sbjct: 155 LRRIILPQALKVSIPPLSNSFIGLVKDTSLAASITIVEMFEVSQQIAAENYQP------- 207 Query: 371 MFIYLSLSIMIALFMNRLN 389 + +Y ++++ ALF + L+ Sbjct: 208 LIMYSLVALVYALFCSVLS 226 >gi|296101734|ref|YP_003611880.1| cystine transport system permease protein [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295056193|gb|ADF60931.1| cystine transport system permease protein [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 222 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 61/207 (29%), Positives = 108/207 (52%), Gaps = 18/207 (8%) Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251 F VLG VL+L R+S + + L YIS F G P LIA + +++ P Sbjct: 32 FGLVLGFVLALM--RMSPVWPVRW---LARFYISVFR--GTP---LIAQLFMIYYGLP-- 79 Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311 QF G + P + I LS TAA+ +E +R+ + ++ +GQ EAA ++G+T + Sbjct: 80 -QF----GIELDP-IPAAMIGLSLNTAAYTSETLRAAISSIDKGQWEAAASIGMTPWQTL 133 Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371 R +LPQA R +PPL++ +++L+K++SLA + +L I ++T + + L Sbjct: 134 RRAILPQAARVALPPLSNSFISLVKDTSLAATIQVPELFRQAQLITSRTLEVFTMYLAAS 193 Query: 372 FIYLSLSIMIALFMNRLNAKIALKEKK 398 IY ++ +++ N ++ +E+ Sbjct: 194 LIYWVMATVLSALQNYFENQLNRQERD 220 Score = 38.5 bits (88), Expect = 2.0, Method: Compositional matrix adjust. Identities = 29/97 (29%), Positives = 46/97 (47%), Gaps = 8/97 (8%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G V T L+ GM ++G ++ R+S V W+ R Y+ VFR P + +F + Sbjct: 15 LLKGAVFTLQLSIGGMFFGLVLGFVLALMRMSPVWPVRWLARFYISVFRGTPLIAQLFMI 74 Query: 149 YKSV----LSVLPIPDHSIVLPFGMFLNNRGLSFPTL 181 Y + + + PIP I G+ LN + TL Sbjct: 75 YYGLPQFGIELDPIPAAMI----GLSLNTAAYTSETL 107 >gi|169796220|ref|YP_001714013.1| glutamate/aspartate ABC transporter membrane protein [Acinetobacter baumannii AYE] gi|184157851|ref|YP_001846190.1| amino acid ABC transporter permease [Acinetobacter baumannii ACICU] gi|213157046|ref|YP_002319091.1| glutamate/aspartate transport system permease protein GltJ [Acinetobacter baumannii AB0057] gi|215483675|ref|YP_002325896.1| Binding-protein-dependent transport system inner membrane component family protein [Acinetobacter baumannii AB307-0294] gi|239502272|ref|ZP_04661582.1| Binding-protein-dependent transport system inner membrane component family protein [Acinetobacter baumannii AB900] gi|294838745|ref|ZP_06783428.1| Binding-protein-dependent transport system inner membrane component family protein [Acinetobacter sp. 6013113] gi|294841310|ref|ZP_06785993.1| Binding-protein-dependent transport system inner membrane component family protein [Acinetobacter sp. 6014059] gi|294859045|ref|ZP_06796814.1| Binding-protein-dependent transport system inner membrane component family protein [Acinetobacter sp. 6013150] gi|301347721|ref|ZP_07228462.1| Binding-protein-dependent transport system inner membrane component family protein [Acinetobacter baumannii AB056] gi|301596774|ref|ZP_07241782.1| Binding-protein-dependent transport system inner membrane component family protein [Acinetobacter baumannii AB059] gi|169149147|emb|CAM87026.1| glutamate/aspartate transport protein (ABC superfamily, membrane) [Acinetobacter baumannii AYE] gi|183209445|gb|ACC56843.1| ABC-type amino acid transport system, permease component [Acinetobacter baumannii ACICU] gi|193077141|gb|ABO11919.2| glutamate/aspartate transport protein [Acinetobacter baumannii ATCC 17978] gi|213056206|gb|ACJ41108.1| glutamate/aspartate transport system permease protein GltJ [Acinetobacter baumannii AB0057] gi|213989092|gb|ACJ59391.1| Binding-protein-dependent transport system inner membrane component family protein [Acinetobacter baumannii AB307-0294] gi|322508166|gb|ADX03620.1| ABC-type amino acid transport system, permease component [Acinetobacter baumannii 1656-2] gi|323517740|gb|ADX92121.1| ABC-type amino acid transport system, permease component [Acinetobacter baumannii TCDC-AB0715] Length = 280 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 43/123 (34%), Positives = 74/123 (60%) Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 AL YTAA ++E VR+G+ V RGQ AA A+G T ++ R V+LP A R++ P +TS+ Sbjct: 150 ALGLYTAARVSEHVRAGINTVSRGQKFAASAMGFTTAQSYRYVILPVAYRTVWPTITSEA 209 Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 +N+ KNS++ A+ + + T+ +T Q I I+++ +YL ++ I M + + Sbjct: 210 MNVFKNSAVLYALSVLNFFAYTKTMREETSQDIIILILSTPVYLIITYTIKFIMAWIEKR 269 Query: 392 IAL 394 +A+ Sbjct: 270 MAV 272 Score = 42.0 bits (97), Expect = 0.18, Method: Compositional matrix adjust. Identities = 30/99 (30%), Positives = 50/99 (50%), Gaps = 14/99 (14%) Query: 63 FLSERAGFEIDQG--------IVPYTSDSSYATA------ILVGFVNTFWLAFSGMIPAT 108 F +E + +D+ ++ +S ++YA A + G W A + A Sbjct: 11 FCAESNEYGVDKAAWAESVCKVIGSSSYNAYAEAPTWLQMLGSGVFTMVWTAIVAFLIAF 70 Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147 ++G+L+G R NK +A+I YVE+FRNIP +V +FF Sbjct: 71 LLGSLLGVIRTLPNKPLAFIGNCYVEIFRNIPLIVQLFF 109 >gi|134098325|ref|YP_001103986.1| glutamate permease [Saccharopolyspora erythraea NRRL 2338] gi|291004255|ref|ZP_06562228.1| glutamate permease [Saccharopolyspora erythraea NRRL 2338] gi|133910948|emb|CAM01061.1| glutamate permease [Saccharopolyspora erythraea NRRL 2338] Length = 291 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 62/210 (29%), Positives = 112/210 (53%), Gaps = 25/210 (11%) Query: 191 VFSFVLGIVLSL-----FA-TRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244 V +F G VL+L FA RLS H + +P I F +P ++LI + L Sbjct: 70 VGAFATGAVLALAFGAVFALGRLSDHAWLR----VPCAGIVEFF-RAIPLVILI---FFL 121 Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304 ++ P LG NF ++ S+ + L+ Y + +AE+ R+G+ A+PRGQ EAA ++G Sbjct: 122 YYAAPGLG-VNF-------GQYWSVVLGLTLYNGSVLAEVFRAGVNALPRGQTEAAYSIG 173 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG---GTIINQTG 361 + + R V+LPQ++R ++P + SQ + LLK+S+L + + +L+ G + Sbjct: 174 MRKNQVMRFVVLPQSVRMMLPAIISQLVVLLKDSALGFLITYQELLYYARYLGGVPTLDR 233 Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 I + ++ +Y+S+ +++ F N L+ + Sbjct: 234 PIIPVSMVVAALYISMCLLLTWFANFLDRR 263 >gi|146311432|ref|YP_001176506.1| binding-protein-dependent transport systems inner membrane component [Enterobacter sp. 638] gi|145318308|gb|ABP60455.1| amino acid ABC transporter membrane protein 2, PAAT family [Enterobacter sp. 638] Length = 228 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 60/180 (33%), Positives = 95/180 (52%), Gaps = 19/180 (10%) Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239 TL M A V + GIVL+ A R G +LY+ +I G+P LI Sbjct: 31 TLLMALGAA--VLALPAGIVLASLAWRFP-------GMVRKVLYVWAEVIRGIP---LIF 78 Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299 + + + + P+L + G TV+ +AL+ +TAA + V +GL A+P GQ EA Sbjct: 79 VIFWMWYLLPLLTGGDLPGAVTVT-------LALAWFTAAAVMHSVLAGLRALPTGQYEA 131 Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359 A+ G ++ L+LLPQ +R+I+P L +++LLK++SLA V +L +V G + N+ Sbjct: 132 ALTQGFGTQQTLWLILLPQVLRTILPSLLGIFISLLKDTSLAFIVNVPELTTVAGQVNNR 191 >gi|121604974|ref|YP_982303.1| polar amino acid ABC transporter inner membrane subunit [Polaromonas naphthalenivorans CJ2] gi|120593943|gb|ABM37382.1| amino acid ABC transporter membrane protein 2, PAAT family [Polaromonas naphthalenivorans CJ2] Length = 216 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 78/220 (35%), Positives = 110/220 (50%), Gaps = 14/220 (6%) Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229 FLN L F + + V +F+ G +L FA L R + + + LYI LI Sbjct: 3 FLNLAHLKFLFDGLLWTVGLSVLAFIGGGLLG-FAVALGRLYGWRATRTAVSLYIK--LI 59 Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289 GLP LVL+ L Y F P LG VSP + +ALS Y +A++ EI R + Sbjct: 60 QGLPLLVLLPLAY---FGLPSLG-------INVSPL-AAAALALSIYVSAYLGEIWRGCI 108 Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349 +VPR Q EAA LGL + V+LPQA++ PP + ++KN+SLA A+GF +L Sbjct: 109 ESVPRTQFEAAECLGLRWHQQLLHVILPQAVKIATPPTVGFMVQIVKNTSLASAIGFVEL 168 Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 G I N T + I +I +Y +L ++L RL Sbjct: 169 ARAGQIINNSTFEPFVIFVIVAALYFALCYPLSLLSRRLE 208 >gi|311898731|dbj|BAJ31139.1| putative glutamate ABC transporter permease protein [Kitasatospora setae KM-6054] Length = 216 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 47/133 (35%), Positives = 77/133 (57%), Gaps = 2/133 (1%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 F + ALS YT +FI E++R+G+ VP GQ EAA +LG+ + LV+LPQA R++I Sbjct: 85 SFTAAVAALSVYTGSFICEVLRAGINTVPLGQAEAARSLGMGFGQTLFLVVLPQAGRAVI 144 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI-YLSLSIMIAL 383 PL S ++ L +NS++A A +L SV T + I + W+ + YL++ I+ Sbjct: 145 APLGSVFIALPRNSAVAGAFNVFELFSVQKTWTEDSAP-IFVSFFWLALAYLAIGFAISS 203 Query: 384 FMNRLNAKIALKE 396 ++ L ++A+ Sbjct: 204 VLSLLERRVAVAR 216 >gi|304440010|ref|ZP_07399903.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Peptoniphilus duerdenii ATCC BAA-1640] gi|304371502|gb|EFM25115.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Peptoniphilus duerdenii ATCC BAA-1640] Length = 556 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 56/201 (27%), Positives = 106/201 (52%), Gaps = 17/201 (8%) Query: 191 VFSFVLGIVLSLFAT-----RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH 245 V VLG+++ + T + ++F K L +Y+ ++ G P +V L Y Sbjct: 343 VLGLVLGLIVGIIRTIPESLKKGKNFVLNIFKVLANIYVQ--VLRGTPMIVQSVLVY--- 397 Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305 G F G +SP + ++ +S T A+++E+VR G+ ++ +GQ EAA +LG+ Sbjct: 398 -----FGLLQF-AGINLSP-MQAAFLVVSVNTGAYLSEVVRGGINSIDKGQFEAARSLGM 450 Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365 H + V+LPQA+++IIP + ++++ +K++S+ + +L +I+ E Sbjct: 451 NHYQTMVHVVLPQAIKNIIPAIGNEFIVNIKDTSVLNVIAVNELFFTTKSIVGGNLMYFE 510 Query: 366 IILIWMFIYLSLSIMIALFMN 386 LI IYL+L++ IA F++ Sbjct: 511 TYLITSIIYLTLTLSIAYFLH 531 >gi|311112079|ref|YP_003983301.1| amino acid ABC transporter permease [Rothia dentocariosa ATCC 17931] gi|310943573|gb|ADP39867.1| amino acid ABC superfamily ATP binding cassette transporter, permease protein [Rothia dentocariosa ATCC 17931] Length = 267 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 44/128 (34%), Positives = 77/128 (60%), Gaps = 8/128 (6%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 ++L ++A+I+E++R+GL AVP+GQ EAA +LG++H +A V++PQA R ++PPLT++ Sbjct: 137 LSLGLVSSAYISEVLRAGLQAVPKGQYEAARSLGMSHTRAMLSVIIPQAFRIVLPPLTNE 196 Query: 331 YLNLLKNSS----LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI----MIA 382 + L K+SS L V + +L G I +G + +++ YL +++ + A Sbjct: 197 VILLTKDSSLVYLLGVQIAQYELAKFGREGITASGAGLTPLVVAGLCYLIITVPLGQLSA 256 Query: 383 LFMNRLNA 390 F R A Sbjct: 257 YFEKRTGA 264 >gi|260550663|ref|ZP_05824872.1| glutamate/aspartate transporter [Acinetobacter sp. RUH2624] gi|260406374|gb|EEW99857.1| glutamate/aspartate transporter [Acinetobacter sp. RUH2624] Length = 280 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 43/123 (34%), Positives = 74/123 (60%) Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 AL YTAA ++E VR+G+ V RGQ AA A+G T ++ R V+LP A R++ P +TS+ Sbjct: 150 ALGLYTAARVSEHVRAGINTVSRGQKFAASAMGFTTAQSYRYVILPVAYRTVWPTITSEA 209 Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 +N+ KNS++ A+ + + T+ +T Q I I+++ +YL ++ I M + + Sbjct: 210 MNVFKNSAVLYALSVLNFFAYTKTMREETSQDIIILILSTPVYLIITYTIKFVMAWIEKR 269 Query: 392 IAL 394 +A+ Sbjct: 270 MAV 272 Score = 41.6 bits (96), Expect = 0.20, Method: Compositional matrix adjust. Identities = 24/69 (34%), Positives = 38/69 (55%) Query: 79 YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138 Y+ ++ + G W A + A ++G+L+G R NK +A+I YVE+FRN Sbjct: 41 YSEAPTWLQMLGSGVFTMVWTAVVAFLIAFLLGSLLGVIRTLPNKPLAFIGNCYVEIFRN 100 Query: 139 IPPLVVIFF 147 IP +V +FF Sbjct: 101 IPLIVQLFF 109 >gi|217964113|ref|YP_002349791.1| amino acid ABC transporter, permease protein [Listeria monocytogenes HCC23] gi|254832443|ref|ZP_05237098.1| hypothetical protein Lmon1_13894 [Listeria monocytogenes 10403S] gi|290893397|ref|ZP_06556382.1| amino acid ABC transporter [Listeria monocytogenes FSL J2-071] gi|217333383|gb|ACK39177.1| amino acid ABC transporter, permease protein [Listeria monocytogenes HCC23] gi|290557048|gb|EFD90577.1| amino acid ABC transporter [Listeria monocytogenes FSL J2-071] gi|307571320|emb|CAR84499.1| amino acid ABC transporter, permease protein [Listeria monocytogenes L99] Length = 213 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 39/124 (31%), Positives = 76/124 (61%), Gaps = 1/124 (0%) Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327 +++IA AA+ AEI R G +++ GQ E+A LGLT+ + R ++LPQ ++ ++P + Sbjct: 86 AVFIAFILNYAAYFAEIFRGGFLSIENGQYESAKVLGLTYGQTLRKIVLPQVVKRVLPAI 145 Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387 ++ +NL+K+SSL +G DL+ G +++ I ++L+ IYL+L+ ++ + + Sbjct: 146 GNEVINLVKDSSLVYILGIGDLLRAGKIAMSRDVTLIPLVLVAA-IYLALTAILTVLFKQ 204 Query: 388 LNAK 391 L + Sbjct: 205 LEKR 208 >gi|168462510|ref|ZP_02696441.1| L-cystine transport system permease protein TcyB [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|195633964|gb|EDX52316.1| L-cystine transport system permease protein TcyB [Salmonella enterica subsp. enterica serovar Newport str. SL317] Length = 222 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 62/207 (29%), Positives = 109/207 (52%), Gaps = 18/207 (8%) Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251 F +LG VL+L R+S + + L YIS F G P LIA + +++ P Sbjct: 32 FGLLLGFVLALM--RMSPLWLVRW---LARFYISIFR--GTP---LIAQLFMIYYGLP-- 79 Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311 QF G + P + I LS TAA+ +E +R+ + A+ +GQ EAA ++G+T + Sbjct: 80 -QF----GIELDP-IPAAMIGLSLNTAAYTSETLRAAISAIDKGQWEAAASIGMTPWQTL 133 Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371 R +LPQA R +PPL++ +++L+K++SLA + +L I ++T + + L Sbjct: 134 RRAILPQAARVALPPLSNSFISLVKDTSLAATIQVPELFRQAQLITSRTLEVFTMYLAAS 193 Query: 372 FIYLSLSIMIALFMNRLNAKIALKEKK 398 IY ++ +++ N ++ +EK+ Sbjct: 194 LIYWVMATVLSALQNYFENQLNRQEKE 220 Score = 40.4 bits (93), Expect = 0.54, Method: Compositional matrix adjust. Identities = 30/103 (29%), Positives = 49/103 (47%), Gaps = 8/103 (7%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G V T L+ GM ++G ++ R+S LV W+ R Y+ +FR P + +F + Sbjct: 15 LLKGAVFTLQLSIGGMFFGLLLGFVLALMRMSPLWLVRWLARFYISIFRGTPLIAQLFMI 74 Query: 149 YKSV----LSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187 Y + + + PIP I G+ LN + TL +A Sbjct: 75 YYGLPQFGIELDPIPAAMI----GLSLNTAAYTSETLRAAISA 113 >gi|268592304|ref|ZP_06126525.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Providencia rettgeri DSM 1131] gi|291312085|gb|EFE52538.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Providencia rettgeri DSM 1131] Length = 250 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 40/135 (29%), Positives = 80/135 (59%), Gaps = 1/135 (0%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P ++ AL+ T+A++A V++G++A+ GQ +A ++LG + + V+LPQA+R + Sbjct: 94 PGIATVVCALALITSAYLAHAVKAGILAIGAGQWQAGLSLGFSRWQVLWNVVLPQALRMM 153 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN-QTGQAIEIILIWMFIYLSLSIMIA 382 +P +Q++ L+K++SLA VG A+L + + N + +E+ L FIY + + Sbjct: 154 VPSFINQWVALIKDTSLAYVVGVAELSFLATQVNNREMVYPLEVFLFVAFIYFVMCFAVE 213 Query: 383 LFMNRLNAKIALKEK 397 + NR+ K++ + + Sbjct: 214 IIANRVATKLSAQHQ 228 >gi|149926672|ref|ZP_01914932.1| polar amino acid ABC transporter, inner membrane subunit [Limnobacter sp. MED105] gi|149824601|gb|EDM83817.1| polar amino acid ABC transporter, inner membrane subunit [Limnobacter sp. MED105] Length = 228 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 47/175 (26%), Positives = 91/175 (52%), Gaps = 15/175 (8%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 +++PL+ + IF LV + L+ + +++P + P+ S YI + Sbjct: 64 RSIPLILV----IFWFYFLVPVVLQSVMGYERP----------PQIGPD-RSAYITFIMF 108 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 AAF EI+R+G+ ++P+GQ+ AA ALGL +R ++LPQA R+++P L +Q + L + Sbjct: 109 EAAFFCEIMRAGIQSIPKGQVAAAQALGLNYRLTMAKIVLPQAFRNMLPVLLTQTIILFQ 168 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 ++SL + D + I + +E+ +YL++ +++ + L K Sbjct: 169 DTSLVYVLSVTDFLGAASKIAQRDSALVEMYTFVALVYLAICFSMSMLVKALQKK 223 >gi|327193169|gb|EGE60078.1| polar amino acid ABC transporter inner membrane subunit [Rhizobium etli CNPAF512] Length = 324 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 42/128 (32%), Positives = 76/128 (59%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +ALS A++ EI RSG+ ++ RGQ EA+ ++G R ++LPQA+ IIPP +Q Sbjct: 197 LALSLCYGAYMTEIFRSGIQSIDRGQWEASRSIGFGFGITMRKIILPQALPVIIPPTGNQ 256 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++++LK+SSL +G +L+ + T+ +T Q +E+++ +Y +SI + L R+ Sbjct: 257 FISMLKDSSLVSVIGVWELMFLARTLGQKTFQHMEMLISAAMLYWIMSIGLELIQARIER 316 Query: 391 KIALKEKK 398 A + + Sbjct: 317 HYARSKVR 324 >gi|323464072|gb|ADX76225.1| glutamine-binding periplasmic protein [Staphylococcus pseudintermedius ED99] Length = 486 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 39/131 (29%), Positives = 81/131 (61%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+ IAL +A+IAEI+R+G+ AV +GQMEAA +LGL++ + + V++PQA++ I+P Sbjct: 356 FICGAIALVINCSAYIAEIIRAGINAVDKGQMEAARSLGLSYSQTIKSVIMPQAIKKILP 415 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 L ++++ ++K SS+ +G ++++ + + +LI +Y L+ ++ M Sbjct: 416 ALGNEFVTVIKESSIVSVIGVSEIMFNAQVVQGASFDPFTPLLIAAVLYFILTFTLSRLM 475 Query: 386 NRLNAKIALKE 396 + L ++++ + Sbjct: 476 SFLEGRMSISD 486 >gi|301512791|ref|ZP_07238028.1| Binding-protein-dependent transport system inner membrane component family protein [Acinetobacter baumannii AB058] Length = 280 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 43/123 (34%), Positives = 74/123 (60%) Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 AL YTAA ++E VR+G+ V RGQ AA A+G T ++ R V+LP A R++ P +TS+ Sbjct: 150 ALGLYTAARVSEHVRAGINTVSRGQKFAASAMGFTTAQSYRYVILPVAYRTVWPTITSEA 209 Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 +N+ KNS++ A+ + + T+ +T Q I I+++ +YL ++ I M + + Sbjct: 210 MNVFKNSAVLYALSVLNFFAYTKTMREETSQDIIILILSTPVYLIITYTIKFIMAWIEKR 269 Query: 392 IAL 394 +A+ Sbjct: 270 MAV 272 Score = 43.5 bits (101), Expect = 0.060, Method: Compositional matrix adjust. Identities = 33/109 (30%), Positives = 53/109 (48%), Gaps = 14/109 (12%) Query: 63 FLSERAGFEIDQG--------IVPYTSDSSYATA------ILVGFVNTFWLAFSGMIPAT 108 F +E + +D+ ++ +S ++YA A + G W A + A Sbjct: 11 FCAESNEYGVDKAAWAESVCKVIGSSSYNAYAEAPTWLQMLGSGVFTMVWTAIVAFLIAF 70 Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLP 157 ++G+L+G R NK +A+I YVE+FRNIP +V +FF L LP Sbjct: 71 LLGSLLGVIRTLPNKPLAFIGNCYVEIFRNIPLIVQLFFWAFVFLEFLP 119 >gi|288959645|ref|YP_003449986.1| polar amino acid transport system permease protein [Azospirillum sp. B510] gi|288911953|dbj|BAI73442.1| polar amino acid transport system permease protein [Azospirillum sp. B510] Length = 229 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 60/195 (30%), Positives = 104/195 (53%), Gaps = 13/195 (6%) Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247 ++ + S LG +++ FA L R + + L Y+ F G P LV I L Y F Sbjct: 22 QLIIASLALGALVA-FAVALLRLSGNRLVEGLAGAYV--FFFRGTPLLVQIFLIY---FG 75 Query: 248 KPVLGQFNFIGGSTVSPEFMSLY----IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 LGQF+ I S + P Y +AL+ T A+ +E++R +++VP+GQ+EAA A Sbjct: 76 ---LGQFDLIKNSILWPFLREPYWCAILALTLNTGAYTSEVLRGAILSVPQGQVEAARAC 132 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363 G++ A R ++LP A+R ++P ++ + ++K +SLA + ++ + +I QT Sbjct: 133 GMSRALAFRRIVLPVAIRQMLPAYGNEVILMVKATSLASTITLMEVTGIARRMIAQTFAV 192 Query: 364 IEIILIWMFIYLSLS 378 E+ ++ IYL L+ Sbjct: 193 FELFIVAGAIYLVLN 207 >gi|256844625|ref|ZP_05550110.1| glutamine ABC transporter membrane protein [Lactobacillus crispatus 125-2-CHN] gi|262047083|ref|ZP_06020042.1| glutamine ABC transporter membrane protein [Lactobacillus crispatus MV-3A-US] gi|295692449|ref|YP_003601059.1| glutamine ABC transporter, permease protein [Lactobacillus crispatus ST1] gi|312984303|ref|ZP_07791647.1| glutamine ABC transporter (membrane protein) [Lactobacillus crispatus CTV-05] gi|256613166|gb|EEU18370.1| glutamine ABC transporter membrane protein [Lactobacillus crispatus 125-2-CHN] gi|260572660|gb|EEX29221.1| glutamine ABC transporter membrane protein [Lactobacillus crispatus MV-3A-US] gi|295030555|emb|CBL50034.1| Glutamine ABC transporter, permease protein [Lactobacillus crispatus ST1] gi|310894321|gb|EFQ43399.1| glutamine ABC transporter (membrane protein) [Lactobacillus crispatus CTV-05] Length = 217 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 63/206 (30%), Positives = 101/206 (49%), Gaps = 31/206 (15%) Query: 193 SFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPTLVLIALKYQLHF 246 SFV+G++L L ++ G + LPLL I F FGLP L Sbjct: 34 SFVVGLILGLVRYMKIKYVSAIVGFIIDIIRNLPLLLIIFFTYFGLPQL----------- 82 Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306 G +P S+ AL + A +AEIVRSG+ +V GQME A + G++ Sbjct: 83 ------------GIVTNPTTASI-AALVIFEGAMLAEIVRSGIGSVDSGQMEGARSNGMS 129 Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ-TGQAIE 365 + +A V++PQA+ ++IP L SQ+++L+K++SLA + +L+ I +Q T I Sbjct: 130 YGQAMYHVIMPQALHNMIPALLSQFVSLVKDTSLATIIVLPELLYHAQIIYSQNTTYLIP 189 Query: 366 IILIWMFIYLSLSIMIALFMNRLNAK 391 + +I +Y + ++ N L K Sbjct: 190 MYVIIAIMYFIVCFCLSTIANYLQKK 215 >gi|330945316|gb|EGH46938.1| amino acid ABC transporter permease [Pseudomonas syringae pv. pisi str. 1704B] Length = 252 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 33/81 (40%), Positives = 59/81 (72%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I + + +A+IAE+VR G+ A+P+GQ EAA A+GL + ++ LV+LPQA++ +IP + + Sbjct: 122 IGVILFQSAYIAEVVRGGMQAIPKGQYEAASAMGLGYWRSMGLVILPQALKMVIPGIVNT 181 Query: 331 YLNLLKNSSLAVAVGFADLVS 351 ++ L K++SL + +G DL++ Sbjct: 182 FIALFKDTSLVIIIGLFDLLN 202 >gi|307308379|ref|ZP_07588084.1| polar amino acid ABC transporter, inner membrane subunit [Sinorhizobium meliloti BL225C] gi|306901180|gb|EFN31787.1| polar amino acid ABC transporter, inner membrane subunit [Sinorhizobium meliloti BL225C] Length = 216 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 66/191 (34%), Positives = 95/191 (49%), Gaps = 17/191 (8%) Query: 204 ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVS 263 A L R + + L YI F G P LV + + Y F P+LG I Sbjct: 37 AVALGRTSNWAWMRGLMATYIQIFQ--GTPLLVQLFIVY---FGLPLLGLKVDI------ 85 Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 +M+L + LS +T+AF+ EI R + AVP GQ EAA ALG+ + V+LPQA R Sbjct: 86 --WMALTVGLSLHTSAFLGEIWRGSIQAVPPGQSEAARALGIGYVHRMIDVVLPQAFRIA 143 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE----IILIWMFIYLSLSI 379 +P +NL+K ++LA +G +L G + N T Q ++ + L++ FI L L+ Sbjct: 144 LPATIGFLVNLIKGTALAALLGLTELTRSGQLMANITFQPLQAYGAVGLVYFFICLPLTT 203 Query: 380 MIALFMNRLNA 390 A RLNA Sbjct: 204 FSARIERRLNA 214 >gi|293381613|ref|ZP_06627597.1| ABC transporter, permease protein [Lactobacillus crispatus 214-1] gi|290921797|gb|EFD98815.1| ABC transporter, permease protein [Lactobacillus crispatus 214-1] Length = 217 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 63/206 (30%), Positives = 101/206 (49%), Gaps = 31/206 (15%) Query: 193 SFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPTLVLIALKYQLHF 246 SFV+G++L L ++ G + LPLL I F FGLP L Sbjct: 34 SFVVGLILGLVRYMKIKYVSAIVGFIIDIIRNLPLLLIIFFTYFGLPQL----------- 82 Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306 G +P S+ AL + A +AEIVRSG+ +V GQME A + G++ Sbjct: 83 ------------GIVTNPTTASI-AALVIFEGAMLAEIVRSGIGSVDSGQMEGARSNGMS 129 Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ-TGQAIE 365 + +A V++PQA+ ++IP L SQ+++L+K++SLA + +L+ I +Q T I Sbjct: 130 YVQAMYHVIMPQALHNMIPALLSQFVSLVKDTSLATIIVLPELLYHAQIIYSQNTTYLIP 189 Query: 366 IILIWMFIYLSLSIMIALFMNRLNAK 391 + +I +Y + ++ N L K Sbjct: 190 MYVIIAIMYFIVCFCLSTIANYLQKK 215 >gi|256375588|ref|YP_003099248.1| polar amino acid ABC transporter, inner membrane subunit [Actinosynnema mirum DSM 43827] gi|255919891|gb|ACU35402.1| polar amino acid ABC transporter, inner membrane subunit [Actinosynnema mirum DSM 43827] Length = 290 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 61/212 (28%), Positives = 105/212 (49%), Gaps = 43/212 (20%) Query: 202 LFATRLSRH--------FHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ 253 L A RLS H F + +A+PLL + FGLPT I +K Sbjct: 87 LAAGRLSEHAFWRIPAGFLVEVFRAIPLLIMIFIFYFGLPT---IDIKMS---------- 133 Query: 254 FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313 +F ++ + L+ Y + +AE+ R+G+ ++PRGQ EAA ALG+ + Sbjct: 134 -----------QFTAVVLGLTLYNGSVLAEVFRAGVASLPRGQAEAAYALGMRKTQVMTQ 182 Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ----AIEIILI 369 VLLPQA+R+++P + SQ + LLK+++L + + +L+ + Q GQ + + ++ Sbjct: 183 VLLPQALRAMLPAIISQLVVLLKDTALGFIINYKELLDYTKYLGTQ-GQFGRPLVPMTIV 241 Query: 370 WMFIYLSLSIMIALFM------NRLNAKIALK 395 IY++L +++ F NR + K +K Sbjct: 242 TGAIYVALCLLLTWFAVWLEKRNRRSKKTVVK 273 >gi|284802184|ref|YP_003414049.1| hypothetical protein LM5578_1940 [Listeria monocytogenes 08-5578] gi|284995326|ref|YP_003417094.1| hypothetical protein LM5923_1891 [Listeria monocytogenes 08-5923] gi|284057746|gb|ADB68687.1| hypothetical protein LM5578_1940 [Listeria monocytogenes 08-5578] gi|284060793|gb|ADB71732.1| hypothetical protein LM5923_1891 [Listeria monocytogenes 08-5923] Length = 221 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 39/124 (31%), Positives = 76/124 (61%), Gaps = 1/124 (0%) Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327 +++IA AA+ AEI R G +++ GQ E+A LGLT+ + R ++LPQ ++ ++P + Sbjct: 94 AVFIAFILNYAAYFAEIFRGGFLSIENGQYESAKVLGLTYGQTLRKIVLPQVVKRVLPAI 153 Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387 ++ +NL+K+SSL +G DL+ G +++ I ++L+ IYL+L+ ++ + + Sbjct: 154 GNEVINLVKDSSLVYILGIGDLLRAGKIAMSRDVTLIPLVLVAA-IYLALTAILTVLFKQ 212 Query: 388 LNAK 391 L + Sbjct: 213 LEKR 216 >gi|38233733|ref|NP_939500.1| ABC transporter [Corynebacterium diphtheriae NCTC 13129] gi|38199994|emb|CAE49663.1| Putative ABC transport system membrane protein [Corynebacterium diphtheriae] Length = 314 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 36/76 (47%), Positives = 54/76 (71%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + L AA+++EIVRSG+ AVP GQ EA+ ALG++ R +LPQAMR I+PP ++ Sbjct: 146 VGLGLNEAAYMSEIVRSGIQAVPEGQTEASKALGMSWWMTIRRTVLPQAMRIIVPPTGNE 205 Query: 331 YLNLLKNSSLAVAVGF 346 +++LLK +SL VA+ + Sbjct: 206 FISLLKTTSLVVAIPY 221 >gi|322411105|gb|EFY02013.1| putative glutamine-binding periplasmic protein [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957] Length = 522 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 39/109 (35%), Positives = 65/109 (59%) Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 +S T A+++EIVR G+ AV +GQ EAA ALG TH + R ++LPQ +R+I+P ++++ Sbjct: 383 VSINTGAYMSEIVRGGIFAVDKGQFEAATALGFTHGQTMRKIVLPQVVRNILPATGNEFV 442 Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 +K++S+ + +L G T+ QT Q + I IY L+ + Sbjct: 443 INIKDTSVLNVISVVELYFSGNTVATQTYQYFQTFTIIAIIYFVLTFTV 491 >gi|291458995|ref|ZP_06598385.1| L-cystine ABC transporter, permease protein [Oribacterium sp. oral taxon 078 str. F0262] gi|291418249|gb|EFE91968.1| L-cystine ABC transporter, permease protein [Oribacterium sp. oral taxon 078 str. F0262] Length = 231 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 53/183 (28%), Positives = 89/183 (48%), Gaps = 25/183 (13%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQF-----NFIGGSTVSPEFMSLY- 270 +ALP+ T + F L L+ + + +F PVL QF +F G+ + P+ LY Sbjct: 15 RALPITLELTAVSFVLSLLLAVFIAVIDYFKVPVLRQFFALYVSFFRGTPLLPQLFLLYF 74 Query: 271 -------------------IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311 I L+ AA++ E+VR L++VP GQ EAA+A G++ + Sbjct: 75 GIPTFIKPLRSIPAIVICTIGLTLNAAAYMKEVVRGALLSVPEGQREAALAHGMSETRTM 134 Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371 ++LPQA R IP L + ++++K SS+A +G ++ + + T E +I M Sbjct: 135 TRIVLPQAARVAIPSLFNNLVDIVKGSSMAFTIGVVEITAAANLRASVTFNYFEAYMILM 194 Query: 372 FIY 374 +Y Sbjct: 195 LVY 197 >gi|188590526|ref|YP_001920426.1| L-cystine transport system permease protein TcyB [Clostridium botulinum E3 str. Alaska E43] gi|188500807|gb|ACD53943.1| L-cystine transport system permease protein TcyB [Clostridium botulinum E3 str. Alaska E43] Length = 213 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 55/194 (28%), Positives = 94/194 (48%), Gaps = 30/194 (15%) Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPT 234 +T++ + S LGIV++L T + TG + PLL + FGLPT Sbjct: 17 VTLEVFVLTLILSIPLGIVVALARTSKFLVLRKLTGIYVLIMRGTPLLLQIVVIFFGLPT 76 Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294 + + FD+ F + +A AA+ EI R+G+I++ + Sbjct: 77 M-------GITFDR-----------------FTAAILAFVLNYAAYFGEIFRAGIISIDK 112 Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354 GQ EAA LGLT++ ++LPQA++ +IPP+ ++ L+K++SL +G +L+ + Sbjct: 113 GQYEAAEMLGLTYKDTFFRIILPQAIKRVIPPVANEITTLIKDTSLVYIIGLDELLKIAK 172 Query: 355 TIINQTGQAIEIIL 368 N+ I +IL Sbjct: 173 IASNRDVTLIPLIL 186 >gi|148273811|ref|YP_001223372.1| putative polar amino acid ABC transporterpermease [Clavibacter michiganensis subsp. michiganensis NCPPB 382] gi|147831741|emb|CAN02710.1| putative polar amino acid ABC transporter,permease component [Clavibacter michiganensis subsp. michiganensis NCPPB 382] Length = 221 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 63/224 (28%), Positives = 112/224 (50%), Gaps = 21/224 (9%) Query: 177 SFPTLTMDT---NAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233 SF L ++T + + +F LG+ ++L L R + + + YIS ++ G P Sbjct: 11 SFGPLALETIRGTIPLALVTFALGLAIAL-GLALMRLYGNRLVSGIARFYIS--VVRGTP 67 Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293 LV + + + + P +G V P + S IALS + AEI+R+ +++VP Sbjct: 68 LLVQL---FVIFYGLPSIG--------VVLPPWPSAVIALSVNVGGYAAEIIRASILSVP 116 Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353 RGQ EA +G++ R +++PQA R +PPL++ +++L+K++SLA + +L Sbjct: 117 RGQWEAGHTIGMSRALTLRRIIVPQAARVSVPPLSNTFISLVKDTSLASVILVTELFKQA 176 Query: 354 GTIINQTGQ----AIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393 I + T + +E LI+ + L LS RL+ +A Sbjct: 177 QLIASSTFEYMLLYLEAALIYWLVCLVLSFAQTRLERRLDRYVA 220 >gi|71737926|ref|YP_274852.1| amino acid ABC transporter permease [Pseudomonas syringae pv. phaseolicola 1448A] gi|289627188|ref|ZP_06460142.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289648678|ref|ZP_06480021.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. aesculi str. 2250] gi|71558479|gb|AAZ37690.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. phaseolicola 1448A] gi|320324043|gb|EFW80126.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. glycinea str. B076] gi|320329012|gb|EFW85011.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. glycinea str. race 4] gi|330868025|gb|EGH02734.1| amino acid ABC transporter permease [Pseudomonas syringae pv. aesculi str. 0893_23] gi|330985343|gb|EGH83446.1| amino acid ABC transporter permease [Pseudomonas syringae pv. lachrymans str. M301315] Length = 220 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 43/129 (33%), Positives = 73/129 (56%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + I L+ + + ++EIVR L A+P GQ+EA A+GL ++ R VLLPQAMR I+P Sbjct: 91 FQAGAIGLTLFCGSHVSEIVRGALQAIPAGQLEAGKAIGLRFNQSLRYVLLPQAMRQILP 150 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 + ++K S+L +G A+L+ +I +T +E L F++ ++ I L Sbjct: 151 TWVNSSTEIVKASTLLSVIGVAELLLSTQQVIARTFMTLEFYLFAGFLFFLINYAIELLG 210 Query: 386 NRLNAKIAL 394 ++ ++AL Sbjct: 211 RQIEKRVAL 219 >gi|296110979|ref|YP_003621360.1| glutamine ABC transporter, permease protein [Leuconostoc kimchii IMSNU 11154] gi|295832510|gb|ADG40391.1| glutamine ABC transporter, permease protein [Leuconostoc kimchii IMSNU 11154] Length = 219 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 56/178 (31%), Positives = 92/178 (51%), Gaps = 25/178 (14%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 + LPLL I F+ F LP K +H P F + IA+S + Sbjct: 66 RNLPLLLIIFFVYFALP-------KIGIHL-----------------PIFWATVIAMSTF 101 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 +A +AEIVR GL +V GQ E A A GL++ + ++LPQA + +IPP+ SQ ++L+K Sbjct: 102 ESAMLAEIVRGGLESVDIGQFEGARANGLSNMQTMIYIILPQAYKRMIPPIISQLISLVK 161 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM-FIYLSLSIMIALFMNRLNAKIA 393 ++SLA+ + +++ G + Q I +LI + +Y L+ ++L + K+A Sbjct: 162 DTSLAMGIVLSEMTYRGQIVYAQNSTYIIPVLIAITLVYFLLNYGLSLIARWADHKLA 219 >gi|294084530|ref|YP_003551288.1| ABC transporter permease [Candidatus Puniceispirillum marinum IMCC1322] gi|292664103|gb|ADE39204.1| ABC transporter permease protein [Candidatus Puniceispirillum marinum IMCC1322] Length = 224 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 34/127 (26%), Positives = 72/127 (56%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F++ + + + AF AEI R+G++++ GQ EAA A+G+ + +A R ++LPQA++ + P Sbjct: 90 FLAAALTFTIQSGAFFAEIFRAGIVSIEHGQWEAAKAIGMRYNQAMRRIILPQAVKRMFP 149 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 + + + L+K ++L V +ADL+ + +T + +E+ + IY + + Sbjct: 150 SMMERSIELMKTTTLVATVSYADLLFQANELAQKTFRPLEVFTVVALIYFVTISIFSFLA 209 Query: 386 NRLNAKI 392 +R ++ Sbjct: 210 SRFERRL 216 Score = 43.1 bits (100), Expect = 0.074, Method: Compositional matrix adjust. Identities = 22/77 (28%), Positives = 42/77 (54%), Gaps = 3/77 (3%) Query: 73 DQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVY 132 + +P +++ + +L GF NT L + + ++G ++ RLS+ + V + V Sbjct: 3 EWDFIPVLTETGF---LLAGFRNTLVLTATALSGGLVVGLVLAFARLSSRRWVRFPADVI 59 Query: 133 VEVFRNIPPLVVIFFLY 149 +EVFR PPLV +F+ + Sbjct: 60 IEVFRTTPPLVQLFWFF 76 >gi|19745969|ref|NP_607105.1| putative ABC transporter (permease) [Streptococcus pyogenes MGAS8232] gi|19748129|gb|AAL97604.1| putative ABC transporter (permease) [Streptococcus pyogenes MGAS8232] Length = 216 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 41/131 (31%), Positives = 74/131 (56%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P + Y+ S +AA+I+E+ RS + A+ +GQ EAA ALGL + + ++LPQA R Sbjct: 85 PALLCAYLGFSMVSAAYISEVFRSSIEAIDKGQWEAAKALGLPYALMVKKIILPQAFRIA 144 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 +PPL + ++++K+SSLA + D+ I + + + ++ FIY ++ ++ Sbjct: 145 VPPLGNVIIDMVKSSSLAAMITVPDIFQNAKIIGGREWDYMSMYILVAFIYWLIAFLLER 204 Query: 384 FMNRLNAKIAL 394 + L K+AL Sbjct: 205 YQEFLENKLAL 215 >gi|50121693|ref|YP_050860.1| glutamine ABC transporter permease [Pectobacterium atrosepticum SCRI1043] gi|49612219|emb|CAG75669.1| glutamine transport system permease protein [Pectobacterium atrosepticum SCRI1043] Length = 219 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 40/129 (31%), Positives = 76/129 (58%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + + + + A+IAEI R ++++ G EA +ALGL+ R V+ P A+R ++P Sbjct: 90 FAAAVVTIMINSGAYIAEITRGSVLSIHNGFREAGLALGLSRSATLRHVIAPLALRRMLP 149 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PL +Q++ +K++SL + +G A+L G II +A+EI IYL ++++++ + Sbjct: 150 PLGNQWIISIKDTSLFIVIGVAELTRSGQEIIAGNFRALEIWTAVAIIYLCITLVLSFIL 209 Query: 386 NRLNAKIAL 394 RL ++ + Sbjct: 210 RRLERRLKI 218 >gi|330971239|gb|EGH71305.1| amino acid ABC transporter permease [Pseudomonas syringae pv. aceris str. M302273PT] Length = 220 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 47/164 (28%), Positives = 88/164 (53%), Gaps = 11/164 (6%) Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292 P LVLI L Y F P LG + S + LS Y ++ E+ R+GL+++ Sbjct: 68 PILVLILLIY---FALPGLG--------IRLDKLASFIVTLSLYAGTYLTEVFRAGLLSI 116 Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352 +GQ EA +A+GL + +++P +R+++P L++ +++L K++SLA A+ +L Sbjct: 117 HKGQREAGLAIGLGEWQVRAYIIVPVMLRNVLPALSNNFISLFKDTSLAAAIAVPELTYY 176 Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 I ++ + IE L+ +Y+ +IAL + L ++A++ Sbjct: 177 ARKINVESYRVIETWLVTTALYVVACYVIALLLRTLEQRLAIRR 220 >gi|260555282|ref|ZP_05827503.1| glutamate/aspartate transporter [Acinetobacter baumannii ATCC 19606] gi|260411824|gb|EEX05121.1| glutamate/aspartate transporter [Acinetobacter baumannii ATCC 19606] Length = 280 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 43/123 (34%), Positives = 74/123 (60%) Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 AL YTAA ++E VR+G+ V RGQ AA A+G T ++ R V+LP A R++ P +TS+ Sbjct: 150 ALGLYTAARVSEHVRAGINTVSRGQKFAASAMGFTTAQSYRYVILPVAYRTVWPTITSEA 209 Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 +N+ KNS++ A+ + + T+ +T Q I I+++ +YL ++ I M + + Sbjct: 210 MNVFKNSAVLYALSVLNFFAYTKTMREETSQDIIILILSTPVYLIITYTIKFIMAWIEKR 269 Query: 392 IAL 394 +A+ Sbjct: 270 MAV 272 Score = 42.0 bits (97), Expect = 0.18, Method: Compositional matrix adjust. Identities = 30/99 (30%), Positives = 50/99 (50%), Gaps = 14/99 (14%) Query: 63 FLSERAGFEIDQG--------IVPYTSDSSYATA------ILVGFVNTFWLAFSGMIPAT 108 F +E + +D+ ++ +S ++YA A + G W A + A Sbjct: 11 FCAESNEYGVDKAAWAESVCKVIGSSSYNAYAEAPTWLQMLGSGVFTMVWTAIVAFLIAF 70 Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147 ++G+L+G R NK +A+I YVE+FRNIP +V +FF Sbjct: 71 LLGSLLGVIRTLPNKPLAFIGNCYVEIFRNIPLIVQLFF 109 >gi|253576692|ref|ZP_04854019.1| polar amino acid ABC transporter [Paenibacillus sp. oral taxon 786 str. D14] gi|251843902|gb|EES71923.1| polar amino acid ABC transporter [Paenibacillus sp. oral taxon 786 str. D14] Length = 220 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 38/128 (29%), Positives = 76/128 (59%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I LS ++A++AEI R+G+ V RGQ EAA +LG+T A R +++PQA++S++P + ++ Sbjct: 93 ITLSINSSAYLAEIFRAGIQGVDRGQGEAARSLGMTKGMAMRHIIIPQAIKSVLPAIGNE 152 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++ ++K SS+ +G A+L+ +++ T + LI +Y L+ ++ + Sbjct: 153 FITIIKESSIVSIIGTAELIYQAQSVVTITYDGMTPYLIIAIMYFILTFTLSRILGVFER 212 Query: 391 KIALKEKK 398 K+ + + Sbjct: 213 KLKTSDHR 220 >gi|254464309|ref|ZP_05077720.1| amino acid ABC transporter, permease protein [Rhodobacterales bacterium Y4I] gi|206685217|gb|EDZ45699.1| amino acid ABC transporter, permease protein [Rhodobacterales bacterium Y4I] Length = 432 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 38/96 (39%), Positives = 65/96 (67%), Gaps = 1/96 (1%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+ + I ++ ++AA+IAE++R GL A+P+GQ EAA +LGL + +A RL++LPQA++ IP Sbjct: 297 FLRVVIMITMFSAAYIAEVIRGGLAALPKGQYEAADSLGLDYAQAMRLIILPQALKISIP 356 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVS-VGGTIINQT 360 + + + L K+++L + DLV + G I+ T Sbjct: 357 GIVNVAVGLFKDTTLVSVISMFDLVGMIRGPILAST 392 >gi|160899823|ref|YP_001565405.1| polar amino acid ABC transporter inner membrane protein [Delftia acidovorans SPH-1] gi|160365407|gb|ABX37020.1| polar amino acid ABC transporter, inner membrane subunit [Delftia acidovorans SPH-1] Length = 266 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 68/211 (32%), Positives = 110/211 (52%), Gaps = 18/211 (8%) Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALK 241 T+ ++A V + LG+VL A RL+R + P + + FL G PTL+LI Sbjct: 73 TLASSAMAAVIALSLGLVL--LAGRLARPRIVR----WPSIAVIEFL-RGTPTLLLI--- 122 Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301 Y P G I T ++L I LS TAA +AE+ R+G++AVPRGQ +AA Sbjct: 123 YVCFLVLPAAG----IKLGTY--WMLTLPIGLS--TAAVVAEVYRAGVLAVPRGQTDAAR 174 Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361 +LGLT + R V+ PQA+R I+P L +Q + ++K+++ V + +L+ +I Sbjct: 175 SLGLTEVQVFRFVVFPQALRYIVPALVAQLVIVVKDTTFGYIVTYGELMQNAKVLIANYH 234 Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 + + L+ +Y ++ I+ RLN + Sbjct: 235 ALVPVYLVVAVLYCLVNYAISRASRRLNRPV 265 >gi|323126570|gb|ADX23867.1| putative glutamine-binding periplasmic protein [Streptococcus dysgalactiae subsp. equisimilis ATCC 12394] Length = 522 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 39/109 (35%), Positives = 65/109 (59%) Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 +S T A+++EIVR G+ AV +GQ EAA ALG TH + R ++LPQ +R+I+P ++++ Sbjct: 383 VSINTGAYMSEIVRGGIFAVDKGQFEAATALGFTHGQTMRKIVLPQVVRNILPATGNEFV 442 Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 +K++S+ + +L G T+ QT Q + I IY L+ + Sbjct: 443 INIKDTSVLNVISVVELYFSGNTVATQTYQYFQTFTIIAIIYFVLTFTV 491 >gi|311031016|ref|ZP_07709106.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus sp. m3-13] Length = 222 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 33/92 (35%), Positives = 65/92 (70%), Gaps = 1/92 (1%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G T+ P ++ +A + A+I+E++R+G++AV +GQ EAA+ALG+ +R+ + ++LPQ Sbjct: 86 GITLEPVTAAI-LAFGLNSGAYISEVIRAGIMAVDKGQREAAMALGVPYRQMMKDIILPQ 144 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 A+++I+P L ++Y+ L K S++ +G D++ Sbjct: 145 ALKNILPALMNEYITLTKESAIVTVIGVMDVM 176 >gi|255310930|ref|ZP_05353500.1| putative ABC-membrane transport protein, inner membrane component [Chlamydia trachomatis 6276] gi|255317230|ref|ZP_05358476.1| putative ABC-membrane transport protein, inner membrane component [Chlamydia trachomatis 6276s] Length = 214 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 68/204 (33%), Positives = 106/204 (51%), Gaps = 14/204 (6%) Query: 189 IFVFSFVLGIVLSL-FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247 I S V G VL T SR+F + K L Y+ + G P + I + Y F Sbjct: 21 ITAISLVCGFVLGWGIGTVNSRYFPCRISKFLGNFYVVA--VRGTPLFIQILIVY---FG 75 Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307 P L + N +SP L IAL+ +AA++AE VR+G+ A+P Q EAA LG T Sbjct: 76 LPSLIKVN------LSPLVAGL-IALTLNSAAYLAENVRAGINALPVQQWEAAKVLGYTG 128 Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367 + +L PQ ++I+P LT+++++L+K SS+ + VG +L V I+ + +E+ Sbjct: 129 PQIFLHILCPQVFKNILPSLTNEFVSLIKESSILMVVGVPELTKVTKDIVARELNPMEMY 188 Query: 368 LIWMFIYLSLSIMIALFMNRLNAK 391 LI +YL ++ + F RL+ K Sbjct: 189 LICAGLYLIMTSAFSYFA-RLSEK 211 >gi|139473094|ref|YP_001127809.1| glutamine ABC transporter, glutamine-binding protein/permease protein [Streptococcus pyogenes str. Manfredo] gi|134271340|emb|CAM29558.1| glutamine ABC transporter, glutamine-binding protein/permease protein [Streptococcus pyogenes str. Manfredo] Length = 522 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 39/119 (32%), Positives = 68/119 (57%) Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 +S T A+++EIVR G+ AV +GQ EAA ALG TH + R ++LPQ +R+I+P ++++ Sbjct: 383 VSINTGAYMSEIVRGGIFAVDKGQFEAATALGFTHGQTMRKIVLPQVVRNILPATGNEFV 442 Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 +K++S+ + +L G T+ QT Q + I IY L+ + + + + Sbjct: 443 INIKDTSVLNVISVVELYFSGNTVATQTYQYFQTFTIIAIIYFVLTFTVTRILRHIERR 501 >gi|254253996|ref|ZP_04947313.1| ABC-type amino acid transport system permease component [Burkholderia dolosa AUO158] gi|124898641|gb|EAY70484.1| ABC-type amino acid transport system permease component [Burkholderia dolosa AUO158] Length = 218 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 68/217 (31%), Positives = 110/217 (50%), Gaps = 18/217 (8%) Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240 +T++ A FV S VLG+VL+L +R + + I GLP +V + Sbjct: 19 VTIEITACAFVLSSVLGLVLALLKVSRNRAVSAAGSTIVNV-------IRGLPIIVQL-- 69 Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300 + ++F P LG + S + L IA S Y A E R+G+ A+ RGQ+EAA Sbjct: 70 -FYMYFVLPDLG----VQLSAFQAGVLGLGIAYSAYQA----ENFRAGIEAIDRGQIEAA 120 Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 A+G+ R V+LPQA R +PP + + LLK+SS+A + A++ G I + T Sbjct: 121 HAIGMRGPMIMRRVVLPQAFRIALPPYGNTLVMLLKDSSVASTITVAEITRAGQLIASST 180 Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 Q + + + +YL+L + + +NRL ++AL+ Sbjct: 181 FQNMSVYTLVALLYLALGLPLMFGVNRLGKRLALRRS 217 >gi|330988311|gb|EGH86414.1| amino acid ABC transporter permease [Pseudomonas syringae pv. lachrymans str. M301315] Length = 365 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 33/81 (40%), Positives = 59/81 (72%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I + + +A+IAE+VR G+ A+P+GQ EAA A+GL + ++ LV+LPQA++ +IP + + Sbjct: 235 IGVILFQSAYIAEVVRGGMQAIPKGQYEAASAMGLGYWRSMGLVILPQALKMVIPGIVNT 294 Query: 331 YLNLLKNSSLAVAVGFADLVS 351 ++ L K++SL + +G DL++ Sbjct: 295 FIALFKDTSLVIIIGLFDLLN 315 >gi|309799781|ref|ZP_07693993.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus infantis SK1302] gi|308116601|gb|EFO54065.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus infantis SK1302] Length = 521 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 38/109 (34%), Positives = 66/109 (60%) Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 +S T A++ EIVR G+++V +GQ EAA ALG+TH + R ++LPQ +R+I+P ++++ Sbjct: 384 VSINTGAYMTEIVRGGILSVDKGQFEAATALGMTHNQTMRKIVLPQVVRNILPATGNEFV 443 Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 +K++S+ + +L G T+ QT Q + I IY L+ + Sbjct: 444 INIKDTSVLNVISVVELYFSGNTVATQTYQYFQTFTIIAVIYFVLTFTV 492 >gi|227115307|ref|ZP_03828963.1| glutamine ABC transporter permease protein [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 219 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 40/129 (31%), Positives = 76/129 (58%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + + + + A+IAEI R ++++ G EA +ALGL+ R V+ P A+R ++P Sbjct: 90 FAAAVVTIMINSGAYIAEITRGSVLSIHNGFREAGLALGLSRSATLRHVIAPLALRRMLP 149 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PL +Q++ +K++SL + +G A+L G II +A+EI IYL ++++++ + Sbjct: 150 PLGNQWIISIKDTSLFIVIGVAELTRSGQEIIAGNFRALEIWTAVAIIYLCITLVLSFIL 209 Query: 386 NRLNAKIAL 394 RL ++ + Sbjct: 210 RRLERRLKI 218 >gi|148379388|ref|YP_001253929.1| amino acid ABC transporter permease [Clostridium botulinum A str. ATCC 3502] gi|153931051|ref|YP_001383764.1| His/Glu/Gln/Arg/opine ABC transporter permease [Clostridium botulinum A str. ATCC 19397] gi|153935865|ref|YP_001387314.1| His/Glu/Gln/Arg/opine ABC transporter permease [Clostridium botulinum A str. Hall] gi|148288872|emb|CAL82956.1| putative ABC transporter, permease protein [Clostridium botulinum A str. ATCC 3502] gi|152927095|gb|ABS32595.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Clostridium botulinum A str. ATCC 19397] gi|152931779|gb|ABS37278.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Clostridium botulinum A str. Hall] gi|322805728|emb|CBZ03293.1| polar amino acid ABC transporter, inner membrane subunit [Clostridium botulinum H04402 065] Length = 219 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 39/124 (31%), Positives = 73/124 (58%), Gaps = 3/124 (2%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I L+ AA+++EI+R+ +I++ RGQ EA +LG T + ++LPQA++ +PPL + Sbjct: 94 IGLALNGAAYMSEIIRAAIISIDRGQEEAGFSLGYTRFQNLYYIILPQAVKISVPPLVNG 153 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL---FMNR 387 + +LLK++SL + +L G I ++T + E+ L Y L+ ++++ F+ + Sbjct: 154 FSSLLKDTSLVSVISITELTRSGNLIYSRTAKPFEVYLTLGLFYFVLTYIVSICSKFIEK 213 Query: 388 LNAK 391 N K Sbjct: 214 RNEK 217 >gi|50913614|ref|YP_059586.1| ABC transporter amino acid-binding protein [Streptococcus pyogenes MGAS10394] gi|50902688|gb|AAT86403.1| ABC transporter amino acid-binding protein [Streptococcus pyogenes MGAS10394] Length = 528 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 39/119 (32%), Positives = 68/119 (57%) Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 +S T A+++EIVR G+ AV +GQ EAA ALG TH + R ++LPQ +R+I+P ++++ Sbjct: 389 VSINTGAYMSEIVRGGIFAVDKGQFEAATALGFTHGQTMRKIVLPQVVRNILPATGNEFV 448 Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 +K++S+ + +L G T+ QT Q + I IY L+ + + + + Sbjct: 449 INIKDTSVLNVISVVELYFSGNTVATQTYQYFQTFTIIAIIYFVLTFTVTRILRHIERR 507 >gi|257877476|ref|ZP_05657129.1| amino acid ABC transporter [Enterococcus casseliflavus EC20] gi|257811642|gb|EEV40462.1| amino acid ABC transporter [Enterococcus casseliflavus EC20] Length = 226 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 54/162 (33%), Positives = 82/162 (50%), Gaps = 20/162 (12%) Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT---AAFIAEIVRS 287 G+P LVL+ L L+F P + +L A+ C+T +AFI EI R Sbjct: 67 GVPALVLLFL---LYFGLPY--------------QLSALSAAIICFTLTSSAFIGEIYRG 109 Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347 + V RGQ +AA ALGL+ K RL++LPQA R +P L++ ++LLK +SLA + Sbjct: 110 SIAGVDRGQFDAAYALGLSFTKTMRLIILPQAFRISVPALSNVAMDLLKGTSLAAMITIP 169 Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 D+ + +T + + ++ IY L I+I RL Sbjct: 170 DIFQKAKIVGGRTFDYMSMYVLVAIIYWLLCILIEAGQKRLE 211 >gi|229816603|ref|ZP_04446901.1| hypothetical protein COLINT_03660 [Collinsella intestinalis DSM 13280] gi|229807809|gb|EEP43613.1| hypothetical protein COLINT_03660 [Collinsella intestinalis DSM 13280] Length = 261 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 35/80 (43%), Positives = 55/80 (68%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + + Y AA++AE++R+G+ AVPRGQMEAA + G + + ++LPQ + I+PPL +Q Sbjct: 108 LGVGLYHAAYVAEVIRTGIEAVPRGQMEAAQSQGFSRLQTYAYIVLPQTFKIILPPLCNQ 167 Query: 331 YLNLLKNSSLAVAVGFADLV 350 LNL+KN+S+ V DL+ Sbjct: 168 ALNLVKNTSVLALVAGGDLM 187 >gi|167588266|ref|ZP_02380654.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ubonensis Bu] Length = 229 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 78/237 (32%), Positives = 120/237 (50%), Gaps = 28/237 (11%) Query: 169 MFLNNRGLSFPTL------TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222 MFL N P L T++ A FV S VLG+VL+L ++SR+ T Sbjct: 12 MFLQNALDFLPILLKGAIVTIEITACAFVLSSVLGLVLALL--KVSRNPLVSTAG----- 64 Query: 223 YISTFL--IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280 ST + I GLP +V + + ++F P LG + S + L IA S Y A Sbjct: 65 --STIVNVIRGLPIIVQL---FYMYFVLPDLG----VQLSAFQAGVLGLGIAYSAYQA-- 113 Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340 E R+G+ A+ RGQ+EAA A+G+ R V+LPQA R +PP + + LLK+SS+ Sbjct: 114 --ENFRAGIEAIDRGQIEAAHAIGMRGPMIMRRVVLPQAFRIALPPYGNTLVMLLKDSSV 171 Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 A + A++ G I + T Q + + + +YL+L + + +NRL ++AL+ Sbjct: 172 ASTITVAEITRAGQLIASSTFQNMSVYTLVALLYLALGLPLMFGVNRLGKRLALRRS 228 >gi|33598571|ref|NP_886214.1| glutamate/aspartate transport system permease protein [Bordetella parapertussis 12822] gi|33574700|emb|CAE39357.1| glutamate/aspartate transport system permease protein [Bordetella parapertussis] Length = 253 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 44/129 (34%), Positives = 73/129 (56%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+ + L YT++ +AE VR+G+ + P GQ AA ALG+ + R VLLP + R I+P Sbjct: 109 FIPAVLCLGFYTSSRVAEQVRAGIESRPAGQRMAATALGMRPSQVYRYVLLPTSFRIILP 168 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PLTS+ LNL+KN+S+A + +LV ++ + Q E Y L++++ M Sbjct: 169 PLTSELLNLIKNTSVAFTIDLLELVGAARSMQEFSFQVFEAFAGATLCYFLLNLIVLRAM 228 Query: 386 NRLNAKIAL 394 + ++A+ Sbjct: 229 RYIETRLAV 237 Score = 43.5 bits (101), Expect = 0.060, Method: Compositional matrix adjust. Identities = 33/91 (36%), Positives = 44/91 (48%), Gaps = 4/91 (4%) Query: 85 YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144 Y +L G T A I A IG +VG R + +K + YVE FRNIP LV Sbjct: 20 YLGTLLTGMAWTLGTAALAWILALGIGIVVGVARTTQSKWARIMGATYVEFFRNIPLLVQ 79 Query: 145 IFFLYKSVLSVLPI----PDHSIVLPFGMFL 171 +F Y V +LP+ SI P+G+F+ Sbjct: 80 MFLWYFVVPEILPVQLGDAIKSIPPPWGIFI 110 >gi|67923501|ref|ZP_00516976.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Crocosphaera watsonii WH 8501] gi|67854643|gb|EAM49927.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Crocosphaera watsonii WH 8501] Length = 391 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 37/86 (43%), Positives = 57/86 (66%) Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 + ++AA++AE VR GL +VP+GQ EAA ALGL V+LPQA+R +IP + Q+ Sbjct: 269 GFTLFSAAYLAENVRGGLQSVPKGQTEAAKALGLNGFFVLIFVVLPQALRVVIPAIVGQF 328 Query: 332 LNLLKNSSLAVAVGFADLVSVGGTII 357 ++L K++SL VG DL+ + +I+ Sbjct: 329 ISLFKDTSLLAIVGLVDLLGMSQSIL 354 >gi|16803780|ref|NP_465265.1| hypothetical protein lmo1740 [Listeria monocytogenes EGD-e] gi|47095666|ref|ZP_00233273.1| amino acid ABC transporter, permease protein [Listeria monocytogenes str. 1/2a F6854] gi|224499540|ref|ZP_03667889.1| hypothetical protein LmonF1_07517 [Listeria monocytogenes Finland 1988] gi|224503335|ref|ZP_03671642.1| hypothetical protein LmonFR_12615 [Listeria monocytogenes FSL R2-561] gi|254829262|ref|ZP_05233949.1| amino acid ABC transporter [Listeria monocytogenes FSL N3-165] gi|254900755|ref|ZP_05260679.1| hypothetical protein LmonJ_13104 [Listeria monocytogenes J0161] gi|254938146|ref|ZP_05269843.1| amino acid ABC transporter [Listeria monocytogenes F6900] gi|16411194|emb|CAC99818.1| lmo1740 [Listeria monocytogenes EGD-e] gi|47015951|gb|EAL06877.1| amino acid ABC transporter, permease protein [Listeria monocytogenes str. 1/2a F6854] gi|258601674|gb|EEW14999.1| amino acid ABC transporter [Listeria monocytogenes FSL N3-165] gi|258610760|gb|EEW23368.1| amino acid ABC transporter [Listeria monocytogenes F6900] Length = 213 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 39/124 (31%), Positives = 76/124 (61%), Gaps = 1/124 (0%) Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327 +++IA AA+ AEI R G +++ GQ E+A LGLT+ + R ++LPQ ++ ++P + Sbjct: 86 AVFIAFILNYAAYFAEIFRGGFLSIENGQYESAKVLGLTYGQTLRKIVLPQVVKRVLPAI 145 Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387 ++ +NL+K+SSL +G DL+ G +++ I ++L+ IYL+L+ ++ + + Sbjct: 146 GNEVINLVKDSSLVYILGIGDLLRAGKIAMSRDVTLIPLVLVAA-IYLALTAILTVLFKQ 204 Query: 388 LNAK 391 L + Sbjct: 205 LEKR 208 >gi|289435076|ref|YP_003464948.1| amino acid ABC transporter, permease protein [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|289171320|emb|CBH27862.1| amino acid ABC transporter, permease protein [Listeria seeligeri serovar 1/2b str. SLCC3954] Length = 213 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 39/124 (31%), Positives = 76/124 (61%), Gaps = 1/124 (0%) Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327 +++IA AA+ AEI R G +++ GQ E+A LGLT+ + R ++LPQ ++ ++P + Sbjct: 86 AVFIAFILNYAAYFAEIFRGGFLSIENGQYESAKVLGLTYGQTLRKIVLPQVVKRVLPAI 145 Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387 ++ +NL+K+SSL +G DL+ G +++ I ++L+ IYL+L+ ++ + + Sbjct: 146 GNEVINLVKDSSLVYILGIGDLLRAGKIAMSRDVTLIPLVLVAA-IYLALTAILTVLFKQ 204 Query: 388 LNAK 391 L + Sbjct: 205 LEKR 208 >gi|226306243|ref|YP_002766203.1| glutamate ABC transporter permease protein [Rhodococcus erythropolis PR4] gi|226185360|dbj|BAH33464.1| glutamate ABC transporter permease protein [Rhodococcus erythropolis PR4] Length = 226 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 48/129 (37%), Positives = 68/129 (52%), Gaps = 12/129 (9%) Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279 PL I F +FGL + + L D P N F + LS YTAA Sbjct: 62 PLTLILLFCLFGLSQTLGVNLAKS---DSPTFLTDN---------NFRLAVLGLSVYTAA 109 Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339 F+ E +RSG+ VP GQ EA +LGL+ + RL++LPQA R++ PL S + L KNS+ Sbjct: 110 FVCESLRSGINTVPVGQAEAGRSLGLSFAQNLRLIVLPQAFRAVTAPLGSVLIALTKNST 169 Query: 340 LAVAVGFAD 348 +A +G ++ Sbjct: 170 IAAVIGVSE 178 Score = 41.6 bits (96), Expect = 0.21, Method: Compositional matrix adjust. Identities = 27/68 (39%), Positives = 36/68 (52%), Gaps = 1/68 (1%) Query: 83 SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP-P 141 S Y IL F T L F I A IIG L+ A R+S + ++ YV VFRN P Sbjct: 5 SKYGDQILEAFWTTIQLTFFSAIGAVIIGVLIAAMRVSPVPVARFLGTAYVTVFRNTPLT 64 Query: 142 LVVIFFLY 149 L+++F L+ Sbjct: 65 LILLFCLF 72 >gi|148642866|ref|YP_001273379.1| polar amino acid ABC transporter, permease component [Methanobrevibacter smithii ATCC 35061] gi|222445099|ref|ZP_03607614.1| hypothetical protein METSMIALI_00718 [Methanobrevibacter smithii DSM 2375] gi|261350333|ref|ZP_05975750.1| ABC transporter, permease protein, polar amino acid uptake family [Methanobrevibacter smithii DSM 2374] gi|148551883|gb|ABQ87011.1| polar amino acid ABC transporter, permease component [Methanobrevibacter smithii ATCC 35061] gi|222434664|gb|EEE41829.1| hypothetical protein METSMIALI_00718 [Methanobrevibacter smithii DSM 2375] gi|288861117|gb|EFC93415.1| ABC transporter, permease protein, polar amino acid uptake family [Methanobrevibacter smithii DSM 2374] Length = 216 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 38/139 (27%), Positives = 84/139 (60%), Gaps = 3/139 (2%) Query: 256 FIGGSTVSPEF--MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313 ++ G+++SP++ +S+ IA S +A+ AEI R G+ A+P+GQ EAA LG + + Sbjct: 75 YVFGASLSPDYRMISVIIAFSINYSAYFAEIYRGGIEAIPKGQYEAAQVLGYNKLETFFI 134 Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI 373 ++LPQ ++ ++P +T++ + L+K++SL+ + ++ +V I + +++ +F Sbjct: 135 IILPQVIKIVLPSITNEVITLVKDTSLSFVIAIPEMFTVAKQIAAAEASIMALLIAGVFY 194 Query: 374 YLSLSIMIALFMNRLNAKI 392 Y+ ++++A M + K+ Sbjct: 195 YI-FNVIVAFVMEYIEEKL 212 >gi|325568891|ref|ZP_08145184.1| polar amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus casseliflavus ATCC 12755] gi|325157929|gb|EGC70085.1| polar amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus casseliflavus ATCC 12755] Length = 226 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 54/162 (33%), Positives = 82/162 (50%), Gaps = 20/162 (12%) Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT---AAFIAEIVRS 287 G+P LVL+ L L+F P + +L A+ C+T +AFI EI R Sbjct: 67 GVPALVLLFL---LYFGLPY--------------QLSALSAAIICFTLTSSAFIGEIYRG 109 Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347 + V RGQ +AA ALGL+ K RL++LPQA R +P L++ ++LLK +SLA + Sbjct: 110 SIAGVDRGQFDAAYALGLSFTKTMRLIILPQAFRISVPALSNVAMDLLKGTSLAAMITIP 169 Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 D+ + +T + + ++ IY L I+I RL Sbjct: 170 DIFQKAKIVGGRTFDYMSMYVLVAIIYWLLCILIEAGQKRLE 211 >gi|319638304|ref|ZP_07993067.1| amino acid permease integral membrane protein [Neisseria mucosa C102] gi|317400577|gb|EFV81235.1| amino acid permease integral membrane protein [Neisseria mucosa C102] Length = 238 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 36/121 (29%), Positives = 67/121 (55%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I S A+ +E +R+ +++VP+GQ EA ++G+T+ + R ++ PQA R +PPL+++ Sbjct: 111 IGFSLNVGAYASETIRAAILSVPKGQWEAGFSIGMTYMQTFRRIIAPQAFRVAVPPLSNE 170 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++ L KN+SLA V +L V N+T + + + +Y ++ L RL Sbjct: 171 FIGLFKNTSLAAVVTVTELFRVAQETANRTYDFLPVYIEAALVYWCFCKVLFLIQARLEK 230 Query: 391 K 391 + Sbjct: 231 R 231 >gi|302024477|ref|ZP_07249688.1| glutamine ABC transporter, glutamine-binding protein/permease protein [Streptococcus suis 05HAS68] Length = 415 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 38/109 (34%), Positives = 65/109 (59%) Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 +S T A+++EIVR G+ AV +GQ EAA ALG TH + R ++LPQ +R+I+P ++++ Sbjct: 277 VSINTGAYMSEIVRGGIFAVDKGQFEAATALGFTHNQTMRKIVLPQVIRNILPATGNEFV 336 Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 +K++S+ + +L G T+ QT Q + + IY L+ + Sbjct: 337 INIKDTSVLNVISVVELYFSGNTVATQTYQYFQTFTVIAIIYFILTFTV 385 >gi|239834956|ref|ZP_04683284.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium LMG 3301] gi|239823019|gb|EEQ94588.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium LMG 3301] Length = 308 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 61/218 (27%), Positives = 113/218 (51%), Gaps = 24/218 (11%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF----GLPTLVLIALKYQLHF 246 +F F +GI+L++ RLS A P+L +++L G+P LV + Y L Sbjct: 81 IFGFAIGIILAVM--RLS---------ANPVLQWASWLWIWFFRGVPPLVQLIFWYNLAL 129 Query: 247 DKPVLG--------QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQME 298 P L +++ + ++P +L + LS +A+ AE +R+G+ A+ GQ E Sbjct: 130 LVPNLTIGIPFGPTLWSWDMNTLITPMSAAL-LGLSFTESAYAAETIRAGIQAINPGQTE 188 Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN 358 AA LG+T + + ++LPQA+R IIPP+ + +++LK +SL + DL+ I + Sbjct: 189 AAATLGMTRFQIMKRIVLPQAIRIIIPPIGNDTISMLKFTSLVSVLALPDLLYSAQMIYS 248 Query: 359 QTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 +T Q I ++++ YL LS + + + + + ++ Sbjct: 249 RTYQTIPLLIVATIWYLILSTALTIIEHHIENHLKSRQ 286 Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 37/106 (34%), Positives = 56/106 (52%), Gaps = 5/106 (4%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 IL G T +L F+ MI IG ++ RLSAN ++ W +++ FR +PPLV + F Sbjct: 65 ILAGLARTLFLTFAAMIFGFAIGIILAVMRLSANPVLQWASWLWIWFFRGVPPLVQLIFW 124 Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSF 194 Y L V P+ +I +PFG L + ++ TL +A + SF Sbjct: 125 YNLALLV---PNLTIGIPFGPTLWSWDMN--TLITPMSAALLGLSF 165 >gi|153836364|ref|ZP_01989031.1| amino acid ABC transporter, permease protein [Vibrio parahaemolyticus AQ3810] gi|149750266|gb|EDM61011.1| amino acid ABC transporter, permease protein [Vibrio parahaemolyticus AQ3810] Length = 306 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 49/160 (30%), Positives = 84/160 (52%), Gaps = 1/160 (0%) Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291 +P L L L + + L F F G S + S + + ++A+IAE+VR+GL + Sbjct: 142 IPLLGLEDLLRNYNGEPNALQSFLF-GPSNLWENLASGVLCVGLLSSAYIAEVVRAGLQS 200 Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 + +GQ EAA +LGL+ R V+ PQ +++I P L Q ++L+K++S+ + ++ Sbjct: 201 IDQGQWEAANSLGLSRWVKYRFVIAPQVLKAITPALAGQTISLVKDTSIVSLISIQEMTF 260 Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 VG + N +G EI LI F Y + ++L + K Sbjct: 261 VGTEMANSSGYIFEIWLIVGFSYFLICFGLSLIFRYIEKK 300 >gi|139438442|ref|ZP_01771958.1| Hypothetical protein COLAER_00948 [Collinsella aerofaciens ATCC 25986] gi|133775981|gb|EBA39801.1| Hypothetical protein COLAER_00948 [Collinsella aerofaciens ATCC 25986] Length = 277 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 45/118 (38%), Positives = 73/118 (61%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P F L + ++ A +AEI R+G+ AVPRGQ+EAA ALGL+ K T ++LPQA+R I Sbjct: 143 PSFWMLTLPVALAAAGVLAEIFRAGVNAVPRGQVEAAQALGLSKAKITFKIVLPQAIRFI 202 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 IP L SQ + ++K++++A V + DL+ +I + + L+ IY+ +++ I Sbjct: 203 IPSLISQLVVVVKDTTVAYVVSYPDLMQNARVLITNYDALVSVYLVIAVIYILINVAI 260 Score = 41.6 bits (96), Expect = 0.23, Method: Compositional matrix adjust. Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 6/78 (7%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L GF T +A + A ++G + GR S K + +CRV + FR +P L+ I+F Sbjct: 72 LLAGFEGTVKVALTAGAIALVLGLALMLGRTSDIKPLQLVCRVLTDFFRGVPSLLFIYFF 131 Query: 149 YKSVLSVLPIPDHSIVLP 166 + L +P + I LP Sbjct: 132 F------LVLPQYKIALP 143 >gi|94993627|ref|YP_601725.1| ABC transporter amino acid-binding protein / Amino acid ABC transporter permease protein [Streptococcus pyogenes MGAS10750] gi|94547135|gb|ABF37181.1| ABC transporter amino acid-binding protein / Amino acid ABC transporter permease protein [Streptococcus pyogenes MGAS10750] Length = 528 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 39/119 (32%), Positives = 68/119 (57%) Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 +S T A+++EIVR G+ AV +GQ EAA ALG TH + R ++LPQ +R+I+P ++++ Sbjct: 389 VSINTGAYMSEIVRGGIFAVDKGQFEAATALGFTHGQTMRKIVLPQVVRNILPATGNEFV 448 Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 +K++S+ + +L G T+ QT Q + I IY L+ + + + + Sbjct: 449 INIKDTSVLNVISVVELYFSGNTVATQTYQYFQTFTIIAIIYFVLTFTVTRILRHIERR 507 >gi|94989745|ref|YP_597845.1| amino acid ABC transporter permease [Streptococcus pyogenes MGAS10270] gi|94543253|gb|ABF33301.1| ABC transporter amino acid-binding protein / Amino acid ABC transporter permease protein [Streptococcus pyogenes MGAS10270] Length = 528 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 39/119 (32%), Positives = 68/119 (57%) Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 +S T A+++EIVR G+ AV +GQ EAA ALG TH + R ++LPQ +R+I+P ++++ Sbjct: 389 VSINTGAYMSEIVRGGIFAVDKGQFEAATALGFTHGQTMRKIVLPQVVRNILPATGNEFV 448 Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 +K++S+ + +L G T+ QT Q + I IY L+ + + + + Sbjct: 449 INIKDTSVLNVISVVELYFSGNTVATQTYQYFQTFTIIAIIYFVLTFTVTRILRHIERR 507 >gi|297162207|gb|ADI11919.1| putative ABC transporter permease protein [Streptomyces bingchenggensis BCW-1] Length = 493 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 42/124 (33%), Positives = 72/124 (58%), Gaps = 3/124 (2%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I L+ + AA+ AEIVR G+++V RGQ+EAA ALG+ + R ++LPQAMR+I+P S+ Sbjct: 330 IGLTLHQAAYCAEIVRGGVLSVDRGQLEAAAALGIPRLRQIRRIVLPQAMRAILPTAGSE 389 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI---WMFIYLSLSIMIALFMNR 387 ++LLK +S+ + +L I + G I ++++ W S+ + ++ R Sbjct: 390 IISLLKGTSVVYVMAIGELFYQVKVIYGRNGMVIPLLMVATAWYVFLTSVLSAVQYYVER 449 Query: 388 LNAK 391 A+ Sbjct: 450 HFAR 453 >gi|293596721|ref|ZP_06684318.1| amino acid ABC transporter [Listeria monocytogenes J2818] gi|293591776|gb|EFG00111.1| amino acid ABC transporter [Listeria monocytogenes J2818] Length = 221 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 39/124 (31%), Positives = 76/124 (61%), Gaps = 1/124 (0%) Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327 +++IA AA+ AEI R G +++ GQ E+A LGLT+ + R ++LPQ ++ ++P + Sbjct: 94 AVFIAFILNYAAYFAEIFRGGFLSIENGQYESAKVLGLTYGQTLRKIVLPQVVKRVLPAI 153 Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387 ++ +NL+K+SSL +G DL+ G +++ I ++L+ IYL+L+ ++ + + Sbjct: 154 GNEVINLVKDSSLVYILGIGDLLRAGKIAMSRDVTLIPLVLVAA-IYLALTAILTVLFKQ 212 Query: 388 LNAK 391 L + Sbjct: 213 LEKR 216 >gi|261250641|ref|ZP_05943216.1| amino acid ABC transporter permease protein [Vibrio orientalis CIP 102891] gi|260939210|gb|EEX95197.1| amino acid ABC transporter permease protein [Vibrio orientalis CIP 102891] Length = 223 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 56/170 (32%), Positives = 96/170 (56%), Gaps = 15/170 (8%) Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALK 241 TM+ FS +L ++L+ R F L LYIS F G P LV + L Sbjct: 22 TMEMATWGLFFSLILSVILANI-----RVFRIPVLDQLSQLYISFFR--GTPLLVQLFL- 73 Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301 L++ P + F F+ G F + I L+ + AA++AE +R+ +I + R QMEA++ Sbjct: 74 --LYYGLPQI--FPFLVGLDA---FGAAVIGLTLHFAAYMAESIRAAIIGIDRSQMEASL 126 Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 ++G+T +A R V+LPQA R +P L + +++++K++SLA +G A++++ Sbjct: 127 SVGMTTPQAMRRVILPQATRVALPSLMNYFIDMIKSTSLAFTLGVAEIMA 176 >gi|255026867|ref|ZP_05298853.1| hypothetical protein LmonocytFSL_12011 [Listeria monocytogenes FSL J2-003] Length = 213 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 39/124 (31%), Positives = 76/124 (61%), Gaps = 1/124 (0%) Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327 +++IA AA+ AEI R G +++ GQ E+A LGLT+ + R ++LPQ ++ ++P + Sbjct: 86 AVFIAFILNYAAYFAEIFRGGFLSIENGQYESAKVLGLTYGQTLRKIVLPQVVKRVLPAI 145 Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387 ++ +NL+K+SSL +G DL+ G +++ I ++L+ IYL+L+ ++ + + Sbjct: 146 GNEVINLVKDSSLVYILGIGDLLRAGKIAMSRDVTLIPLVLVAA-IYLALTAILTVLFKQ 204 Query: 388 LNAK 391 L + Sbjct: 205 LEKR 208 >gi|110807126|ref|YP_690646.1| putative transport system permease [Shigella flexneri 5 str. 8401] gi|110616674|gb|ABF05341.1| putative transport system permease protein [Shigella flexneri 5 str. 8401] Length = 367 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 37/96 (38%), Positives = 62/96 (64%) Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315 F+ T + + + + + +A++AE+VR GL A+P+GQ EAA +L L++RK LV+ Sbjct: 221 FMAEGTSIDKLIRALVGVILFQSAYVAEVVRGGLQALPKGQYEAAESLALSYRKTQGLVI 280 Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 LPQA++ +IP L + + L K++SL + +G DL S Sbjct: 281 LPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFS 316 >gi|17546824|ref|NP_520226.1| amino-acid transmembrane ABC transporter protein [Ralstonia solanacearum GMI1000] gi|17429124|emb|CAD15812.1| probable amino-acid transmembrane abc transporter protein [Ralstonia solanacearum GMI1000] Length = 217 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 50/155 (32%), Positives = 84/155 (54%), Gaps = 5/155 (3%) Query: 243 QLHFDKPVLGQ--FNFIGGSTVSPE---FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQM 297 Q+ + P+L Q F G S E + + I L+ YT+A++AE+ R + A+PRGQ Sbjct: 59 QIFQNTPLLMQMFLVFFGASMAGLEMSPWTAAAIGLTLYTSAYLAEVWRGCVEAIPRGQW 118 Query: 298 EAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII 357 EA+ +L + + + R V+LPQA+R I P + ++K +++A +GF DL +G + Sbjct: 119 EASASLAMGYFQQMRHVVLPQAVRMSIAPTVGFSVQIVKGTAVASIIGFEDLTKLGSVLA 178 Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 N T Q I + YL+L ++L + L K+ Sbjct: 179 NATFQPFLIYGLVGMAYLALCWPLSLCASHLEKKL 213 >gi|330887727|gb|EGH20388.1| amino acid ABC transporter permease [Pseudomonas syringae pv. mori str. 301020] Length = 365 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 33/81 (40%), Positives = 59/81 (72%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I + + +A+IAE+VR G+ A+P+GQ EAA A+GL + ++ LV+LPQA++ +IP + + Sbjct: 235 IGVILFQSAYIAEVVRGGMQAIPKGQYEAASAMGLGYWRSMGLVILPQALKMVIPGIVNT 294 Query: 331 YLNLLKNSSLAVAVGFADLVS 351 ++ L K++SL + +G DL++ Sbjct: 295 FIALFKDTSLVIIIGLFDLLN 315 >gi|306828018|ref|ZP_07461284.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus pyogenes ATCC 10782] gi|304429799|gb|EFM32842.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus pyogenes ATCC 10782] Length = 522 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 39/119 (32%), Positives = 68/119 (57%) Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 +S T A+++EIVR G+ AV +GQ EAA ALG TH + R ++LPQ +R+I+P ++++ Sbjct: 383 VSINTGAYMSEIVRGGIFAVDKGQFEAATALGFTHGQTMRKIVLPQVVRNILPATGNEFV 442 Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 +K++S+ + +L G T+ QT Q + I IY L+ + + + + Sbjct: 443 INIKDTSVLNVISVVELYFSGNTVATQTYQYFQTFTIIAIIYFVLTFTVTRILRHIERR 501 >gi|83718147|ref|YP_440543.1| glutamine ABC transporter permease [Burkholderia thailandensis E264] gi|83651972|gb|ABC36036.1| glutamine ABC transporter, permease protein [Burkholderia thailandensis E264] Length = 230 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 59/208 (28%), Positives = 102/208 (49%), Gaps = 23/208 (11%) Query: 177 SFPTLTMDTNAKIFVF------SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230 + P LT +F+ F++G++ +F R + L +YI LI Sbjct: 23 ALPDLTDGVRLTVFIAFFGLAGGFLVGMIAGMF-----RAYGPAALNVLTQVYIE--LIR 75 Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290 G P +V + L+F P+L G + +A++ + A++AE+VR L+ Sbjct: 76 GTPIVVQVMF---LYFALPMLAHIRIDG-------LTAAIVAITLNSGAYLAEVVRGALL 125 Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 ++P+G EA +A+GL+ + ++ P A R +I PL +Q + LK++SL + +G +L Sbjct: 126 SIPKGVTEAGLAMGLSMPRVLVKIVGPLAFRRLIAPLGNQCIVSLKDTSLFIVIGVGELT 185 Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLS 378 G II QA+EI IYL+L+ Sbjct: 186 RKGQEIIAGNFQAVEIWTAVAAIYLALT 213 >gi|21910156|ref|NP_664424.1| putative ABC transporter (permease) [Streptococcus pyogenes MGAS315] gi|28896145|ref|NP_802495.1| ABC transporter (permease) [Streptococcus pyogenes SSI-1] gi|71903352|ref|YP_280155.1| cystine transport system permease protein [Streptococcus pyogenes MGAS6180] gi|21904349|gb|AAM79227.1| putative ABC transporter (permease) [Streptococcus pyogenes MGAS315] gi|28811395|dbj|BAC64328.1| putative ABC transporter (permease) [Streptococcus pyogenes SSI-1] gi|71802447|gb|AAX71800.1| cystine transport system permease protein [Streptococcus pyogenes MGAS6180] Length = 216 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 41/131 (31%), Positives = 74/131 (56%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P + Y+ S +AA+I+E+ RS + A+ +GQ EAA ALGL + + ++LPQA R Sbjct: 85 PALLCAYLGFSMVSAAYISEVFRSSIEAIDKGQWEAAKALGLPYALMVKKIILPQAFRIA 144 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 +PPL + ++++K+SSLA + D+ I + + + ++ FIY ++ ++ Sbjct: 145 VPPLGNVIIDMVKSSSLAAMITVPDIFQNAKIIGGREWDYMSMYILVAFIYWIIAFLLER 204 Query: 384 FMNRLNAKIAL 394 + L K+AL Sbjct: 205 YQEFLENKLAL 215 >gi|320329011|gb|EFW85010.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. glycinea str. race 4] gi|330880665|gb|EGH14814.1| amino acid ABC transporter permease [Pseudomonas syringae pv. glycinea str. race 4] Length = 220 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 47/164 (28%), Positives = 88/164 (53%), Gaps = 11/164 (6%) Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292 P LVLI L Y F P LG + S + LS Y A++ E+ R+GL+++ Sbjct: 68 PILVLILLIY---FALPGLG--------IRLDKLASFIVTLSLYAGAYLTEVFRAGLLSI 116 Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352 GQ EA +A+GL + +++P +R+++P L++ +++L K++SLA A+ +L Sbjct: 117 HEGQREAGLAIGLGEWQVRAYIIVPVMLRNVLPALSNNFISLFKDTSLAAAIAVPELTYY 176 Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 I ++ + IE L+ +Y+ +IA+ + L ++A++ Sbjct: 177 ARKINVESYRVIETWLVTTALYVVACYVIAMLLRTLEQRLAIRR 220 >gi|289647198|ref|ZP_06478541.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. aesculi str. 2250] Length = 365 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 33/81 (40%), Positives = 59/81 (72%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I + + +A+IAE+VR G+ A+P+GQ EAA A+GL + ++ LV+LPQA++ +IP + + Sbjct: 235 IGVILFQSAYIAEVVRGGMQAIPKGQYEAASAMGLGYWRSMGLVILPQALKMVIPGIVNT 294 Query: 331 YLNLLKNSSLAVAVGFADLVS 351 ++ L K++SL + +G DL++ Sbjct: 295 FIALFKDTSLVIIIGLFDLLN 315 >gi|94987869|ref|YP_595970.1| ABC transporter amino acid-binding protein [Streptococcus pyogenes MGAS9429] gi|94541377|gb|ABF31426.1| ABC transporter amino acid-binding protein [Streptococcus pyogenes MGAS9429] Length = 528 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 39/119 (32%), Positives = 68/119 (57%) Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 +S T A+++EIVR G+ AV +GQ EAA ALG TH + R ++LPQ +R+I+P ++++ Sbjct: 389 VSINTGAYMSEIVRGGIFAVDKGQFEAATALGFTHGQTMRKIVLPQVVRNILPATGNEFV 448 Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 +K++S+ + +L G T+ QT Q + I IY L+ + + + + Sbjct: 449 INIKDTSVLNVISVVELYFSGNTVATQTYQYFQTFTIIAIIYFVLTFTVTRILRHIERR 507 >gi|9929260|emb|CAC05299.1| putative transmembrane protein [Lactobacillus reuteri] Length = 233 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 51/201 (25%), Positives = 106/201 (52%), Gaps = 6/201 (2%) Query: 191 VFSFVLGIVLSLFAT--RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248 + SF+ G++++L RLSR + G + L +I++F ++ + L+ + + F Sbjct: 25 IISFLFGLIIALVTALIRLSR----QRGAFMILKWIASFYVWLFRSTPLLVQLFIVFFGL 80 Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308 P L + F + I S T A+ +E +R+ + +VP GQ EA A+G+T Sbjct: 81 PYLRIKGVLPHGIKLEPFTAGIITFSLNTGAYASETIRAAISSVPTGQWEAGAAIGMTRL 140 Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368 + ++LPQA+R +PPL++ +++L+K++SLA ++ ++ +V I + Q + + Sbjct: 141 QILWRIILPQALRVALPPLSNSFISLVKDTSLAASITIMEMFAVSQQIAAENYQPLLMYT 200 Query: 369 IWMFIYLSLSIMIALFMNRLN 389 + +Y + + +++ F L Sbjct: 201 LVAMVYAAFTTILSYFQGYLE 221 >gi|68249636|ref|YP_248748.1| amino-acid ABC transporter permease protein [Haemophilus influenzae 86-028NP] gi|319897441|ref|YP_004135638.1| amino-acid abc transporter permease protein [Haemophilus influenzae F3031] gi|68057835|gb|AAX88088.1| probable amino-acid ABC transporter permease protein [Haemophilus influenzae 86-028NP] gi|317432947|emb|CBY81314.1| probable amino-acid ABC transporter permease protein [Haemophilus influenzae F3031] Length = 225 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 62/207 (29%), Positives = 110/207 (53%), Gaps = 19/207 (9%) Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249 F ++ +++++ T S + K +AL +YIS +I G P LV I + + + P Sbjct: 32 FFCGLLIAVIVAVIRTLPSPNLPLKLLQALCRVYIS--IIRGTPMLVQI---FIIFYGLP 86 Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309 +G T+ P F + IA S A+ AE VR+ +IA+P+GQ EA+ A+G+ +R+ Sbjct: 87 EVG-------ITLEP-FPTAIIAFSINIGAYAAETVRASIIAIPKGQWEASYAIGMNYRQ 138 Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369 A ++PQA+R +P L++ +++ +K++SLA V +L V N T E ILI Sbjct: 139 AFIRTIMPQALRISVPSLSNTFISTVKDTSLASLVLVTELFRVAQ---NITAANYEFILI 195 Query: 370 W---MFIYLSLSIMIALFMNRLNAKIA 393 + IY +++ +RL +++ Sbjct: 196 YSEAALIYWIFCFVLSFLQDRLEIRLS 222 >gi|116627490|ref|YP_820109.1| ABC-type amino acid transport system, permease component [Streptococcus thermophilus LMD-9] gi|116100767|gb|ABJ65913.1| ABC-type amino acid transport system, permease component [Streptococcus thermophilus LMD-9] Length = 235 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 53/161 (32%), Positives = 93/161 (57%), Gaps = 15/161 (9%) Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL-HFDKPV 250 F +LG+++SL ++ K + L LY+ F G P +V I + + L H + P Sbjct: 39 FGTILGVLVSL-----AKRSGIKPLEWLVSLYVWVFR--GTPMVVQIMIAFNLIHMNLPT 91 Query: 251 LGQFNFIGG--STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308 + QF + S + P I LS + A+I+E VR+G+ ++P+GQ+EAA +LG+ Sbjct: 92 V-QFGILNLDLSRIVPGI----IVLSLNSGAYISESVRAGIESIPKGQIEAAYSLGIRPW 146 Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349 R V+LPQA+++I+P L ++++ ++K+SSL +G +L Sbjct: 147 NTMRYVVLPQAIKNILPALGNEFVTIIKDSSLLQTIGVMEL 187 >gi|296535456|ref|ZP_06897646.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Roseomonas cervicalis ATCC 49957] gi|296264215|gb|EFH10650.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Roseomonas cervicalis ATCC 49957] Length = 229 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 43/105 (40%), Positives = 65/105 (61%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + LS AA+++E VR+G+ AVP+GQ EAA+ALGL +A RLV+ PQA+R IIPPL + Sbjct: 96 LGLSLNEAAYLSETVRAGIQAVPKGQREAALALGLRGVQAFRLVIWPQALRIIIPPLGNS 155 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375 LLK +S+A + +L+ +I + +E+ + YL Sbjct: 156 VNGLLKTTSVASVISMDELLRRTQILIQERFLVLELFAVAALYYL 200 >gi|251780837|ref|ZP_04823757.1| L-cystine transport system permease protein TcyB [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243085152|gb|EES51042.1| L-cystine transport system permease protein TcyB [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 213 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 56/194 (28%), Positives = 93/194 (47%), Gaps = 30/194 (15%) Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPT 234 +T++ + S LGIV++L T + TG + PLL + FGLPT Sbjct: 17 VTLEVFVLTLILSIPLGIVVALARTSKFLVLRKLTGIYVLIMRGTPLLLQIVVIFFGLPT 76 Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294 + + FD+ F + +A AA+ EI RSG+I++ + Sbjct: 77 M-------GITFDR-----------------FTAAILAFVLNYAAYFGEIFRSGIISIDK 112 Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354 GQ EAA LGLT + ++LPQA++ +IPP+ ++ L+K++SL +G +L+ + Sbjct: 113 GQYEAAEMLGLTSKDTFFRIILPQAIKRVIPPVANEITTLIKDTSLVYIIGLDELLKIAK 172 Query: 355 TIINQTGQAIEIIL 368 N+ I +IL Sbjct: 173 IASNRDVTLIPLIL 186 >gi|146320335|ref|YP_001200046.1| ABC-type amino acid transport system, permease component [Streptococcus suis 98HAH33] gi|145691141|gb|ABP91646.1| ABC-type amino acid transport system, permease component [Streptococcus suis 98HAH33] Length = 194 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 32/79 (40%), Positives = 60/79 (75%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I +S + A+++E VR+G+ AVP+GQ+EAA +LG+ ++A R V++PQA+++I+P L ++ Sbjct: 65 IVISMNSGAYVSETVRAGINAVPKGQLEAAYSLGIRPKQAMRYVIMPQAIKNILPALGNE 124 Query: 331 YLNLLKNSSLAVAVGFADL 349 ++ ++K+SSL +G +L Sbjct: 125 FVTIVKDSSLLSTIGVMEL 143 >gi|312959112|ref|ZP_07773631.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Pseudomonas fluorescens WH6] gi|311286882|gb|EFQ65444.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Pseudomonas fluorescens WH6] Length = 365 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 33/81 (40%), Positives = 59/81 (72%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I + + +A++AE+VR GL A+P+GQ EAA A+GL + ++ LV+LPQA++ +IP + + Sbjct: 235 IGVILFQSAYVAEVVRGGLQAIPKGQYEAAAAMGLGYWRSMGLVILPQALKLVIPGIVNT 294 Query: 331 YLNLLKNSSLAVAVGFADLVS 351 ++ L K++SL + +G DL++ Sbjct: 295 FIALFKDTSLVIIIGLFDLLN 315 >gi|257487408|ref|ZP_05641449.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tabaci ATCC 11528] gi|289628607|ref|ZP_06461561.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|330867830|gb|EGH02539.1| amino acid ABC transporter permease [Pseudomonas syringae pv. aesculi str. 0893_23] gi|331009000|gb|EGH89056.1| amino acid ABC transporter permease [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 365 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 33/81 (40%), Positives = 59/81 (72%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I + + +A+IAE+VR G+ A+P+GQ EAA A+GL + ++ LV+LPQA++ +IP + + Sbjct: 235 IGVILFQSAYIAEVVRGGMQAIPKGQYEAASAMGLGYWRSMGLVILPQALKMVIPGIVNT 294 Query: 331 YLNLLKNSSLAVAVGFADLVS 351 ++ L K++SL + +G DL++ Sbjct: 295 FIALFKDTSLVIIIGLFDLLN 315 >gi|253576767|ref|ZP_04854093.1| polar amino acid ABC transporter [Paenibacillus sp. oral taxon 786 str. D14] gi|251843798|gb|EES71820.1| polar amino acid ABC transporter [Paenibacillus sp. oral taxon 786 str. D14] Length = 219 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 46/152 (30%), Positives = 81/152 (53%), Gaps = 19/152 (12%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 + PLL F+ FGLP + PV+G++ V F++ +A + Sbjct: 61 RGTPLLLQMLFVCFGLPVI-------------PVIGEY------LVMDRFVAACVAFTLN 101 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 AA+ AEI R GL+A+ +GQ EAA LGL+ + T ++LPQ +R +P ++++ + L+K Sbjct: 102 YAAYFAEIFRGGLLAIDKGQYEAAKVLGLSRWQTTTRIVLPQMLRIALPAVSNESITLVK 161 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368 +++L AV +L+ T +N+ + +L Sbjct: 162 DTALLYAVAVPELLHFAQTAVNRDFTIVPFVL 193 >gi|240117510|ref|ZP_04731572.1| Amino acid permease integral membrane protein [Neisseria gonorrhoeae PID1] gi|268603209|ref|ZP_06137376.1| amino acid permease integral membrane protein [Neisseria gonorrhoeae PID1] gi|268587340|gb|EEZ52016.1| amino acid permease integral membrane protein [Neisseria gonorrhoeae PID1] Length = 238 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 36/121 (29%), Positives = 67/121 (55%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I S A+ +E +R+ +++VP+GQ EA ++G+T+ + R ++ PQA R +PPL+++ Sbjct: 111 IGFSLNVGAYASETIRAAILSVPKGQWEAGFSIGMTYMQTFRRIVAPQAFRVAVPPLSNE 170 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++ L KN+SLA V +L V N+T + + + +Y ++ L RL Sbjct: 171 FIGLFKNTSLAAVVTVTELFRVAQETANRTYDFLPVYIEVALVYWCFCKVLFLIQARLEK 230 Query: 391 K 391 + Sbjct: 231 R 231 >gi|298485802|ref|ZP_07003881.1| ABC-type amino acid transport system, permease component yhdY [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298159828|gb|EFI00870.1| ABC-type amino acid transport system, permease component yhdY [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 365 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 33/81 (40%), Positives = 59/81 (72%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I + + +A+IAE+VR G+ A+P+GQ EAA A+GL + ++ LV+LPQA++ +IP + + Sbjct: 235 IGVILFQSAYIAEVVRGGMQAIPKGQYEAASAMGLGYWRSMGLVILPQALKMVIPGIVNT 294 Query: 331 YLNLLKNSSLAVAVGFADLVS 351 ++ L K++SL + +G DL++ Sbjct: 295 FIALFKDTSLVIIIGLFDLLN 315 >gi|118473089|ref|YP_889613.1| ectoine/hydroxyectoine ABC transporter permease protein EhuD [Mycobacterium smegmatis str. MC2 155] gi|118174376|gb|ABK75272.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD [Mycobacterium smegmatis str. MC2 155] Length = 222 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 46/151 (30%), Positives = 81/151 (53%), Gaps = 10/151 (6%) Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIA-LSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302 ++F PV+G + P + IA L + A +++E+ R+G+ A+P+GQ EA A Sbjct: 80 VYFGLPVVG---------IRPSALVTGIAVLGVHYACYMSEVYRAGIDAIPQGQWEACTA 130 Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362 L L+ + R V+LPQ +R I+P +Q + L K + + +G ++V+V Q + Sbjct: 131 LSLSPYRTWRAVVLPQVVRRILPSTGNQVIALFKETPFLIVIGVLEMVTVANQFGGQNYR 190 Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393 IE I I I+L+ S ++ M +L ++A Sbjct: 191 YIEPITIAGLIFLAASYPTSVLMRKLEIRVA 221 >gi|71902896|ref|YP_279699.1| ABC transporter amino acid-binding protein [Streptococcus pyogenes MGAS6180] gi|71801991|gb|AAX71344.1| ABC transporter amino acid-binding protein [Streptococcus pyogenes MGAS6180] Length = 528 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 39/119 (32%), Positives = 68/119 (57%) Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 +S T A+++EIVR G+ AV +GQ EAA ALG TH + R ++LPQ +R+I+P ++++ Sbjct: 389 VSINTGAYMSEIVRGGIFAVDKGQFEAATALGFTHGQTMRKIVLPQVVRNILPATGNEFV 448 Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 +K++S+ + +L G T+ QT Q + I IY L+ + + + + Sbjct: 449 INIKDTSVLNVISVVELYFSGNTVATQTYQYFQTFTIIAIIYFVLTFTVTRILRHIERR 507 >gi|228475903|ref|ZP_04060613.1| amino acid ABC transporter, permease/substrate-binding protein [Staphylococcus hominis SK119] gi|228270058|gb|EEK11528.1| amino acid ABC transporter, permease/substrate-binding protein [Staphylococcus hominis SK119] Length = 484 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 34/80 (42%), Positives = 57/80 (71%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IAL ++A+IAEI R+G+ AV +GQ EAA LGL + K R ++LPQA+++I+P L ++ Sbjct: 359 IALVINSSAYIAEIFRAGINAVDKGQTEAAQCLGLNYSKTMRYIILPQAIKNILPALGNE 418 Query: 331 YLNLLKNSSLAVAVGFADLV 350 ++ L+K SS+ +G +++ Sbjct: 419 FVTLIKESSIVSTIGVGEIM 438 Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust. Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 4/89 (4%) Query: 72 IDQGIVPYTSDSS----YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAW 127 +D+ DSS Y + G NT ++ G++ ++G L+ +LS KL++W Sbjct: 259 MDKASKDMQDDSSFFDKYGAFFIKGLKNTILISMIGVVLGAVLGALIALAKLSKFKLLSW 318 Query: 128 ICRVYVEVFRNIPPLVVIFFLYKSVLSVL 156 I +Y+E R P LV +F ++ +VL Sbjct: 319 IASIYIEFLRGTPMLVQVFLVFFGTTAVL 347 >gi|254382234|ref|ZP_04997595.1| glutamate transporter permease [Streptomyces sp. Mg1] gi|194341140|gb|EDX22106.1| glutamate transporter permease [Streptomyces sp. Mg1] Length = 292 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 65/214 (30%), Positives = 104/214 (48%), Gaps = 42/214 (19%) Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI---FGLPTLVLI 238 T+ A VFS +LG VL+ A RLS H PL +I+T + +P LV+I Sbjct: 79 TLKAFAYASVFSLLLGAVLA--AGRLSVH--------RPLRWIATLCVEFFRAMPVLVMI 128 Query: 239 -----ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293 ALK Q +L L+ Y + +AE+ R+G+ AV Sbjct: 129 FFIFVALKVQ---------------------PLPALVAGLTLYNGSVLAEVFRTGINAVD 167 Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353 RGQ EAA ALG+ + T VL PQA+R+++P + SQ + LK++SL + + + + G Sbjct: 168 RGQREAAYALGMRKTQVTTYVLAPQALRAMLPTIISQLVVALKDTSLGYLITYEEFLHAG 227 Query: 354 GTIINQTGQA---IEIILIWMFIYLSLSIMIALF 384 I + I +++I IY+ + ++++ F Sbjct: 228 KLIASNLDYDLPFIPVVMIISPIYIGMCMLLSWF 261 Score = 45.4 bits (106), Expect = 0.014, Method: Compositional matrix adjust. Identities = 22/51 (43%), Positives = 36/51 (70%), Gaps = 1/51 (1%) Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIP 159 ++G ++ AGRLS ++ + WI + VE FR +P LV+IFF++ + L V P+P Sbjct: 92 LLGAVLAAGRLSVHRPLRWIATLCVEFFRAMPVLVMIFFIFVA-LKVQPLP 141 >gi|16760898|ref|NP_456515.1| ABC transporter membrane protein [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|16765290|ref|NP_460905.1| ABC-type amino acid transporter permease component [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|29141410|ref|NP_804752.1| ABC transporter membrane protein [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|62180526|ref|YP_216943.1| putative ABC-type amino acid transporter, permease component [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|167552820|ref|ZP_02346571.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|167993521|ref|ZP_02574615.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|168239188|ref|ZP_02664246.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|168822992|ref|ZP_02834992.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|194735316|ref|YP_002114985.1| amino acid ABC transporter His/Glu/Gln/Arg/opine family, permease [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197248583|ref|YP_002146071.1| amino acid ABC transporter His/Glu/Gln/Arg/opine family, permease [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|204930985|ref|ZP_03221811.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|213053511|ref|ZP_03346389.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213417112|ref|ZP_03350256.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] gi|213426354|ref|ZP_03359104.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213855799|ref|ZP_03384039.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Salmonella enterica subsp. enterica serovar Typhi str. M223] gi|224583547|ref|YP_002637345.1| ABC-type amino acid transporter, permease component [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|238912475|ref|ZP_04656312.1| putative ABC-type amino acid transporter, permease component [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|289824074|ref|ZP_06543672.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|25296622|pir||AB0750 probable ABC transporter membrane protein STY2160 [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16420486|gb|AAL20864.1| putative ABC-type amino acid transporter [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|16503195|emb|CAD05701.1| putative ABC transporter membrane protein [Salmonella enterica subsp. enterica serovar Typhi] gi|29137037|gb|AAO68601.1| putative ABC transporter membrane protein [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|62128159|gb|AAX65862.1| putative ABC-type amino acid transporter, permease component [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|194710818|gb|ACF90039.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197212286|gb|ACH49683.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197288074|gb|EDY27461.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|204320029|gb|EDZ05234.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205322601|gb|EDZ10440.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205328383|gb|EDZ15147.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205340660|gb|EDZ27424.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|224468074|gb|ACN45904.1| putative ABC-type amino acid transporter, permease component [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|261247118|emb|CBG24941.1| putative ABC transporter membrane protein [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267993938|gb|ACY88823.1| putative ABC-type amino acid transporter permease component [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301158466|emb|CBW17976.1| putative ABC transporter membrane protein [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312912942|dbj|BAJ36916.1| amine ABC transporter permease protein [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|320085430|emb|CBY95211.1| probable amino-acid ABC transporter permease protein yckA [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|321224595|gb|EFX49658.1| Cystine ABC transporter, permease protein [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|322616945|gb|EFY13853.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322618185|gb|EFY15077.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322625855|gb|EFY22674.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322626307|gb|EFY23117.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322632722|gb|EFY29467.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322639064|gb|EFY35757.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322640505|gb|EFY37158.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322645986|gb|EFY42503.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322649893|gb|EFY46314.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322655501|gb|EFY51809.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322660279|gb|EFY56517.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322662960|gb|EFY59167.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322668145|gb|EFY64304.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322674095|gb|EFY70189.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322675552|gb|EFY71626.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322683036|gb|EFY79052.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322686730|gb|EFY82708.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|322715002|gb|EFZ06573.1| putative ABC transporter membrane protein [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] gi|323130230|gb|ADX17660.1| putative ABC transporter membrane protein [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|323195381|gb|EFZ80561.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323199272|gb|EFZ84367.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323204437|gb|EFZ89443.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323207527|gb|EFZ92475.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323211852|gb|EFZ96683.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323217512|gb|EGA02231.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323223590|gb|EGA07905.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323231534|gb|EGA15647.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323235977|gb|EGA20056.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323240547|gb|EGA24590.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323245439|gb|EGA29439.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323250209|gb|EGA34101.1| amino acid ABC transporter permease [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323253980|gb|EGA37804.1| amino acid ABC transporter permease [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323255493|gb|EGA39254.1| amino acid ABC transporter permease [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323262090|gb|EGA45653.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323266213|gb|EGA49703.1| amino acid ABC transporter permease [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323270678|gb|EGA54119.1| amino acid ABC transporter permease [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] Length = 222 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 61/207 (29%), Positives = 109/207 (52%), Gaps = 18/207 (8%) Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251 F +LG VL+L R+S + + L YIS F G P LIA + +++ P Sbjct: 32 FGLLLGFVLALM--RMSPLWPVRW---LARFYISIFR--GTP---LIAQLFMIYYGLP-- 79 Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311 QF G + P + I LS TAA+ +E +R+ + A+ +GQ EAA ++G+T + Sbjct: 80 -QF----GIELDP-IPAAMIGLSLNTAAYTSETLRAAISAIDKGQWEAAASIGMTPWQTL 133 Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371 R +LPQA R +PPL++ +++L+K++SLA + +L I ++T + + L Sbjct: 134 RRAILPQAARVALPPLSNSFISLVKDTSLAATIQVPELFRQAQLITSRTLEVFTMYLAAS 193 Query: 372 FIYLSLSIMIALFMNRLNAKIALKEKK 398 IY ++ +++ N ++ +E++ Sbjct: 194 LIYWVMATVLSALQNYFENQLNRQERE 220 Score = 37.7 bits (86), Expect = 3.5, Method: Compositional matrix adjust. Identities = 29/103 (28%), Positives = 48/103 (46%), Gaps = 8/103 (7%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G V T L+ GM ++G ++ R+S V W+ R Y+ +FR P + +F + Sbjct: 15 LLKGAVFTLQLSIGGMFFGLLLGFVLALMRMSPLWPVRWLARFYISIFRGTPLIAQLFMI 74 Query: 149 YKSV----LSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187 Y + + + PIP I G+ LN + TL +A Sbjct: 75 YYGLPQFGIELDPIPAAMI----GLSLNTAAYTSETLRAAISA 113 >gi|319943563|ref|ZP_08017845.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lautropia mirabilis ATCC 51599] gi|319743378|gb|EFV95783.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lautropia mirabilis ATCC 51599] Length = 217 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 33/102 (32%), Positives = 63/102 (61%) Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317 GG P+F + +A + AA+ AEI R+G+ ++ RGQ E A LG+ + + R +++P Sbjct: 79 GGGIQLPDFPAAVVAFALNYAAYFAEIFRAGIQSIDRGQYEGAKVLGMNYPQTMRRIVMP 138 Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359 Q +R ++PPL+++++ L+K++SL + DL+ I+ + Sbjct: 139 QVIRRVLPPLSNEFITLVKDTSLIYVLALNDLLRAARGIVQR 180 >gi|307306766|ref|ZP_07586507.1| polar amino acid ABC transporter, inner membrane subunit [Sinorhizobium meliloti BL225C] gi|306902057|gb|EFN32655.1| polar amino acid ABC transporter, inner membrane subunit [Sinorhizobium meliloti BL225C] Length = 220 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 39/122 (31%), Positives = 73/122 (59%) Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 L+ Y+ A++AE+ R GLIA+P GQ EA +A+GLT + +++P +RS++P L S + Sbjct: 97 LAIYSGAYLAEVFRGGLIAIPPGQREAGLAIGLTEMQIRTSIIIPLMLRSVLPSLGSTMI 156 Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 +L K++SLA A+ +L I +T + +E ++ +Y++ ++A M ++ Sbjct: 157 SLFKDTSLAAAIAVPELTFEARKINVETFRVVETWIVASCLYVATCSLLAALMRAAERRL 216 Query: 393 AL 394 A+ Sbjct: 217 AV 218 >gi|170739979|ref|YP_001768634.1| polar amino acid ABC transporter inner membrane subunit [Methylobacterium sp. 4-46] gi|168194253|gb|ACA16200.1| polar amino acid ABC transporter, inner membrane subunit [Methylobacterium sp. 4-46] Length = 219 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 64/206 (31%), Positives = 105/206 (50%), Gaps = 14/206 (6%) Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252 +F+LG L+ F L R + + L Y+ +I GLP L+L+ + ++F V+G Sbjct: 26 AFLLG-SLAGFGVMLLRIARARWVRRLAFAYVQ--VIQGLPLLILL---FCVYFGLGVIG 79 Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312 +SP ++ I+L Y +AF+ EI R + AVPR Q EAA L L+ +A Sbjct: 80 -------VELSP-LVAAAISLMVYCSAFLGEIWRGCVEAVPRTQGEAAECLALSRWQALV 131 Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372 V+LPQA R +PP ++ +LK++SLA VGF +L I N Q + + Sbjct: 132 DVILPQAARIAVPPTVGFFVQVLKSTSLASVVGFVELTRASQLINNSIFQPFLVFGLAGA 191 Query: 373 IYLSLSIMIALFMNRLNAKIALKEKK 398 +Y +L ++ + RL K+ + ++ Sbjct: 192 LYFALCYPLSRWSRRLERKLHVGRRQ 217 >gi|330833503|ref|YP_004402328.1| amino acid ABC transporter amino acid-binding protein/permease [Streptococcus suis ST3] gi|329307726|gb|AEB82142.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus suis ST3] Length = 521 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 38/109 (34%), Positives = 65/109 (59%) Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 +S T A+++EIVR G+ AV +GQ EAA ALG TH + R ++LPQ +R+I+P ++++ Sbjct: 383 VSINTGAYMSEIVRGGIFAVDKGQFEAATALGFTHNQTMRKIVLPQVIRNILPATGNEFV 442 Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 +K++S+ + +L G T+ QT Q + + IY L+ + Sbjct: 443 INIKDTSVLNVISVVELYFSGNTVATQTYQYFQTFTVIAIIYFILTFTV 491 >gi|297627339|ref|YP_003689102.1| polar amino acid ABC transporter, inner membrane protein [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] gi|296923104|emb|CBL57691.1| polar amino acid ABC transporter, inner membrane protein [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] Length = 212 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 43/120 (35%), Positives = 69/120 (57%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I L TA ++AEI R G++AV +GQ EAA ALGL + V+ PQAMR++ P LT+ Sbjct: 85 IGLGIITAGYLAEIFRGGMLAVRKGQFEAANALGLGGWTSFTRVVAPQAMRAMQPGLTTY 144 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 + L+K+SS+A +G ++V + + + + + IYL +S+ + L R+ A Sbjct: 145 SIGLIKDSSIASVIGVTEMVYTANSYAKISKEGVLLFFEAALIYLVISVPLGLLARRIEA 204 >gi|224371698|ref|YP_002605862.1| ABC-type branched-chain amino acid transport-system, permease component [Desulfobacterium autotrophicum HRM2] gi|223694415|gb|ACN17698.1| ABC-type branched-chain amino acid transport-system, permease component [Desulfobacterium autotrophicum HRM2] Length = 384 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 36/87 (41%), Positives = 58/87 (66%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 + + I + ++AA+IAE+VR GL A+P+GQ+EAA +LGL T V+LPQA+R ++P Sbjct: 253 LLRVQIGIILFSAAYIAEVVRGGLQAIPQGQIEAATSLGLPGWVVTAFVVLPQALRHVVP 312 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSV 352 L + + L K++SL + VG D + + Sbjct: 313 SLIGRCVALFKDTSLVIIVGLLDFLGM 339 >gi|170780723|ref|YP_001709055.1| putative integral membrane transport protein [Clavibacter michiganensis subsp. sepedonicus] gi|169155291|emb|CAQ00394.1| putative integral membrane transport protein [Clavibacter michiganensis subsp. sepedonicus] Length = 221 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 63/224 (28%), Positives = 112/224 (50%), Gaps = 21/224 (9%) Query: 177 SFPTLTMDT---NAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233 SF L ++T + + +F LG+ ++L L R + + + YIS ++ G P Sbjct: 11 SFGPLALETIRGTIPLALVTFALGLAIAL-GLALMRLYGNRLVSGIARFYIS--VVRGTP 67 Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293 LV + + + + P +G V P + S IALS + AEI+R+ +++VP Sbjct: 68 LLVQL---FVIFYGLPSIG--------VVLPPWPSAVIALSLNVGGYAAEIIRASILSVP 116 Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353 RGQ EA +G++ R +++PQA R +PPL++ +++L+K++SLA + +L Sbjct: 117 RGQWEAGHTIGMSRALTLRRIIVPQAARVSVPPLSNTFISLVKDTSLASVILVTELFKQA 176 Query: 354 GTIINQTGQ----AIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393 I + T + +E LI+ + L LS RL+ +A Sbjct: 177 QLIASSTFEYMLLYLEAALIYWLVCLVLSFAQTRLERRLDRYVA 220 >gi|139473935|ref|YP_001128651.1| transport system membrane protein [Streptococcus pyogenes str. Manfredo] gi|134272182|emb|CAM30427.1| transport system membrane protein [Streptococcus pyogenes str. Manfredo] Length = 216 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 41/131 (31%), Positives = 74/131 (56%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P + Y+ S +AA+I+E+ RS + A+ +GQ EAA ALGL + + ++LPQA R Sbjct: 85 PALLCAYLGFSMVSAAYISEVFRSSIEAIDKGQWEAAKALGLPYALMVKKIILPQAFRIA 144 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 +PPL + ++++K+SSLA + D+ I + + + ++ FIY ++ ++ Sbjct: 145 VPPLGNVIIDMVKSSSLAAMITVPDIFQNAKIIGGREWDYMSMYILVAFIYWLIAFLLER 204 Query: 384 FMNRLNAKIAL 394 + L K+AL Sbjct: 205 YQEFLENKLAL 215 >gi|78357350|ref|YP_388799.1| amino acid ABC transporter permease [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78219755|gb|ABB39104.1| amino acid ABC transporter membrane protein, PAAT family [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 261 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 50/163 (30%), Positives = 91/163 (55%), Gaps = 16/163 (9%) Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290 G+P LV QL + LG+F + P ++ IA+S A++ E+ R+G+ Sbjct: 106 GIPLLV------QLFYIYYALGRFLQV------PSMVAAVIAMSVCYGAYMGEVFRAGID 153 Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 ++ +GQ EA+ +LG + + LV+LPQA R+I+PP+ ++++ +LK++SL + AD++ Sbjct: 154 SIDKGQTEASRSLGFNNVQTMFLVILPQAWRTILPPVGNEFIAMLKDTSLVSILAVADVL 213 Query: 351 SVGGTIINQTGQAIE----IILIWMFIYLSLSIMIALFMNRLN 389 G ++ E + LI++ I L LS +++ RLN Sbjct: 214 RRGREFAAESFLYFETYTMVALIYLVITLLLSKAVSIMEARLN 256 >gi|15674926|ref|NP_269100.1| putative ABC transporter permease [Streptococcus pyogenes M1 GAS] gi|71910520|ref|YP_282070.1| cystine transporter permease [Streptococcus pyogenes MGAS5005] gi|209559254|ref|YP_002285726.1| Probable amino-acid ABC transporter permease protein yckA [Streptococcus pyogenes NZ131] gi|251782585|ref|YP_002996888.1| cystine transport system permease [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|13622068|gb|AAK33821.1| putative ABC transporter (permease) [Streptococcus pyogenes M1 GAS] gi|71853302|gb|AAZ51325.1| cystine transport system permease protein [Streptococcus pyogenes MGAS5005] gi|209540455|gb|ACI61031.1| Probable amino-acid ABC transporter permease protein yckA [Streptococcus pyogenes NZ131] gi|242391215|dbj|BAH81674.1| cystine transport system permease protein [Streptococcus dysgalactiae subsp. equisimilis GGS_124] Length = 216 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 41/131 (31%), Positives = 74/131 (56%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P + Y+ S +AA+I+E+ RS + A+ +GQ EAA ALGL + + ++LPQA R Sbjct: 85 PALLCAYLGFSMVSAAYISEVFRSSIEAIDKGQWEAAKALGLPYALMVKKIILPQAFRIA 144 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 +PPL + ++++K+SSLA + D+ I + + + ++ FIY ++ ++ Sbjct: 145 VPPLGNVIIDMVKSSSLAAMITVPDIFQNAKIIGGREWDYMSMYILVAFIYWLIAFLLER 204 Query: 384 FMNRLNAKIAL 394 + L K+AL Sbjct: 205 YQEFLENKLAL 215 >gi|330975708|gb|EGH75774.1| amino acid ABC transporter permease [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 365 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 33/81 (40%), Positives = 59/81 (72%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I + + +A+IAE+VR G+ A+P+GQ EAA A+GL + ++ LV+LPQA++ +IP + + Sbjct: 235 IGVILFQSAYIAEVVRGGMQAIPKGQYEAASAMGLGYWRSMGLVILPQALKMVIPGIVNT 294 Query: 331 YLNLLKNSSLAVAVGFADLVS 351 ++ L K++SL + +G DL++ Sbjct: 295 FIALFKDTSLVIIIGLFDLLN 315 >gi|257867389|ref|ZP_05647042.1| amino acid ABC transporter [Enterococcus casseliflavus EC30] gi|257873720|ref|ZP_05653373.1| amino acid ABC transporter [Enterococcus casseliflavus EC10] gi|257801445|gb|EEV30375.1| amino acid ABC transporter [Enterococcus casseliflavus EC30] gi|257807884|gb|EEV36706.1| amino acid ABC transporter [Enterococcus casseliflavus EC10] Length = 226 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 54/162 (33%), Positives = 82/162 (50%), Gaps = 20/162 (12%) Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT---AAFIAEIVRS 287 G+P LVL+ L L+F P + +L A+ C+T +AFI EI R Sbjct: 67 GVPALVLLFL---LYFGLPY--------------QLSALSAAIICFTLTSSAFIGEIYRG 109 Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347 + V RGQ +AA ALGL+ K RL++LPQA R +P L++ ++LLK +SLA + Sbjct: 110 SIAGVDRGQFDAAYALGLSFTKTMRLIILPQAFRISVPALSNVAMDLLKGTSLAAMITIP 169 Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 D+ + +T + + ++ IY L I+I RL Sbjct: 170 DIFQKAKIVGGRTFDYMSMYVLVAIIYWLLCILIEAGQKRLE 211 >gi|171058821|ref|YP_001791170.1| polar amino acid ABC transporter inner membrane subunit [Leptothrix cholodnii SP-6] gi|170776266|gb|ACB34405.1| polar amino acid ABC transporter, inner membrane subunit [Leptothrix cholodnii SP-6] Length = 366 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 50/147 (34%), Positives = 86/147 (58%), Gaps = 12/147 (8%) Query: 204 ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVS 263 A L R ++L LY+ LI G+P LI++ + F P+L S S Sbjct: 178 AVALGRRSKLPAIRSLCTLYVE--LIRGVP---LISVLFMASFMFPLLMP------SGTS 226 Query: 264 PE-FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322 P+ + + + ++ ++AA++AEIVR+GL A+P GQ+EAA ++GL + RLV+LPQA+ + Sbjct: 227 PDVLLRVLVGITLFSAAYMAEIVRAGLQAIPAGQLEAAASVGLGWWQTQRLVVLPQALAA 286 Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADL 349 ++P L + ++ + K++SL V +L Sbjct: 287 VVPSLMNNFIAIFKDTSLITVVSLYEL 313 >gi|71737094|ref|YP_273400.1| amino acid ABC transporter permease [Pseudomonas syringae pv. phaseolicola 1448A] gi|71557647|gb|AAZ36858.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. phaseolicola 1448A] Length = 365 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 33/81 (40%), Positives = 59/81 (72%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I + + +A+IAE+VR G+ A+P+GQ EAA A+GL + ++ LV+LPQA++ +IP + + Sbjct: 235 IGVILFQSAYIAEVVRGGMQAIPKGQYEAASAMGLGYWRSMGLVILPQALKMVIPGIVNT 294 Query: 331 YLNLLKNSSLAVAVGFADLVS 351 ++ L K++SL + +G DL++ Sbjct: 295 FIALFKDTSLVIIIGLFDLLN 315 >gi|89896132|ref|YP_519619.1| hypothetical protein DSY3386 [Desulfitobacterium hafniense Y51] gi|89335580|dbj|BAE85175.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 224 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 57/215 (26%), Positives = 109/215 (50%), Gaps = 30/215 (13%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTG--------KALPLLYISTFLIFGLPTLVLIALKY 242 V S LG++LSL R+SR ++ + PL+ F+ FGLP + Sbjct: 32 VMSVPLGLMLSL--GRISRFGVLRSAIGVYIWVFRGTPLMLQLLFVYFGLPFI------- 82 Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302 PV+G+ + +F + +A AA+ AEI R+G+ ++ RGQ E A A Sbjct: 83 ------PVIGEI------LILTDFQAAILAFVLNYAAYFAEIFRAGIQSIERGQYEGARA 130 Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362 LG+T+ + R ++LPQ ++ ++PP++++ + L+K++SL + DL+ ++ + Sbjct: 131 LGMTYGQLMRRIILPQVVKRVLPPVSNETITLVKDTSLIYVLAMNDLLRTTRALVQRDFT 190 Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 I+ +F YL +++++ RL + A ++ Sbjct: 191 MTPFIVAGVF-YLLMTLVLTWGFQRLEKRYAAYDE 224 >gi|317053654|ref|YP_004118788.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea sp. At-9b] gi|316952759|gb|ADU72232.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea sp. At-9b] Length = 220 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 55/159 (34%), Positives = 84/159 (52%), Gaps = 26/159 (16%) Query: 224 ISTFLI-FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282 + FLI FGLP+L LH PV G IALS Y A++ Sbjct: 71 VQLFLIYFGLPSL-------GLHLSPPVAG-----------------IIALSLYCGAYMT 106 Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342 EI+R+GL+++PRG EA ALGL+ R+ R VL AM+++ P L SQ + L +SL Sbjct: 107 EILRAGLVSLPRGLSEAGEALGLSKRQIIRYVLTLPAMQNVFPALASQMVLTLIGTSLIS 166 Query: 343 AVGFADLVSVGGTIINQTGQAIEI-ILIWMFIYLSLSIM 380 +G ++ G + ++T ++ EI +LI + ++S+M Sbjct: 167 QIGVEEIFHSGSFVDSRTFRSFEIYLLICGLYFFAVSLM 205 >gi|190894720|ref|YP_001985013.1| putative amino acid ABC transporter permease [Rhizobium etli CIAT 652] gi|190700381|gb|ACE94463.1| probable amino acid ABC transporter, permease protein [Rhizobium etli CIAT 652] Length = 281 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 42/128 (32%), Positives = 76/128 (59%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +ALS A++ EI RSG+ ++ RGQ EA+ ++G R ++LPQA+ IIPP +Q Sbjct: 154 LALSLCYGAYMTEIFRSGIQSIDRGQWEASRSIGFGFGITMRKIILPQALPVIIPPTGNQ 213 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++++LK+SSL +G +L+ + T+ +T Q +E+++ +Y +SI + L R+ Sbjct: 214 FISMLKDSSLVSVIGVWELMFLARTLGQKTFQHMEMLISAAMLYWIMSIGLELIQARIER 273 Query: 391 KIALKEKK 398 A + + Sbjct: 274 HYARSKVR 281 >gi|167755200|ref|ZP_02427327.1| hypothetical protein CLORAM_00705 [Clostridium ramosum DSM 1402] gi|167705250|gb|EDS19829.1| hypothetical protein CLORAM_00705 [Clostridium ramosum DSM 1402] Length = 234 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 40/120 (33%), Positives = 71/120 (59%) Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 +S T A++AEIVRSG+ +V RGQ E A++LG+T + + ++LPQA+R+ P + +Q++ Sbjct: 109 ISINTGAYMAEIVRSGIQSVDRGQSEGALSLGMTRVQTMKYIILPQAIRNSFPAIGNQFI 168 Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 +K+SS+ +G +L +I T LI +YL L+ + + +N + +I Sbjct: 169 INIKDSSMLNVIGVVELFFQSSSIAGSTMSYSATFLITCLVYLCLTSIATILLNIIEKRI 228 >gi|94988394|ref|YP_596495.1| cystine transport system permease protein [Streptococcus pyogenes MGAS9429] gi|94992276|ref|YP_600375.1| cystine transport system permease protein [Streptococcus pyogenes MGAS2096] gi|94541902|gb|ABF31951.1| cystine transport system permease protein [Streptococcus pyogenes MGAS9429] gi|94545784|gb|ABF35831.1| Cystine transport system permease protein [Streptococcus pyogenes MGAS2096] Length = 216 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 41/131 (31%), Positives = 74/131 (56%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P + Y+ S +AA+I+E+ RS + A+ +GQ EAA ALGL + + ++LPQA R Sbjct: 85 PALLCAYLGFSMVSAAYISEVFRSSIEAIDKGQWEAAKALGLPYALMVKKIILPQAFRIA 144 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 +PPL + ++++K+SSLA + D+ I + + + ++ FIY ++ ++ Sbjct: 145 VPPLGNVIIDMVKSSSLAAMITVPDIFQNAKIIGGREWDYMSMYILVAFIYWIIAFLLER 204 Query: 384 FMNRLNAKIAL 394 + L K+AL Sbjct: 205 YQEFLENKLAL 215 >gi|330950962|gb|EGH51222.1| amino acid ABC transporter permease [Pseudomonas syringae Cit 7] Length = 279 Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 33/81 (40%), Positives = 59/81 (72%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I + + +A+IAE+VR G+ A+P+GQ EAA A+GL + ++ LV+LPQA++ +IP + + Sbjct: 149 IGVILFQSAYIAEVVRGGMQAIPKGQYEAASAMGLGYWRSMGLVILPQALKMVIPGIVNT 208 Query: 331 YLNLLKNSSLAVAVGFADLVS 351 ++ L K++SL + +G DL++ Sbjct: 209 FIALFKDTSLVIIIGLFDLLN 229 >gi|311103257|ref|YP_003976110.1| amino ABC transporter permease, 3-TM region, His/Glu/Gln/Arg/opine family domain-containing protein 4 [Achromobacter xylosoxidans A8] gi|310757946|gb|ADP13395.1| amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family domain protein 4 [Achromobacter xylosoxidans A8] Length = 229 Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 52/192 (27%), Positives = 97/192 (50%), Gaps = 12/192 (6%) Query: 194 FVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP---------TLVLIALKYQL 244 F G+ +L T L+ G L ++ +S F I +P ++ L+ + + Sbjct: 17 FKTGMTFTLTLTALAGVMGLALGTLLAMMRLSRFKILSVPAGIYVNVMRSIPLLLVIFWF 76 Query: 245 HFDKPVLGQFNFIGGST--VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302 +F P + + +G T F S I + + AA+ EI+R+G+ ++ RGQ+ A++A Sbjct: 77 YFLVPYIAAW-VVGSPTPLRVGAFNSAVITFTLFEAAYFCEIMRAGIQSIARGQVSASMA 135 Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362 LGL H + R V+LPQA R+++P L ++ + L +++SL + D + I + G+ Sbjct: 136 LGLNHWQGMRYVVLPQAFRNMLPALLTRIIILFQDTSLVYVLSLTDFLGAAAKIGQRDGR 195 Query: 363 AIEIILIWMFIY 374 +E+ L +Y Sbjct: 196 LVELYLFVAVVY 207 >gi|160936636|ref|ZP_02084003.1| hypothetical protein CLOBOL_01526 [Clostridium bolteae ATCC BAA-613] gi|158440427|gb|EDP18172.1| hypothetical protein CLOBOL_01526 [Clostridium bolteae ATCC BAA-613] Length = 222 Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 67/233 (28%), Positives = 115/233 (49%), Gaps = 27/233 (11%) Query: 160 DHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKAL 219 D + V + FL + L LT+ A V F+LGIVL+L K K Sbjct: 4 DFTSVWQYWPFLYHGAL----LTLKITAICAVLGFLLGIVLALV----------KISKYK 49 Query: 220 PLLYISTFL--IF-GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 PL++ F IF G P LV + + +HF P L F +T ++ + Sbjct: 50 PLIWFGRFYTSIFRGTPLLVQLCI---VHFGLPQLLGFTL---TTTQSGILTF----TLN 99 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 +AA+++EI R G++ V +GQ EA+++LG+ + + +++PQA++ I+P L ++ + LLK Sbjct: 100 SAAYVSEIFRGGIMGVDKGQYEASMSLGIGYGDMMKDIIIPQAVKHILPSLVNEAIALLK 159 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 SS+ +G +L+ I T + E L+ IY ++++ +RL Sbjct: 160 ESSILSYIGAVELLRAADQITVLTFRFFEPYLVIAVIYYVFVMILSAVASRLE 212 >gi|146321731|ref|YP_001201442.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus suis 98HAH33] gi|253752541|ref|YP_003025682.1| glutamine ABC transporter, glutamine-binding protein/permease protein [Streptococcus suis SC84] gi|253754367|ref|YP_003027508.1| glutamine ABC transporter, glutamine-binding protein/permease protein [Streptococcus suis P1/7] gi|253756301|ref|YP_003029441.1| glutamine ABC transporter, glutamine-binding protein/permease protein [Streptococcus suis BM407] gi|145692537|gb|ABP93042.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus suis 98HAH33] gi|251816830|emb|CAZ52475.1| glutamine ABC transporter, glutamine-binding protein/permease protein [Streptococcus suis SC84] gi|251818765|emb|CAZ56603.1| glutamine ABC transporter, glutamine-binding protein/permease protein [Streptococcus suis BM407] gi|251820613|emb|CAR47371.1| glutamine ABC transporter, glutamine-binding protein/permease protein [Streptococcus suis P1/7] gi|292559150|gb|ADE32151.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus suis GZ1] gi|319758952|gb|ADV70894.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus suis JS14] Length = 521 Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 38/109 (34%), Positives = 65/109 (59%) Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 +S T A+++EIVR G+ AV +GQ EAA ALG TH + R ++LPQ +R+I+P ++++ Sbjct: 383 VSINTGAYMSEIVRGGIFAVDKGQFEAATALGFTHNQTMRKIVLPQVIRNILPATGNEFV 442 Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 +K++S+ + +L G T+ QT Q + + IY L+ + Sbjct: 443 INIKDTSVLNVISVVELYFSGNTVATQTYQYFQTFTVIAIIYFILTFTV 491 >gi|66044327|ref|YP_234168.1| amino acid ABC transporter permease [Pseudomonas syringae pv. syringae B728a] gi|63255034|gb|AAY36130.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Pseudomonas syringae pv. syringae B728a] Length = 365 Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 33/81 (40%), Positives = 59/81 (72%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I + + +A+IAE+VR G+ A+P+GQ EAA A+GL + ++ LV+LPQA++ +IP + + Sbjct: 235 IGVILFQSAYIAEVVRGGMQAIPKGQYEAASAMGLGYWRSMGLVILPQALKMVIPGIVNT 294 Query: 331 YLNLLKNSSLAVAVGFADLVS 351 ++ L K++SL + +G DL++ Sbjct: 295 FIALFKDTSLVIIIGLFDLLN 315 >gi|145630170|ref|ZP_01785952.1| ABC-type amino acid transport system permease component [Haemophilus influenzae R3021] gi|145636469|ref|ZP_01792137.1| ABC-type amino acid transport system permease component [Haemophilus influenzae PittHH] gi|148828241|ref|YP_001292994.1| ABC-type amino acid transport system permease [Haemophilus influenzae PittGG] gi|260581868|ref|ZP_05849664.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Haemophilus influenzae NT127] gi|144984451|gb|EDJ91874.1| ABC-type amino acid transport system permease component [Haemophilus influenzae R3021] gi|145270294|gb|EDK10229.1| ABC-type amino acid transport system permease component [Haemophilus influenzae PittHH] gi|148719483|gb|ABR00611.1| ABC-type amino acid transport system permease component [Haemophilus influenzae PittGG] gi|260095061|gb|EEW78953.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Haemophilus influenzae NT127] gi|309973450|gb|ADO96651.1| L-cystine ABC transporter, permease component TcyB [Haemophilus influenzae R2846] Length = 238 Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 62/207 (29%), Positives = 110/207 (53%), Gaps = 19/207 (9%) Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249 F ++ +++++ T S + K +AL +YIS +I G P LV I + + + P Sbjct: 45 FFCGLLIAVIVAVIRTLPSPNLPLKLLQALCRVYIS--IIRGTPMLVQI---FIIFYGLP 99 Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309 +G T+ P F + IA S A+ AE VR+ +IA+P+GQ EA+ A+G+ +R+ Sbjct: 100 EVG-------ITLEP-FPTAIIAFSINIGAYAAETVRASIIAIPKGQWEASYAIGMNYRQ 151 Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369 A ++PQA+R +P L++ +++ +K++SLA V +L V N T E ILI Sbjct: 152 AFIRTIMPQALRISVPSLSNTFISTVKDTSLASLVLVTELFRVAQ---NITAANYEFILI 208 Query: 370 W---MFIYLSLSIMIALFMNRLNAKIA 393 + IY +++ +RL +++ Sbjct: 209 YSEAALIYWIFCFVLSFLQDRLEIRLS 235 >gi|320157819|ref|YP_004190198.1| amino acid ABC transporterpermease [Vibrio vulnificus MO6-24/O] gi|319933131|gb|ADV87995.1| amino acid ABC transporter, permease protein [Vibrio vulnificus MO6-24/O] Length = 223 Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 56/171 (32%), Positives = 94/171 (54%), Gaps = 17/171 (9%) Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV-LIAL 240 TM+ VFS VL ++L+ R F L LYIS F G P LV L L Sbjct: 22 TMEMAILGLVFSLVLAVILANI-----RVFRLPILDPLSQLYISFFR--GTPLLVQLFLL 74 Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300 Y L P++ + F + I L+ + AA++AE +R+ +I + R QMEA+ Sbjct: 75 YYGLPQIFPIMVGLD---------AFSAAVIGLTLHFAAYMAESIRAAIIGIDRSQMEAS 125 Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 +++G+T +A R ++LPQA R +P L + +++++K++SLA +G A++++ Sbjct: 126 LSVGMTTTQAMRRIILPQATRVALPSLMNYFIDMIKSTSLAFTLGVAEIMA 176 >gi|314936089|ref|ZP_07843436.1| amino acid ABC transporter, permease/substrate-binding protein [Staphylococcus hominis subsp. hominis C80] gi|313654708|gb|EFS18453.1| amino acid ABC transporter, permease/substrate-binding protein [Staphylococcus hominis subsp. hominis C80] Length = 484 Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 34/80 (42%), Positives = 57/80 (71%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IAL ++A+IAEI R+G+ AV +GQ EAA LGL + K R ++LPQA+++I+P L ++ Sbjct: 359 IALVINSSAYIAEIFRAGINAVDKGQTEAAQCLGLNYSKTMRYIILPQAIKNILPALGNE 418 Query: 331 YLNLLKNSSLAVAVGFADLV 350 ++ L+K SS+ +G +++ Sbjct: 419 FVTLIKESSIVSTIGVGEIM 438 Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust. Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 4/89 (4%) Query: 72 IDQGIVPYTSDSS----YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAW 127 +D+ DSS Y + G NT ++ G++ ++G L+ +LS KL++W Sbjct: 259 MDKASKDMQDDSSFFDKYGAFFIKGLKNTILISMIGVVLGAVLGALIALAKLSKFKLLSW 318 Query: 128 ICRVYVEVFRNIPPLVVIFFLYKSVLSVL 156 I +Y+E R P LV +F ++ +VL Sbjct: 319 IASIYIEFLRGTPMLVQVFLVFFGTTAVL 347 >gi|258507568|ref|YP_003170319.1| amino acid ABC transporter permease [Lactobacillus rhamnosus GG] gi|257147495|emb|CAR86468.1| ABC transporter, amino acid transporter permease protein [Lactobacillus rhamnosus GG] gi|259648917|dbj|BAI41079.1| ABC transporter permease component [Lactobacillus rhamnosus GG] Length = 237 Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 53/190 (27%), Positives = 95/190 (50%), Gaps = 33/190 (17%) Query: 189 IFVFSFVLGIVLSLFA--TRLSRH-------------FHEKTGKALPLLYISTFLIFGLP 233 I + SF +G++++L TR+S F+ ++ PLL + FGLP Sbjct: 23 IALVSFAIGLIIALVTALTRISVRKGVLIRIAKGIAVFYVWLFRSTPLLVQLFIVFFGLP 82 Query: 234 TLVLIAL-KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292 +L++ + + + D G F S T A+ AE +R+ L+++ Sbjct: 83 SLIIPGIFPHGIKLDPVAAGIITF-----------------SLNTGAYCAETIRASLLSI 125 Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352 GQ EAA A+GL R R +++PQA+R+ IPPL++ +++L+K++SLA ++ ++ V Sbjct: 126 DSGQWEAAYAIGLPRRLVLREIIIPQALRTAIPPLSNSFISLIKDTSLAASITIVEMFQV 185 Query: 353 GGTIINQTGQ 362 I + Q Sbjct: 186 SQQIAAENYQ 195 >gi|240102150|ref|YP_002958458.1| Amino acid ABC transporter, permease protein [Thermococcus gammatolerans EJ3] gi|239909703|gb|ACS32594.1| Amino acid ABC transporter, permease protein [Thermococcus gammatolerans EJ3] Length = 229 Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 48/184 (26%), Positives = 96/184 (52%), Gaps = 23/184 (12%) Query: 212 HEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYI 271 +E T + +PLL I + + +P L+ G +SP F++ + Sbjct: 59 YEGTLRGIPLLAIYFVIFYSMPMLI----------------------GLGLSP-FLAAVV 95 Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 L ++A+ ++I RSG+ AV GQ+EAA++LG++ + R ++LPQA+R IP ++Y Sbjct: 96 GLGIRSSAYQSQIFRSGIQAVDEGQIEAALSLGMSQWQIIRHIVLPQALRMSIPAWMNEY 155 Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 + +LK++S+A+A+G +L +++ T + + YL++ + + N + + Sbjct: 156 VIVLKDTSIALALGIVELTRQATYLVSITAEPFRYYGLAALFYLAMVLPLTYLANWMGKR 215 Query: 392 IALK 395 +K Sbjct: 216 YGIK 219 >gi|237800639|ref|ZP_04589100.1| amino acid ABC transporter permease [Pseudomonas syringae pv. oryzae str. 1_6] gi|331023498|gb|EGI03555.1| amino acid ABC transporter permease [Pseudomonas syringae pv. oryzae str. 1_6] Length = 220 Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 47/164 (28%), Positives = 88/164 (53%), Gaps = 11/164 (6%) Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292 P LVLI L Y F P LG + S + LS Y A++ E+ R+GL+++ Sbjct: 68 PILVLILLIY---FALPGLG--------IRLDKLASFIVTLSLYAGAYLTEVFRAGLLSI 116 Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352 +GQ EA +A+GL + + +P +R+++P L++ +++L K++SLA A+ +L Sbjct: 117 HKGQREAGLAIGLGEWQVRAYITVPVMLRNVLPALSNNFISLFKDTSLAAAIAVPELTYY 176 Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 I ++ + IE L+ +Y+ +IA+ + L ++A++ Sbjct: 177 ARKINVESYRVIETWLVTTALYVVACYVIAMLLRALEQRLAIRR 220 >gi|52078834|ref|YP_077625.1| amino acid ABC transporter permease [Bacillus licheniformis ATCC 14580] gi|52784205|ref|YP_090034.1| YckA [Bacillus licheniformis ATCC 14580] gi|319648872|ref|ZP_08003081.1| YckA protein [Bacillus sp. BT1B_CT2] gi|52002045|gb|AAU21987.1| Amino acid ABC transporter, permease protein YckA [Bacillus licheniformis ATCC 14580] gi|52346707|gb|AAU39341.1| YckA [Bacillus licheniformis ATCC 14580] gi|317388866|gb|EFV69684.1| YckA protein [Bacillus sp. BT1B_CT2] Length = 227 Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 52/169 (30%), Positives = 91/169 (53%), Gaps = 13/169 (7%) Query: 231 GLPTLVLIALKYQLHFDKPVLG-QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289 G+P LV++ + L+F P +G QF + + I S +AA+IAEI+RS L Sbjct: 71 GVPILVIL---FILYFGFPYIGIQFTALAAAL---------IGFSINSAAYIAEIIRSAL 118 Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349 +V RGQ +AA ++G ++ + R V++PQ++R +PPL + L+L+K SSLA + +L Sbjct: 119 SSVDRGQWDAAKSVGFSYWQTMRHVIVPQSVRIALPPLANVMLDLVKASSLAAMITVPEL 178 Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 + + + + ++ IY ++ IAL + L + + KK Sbjct: 179 FQQAKIVGGREFDYMTMYILVALIYWAICSGIALLQDFLEKRTEVYIKK 227 Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust. Identities = 21/61 (34%), Positives = 36/61 (59%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 ++ G NT +++F+ M I+G + GR+S L+ W R+Y+ R +P LV++F L Sbjct: 22 VMQGIWNTLFISFASMFAGLILGFFIALGRMSGLALLRWPARIYISFMRGVPILVILFIL 81 Query: 149 Y 149 Y Sbjct: 82 Y 82 >gi|15604848|ref|NP_219632.1| amino acid ABC transporter ATPase [Chlamydia trachomatis D/UW-3/CX] gi|76788844|ref|YP_327930.1| GlnP [Chlamydia trachomatis A/HAR-13] gi|166154350|ref|YP_001654468.1| putative ABC-membrane transport protein, inner membrane component [Chlamydia trachomatis 434/Bu] gi|166155225|ref|YP_001653480.1| putative ABC-membrane transport protein, inner membrane component [Chlamydia trachomatis L2b/UCH-1/proctitis] gi|237802559|ref|YP_002887753.1| putative ABC-membrane transport protein, inner membrane component [Chlamydia trachomatis B/Jali20/OT] gi|237804476|ref|YP_002888630.1| putative ABC-membrane transport protein, inner membrane component [Chlamydia trachomatis B/TZ1A828/OT] gi|255348491|ref|ZP_05380498.1| putative ABC-membrane transport protein, inner membrane component [Chlamydia trachomatis 70] gi|255503033|ref|ZP_05381423.1| putative ABC-membrane transport protein, inner membrane component [Chlamydia trachomatis 70s] gi|255506704|ref|ZP_05382343.1| putative ABC-membrane transport protein, inner membrane component [Chlamydia trachomatis D(s)2923] gi|301335603|ref|ZP_07223847.1| putative ABC-membrane transport protein, inner membrane component [Chlamydia trachomatis L2tet1] gi|3328528|gb|AAC67720.1| ABC Amino Acid Transporter Permease [Chlamydia trachomatis D/UW-3/CX] gi|76167374|gb|AAX50382.1| GlnP [Chlamydia trachomatis A/HAR-13] gi|165930338|emb|CAP03824.1| putative ABC-membrane transport protein, inner membrane component [Chlamydia trachomatis 434/Bu] gi|165931213|emb|CAP06778.1| putative ABC-membrane transport protein, inner membrane component [Chlamydia trachomatis L2b/UCH-1/proctitis] gi|231272776|emb|CAX09682.1| putative ABC-membrane transport protein, inner membrane component [Chlamydia trachomatis B/TZ1A828/OT] gi|231273793|emb|CAX10576.1| putative ABC-membrane transport protein, inner membrane component [Chlamydia trachomatis B/Jali20/OT] gi|289525171|emb|CBJ14645.1| putative ABC-membrane transport protein, inner membrane component [Chlamydia trachomatis Sweden2] gi|296434718|gb|ADH16896.1| putative ABC-membrane transport protein, inner membrane component [Chlamydia trachomatis E/150] gi|296435645|gb|ADH17819.1| putative ABC-membrane transport protein, inner membrane component [Chlamydia trachomatis G/9768] gi|296436568|gb|ADH18738.1| putative ABC-membrane transport protein, inner membrane component [Chlamydia trachomatis G/11222] gi|296437505|gb|ADH19666.1| putative ABC-membrane transport protein, inner membrane component [Chlamydia trachomatis G/11074] gi|296438436|gb|ADH20589.1| putative ABC-membrane transport protein, inner membrane component [Chlamydia trachomatis E/11023] gi|297140004|gb|ADH96762.1| putative ABC-membrane transport protein, inner membrane component [Chlamydia trachomatis G/9301] gi|297748258|gb|ADI50804.1| GlnP [Chlamydia trachomatis D-EC] gi|297749138|gb|ADI51816.1| GlnP [Chlamydia trachomatis D-LC] Length = 214 Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 68/204 (33%), Positives = 106/204 (51%), Gaps = 14/204 (6%) Query: 189 IFVFSFVLGIVLSL-FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247 I S V G VL T SR+F + K L Y+ + G P + I + Y F Sbjct: 21 ITAISLVCGFVLGWGIGTVNSRYFPCRISKFLGNFYVVA--VRGTPLFIQILIVY---FG 75 Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307 P L + N +SP L IAL+ +AA++AE VR+G+ A+P Q EAA LG T Sbjct: 76 LPSLIKVN------LSPLVAGL-IALTLNSAAYLAENVRAGINALPVQQWEAAKVLGYTG 128 Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367 + +L PQ ++I+P LT+++++L+K SS+ + VG +L V I+ + +E+ Sbjct: 129 PQIFLHILYPQVFKNILPSLTNEFVSLIKESSILMVVGVPELTKVTKDIVARELNPMEMY 188 Query: 368 LIWMFIYLSLSIMIALFMNRLNAK 391 LI +YL ++ + F RL+ K Sbjct: 189 LICAGLYLIMTSAFSYFA-RLSEK 211 >gi|330962157|gb|EGH62417.1| amino acid ABC transporter permease [Pseudomonas syringae pv. maculicola str. ES4326] Length = 365 Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 33/81 (40%), Positives = 59/81 (72%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I + + +A+IAE+VR G+ A+P+GQ EAA A+GL + ++ LV+LPQA++ +IP + + Sbjct: 235 IGVILFQSAYIAEVVRGGMQAIPKGQYEAASAMGLGYWRSMGLVILPQALKMVIPGIVNT 294 Query: 331 YLNLLKNSSLAVAVGFADLVS 351 ++ L K++SL + +G DL++ Sbjct: 295 FIALFKDTSLVIIIGLFDLLN 315 >gi|255322521|ref|ZP_05363666.1| ABC transporter, permease protein [Campylobacter showae RM3277] gi|255300429|gb|EET79701.1| ABC transporter, permease protein [Campylobacter showae RM3277] Length = 236 Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 40/105 (38%), Positives = 71/105 (67%), Gaps = 5/105 (4%) Query: 260 STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319 +T S F IAL ++A++AEIVRSG+ +V +GQMEAA A+GL + + R V+ PQA Sbjct: 101 ATWSDNFYVALIALGLNSSAYVAEIVRSGINSVDKGQMEAARAMGLNYYVSMREVVFPQA 160 Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364 ++I+P L +++++L K +S+ VG+ ++ + T+ +++ QA+ Sbjct: 161 TKNILPALANEFISLFKETSV---VGYISVIDI--TMQSKSLQAV 200 >gi|223039606|ref|ZP_03609893.1| amino acid ABC tansporter, permease protein, His/Glu/Gln/Arg/opine family [Campylobacter rectus RM3267] gi|222879177|gb|EEF14271.1| amino acid ABC tansporter, permease protein, His/Glu/Gln/Arg/opine family [Campylobacter rectus RM3267] Length = 236 Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 40/105 (38%), Positives = 71/105 (67%), Gaps = 5/105 (4%) Query: 260 STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319 +T S F IAL ++A++AEIVRSG+ +V +GQMEAA A+GL + + R V+ PQA Sbjct: 101 ATWSDNFYVALIALGLNSSAYVAEIVRSGINSVDKGQMEAARAMGLNYYVSMREVVFPQA 160 Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364 ++I+P L +++++L K +S+ VG+ ++ + T+ +++ QA+ Sbjct: 161 TKNILPALANEFISLFKETSV---VGYISVIDI--TMQSKSLQAV 200 >gi|19745409|ref|NP_606545.1| putative glutamine-binding periplasmic protein [Streptococcus pyogenes MGAS8232] gi|19747518|gb|AAL97044.1| putative glutamine-binding periplasmic protein [Streptococcus pyogenes MGAS8232] Length = 522 Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 39/109 (35%), Positives = 65/109 (59%) Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 +S T A+++EIVR G+ AV +GQ EAA ALG TH + R ++LPQ +R+I+P ++++ Sbjct: 383 VSINTGAYMSEIVRGGIFAVDKGQFEAATALGFTHGQTMRKIVLPQVVRNILPATGNEFV 442 Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 +K++S+ + +L G T+ QT Q + I IY L+ + Sbjct: 443 INIKDTSVLNVISVVELYFSGNTVATQTYQYFQTFTIIAIIYFVLTFTV 491 >gi|16273641|ref|NP_439236.1| ABC-type amino acid transport system permease component [Haemophilus influenzae Rd KW20] gi|260580164|ref|ZP_05847994.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Haemophilus influenzae RdAW] gi|1074143|pir||H64181 ABC-type transport system probable membrane spanning protein - Haemophilus influenzae (strain Rd KW20) gi|260093448|gb|EEW77381.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Haemophilus influenzae RdAW] Length = 238 Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 62/207 (29%), Positives = 110/207 (53%), Gaps = 19/207 (9%) Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249 F ++ +++++ T S + K +AL +YIS +I G P LV I + + + P Sbjct: 45 FFCGLLIAVIVAVIRTLPSPNLPLKLLQALCRVYIS--IIRGTPMLVQI---FIIFYGLP 99 Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309 +G T+ P F + IA S A+ AE VR+ +IA+P+GQ EA+ A+G+ +R+ Sbjct: 100 EVG-------ITLEP-FPTAIIAFSINIGAYAAETVRASIIAIPKGQWEASYAIGMNYRQ 151 Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369 A ++PQA+R +P L++ +++ +K++SLA V +L V N T E ILI Sbjct: 152 AFIRTIMPQALRISVPSLSNTFISTVKDTSLASLVLVTELFRVAQ---NITAANYEFILI 208 Query: 370 W---MFIYLSLSIMIALFMNRLNAKIA 393 + IY +++ +RL +++ Sbjct: 209 YSEAALIYWIFCFVLSFLQDRLEIRLS 235 >gi|300856478|ref|YP_003781462.1| putative amino acid ABC transporter permease [Clostridium ljungdahlii DSM 13528] gi|300436593|gb|ADK16360.1| predicted ABC-type aminoacid transporter, permease component [Clostridium ljungdahlii DSM 13528] Length = 212 Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 60/201 (29%), Positives = 110/201 (54%), Gaps = 19/201 (9%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 +FS LG +++L ++S+ K KA+ LY T+ G P L+ + Y F PV Sbjct: 27 IFSIPLGCLVAL--GKISKI---KPIKAVLSLY--TWAFRGTPLLLQLFFTY---FGLPV 76 Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 +G +SP + IA + AA++AEI RSG+ ++ +GQ EA+ LG+ + + Sbjct: 77 IG-------IRLSP-LAAASIAFTINYAAYLAEIFRSGIESIDKGQFEASKVLGMNYCQT 128 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370 +++PQA+R++IPP+ ++ +NL+K+S+L +G DL+ ++ + I +I Sbjct: 129 MIKIIIPQAIRNVIPPVCNESINLIKDSALVATIGVGDLLRAAKEVVTR-DFTITPFIIA 187 Query: 371 MFIYLSLSIMIALFMNRLNAK 391 +YL L+ ++ + +L K Sbjct: 188 AILYLILTSVLVMAFRKLEKK 208 >gi|251790087|ref|YP_003004808.1| glutamine ABC transporter permease protein [Dickeya zeae Ech1591] gi|247538708|gb|ACT07329.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya zeae Ech1591] Length = 219 Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 43/128 (33%), Positives = 77/128 (60%), Gaps = 4/128 (3%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + + + + A+IAEI R ++++ +G EA +ALGL+ R R V+ P A+R ++P Sbjct: 90 FSAAVVTIMINSGAYIAEITRGSVLSIHKGFTEAGLALGLSRRDTLRHVIAPLALRRMLP 149 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI----ILIWMFIYLSLSIMI 381 PL +Q++ +K++SL + +G A+L G II +A+EI +I++ I L+LS+++ Sbjct: 150 PLGNQWIISIKDTSLFIVIGVAELTRQGQEIIAGNFRALEIWSAVAVIYLVITLALSMVL 209 Query: 382 ALFMNRLN 389 RL Sbjct: 210 RWLERRLK 217 >gi|227534279|ref|ZP_03964328.1| ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|227188071|gb|EEI68138.1| ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus paracasei subsp. paracasei ATCC 25302] Length = 237 Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 51/186 (27%), Positives = 94/186 (50%), Gaps = 33/186 (17%) Query: 193 SFVLGIVLSLFA--TRLS-------------RHFHEKTGKALPLLYISTFLIFGLPTLVL 237 SF +G++++L TR+S F+ ++ PLL + FGLP+L++ Sbjct: 27 SFAIGLIIALITALTRISVRKGFWITFAKGFASFYVWLFRSTPLLVQLFIVFFGLPSLII 86 Query: 238 IAL-KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296 + + + D V G F S T A+ AE +R+ L+++ GQ Sbjct: 87 PGIFPHGIKLDPVVAGIITF-----------------SLNTGAYCAETIRAALLSIDHGQ 129 Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356 EAA ++GL R R +++PQA+R+ +PPL++ +++L+K++SLA ++ ++ V I Sbjct: 130 WEAAYSVGLPRRLVLREIIIPQALRTAVPPLSNSFISLVKDTSLAASITIVEMFQVSQQI 189 Query: 357 INQTGQ 362 + Q Sbjct: 190 AAENYQ 195 >gi|94994195|ref|YP_602293.1| Cystine transport system permease protein [Streptococcus pyogenes MGAS10750] gi|94547703|gb|ABF37749.1| Cystine transport system permease protein [Streptococcus pyogenes MGAS10750] Length = 216 Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 41/131 (31%), Positives = 74/131 (56%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P + Y+ S +AA+I+E+ RS + A+ +GQ EAA ALGL + + ++LPQA R Sbjct: 85 PALLCAYLGFSMVSAAYISEVFRSSIEAIDKGQWEAAKALGLPYALMVKKIILPQAFRIA 144 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 +PPL + ++++K+SSLA + D+ I + + + ++ FIY ++ ++ Sbjct: 145 VPPLGNVIIDMVKSSSLAAMITVPDIFQNAKIIGGREWDYMSMYILVAFIYWLIAFLLER 204 Query: 384 FMNRLNAKIAL 394 + L K+AL Sbjct: 205 YQEFLENKLAL 215 >gi|219670551|ref|YP_002460986.1| polar amino acid ABC transporter inner membrane subunit [Desulfitobacterium hafniense DCB-2] gi|219540811|gb|ACL22550.1| polar amino acid ABC transporter, inner membrane subunit [Desulfitobacterium hafniense DCB-2] Length = 219 Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 57/215 (26%), Positives = 109/215 (50%), Gaps = 30/215 (13%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTG--------KALPLLYISTFLIFGLPTLVLIALKY 242 V S LG++LSL R+SR ++ + PL+ F+ FGLP + Sbjct: 27 VMSVPLGLMLSL--GRISRFGVLRSAIGVYIWVFRGTPLMLQLLFVYFGLPFI------- 77 Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302 PV+G+ + +F + +A AA+ AEI R+G+ ++ RGQ E A A Sbjct: 78 ------PVIGEI------LILTDFQAAILAFVLNYAAYFAEIFRAGIQSIERGQYEGARA 125 Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362 LG+T+ + R ++LPQ ++ ++PP++++ + L+K++SL + DL+ ++ + Sbjct: 126 LGMTYGQLMRRIILPQVVKRVLPPVSNETITLVKDTSLIYVLAMNDLLRTTRALVQRDFT 185 Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 I+ +F YL +++++ RL + A ++ Sbjct: 186 MTPFIVAGVF-YLLMTLVLTWGFQRLEKRYAAYDE 219 >gi|326204746|ref|ZP_08194601.1| polar amino acid ABC transporter, inner membrane subunit [Clostridium papyrosolvens DSM 2782] gi|325985117|gb|EGD45958.1| polar amino acid ABC transporter, inner membrane subunit [Clostridium papyrosolvens DSM 2782] Length = 387 Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 37/116 (31%), Positives = 65/116 (56%), Gaps = 3/116 (2%) Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315 F+G + + I + + AA++AE VR G+ +P+GQ EAA ALGL + + V+ Sbjct: 243 FLGNGLELNNVLRVMIGFTLFNAAYVAETVRGGMQIIPQGQYEAAQALGLNYVQRITFVI 302 Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ---TGQAIEIIL 368 +PQA+RS++P L + + K++SL V DL+ + ++ G+ +E+ L Sbjct: 303 MPQALRSVVPALVGSVIEVFKDTSLVAIVSLMDLLGIAKRVVANPQFLGRQMEVFL 358 Score = 37.7 bits (86), Expect = 3.1, Method: Compositional matrix adjust. Identities = 19/55 (34%), Positives = 32/55 (58%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIF 146 GF+ T +A ++ + IG L+ GR S ++ W C +Y+EV R +P + V+F Sbjct: 180 GFLLTVLIAVVDIVLSFPIGVLLALGRRSKLVVIRWFCIIYIEVIRGVPLITVLF 234 >gi|241758722|ref|ZP_04756835.1| L-cystine transport system permease protein TcyB [Neisseria flavescens SK114] gi|241320930|gb|EER57143.1| L-cystine transport system permease protein TcyB [Neisseria flavescens SK114] Length = 238 Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 36/121 (29%), Positives = 67/121 (55%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I S A+ +E +R+ +++VP+GQ EA ++G+T+ + R ++ PQA R +PPL+++ Sbjct: 111 IGFSLNVGAYASETIRAAILSVPKGQWEAGFSIGMTYMQTFRRIVAPQAFRVAVPPLSNE 170 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++ L KN+SLA V +L V N+T + + + +Y ++ L RL Sbjct: 171 FIGLFKNTSLAAVVTVTELFRVAQETANRTYDFLPVYIEAALVYWCFCKVLFLIQARLEK 230 Query: 391 K 391 + Sbjct: 231 R 231 >gi|154175001|ref|YP_001409167.1| putative ABC transporter permease protein [Campylobacter curvus 525.92] gi|112802173|gb|EAT99517.1| putative ABC transporter, permease protein [Campylobacter curvus 525.92] Length = 228 Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 37/119 (31%), Positives = 72/119 (60%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IA S A+ +E VR+ +++VP+GQ EAA +LG++H + ++ PQA+R +PPL++ Sbjct: 103 IAFSLNVGAYASESVRASILSVPKGQWEAATSLGMSHAQILHRIIAPQAVRISLPPLSNT 162 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 ++ L+K++SLA ++ D+ V I +T + + + ++ IYL + ++ +L Sbjct: 163 FIGLVKDTSLAASITMVDMFMVAQRIAARTFEPLVLYVLAALIYLVVCTLLTFLQAKLE 221 >gi|116254531|ref|YP_770367.1| putative ABC transporter permease component [Rhizobium leguminosarum bv. viciae 3841] gi|115259179|emb|CAK10297.1| putative ABC transporter permease component [Rhizobium leguminosarum bv. viciae 3841] Length = 216 Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 60/170 (35%), Positives = 91/170 (53%), Gaps = 26/170 (15%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPL-LYISTFLIFGLPTLVLIALKYQLHFDKP 249 VF LG+V SL +RL R P+ +Y+ +I G P L+ I + ++F P Sbjct: 34 VFGIALGLV-SLAQSRLIRT---------PVAIYVD--VIRGTPLLIQI---FFVYFVLP 78 Query: 250 VLG-QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308 G FN EF + AL AAFIAE VR + ++ +GQ EAA ++G+ Sbjct: 79 GFGIGFN---------EFWAGVTALGLNGAAFIAETVRGAVGSIEKGQSEAARSIGMREH 129 Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN 358 + +LLPQA+R I+PP T++ +NL KN+SL A+ +L G +I++ Sbjct: 130 QTLIWILLPQALRQIVPPTTNEVINLTKNTSLLSAISVFELTRSGQSIVS 179 >gi|71910050|ref|YP_281600.1| amino acid ABC transporter permease [Streptococcus pyogenes MGAS5005] gi|71852832|gb|AAZ50855.1| ABC transporter amino acid-binding protein/amino acid ABC transporter permease protein [Streptococcus pyogenes MGAS5005] Length = 522 Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 39/109 (35%), Positives = 65/109 (59%) Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 +S T A+++EIVR G+ AV +GQ EAA ALG TH + R ++LPQ +R+I+P ++++ Sbjct: 383 VSINTGAYMSEIVRGGIFAVDKGQFEAATALGFTHGQTMRKIVLPQVVRNILPATGNEFV 442 Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 +K++S+ + +L G T+ QT Q + I IY L+ + Sbjct: 443 INIKDTSVLNVISVVELYFSGNTVATQTYQYFQTFTIIAIIYFVLTFTV 491 >gi|288555160|ref|YP_003427095.1| glutamine ABC transporter permease [Bacillus pseudofirmus OF4] gi|288546320|gb|ADC50203.1| glutamine ABC transporter permease [Bacillus pseudofirmus OF4] Length = 220 Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 40/122 (32%), Positives = 73/122 (59%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IA++ A+IAEIVR + ++ +GQ EA +LGL+ + R ++ PQA+R +IPPL +Q Sbjct: 97 IAIALNAGAYIAEIVRGSVESIEKGQREAGRSLGLSSSQTMRYIIWPQALRRMIPPLGNQ 156 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++ LK++SL + +L+ G + T E L+ +YL ++I ++F+ R+ Sbjct: 157 FIISLKDTSLFSVIAVGELLYQGRQYASATFTYFEPYLMVCVLYLMITIPASVFLRRVER 216 Query: 391 KI 392 ++ Sbjct: 217 RL 218 Score = 42.0 bits (97), Expect = 0.18, Method: Compositional matrix adjust. Identities = 20/41 (48%), Positives = 25/41 (60%) Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 +IG +G R+S NK + I VYVEV R P LV I F+Y Sbjct: 38 VIGAFIGLARVSKNKFIYGIATVYVEVIRGTPILVQILFIY 78 >gi|288961662|ref|YP_003451972.1| polar amino acid transport system permease protein [Azospirillum sp. B510] gi|288913942|dbj|BAI75428.1| polar amino acid transport system permease protein [Azospirillum sp. B510] Length = 226 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 56/200 (28%), Positives = 104/200 (52%), Gaps = 14/200 (7%) Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252 SF LG+++ L A + R F A Y+ ++I G P LV + L + Sbjct: 30 SFALGLIVGLVAA-VVRLFGPAPLAAAVRFYV--WIIRGTPLLVQLFLIF---------- 76 Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312 + V F + I + +A+ +EI+R+ + +VP+GQ EAA ++G++ +A R Sbjct: 77 -YGLPSAGIVLDAFPAALIGFTLNVSAYTSEIIRAVIGSVPKGQWEAAYSIGMSWPQAMR 135 Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372 +LPQA R +PPL++ +++L+K++SLA A+ +L I+ + + + + + Sbjct: 136 RTILPQAARVAVPPLSNSFISLVKDTSLAAAITVPELFQAAQRIVATSYEPLILYVEAAL 195 Query: 373 IYLSLSIMIALFMNRLNAKI 392 IYL LS +++ RL ++ Sbjct: 196 IYLVLSSVLSALQVRLERRL 215 >gi|209546328|ref|YP_002278218.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209539185|gb|ACI59118.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 213 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 45/132 (34%), Positives = 71/132 (53%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 ++++ I L+ + +A++ EI R + AVPRGQ EAA AL L + R V+LPQA+R +P Sbjct: 82 WVAVAIGLTLHASAYLGEIWRGSIEAVPRGQTEAAKALSLRYVSRMRDVILPQALRISLP 141 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 + L+K +SLA VGF +L G I NQ Q + + + +Y + + + Sbjct: 142 ATIGFLVQLIKGTSLASIVGFTELTRAGNIISNQIFQPLTVFGVVGILYFLMCCPLTILG 201 Query: 386 NRLNAKIALKEK 397 RL K A + Sbjct: 202 ARLERKFAASAR 213 >gi|169829526|ref|YP_001699684.1| amino-acid ABC transporter permease [Lysinibacillus sphaericus C3-41] gi|168994014|gb|ACA41554.1| Probable amino-acid ABC transporter permease protein [Lysinibacillus sphaericus C3-41] Length = 235 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 50/169 (29%), Positives = 84/169 (49%), Gaps = 11/169 (6%) Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289 FGLP LV V+ F+ S+ P + +A + A+ +EI+RSG+ Sbjct: 76 FGLPMLV-----------DGVVNTFHLSFQSSSIPILFFVILAFTFSAGAYASEIIRSGI 124 Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349 ++VP+GQ+EAA A+GLT +A R +LPQA IP T+ ++ L +SLA + +L Sbjct: 125 LSVPKGQLEAAYAIGLTFTQAMRRYVLPQAFGKSIPNFTNVFIGFLHATSLAFFLSIKEL 184 Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 V + + + +E + IY +SI+ +R+ ++ K Sbjct: 185 TGVANIVASVNLKFLEAFIAVGIIYWGISIITESISHRIEKRVMAYSKS 233 >gi|330969252|gb|EGH69318.1| amino acid ABC transporter permease [Pseudomonas syringae pv. aceris str. M302273PT] Length = 365 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 33/81 (40%), Positives = 59/81 (72%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I + + +A+IAE+VR G+ A+P+GQ EAA A+GL + ++ LV+LPQA++ +IP + + Sbjct: 235 IGVILFQSAYIAEVVRGGMQAIPKGQYEAASAMGLGYWRSMGLVILPQALKMVIPGIVNT 294 Query: 331 YLNLLKNSSLAVAVGFADLVS 351 ++ L K++SL + +G DL++ Sbjct: 295 FIALFKDTSLVIIIGLFDLLN 315 >gi|306827502|ref|ZP_07460785.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus pyogenes ATCC 10782] gi|304430300|gb|EFM33326.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus pyogenes ATCC 10782] Length = 216 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 41/131 (31%), Positives = 74/131 (56%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P + Y+ S +AA+I+E+ RS + A+ +GQ EAA ALGL + + ++LPQA R Sbjct: 85 PALLCAYLGFSMVSAAYISEVFRSSIEAIDKGQWEAAKALGLPYGLMVKKIILPQAFRIA 144 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 +PPL + ++++K+SSLA + D+ I + + + ++ FIY ++ ++ Sbjct: 145 VPPLGNVIIDMVKSSSLAAMITVPDIFQNAKIIGGREWDYMSMYILVAFIYWLIAFLLER 204 Query: 384 FMNRLNAKIAL 394 + L K+AL Sbjct: 205 YQEFLENKLAL 215 >gi|184199755|ref|YP_001853962.1| putative amino acid ABC transporter permease protein [Kocuria rhizophila DC2201] gi|183579985|dbj|BAG28456.1| putative amino acid ABC transporter permease protein [Kocuria rhizophila DC2201] Length = 224 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 54/173 (31%), Positives = 92/173 (53%), Gaps = 14/173 (8%) Query: 220 PLLYISTFLIF---GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 PL +IS F ++ G P LV + + + + P G T+S + S +A + Sbjct: 51 PLQWISRFYVWLFRGTPILVQL---FIIFYGLPA-------AGITLS-AWTSAILAFTLN 99 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 T A+ AE +R+ + ++PRGQ+EAA L T + R V+ PQA+R +PPL + ++L+K Sbjct: 100 TGAYAAETLRASVQSIPRGQLEAARTLNYTGWQTVRHVVAPQALRIALPPLGNDLIDLVK 159 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 +SL + + AD+ VG I Q + + IYL++ +++L +RL Sbjct: 160 GTSLVMVITLADVFQVGRQIAATNFQPLALYAEVAVIYLAIFTVLSLLQSRLE 212 >gi|159904733|ref|YP_001548395.1| polar amino acid ABC transporter, inner membrane subunit [Methanococcus maripaludis C6] gi|159886226|gb|ABX01163.1| polar amino acid ABC transporter, inner membrane subunit [Methanococcus maripaludis C6] Length = 219 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 58/190 (30%), Positives = 95/190 (50%), Gaps = 13/190 (6%) Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247 KI + SF+L +++++ + KT + ++Y+ F G P L+ QL F Sbjct: 22 KITIMSFLLAVIIAVLVGSVRAMNFSKTLNLVLMVYVEVFR--GTPLLI------QLFFI 73 Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307 L + ST + + LS A+I+EI+R+ + +VP GQ EAA +LG++ Sbjct: 74 YYGLPSVGIVMSSTFAA-----VLGLSLNGGAYISEIMRAAIQSVPVGQFEAAESLGMSK 128 Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367 ++ ++LPQA R +P L + + LLK SSL + +L +G I +T + EI Sbjct: 129 IESMIYIVLPQAFRITVPSLVNSFSALLKESSLISVLAITELTRIGQLIYTKTSRPFEIY 188 Query: 368 LIWMFIYLSL 377 L IYL L Sbjct: 189 LTIGLIYLVL 198 Score = 38.1 bits (87), Expect = 2.7, Method: Compositional matrix adjust. Identities = 25/68 (36%), Positives = 38/68 (55%), Gaps = 1/68 (1%) Query: 107 ATIIGTLVGAGR-LSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVL 165 A II LVG+ R ++ +K + + VYVEVFR P L+ +FF+Y + SV + + Sbjct: 31 AVIIAVLVGSVRAMNFSKTLNLVLMVYVEVFRGTPLLIQLFFIYYGLPSVGIVMSSTFAA 90 Query: 166 PFGMFLNN 173 G+ LN Sbjct: 91 VLGLSLNG 98 >gi|27382710|ref|NP_774239.1| amino acid ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] gi|27355882|dbj|BAC52864.1| amino acid ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] Length = 243 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 43/129 (33%), Positives = 75/129 (58%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + I + + +A +A +++G+ ++PRGQ AA ALGLT + R VLLP A R I+P Sbjct: 108 FWTAAIGIGFFMSARVAVQLQAGIGSLPRGQKMAATALGLTTVQGYRYVLLPMAFRIILP 167 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PLTS++LN +KN+++A+ +G +L ++ + Q E +YL ++ ++ M Sbjct: 168 PLTSEFLNTIKNTAVAITIGLIELTGQARSMQEFSFQVFEAFTAATILYLLVNAVVVTAM 227 Query: 386 NRLNAKIAL 394 L +A+ Sbjct: 228 RFLERYVAI 236 >gi|225867875|ref|YP_002743823.1| glutamine ABC transporter, glutamine-binding protein/permease protein [Streptococcus equi subsp. zooepidemicus] gi|225701151|emb|CAW98036.1| glutamine ABC transporter, glutamine-binding protein/permease protein [Streptococcus equi subsp. zooepidemicus] Length = 522 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 39/109 (35%), Positives = 65/109 (59%) Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 +S T A+++EIVR G+ AV +GQ EAA ALG TH + R ++LPQ +R+I+P ++++ Sbjct: 383 VSINTGAYMSEIVRGGIFAVDKGQFEAATALGFTHGQTMRQIVLPQVVRNILPATGNEFV 442 Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 +K++S+ + +L G T+ QT Q + I IY L+ + Sbjct: 443 INIKDTSVLNVISVVELYFSGNTVATQTYQYFQTFTIIAIIYFVLTFTV 491 >gi|153011394|ref|YP_001372608.1| polar amino acid ABC transporter, inner membrane subunit [Ochrobactrum anthropi ATCC 49188] gi|151563282|gb|ABS16779.1| polar amino acid ABC transporter, inner membrane subunit [Ochrobactrum anthropi ATCC 49188] Length = 218 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 41/119 (34%), Positives = 72/119 (60%), Gaps = 1/119 (0%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G +SP M+ +I L+ Y AAF AEI+R G++++ GQ +A A+G+ + ++LPQ Sbjct: 85 GFEISPA-MAAFITLTFYGAAFYAEIIRGGIVSIDAGQWDAGRAIGMRRGQLMGKIILPQ 143 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377 A+R ++PPL +Q + LKN+SL + DL+ G + + T + +E + +YL++ Sbjct: 144 ALRRMVPPLVNQSVLQLKNTSLLSVLAVPDLLYQGQLVTSATYRPLETYTLIAVLYLAV 202 >gi|229553604|ref|ZP_04442329.1| L-cystine ABC superfamily ATP binding cassette transporter, membrane protein YckJ [Lactobacillus rhamnosus LMS2-1] gi|258538745|ref|YP_003173244.1| amino acid ABC transporter permease [Lactobacillus rhamnosus Lc 705] gi|229313024|gb|EEN78997.1| L-cystine ABC superfamily ATP binding cassette transporter, membrane protein YckJ [Lactobacillus rhamnosus LMS2-1] gi|257150421|emb|CAR89393.1| ABC transporter, amino acid transporter permease protein [Lactobacillus rhamnosus Lc 705] Length = 237 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 52/190 (27%), Positives = 96/190 (50%), Gaps = 33/190 (17%) Query: 189 IFVFSFVLGIVLSLFA--TRLS--RHFHEKTGKALPLLYISTF-----------LIFGLP 233 I + SF +G++++L TR+S + + K + + Y+ F + FGLP Sbjct: 23 IALVSFAIGLIIALVTALTRISVRKGILIRIAKGIAVFYVWLFRSTPLLVQLFIVFFGLP 82 Query: 234 TLVLIAL-KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292 +L++ + + + D G F S T A+ AE +R+ L+++ Sbjct: 83 SLIIPGIFPHGIKLDPVAAGIITF-----------------SLNTGAYCAETIRASLLSI 125 Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352 GQ EAA A+GL R R +++PQA+R+ IPPL++ +++L+K++SLA ++ ++ V Sbjct: 126 DSGQWEAAYAIGLPRRLVLREIIIPQALRTAIPPLSNSFISLIKDTSLAASITIVEMFQV 185 Query: 353 GGTIINQTGQ 362 I + Q Sbjct: 186 SQQIAAENYQ 195 >gi|191637481|ref|YP_001986647.1| ABC-type amino acid transport system, permease component [Lactobacillus casei BL23] gi|239629529|ref|ZP_04672560.1| ABC-type amino acid transport system protein [Lactobacillus paracasei subsp. paracasei 8700:2] gi|190711783|emb|CAQ65789.1| ABC-type amino acid transport system, permease component [Lactobacillus casei BL23] gi|239528215|gb|EEQ67216.1| ABC-type amino acid transport system protein [Lactobacillus paracasei subsp. paracasei 8700:2] gi|327381526|gb|AEA53002.1| Polar amino acid ABC transporter, inner membrane subunit [Lactobacillus casei LC2W] gi|327384689|gb|AEA56163.1| Polar amino acid ABC transporter, inner membrane subunit [Lactobacillus casei BD-II] Length = 237 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 52/190 (27%), Positives = 96/190 (50%), Gaps = 33/190 (17%) Query: 189 IFVFSFVLGIVLSLFA--TRLS-------------RHFHEKTGKALPLLYISTFLIFGLP 233 I + SF +G++++L TR+S F+ ++ PLL + FGLP Sbjct: 23 IALVSFAIGLIIALITALTRISVRKGFWITFAKGFASFYVWLFRSTPLLVQLFIVFFGLP 82 Query: 234 TLVLIAL-KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292 +L++ + + + D V G F S T A+ AE +R+ L+++ Sbjct: 83 SLIIPGIFPHGIKLDPVVAGIITF-----------------SLNTGAYCAETIRAALLSI 125 Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352 GQ EAA ++GL R R +++PQA+R+ +PPL++ +++L+K++SLA ++ ++ V Sbjct: 126 DHGQWEAAYSVGLPRRLVLREIIIPQALRTAVPPLSNSFISLVKDTSLAASITIVEMFQV 185 Query: 353 GGTIINQTGQ 362 I + Q Sbjct: 186 SQQIAAENYQ 195 >gi|78358782|ref|YP_390231.1| amino acid ABC transporter permease [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78221187|gb|ABB40536.1| amino acid ABC transporter membrane protein, PAAT family [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 217 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 41/122 (33%), Positives = 73/122 (59%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +AL + A+IAEI R + ++ GQMEAA +LG+++ +A ++LPQA++ IPPL +Q Sbjct: 92 LALGIHNGAYIAEIFRGAISSISTGQMEAARSLGMSYPRAMVRIILPQALKRAIPPLGNQ 151 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++ LK+SSLA + +L+ + + +E++ I YL + + + +RL A Sbjct: 152 FIIALKDSSLASTITINELLLKSQQLASSNFMMMEMLAIAALFYLLYTAVFSWLFHRLEA 211 Query: 391 KI 392 K+ Sbjct: 212 KL 213 >gi|152974512|ref|YP_001374029.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152023264|gb|ABS21034.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus cytotoxicus NVH 391-98] Length = 232 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 49/168 (29%), Positives = 91/168 (54%), Gaps = 36/168 (21%) Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST----------FLIF-GLP 233 T + + +F++G++L+ T L+R + + + + +Y+S FLIF GLP Sbjct: 33 TTIPLTIITFIIGLILATL-TALARISNSRILQWIARIYVSIIRGTPLLVQLFLIFYGLP 91 Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293 TL Q+ D + + I S A+ +EI+R+ ++++P Sbjct: 92 TL-------QIEIDP-----------------YTAAVIGFSLNVGAYASEIIRASILSIP 127 Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341 +GQ EAA +G+T+ +A + ++LPQA R IPPL++ +++L+K++SLA Sbjct: 128 KGQWEAAYTMGMTYTQALKRIILPQATRVSIPPLSNTFISLVKDTSLA 175 Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust. Identities = 15/41 (36%), Positives = 26/41 (63%) Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 I+ TL R+S ++++ WI R+YV + R P LV +F ++ Sbjct: 47 ILATLTALARISNSRILQWIARIYVSIIRGTPLLVQLFLIF 87 >gi|158423549|ref|YP_001524841.1| glutamate/aspartate transport system permease protein 1 [Azorhizobium caulinodans ORS 571] gi|158330438|dbj|BAF87923.1| glutamate/aspartate transport system permease protein 1 [Azorhizobium caulinodans ORS 571] Length = 230 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 41/132 (31%), Positives = 74/132 (56%), Gaps = 4/132 (3%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F S ++ + + AA+ EI+R G+ ++ RGQ+ A +ALGLT R+ V+LPQA+R++ P Sbjct: 100 FRSALVSFTLFEAAYFCEIIRGGIQSIRRGQISAGLALGLTRRQTFLKVVLPQAIRNMTP 159 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 L ++ + L +++SL VG D + + + G+ E + +YL +I Sbjct: 160 SLLTRLIVLFQDTSLVYVVGLTDFLGAASKVGARDGRLTEFYVFVAVVYL----VICFAA 215 Query: 386 NRLNAKIALKEK 397 +RL ++ L+ K Sbjct: 216 SRLVKRLELRWK 227 >gi|16119458|ref|NP_396164.1| ABC transporter, membrane spanning protein (amino acid) [Agrobacterium tumefaciens str. C58] gi|15161996|gb|AAK90605.1| ABC transporter, membrane spanning protein (amino acid) [Agrobacterium tumefaciens str. C58] Length = 222 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 45/121 (37%), Positives = 73/121 (60%), Gaps = 1/121 (0%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G SP S+ +ALS Y A+ +EI+RSGL ++P Q+EA + LGLT + ++LP Sbjct: 83 GLKFSPIHASI-VALSIYFGAYASEILRSGLNSIPPSQIEAGVCLGLTRWQVLSRIVLPP 141 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378 A+R+I P +TSQ++ LL +S+A V +L G I ++T ++ E+ + IY +L Sbjct: 142 AIRNIYPSMTSQFVLLLLGTSIASQVSTDELFHAAGFIDSRTYRSFEVYALTCGIYFTLV 201 Query: 379 I 379 + Sbjct: 202 V 202 >gi|328944592|gb|EGG38753.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK1087] Length = 230 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 40/122 (32%), Positives = 73/122 (59%), Gaps = 2/122 (1%) Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 AA IAE+ ++ +AVP+GQ EA +++GLT + ++LPQA R +P LT+ LNL+++ Sbjct: 109 AAMIAEVFKAAYLAVPKGQTEAGLSIGLTPVQTFLRIILPQAFRIALPNLTTALLNLMRD 168 Query: 338 SSLAVAVGFADLVSVGGTII--NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395 ++LA +G D++ G +I N ++E IY ++++++L L + +K Sbjct: 169 AALAYTIGAVDVMGAGQNLISRNLGNYSLETYTALALIYWGIALVVSLVSQLLEKSLTVK 228 Query: 396 EK 397 E+ Sbjct: 229 ER 230 >gi|329910725|ref|ZP_08275366.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Oxalobacteraceae bacterium IMCC9480] gi|327546105|gb|EGF31168.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Oxalobacteraceae bacterium IMCC9480] Length = 221 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 41/124 (33%), Positives = 76/124 (61%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + L+ + A ++AE+ R+GL +VPRGQ EAA A+ L R ++LPQA+R I+P L + Sbjct: 97 VGLALHYACYVAEVYRAGLDSVPRGQWEAAKAMSLGPWNVYRSIVLPQAIRPIVPALGNY 156 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 + + K++ + A+ +L+ I +Q+ + IE I + +L +S+++AL + RL A Sbjct: 157 LIAMFKDTPVLSAITVVELMLQAKNIGSQSFRYIEPITLTGIFFLLISLVVALLVRRLEA 216 Query: 391 KIAL 394 ++ + Sbjct: 217 QLRM 220 >gi|242280378|ref|YP_002992507.1| polar amino acid ABC transporter inner membrane subunit [Desulfovibrio salexigens DSM 2638] gi|242123272|gb|ACS80968.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio salexigens DSM 2638] Length = 367 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 33/83 (39%), Positives = 59/83 (71%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + ++ + +A++AE +R GL + +GQ EAA ALG+++ K T +V+LPQA+R +IPP+ + Sbjct: 238 VGITMFFSAYLAENIRGGLQGISKGQYEAADALGMSYWKKTIVVILPQALRIVIPPMVNN 297 Query: 331 YLNLLKNSSLAVAVGFADLVSVG 353 ++ +LK++SL VG DL+ + Sbjct: 298 FIGILKDTSLVGIVGLVDLLQIA 320 >gi|55820684|ref|YP_139126.1| polar amino acid ABC uptake transporter membrane-spanning protein [Streptococcus thermophilus LMG 18311] gi|55822575|ref|YP_141016.1| amino acid (glutamine) ABC transporter permease [Streptococcus thermophilus CNRZ1066] gi|55736669|gb|AAV60311.1| polar amino acid ABC uptake transporter membrane-spanning protein [Streptococcus thermophilus LMG 18311] gi|55738560|gb|AAV62201.1| amino acid (glutamine) ABC transporter, permease protein [Streptococcus thermophilus CNRZ1066] Length = 227 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 53/161 (32%), Positives = 93/161 (57%), Gaps = 15/161 (9%) Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL-HFDKPV 250 F +LG+++SL ++ K + L LY+ F G P +V I + + L H + P Sbjct: 31 FGTILGVLVSL-----AKRSGIKPLEWLVSLYVWVFR--GTPMVVQIMIAFNLIHMNLPT 83 Query: 251 LGQFNFIGG--STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308 + QF + S + P I LS + A+I+E VR+G+ ++P+GQ+EAA +LG+ Sbjct: 84 V-QFGILNLDLSRIVPGI----IVLSLNSGAYISESVRAGIESIPKGQIEAAYSLGIRPW 138 Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349 R V+LPQA+++I+P L ++++ ++K+SSL +G +L Sbjct: 139 NTMRYVVLPQAIKNILPALGNEFVTIIKDSSLLQTIGVMEL 179 >gi|307312879|ref|ZP_07592508.1| polar amino acid ABC transporter, inner membrane subunit [Sinorhizobium meliloti BL225C] gi|306899393|gb|EFN30026.1| polar amino acid ABC transporter, inner membrane subunit [Sinorhizobium meliloti BL225C] Length = 228 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 59/209 (28%), Positives = 99/209 (47%), Gaps = 30/209 (14%) Query: 196 LGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249 LGI ++ +T RL H + + PLL + FGLP + Sbjct: 38 LGIFCAVMSTSSSPIPRLLVRLHVEVVRNTPLLVQIFVIFFGLPNI-------------- 83 Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309 G +SP S++IAL ++AEIVR G+ A R Q+EAA +LGL++ + Sbjct: 84 ---------GIRLSP-LTSVFIALVLNNGGYVAEIVRGGIEATHRSQVEAAESLGLSYFQ 133 Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369 R V+LP A+ + P+ SQ + L+ ++SL A+G DL ++T + +EI L+ Sbjct: 134 TLRYVILPPALEKVFTPVVSQCVLLMLSTSLVSAIGVEDLTGAAMIASSETFRTMEIYLV 193 Query: 370 WMFIYLSLSIMIALFMNRLNAKIALKEKK 398 +Y+ L+ + +N I + ++ Sbjct: 194 VAMVYVVLNFVFRAVLNVAGLMIFTRSRR 222 >gi|269219463|ref|ZP_06163317.1| ABC amino acid transporter, permease component [Actinomyces sp. oral taxon 848 str. F0332] gi|269211042|gb|EEZ77382.1| ABC amino acid transporter, permease component [Actinomyces sp. oral taxon 848 str. F0332] Length = 372 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 44/125 (35%), Positives = 75/125 (60%), Gaps = 1/125 (0%) Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326 +S + L A+++EI+RSGL +V +GQ EAA ALG++ R+ +++PQAMR I+PP Sbjct: 203 VSAIVGLGLNEGAYLSEIIRSGLNSVDKGQEEAAQALGMSPRQILYRIIIPQAMRVIVPP 262 Query: 327 LTSQYLNLLKNSSLAVAVGFA-DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 ++ +++LK +SL AV F +L V +QT I +++ YL ++ ++ + Sbjct: 263 TGNETISMLKTTSLVTAVPFTFELTKVATDYGSQTLLPIPFLVVAAIWYLVITSVLMIGQ 322 Query: 386 NRLNA 390 RL A Sbjct: 323 ARLEA 327 >gi|261822131|ref|YP_003260237.1| glutamine ABC transporter permease [Pectobacterium wasabiae WPP163] gi|261606144|gb|ACX88630.1| polar amino acid ABC transporter, inner membrane subunit [Pectobacterium wasabiae WPP163] Length = 219 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 40/129 (31%), Positives = 76/129 (58%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + + + + A+IAEI R ++++ G EA +ALGL+ R V+ P A+R ++P Sbjct: 90 FAAAVVTIMINSGAYIAEITRGSVLSIHNGFREAGLALGLSRSATLRHVIAPLALRRMLP 149 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PL +Q++ +K++SL + +G A+L G II +A+EI IYL ++++++ + Sbjct: 150 PLGNQWIISIKDTSLFIVIGVAELTRSGQEIIAGNFRALEIWTAVAIIYLCITLVLSFIL 209 Query: 386 NRLNAKIAL 394 RL ++ + Sbjct: 210 RRLERRLKI 218 >gi|269214011|ref|ZP_05983392.2| L-cystine ABC transporter, permease protein [Neisseria cinerea ATCC 14685] gi|269144798|gb|EEZ71216.1| L-cystine ABC transporter, permease protein [Neisseria cinerea ATCC 14685] Length = 227 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 36/121 (29%), Positives = 67/121 (55%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I S A+ +E +R+ +++VP+GQ EA ++G+T+ + R ++ PQA R +PPL+++ Sbjct: 100 IGFSLNVGAYASETIRAAILSVPKGQWEAGFSIGMTYMQTFRRIVAPQAFRVAVPPLSNE 159 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++ L KN+SLA V +L V N+T + + + +Y ++ L RL Sbjct: 160 FIGLFKNTSLAAVVTVTELFRVAQETANRTYDFLPVYIEAALVYWCFCKVLFLIQARLEE 219 Query: 391 K 391 + Sbjct: 220 R 220 >gi|150376684|ref|YP_001313280.1| polar amino acid ABC transporter inner membrane subunit [Sinorhizobium medicae WSM419] gi|150031231|gb|ABR63347.1| polar amino acid ABC transporter, inner membrane subunit [Sinorhizobium medicae WSM419] Length = 220 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 40/127 (31%), Positives = 75/127 (59%) Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327 S + L+ Y+ A++AE+ R GLIA+P GQ EA +A+GLT + + +P +RS++P L Sbjct: 92 SFVLTLAIYSGAYLAEVFRGGLIAIPPGQREAGLAIGLTEMQIRTSITIPLMLRSVLPSL 151 Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387 S ++L K++SLA A+ +L I ++ + IE ++ +Y++ ++A M Sbjct: 152 GSTIISLFKDTSLAAAIAVPELTFEARKINVESFRVIETWIVASCLYVATCSLLAALMRG 211 Query: 388 LNAKIAL 394 + ++A+ Sbjct: 212 VERRLAV 218 >gi|145638107|ref|ZP_01793717.1| ABC-type amino acid transport system permease component [Haemophilus influenzae PittII] gi|145272436|gb|EDK12343.1| ABC-type amino acid transport system permease component [Haemophilus influenzae PittII] gi|309751273|gb|ADO81257.1| L-cystine ABC transporter, permease component TcyB [Haemophilus influenzae R2866] Length = 238 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 62/207 (29%), Positives = 110/207 (53%), Gaps = 19/207 (9%) Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249 F ++ +++++ T S + K +AL +YIS +I G P LV I + + + P Sbjct: 45 FFCGLLIAVIVAVIRTFPSPNLPLKLLQALCRVYIS--IIRGTPMLVQI---FIIFYGLP 99 Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309 +G T+ P F + IA S A+ AE VR+ +IA+P+GQ EA+ A+G+ +R+ Sbjct: 100 EVG-------ITLEP-FPTAIIAFSINIGAYAAETVRASIIAIPKGQWEASYAIGMNYRQ 151 Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369 A ++PQA+R +P L++ +++ +K++SLA V +L V N T E ILI Sbjct: 152 AFIRTIMPQALRISVPSLSNTFISTVKDTSLASLVLVTELFRVAQ---NITAANYEFILI 208 Query: 370 W---MFIYLSLSIMIALFMNRLNAKIA 393 + IY +++ +RL +++ Sbjct: 209 YSEAALIYWIFCFVLSFLQDRLEIRLS 235 >gi|237799857|ref|ZP_04588318.1| amino acid ABC transporter permease [Pseudomonas syringae pv. oryzae str. 1_6] gi|331022712|gb|EGI02769.1| amino acid ABC transporter permease [Pseudomonas syringae pv. oryzae str. 1_6] Length = 365 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 33/81 (40%), Positives = 59/81 (72%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I + + +A+IAE+VR G+ A+P+GQ EAA A+GL + ++ LV+LPQA++ +IP + + Sbjct: 235 IGVILFQSAYIAEVVRGGMQAIPKGQYEAASAMGLGYWRSMGLVILPQALKMVIPGIVNT 294 Query: 331 YLNLLKNSSLAVAVGFADLVS 351 ++ L K++SL + +G DL++ Sbjct: 295 FIALFKDTSLVIIIGLFDLLN 315 >gi|225075327|ref|ZP_03718526.1| hypothetical protein NEIFLAOT_00330 [Neisseria flavescens NRL30031/H210] gi|224953502|gb|EEG34711.1| hypothetical protein NEIFLAOT_00330 [Neisseria flavescens NRL30031/H210] Length = 238 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 36/121 (29%), Positives = 67/121 (55%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I S A+ +E +R+ +++VP+GQ EA ++G+T+ + R ++ PQA R +PPL+++ Sbjct: 111 IGFSLNVGAYASETIRAAILSVPKGQWEAGFSIGMTYMQTFRRIVAPQAFRVAVPPLSNE 170 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++ L KN+SLA V +L V N+T + + + +Y ++ L RL Sbjct: 171 FIGLFKNTSLAAVVTVTELFRVAQETANRTYDFLPVYIEAALVYWCFCKVLFLIQARLEK 230 Query: 391 K 391 + Sbjct: 231 R 231 >gi|209544208|ref|YP_002276437.1| polar amino acid ABC transporter inner membrane subunit [Gluconacetobacter diazotrophicus PAl 5] gi|209531885|gb|ACI51822.1| polar amino acid ABC transporter, inner membrane subunit [Gluconacetobacter diazotrophicus PAl 5] Length = 499 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 41/91 (45%), Positives = 64/91 (70%), Gaps = 1/91 (1%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G +SP F++ +AL AA+ AE R+GL +V RGQ+EAA+AL +TH +A R V++PQ Sbjct: 357 GLRLSP-FVAGVVALGMNYAAYEAENYRAGLQSVARGQVEAALALNMTHMQALRFVVVPQ 415 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349 A+R +IP +T+ +++LLK+SSL + +L Sbjct: 416 AVRMVIPVMTNDFISLLKDSSLVSVITLTEL 446 >gi|330814054|ref|YP_004358293.1| glutamate Aspartate transport system permease protein GltK [Candidatus Pelagibacter sp. IMCC9063] gi|327487149|gb|AEA81554.1| glutamate Aspartate transport system permease protein GltK [Candidatus Pelagibacter sp. IMCC9063] Length = 347 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 34/97 (35%), Positives = 66/97 (68%) Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315 F+ T + + + IA++ + +A+IAE+VR GL A+PRGQ +AA ++G+ + K+ L++ Sbjct: 204 FLPSGTNLDKLIRVIIAITLFESAYIAEVVRGGLQAIPRGQYDAANSIGMGYWKSHLLII 263 Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352 LPQA++ +IP + + ++ L K++ L + VG +L+ + Sbjct: 264 LPQALKIVIPGVANTFIALFKDTPLILVVGLMELLGM 300 >gi|195978808|ref|YP_002124052.1| amino acid ABC transporter, glutamine-binding protein/permease protein [Streptococcus equi subsp. zooepidemicus MGCS10565] gi|225871211|ref|YP_002747158.1| glutamine ABC transporter, glutamine-binding protein/permease protein [Streptococcus equi subsp. equi 4047] gi|195975513|gb|ACG63039.1| amino acid ABC transporter, glutamine-binding protein/permease protein [Streptococcus equi subsp. zooepidemicus MGCS10565] gi|225700615|emb|CAW95155.1| glutamine ABC transporter, glutamine-binding protein/permease protein [Streptococcus equi subsp. equi 4047] Length = 522 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 39/109 (35%), Positives = 65/109 (59%) Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 +S T A+++EIVR G+ AV +GQ EAA ALG TH + R ++LPQ +R+I+P ++++ Sbjct: 383 VSINTGAYMSEIVRGGIFAVDKGQFEAATALGFTHGQTMRQIVLPQVVRNILPATGNEFV 442 Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 +K++S+ + +L G T+ QT Q + I IY L+ + Sbjct: 443 INIKDTSVLNVISVVELYFSGNTVATQTYQYFQTFTIIAIIYFVLTFTV 491 >gi|83592338|ref|YP_426090.1| amino acid ABC transporter permease [Rhodospirillum rubrum ATCC 11170] gi|83575252|gb|ABC21803.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Rhodospirillum rubrum ATCC 11170] Length = 365 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 40/131 (30%), Positives = 79/131 (60%), Gaps = 3/131 (2%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I ++ + +A++AE++R GL A+PRGQ EAA ALGL ++T L++LPQA++ +IP + + Sbjct: 235 IGITLFQSAYMAEVIRGGLQAIPRGQFEAASALGLGFWRSTGLIILPQALKLVIPGVVNT 294 Query: 331 YLNLLKNSSLAVAVGFADLV-SVGGTIINQTGQ--AIEIILIWMFIYLSLSIMIALFMNR 387 ++ L K+++L + +G D++ +V I++ A+E + F + ++ + Sbjct: 295 FIALFKDTTLVLIIGLLDILGTVQSAIVDPAWSRVAVEGYIFAGFCFWIFCFGMSRYSQA 354 Query: 388 LNAKIALKEKK 398 L +K+ +K Sbjct: 355 LESKLHTGHRK 365 >gi|326333120|ref|ZP_08199369.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Nocardioidaceae bacterium Broad-1] gi|325949103|gb|EGD41194.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Nocardioidaceae bacterium Broad-1] Length = 322 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 86/289 (29%), Positives = 139/289 (48%), Gaps = 28/289 (9%) Query: 113 LVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172 L+GA ++ K WI V V L+V+ + KS+++ P + + FL Sbjct: 21 LLGARLVARRKPGQWISAVLV--------LLVVAGIVKSLVTN---PRYHWDVVGAFFLR 69 Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232 L LT+ A + V S++LGIVL++ RLS + + A+ YI F + Sbjct: 70 PSILDGLVLTLWLTAAVLVSSYLLGIVLAVM--RLSTNPVLSSVSAV---YIWFFR--SV 122 Query: 233 PTLV-------LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285 P L+ + +L Q+ P L F I + + ++ ++ L+ AAF AEI+ Sbjct: 123 PPLLQLLFWFQMASLYPQISLGIPFLKPFVTIETAHLFSGLLAAFVGLTFDIAAFAAEII 182 Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345 R GL++V GQ EAA ALGL+ + ++LPQAM +IIP + + LLK +S+ + Sbjct: 183 RGGLVSVEAGQTEAAKALGLSKARIFWRIVLPQAMPAIIPASGNLLIGLLKGTSIVSVIA 242 Query: 346 FADLVSVGGTIINQTGQAIEIIL---IWMFIYLSLSIMIALFMNRLNAK 391 DL+ I Q I ++L IW I +++ I F+ R A+ Sbjct: 243 VQDLLYSVQLIYAQNYLVIPLLLVATIWYLILVTVLSTIQFFVERYYAR 291 Score = 43.1 bits (100), Expect = 0.070, Method: Compositional matrix adjust. Identities = 20/63 (31%), Positives = 40/63 (63%) Query: 88 AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147 +IL G V T WL + ++ + ++G ++ RLS N +++ + VY+ FR++PPL+ + F Sbjct: 71 SILDGLVLTLWLTAAVLVSSYLLGIVLAVMRLSTNPVLSSVSAVYIWFFRSVPPLLQLLF 130 Query: 148 LYK 150 ++ Sbjct: 131 WFQ 133 >gi|325125097|gb|ADY84427.1| Amino acid ABC transporter, permease protein [Lactobacillus delbrueckii subsp. bulgaricus 2038] Length = 247 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 55/199 (27%), Positives = 105/199 (52%), Gaps = 9/199 (4%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 + SF+LG++++L T L R +K G L + I F ++ + L+ + ++F P Sbjct: 37 IISFILGLIIAL-VTALVR-ISDKGGGFLIIKAIFRFYVWLFRSTPLLVQLFIVYFGLPY 94 Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 L + F + I S T A+ +E +R+ + +VPR Q EAA ++G+ K Sbjct: 95 LKIPGLLPNGIKLAPFTAGIITFSLNTGAYASETIRAAIQSVPREQWEAAASIGMNRGKT 154 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370 R ++LPQA++ IPPL++ ++ L+K++SLA ++ ++ V I + Q Sbjct: 155 LRRIILPQALKVSIPPLSNSFIGLVKDTSLAASITIVEMFEVSQQIAAENYQP------- 207 Query: 371 MFIYLSLSIMIALFMNRLN 389 + +Y ++++ ALF + L+ Sbjct: 208 LIMYSLVALVYALFCSVLS 226 >gi|22127991|ref|NP_671414.1| amino acid ABC transport system permease [Yersinia pestis KIM 10] gi|21961137|gb|AAM87665.1|AE014013_10 putative amino acid ABC transport system permease [Yersinia pestis KIM 10] Length = 269 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 54/216 (25%), Positives = 107/216 (49%), Gaps = 11/216 (5%) Query: 177 SFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV 236 +FP + A V S + G+ ++ T L G +L L +P ++ Sbjct: 35 TFPDGPLGGAALTVVISIMAGVASAVLGTVLGVALAMSRGVWAGILAAVLGLFRAIPVIM 94 Query: 237 LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296 LI + +F P++ + PE ++ AL+ +A++A V++G++A+ GQ Sbjct: 95 LI---FWTYFLLPIVFGVDI-------PEITTVVCALALIASAYLAHAVKAGIMAIGAGQ 144 Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356 +A ++LG + ++LPQA+R ++P +Q+++L+K++SLA VG +L + + Sbjct: 145 WQAGLSLGFNRWQTLWFIVLPQALRMMVPSFINQWISLIKDTSLAYIVGVNELTFLATQV 204 Query: 357 INQTG-QAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 N++ +E+ L +Y L + + L N LN + Sbjct: 205 NNRSMVYPMEVFLFVALVYFVLCLALDLLANGLNRR 240 >gi|21909739|ref|NP_664007.1| putative glutamine-binding periplasmic protein [Streptococcus pyogenes MGAS315] gi|28895121|ref|NP_801471.1| glutamine-binding periplasmic protein [Streptococcus pyogenes SSI-1] gi|21903923|gb|AAM78810.1| putative glutamine-binding periplasmic protein [Streptococcus pyogenes MGAS315] gi|28810366|dbj|BAC63304.1| putative glutamine-binding periplasmic protein [Streptococcus pyogenes SSI-1] Length = 522 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 39/109 (35%), Positives = 65/109 (59%) Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 +S T A+++EIVR G+ AV +GQ EAA ALG TH + R ++LPQ +R+I+P ++++ Sbjct: 383 VSINTGAYMSEIVRGGIFAVDKGQFEAATALGFTHGQTMRKIVLPQVVRNILPATGNEFV 442 Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 +K++S+ + +L G T+ QT Q + I IY L+ + Sbjct: 443 INIKDTSVLNVISVVELYFSGNTVATQTYQYFQTFTIIAIIYFVLTFTV 491 >gi|302188402|ref|ZP_07265075.1| amino acid ABC transporter permease [Pseudomonas syringae pv. syringae 642] Length = 365 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 33/81 (40%), Positives = 59/81 (72%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I + + +A+IAE+VR G+ A+P+GQ EAA A+GL + ++ LV+LPQA++ +IP + + Sbjct: 235 IGVILFQSAYIAEVVRGGMQAIPKGQYEAASAMGLGYWRSMGLVILPQALKMVIPGIVNT 294 Query: 331 YLNLLKNSSLAVAVGFADLVS 351 ++ L K++SL + +G DL++ Sbjct: 295 FIALFKDTSLVIIIGLFDLLN 315 >gi|293606724|ref|ZP_06689077.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Achromobacter piechaudii ATCC 43553] gi|292814874|gb|EFF74002.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Achromobacter piechaudii ATCC 43553] Length = 229 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 35/84 (41%), Positives = 57/84 (67%) Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329 +++LS YT+ +++EIV + +VPRGQ E A+ LGL + RLV+LPQAMR I+ P++ Sbjct: 96 FVSLSVYTSCYVSEIVMGAIQSVPRGQTEGAMTLGLRPLQILRLVVLPQAMRLIVQPMSG 155 Query: 330 QYLNLLKNSSLAVAVGFADLVSVG 353 Y+ L+K++++ VG +L G Sbjct: 156 VYVMLIKSTAILSVVGITELTRQG 179 >gi|86742203|ref|YP_482603.1| amino acid ABC transporter permease [Frankia sp. CcI3] gi|86569065|gb|ABD12874.1| amino acid ABC transporter membrane protein 1, PAAT family [Frankia sp. CcI3] Length = 189 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 48/129 (37%), Positives = 76/129 (58%), Gaps = 8/129 (6%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +ALS Y AA + E VRSG+ V GQ EAA ALGLT + R+++LPQA R+++ PL S Sbjct: 63 VALSIYHAALVCEAVRSGINGVDLGQAEAARALGLTFSQTLRMIILPQAFRNVLQPLGSV 122 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA-IEIILIWMFIYLSLSIMIALFMNRLN 389 L++N+S+A A G +L + + A I ++L + YL L++++A Sbjct: 123 VSALIRNTSIAAAFGVQELTGMVQRLTTANPDAVIAVLLGGVVAYLILTVVLA------- 175 Query: 390 AKIALKEKK 398 A ++L E++ Sbjct: 176 AGLSLAERR 184 >gi|241759139|ref|ZP_04757247.1| ArtM protein [Neisseria flavescens SK114] gi|241320558|gb|EER56835.1| ArtM protein [Neisseria flavescens SK114] Length = 219 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 58/181 (32%), Positives = 95/181 (52%), Gaps = 16/181 (8%) Query: 228 LIFGLPTLVLIALKY-----------QLHFDKPVLGQ--FNFIGGSTVSPE---FMSLYI 271 L+FGLP V+ A + +L + P+L Q F + G + + F I Sbjct: 32 LLFGLPVAVVTAYRIRPFYALARAYIELSRNTPLLIQLFFLYYGLPKMGIKWDGFTCGVI 91 Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 AL A+++AE VR+G++AVP+GQ+EA A+GL+ + R V LPQA P + + Sbjct: 92 ALVFLGASYMAEAVRAGILAVPKGQVEAGKAVGLSRFQVFRYVELPQAWAVAFPAVAANV 151 Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 L L+K +S+ AVG A+L+ V +I + E + + YL + + ++L + RL + Sbjct: 152 LFLMKETSVVSAVGIAELLFVTKDVIGMDYKTNEALFLLFAAYLIILLPVSLLVRRLENR 211 Query: 392 I 392 I Sbjct: 212 I 212 >gi|157369428|ref|YP_001477417.1| polar amino acid ABC transporter inner membrane subunit [Serratia proteamaculans 568] gi|157321192|gb|ABV40289.1| polar amino acid ABC transporter, inner membrane subunit [Serratia proteamaculans 568] Length = 295 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 47/136 (34%), Positives = 80/136 (58%), Gaps = 5/136 (3%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 +F + L+ +A+ AEI+R G+I V GQ EAA ALGL + T ++LPQA+RSII Sbjct: 146 QFSVAVLGLTLVQSAYTAEIIRGGIIGVEYGQHEAAAALGLPGYRRTFRIILPQALRSII 205 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI----WMFIYLSLSIM 380 P ++ ++L K +S+ + +L I N+T Q I ++++ ++FI +LS+ Sbjct: 206 PTGFNEIISLAKGTSIVYVLALPELFYTIQVIYNRTQQVIPLLMVATVWYLFITTALSV- 264 Query: 381 IALFMNRLNAKIALKE 396 I ++ R A+ A++E Sbjct: 265 IQYYIERYFARGAVRE 280 >gi|261823410|ref|YP_003261516.1| polar amino acid ABC transporter inner membrane protein [Pectobacterium wasabiae WPP163] gi|261607423|gb|ACX89909.1| polar amino acid ABC transporter, inner membrane subunit [Pectobacterium wasabiae WPP163] Length = 223 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 64/221 (28%), Positives = 117/221 (52%), Gaps = 21/221 (9%) Query: 178 FPTLTMDTNAKIFV------FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231 FP + M +F+ F+ VLG++L+L R + LYIS F G Sbjct: 12 FPQVLMYLPTTLFLAVVSMFFAMVLGLILALV-----RESKIVAVVKIVELYISLFR--G 64 Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291 +P+LV + + ++F P L F S + ++ I S T+A++AEI R+GL + Sbjct: 65 IPSLVQL---FIIYFGLPQL----FPSLSNLDAMTAAI-IGFSLKTSAYMAEIFRAGLAS 116 Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 V GQ EA +++G++ + R ++LPQAM + +P + +++L+K++S+A A+G ++L + Sbjct: 117 VDFGQTEAGLSIGMSKAQVYRRIVLPQAMLNALPATGNTFISLIKDTSVAFALGVSELFA 176 Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 G I ++ + E L+ IY + ++ A +L K+ Sbjct: 177 EGKMIAAESLRFFETFLVVGLIYWMVIVVYAWLQKQLEKKL 217 >gi|238797859|ref|ZP_04641351.1| ABC-type amino acid transport system permease component [Yersinia mollaretii ATCC 43969] gi|238718275|gb|EEQ10099.1| ABC-type amino acid transport system permease component [Yersinia mollaretii ATCC 43969] Length = 254 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 39/129 (30%), Positives = 77/129 (59%), Gaps = 1/129 (0%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 PE ++ AL+ ++A++A V++G++A+ GQ +A ++LG + V+LPQA+R + Sbjct: 94 PEITTVVCALALISSAYLAHAVKAGIVAIGAGQWQAGLSLGFNRWQVLWFVVLPQALRMM 153 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG-QAIEIILIWMFIYLSLSIMIA 382 +P +Q+++L+K++SLA VG +L + + N++ +E+ L +Y L + + Sbjct: 154 VPSFINQWISLIKDTSLAYIVGVNELTFLATQVNNRSMVYPMEVFLFVALVYFVLCLALD 213 Query: 383 LFMNRLNAK 391 L N LN + Sbjct: 214 LLANGLNRR 222 >gi|239816642|ref|YP_002945552.1| polar amino acid ABC transporter inner membrane protein [Variovorax paradoxus S110] gi|239803219|gb|ACS20286.1| polar amino acid ABC transporter, inner membrane subunit [Variovorax paradoxus S110] Length = 217 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 41/121 (33%), Positives = 67/121 (55%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +AL+ YT+AF+ EI R + A+P+GQ EA+ +L L+ + R V+LPQA++ I P Sbjct: 91 VALTLYTSAFLTEIWRGCVAAIPKGQWEASGSLALSFSEQMRHVILPQAVKIAIAPTVGF 150 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 + ++K ++LA +GF +L G I N T Q + +Y L ++L+ L Sbjct: 151 LVQVIKGTALASVIGFVELTKAGSMISNATFQPFVVFSCVALLYFVLCFPVSLYAKNLER 210 Query: 391 K 391 K Sbjct: 211 K 211 >gi|238784129|ref|ZP_04628143.1| Polar amino acid ABC transporter, inner membrane subunit [Yersinia bercovieri ATCC 43970] gi|238714975|gb|EEQ06973.1| Polar amino acid ABC transporter, inner membrane subunit [Yersinia bercovieri ATCC 43970] Length = 219 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 53/176 (30%), Positives = 94/176 (53%), Gaps = 18/176 (10%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 V F +G+V+ L + SR G+ +YIS F G P L + L + L + Sbjct: 31 VAGFFIGVVIYLMESGRSRF-----GRGFAQVYISLFR--GTPVLAQVLLCFYLPGE--- 80 Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 +G S P +++ +AL+ TAA+ ++I+RSG A+P GQ+EAA GL+ R+ Sbjct: 81 ------LGVSL--PGYLAAVLALTLNTAAYQSQILRSGFAAIPPGQLEAAAMCGLSPRQT 132 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 + +PQ +R +P L S+ ++++K S++ + DL+ VG + + T + +E+ Sbjct: 133 LWYIQIPQVLRLTLPSLISELIDVIKASAVVSVIAITDLMRVGQQLASATYRPLEV 188 >gi|312865611|ref|ZP_07725836.1| ABC transporter, permease protein [Streptococcus downei F0415] gi|311098879|gb|EFQ57098.1| ABC transporter, permease protein [Streptococcus downei F0415] Length = 514 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 40/120 (33%), Positives = 70/120 (58%) Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 +S T A+++EIVR G+ AV +GQ EAA ALG +H + R V+LPQ +R+I+P ++++ Sbjct: 384 VSINTGAYMSEIVRGGIYAVDKGQFEAATALGFSHGQTMRKVVLPQVVRNILPATGNEFV 443 Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 +K++S+ + +L G T+ QT + + LI IY L+ + + L ++ Sbjct: 444 INIKDTSVLNVISVVELYFSGNTVATQTYKYFQTFLIIAVIYFILTFTVTRILRYLEHRL 503 >gi|308185548|ref|YP_003929679.1| ABC transport system, permease protein [Pantoea vagans C9-1] gi|308056058|gb|ADO08230.1| Putative ABC transport system, permease protein [Pantoea vagans C9-1] Length = 268 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 42/131 (32%), Positives = 79/131 (60%), Gaps = 5/131 (3%) Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 ALS +A++ EI R+G+ +V RGQMEA ALG+++ +A RLV++PQ +R ++P + +Q+ Sbjct: 107 ALSLIASAYMGEIFRAGIQSVERGQMEACRALGMSYGRAMRLVVIPQGIRRVLPAIVNQF 166 Query: 332 LNLLKNSSLAVAVGF----ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387 + ++K+SSL +G +L VG TG ++L +F YL +++ + +N Sbjct: 167 IAIIKDSSLVYLLGLMTQQRELFRVGQDAAVLTGNLSPLMLAGLF-YLIITVPLTHMVNY 225 Query: 388 LNAKIALKEKK 398 ++ + ++ Sbjct: 226 VDVRYRTGRRR 236 >gi|153830814|ref|ZP_01983481.1| amino acid ABC transporter, permease protein [Vibrio cholerae 623-39] gi|148873698|gb|EDL71833.1| amino acid ABC transporter, permease protein [Vibrio cholerae 623-39] Length = 223 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 53/169 (31%), Positives = 98/169 (57%), Gaps = 11/169 (6%) Query: 183 MDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY 242 + T ++ + V ++L+LF + R F L LYIS F G P LV + L Sbjct: 19 LGTTLEMASWGLVFALILALFLANI-RVFKVPVLDPLSQLYISFFR--GTPLLVQLFL-- 73 Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302 L++ P + F+ + G F + I L+ + AA++AE +R+ +I + R QMEA+++ Sbjct: 74 -LYYGLPQV--FSLLVGLDA---FSAAVIGLTLHFAAYMAESIRAAIIGIDRSQMEASLS 127 Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 +G+T +A R ++LPQA R +P L + +++++K++SLA +G A++++ Sbjct: 128 VGMTTSQAMRRIILPQATRVALPSLMNYFIDMIKSTSLAFTLGVAEIMA 176 >gi|85717304|ref|ZP_01048258.1| polar amino acid ABC transport permease protein [Nitrobacter sp. Nb-311A] gi|85695893|gb|EAQ33797.1| polar amino acid ABC transport permease protein [Nitrobacter sp. Nb-311A] Length = 75 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 40/70 (57%), Positives = 54/70 (77%), Gaps = 1/70 (1%) Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 PPLT+QYLNL KNSSLAVA+G+ DL SV GT ++QTGQAIEI+ I M +YL +S++ + Sbjct: 1 PPLTNQYLNLTKNSSLAVAIGYPDLFSVFAGTTLSQTGQAIEIVAITMGVYLLISLVTSG 60 Query: 384 FMNRLNAKIA 393 M+ + +IA Sbjct: 61 IMSVYSWRIA 70 >gi|311071035|ref|YP_003975958.1| putative ABC transporter permease [Bacillus atrophaeus 1942] gi|310871552|gb|ADP35027.1| putative ABC transporter permease [Bacillus atrophaeus 1942] Length = 224 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 65/224 (29%), Positives = 111/224 (49%), Gaps = 23/224 (10%) Query: 177 SFPTL------TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230 +FPTL T+ +F+ + G+VL+L H+ L +YIS F Sbjct: 12 AFPTLVGALPITLFMAVAAMIFAVIGGLVLALITKNHIPVLHQ-----LSKVYISFFR-- 64 Query: 231 GLPTLV-LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289 G+PTLV L + Y L P + + + + I LS AA++AEI R+ L Sbjct: 65 GVPTLVQLFLIYYGLPQLFPEMSKMTALTAAI---------IGLSLKNAAYLAEIFRAAL 115 Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349 +V GQ+EA +++G+T +A R ++LPQA+R+ IP + ++ LLK +SLA +G ++ Sbjct: 116 NSVDEGQLEACLSVGMTKLQAYRRIILPQAVRNAIPATGNTFIGLLKETSLAFTLGVMEM 175 Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393 + G + + E L +Y L+I+ ++ + I+ Sbjct: 176 FAQGKMYASGNLKYFETYLAVAVVYWILTIIYSVLQDLFERAIS 219 >gi|304391887|ref|ZP_07373829.1| glutamate/glutamine/aspartate/asparagine transport system permease protein BztC [Ahrensia sp. R2A130] gi|303296116|gb|EFL90474.1| glutamate/glutamine/aspartate/asparagine transport system permease protein BztC [Ahrensia sp. R2A130] Length = 432 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 33/82 (40%), Positives = 58/82 (70%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I ++ + +A++AE++R GL A+P+GQ EAA ALGL + +ATRL++LPQA++ IP + + Sbjct: 302 IMVTLFASAYMAEVIRGGLAALPKGQYEAADALGLNYWQATRLIILPQALKISIPGIVNT 361 Query: 331 YLNLLKNSSLAVAVGFADLVSV 352 ++ L K++ L +G D + + Sbjct: 362 FIGLFKDTVLVSIIGILDPIGI 383 >gi|284800042|ref|ZP_05985523.2| L-cystine ABC transporter, permease protein [Neisseria subflava NJ9703] gi|284796209|gb|EFC51556.1| L-cystine ABC transporter, permease protein [Neisseria subflava NJ9703] Length = 227 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 36/121 (29%), Positives = 67/121 (55%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I S A+ +E +R+ +++VP+GQ EA ++G+T+ + R ++ PQA R +PPL+++ Sbjct: 100 IGFSLNVGAYASETIRAAILSVPKGQWEAGFSIGMTYMQTFRRIVAPQAFRVAVPPLSNE 159 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++ L KN+SLA V +L V N+T + + + +Y ++ L RL Sbjct: 160 FIGLFKNTSLAAVVTVTELFRVAQETANRTYDFLPVYIEAALVYWCFCKVLFLIQARLEK 219 Query: 391 K 391 + Sbjct: 220 R 220 >gi|146284417|ref|YP_001174570.1| amino acid ABC transporter, permease protein [Pseudomonas stutzeri A1501] gi|145572622|gb|ABP81728.1| amino acid ABC transporter, permease protein [Pseudomonas stutzeri A1501] gi|327482802|gb|AEA86112.1| amino acid ABC transporter, permease protein [Pseudomonas stutzeri DSM 4166] Length = 229 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 62/189 (32%), Positives = 98/189 (51%), Gaps = 17/189 (8%) Query: 193 SFVLGIVLS--LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 S + G++L+ L R SRH +ALP YI F G P LV + L Y Sbjct: 27 SVITGLILAVPLGIARSSRHL---AVRALPYGYI--FFFRGTPLLVQLFLVYY------G 75 Query: 251 LGQFNFIGGSTVSPEFMSLY----IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306 + QF+ + S + P Y I ++ +TAA+IAEI+R + VP G++EAA ALG++ Sbjct: 76 MAQFDIVRQSALWPYLRDPYWCAIITMTLHTAAYIAEIIRGAIQNVPHGEVEAARALGMS 135 Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 +A ++LP+A R +P +++ + +LK S+LA + +L + I +T E+ Sbjct: 136 RSQALLHIILPRATRIGLPAYSNEVILMLKASALASTITLLELTGMARKIAARTYLHEEM 195 Query: 367 ILIWMFIYL 375 L IYL Sbjct: 196 FLTAGLIYL 204 >gi|86360922|ref|YP_472809.1| amino acid ABC transporter permease [Rhizobium etli CFN 42] gi|86285024|gb|ABC94082.1| probable amino acid ABC transporter, permease protein [Rhizobium etli CFN 42] Length = 281 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 42/128 (32%), Positives = 76/128 (59%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +ALS A++ EI RSG+ ++ RGQ EA+ ++G R ++LPQA+ IIPP +Q Sbjct: 154 LALSLCYGAYMTEIFRSGIQSIDRGQWEASRSIGFGFGITMRKIILPQALPVIIPPTGNQ 213 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++++LK+SSL +G +L+ + T+ +T Q +E+++ +Y +SI + L R+ Sbjct: 214 FISMLKDSSLVSVIGVWELMFLARTLGQKTFQHMEMLISAAMLYWIMSIGLELIQARIER 273 Query: 391 KIALKEKK 398 A + + Sbjct: 274 HYARSKVR 281 >gi|308177956|ref|YP_003917362.1| glutamate ABC transporter inner membrane subunit GluC [Arthrobacter arilaitensis Re117] gi|307745419|emb|CBT76391.1| glutamate ABC transporter, inner membrane subunit GluC [Arthrobacter arilaitensis Re117] Length = 225 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 44/95 (46%), Positives = 58/95 (61%), Gaps = 2/95 (2%) Query: 252 GQFNFIGGSTVSPEFMSL-YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 GQ F+ F L + L+ Y AAF+ E +RSG+ VP GQ EAA A+GL+ A Sbjct: 78 GQLGFVLSGDFQANFFRLAVVGLAVYHAAFVCEAIRSGVNTVPLGQAEAARAIGLSFLPA 137 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345 RLV+LPQA R I PL + + L+KNS++A AVG Sbjct: 138 ARLVILPQAFRGAIVPLGNTLIALIKNSTVA-AVG 171 >gi|33591320|ref|NP_878964.1| glutamate/aspartate transport system permease protein [Bordetella pertussis Tohama I] gi|33570962|emb|CAE40434.1| glutamate/aspartate transport system permease protein [Bordetella pertussis Tohama I] Length = 264 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 63/217 (29%), Positives = 107/217 (49%), Gaps = 14/217 (6%) Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALK 241 T+ T A ++ + +GIV+ + +R K + L Y+ F +P LV + L Sbjct: 42 TLGTAALAWILALGIGIVVGV-----ARTTQSKWARILGATYVEFFR--NIPLLVQMFLW 94 Query: 242 YQLHFDKPVLGQFNFIGG-STVSPE---FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQM 297 Y F P + ++ P F+ + L YT++ +AE VR+G+ + P Q Sbjct: 95 Y---FVVPEILPVQLGDAIKSIPPPWGIFIPAVLCLGFYTSSRVAEQVRAGIESRPARQR 151 Query: 298 EAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII 357 AA ALG+ + R VLLP + R I+PPLTS+ LNL+KN+S+A +G +LV ++ Sbjct: 152 MAATALGMRPSQVYRYVLLPTSFRIILPPLTSELLNLIKNTSVAFTIGLLELVGAARSMQ 211 Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394 + Q E Y L++++ M + ++A+ Sbjct: 212 EFSFQVFEAFAGATLCYFLLNLIVLRAMRYIETRLAV 248 Score = 43.5 bits (101), Expect = 0.055, Method: Compositional matrix adjust. Identities = 33/91 (36%), Positives = 44/91 (48%), Gaps = 4/91 (4%) Query: 85 YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144 Y +L G T A I A IG +VG R + +K + YVE FRNIP LV Sbjct: 31 YLGTLLTGMAWTLGTAALAWILALGIGIVVGVARTTQSKWARILGATYVEFFRNIPLLVQ 90 Query: 145 IFFLYKSVLSVLPI----PDHSIVLPFGMFL 171 +F Y V +LP+ SI P+G+F+ Sbjct: 91 MFLWYFVVPEILPVQLGDAIKSIPPPWGIFI 121 >gi|2507497|sp|P45023|Y1079_HAEIN RecName: Full=Probable amino-acid ABC transporter permease protein HI_0179 gi|1574633|gb|AAC22735.1| amino acid ABC transporter, permease protein [Haemophilus influenzae Rd KW20] Length = 210 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 62/207 (29%), Positives = 110/207 (53%), Gaps = 19/207 (9%) Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249 F ++ +++++ T S + K +AL +YIS +I G P LV I + + + P Sbjct: 17 FFCGLLIAVIVAVIRTLPSPNLPLKLLQALCRVYIS--IIRGTPMLVQI---FIIFYGLP 71 Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309 +G T+ P F + IA S A+ AE VR+ +IA+P+GQ EA+ A+G+ +R+ Sbjct: 72 EVG-------ITLEP-FPTAIIAFSINIGAYAAETVRASIIAIPKGQWEASYAIGMNYRQ 123 Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369 A ++PQA+R +P L++ +++ +K++SLA V +L V N T E ILI Sbjct: 124 AFIRTIMPQALRISVPSLSNTFISTVKDTSLASLVLVTELFRVAQ---NITAANYEFILI 180 Query: 370 W---MFIYLSLSIMIALFMNRLNAKIA 393 + IY +++ +RL +++ Sbjct: 181 YSEAALIYWIFCFVLSFLQDRLEIRLS 207 >gi|22536321|ref|NP_687172.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus agalactiae 2603V/R] gi|25010207|ref|NP_734602.1| hypothetical protein gbs0132 [Streptococcus agalactiae NEM316] gi|76798972|ref|ZP_00781172.1| amino acid ABC transporter, amino acid-binding/permease protein [Streptococcus agalactiae 18RS21] gi|77409056|ref|ZP_00785774.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus agalactiae COH1] gi|77411816|ref|ZP_00788151.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus agalactiae CJB111] gi|77414941|ref|ZP_00791039.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus agalactiae 515] gi|22533144|gb|AAM99044.1|AE014197_12 amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus agalactiae 2603V/R] gi|23094559|emb|CAD45777.1| Unknown [Streptococcus agalactiae NEM316] gi|76585667|gb|EAO62225.1| amino acid ABC transporter, amino acid-binding/permease protein [Streptococcus agalactiae 18RS21] gi|77159009|gb|EAO70222.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus agalactiae 515] gi|77162151|gb|EAO73127.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus agalactiae CJB111] gi|77172350|gb|EAO75501.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus agalactiae COH1] gi|319744066|gb|EFV96443.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus agalactiae ATCC 13813] Length = 516 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 38/109 (34%), Positives = 65/109 (59%) Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 +S T A+++EIVR G+ +V +GQ EAA ALG TH + R ++LPQ +R+I+P ++++ Sbjct: 383 VSINTGAYMSEIVRGGIFSVDKGQFEAATALGFTHGQTMRKIVLPQVVRNILPATGNEFV 442 Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 +K++S+ + +L G T+ QT Q + I IY L+ + Sbjct: 443 INIKDTSVLNVISVVELYFSGNTVATQTYQYFQTFTIIAIIYFILTFTV 491 >gi|328544775|ref|YP_004304884.1| ABC transporter permease protein [Polymorphum gilvum SL003B-26A1] gi|326414517|gb|ADZ71580.1| ABC transporter permease protein [Polymorphum gilvum SL003B-26A1] Length = 221 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 54/177 (30%), Positives = 91/177 (51%), Gaps = 12/177 (6%) Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248 ++ F + VL F T +R H K AL +Y F T +L+ L + ++ Sbjct: 26 VYTFGSIFFGVLIGFVTCAARLSHWKALNALARIYQEIFRC----TPLLVQLLW-FYYAF 80 Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308 P+L IGGS ++ + LS Y AF AEI R G++++ +GQ EAA A+G+ Sbjct: 81 PLL-----IGGSI--DNRVAAMLTLSLYVGAFYAEIFRGGIVSIDKGQREAAAAIGMNPW 133 Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365 ++ ++LPQA++ ++P +Q + KN+SL + ADL + + QT + +E Sbjct: 134 QSMTRIILPQALKRMLPSFINQSVIQFKNTSLVSVISVADLAYMAAVVNGQTYRPLE 190 >gi|315640218|ref|ZP_07895336.1| His/Glu/Gln/Arg/opine ABC superfamily ATP binding cassette transporter permease [Enterococcus italicus DSM 15952] gi|315484007|gb|EFU74485.1| His/Glu/Gln/Arg/opine ABC superfamily ATP binding cassette transporter permease [Enterococcus italicus DSM 15952] Length = 236 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 39/130 (30%), Positives = 77/130 (59%) Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322 S EF++ +ALS + A+I E++R GL ++ +GQMEA +LGL+ + + +++PQA+R Sbjct: 103 SREFLTAVVALSINSGAYICELLRGGLESIDKGQMEAGRSLGLSRWQTMKAIIIPQAVRV 162 Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382 ++P L ++++ ++K SS+ VG D++ + T E +++ IY L+ + Sbjct: 163 VLPGLGNEFIMMIKESSIVSVVGVFDVMYTYNIVKASTYSIFEPLIVVGIIYFLLTAGLT 222 Query: 383 LFMNRLNAKI 392 M+ L ++ Sbjct: 223 SLMSMLEKRM 232 >gi|312278008|gb|ADQ62665.1| Amino acid (Glutamine) ABC transporter, permease protein [Streptococcus thermophilus ND03] Length = 226 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 53/161 (32%), Positives = 93/161 (57%), Gaps = 15/161 (9%) Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL-HFDKPV 250 F +LG+++SL ++ K + L LY+ F G P +V I + + L H + P Sbjct: 30 FGTILGVLVSL-----AKRSGIKPLEWLVSLYVWVFR--GTPMVVQIMIAFNLIHMNLPT 82 Query: 251 LGQFNFIGG--STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308 + QF + S + P I LS + A+I+E VR+G+ ++P+GQ+EAA +LG+ Sbjct: 83 V-QFGILNLDLSRIVPGI----IVLSLNSGAYISESVRAGIESIPKGQIEAAYSLGIRPW 137 Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349 R V+LPQA+++I+P L ++++ ++K+SSL +G +L Sbjct: 138 NTMRYVVLPQAIKNILPALGNEFVTIIKDSSLLQTIGVMEL 178 >gi|298369020|ref|ZP_06980338.1| L-cystine ABC transporter, permease protein [Neisseria sp. oral taxon 014 str. F0314] gi|298283023|gb|EFI24510.1| L-cystine ABC transporter, permease protein [Neisseria sp. oral taxon 014 str. F0314] Length = 238 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 56/202 (27%), Positives = 99/202 (49%), Gaps = 13/202 (6%) Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249 F+ V+ I ++L S KT L YIS +I G P LV + + + + P Sbjct: 43 FLIGMVIAIAVALVRIMPSGGIVRKTLLKLVETYIS--IIRGTPLLVQLVIVF---YGLP 97 Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309 +G F + P + I S A+ +E +R+ +++VP+GQ EA ++G+T+ + Sbjct: 98 SVGIF-------IDP-IPAAIIGFSLNVGAYASETIRAAILSVPKGQWEAGFSIGMTYMQ 149 Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369 R ++ PQA R +PPL+++++ L KN+SLA V +L V N+T + + + Sbjct: 150 TFRRIVAPQAFRVAVPPLSNEFIGLFKNTSLAAVVTVTELFRVAQETANRTYDFLPVYIE 209 Query: 370 WMFIYLSLSIMIALFMNRLNAK 391 +Y ++ L RL + Sbjct: 210 AALVYWCFCKVLFLIQARLENR 231 >gi|229843882|ref|ZP_04464023.1| ABC-type amino acid transport system permease component [Haemophilus influenzae 6P18H1] gi|229812876|gb|EEP48564.1| ABC-type amino acid transport system permease component [Haemophilus influenzae 6P18H1] Length = 238 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 62/205 (30%), Positives = 108/205 (52%), Gaps = 19/205 (9%) Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249 F ++ +++++ T S + K +AL +YIS +I G P LV I + + + P Sbjct: 45 FFCGLLIAVIVAVIRTLPSPNLPLKLLQALCRVYIS--IIRGTPMLVQI---FIIFYGLP 99 Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309 +G T+ P F + IA S A+ AE VR+ +IA+P+GQ EA+ A+G+ +R+ Sbjct: 100 EVG-------ITLEP-FPTAIIAFSINIGAYAAETVRASIIAIPKGQWEASYAIGMNYRQ 151 Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369 A ++PQA+R +P L++ +++ +K++SLA V +L V N T E ILI Sbjct: 152 AFIRTIMPQALRISVPSLSNTFISTVKDTSLASLVLVTELFRVAQ---NITAANYEFILI 208 Query: 370 W---MFIYLSLSIMIALFMNRLNAK 391 + IY +++ +RL + Sbjct: 209 YSEAALIYWIFCFVLSFLQDRLEIR 233 >gi|149187234|ref|ZP_01865532.1| amino acid ABC transporter, permease protein [Vibrio shilonii AK1] gi|148838770|gb|EDL55709.1| amino acid ABC transporter, permease protein [Vibrio shilonii AK1] Length = 300 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 40/112 (35%), Positives = 66/112 (58%) Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317 G ++ +S I + ++A++AEIVR+GL A+P+GQ EA +LGL+ R V+ P Sbjct: 165 GPQSLWENLLSGVICIGLLSSAYVAEIVRAGLNAIPKGQWEAGQSLGLSTWHQYRDVIAP 224 Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369 Q + +I P L Q ++L+K++S+ + ++ VG I N +G EI LI Sbjct: 225 QVLTTISPALAGQAISLVKDTSIVSLISIQEMTFVGTEIANSSGLIFEIWLI 276 >gi|83648450|ref|YP_436885.1| amino acid ABC transporter permease [Hahella chejuensis KCTC 2396] gi|83636493|gb|ABC32460.1| ABC-type amino acid transport system, permease component [Hahella chejuensis KCTC 2396] Length = 365 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 50/160 (31%), Positives = 92/160 (57%), Gaps = 13/160 (8%) Query: 196 LGIVLSL---FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252 +GIV+SL A L R K++ ++YI + G+P LI + + P+ Sbjct: 168 VGIVVSLPIGVALALGRRSEMPIVKSISVVYIEFWR--GVP---LITVLFMASVMLPL-- 220 Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312 F+ T + + + I + + +A++AE+VR GL A+P+GQ EAA +LGL++ K Sbjct: 221 ---FMSEGTETDKLVRAMIGVIMFQSAYMAEVVRGGLQAIPKGQYEAAHSLGLSYWKMMF 277 Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352 ++LPQA++ +IP + + ++ L K++SL + +G DL+++ Sbjct: 278 FIILPQALKLMIPGIVNTFIALFKDTSLVLIIGLFDLLAI 317 >gi|121634582|ref|YP_974827.1| putative amino acid permease integral membrane protein [Neisseria meningitidis FAM18] gi|161869734|ref|YP_001598901.1| amino acid permease integral membrane protein [Neisseria meningitidis 053442] gi|218767907|ref|YP_002342419.1| putative amino acid permease integral membrane protein [Neisseria meningitidis Z2491] gi|304387901|ref|ZP_07370075.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Neisseria meningitidis ATCC 13091] gi|120866288|emb|CAM10029.1| putative amino acid permease integral membrane protein [Neisseria meningitidis FAM18] gi|121051915|emb|CAM08221.1| putative amino acid permease integral membrane protein [Neisseria meningitidis Z2491] gi|161595287|gb|ABX72947.1| amino acid permease integral membrane protein [Neisseria meningitidis 053442] gi|261392845|emb|CAX50426.1| putative amino acid ABC transporter permease protein [Neisseria meningitidis 8013] gi|304338166|gb|EFM04302.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Neisseria meningitidis ATCC 13091] gi|316983780|gb|EFV62761.1| amino ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Neisseria meningitidis H44/76] gi|319410154|emb|CBY90490.1| putative amino acid ABC transporter permease protein [Neisseria meningitidis WUE 2594] gi|325127933|gb|EGC50836.1| L-cystine ABC transporter, permease protein [Neisseria meningitidis N1568] gi|325129938|gb|EGC52738.1| L-cystine ABC transporter, permease protein [Neisseria meningitidis OX99.30304] gi|325131978|gb|EGC54677.1| L-cystine ABC transporter, permease protein [Neisseria meningitidis M6190] gi|325137809|gb|EGC60384.1| L-cystine ABC transporter, permease protein [Neisseria meningitidis ES14902] gi|325140058|gb|EGC62587.1| L-cystine ABC transporter, permease protein [Neisseria meningitidis CU385] gi|325144174|gb|EGC66481.1| L-cystine ABC transporter, permease protein [Neisseria meningitidis M01-240013] gi|325200526|gb|ADY95981.1| L-cystine ABC transporter, permease protein [Neisseria meningitidis H44/76] gi|325203874|gb|ADY99327.1| L-cystine ABC transporter, permease protein [Neisseria meningitidis M01-240355] gi|325206370|gb|ADZ01823.1| L-cystine ABC transporter, permease protein [Neisseria meningitidis M04-240196] Length = 238 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 36/121 (29%), Positives = 67/121 (55%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I S A+ +E +R+ +++VP+GQ EA ++G+T+ + R ++ PQA R +PPL+++ Sbjct: 111 IGFSLNVGAYASETIRAAILSVPKGQWEAGFSIGMTYMQTFRRIVAPQAFRVAVPPLSNE 170 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++ L KN+SLA V +L V N+T + + + +Y ++ L RL Sbjct: 171 FIGLFKNTSLAAVVTVTELFRVAQETANRTYDFLPVYIEAALVYWCFCKVLFLIQARLEK 230 Query: 391 K 391 + Sbjct: 231 R 231 >gi|110636301|ref|YP_676509.1| polar amino acid ABC transporter, inner membrane subunit [Mesorhizobium sp. BNC1] gi|110287285|gb|ABG65344.1| amino acid ABC transporter membrane protein 2, PAAT family [Chelativorans sp. BNC1] Length = 213 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 58/164 (35%), Positives = 83/164 (50%), Gaps = 13/164 (7%) Query: 231 GLPTLVLIALKY-QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289 G+P LVL+ L Y L F G VSP FM+ IALS + A ++ EI RS + Sbjct: 61 GVPPLVLLFLAYFGLAF-----------AGIVVSP-FMASCIALSFFAAVYLGEIWRSAI 108 Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349 ++P Q EA+ +L L+ + V++PQA+R P + L+KN+SLA VG +L Sbjct: 109 QSIPIAQWEASESLSLSWAQQMIYVIVPQAIRLATPSSVGFIVQLVKNTSLASIVGLVEL 168 Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393 G + N T QA ++ L IY + I+L L K A Sbjct: 169 TRAGQLVNNATFQAFQVFLTVAIIYFCICYPISLISRFLEKKTA 212 Score = 36.6 bits (83), Expect = 6.5, Method: Compositional matrix adjust. Identities = 17/54 (31%), Positives = 32/54 (59%) Query: 96 TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 T WL+ + ++ +++G + RLS +KL+ I V + + +PPLV++F Y Sbjct: 19 TVWLSLASLVLGSVVGIGICLLRLSNSKLIGAIAATIVAIGQGVPPLVLLFLAY 72 >gi|300172941|ref|YP_003772107.1| polar amino acid ABC transporter permease [Leuconostoc gasicomitatum LMG 18811] gi|299887320|emb|CBL91288.1| Polar amino acid ABC transporter, permease protein [Leuconostoc gasicomitatum LMG 18811] Length = 213 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 40/129 (31%), Positives = 74/129 (57%), Gaps = 1/129 (0%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P F + IA AA++AEI R GL +VPRGQ +AA LG T + ++LPQ ++ + Sbjct: 82 PRFEAAIIAFIINYAAYLAEIFRGGLQSVPRGQYDAAKVLGFTKIQTFFKIVLPQVIKIV 141 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 +P ++ +NL+K++SL +G D++ G ++ I +L+ + IYL ++ ++ + Sbjct: 142 VPSFGNEVINLVKDTSLVYVIGLGDILRAGNIAASRDVTLIPYLLVGL-IYLIMTAIVTV 200 Query: 384 FMNRLNAKI 392 + R ++ Sbjct: 201 LLRRTEKRL 209 >gi|300725184|ref|YP_003714512.1| putative high-affinity glutamine ABC transporter membrane protein [Xenorhabdus nematophila ATCC 19061] gi|297631729|emb|CBJ92448.1| putative high-affinity glutamine transport protein (ABC superfamily, membrane) [Xenorhabdus nematophila ATCC 19061] Length = 247 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 39/136 (28%), Positives = 79/136 (58%), Gaps = 1/136 (0%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 PE ++ AL+ T+A++A V++G++A+ GQ A ++LG + ++LPQA+R + Sbjct: 94 PEITTVVCALALITSAYLAHGVKAGILAISEGQWRAGLSLGFNRWEVLWYIILPQALRMM 153 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG-QAIEIILIWMFIYLSLSIMIA 382 +P +Q++ L+K++SLA VG +L + + N++ +E+ L IY + + + Sbjct: 154 VPSFINQWIALIKDTSLAYIVGVGELSFLATQVNNRSMVYPMEVFLFVALIYFVMCLSLE 213 Query: 383 LFMNRLNAKIALKEKK 398 L N + + ++K +K Sbjct: 214 LIANYVARRFSVKREK 229 >gi|260655737|ref|ZP_05861206.1| L-cystine ABC transporter, permease protein [Jonquetella anthropi E3_33 E1] gi|260629353|gb|EEX47547.1| L-cystine ABC transporter, permease protein [Jonquetella anthropi E3_33 E1] Length = 226 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 59/202 (29%), Positives = 110/202 (54%), Gaps = 20/202 (9%) Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252 +F++ IV+ L LS+ F LYIS F G P L+A + +F G Sbjct: 37 AFLIAIVMDLRIPGLSQFFR---------LYISFFR--GTP---LMAQLFCFYF-----G 77 Query: 253 QFNFIGGSTVS-PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311 I G+ S F + I LS +AA++AE +R+ + +VP+GQ EAA ++G+T+ +A Sbjct: 78 ILPAIRGAVKSVSSFQAALIILSLASAAYMAESLRAAIGSVPKGQFEAAQSIGMTYPQAM 137 Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371 R ++LPQA+R +P L S ++N++K++SL A+G ++++ + + +E L + Sbjct: 138 RRIILPQAVRVALPTLFSSFINIVKDTSLVFAIGVKEMMAQAQLEGSGNYRYLEAYLCVL 197 Query: 372 FIYLSLSIMIALFMNRLNAKIA 393 ++ +++ ++ L ++A Sbjct: 198 LVFWAITAVMGRTQRALEGRLA 219 >gi|284992301|ref|YP_003410855.1| polar amino acid ABC transporter inner membrane subunit [Geodermatophilus obscurus DSM 43160] gi|284065546|gb|ADB76484.1| polar amino acid ABC transporter, inner membrane subunit [Geodermatophilus obscurus DSM 43160] Length = 301 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 60/162 (37%), Positives = 89/162 (54%), Gaps = 22/162 (13%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF--GLPTLVLIALKYQLHFDK 248 V + VLG+VLS+ RLS H + + ++T + F +P LVLI + L+F Sbjct: 81 VLATVLGLVLSV--GRLSEHRWVR-------VVVTTSIEFFRAVPLLVLI---FALYFLL 128 Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308 P G F +L L Y AA +AEI R+G+++V RGQ EAA LG+ Sbjct: 129 PKFG--------IRLSAFWALVGGLVLYNAAVLAEIFRAGILSVDRGQREAAYGLGMRKT 180 Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 + LVLLPQA+R ++P L +Q + LLK++SL + F +L+ Sbjct: 181 QVMTLVLLPQAVRRMLPVLIAQLVVLLKDTSLGFIISFPELL 222 Score = 45.1 bits (105), Expect = 0.018, Method: Compositional matrix adjust. Identities = 27/86 (31%), Positives = 44/86 (51%) Query: 64 LSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK 123 L+ E + V + S A+ + T +A GM+ AT++G ++ GRLS ++ Sbjct: 40 LAGNGQLEAQRWAVLFDPASQVPQALGQALLRTLQVAIVGMVLATVLGLVLSVGRLSEHR 99 Query: 124 LVAWICRVYVEVFRNIPPLVVIFFLY 149 V + +E FR +P LV+IF LY Sbjct: 100 WVRVVVTTSIEFFRAVPLLVLIFALY 125 >gi|119025599|ref|YP_909444.1| permease protein of ABC transporter for glutamate [Bifidobacterium adolescentis ATCC 15703] gi|118765183|dbj|BAF39362.1| permease protein of ABC transporter for glutamate [Bifidobacterium adolescentis ATCC 15703] Length = 225 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 70/215 (32%), Positives = 100/215 (46%), Gaps = 27/215 (12%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPTLVLIALKYQL 244 +FS +LG++L + +G K LPL I F++ G Sbjct: 29 LFSTILGVILVMMRISPIASLRTVSGAYVELFKNLPLTIIMVFMVLG------------- 75 Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYI-ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 Q F T + F L + LS YTAAF+ E +RSG+ VP GQ EAA AL Sbjct: 76 -----AYAQLKFSFSDTFATNFFWLAVTGLSLYTAAFVCESLRSGINTVPLGQAEAARAL 130 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS--VGGTIINQTG 361 GL +A ++LPQA R + PL + + LLKNS++A A A S + I Sbjct: 131 GLNFMQAATQIILPQAFRGSVAPLGNTLIALLKNSTVAAAASVATETSTMMSEMIEYHAD 190 Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 Q + I LI+ F Y+ L I I + L+ K+A++ Sbjct: 191 QIVPIFLIFAFGYVVLIIPIGMLTTYLSNKLAVRR 225 >gi|251788880|ref|YP_003003601.1| polar amino acid ABC transporter inner membrane subunit [Dickeya zeae Ech1591] gi|247537501|gb|ACT06122.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya zeae Ech1591] Length = 238 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 65/199 (32%), Positives = 106/199 (53%), Gaps = 17/199 (8%) Query: 189 IFVFSFVLGIVLS--LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246 +F SF +G VLS L A R+S + +G A LY+ F G P L+ + L Y Sbjct: 24 LFFSSFAVGAVLSVLLVAMRVSAVW-PLSGFAR--LYMLAFR--GTPLLIQLFLIYY--- 75 Query: 247 DKPVLGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302 LGQF+ + S P F +AL+ TA + AEI+R L+++P GQ+EA +A Sbjct: 76 ---GLGQFSVVRDSLFWPVLRDPFSCAVLALALCTAGYTAEILRGALLSIPAGQIEAGLA 132 Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362 G++ R ++ P A+R +P +++ + L+K+++LA V D+ V II +T + Sbjct: 133 CGMSRWLLLRRIIAPIALRHALPAWSTEAILLIKSTALASLVTVWDVTGVAQQIIQRTYR 192 Query: 363 AIEIILIWMFIYLSLSIMI 381 +E+ + IYL L+ +I Sbjct: 193 TLEVFVCAALIYLLLNFII 211 >gi|238063456|ref|ZP_04608165.1| ABC glutamate transporter permease component [Micromonospora sp. ATCC 39149] gi|237885267|gb|EEP74095.1| ABC glutamate transporter permease component [Micromonospora sp. ATCC 39149] Length = 290 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 39/92 (42%), Positives = 59/92 (64%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 + +L I L Y + +AEI R+G+ AVP GQ E A A+GL + RL+LLPQA RS++ Sbjct: 136 KLWALVIGLMLYNGSVLAEIFRAGINAVPYGQTEGAYAIGLRKNQVLRLILLPQAFRSML 195 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356 P + SQ + LLK+++L + + +L+ VG I Sbjct: 196 PAIVSQLVVLLKDTALGFIITYPELLFVGKQI 227 >gi|146307036|ref|YP_001187501.1| polar amino acid ABC transporter, inner membrane subunit [Pseudomonas mendocina ymp] gi|145575237|gb|ABP84769.1| Diaminopimelate ABC transporter membrane protein / L-cystine ABC transporter membrane protein [Pseudomonas mendocina ymp] Length = 222 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 39/128 (30%), Positives = 74/128 (57%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I S AA+ +EI+R+ + ++ RGQ EAA ++G++ + +LPQA R+ +PPL + Sbjct: 94 IGFSLNMAAYTSEILRAAIASIDRGQWEAAASIGMSKAQTLYRAILPQAARTALPPLGNS 153 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 +++L+K+++LA + +L I +T + + L IY +L+ ++A F RL A Sbjct: 154 FISLVKDTALAATIQVPELFRQAQLITARTFEIFTMYLAAALIYWALASVLAHFQARLEA 213 Query: 391 KIALKEKK 398 ++ E+ Sbjct: 214 RVNRHEQD 221 >gi|238752138|ref|ZP_04613620.1| Inner membrane amino-acid ABC transporter permease protein yhdY [Yersinia rohdei ATCC 43380] gi|238709611|gb|EEQ01847.1| Inner membrane amino-acid ABC transporter permease protein yhdY [Yersinia rohdei ATCC 43380] Length = 346 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 35/76 (46%), Positives = 54/76 (71%) Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335 + +A++AE+VR GL A+P+GQ EAA +LGL + K LV+LPQA++ +IP L + + L Sbjct: 220 FQSAYVAEVVRGGLQALPKGQTEAAESLGLGYWKTQGLVILPQALKMVIPGLVNTIIALF 279 Query: 336 KNSSLAVAVGFADLVS 351 K++SL + +G DL S Sbjct: 280 KDTSLVIIIGLFDLFS 295 >gi|227496261|ref|ZP_03926557.1| amino acid ABC superfamily ATP binding cassette transporter permease protein [Actinomyces urogenitalis DSM 15434] gi|226834186|gb|EEH66569.1| amino acid ABC superfamily ATP binding cassette transporter permease protein [Actinomyces urogenitalis DSM 15434] Length = 285 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 60/193 (31%), Positives = 100/193 (51%), Gaps = 11/193 (5%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL-------VLIALKYQ 243 V + ++GIVL+ AT ++R + + Y+ F G P +L AL + Sbjct: 38 VAAMLIGIVLAA-ATAVARQSENPVLRYVAYAYV--FFFRGTPIYTQLVFWGLLPALYNK 94 Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 L P +F V ++ + L A+++EI+RSGL +V GQ EAA AL Sbjct: 95 LSLGVPFGPEFFVFSTKEVFSGAVAAILGLGLNEGAYLSEIMRSGLNSVDAGQREAASAL 154 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA-DLVSVGGTIINQTGQ 362 G+++ R ++LPQAMR I+PP ++ +++LK +SL +AV F +L V + N+ Q Sbjct: 155 GMSNGTILRRIILPQAMRVIVPPTGNETISMLKTTSLVLAVPFTKELTFVANNVGNRLFQ 214 Query: 363 AIEIILIWMFIYL 375 I ++++ YL Sbjct: 215 PIPLLIVAALWYL 227 >gi|328881416|emb|CCA54655.1| ABC transporter permease [Streptomyces venezuelae ATCC 10712] Length = 282 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 38/113 (33%), Positives = 72/113 (63%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I L+ + AA+ AE+VR G+++V RGQ+EAA +LGL + ++LPQAMR+I+PP + Sbjct: 153 IGLTLHEAAYAAEVVRGGILSVDRGQIEAAQSLGLGRWRRLSRIVLPQAMRAIVPPAGNM 212 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 + LK +S+ + DL+ + ++T + I ++L+ Y++++ +++L Sbjct: 213 LIGTLKGTSIVSVIAVQDLLYSTQLVYHRTYEIIPLLLVATLWYVAVTSVLSL 265 >gi|311695810|gb|ADP98683.1| amino acid ABC transporter, permease protein [marine bacterium HP15] Length = 223 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 46/170 (27%), Positives = 87/170 (51%), Gaps = 23/170 (13%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 + P+L F+ +GLP L+ G + P + A++ Sbjct: 67 RGTPILVQVLFIFYGLPDLI----------------------GGPIDP-LTAGIAAIALN 103 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 + A+I+E+VR G+ ++ +GQ EA ++LGL+ + V+ PQA R +IPPL +Q + +K Sbjct: 104 SGAYISEVVRGGVQSIDKGQTEAGLSLGLSRTQTFWSVVWPQAFRRMIPPLGNQAIVSIK 163 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386 ++SL +G +LV G I T A E+ + +YL++++ +++ + Sbjct: 164 DTSLFSVIGVGELVRQGQIYIANTFTAFEVYFVVAILYLAITLSLSIILR 213 >gi|283785105|ref|YP_003364970.1| putative ABC transporter, inner membrane protein [Citrobacter rodentium ICC168] gi|282948559|emb|CBG88149.1| putative ABC transporter, inner membrane protein [Citrobacter rodentium ICC168] Length = 225 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 54/163 (33%), Positives = 89/163 (54%), Gaps = 17/163 (10%) Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256 GI L+ A R + L++ LI G+P +++I + + + PVL Sbjct: 46 GIALACLAWRFPGVVRKG-------LFVWAELIRGIPLILVI---FWMWYLLPVL----- 90 Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316 GG P +++ +AL+ +TAA + V +GL A+P GQ EAA+ G + +A L+LL Sbjct: 91 TGGDL--PAALTVTLALAWFTAASVMHSVYAGLNALPAGQNEAAVTQGFSPLRALTLILL 148 Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359 PQ +R+++P LT + LLK++SLA V +L +V G + N+ Sbjct: 149 PQVLRNVLPSLTGIAIGLLKDTSLAFIVNVPELTTVAGQVNNR 191 >gi|76788643|ref|YP_328867.1| His/Glu/Gln/Arg/opine amino acid ABC transporter amino acid-binding protein/permease [Streptococcus agalactiae A909] gi|76563700|gb|ABA46284.1| amino acid ABC transporter, amino acid-binding/permease protein, His/Glu/Gln/Arg/opine family [Streptococcus agalactiae A909] Length = 516 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 38/109 (34%), Positives = 65/109 (59%) Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 +S T A+++EIVR G+ +V +GQ EAA ALG TH + R ++LPQ +R+I+P ++++ Sbjct: 383 VSINTGAYMSEIVRGGIFSVDKGQFEAATALGFTHGQTMRKIVLPQVVRNILPATGNEFV 442 Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 +K++S+ + +L G T+ QT Q + I IY L+ + Sbjct: 443 INIKDTSVLNVISVVELYFSGNTVATQTYQYFQTFTIIAIIYFILTFTV 491 >gi|325135989|gb|EGC58599.1| L-cystine ABC transporter, permease protein [Neisseria meningitidis M0579] gi|325142042|gb|EGC64473.1| L-cystine ABC transporter, permease protein [Neisseria meningitidis 961-5945] gi|325198007|gb|ADY93463.1| L-cystine ABC transporter, permease protein [Neisseria meningitidis G2136] gi|325202416|gb|ADY97870.1| L-cystine ABC transporter, permease protein [Neisseria meningitidis M01-240149] gi|325207832|gb|ADZ03284.1| L-cystine ABC transporter, permease protein [Neisseria meningitidis NZ-05/33] Length = 238 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 36/121 (29%), Positives = 67/121 (55%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I S A+ +E +R+ +++VP+GQ EA ++G+T+ + R ++ PQA R +PPL+++ Sbjct: 111 IGFSLNVGAYASETIRAAILSVPKGQWEAGFSIGMTYMQTFRRIVAPQAFRVAVPPLSNE 170 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++ L KN+SLA V +L V N+T + + + +Y ++ L RL Sbjct: 171 FIGLFKNTSLAAVVTVTELFRVAQETANRTYDFLPVYIEAALVYWCFCKVLFLIQARLEK 230 Query: 391 K 391 + Sbjct: 231 R 231 >gi|312867998|ref|ZP_07728202.1| ABC transporter, permease protein [Streptococcus parasanguinis F0405] gi|311096402|gb|EFQ54642.1| ABC transporter, permease protein [Streptococcus parasanguinis F0405] Length = 228 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 60/209 (28%), Positives = 107/209 (51%), Gaps = 15/209 (7%) Query: 195 VLGIVLSLFAT---RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL------H 245 V+ I+LS F L + + K ++ ++Y++ I P ++LI Y L Sbjct: 25 VVSILLSFFPALFLALGQIYKVKGVRSFSVVYLA--FIRATPPILLILFFYSLFPSLLNS 82 Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305 F K + FN ++P + + +I S T +AEI+RS ++ V +GQ+EAA A+GL Sbjct: 83 FFKSIGSHFNVF---EINPIYYA-FIIFSLMTTGSLAEILRSAILTVDKGQLEAAQAIGL 138 Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365 T+R+A ++ PQA+RS +P L + +NL+K +SL + D+ ++ + Q E Sbjct: 139 TNRQAYIRIVFPQALRSALPNLCNLVINLVKGTSLVFVMTIKDITAIAKVEASYGYQYFE 198 Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIAL 394 L+ +Y+ + +I N L ++ L Sbjct: 199 SYLVIFILYIVICGVIQWGFNLLEKRLTL 227 >gi|225016647|ref|ZP_03705839.1| hypothetical protein CLOSTMETH_00556 [Clostridium methylpentosum DSM 5476] gi|224950611|gb|EEG31820.1| hypothetical protein CLOSTMETH_00556 [Clostridium methylpentosum DSM 5476] Length = 232 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 52/179 (29%), Positives = 97/179 (54%), Gaps = 21/179 (11%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPL-----LYISTFLIFGLPTLVLIALKYQLH 245 VF+ +LG+++ +++ + +TGK L +Y++ F G P +V + + Y Sbjct: 36 VFATLLGVIIGTIVA-IAKVYSFQTGKLKILDKILSVYLTVFR--GTPIVVQLMIWY--- 89 Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305 FI ++V + IA + A++AEIVR+G++A+ +GQ EA +LGL Sbjct: 90 ----------FIILTSVDNGVLVAIIAFGINSGAYVAEIVRAGILAIDKGQTEAGRSLGL 139 Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364 + + + ++LPQA ++I+P L ++ + LLK +S+ V DL VG + ++T A+ Sbjct: 140 SSGQTMKSIILPQAFKNILPALGNELIALLKETSVVGYVAVVDLTKVGDLVRSRTMDAV 198 >gi|222083301|ref|YP_002542704.1| ABC transporter membrane spanning protein [Agrobacterium vitis S4] gi|221738681|gb|ACM39519.1| ABC transporter membrane spanning protein [Agrobacterium vitis S4] Length = 226 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 48/139 (34%), Positives = 75/139 (53%), Gaps = 5/139 (3%) Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305 F P FN G + +A+ Y A+I E +RSG ++ RGQ EAA ++GL Sbjct: 80 FPLPAQDWFNANNGDVIFAA-----VAIGLYYGAYICEDIRSGYRSISRGQYEAARSIGL 134 Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365 R++ V++PQA+R+ +P L S+ + LLK++SLA+ +G +L I N+T + Sbjct: 135 NFRQSLHHVMMPQAVRASLPALISRAILLLKSTSLAMVIGVMELTYQTKEIQNETFLTFQ 194 Query: 366 IILIWMFIYLSLSIMIALF 384 I IYL LS+ + L Sbjct: 195 AFSIATIIYLVLSMAVILL 213 >gi|162147152|ref|YP_001601613.1| putative inner membrane amino-acid ABC transporter permease [Gluconacetobacter diazotrophicus PAl 5] gi|161785729|emb|CAP55300.1| putative inner membrane amino-acid ABC transporter permease protein [Gluconacetobacter diazotrophicus PAl 5] Length = 499 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 41/91 (45%), Positives = 64/91 (70%), Gaps = 1/91 (1%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G +SP F++ +AL AA+ AE R+GL +V RGQ+EAA+AL +TH +A R V++PQ Sbjct: 357 GLRLSP-FVAGVVALGMNYAAYEAENYRAGLQSVARGQVEAALALNMTHMQALRFVVVPQ 415 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349 A+R +IP +T+ +++LLK+SSL + +L Sbjct: 416 AVRMVIPVMTNDFISLLKDSSLVSVITLTEL 446 >gi|86742204|ref|YP_482604.1| amino acid ABC transporter permease [Frankia sp. CcI3] gi|86569066|gb|ABD12875.1| amino acid ABC transporter membrane protein 2, PAAT family [Frankia sp. CcI3] Length = 293 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 61/210 (29%), Positives = 103/210 (49%), Gaps = 36/210 (17%) Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTG--------KALPLLYISTFLIFGLPTLVLIALK 241 +F+ +G +L+L RLSR + ++LP+L + F GLP AL Sbjct: 80 MLFASAVGTLLAL--ARLSRRRAVRIPATLLVELFRSLPVLMLILFAYLGLP-----ALG 132 Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301 ++L F +L I L+ Y A ++EI R+G+ +V RGQ EAA Sbjct: 133 WRLS-------------------AFWALVIGLTAYNGAVLSEIFRAGIQSVDRGQTEAAA 173 Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361 A+GL + RL+ PQA+R + P L SQ + LLK++SL + +++L+ G + G Sbjct: 174 AVGLRPVQIFRLIQFPQAIRRMSPTLVSQLVTLLKDTSLGYVIAYSELLRSGRGAVEYLG 233 Query: 362 Q--AIEIILIWMFIYLSLSIMIALFMNRLN 389 A+ I + +Y+ + +++L L+ Sbjct: 234 SRYALPIYTVMAVMYIVTNGLLSLLARWLD 263 Score = 40.4 bits (93), Expect = 0.45, Method: Compositional matrix adjust. Identities = 21/58 (36%), Positives = 35/58 (60%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 G ++T A + M+ A+ +GTL+ RLS + V + VE+FR++P L++I F Y Sbjct: 68 GLLDTLRAALTAMLFASAVGTLLALARLSRRRAVRIPATLLVELFRSLPVLMLILFAY 125 >gi|107026377|ref|YP_623888.1| amino acid ABC transporter permease [Burkholderia cenocepacia AU 1054] gi|116692434|ref|YP_837967.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia cenocepacia HI2424] gi|105895751|gb|ABF78915.1| amino acid ABC transporter membrane protein, PAAT family [Burkholderia cenocepacia AU 1054] gi|116650434|gb|ABK11074.1| amino acid ABC transporter membrane protein, PAAT family [Burkholderia cenocepacia HI2424] Length = 218 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 70/218 (32%), Positives = 115/218 (52%), Gaps = 22/218 (10%) Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL--IFGLPTLVLI 238 +T++ A FV S VLG++L+L ++SR+ T ST + I GLP +V + Sbjct: 19 VTIEITACAFVLSSVLGLILALL--KVSRNRAVATAG-------STIINVIRGLPIIVQL 69 Query: 239 ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQME 298 + ++F P LG + S + L IA S Y A E R+G+ A+ RGQ+E Sbjct: 70 ---FYMYFVLPDLG----VQLSAFQAGVLGLGIAYSAYQA----ENFRAGIEAIDRGQIE 118 Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN 358 AA A+G+ R V+LPQA R +PP + + LLK+SS+A + A++ G I + Sbjct: 119 AAHAIGMRGPMIMRRVVLPQAFRIALPPYGNTLVMLLKDSSVASTITVAEITRAGQLIAS 178 Query: 359 QTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 T Q + + + +YL+L + + +NRL ++A++ Sbjct: 179 STFQNMSVYTLVALLYLALGLPLMFAVNRLGKRLAVRR 216 >gi|330837351|ref|YP_004411992.1| amino acid ABC transporter membrane protein 2, PAAT family [Spirochaeta coccoides DSM 17374] gi|329749254|gb|AEC02610.1| amino acid ABC transporter membrane protein 2, PAAT family [Spirochaeta coccoides DSM 17374] Length = 209 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 41/129 (31%), Positives = 73/129 (56%), Gaps = 3/129 (2%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P +S +A++ +T+A +AEIVR GL + GQ EAA ALGL + ++LPQA++ I Sbjct: 80 PALVSAIVAMTVFTSAMVAEIVRGGLNGIAAGQWEAAKALGLNKFQMYIYIILPQAVKKI 139 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN---QTGQAIEIILIWMFIYLSLSIM 380 + PL Q++ +K++S VG +L+ G I+ ++ + + + FIY +++M Sbjct: 140 LVPLMGQFVTAIKDTSFCWIVGIEELMGAGMIIMGKFVKSSHVLGMYAVIAFIYYMVNVM 199 Query: 381 IALFMNRLN 389 + R+ Sbjct: 200 VNWLSRRVR 208 >gi|288959840|ref|YP_003450180.1| general L-amino acid transport system permease protein [Azospirillum sp. B510] gi|288912148|dbj|BAI73636.1| general L-amino acid transport system permease protein [Azospirillum sp. B510] Length = 357 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 35/91 (38%), Positives = 64/91 (70%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 + + IA+ + +A++AEI+R+GL ++P GQ EAA ALGL + ++ RLV+LPQA+R++I Sbjct: 225 KLLRAQIAIILFVSAYLAEIIRAGLQSIPAGQYEAAQALGLGYWQSMRLVILPQALRTVI 284 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355 P + + + L ++++L + +G DL++ T Sbjct: 285 PSIVTLAIGLFQDTTLIIVIGLFDLLNTART 315 >gi|271502168|ref|YP_003335194.1| polar amino acid ABC transporter inner membrane subunit [Dickeya dadantii Ech586] gi|270345723|gb|ACZ78488.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya dadantii Ech586] Length = 316 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 42/129 (32%), Positives = 75/129 (58%), Gaps = 3/129 (2%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + L+ +A+ AEI+R G++ V GQ EAA ALGL + T ++LPQA+RSI+P ++ Sbjct: 164 LGLTLVQSAYTAEIIRGGILGVDAGQFEAAAALGLPGYRRTWRIILPQALRSILPTGFNE 223 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL---IWMFIYLSLSIMIALFMNR 387 ++L K +S+ + +L I N+T Q I +++ +W + S+ ++ F+ R Sbjct: 224 IISLAKGTSVVYVLALPELFYTVQVIYNRTQQVIPLLMVATVWYLVITSVLSVLQYFVER 283 Query: 388 LNAKIALKE 396 A+ A++E Sbjct: 284 YVARGAVRE 292 >gi|323356726|ref|YP_004223122.1| amino acid ABC transporter permease [Microbacterium testaceum StLB037] gi|323273097|dbj|BAJ73242.1| ABC-type amino acid transport system, permease component [Microbacterium testaceum StLB037] Length = 299 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 42/118 (35%), Positives = 73/118 (61%), Gaps = 11/118 (9%) Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291 +P LV + L L++ PV+G + P + ++ IAL CY + +AE++R+G+ + Sbjct: 112 IPVLVFMFL---LYYGFPVIG-------IRMEP-YWAVVIALVCYNGSVLAEVIRAGVES 160 Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349 +PRGQ EA A+GL RLVLLPQA+R+++P + +Q + LK+++L + + +L Sbjct: 161 LPRGQAEAGYAIGLRKAGVMRLVLLPQAVRAMMPVIIAQLVVTLKDTALGFVITYPEL 218 >gi|313668732|ref|YP_004049016.1| amino acid permease integral membrane protein [Neisseria lactamica ST-640] gi|309379366|emb|CBX21933.1| unnamed protein product [Neisseria lactamica Y92-1009] gi|313006194|emb|CBN87656.1| putative amino acid permease integral membrane protein [Neisseria lactamica 020-06] gi|325134066|gb|EGC56721.1| L-cystine ABC transporter, permease protein [Neisseria meningitidis M13399] Length = 238 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 36/121 (29%), Positives = 67/121 (55%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I S A+ +E +R+ +++VP+GQ EA ++G+T+ + R ++ PQA R +PPL+++ Sbjct: 111 IGFSLNVGAYASETIRAAILSVPKGQWEAGFSIGMTYMQTFRRIVAPQAFRVAVPPLSNE 170 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++ L KN+SLA V +L V N+T + + + +Y ++ L RL Sbjct: 171 FIGLFKNTSLAAVVTVTELFRVAQETANRTYDFLPVYIEAALVYWCFCKVLFLIQARLEK 230 Query: 391 K 391 + Sbjct: 231 R 231 >gi|270488378|ref|ZP_06205452.1| ABC transporter, permease protein [Yersinia pestis KIM D27] gi|270336882|gb|EFA47659.1| ABC transporter, permease protein [Yersinia pestis KIM D27] Length = 251 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 54/216 (25%), Positives = 107/216 (49%), Gaps = 11/216 (5%) Query: 177 SFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV 236 +FP + A V S + G+ ++ T L G +L L +P ++ Sbjct: 17 TFPDGPLGGAALTVVISIMAGVASAVLGTVLGVALAMSRGVWAGILAAVLGLFRAIPVIM 76 Query: 237 LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296 LI + +F P++ + PE ++ AL+ +A++A V++G++A+ GQ Sbjct: 77 LI---FWTYFLLPIVFGVDI-------PEITTVVCALALIASAYLAHAVKAGIMAIGAGQ 126 Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356 +A ++LG + ++LPQA+R ++P +Q+++L+K++SLA VG +L + + Sbjct: 127 WQAGLSLGFNRWQTLWFIVLPQALRMMVPSFINQWISLIKDTSLAYIVGVNELTFLATQV 186 Query: 357 INQTG-QAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 N++ +E+ L +Y L + + L N LN + Sbjct: 187 NNRSMVYPMEVFLFVALVYFVLCLALDLLANGLNRR 222 >gi|157691099|ref|YP_001485561.1| amino acid ABC transporter ATP-binding protein [Bacillus pumilus SAFR-032] gi|157679857|gb|ABV61001.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Bacillus pumilus SAFR-032] Length = 225 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 55/173 (31%), Positives = 95/173 (54%), Gaps = 15/173 (8%) Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLG-QFNFIGGSTVSPEFMSLYIALSCYTAAF 280 LYIS + G+P LV++ + L+F P +G +F + + + F S AA+ Sbjct: 64 LYIS--FMRGVPILVIL---FILYFGFPYIGIEFTAVTAAIIGFSFNS---------AAY 109 Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340 IAEI R+ L +VP GQ+EAA +LGL++ + R V+LPQ++R +PPL + L+L+K SSL Sbjct: 110 IAEINRAALSSVPSGQVEAAKSLGLSYWQTMRGVILPQSVRIALPPLANIMLDLIKASSL 169 Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393 A + +L + + + + ++ IY + +++L + L + A Sbjct: 170 AAMITVPELFQQAKIVGGREFDYMTMYILVALIYWGICSVVSLLQDFLEKRYA 222 >gi|86135805|ref|ZP_01054384.1| glutamate/glutamine/aspartate/asparagine ABC transporter, permease protein [Roseobacter sp. MED193] gi|85826679|gb|EAQ46875.1| glutamate/glutamine/aspartate/asparagine ABC transporter, permease protein [Roseobacter sp. MED193] Length = 432 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 37/96 (38%), Positives = 65/96 (67%), Gaps = 1/96 (1%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+ + I ++ ++AA+IAE++R GL A+P+GQ EAA +LGL + +A RL++LPQA++ IP Sbjct: 297 FLRVVIMITLFSAAYIAEVIRGGLAALPKGQYEAADSLGLDYPQAMRLIILPQALKISIP 356 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVS-VGGTIINQT 360 + + + L K+++L + D+V + G I+ T Sbjct: 357 GIVNVAVGLFKDTTLVSVISMFDMVGMIRGPILAST 392 Score = 38.1 bits (87), Expect = 2.5, Method: Compositional matrix adjust. Identities = 28/98 (28%), Positives = 47/98 (47%), Gaps = 1/98 (1%) Query: 68 AGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAW 127 G I +G SS + L GF+ L + + + +G + GR S+ L+ W Sbjct: 200 GGMLIPEGASESAMLSSVPSRDLGGFMLNMMLGVTCVSLSVPLGIALALGRQSSMPLIKW 259 Query: 128 ICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVL 165 IC V++E R + PL+ + F+ +LS PD ++ L Sbjct: 260 ICVVFIEFVRGV-PLITLLFVASVMLSYFFPPDATVDL 296 >gi|83950491|ref|ZP_00959224.1| glutamate/glutamine/aspartate/asparagine ABC transporter, permease protein [Roseovarius nubinhibens ISM] gi|83838390|gb|EAP77686.1| glutamate/glutamine/aspartate/asparagine ABC transporter, permease protein [Roseovarius nubinhibens ISM] Length = 442 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 32/90 (35%), Positives = 60/90 (66%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I ++ + AA++AE++R GL A+P+GQ E A +LGL + +A RL+++PQA++ IP + S Sbjct: 313 IMMTLFAAAYMAEVIRGGLAALPKGQYEGADSLGLNYWQAQRLIIMPQALKISIPGIVST 372 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 ++ + K+++L +G D++ + I T Sbjct: 373 FIGIFKDTTLVSIIGLFDVIGLSNAIRADT 402 >gi|323698838|ref|ZP_08110750.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio sp. ND132] gi|323458770|gb|EGB14635.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio desulfuricans ND132] Length = 216 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 59/178 (33%), Positives = 92/178 (51%), Gaps = 18/178 (10%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 + FV+G +L R S H + K Y+S F G P LV +A+ + + P+ Sbjct: 30 IIGFVIGHLLCF--GRFSEH---RLLKRSITAYVSFFR--GTPLLVQLAIIF---YFLPL 79 Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 G F P + IALS TAAF +EI+R G ++P GQ+EAA LGLT + Sbjct: 80 FGIF--------IPSVAAAIIALSMNTAAFQSEILRGGFQSMPHGQIEAARDLGLTTWQI 131 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368 + +PQ R+ +P L ++ +++LKNS+L + DL+ + T+ + T + IE L Sbjct: 132 RLHIQIPQVFRATLPALVNESIDILKNSALISTIAVTDLMRISQTLASTTFRPIEFFL 189 Score = 40.0 bits (92), Expect = 0.59, Method: Compositional matrix adjust. Identities = 31/102 (30%), Positives = 50/102 (49%), Gaps = 18/102 (17%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV---VI 145 ++VG T W++F +I +IG L+ GR S ++L+ YV FR P LV +I Sbjct: 14 LMVGAWRTLWISFVSIIIGFVIGHLLCFGRFSEHRLLKRSITAYVSFFRGTPLLVQLAII 73 Query: 146 FFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187 F+ LP+ FG+F+ + + L+M+T A Sbjct: 74 FYF-------LPL--------FGIFIPSVAAAIIALSMNTAA 100 >gi|300693655|ref|YP_003749628.1| amino acid ABC transporter transmembrane protein [Ralstonia solanacearum PSI07] gi|299075692|emb|CBJ34989.1| amino acid ABC transporter transmembrane protein [Ralstonia solanacearum PSI07] Length = 247 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 59/206 (28%), Positives = 105/206 (50%), Gaps = 16/206 (7%) Query: 195 VLGIVLSL---FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251 VLGIVL+ A L+R + +A + T L++ + + L+ L ++F P+L Sbjct: 35 VLGIVLAFPLSVALALARLSPWRALRA-----VVTALVYAVRGVPLLMLILWVYFLVPLL 89 Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311 N G F ++ L+ Y ++ E+VR+G+ A+P+GQMEAA ALG ++ A Sbjct: 90 IGHNVSG-------FTTMLCTLAIYEGVYLCEVVRAGIEALPKGQMEAARALGHSYLGAM 142 Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ-TGQAIEIILIW 370 RLV+LPQA+ +++P + +Q+++ +K ++L + +L I N + +I + Sbjct: 143 RLVILPQALYNMLPSMLAQFVSTIKETTLGYVINVPELTFAANQINNALLSKPFQIFFLL 202 Query: 371 MFIYLSLSIMIALFMNRLNAKIALKE 396 IY + + L +IA K Sbjct: 203 AVIYFVVCWSLTRAARALERRIAAKR 228 >gi|199597030|ref|ZP_03210463.1| ABC-type amino acid transport system, permease component [Lactobacillus rhamnosus HN001] gi|199592163|gb|EDZ00237.1| ABC-type amino acid transport system, permease component [Lactobacillus rhamnosus HN001] Length = 237 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 52/190 (27%), Positives = 95/190 (50%), Gaps = 33/190 (17%) Query: 189 IFVFSFVLGIVLSLFA--TRLS--RHFHEKTGKALPLLYISTF-----------LIFGLP 233 I + SF +G++++L TR+S + + K + + Y+ F + FGLP Sbjct: 23 IALVSFAIGLIIALVTALTRISVRKGILIRIAKGIAVFYVWLFRSTPLLVQLFIVFFGLP 82 Query: 234 TLVLIAL-KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292 +L++ + + + D G F S T A+ AE R+ L+++ Sbjct: 83 SLIIPGIFPHGIKLDPAAAGIITF-----------------SLNTGAYCAETTRASLLSI 125 Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352 GQ EAA A+GL R R +++PQA+R+ IPPL++ +++L+K++SLA ++ ++ V Sbjct: 126 DSGQWEAAYAIGLPRRLVLREIIIPQALRTAIPPLSNSFISLIKDTSLAASITIVEMFQV 185 Query: 353 GGTIINQTGQ 362 I + Q Sbjct: 186 SQQIAAENYQ 195 >gi|116496268|ref|YP_808002.1| amino acid ABC transporter periplasmic protein [Lactobacillus casei ATCC 334] gi|191639796|ref|YP_001988962.1| Glutamine-binding protein / Glutamine transport system permease protein [Lactobacillus casei BL23] gi|227532736|ref|ZP_03962785.1| glutamate ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|239630724|ref|ZP_04673755.1| ABC-type amino acid transport/signal transduction system [Lactobacillus paracasei subsp. paracasei 8700:2] gi|116106418|gb|ABJ71560.1| amino acid ABC transporter membrane protein, PAAT family / amino acid ABC transporter substrate-binding protein, PAAT family [Lactobacillus casei ATCC 334] gi|190714098|emb|CAQ68104.1| Glutamine-binding protein / Glutamine transport system permease protein [Lactobacillus casei BL23] gi|227189570|gb|EEI69637.1| glutamate ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|239527007|gb|EEQ66008.1| ABC-type amino acid transport/signal transduction system [Lactobacillus paracasei subsp. paracasei 8700:2] gi|327383908|gb|AEA55384.1| Arginine/histidine ABC superfamily ATP binding cassette transporter permease [Lactobacillus casei LC2W] gi|327387089|gb|AEA58563.1| Arginine/histidine ABC superfamily ATP binding cassette transporter permease [Lactobacillus casei BD-II] Length = 486 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 57/189 (30%), Positives = 91/189 (48%), Gaps = 34/189 (17%) Query: 192 FSFVLGIVLSLFATRLSRHFHEKTG-------KALPLLYISTFLIFGLPTLVLIALKYQL 244 F+ V+GI++ L L F + LPLL ++ F+ G+P+L+ Sbjct: 301 FATVVGILVGLLGV-LPNQFARGVATTFIYIFRGLPLLVLALFIYTGVPSLI-------- 351 Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304 GS + P F++ I L+ A+ A V+ G+ AV GQMEAA +LG Sbjct: 352 --------------GSKI-PAFVAGIITLTLNEGAYTAAFVKGGIQAVDDGQMEAARSLG 396 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364 L KA R V+LPQ ++ +IP +Q++ LK++S+ +G +L G II + + Sbjct: 397 LPFGKAMRRVILPQGIKIMIPSFINQFIITLKDTSILSIIGILELTQTGKIIIARN---M 453 Query: 365 EIILIWMFI 373 E IW + Sbjct: 454 EGFKIWTMV 462 >gi|262203727|ref|YP_003274935.1| polar amino acid ABC transporter inner membrane subunit [Gordonia bronchialis DSM 43247] gi|262087074|gb|ACY23042.1| polar amino acid ABC transporter, inner membrane subunit [Gordonia bronchialis DSM 43247] Length = 582 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 40/117 (34%), Positives = 77/117 (65%), Gaps = 5/117 (4%) Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339 +I EI RSG+ +V GQ+EA+ A+G ++R++ RLV++PQ +R ++P L +Q+++L+K+SS Sbjct: 446 YIGEIFRSGIQSVDSGQLEASRAIGFSYRQSMRLVVVPQGVRRVLPALMNQFISLIKDSS 505 Query: 340 LAVAVGF----ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 L +G +L +VG + QTG + ++ +YL+L+I + +N ++ ++ Sbjct: 506 LVYFLGLLATQRELFAVGRDLNAQTGN-LSPLVAAGIVYLALTIPLTHLVNHIDNRL 561 Score = 42.7 bits (99), Expect = 0.088, Method: Compositional matrix adjust. Identities = 21/65 (32%), Positives = 36/65 (55%) Query: 84 SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143 S+ I G VNT L+ + TI+G L+ +S ++ + W R+Y ++FR +P +V Sbjct: 351 SFPDLIKTGLVNTLILSLVSGVLGTILGMLLAVAGISRSRWLRWPARIYTDIFRGLPAVV 410 Query: 144 VIFFL 148 VI + Sbjct: 411 VILIV 415 >gi|290963273|ref|YP_003494455.1| amino acid permease [Streptomyces scabiei 87.22] gi|260652799|emb|CBG75932.1| putative amino acid permease [Streptomyces scabiei 87.22] Length = 222 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 47/127 (37%), Positives = 73/127 (57%), Gaps = 1/127 (0%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + L+ YT+AF+ E +RSG+ VP GQ EAA A+GL + V+LPQA R++IPPL S Sbjct: 96 LGLTAYTSAFVCEALRSGINTVPVGQAEAARAVGLGFGQTLGFVVLPQAFRAVIPPLGSI 155 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTG-QAIEIILIWMFIYLSLSIMIALFMNRLN 389 + L KN+++A+ G A+ +I G Q I+I L + ++ L + L RL Sbjct: 156 LIALTKNTTVALVAGVAEASVRMREMIEIYGDQVIQIFLGFAAGFVVLCLPTGLLFGRLA 215 Query: 390 AKIALKE 396 ++A+ Sbjct: 216 RRLAVAR 222 >gi|289678215|ref|ZP_06499105.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. syringae FF5] Length = 154 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 33/81 (40%), Positives = 59/81 (72%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I + + +A+IAE+VR G+ A+P+GQ EAA A+GL + ++ LV+LPQA++ +IP + + Sbjct: 24 IGVILFQSAYIAEVVRGGMQAIPKGQYEAASAMGLGYWRSMGLVILPQALKMVIPGIVNT 83 Query: 331 YLNLLKNSSLAVAVGFADLVS 351 ++ L K++SL + +G DL++ Sbjct: 84 FIALFKDTSLVIIIGLFDLLN 104 >gi|218677804|ref|ZP_03525701.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium etli CIAT 894] Length = 154 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 45/132 (34%), Positives = 71/132 (53%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 ++++ I L+ + +A++ EI R + AVPRGQ EAA AL L + R V+LPQA+R +P Sbjct: 23 WVAVAIGLTLHASAYLGEIWRGSIEAVPRGQTEAAKALSLRYVSRMRDVILPQALRISLP 82 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 + L+K +SLA VGF +L G I NQ Q + + + +Y + + + Sbjct: 83 ATIGFLVQLIKGTSLASIVGFTELTRAGNIISNQIFQPLTVFGVVGILYFLMCCPLTILG 142 Query: 386 NRLNAKIALKEK 397 RL K A + Sbjct: 143 ARLERKFAASAR 154 >gi|241661638|ref|YP_002979998.1| polar amino acid ABC transporter inner membrane subunit [Ralstonia pickettii 12D] gi|240863665|gb|ACS61326.1| polar amino acid ABC transporter, inner membrane subunit [Ralstonia pickettii 12D] Length = 217 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 50/155 (32%), Positives = 84/155 (54%), Gaps = 5/155 (3%) Query: 243 QLHFDKPVLGQF--NFIGGSTVSPE---FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQM 297 QL + P+L Q F G S E + + I L+ YT+A++AE+ R + A+PRGQ Sbjct: 59 QLFQNTPLLMQMFIVFFGASMAGFEMSPWTAAAIGLTLYTSAYLAEVWRGCVEAIPRGQW 118 Query: 298 EAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII 357 EA+ +L + + + R V+LPQA+R I P + ++K +++A +GF DL +G + Sbjct: 119 EASSSLAMGYFQQMRHVVLPQAVRLSIAPTVGFSVQIVKGTAVASIIGFEDLSKLGSVLA 178 Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 N T Q I + Y +L ++L+ + L K+ Sbjct: 179 NATFQPFLIYGLVAIGYFALCWPLSLYASHLEKKL 213 >gi|332042181|gb|EGI78507.1| amino acid ABC transporter permease [Hylemonella gracilis ATCC 19624] Length = 226 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 39/125 (31%), Positives = 79/125 (63%), Gaps = 4/125 (3%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + ++ALS AA+ E + +G++++P GQMEAA + GL+ +A R V+LPQA+R +P Sbjct: 98 FATTWLALSLVLAAYAEESIWAGIVSLPDGQMEAARSTGLSWWQAMRWVVLPQALRRSVP 157 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII---LIWMFIYLSLSIMIA 382 PLT++ +++ KN++L V +++++ + +G + L ++ ++L + +M+A Sbjct: 158 PLTNRVISITKNTALGSVVALSEILNQAQAASSTSGNPTPLTLGALAYLVVFLPV-VMLA 216 Query: 383 LFMNR 387 ++ R Sbjct: 217 RWIER 221 >gi|322373784|ref|ZP_08048319.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus sp. C150] gi|321277156|gb|EFX54226.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus sp. C150] Length = 516 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 38/111 (34%), Positives = 66/111 (59%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I +S T A+++EIVR G+ AV +GQ EAA ALG +H + R ++LPQ +R+I+P ++ Sbjct: 384 IIVSINTGAYMSEIVRGGIFAVDKGQFEAATALGFSHGQTMRKIVLPQVIRNILPATGNE 443 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 ++ +K++S+ + +L G T+ QT Q + + IY L+ + Sbjct: 444 FVINIKDTSVLNVISVVELYFAGNTVATQTYQYFQTFFVIAAIYFVLTFTV 494 Score = 38.9 bits (89), Expect = 1.5, Method: Compositional matrix adjust. Identities = 24/64 (37%), Positives = 33/64 (51%), Gaps = 10/64 (15%) Query: 96 TFWLAFSGMIPATIIGTLVGAGRLS---ANKLVA-------WICRVYVEVFRNIPPLVVI 145 T ++ G + T IG ++G R + ANKLVA WI VY+EVFR P +V Sbjct: 302 TLLISIVGTVVGTFIGLMIGVYRTAPKAANKLVALLQKVFGWILNVYIEVFRGTPMIVQS 361 Query: 146 FFLY 149 +Y Sbjct: 362 MVIY 365 >gi|307132981|ref|YP_003884997.1| amino acid ABC transporter permease [Dickeya dadantii 3937] gi|306530510|gb|ADN00441.1| Amino acid ABC transporter, permease protein [Dickeya dadantii 3937] Length = 223 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 62/209 (29%), Positives = 113/209 (54%), Gaps = 17/209 (8%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 +F+ VLG+VL+L R SR L LYIS F G+P+LV + + ++F P Sbjct: 31 LFAIVLGLVLAL--VRESRFV---VVAKLVELYISLFR--GIPSLVQL---FIIYFGLPQ 80 Query: 251 L-GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309 L N + T + I S +A++AEI R+ L +V GQ EA +++G+ + Sbjct: 81 LFPSLNGLSAMTAA------IIGFSLKNSAYMAEIFRAALASVDFGQTEAGLSVGMNKAQ 134 Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369 R ++LPQAM + +P + +++L+K++S+A A+G ++L + G I ++ + E L+ Sbjct: 135 IYRRIVLPQAMLNALPATGNTFISLIKDTSVAFALGVSELFAEGKMIAAESLRFFETFLV 194 Query: 370 WMFIYLSLSIMIALFMNRLNAKIALKEKK 398 IY L ++ + ++L K++ ++ Sbjct: 195 VGLIYWMLIVVYSWLQSQLEKKLSHSRQR 223 >gi|223043619|ref|ZP_03613664.1| glutamine-binding periplasmic protein [Staphylococcus capitis SK14] gi|222443107|gb|EEE49207.1| glutamine-binding periplasmic protein [Staphylococcus capitis SK14] Length = 485 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 33/80 (41%), Positives = 61/80 (76%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IAL ++A+IAEI+R+G+ AV +GQMEAA +LGL + + + V++PQA+++I+P L ++ Sbjct: 360 IALIINSSAYIAEIIRAGINAVDKGQMEAARSLGLNYIQTMKSVIMPQAIKNILPALGNE 419 Query: 331 YLNLLKNSSLAVAVGFADLV 350 ++ L+K SS+ +G ++++ Sbjct: 420 FVTLIKESSIVSTIGVSEIM 439 Score = 40.0 bits (92), Expect = 0.61, Method: Compositional matrix adjust. Identities = 17/67 (25%), Positives = 37/67 (55%) Query: 83 SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142 + Y + + G NT ++ G+I +I+G + +++ K ++W+ +Y+E R P L Sbjct: 275 TKYGSFFIKGIKNTILISLVGVILGSILGAFIALLKINKFKPLSWLASIYIEFLRGTPML 334 Query: 143 VVIFFLY 149 V +F ++ Sbjct: 335 VQVFIVF 341 >gi|167617347|ref|ZP_02385978.1| glutamine ABC transporter permease protein [Burkholderia thailandensis Bt4] gi|257141204|ref|ZP_05589466.1| glutamine ABC transporter permease protein [Burkholderia thailandensis E264] Length = 218 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 59/208 (28%), Positives = 102/208 (49%), Gaps = 23/208 (11%) Query: 177 SFPTLTMDTNAKIFVF------SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230 + P LT +F+ F++G++ +F R + L +YI LI Sbjct: 11 ALPDLTDGVRLTVFIAFFGLAGGFLVGMIAGMF-----RAYGPAALNVLTQVYIE--LIR 63 Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290 G P +V + L+F P+L G + +A++ + A++AE+VR L+ Sbjct: 64 GTPIVVQVMF---LYFALPMLAHIRIDG-------LTAAIVAITLNSGAYLAEVVRGALL 113 Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 ++P+G EA +A+GL+ + ++ P A R +I PL +Q + LK++SL + +G +L Sbjct: 114 SIPKGVTEAGLAMGLSMPRVLVKIVGPLAFRRLIAPLGNQCIVSLKDTSLFIVIGVGELT 173 Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLS 378 G II QA+EI IYL+L+ Sbjct: 174 RKGQEIIAGNFQAVEIWTAVAAIYLALT 201 >gi|163841189|ref|YP_001625594.1| glutamine transport permease protein [Renibacterium salmoninarum ATCC 33209] gi|162954665|gb|ABY24180.1| glutamine transport permease protein [Renibacterium salmoninarum ATCC 33209] Length = 357 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 41/104 (39%), Positives = 68/104 (65%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + L+ + A++ EIVR GL +V GQ+EA+ +LGL + + R V++PQA + + P L +Q Sbjct: 234 LTLALNSGAYVTEIVRGGLQSVDPGQLEASRSLGLGYLTSMRKVVVPQAFKIMTPSLINQ 293 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374 + LLK+SSL +A+GFA+L+ G I + + + E +LI +Y Sbjct: 294 LVILLKDSSLLMAIGFAELLYQGQQIYSNSFRISETLLIVAVMY 337 >gi|187927129|ref|YP_001897616.1| polar amino acid ABC transporter inner membrane subunit [Ralstonia pickettii 12J] gi|309780168|ref|ZP_07674919.1| amino acid ABC transporter, permease protein [Ralstonia sp. 5_7_47FAA] gi|187724019|gb|ACD25184.1| polar amino acid ABC transporter, inner membrane subunit [Ralstonia pickettii 12J] gi|308920871|gb|EFP66517.1| amino acid ABC transporter, permease protein [Ralstonia sp. 5_7_47FAA] Length = 217 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 50/155 (32%), Positives = 84/155 (54%), Gaps = 5/155 (3%) Query: 243 QLHFDKPVLGQF--NFIGGSTVSPE---FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQM 297 QL + P+L Q F G S E + + I L+ YT+A++AE+ R + A+PRGQ Sbjct: 59 QLFQNTPLLMQMFIVFFGASMAGFEMSPWTAAAIGLTLYTSAYLAEVWRGCVEAIPRGQW 118 Query: 298 EAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII 357 EA+ +L + + + R V+LPQA+R I P + ++K +++A +GF DL +G + Sbjct: 119 EASSSLAMGYFQQMRHVVLPQAVRLSIAPTVGFSVQIVKGTAVASIIGFEDLSKLGSVLA 178 Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 N T Q I + Y +L ++L+ + L K+ Sbjct: 179 NATFQPFLIYGLVAIGYFALCWPLSLYASHLEKKL 213 >gi|330903629|gb|EGH34201.1| amino acid ABC transporter permease [Pseudomonas syringae pv. japonica str. M301072PT] Length = 130 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 33/81 (40%), Positives = 59/81 (72%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I + + +A+IAE+VR G+ A+P+GQ EAA A+GL + ++ LV+LPQA++ +IP + + Sbjct: 34 IGVILFQSAYIAEVVRGGMQAIPKGQYEAASAMGLGYWRSMGLVILPQALKMVIPGIVNT 93 Query: 331 YLNLLKNSSLAVAVGFADLVS 351 ++ L K++SL + +G DL++ Sbjct: 94 FIALFKDTSLVIIIGLFDLLN 114 >gi|170745094|ref|YP_001766551.1| polar amino acid ABC transporter, inner membrane subunit [Methylobacterium radiotolerans JCM 2831] gi|170658695|gb|ACB27749.1| polar amino acid ABC transporter, inner membrane subunit [Methylobacterium radiotolerans JCM 2831] Length = 227 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 52/162 (32%), Positives = 89/162 (54%), Gaps = 13/162 (8%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 +AL Y+ + I G PTL+ + + ++F P +G +SP + IAL Sbjct: 61 RALASFYV--WFIRGTPTLIQV---FIVYFGMPQIG-------VKLSPVTAGI-IALGVS 107 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 + A++AE +R+GL A+PRGQ+E+A+ALG+ R ++LPQ R I+P LT++ ++ +K Sbjct: 108 SGAYVAETIRAGLAAIPRGQVESALALGMNPRIMMVRIVLPQVFRMILPSLTNEAISAVK 167 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378 N+SL + +L +I T + + + IYL L+ Sbjct: 168 NTSLLSTITVVELTLYAQLMIATTFRPFDFYIAAALIYLGLT 209 >gi|76801537|ref|YP_326545.1| glutamine/glutamate/polar amino acids ABC transporter permease [Natronomonas pharaonis DSM 2160] gi|76557402|emb|CAI48979.1| ABC-type transport system permease protein II 1 (probable substrates glutamine/glutamate/polar amino acids) [Natronomonas pharaonis DSM 2160] Length = 262 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 53/180 (29%), Positives = 97/180 (53%), Gaps = 14/180 (7%) Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIG---GSTVSPEF-------MSLYIALSCYT 277 L+ G P +VL+ L + P G F G+T PEF + +AL + Sbjct: 79 LLRGTPIVVLMVLFF-FGLPLPDPGDITFSSITLGNTTIPEFSVGFEAFFAAMLALGLRS 137 Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 AA+ +++ R + ++ GQ+ AA ++GL+ +A R V++PQA+R +P +++ +LK+ Sbjct: 138 AAYQSQVFRGAIQSIDEGQVAAARSVGLSKYEAIRHVVVPQALRRSVPGFQNEFTIVLKD 197 Query: 338 SSLAVAVGFADLVSVGGTIINQTGQA---IEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394 +S+A A+G A+L++ G + Q GQ+ +E+IL IY L+ ++ L+ A+ Sbjct: 198 TSIAFAIGLAELLTRGYDLFTQPGQSTAVLEVILAVSLIYFVLTFTTNRALDALSDYYAI 257 >gi|158313074|ref|YP_001505582.1| polar amino acid ABC transporter, inner membrane subunit [Frankia sp. EAN1pec] gi|158108479|gb|ABW10676.1| polar amino acid ABC transporter, inner membrane subunit [Frankia sp. EAN1pec] Length = 290 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 55/169 (32%), Positives = 90/169 (53%), Gaps = 16/169 (9%) Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287 ++ GLP L+LI Y P LG N F +L I L+ Y A ++EI R+ Sbjct: 109 MLRGLPLLMLIFFAY---LGLPQLG-INL-------SAFWALVIGLTAYNGAVLSEIFRA 157 Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347 G+ ++ +GQ EAA ALGL + L+ PQA+R + P L SQ + LLK++SL +G+ Sbjct: 158 GIQSIDKGQTEAAAALGLRGTQIFTLIQFPQAVRRMSPTLVSQLVTLLKDTSLGFVIGYT 217 Query: 348 DLVSVGGTIINQTGQ----AIEIILIWMFIYLSLSI-MIALFMNRLNAK 391 +L+ G + + G + +L M+I ++ S+ + A ++ R A+ Sbjct: 218 ELLRQGRSAVEFLGGRYALPVYTVLAVMYIIVNFSLSLTARWLERRQAR 266 Score = 39.7 bits (91), Expect = 0.91, Method: Compositional matrix adjust. Identities = 21/58 (36%), Positives = 33/58 (56%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 G ++T A +GM+ A +GT + R S +LV+ VE+ R +P L++IFF Y Sbjct: 66 GLLDTLRAAATGMVLAVAVGTALAFARQSNRRLVSIPATAVVEMLRGLPLLMLIFFAY 123 >gi|238917322|ref|YP_002930839.1| polar amino acid transport system substrate-binding protein [Eubacterium eligens ATCC 27750] gi|238872682|gb|ACR72392.1| polar amino acid transport system substrate-binding protein [Eubacterium eligens ATCC 27750] Length = 510 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 35/132 (26%), Positives = 78/132 (59%), Gaps = 1/132 (0%) Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320 T + F ++ I + AA+ AEI R G+ ++P+GQ EAA LG + + ++ PQ + Sbjct: 376 TATYRFYAVIIGFALNYAAYFAEIYRGGIESIPKGQYEAAEVLGYSKVQTFWKIIFPQMV 435 Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380 + ++PP+T++ + L+K++SLA A+ + ++ ++ + T + + + +F Y+ + + Sbjct: 436 KRVLPPVTNEVITLVKDTSLAFALAYTEMFTLAKQVAASTASIMPLFIAGLFYYI-FNFL 494 Query: 381 IALFMNRLNAKI 392 +A+ M +L ++ Sbjct: 495 VAMVMEKLEKRM 506 >gi|145632443|ref|ZP_01788178.1| ABC-type amino acid transport system permease component [Haemophilus influenzae 3655] gi|145634237|ref|ZP_01789948.1| ABC-type amino acid transport system permease component [Haemophilus influenzae PittAA] gi|229846111|ref|ZP_04466223.1| ABC-type amino acid transport system permease component [Haemophilus influenzae 7P49H1] gi|144987350|gb|EDJ93880.1| ABC-type amino acid transport system permease component [Haemophilus influenzae 3655] gi|145268681|gb|EDK08674.1| ABC-type amino acid transport system permease component [Haemophilus influenzae PittAA] gi|229811115|gb|EEP46832.1| ABC-type amino acid transport system permease component [Haemophilus influenzae 7P49H1] Length = 238 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 62/205 (30%), Positives = 108/205 (52%), Gaps = 19/205 (9%) Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249 F ++ +++++ T S + K +AL +YIS +I G P LV I + + + P Sbjct: 45 FFCGLLIAVIVAVIRTLPSPNLPLKLLQALCRVYIS--IIRGTPMLVQI---FIIFYGLP 99 Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309 +G T+ P F + IA S A+ AE VR+ +IA+P+GQ EA+ A+G+ +R+ Sbjct: 100 EVG-------ITLEP-FPTAIIAFSINIGAYAAETVRASIIAIPKGQWEASYAIGMNYRQ 151 Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369 A ++PQA+R +P L++ +++ +K++SLA V +L V N T E ILI Sbjct: 152 AFIRTIMPQALRISVPSLSNTFISTVKDTSLASLVLVTELFRVAQ---NITAANYEFILI 208 Query: 370 W---MFIYLSLSIMIALFMNRLNAK 391 + IY +++ +RL + Sbjct: 209 YSEAALIYWIFCFVLSFLQDRLEIR 233 >gi|124022918|ref|YP_001017225.1| amino acid ABC transporter permease [Prochlorococcus marinus str. MIT 9303] gi|123963204|gb|ABM77960.1| ABC transporter for amino acids, membrane component [Prochlorococcus marinus str. MIT 9303] Length = 342 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 41/117 (35%), Positives = 72/117 (61%), Gaps = 3/117 (2%) Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339 +IAE VR GL A+PR Q EAA LGL+ ++ +LV+LPQA+R+ +P LT+Q + LL+N+S Sbjct: 217 YIAEDVRGGLQAIPRTQREAAAVLGLSPKQMIQLVVLPQALRTALPALTNQAVGLLQNTS 276 Query: 340 LAVAVGFADLVSVGGTIINQT---GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393 L +G +L+ + +++ G+ +E+ + +Y + +AL L +++ Sbjct: 277 LMAILGLVELLGISRSLLANPDFIGRYLEVYVWLAGVYWLVCTAMALLARHLEHQLS 333 >gi|118589036|ref|ZP_01546443.1| amino acid ABC transporter, permease protein [Stappia aggregata IAM 12614] gi|118438365|gb|EAV44999.1| amino acid ABC transporter, permease protein [Stappia aggregata IAM 12614] Length = 367 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 33/87 (37%), Positives = 60/87 (68%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 + + + I ++ ++AA++AE+VR GL A+P+GQ E A+ALGL L++LPQA++ +I Sbjct: 229 KLLRVLIGVTLFSAAYMAEVVRGGLQAIPKGQYEGAMALGLRFWPMMYLIILPQALKLVI 288 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVS 351 P + + ++ L K+++L + VG DL+ Sbjct: 289 PGIVNTFIGLFKDTTLVLIVGMFDLLG 315 >gi|89056451|ref|YP_511902.1| amino acid ABC transporter permease [Jannaschia sp. CCS1] gi|88866000|gb|ABD56877.1| amino acid ABC transporter membrane protein 1, PAAT family [Jannaschia sp. CCS1] Length = 251 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 36/124 (29%), Positives = 80/124 (64%), Gaps = 3/124 (2%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + L+ + + I+EI R+G+ AV GQ EAA ++G++ + R ++LPQ++R ++PP+ + Sbjct: 127 LTLAVFHSVLISEIFRAGINAVATGQWEAAKSIGMSQGQTYRYIILPQSVRFMLPPMFGE 186 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL---FMNR 387 ++L+K+S++ + A+L ++G II+ T + EI +Y+++++++++ F+ R Sbjct: 187 VVHLIKSSAIVSVIAVAELTTIGRNIISDTFLSFEIWFTVALVYMAITLILSVGVSFLER 246 Query: 388 LNAK 391 A+ Sbjct: 247 RYAQ 250 >gi|38347925|ref|NP_941174.1| glutamine ABC transporter permease protein [Serratia marcescens] gi|152973763|ref|YP_001338802.1| glutamine ABC transporter permease protein [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|38259402|emb|CAE51629.1| membrane transport system permease protein [Serratia marcescens] gi|150958545|gb|ABR80572.1| hypothetical protein KPN_pKPN5p08192 [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] Length = 218 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 38/116 (32%), Positives = 73/116 (62%) Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 + A+IAEI R ++++ RG EA++A+GL+ R V++P A+R +IP L +Q++ +K Sbjct: 100 SGAYIAEITRGAILSINRGFKEASLAMGLSQRATLWHVIMPLALRRMIPALGNQWIISIK 159 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 ++SL + +G A+L G II +A+E+ IYL++++ ++ + +L +I Sbjct: 160 DTSLFIVIGVAELTRQGQEIIAGNFRALEVWTAVALIYLAVTLCLSFLLKQLEKRI 215 >gi|327438995|dbj|BAK15360.1| ABC-type amino acid transport system, permease component [Solibacillus silvestris StLB046] Length = 219 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 39/119 (32%), Positives = 71/119 (59%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I S T A+ +E +R+ ++A+P+GQ EAA +LG+T+ + R V+ PQ +R +PP+ + Sbjct: 94 ITFSLNTGAYASESIRASILAIPKGQWEAAESLGMTYWQMMRRVIAPQTVRISLPPVAND 153 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 +++++K +SL ++ ADL VG I +T + + I + IYL ++ + RL Sbjct: 154 FIDMVKGTSLVASITLADLFMVGQQITARTYEPLMIYSLCAVIYLIFISVLMVIQGRLE 212 >gi|154253426|ref|YP_001414250.1| polar amino acid ABC transporter inner membrane subunit [Parvibaculum lavamentivorans DS-1] gi|154157376|gb|ABS64593.1| polar amino acid ABC transporter, inner membrane subunit [Parvibaculum lavamentivorans DS-1] Length = 369 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 36/91 (39%), Positives = 64/91 (70%), Gaps = 1/91 (1%) Query: 262 VSPE-FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320 V+P+ + + ++ +++A++AE+VR GL A+P GQ EAA A+GLT+ +A V+LPQA+ Sbjct: 227 VNPDNLLRCLVGVALFSSAYMAEVVRGGLQAIPAGQYEAARAVGLTYWQAMGQVVLPQAL 286 Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 R +IP + + ++ L K+++L + VG DL+ Sbjct: 287 RHVIPGIVNTFIGLFKDTTLVLIVGIFDLLG 317 >gi|322386191|ref|ZP_08059824.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus cristatus ATCC 51100] gi|321269771|gb|EFX52698.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus cristatus ATCC 51100] Length = 228 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 56/166 (33%), Positives = 88/166 (53%), Gaps = 6/166 (3%) Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP-EFMSLYIALSCY---TAAFIAEIVRSG 288 P ++LI Y L +L QF GS V +F LY A Y T ++EI+RS Sbjct: 64 PPILLILFFYSLF--PSLLNQFFKSLGSQVDVFKFNPLYYAFIIYSLMTTGSLSEILRSA 121 Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348 ++ V +GQ+EAA A+GLT+ +A R ++ PQA+RS +P L + +NL+K +SL + D Sbjct: 122 ILTVDKGQLEAAQAIGLTNFQAYRRIVFPQALRSALPNLANLVINLVKGTSLVFVMTVKD 181 Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394 + ++ + + Q E L+ IYL + +I L + AL Sbjct: 182 ITALAKVEASHSYQYSESYLVIFVIYLIICGLIQWMFRSLEKRYAL 227 >gi|303248477|ref|ZP_07334735.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio fructosovorans JJ] gi|302490097|gb|EFL50017.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio fructosovorans JJ] Length = 253 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 47/150 (31%), Positives = 79/150 (52%), Gaps = 25/150 (16%) Query: 222 LYISTFLIFGLPTLVLIALKY-----QLHFDKP-VLGQFNFIGGSTVSPEFMSLYIALSC 275 LY+ F G P LV I + Y +H D P V+G + L+ Sbjct: 87 LYVGAFR--GTPLLVQILIFYFCVGVVIHVDSPYVIGT-----------------VTLAF 127 Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335 ++ A+I+E+VR+G+ ++ GQ E A++ GLTHR+ V+ PQA+R I+PP+T Q+++ + Sbjct: 128 FSGAYISEMVRAGVESIDVGQWETALSSGLTHRQTLFYVIFPQAIRRIVPPVTGQFVSCI 187 Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIE 365 K+SSL + +L + + T + E Sbjct: 188 KDSSLLSVISVRELTKAAEVVNSTTYKTFE 217 >gi|261400795|ref|ZP_05986920.1| amino acid ABC transporter, permease protein [Neisseria lactamica ATCC 23970] gi|269209397|gb|EEZ75852.1| amino acid ABC transporter, permease protein [Neisseria lactamica ATCC 23970] Length = 219 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 58/181 (32%), Positives = 95/181 (52%), Gaps = 16/181 (8%) Query: 228 LIFGLPTLVLIALKY-----------QLHFDKPVLGQ--FNFIGGSTVSPE---FMSLYI 271 L+FGLP V+ A + +L + P+L Q F + G + + F I Sbjct: 32 LLFGLPVAVVTAYRIRPFYALARAYIELSRNTPLLIQLFFLYYGLPKMGIKWDGFTCGVI 91 Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 AL A+++AE VR+G++AVP+GQ+EA A+GL+ + R V LPQA P + + Sbjct: 92 ALVFLGASYMAEAVRAGILAVPKGQVEAGKAIGLSRFQVFRYVELPQAWAVAFPAVAANI 151 Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 L L+K +S+ AVG A+L+ V +I + E + + YL + + ++L + RL + Sbjct: 152 LFLMKETSVISAVGIAELLFVTKDVIGMDYKTNEALFLLFAAYLIILLPVSLLVRRLENR 211 Query: 392 I 392 I Sbjct: 212 I 212 >gi|222106503|ref|YP_002547294.1| ABC transporter membrane spanning protein (amino acid) [Agrobacterium vitis S4] gi|221737682|gb|ACM38578.1| ABC transporter membrane spanning protein (amino acid) [Agrobacterium vitis S4] Length = 216 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 46/133 (34%), Positives = 75/133 (56%), Gaps = 7/133 (5%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 ++++ IA + + +AF+ +I R G+ AVP+GQ EAA ALGL + + V+LPQA + +P Sbjct: 85 WIAVAIAFTLHASAFLGDIWRGGIQAVPKGQTEAAKALGLHYGSIMKDVVLPQAFKVSLP 144 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 + L+K +SLA VGF +L G + NQT + + + I IY + ++L+ Sbjct: 145 ATIGFLVQLIKGTSLAAIVGFVELSRAGQIVSNQTFRPLTVFAIVGIIYFLICWPLSLWG 204 Query: 386 NRLNAKIALKEKK 398 R KEK+ Sbjct: 205 AR-------KEKR 210 >gi|330878513|gb|EGH12662.1| putative ABC transporter ATP-binding protein [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 506 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 62/209 (29%), Positives = 106/209 (50%), Gaps = 14/209 (6%) Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249 +V S VLG +L+L A + S KA YI +L LP LVL+ Y L P Sbjct: 32 WVISIVLGFILAL-AKQSSVPLINLPAKA----YI--WLFRSLPLLVLLIFVYNLPQAFP 84 Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309 + ++ F + IA+ A++AEI R GL+++ +GQ EAA ALGL Sbjct: 85 A-------TSAVLANPFWAGLIAMVMCETAYVAEIHRGGLLSIAKGQTEAARALGLRFVG 137 Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369 +++PQA+R +P LT++Y++++K SSL + +++ VG + +Q +E + Sbjct: 138 TQWRIVIPQALRVALPSLTNEYISIVKLSSLVSVISLTEILMVGQRLYSQNFLVMETMAA 197 Query: 370 WMFIYLSLSIMIALFMNRLNAKIALKEKK 398 F Y+ + + + RL + + ++K Sbjct: 198 VAFYYVLVVTVFDFLLKRLERHLDVTQRK 226 >gi|328555067|gb|AEB25559.1| YtmL [Bacillus amyloliquefaciens TA208] gi|328913424|gb|AEB65020.1| polar amino acid transport system permease protein [Bacillus amyloliquefaciens LL3] Length = 240 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 53/183 (28%), Positives = 93/183 (50%), Gaps = 12/183 (6%) Query: 219 LPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY-- 276 L LYIS F G P +V + + + + P L I S + P LY A++ Y Sbjct: 56 LAKLYISFFR--GTPIMVQL---FIVFYGIPALTALGGIDTSKMDP----LYAAIATYAL 106 Query: 277 -TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335 +AA AEI+R G+ +V GQ EAA+++GL + R ++LPQA+ P + + + L Sbjct: 107 SSAARAAEIIRGGVNSVDAGQTEAALSIGLNGGQTFRRIILPQALLQAFPNIGNMVIGFL 166 Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395 K++SLA ++G D+ G T+I + ++E+ + +Y + +++ +I Sbjct: 167 KDTSLAFSIGVMDMSGRGQTLITSSNHSLEVYISLSVLYYAAALLFECVFRWAEKRIKKD 226 Query: 396 EKK 398 E + Sbjct: 227 ETR 229 >gi|332163538|ref|YP_004300115.1| putative amino acid transport system permease [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|318608044|emb|CBY29542.1| glutamate transport membrane-spanning protein [Yersinia enterocolitica subsp. palearctica Y11] gi|325667768|gb|ADZ44412.1| putative amino acid transport system permease [Yersinia enterocolitica subsp. palearctica 105.5R(r)] Length = 251 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 53/216 (24%), Positives = 106/216 (49%), Gaps = 11/216 (5%) Query: 177 SFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV 236 +FP + A + S + G+ ++ T L G +L +P ++ Sbjct: 17 TFPDGPLGGAALTLLISLLAGVASAILGTALGVALAMSRGVWAAVLAAVLGFFRAIPVIM 76 Query: 237 LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296 LI + +F P++ + PE ++ AL+ +A++A V++G++A+ GQ Sbjct: 77 LI---FWTYFLLPIVFGVDI-------PEITTVVCALALIASAYLAHAVKAGIVAIGAGQ 126 Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356 +A ++LG + V+LPQA+R ++P +Q+++L+K++SLA VG +L + + Sbjct: 127 WQAGLSLGFNRWQVLWFVVLPQALRMMVPSFINQWISLIKDTSLAYIVGVNELTFLATQV 186 Query: 357 INQTG-QAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 N++ +E+ L +Y L + + L N LN + Sbjct: 187 NNRSMVYPMEVFLFVALVYFVLCLTLDLLANGLNRR 222 >gi|310643432|ref|YP_003948190.1| amino acid abc-type transporter, permease component [Paenibacillus polymyxa SC2] gi|309248382|gb|ADO57949.1| Amino acid ABC-type transporter, permease component [Paenibacillus polymyxa SC2] Length = 222 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 39/135 (28%), Positives = 77/135 (57%), Gaps = 1/135 (0%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G T+ P F++ I + A+ +EI+R+ +I++ GQ EA +LG+T + R ++LPQ Sbjct: 84 GITLDP-FIASVIGFTLSVGAYSSEIMRAAIISIQEGQWEAGYSLGMTRWQVLRRIVLPQ 142 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378 A R +PPL + +++L+K++SLA + + ++ I+ T + + + IYL S Sbjct: 143 ASRVSVPPLANSFISLVKDTSLAATITYVEMFRTANQIVATTYEPLLVYTEAGVIYLLFS 202 Query: 379 IMIALFMNRLNAKIA 393 ++ + N L +++ Sbjct: 203 TILTVLQNYLEKRLS 217 >gi|184155297|ref|YP_001843637.1| ABC transporter permease component [Lactobacillus fermentum IFO 3956] gi|183226641|dbj|BAG27157.1| ABC transporter permease component [Lactobacillus fermentum IFO 3956] Length = 223 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 58/210 (27%), Positives = 105/210 (50%), Gaps = 32/210 (15%) Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY-----QLHF 246 F ++G V + T SR + + LY+ F I +PT+VL+ L Y QLH Sbjct: 35 FGLIVGTVFGVLRTTKSRVL-----RFILRLYLEIFRI--IPTVVLLFLAYYILPRQLHI 87 Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306 + P ++M++ +A S + AA ++IVR + +VP+ Q E+ +A+GLT Sbjct: 88 NMP--------------ADWMAV-LAFSLWVAAEFSDIVRGAIQSVPQHQRESGLAIGLT 132 Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 + R +LLPQAM+ +P + ++K +SL + + D+++VG II Sbjct: 133 RFQLFRYILLPQAMKLEVPAAINLATRVVKTTSLLMIISIMDVINVGQQIIEANNSTYPT 192 Query: 367 ILIWM-----FIYLSLSIMIALFMNRLNAK 391 + W+ F+Y + +++L+ +L A+ Sbjct: 193 GVFWVYGLIFFLYFIVDYLLSLWARKLTAR 222 Score = 40.4 bits (93), Expect = 0.44, Method: Compositional matrix adjust. Identities = 20/68 (29%), Positives = 41/68 (60%) Query: 82 DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141 + S + ++ G + W+A + I+GT+ G R + ++++ +I R+Y+E+FR IP Sbjct: 11 EGSNFSRLMGGLWVSAWIAVVSLFFGLIVGTVFGVLRTTKSRVLRFILRLYLEIFRIIPT 70 Query: 142 LVVIFFLY 149 +V++F Y Sbjct: 71 VVLLFLAY 78 >gi|330941854|gb|EGH44591.1| amino acid ABC transporter permease [Pseudomonas syringae pv. pisi str. 1704B] Length = 117 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 41/114 (35%), Positives = 67/114 (58%) Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340 ++EIVR L A+PRGQ+EA A+GL ++ R VLLPQAMR I+P + ++K S+L Sbjct: 3 VSEIVRGALQAIPRGQLEAGKAIGLRFNQSLRYVLLPQAMRQILPTWVNSSTEIVKASTL 62 Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394 +G A+L+ +I +T +E L F++ ++ I L ++ ++AL Sbjct: 63 LSVIGVAELLLSTQQVIARTFMTLEFYLFAGFLFFLINYAIELLGRQIEKRVAL 116 >gi|323339948|ref|ZP_08080215.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus ruminis ATCC 25644] gi|323092590|gb|EFZ35195.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus ruminis ATCC 25644] Length = 482 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 50/158 (31%), Positives = 79/158 (50%), Gaps = 23/158 (14%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 + LPL+ ++ F+ G+P+L GS + P F++ I L Sbjct: 328 RGLPLIVLALFIYNGIPSLT----------------------GSKI-PAFVAGVITLMLN 364 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 A+IA V+ G+ AV GQMEAA +LGL KA R V+LPQ ++ +IP +Q++ LK Sbjct: 365 EGAYIAAFVKGGIEAVDSGQMEAARSLGLPFGKAMRKVVLPQGIKIMIPSFINQFIITLK 424 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374 ++S+ +G +L G II + + + I IY Sbjct: 425 DTSILSVIGLLELTQTGKIIIARNLEGFRVWTIVAVIY 462 >gi|301067875|ref|YP_003789898.1| amino acid ABC transporter/signal transduction system periplasmic protein [Lactobacillus casei str. Zhang] gi|300440283|gb|ADK20049.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Lactobacillus casei str. Zhang] Length = 474 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 57/189 (30%), Positives = 91/189 (48%), Gaps = 34/189 (17%) Query: 192 FSFVLGIVLSLFATRLSRHFHEKTG-------KALPLLYISTFLIFGLPTLVLIALKYQL 244 F+ V+GI++ L L F + LPLL ++ F+ G+P+L+ Sbjct: 289 FATVVGILVGLLGV-LPNQFARGVATTFIYIFRGLPLLVLALFIYTGVPSLI-------- 339 Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304 GS + P F++ I L+ A+ A V+ G+ AV GQMEAA +LG Sbjct: 340 --------------GSKI-PAFVAGIITLTLNEGAYTAAFVKGGIQAVDDGQMEAARSLG 384 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364 L KA R V+LPQ ++ +IP +Q++ LK++S+ +G +L G II + + Sbjct: 385 LPFGKAMRRVILPQGIKIMIPSFINQFIITLKDTSILSIIGILELTQTGKIIIARN---M 441 Query: 365 EIILIWMFI 373 E IW + Sbjct: 442 EGFKIWTMV 450 >gi|239820264|ref|YP_002947449.1| polar amino acid ABC transporter, inner membrane subunit [Variovorax paradoxus S110] gi|239805117|gb|ACS22183.1| polar amino acid ABC transporter, inner membrane subunit [Variovorax paradoxus S110] Length = 264 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 44/123 (35%), Positives = 71/123 (57%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + L+ Y AF +EIVR G+I++ GQ EA ALG+T + R +LLPQA + ++PPL SQ Sbjct: 139 LCLTLYGGAFYSEIVRGGIISIEAGQTEAGKALGMTRLQLLRRILLPQAFKKMVPPLMSQ 198 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 + LKN+SL + DL+ G I + T + +E+ Y ++ + I ++ R+ Sbjct: 199 SIMQLKNTSLLSVLAVPDLLYQGQVIAHDTYRPLELYTFIAIAYFAVLLPITIWAKRMEY 258 Query: 391 KIA 393 +A Sbjct: 259 GVA 261 >gi|183597013|ref|ZP_02958506.1| hypothetical protein PROSTU_00245 [Providencia stuartii ATCC 25827] gi|188023669|gb|EDU61709.1| hypothetical protein PROSTU_00245 [Providencia stuartii ATCC 25827] Length = 250 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 64/207 (30%), Positives = 110/207 (53%), Gaps = 23/207 (11%) Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLL---YISTF-----LIFGLPTLVLIALKYQLHFD 247 L +++SL A +S F G AL +L +++ F +P ++LI Y F Sbjct: 28 LTLIISLVAGAMSIVFGTLGGVALAMLRGFWMNLFAAVLGFFRAIPVIMLIFWTY--FFL 85 Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307 VLG T P S+ AL+ T+A++A V++G++A+ +GQ +A ++LG + Sbjct: 86 PVVLG--------TEIPGIASVICALALITSAYLAHAVKAGILAIGKGQWQAGLSLGFSR 137 Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN-QTGQAIEI 366 + ++LPQA+R ++P +Q++ L+K++SLA VG A+L + + N + +EI Sbjct: 138 WQVLWQIVLPQALRMMVPSFINQWVALIKDTSLAYIVGVAELSFLATQVNNREMVYPLEI 197 Query: 367 ILIWMFIY----LSLSIMIALFMNRLN 389 L FIY L+L I+ L RL+ Sbjct: 198 FLFVAFIYFVICLTLEIVANLIAKRLS 224 >gi|315122482|ref|YP_004062971.1| amino acid ABC transporter (permease) [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495884|gb|ADR52483.1| amino acid ABC transporter (permease) [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 239 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 40/132 (30%), Positives = 77/132 (58%), Gaps = 10/132 (7%) Query: 271 IALSCYTA----------AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320 I L C++A A+I+EI+RS ++++P+GQ +AA ++GLT ++ R ++LPQ + Sbjct: 85 IVLDCFSAIVISFTLNFSAYISEIIRSSILSIPKGQWDAAYSIGLTRQQTIRHIILPQIV 144 Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380 PL+S+++++LK++SLA V ++ I++ T Q + I IYL L+ Sbjct: 145 VISAAPLSSEFISILKSTSLASTVTLPEIFQTAQRIVSTTYQPLIIYCEIAIIYLILTSF 204 Query: 381 IALFMNRLNAKI 392 + ++ +K+ Sbjct: 205 CYIIQMKIESKL 216 >gi|261217290|ref|ZP_05931571.1| polar amino acid ABC transporter [Brucella ceti M13/05/1] gi|261320161|ref|ZP_05959358.1| polar amino acid ABC transporter [Brucella ceti M644/93/1] gi|260922379|gb|EEX88947.1| polar amino acid ABC transporter [Brucella ceti M13/05/1] gi|261292851|gb|EEX96347.1| polar amino acid ABC transporter [Brucella ceti M644/93/1] Length = 250 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 40/126 (31%), Positives = 76/126 (60%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + I + A+ +EI+R+ + +VP+GQ EAA +G++ R+A +LPQA R+ +P Sbjct: 113 FPAALIGFTLNIGAYSSEIIRAVISSVPKGQWEAAYFIGMSWRQALIRTILPQATRTAVP 172 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PL++ +++L+K++SLA A+ +L I+ T + + + + IYL+LS +++ Sbjct: 173 PLSNTFISLIKDTSLAAAITVPELFQSAQRIVATTYEPLILYIEAALIYLALSSILSALQ 232 Query: 386 NRLNAK 391 RL + Sbjct: 233 VRLERR 238 >gi|170748629|ref|YP_001754889.1| polar amino acid ABC transporter, inner membrane subunit [Methylobacterium radiotolerans JCM 2831] gi|170655151|gb|ACB24206.1| polar amino acid ABC transporter, inner membrane subunit [Methylobacterium radiotolerans JCM 2831] Length = 245 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 45/125 (36%), Positives = 71/125 (56%), Gaps = 2/125 (1%) Query: 259 GSTVSPEFMSL--YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316 G+ P + SL + L+ Y A+IAE +R+G+ AV Q EAA+ALGL +A R ++L Sbjct: 103 GALRWPAYESLAGFCGLALYAGAYIAEELRAGIGAVRSTQREAALALGLAPVQAFRHIVL 162 Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376 PQA+R P+ QYLN LKN+SL + +G A+L + +T + + I +Y+ Sbjct: 163 PQALRVAWLPIVGQYLNTLKNTSLTMTIGLAELSYASRQVETETFETFQAFGIATLLYVG 222 Query: 377 LSIMI 381 + + Sbjct: 223 AAAAV 227 >gi|139437313|ref|ZP_01771473.1| Hypothetical protein COLAER_00452 [Collinsella aerofaciens ATCC 25986] gi|133776960|gb|EBA40780.1| Hypothetical protein COLAER_00452 [Collinsella aerofaciens ATCC 25986] Length = 436 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 40/122 (32%), Positives = 78/122 (63%), Gaps = 1/122 (0%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I ++ ++A++ EI R+G+ ++P+GQ EAA +LG+ + V++PQ R+++P LTS+ Sbjct: 287 IVMAMNSSAYLCEIFRAGIQSIPKGQNEAARSLGMNAFQTLLYVMIPQTFRNVLPTLTSE 346 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++ L K++SL AVG ++V TI+ TG ++ +F YL +++ +A ++ L A Sbjct: 347 FILLYKDTSLLAAVGVVEIVMNARTIVATTGSITPYVVAALF-YLVITLPLARLVSGLEA 405 Query: 391 KI 392 ++ Sbjct: 406 RL 407 >gi|305432078|ref|ZP_07401245.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Campylobacter coli JV20] gi|304445162|gb|EFM37808.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Campylobacter coli JV20] Length = 272 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 40/119 (33%), Positives = 73/119 (61%) Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 LS ++AA+++EI R+G+++VP Q+E+A ALGL+ R+ ++ PQA+++I+ P++ Q Sbjct: 151 LSMFSAAYLSEIFRAGILSVPIIQIESARALGLSERQIFLYIIFPQAIKNILAPISGQLA 210 Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 NL+K+SSL + +L + + +E ++ F YL L++ I +F L K Sbjct: 211 NLIKDSSLLSVIALNELTQSIQEVNSYIFATLEGYIVLAFAYLILTLPIGVFSRYLERK 269 >gi|228478305|ref|ZP_04062913.1| ABC transporter, permease protein [Streptococcus salivarius SK126] gi|312863121|ref|ZP_07723359.1| ABC transporter, permease protein [Streptococcus vestibularis F0396] gi|322517165|ref|ZP_08070048.1| polar amino acid uptake ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus vestibularis ATCC 49124] gi|228249984|gb|EEK09254.1| ABC transporter, permease protein [Streptococcus salivarius SK126] gi|311100657|gb|EFQ58862.1| ABC transporter, permease protein [Streptococcus vestibularis F0396] gi|322124224|gb|EFX95740.1| polar amino acid uptake ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus vestibularis ATCC 49124] Length = 226 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 53/161 (32%), Positives = 93/161 (57%), Gaps = 15/161 (9%) Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL-HFDKPV 250 F +LG+++SL ++ K + L LY+ F G P +V I + + L H + P Sbjct: 30 FGTILGVLVSL-----AKRSGIKPLEWLVSLYVWVFR--GTPMVVQIMIAFNLIHMNLPT 82 Query: 251 LGQFNFIGG--STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308 + QF + S + P I LS + A+I+E VR+G+ ++P+GQ+EAA +LG+ Sbjct: 83 V-QFGILNLDLSRIVPGI----IVLSLNSGAYISESVRAGIESIPKGQVEAAYSLGIRPW 137 Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349 R V+LPQA+++I+P L ++++ ++K+SSL +G +L Sbjct: 138 NTMRYVVLPQAIKNILPALGNEFVTIIKDSSLLQTIGVMEL 178 >gi|269956044|ref|YP_003325833.1| polar amino acid ABC transporter inner membrane subunit [Xylanimonas cellulosilytica DSM 15894] gi|269304725|gb|ACZ30275.1| polar amino acid ABC transporter, inner membrane subunit [Xylanimonas cellulosilytica DSM 15894] Length = 294 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 36/119 (30%), Positives = 76/119 (63%) Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 A IAE+VRSG++ +PRGQ EA ++LGLT + R + LPQA+ +++P + SQ + +LK Sbjct: 151 NGAVIAELVRSGVVNLPRGQSEAGLSLGLTQGQTLRSIQLPQALIAMLPAVISQLVVVLK 210 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395 +S+L +G+ DL+ + + G ++ + + +++ +++ ++ +RL+ +++ + Sbjct: 211 DSALGQLIGYTDLLRSAQVLASGGGNPLQTLFVVAVLFILVNMGLSWVAHRLSRRLSSR 269 Score = 40.8 bits (94), Expect = 0.39, Method: Compositional matrix adjust. Identities = 30/86 (34%), Positives = 46/86 (53%), Gaps = 3/86 (3%) Query: 64 LSERAGFEIDQGIVPYTSDS-SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN 122 L++R ++D G+ +D+ ++ L G NT A + A + G L G GRLS Sbjct: 40 LAQRG--QLDAGLWRTATDARAWEFYYLPGLRNTLQAAAVATVGAVLFGVLFGMGRLSHL 97 Query: 123 KLVAWICRVYVEVFRNIPPLVVIFFL 148 + V WI V VE FR +P L+++ FL Sbjct: 98 RAVRWISSVVVEFFRAVPVLLMMVFL 123 >gi|126737044|ref|ZP_01752779.1| ABC glutamate/glutamine/aspartate/asparagine transporter, inner membrane subunit BztC [Roseobacter sp. SK209-2-6] gi|126721629|gb|EBA18332.1| ABC glutamate/glutamine/aspartate/asparagine transporter, inner membrane subunit BztC [Roseobacter sp. SK209-2-6] Length = 432 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 44/136 (32%), Positives = 80/136 (58%), Gaps = 4/136 (2%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+ + I ++ ++AA+IAE++R GL A+P GQ EAA +LGL + +A RL++LPQA++ IP Sbjct: 297 FLRVVIMITLFSAAYIAEVIRGGLAALPTGQYEAADSLGLDYPQAMRLIILPQALKISIP 356 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVS-VGGTIINQT---GQAIEIILIWMFIYLSLSIMI 381 + + + L K+++L + DLV + G I+ T G E++ F++ + I Sbjct: 357 GIVNVAVGLFKDTTLVSVISMFDLVGMIRGPILASTEWNGVYWELLGFAAFLFFIVCYGI 416 Query: 382 ALFMNRLNAKIALKEK 397 + + L ++A + Sbjct: 417 SQYSQWLERRLATGHR 432 Score = 39.7 bits (91), Expect = 0.79, Method: Compositional matrix adjust. Identities = 28/98 (28%), Positives = 48/98 (48%), Gaps = 1/98 (1%) Query: 68 AGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAW 127 GF I +G SS + L GF+ L + + + +G + GR S+ L+ W Sbjct: 200 GGFLIPEGASENAMLSSVPSRDLGGFMLNMMLGVTCVSLSVPLGIALALGRQSSMPLIKW 259 Query: 128 ICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVL 165 IC +++E R + PL+ + F+ +LS PD ++ L Sbjct: 260 ICVIFIEFVRGV-PLITLLFVASVMLSYFFPPDATVDL 296 >gi|238787848|ref|ZP_04631645.1| ABC-type amino acid transport system permease component [Yersinia frederiksenii ATCC 33641] gi|238724191|gb|EEQ15834.1| ABC-type amino acid transport system permease component [Yersinia frederiksenii ATCC 33641] Length = 248 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 39/129 (30%), Positives = 76/129 (58%), Gaps = 1/129 (0%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 PE ++ AL+ +A++A V++G++A+ GQ +A ++LG + V+LPQA+R + Sbjct: 94 PEITTVVCALALIASAYLAHAVKAGIVAIGAGQWQAGLSLGFNRWQVLWFVVLPQALRMM 153 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG-QAIEIILIWMFIYLSLSIMIA 382 +P +Q+++L+K++SLA VG +L + + N++ +E+ L +Y L + + Sbjct: 154 VPSFINQWISLIKDTSLAYIVGVNELTFLATQVNNRSMVYPMEVFLFVALVYFVLCLTLD 213 Query: 383 LFMNRLNAK 391 L N LN + Sbjct: 214 LLANALNRR 222 >gi|322832387|ref|YP_004212414.1| polar amino acid ABC transporter inner membrane subunit [Rahnella sp. Y9602] gi|321167588|gb|ADW73287.1| polar amino acid ABC transporter, inner membrane subunit [Rahnella sp. Y9602] Length = 237 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 57/172 (33%), Positives = 88/172 (51%), Gaps = 22/172 (12%) Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251 F + G+VL+L + + G L Y+ +L G P L +Q+ F VL Sbjct: 32 FGIIAGLVLALL-----QESRFRAGSVLAFFYL--WLFRGTPVL------FQIIFVYNVL 78 Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311 F + F +ALS A++AEI+RSGL AV GQ A +ALG+T + Sbjct: 79 PTFGLRFSA-----FTCAVMALSLNEGAYMAEILRSGLQAVRSGQRTAGMALGMTQSQIM 133 Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363 R ++LPQA R ++PP+ +Q +++LK+S+L + +L+ I NQT A Sbjct: 134 RKIVLPQAARIVLPPMGNQMISMLKSSALVSVIAVQELL----LIANQTASA 181 >gi|238019791|ref|ZP_04600217.1| hypothetical protein VEIDISOL_01666 [Veillonella dispar ATCC 17748] gi|282849422|ref|ZP_06258807.1| ABC transporter, permease protein [Veillonella parvula ATCC 17745] gi|294794721|ref|ZP_06759856.1| probable amino-acid permease protein YxeN [Veillonella sp. 3_1_44] gi|237863315|gb|EEP64605.1| hypothetical protein VEIDISOL_01666 [Veillonella dispar ATCC 17748] gi|282581126|gb|EFB86524.1| ABC transporter, permease protein [Veillonella parvula ATCC 17745] gi|294454083|gb|EFG22457.1| probable amino-acid permease protein YxeN [Veillonella sp. 3_1_44] Length = 238 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 49/173 (28%), Positives = 91/173 (52%), Gaps = 11/173 (6%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 +++P + + + +GLP L L AL+ Q P V F+++ + L+ + Sbjct: 65 RSIPNMVLLYLVYYGLPILFL-ALEDQTGVHVPF---------EKVPATFVAV-VGLTLH 113 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 T A+++EI R+ L +VP+GQMEAA A+G+T +A R ++LPQA +P T+Q+LN +K Sbjct: 114 TGAYLSEIFRAALQSVPKGQMEAAQAIGMTWFQAFRRIVLPQATVFALPLFTNQFLNTMK 173 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 ++S+ + +L + Q E ++ ++ + I+ +RL Sbjct: 174 STSIVFVITVIELFGAAKLYTEENSQYFEAYIVVAGLFWVMGIVFEFIFHRLE 226 >gi|222080908|ref|YP_002540271.1| amino acid ABC transporter [Agrobacterium radiobacter K84] gi|221725587|gb|ACM28676.1| amino acid ABC transporter [Agrobacterium radiobacter K84] Length = 238 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 64/178 (35%), Positives = 89/178 (50%), Gaps = 17/178 (9%) Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252 +F G VL+L T +S F G + LL + TLV + L PVL Sbjct: 14 AFFHGAVLTLLITIVSLFFGIIVGLVIALLQETELRAVKAATLVYL----WLFRGTPVLF 69 Query: 253 QFNFIGGSTVSPEF-------MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305 Q FI V P F +S +ALS A++AEI+RSGL AV +GQ A +ALG+ Sbjct: 70 QIIFI--YNVLPGFGIRLSAILSAVLALSLNEGAYMAEILRSGLHAVKKGQRTAGLALGM 127 Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363 T R V++PQA R ++P + +Q + +LK S+L V +L+ V NQT A Sbjct: 128 TRASVMRFVVMPQAARIVLPAVGNQMIGMLKTSALVSVVAVEELLLVA----NQTASA 181 >gi|116494154|ref|YP_805888.1| ABC-type amino acid transport system, permease component [Lactobacillus casei ATCC 334] gi|116104304|gb|ABJ69446.1| amino acid ABC transporter membrane protein, PAAT family [Lactobacillus casei ATCC 334] Length = 237 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 50/186 (26%), Positives = 94/186 (50%), Gaps = 33/186 (17%) Query: 193 SFVLGIVLSLFA--TRLS-------------RHFHEKTGKALPLLYISTFLIFGLPTLVL 237 SF +G++++L TR+S F+ ++ PLL + FGLP+L++ Sbjct: 27 SFAIGLIIALITALTRISVRKGFWITFAKGFASFYVWLFRSTPLLVQLFIVFFGLPSLII 86 Query: 238 IAL-KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296 + + + D + G F S T A+ AE +R+ L+++ GQ Sbjct: 87 PGIFPHGIKLDPVIAGIITF-----------------SLNTGAYCAETIRAALLSIDHGQ 129 Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356 EAA ++GL R R +++PQA+R+ +PPL++ +++L+K++SLA ++ ++ V I Sbjct: 130 WEAAYSVGLPRRLVLREIIIPQALRTAVPPLSNSFISLVKDTSLAASITIVEMFQVSQQI 189 Query: 357 INQTGQ 362 + Q Sbjct: 190 AAENYQ 195 >gi|323350547|ref|ZP_08086209.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis VMC66] gi|322123229|gb|EFX94914.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis VMC66] Length = 230 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 40/122 (32%), Positives = 73/122 (59%), Gaps = 2/122 (1%) Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 AA IAE+ ++ +AVP+GQ EA +++GLT + ++LPQA R +P LT+ LNL+++ Sbjct: 109 AAMIAEVFKAAYLAVPKGQTEAGLSIGLTPAQTFLRIVLPQAFRIALPNLTTALLNLMRD 168 Query: 338 SSLAVAVGFADLVSVGGTII--NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395 ++LA +G D++ G +I N ++E IY ++++++L L + +K Sbjct: 169 AALAYTIGAVDVMGAGQNLISRNLGNYSLETYTAVALIYWGIALVVSLASQLLEKSLTVK 228 Query: 396 EK 397 E+ Sbjct: 229 ER 230 >gi|301799826|emb|CBW32397.1| putative glutamine transporter [Streptococcus pneumoniae OXC141] Length = 378 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 44/135 (32%), Positives = 83/135 (61%), Gaps = 13/135 (9%) Query: 214 KTGKALPLLYISTFLIF---GLPTLVLIALKYQL-HFDKPVLGQFNFIGGSTVSPEFMSL 269 + K PL++++ ++ G P +V I + + L H + P + Q +G +F L Sbjct: 44 QCSKFKPLVWLANLYVWIFRGTPMMVQIMIAFALMHINAPTI-QIGILG-----VDFSRL 97 Query: 270 Y---IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326 + +S + A+++E VR+G+ AVP+GQ+EAA +LG+ + A R V+LPQA+++I+P Sbjct: 98 IPGILIISMNSGAYVSETVRAGINAVPKGQLEAAYSLGIRPKNAMRYVILPQAVKNILPA 157 Query: 327 LTSQYLNLLKNSSLA 341 L ++++ ++K+SSL Sbjct: 158 LGNEFITIIKDSSLG 172 >gi|70733845|ref|YP_257485.1| amino acid ABC transporter permease [Pseudomonas fluorescens Pf-5] gi|68348144|gb|AAY95750.1| amino acid ABC transporter, permease protein [Pseudomonas fluorescens Pf-5] Length = 229 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 65/214 (30%), Positives = 108/214 (50%), Gaps = 17/214 (7%) Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239 TLT++ + +L I L + R S+ ++ + ALP YI F G P LV + Sbjct: 18 TLTLELVGIAVILGLLLAIPLGI--ARSSKLWYVR---ALPYAYI--FFFRGTPLLVQLF 70 Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295 L Y L QF+ + S + P F ++ +TAA+IAEI+R + A+P G Sbjct: 71 LVYY------GLAQFDAVRDSFMWPYLRDPFWCATATMTLHTAAYIAEILRGAIQAIPPG 124 Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355 ++EAA ALG++ KA ++LP+A R +P +++ + +LK SSLA V +L + T Sbjct: 125 EIEAARALGMSRPKALFYIILPRAARIGLPAYSNEVILMLKASSLASTVTLLELTGMART 184 Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 II + +++ YL +S ++ +L Sbjct: 185 IIARNYLTVDMFFTAGVFYLLMSFILVQAFRQLE 218 >gi|313608296|gb|EFR84288.1| arginine transport system permease protein ArtQ [Listeria monocytogenes FSL F2-208] Length = 120 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 37/112 (33%), Positives = 71/112 (63%), Gaps = 1/112 (0%) Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 AA+ AEI R G +++ GQ E+A LGLT+ + R ++LPQ ++ ++P + ++ +NL+K+ Sbjct: 3 AAYFAEIFRGGFLSIENGQYESAKVLGLTYGQTLRKIVLPQVVKRVLPAIGNEVINLVKD 62 Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 SSL +G DL+ G +++ I ++L+ + IYL+L+ ++ + +L Sbjct: 63 SSLVYILGIGDLLRAGKIAMSRDVTLIPLVLVAV-IYLALTAILTVLFKQLE 113 >gi|295706522|ref|YP_003599597.1| arginine ABC transporter permease ArtQ [Bacillus megaterium DSM 319] gi|294804181|gb|ADF41247.1| arginine ABC transporter, permease protein ArtQ [Bacillus megaterium DSM 319] Length = 223 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 53/176 (30%), Positives = 90/176 (51%), Gaps = 37/176 (21%) Query: 191 VFSFVLGIVLSLFATRLSRH--------FHEKTGKALPLLYISTFLIFGLPTLVLIALKY 242 + FVLG++LSL ++SR+ + + PL+ + FGLP L Sbjct: 35 ILGFVLGVILSL--CKISRNKPLQWFADAYTSVFRGTPLVLQLLLIYFGLPQL------- 85 Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302 L FD G +AA+I+EI+R+G++AV +GQ EAA+A Sbjct: 86 -LGFDIAPFPAAVAAFGLN---------------SAAYISEIIRAGILAVDKGQREAALA 129 Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS----VGG 354 LG+ +R+ ++LPQA+++I+P L ++++ L K S++ +G D++ VGG Sbjct: 130 LGIPYRRMMGQIILPQALKNILPALMNEFITLTKESAIVTVIGALDIMRRAYIVGG 185 >gi|294501175|ref|YP_003564875.1| arginine ABC transporter permease ArtQ [Bacillus megaterium QM B1551] gi|294351112|gb|ADE71441.1| arginine ABC transporter, permease protein ArtQ [Bacillus megaterium QM B1551] Length = 219 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 53/176 (30%), Positives = 90/176 (51%), Gaps = 37/176 (21%) Query: 191 VFSFVLGIVLSLFATRLSRH--------FHEKTGKALPLLYISTFLIFGLPTLVLIALKY 242 + FVLG++LSL ++SR+ + + PL+ + FGLP L Sbjct: 31 ILGFVLGVILSL--CKISRNKPLQWFADAYTSVFRGTPLVLQLLLIYFGLPQL------- 81 Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302 L FD G +AA+I+EI+R+G++AV +GQ EAA+A Sbjct: 82 -LGFDIAPFPAAVAAFGLN---------------SAAYISEIIRAGILAVDKGQREAALA 125 Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS----VGG 354 LG+ +R+ ++LPQA+++I+P L ++++ L K S++ +G D++ VGG Sbjct: 126 LGIPYRRMMGQIILPQALKNILPALMNEFITLTKESAIVTVIGALDIMRRAYIVGG 181 >gi|282856520|ref|ZP_06265795.1| polar amino acid ABC transporter, inner membrane subunit [Pyramidobacter piscolens W5455] gi|282585641|gb|EFB90934.1| polar amino acid ABC transporter, inner membrane subunit [Pyramidobacter piscolens W5455] Length = 217 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 40/119 (33%), Positives = 69/119 (57%), Gaps = 4/119 (3%) Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 ++ ++ EIVR G+ VP+GQ EAA LGL++ + + ++LPQA+R ++P + ++++ L+K Sbjct: 99 SSGYVGEIVRGGIEGVPKGQWEAAKMLGLSYWQTMKSIILPQAIRHMLPAIGNEFVTLIK 158 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL----SIMIALFMNRLNAK 391 SSL + +DL VG + + T + E + +YL L S + L NR K Sbjct: 159 ESSLLSVLAISDLTMVGQQVRSVTYASFETFIFVALVYLVLTSVTSGALQLLENRWKVK 217 >gi|254712480|ref|ZP_05174291.1| amino acid ABC transporter, permease protein [Brucella ceti M644/93/1] gi|254715553|ref|ZP_05177364.1| amino acid ABC transporter, permease protein [Brucella ceti M13/05/1] Length = 226 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 40/126 (31%), Positives = 76/126 (60%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + I + A+ +EI+R+ + +VP+GQ EAA +G++ R+A +LPQA R+ +P Sbjct: 89 FPAALIGFTLNIGAYSSEIIRAVISSVPKGQWEAAYFIGMSWRQALIRTILPQATRTAVP 148 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PL++ +++L+K++SLA A+ +L I+ T + + + + IYL+LS +++ Sbjct: 149 PLSNTFISLIKDTSLAAAITVPELFQSAQRIVATTYEPLILYIEAALIYLALSSILSALQ 208 Query: 386 NRLNAK 391 RL + Sbjct: 209 VRLERR 214 >gi|330821515|ref|YP_004350377.1| amino-acid transmembrane ABC transporter protein [Burkholderia gladioli BSR3] gi|327373510|gb|AEA64865.1| amino-acid transmembrane ABC transporter protein [Burkholderia gladioli BSR3] Length = 223 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 62/187 (33%), Positives = 98/187 (52%), Gaps = 13/187 (6%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 V +F +GIV+ L+R + A L Y+S LI G+P L+ + + Y + P Sbjct: 31 VAAFAIGIVIGAL-LLLARQHGGRVAAACVLAYVS--LIRGVPALIQMLVAY---YVLPA 84 Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 L T+SP + +AL+ TAA+I+EI+R L ++ RGQ+ AA ALG++ + Sbjct: 85 LLDI------TLSP-LQAGILALALNTAAYISEILRGALHSLGRGQIPAARALGMSPVQV 137 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370 R ++ PQ IPPLTS++ LLK SSL + DL +V QT Q +++ Sbjct: 138 WRHIVFPQLFLRSIPPLTSEFTMLLKASSLLSIIAVHDLATVARDATLQTNQPLQVFSAA 197 Query: 371 MFIYLSL 377 +Y ++ Sbjct: 198 AAVYFAI 204 >gi|237800638|ref|ZP_04589099.1| amino acid ABC transporter permease [Pseudomonas syringae pv. oryzae str. 1_6] gi|331023497|gb|EGI03554.1| amino acid ABC transporter permease [Pseudomonas syringae pv. oryzae str. 1_6] Length = 220 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 43/129 (33%), Positives = 72/129 (55%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + I L+ + + ++EIVR L A+P GQ+EA A+GL + R VLLPQAMR I+P Sbjct: 91 FQAGAIGLTLFCGSHVSEIVRGALQAIPPGQIEAGKAIGLRFSQTLRYVLLPQAMRQILP 150 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 + ++K S+L +G A+L+ +I +T +E L F++ ++ I L Sbjct: 151 TWVNSSTEIVKASTLLSVIGVAELLLSTQQVIARTFMTLEFYLFAGFLFFLINYAIELLG 210 Query: 386 NRLNAKIAL 394 ++ ++AL Sbjct: 211 RQIEKRVAL 219 >gi|229829573|ref|ZP_04455642.1| hypothetical protein GCWU000342_01670 [Shuttleworthia satelles DSM 14600] gi|229791562|gb|EEP27676.1| hypothetical protein GCWU000342_01670 [Shuttleworthia satelles DSM 14600] Length = 244 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 62/244 (25%), Positives = 114/244 (46%), Gaps = 31/244 (12%) Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL-SLFATRLSRHFHEKTGKAL-----PLLY 223 F+N+ + +I VF+ ++GI+L +L AT R +K+G+ + P Y Sbjct: 16 FINDNRWQSLVSGLGVTLQITVFAVIVGILLGALVAT--VRSTWDKSGEEMGRRKSPAYY 73 Query: 224 ----------ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273 I +I G P +V + + Y + F +T A Sbjct: 74 LLKGFNVICKIYLTVIRGTPVVVQLMISYFIIF-------------ATSKNAVAVAIFAF 120 Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333 +AA++AEI+R G++++ GQ EA +LG + + ++LPQ ++++P L ++++ Sbjct: 121 GLNSAAYVAEIIRGGIMSIDEGQFEAGRSLGFNYPQTMIYIILPQVFKAVLPALLNEFIT 180 Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393 L+K +S+A VG DL G I ++T A + IYL + I++ RL ++ Sbjct: 181 LVKETSVAGYVGIMDLTKAGDVIRSRTYSAFMPLFAVAGIYLVIVIILETVFGRLERRLR 240 Query: 394 LKEK 397 E+ Sbjct: 241 QNER 244 >gi|170781634|ref|YP_001709966.1| putative glutamate permease [Clavibacter michiganensis subsp. sepedonicus] gi|169156202|emb|CAQ01344.1| putative glutamate permease [Clavibacter michiganensis subsp. sepedonicus] Length = 274 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 43/128 (33%), Positives = 74/128 (57%), Gaps = 2/128 (1%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 + S+ AL+ Y A I E +RSG++ +PRGQ EA +A+GL + LV PQA R+++P Sbjct: 130 YWSVVTALTLYNGAIIGEALRSGILGLPRGQREAGLAIGLRPLQNRLLVEFPQAFRTMLP 189 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA--IEIILIWMFIYLSLSIMIAL 383 + +Q + L+K+++L V L G I+ T +A + I ++ + +YL L++ ++ Sbjct: 190 IIVAQLVVLIKDTALGTIVSLVGLTKQGELILEATSRANSLPIFVVMVGMYLVLNLSVST 249 Query: 384 FMNRLNAK 391 RL K Sbjct: 250 IARRLARK 257 >gi|311103232|ref|YP_003976085.1| amino ABC transporter permease, 3-TM region, His/Glu/Gln/Arg/opine family domain-containing protein 2 [Achromobacter xylosoxidans A8] gi|310757921|gb|ADP13370.1| amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family domain protein 2 [Achromobacter xylosoxidans A8] Length = 220 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 40/116 (34%), Positives = 70/116 (60%) Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327 S IA + + AA+ +EI+R+GL +V GQ +AA A GL+ +A R V+LPQA+R+++P L Sbjct: 93 SALIAFTLFEAAYYSEIIRAGLQSVRSGQWQAAAASGLSRAQALRFVVLPQALRNMMPVL 152 Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 +Q + L +++SL + D ++ + N+ + IE+ L +Y L ++L Sbjct: 153 ITQAIVLFQDTSLVYVISLRDFMTSTSIVANRDNRLIEMYLFAALVYFVLCASLSL 208 >gi|307300763|ref|ZP_07580538.1| polar amino acid ABC transporter, inner membrane subunit [Sinorhizobium meliloti BL225C] gi|306904297|gb|EFN34882.1| polar amino acid ABC transporter, inner membrane subunit [Sinorhizobium meliloti BL225C] Length = 218 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 42/102 (41%), Positives = 63/102 (61%), Gaps = 1/102 (0%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G ++P +++ IAL+ + +AF+ EI R + AVP+GQ EAA ALGL + ++ R V+LPQ Sbjct: 80 GFAINP-WIAATIALALHASAFLGEIWRGCIEAVPKGQREAATALGLRYFRSMRHVILPQ 138 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 A R + P + L+K +SLA +GF +L G I N T Sbjct: 139 AARIAVAPTVGFLVQLIKGTSLASIIGFTELTRQGQIINNAT 180 >gi|238019979|ref|ZP_04600405.1| hypothetical protein VEIDISOL_01855 [Veillonella dispar ATCC 17748] gi|237863503|gb|EEP64793.1| hypothetical protein VEIDISOL_01855 [Veillonella dispar ATCC 17748] Length = 218 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 38/120 (31%), Positives = 67/120 (55%), Gaps = 1/120 (0%) Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 AA++ EI R G+ ++ RGQ E A LG T+ + R ++LPQ + ++PPL ++ +NLLK+ Sbjct: 100 AAYLCEIFRGGIQSISRGQYEGAKVLGFTYAQTMRKIILPQMFKRVLPPLANETINLLKD 159 Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 +SL + D++ + +I+ Q I L+ YL + ++ N L + A+ E Sbjct: 160 TSLVYVLAMNDILRITKSIV-QRDFDISAFLVAALFYLIFTFILTNIFNYLERRFAVYED 218 >gi|227327914|ref|ZP_03831938.1| L-amino acid ABC transporter permease protein [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 364 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 37/93 (39%), Positives = 63/93 (67%), Gaps = 1/93 (1%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G+T+ +L + + + +A++AE+VR GL A+P+GQ EAA +LGL + + LV+LPQ Sbjct: 222 GTTIDKLLRAL-VGVILFQSAYVAEVVRGGLQALPKGQYEAAESLGLGYWRMQGLVILPQ 280 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 A++ +IP L + ++L K++SL + +G DL S Sbjct: 281 ALKMVIPGLVNTIISLFKDTSLVIIIGLFDLFS 313 >gi|227488107|ref|ZP_03918423.1| ABC superfamily ATP binding cassette transporter, permease protein [Corynebacterium glucuronolyticum ATCC 51867] gi|227541504|ref|ZP_03971553.1| ABC superfamily ATP binding cassette transporter, permease protein [Corynebacterium glucuronolyticum ATCC 51866] gi|227091969|gb|EEI27281.1| ABC superfamily ATP binding cassette transporter, permease protein [Corynebacterium glucuronolyticum ATCC 51867] gi|227182786|gb|EEI63758.1| ABC superfamily ATP binding cassette transporter, permease protein [Corynebacterium glucuronolyticum ATCC 51866] Length = 299 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 37/81 (45%), Positives = 56/81 (69%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+ + L AA++AE+VR+GL AVP GQ EA+ ALG++ + + +LPQAMR IIP Sbjct: 141 FLLACLGLGLNEAAYMAEVVRAGLQAVPEGQYEASKALGMSWWQTMKRTVLPQAMRIIIP 200 Query: 326 PLTSQYLNLLKNSSLAVAVGF 346 P ++ +++LK +SL VAV + Sbjct: 201 PTGNELISMLKTTSLVVAVPY 221 >gi|220913269|ref|YP_002488578.1| polar amino acid ABC transporter inner membrane protein [Arthrobacter chlorophenolicus A6] gi|219860147|gb|ACL40489.1| polar amino acid ABC transporter, inner membrane subunit [Arthrobacter chlorophenolicus A6] Length = 279 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 50/135 (37%), Positives = 82/135 (60%), Gaps = 4/135 (2%) Query: 216 GKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSC 275 G AL LL I+ I +P V + L++ ++ F +G T SP F+++ L Sbjct: 84 GLALCLLRIADSPIIRIP--VRVVLEFLRGMPVVLMMLFVLLGFGT-SP-FIAVVTGLVL 139 Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335 Y AA AEI+R+G+ ++P+GQ EA +A+GLT ++ L+ LPQA+R ++P L +Q + LL Sbjct: 140 YNAAVFAEIIRAGISSLPKGQREAGLAIGLTSYRSRMLIELPQAIRRMMPSLVAQMVVLL 199 Query: 336 KNSSLAVAVGFADLV 350 K++SL V + +L+ Sbjct: 200 KDTSLGYIVAYGELL 214 >gi|186473893|ref|YP_001861235.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia phymatum STM815] gi|184196225|gb|ACC74189.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia phymatum STM815] Length = 250 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 46/135 (34%), Positives = 77/135 (57%), Gaps = 4/135 (2%) Query: 251 LGQFNFIGGSTVSPEFMSLYI----ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306 LGQF I S + P Y+ +L+ TA + AEI+R GL+AVP GQ+EA ++GL+ Sbjct: 78 LGQFGVIRESFLWPVLREPYVCAVLSLALCTAGYTAEIIRGGLMAVPVGQIEAGYSIGLS 137 Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 R ++ P A+R +P +++ + L+K+++LA V ++ V II QT + E+ Sbjct: 138 GFSLLRRIIGPIALRQCLPAYSTEAVLLVKSTALASLVTVWEVTGVAQQIIQQTYRTTEV 197 Query: 367 ILIWMFIYLSLSIMI 381 + IYL L+ ++ Sbjct: 198 FICAALIYLFLNFVV 212 >gi|57167897|ref|ZP_00367037.1| amino acid ABC transporter, permease protein [Campylobacter coli RM2228] gi|57021019|gb|EAL57683.1| amino acid ABC transporter, permease protein [Campylobacter coli RM2228] Length = 261 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 40/119 (33%), Positives = 73/119 (61%) Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 LS ++AA+++EI R+G+++VP Q+E+A ALGL+ R+ ++ PQA+++I+ P++ Q Sbjct: 140 LSMFSAAYLSEIFRAGILSVPIIQIESARALGLSERQIFLYIIFPQAIKNILAPISGQLA 199 Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 NL+K+SSL + +L + + +E ++ F YL L++ I +F L K Sbjct: 200 NLIKDSSLLSVIALNELTQSIQEVNSYIFATLEGYIVLAFAYLILTLPIGVFSRYLERK 258 >gi|330429518|gb|AEC20852.1| polar amino acid ABC transporter, inner membrane subunit [Pusillimonas sp. T7-7] Length = 507 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 44/137 (32%), Positives = 79/137 (57%) Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321 +S F + IAL A++AEI R G+++VPRGQ EA ALG+ + RL+++PQA+R Sbjct: 90 LSSPFYAGLIALVLSETAYMAEIHRGGILSVPRGQYEAGKALGIRYSGIQRLIVIPQAIR 149 Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 +P L++Q++ ++K +SL + +++ VG + Q E +L F Y+ + + Sbjct: 150 IALPTLSNQFVTIVKLTSLVSVISLTEILLVGQRLYTQNFLIFETMLAVAFYYVLVVTLF 209 Query: 382 ALFMNRLNAKIALKEKK 398 + RL A + + ++K Sbjct: 210 DKVLIRLEAFLDVTQRK 226 >gi|271500964|ref|YP_003333989.1| polar amino acid ABC transporter inner membrane subunit [Dickeya dadantii Ech586] gi|270344519|gb|ACZ77284.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya dadantii Ech586] Length = 219 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 40/129 (31%), Positives = 77/129 (59%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + + + + A+IAEI R ++++ +G EA +ALGL+ R R V+ P A+R ++P Sbjct: 90 FSAAVVTIMINSGAYIAEITRGSVLSIHKGFTEAGLALGLSRRDTLRHVIAPLALRRMLP 149 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PL +Q++ +K++SL + +G A+L G II +A+EI IYL ++++++ + Sbjct: 150 PLGNQWIISIKDTSLFIVIGVAELTRQGQEIIAGNFRALEIWSAVAIIYLVITLVLSAVL 209 Query: 386 NRLNAKIAL 394 L ++ + Sbjct: 210 RWLETRLKI 218 >gi|238789895|ref|ZP_04633675.1| Inner membrane amino-acid ABC transporter permease protein yhdY [Yersinia frederiksenii ATCC 33641] gi|238721968|gb|EEQ13628.1| Inner membrane amino-acid ABC transporter permease protein yhdY [Yersinia frederiksenii ATCC 33641] Length = 323 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 35/81 (43%), Positives = 56/81 (69%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + + + +A++AE+VR GL A+P+GQ EAA +LGL + K LV+LPQA++ +IP L + Sbjct: 192 VGVVLFQSAYVAEVVRGGLQALPKGQTEAAESLGLGYWKTQGLVILPQALKMVIPGLVNT 251 Query: 331 YLNLLKNSSLAVAVGFADLVS 351 + L K++SL + +G DL S Sbjct: 252 IIALFKDTSLVIIIGLFDLFS 272 >gi|29829028|ref|NP_823662.1| glutamate transporter permease [Streptomyces avermitilis MA-4680] gi|29606134|dbj|BAC70197.1| putative glutamate ABC transporter permease [Streptomyces avermitilis MA-4680] Length = 221 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 46/126 (36%), Positives = 78/126 (61%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + L YT+AF+ E +RSG+ VP GQ EAA A+GL + L++LPQA RS++ PLT+ Sbjct: 96 LGLIAYTSAFVCEALRSGINTVPVGQAEAARAIGLNFTQVLTLIVLPQAFRSVVGPLTNV 155 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 + L KN+++A A+G A+ ++ +I Q I I ++ F ++ L++ L + ++ Sbjct: 156 LIALTKNTTVAAAIGVAEAAALMKEMIENEAQLILISAVFAFGFVCLTLPTGLILGWVSK 215 Query: 391 KIALKE 396 K+A+K Sbjct: 216 KVAVKR 221 >gi|238793127|ref|ZP_04636755.1| ABC-type amino acid transport system permease component [Yersinia intermedia ATCC 29909] gi|238727500|gb|EEQ19026.1| ABC-type amino acid transport system permease component [Yersinia intermedia ATCC 29909] Length = 251 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 39/129 (30%), Positives = 76/129 (58%), Gaps = 1/129 (0%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 PE ++ AL+ +A++A V++G++A+ GQ +A ++LG + V+LPQA+R + Sbjct: 94 PEITTVVCALALIASAYLAHAVKAGIVAIGAGQWQAGLSLGFNRWQVLWFVVLPQALRMM 153 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG-QAIEIILIWMFIYLSLSIMIA 382 +P +Q+++L+K++SLA VG +L + + N++ +E+ L +Y L + + Sbjct: 154 VPSFINQWISLIKDTSLAYIVGVNELTFLATQVNNRSMVYPMEVFLFVALVYFVLCLALD 213 Query: 383 LFMNRLNAK 391 L N LN + Sbjct: 214 LLANGLNRR 222 >gi|294793250|ref|ZP_06758396.1| probable amino-acid permease protein YxeN [Veillonella sp. 6_1_27] gi|313893815|ref|ZP_07827381.1| ABC transporter, permease protein [Veillonella sp. oral taxon 158 str. F0412] gi|294456195|gb|EFG24559.1| probable amino-acid permease protein YxeN [Veillonella sp. 6_1_27] gi|313441379|gb|EFR59805.1| ABC transporter, permease protein [Veillonella sp. oral taxon 158 str. F0412] Length = 238 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 49/173 (28%), Positives = 91/173 (52%), Gaps = 11/173 (6%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 +++P + + + +GLP L L AL+ Q P V F+++ + L+ + Sbjct: 65 RSIPNMVLLYLVYYGLPILFL-ALEDQTGVHVPF---------EKVPATFVAV-VGLTLH 113 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 T A+++EI R+ L +VP+GQMEAA A+G+T +A R ++LPQA +P T+Q+LN +K Sbjct: 114 TGAYLSEIFRAALQSVPKGQMEAAQAIGMTWFQAFRRIVLPQATVFALPLFTNQFLNTMK 173 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 ++S+ + +L + Q E ++ ++ + I+ +RL Sbjct: 174 STSIVFVITVIELFGAAKLYTEENSQYFEAYIVVAGLFWVMGIVFEFIFHRLE 226 >gi|239616532|ref|YP_002939854.1| polar amino acid ABC transporter, inner membrane subunit [Kosmotoga olearia TBF 19.5.1] gi|239505363|gb|ACR78850.1| polar amino acid ABC transporter, inner membrane subunit [Kosmotoga olearia TBF 19.5.1] Length = 206 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 62/221 (28%), Positives = 111/221 (50%), Gaps = 41/221 (18%) Query: 188 KIFVFSFVLGIVLSL-------FATRLSRHF---HEKTGKALPLLYISTFLIFGLPTLVL 237 K+ +S LG++L+L + R+++ +E+ +++PLL I + +G P Sbjct: 4 KLTFWSLGLGLILALPFSFGQVYGGRIAKGIIVVYERLFRSIPLLVILFLIFYGFP---- 59 Query: 238 IALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQM 297 K + F SP F + + L +AA+ ++I R + +V QM Sbjct: 60 ---KINVRF----------------SP-FTACILGLGLRSAAYQSQIFRGAIQSVSETQM 99 Query: 298 EAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII 357 AA +LG++ + R V+LPQA+R +P T+++ +LK+SSLA A+G +L+ GG II Sbjct: 100 RAARSLGMSRLQGFRHVVLPQALRIALPGWTNEFTIVLKDSSLAYALGVTELLRQGGYII 159 Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 + + M IYLS++++ + +N + EKK Sbjct: 160 STKYEP-------MLIYLSVAVIYLVITLGINRGLGTVEKK 193 >gi|16262493|ref|NP_435286.1| ABC transporter, permease [Sinorhizobium meliloti 1021] gi|14523098|gb|AAK64698.1| ABC transporter, permease [Sinorhizobium meliloti 1021] Length = 218 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 42/102 (41%), Positives = 63/102 (61%), Gaps = 1/102 (0%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G ++P +++ IAL+ + +AF+ EI R + AVP+GQ EAA ALGL + ++ R V+LPQ Sbjct: 80 GFAINP-WIAATIALALHASAFLGEIWRGCIEAVPKGQREAATALGLRYFRSMRHVILPQ 138 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 A R + P + L+K +SLA +GF +L G I N T Sbjct: 139 AARIAVAPTVGFLVQLIKGTSLASIIGFTELTRQGQIINNAT 180 >gi|313123036|ref|YP_004033295.1| ABC amino acid transporter permease [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|312279599|gb|ADQ60318.1| ABC-type amino acid transport system, permease component [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|325684798|gb|EGD26950.1| polar amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus delbrueckii subsp. lactis DSM 20072] Length = 247 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 55/197 (27%), Positives = 104/197 (52%), Gaps = 9/197 (4%) Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252 SF+LG++++L T L R +K G L + I F ++ + L+ + ++F P L Sbjct: 39 SFILGLIIAL-VTALVR-ISDKGGGFLIIKAIFRFYVWLFRSTPLLVQLFIVYFGLPYLK 96 Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312 + F + I S T A+ +E +R+ + +VPR Q EAA ++G+ K R Sbjct: 97 IPGLLPNGIKLAPFTAGIITFSLNTGAYASETIRAAIQSVPREQWEAAASIGMNRGKTLR 156 Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372 ++LPQA++ IPPL++ ++ L+K++SLA ++ ++ V I + Q + Sbjct: 157 RIILPQALKVSIPPLSNSFIGLVKDTSLAASITIVEMFEVSQQIAAENYQP-------LI 209 Query: 373 IYLSLSIMIALFMNRLN 389 +Y ++++ ALF + L+ Sbjct: 210 MYSLVALVYALFCSVLS 226 >gi|296111776|ref|YP_003622158.1| glutamine ABC transporter, permease protein [Leuconostoc kimchii IMSNU 11154] gi|295833308|gb|ADG41189.1| glutamine ABC transporter, permease protein [Leuconostoc kimchii IMSNU 11154] Length = 213 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 39/129 (30%), Positives = 74/129 (57%), Gaps = 1/129 (0%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P F + IA AA++AEI R GL +VPRGQ +AA LG T + ++LPQ ++ + Sbjct: 82 PRFEAAVIAFIINYAAYLAEIFRGGLQSVPRGQYDAARVLGFTRTQTFFKIVLPQVIKIV 141 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 +P ++ +NL+K++SL +G D++ G ++ + +L+ + IYL ++ ++ + Sbjct: 142 VPSFGNEVINLVKDTSLVYVIGLGDILRAGNIAASRDVTLVPYLLVGL-IYLLMTAIVTV 200 Query: 384 FMNRLNAKI 392 + R ++ Sbjct: 201 LLRRSEKRL 209 >gi|313897815|ref|ZP_07831356.1| arginine ABC transporter, permease protein ArtQ [Clostridium sp. HGF2] gi|312957350|gb|EFR38977.1| arginine ABC transporter, permease protein ArtQ [Clostridium sp. HGF2] Length = 218 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 50/198 (25%), Positives = 103/198 (52%), Gaps = 28/198 (14%) Query: 201 SLFATRLSRHFHEKTGKALPL-----LYISTFLI-FGLPTLVLIALKYQLHFDKPVLGQF 254 ++F R+++ F+ + L +Y+ F I FG+P+LV P L Sbjct: 40 TVFLRRMNKVFNLIVAAYIDLFRGTPVYVQMFFIYFGIPSLV------------PGLNIN 87 Query: 255 NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLV 314 N++ G V S + A+++EI+R+G+ + +GQ+EAA ALG++ + + + Sbjct: 88 NWVAGILV----------FSLNSGAYMSEIMRAGIDGIDKGQIEAAKALGVSGKDIGKDI 137 Query: 315 LLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374 ++PQA R+++P + ++++ L K +S+ +G D++ + NQT E +LI +Y Sbjct: 138 IIPQAFRNVLPAVINEFITLTKETSIVSVIGLHDMMYWFYAVKNQTYADFEPLLIVFLVY 197 Query: 375 LSLSIMIALFMNRLNAKI 392 ++ +++L + K+ Sbjct: 198 YIMNKVLSLIGKAIERKL 215 >gi|269797367|ref|YP_003311267.1| polar amino acid ABC transporter inner membrane subunit [Veillonella parvula DSM 2008] gi|269093996|gb|ACZ23987.1| polar amino acid ABC transporter, inner membrane subunit [Veillonella parvula DSM 2008] Length = 218 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 38/120 (31%), Positives = 67/120 (55%), Gaps = 1/120 (0%) Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 AA++ EI R G+ ++ RGQ E A LG T+ + R ++LPQ + ++PPL ++ +NLLK+ Sbjct: 100 AAYLCEIFRGGIQSISRGQYEGAKVLGFTYAQTMRKIILPQMFKRVLPPLANETINLLKD 159 Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 +SL + D++ + +I+ Q I L+ YL + ++ N L + A+ E Sbjct: 160 TSLVYVLAMNDILRITKSIV-QRDFDISAFLVAALFYLIFTFILTNIFNYLERRFAVYED 218 >gi|227893086|ref|ZP_04010891.1| glutamine ABC superfamily ATP binding cassette transporter membrane protein [Lactobacillus ultunensis DSM 16047] gi|227865064|gb|EEJ72485.1| glutamine ABC superfamily ATP binding cassette transporter membrane protein [Lactobacillus ultunensis DSM 16047] Length = 217 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 63/206 (30%), Positives = 101/206 (49%), Gaps = 31/206 (15%) Query: 193 SFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPTLVLIALKYQLHF 246 SFV+G++L L ++ G + LPLL I F FGLP L Sbjct: 34 SFVVGLILGLIRYMKIKYVSAIVGFIIDIIRNLPLLLIIFFTYFGLPQL----------- 82 Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306 G +P S+ AL + A +AEIVRSG+ +V GQME A + G++ Sbjct: 83 ------------GIVTNPTTASI-AALVIFEGAMLAEIVRSGIGSVDPGQMEGARSNGMS 129 Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ-TGQAIE 365 + +A V++PQA+ ++IP L SQ+++L+K++SLA + +L+ I +Q T I Sbjct: 130 YGQAMYHVVMPQALHNMIPALLSQFVSLVKDTSLATIIVLPELLYHAQIIYSQNTTYLIP 189 Query: 366 IILIWMFIYLSLSIMIALFMNRLNAK 391 + +I +Y + ++ N L K Sbjct: 190 MYVIIAIMYFIVCFCLSQVANYLEKK 215 >gi|224418072|ref|ZP_03656078.1| amino acid ABC transporter ATP-binding protein [Helicobacter canadensis MIT 98-5491] gi|253827401|ref|ZP_04870286.1| ABC-type amino acid transport system, permease component [Helicobacter canadensis MIT 98-5491] gi|253510807|gb|EES89466.1| ABC-type amino acid transport system, permease component [Helicobacter canadensis MIT 98-5491] Length = 238 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 65/214 (30%), Positives = 114/214 (53%), Gaps = 17/214 (7%) Query: 177 SFPTLT--MDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234 +FPTL + + I + F+LG +L L + L R + L LYIS F G+P Sbjct: 12 AFPTLLKGVPISLAIAIVGFILGAILGLILS-LIRIYRVPILFQLATLYISFFR--GIPV 68 Query: 235 LVLIALKYQLHFDKP-VLGQFNFIGGSTVSPE------FMSLYIALSCYTAAFIAEIVRS 287 LV I L Y + P VL FN G + FM L AL C +A+++EI RS Sbjct: 69 LVQIFLAY---YGIPLVLRYFNHQYGLNIDISGIDAIYFMYLVYALYC--SAYLSEIFRS 123 Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347 ++++ +GQ+EAA ++G+ +A +++LPQ+M +P + + ++ L+K +SL A Sbjct: 124 SILSIDKGQLEAAYSVGMNTTQALFIIILPQSMLLALPNILNFFIILIKETSLVFAASVP 183 Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 +++ + +++ + +E+ +I IY +SI + Sbjct: 184 EIMGIATLEADRSSKFLEVYIIAALIYWVISIFL 217 >gi|206579211|ref|YP_002240194.1| putative amino acid ABC transporter, permease protein [Klebsiella pneumoniae 342] gi|290510006|ref|ZP_06549376.1| amino acid ABC transporter, permease [Klebsiella sp. 1_1_55] gi|206568269|gb|ACI10045.1| putative amino acid ABC transporter, permease protein [Klebsiella pneumoniae 342] gi|289776722|gb|EFD84720.1| amino acid ABC transporter, permease [Klebsiella sp. 1_1_55] Length = 229 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 49/139 (35%), Positives = 81/139 (58%), Gaps = 10/139 (7%) Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280 LL++ +I G+P + +I + L + P+L + G TV+ +AL+ +TAA Sbjct: 63 LLFLWAEIIRGIPLIFVI---FWLWYLLPMLTGGDLPGAVTVT-------LALAWFTAAS 112 Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340 + V +GL ++P+GQ EAA+ G + RLVLLPQA+R++ P L ++ LLK++SL Sbjct: 113 VMHSVLAGLQSLPKGQYEAALTQGFAPGQTLRLVLLPQALRNVQPSLVGIFIGLLKDTSL 172 Query: 341 AVAVGFADLVSVGGTIINQ 359 A V +L +V G + N+ Sbjct: 173 AFIVNVPELTTVAGQVNNR 191 >gi|170738364|ref|YP_001779624.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia cenocepacia MC0-3] gi|169820552|gb|ACA95134.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia cenocepacia MC0-3] Length = 218 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 68/216 (31%), Positives = 112/216 (51%), Gaps = 18/216 (8%) Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240 +T++ A FV S VLG++L+L +R G + +I GLP +V + Sbjct: 19 VTIEITACAFVLSSVLGLILALMKVSHNRAV-ATAGSTI------VNVIRGLPIIVQL-- 69 Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300 + ++F P LG + S + + L IA S Y A E R+G+ A+ RGQ+EAA Sbjct: 70 -FYMYFVLPDLG----VQLSALQAGVLGLGIAYSAYQA----ENFRAGIEAIDRGQIEAA 120 Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 A+G+ R V+LPQA R +PP + + LLK+SS+A + A++ G I + T Sbjct: 121 HAIGMRGPMIMRRVVLPQAFRIALPPYGNTLVMLLKDSSVASTITVAEITRAGQLIASST 180 Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 Q + + + +YL+L + + +NRL ++AL+ Sbjct: 181 FQNMSVYTLVALLYLALGLSLMFAVNRLGKRLALRR 216 >gi|154245546|ref|YP_001416504.1| polar amino acid ABC transporter, inner membrane subunit [Xanthobacter autotrophicus Py2] gi|154159631|gb|ABS66847.1| polar amino acid ABC transporter, inner membrane subunit [Xanthobacter autotrophicus Py2] Length = 214 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 39/129 (30%), Positives = 70/129 (54%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P ++ +A++ Y+ A++ EI + ++AVPR Q EA L LT + V+LPQA+R Sbjct: 83 PALVAAGVAMTLYSGAYLGEIWKGCILAVPRTQWEAGECLALTKTQRFVFVILPQALRIA 142 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 +PP + ++KN+S +V + F DL I N T + + I IY ++ ++L Sbjct: 143 VPPTVGFLVQIVKNTSYSVVINFFDLTYSAKVINNATYKPFTVFTIAALIYFAICFPMSL 202 Query: 384 FMNRLNAKI 392 +R + ++ Sbjct: 203 LASRFDRRL 211 >gi|295836792|ref|ZP_06823725.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Streptomyces sp. SPB74] gi|197697534|gb|EDY44467.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Streptomyces sp. SPB74] Length = 246 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 48/130 (36%), Positives = 73/130 (56%), Gaps = 2/130 (1%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +A A+ +E+VR L AVPR Q EAA+AL L+ + R V+LPQA +IP LTS Sbjct: 94 VAFGLNYGAYGSEVVRGALNAVPRAQFEAAVALNLSPFQRMRRVILPQAWVQMIPSLTSL 153 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL-- 388 + LLK + L + ADL V + ++TG + L + +Y L+ ++ L MN L Sbjct: 154 LIMLLKATPLLWLISAADLTQVVQAMRDRTGATVPAYLTLLVMYFVLAYLLTLAMNALER 213 Query: 389 NAKIALKEKK 398 +AK L +++ Sbjct: 214 SAKTRLGQRE 223 >gi|161613487|ref|YP_001587452.1| hypothetical protein SPAB_01204 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|168234122|ref|ZP_02659180.1| L-cystine transport system permease protein TcyB [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|168244799|ref|ZP_02669731.1| L-cystine transport system permease protein TcyB [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|168259764|ref|ZP_02681737.1| L-cystine transport system permease protein TcyB [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|194450867|ref|YP_002046003.1| L-cystine transport system permease TcyB [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194469992|ref|ZP_03075976.1| L-cystine transport system permease protein TcyB [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|197265602|ref|ZP_03165676.1| L-cystine transport system permease protein TcyB [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|205352353|ref|YP_002226154.1| ABC transporter membrane protein [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|207856534|ref|YP_002243185.1| ABC transporter membrane protein [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|161362851|gb|ABX66619.1| hypothetical protein SPAB_01204 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194409171|gb|ACF69390.1| L-cystine transport system permease protein TcyB [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194456356|gb|EDX45195.1| L-cystine transport system permease protein TcyB [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|197243857|gb|EDY26477.1| L-cystine transport system permease protein TcyB [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|205272134|emb|CAR36987.1| putative ABC transporter membrane protein [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205331848|gb|EDZ18612.1| L-cystine transport system permease protein TcyB [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|205336344|gb|EDZ23108.1| L-cystine transport system permease protein TcyB [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205351153|gb|EDZ37784.1| L-cystine transport system permease protein TcyB [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|206708337|emb|CAR32640.1| putative ABC transporter membrane protein [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|326627403|gb|EGE33746.1| putative ABC transporter membrane protein [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 222 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 61/207 (29%), Positives = 109/207 (52%), Gaps = 18/207 (8%) Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251 F +LG VL+L R+S + + L YIS F G P LIA + +++ P Sbjct: 32 FGLLLGFVLALM--RMSPLWLVRW---LARFYISIFR--GTP---LIAQLFMIYYGLP-- 79 Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311 QF G + P + I LS TAA+ +E +R+ + A+ +GQ EAA ++G+T + Sbjct: 80 -QF----GIELDP-IPAAMIGLSLNTAAYTSETLRAAISAIDKGQWEAAASIGMTPWQTL 133 Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371 R +LPQA R +PPL++ +++L+K++SLA + +L I ++T + + L Sbjct: 134 RRAILPQAARVALPPLSNSFISLVKDTSLAATIQVPELFRQAQLITSRTLEVFTMYLAAS 193 Query: 372 FIYLSLSIMIALFMNRLNAKIALKEKK 398 IY ++ +++ N ++ +E++ Sbjct: 194 LIYWVMATVLSALQNYFENQLNRQERE 220 Score = 40.0 bits (92), Expect = 0.56, Method: Compositional matrix adjust. Identities = 30/103 (29%), Positives = 49/103 (47%), Gaps = 8/103 (7%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G V T L+ GM ++G ++ R+S LV W+ R Y+ +FR P + +F + Sbjct: 15 LLKGAVFTLQLSIGGMFFGLLLGFVLALMRMSPLWLVRWLARFYISIFRGTPLIAQLFMI 74 Query: 149 YKSV----LSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187 Y + + + PIP I G+ LN + TL +A Sbjct: 75 YYGLPQFGIELDPIPAAMI----GLSLNTAAYTSETLRAAISA 113 >gi|152968869|ref|YP_001333978.1| amino acid ABC transporter membrane protein [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238893278|ref|YP_002918012.1| glutamate/aspartate transport system permease component [Klebsiella pneumoniae NTUH-K2044] gi|330006744|ref|ZP_08305698.1| ABC transporter, permease protein [Klebsiella sp. MS 92-3] gi|150953718|gb|ABR75748.1| putative amino acid transport protein (ABC superfamily, membrane) [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238545594|dbj|BAH61945.1| glutamate/aspartate transport system permease component [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] gi|328535745|gb|EGF62185.1| ABC transporter, permease protein [Klebsiella sp. MS 92-3] Length = 229 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 49/139 (35%), Positives = 81/139 (58%), Gaps = 10/139 (7%) Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280 LL++ +I G+P + +I + L + P+L + G TV+ +AL+ +TAA Sbjct: 63 LLFLWAEIIRGIPLIFVI---FWLWYLLPMLTGGDLPGAVTVT-------LALAWFTAAS 112 Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340 + V +GL ++P+GQ EAA+ G + RLVLLPQA+R++ P L ++ LLK++SL Sbjct: 113 VMHSVLAGLQSLPKGQYEAALTQGFAPGQTLRLVLLPQALRNVQPSLVGIFIGLLKDTSL 172 Query: 341 AVAVGFADLVSVGGTIINQ 359 A V +L +V G + N+ Sbjct: 173 AFIVNVPELTTVAGQVNNR 191 >gi|251788053|ref|YP_003002774.1| polar amino acid ABC transporter inner membrane subunit [Dickeya zeae Ech1591] gi|247536674|gb|ACT05295.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya zeae Ech1591] Length = 311 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 42/129 (32%), Positives = 75/129 (58%), Gaps = 3/129 (2%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + L+ +A+ AEI+R G++ V GQ EAA ALGL + T ++LPQA+RSI+P ++ Sbjct: 164 LGLTLVQSAYTAEIIRGGILGVDAGQFEAAAALGLPGYRRTWRIILPQALRSILPTGFNE 223 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL---IWMFIYLSLSIMIALFMNR 387 ++L K +S+ + +L I N+T Q I +++ +W + S+ ++ F+ R Sbjct: 224 IISLAKGTSVVYVLALPELFYTVQVIYNRTQQVIPLLMVATVWYLVITSVLSVLQYFVER 283 Query: 388 LNAKIALKE 396 A+ A++E Sbjct: 284 YVARGAVRE 292 >gi|325686600|gb|EGD28626.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK72] gi|327462743|gb|EGF09065.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK1057] Length = 230 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 40/122 (32%), Positives = 73/122 (59%), Gaps = 2/122 (1%) Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 AA IAE+ ++ +AVP+GQ EA +++GLT + ++LPQA R +P LT+ LNL+++ Sbjct: 109 AAMIAEVFKAAYLAVPKGQTEAGLSIGLTPAQTFLRIVLPQAFRIALPNLTTALLNLMRD 168 Query: 338 SSLAVAVGFADLVSVGGTII--NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395 ++LA +G D++ G +I N ++E IY ++++++L L + +K Sbjct: 169 AALAYTIGAVDVMGAGQNLISRNLGNYSLETYTAVALIYWGIALVVSLASQLLEKSLTVK 228 Query: 396 EK 397 E+ Sbjct: 229 ER 230 >gi|255019253|ref|ZP_05291379.1| amino acid ABC transporter, permease protein [Listeria monocytogenes FSL F2-515] Length = 173 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 39/122 (31%), Positives = 75/122 (61%), Gaps = 1/122 (0%) Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327 +++IA AA+ AEI R G +++ GQ E+A LGLT+ + R ++LPQ ++ ++P + Sbjct: 44 AVFIAFILNYAAYFAEIFRGGFLSIENGQYESAKVLGLTYGQTLRKIVLPQVVKRVLPAI 103 Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387 ++ +NL+K+SSL +G DL+ G +++ I ++L+ IYL+L+ ++ + + Sbjct: 104 GNEVINLVKDSSLVYILGIGDLLRAGKIAMSRDVTLIPLVLVAA-IYLALTAILTVLFKQ 162 Query: 388 LN 389 L Sbjct: 163 LE 164 >gi|87122516|ref|ZP_01078395.1| ABC basic amino acid transporter, inner membrane subunit [Marinomonas sp. MED121] gi|86162158|gb|EAQ63444.1| ABC basic amino acid transporter, inner membrane subunit [Marinomonas sp. MED121] Length = 223 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 67/202 (33%), Positives = 100/202 (49%), Gaps = 14/202 (6%) Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247 ++ S VLG + +L L+R LP YI F G P LV I L Y Sbjct: 9 QLIFLSVVLGGIFAL-PIALARISKNPLISGLPFAYI--FFFRGTPLLVQIFLVYYGA-- 63 Query: 248 KPVLGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 QF + S + P F IA + T+A+ AEI R + A+P G++EA + Sbjct: 64 ----SQFEVVRESFLWPILREPFWCAIIAFTLNTSAYTAEIFRGAIQAIPVGEVEACKVV 119 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363 G+T + R +LLP+A ++P ++ + +LK S+LA + DL + TII +T Sbjct: 120 GMTKVQMYRRILLPRAFGIVLPAYGNEIILMLKGSALASTITILDLTGMARTIIARTYTP 179 Query: 364 IEIILIWMFIYLSLS-IMIALF 384 IEI L IYL +S ++IA+F Sbjct: 180 IEIFLAAGAIYLVISMVVIAIF 201 >gi|47564802|ref|ZP_00235846.1| amino acid ABC transporter, permease protein [Bacillus cereus G9241] gi|47558175|gb|EAL16499.1| amino acid ABC transporter, permease protein [Bacillus cereus G9241] Length = 226 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 49/157 (31%), Positives = 92/157 (58%), Gaps = 14/157 (8%) Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244 T + + +F++GI+L+ T L+R + + + +Y+S +I G P LV + + + Sbjct: 27 TTIPLTLITFIIGIILATL-TALARISGSRILQWIARIYVS--IIRGTPLLVQL---FII 80 Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304 + P L V P + + I S A+ +EI+R+ ++++P+GQ EAA +G Sbjct: 81 FYGLPTLN-------VEVEP-YTAAVIGFSLNVGAYASEIIRASILSIPKGQWEAAYTIG 132 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341 +T+ +A + V+LPQA R IPPL++ +++L+K++SLA Sbjct: 133 MTYPQALKRVILPQATRVSIPPLSNTFISLVKDTSLA 169 Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust. Identities = 15/41 (36%), Positives = 26/41 (63%) Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 I+ TL R+S ++++ WI R+YV + R P LV +F ++ Sbjct: 41 ILATLTALARISGSRILQWIARIYVSIIRGTPLLVQLFIIF 81 >gi|116617559|ref|YP_817930.1| ABC-type amino acid transport system, permease and periplasmic component [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] gi|116096406|gb|ABJ61557.1| amino acid ABC transporter membrane protein, PAAT family / amino acid ABC transporter substrate-binding protein, PAAT family [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] Length = 481 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 42/150 (28%), Positives = 73/150 (48%), Gaps = 23/150 (15%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 + LPL+ ++ F+ GLP ++ T P F + I L Sbjct: 328 RGLPLMVLAFFIYIGLPGVI-----------------------GTKIPAFTAGLITLILN 364 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 A+ VR G AV +GQMEAA +LG T+ ++ R V++PQ ++ ++P +Q++ LK Sbjct: 365 EGAYTGAFVRGGFEAVDKGQMEAARSLGFTYNRSMRKVIMPQGLKIMVPSFINQFIITLK 424 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 ++S+ A+G +L G I+ + Q + Sbjct: 425 DTSILSAIGILELTQTGTLIVARNSQGFRV 454 >gi|300781314|ref|ZP_07091168.1| ABC superfamily ATP binding cassette transporter, permease protein [Corynebacterium genitalium ATCC 33030] gi|300533021|gb|EFK54082.1| ABC superfamily ATP binding cassette transporter, permease protein [Corynebacterium genitalium ATCC 33030] Length = 305 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 39/85 (45%), Positives = 56/85 (65%) Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322 S F + L A ++AEIVRSG+ +VP GQ+EA+ ALG+ R +LPQAMR Sbjct: 142 SSAFALAVLGLGLNEAGYMAEIVRSGINSVPEGQIEASKALGMGWGMTMRRTVLPQAMRI 201 Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFA 347 IIPP +++++LLK SSL VA+ ++ Sbjct: 202 IIPPTGNEFISLLKTSSLVVAIPYS 226 >gi|238024355|ref|YP_002908587.1| polar amino acid family ABC transporter inner membrane subunit [Burkholderia glumae BGR1] gi|237879020|gb|ACR31352.1| ABC polar amino acid family transporter, inner membrane subunit [Burkholderia glumae BGR1] Length = 218 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 59/200 (29%), Positives = 107/200 (53%), Gaps = 20/200 (10%) Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240 LT+ V S +LG+V +L ++SRH + A + ++ GLP +VL+ Sbjct: 19 LTVFITISCLVLSTMLGLVWALL--KMSRHAPVRRAAATLI-----NVVRGLPMIVLL-- 69 Query: 241 KYQLHFDKPVLG-QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299 + ++F P +G Q + + S V L+ + ++AEI+RSG+ +V GQ EA Sbjct: 70 -FYIYFVLPSIGLQMSALQASIV---------GLAFGYSTYVAEIIRSGIESVDPGQYEA 119 Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359 A ++G+ K V+LPQA++ +PP ++ +++LK+SSLA + +++ G I Sbjct: 120 AQSIGMGRVKTMTRVILPQAIKVALPPYSNTLVSMLKDSSLASTITVSEMTRQGSLIAAA 179 Query: 360 TGQAIEIILIWMFIYLSLSI 379 T Q +E+ + YL++S+ Sbjct: 180 TFQNLEVYTLVAIGYLAMSL 199 >gi|209552183|ref|YP_002284099.1| polar amino acid ABC transporter inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209539776|gb|ACI59707.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 216 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 48/168 (28%), Positives = 90/168 (53%), Gaps = 11/168 (6%) Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290 G+P LV++ Y ++F P QF + + S +AL F+A++ ++G++ Sbjct: 60 GIPALVML---YIVYFGLP---QFEVVMDAIPSAS-----VALGISMGGFLADVFKAGIL 108 Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 A+P GQ EAA ALGL+ A V+LPQ +R + PP+ ++ + ++LA + +L+ Sbjct: 109 AIPLGQREAAAALGLSRSTAFTRVILPQTIRIVTPPVLGYVISYFQATALAYTIAVPELM 168 Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 S T+ + +E++ + F+Y + I A ++NRL+ + + K Sbjct: 169 SRSYTVAADNFRFLEVLTMAGFLYAVICIPSARWVNRLSNRDEFESKH 216 >gi|325685428|gb|EGD27529.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus delbrueckii subsp. lactis DSM 20072] Length = 213 Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 57/182 (31%), Positives = 94/182 (51%), Gaps = 21/182 (11%) Query: 228 LIFGLPTLVLIA---------LKYQLHF------DKPVLGQ--FNFIGGSTVS---PEFM 267 LIF LP +L++ LK+ L+F P+L Q F F G V P +M Sbjct: 26 LIFSLPLGILVSFGLSSRFAPLKWLLNFYVWLMRGTPLLLQLIFVFYGLPIVGLTFPRYM 85 Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327 + +A A+ AEI R G A+ RGQ EAA L LT+ + R +++PQ ++ ++P + Sbjct: 86 AALVAFVLNYTAYFAEIFRGGNQAIDRGQFEAAKVLQLTYGQTLRKIVIPQVIKIVLPSI 145 Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387 ++ +NL+K+SSL +G DL+ G + + ++L+ + IYL L + L + + Sbjct: 146 GNEVINLVKDSSLVYVIGLGDLLRAGNLATARDVTLVPLVLVAL-IYLFLIGLCTLLLRQ 204 Query: 388 LN 389 L Sbjct: 205 LE 206 >gi|325479869|gb|EGC82954.1| ABC transporter, permease protein [Anaerococcus prevotii ACS-065-V-Col13] Length = 491 Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 41/122 (33%), Positives = 74/122 (60%), Gaps = 4/122 (3%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I+ + ++A++AE+ R G+ +V +G+ EAA +LGL++ + R V++PQA+++ +P L ++ Sbjct: 367 ISFALNSSAYMAELFRGGINSVSKGEKEAARSLGLSNLQTMRKVVMPQAIKNSLPALGNE 426 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 + L K +S+A +G ADL +I+QT A IYL +I +FM +L Sbjct: 427 IITLFKETSIAGFIGLADLTRGASIVISQTFDAATAYFSAAIIYL----VIVMFMEKLFK 482 Query: 391 KI 392 K+ Sbjct: 483 KL 484 >gi|288936938|ref|YP_003440997.1| binding-protein-dependent transporters inner membrane component [Klebsiella variicola At-22] gi|288891647|gb|ADC59965.1| binding-protein-dependent transport systems inner membrane component [Klebsiella variicola At-22] Length = 229 Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 49/139 (35%), Positives = 81/139 (58%), Gaps = 10/139 (7%) Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280 LL++ +I G+P + +I + L + P+L + G TV+ +AL+ +TAA Sbjct: 63 LLFLWAEIIRGIPLIFVI---FWLWYLLPMLTGGDLPGAVTVT-------LALAWFTAAS 112 Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340 + V +GL ++P+GQ EAA+ G + RLVLLPQA+R++ P L ++ LLK++SL Sbjct: 113 VMHSVLAGLQSLPKGQYEAALTQGFAPGQTLRLVLLPQALRNVQPSLVGIFIGLLKDTSL 172 Query: 341 AVAVGFADLVSVGGTIINQ 359 A V +L +V G + N+ Sbjct: 173 AFIVNVPELTTVAGQVNNR 191 >gi|262042354|ref|ZP_06015516.1| ABC superfamily ATP binding cassette transporter, membrane protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|259040262|gb|EEW41371.1| ABC superfamily ATP binding cassette transporter, membrane protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 202 Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 50/139 (35%), Positives = 81/139 (58%), Gaps = 10/139 (7%) Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280 LL++ +I G+P LI + + L + P+L + G TV+ +AL+ +TAA Sbjct: 36 LLFLWAEIIRGIP---LIFVIFWLWYLLPMLTGGDLPGAVTVT-------LALAWFTAAS 85 Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340 + V +GL ++P+GQ EAA+ G + RLVLLPQA+R++ P L ++ LLK++SL Sbjct: 86 VMHSVLAGLQSLPKGQYEAALTQGFAPGQTLRLVLLPQALRNVQPSLVGIFIGLLKDTSL 145 Query: 341 AVAVGFADLVSVGGTIINQ 359 A V +L +V G + N+ Sbjct: 146 AFIVNVPELTTVAGQVNNR 164 >gi|123444013|ref|YP_001007983.1| ABC transporter permease [Yersinia enterocolitica subsp. enterocolitica 8081] gi|122090974|emb|CAL13857.1| Putative ABC transporter permease protein [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 369 Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 35/81 (43%), Positives = 56/81 (69%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + + + +A++AE+VR GL A+P+GQ EAA +LGL + K LV+LPQA++ +IP L + Sbjct: 238 VGVVLFQSAYVAEVVRGGLQALPKGQTEAAESLGLGYWKTQGLVILPQALKMVIPGLVNT 297 Query: 331 YLNLLKNSSLAVAVGFADLVS 351 + L K++SL + +G DL S Sbjct: 298 IIALFKDTSLVIIIGLFDLFS 318 >gi|33863166|ref|NP_894726.1| ABC transporter for amino acids, membrane component [Prochlorococcus marinus str. MIT 9313] gi|33635083|emb|CAE21069.1| ABC transporter for amino acids, membrane component [Prochlorococcus marinus str. MIT 9313] Length = 327 Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 41/117 (35%), Positives = 72/117 (61%), Gaps = 3/117 (2%) Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339 +IAE VR GL A+PR Q EAA LGL+ ++ +LV+LPQA+R+ +P LT+Q + LL+N+S Sbjct: 202 YIAEDVRGGLQAIPRTQREAAAVLGLSPKQIIQLVVLPQALRTALPALTNQAVGLLQNTS 261 Query: 340 LAVAVGFADLVSVGGTIINQT---GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393 L +G +L+ + +++ G+ +E+ + +Y + +AL L +++ Sbjct: 262 LMAILGLVELLGISRSLLANPDFIGRYLEVYVWLAGVYWLVCTAMALLARHLEHQLS 318 >gi|329922570|ref|ZP_08278145.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC [Paenibacillus sp. HGF5] gi|328942114|gb|EGG38396.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC [Paenibacillus sp. HGF5] Length = 217 Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 68/226 (30%), Positives = 117/226 (51%), Gaps = 22/226 (9%) Query: 173 NRGLSF-PTLTMDTNAKIFV--FSFVLGIVLSLFA--TRLSRHFHEKTGKALPLLYISTF 227 N + F PTL I V FS +L IV+S A RLS+ + +T ++Y+ F Sbjct: 3 NSWIDFLPTLLKGAEITIIVAFFSAILAIVMSFAAGLCRLSKLWIVRTAT---VVYVEVF 59 Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287 T +L+ L + L+F P FIG P+ ++ +A+ A+ +EIVRS Sbjct: 60 R----GTSLLVQL-FWLYFALP------FIGIEL--PKMLAAILAIGLNFGAYGSEIVRS 106 Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347 ++AVP+GQ EAA+AL + + V+LPQA ++PP +Q + L+K++SL + A Sbjct: 107 AVLAVPKGQWEAAVALNMRPWQRLWNVILPQASLRMLPPFGNQLVELIKSTSLVYFITMA 166 Query: 348 DLVSVGGTIINQ-TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 DL + N EI+++ + +Y ++ ++++ + L K+ Sbjct: 167 DLTYQAMVLRNNYISWTTEILVLLLLMYFVIATLVSMAVRLLERKL 212 >gi|314934022|ref|ZP_07841387.1| amino acid ABC transporter, permease/substrate-binding protein [Staphylococcus caprae C87] gi|313654172|gb|EFS17929.1| amino acid ABC transporter, permease/substrate-binding protein [Staphylococcus caprae C87] Length = 485 Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 33/80 (41%), Positives = 60/80 (75%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IAL ++A+IAEI+R+G+ AV +GQMEAA +LGL + + + V++PQA+++I+P L ++ Sbjct: 360 IALIINSSAYIAEIIRAGINAVDKGQMEAARSLGLNYIQTMKSVIMPQAIKNILPALGNE 419 Query: 331 YLNLLKNSSLAVAVGFADLV 350 ++ L+K SS+ +G +++ Sbjct: 420 FVTLIKESSIVSTIGVGEIM 439 Score = 40.0 bits (92), Expect = 0.60, Method: Compositional matrix adjust. Identities = 17/67 (25%), Positives = 37/67 (55%) Query: 83 SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142 + Y + + G NT ++ G+I +I+G + +++ K ++W+ +Y+E R P L Sbjct: 275 TKYGSFFIKGIKNTILISLVGVILGSILGAFIALLKINKFKPLSWLASIYIEFLRGTPML 334 Query: 143 VVIFFLY 149 V +F ++ Sbjct: 335 VQVFIVF 341 >gi|312976992|ref|ZP_07788741.1| amino acid ABC transporter, amino acid-binding/permease protein, His/Glu/Gln/Arg/opine family [Lactobacillus crispatus CTV-05] gi|310896320|gb|EFQ45385.1| amino acid ABC transporter, amino acid-binding/permease protein, His/Glu/Gln/Arg/opine family [Lactobacillus crispatus CTV-05] Length = 537 Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 41/116 (35%), Positives = 72/116 (62%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I +S T A++AE++R G+I+ P GQ EAA ALG+TH + ++L QA+R+ +P +T++ Sbjct: 391 IIVSINTGAYLAEVIRGGIISTPEGQFEAASALGMTHNQRMWHIILLQAIRNCLPSITNE 450 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386 ++ +K++S+ + ++L VG TI +Q+ + L+ IYL L+ I N Sbjct: 451 FIVNIKDTSVLSIISVSELFFVGTTIASQSFKFFPTYLMISAIYLILTFTITRIFN 506 Score = 37.0 bits (84), Expect = 5.3, Method: Compositional matrix adjust. Identities = 29/93 (31%), Positives = 39/93 (41%), Gaps = 10/93 (10%) Query: 67 RAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVG----------A 116 +AG E + T+ Y I+ G T LA G I IG LVG Sbjct: 280 KAGNETKKENWLVTTWKQYGGMIMSGIGMTLLLALVGTIVGFFIGLLVGIIRTIPTPTTR 339 Query: 117 GRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 G+ +V W+ VYVE+FR P +V +Y Sbjct: 340 GKRWTLNVVKWLLSVYVEIFRGTPMMVQAAVIY 372 >gi|307319174|ref|ZP_07598604.1| polar amino acid ABC transporter, inner membrane subunit [Sinorhizobium meliloti AK83] gi|306895281|gb|EFN26037.1| polar amino acid ABC transporter, inner membrane subunit [Sinorhizobium meliloti AK83] Length = 218 Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 42/102 (41%), Positives = 63/102 (61%), Gaps = 1/102 (0%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G ++P +++ IAL+ + +AF+ EI R + AVP+GQ EAA ALGL + ++ R V+LPQ Sbjct: 80 GFAINP-WIAATIALALHASAFLGEIWRGCIEAVPKGQREAATALGLRYFRSMRHVILPQ 138 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 A R + P + L+K +SLA +GF +L G I N T Sbjct: 139 AARIAVAPTVGFLVQLIKGTSLASIIGFTELTRQGQIINNAT 180 >gi|269214286|ref|ZP_06158476.1| L-cystine ABC transporter, permease protein [Neisseria lactamica ATCC 23970] gi|269210117|gb|EEZ76572.1| L-cystine ABC transporter, permease protein [Neisseria lactamica ATCC 23970] Length = 227 Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 36/121 (29%), Positives = 67/121 (55%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I S A+ +E +R+ +++VP+GQ EA ++G+T+ + R ++ PQA R +PPL+++ Sbjct: 100 IGFSLNVGAYASETIRAAILSVPKGQWEAGFSIGMTYMQTFRRIVAPQAFRVAVPPLSNE 159 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++ L KN+SLA V +L V N+T + + + +Y ++ L RL Sbjct: 160 FIGLFKNTSLAAVVTVTELFRVAQETANRTYDFLPVYIEAALVYWCFCKVLFLIQARLEK 219 Query: 391 K 391 + Sbjct: 220 R 220 >gi|183980096|ref|YP_001848387.1| ABC transporter permease protein GlnQ [Mycobacterium marinum M] gi|183173422|gb|ACC38532.1| ABC transporter permease protein GlnQ [Mycobacterium marinum M] Length = 589 Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 55/169 (32%), Positives = 92/169 (54%), Gaps = 13/169 (7%) Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285 T + GLP +V+I + LG +GG T + + AL A++ EI+ Sbjct: 403 TDIFRGLPEVVIILIIG--------LGVGPIVGGLTNNNPYPLGIAALGLMAGAYVGEIL 454 Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345 RSG+ +V GQ+EA+ ALG ++ A RLV++PQ +R ++P L +Q++ LLK S+L +G Sbjct: 455 RSGIQSVDPGQLEASRALGFSYSAAMRLVVVPQGVRRVLPALVNQFIALLKASALVYFLG 514 Query: 346 F----ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 +L VG + QTG ++ +F YL L++ + +N ++A Sbjct: 515 LIAQQRELFQVGRDLNAQTGNLSPLVAAGIF-YLMLTVPLTHLVNYIDA 562 >gi|118470254|ref|YP_890525.1| glutamine-binding periplasmic protein/glutamine transporter permease [Mycobacterium smegmatis str. MC2 155] gi|118171541|gb|ABK72437.1| glutamine-binding periplasmic protein/glutamine transport system permease protein [Mycobacterium smegmatis str. MC2 155] Length = 475 Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 52/151 (34%), Positives = 87/151 (57%), Gaps = 14/151 (9%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 + SF +G+V++L L+R + LYIS +I G P LV + L + Sbjct: 282 IISFAIGLVIAL-GVALARLSSNAVLSNVARLYIS--IIRGTPLLVQLFLVFY------A 332 Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 L +F G + P F + IA S + AEI+R+ ++++P+GQ EAA +GLT+ K+ Sbjct: 333 LPEF----GVRIDP-FPAAVIAFSLNVGGYAAEIIRAAILSIPKGQWEAAETIGLTYGKS 387 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341 + ++LPQA R +PPL++ ++L+K++SLA Sbjct: 388 LQRIILPQAARVAVPPLSNTLISLVKDTSLA 418 >gi|99080137|ref|YP_612291.1| amino acid ABC transporter permease [Ruegeria sp. TM1040] gi|99036417|gb|ABF63029.1| Amino acid ABC transporter permease protein 3-TM region His/Glu/Gln/Arg/opine [Ruegeria sp. TM1040] Length = 442 Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 30/82 (36%), Positives = 58/82 (70%) Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326 M ++I ++ + +A++AE++R GL A+P+GQ E A +LGL + +A RL+++PQA++ IP Sbjct: 309 MRVFIMVTLFASAYMAEVIRGGLAALPKGQYEGADSLGLNYWQAQRLIIMPQALKISIPG 368 Query: 327 LTSQYLNLLKNSSLAVAVGFAD 348 + S ++ + K+++L +G D Sbjct: 369 IVSTFIGVFKDTTLVSVIGLFD 390 >gi|330890819|gb|EGH23480.1| amino acid ABC transporter permease [Pseudomonas syringae pv. mori str. 301020] Length = 220 Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 42/129 (32%), Positives = 73/129 (56%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + I L+ + + ++EIVR L A+P GQ+EA A+GL ++ R VLLPQAMR I+P Sbjct: 91 FQAGAIGLTLFCGSHVSEIVRGALQAIPAGQLEAGKAIGLRFNQSLRYVLLPQAMRQILP 150 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 + ++K S+L +G A+L+ +I +T +E L F++ ++ I + Sbjct: 151 TWVNSSTEIVKASTLLSVIGVAELLLSTQQVIARTFMTLEFYLFAGFLFFLINYAIEILG 210 Query: 386 NRLNAKIAL 394 ++ ++AL Sbjct: 211 RQIEKRVAL 219 >gi|254224690|ref|ZP_04918306.1| amino acid ABC transporter, permease protein [Vibrio cholerae V51] gi|125622753|gb|EAZ51071.1| amino acid ABC transporter, permease protein [Vibrio cholerae V51] Length = 266 Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 52/158 (32%), Positives = 84/158 (53%), Gaps = 14/158 (8%) Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268 R G+AL YI+ ++ P LV I L Y + PV+G F + Sbjct: 90 RQSRSLVGRALGTGYIA--VVRNTPLLVQIYLLYFVF--GPVIG----------LDRFAT 135 Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328 +AL+ + A+ AE+ R GL ++ +GQ EAA +LGL+ V+LPQ ++ +PPLT Sbjct: 136 AVLALALFQGAYTAEVFRGGLNSIAQGQYEAARSLGLSRFFTFYDVILPQLLQRTLPPLT 195 Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 ++ ++L+KNSS+ + DL + G I+++T EI Sbjct: 196 NEMVSLIKNSSIVSVMAIFDLTTQGRNIVSETAMPFEI 233 >gi|56697502|ref|YP_167870.1| glutamate/aspartate ABC transporter, permease protein [Ruegeria pomeroyi DSS-3] gi|56679239|gb|AAV95905.1| glutamate/aspartate ABC transporter, permease protein [Ruegeria pomeroyi DSS-3] Length = 218 Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 43/129 (33%), Positives = 73/129 (56%), Gaps = 1/129 (0%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F S IA + AA+ +EI+R+G+ +V +GQ+ A A GL + + R V+LPQA R+++P Sbjct: 90 FYSALIAFVMFEAAYYSEIIRAGIQSVRQGQVHAGQATGLNYWQIQRYVVLPQAFRNMVP 149 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 L +Q + L +++SL V D ++V + G+ E+ + +Y + +LF+ Sbjct: 150 ILVTQGIILFQDTSLVFVVSLRDFMTVSSIVARTEGRLAEMYVFAALVYFVICFAGSLFV 209 Query: 386 NRLN-AKIA 393 RL AK A Sbjct: 210 RRLQKAKTA 218 >gi|312142894|ref|YP_003994340.1| polar amino acid ABC transporter, inner membrane subunit [Halanaerobium sp. 'sapolanicus'] gi|311903545|gb|ADQ13986.1| polar amino acid ABC transporter, inner membrane subunit [Halanaerobium sp. 'sapolanicus'] Length = 220 Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 38/118 (32%), Positives = 71/118 (60%) Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 + A+ AE +R + +V GQ++AA++LG+T V+LPQA+R +IP T++++ ++K Sbjct: 96 SGAYQAEYLRGSIQSVSSGQLKAALSLGMTKWMGIIYVVLPQALRRVIPAWTNEFIYMIK 155 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394 SSLA +G +L++ G I ++ Q + ++ IYL + I+ N+ K+A+ Sbjct: 156 YSSLAYVIGAKELMTEGKLIASRNYQFFNVYMVVALIYLVVIIIFVYLFNKFEKKVAI 213 >gi|256855202|ref|ZP_05560563.1| amino acid ABC transporter [Enterococcus faecalis T8] gi|300862178|ref|ZP_07108258.1| ABC transporter, permease protein [Enterococcus faecalis TUSoD Ef11] gi|256709715|gb|EEU24762.1| amino acid ABC transporter [Enterococcus faecalis T8] gi|295112535|emb|CBL31172.1| amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-)/amino acid ABC transporter membrane protein, PAAT family (TC 3.A.1.3.-) [Enterococcus sp. 7L76] gi|300848703|gb|EFK76460.1| ABC transporter, permease protein [Enterococcus faecalis TUSoD Ef11] Length = 527 Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 63/225 (28%), Positives = 108/225 (48%), Gaps = 36/225 (16%) Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRH-----FHEKTGKALPLLY 223 MFL GL+ + T V LG+++ +F T F +K G + +Y Sbjct: 297 MFLRGAGLTLFIALIGT-----VVGTTLGLLIGVFRTIPDSENPVARFFQKLGNLILSIY 351 Query: 224 ISTFLIFGLPTLVL-------IALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 I F G P +V +AL + + D+ V +L+I +S Sbjct: 352 IEVFR--GTPMMVQAMVIFYGLALAFGISLDRTV----------------AALFI-VSVN 392 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 T A+++EIVR G+ AV +GQ EAA A+G+TH + R V++PQ +R+I+P ++++ +K Sbjct: 393 TGAYMSEIVRGGIFAVDKGQFEAAQAIGMTHGQTMRKVVIPQVLRNILPATGNEFVINIK 452 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 ++++ +G ADL G Q + I +YL ++ +I Sbjct: 453 DTAVLSVIGVADLFFQGNAASGANFQFFQTFTIVGIMYLVMTFVI 497 >gi|183598313|ref|ZP_02959806.1| hypothetical protein PROSTU_01703 [Providencia stuartii ATCC 25827] gi|188020487|gb|EDU58527.1| hypothetical protein PROSTU_01703 [Providencia stuartii ATCC 25827] Length = 246 Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 57/195 (29%), Positives = 98/195 (50%), Gaps = 21/195 (10%) Query: 217 KALPLLYISTFLIFGLPTLVLI---ALKYQLHFDKPVL-----------GQFNFIGGSTV 262 + LP L + F+ FG L+ I ++ L F + L G+F+F Sbjct: 55 RGLPELLVVLFVYFGTLQLINILGDGIEINLGFWQTTLQIDPSIFFADSGEFDF------ 108 Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322 +P F +AL+ A++ ++ +R L AVP GQ EA +ALGLT R ++PQ R Sbjct: 109 TP-FACGVVALALLYASYASQTLRGALKAVPYGQWEAGLALGLTKRTIFFRFIMPQMWRH 167 Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382 +P L +Q+L LLK+++L + DL+ TI+N+T + I IYL+++++ Sbjct: 168 ALPGLGNQWLVLLKDTALVSLISVNDLMLQTKTIVNRTHEPFTWYAIVGLIYLAITLLSQ 227 Query: 383 LFMNRLNAKIALKEK 397 + + R+ + E+ Sbjct: 228 VILKRIELRTTRFER 242 >gi|222480217|ref|YP_002566454.1| polar amino acid ABC transporter, inner membrane subunit [Halorubrum lacusprofundi ATCC 49239] gi|222453119|gb|ACM57384.1| polar amino acid ABC transporter, inner membrane subunit [Halorubrum lacusprofundi ATCC 49239] Length = 267 Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 46/147 (31%), Positives = 86/147 (58%), Gaps = 2/147 (1%) Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312 Q N +G +++S + + L +AA+ ++I R+ L +V GQ+EA ++GL+ +A R Sbjct: 120 QIN-LGVASISSAMTAGILGLGLRSAAYQSQIFRATLSSVDDGQLEAGRSIGLSRFEAVR 178 Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN-QTGQAIEIILIWM 371 V++PQA+R IP +++ +LK++S+ A+G A+L++ G + + QT +E+IL Sbjct: 179 YVVVPQALRRSIPGFQNEFTIVLKDTSIVFAIGLAELLTRGYDLFSEQTTAVLEVILFIS 238 Query: 372 FIYLSLSIMIALFMNRLNAKIALKEKK 398 IY L+ ++RL A+ E + Sbjct: 239 AIYFVLTFTTNRALDRLGDYYAIPEGE 265 >gi|259416339|ref|ZP_05740259.1| glutamate/glutamine/aspartate/asparagine transport system permeaseprotein BztC [Silicibacter sp. TrichCH4B] gi|259347778|gb|EEW59555.1| glutamate/glutamine/aspartate/asparagine transport system permeaseprotein BztC [Silicibacter sp. TrichCH4B] Length = 442 Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 30/82 (36%), Positives = 58/82 (70%) Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326 M ++I ++ + +A++AE++R GL A+P+GQ E A +LGL + +A RL+++PQA++ IP Sbjct: 309 MRVFIMVTLFASAYMAEVIRGGLAALPKGQYEGADSLGLNYWQAQRLIIMPQALKISIPG 368 Query: 327 LTSQYLNLLKNSSLAVAVGFAD 348 + S ++ + K+++L +G D Sbjct: 369 IVSTFIGVFKDTTLVSVIGLFD 390 >gi|257421538|ref|ZP_05598528.1| ABC amino acid transporter [Enterococcus faecalis X98] gi|294779326|ref|ZP_06744729.1| ABC transporter, permease protein [Enterococcus faecalis PC1.1] gi|257163362|gb|EEU93322.1| ABC amino acid transporter [Enterococcus faecalis X98] gi|294453612|gb|EFG22011.1| ABC transporter, permease protein [Enterococcus faecalis PC1.1] gi|323479461|gb|ADX78900.1| amino acid permease ABC transporter protein [Enterococcus faecalis 62] Length = 527 Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 63/225 (28%), Positives = 108/225 (48%), Gaps = 36/225 (16%) Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRH-----FHEKTGKALPLLY 223 MFL GL+ + T V LG+++ +F T F +K G + +Y Sbjct: 297 MFLRGAGLTLFIALIGT-----VVGTTLGLLIGVFRTIPDSENPVARFFQKLGNLILSIY 351 Query: 224 ISTFLIFGLPTLVL-------IALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 I F G P +V +AL + + D+ V +L+I +S Sbjct: 352 IEVFR--GTPMMVQAMVIFYGLALAFGISLDRTV----------------AALFI-VSVN 392 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 T A+++EIVR G+ AV +GQ EAA A+G+TH + R V++PQ +R+I+P ++++ +K Sbjct: 393 TGAYMSEIVRGGIFAVDKGQFEAAQAIGMTHGQTMRKVVIPQVLRNILPATGNEFVINIK 452 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 ++++ +G ADL G Q + I +YL ++ +I Sbjct: 453 DTAVLSVIGVADLFFQGNAASGANFQFFQTFTIVGIMYLVMTFVI 497 >gi|222081207|ref|YP_002540570.1| amino acid ABC transporter [Agrobacterium radiobacter K84] gi|221725886|gb|ACM28975.1| amino acid ABC transporter [Agrobacterium radiobacter K84] Length = 252 Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 69/208 (33%), Positives = 111/208 (53%), Gaps = 30/208 (14%) Query: 158 IPDHSIVLPFGMFLNNR--GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKT 215 I D+ ++L G + N GL+ TL + A F F F I+L+L RLS+ Sbjct: 9 IHDYWLLLLVGQYPNGPIGGLA-ATLILSILAIAFAFPF--SILLAL--ARLSKS----- 58 Query: 216 GKALPLL-YISTFLIF---GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYI 271 PLL + T L++ G+P L+LI Y F P++ G+ V P F+++ + Sbjct: 59 ----PLLNWPVTALVYFTRGVPLLMLILWGY---FLVPLMT------GADV-PSFVTMLV 104 Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 L Y F++E+VR G++A+ GQ+EAA ALG ++ A R V+LPQA+ ++IP + S Sbjct: 105 TLVVYQGVFLSEVVRGGILALGHGQLEAARALGHSYFGAMRYVVLPQALYNVIPSILSVL 164 Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQ 359 ++ +K+++L + DL I NQ Sbjct: 165 VSTIKDTTLGYVINVPDLTFAANQINNQ 192 >gi|166032742|ref|ZP_02235571.1| hypothetical protein DORFOR_02457 [Dorea formicigenerans ATCC 27755] gi|166027099|gb|EDR45856.1| hypothetical protein DORFOR_02457 [Dorea formicigenerans ATCC 27755] Length = 236 Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 58/216 (26%), Positives = 114/216 (52%), Gaps = 13/216 (6%) Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248 I + S V G+++ F L+R+F + K + +YIS I G PT+V + L Y + Sbjct: 27 ITIASCVAGLIVGFFIA-LARYFEVRVLKTVAKVYIS--FIRGTPTMVQLVLVY---YGI 80 Query: 249 PVLGQ-FNFIGGST-----VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302 P+L + N G++ + P ++ I L AA+++EI+RS L++V GQ+EA + Sbjct: 81 PILLRVMNEAWGTSFDINGIHPVVFAI-ITLGLNAAAYMSEIIRSALMSVDEGQVEACYS 139 Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362 L +T +A V++PQA +P L + +++LLK +SL + D+++ + ++ + Sbjct: 140 LNMTKWQALISVVIPQAFVVALPSLGNNFISLLKETSLVFNIAVVDIMAQARIVGARSYR 199 Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 E+ + IY +++ + ++ + KE++ Sbjct: 200 YFEVYIAVSLIYWVCCMLLERLLAKIETYVRRKERR 235 >gi|254229167|ref|ZP_04922586.1| ABC transporter, permease protein, putative [Vibrio sp. Ex25] gi|262395517|ref|YP_003287370.1| amino acid ABC transporter permease protein [Vibrio sp. Ex25] gi|151938252|gb|EDN57091.1| ABC transporter, permease protein, putative [Vibrio sp. Ex25] gi|262339111|gb|ACY52905.1| amino acid ABC transporter permease protein [Vibrio sp. Ex25] Length = 306 Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 38/115 (33%), Positives = 68/115 (59%) Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 ++A++AE+VR+GL ++ +GQ EAA +LGL+ R V+ PQ +++I P L Q ++L+K Sbjct: 186 SSAYVAEVVRAGLQSIDQGQWEAADSLGLSRWVKYRFVIAPQVLKAITPALAGQTISLVK 245 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 ++S+ + ++ VG + N +G EI LI Y + ++L + AK Sbjct: 246 DTSIVSLISIQEMTFVGTEMANSSGYIFEIWLIVGIAYFLICFGLSLIFRHIEAK 300 >gi|329944505|ref|ZP_08292670.1| ABC transporter, permease protein [Actinomyces sp. oral taxon 170 str. F0386] gi|328530270|gb|EGF57149.1| ABC transporter, permease protein [Actinomyces sp. oral taxon 170 str. F0386] Length = 291 Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 40/99 (40%), Positives = 65/99 (65%), Gaps = 1/99 (1%) Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320 TVS +F L + + T+A AE+ RSG+ A+ RGQ EAA+ALG++ RL+L PQA+ Sbjct: 154 TVS-DFWKLALPIVMCTSATTAEVFRSGVRALDRGQTEAAVALGMSGSLTMRLILAPQAL 212 Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359 R ++P L +Q + ++K ++LA + + +L+ G T+I Q Sbjct: 213 RLMLPTLITQMVTIIKGTTLAYVLAYPELMYRGSTVIGQ 251 >gi|302189421|ref|ZP_07266094.1| putative ABC transport system, ATP-binding protein [Pseudomonas syringae pv. syringae 642] Length = 506 Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 59/213 (27%), Positives = 104/213 (48%), Gaps = 22/213 (10%) Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST----FLIFGLPTLVLIALKYQLH 245 +V S VLG +L+L +LPL+ + +L LP LVL+ Y L Sbjct: 32 WVISIVLGFILAL-----------AKQSSLPLINLPAKAYIWLFRSLPLLVLLIFVYNLP 80 Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305 P + ++ F + IA+ A++AEI R GL+++ +GQ EAA ALGL Sbjct: 81 QAVPA-------TSAVLANPFWAGLIAMVMCETAYVAEIHRGGLLSIAKGQTEAARALGL 133 Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365 +++PQA+R +P LT++Y++++K SSL + +++ VG + +Q +E Sbjct: 134 RFVGTQWRIVIPQALRVALPSLTNEYISIVKLSSLVSVISLTEILMVGQRLYSQNFLVME 193 Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 + F Y+ + + + RL + + + K Sbjct: 194 TMAAVAFYYVLIVTVFDFLLKRLERYLDVTQHK 226 >gi|152999485|ref|YP_001365166.1| polar amino acid ABC transporter inner membrane subunit [Shewanella baltica OS185] gi|160874105|ref|YP_001553421.1| polar amino acid ABC transporter inner membrane subunit [Shewanella baltica OS195] gi|151364103|gb|ABS07103.1| polar amino acid ABC transporter, inner membrane subunit [Shewanella baltica OS185] gi|160859627|gb|ABX48161.1| polar amino acid ABC transporter, inner membrane subunit [Shewanella baltica OS195] gi|315266337|gb|ADT93190.1| polar amino acid ABC transporter, inner membrane subunit [Shewanella baltica OS678] Length = 226 Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 41/123 (33%), Positives = 76/123 (61%), Gaps = 4/123 (3%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IA + A+I+EI+R+G+ AV +GQ EAA +LGL+ + ++LPQA+++I+P L ++ Sbjct: 101 IAFGLNSGAYISEIIRAGIQAVDKGQTEAARSLGLSQAMTMKSIILPQAIKNILPALGNE 160 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA----IEIILIWMFIYLSLSIMIALFMN 386 ++ LLK +++ +G DL+ G I ++T + LI++F+ S + +++ F Sbjct: 161 FIVLLKETAVIGFIGGVDLMRAGEIIRSRTFEDSVPLFTCALIYLFLTYSFTFVLSKFEK 220 Query: 387 RLN 389 RL Sbjct: 221 RLK 223 >gi|39997744|ref|NP_953695.1| amino acid ABC transporter permease [Geobacter sulfurreducens PCA] gi|39984636|gb|AAR36022.1| amino acid ABC transporter, permease protein, putative [Geobacter sulfurreducens PCA] gi|298506680|gb|ADI85403.1| amino acid ABC transporter, membrane protein, putative [Geobacter sulfurreducens KN400] Length = 262 Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 54/181 (29%), Positives = 90/181 (49%), Gaps = 14/181 (7%) Query: 214 KTGKALPLLYISTFL---IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY 270 + + LPL Y+ I G P LV I + + + D +G +G Sbjct: 88 QRSRLLPLRYLGRIYVETIRGTPLLVQILVFFYVVADAFGVGDRYLVG-----------V 136 Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I LS + A+I+E++R+G+ +V QME+A A+GLT + R V+ PQA R +PPL Q Sbjct: 137 ITLSLFAGAYISEMIRAGIESVGDSQMESARAIGLTRAQIYRYVVFPQAFRQTLPPLAGQ 196 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 + +++K+SSL + ++ + T +E L YL++++ I+L RL Sbjct: 197 FASIVKDSSLLSIIAVSEFTLNAQEVNAFTYSTLESYLPLAIGYLAITLPISLLSRRLEK 256 Query: 391 K 391 K Sbjct: 257 K 257 >gi|163938764|ref|YP_001643648.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus weihenstephanensis KBAB4] gi|163860961|gb|ABY42020.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus weihenstephanensis KBAB4] Length = 232 Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 50/157 (31%), Positives = 92/157 (58%), Gaps = 14/157 (8%) Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244 T + + +FV+GI+L+ T L+R + + + +Y+S +I G P LV + + + Sbjct: 33 TTIPLTLITFVIGIILATL-TALARISGSRILQWIARIYVS--IIRGTPLLVQL---FII 86 Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304 + P L V P + + I S A+ +EI+R+ ++++P+GQ EAA +G Sbjct: 87 FYGLPTLN-------IEVEP-YTAAVIGFSLNVGAYASEIIRASILSIPKGQWEAAYTIG 138 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341 +T+ +A + V+LPQA R IPPL++ +++L+K++SLA Sbjct: 139 MTYPQALKRVILPQATRVSIPPLSNTFISLVKDTSLA 175 Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust. Identities = 15/41 (36%), Positives = 26/41 (63%) Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 I+ TL R+S ++++ WI R+YV + R P LV +F ++ Sbjct: 47 ILATLTALARISGSRILQWIARIYVSIIRGTPLLVQLFIIF 87 >gi|328470611|gb|EGF41522.1| amino acid ABC transporter permease [Vibrio parahaemolyticus 10329] Length = 306 Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 47/143 (32%), Positives = 78/143 (54%), Gaps = 1/143 (0%) Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291 +P L L L + + L F F G S + S + + ++A+IAE+VR+GL + Sbjct: 142 IPLLGLEDLLRNYNGEPNALQSFLF-GPSNLWENLASGVLCVGLLSSAYIAEVVRAGLQS 200 Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 + +GQ EAA +LGL+ R V+ PQ +++I P L Q ++L+K++S+ + ++ Sbjct: 201 IDQGQWEAADSLGLSRWVKYRFVIAPQVLKAITPALAGQTISLVKDTSIVSLISIQEMTF 260 Query: 352 VGGTIINQTGQAIEIILIWMFIY 374 VG + N +G EI LI F Y Sbjct: 261 VGTEMANSSGYIFEIWLIVGFSY 283 >gi|294793049|ref|ZP_06758195.1| amino acid ABC transporter, permease protein [Veillonella sp. 6_1_27] gi|294794912|ref|ZP_06760047.1| amino acid ABC transporter, permease protein [Veillonella sp. 3_1_44] gi|294454274|gb|EFG22648.1| amino acid ABC transporter, permease protein [Veillonella sp. 3_1_44] gi|294455994|gb|EFG24358.1| amino acid ABC transporter, permease protein [Veillonella sp. 6_1_27] Length = 238 Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 38/120 (31%), Positives = 67/120 (55%), Gaps = 1/120 (0%) Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 AA++ EI R G+ ++ RGQ E A LG T+ + R ++LPQ + ++PPL ++ +NLLK+ Sbjct: 120 AAYLCEIFRGGIQSISRGQYEGAKVLGFTYAQTMRKIILPQMFKRVLPPLANETINLLKD 179 Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 +SL + D++ + +I+ Q I L+ YL + ++ N L + A+ E Sbjct: 180 TSLVYVLAMNDILRITKSIV-QRDFDISAFLVAALFYLIFTFILTNIFNYLERRFAVYED 238 >gi|123444359|ref|YP_001008324.1| putative amino acid transport system permease [Yersinia enterocolitica subsp. enterocolitica 8081] gi|122091320|emb|CAL14206.1| putative amino acid transport system permease [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 251 Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 39/127 (30%), Positives = 75/127 (59%), Gaps = 1/127 (0%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 PE ++ AL+ +A++A V++G++A+ GQ +A ++LG + V+LPQA+R + Sbjct: 94 PEITTVVCALALIASAYLAHAVKAGIVAIGAGQWQAGLSLGFNRWQVLWFVILPQALRMM 153 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG-QAIEIILIWMFIYLSLSIMIA 382 +P +Q+++L+K++SLA VG +L + + N++ +E+ L +Y L + + Sbjct: 154 VPSFINQWISLIKDTSLAYIVGVNELTFLATQVNNRSMVYPMEVFLFVALVYFVLCLTLD 213 Query: 383 LFMNRLN 389 L N LN Sbjct: 214 LLANALN 220 >gi|330448490|ref|ZP_08312138.1| amino ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328492681|dbj|GAA06635.1| amino ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 310 Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 40/117 (34%), Positives = 68/117 (58%) Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312 Q+ G + + S + + AA+IAE++RSG+ A+ +GQ EAA +LGL+ R Sbjct: 166 QYFLFGDAQLWENLFSGILCIGLIAAAYIAEVIRSGIDAIAKGQWEAADSLGLSKWDRFR 225 Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369 V+ PQA+ I+P L Q+++++K+SS+ + ++ VG I N +G EI L+ Sbjct: 226 YVIFPQAIAGIVPALAGQFISIVKDSSIISLISIQEMTFVGSEIANSSGLIFEIWLL 282 >gi|309379288|emb|CBX22061.1| unnamed protein product [Neisseria lactamica Y92-1009] Length = 219 Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 58/181 (32%), Positives = 95/181 (52%), Gaps = 16/181 (8%) Query: 228 LIFGLPTLVLIALKY-----------QLHFDKPVLGQ--FNFIGGSTVSPE---FMSLYI 271 L+FGLP V+ A + +L + P+L Q F + G + + F I Sbjct: 32 LLFGLPVAVVTAYRIRPFYALARAYIELSRNTPLLIQLFFLYYGLPKMGIKWDGFTCGVI 91 Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 AL A+++AE VR+G++AVP+GQ+EA A+GL+ + R V LPQA P + + Sbjct: 92 ALVFLGASYMAEAVRAGILAVPKGQVEAGKAIGLSRFQVFRYVELPQAWAVAFPAVAANI 151 Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 L L+K +S+ AVG A+L+ V +I + E + + YL + + ++L + RL + Sbjct: 152 LFLMKETSVISAVGIAELLFVTKDVIGMDYKTNEALFLLFAAYLIILLPVSLLVRRLENR 211 Query: 392 I 392 I Sbjct: 212 I 212 >gi|308388974|gb|ADO31294.1| amino acid permease integral membrane protein [Neisseria meningitidis alpha710] Length = 227 Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 36/121 (29%), Positives = 67/121 (55%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I S A+ +E +R+ +++VP+GQ EA ++G+T+ + R ++ PQA R +PPL+++ Sbjct: 100 IGFSLNVGAYASETIRAAILSVPKGQWEAGFSIGMTYMQTFRRIVAPQAFRVAVPPLSNE 159 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++ L KN+SLA V +L V N+T + + + +Y ++ L RL Sbjct: 160 FIGLFKNTSLAAVVTVTELFRVAQETANRTYDFLPVYIEAALVYWCFCKVLFLIQARLEK 219 Query: 391 K 391 + Sbjct: 220 R 220 >gi|297517480|ref|ZP_06935866.1| glutamine ABC transporter permease protein [Escherichia coli OP50] Length = 195 Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 56/178 (31%), Positives = 96/178 (53%), Gaps = 12/178 (6%) Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248 I V G+V+ L A +R F + L++I +I G P +V + Y F Sbjct: 25 ISVLGLAGGLVIGLLAG-FARTFGGWIANHVALVFIE--VIRGTPIVVQVMFIY---FAL 78 Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308 P+ FN + + P F + + + + A+IAEI R ++++ +G EA +ALGL+ Sbjct: 79 PM--AFNDL---RIDP-FTAAVVTIMINSGAYIAEITRGAVLSIHKGFREAGLALGLSRW 132 Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 + R V+LP A+R ++PPL +Q++ +K++SL + +G A+L G II +A+EI Sbjct: 133 ETIRYVILPLALRRMLPPLGNQWIISIKDTSLFIVIGVAELTRQGQEIIAGNFRALEI 190 >gi|261409440|ref|YP_003245681.1| ectoine/hydroxyectoine ABC transporter permease EhuD [Paenibacillus sp. Y412MC10] gi|329922585|ref|ZP_08278160.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD [Paenibacillus sp. HGF5] gi|261285903|gb|ACX67874.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD [Paenibacillus sp. Y412MC10] gi|328942129|gb|EGG38411.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD [Paenibacillus sp. HGF5] Length = 220 Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 56/209 (26%), Positives = 107/209 (51%), Gaps = 17/209 (8%) Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249 FV + ++G++L+ FA R K PL I+ +I + L+ + L++ P Sbjct: 29 FVVALIIGLLLA-FAAR---------SKFKPLSLITKGIIEFIRNTPLLVQVFFLYYSLP 78 Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309 +L + P F + I L + + +++E+ RSG+ VP+GQ EAA AL T + Sbjct: 79 LLTGISI-------PAFYAGVIGLGLHYSTYLSEVYRSGIEGVPKGQWEAATALNYTKSQ 131 Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369 R ++LPQA+ IIP L + + + K + + A+ +++ I++Q+ +A E + Sbjct: 132 TWRSIILPQAVPPIIPVLGNYLIVMFKETPILCAITLVEMMLTAKNIVSQSFRAFEPYTL 191 Query: 370 WMFIYLSLSIMIALFMNRLNAKIALKEKK 398 ++L +S + +L + RL ++ L+ K Sbjct: 192 VGILFLIISYIASLLVQRLEKRLNLQRGK 220 >gi|217972161|ref|YP_002356912.1| polar amino acid ABC transporter inner membrane subunit [Shewanella baltica OS223] gi|304411005|ref|ZP_07392621.1| polar amino acid ABC transporter, inner membrane subunit [Shewanella baltica OS183] gi|307301872|ref|ZP_07581630.1| polar amino acid ABC transporter, inner membrane subunit [Shewanella baltica BA175] gi|217497296|gb|ACK45489.1| polar amino acid ABC transporter, inner membrane subunit [Shewanella baltica OS223] gi|304350540|gb|EFM14942.1| polar amino acid ABC transporter, inner membrane subunit [Shewanella baltica OS183] gi|306913910|gb|EFN44331.1| polar amino acid ABC transporter, inner membrane subunit [Shewanella baltica BA175] Length = 226 Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 41/123 (33%), Positives = 76/123 (61%), Gaps = 4/123 (3%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IA + A+I+EI+R+G+ AV +GQ EAA +LGL+ + ++LPQA+++I+P L ++ Sbjct: 101 IAFGLNSGAYISEIIRAGIQAVDKGQTEAARSLGLSQAMTMKSIILPQAIKNILPALGNE 160 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA----IEIILIWMFIYLSLSIMIALFMN 386 ++ LLK +++ +G DL+ G I ++T + LI++F+ S + +++ F Sbjct: 161 FIVLLKETAVIGFIGGVDLMRAGEIIRSRTFEDSVPLFTCALIYLFLTYSFTFVLSKFEK 220 Query: 387 RLN 389 RL Sbjct: 221 RLK 223 >gi|86138394|ref|ZP_01056968.1| amino acid ABC transporter [Roseobacter sp. MED193] gi|85824919|gb|EAQ45120.1| amino acid ABC transporter [Roseobacter sp. MED193] Length = 218 Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 49/169 (28%), Positives = 89/169 (52%), Gaps = 11/169 (6%) Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283 I +FL G P L+ + L Y F + P F++ I L + A + +E Sbjct: 57 IFSFLFLGTPLLLQLFLIY-----------FGLVQIGIDVPAFVAGVIGLGLHFAVYNSE 105 Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343 + ++ ++AV +GQ+EAA LGL+ +A R V++PQA+R +IPP+ + + LLK+S+L Sbjct: 106 LFQTSILAVDKGQIEAARTLGLSRMQALRKVVVPQAVRDVIPPIGNNMIALLKDSALVSV 165 Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 +G ++L I T + E ++ IY +++ + + R+ +I Sbjct: 166 IGVSELTLSAQRAIGSTYRPFEFYVLVAAIYYIINLGMEAVLRRVERRI 214 >gi|253686633|ref|YP_003015823.1| polar amino acid ABC transporter, inner membrane subunit [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251753211|gb|ACT11287.1| polar amino acid ABC transporter, inner membrane subunit [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 362 Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 37/93 (39%), Positives = 63/93 (67%), Gaps = 1/93 (1%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G+T+ +L + + + +A++AE+VR GL A+P+GQ EAA +LGL + + LV+LPQ Sbjct: 220 GTTIDKLLRAL-VGVILFQSAYVAEVVRGGLQALPKGQYEAAESLGLGYWRMQGLVILPQ 278 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 A++ +IP L + ++L K++SL + +G DL S Sbjct: 279 ALKMVIPGLVNTIISLFKDTSLVIIIGLFDLFS 311 >gi|229514446|ref|ZP_04403907.1| amino acid ABC transporter permease protein [Vibrio cholerae TMA 21] gi|229526418|ref|ZP_04415822.1| amino acid ABC transporter permease protein [Vibrio cholerae bv. albensis VL426] gi|229336576|gb|EEO01594.1| amino acid ABC transporter permease protein [Vibrio cholerae bv. albensis VL426] gi|229348426|gb|EEO13384.1| amino acid ABC transporter permease protein [Vibrio cholerae TMA 21] Length = 266 Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 52/158 (32%), Positives = 84/158 (53%), Gaps = 14/158 (8%) Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268 R G+AL YI+ ++ P LV I L Y + PV+G F + Sbjct: 90 RQSRSLVGRALGTGYIA--VVRNTPLLVQIYLLYFVF--GPVIGL----------DRFAT 135 Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328 +AL+ + A+ AE+ R GL ++ +GQ EAA +LGL+ V+LPQ ++ +PPLT Sbjct: 136 AVLALALFQGAYTAEVFRGGLNSIAQGQYEAARSLGLSRFFTFYDVILPQLLQRTLPPLT 195 Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 ++ ++L+KNSS+ + DL + G I+++T EI Sbjct: 196 NEMVSLIKNSSIVSVMAIFDLTTQGRNIVSETAMPFEI 233 >gi|15676686|ref|NP_273830.1| amino acid ABC transporter, permease protein [Neisseria meningitidis MC58] gi|7226020|gb|AAF41201.1| amino acid ABC transporter, permease protein [Neisseria meningitidis MC58] Length = 220 Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 36/121 (29%), Positives = 67/121 (55%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I S A+ +E +R+ +++VP+GQ EA ++G+T+ + R ++ PQA R +PPL+++ Sbjct: 93 IGFSLNVGAYASETIRAAILSVPKGQWEAGFSIGMTYMQTFRRIVAPQAFRVAVPPLSNE 152 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++ L KN+SLA V +L V N+T + + + +Y ++ L RL Sbjct: 153 FIGLFKNTSLAAVVTVTELFRVAQETANRTYDFLPVYIEAALVYWCFCKVLFLIQARLEK 212 Query: 391 K 391 + Sbjct: 213 R 213 >gi|84394507|ref|ZP_00993217.1| amino acid ABC transproter, permease protein [Vibrio splendidus 12B01] gi|84374860|gb|EAP91797.1| amino acid ABC transproter, permease protein [Vibrio splendidus 12B01] Length = 223 Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 53/170 (31%), Positives = 93/170 (54%), Gaps = 13/170 (7%) Query: 183 MDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV-LIALK 241 + T ++ ++ ++LSL + R F L LYIS F G P LV L L Sbjct: 19 LGTTMEMAIWGLFFALILSLILANI-RVFKIPVLDQLSQLYISFFR--GTPLLVQLFLLY 75 Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301 Y L P + + G + I L+ + AA++AE +R+ +I + R QMEA++ Sbjct: 76 YGLPQVFPWMVGLDAFGAAV---------IGLTLHFAAYMAESIRAAIIGIDRSQMEASL 126 Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 ++G+T +A R V+LPQA R +P L + +++++K++SLA +G A++++ Sbjct: 127 SVGMTTSQAMRRVILPQATRVALPSLMNYFIDMIKSTSLAFTLGVAEIMA 176 >gi|120597747|ref|YP_962321.1| polar amino acid ABC transporter inner membrane subunit [Shewanella sp. W3-18-1] gi|120557840|gb|ABM23767.1| polar amino acid ABC transporter, inner membrane subunit [Shewanella sp. W3-18-1] gi|319427459|gb|ADV55533.1| ABC arginine transporter, inner membrane subunit, ArtQ [Shewanella putrefaciens 200] Length = 226 Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 41/123 (33%), Positives = 76/123 (61%), Gaps = 4/123 (3%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IA + A+I+EI+R+G+ AV +GQ EAA +LGL+ + ++LPQA+++I+P L ++ Sbjct: 101 IAFGLNSGAYISEIIRAGIQAVDKGQTEAARSLGLSQAMTMKSIILPQAIKNILPALGNE 160 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA----IEIILIWMFIYLSLSIMIALFMN 386 ++ LLK +++ +G DL+ G I ++T + LI++F+ S + +++ F Sbjct: 161 FIVLLKETAVIGFIGGVDLMRAGEIIRSRTFEDSVPLFTCALIYLFLTYSFTFVLSKFEK 220 Query: 387 RLN 389 RL Sbjct: 221 RLK 223 >gi|313667601|ref|YP_004047885.1| ABC transporter [Neisseria lactamica ST-640] gi|313005063|emb|CBN86495.1| putative ABC transporter [Neisseria lactamica 020-06] Length = 219 Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 58/181 (32%), Positives = 95/181 (52%), Gaps = 16/181 (8%) Query: 228 LIFGLPTLVLIALKY-----------QLHFDKPVLGQ--FNFIGGSTVSPE---FMSLYI 271 L+FGLP V+ A + +L + P+L Q F + G + + F I Sbjct: 32 LLFGLPVAVVTAYRIRPFYALARAYIELSRNTPLLIQLFFLYYGLPKMGIKWDGFTCGVI 91 Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 AL A+++AE VR+G++AVP+GQ+EA A+GL+ + R V LPQA P + + Sbjct: 92 ALVFLGASYMAEAVRAGILAVPKGQVEAGKAIGLSRFQVFRYVELPQAWAVAFPAVAANI 151 Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 L L+K +S+ AVG A+L+ V +I + E + + YL + + ++L + RL + Sbjct: 152 LFLMKETSVISAVGIAELLFVTKDVIGMDYKTNEALFLLFAAYLIILLPVSLLVRRLENR 211 Query: 392 I 392 I Sbjct: 212 I 212 >gi|254670614|emb|CBA06589.1| polar amino acid transport system permease protein [Neisseria meningitidis alpha153] Length = 227 Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 36/121 (29%), Positives = 67/121 (55%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I S A+ +E +R+ +++VP+GQ EA ++G+T+ + R ++ PQA R +PPL+++ Sbjct: 100 IGFSLNVGAYASETIRAAILSVPKGQWEAGFSIGMTYMQTFRRIVAPQAFRVAVPPLSNE 159 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++ L KN+SLA V +L V N+T + + + +Y ++ L RL Sbjct: 160 FIGLFKNTSLAAVVTVTELFRVAQETANRTYDFLPVYIEAALVYWCFCKVLFLIQARLEK 219 Query: 391 K 391 + Sbjct: 220 R 220 >gi|254284659|ref|ZP_04959626.1| amino acid ABC transporter, permease protein [Vibrio cholerae AM-19226] gi|150425444|gb|EDN17220.1| amino acid ABC transporter, permease protein [Vibrio cholerae AM-19226] Length = 266 Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 52/158 (32%), Positives = 84/158 (53%), Gaps = 14/158 (8%) Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268 R G+AL YI+ ++ P LV I L Y + PV+G F + Sbjct: 90 RQSRSLVGRALGTGYIA--VVRNTPLLVQIYLLYFVF--GPVIG----------LDRFAT 135 Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328 +AL+ + A+ AE+ R GL ++ +GQ EAA +LGL+ V+LPQ ++ +PPLT Sbjct: 136 AVLALALFQGAYTAEVFRGGLNSIAQGQYEAARSLGLSRFFTFYDVILPQLLQRTLPPLT 195 Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 ++ ++L+KNSS+ + DL + G I+++T EI Sbjct: 196 NEMVSLIKNSSIVSVMAIFDLTTQGRNIVSETAMPFEI 233 >gi|153802492|ref|ZP_01957078.1| amino acid ABC transporter, permease protein [Vibrio cholerae MZO-3] gi|124121962|gb|EAY40705.1| amino acid ABC transporter, permease protein [Vibrio cholerae MZO-3] Length = 220 Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 54/170 (31%), Positives = 95/170 (55%), Gaps = 13/170 (7%) Query: 183 MDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV-LIALK 241 + T ++ + V ++L+LF + R F L LYIS F G P LV L L Sbjct: 19 LGTTLEMASWGLVFALILALFLANI-RVFKVPVLDPLSQLYISFFR--GTPLLVQLFLLY 75 Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301 Y L P+L + F + I L+ + AA++AE +R+ +I + R QMEA++ Sbjct: 76 YGLPQIFPLLVGLD---------AFSAAVIGLTLHFAAYMAESIRAAIIGIDRSQMEASL 126 Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 ++G+T +A R ++LPQA R +P L + +++++K++SLA +G A++++ Sbjct: 127 SVGMTTSQAMRRIILPQATRVALPSLMNYFIDMIKSTSLAFTLGVAEIMA 176 >gi|239833820|ref|ZP_04682148.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium LMG 3301] gi|239821883|gb|EEQ93452.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium LMG 3301] Length = 239 Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 47/155 (30%), Positives = 92/155 (59%), Gaps = 2/155 (1%) Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286 F+ G P LV I + Y P + +++F+ P + ++ IAL+ AA+ +EI+R Sbjct: 58 FVFRGTPLLVQIFIIYYGLSQFPAI-RYSFLWPILREPYWCAI-IALTLNNAAYASEIIR 115 Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346 GL++VP GQ+EAA A G++ R +++P A+R +P ++ ++++K +SLA + Sbjct: 116 GGLLSVPHGQIEAAKACGMSSFTCFRRIVMPLAIRQALPGYGNEMISMIKATSLASIITL 175 Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 ++ + +I ++ +AIEI +I IYL+++ ++ Sbjct: 176 MEVTGIAAKLIAESYRAIEIFVIAGAIYLAINFVL 210 Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust. Identities = 27/71 (38%), Positives = 36/71 (50%), Gaps = 1/71 (1%) Query: 96 TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSV 155 T LA S ++ + L RLS ++ WI R+YV VFR P LV IF +Y LS Sbjct: 20 TLKLAASSIVFGAFLALLFALMRLSGLTVLDWIARLYVFVFRGTPLLVQIFIIYYG-LSQ 78 Query: 156 LPIPDHSIVLP 166 P +S + P Sbjct: 79 FPAIRYSFLWP 89 >gi|229524911|ref|ZP_04414316.1| amino acid ABC transporter permease protein [Vibrio cholerae bv. albensis VL426] gi|229338492|gb|EEO03509.1| amino acid ABC transporter permease protein [Vibrio cholerae bv. albensis VL426] Length = 223 Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 54/170 (31%), Positives = 95/170 (55%), Gaps = 13/170 (7%) Query: 183 MDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV-LIALK 241 + T ++ + V ++L+LF + R F L LYIS F G P LV L L Sbjct: 19 LGTTLEMASWGLVFALILALFLANI-RVFKVPVLDPLSQLYISFFR--GTPLLVQLFLLY 75 Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301 Y L P+L + F + I L+ + AA++AE +R+ +I + R QMEA++ Sbjct: 76 YGLPQVFPLLVGLD---------AFSAAVIGLTLHFAAYMAESIRAAIIGIDRSQMEASL 126 Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 ++G+T +A R ++LPQA R +P L + +++++K++SLA +G A++++ Sbjct: 127 SVGMTTSQAMRRIILPQATRVALPSLMNYFIDMIKSTSLAFTLGVAEIMA 176 >gi|288575665|ref|ZP_05977394.2| L-cystine ABC transporter, permease protein [Neisseria mucosa ATCC 25996] gi|288567449|gb|EFC89009.1| L-cystine ABC transporter, permease protein [Neisseria mucosa ATCC 25996] Length = 227 Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 36/121 (29%), Positives = 67/121 (55%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I S A+ +E +R+ +++VP+GQ EA ++G+T+ + R ++ PQA R +PPL+++ Sbjct: 100 IGFSLNVGAYASETIRAAILSVPKGQWEAGFSIGMTYMQTFRRIVAPQAFRVAVPPLSNE 159 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++ L KN+SLA V +L V N+T + + + +Y ++ L RL Sbjct: 160 FIGLFKNTSLAAVVTVTELFRVAQETANRTYDFLPVYIEAALVYWCFCKVLFLIQARLEK 219 Query: 391 K 391 + Sbjct: 220 R 220 >gi|295096063|emb|CBK85153.1| amino acid ABC transporter membrane protein 2, PAAT family (TC 3.A.1.3.-) [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 228 Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 55/163 (33%), Positives = 90/163 (55%), Gaps = 17/163 (10%) Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256 GIVL+ A R G L+ LI G+P + +I + + + P++ + Sbjct: 46 GIVLACVAWRYP-------GVVRSALFAWAELIRGIPLIFVI---FWMWYLLPLITGRDL 95 Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316 G +TV+ +AL+ +TAA + V +GL A+P GQ EAA++ G + ++ VLL Sbjct: 96 PGATTVT-------LALAWFTAAAVMHSVLAGLRALPSGQNEAALSQGFSTQQTLWRVLL 148 Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359 PQA+R+I+P L +++LLK++SLA V +L +V G I N+ Sbjct: 149 PQALRNILPSLVGIFISLLKDTSLAFIVNVPELTTVAGQINNR 191 >gi|56751274|ref|YP_171975.1| amino acid ABC transporter permease [Synechococcus elongatus PCC 6301] gi|56686233|dbj|BAD79455.1| permease protein of amino acid ABC transporter [Synechococcus elongatus PCC 6301] Length = 396 Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 43/125 (34%), Positives = 72/125 (57%), Gaps = 3/125 (2%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + L+ + +A++AE VR GL A+P+GQ EAA ALGL + R ++LPQA+R IP + Sbjct: 268 VGLTIFLSAYLAETVRGGLQAIPQGQFEAAAALGLDLFQTYRFIVLPQALRISIPAIVGL 327 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQT---GQAIEIILIWMFIYLSLSIMIALFMNR 387 +LNLL++++L VG +L+ + +I+ G+ E+ L +Y +A R Sbjct: 328 FLNLLQDTTLLSIVGLLELLGISRSILANPAYLGRYAEVYLFLGVLYWLCCYGLAQLSRR 387 Query: 388 LNAKI 392 L ++ Sbjct: 388 LEQRL 392 >gi|312277580|gb|ADQ62237.1| Amino acid (Glutamine) ABC transporter substrate binding protein/permease protein [Streptococcus thermophilus ND03] Length = 516 Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 37/109 (33%), Positives = 65/109 (59%) Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 +S T A+++EIVR G+ AV +GQ EAA ALG +H + R ++LPQ +R+I+P ++++ Sbjct: 385 VSINTGAYMSEIVRGGIFAVDKGQFEAATALGFSHGQTMRKIVLPQVIRNILPATGNEFV 444 Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 +K++S+ + +L G T+ QT Q + + IY L+ + Sbjct: 445 INIKDTSVLNVISVVELYFAGNTVATQTYQYFQTFFVIAAIYFVLTFTV 493 >gi|299770479|ref|YP_003732505.1| Binding-protein-dependent transport system inner membrane component family protein [Acinetobacter sp. DR1] gi|298700567|gb|ADI91132.1| Binding-protein-dependent transport system inner membrane component family protein [Acinetobacter sp. DR1] Length = 280 Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 42/123 (34%), Positives = 74/123 (60%) Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 AL YTAA ++E +R+G+ V RGQ AA A+G T ++ R V+LP A R++ P +TS+ Sbjct: 150 ALGLYTAARVSEHIRAGINTVSRGQKFAASAMGFTTAQSYRYVILPVAYRTVWPTITSEA 209 Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 +N+ KNS++ A+ + + T+ +T Q I I+++ +YL ++ I M + + Sbjct: 210 MNVFKNSAVLYALSVLNFFAYTKTMREETSQDIIILILSTPVYLIITYSIKFIMAWIEKR 269 Query: 392 IAL 394 +A+ Sbjct: 270 MAV 272 Score = 40.8 bits (94), Expect = 0.36, Method: Compositional matrix adjust. Identities = 23/56 (41%), Positives = 33/56 (58%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147 G W A + A ++G+L+G R NK +A+I YVE+FRNIP +V +FF Sbjct: 54 GVFTMVWTAVIAFLIAFLLGSLLGVIRTLPNKPLAFIGNCYVEIFRNIPLIVQLFF 109 >gi|218661166|ref|ZP_03517096.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium etli IE4771] Length = 203 Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 55/188 (29%), Positives = 101/188 (53%), Gaps = 14/188 (7%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 + SF G++L L T ++R F A+ Y+ ++I G P LV + + + + P Sbjct: 28 LLSFFFGLILGLI-TAIARLFGPAPVAAIARFYV--WVIRGTPLLVQL---FVIFYGLPS 81 Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 +G + F + I + A+ +EI+R+ + +VP+GQ EAA ++G++ R+A Sbjct: 82 IG--------ILLDAFPAALIGFTLNIGAYSSEIIRAVISSVPKGQWEAAYSIGMSWRQA 133 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370 +LPQA R +PPL++ +++L+K++SLA A+ +L I+ T + + + + Sbjct: 134 MSRTILPQAGRVAVPPLSNTFISLVKDTSLAAAITVPELFQAAQRIVATTYEPLILYIEA 193 Query: 371 MFIYLSLS 378 IYL LS Sbjct: 194 ALIYLVLS 201 >gi|29374889|ref|NP_814042.1| amino acid ABC transporter, amino acid-binding/permease protein [Enterococcus faecalis V583] gi|29342347|gb|AAO80113.1| amino acid ABC transporter, amino acid-binding/permease protein [Enterococcus faecalis V583] Length = 527 Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 63/225 (28%), Positives = 108/225 (48%), Gaps = 36/225 (16%) Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRH-----FHEKTGKALPLLY 223 MFL GL+ + T V LG+++ +F T F +K G + +Y Sbjct: 297 MFLRGAGLTLFIALIGT-----VVGTTLGLLIGVFRTIPDSENPVARFFQKLGNLILSIY 351 Query: 224 ISTFLIFGLPTLVL-------IALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 I F G P +V +AL + + D+ V +L+I +S Sbjct: 352 IEVFR--GTPMMVQAMVIFYGLALAFGISLDRTV----------------AALFI-VSVN 392 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 T A+++EIVR G+ AV +GQ EAA A+G+TH + R V++PQ +R+I+P ++++ +K Sbjct: 393 TGAYMSEIVRGGIFAVDKGQFEAAQAIGMTHGQTMRKVVIPQVLRNILPATGNEFVINIK 452 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 ++++ +G ADL G Q + I +YL ++ +I Sbjct: 453 DTAVLSVIGVADLFFQGNAASGANFQFFQTFTIVGIMYLVMTFVI 497 >gi|172057735|ref|YP_001814195.1| polar amino acid ABC transporter, inner membrane subunit [Exiguobacterium sibiricum 255-15] gi|171990256|gb|ACB61178.1| polar amino acid ABC transporter, inner membrane subunit [Exiguobacterium sibiricum 255-15] Length = 228 Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 56/173 (32%), Positives = 93/173 (53%), Gaps = 15/173 (8%) Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIA-LSCYTAAF 280 LYIS + G+P LVL+ + +F PV+ + + ++ IA S +AA+ Sbjct: 67 LYIS--FMRGVPILVLL---FMFYFGLPVI---------NIQLDALTAAIAGFSLNSAAY 112 Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340 +AEI+RS L++V RGQ EAA +LGL+ + ++LPQA+R IPPL++ L+L+K SSL Sbjct: 113 MAEIIRSSLLSVDRGQQEAAQSLGLSRYRVFVGIILPQAVRLAIPPLSNVLLDLVKASSL 172 Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393 A + ++ + + + + + FIY + +IA L + A Sbjct: 173 AAMITVPEIFQRAKIVGGREFDYMTVYFVIAFIYWGICAVIAAGQEMLERRFA 225 >gi|313894065|ref|ZP_07827631.1| ABC transporter, permease protein [Veillonella sp. oral taxon 158 str. F0412] gi|313441629|gb|EFR60055.1| ABC transporter, permease protein [Veillonella sp. oral taxon 158 str. F0412] Length = 218 Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 38/120 (31%), Positives = 67/120 (55%), Gaps = 1/120 (0%) Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 AA++ EI R G+ ++ RGQ E A LG T+ + R ++LPQ + ++PPL ++ +NLLK+ Sbjct: 100 AAYLCEIFRGGIQSISRGQYEGAKVLGFTYSQTMRKIILPQMFKRVLPPLANETINLLKD 159 Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 +SL + D++ + +I+ Q I L+ YL + ++ N L + A+ E Sbjct: 160 TSLVYVLAMNDILRITKSIV-QRDFDISAFLVAAIFYLIFTFILTNIFNYLERRFAVYED 218 >gi|300694623|ref|YP_003750596.1| amino-acid ABC transporter protein [Ralstonia solanacearum PSI07] gi|299076660|emb|CBJ35998.1| putative amino-acid ABC transporter protein [Ralstonia solanacearum PSI07] Length = 230 Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 60/163 (36%), Positives = 89/163 (54%), Gaps = 17/163 (10%) Query: 193 SFVLGIVLS--LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 +F LG+VLS L RLSR+ + + + + ++S I G P L+ + L Y + P+ Sbjct: 36 AFALGLVLSIVLLWARLSRY---RILRGMVMAWVSA--IRGTPALIHMLLAY--YVVPPL 88 Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 LG ++SP + AL+C T+A++ EI+R L +VP Q AA ALG+ + Sbjct: 89 LGL-------SISPLAAGIG-ALACNTSAYLVEILRGALSSVPDTQRAAAQALGMREPQV 140 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353 R VLLPQ IPPLTS++ LLK SSL + +L +V Sbjct: 141 WRHVLLPQVFYRAIPPLTSEFTILLKASSLMSIIAVPELATVA 183 >gi|227113999|ref|ZP_03827655.1| L-amino acid ABC transporter permease protein [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 362 Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 37/93 (39%), Positives = 63/93 (67%), Gaps = 1/93 (1%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G+T+ +L + + + +A++AE+VR GL A+P+GQ EAA +LGL + + LV+LPQ Sbjct: 220 GTTIDKLLRAL-VGVILFQSAYVAEVVRGGLQALPKGQYEAAESLGLGYWRMQGLVILPQ 278 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 A++ +IP L + ++L K++SL + +G DL S Sbjct: 279 ALKMVIPGLVNTIISLFKDTSLVIIIGLFDLFS 311 >gi|222102076|ref|YP_002546666.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Agrobacterium radiobacter K84] gi|221728193|gb|ACM31202.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Agrobacterium radiobacter K84] Length = 218 Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 42/124 (33%), Positives = 74/124 (59%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IAL+ ++A++AEIVR G +AVP G EA +A+GL + ++ P A R ++P L +Q Sbjct: 94 IALTVNSSAYLAEIVRGGFMAVPHGLREAGLAMGLPLHRVLLYIIGPVAFRRMVPALGNQ 153 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++ LK++SL + +G A+L G I+ + +A+EI IYL + ++A+ + Sbjct: 154 FIIGLKDTSLLIVIGVAELTRTGQEIMTENYRAVEIWAAVGVIYLVIISIMAIIFRVIEK 213 Query: 391 KIAL 394 +I + Sbjct: 214 RIQM 217 >gi|331014304|gb|EGH94360.1| amino acid ABC transporter permease [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 220 Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 46/164 (28%), Positives = 88/164 (53%), Gaps = 11/164 (6%) Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292 P LVLI L Y F P LG + S + LS Y A++ E+ R+GL+++ Sbjct: 68 PILVLILLIY---FALPGLG--------IRLDKLASFVVTLSLYAGAYLTEVFRAGLLSI 116 Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352 +GQ EA +A+GL + +++P + +++P L++ +++L K++SLA A+ +L Sbjct: 117 HKGQREAGLAIGLGEWQVRAYIIVPVMLHNVLPALSNNFISLFKDTSLAAAIAVPELTYY 176 Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 I ++ + IE L+ +Y+ +IA+ + L ++A++ Sbjct: 177 ARKINVESYRVIETWLVTTALYVVACYVIAMLLRTLEQRLAIRR 220 >gi|257455524|ref|ZP_05620756.1| ABC glutamate/aspartate transporter, inner membrane subunit GltK [Enhydrobacter aerosaccus SK60] gi|257447093|gb|EEV22104.1| ABC glutamate/aspartate transporter, inner membrane subunit GltK [Enhydrobacter aerosaccus SK60] Length = 223 Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 37/106 (34%), Positives = 66/106 (62%), Gaps = 4/106 (3%) Query: 245 HFDKPVLGQFNFIGGS--TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302 +F P++ +N + G+ T+ F S +A + AA+ +EIVR+G+ ++ +GQ+ AA A Sbjct: 73 YFAVPMV--YNLVTGTYLTLDTAFTSCVVAFMVFEAAYFSEIVRAGIQSIGKGQVNAAKA 130 Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348 LG+T+ + R ++LPQA R + P L Q + L ++++L A+G D Sbjct: 131 LGMTYGQTMRFIILPQAFRKMFPLLLQQSIILFQDTTLVFAIGLVD 176 >gi|307328905|ref|ZP_07608074.1| polar amino acid ABC transporter, inner membrane subunit [Streptomyces violaceusniger Tu 4113] gi|306885415|gb|EFN16432.1| polar amino acid ABC transporter, inner membrane subunit [Streptomyces violaceusniger Tu 4113] Length = 297 Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 62/199 (31%), Positives = 103/199 (51%), Gaps = 16/199 (8%) Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV-------LIALKYQLH 245 F LGIVL+ RLSR K+ + YI F +P +V L L +L Sbjct: 92 GFALGIVLAFM--RLSRSPFLKS---VAFTYIWAFR--SIPLIVQLLFWFNLTYLYKRLD 144 Query: 246 FDKPV-LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304 F P G F+F V + + L+ + AA+ AEIVR G++AV GQ+EAA ALG Sbjct: 145 FGIPFGPGFFSFDTAGLVG-AMSAAVLGLALHQAAYAAEIVRGGVLAVDGGQLEAAAALG 203 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364 + + R ++LPQAMRSI+P ++ ++L K +S+ + +L I + G+ + Sbjct: 204 IPRLRQLRRIVLPQAMRSILPNAANEVISLFKGTSIVSVMAIGELFYQVQVIYGRNGRVV 263 Query: 365 EIILIWMFIYLSLSIMIAL 383 ++++ Y+ L+ ++++ Sbjct: 264 PLLMVATVWYIILTTVLSI 282 >gi|307329225|ref|ZP_07608390.1| polar amino acid ABC transporter, inner membrane subunit [Streptomyces violaceusniger Tu 4113] gi|306885124|gb|EFN16145.1| polar amino acid ABC transporter, inner membrane subunit [Streptomyces violaceusniger Tu 4113] Length = 314 Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 61/215 (28%), Positives = 113/215 (52%), Gaps = 37/215 (17%) Query: 185 TNAKIF----VFSFVLGIVLSLFATRLSRHFHEK---TG-----KALPLLYISTFLIFGL 232 T K+F V S LG++L++ RLS H + TG +A+PLL I+ ++++ Sbjct: 69 TTLKVFAVAAVLSLALGVLLAV--GRLSDHKAVRWFATGFIELFRAVPLL-ITIYVLW-- 123 Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292 ++ L Y+ + +G S + F +L I L+ Y + AE++R+G+ +V Sbjct: 124 ----VLFLTYR-----------SDLGLSGDNTGFWALVIGLTVYNGSVQAEVLRAGINSV 168 Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF-----A 347 PRGQ EAA ALG+ + VL+PQA+R+++P + SQ + LK++SL + + Sbjct: 169 PRGQREAAYALGMRKTQVMMTVLVPQAVRAMLPTIISQLVVTLKDTSLGYVITYQELLFQ 228 Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382 G ++N + +I++ IY+++ + ++ Sbjct: 229 LQQLAGNIVVNDDNPYVPVIIVGGAIYIAMCLALS 263 Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust. Identities = 21/63 (33%), Positives = 35/63 (55%) Query: 87 TAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIF 146 T+I G V T + + + +G L+ GRLS +K V W ++E+FR +P L+ I+ Sbjct: 61 TSIRDGVVTTLKVFAVAAVLSLALGVLLAVGRLSDHKAVRWFATGFIELFRAVPLLITIY 120 Query: 147 FLY 149 L+ Sbjct: 121 VLW 123 >gi|302338912|ref|YP_003804118.1| polar amino acid ABC transporter inner membrane subunit [Spirochaeta smaragdinae DSM 11293] gi|301636097|gb|ADK81524.1| polar amino acid ABC transporter, inner membrane subunit [Spirochaeta smaragdinae DSM 11293] Length = 260 Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 44/132 (33%), Positives = 73/132 (55%), Gaps = 4/132 (3%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P S +ALS + A+ +EI+R + ++ +GQ EAA +LG + ++LPQA+R+ Sbjct: 128 PATPSAILALSLFEGAYTSEILRGAIFSISKGQWEAAYSLGFSSGDLYCRIILPQALRTS 187 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL----IWMFIYLSLSI 379 +P L +Q +N +K+S+L + DL G II++T EI I++ I L L + Sbjct: 188 LPALANQAINTVKDSALVSTIAIYDLTMRGREIISETFLTFEIWFTVAAIYLLITLGLQL 247 Query: 380 MIALFMNRLNAK 391 I L LN++ Sbjct: 248 CIHLIDRSLNSR 259 Score = 43.1 bits (100), Expect = 0.074, Method: Compositional matrix adjust. Identities = 28/83 (33%), Positives = 44/83 (53%), Gaps = 1/83 (1%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G T W++ ++ + +IGTL RLS + I R+YV + RN P L+ +FF+ Sbjct: 58 LLRGLGVTLWISLISLLFSFLIGTLTLLARLSEGIVAPVIARLYVSLIRNTPLLIQLFFI 117 Query: 149 YKSVLSVLPIP-DHSIVLPFGMF 170 Y + V IP S +L +F Sbjct: 118 YFVIAPVFNIPATPSAILALSLF 140 >gi|262191874|ref|ZP_06050043.1| amino acid ABC transporter permease protein [Vibrio cholerae CT 5369-93] gi|262032239|gb|EEY50808.1| amino acid ABC transporter permease protein [Vibrio cholerae CT 5369-93] Length = 265 Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 52/158 (32%), Positives = 84/158 (53%), Gaps = 14/158 (8%) Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268 R G+AL YI+ ++ P LV I L Y + PV+G F + Sbjct: 89 RQSRSLVGRALGTGYIA--VVRNTPLLVQIYLLYFVF--GPVIG----------LDRFAT 134 Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328 +AL+ + A+ AE+ R GL ++ +GQ EAA +LGL+ V+LPQ ++ +PPLT Sbjct: 135 AVLALALFQGAYTAEVFRGGLNSIAQGQYEAARSLGLSRFFTFYDVILPQLLQRTLPPLT 194 Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 ++ ++L+KNSS+ + DL + G I+++T EI Sbjct: 195 NEMVSLIKNSSIVSVMAIFDLTTQGRNIVSETAMPFEI 232 >gi|163858457|ref|YP_001632755.1| putative ABC-type amino acid transporter, permease component [Bordetella petrii DSM 12804] gi|163262185|emb|CAP44487.1| putative ABC-type amino acid transporter, permease component [Bordetella petrii] Length = 231 Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 56/187 (29%), Positives = 99/187 (52%), Gaps = 12/187 (6%) Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273 +T + PL ++S+ + + LI + + +F PV+ F P F + A+ Sbjct: 50 RTSGSAPLKWLSSAWVHTFRAIPLIMIVFWAYFLLPVMIGFEV-------PPFSTALAAI 102 Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333 Y +AF+AEIVR+G+ +VP GQ+EAA A+GL + + V LPQA+ ++IP L +Q+++ Sbjct: 103 IVYESAFLAEIVRAGIQSVPAGQVEAARAVGLGYFQTLWSVQLPQALSNMIPSLVNQFVS 162 Query: 334 LLKNSSLAVAVGFADLVSVGGTI--INQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 +K +S+ +G + I I TG A+ L+ Y L +++ RL + Sbjct: 163 TIKATSIVYIIGVQEAAFSAQQINSIELTG-ALRTYLVLALFYFLLCALLSRLARRL--E 219 Query: 392 IALKEKK 398 + L+ K+ Sbjct: 220 LHLQHKR 226 Score = 36.6 bits (83), Expect = 6.5, Method: Compositional matrix adjust. Identities = 19/67 (28%), Positives = 33/67 (49%) Query: 83 SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142 S+ + GF T LA G+ A ++G R S + + W+ +V FR IP + Sbjct: 15 GSWPNGPIGGFAGTLILAALGLAGAFPAALVIGVARTSGSAPLKWLSSAWVHTFRAIPLI 74 Query: 143 VVIFFLY 149 +++F+ Y Sbjct: 75 MIVFWAY 81 >gi|81299059|ref|YP_399267.1| amino acid ABC transporter permease [Synechococcus elongatus PCC 7942] gi|81167940|gb|ABB56280.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Synechococcus elongatus PCC 7942] Length = 396 Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 43/125 (34%), Positives = 72/125 (57%), Gaps = 3/125 (2%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + L+ + +A++AE VR GL A+P+GQ EAA ALGL + R ++LPQA+R IP + Sbjct: 268 VGLTIFLSAYLAETVRGGLQAIPQGQFEAAAALGLNLFQTYRFIVLPQALRISIPAIVGL 327 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQT---GQAIEIILIWMFIYLSLSIMIALFMNR 387 +LNLL++++L VG +L+ + +I+ G+ E+ L +Y +A R Sbjct: 328 FLNLLQDTTLLSIVGLLELLGISRSILANPAYLGRYAEVYLFLGVLYWLCCYGLAQLSRR 387 Query: 388 LNAKI 392 L ++ Sbjct: 388 LEQRL 392 >gi|319793874|ref|YP_004155514.1| polar amino acid ABC transporter, inner membrane subunit [Variovorax paradoxus EPS] gi|315596337|gb|ADU37403.1| polar amino acid ABC transporter, inner membrane subunit [Variovorax paradoxus EPS] Length = 352 Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 37/83 (44%), Positives = 53/83 (63%) Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 L+ + AA++AEI+R GL AVPRGQ E A+ALG R ++LPQA+R ++P LT+ Sbjct: 223 GLTLFVAAYLAEIIRGGLQAVPRGQTEVAMALGFGRWPVQRDIVLPQALRLVVPALTNSV 282 Query: 332 LNLLKNSSLAVAVGFADLVSVGG 354 + LK++SL VG +L G Sbjct: 283 VGTLKDTSLVTVVGLFELTGALG 305 >gi|315160767|gb|EFU04784.1| ABC transporter, permease protein [Enterococcus faecalis TX0645] gi|315579366|gb|EFU91557.1| ABC transporter, permease protein [Enterococcus faecalis TX0630] Length = 546 Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 63/225 (28%), Positives = 108/225 (48%), Gaps = 36/225 (16%) Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRH-----FHEKTGKALPLLY 223 MFL GL+ + T V LG+++ +F T F +K G + +Y Sbjct: 316 MFLRGTGLTLFIALIGT-----VVGTTLGLLIGVFRTIPDSENPVARFFQKLGNLILSIY 370 Query: 224 ISTFLIFGLPTLVL-------IALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 I F G P +V +AL + + D+ V +L+I +S Sbjct: 371 IEVFR--GTPMMVQAMVIFYGLALAFGISLDRTV----------------AALFI-VSVN 411 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 T A+++EIVR G+ AV +GQ EAA A+G+TH + R V++PQ +R+I+P ++++ +K Sbjct: 412 TGAYMSEIVRGGIFAVDKGQFEAAQAIGMTHGQTMRKVVIPQVLRNILPATGNEFVINIK 471 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 ++++ +G ADL G Q + I +YL ++ +I Sbjct: 472 DTAVLSVIGVADLFFQGNAASGANFQFFQTFTIVGIMYLVMTFVI 516 >gi|296313423|ref|ZP_06863364.1| amino acid ABC transporter, permease protein [Neisseria polysaccharea ATCC 43768] gi|296840055|gb|EFH23993.1| amino acid ABC transporter, permease protein [Neisseria polysaccharea ATCC 43768] Length = 219 Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 58/181 (32%), Positives = 95/181 (52%), Gaps = 16/181 (8%) Query: 228 LIFGLPTLVLIALKY-----------QLHFDKPVLGQ--FNFIGGSTVSPE---FMSLYI 271 L+FGLP V+ A + +L + P+L Q F + G + + F I Sbjct: 32 LLFGLPVAVVTAYRIRPFYALARAYIELSRNTPLLIQLFFLYYGLPKMGIKWDGFTCGVI 91 Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 AL A+++AE VR+G++AVP+GQ+EA A+GL+ + R V LPQA P + + Sbjct: 92 ALVFLGASYMAEAVRAGILAVPKGQVEAGKAVGLSRFQVFRYVELPQAWAVAFPAVAANI 151 Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 L L+K +S+ AVG A+L+ V +I + E + + YL + + ++L + RL + Sbjct: 152 LFLMKETSVISAVGIAELLFVTKDVIGMDYKTNEALFLLFAAYLIILLPVSLLVRRLENR 211 Query: 392 I 392 I Sbjct: 212 I 212 >gi|293608329|ref|ZP_06690632.1| predicted protein [Acinetobacter sp. SH024] gi|292828902|gb|EFF87264.1| predicted protein [Acinetobacter sp. SH024] gi|325121937|gb|ADY81460.1| glutamate/aspartate transport protein (ABC superfamily, membrane) [Acinetobacter calcoaceticus PHEA-2] Length = 280 Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 42/123 (34%), Positives = 74/123 (60%) Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 AL YTAA ++E +R+G+ V RGQ AA A+G T ++ R V+LP A R++ P +TS+ Sbjct: 150 ALGLYTAARVSEHIRAGINTVSRGQKFAASAMGFTTAQSYRYVILPVAYRTVWPTITSEA 209 Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 +N+ KNS++ A+ + + T+ +T Q I I+++ +YL ++ I M + + Sbjct: 210 MNVFKNSAVLYALSVLNFFAYTKTMREETSQDIIILILSTPVYLIITYSIKFVMAWIEKR 269 Query: 392 IAL 394 +A+ Sbjct: 270 MAV 272 Score = 41.2 bits (95), Expect = 0.30, Method: Compositional matrix adjust. Identities = 23/56 (41%), Positives = 33/56 (58%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147 G W A + A ++G+L+G R NK +A+I YVE+FRNIP +V +FF Sbjct: 54 GVFTMVWTAIIAFLIAFLLGSLLGVIRTLPNKPLAFIGNCYVEIFRNIPLIVQLFF 109 >gi|257882304|ref|ZP_05661957.1| amino acid ABC transporter [Enterococcus faecium 1,231,502] gi|294623622|ref|ZP_06702460.1| amino acid ABC transporter, permease protein [Enterococcus faecium U0317] gi|257817962|gb|EEV45290.1| amino acid ABC transporter [Enterococcus faecium 1,231,502] gi|291596948|gb|EFF28161.1| amino acid ABC transporter, permease protein [Enterococcus faecium U0317] Length = 213 Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 60/221 (27%), Positives = 111/221 (50%), Gaps = 41/221 (18%) Query: 185 TNAKIFVFSFV----LGIVLSLFATRLSRHF---------HEKTGKALPLLYISTFLIFG 231 T K+F+F+ + LGIVL+L LS HF + + PLL F+ +G Sbjct: 17 TTLKLFLFTLIGSLPLGIVLAL---GLSLHFKPLRYLLQTYVWVMRGTPLLLQLIFIFYG 73 Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291 LPT+ ++ FD+ F + IA AA+ AEI R G+ + Sbjct: 74 LPTIGIV-------FDR-----------------FEAALIAFILNYAAYFAEIFRGGIQS 109 Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 +P+GQ EAA L L+ + +++PQ + ++P + ++ +NL+K+SSL +G D++ Sbjct: 110 IPQGQYEAAQVLQLSPFQTVTKIVIPQVTKIVLPSVGNEVINLVKDSSLIYILGLGDVMR 169 Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 G + + + ++ + + IYL+L+ ++ + M ++ K+ Sbjct: 170 AGKIAMERDATLLPLLGVAI-IYLTLTGILTIIMKQVEGKL 209 >gi|257088688|ref|ZP_05583049.1| ABC amino acid transporter [Enterococcus faecalis CH188] gi|256997500|gb|EEU84020.1| ABC amino acid transporter [Enterococcus faecalis CH188] Length = 507 Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 63/225 (28%), Positives = 108/225 (48%), Gaps = 36/225 (16%) Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRH-----FHEKTGKALPLLY 223 MFL GL+ + T V LG+++ +F T F +K G + +Y Sbjct: 277 MFLRGTGLTLFIALIGT-----VVGTTLGLLIGVFRTIPDSENPVARFFQKLGNLILSIY 331 Query: 224 ISTFLIFGLPTLVL-------IALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 I F G P +V +AL + + D+ V +L+I +S Sbjct: 332 IEVFR--GTPMMVQAMVIFYGLALAFGISLDRTV----------------AALFI-VSVN 372 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 T A+++EIVR G+ AV +GQ EAA A+G+TH + R V++PQ +R+I+P ++++ +K Sbjct: 373 TGAYMSEIVRGGIFAVDKGQFEAAQAIGMTHGQTMRKVVIPQVLRNILPATGNEFVINIK 432 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 ++++ +G ADL G Q + I +YL ++ +I Sbjct: 433 DTAVLSVIGVADLFFQGNAASGANFQFFQTFTIVGIMYLVMTFVI 477 >gi|238798510|ref|ZP_04641989.1| Inner membrane amino-acid ABC transporter permease protein yhdY [Yersinia mollaretii ATCC 43969] gi|238717672|gb|EEQ09509.1| Inner membrane amino-acid ABC transporter permease protein yhdY [Yersinia mollaretii ATCC 43969] Length = 367 Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 35/76 (46%), Positives = 54/76 (71%) Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335 + +A++AE+VR GL A+P+GQ EAA +LGL + K LV+LPQA++ +IP L + + L Sbjct: 241 FQSAYVAEVVRGGLQALPKGQTEAAESLGLGYWKTQGLVILPQALKMVIPGLVNTIIALF 300 Query: 336 KNSSLAVAVGFADLVS 351 K++SL + +G DL S Sbjct: 301 KDTSLVIIIGLFDLFS 316 >gi|150378347|ref|YP_001314941.1| polar amino acid ABC transporter, inner membrane subunit [Sinorhizobium medicae WSM419] gi|150032894|gb|ABR65008.1| polar amino acid ABC transporter, inner membrane subunit [Sinorhizobium medicae WSM419] Length = 384 Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 32/88 (36%), Positives = 60/88 (68%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 +F+ I +S + +A++AE+VR GL A+P+GQ E A +LGL++ + ++LPQA++ +I Sbjct: 247 KFLRALIGVSLFASAYMAEVVRGGLQAIPKGQYEGADSLGLSYWQKMGFIVLPQALKLVI 306 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSV 352 P + + ++ L K++SL +G DL+ + Sbjct: 307 PGIVNTFIGLFKDTSLVSIIGMFDLLGI 334 >gi|260662189|ref|ZP_05863085.1| ABC transporter permease component [Lactobacillus fermentum 28-3-CHN] gi|260553572|gb|EEX26464.1| ABC transporter permease component [Lactobacillus fermentum 28-3-CHN] Length = 223 Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 58/210 (27%), Positives = 105/210 (50%), Gaps = 32/210 (15%) Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY-----QLHF 246 F ++G V + T SR + + LY+ F I +PT+VL+ L Y QLH Sbjct: 35 FGLIVGTVFGVLRTTKSRVL-----RFILRLYLEIFRI--IPTVVLLFLVYYILPRQLHI 87 Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306 + P ++M++ +A S + AA ++IVR + +VP+ Q E+ +A+GLT Sbjct: 88 NMP--------------ADWMAV-LAFSLWVAAEFSDIVRGAIQSVPQHQRESGLAIGLT 132 Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 + R +LLPQAM+ +P + ++K +SL + + D+++VG II Sbjct: 133 RFQLFRYILLPQAMKLEVPAAINLATRVVKTTSLLMIISIMDVINVGQQIIEANNSTYPT 192 Query: 367 ILIWM-----FIYLSLSIMIALFMNRLNAK 391 + W+ F+Y + +++L+ +L A+ Sbjct: 193 GVFWVYGLIFFLYFIVDYLLSLWARKLTAR 222 Score = 42.0 bits (97), Expect = 0.15, Method: Compositional matrix adjust. Identities = 20/68 (29%), Positives = 42/68 (61%) Query: 82 DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141 + S + ++ G + W+A + I+GT+ G R + ++++ +I R+Y+E+FR IP Sbjct: 11 EGSNFSRLMGGLWVSVWIAVVSLFFGLIVGTVFGVLRTTKSRVLRFILRLYLEIFRIIPT 70 Query: 142 LVVIFFLY 149 +V++F +Y Sbjct: 71 VVLLFLVY 78 >gi|229587873|ref|YP_002869992.1| putative amino acid ABC transporter membrane protein [Pseudomonas fluorescens SBW25] gi|229359739|emb|CAY46588.1| putative amino acid ABC transport system, membrane protein [Pseudomonas fluorescens SBW25] Length = 229 Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 60/193 (31%), Positives = 102/193 (52%), Gaps = 17/193 (8%) Query: 195 VLGIVLS--LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252 +LG++L+ L R S+ ++ ++ LP YI F G P LV + L Y L Sbjct: 29 ILGLILAIPLGVARASKRWYVRS---LPYAYI--FFFRGTPLLVQLFLVYY------GLA 77 Query: 253 QFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308 QF+ + S + P F ++ +TAA+IAEI+R + A+P G++EAA ALG++ Sbjct: 78 QFDAVRTSAMWPYLRDPFWCATATMTLHTAAYIAEILRGAIQAIPPGEIEAARALGMSKP 137 Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368 K ++LP+A R +P +++ + +LK SSLA V +L + TII + +++ Sbjct: 138 KTLFYIILPRAARIGLPAYSNEVILMLKASSLASTVTLLELTGMARTIIARNYLTVDMFF 197 Query: 369 IWMFIYLSLSIMI 381 YL +S ++ Sbjct: 198 TAGVFYLLMSYLL 210 >gi|224367957|ref|YP_002602120.1| GltK1 [Desulfobacterium autotrophicum HRM2] gi|223690673|gb|ACN13956.1| GltK1 [Desulfobacterium autotrophicum HRM2] Length = 218 Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 47/174 (27%), Positives = 96/174 (55%), Gaps = 11/174 (6%) Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282 Y +T I + T LI + + L+F P+ I G + +F S IA + A++ A Sbjct: 53 YPATLFINLMRTQPLILVIFWLYFLMPL------ILGKPIG-DFTSASIAFILFEASYFA 105 Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342 EI+R+G+ ++P+GQ EAA + G T+ + R ++PQA+++++P L +Q + + +++SLA Sbjct: 106 EIIRAGIQSIPKGQAEAAYSSGFTYWQTMRYFIIPQALKNMLPSLITQGVVVFQDTSLAY 165 Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 +G + + + + ++ E+ L +YL ++ ++R+ ++ LK Sbjct: 166 VIGLREFLRSANVVDAREMRSFELYLFVGLVYL----LVCFSISRIGKRMELKR 215 >gi|150396325|ref|YP_001326792.1| polar amino acid ABC transporter inner membrane subunit [Sinorhizobium medicae WSM419] gi|150027840|gb|ABR59957.1| polar amino acid ABC transporter, inner membrane subunit [Sinorhizobium medicae WSM419] Length = 384 Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 32/88 (36%), Positives = 60/88 (68%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 +F+ I +S + +A++AE+VR GL A+P+GQ E A +LGL++ + ++LPQA++ +I Sbjct: 247 KFLRALIGVSLFASAYMAEVVRGGLQAIPKGQYEGADSLGLSYWQKMGFIVLPQALKLVI 306 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSV 352 P + + ++ L K++SL +G DL+ + Sbjct: 307 PGIVNTFIGLFKDTSLVSIIGMFDLLGI 334 >gi|322390972|ref|ZP_08064478.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus parasanguinis ATCC 903] gi|321142347|gb|EFX37819.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus parasanguinis ATCC 903] Length = 520 Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 41/109 (37%), Positives = 65/109 (59%) Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 +S T A+++EIVR G++AV GQ EAA ALG+TH + R V+LPQ +R+I+P ++++ Sbjct: 383 VSINTGAYMSEIVRGGILAVDPGQFEAATALGMTHGQTMRKVVLPQVVRNILPATGNEFV 442 Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 +K++S+ + +L G TI Q Q I IY+ L+ I Sbjct: 443 INIKDTSVLNVISVVELYFTGNTIATQNYQYFPTFTIIAVIYIVLTFTI 491 >gi|315303607|ref|ZP_07874151.1| probable amino-acid ABC transporter permease protein YckA [Listeria ivanovii FSL F6-596] gi|313628027|gb|EFR96616.1| probable amino-acid ABC transporter permease protein YckA [Listeria ivanovii FSL F6-596] Length = 213 Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 38/124 (30%), Positives = 76/124 (61%), Gaps = 1/124 (0%) Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327 ++++A AA+ AEI R G +++ GQ E+A LGLT+ + R ++LPQ ++ ++P + Sbjct: 86 AVFLAFILNYAAYFAEIFRGGFLSIESGQYESAKVLGLTYAQTLRKIVLPQVVKRVLPAI 145 Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387 ++ +NL+K+SSL +G DL+ G +++ I ++L+ IYL+L+ ++ + + Sbjct: 146 GNEVINLVKDSSLVYILGIGDLLRAGKIAMSRDVTLIPLVLVAA-IYLALTAILTVLFKQ 204 Query: 388 LNAK 391 L + Sbjct: 205 LEKR 208 >gi|307278646|ref|ZP_07559716.1| ABC transporter, permease protein [Enterococcus faecalis TX0860] gi|306504706|gb|EFM73906.1| ABC transporter, permease protein [Enterococcus faecalis TX0860] Length = 546 Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 63/225 (28%), Positives = 108/225 (48%), Gaps = 36/225 (16%) Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRH-----FHEKTGKALPLLY 223 MFL GL+ + T V LG+++ +F T F +K G + +Y Sbjct: 316 MFLRGAGLTLFIALIGT-----VVGTTLGLLIGVFRTIPDSENPVARFFQKLGNLILSIY 370 Query: 224 ISTFLIFGLPTLVL-------IALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 I F G P +V +AL + + D+ V +L+I +S Sbjct: 371 IEVFR--GTPMMVQAMVIFYGLALAFGISLDRTV----------------AALFI-VSVN 411 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 T A+++EIVR G+ AV +GQ EAA A+G+TH + R V++PQ +R+I+P ++++ +K Sbjct: 412 TGAYMSEIVRGGIFAVDKGQFEAAQAIGMTHGQTMRKVVIPQVLRNILPATGNEFVINIK 471 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 ++++ +G ADL G Q + I +YL ++ +I Sbjct: 472 DTAVLSVIGVADLFFQGNAASGANFQFFQTFTIVGIMYLVMTFVI 516 >gi|50119203|ref|YP_048370.1| L-amino acid ABC transporter permease [Pectobacterium atrosepticum SCRI1043] gi|49609729|emb|CAG73163.1| L-amino acid ABC transporter permease protein [Pectobacterium atrosepticum SCRI1043] Length = 364 Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 37/93 (39%), Positives = 63/93 (67%), Gaps = 1/93 (1%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G+T+ +L + + + +A++AE+VR GL A+P+GQ EAA +LGL + + LV+LPQ Sbjct: 222 GTTIDKLLRAL-VGVILFQSAYVAEVVRGGLQALPKGQYEAAESLGLGYWRMQGLVILPQ 280 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 A++ +IP L + ++L K++SL + +G DL S Sbjct: 281 ALKMVIPGLVNTIISLFKDTSLVIIIGLFDLFS 313 >gi|331697742|ref|YP_004333981.1| polar amino acid ABC transporter inner membrane subunit [Pseudonocardia dioxanivorans CB1190] gi|326952431|gb|AEA26128.1| polar amino acid ABC transporter, inner membrane subunit [Pseudonocardia dioxanivorans CB1190] Length = 215 Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 45/129 (34%), Positives = 78/129 (60%), Gaps = 6/129 (4%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F I L YTAAF+ E++RSG+ VP GQ EA+ ALG + +++PQA+R+++P Sbjct: 85 FTRACIGLILYTAAFVCEVLRSGINTVPVGQAEASRALGFGFNQTLTTIVMPQAVRAVVP 144 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTI--INQTGQAIEIILIWMFI-YLSLSIMIA 382 PLT+ + LLKN++ +A GF+ + GG +++ G + + L+W+ + +L L + + Sbjct: 145 PLTNVQIALLKNTT--IASGFS-VFQAGGIYQELSENGYNVLVGLLWIALGFLILVVPLT 201 Query: 383 LFMNRLNAK 391 L L+ + Sbjct: 202 LLQRNLDRR 210 >gi|300119246|ref|ZP_07056940.1| amino acid ABC transporter, permease protein [Bacillus cereus SJ1] gi|298723354|gb|EFI64102.1| amino acid ABC transporter, permease protein [Bacillus cereus SJ1] Length = 232 Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 49/157 (31%), Positives = 92/157 (58%), Gaps = 14/157 (8%) Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244 T + + +F++GI+L+ T L+R + + + +Y+S +I G P LV + + + Sbjct: 33 TTIPLTLITFIIGIILATL-TALARISGSRILQWIARIYVS--IIRGTPLLVQL---FII 86 Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304 + P L V P + + I S A+ +EI+R+ ++++P+GQ EAA +G Sbjct: 87 FYGLPTLN-------VEVEP-YTAAVIGFSLNVGAYASEIIRASILSIPKGQWEAAYTIG 138 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341 +T+ +A + V+LPQA R IPPL++ +++L+K++SLA Sbjct: 139 MTYPQALKRVILPQATRVSIPPLSNTFISLVKDTSLA 175 Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust. Identities = 15/41 (36%), Positives = 26/41 (63%) Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 I+ TL R+S ++++ WI R+YV + R P LV +F ++ Sbjct: 47 ILATLTALARISGSRILQWIARIYVSIIRGTPLLVQLFIIF 87 >gi|255024101|ref|ZP_05296087.1| hypothetical protein LmonocyFSL_12858 [Listeria monocytogenes FSL J1-208] Length = 125 Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 37/114 (32%), Positives = 71/114 (62%), Gaps = 1/114 (0%) Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 AA+ AEI R G +++ GQ E+A LGLT+ + R ++LPQ ++ ++P + ++ +NL+K+ Sbjct: 8 AAYFAEIFRGGFLSIENGQYESAKVLGLTYGQTLRKIVLPQVVKRVLPAIGNEVINLVKD 67 Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 SSL +G DL+ G +++ I ++L+ IYL+L+ ++ + +L + Sbjct: 68 SSLVYILGIGDLLRAGKIAMSRDVTLIPLVLVAA-IYLALTAVLTVLFKQLEKR 120 >gi|261819587|ref|YP_003257693.1| polar amino acid ABC transporter inner membrane protein [Pectobacterium wasabiae WPP163] gi|261603600|gb|ACX86086.1| polar amino acid ABC transporter, inner membrane subunit [Pectobacterium wasabiae WPP163] Length = 364 Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 37/93 (39%), Positives = 63/93 (67%), Gaps = 1/93 (1%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G+T+ +L + + + +A++AE+VR GL A+P+GQ EAA +LGL + + LV+LPQ Sbjct: 222 GTTIDKLLRAL-VGVILFQSAYVAEVVRGGLQALPKGQYEAAESLGLGYWRMQGLVILPQ 280 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 A++ +IP L + ++L K++SL + +G DL S Sbjct: 281 ALKMVIPGLVNTIISLFKDTSLVIIIGLFDLFS 313 >gi|254804666|ref|YP_003082887.1| polar amino acid transport system permease protein [Neisseria meningitidis alpha14] gi|254668208|emb|CBA04964.1| polar amino acid transport system permease protein [Neisseria meningitidis alpha14] Length = 227 Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 36/121 (29%), Positives = 67/121 (55%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I S A+ +E +R+ +++VP+GQ EA ++G+T+ + R ++ PQA R +PPL+++ Sbjct: 100 IGFSLNVGAYASETIRAAILSVPKGQWEAGFSIGMTYMQTFRRIVAPQAFRVAVPPLSNE 159 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++ L KN+SLA V +L V N+T + + + +Y ++ L RL Sbjct: 160 FIGLFKNTSLAAVVTVTELFRVAQETANRTYDFLPVYIEAALVYWCFCKVLFLIQARLEK 219 Query: 391 K 391 + Sbjct: 220 R 220 >gi|227520033|ref|ZP_03950082.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus faecalis TX0104] gi|229546924|ref|ZP_04435649.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus faecalis TX1322] gi|229550512|ref|ZP_04439237.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus faecalis ATCC 29200] gi|293382718|ref|ZP_06628643.1| amino acid ABC transporter, amino acid-binding/permease protein [Enterococcus faecalis R712] gi|293388099|ref|ZP_06632627.1| amino acid ABC transporter, amino acid-binding/permease protein [Enterococcus faecalis S613] gi|307268500|ref|ZP_07549875.1| ABC transporter, permease protein [Enterococcus faecalis TX4248] gi|307276436|ref|ZP_07557559.1| ABC transporter, permease protein [Enterococcus faecalis TX2134] gi|307286974|ref|ZP_07567049.1| ABC transporter, permease protein [Enterococcus faecalis TX0109] gi|312908613|ref|ZP_07767555.1| ABC transporter, permease protein [Enterococcus faecalis DAPTO 512] gi|312909239|ref|ZP_07768096.1| ABC transporter, permease protein [Enterococcus faecalis DAPTO 516] gi|312952647|ref|ZP_07771511.1| ABC transporter, permease protein [Enterococcus faecalis TX0102] gi|227072581|gb|EEI10544.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus faecalis TX0104] gi|229304369|gb|EEN70365.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus faecalis ATCC 29200] gi|229307852|gb|EEN73839.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus faecalis TX1322] gi|291079878|gb|EFE17242.1| amino acid ABC transporter, amino acid-binding/permease protein [Enterococcus faecalis R712] gi|291082550|gb|EFE19513.1| amino acid ABC transporter, amino acid-binding/permease protein [Enterococcus faecalis S613] gi|306501920|gb|EFM71209.1| ABC transporter, permease protein [Enterococcus faecalis TX0109] gi|306506916|gb|EFM76063.1| ABC transporter, permease protein [Enterococcus faecalis TX2134] gi|306515161|gb|EFM83701.1| ABC transporter, permease protein [Enterococcus faecalis TX4248] gi|310625400|gb|EFQ08683.1| ABC transporter, permease protein [Enterococcus faecalis DAPTO 512] gi|310629435|gb|EFQ12718.1| ABC transporter, permease protein [Enterococcus faecalis TX0102] gi|311290481|gb|EFQ69037.1| ABC transporter, permease protein [Enterococcus faecalis DAPTO 516] gi|315026795|gb|EFT38727.1| ABC transporter, permease protein [Enterococcus faecalis TX2137] gi|315032967|gb|EFT44899.1| ABC transporter, permease protein [Enterococcus faecalis TX0017] gi|315147131|gb|EFT91147.1| ABC transporter, permease protein [Enterococcus faecalis TX4244] gi|315153569|gb|EFT97585.1| ABC transporter, permease protein [Enterococcus faecalis TX0031] gi|315156251|gb|EFU00268.1| ABC transporter, permease protein [Enterococcus faecalis TX0043] gi|315158604|gb|EFU02621.1| ABC transporter, permease protein [Enterococcus faecalis TX0312] gi|315165862|gb|EFU09879.1| ABC transporter, permease protein [Enterococcus faecalis TX1302] gi|315171420|gb|EFU15437.1| ABC transporter, permease protein [Enterococcus faecalis TX1342] gi|315172654|gb|EFU16671.1| ABC transporter, permease protein [Enterococcus faecalis TX1346] gi|327534044|gb|AEA92878.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus faecalis OG1RF] Length = 546 Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 63/225 (28%), Positives = 108/225 (48%), Gaps = 36/225 (16%) Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRH-----FHEKTGKALPLLY 223 MFL GL+ + T V LG+++ +F T F +K G + +Y Sbjct: 316 MFLRGAGLTLFIALIGT-----VVGTTLGLLIGVFRTIPDSENPVARFFQKLGNLILSIY 370 Query: 224 ISTFLIFGLPTLVL-------IALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 I F G P +V +AL + + D+ V +L+I +S Sbjct: 371 IEVFR--GTPMMVQAMVIFYGLALAFGISLDRTV----------------AALFI-VSVN 411 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 T A+++EIVR G+ AV +GQ EAA A+G+TH + R V++PQ +R+I+P ++++ +K Sbjct: 412 TGAYMSEIVRGGIFAVDKGQFEAAQAIGMTHGQTMRKVVIPQVLRNILPATGNEFVINIK 471 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 ++++ +G ADL G Q + I +YL ++ +I Sbjct: 472 DTAVLSVIGVADLFFQGNAASGANFQFFQTFTIVGIMYLVMTFVI 516 >gi|167748300|ref|ZP_02420427.1| hypothetical protein ANACAC_03044 [Anaerostipes caccae DSM 14662] gi|167652292|gb|EDR96421.1| hypothetical protein ANACAC_03044 [Anaerostipes caccae DSM 14662] Length = 226 Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 54/209 (25%), Positives = 109/209 (52%), Gaps = 28/209 (13%) Query: 196 LGIVLSLFATRLSRHFHEKTGKALPL---LYISTFLIFGLPTLVLIALKYQL---HFDKP 249 LG VL+L R EK GK+ L Y+ +I G PT+ + + + + D Sbjct: 40 LGTVLALM-----RLTAEKKGKSTVLSKIAYVYIDIIRGTPTVTQLMIMFFVILKGVDGL 94 Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309 ++G F +AA+++EI+R+G++AV +GQME +LGL++ + Sbjct: 95 IVGTVTF-----------------GLNSAAYVSEIIRAGILAVDQGQMEGGRSLGLSYGQ 137 Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369 + ++LPQA+++I+P L ++++ L+K +++ V DL +I++T +A+ ++ Sbjct: 138 TMKDIILPQAIKNILPALGNEFIVLIKETAILGYVSIVDLSKAADFVISRTYEALTPLIG 197 Query: 370 WMFIYLSLSIMIALFMNRLNAKIALKEKK 398 IY + ++ L +N + ++ +K+ Sbjct: 198 TAVIYYLIVKVLTLVLNAVERRLRQSDKR 226 >gi|307274211|ref|ZP_07555419.1| ABC transporter, permease protein [Enterococcus faecalis TX0855] gi|307291685|ref|ZP_07571560.1| ABC transporter, permease protein [Enterococcus faecalis TX0411] gi|312904644|ref|ZP_07763799.1| ABC transporter, permease protein [Enterococcus faecalis TX0635] gi|306497304|gb|EFM66846.1| ABC transporter, permease protein [Enterococcus faecalis TX0411] gi|306509173|gb|EFM78235.1| ABC transporter, permease protein [Enterococcus faecalis TX0855] gi|310631996|gb|EFQ15279.1| ABC transporter, permease protein [Enterococcus faecalis TX0635] gi|315028836|gb|EFT40768.1| ABC transporter, permease protein [Enterococcus faecalis TX4000] gi|315145376|gb|EFT89392.1| ABC transporter, permease protein [Enterococcus faecalis TX2141] Length = 546 Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 63/225 (28%), Positives = 108/225 (48%), Gaps = 36/225 (16%) Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRH-----FHEKTGKALPLLY 223 MFL GL+ + T V LG+++ +F T F +K G + +Y Sbjct: 316 MFLRGAGLTLFIALIGT-----VVGTTLGLLIGVFRTIPDSENPVARFFQKLGNLILSIY 370 Query: 224 ISTFLIFGLPTLVL-------IALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 I F G P +V +AL + + D+ V +L+I +S Sbjct: 371 IEVFR--GTPMMVQAMVIFYGLALAFGISLDRTV----------------AALFI-VSVN 411 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 T A+++EIVR G+ AV +GQ EAA A+G+TH + R V++PQ +R+I+P ++++ +K Sbjct: 412 TGAYMSEIVRGGIFAVDKGQFEAAQAIGMTHGQTMRKVVIPQVLRNILPATGNEFVINIK 471 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 ++++ +G ADL G Q + I +YL ++ +I Sbjct: 472 DTAVLSVIGVADLFFQGNAASGANFQFFQTFTIVGIMYLVMTFVI 516 >gi|282849230|ref|ZP_06258615.1| ABC transporter, permease protein [Veillonella parvula ATCC 17745] gi|282580934|gb|EFB86332.1| ABC transporter, permease protein [Veillonella parvula ATCC 17745] Length = 218 Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 38/120 (31%), Positives = 67/120 (55%), Gaps = 1/120 (0%) Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 AA++ EI R G+ ++ RGQ E A LG T+ + R ++LPQ + ++PPL ++ +NLLK+ Sbjct: 100 AAYLCEIFRGGIQSISRGQYEGAKVLGFTYAQTMRKIILPQMFKRVLPPLANETINLLKD 159 Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 +SL + D++ + +I+ Q I L+ YL + ++ N L + A+ E Sbjct: 160 TSLVYVLAMNDILRITKSIV-QRDFDISAFLVAALFYLIFTFILTNIFNYLERRFAVYED 218 >gi|225076169|ref|ZP_03719368.1| hypothetical protein NEIFLAOT_01201 [Neisseria flavescens NRL30031/H210] gi|224952512|gb|EEG33721.1| hypothetical protein NEIFLAOT_01201 [Neisseria flavescens NRL30031/H210] Length = 219 Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 58/181 (32%), Positives = 95/181 (52%), Gaps = 16/181 (8%) Query: 228 LIFGLPTLVLIALKY-----------QLHFDKPVLGQ--FNFIGGSTVSPE---FMSLYI 271 L+FGLP V+ A + +L + P+L Q F + G + + F I Sbjct: 32 LLFGLPVAVVTAYRIRPFYALARAYIELSRNTPLLIQLFFLYYGLPKMGIKWDGFTCGVI 91 Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 AL A+++AE VR+G++AVP+GQ+EA A+GL+ + R V LPQA P + + Sbjct: 92 ALVFLGASYMAEAVRAGILAVPKGQVEAGKAVGLSRFQVFRYVELPQAWAVAFPAVAANI 151 Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 L L+K +S+ AVG A+L+ V +I + E + + YL + + ++L + RL + Sbjct: 152 LFLMKETSVISAVGIAELLFVTKDVIGMDYKTNEALFLLFAAYLIILLPVSLLVRRLENR 211 Query: 392 I 392 I Sbjct: 212 I 212 >gi|307942364|ref|ZP_07657715.1| general L-amino acid transport system permease protein AapM [Roseibium sp. TrichSKD4] gi|307774650|gb|EFO33860.1| general L-amino acid transport system permease protein AapM [Roseibium sp. TrichSKD4] Length = 384 Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 33/87 (37%), Positives = 60/87 (68%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 + + + I ++ ++AA++AE+VR GL A+P+GQ E A+ALGL L++LPQA++ +I Sbjct: 246 KLLRVLIGVTLFSAAYMAEVVRGGLQAIPKGQYEGAMALGLRFWPMMYLIILPQALKLVI 305 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVS 351 P + + ++ L K+++L + VG DL+ Sbjct: 306 PGIVNTFIGLFKDTTLVLIVGMFDLLG 332 >gi|282599865|ref|ZP_06257391.1| glutamate/aspartate ABC transporter, permease protein [Providencia rustigianii DSM 4541] gi|282567427|gb|EFB72962.1| glutamate/aspartate ABC transporter, permease protein [Providencia rustigianii DSM 4541] Length = 175 Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 39/134 (29%), Positives = 79/134 (58%), Gaps = 1/134 (0%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P ++ AL+ T+A++A V++G++A+ +GQ A ++LG + ++LPQA+R + Sbjct: 19 PGITAVVCALALITSAYLAHAVKAGILAIGKGQWHAGMSLGFNRWQVLGYIVLPQALRMM 78 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN-QTGQAIEIILIWMFIYLSLSIMIA 382 +P +Q++ L+K++SLA VG A+L + + N + +E+ L FIY + + + Sbjct: 79 VPSFINQWVALIKDTSLAYIVGVAELSFLATQVNNREMVYPLEVFLFVAFIYFVMCLSVE 138 Query: 383 LFMNRLNAKIALKE 396 + N++ K++ K Sbjct: 139 IIANQIAKKLSDKN 152 >gi|157145290|ref|YP_001452609.1| hypothetical protein CKO_01027 [Citrobacter koseri ATCC BAA-895] gi|157082495|gb|ABV12173.1| hypothetical protein CKO_01027 [Citrobacter koseri ATCC BAA-895] Length = 222 Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 52/208 (25%), Positives = 104/208 (50%), Gaps = 20/208 (9%) Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251 F +LG +L+L + LP+ +++ F I LIA + +++ P Sbjct: 32 FGLLLGFILALM----------RMSPLLPVRWLARFYISIFRGTPLIAQLFMIYYGLPQF 81 Query: 252 G-QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 G + + I + I LS TAA+ +E +R+ + ++ +GQ EAA ++G+T + Sbjct: 82 GIELDPIPAAM---------IGLSLNTAAYTSETLRAAISSIDKGQWEAAASIGMTPWQT 132 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370 R +LPQA R +PPL++ +++L+K++SLA + +L I ++T + + L Sbjct: 133 LRRAILPQAARVALPPLSNSFISLVKDTSLAATIQVPELFRQAQLITSRTLEVFTMYLAA 192 Query: 371 MFIYLSLSIMIALFMNRLNAKIALKEKK 398 IY ++ +++ N ++ +E+ Sbjct: 193 SLIYWVMATVLSALQNYFEEQLNRQERD 220 Score = 37.7 bits (86), Expect = 3.4, Method: Compositional matrix adjust. Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 8/97 (8%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G V T L+ GM ++G ++ R+S V W+ R Y+ +FR P + +F + Sbjct: 15 LLKGAVFTLQLSIGGMFFGLLLGFILALMRMSPLLPVRWLARFYISIFRGTPLIAQLFMI 74 Query: 149 YKSV----LSVLPIPDHSIVLPFGMFLNNRGLSFPTL 181 Y + + + PIP I G+ LN + TL Sbjct: 75 YYGLPQFGIELDPIPAAMI----GLSLNTAAYTSETL 107 >gi|15640041|ref|NP_062593.1| amino acid ABC transproter, permease protein [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121591472|ref|ZP_01678745.1| amino acid ABC transporter, permease protein [Vibrio cholerae 2740-80] gi|121730358|ref|ZP_01682715.1| amino acid ABC transporter, permease protein [Vibrio cholerae V52] gi|147675477|ref|YP_001218403.1| amino acid ABC transporter, permease protein [Vibrio cholerae O395] gi|153212968|ref|ZP_01948562.1| amino acid ABC transporter, permease protein [Vibrio cholerae 1587] gi|153819843|ref|ZP_01972510.1| amino acid ABC transporter, permease protein [Vibrio cholerae NCTC 8457] gi|227080246|ref|YP_002808797.1| amino acid ABC transproter, permease protein [Vibrio cholerae M66-2] gi|229508295|ref|ZP_04397799.1| amino acid ABC transporter permease protein [Vibrio cholerae BX 330286] gi|229508866|ref|ZP_04398357.1| amino acid ABC transporter permease protein [Vibrio cholerae B33] gi|229515951|ref|ZP_04405408.1| amino acid ABC transporter permease protein [Vibrio cholerae TMA 21] gi|229517137|ref|ZP_04406583.1| amino acid ABC transporter permease protein [Vibrio cholerae RC9] gi|229520182|ref|ZP_04409609.1| amino acid ABC transporter permease protein [Vibrio cholerae TM 11079-80] gi|229530204|ref|ZP_04419593.1| amino acid ABC transporter permease protein [Vibrio cholerae 12129(1)] gi|229606569|ref|YP_002877217.1| amino acid ABC transporter permease protein [Vibrio cholerae MJ-1236] gi|254291130|ref|ZP_04961927.1| amino acid ABC transporter, permease protein [Vibrio cholerae AM-19226] gi|254851574|ref|ZP_05240924.1| amino acid ABC transporter [Vibrio cholerae MO10] gi|255746808|ref|ZP_05420754.1| amino acid ABC transporter permease protein [Vibrio cholera CIRS 101] gi|262167098|ref|ZP_06034813.1| amino acid ABC transporter permease protein [Vibrio cholerae RC27] gi|297581956|ref|ZP_06943876.1| amino acid ABC transporter [Vibrio cholerae RC385] gi|298501195|ref|ZP_07010994.1| amino acid ABC transporter [Vibrio cholerae MAK 757] gi|9654400|gb|AAF93187.1| amino acid ABC transproter, permease protein [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121546674|gb|EAX56856.1| amino acid ABC transporter, permease protein [Vibrio cholerae 2740-80] gi|121627889|gb|EAX60471.1| amino acid ABC transporter, permease protein [Vibrio cholerae V52] gi|124116194|gb|EAY35014.1| amino acid ABC transporter, permease protein [Vibrio cholerae 1587] gi|126509604|gb|EAZ72198.1| amino acid ABC transporter, permease protein [Vibrio cholerae NCTC 8457] gi|146317360|gb|ABQ21899.1| amino acid ABC transporter, permease protein [Vibrio cholerae O395] gi|150422975|gb|EDN14925.1| amino acid ABC transporter, permease protein [Vibrio cholerae AM-19226] gi|227008134|gb|ACP04346.1| amino acid ABC transproter, permease protein [Vibrio cholerae M66-2] gi|227011988|gb|ACP08198.1| amino acid ABC transproter, permease protein [Vibrio cholerae O395] gi|229332337|gb|EEN97824.1| amino acid ABC transporter permease protein [Vibrio cholerae 12129(1)] gi|229342776|gb|EEO07767.1| amino acid ABC transporter permease protein [Vibrio cholerae TM 11079-80] gi|229346200|gb|EEO11172.1| amino acid ABC transporter permease protein [Vibrio cholerae RC9] gi|229347051|gb|EEO12013.1| amino acid ABC transporter permease protein [Vibrio cholerae TMA 21] gi|229354141|gb|EEO19073.1| amino acid ABC transporter permease protein [Vibrio cholerae B33] gi|229354568|gb|EEO19490.1| amino acid ABC transporter permease protein [Vibrio cholerae BX 330286] gi|229369224|gb|ACQ59647.1| amino acid ABC transporter permease protein [Vibrio cholerae MJ-1236] gi|254847279|gb|EET25693.1| amino acid ABC transporter [Vibrio cholerae MO10] gi|255735565|gb|EET90964.1| amino acid ABC transporter permease protein [Vibrio cholera CIRS 101] gi|262024484|gb|EEY43170.1| amino acid ABC transporter permease protein [Vibrio cholerae RC27] gi|297533823|gb|EFH72664.1| amino acid ABC transporter [Vibrio cholerae RC385] gi|297540067|gb|EFH76129.1| amino acid ABC transporter [Vibrio cholerae MAK 757] gi|327482922|gb|AEA77329.1| Amino acid ABC transporter, permease protein [Vibrio cholerae LMA3894-4] Length = 223 Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 54/170 (31%), Positives = 95/170 (55%), Gaps = 13/170 (7%) Query: 183 MDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV-LIALK 241 + T ++ + V ++L+LF + R F L LYIS F G P LV L L Sbjct: 19 LGTTLEMASWGLVFALILALFLANI-RVFKVPVLDPLSQLYISFFR--GTPLLVQLFLLY 75 Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301 Y L P+L + F + I L+ + AA++AE +R+ +I + R QMEA++ Sbjct: 76 YGLPQVFPLLVGLD---------AFSAAVIGLTLHFAAYMAESIRAAIIGIDRSQMEASL 126 Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 ++G+T +A R ++LPQA R +P L + +++++K++SLA +G A++++ Sbjct: 127 SVGMTTSQAMRRIILPQATRVALPSLMNYFIDMIKSTSLAFTLGVAEIMA 176 >gi|320011628|gb|ADW06478.1| polar amino acid ABC transporter, inner membrane subunit [Streptomyces flavogriseus ATCC 33331] Length = 300 Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 40/128 (31%), Positives = 78/128 (60%), Gaps = 3/128 (2%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + L+ + AA+ AEIVR G++AV GQ+EAA ALG+ + R ++LPQAMRSI+P ++ Sbjct: 173 LGLALHQAAYAAEIVRGGVLAVDGGQLEAAAALGIPRLRQLRRIVLPQAMRSILPNAANE 232 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL---FMNR 387 ++L K +S+ + +L + + G+ + ++++ Y+ L+ ++++ ++ R Sbjct: 233 IISLFKGTSIVSVMAIGELFYQVQVVYGRNGRVVPLLMVATVWYILLTTVLSVLQHYVER 292 Query: 388 LNAKIALK 395 AK A++ Sbjct: 293 HYAKGAVR 300 >gi|289803650|ref|ZP_06534279.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 189 Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 38/128 (29%), Positives = 75/128 (58%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I LS TAA+ +E +R+ + A+ +GQ EAA ++G+T + R +LPQA R +PPL++ Sbjct: 60 IGLSLNTAAYTSETLRAAISAIDKGQWEAAASIGMTPWQTLRRAILPQAARVALPPLSNS 119 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 +++L+K++SLA + +L I ++T + + L IY ++ +++ N Sbjct: 120 FISLVKDTSLAATIQVPELFRQAQLITSRTLEVFTMYLAASLIYWVMATVLSALQNYFEN 179 Query: 391 KIALKEKK 398 ++ +E++ Sbjct: 180 QLNRQERE 187 >gi|329577432|gb|EGG58881.1| ABC transporter, permease protein [Enterococcus faecalis TX1467] Length = 546 Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 63/225 (28%), Positives = 108/225 (48%), Gaps = 36/225 (16%) Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRH-----FHEKTGKALPLLY 223 MFL GL+ + T V LG+++ +F T F +K G + +Y Sbjct: 316 MFLRGAGLTLFIALIGT-----VVGTTLGLLIGVFRTIPDSENPVARFFQKLGNLILSIY 370 Query: 224 ISTFLIFGLPTLVL-------IALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 I F G P +V +AL + + D+ V +L+I +S Sbjct: 371 IEVFR--GTPMMVQAMVIFYGLALAFGISLDRTV----------------AALFI-VSVN 411 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 T A+++EIVR G+ AV +GQ EAA A+G+TH + R V++PQ +R+I+P ++++ +K Sbjct: 412 TGAYMSEIVRGGIFAVDKGQFEAAQAIGMTHGQTMRKVVIPQVLRNILPATGNEFVINIK 471 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 ++++ +G ADL G Q + I +YL ++ +I Sbjct: 472 DTAVLSVIGVADLFFQGNAASGANFQFFQTFTIVGIMYLVMTFVI 516 >gi|255974748|ref|ZP_05425334.1| aminoacid ABC transporter [Enterococcus faecalis T2] gi|256964171|ref|ZP_05568342.1| amino acid ABC transporter substrate binding protein/permease [Enterococcus faecalis HIP11704] gi|255967620|gb|EET98242.1| aminoacid ABC transporter [Enterococcus faecalis T2] gi|256954667|gb|EEU71299.1| amino acid ABC transporter substrate binding protein/permease [Enterococcus faecalis HIP11704] Length = 507 Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 63/225 (28%), Positives = 108/225 (48%), Gaps = 36/225 (16%) Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRH-----FHEKTGKALPLLY 223 MFL GL+ + T V LG+++ +F T F +K G + +Y Sbjct: 277 MFLRGAGLTLFIALIGT-----VVGTTLGLLIGVFRTIPDSENPVARFFQKLGNLILSIY 331 Query: 224 ISTFLIFGLPTLVL-------IALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 I F G P +V +AL + + D+ V +L+I +S Sbjct: 332 IEVFR--GTPMMVQAMVIFYGLALAFGISLDRTV----------------AALFI-VSVN 372 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 T A+++EIVR G+ AV +GQ EAA A+G+TH + R V++PQ +R+I+P ++++ +K Sbjct: 373 TGAYMSEIVRGGIFAVDKGQFEAAQAIGMTHGQTMRKVVIPQVLRNILPATGNEFVINIK 432 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 ++++ +G ADL G Q + I +YL ++ +I Sbjct: 433 DTAVLSVIGVADLFFQGNAASGANFQFFQTFTIVGIMYLVMTFVI 477 >gi|255971748|ref|ZP_05422334.1| amino acid ABC transporter, permease [Enterococcus faecalis T1] gi|256618341|ref|ZP_05475187.1| amino acid ABC transporter substrate binding protein/permease [Enterococcus faecalis ATCC 4200] gi|256762043|ref|ZP_05502623.1| amino acid ABC transporter [Enterococcus faecalis T3] gi|256956823|ref|ZP_05560994.1| amino acid ABC transporter substrate binding protein/permease [Enterococcus faecalis DS5] gi|256960629|ref|ZP_05564800.1| ABC-type amino acid transporter [Enterococcus faecalis Merz96] gi|257078493|ref|ZP_05572854.1| ABC-type amino acid transporter [Enterococcus faecalis JH1] gi|257084184|ref|ZP_05578545.1| amino acid ABC transporter substrate binding protein/permease [Enterococcus faecalis Fly1] gi|257088011|ref|ZP_05582372.1| ABC-type amino acid transport system [Enterococcus faecalis D6] gi|257417614|ref|ZP_05594608.1| ABC-type amino acid transport system [Enterococcus faecalis AR01/DG] gi|255962766|gb|EET95242.1| amino acid ABC transporter, permease [Enterococcus faecalis T1] gi|256597868|gb|EEU17044.1| amino acid ABC transporter substrate binding protein/permease [Enterococcus faecalis ATCC 4200] gi|256683294|gb|EEU22989.1| amino acid ABC transporter [Enterococcus faecalis T3] gi|256947319|gb|EEU63951.1| amino acid ABC transporter substrate binding protein/permease [Enterococcus faecalis DS5] gi|256951125|gb|EEU67757.1| ABC-type amino acid transporter [Enterococcus faecalis Merz96] gi|256986523|gb|EEU73825.1| ABC-type amino acid transporter [Enterococcus faecalis JH1] gi|256992214|gb|EEU79516.1| amino acid ABC transporter substrate binding protein/permease [Enterococcus faecalis Fly1] gi|256996041|gb|EEU83343.1| ABC-type amino acid transport system [Enterococcus faecalis D6] gi|257159442|gb|EEU89402.1| ABC-type amino acid transport system [Enterococcus faecalis ARO1/DG] Length = 507 Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 63/225 (28%), Positives = 108/225 (48%), Gaps = 36/225 (16%) Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRH-----FHEKTGKALPLLY 223 MFL GL+ + T V LG+++ +F T F +K G + +Y Sbjct: 277 MFLRGAGLTLFIALIGT-----VVGTTLGLLIGVFRTIPDSENPVARFFQKLGNLILSIY 331 Query: 224 ISTFLIFGLPTLVL-------IALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 I F G P +V +AL + + D+ V +L+I +S Sbjct: 332 IEVFR--GTPMMVQAMVIFYGLALAFGISLDRTV----------------AALFI-VSVN 372 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 T A+++EIVR G+ AV +GQ EAA A+G+TH + R V++PQ +R+I+P ++++ +K Sbjct: 373 TGAYMSEIVRGGIFAVDKGQFEAAQAIGMTHGQTMRKVVIPQVLRNILPATGNEFVINIK 432 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 ++++ +G ADL G Q + I +YL ++ +I Sbjct: 433 DTAVLSVIGVADLFFQGNAASGANFQFFQTFTIVGIMYLVMTFVI 477 >gi|118476507|ref|YP_893658.1| amino acid ABC transporter permease [Bacillus thuringiensis str. Al Hakam] gi|225862824|ref|YP_002748202.1| amino acid ABC transporter, permease protein [Bacillus cereus 03BB102] gi|118415732|gb|ABK84151.1| amino acid ABC transporter membrane protein, PAAT family [Bacillus thuringiensis str. Al Hakam] gi|225788606|gb|ACO28823.1| amino acid ABC transporter, permease protein [Bacillus cereus 03BB102] Length = 234 Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 49/157 (31%), Positives = 92/157 (58%), Gaps = 14/157 (8%) Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244 T + + +F++GI+L+ T L+R + + + +Y+S +I G P LV + + + Sbjct: 35 TTIPLTLITFIIGIILATL-TALARISGSRILQWIARIYVS--IIRGTPLLVQL---FII 88 Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304 + P L V P + + I S A+ +EI+R+ ++++P+GQ EAA +G Sbjct: 89 FYGLPTLN-------VEVEP-YTAAVIGFSLNVGAYASEIIRASILSIPKGQWEAAYTIG 140 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341 +T+ +A + V+LPQA R IPPL++ +++L+K++SLA Sbjct: 141 MTYPQALKRVILPQATRVSIPPLSNTFISLVKDTSLA 177 Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust. Identities = 15/41 (36%), Positives = 26/41 (63%) Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 I+ TL R+S ++++ WI R+YV + R P LV +F ++ Sbjct: 49 ILATLTALARISGSRILQWIARIYVSIIRGTPLLVQLFIIF 89 >gi|22537749|ref|NP_688600.1| amino acid ABC transporter, permease protein [Streptococcus agalactiae 2603V/R] gi|76787814|ref|YP_330227.1| polar amino acid ABC transporter permease [Streptococcus agalactiae A909] gi|76798453|ref|ZP_00780691.1| amino acid ABC transporter, permease protein [Streptococcus agalactiae 18RS21] gi|22534640|gb|AAN00473.1|AE014265_2 amino acid ABC transporter, permease protein [Streptococcus agalactiae 2603V/R] gi|76562871|gb|ABA45455.1| polar amino acid uptake (PAAT) family ABC transporter, permease protein [Streptococcus agalactiae A909] gi|76586187|gb|EAO62707.1| amino acid ABC transporter, permease protein [Streptococcus agalactiae 18RS21] Length = 221 Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 65/200 (32%), Positives = 105/200 (52%), Gaps = 20/200 (10%) Query: 194 FVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG- 252 F+LG ++ F L + H + + L ++IS L+ G+P +VL+ L Y F P +G Sbjct: 35 FILGAIVGFFVA-LMKMSHFRLLRYLANIHIS--LMRGIPLMVLLFLIY---FGLPFIGI 88 Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312 Q + + S V MS +A+I+EI+R+ L+AV GQ EAA ALGL R Sbjct: 89 QLDAVTASIVGFTMMS---------SAYISEIIRAALLAVDHGQWEAARALGLKTPTIYR 139 Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS----VGGTIINQTGQAIEIIL 368 +++PQA R +P L++ L+++K+SSL + D+ + VGGT + I + L Sbjct: 140 GIIIPQATRIALPSLSNVLLDMVKSSSLTAMITVPDIFNNAKIVGGTYSDYMTAYILVAL 199 Query: 369 IWMFIYLSLSIMIALFMNRL 388 I+ I +I+ + RL Sbjct: 200 IYWVICTLYAIIQDWWEKRL 219 >gi|314940259|ref|ZP_07847432.1| ABC transporter, permease protein [Enterococcus faecium TX0133a04] gi|314941683|ref|ZP_07848562.1| ABC transporter, permease protein [Enterococcus faecium TX0133C] gi|314947673|ref|ZP_07851082.1| ABC transporter, permease protein [Enterococcus faecium TX0082] gi|314950660|ref|ZP_07853740.1| ABC transporter, permease protein [Enterococcus faecium TX0133A] gi|314992473|ref|ZP_07857894.1| ABC transporter, permease protein [Enterococcus faecium TX0133B] gi|314996867|ref|ZP_07861872.1| ABC transporter, permease protein [Enterococcus faecium TX0133a01] gi|313589010|gb|EFR67855.1| ABC transporter, permease protein [Enterococcus faecium TX0133a01] gi|313592933|gb|EFR71778.1| ABC transporter, permease protein [Enterococcus faecium TX0133B] gi|313597207|gb|EFR76052.1| ABC transporter, permease protein [Enterococcus faecium TX0133A] gi|313599455|gb|EFR78298.1| ABC transporter, permease protein [Enterococcus faecium TX0133C] gi|313640579|gb|EFS05159.1| ABC transporter, permease protein [Enterococcus faecium TX0133a04] gi|313645914|gb|EFS10494.1| ABC transporter, permease protein [Enterococcus faecium TX0082] Length = 237 Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 60/221 (27%), Positives = 110/221 (49%), Gaps = 41/221 (18%) Query: 185 TNAKIFVFSFV----LGIVLSLFATRLSRHFHEK---------TGKALPLLYISTFLIFG 231 T K+F+F+ + LGIVL+L LS HF + PLL F+ +G Sbjct: 41 TTLKLFLFTLIGSLPLGIVLAL---GLSLHFKPLRYLLQTYVWVMRGTPLLLQLIFIFYG 97 Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291 LPT+ ++ FD+ F + IA AA+ AEI R G+ + Sbjct: 98 LPTIGIV-------FDR-----------------FEAALIAFILNYAAYFAEIFRGGIQS 133 Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 +P+GQ EAA L L+ + +++PQ + ++P + ++ +NL+K+SSL +G D++ Sbjct: 134 IPQGQYEAAQVLQLSPFQTVTKIVIPQVTKIVLPSVGNEVINLVKDSSLIYILGLGDVMR 193 Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 G + + + ++ + + IYL+L+ ++ + M ++ K+ Sbjct: 194 AGKIAMERDATLLPLLGVAI-IYLTLTGILTIVMKQVEGKL 233 >gi|218458307|ref|ZP_03498398.1| general L-amino acid ABC transporter, permease protein [Rhizobium etli Kim 5] Length = 121 Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 42/93 (45%), Positives = 62/93 (66%) Query: 19 LYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVP 78 LYD R+ I QI+ +LL W +N N+ ++N++ G GFL+ RAGFE+ Q ++ Sbjct: 28 LYDPRIRGIFFQILTIVLLVAFVWWVAHNTAVNLARANIASGFGFLNGRAGFEVGQSLIA 87 Query: 79 YTSDSSYATAILVGFVNTFWLAFSGMIPATIIG 111 Y+SDS+Y A+LVG +NT +A +G+I ATIIG Sbjct: 88 YSSDSTYGRALLVGLLNTLLIAVTGIITATIIG 120 >gi|319892895|ref|YP_004149770.1| Glutamate ABC transporter, periplasmic glutamine- binding protein [Staphylococcus pseudintermedius HKU10-03] gi|317162591|gb|ADV06134.1| Glutamate ABC transporter, periplasmic glutamine- binding protein [Staphylococcus pseudintermedius HKU10-03] Length = 486 Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 33/85 (38%), Positives = 62/85 (72%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+ IAL +A+IAEI+R+G+ AV +GQMEAA +LGL++ + + V++PQA++ I+P Sbjct: 356 FICGAIALVINCSAYIAEIIRAGINAVDKGQMEAARSLGLSYSQTMKSVIMPQAIKKILP 415 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLV 350 L ++++ ++K SS+ +G ++++ Sbjct: 416 ALGNEFVTVIKESSIVSVIGVSEIM 440 >gi|315036620|gb|EFT48552.1| ABC transporter, permease protein [Enterococcus faecalis TX0027] Length = 546 Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 63/225 (28%), Positives = 108/225 (48%), Gaps = 36/225 (16%) Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRH-----FHEKTGKALPLLY 223 MFL GL+ + T V LG+++ +F T F +K G + +Y Sbjct: 316 MFLRGAGLTLFIALIGT-----VVGTTLGLLIGVFRTIPDSENPVARFFQKLGNLILSIY 370 Query: 224 ISTFLIFGLPTLVL-------IALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 I F G P +V +AL + + D+ V +L+I +S Sbjct: 371 IEVFR--GTPMMVQAMVIFYGLALAFGISLDRTV----------------AALFI-VSVN 411 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 T A+++EIVR G+ AV +GQ EAA A+G+TH + R V++PQ +R+I+P ++++ +K Sbjct: 412 TGAYMSEIVRGGIFAVDKGQFEAAQAIGMTHGQTMRKVVIPQVLRNILPATGNEFVINIK 471 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 ++++ +G ADL G Q + I +YL ++ +I Sbjct: 472 DTAVLSVIGVADLFFQGNAASGANFQFFQTFTIVGIMYLVMTFVI 516 >gi|301065633|ref|YP_003787656.1| amino acid ABC transporter permease [Lactobacillus casei str. Zhang] gi|300438040|gb|ADK17806.1| ABC-type amino acid transport system, permease component [Lactobacillus casei str. Zhang] Length = 237 Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 51/191 (26%), Positives = 96/191 (50%), Gaps = 33/191 (17%) Query: 188 KIFVFSFVLGIVLSLFA--TRLS-------------RHFHEKTGKALPLLYISTFLIFGL 232 I + SF +G++++L TR+S F+ ++ PLL + FGL Sbjct: 22 SIALVSFAIGLIIALITALTRISVRKGFWITFAKGFASFYVWLFRSTPLLVQLFIVFFGL 81 Query: 233 PTLVLIAL-KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291 P+L++ + + + D V G F S T A+ +E +R+ L++ Sbjct: 82 PSLIIPGIFPHGIKLDPVVAGIITF-----------------SLNTGAYCSETIRAALLS 124 Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 + GQ EAA ++GL R R +++PQA+R+ +PPL++ +++L+K++SLA ++ ++ Sbjct: 125 IDHGQWEAAYSVGLPRRLVLREIIIPQALRTAVPPLSNSFISLVKDTSLAASITIVEMFQ 184 Query: 352 VGGTIINQTGQ 362 V I + Q Sbjct: 185 VSQQIAAENYQ 195 >gi|238765551|ref|ZP_04626464.1| ABC-type amino acid transport system permease component [Yersinia kristensenii ATCC 33638] gi|238696229|gb|EEP89033.1| ABC-type amino acid transport system permease component [Yersinia kristensenii ATCC 33638] Length = 251 Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 56/218 (25%), Positives = 111/218 (50%), Gaps = 15/218 (6%) Query: 177 SFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF--GLPT 234 +FP + A + S + G+ ++ T L +G +L + FL F +P Sbjct: 17 TFPDGPLGGAALTLLISLLAGVASAILGTVLGVVLAMSSGVWAGIL--AAFLGFFRAIPV 74 Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294 ++LI + +F P++ + PE ++ AL+ +A++A V++G++A+ Sbjct: 75 IMLI---FWTYFLLPIVFGVDI-------PEITTVVCALALIASAYLAHAVKAGIMAIGA 124 Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354 GQ +A ++LG + V+LPQA+R ++P +Q+++L+K++SLA VG +L + Sbjct: 125 GQWQAGLSLGFNRWQVLWFVVLPQALRMMVPSFINQWISLIKDTSLAYIVGVNELTFLAT 184 Query: 355 TIINQTG-QAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 + N++ +E+ L +Y L + + L N LN + Sbjct: 185 QVNNRSMVYPMEVFLFVALVYFVLCLALDLLANGLNRR 222 >gi|254501118|ref|ZP_05113269.1| ABC transporter, permease protein [Labrenzia alexandrii DFL-11] gi|222437189|gb|EEE43868.1| ABC transporter, permease protein [Labrenzia alexandrii DFL-11] Length = 383 Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 33/87 (37%), Positives = 60/87 (68%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 + + + I ++ ++AA++AE+VR GL A+P+GQ E A+ALGL L++LPQA++ +I Sbjct: 245 KLLRVLIGVTLFSAAYMAEVVRGGLQAIPKGQYEGAMALGLRFWPMMYLIILPQALKLVI 304 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVS 351 P + + ++ L K+++L + VG DL+ Sbjct: 305 PGIVNTFIGLFKDTTLVLIVGMFDLLG 331 >gi|213650338|ref|ZP_03380391.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Salmonella enterica subsp. enterica serovar Typhi str. J185] Length = 184 Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 38/128 (29%), Positives = 75/128 (58%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I LS TAA+ +E +R+ + A+ +GQ EAA ++G+T + R +LPQA R +PPL++ Sbjct: 55 IGLSLNTAAYTSETLRAAISAIDKGQWEAAASIGMTPWQTLRRAILPQAARVALPPLSNS 114 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 +++L+K++SLA + +L I ++T + + L IY ++ +++ N Sbjct: 115 FISLVKDTSLAATIQVPELFRQAQLITSRTLEVFTMYLAASLIYWVMATVLSALQNYFEN 174 Query: 391 KIALKEKK 398 ++ +E++ Sbjct: 175 QLNRQERE 182 >gi|81429106|ref|YP_396106.1| putative glutamine/glutamate ABC transporter, membrane-spanning/substrate-binding subunit precursor [Lactobacillus sakei subsp. sakei 23K] gi|78610748|emb|CAI55799.1| Putative glutamine/glutamate ABC transporter, membrane-spanning/substrate-binding subunit precursor [Lactobacillus sakei subsp. sakei 23K] Length = 478 Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 68/233 (29%), Positives = 107/233 (45%), Gaps = 39/233 (16%) Query: 160 DHSIVLPFGMFLNNRGLSFPTLTMD---TNAKIFVFSFVLGI---VLSLFATRLSRHFHE 213 DHS FG+ N+G L T IF F+ + G+ +L + + +R + Sbjct: 262 DHSF---FGLLKENKGAILDGLGQTLLLTVIAIF-FATIFGVFFGLLGVLPNKFARAVSD 317 Query: 214 KT---GKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY 270 + LPLL ++ F+ G+P+L G + P ++ Sbjct: 318 TVIYIFRGLPLLVLALFIYTGIPSLT----------------------GQKI-PAMVAGV 354 Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I L A+ A V+ G+ AV GQMEAA +LGL + KA R V+LPQ +R ++P +Q Sbjct: 355 ITLMFNEGAYTAAFVKGGIGAVSAGQMEAARSLGLPYGKAMRRVILPQGIRIMVPSFINQ 414 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 ++ LK++S+ +G +L G II + +E IW I L I+I L Sbjct: 415 FIITLKDTSILSIIGIVELTQAGKIIIARN---LEGFKIWGMIALIYLIVITL 464 >gi|238783037|ref|ZP_04627064.1| ABC-type amino acid transport system permease component [Yersinia bercovieri ATCC 43970] gi|238716038|gb|EEQ08023.1| ABC-type amino acid transport system permease component [Yersinia bercovieri ATCC 43970] Length = 254 Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 39/129 (30%), Positives = 76/129 (58%), Gaps = 1/129 (0%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 PE ++ AL+ +A++A V++G++A+ GQ +A ++LG + V+LPQA+R + Sbjct: 94 PEITTVVCALALIASAYLAHAVKAGIVAIGAGQWQAGLSLGFNRWQVLGFVVLPQALRMM 153 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG-QAIEIILIWMFIYLSLSIMIA 382 +P +Q+++L+K++SLA VG +L + + N++ +E+ L +Y L + + Sbjct: 154 VPSFINQWISLIKDTSLAYIVGVNELTFLATQVNNRSMVYPMEVFLFVALVYFVLCLALD 213 Query: 383 LFMNRLNAK 391 L N LN + Sbjct: 214 LLANGLNRR 222 >gi|238782938|ref|ZP_04626966.1| Inner membrane amino-acid ABC transporter permease protein yhdY [Yersinia bercovieri ATCC 43970] gi|238716141|gb|EEQ08125.1| Inner membrane amino-acid ABC transporter permease protein yhdY [Yersinia bercovieri ATCC 43970] Length = 369 Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 35/76 (46%), Positives = 54/76 (71%) Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335 + +A++AE+VR GL A+P+GQ EAA +LGL + K LV+LPQA++ +IP L + + L Sbjct: 243 FQSAYVAEVVRGGLQALPKGQTEAAESLGLGYWKTQGLVILPQALKMVIPGLVNTIIALF 302 Query: 336 KNSSLAVAVGFADLVS 351 K++SL + +G DL S Sbjct: 303 KDTSLVIIIGLFDLFS 318 >gi|291482730|dbj|BAI83805.1| hypothetical protein BSNT_00597 [Bacillus subtilis subsp. natto BEST195] Length = 226 Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 56/173 (32%), Positives = 95/173 (54%), Gaps = 15/173 (8%) Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLG-QFNFIGGSTVSPEFMSLYIALSCYTAAF 280 LYIS + G+P LV++ + L+F P + QF+ + + I S +AA+ Sbjct: 65 LYIS--FMRGVPILVIL---FILYFGFPYISIQFSAVTAAL---------IGFSLNSAAY 110 Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340 IAEI RS + +V +GQ EAA +LGL++ + R ++LPQ++ +PPL + L+L+K SSL Sbjct: 111 IAEINRSAISSVEKGQWEAASSLGLSYWQTMRGIILPQSIHIALPPLANVLLDLIKASSL 170 Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393 A + +L+ I + + + ++ IY ++ + A+F N L K A Sbjct: 171 AAMITVPELLQHAKIIGGREFDYMTMYILTALIYWAICSIAAVFQNILEKKYA 223 Score = 41.2 bits (95), Expect = 0.32, Method: Compositional matrix adjust. Identities = 19/61 (31%), Positives = 33/61 (54%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 ++ G T ++F M T+IG + R+S L+ W ++Y+ R +P LV++F L Sbjct: 23 VIKGIGYTLLISFVSMFAGTVIGLFISLARMSKLALLRWPAKLYISFMRGVPILVILFIL 82 Query: 149 Y 149 Y Sbjct: 83 Y 83 >gi|257418660|ref|ZP_05595654.1| ABC amino acid transporter [Enterococcus faecalis T11] gi|257160488|gb|EEU90448.1| ABC amino acid transporter [Enterococcus faecalis T11] Length = 507 Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 63/225 (28%), Positives = 108/225 (48%), Gaps = 36/225 (16%) Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRH-----FHEKTGKALPLLY 223 MFL GL+ + T V LG+++ +F T F +K G + +Y Sbjct: 277 MFLRGAGLTLFIALIGT-----VVGTTLGLLIGVFRTIPDSENPVARFFQKLGNLILSIY 331 Query: 224 ISTFLIFGLPTLVL-------IALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 I F G P +V +AL + + D+ V +L+I +S Sbjct: 332 IEVFR--GTPMMVQAMVIFYGLALAFGISLDRTV----------------AALFI-VSVN 372 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 T A+++EIVR G+ AV +GQ EAA A+G+TH + R V++PQ +R+I+P ++++ +K Sbjct: 373 TGAYMSEIVRGGIFAVDKGQFEAAQAIGMTHGQTMRKVVIPQVLRNILPATGNEFVINIK 432 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 ++++ +G ADL G Q + I +YL ++ +I Sbjct: 433 DTAVLSVIGVADLFFQGNAASGANFQFFQTFTIVGIMYLVMTFVI 477 >gi|227555893|ref|ZP_03985940.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus faecalis HH22] gi|312901081|ref|ZP_07760370.1| ABC transporter, permease protein [Enterococcus faecalis TX0470] gi|227175060|gb|EEI56032.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus faecalis HH22] gi|311291827|gb|EFQ70383.1| ABC transporter, permease protein [Enterococcus faecalis TX0470] gi|315168140|gb|EFU12157.1| ABC transporter, permease protein [Enterococcus faecalis TX1341] gi|315573554|gb|EFU85745.1| ABC transporter, permease protein [Enterococcus faecalis TX0309B] gi|315582098|gb|EFU94289.1| ABC transporter, permease protein [Enterococcus faecalis TX0309A] Length = 546 Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 63/225 (28%), Positives = 108/225 (48%), Gaps = 36/225 (16%) Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRH-----FHEKTGKALPLLY 223 MFL GL+ + T V LG+++ +F T F +K G + +Y Sbjct: 316 MFLRGAGLTLFIALIGT-----VVGTTLGLLIGVFRTIPDSENPVARFFQKLGNLILSIY 370 Query: 224 ISTFLIFGLPTLVL-------IALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 I F G P +V +AL + + D+ V +L+I +S Sbjct: 371 IEVFR--GTPMMVQAMVIFYGLALAFGISLDRTV----------------AALFI-VSVN 411 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 T A+++EIVR G+ AV +GQ EAA A+G+TH + R V++PQ +R+I+P ++++ +K Sbjct: 412 TGAYMSEIVRGGIFAVDKGQFEAAQAIGMTHGQTMRKVVIPQVLRNILPATGNEFVINIK 471 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 ++++ +G ADL G Q + I +YL ++ +I Sbjct: 472 DTAVLSVIGVADLFFQGNAASGANFQFFQTFTIVGIMYLVMTFVI 516 >gi|171778288|ref|ZP_02919494.1| hypothetical protein STRINF_00336 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] gi|171282988|gb|EDT48412.1| hypothetical protein STRINF_00336 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] Length = 230 Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 44/127 (34%), Positives = 77/127 (60%), Gaps = 6/127 (4%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +A++ AA I+E+ +S +A+P+GQ+EA +++GL+ + +LLPQA R +P +TS Sbjct: 102 LAMTLLFAASISEVFKSSYLALPKGQLEAGLSIGLSEPQTFVRILLPQAFRIALPNITSA 161 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTII--NQTGQAIE----IILIWMFIYLSLSIMIALF 384 +NLLK+ +LA +G DL+ G II N ++E + +I+ + L LS++ + Sbjct: 162 VINLLKDIALAYTIGLVDLMGEGNLIISRNMGNYSLETYTAVAVIYWILALILSVVTHIV 221 Query: 385 MNRLNAK 391 N+L K Sbjct: 222 ENQLETK 228 >gi|152968094|ref|YP_001363878.1| polar amino acid ABC transporter, inner membrane subunit [Kineococcus radiotolerans SRS30216] gi|151362611|gb|ABS05614.1| polar amino acid ABC transporter, inner membrane subunit [Kineococcus radiotolerans SRS30216] Length = 222 Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 62/206 (30%), Positives = 106/206 (51%), Gaps = 20/206 (9%) Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252 SF +G+V++L L R + + Y+S +I G P LV + L Y L Sbjct: 31 SFAIGMVIALVVA-LMRLSSVLVLQGIARFYVS--VIRGTPLLVQLFLIYY------ALP 81 Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312 +F G+T P F S +A S + +E+VR+ +++VPRGQ EAA+ +G+ + R Sbjct: 82 EF----GATWDP-FPSAVVAFSLNVGGYASEVVRAAILSVPRGQTEAALTIGMNYPTTMR 136 Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ-----AIEII 367 ++LPQA R +PPL++ ++L+K++SLA ++ +L+ I T + ++ + Sbjct: 137 RIVLPQAARVAVPPLSNTLISLVKDTSLASSIQVVELLRKASEIAAPTYEFFALYSLAAV 196 Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIA 393 W+ + L LS RLN +A Sbjct: 197 YYWI-VCLVLSFGQTRVETRLNRHVA 221 >gi|322372532|ref|ZP_08047068.1| polar amino acid uptake (PAAT) family ABC transporter, permease protein [Streptococcus sp. C150] gi|321277574|gb|EFX54643.1| polar amino acid uptake (PAAT) family ABC transporter, permease protein [Streptococcus sp. C150] Length = 226 Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 53/161 (32%), Positives = 92/161 (57%), Gaps = 15/161 (9%) Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL-HFDKPV 250 F +LG+++SL + K + L LY+ F G P +V I + + L H + P Sbjct: 30 FGTILGVLVSLI-----KRSGIKPLEWLVSLYVWVFR--GTPMVVQIMIAFNLIHMNLPT 82 Query: 251 LGQFNFIGG--STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308 + QF + S + P I LS + A+I+E VR+G+ ++P+GQ+EAA +LG+ Sbjct: 83 V-QFGILNLDLSRIVPGI----IVLSLNSGAYISESVRAGIESIPKGQVEAAYSLGIRPW 137 Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349 R V+LPQA+++I+P L ++++ ++K+SSL +G +L Sbjct: 138 NTMRYVVLPQAIKNILPALGNEFVTIIKDSSLLQTIGVMEL 178 >gi|317407116|gb|EFV87120.1| ABC transporter [Achromobacter xylosoxidans C54] Length = 217 Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 36/134 (26%), Positives = 78/134 (58%), Gaps = 1/134 (0%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P+F + +A + AA+ AEI R+G+ +V RGQ E + LG+T+ + R ++LPQ ++ + Sbjct: 85 PDFPAAVVAFALNYAAYFAEIFRAGIQSVDRGQYEGSKVLGMTYLQTLRRIVLPQMVQRV 144 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 +PP++++ + L+K++SL + D++ I+ + ++ F YL +++++ Sbjct: 145 LPPMSNETITLVKDTSLIYVLALNDILRTARGIVQRDFTTTPFLVAAAF-YLIMTLVLTW 203 Query: 384 FMNRLNAKIALKEK 397 F R+ + A ++ Sbjct: 204 FFQRMEKRYAKYDQ 217 >gi|158425495|ref|YP_001526787.1| putative ABC amino acid transporter permease/substrate-binding protein [Azorhizobium caulinodans ORS 571] gi|158332384|dbj|BAF89869.1| putative ABC amino acid transporter permease/substrate-binding protein [Azorhizobium caulinodans ORS 571] Length = 227 Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 55/177 (31%), Positives = 97/177 (54%), Gaps = 6/177 (3%) Query: 222 LYISTFLIFGLPTLVLIALKY-QLHFDKPVLGQ--FNFIGGSTVS---PEFMSLYIALSC 275 L+ + F +F +P L + Y +L + P+L Q F F G + +F S + LS Sbjct: 45 LFGAAFRLFSVPILSQLTFGYVELVRNTPILVQLFFIFYGLPAIGLGISQFWSGVLCLSL 104 Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335 + A+ E +R GL+ + +G EAA +L L+ R+ RLV LP A+R+ +P + + ++LL Sbjct: 105 WAGAYQVENIRGGLLTIEKGLKEAAFSLSLSLRQYFRLVALPLAIRTSLPSMLNTSISLL 164 Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 KNSS A+G A++ + I +A+E+ +YL+L I+++L + + K+ Sbjct: 165 KNSSYLQAIGLAEMTFIAVDRIATDFRAVEMFTAIGALYLALVIVLSLMTSIVEHKL 221 >gi|16262717|ref|NP_435510.1| ABC transporter, permease [Sinorhizobium meliloti 1021] gi|14523343|gb|AAK64922.1| ABC transporter, permease [Sinorhizobium meliloti 1021] Length = 228 Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 45/140 (32%), Positives = 78/140 (55%), Gaps = 1/140 (0%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G +SP S++IAL ++AEIVR G+ A R Q+EAA +LGL++ + R V+LP Sbjct: 84 GIRLSP-LTSVFIALVLNNGGYVAEIVRGGIEATHRSQVEAAESLGLSYFQTLRYVILPP 142 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378 A+ + P+ SQ + L+ ++SL A+G DL ++T + +EI L+ +Y+ L+ Sbjct: 143 ALEKVFTPVVSQCVLLMLSTSLVSAIGVEDLTGAAMIASSETFRTMEIYLVVAMVYVVLN 202 Query: 379 IMIALFMNRLNAKIALKEKK 398 + +N I + ++ Sbjct: 203 FVFRAVLNVAGLMIFTRSRR 222 >gi|13475816|ref|NP_107386.1| ABC transporter, permease protein [Mesorhizobium loti MAFF303099] gi|14026575|dbj|BAB53172.1| ABC transporter, permease protein [Mesorhizobium loti MAFF303099] Length = 230 Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 43/122 (35%), Positives = 75/122 (61%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +ALS AA+ +EI+R + AVPRG EAA A G++ RL++LP A+R+ IP T++ Sbjct: 102 VALSLNEAAYGSEILRGAIKAVPRGLTEAATASGMSKLLTLRLIVLPLALRNAIPNYTNE 161 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 + ++K +SLA + ++ + +I+QT +A+E+ + IYL+L+ I +N L Sbjct: 162 IILMVKGTSLASIITLMEITGIAQGLISQTYRAVEVFVAAGAIYLTLNFAIISALNALET 221 Query: 391 KI 392 ++ Sbjct: 222 RL 223 >gi|323490322|ref|ZP_08095537.1| polar amino acid ABC transporter, inner membrane subunit [Planococcus donghaensis MPA1U2] gi|323395992|gb|EGA88823.1| polar amino acid ABC transporter, inner membrane subunit [Planococcus donghaensis MPA1U2] Length = 222 Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 41/127 (32%), Positives = 72/127 (56%), Gaps = 4/127 (3%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IAL + A+IAEI R + V GQ EA+++LG+ ++ + ++ PQA+R IPPL +Q Sbjct: 96 IALGIHNGAYIAEIFRGAIQGVDPGQREASMSLGMNRKQTMQRIVFPQALRRSIPPLGNQ 155 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL----SIMIALFMN 386 ++ LK+SSL +G +++ ++ Q+ Q E L+ YL L + ++ + N Sbjct: 156 FIITLKDSSLVYIIGVSEIFALANREAAQSFQPFESFLVVALYYLVLVMIFTYLLRWYEN 215 Query: 387 RLNAKIA 393 +L+ A Sbjct: 216 KLDVDKA 222 >gi|313632859|gb|EFR99809.1| amino acid ABC transporter, permease protein [Listeria seeligeri FSL N1-067] Length = 213 Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 39/124 (31%), Positives = 74/124 (59%), Gaps = 1/124 (0%) Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327 +++IA AA+ AEI R G +++ GQ E+A LGLT+ + R ++LPQ ++ ++P + Sbjct: 86 AVFIAFILNYAAYFAEIFRGGFLSIENGQYESAKVLGLTYGQTLRKIVLPQVVKRVLPAI 145 Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387 ++ +NL+K+SSL +G DL+ G +++ I ++L+ IYL+L+ + + Sbjct: 146 GNEVINLVKDSSLVYILGIGDLLRAGKIAMSRDVTLIPLVLVAA-IYLALTAXXXVLFKQ 204 Query: 388 LNAK 391 L + Sbjct: 205 LEKR 208 >gi|311103246|ref|YP_003976099.1| glutamine transport ATP-binding protein GlnQ 1 [Achromobacter xylosoxidans A8] gi|310757935|gb|ADP13384.1| glutamine transport ATP-binding protein GlnQ 1 [Achromobacter xylosoxidans A8] Length = 502 Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 45/129 (34%), Positives = 72/129 (55%), Gaps = 7/129 (5%) Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291 LP LVL+ Y L Q G+ +S F + AL AFIAEI R G++ Sbjct: 67 LPLLVLLVFIYNLP-------QVFPAAGALLSDPFYAGLTALVVSETAFIAEIHRGGILG 119 Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 VPRGQ+EA ALG+ + R++++PQA+R +P L+++++ + K +SL + A+++ Sbjct: 120 VPRGQIEAGRALGIRYAGIQRMIVIPQALRIALPALSNEFITIAKLTSLVSVISLAEILL 179 Query: 352 VGGTIINQT 360 VG + Q Sbjct: 180 VGQRLYTQN 188 >gi|307131970|ref|YP_003883986.1| Octopine transport system permease occM [Dickeya dadantii 3937] gi|306529499|gb|ADM99429.1| Octopine transport system permease protein occM [Dickeya dadantii 3937] Length = 238 Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 44/135 (32%), Positives = 76/135 (56%), Gaps = 4/135 (2%) Query: 251 LGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306 LGQF+ + S P F +AL+ TA + AEI+R L+++P GQ+EA +A G++ Sbjct: 77 LGQFSVVRDSLFWPVLRDPFSCAVVALALCTAGYTAEILRGALLSIPAGQIEAGLACGMS 136 Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 R ++ P A+R +P +++ + L+K+++LA V D+ V II +T + +E+ Sbjct: 137 RWLLLRRIIAPVALRHALPAWSTEAILLIKSTALASLVTVWDVTGVAQQIIQRTYRTLEV 196 Query: 367 ILIWMFIYLSLSIMI 381 IYL L+ +I Sbjct: 197 FACAALIYLLLNFII 211 >gi|302561351|ref|ZP_07313693.1| ABC transporter permease [Streptomyces griseoflavus Tu4000] gi|302478969|gb|EFL42062.1| ABC transporter permease [Streptomyces griseoflavus Tu4000] Length = 278 Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 42/116 (36%), Positives = 72/116 (62%), Gaps = 5/116 (4%) Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339 ++AE +R+G+ AVP+GQMEAA +LG + +A +++PQA R I+PPLT++ + L K+SS Sbjct: 158 YMAETIRAGIQAVPKGQMEAARSLGFSPARAMVSIIIPQAFRIILPPLTNELVLLFKDSS 217 Query: 340 LAVAVGFA----DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 L + +G +L G + +QT + IL+ YL +++ + + R+ AK Sbjct: 218 LVLFLGVTLEERELSKYGRDLASQTANSTP-ILVAGLCYLLITVPLGFVVRRMEAK 272 >gi|329297091|ref|ZP_08254427.1| Glutamine ABC transporter, permease subunit [Plautia stali symbiont] Length = 269 Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 42/131 (32%), Positives = 79/131 (60%), Gaps = 5/131 (3%) Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 ALS +A++ EI RSG+ +V +GQMEA ALG+++ +A RLV++PQ +R ++P + +Q+ Sbjct: 108 ALSLIASAYMGEIFRSGIQSVEQGQMEACRALGMSYGRAMRLVIIPQGIRRVLPAIVNQF 167 Query: 332 LNLLKNSS----LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387 + ++K+SS L + G +L VG +G ++L +F YL +++ + +N Sbjct: 168 IAIIKDSSLVYLLGLMTGQRELFRVGQDADVLSGNLSPLMLAGLF-YLVITVPLTHAVNY 226 Query: 388 LNAKIALKEKK 398 +N + ++ Sbjct: 227 INVRYRTGRRR 237 >gi|307133278|ref|YP_003885294.1| ABC transporter permease [Dickeya dadantii 3937] gi|306530807|gb|ADN00738.1| ABC transport system, permease component [Dickeya dadantii 3937] Length = 252 Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 50/184 (27%), Positives = 95/184 (51%), Gaps = 10/184 (5%) Query: 177 SFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV 236 +FP + A S + GI ++ T L G A LL + +P ++ Sbjct: 17 TFPDGPLGGAALTLALSLMAGIASAVLGTGLGVALAMYRGWAGGLLAMVLGFFRAIPVIM 76 Query: 237 LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296 LI + +F P+L + PE ++ AL+ +A++A V++G++A+ RGQ Sbjct: 77 LI---FWTYFLLPMLFGVDI-------PEITTVVCALAFIASAYLAHGVKAGIVAIGRGQ 126 Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356 +A ++LGL + ++LPQA+R ++P +Q+++L+K++SLA VG +L + + Sbjct: 127 WQAGMSLGLGRWQTLWYIVLPQALRMMVPSFINQWISLIKDTSLAYIVGVGELTFLATQV 186 Query: 357 INQT 360 N++ Sbjct: 187 NNRS 190 >gi|194016790|ref|ZP_03055403.1| ABC superfamily ATP binding cassette transporter, membrane protein [Bacillus pumilus ATCC 7061] gi|194011396|gb|EDW20965.1| ABC superfamily ATP binding cassette transporter, membrane protein [Bacillus pumilus ATCC 7061] Length = 218 Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 47/164 (28%), Positives = 85/164 (51%), Gaps = 29/164 (17%) Query: 193 SFVLGIVLSLFATRLSR------HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246 F+LGI+L+L + + F+ + PL+ + FGLP L L +Q+ Sbjct: 32 GFILGILLTLCKISVFKPLIWLADFYTSIFRGTPLVLQLLIIYFGLPQL----LGFQID- 86 Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306 ++ + A S +AA+++EI+R+G+ A+ +GQ EAA+ALG+ Sbjct: 87 ------------------QYWAAVAAFSLNSAAYVSEIIRAGINAIDKGQKEAAVALGIP 128 Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 + K + +LLPQA ++I P L ++ + L K S++ +G D++ Sbjct: 129 YAKMMKDLLLPQAFKNISPALVNETITLTKESAIVTVIGLGDVM 172 >gi|170754694|ref|YP_001780100.1| His/Glu/Gln/Arg/opine ABC transporter permease [Clostridium botulinum B1 str. Okra] gi|169119906|gb|ACA43742.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Clostridium botulinum B1 str. Okra] Length = 211 Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 37/116 (31%), Positives = 69/116 (59%), Gaps = 1/116 (0%) Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 A++AE R+G+ ++ +GQ+EAA LG T+ + +++PQA+R++IPP+ ++ +NL+K+ Sbjct: 96 GAYLAETFRAGIESIDKGQVEAAKVLGFTYNQTMFKIIVPQAIRNVIPPICNESINLIKD 155 Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393 S+L A+G D++ ++ + I I IYL ++ + L L K A Sbjct: 156 SALVAAIGIGDMLRAAKEVVTR-DFTITPFFIAAAIYLLITAFLVLMFRTLEKKYA 210 >gi|126435628|ref|YP_001071319.1| polar amino acid ABC transporter, inner membrane subunit [Mycobacterium sp. JLS] gi|126235428|gb|ABN98828.1| amino acid ABC transporter membrane protein, PAAT family [Mycobacterium sp. JLS] Length = 307 Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 43/117 (36%), Positives = 71/117 (60%), Gaps = 3/117 (2%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I L AA++AEI+R+G+ +VP GQ EA+ ALG++ R +LPQAMR IIPP ++ Sbjct: 159 IGLGLNEAAYMAEIIRAGISSVPEGQSEASTALGMSWTMTMRRTVLPQAMRVIIPPTGNE 218 Query: 331 YLNLLKNSSLAVAVGFA-DLVSVGGTIINQTGQAIEIILIWMFIYLSLS--IMIALF 384 +++LK +SL AV ++ +L I Q I ++++ YL+++ +M+ F Sbjct: 219 IISMLKTTSLVTAVPYSMELYGRARDIAGVIFQPIPLLMVAATWYLAITSVLMVGQF 275 >gi|209546329|ref|YP_002278219.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209539186|gb|ACI59119.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 222 Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 43/115 (37%), Positives = 70/115 (60%), Gaps = 1/115 (0%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IAL A+ EI+R G+ ++P+GQMEA +ALGL + RL++L A+R+I P LTSQ Sbjct: 95 IALGINGGAYAIEIIRGGVQSIPKGQMEAGLALGLHKAQVFRLIILKPALRAIYPSLTSQ 154 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS-IMIALF 384 ++ L +S+A A+ +L SV I +++ ++ E+ Y +S +M+ LF Sbjct: 155 FVLLTLTTSIASAISAYELTSVSQRIESESFRSFEVYFTVTLFYFVISWVMMRLF 209 Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust. Identities = 28/62 (45%), Positives = 39/62 (62%) Query: 88 AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147 ++L+G + TF LA GM+ A +IG A R SA K + W+ +VE+ RN P LV IFF Sbjct: 16 SLLLGCLGTFLLAICGMLLAIVIGIGGVALRDSALKPLRWLVIAFVELIRNTPFLVQIFF 75 Query: 148 LY 149 +Y Sbjct: 76 IY 77 >gi|196046952|ref|ZP_03114172.1| amino acid ABC transporter, permease protein [Bacillus cereus 03BB108] gi|229154561|ref|ZP_04282678.1| Amino acid ABC transporter [Bacillus cereus ATCC 4342] gi|229183181|ref|ZP_04310411.1| Amino acid ABC transporter [Bacillus cereus BGSC 6E1] gi|196022181|gb|EDX60868.1| amino acid ABC transporter, permease protein [Bacillus cereus 03BB108] gi|228600320|gb|EEK57910.1| Amino acid ABC transporter [Bacillus cereus BGSC 6E1] gi|228628959|gb|EEK85669.1| Amino acid ABC transporter [Bacillus cereus ATCC 4342] Length = 209 Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 49/157 (31%), Positives = 92/157 (58%), Gaps = 14/157 (8%) Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244 T + + +F++GI+L+ T L+R + + + +Y+S +I G P LV + + + Sbjct: 10 TTIPLTLITFIIGIILATL-TALARISGSRILQWIARIYVS--IIRGTPLLVQL---FII 63 Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304 + P L V P + + I S A+ +EI+R+ ++++P+GQ EAA +G Sbjct: 64 FYGLPTLN-------VEVEP-YTAAVIGFSLNVGAYASEIIRASILSIPKGQWEAAYTIG 115 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341 +T+ +A + V+LPQA R IPPL++ +++L+K++SLA Sbjct: 116 MTYPQALKRVILPQATRVSIPPLSNTFISLVKDTSLA 152 Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust. Identities = 15/41 (36%), Positives = 26/41 (63%) Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 I+ TL R+S ++++ WI R+YV + R P LV +F ++ Sbjct: 24 ILATLTALARISGSRILQWIARIYVSIIRGTPLLVQLFIIF 64 >gi|51892199|ref|YP_074890.1| glutamine ABC transporter permease protein [Symbiobacterium thermophilum IAM 14863] gi|51855888|dbj|BAD40046.1| glutamine ABC transporter permease protein [Symbiobacterium thermophilum IAM 14863] Length = 218 Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 37/122 (30%), Positives = 73/122 (59%) Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333 S + A+IAEI+R+ + ++ RGQMEAA +LG+++ A R ++LPQ R ++PP+ ++ Sbjct: 96 SLNSGAYIAEIIRAAIQSIDRGQMEAARSLGMSYGLAMRRIILPQTYRRLLPPMVNELSA 155 Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393 L K++SLA + +L+ +++T A + + YL +++ ++ +RL K+ Sbjct: 156 LTKDTSLASTISILELMKYSSQFVSRTNLAWQTYVWTAAFYLVVTMTLSALASRLEKKLE 215 Query: 394 LK 395 + Sbjct: 216 AR 217 >gi|154149257|ref|YP_001406028.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Campylobacter hominis ATCC BAA-381] gi|153805266|gb|ABS52273.1| amino acid ABC tansporter, permease protein, His/Glu/Gln/Arg/opine family [Campylobacter hominis ATCC BAA-381] Length = 235 Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 32/78 (41%), Positives = 56/78 (71%) Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 AL ++A++AEIVRSG+ ++ +GQMEAA A+GL + + R ++ PQA+++I+P L +++ Sbjct: 112 ALGLNSSAYVAEIVRSGINSIDKGQMEAARAMGLNYTTSMRKIVFPQAIKNILPALANEF 171 Query: 332 LNLLKNSSLAVAVGFADL 349 ++L K +S+ V DL Sbjct: 172 ISLFKETSVVGMVAITDL 189 >gi|16125689|ref|NP_420253.1| cystine ABC transporter permease [Caulobacter crescentus CB15] gi|221234444|ref|YP_002516880.1| cystine transport system permease protein [Caulobacter crescentus NA1000] gi|13422805|gb|AAK23421.1| cystine ABC tranporter, permease protein, putative [Caulobacter crescentus CB15] gi|220963616|gb|ACL94972.1| cystine transport system permease protein [Caulobacter crescentus NA1000] Length = 219 Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 66/201 (32%), Positives = 100/201 (49%), Gaps = 22/201 (10%) Query: 195 VLGIVLSLFATRLSRH--FHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252 VLG +L+L RLSR G +Y+S F G P LV + L Y + P Sbjct: 35 VLGFLLALM--RLSRSALLRWPAG-----VYVSAF--RGTPLLVQLFLIY---YGLP--- 79 Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312 QF P ++ I S AA+ EI+RS + AV +GQ EAA LG++ + R Sbjct: 80 QFGL-----EMPPLVAAGIGFSLNVAAYSCEILRSAIAAVDKGQWEAASVLGMSRGQTLR 134 Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372 V+LPQA R+ + PL++ +++L+K++SLA + +L I +T + + L Sbjct: 135 RVILPQAARTAVAPLSNSFISLVKDTSLAATIQVPELFRQAQLITARTYEIFTLYLAAAA 194 Query: 373 IYLSLSIMIALFMNRLNAKIA 393 IY LS ++A RL + A Sbjct: 195 IYWILSTILAAAQTRLERRAA 215 Score = 37.4 bits (85), Expect = 4.7, Method: Compositional matrix adjust. Identities = 23/61 (37%), Positives = 32/61 (52%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G T L+ GM ++G L+ RLS + L+ W VYV FR P LV +F + Sbjct: 15 LLKGAGYTIVLSVIGMSIGVVLGFLLALMRLSRSALLRWPAGVYVSAFRGTPLLVQLFLI 74 Query: 149 Y 149 Y Sbjct: 75 Y 75 >gi|56962686|ref|YP_174412.1| amino acid ABC transporter permease [Bacillus clausii KSM-K16] gi|56908924|dbj|BAD63451.1| amino acid ABC transporter permease [Bacillus clausii KSM-K16] Length = 226 Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 63/213 (29%), Positives = 106/213 (49%), Gaps = 5/213 (2%) Query: 182 TMDTNAKIFVFSFVL-GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240 T D I +F +L I +++ AT ++ G L LL ++F P + +A Sbjct: 4 TWDWEFAIAIFPEILSAITVTIAATIIAYCISLTAGLVLTLLRRASFK----PLALTVAG 59 Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300 + P L Q F+ +T F + I L + A +++EI RSG+ AVP+ Q EA+ Sbjct: 60 MIEFIRATPPLVQLFFVYYTTPLTGFQTGAIVLGLHYATYVSEIYRSGIEAVPKSQWEAS 119 Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 AL T + R ++LPQA+ +IP L + + L K + L A+ ++++V +I Sbjct: 120 QALNFTRAQTWRRIILPQAIPPVIPMLGNYLIVLFKETPLLSAIFVVEMMAVAQSIGTSD 179 Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393 + +E I I F++L LS A+F+ L K+ Sbjct: 180 WRYVEPITIVGFLFLVLSYPSAVFIRYLERKVG 212 >gi|320531680|ref|ZP_08032620.1| ABC transporter, permease protein [Actinomyces sp. oral taxon 171 str. F0337] gi|320136100|gb|EFW28108.1| ABC transporter, permease protein [Actinomyces sp. oral taxon 171 str. F0337] Length = 291 Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 41/100 (41%), Positives = 65/100 (65%), Gaps = 1/100 (1%) Query: 260 STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319 +TVS +F L + + T+A AE+ RSG+ A+ RGQ EAA ALG++ RL+L PQA Sbjct: 153 ATVS-DFWKLALPIVMCTSATTAEVFRSGVRALDRGQTEAAWALGMSSSLTMRLILAPQA 211 Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359 +R ++P L +Q + ++K ++LA + + +L+ G TII Q Sbjct: 212 LRLMLPTLVTQLVTIVKGTTLAYVLAYPELMYRGSTIIGQ 251 >gi|315641051|ref|ZP_07896134.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus italicus DSM 15952] gi|315483220|gb|EFU73733.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus italicus DSM 15952] Length = 488 Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 40/123 (32%), Positives = 81/123 (65%), Gaps = 4/123 (3%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IAL+ +AA++AEI+R+G+ AV +GQMEAA +LG+ R+A + ++ PQA+++I+P L ++ Sbjct: 363 IALALNSAAYVAEIIRAGISAVNKGQMEAARSLGMNQRQAMQFIIFPQAIKNILPALGNE 422 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA----IEIILIWMFIYLSLSIMIALFMN 386 ++ ++K SS+ +G ++L+ G + + + + + LI+ + S+S ++ + Sbjct: 423 FVTVIKESSVVSVIGVSELIFQAGNVQGASFKPFLPYVIVSLIYFVLTFSMSRLLGVAER 482 Query: 387 RLN 389 R+N Sbjct: 483 RMN 485 >gi|222087756|ref|YP_002546293.1| amino acid ABC transporter [Agrobacterium radiobacter K84] gi|221725204|gb|ACM28360.1| amino acid ABC transporter [Agrobacterium radiobacter K84] Length = 226 Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 53/189 (28%), Positives = 98/189 (51%), Gaps = 13/189 (6%) Query: 205 TRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP 264 T ++R F K A+ Y+ ++I G P LV + + + + P +G + Sbjct: 41 TAVTRLFGPKPLVAVARFYV--WVIRGTPLLVQL---FVIFYGLPSMG--------ILLD 87 Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 F + I + A+ +EI+R+ + +VP+GQ EAA ++G+ R+A +LPQA R + Sbjct: 88 AFPAAVIGFTLNVGAYSSEIIRAVISSVPKGQWEAAYSIGMNWRQAMSRTILPQAARVAV 147 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 PPL++ +++L+K++SLA A+ +L I+ T + + + + IYL LS ++ Sbjct: 148 PPLSNTFISLVKDTSLAAAITVPELFQAAQRIVATTYEPLILYIEAAIIYLVLSTFLSTL 207 Query: 385 MNRLNAKIA 393 L + A Sbjct: 208 QGYLERRFA 216 >gi|283458861|ref|YP_003363507.1| amino acid ABC transporter permease [Rothia mucilaginosa DY-18] gi|283134922|dbj|BAI65687.1| ABC-type amino acid transport system, permease component [Rothia mucilaginosa DY-18] Length = 224 Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 38/108 (35%), Positives = 65/108 (60%), Gaps = 4/108 (3%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I +S +T A++AE RS + A+PRGQ EAA L T + R V++PQA+R +P L + Sbjct: 94 ITMSLHTGAYVAETFRSAVAAIPRGQFEAAATLNFTRMQTLRHVVIPQAVRIALPNLGNN 153 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI----EIILIWMFIY 374 +++L+K +SL + DL G I ++T + + E+ +I++ I+ Sbjct: 154 FIDLIKGTSLVSVISMVDLFQTGKQIASRTFEPLAMYSEVAIIYLVIF 201 >gi|302549236|ref|ZP_07301578.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Streptomyces viridochromogenes DSM 40736] gi|302466854|gb|EFL29947.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Streptomyces viridochromogenes DSM 40736] Length = 339 Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 41/128 (32%), Positives = 77/128 (60%), Gaps = 3/128 (2%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I L+ + AA+ AE+VR G+++V GQ EAA ALG+ + R +++PQAMRSI+P + Sbjct: 185 IGLTLHEAAYAAEVVRGGILSVDSGQTEAAQALGIGRARTLRRIVVPQAMRSIVPTAGNM 244 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL---FMNR 387 + LK +S+ + DL+ + NQT Q I ++++ Y++++ ++++ ++ R Sbjct: 245 LIGTLKGTSIVSVLAVHDLLYSVQLVYNQTYQVIPLLVVATLWYIAVTTVLSVGQFYVER 304 Query: 388 LNAKIALK 395 A+ A + Sbjct: 305 HYARGAAR 312 >gi|324989769|gb|EGC21712.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK353] gi|324992503|gb|EGC24424.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK405] gi|324995967|gb|EGC27878.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK678] gi|325697413|gb|EGD39299.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK160] gi|327460727|gb|EGF07062.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK1] gi|327488811|gb|EGF20610.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK1058] Length = 230 Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 40/122 (32%), Positives = 73/122 (59%), Gaps = 2/122 (1%) Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 AA IAE+ ++ +AVP+GQ EA +++GLT + ++LPQA R +P LT+ LNL+++ Sbjct: 109 AAMIAEVFKAAYLAVPKGQTEAGLSIGLTPLQTFLRIVLPQAFRIALPNLTTALLNLMRD 168 Query: 338 SSLAVAVGFADLVSVGGTII--NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395 ++LA +G D++ G +I N ++E IY ++++++L L + +K Sbjct: 169 AALAYTIGAVDVMGAGQNLISRNLGNYSLETYTAVALIYWGIALVVSLASQLLEKSLTVK 228 Query: 396 EK 397 E+ Sbjct: 229 ER 230 >gi|152965191|ref|YP_001360975.1| ABC transporter inner membrane protein [Kineococcus radiotolerans SRS30216] gi|151359708|gb|ABS02711.1| binding-protein-dependent transport systems inner membrane component [Kineococcus radiotolerans SRS30216] Length = 332 Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 36/67 (53%), Positives = 52/67 (77%) Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 AA++AEI R+GL++V RGQ EAA ALG++ A R V+LPQAMR I+PP ++ + +LK+ Sbjct: 192 AAYMAEIARAGLLSVDRGQHEAAEALGMSKGLAMRRVVLPQAMRVIVPPTGNEVIAMLKD 251 Query: 338 SSLAVAV 344 +SL VA+ Sbjct: 252 TSLLVAI 258 >gi|148926601|ref|ZP_01810283.1| putative ABC-type amino-acid transporter permease protein [Campylobacter jejuni subsp. jejuni CG8486] gi|145845295|gb|EDK22389.1| putative ABC-type amino-acid transporter permease protein [Campylobacter jejuni subsp. jejuni CG8486] Length = 198 Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 29/67 (43%), Positives = 50/67 (74%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + + Y A+++E+VRSG++AVPRGQ EA+ + G T+ + R +++PQ +R I+PP+T+Q Sbjct: 122 LGVGAYHGAYVSEVVRSGILAVPRGQFEASASQGFTYIQQMRYIIVPQTIRIILPPMTNQ 181 Query: 331 YLNLLKN 337 +NL+K Sbjct: 182 MVNLIKK 188 Score = 43.5 bits (101), Expect = 0.060, Method: Compositional matrix adjust. Identities = 23/62 (37%), Positives = 39/62 (62%) Query: 88 AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147 A + GF+ T ++ ++ ATI GT+ G S K++ R+YVE+F+N+P ++ IFF Sbjct: 43 AFINGFIYTLEVSILALLIATIFGTIGGVMATSRFKIIRAYTRIYVELFQNVPLVIQIFF 102 Query: 148 LY 149 L+ Sbjct: 103 LF 104 >gi|159037031|ref|YP_001536284.1| polar amino acid ABC transporter, inner membrane subunit [Salinispora arenicola CNS-205] gi|157915866|gb|ABV97293.1| polar amino acid ABC transporter, inner membrane subunit [Salinispora arenicola CNS-205] Length = 235 Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 64/187 (34%), Positives = 99/187 (52%), Gaps = 17/187 (9%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDK-PVLG-QFNFIGGSTVSPEFMSLYIALS 274 + +PL + F FGLP AL F + P L F+ +G T P F IAL Sbjct: 59 RNMPLTIVMFFAAFGLP-----ALGSNADFLRIPGLDIVFSRLG--TDLPYFRFGLIALV 111 Query: 275 CYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNL 334 YTAAF+ E +RSG+ AVP GQ EAA +LGLT + R V+LPQ+ + + PL S + + Sbjct: 112 LYTAAFVCEALRSGVNAVPAGQAEAARSLGLTFTQNLRHVVLPQSWAASVVPLGSVIIAM 171 Query: 335 LKNSSLAVAVGF----ADLVSVGGTIINQTGQAIEIILIWMFI-YLSLSIMIALFMNRLN 389 +KNS+L +GF DL + + G+ + I + I YL +++ + + ++R+ Sbjct: 172 IKNSAL---IGFFGVVGDLSQTADQLTSAGGEPFIPVAIGISIGYLIMTVPLGVLLDRIE 228 Query: 390 AKIALKE 396 + A+ Sbjct: 229 RRQAVAR 235 >gi|226362676|ref|YP_002780454.1| ABC transporter substrate-binding/permease protein [Rhodococcus opacus B4] gi|226241161|dbj|BAH51509.1| putative ABC transporter substrate-binding/permease protein [Rhodococcus opacus B4] Length = 603 Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 42/117 (35%), Positives = 76/117 (64%), Gaps = 5/117 (4%) Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339 +I EI RSG+ +V GQ+EA+ ALG ++RK+ LV++PQ +R ++P L +Q+++L+K+SS Sbjct: 465 YIGEIFRSGIQSVEPGQLEASRALGFSYRKSMTLVVVPQGVRRVLPALMNQFISLIKDSS 524 Query: 340 LAVAVGF----ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 L +G +L +VG + QTG ++ +F YL+L+I + +N ++ ++ Sbjct: 525 LIYFLGLLVTQRELFAVGRDLNAQTGNLSPLVAAGLF-YLALTIPLTHLVNYIDNRL 580 Score = 41.6 bits (96), Expect = 0.22, Method: Compositional matrix adjust. Identities = 20/58 (34%), Positives = 32/58 (55%) Query: 91 VGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 G NT LA + I T++G L+ +S + + W RVY +VFR +P +V+I + Sbjct: 377 TGLPNTLILALASGIVGTVLGMLLAMAGISRTRWLRWPARVYTDVFRGLPAVVIILIV 434 >gi|15890450|ref|NP_356122.1| ABC transporter, membrane spanning protein (amino acid) [Agrobacterium tumefaciens str. C58] gi|15158680|gb|AAK88907.1| ABC transporter, membrane spanning protein (amino acid) [Agrobacterium tumefaciens str. C58] Length = 216 Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 47/129 (36%), Positives = 73/129 (56%), Gaps = 4/129 (3%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 ++++ IA + + +AF+ EI R G+ AVP+GQ EAA ALGL + + V+LPQA + +P Sbjct: 85 WIAVAIAFTLHASAFLGEIWRGGIQAVPKGQTEAANALGLHYVSRMKDVVLPQAFKISLP 144 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII----LIWMFIYLSLSIMI 381 + L+K +SLA VGF +L G + NQT + + + +I+ I LS+ Sbjct: 145 ATIGFLVQLIKGTSLAAIVGFVELSRAGQIVSNQTFRPLTVFAIVGIIYFLICWPLSLWG 204 Query: 382 ALFMNRLNA 390 A RL A Sbjct: 205 AGVEKRLQA 213 >gi|126175590|ref|YP_001051739.1| polar amino acid ABC transporter inner membrane subunit [Shewanella baltica OS155] gi|125998795|gb|ABN62870.1| polar amino acid ABC transporter, inner membrane subunit [Shewanella baltica OS155] Length = 226 Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 41/123 (33%), Positives = 76/123 (61%), Gaps = 4/123 (3%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IA + A+I+EI+R+G+ AV +GQ EAA +LGL+ + ++LPQA+++I+P L ++ Sbjct: 101 IAFGLNSGAYISEIIRAGIQAVDKGQTEAARSLGLSKAMTMKSIILPQAIKNILPALGNE 160 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA----IEIILIWMFIYLSLSIMIALFMN 386 ++ LLK +++ +G DL+ G I ++T + LI++F+ S + +++ F Sbjct: 161 FIVLLKETAVIGFIGGVDLMRAGEIIRSRTFEDSVPLFTCALIYLFLTYSFTFVLSKFEK 220 Query: 387 RLN 389 RL Sbjct: 221 RLK 223 >gi|257081536|ref|ZP_05575897.1| ABC-type amino acid transport system [Enterococcus faecalis E1Sol] gi|256989566|gb|EEU76868.1| ABC-type amino acid transport system [Enterococcus faecalis E1Sol] Length = 507 Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 63/225 (28%), Positives = 108/225 (48%), Gaps = 36/225 (16%) Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRH-----FHEKTGKALPLLY 223 MFL GL+ + T V LG+++ +F T F +K G + +Y Sbjct: 277 MFLRGAGLTLFIALIGT-----VVGTTLGLLIGVFRTIPDSENPVARFFQKLGNLILSIY 331 Query: 224 ISTFLIFGLPTLVL-------IALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 I F G P +V +AL + + D+ V +L+I +S Sbjct: 332 IEVFR--GTPMMVQAMVIFYGLALAFGISLDRTV----------------AALFI-VSVN 372 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 T A+++EIVR G+ AV +GQ EAA A+G+TH + R V++PQ +R+I+P ++++ +K Sbjct: 373 TGAYMSEIVRGGIFAVDKGQFEAAQAIGMTHGQTMRKVVIPQVLRNILPATGNEFVINIK 432 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 ++++ +G ADL G Q + I +YL ++ +I Sbjct: 433 DTAVLSVIGVADLFFQGNAASGANFQFFQTFTIVGIMYLVMTFVI 477 >gi|229056620|ref|ZP_04196026.1| Amino acid ABC transporter [Bacillus cereus AH603] gi|228720689|gb|EEL72247.1| Amino acid ABC transporter [Bacillus cereus AH603] Length = 225 Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 49/157 (31%), Positives = 92/157 (58%), Gaps = 14/157 (8%) Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244 T + + +F++GI+L+ T L+R + + + +Y+S +I G P LV + + + Sbjct: 26 TTIPLTLITFIIGIILATL-TALARISGSRILQWIARIYVS--IIRGTPLLVQL---FII 79 Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304 + P L V P + + I S A+ +EI+R+ ++++P+GQ EAA +G Sbjct: 80 FYGLPTLN-------IEVEP-YTAAVIGFSLNVGAYASEIIRASILSIPKGQWEAAYTIG 131 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341 +T+ +A + V+LPQA R IPPL++ +++L+K++SLA Sbjct: 132 MTYPQALKRVILPQATRVSIPPLSNTFISLVKDTSLA 168 Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust. Identities = 20/68 (29%), Positives = 34/68 (50%) Query: 82 DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141 +S+A + T L I I+ TL R+S ++++ WI R+YV + R P Sbjct: 13 QTSFAPMLKEAVFTTIPLTLITFIIGIILATLTALARISGSRILQWIARIYVSIIRGTPL 72 Query: 142 LVVIFFLY 149 LV +F ++ Sbjct: 73 LVQLFIIF 80 >gi|327468421|gb|EGF13906.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK330] gi|327472448|gb|EGF17879.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK408] Length = 230 Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 40/122 (32%), Positives = 73/122 (59%), Gaps = 2/122 (1%) Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 AA IAE+ ++ +AVP+GQ EA +++GLT + ++LPQA R +P LT+ LNL+++ Sbjct: 109 AAMIAEVFKAAYLAVPKGQTEAGLSIGLTPVQTFLRIVLPQAFRIALPNLTTALLNLMRD 168 Query: 338 SSLAVAVGFADLVSVGGTII--NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395 ++LA +G D++ G +I N ++E IY ++++++L L + +K Sbjct: 169 AALAYTIGAVDVMGAGQNLISRNLGNYSLETYTAVALIYWGIALVVSLASQLLEKSLTVK 228 Query: 396 EK 397 E+ Sbjct: 229 ER 230 >gi|222085838|ref|YP_002544369.1| general L-amino acid ABC transporter [Agrobacterium radiobacter K84] gi|221723286|gb|ACM26442.1| general L-amino acid ABC transporter [Agrobacterium radiobacter K84] Length = 384 Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 32/82 (39%), Positives = 58/82 (70%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I +S +T+A++AE++R GL AVP+GQ E A +LGL + + RL++LPQA++ +IP + + Sbjct: 252 IGVSIFTSAYMAEVIRGGLQAVPKGQFEGADSLGLGYWQKMRLIVLPQAIKLVIPGIVNT 311 Query: 331 YLNLLKNSSLAVAVGFADLVSV 352 ++ + K++SL + DL+ + Sbjct: 312 FIGMFKDTSLISIINMFDLLGI 333 >gi|313107729|ref|ZP_07793911.1| hypothetical protein PA39016_001060056 [Pseudomonas aeruginosa 39016] gi|187939706|gb|ACD38848.1| polar amino acid uptake transporter family protein [Pseudomonas aeruginosa] gi|310880413|gb|EFQ39007.1| hypothetical protein PA39016_001060056 [Pseudomonas aeruginosa 39016] Length = 221 Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 43/134 (32%), Positives = 74/134 (55%), Gaps = 4/134 (2%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P ++S+ I+L+ + A +E R L ++ Q +A +ALGLT R V+ PQA+ Sbjct: 87 PPYVSVAISLTLFMTAITSETFRGALKSIAAEQHDACVALGLTMRVKVFYVVFPQALLRA 146 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE----IILIWMFIYLSLSI 379 +PPL S ++L K S+L +VG ADL+ VG I N T + +E + +I+ + L+ Sbjct: 147 VPPLLSNLVSLFKESALISSVGVADLMFVGQNISNSTARPVEFLSAVAVIYFLVAFPLTR 206 Query: 380 MIALFMNRLNAKIA 393 ++ + R+ + A Sbjct: 207 LVGVVEARMLRRFA 220 >gi|170016505|ref|YP_001727424.1| ABC-type amino acid transport system, permease component [Leuconostoc citreum KM20] gi|169803362|gb|ACA81980.1| ABC-type amino acid transport system, permease component [Leuconostoc citreum KM20] Length = 219 Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 50/165 (30%), Positives = 84/165 (50%), Gaps = 30/165 (18%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPTLVLIALKYQL 244 + S + G V+ + +F + G + LPLL I F+ F LP K + Sbjct: 34 ILSLIFGSVVGIIQFERLPYFSKFVGTINNVIRNLPLLLIIFFVYFALP-------KIGI 86 Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304 H P F + +A+S + +A +AEIVR GL ++ GQ E A A G Sbjct: 87 HL-----------------PIFWATVVAMSTFESAMLAEIVRGGLESIDIGQFEGARANG 129 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349 L++ + ++LPQA + +IPP+ SQ ++L+K++SLA+ + A++ Sbjct: 130 LSNMQTMIYIILPQAYKKMIPPIISQLISLVKDTSLAMGIVLAEM 174 >gi|163793104|ref|ZP_02187080.1| amino acid ABC transporter, permease protein [alpha proteobacterium BAL199] gi|159181750|gb|EDP66262.1| amino acid ABC transporter, permease protein [alpha proteobacterium BAL199] Length = 449 Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 44/137 (32%), Positives = 75/137 (54%), Gaps = 4/137 (2%) Query: 261 TVSPEFMSLYIALSC-YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319 T++P+ + L I C + AA++AEIVR GL A+ GQ EAA A+GL + K L+++PQA Sbjct: 307 TLNPDKLVLVIVAVCIFAAAYMAEIVRGGLQAINTGQYEAARAVGLNYWKMMTLIVMPQA 366 Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFAD---LVSVGGTIINQTGQAIEIILIWMFIYLS 376 ++ +IP + ++ LLK+++L +G D +V G G E +L F++ Sbjct: 367 LKLMIPNIVGNFIGLLKDTTLVSIIGLYDILLMVRASGQDPKWLGMHTEPMLFAAFVFFV 426 Query: 377 LSIMIALFMNRLNAKIA 393 + ++ + L I Sbjct: 427 ICFAMSKYSQHLERTIG 443 >gi|323485959|ref|ZP_08091291.1| hypothetical protein HMPREF9474_03042 [Clostridium symbiosum WAL-14163] gi|323693047|ref|ZP_08107267.1| hypothetical protein HMPREF9475_02130 [Clostridium symbiosum WAL-14673] gi|323400721|gb|EGA93087.1| hypothetical protein HMPREF9474_03042 [Clostridium symbiosum WAL-14163] gi|323502928|gb|EGB18770.1| hypothetical protein HMPREF9475_02130 [Clostridium symbiosum WAL-14673] Length = 220 Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 45/128 (35%), Positives = 77/128 (60%), Gaps = 4/128 (3%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 +F + AL A+++EI+R+G+ AV GQMEAA +LGL +A + V+LPQA+++I+ Sbjct: 89 KFTCVCTALVLNATAYVSEIIRAGIQAVDPGQMEAARSLGLNTSQAMKKVILPQALKNIL 148 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY----LSLSIM 380 P L ++++ +K +SLA DL++ T+ +E ++I IY +LS + Sbjct: 149 PALGNEFVTDIKETSLASTFFLGDLMTTFRTLNGALYLTLEPLIIVGIIYFLLTFTLSKL 208 Query: 381 IALFMNRL 388 IA+F R+ Sbjct: 209 IAVFERRM 216 >gi|317046297|ref|YP_004113945.1| polar amino acid ABC transporter inner membrane subunit [Pantoea sp. At-9b] gi|316947914|gb|ADU67389.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea sp. At-9b] Length = 509 Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 56/156 (35%), Positives = 85/156 (54%), Gaps = 11/156 (7%) Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286 + + G P L+ + L Y VL +F G SP F S +AL AF AEI+R Sbjct: 59 YTLRGTPVLLQLILLYN------VLPEF----GLRFSP-FTSALLALMINETAFCAEIIR 107 Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346 G++A R Q AA A G + K V++PQA+R+I+P + ++ + LLK++SLA VG Sbjct: 108 GGIMATDRDQSMAAQAFGYSRTKEMIHVVIPQALRAILPTMGNETVGLLKSTSLASVVGV 167 Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382 +L G I++Q I +++ IYL LS ++A Sbjct: 168 NELTMRGQAIVSQNFLFIPVLVASGGIYLILSTLLA 203 >gi|190895142|ref|YP_001985435.1| putative amino acid ABC transporter permease [Rhizobium etli CIAT 652] gi|190700803|gb|ACE94885.1| probable amino acid ABC transporter, permease protein [Rhizobium etli CIAT 652] Length = 222 Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 51/167 (30%), Positives = 88/167 (52%), Gaps = 24/167 (14%) Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279 P L F+ FGLP+ I LK+ + F + AL+ TAA Sbjct: 68 PFLVQLFFIFFGLPS---IGLKFSVSF---------------------AAIAALTVNTAA 103 Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339 +IAE++R G+ +P GQ+EA ALGL R+ ++L ++R++ P L++Q++ L+ SS Sbjct: 104 YIAEVLRGGVDGLPYGQIEAGKALGLNRRQIFFDIILKPSVRAVYPGLSAQFVLLMLTSS 163 Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386 + ++ +L I +Q+ ++ E+ + IYL+LSI I+ F+ Sbjct: 164 VVASISAPELTYSAQIIESQSFRSFEVYFVVTGIYLALSICISSFLR 210 >gi|168181318|ref|ZP_02615982.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Clostridium botulinum Bf] gi|237793771|ref|YP_002861323.1| amino acid ABC transporter permease [Clostridium botulinum Ba4 str. 657] gi|182675517|gb|EDT87478.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Clostridium botulinum Bf] gi|229262160|gb|ACQ53193.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Clostridium botulinum Ba4 str. 657] Length = 211 Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 37/116 (31%), Positives = 69/116 (59%), Gaps = 1/116 (0%) Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 A++AE R+G+ ++ +GQ+EAA LG T+ + +++PQA+R++IPP+ ++ +NL+K+ Sbjct: 96 GAYLAETFRAGIESIDKGQVEAAKVLGFTYNQTMFKIIVPQAIRNVIPPICNESINLIKD 155 Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393 S+L A+G D++ ++ + I I IYL ++ + L L K A Sbjct: 156 SALVAAIGIGDMLRAAKEVVTR-DFTITPFFIAAAIYLLITAFLVLIFRTLEKKYA 210 >gi|139438499|ref|ZP_01772015.1| Hypothetical protein COLAER_01007 [Collinsella aerofaciens ATCC 25986] gi|133776038|gb|EBA39858.1| Hypothetical protein COLAER_01007 [Collinsella aerofaciens ATCC 25986] Length = 682 Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 41/128 (32%), Positives = 80/128 (62%), Gaps = 3/128 (2%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +A++C +A++AEI R+G+ +VP GQ EAA +LG+T + +++PQA+R +IP +TS+ Sbjct: 558 LAINC--SAYLAEIFRAGIESVPHGQAEAAYSLGMTWSQVMSRIVVPQAVRYVIPTMTSE 615 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++ L K++SL +VG +L+ + TG I ++ YL ++I + + ++ Sbjct: 616 FVMLYKDTSLLSSVGVMELMLFSKNLTATTGNITPYICAALY-YLVVTIPLIHIVTKVEH 674 Query: 391 KIALKEKK 398 ++A + K+ Sbjct: 675 RLAERSKR 682 >gi|15967029|ref|NP_387382.1| putative amino-acid transport system permease ABC transporter protein [Sinorhizobium meliloti 1021] gi|307302495|ref|ZP_07582252.1| polar amino acid ABC transporter, inner membrane subunit [Sinorhizobium meliloti BL225C] gi|307316175|ref|ZP_07595619.1| polar amino acid ABC transporter, inner membrane subunit [Sinorhizobium meliloti AK83] gi|15076302|emb|CAC47855.1| Putative amino-acid transport system permease ABC transporter [Sinorhizobium meliloti 1021] gi|306898015|gb|EFN28757.1| polar amino acid ABC transporter, inner membrane subunit [Sinorhizobium meliloti AK83] gi|306903165|gb|EFN33755.1| polar amino acid ABC transporter, inner membrane subunit [Sinorhizobium meliloti BL225C] Length = 226 Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 39/128 (30%), Positives = 76/128 (59%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + I + A+ +EI+R+ + +VPRGQ EAA ++G++ +A R +LPQA R +P Sbjct: 89 FPAALIGFTLNIGAYSSEIIRAVISSVPRGQWEAAYSIGMSWSQAMRRTILPQAGRVAVP 148 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PL++ +++L+K++SLA A+ +L I+ + + + + + IYL +S +++ Sbjct: 149 PLSNTFISLVKDTSLAAAITVPELFQTAQRIVATSYEPLILYIEAALIYLVMSSVLSALQ 208 Query: 386 NRLNAKIA 393 +L + A Sbjct: 209 GKLEQRFA 216 >gi|218682497|ref|ZP_03530098.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium etli CIAT 894] Length = 226 Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 51/170 (30%), Positives = 92/170 (54%), Gaps = 14/170 (8%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 + SF G+VL L T ++R F A+ Y+ ++I G P LV + + + + P Sbjct: 28 LLSFAFGLVLGLI-TAIARLFGPAPVAAIARFYV--WVIRGTPLLVQL---FVIFYGLPS 81 Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 +G + F + I + A+ +EI+R+ + +VP+GQ EAA ++G++ R+A Sbjct: 82 IG--------ILLDAFPAALIGFTLNIGAYSSEIIRAVISSVPKGQWEAAYSIGMSWRQA 133 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 +LPQA R +PPL++ +++L+K++SLA A+ +L I+ T Sbjct: 134 MSRTILPQAARVAVPPLSNTFISLVKDTSLAAAITVPELFQAAQRIVATT 183 >gi|153827643|ref|ZP_01980310.1| amino acid ABC transporter, permease protein [Vibrio cholerae MZO-2] gi|149737881|gb|EDM52786.1| amino acid ABC transporter, permease protein [Vibrio cholerae MZO-2] Length = 223 Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 54/170 (31%), Positives = 95/170 (55%), Gaps = 13/170 (7%) Query: 183 MDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV-LIALK 241 + T ++ + V ++L+LF + R F L LYIS F G P LV L L Sbjct: 19 LGTTLEMASWGLVFALILALFLANI-RVFKVPVLAPLSQLYISFFR--GTPLLVQLFLLY 75 Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301 Y L P+L + F + I L+ + AA++AE +R+ +I + R QMEA++ Sbjct: 76 YGLPQVFPLLVGLD---------AFSAAVIGLTLHFAAYMAESIRAAIIGIDRSQMEASL 126 Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 ++G+T +A R ++LPQA R +P L + +++++K++SLA +G A++++ Sbjct: 127 SVGMTTSQAMRRIILPQATRVALPSLMNYFIDMIKSTSLAFTLGVAEIMA 176 >gi|66043626|ref|YP_233467.1| amino acid ABC transporter permease [Pseudomonas syringae pv. syringae B728a] gi|63254333|gb|AAY35429.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Pseudomonas syringae pv. syringae B728a] gi|330971784|gb|EGH71850.1| amino acid ABC transporter permease [Pseudomonas syringae pv. aceris str. M302273PT] Length = 222 Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 39/122 (31%), Positives = 70/122 (57%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I S AA+ EI+R+ + +V RGQ EAA ++G+T + R +LPQA R+ +PPL + Sbjct: 94 IGFSLNMAAYACEILRAAISSVERGQWEAAASIGMTRWQTMRRAILPQAARTALPPLGNS 153 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 +++L+K+++LA + +L I +T + + L IY L+ ++ N+L A Sbjct: 154 FISLVKDTALAATIQVPELFRQAQLITARTFEIFTMYLAAALIYWILATALSHLQNKLEA 213 Query: 391 KI 392 ++ Sbjct: 214 RV 215 >gi|320093690|ref|ZP_08025558.1| ABC superfamily ATP binding cassette transporter, permease protein [Actinomyces sp. oral taxon 178 str. F0338] gi|319979350|gb|EFW10839.1| ABC superfamily ATP binding cassette transporter, permease protein [Actinomyces sp. oral taxon 178 str. F0338] Length = 312 Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 38/99 (38%), Positives = 63/99 (63%), Gaps = 3/99 (3%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F ++ L A++AEI+R+GL++V +GQ EAA ALG+ R ++LPQAMR I+P Sbjct: 150 FWMAFVGLGLNEGAYLAEIMRAGLLSVDKGQWEAATALGMPRSLIFRRIVLPQAMRVIVP 209 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364 P+ ++ +++LK +SL A+ F ++ + Q GQA+ Sbjct: 210 PIGNETISMLKTTSLVSAIPFTLELTF---VARQKGQAM 245 >gi|254449741|ref|ZP_05063178.1| ABC transporter permease protein [Octadecabacter antarcticus 238] gi|198264147|gb|EDY88417.1| ABC transporter permease protein [Octadecabacter antarcticus 238] Length = 221 Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 53/178 (29%), Positives = 90/178 (50%), Gaps = 13/178 (7%) Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247 +IF FV G+ L L L+R+ + + +I F P LV I + +F Sbjct: 26 RIFAICFVTGLSLGLMMG-LARYSVRRWLRWPAACFIEFFR--NTPVLVQI---FWFYFA 79 Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307 P+L F M+ + ++ +AAF AEI R G+ ++ GQ EA A+G+ H Sbjct: 80 FPILAPFEI-------SALMAAALGITLNSAAFSAEIFRGGIQSIDPGQWEAGRAIGMRH 132 Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365 R+ ++LPQA+R ++P LT++ + + K ++LA A+ +AD++ I + IE Sbjct: 133 REIMARIILPQAVRRMLPALTNRGIEIFKMTTLASAIAYADVLHQARLIASVNYNPIE 190 Score = 39.7 bits (91), Expect = 0.75, Method: Compositional matrix adjust. Identities = 21/71 (29%), Positives = 34/71 (47%) Query: 79 YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138 + S Y A+ G +NT + + +G ++G R S + + W ++E FRN Sbjct: 7 FGSVWEYRAALWTGLINTVRIFAICFVTGLSLGLMMGLARYSVRRWLRWPAACFIEFFRN 66 Query: 139 IPPLVVIFFLY 149 P LV IF+ Y Sbjct: 67 TPVLVQIFWFY 77 >gi|55377276|ref|YP_135126.1| amino acid ABC transporter permease protein [Haloarcula marismortui ATCC 43049] gi|55230001|gb|AAV45420.1| amino acid ABC transporter permease protein [Haloarcula marismortui ATCC 43049] Length = 325 Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 63/213 (29%), Positives = 109/213 (51%), Gaps = 10/213 (4%) Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244 T + VFS LG L+L + R + + + L L Y T LI G P L+A + L Sbjct: 110 TTVLLTVFSVCLGFALAL-PLSVVRVYGGRWARWLALSY--TELIRGTP---LLAQLFVL 163 Query: 245 HFDKPVLGQFNFIGGSTV----SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300 +F + + G V + F I+ + +AA+ +E +R+ L +V GQ+ AA Sbjct: 164 YFATSLTQVLRGVPGVGVGFIPAQAFWVAVISFTLNSAAYQSEYLRASLDSVDGGQLTAA 223 Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 A+GL+ + R V++PQ +R +P T++ + L+K SSLA + +L T+ N+T Sbjct: 224 RAIGLSKLEGIRYVVVPQGLRLALPSWTNELVYLIKYSSLASFITVQELYGRTSTLANET 283 Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393 Q E+ ++ +YL+L + + M+R+ + A Sbjct: 284 YQYTELFVLVAILYLALVVSASALMDRVESHTA 316 >gi|283457667|ref|YP_003362252.1| amino acid ABC transporter permease [Rothia mucilaginosa DY-18] gi|283133667|dbj|BAI64432.1| ABC-type amino acid transport system, permease component [Rothia mucilaginosa DY-18] Length = 227 Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 63/211 (29%), Positives = 99/211 (46%), Gaps = 24/211 (11%) Query: 193 SFVLGIVLSLF------ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246 SFV+G VL+L + R + + PL + T I G+ T ++QL F Sbjct: 34 SFVIGTVLALMRISPVPSLRWVGTAYVHLVRNTPLTILMTLAILGVWT------QFQLSF 87 Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306 F F+ I LS Y AAFI E +RSG+ VP+GQ EAA A+GL Sbjct: 88 SHDFDTNF-----------FVYAVIVLSIYHAAFICEAIRSGVNTVPKGQAEAARAIGLG 136 Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN-QTGQAIE 365 RLV+ PQA+R I PL + + L KN+++A A+ + ++I + Sbjct: 137 FFDTARLVIFPQALRGSITPLGNTLIALAKNTTVASVASVAEASGMMKSMIEFDANMVLA 196 Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 I +I+ ++ + + I + + K+A+K Sbjct: 197 IFMIFAMGFVIIVVPIGVLTTWSSRKLAVKR 227 >gi|255327588|ref|ZP_05368654.1| L-cystine transport system permease protein TcyB [Rothia mucilaginosa ATCC 25296] gi|255295262|gb|EET74613.1| L-cystine transport system permease protein TcyB [Rothia mucilaginosa ATCC 25296] Length = 224 Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 38/108 (35%), Positives = 65/108 (60%), Gaps = 4/108 (3%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I +S +T A++AE RS + A+PRGQ EAA L T + R V++PQA+R +P L + Sbjct: 94 ITMSLHTGAYVAETFRSAVAAIPRGQFEAAATLNFTRMQTLRHVVIPQAVRIALPNLGNN 153 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI----EIILIWMFIY 374 +++L+K +SL + DL G I ++T + + E+ +I++ I+ Sbjct: 154 FIDLIKGTSLVSVISMVDLFQTGKQIASRTFEPLAMYSEVAIIYLVIF 201 >gi|196037333|ref|ZP_03104644.1| amino acid ABC transporter, permease protein [Bacillus cereus NVH0597-99] gi|196031575|gb|EDX70171.1| amino acid ABC transporter, permease protein [Bacillus cereus NVH0597-99] Length = 214 Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 49/157 (31%), Positives = 92/157 (58%), Gaps = 14/157 (8%) Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244 T + + +F++GI+L+ T L+R + + + +Y+S +I G P LV + + + Sbjct: 15 TTIPLTLITFIIGIILATL-TALARISGSRILQWIARIYVS--IIRGTPLLVQL---FII 68 Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304 + P L V P + + I S A+ +EI+R+ ++++P+GQ EAA +G Sbjct: 69 FYGLPTLN-------VEVEP-YTAAVIGFSLNVGAYASEIIRASILSIPKGQWEAAYTIG 120 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341 +T+ +A + V+LPQA R IPPL++ +++L+K++SLA Sbjct: 121 MTYPQALKRVILPQATRVSIPPLSNTFISLVKDTSLA 157 Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust. Identities = 15/41 (36%), Positives = 26/41 (63%) Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 I+ TL R+S ++++ WI R+YV + R P LV +F ++ Sbjct: 29 ILATLTALARISGSRILQWIARIYVSIIRGTPLLVQLFIIF 69 >gi|296131956|ref|YP_003639203.1| polar amino acid ABC transporter, inner membrane subunit [Thermincola sp. JR] gi|296030534|gb|ADG81302.1| polar amino acid ABC transporter, inner membrane subunit [Thermincola potens JR] Length = 221 Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 33/89 (37%), Positives = 58/89 (65%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 F++ IA S AA+ AEI R G++++PRGQ EAA LG T + ++LPQ ++ I+ Sbjct: 91 RFIAAVIAFSLNYAAYFAEIYRGGILSIPRGQYEAAAVLGFTRTQTFVRIILPQVIKRIL 150 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVG 353 PP++++ + L+K+++L +G ++L V Sbjct: 151 PPVSNEVITLVKDTALVTVLGISELFRVA 179 >gi|258540995|ref|YP_003175494.1| amino acid ABC transporter permease [Lactobacillus rhamnosus Lc 705] gi|257152671|emb|CAR91643.1| ABC transporter, amino acid transporter permease protein [Lactobacillus rhamnosus Lc 705] Length = 482 Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 60/205 (29%), Positives = 109/205 (53%), Gaps = 26/205 (12%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 +F ++G +L+L +LSR++ K + +YI I G P LV + + F + Sbjct: 298 LFGTIIGTLLALM--KLSRNW---LAKVVANIYIE--FIRGTPLLVQ---AFIVFFGTQI 347 Query: 251 LGQ--FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308 LG F+ G+ IA++ + A++AEI+R G+ +VP GQ EAA +LGL Sbjct: 348 LGLDLSAFVAGA----------IAMAINSGAYVAEIIRGGINSVPVGQTEAARSLGLHQS 397 Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA----I 364 +A R V+LPQAM++I P L ++++ +K SS+ +G +L+ G + + + + Sbjct: 398 QAMRYVILPQAMKNIWPALGNEFVTDIKESSVLSVIGATELMFEGTVVQGASFKPFLPLV 457 Query: 365 EIILIWMFIYLSLSIMIALFMNRLN 389 + +++ + +LS ++ L R N Sbjct: 458 VVAILYFLMTFTLSRLLRLIEKRFN 482 >gi|218674961|ref|ZP_03524630.1| probable amino acid ABC transporter, permease protein [Rhizobium etli GR56] Length = 219 Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 40/115 (34%), Positives = 65/115 (56%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P +++ +AL +TAAF+AEI R + +V RGQ EA+ +L + + R V+LPQA+R Sbjct: 84 PAWLAAGLALILWTAAFLAEIWRGCVESVARGQWEASASLAMGRLQQMRYVILPQALRVA 143 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378 IPP + ++K ++L +GF +L G + N T Q + + IY +L Sbjct: 144 IPPTVGFSVQIVKGTALTSIIGFVELSKAGTVVTNATFQPFTVYGLVALIYFALC 198 >gi|114321289|ref|YP_742972.1| polar amino acid ABC transporter, inner membrane subunit [Alkalilimnicola ehrlichii MLHE-1] gi|114227683|gb|ABI57482.1| L-glutamine ABC transporter membrane protein [Alkalilimnicola ehrlichii MLHE-1] Length = 218 Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 41/127 (32%), Positives = 74/127 (58%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + I L+ A+I EIV ++++ +GQ +A +ALGL++ + ++ P A R IP Sbjct: 89 FAAASICLAMNAGAYITEIVCGAVLSIDKGQTDAGLALGLSYPQVMLHIVGPLAFRRSIP 148 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PL +Q++ LK+S+L + +G A+L G + QTG+A+EI YL ++ +A+ M Sbjct: 149 PLGNQFIISLKDSALFLVIGVAELAQRGEQLTAQTGRALEIWTAVAVFYLIMTFTLAMIM 208 Query: 386 NRLNAKI 392 + ++ Sbjct: 209 RAIEQRM 215 >gi|307132728|ref|YP_003884744.1| amino acid ABC transporter permease [Dickeya dadantii 3937] gi|306530257|gb|ADN00188.1| Amino acid ABC transporter, permease protein [Dickeya dadantii 3937] Length = 312 Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 42/129 (32%), Positives = 75/129 (58%), Gaps = 3/129 (2%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + L+ +A+ AEI+R G++ V GQ EAA ALGL + T ++LPQA+RSI+P ++ Sbjct: 166 LGLTLVQSAYTAEIIRGGILGVDAGQFEAAAALGLPGYRRTWRIILPQALRSILPTGFNE 225 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL---IWMFIYLSLSIMIALFMNR 387 ++L K +S+ + +L I N+T Q I +++ +W + S+ ++ F+ R Sbjct: 226 IISLAKGTSVVYVLALPELFYTVQVIYNRTQQVIPLLMVATVWYLVITSVLSVLQYFVER 285 Query: 388 LNAKIALKE 396 A+ A++E Sbjct: 286 YVARGAVRE 294 >gi|302517800|ref|ZP_07270142.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces sp. SPB78] gi|318061024|ref|ZP_07979745.1| transporter transmembrane component [Streptomyces sp. SA3_actG] gi|302426695|gb|EFK98510.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces sp. SPB78] Length = 340 Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 46/129 (35%), Positives = 74/129 (57%), Gaps = 4/129 (3%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I LS AA+ AE+VR+GL++V +GQ EAA ALGL R ++LPQA+R+I+P +Q Sbjct: 185 IGLSLNEAAYAAEVVRAGLLSVDQGQHEAAAALGLPRRFQFLRIVLPQALRAIVPGYVNQ 244 Query: 331 YLNLLKNSSLAVAVGFADLV----SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386 + L+K++SL V DL S+G T + + +W + SL + ++ Sbjct: 245 LIGLVKSTSLVFYVSLLDLFGSVQSLGSTYPGDIVPLLLVATVWYVLLTSLVSIAQFYVE 304 Query: 387 RLNAKIALK 395 R +++ AL+ Sbjct: 305 RRSSRGALR 313 >gi|209547001|ref|YP_002278919.1| polar amino acid ABC transporter inner membrane protein [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209538245|gb|ACI58179.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 325 Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 41/125 (32%), Positives = 72/125 (57%), Gaps = 3/125 (2%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I + + AA++AE VRSGL AVPRGQ EAA +LG+++ + ++LPQA+R + P L Sbjct: 196 IGYTVFNAAYVAEFVRSGLQAVPRGQREAAQSLGMSNWTVSTDIVLPQAIRFVQPALVGN 255 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQ--TGQAIEIILIWMF-IYLSLSIMIALFMNR 387 L++ ++L +G D + G I+ + A++ + ++MF +Y + I R Sbjct: 256 VLDVFNGATLVFIIGLTDFLRAGQMILADPSSSSAVQEVYVFMFAVYFLIGSAITFGARR 315 Query: 388 LNAKI 392 + A++ Sbjct: 316 MEARM 320 >gi|69248235|ref|ZP_00604685.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Enterococcus faecium DO] gi|257880069|ref|ZP_05659722.1| amino acid ABC transporter [Enterococcus faecium 1,230,933] gi|257891160|ref|ZP_05670813.1| amino acid ABC transporter [Enterococcus faecium 1,231,410] gi|257893974|ref|ZP_05673627.1| amino acid ABC transporter [Enterococcus faecium 1,231,408] gi|258614597|ref|ZP_05712367.1| amino acid ABC transporter, permease protein [Enterococcus faecium DO] gi|260560318|ref|ZP_05832494.1| amino acid ABC transporter [Enterococcus faecium C68] gi|261208255|ref|ZP_05922928.1| amino acid ABC transporter [Enterococcus faecium TC 6] gi|289565943|ref|ZP_06446382.1| amino acid ABC transporter [Enterococcus faecium D344SRF] gi|293553343|ref|ZP_06673979.1| amino acid ABC transporter, permease protein [Enterococcus faecium E1039] gi|293563074|ref|ZP_06677540.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Enterococcus faecium E1162] gi|293567501|ref|ZP_06678846.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Enterococcus faecium E1071] gi|294616566|ref|ZP_06696343.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Enterococcus faecium E1636] gi|294618840|ref|ZP_06698361.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Enterococcus faecium E1679] gi|68194486|gb|EAN08984.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Enterococcus faecium DO] gi|257814297|gb|EEV43055.1| amino acid ABC transporter [Enterococcus faecium 1,230,933] gi|257827520|gb|EEV54146.1| amino acid ABC transporter [Enterococcus faecium 1,231,410] gi|257830353|gb|EEV56960.1| amino acid ABC transporter [Enterococcus faecium 1,231,408] gi|260073663|gb|EEW61989.1| amino acid ABC transporter [Enterococcus faecium C68] gi|260077512|gb|EEW65230.1| amino acid ABC transporter [Enterococcus faecium TC 6] gi|289162227|gb|EFD10088.1| amino acid ABC transporter [Enterococcus faecium D344SRF] gi|291589744|gb|EFF21547.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Enterococcus faecium E1071] gi|291590576|gb|EFF22308.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Enterococcus faecium E1636] gi|291594915|gb|EFF26271.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Enterococcus faecium E1679] gi|291602567|gb|EFF32783.1| amino acid ABC transporter, permease protein [Enterococcus faecium E1039] gi|291604988|gb|EFF34456.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Enterococcus faecium E1162] Length = 213 Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 60/221 (27%), Positives = 111/221 (50%), Gaps = 41/221 (18%) Query: 185 TNAKIFVFSFV----LGIVLSLFATRLSRHF---------HEKTGKALPLLYISTFLIFG 231 T K+F+F+ + LGIVL+L LS HF + + PLL F+ +G Sbjct: 17 TTLKLFLFTLIGSLPLGIVLAL---GLSLHFKPLRYLLQTYVWVMRGTPLLLQLIFIFYG 73 Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291 LPT+ ++ FD+ F + IA AA+ AEI R G+ + Sbjct: 74 LPTIGIV-------FDR-----------------FEAALIAFILNYAAYFAEIFRGGIQS 109 Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 +P+GQ EAA L L+ + +++PQ + ++P + ++ +NL+K+SSL +G D++ Sbjct: 110 IPQGQYEAAQVLQLSPFQTVTKIVIPQVTKIVLPSVGNEVINLVKDSSLIYILGLGDVMR 169 Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 G + + + ++ + + IYL+L+ ++ + M ++ K+ Sbjct: 170 AGKIAMERDATLLPLLGVAI-IYLTLTGILTIVMKQVEGKL 209 >gi|310819142|ref|YP_003951500.1| glutamine ABC transporter substrate-binding protein [Stigmatella aurantiaca DW4/3-1] gi|309392214|gb|ADO69673.1| Glutamine ABC transporter substrate-binding protein [Stigmatella aurantiaca DW4/3-1] Length = 469 Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 46/125 (36%), Positives = 72/125 (57%), Gaps = 5/125 (4%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IALS AA+IAEI R+ + ++ +GQMEAA ALG++H A R V+LPQ R +IPPL ++ Sbjct: 344 IALSLNAAAYIAEIFRAAIESIDKGQMEAARALGMSHELAMRRVILPQTFRRLIPPLVNE 403 Query: 331 YLNLLKNSSLAVAVGFADLV----SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386 L K++SL + + +++ + GT + A I ++ I +LS + Sbjct: 404 LAALSKDTSLVMVIALPEMLYETKQLAGTYLRPEVYAWAAI-GYLLIVAALSALAQRLER 462 Query: 387 RLNAK 391 RL A+ Sbjct: 463 RLEAR 467 >gi|182678575|ref|YP_001832721.1| polar amino acid ABC transporter, inner membrane subunit [Beijerinckia indica subsp. indica ATCC 9039] gi|182634458|gb|ACB95232.1| polar amino acid ABC transporter, inner membrane subunit [Beijerinckia indica subsp. indica ATCC 9039] Length = 385 Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 35/78 (44%), Positives = 54/78 (69%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I ++ + +A++AE+VR GL AVP+GQ E A ALGL K +LV+LPQA+ +IP + + Sbjct: 253 IGVALFASAYMAEVVRGGLQAVPKGQFEGAAALGLPPWKTLQLVVLPQALAHVIPGIVNT 312 Query: 331 YLNLLKNSSLAVAVGFAD 348 ++ L K+++L AVG D Sbjct: 313 FIGLFKDTTLVAAVGIFD 330 >gi|25011698|ref|NP_736093.1| hypothetical protein gbs1658 [Streptococcus agalactiae NEM316] gi|24413238|emb|CAD47317.1| Unknown [Streptococcus agalactiae NEM316] Length = 221 Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 65/201 (32%), Positives = 104/201 (51%), Gaps = 20/201 (9%) Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252 F+LG ++ F L + H + + L ++IS L+ G+P +VL+ L Y F P +G Sbjct: 34 GFILGAIVGFFVA-LMKMSHLRLLRYLANIHIS--LMRGIPLMVLLFLIY---FGLPFIG 87 Query: 253 -QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311 Q + + S V MS +A+I+EI+R+ L+AV GQ EAA ALGL Sbjct: 88 IQLDAVTASIVGFTMMS---------SAYISEIIRAALLAVDHGQWEAARALGLKTPTIY 138 Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS----VGGTIINQTGQAIEII 367 R +++PQA R +P L++ L+++K SSL + D+ + VGGT + I + Sbjct: 139 RGIIIPQATRIALPSLSNVLLDMVKGSSLTAMITVPDIFNNAKIVGGTYSDYMTAYILVA 198 Query: 368 LIWMFIYLSLSIMIALFMNRL 388 LI+ I +I+ + RL Sbjct: 199 LIYWVICTLYAIIQDWWEKRL 219 >gi|77405794|ref|ZP_00782878.1| amino acid ABC transporter, permease protein [Streptococcus agalactiae H36B] gi|77408475|ref|ZP_00785213.1| amino acid ABC transporter, permease protein [Streptococcus agalactiae COH1] gi|77411932|ref|ZP_00788263.1| amino acid ABC transporter, permease protein [Streptococcus agalactiae CJB111] gi|77162029|gb|EAO73009.1| amino acid ABC transporter, permease protein [Streptococcus agalactiae CJB111] gi|77172917|gb|EAO76048.1| amino acid ABC transporter, permease protein [Streptococcus agalactiae COH1] gi|77175581|gb|EAO78366.1| amino acid ABC transporter, permease protein [Streptococcus agalactiae H36B] gi|319745516|gb|EFV97818.1| polar amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus agalactiae ATCC 13813] Length = 221 Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 65/201 (32%), Positives = 104/201 (51%), Gaps = 20/201 (9%) Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252 F+LG ++ F L + H + + L ++IS L+ G+P +VL+ L Y F P +G Sbjct: 34 GFILGAIVGFFVA-LMKMSHFRLLRYLANIHIS--LMRGIPLMVLLFLIY---FGLPFIG 87 Query: 253 -QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311 Q + + S V MS +A+I+EI+R+ L+AV GQ EAA ALGL Sbjct: 88 IQLDAVTASIVGFTMMS---------SAYISEIIRAALLAVDHGQWEAARALGLKTPTIY 138 Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS----VGGTIINQTGQAIEII 367 R +++PQA R +P L++ L+++K SSL + D+ + VGGT + I + Sbjct: 139 RGIIIPQATRIALPSLSNVLLDMVKGSSLTAMITVPDIFNNAKIVGGTYSDYMTAYILVA 198 Query: 368 LIWMFIYLSLSIMIALFMNRL 388 LI+ I +I+ + RL Sbjct: 199 LIYWVICTLYAIIQDWWEKRL 219 >gi|23098460|ref|NP_691926.1| glutamine ABC transporter permease [Oceanobacillus iheyensis HTE831] gi|22776686|dbj|BAC12961.1| glutamine ABC transporter permease [Oceanobacillus iheyensis HTE831] Length = 224 Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 41/117 (35%), Positives = 73/117 (62%), Gaps = 4/117 (3%) Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 + A+IAE+VR + ++ +GQ+EA +LGLT + R ++ PQA + +IPPL +Q++ +K Sbjct: 107 SGAYIAEVVRGSVDSIDKGQIEAGRSLGLTKNQTMRYIIWPQAFKRMIPPLGNQFIISIK 166 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEII----LIWMFIYLSLSIMIALFMNRLN 389 ++SL + +L+ G I++ A+EI L ++ I L+LS+++ L RLN Sbjct: 167 DTSLLSVILVPELMFQGRLIVSNQFIAVEIYTAVALFYLAITLTLSLILRLIERRLN 223 Score = 36.6 bits (83), Expect = 6.5, Method: Compositional matrix adjust. Identities = 18/52 (34%), Positives = 29/52 (55%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143 G T ++ G++ ++G + G GR+S NK + + +YVEV R P LV Sbjct: 25 GLYYTLLISIVGLLIGFVLGAIFGLGRISKNKFLFVLASIYVEVVRGTPVLV 76 >gi|312196941|ref|YP_004017002.1| polar amino acid ABC transporter inner membrane protein [Frankia sp. EuI1c] gi|311228277|gb|ADP81132.1| polar amino acid ABC transporter, inner membrane subunit [Frankia sp. EuI1c] Length = 350 Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 70/226 (30%), Positives = 115/226 (50%), Gaps = 18/226 (7%) Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLI-- 238 +T+ A VF + GIVL+L RLS + K++ LYI +L +P +V++ Sbjct: 105 ITLQVTAYSAVFGLLGGIVLAL--GRLSSN---PVLKSVSWLYI--WLFRSVPLIVVLIF 157 Query: 239 -----ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293 AL + P +F + + E I +S AA+ AE+VR+GL++V Sbjct: 158 LYNFGALYRTVSLGVPFGPRFLSFHEADLLGEMAIAVIGVSLNEAAYAAEVVRAGLLSVD 217 Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353 +GQ EAA ALGL R ++LPQA+R+IIP +Q + L+K +SL V D+ Sbjct: 218 QGQHEAAAALGLPRFYQFRRIVLPQALRAIIPSYVNQLIGLIKGTSLVFYVSLLDIFGKV 277 Query: 354 GTIINQ-TGQAIEIILI---WMFIYLSLSIMIALFMNRLNAKIALK 395 T+ + G I ++L+ W I S+ ++ ++ R ++ AL+ Sbjct: 278 QTMGSTYPGDVIPLLLVGTAWYVILTSIVSVVQYYVERYYSRGALR 323 >gi|257125595|ref|YP_003163709.1| polar amino acid ABC transporter inner membrane protein [Leptotrichia buccalis C-1013-b] gi|257049534|gb|ACV38718.1| polar amino acid ABC transporter, inner membrane subunit [Leptotrichia buccalis C-1013-b] Length = 245 Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 36/94 (38%), Positives = 66/94 (70%), Gaps = 5/94 (5%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IAL +AA++ E VRSG+ ++ +GQMEAA A G+ +R A +++PQA+++I+P L ++ Sbjct: 121 IALGMNSAAYVEETVRSGIESIDKGQMEAARATGMPYRMAMNEIIMPQAVKNILPALVNE 180 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364 ++NL K +S+ VG+ +V + T+ +++ QA+ Sbjct: 181 FINLFKETSI---VGYISVVDI--TMNSKSLQAV 209 >gi|199597667|ref|ZP_03211095.1| ABC-type amino acid transport system, permease and periplasmic component [Lactobacillus rhamnosus HN001] gi|229551247|ref|ZP_04439972.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus rhamnosus LMS2-1] gi|258509811|ref|YP_003172562.1| amino acid ABC transporter permease [Lactobacillus rhamnosus GG] gi|199591474|gb|EDY99552.1| ABC-type amino acid transport system, permease and periplasmic component [Lactobacillus rhamnosus HN001] gi|229315410|gb|EEN81383.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus rhamnosus LMS2-1] gi|257149738|emb|CAR88711.1| ABC transporter, amino acid transporter permease protein [Lactobacillus rhamnosus GG] gi|259651074|dbj|BAI43236.1| amino acid ABC transporter permease component [Lactobacillus rhamnosus GG] Length = 482 Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 60/205 (29%), Positives = 109/205 (53%), Gaps = 26/205 (12%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 +F ++G +L+L +LSR++ K + +YI I G P LV + + F + Sbjct: 298 LFGTIIGTLLALM--KLSRNW---LAKVVANIYIE--FIRGTPLLVQ---AFIVFFGTQI 347 Query: 251 LGQ--FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308 LG F+ G+ IA++ + A++AEI+R G+ +VP GQ EAA +LGL Sbjct: 348 LGLDLSAFVAGA----------IAMAINSGAYVAEIIRGGINSVPVGQTEAARSLGLHQS 397 Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA----I 364 +A R V+LPQAM++I P L ++++ +K SS+ +G +L+ G + + + + Sbjct: 398 QAMRYVILPQAMKNIWPALGNEFVTDIKESSVLSVIGATELMFEGTVVQGASFKPFLPLV 457 Query: 365 EIILIWMFIYLSLSIMIALFMNRLN 389 + +++ + +LS ++ L R N Sbjct: 458 VVAILYFIMTFTLSRLLRLIEKRFN 482 >gi|56413133|ref|YP_150208.1| ABC transporter membrane protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197362059|ref|YP_002141696.1| ABC transporter membrane protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|56127390|gb|AAV76896.1| putative ABC transporter membrane protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197093536|emb|CAR58998.1| putative ABC transporter membrane protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] Length = 222 Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 38/128 (29%), Positives = 75/128 (58%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I LS TAA+ +E +R+ + A+ +GQ EAA ++G+T + R +LPQA R +PPL++ Sbjct: 93 IGLSLNTAAYTSETLRAAISAIDKGQWEAAASIGMTPWQTLRRAILPQAARVALPPLSNS 152 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 +++L+K++SLA + +L I ++T + + L IY ++ +++ N Sbjct: 153 FISLVKDTSLAATIQVPELFRQAQLITSRTLEVFTMYLAASLIYWVMATVLSALQNYFEN 212 Query: 391 KIALKEKK 398 ++ +E++ Sbjct: 213 QLNRQERE 220 >gi|119387801|ref|YP_918835.1| polar amino acid ABC transporter, inner membrane subunit [Paracoccus denitrificans PD1222] gi|119378376|gb|ABL73139.1| amino acid ABC transporter membrane protein 1, PAAT family [Paracoccus denitrificans PD1222] Length = 222 Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 49/139 (35%), Positives = 79/139 (56%), Gaps = 7/139 (5%) Query: 247 DKPVLGQFNFI------GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300 + P L Q FI G ++SP +L +AL A+ EI+R+G+ ++PRGQ+EA Sbjct: 65 NTPFLVQIFFIFFGLPAAGISMSPNTAAL-VALVVNVGAYGTEIIRTGIESIPRGQIEAG 123 Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 ALGL+ + R V++ A+R+I P LTSQ++ L+ SS+ + DL S G + +T Sbjct: 124 RALGLSPVQIFRHVVMIPALRNIYPSLTSQFIYLMLTSSVVSIISANDLASAGADLNART 183 Query: 361 GQAIEIILIWMFIYLSLSI 379 + EI L+ +Y L++ Sbjct: 184 FASFEIYLVLTILYFLLAL 202 Score = 37.4 bits (85), Expect = 4.6, Method: Compositional matrix adjust. Identities = 20/54 (37%), Positives = 29/54 (53%) Query: 96 TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 T L+ M+ I+ L + S + + W+ VYVEV RN P LV IFF++ Sbjct: 23 TVRLSLMAMVLGLIVSVLGAVAKTSGIRPLRWLTDVYVEVIRNTPFLVQIFFIF 76 >gi|326388276|ref|ZP_08209879.1| octopine ABC transporter, permease protein [Novosphingobium nitrogenifigens DSM 19370] gi|326207442|gb|EGD58256.1| octopine ABC transporter, permease protein [Novosphingobium nitrogenifigens DSM 19370] Length = 241 Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 42/128 (32%), Positives = 73/128 (57%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P F++ +A+ +AA+ AE+ R GL+AVP+GQ+EAA+A G+ R ++LPQ + + Sbjct: 106 PAFLTGSLAIGLVSAAYQAEVFRGGLLAVPKGQVEAALAAGMGPWLRFRRIVLPQVLHHV 165 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 +PPL + + LK+S+L G A+L+ V T + M +YL+L+ + + Sbjct: 166 LPPLGNVWQFNLKDSALVAITGLAELMRVSLVAAGSTRRPFLFFAAAMVLYLALTSLSSA 225 Query: 384 FMNRLNAK 391 R+ A+ Sbjct: 226 VFRRIEAR 233 >gi|317053674|ref|YP_004118808.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea sp. At-9b] gi|316952779|gb|ADU72252.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea sp. At-9b] Length = 267 Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 42/122 (34%), Positives = 76/122 (62%), Gaps = 5/122 (4%) Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 ALS +A++ EI R+G+ +V RGQMEA ALG+++ +A RLV++PQ +R ++P + +Q+ Sbjct: 107 ALSLIASAYMGEIFRAGIQSVERGQMEACRALGMSYSRAMRLVVIPQGIRRVLPAIVNQF 166 Query: 332 LNLLKNSSLAVAVGF----ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387 + ++K+SSL +G +L VG TG ++L +F YL +++ + +N Sbjct: 167 IAIIKDSSLVYLLGLMTNQRELFRVGQDAAVLTGNLSPLMLAGLF-YLIITVPLTHMVNY 225 Query: 388 LN 389 ++ Sbjct: 226 VD 227 >gi|212697319|ref|ZP_03305447.1| hypothetical protein ANHYDRO_01887 [Anaerococcus hydrogenalis DSM 7454] gi|325848996|ref|ZP_08170506.1| putative arginine ABC transporter, permease protein ArtQ [Anaerococcus hydrogenalis ACS-025-V-Sch4] gi|212675768|gb|EEB35375.1| hypothetical protein ANHYDRO_01887 [Anaerococcus hydrogenalis DSM 7454] gi|325480640|gb|EGC83702.1| putative arginine ABC transporter, permease protein ArtQ [Anaerococcus hydrogenalis ACS-025-V-Sch4] Length = 235 Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 43/140 (30%), Positives = 84/140 (60%), Gaps = 1/140 (0%) Query: 254 FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313 +N I +T S F+ + + ++A+++E+ R G+ +V +G++EAA +LGL++ K +L Sbjct: 95 YNVILANTDSL-FLVAVVTFTINSSAYMSEVFRGGINSVDKGEIEAARSLGLSYEKTAKL 153 Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI 373 V++PQAM++ +P L ++ + L K +S++ +G DL G II++T A L I Sbjct: 154 VVIPQAMKNSLPALGNEVITLFKETSISGFIGLVDLTRGAGIIISRTFSAAIPYLAAALI 213 Query: 374 YLSLSIMIALFMNRLNAKIA 393 YL + +++ +L ++A Sbjct: 214 YLLVVLLLEKIFKKLEERMA 233 >gi|311279132|ref|YP_003941363.1| polar amino acid ABC transporter, inner membrane subunit [Enterobacter cloacae SCF1] gi|308748327|gb|ADO48079.1| polar amino acid ABC transporter, inner membrane subunit [Enterobacter cloacae SCF1] Length = 222 Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 47/186 (25%), Positives = 97/186 (52%), Gaps = 10/186 (5%) Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG-QFNFIGGSTVSPEFMSLYIA 272 + LP+ +++ F I LIA + +++ P G + + I + I Sbjct: 44 RMSPVLPVRWLARFYISIFRGTPLIAQLFMIYYGLPQFGIELDPIPAAM---------IG 94 Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 LS TAA+ +E +R+ + ++ +GQ EAA ++G+T + R +LPQA R +PPL++ ++ Sbjct: 95 LSLNTAAYTSETLRAAISSIDKGQWEAAASIGMTPWQTLRRAILPQAARVALPPLSNSFI 154 Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 +L+K++SLA + +L I ++T + + L IY ++ +++ N ++ Sbjct: 155 SLVKDTSLAATIQVPELFRQAQLITSRTLEVFTMYLAASLIYWVMATVLSALQNYFENQL 214 Query: 393 ALKEKK 398 +E++ Sbjct: 215 NRQERE 220 >gi|330886120|gb|EGH20021.1| amino acid ABC transporter permease [Pseudomonas syringae pv. mori str. 301020] Length = 200 Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 39/122 (31%), Positives = 70/122 (57%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I S AA+ EI+R+ + +V RGQ EAA ++G+T + R +LPQA R+ +PPL + Sbjct: 72 IGFSLNMAAYACEILRAAISSVERGQWEAAASIGMTRWQTMRRAILPQAARTALPPLGNS 131 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 +++L+K+++LA + +L I +T + + L IY L+ ++ N+L A Sbjct: 132 FISLVKDTALAATIQVPELFRQAQLITARTFEIFTMYLAAALIYWILATALSHLQNKLEA 191 Query: 391 KI 392 ++ Sbjct: 192 RV 193 Score = 38.1 bits (87), Expect = 2.3, Method: Compositional matrix adjust. Identities = 18/32 (56%), Positives = 21/32 (65%) Query: 118 RLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 RLS KLV WI R+YV FR P LV +F +Y Sbjct: 23 RLSRLKLVNWIARIYVSFFRGTPLLVQLFVIY 54 >gi|301067874|ref|YP_003789897.1| amino acid ABC transporter/signal transduction system periplasmic protein [Lactobacillus casei str. Zhang] gi|300440281|gb|ADK20047.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Lactobacillus casei str. Zhang] Length = 487 Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 49/157 (31%), Positives = 80/157 (50%), Gaps = 26/157 (16%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 + LPL+ ++ F+ G+P+L+ GS V P F++ + L+ Sbjct: 333 RGLPLMVLALFIYTGVPSLI----------------------GSKV-PAFIAGIVTLTLN 369 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 A+ A V+ G+ AV GQMEAA +LGL KA R V+LPQ ++ +IP +Q++ LK Sbjct: 370 EGAYTAAFVKGGIQAVDPGQMEAARSLGLPFGKAMRKVILPQGIKIMIPSFINQFIITLK 429 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI 373 ++S+ +G +L G II + +E IW + Sbjct: 430 DTSILSIIGLLELTQTGKIIIARN---MEGFKIWTMV 463 >gi|289674586|ref|ZP_06495476.1| amino acid ABC transporter permease [Pseudomonas syringae pv. syringae FF5] gi|302186281|ref|ZP_07262954.1| amino acid ABC transporter permease [Pseudomonas syringae pv. syringae 642] gi|330938697|gb|EGH42255.1| amino acid ABC transporter permease [Pseudomonas syringae pv. pisi str. 1704B] gi|330951253|gb|EGH51513.1| amino acid ABC transporter permease [Pseudomonas syringae Cit 7] Length = 222 Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 39/122 (31%), Positives = 70/122 (57%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I S AA+ EI+R+ + +V RGQ EAA ++G+T + R +LPQA R+ +PPL + Sbjct: 94 IGFSLNMAAYACEILRAAISSVERGQWEAAASIGMTRWQTMRRAILPQAARTALPPLGNS 153 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 +++L+K+++LA + +L I +T + + L IY L+ ++ N+L A Sbjct: 154 FISLVKDTALAATIQVPELFRQAQLITARTFEIFTMYLAAALIYWILATALSHLQNKLEA 213 Query: 391 KI 392 ++ Sbjct: 214 RV 215 >gi|229016185|ref|ZP_04173137.1| Amino acid ABC transporter [Bacillus cereus AH1273] gi|229022421|ref|ZP_04178959.1| Amino acid ABC transporter [Bacillus cereus AH1272] gi|228738902|gb|EEL89360.1| Amino acid ABC transporter [Bacillus cereus AH1272] gi|228745139|gb|EEL95189.1| Amino acid ABC transporter [Bacillus cereus AH1273] Length = 225 Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 49/157 (31%), Positives = 92/157 (58%), Gaps = 14/157 (8%) Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244 T + + +F++GI+L+ T L+R + + + +Y+S +I G P LV + + + Sbjct: 26 TTIPLTLITFIIGIILATL-TALARISGSRILQWIARIYVS--IIRGTPLLVQL---FII 79 Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304 + P L V P + + I S A+ +EI+R+ ++++P+GQ EAA +G Sbjct: 80 FYGLPTLN-------IEVEP-YTAAIIGFSLNVGAYASEIIRASILSIPKGQWEAAYTIG 131 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341 +T+ +A + V+LPQA R IPPL++ +++L+K++SLA Sbjct: 132 MTYPQALKRVILPQATRVSIPPLSNTFISLVKDTSLA 168 Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust. Identities = 20/68 (29%), Positives = 34/68 (50%) Query: 82 DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141 +S+A + T L I I+ TL R+S ++++ WI R+YV + R P Sbjct: 13 QTSFAPMLKEAVFTTIPLTLITFIIGIILATLTALARISGSRILQWIARIYVSIIRGTPL 72 Query: 142 LVVIFFLY 149 LV +F ++ Sbjct: 73 LVQLFIIF 80 >gi|71738018|ref|YP_272644.1| cystine ABC transporter permease [Pseudomonas syringae pv. phaseolicola 1448A] gi|71558571|gb|AAZ37782.1| cystine ABC tranporter, permease protein, putative [Pseudomonas syringae pv. phaseolicola 1448A] gi|320322115|gb|EFW78211.1| cystine ABC transporter, permease protein, putative [Pseudomonas syringae pv. glycinea str. B076] Length = 222 Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 39/122 (31%), Positives = 70/122 (57%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I S AA+ EI+R+ + +V RGQ EAA ++G+T + R +LPQA R+ +PPL + Sbjct: 94 IGFSLNMAAYACEILRAAISSVERGQWEAAASIGMTRWQTMRRAILPQAARTALPPLGNS 153 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 +++L+K+++LA + +L I +T + + L IY L+ ++ N+L A Sbjct: 154 FISLVKDTALAATIQVPELFRQAQLITARTFEIFTMYLAAALIYWILATALSHLQNKLEA 213 Query: 391 KI 392 ++ Sbjct: 214 RV 215 Score = 38.5 bits (88), Expect = 2.0, Method: Compositional matrix adjust. Identities = 18/32 (56%), Positives = 21/32 (65%) Query: 118 RLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 RLS KLV WI R+YV FR P LV +F +Y Sbjct: 45 RLSRLKLVNWIARIYVSFFRGTPLLVQLFVIY 76 >gi|260771045|ref|ZP_05879973.1| amino acid ABC transporter permease protein [Vibrio furnissii CIP 102972] gi|260613934|gb|EEX39125.1| amino acid ABC transporter permease protein [Vibrio furnissii CIP 102972] gi|315178628|gb|ADT85542.1| amino acid ABC transporter, permease protein [Vibrio furnissii NCTC 11218] Length = 223 Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 53/169 (31%), Positives = 96/169 (56%), Gaps = 11/169 (6%) Query: 183 MDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY 242 + T ++ V+ ++LS+ + R F AL LYIS F G P LV + L Sbjct: 19 LSTTMEMAVWGMFFALILSVLLANI-RVFKVPVLNALSQLYISFFR--GTPLLVQMFL-- 73 Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302 L++ P + F + G F + I L+ + AA++AE +R+ +I + R QMEA+++ Sbjct: 74 -LYYGLPQI--FPLLIGIDA---FSAAVIGLTLHFAAYMAETIRAAIIGIDRSQMEASLS 127 Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 +G+T +A R ++LPQA R +P L + +++++K++SLA G A++++ Sbjct: 128 VGMTTGQAMRRIILPQASRVALPSLMNYFIDMIKSTSLAFTFGVAEIMA 176 >gi|237731334|ref|ZP_04561815.1| binding-protein-dependent transport system inner membrane component [Citrobacter sp. 30_2] gi|226906873|gb|EEH92791.1| binding-protein-dependent transport system inner membrane component [Citrobacter sp. 30_2] Length = 225 Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 54/160 (33%), Positives = 84/160 (52%), Gaps = 17/160 (10%) Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256 GIVL+ A R L+I I G+P LI + + + + P+L + Sbjct: 46 GIVLACCAWRFPGAVRNG-------LFIWAEFIRGIP---LIFVIFWMWYLLPMLTGSDL 95 Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316 G TV+ +AL+ +TAA + V +G+ A+P GQ EAAI G +A L+LL Sbjct: 96 PGAVTVT-------LALAWFTAASVMHSVYAGISALPGGQYEAAIVQGFRPEQALWLILL 148 Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356 PQ +R+++P LT ++ LLK++SLA V +L +V G + Sbjct: 149 PQVLRNVLPSLTGIFIGLLKDTSLAFIVNVPELTTVAGQV 188 >gi|154487061|ref|ZP_02028468.1| hypothetical protein BIFADO_00899 [Bifidobacterium adolescentis L2-32] gi|154084924|gb|EDN83969.1| hypothetical protein BIFADO_00899 [Bifidobacterium adolescentis L2-32] Length = 225 Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 70/215 (32%), Positives = 102/215 (47%), Gaps = 27/215 (12%) Query: 191 VFSFVLGIVLSLF------ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244 +FS +LG++L + + R + + K LPL I F++ G Sbjct: 29 LFSTILGVILVMMRISPIASLRTVSGAYVELFKNLPLTIIMVFMVLG------------- 75 Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYI-ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 Q F T + F L + LS YTAAF+ E +RSG+ VP GQ EAA AL Sbjct: 76 -----AYAQLKFSFSDTFATNFFWLAVTGLSLYTAAFVCESLRSGINTVPLGQAEAARAL 130 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS--VGGTIINQTG 361 GL +A ++LPQA R + PL + + LLKNS++A A A S + I Sbjct: 131 GLNFMQAATQIILPQAFRGSVAPLGNTLIALLKNSTVAAAASVATETSTMMSEMIEYHAD 190 Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 Q + I LI+ F Y+ L I I + L+ K+A++ Sbjct: 191 QIVLIFLIFAFGYVVLIIPIGMLTTYLSNKLAVRR 225 >gi|257481899|ref|ZP_05635940.1| cystine ABC tranporter, permease protein, putative [Pseudomonas syringae pv. tabaci ATCC 11528] gi|289624705|ref|ZP_06457659.1| cystine ABC tranporter, permease protein, putative [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289650261|ref|ZP_06481604.1| cystine ABC tranporter, permease protein, putative [Pseudomonas syringae pv. aesculi str. 2250] gi|298485134|ref|ZP_07003230.1| Putative transport system permease protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298160386|gb|EFI01411.1| Putative transport system permease protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|330865666|gb|EGH00375.1| amino acid ABC transporter permease [Pseudomonas syringae pv. aesculi str. 0893_23] gi|330984783|gb|EGH82886.1| amino acid ABC transporter permease [Pseudomonas syringae pv. lachrymans str. M301315] gi|331009532|gb|EGH89588.1| amino acid ABC transporter permease [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 222 Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 39/122 (31%), Positives = 70/122 (57%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I S AA+ EI+R+ + +V RGQ EAA ++G+T + R +LPQA R+ +PPL + Sbjct: 94 IGFSLNMAAYACEILRAAISSVERGQWEAAASIGMTRWQTMRRAILPQAARTALPPLGNS 153 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 +++L+K+++LA + +L I +T + + L IY L+ ++ N+L A Sbjct: 154 FISLVKDTALAATIQVPELFRQAQLITARTFEIFTMYLAAALIYWILATALSHLQNKLEA 213 Query: 391 KI 392 ++ Sbjct: 214 RV 215 Score = 38.5 bits (88), Expect = 2.1, Method: Compositional matrix adjust. Identities = 18/32 (56%), Positives = 21/32 (65%) Query: 118 RLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 RLS KLV WI R+YV FR P LV +F +Y Sbjct: 45 RLSRLKLVNWIARIYVSFFRGTPLLVQLFVIY 76 >gi|229074557|ref|ZP_04207586.1| Amino acid ABC transporter [Bacillus cereus Rock4-18] gi|229095491|ref|ZP_04226482.1| Amino acid ABC transporter [Bacillus cereus Rock3-29] gi|229101615|ref|ZP_04232338.1| Amino acid ABC transporter [Bacillus cereus Rock3-28] gi|229114443|ref|ZP_04243861.1| Amino acid ABC transporter [Bacillus cereus Rock1-3] gi|229159927|ref|ZP_04287934.1| Amino acid ABC transporter [Bacillus cereus R309803] gi|228623666|gb|EEK80485.1| Amino acid ABC transporter [Bacillus cereus R309803] gi|228669122|gb|EEL24546.1| Amino acid ABC transporter [Bacillus cereus Rock1-3] gi|228681857|gb|EEL36011.1| Amino acid ABC transporter [Bacillus cereus Rock3-28] gi|228688037|gb|EEL41924.1| Amino acid ABC transporter [Bacillus cereus Rock3-29] gi|228708677|gb|EEL60821.1| Amino acid ABC transporter [Bacillus cereus Rock4-18] Length = 207 Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 49/157 (31%), Positives = 92/157 (58%), Gaps = 14/157 (8%) Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244 T + + +F++GI+L+ T L+R + + + +Y+S +I G P LV + + + Sbjct: 8 TTIPLTLITFIIGIILATL-TALARISGSRILQWIARIYVS--IIRGTPLLVQL---FII 61 Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304 + P L V P + + I S A+ +EI+R+ ++++P+GQ EAA +G Sbjct: 62 FYGLPTLN-------IEVEP-YTAAVIGFSLNVGAYASEIIRASILSIPKGQWEAAYTIG 113 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341 +T+ +A + V+LPQA R IPPL++ +++L+K++SLA Sbjct: 114 MTYPQALKRVILPQATRVSIPPLSNTFISLVKDTSLA 150 Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust. Identities = 15/41 (36%), Positives = 26/41 (63%) Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 I+ TL R+S ++++ WI R+YV + R P LV +F ++ Sbjct: 22 ILATLTALARISGSRILQWIARIYVSIIRGTPLLVQLFIIF 62 >gi|158425754|ref|YP_001527046.1| amino acid ABC transporter permease protein [Azorhizobium caulinodans ORS 571] gi|158332643|dbj|BAF90128.1| amino acid ABC transporter permease protein [Azorhizobium caulinodans ORS 571] Length = 219 Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 58/188 (30%), Positives = 96/188 (51%), Gaps = 18/188 (9%) Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249 FV ++G+ + T SR +LYI LI G P L+ + L + F Sbjct: 28 FVGGGIVGLAILFLRTGRSRGLRRAA-----MLYIE--LIQGTPLLMQLFLSF---FGLS 77 Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309 +LG F+ P + + ++L+ +T+AF+AEI R + +VPRGQ EA+ +L +T+ + Sbjct: 78 LLG-FDV-------PPWFAAGLSLTLWTSAFLAEIWRGCVESVPRGQWEASASLAMTYFE 129 Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369 R V+LPQA+R +PP + ++K ++L +GF +L I N T Q + + Sbjct: 130 QMRHVVLPQALRIAVPPTVGFSVQVVKGTALTSIIGFVELSKASTMITNATFQPFVVYGL 189 Query: 370 WMFIYLSL 377 IY +L Sbjct: 190 AALIYFAL 197 >gi|331701148|ref|YP_004398107.1| polar amino acid ABC transporter inner membrane subunit [Lactobacillus buchneri NRRL B-30929] gi|329128491|gb|AEB73044.1| polar amino acid ABC transporter, inner membrane subunit [Lactobacillus buchneri NRRL B-30929] Length = 715 Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 48/159 (30%), Positives = 81/159 (50%), Gaps = 23/159 (14%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 + +PLL ++ F+ G+P+L G + P F++ + L+ Sbjct: 561 RGMPLLVLALFIYTGIPSLT----------------------GQKI-PAFVAGVVTLTFN 597 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 A+IA V+ G+ AV GQMEA+ +LGL KA R V+LPQ +R ++P +Q++ LK Sbjct: 598 EGAYIAAFVKGGIQAVDPGQMEASRSLGLPFGKAMRKVILPQGIRIMVPSFINQFIITLK 657 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375 ++S+ +G +L G II + + ++ I IYL Sbjct: 658 DTSILSIIGLLELTQTGKIIIARNLEGFKVWTIVAAIYL 696 >gi|258541040|ref|YP_003175539.1| glutamine ABC transporter substrate-binding protein [Lactobacillus rhamnosus Lc 705] gi|257152716|emb|CAR91688.1| ABC transporter, glutamine-binding periplasmic protein [Lactobacillus rhamnosus Lc 705] Length = 484 Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 49/157 (31%), Positives = 80/157 (50%), Gaps = 26/157 (16%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 + LPL+ ++ F+ G+P+L+ GS V P F++ + L+ Sbjct: 330 RGLPLMVLALFIYTGVPSLI----------------------GSKV-PAFIAGIVTLTLN 366 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 A+ A V+ G+ AV GQMEAA +LGL KA R V+LPQ ++ +IP +Q++ LK Sbjct: 367 EGAYTAAFVKGGIQAVDPGQMEAARSLGLPFGKAMRKVILPQGIKIMIPSFINQFIITLK 426 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI 373 ++S+ +G +L G II + +E IW + Sbjct: 427 DTSILSIIGLLELTQTGKIIIARN---MEGFKIWTMV 460 >gi|229551205|ref|ZP_04439930.1| glutamate ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus rhamnosus LMS2-1] gi|229315497|gb|EEN81470.1| glutamate ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus rhamnosus LMS2-1] Length = 488 Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 49/157 (31%), Positives = 80/157 (50%), Gaps = 26/157 (16%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 + LPL+ ++ F+ G+P+L+ GS V P F++ + L+ Sbjct: 334 RGLPLMVLALFIYTGVPSLI----------------------GSKV-PAFIAGIVTLTLN 370 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 A+ A V+ G+ AV GQMEAA +LGL KA R V+LPQ ++ +IP +Q++ LK Sbjct: 371 EGAYTAAFVKGGIQAVDPGQMEAARSLGLPFGKAMRKVILPQGIKIMIPSFINQFIITLK 430 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI 373 ++S+ +G +L G II + +E IW + Sbjct: 431 DTSILSIIGLLELTQTGKIIIARN---MEGFKIWTMV 464 >gi|116255278|ref|YP_771111.1| putative permease component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] gi|115259926|emb|CAK03020.1| putative permease component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] Length = 213 Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 45/133 (33%), Positives = 71/133 (53%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 ++++ I L+ + +A++ EI R + AVPRGQ EAA AL L + + V+LPQA+R + Sbjct: 81 SWVAVAIGLTLHASAYLGEIWRGSIEAVPRGQTEAAKALSLRYISRMKDVILPQALRISL 140 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 P + L+K +SLA VGF +L G I NQ Q + + I +Y + + + Sbjct: 141 PATIGFLVQLIKGTSLASIVGFTELTRAGNIISNQIFQPLTVFGIVGILYFLMCCPLTIL 200 Query: 385 MNRLNAKIALKEK 397 RL K A + Sbjct: 201 GARLERKFAASAR 213 >gi|56964695|ref|YP_176426.1| amino acid ABC transporter permease [Bacillus clausii KSM-K16] gi|56910938|dbj|BAD65465.1| amino acid ABC transporter permease [Bacillus clausii KSM-K16] Length = 221 Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 60/218 (27%), Positives = 106/218 (48%), Gaps = 14/218 (6%) Query: 182 TMDTNAKIFVFSFVL-GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240 + D N I F F+L G+ +LF +S G L L +S +P ++ I+ Sbjct: 3 SFDLNLAIESFPFILKGLQYTLFVAVISMAIALVFGFILALGRMSKQAYVRIPCMLFIS- 61 Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEF-------MSLYIALSCYTAAFIAEIVRSGLIAVP 293 F++ V PEF + + S T+A++AE+ RS L AV Sbjct: 62 -----FNRGVPILLLLFLLYAALPEFGFQLSAVAAAIVGFSLNTSAYVAEVNRSALAAVD 116 Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353 RGQ EAA +LGL+ KA + ++LPQA+R +PPL++ +L+L+K +S+A + +L+ Sbjct: 117 RGQHEAAASLGLSKTKAMQHIILPQAVRIALPPLSNIFLSLVKMTSIASTIALPELMYQA 176 Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 + + ++++ IY + +++L L + Sbjct: 177 RIVGGREFNYFTVLIVAALIYWGICSLLSLLQRYLEKR 214 >gi|298487228|ref|ZP_07005277.1| Amino acid ABC transporter, permease protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298158252|gb|EFH99323.1| Amino acid ABC transporter, permease protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 220 Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 42/129 (32%), Positives = 72/129 (55%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + I L+ + + ++EIVR L A+P GQ+EA A+GL ++ R VLLPQAMR I+P Sbjct: 91 FQAGAIGLTLFCGSHVSEIVRGALQAIPAGQLEAGKAIGLRFNQSLRYVLLPQAMRQILP 150 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 + ++K S+L +G A+L+ +I +T +E L F++ ++ I L Sbjct: 151 TWVNSSTEIVKASTLLSVIGVAELLLSTQQVIARTFMTLEFYLFAGFLFFLINYAIELLG 210 Query: 386 NRLNAKIAL 394 ++ ++ L Sbjct: 211 RQIEKRVVL 219 >gi|260598413|ref|YP_003210984.1| amino acid ABC transporter permease [Cronobacter turicensis z3032] gi|260217590|emb|CBA31845.1| Inner membrane amino-acid ABC transporter permease protein yecS [Cronobacter turicensis z3032] Length = 231 Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 56/207 (27%), Positives = 106/207 (51%), Gaps = 18/207 (8%) Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251 F VLG +L++ RLS + P+ +++ F I LIA + +++ P Sbjct: 41 FGLVLGFLLAMM--RLSPFW--------PVSWLARFYISVFRGTPLIAQLFMIYYGLP-- 88 Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311 QF G + P + I LS TAA+ +E +R+ + ++ +GQ EAA ++G+T + Sbjct: 89 -QF----GIELDP-IPAAMIGLSLNTAAYTSETLRAAISSIDKGQWEAAASIGMTPWQTL 142 Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371 R +LPQA R +PPL + +++L+K++SLA + +L I ++T + + L Sbjct: 143 RRAILPQAARVALPPLGNSFISLVKDTSLAATIQVPELFRQAQLITSRTLEVFTMYLAAS 202 Query: 372 FIYLSLSIMIALFMNRLNAKIALKEKK 398 IY ++ +++ N ++ +E+ Sbjct: 203 LIYWVMATVLSALQNHFENQLNRQERD 229 Score = 41.6 bits (96), Expect = 0.21, Method: Compositional matrix adjust. Identities = 31/97 (31%), Positives = 47/97 (48%), Gaps = 8/97 (8%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G V T L+ GM ++G L+ RLS V+W+ R Y+ VFR P + +F + Sbjct: 24 LLKGAVFTLQLSIGGMFFGLVLGFLLAMMRLSPFWPVSWLARFYISVFRGTPLIAQLFMI 83 Query: 149 YKSV----LSVLPIPDHSIVLPFGMFLNNRGLSFPTL 181 Y + + + PIP I G+ LN + TL Sbjct: 84 YYGLPQFGIELDPIPAAMI----GLSLNTAAYTSETL 116 >gi|229010279|ref|ZP_04167488.1| Amino acid ABC transporter [Bacillus mycoides DSM 2048] gi|229131789|ref|ZP_04260663.1| Amino acid ABC transporter [Bacillus cereus BDRD-ST196] gi|229165791|ref|ZP_04293559.1| Amino acid ABC transporter [Bacillus cereus AH621] gi|228617792|gb|EEK74849.1| Amino acid ABC transporter [Bacillus cereus AH621] gi|228651683|gb|EEL07646.1| Amino acid ABC transporter [Bacillus cereus BDRD-ST196] gi|228750974|gb|EEM00791.1| Amino acid ABC transporter [Bacillus mycoides DSM 2048] Length = 207 Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 49/157 (31%), Positives = 92/157 (58%), Gaps = 14/157 (8%) Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244 T + + +F++GI+L+ T L+R + + + +Y+S +I G P LV + + + Sbjct: 8 TTIPLTLITFIIGIILATL-TALARISGSRILQWIARIYVS--IIRGTPLLVQL---FII 61 Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304 + P L V P + + I S A+ +EI+R+ ++++P+GQ EAA +G Sbjct: 62 FYGLPTLN-------IEVEP-YTAAVIGFSLNVGAYASEIIRASILSIPKGQWEAAYTIG 113 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341 +T+ +A + V+LPQA R IPPL++ +++L+K++SLA Sbjct: 114 MTYPQALKRVILPQATRVSIPPLSNTFISLVKDTSLA 150 Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust. Identities = 15/41 (36%), Positives = 26/41 (63%) Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 I+ TL R+S ++++ WI R+YV + R P LV +F ++ Sbjct: 22 ILATLTALARISGSRILQWIARIYVSIIRGTPLLVQLFIIF 62 >gi|111020458|ref|YP_703430.1| amino acid ABC transporter permease [Rhodococcus jostii RHA1] gi|110819988|gb|ABG95272.1| probable ABC amino acid transporter, permease component [Rhodococcus jostii RHA1] Length = 603 Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 41/117 (35%), Positives = 76/117 (64%), Gaps = 5/117 (4%) Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339 +I EI RSG+ +V GQ+EA+ ALG ++RK+ LV++PQ +R ++P L +Q+++L+K+SS Sbjct: 465 YIGEIFRSGIQSVEPGQLEASRALGFSYRKSMTLVVVPQGVRRVLPALMNQFISLIKDSS 524 Query: 340 ----LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 L + V +L +VG + QTG ++ +F YL+++I + +N ++ ++ Sbjct: 525 LIYFLGLLVSQRELFAVGRDLNAQTGNLSPLVAAGLF-YLAMTIPLTHLVNYIDNRL 580 Score = 40.8 bits (94), Expect = 0.34, Method: Compositional matrix adjust. Identities = 19/58 (32%), Positives = 32/58 (55%) Query: 91 VGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 G NT LA + I T++G L+ +S + + W R+Y +VFR +P +V+I + Sbjct: 377 TGLPNTLILALASGIVGTVLGMLLAMAGISRTRWLRWPARIYTDVFRGLPAVVIILIV 434 >gi|325848662|ref|ZP_08170240.1| ABC transporter, permease protein [Anaerococcus hydrogenalis ACS-025-V-Sch4] gi|325480664|gb|EGC83724.1| ABC transporter, permease protein [Anaerococcus hydrogenalis ACS-025-V-Sch4] Length = 529 Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 43/129 (33%), Positives = 74/129 (57%), Gaps = 4/129 (3%) Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326 ++ +I +S T A++AE+VR G+ +V GQ EA ALG+TH + V++PQ ++SI+P Sbjct: 388 LAAFIIVSINTGAYLAEVVRGGINSVDEGQFEACKALGMTHSQTMFNVVIPQTIKSILPA 447 Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI----MIA 382 + ++++ +K++S+ + +L V +I T Q + LI IY L+ +I Sbjct: 448 IANEFVVNIKDTSVLNVISVTELFFVSKSIAGSTYQIFQTYLITAIIYFILTFVTTRIIL 507 Query: 383 LFMNRLNAK 391 L RLN K Sbjct: 508 LLERRLNNK 516 >gi|302388264|ref|YP_003824086.1| polar amino acid ABC transporter, inner membrane subunit [Clostridium saccharolyticum WM1] gi|302198892|gb|ADL06463.1| polar amino acid ABC transporter, inner membrane subunit [Clostridium saccharolyticum WM1] Length = 244 Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 34/87 (39%), Positives = 59/87 (67%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P+F+ I + Y A+I+E++R+G+ A+P+GQ EAA + G ++ + ++LPQ ++ I Sbjct: 97 PKFVLGVIGVGVYHGAYISEVIRTGIEAIPKGQSEAASSQGFSYLETMYHIILPQTIKII 156 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLV 350 +PPL +Q LNL+KN+S+ V DL+ Sbjct: 157 MPPLANQALNLVKNTSILAMVAGMDLM 183 >gi|239630723|ref|ZP_04673754.1| ABC-type amino acid transport/signal transduction system [Lactobacillus paracasei subsp. paracasei 8700:2] gi|239527006|gb|EEQ66007.1| ABC-type amino acid transport/signal transduction system [Lactobacillus paracasei subsp. paracasei 8700:2] Length = 484 Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 49/157 (31%), Positives = 80/157 (50%), Gaps = 26/157 (16%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 + LPL+ ++ F+ G+P+L+ GS V P F++ + L+ Sbjct: 330 RGLPLMVLALFIYTGVPSLI----------------------GSKV-PAFIAGIVTLTLN 366 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 A+ A V+ G+ AV GQMEAA +LGL KA R V+LPQ ++ +IP +Q++ LK Sbjct: 367 EGAYTAAFVKGGIQAVDPGQMEAARSLGLPFGKAMRKVILPQGIKIMIPSFINQFIITLK 426 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI 373 ++S+ +G +L G II + +E IW + Sbjct: 427 DTSILSIIGLLELTQTGKIIIARN---MEGFKIWTMV 460 >gi|116496267|ref|YP_808001.1| amino acid ABC transporter periplasmic protein [Lactobacillus casei ATCC 334] gi|116106417|gb|ABJ71559.1| amino acid ABC transporter substrate-binding protein, PAAT family / amino acid ABC transporter membrane protein, PAAT family [Lactobacillus casei ATCC 334] Length = 484 Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 49/157 (31%), Positives = 80/157 (50%), Gaps = 26/157 (16%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 + LPL+ ++ F+ G+P+L+ GS V P F++ + L+ Sbjct: 330 RGLPLMVLALFIYTGVPSLI----------------------GSKV-PAFIAGIVTLTLN 366 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 A+ A V+ G+ AV GQMEAA +LGL KA R V+LPQ ++ +IP +Q++ LK Sbjct: 367 EGAYTAAFVKGGIQAVDPGQMEAARSLGLPFGKAMRKVILPQGIKIMIPSFINQFIITLK 426 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI 373 ++S+ +G +L G II + +E IW + Sbjct: 427 DTSILSIIGLLELTQTGKIIIARN---MEGFKIWTMV 460 >gi|86147679|ref|ZP_01065987.1| arginine ABC transporter, permease protein [Vibrio sp. MED222] gi|218709552|ref|YP_002417173.1| arginine transporter permease subunit ArtQ [Vibrio splendidus LGP32] gi|85834460|gb|EAQ52610.1| arginine ABC transporter, permease protein [Vibrio sp. MED222] gi|218322571|emb|CAV18730.1| ABC transporter: transmembrane protein; Arginine uptake [Vibrio splendidus LGP32] Length = 228 Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 46/134 (34%), Positives = 78/134 (58%), Gaps = 1/134 (0%) Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321 VSP F+S +ALS A++ ++ +R L AV +GQ EAA ALG++ +A V+LPQA+R Sbjct: 87 VSP-FLSGVVALSLIFASYASQTIRGALKAVSKGQREAASALGISQSRAFFRVVLPQAVR 145 Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 +P LT+Q+L LLK+++L +G DL+ T +A IYL ++++ Sbjct: 146 HALPGLTNQWLVLLKDTALVSLIGVTDLLKQAQLTSAATHEAFTWYATAAAIYLVITLIT 205 Query: 382 ALFMNRLNAKIALK 395 + ++ K +++ Sbjct: 206 QRLVKVIDGKFSIQ 219 >gi|47092916|ref|ZP_00230698.1| amino acid ABC transporter, permease protein [Listeria monocytogenes str. 4b H7858] gi|47018742|gb|EAL09493.1| amino acid ABC transporter, permease protein [Listeria monocytogenes str. 4b H7858] Length = 221 Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 38/124 (30%), Positives = 76/124 (61%), Gaps = 1/124 (0%) Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327 +++IA AA+ AEI R G +++ GQ E+A LGLT+ + + ++LPQ ++ ++P + Sbjct: 94 AVFIAFILNYAAYFAEIFRGGFLSIENGQYESAKVLGLTYGQTLQKIVLPQVVKRVLPAI 153 Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387 ++ +NL+K+SSL +G DL+ G +++ I ++L+ IYL+L+ ++ + + Sbjct: 154 GNEVINLVKDSSLVYILGIGDLLRAGKIAMSRDVTLIPLVLVAA-IYLALTAILTILFKQ 212 Query: 388 LNAK 391 L + Sbjct: 213 LEKR 216 >gi|328466492|gb|EGF37635.1| hypothetical protein LM1816_07287 [Listeria monocytogenes 1816] Length = 213 Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 38/124 (30%), Positives = 76/124 (61%), Gaps = 1/124 (0%) Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327 +++IA AA+ AEI R G +++ GQ E+A LGLT+ + + ++LPQ ++ ++P + Sbjct: 86 AVFIAFILNYAAYFAEIFRGGFLSIENGQYESAKVLGLTYGQTLQKIVLPQVVKRVLPAI 145 Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387 ++ +NL+K+SSL +G DL+ G +++ I ++L+ IYL+L+ ++ + + Sbjct: 146 GNEVINLVKDSSLVYILGIGDLLRAGKIAMSRDVTLIPLVLVAA-IYLALTAILTILFKQ 204 Query: 388 LNAK 391 L + Sbjct: 205 LEKR 208 >gi|168177791|ref|ZP_02612455.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Clostridium botulinum NCTC 2916] gi|226947681|ref|YP_002802772.1| amino acid ABC transporter permease [Clostridium botulinum A2 str. Kyoto] gi|182671578|gb|EDT83552.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Clostridium botulinum NCTC 2916] gi|226841874|gb|ACO84540.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Clostridium botulinum A2 str. Kyoto] Length = 211 Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 37/116 (31%), Positives = 69/116 (59%), Gaps = 1/116 (0%) Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 A++AE R+G+ ++ +GQ+EAA LG T+ + +++PQA+R++IPP+ ++ +NL+K+ Sbjct: 96 GAYLAETFRAGIESIDKGQVEAAKVLGFTYNQTMFKIIVPQAIRNVIPPICNESINLIKD 155 Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393 S+L A+G D++ ++ + I I IYL ++ + L L K A Sbjct: 156 SALVAAIGIGDILRAAKEVVTR-DFTITPFFIAAAIYLLITAFLVLIFRTLEKKYA 210 >gi|108799999|ref|YP_640196.1| amino acid ABC transporter permease [Mycobacterium sp. MCS] gi|119869124|ref|YP_939076.1| polar amino acid ABC transporter, inner membrane subunit [Mycobacterium sp. KMS] gi|108770418|gb|ABG09140.1| amino acid ABC transporter membrane protein, PAAT family [Mycobacterium sp. MCS] gi|119695213|gb|ABL92286.1| amino acid ABC transporter membrane protein, PAAT family [Mycobacterium sp. KMS] Length = 307 Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 41/109 (37%), Positives = 67/109 (61%), Gaps = 1/109 (0%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I L AA++AEI+R+G+ +VP GQ EA+ ALG++ R +LPQAMR IIPP ++ Sbjct: 159 IGLGLNEAAYMAEIIRAGISSVPEGQSEASTALGMSWTMTMRRTVLPQAMRVIIPPTGNE 218 Query: 331 YLNLLKNSSLAVAVGFA-DLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378 +++LK +SL AV ++ +L I Q I ++++ YL+++ Sbjct: 219 IISMLKTTSLVTAVPYSMELYGRARDIAGVIFQPIPLLMVAATWYLAIT 267 >gi|318076786|ref|ZP_07984118.1| transporter transmembrane component [Streptomyces sp. SA3_actF] Length = 389 Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 46/129 (35%), Positives = 74/129 (57%), Gaps = 4/129 (3%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I LS AA+ AE+VR+GL++V +GQ EAA ALGL R ++LPQA+R+I+P +Q Sbjct: 234 IGLSLNEAAYAAEVVRAGLLSVDQGQHEAAAALGLPRRFQFLRIVLPQALRAIVPGYVNQ 293 Query: 331 YLNLLKNSSLAVAVGFADLV----SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386 + L+K++SL V DL S+G T + + +W + SL + ++ Sbjct: 294 LIGLVKSTSLVFYVSLLDLFGSVQSLGSTYPGDIVPLLLVATVWYVLLTSLVSIAQFYVE 353 Query: 387 RLNAKIALK 395 R +++ AL+ Sbjct: 354 RRSSRGALR 362 >gi|239815920|ref|YP_002944830.1| polar amino acid ABC transporter inner membrane subunit [Variovorax paradoxus S110] gi|239802497|gb|ACS19564.1| polar amino acid ABC transporter, inner membrane subunit [Variovorax paradoxus S110] Length = 352 Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 36/80 (45%), Positives = 52/80 (65%) Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 L+ + AA++AEI+R GL AVPRGQ E A+ALG R ++LPQA+R ++P LT+ Sbjct: 223 GLTLFVAAYLAEIIRGGLQAVPRGQTEVAMALGFGRWPVQRDIVLPQALRLVVPALTNSV 282 Query: 332 LNLLKNSSLAVAVGFADLVS 351 + LK++SL VG +L Sbjct: 283 VGTLKDTSLVTVVGLFELTG 302 >gi|146306126|ref|YP_001186591.1| polar amino acid ABC transporter, inner membrane subunit [Pseudomonas mendocina ymp] gi|145574327|gb|ABP83859.1| L-ornithine ABC transporter membrane protein / L-arginine ABC transporter membrane protein [Pseudomonas mendocina ymp] Length = 231 Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 53/161 (32%), Positives = 83/161 (51%), Gaps = 10/161 (6%) Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL----YIALSCYTA 278 ++ T++I G P LV + L Y L QF+ I S + P F S +A + T+ Sbjct: 55 WLYTYVIRGTPMLVQLFLLYY------GLAQFDVIRDSFMWPYFSSATFCACLAFAINTS 108 Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338 A+ AEI+ L A P G++EAA A+G++ + R +LLP AMR +P +++ + +L + Sbjct: 109 AYTAEILAGSLKATPPGEIEAARAMGMSRAQLYRRILLPSAMRRALPQYSNEVIMMLHTT 168 Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379 SLA V DL TI +Q E + YL L++ Sbjct: 169 SLASLVTLIDLTGAARTISSQYYMPFEAFITAGLFYLVLTV 209 >gi|322390822|ref|ZP_08064332.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus parasanguinis ATCC 903] gi|321142492|gb|EFX37960.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus parasanguinis ATCC 903] Length = 228 Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 59/209 (28%), Positives = 107/209 (51%), Gaps = 15/209 (7%) Query: 195 VLGIVLSLFAT---RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL------H 245 V+ I+LS F L + + K ++ ++Y++ I P ++LI Y L Sbjct: 25 VVSILLSFFPALFLALGQIYKVKGVRSFSVIYLA--FIRATPPILLILFFYSLFPSLLNS 82 Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305 F K + FN ++P + + +I S T +AEI+RS ++ V +GQ+EAA A+GL Sbjct: 83 FFKSIGSHFNVF---EINPIYYA-FIIFSLMTTGSLAEILRSAILTVDKGQLEAAQAIGL 138 Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365 T+R+A ++ PQA+R+ +P L + +NL+K +SL + D+ ++ + Q E Sbjct: 139 TNRQAYIRIVFPQALRAALPNLCNLVINLVKGTSLVFVMTIKDITAIAKVEASYGYQYFE 198 Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIAL 394 L+ +Y+ + +I N L ++ L Sbjct: 199 SYLVIFILYIVICGVIQWGFNLLEKRLTL 227 >gi|227532737|ref|ZP_03962786.1| glutamate ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|227189571|gb|EEI69638.1| glutamate ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus paracasei subsp. paracasei ATCC 25302] Length = 496 Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 49/157 (31%), Positives = 80/157 (50%), Gaps = 26/157 (16%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 + LPL+ ++ F+ G+P+L+ GS V P F++ + L+ Sbjct: 342 RGLPLMVLALFIYTGVPSLI----------------------GSKV-PAFIAGIVTLTLN 378 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 A+ A V+ G+ AV GQMEAA +LGL KA R V+LPQ ++ +IP +Q++ LK Sbjct: 379 EGAYTAAFVKGGIQAVDPGQMEAARSLGLPFGKAMRKVILPQGIKIMIPSFINQFIITLK 438 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI 373 ++S+ +G +L G II + +E IW + Sbjct: 439 DTSILSIIGLLELTQTGKIIIARN---MEGFKIWTMV 472 >gi|242374107|ref|ZP_04819681.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Staphylococcus epidermidis M23864:W1] gi|242348232|gb|EES39834.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Staphylococcus epidermidis M23864:W1] Length = 375 Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 32/80 (40%), Positives = 59/80 (73%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IAL ++A+IAEI+R+G+ AV +GQ EAA +LGL + + + V++PQA+++I+P L ++ Sbjct: 250 IALVINSSAYIAEIIRAGINAVDKGQTEAARSLGLNYSQTMKFVVMPQAIKNILPALGNE 309 Query: 331 YLNLLKNSSLAVAVGFADLV 350 ++ L+K SS+ +G +++ Sbjct: 310 FVTLIKESSIVSTIGVGEIM 329 Score = 41.6 bits (96), Expect = 0.20, Method: Compositional matrix adjust. Identities = 19/67 (28%), Positives = 38/67 (56%) Query: 83 SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142 + Y + + G +T ++ G+I +I+G L+ +LS K ++W+ +Y+E R P L Sbjct: 165 TKYGSFFIKGIKDTILISSIGVILGSILGALIALMKLSKFKPLSWLASIYIEFLRGTPML 224 Query: 143 VVIFFLY 149 V +F ++ Sbjct: 225 VQVFIVF 231 >gi|261406921|ref|YP_003243162.1| polar amino acid ABC transporter inner membrane subunit [Paenibacillus sp. Y412MC10] gi|261283384|gb|ACX65355.1| polar amino acid ABC transporter, inner membrane subunit [Paenibacillus sp. Y412MC10] Length = 236 Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 53/177 (29%), Positives = 92/177 (51%), Gaps = 15/177 (8%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 + P+L + FGLP LV AL Q+ + S+ P +I+ S Sbjct: 63 RGTPMLTHLLLIYFGLPVLV-DALSAQMGWGFK----------SSSIPMIWFAFISFSIT 111 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 A+++E++RSGL+AV RGQ+EAA ++G+T +A R ++ PQA+ +P L++ + +L Sbjct: 112 AGAYMSEVIRSGLLAVNRGQLEAAYSIGMTTWQALRRIVFPQALAVSLPNLSNSVIGMLH 171 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI----ALFMNRLN 389 S+LA V D+ + + + + E L I+ L+++I A+F R+N Sbjct: 172 GSTLAFTVSVVDINAQAQIVASTNWKFFESYLAAAAIFWGLTLLIERLTAIFERRIN 228 >gi|115375368|ref|ZP_01462631.1| glutamine ABC transporter substrate-binding protein [Stigmatella aurantiaca DW4/3-1] gi|115367652|gb|EAU66624.1| glutamine ABC transporter substrate-binding protein [Stigmatella aurantiaca DW4/3-1] Length = 435 Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 46/125 (36%), Positives = 72/125 (57%), Gaps = 5/125 (4%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IALS AA+IAEI R+ + ++ +GQMEAA ALG++H A R V+LPQ R +IPPL ++ Sbjct: 310 IALSLNAAAYIAEIFRAAIESIDKGQMEAARALGMSHELAMRRVILPQTFRRLIPPLVNE 369 Query: 331 YLNLLKNSSLAVAVGFADLV----SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386 L K++SL + + +++ + GT + A I ++ I +LS + Sbjct: 370 LAALSKDTSLVMVIALPEMLYETKQLAGTYLRPEVYAWAAI-GYLLIVAALSALAQRLER 428 Query: 387 RLNAK 391 RL A+ Sbjct: 429 RLEAR 433 >gi|325964014|ref|YP_004241920.1| amino acid ABC transporter membrane protein 2, PAAT family [Arthrobacter phenanthrenivorans Sphe3] gi|323470101|gb|ADX73786.1| amino acid ABC transporter membrane protein 2, PAAT family [Arthrobacter phenanthrenivorans Sphe3] Length = 279 Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 38/92 (41%), Positives = 62/92 (67%), Gaps = 1/92 (1%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G SP F+++ L Y +A AEI+R+G+ ++P+GQ EA +A+GLT K+ L+ LPQ Sbjct: 124 GFGTSP-FVAVVTGLVLYNSAVFAEIIRAGIQSLPKGQREAGLAIGLTSFKSRMLIELPQ 182 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 A+R ++P L +Q + LLK++SL V + +L+ Sbjct: 183 AIRRMMPSLVAQMVVLLKDTSLGYIVAYGELL 214 >gi|319945661|ref|ZP_08019913.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus australis ATCC 700641] gi|319748260|gb|EFW00502.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus australis ATCC 700641] Length = 228 Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 59/209 (28%), Positives = 107/209 (51%), Gaps = 15/209 (7%) Query: 195 VLGIVLSLFAT---RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL------H 245 V+ I+LS F L + + K ++ ++Y++ I P ++LI Y L Sbjct: 25 VVSILLSFFPALFLALGQIYKVKGVRSFSVVYLA--FIRATPPILLILFFYSLFPSLLNS 82 Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305 F K + FN ++P + + +I S T +AEI+RS ++ V +GQ+EAA A+GL Sbjct: 83 FFKSIGSHFNVF---EINPIYYA-FIIFSLMTTGSLAEILRSAILTVDKGQLEAAQAIGL 138 Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365 T+R+A ++ PQA+R+ +P L + +NL+K +SL + D+ ++ + Q E Sbjct: 139 TNRQAYIRIVFPQALRAALPNLCNLVINLVKGTSLVFVMTIKDITAIAKVEASYGYQYFE 198 Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIAL 394 L+ +Y+ + +I N L ++ L Sbjct: 199 SYLVIFILYIVICGVIQWGFNLLEKRLTL 227 >gi|308449227|ref|XP_003087895.1| hypothetical protein CRE_07965 [Caenorhabditis remanei] gi|308252035|gb|EFO95987.1| hypothetical protein CRE_07965 [Caenorhabditis remanei] Length = 762 Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 59/203 (29%), Positives = 103/203 (50%), Gaps = 17/203 (8%) Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249 F+ + VLG++ SR + + +Y++ F G P LV L +F P Sbjct: 575 FIIAMVLGLIFGFMKISTSRTL-----RGIAAVYVAVFR--GTPVLVWAFL---FYFGLP 624 Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309 Q + G+ F + L+ + A++ EIVR GL AV GQMEAA +LGL K Sbjct: 625 ---QLTGVTGNV----FWAGTATLALNSGAYLTEIVRGGLQAVDPGQMEAARSLGLGWGK 677 Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369 + + V++PQA++ P + +Q++ LK+SSL + +GFA+L+ I + E+++I Sbjct: 678 SMQRVVVPQAVKISTPAIINQFVITLKDSSLLLTIGFAELLYQAQQIYAANYRTTEMLII 737 Query: 370 WMFIYLSLSIMIALFMNRLNAKI 392 +Y + ++ N ++ K+ Sbjct: 738 VGIMYFVVITLLTCVANIVDRKV 760 >gi|199599468|ref|ZP_03212860.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Lactobacillus rhamnosus HN001] gi|199589640|gb|EDY97754.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Lactobacillus rhamnosus HN001] Length = 488 Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 49/157 (31%), Positives = 80/157 (50%), Gaps = 26/157 (16%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 + LPL+ ++ F+ G+P+L+ GS V P F++ + L+ Sbjct: 334 RGLPLMVLALFIYTGVPSLI----------------------GSKV-PAFIAGIVTLTLN 370 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 A+ A V+ G+ AV GQMEAA +LGL KA R V+LPQ ++ +IP +Q++ LK Sbjct: 371 EGAYTAAFVKGGIQAVDPGQMEAARSLGLPFGKAMRKVILPQGIKIMIPSFINQFIITLK 430 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI 373 ++S+ +G +L G II + +E IW + Sbjct: 431 DTSILSIIGLLELTQTGKIIIARN---MEGFKIWTMV 464 >gi|113952871|ref|YP_730397.1| polar amino acid ABC transporter permease [Synechococcus sp. CC9311] gi|113880222|gb|ABI45180.1| polar amino amino acid ABC transporter (PAAT) family, permease protein [Synechococcus sp. CC9311] Length = 342 Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 42/124 (33%), Positives = 73/124 (58%), Gaps = 3/124 (2%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +A + + AA++AE VR GL ++P Q EAA ALGL RL++LPQA+R +P LT+Q Sbjct: 212 MAFALFAAAYVAEDVRGGLQSIPPTQAEAAAALGLNASLTMRLIILPQALRIAVPALTNQ 271 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTII---NQTGQAIEIILIWMFIYLSLSIMIALFMNR 387 + L++N+SL +G +L+ + +++ + G+ +E + +Y L +AL R Sbjct: 272 AIGLMQNTSLMAILGLIELLGISRSLLANPDYIGRHLETYVWLAGVYWLLCSAMALLAKR 331 Query: 388 LNAK 391 + + Sbjct: 332 IERQ 335 >gi|296271505|ref|YP_003654137.1| polar amino acid ABC transporter inner membrane subunit [Thermobispora bispora DSM 43833] gi|296094292|gb|ADG90244.1| polar amino acid ABC transporter, inner membrane subunit [Thermobispora bispora DSM 43833] Length = 290 Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 57/164 (34%), Positives = 92/164 (56%), Gaps = 16/164 (9%) Query: 186 NAKIFVFS----FVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALK 241 N KIF+ + VLG+ ++L + S F +A+ +LY F G+PT++L+ Sbjct: 83 NIKIFLIAEPLILVLGLAVALVRSLRSPVFFPL--RAVAVLYTDIFR--GIPTILLV--- 135 Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301 Y + F P L + G+ P + + IAL A++AE+ RSG+ ++ Q AA Sbjct: 136 YLVGFGIPALQ----LQGAPTDPVTLGI-IALVLSYGAYVAEVFRSGIESIHPSQRAAAR 190 Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345 +LGLTH + R V+LPQA+R +IPPL + + +L K+S+L +G Sbjct: 191 SLGLTHGQTMRHVVLPQAIRRVIPPLLNDFASLQKDSALVAVLG 234 >gi|168184265|ref|ZP_02618929.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Clostridium botulinum Bf] gi|237794766|ref|YP_002862318.1| amino acid ABC transporter permease [Clostridium botulinum Ba4 str. 657] gi|182672656|gb|EDT84617.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Clostridium botulinum Bf] gi|229264093|gb|ACQ55126.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Clostridium botulinum Ba4 str. 657] Length = 219 Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 39/124 (31%), Positives = 72/124 (58%), Gaps = 3/124 (2%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I L+ AA+++EI+R+ +I++ RGQ EA +LG T + ++LPQA++ +PPL + Sbjct: 94 IGLALNGAAYMSEIIRAAIISIDRGQEEAGFSLGYTRLQNLCYIILPQAVKISVPPLVNG 153 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL---FMNR 387 + +LLK++SL + +L G I ++T + E+ L Y L+ +++ F+ + Sbjct: 154 FSSLLKDTSLVSVISITELTRSGNLIYSRTARPFEVYLTLGLFYFVLTYIVSTCSKFIEK 213 Query: 388 LNAK 391 N K Sbjct: 214 RNEK 217 >gi|327192279|gb|EGE59244.1| putative amino acid ABC transporter, permease protein [Rhizobium etli CNPAF512] Length = 219 Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 40/115 (34%), Positives = 65/115 (56%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P +++ +AL +TAAF+AEI R + +V GQ EA+ +LG+ + R V+LPQA+R Sbjct: 84 PAWLAAGMALILWTAAFLAEIWRGCVESVASGQWEASASLGMGRLQQMRYVILPQALRVA 143 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378 IPP + ++K ++L +GF +L G + N T Q + + IY +L Sbjct: 144 IPPTVGFSVQIIKGTALTSIIGFVELSKAGTVVTNATFQPFTVYGLVALIYFALC 198 >gi|187921591|ref|YP_001890623.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia phytofirmans PsJN] gi|187720029|gb|ACD21252.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia phytofirmans PsJN] Length = 225 Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 42/140 (30%), Positives = 76/140 (54%), Gaps = 2/140 (1%) Query: 254 FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313 FN G V +S +A S AAF EI+R+G+ ++PRGQ +AA+ALG+T + R Sbjct: 87 FNLPAG--VDVRLISAMVAYSLLEAAFFCEIIRAGIESLPRGQAQAALALGMTAGQTMRY 144 Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI 373 V+LPQA R+++P +Q + + +++SL + D I + G + ++L Sbjct: 145 VILPQAFRAMVPVALTQCIVIFQDTSLVYVIALGDFFRRVSAIGERDGTVVPMLLFAGVA 204 Query: 374 YLSLSIMIALFMNRLNAKIA 393 Y S++ + + + + ++A Sbjct: 205 YWSITTGLTVTVKVVRTRLA 224 >gi|45443739|ref|NP_995278.1| putative amino acid transport system permease [Yersinia pestis biovar Microtus str. 91001] gi|45438609|gb|AAS64155.1| putative amino acid transport system permease [Yersinia pestis biovar Microtus str. 91001] Length = 269 Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 53/216 (24%), Positives = 106/216 (49%), Gaps = 11/216 (5%) Query: 177 SFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV 236 +FP + A V S + G+ ++ T L G +L +P ++ Sbjct: 35 TFPDGPLGGAALTVVISIMAGVASAVLGTVLGVALAMSRGVWAGILAAVLGFFRAIPVIM 94 Query: 237 LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296 LI + +F P++ + PE ++ AL+ +A++A V++G++A+ GQ Sbjct: 95 LI---FWTYFLLPIVFGVDI-------PEITTVVCALALIASAYLAHAVKAGIMAIGAGQ 144 Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356 +A ++LG + ++LPQA+R ++P +Q+++L+K++SLA VG +L + + Sbjct: 145 WQAGLSLGFNRWQTLWFIVLPQALRMMVPSFINQWISLIKDTSLAYIVGVNELTFLATQV 204 Query: 357 INQTG-QAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 N++ +E+ L +Y L + + L N LN + Sbjct: 205 NNRSMVYPMEVFLFVALVYFVLCLALDLLANGLNRR 240 >gi|260102749|ref|ZP_05752986.1| glutamine ABC superfamily ATP binding cassette transporter, permease protein [Lactobacillus helveticus DSM 20075] gi|260083442|gb|EEW67562.1| glutamine ABC superfamily ATP binding cassette transporter, permease protein [Lactobacillus helveticus DSM 20075] gi|328462015|gb|EGF34199.1| glutamine ABC transporter membrane protein [Lactobacillus helveticus MTCC 5463] Length = 217 Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 62/206 (30%), Positives = 100/206 (48%), Gaps = 31/206 (15%) Query: 193 SFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPTLVLIALKYQLHF 246 SFV+G++L L ++ G + LPLL I F FGLP L Sbjct: 34 SFVVGLILGLIRYTKIKYVSAIVGFIIDIIRNLPLLLIIFFTYFGLPQL----------- 82 Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306 G +P S+ AL + A +AEIVRSG+ +V GQME A + G++ Sbjct: 83 ------------GIVTNPTTASI-AALVIFEGAMLAEIVRSGIGSVDPGQMEGARSNGMS 129 Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ-TGQAIE 365 + +A V++PQA+ +IP L +Q+++L+K++SLA + +L+ I +Q T I Sbjct: 130 YGQAMYHVVMPQALNHMIPALLAQFVSLVKDTSLATIIVLPELLYNAQIIYSQNTTYLIP 189 Query: 366 IILIWMFIYLSLSIMIALFMNRLNAK 391 + +I +Y + ++ N L K Sbjct: 190 MYVIIAIMYFVVCFCLSTIANYLQKK 215 >gi|229171632|ref|ZP_04299207.1| Amino acid ABC transporter [Bacillus cereus MM3] gi|228611778|gb|EEK69025.1| Amino acid ABC transporter [Bacillus cereus MM3] Length = 207 Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 49/157 (31%), Positives = 92/157 (58%), Gaps = 14/157 (8%) Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244 T + + +F++GI+L+ T L+R + + + +Y+S +I G P LV + + + Sbjct: 8 TTIPLTLITFIIGIILATL-TALARISGSRILQWIARIYVS--IIRGTPLLVQL---FII 61 Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304 + P L V P + + I S A+ +EI+R+ ++++P+GQ EAA +G Sbjct: 62 FYGLPTLN-------IEVEP-YTAAVIGFSLNVGAYASEIIRASILSIPKGQWEAAYTIG 113 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341 +T+ +A + V+LPQA R IPPL++ +++L+K++SLA Sbjct: 114 MTYPQALKRVILPQATRVSIPPLSNTFISLVKDTSLA 150 Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust. Identities = 15/41 (36%), Positives = 26/41 (63%) Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 I+ TL R+S ++++ WI R+YV + R P LV +F ++ Sbjct: 22 ILATLTALARISGSRILQWIARIYVSIIRGTPLLVQLFIIF 62 >gi|222106577|ref|YP_002547368.1| glutamine ABC transporter [Agrobacterium vitis S4] gi|221737756|gb|ACM38652.1| glutamine ABC transporter [Agrobacterium vitis S4] Length = 507 Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 59/182 (32%), Positives = 95/182 (52%), Gaps = 19/182 (10%) Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ-FNFIGGSTVSPEFMSLYI-ALSCYTAA 279 LY F GLP +V I L +GQ F I P L I ALS A Sbjct: 67 LYTDIF--RGLPAIVTILL----------IGQGFARIAREIWGPSPYPLGILALSLIAGA 114 Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339 +I EI RSG+ +V RGQ+EA AL +++ + RL+++PQ +R ++P L +Q++ +K+SS Sbjct: 115 YIGEIFRSGIQSVDRGQLEACRALSMSYGQGMRLIIVPQGVRRVLPALVNQFIGNVKDSS 174 Query: 340 LAVAVGF----ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395 L +G ++ VG TG ++L MF YL +++ + +N ++ ++ L Sbjct: 175 LVYFLGLLASEREIFRVGQDQAVVTGNLSPLLLAGMF-YLVITVPLTHLVNTIDTRLRLG 233 Query: 396 EK 397 +K Sbjct: 234 KK 235 >gi|212709680|ref|ZP_03317808.1| hypothetical protein PROVALCAL_00728 [Providencia alcalifaciens DSM 30120] gi|212687491|gb|EEB47019.1| hypothetical protein PROVALCAL_00728 [Providencia alcalifaciens DSM 30120] Length = 246 Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 46/147 (31%), Positives = 81/147 (55%), Gaps = 7/147 (4%) Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311 G+F++ +P F + IAL+ A++ ++ +R L AVP GQ EA +ALGL+ R Sbjct: 104 GEFDY------TPFFCGV-IALALLYASYASQTLRGALKAVPYGQWEAGLALGLSKRTIF 156 Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371 ++PQ R +P L +Q+L LLK+++L + DL+ TI+N+T + I Sbjct: 157 FRYIMPQMWRHALPGLGNQWLVLLKDTALVSLISVNDLMLQTKTIVNRTHEPFTWYAIVG 216 Query: 372 FIYLSLSIMIALFMNRLNAKIALKEKK 398 IYL+++++ L + R+ + E+ Sbjct: 217 LIYLAITLLSQLVLKRIELRTTRFERS 243 >gi|119946449|ref|YP_944129.1| ABC polar amino acid transporter inner membrane protein [Psychromonas ingrahamii 37] gi|119865053|gb|ABM04530.1| ABC polar amino acid transporter inner membrane protein [Psychromonas ingrahamii 37] Length = 359 Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 31/82 (37%), Positives = 59/82 (71%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I ++ + +A+IAE++R GL A+P+GQ EAA +LGL + + L++LPQA++ IP L Sbjct: 231 IGITLFQSAYIAEVIRGGLQAIPKGQYEAAESLGLGYWQGMLLIILPQALKISIPNLVGS 290 Query: 331 YLNLLKNSSLAVAVGFADLVSV 352 +++L K+++L + +G D++++ Sbjct: 291 FISLFKDTTLVLIIGLFDVLAM 312 >gi|288962581|ref|YP_003452876.1| polar amino acid transport system permease protein [Azospirillum sp. B510] gi|288914847|dbj|BAI76332.1| polar amino acid transport system permease protein [Azospirillum sp. B510] Length = 216 Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 42/127 (33%), Positives = 71/127 (55%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 + S + L+ +TAA++AEI R + AVP+GQ EA+ +L LT + R V+LPQA+R +P Sbjct: 86 WTSAAVGLTLFTAAYLAEIWRGCVEAVPKGQWEASASLALTFGEQMRHVILPQALRIAVP 145 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 P + ++K +++ +GF ++ G I N T Q + + IY +L ++L Sbjct: 146 PTVGFSVQVVKGTAVTSIIGFVEVTKAGTMITNATFQPFLVYGLVGLIYFALCYPLSLSA 205 Query: 386 NRLNAKI 392 L K+ Sbjct: 206 KALERKL 212 >gi|119946445|ref|YP_944125.1| ABC polar amino acid transporter inner membrane protein [Psychromonas ingrahamii 37] gi|119865049|gb|ABM04526.1| ABC polar amino acid transporter inner membrane protein [Psychromonas ingrahamii 37] Length = 359 Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 31/82 (37%), Positives = 59/82 (71%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I ++ + +A+IAE++R GL A+P+GQ EAA +LGL + + L++LPQA++ IP L Sbjct: 231 IGITLFQSAYIAEVIRGGLQAIPKGQYEAAESLGLGYWQGMLLIILPQALKISIPNLVGS 290 Query: 331 YLNLLKNSSLAVAVGFADLVSV 352 +++L K+++L + +G D++++ Sbjct: 291 FISLFKDTTLVLIIGLFDVLAM 312 >gi|323485584|ref|ZP_08090928.1| hypothetical protein HMPREF9474_02679 [Clostridium symbiosum WAL-14163] gi|323692932|ref|ZP_08107154.1| hypothetical protein HMPREF9475_02017 [Clostridium symbiosum WAL-14673] gi|323401102|gb|EGA93456.1| hypothetical protein HMPREF9474_02679 [Clostridium symbiosum WAL-14163] gi|323503015|gb|EGB18855.1| hypothetical protein HMPREF9475_02017 [Clostridium symbiosum WAL-14673] Length = 230 Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 58/206 (28%), Positives = 102/206 (49%), Gaps = 16/206 (7%) Query: 195 VLGIVLSLFATRLSRHFHEKTGKALPLLYISTF---LIFGLPTLVLIALKYQLHFDKPVL 251 +LGIV+ L + R +EKT K L +I +I G P +V + + Y + F Sbjct: 38 ILGIVIGLIVGVI-RSTYEKTHKLKILNFICNLYLTVIRGTPVVVQLMIIYYVIF----- 91 Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311 GS + +A + A++AEI RSG++++ GQ EA +LG + + Sbjct: 92 -------GSLRVDKVPVAVLAFGINSGAYVAEIFRSGIMSIDNGQFEAGRSLGFNYPQTM 144 Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371 +++PQA ++I+P L +++++LLK +S+A + DL G I + T A +L Sbjct: 145 WYIIMPQAFKNILPALCNEFISLLKETSVAGFIALQDLTKGGDIIRSITYSATMPLLAVA 204 Query: 372 FIYLSLSIMIALFMNRLNAKIALKEK 397 IYL + I+ + L ++ E+ Sbjct: 205 AIYLIIVIIFTQLIKCLERRLRQSER 230 >gi|229028650|ref|ZP_04184764.1| Amino acid ABC transporter [Bacillus cereus AH1271] gi|228732669|gb|EEL83537.1| Amino acid ABC transporter [Bacillus cereus AH1271] Length = 209 Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 49/157 (31%), Positives = 92/157 (58%), Gaps = 14/157 (8%) Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244 T + + +F++GI+L+ T L+R + + + +Y+S +I G P LV + + + Sbjct: 10 TTIPLTLITFIIGIILATL-TALARISGSRILQWIARIYVS--IIRGTPLLVQL---FII 63 Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304 + P L V P + + I S A+ +EI+R+ ++++P+GQ EAA +G Sbjct: 64 FYGLPTLN-------IEVEP-YTAAVIGFSLNVGAYASEIIRASILSIPKGQWEAAYTIG 115 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341 +T+ +A + V+LPQA R IPPL++ +++L+K++SLA Sbjct: 116 MTYPQALKRVILPQATRVSIPPLSNTFISLVKDTSLA 152 Score = 38.9 bits (89), Expect = 1.5, Method: Compositional matrix adjust. Identities = 15/41 (36%), Positives = 26/41 (63%) Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 I+ TL R+S ++++ WI R+YV + R P LV +F ++ Sbjct: 24 ILATLTALARISGSRILQWIARIYVSIIRGTPLLVQLFIIF 64 >gi|315151111|gb|EFT95127.1| ABC transporter, permease protein [Enterococcus faecalis TX0012] Length = 546 Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 56/199 (28%), Positives = 99/199 (49%), Gaps = 31/199 (15%) Query: 195 VLGIVLSLFATRLSRH-----FHEKTGKALPLLYISTFLIFGLPTLVL-------IALKY 242 LG+++ +F T F +K G + +YI F G P +V +AL + Sbjct: 337 TLGLLIGVFRTIPDSENPVARFFQKLGNLILSIYIEVFR--GTPMMVQAMVIFYGLALAF 394 Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302 + D+ V +L+I +S T A+++EIVR G+ AV +GQ EAA A Sbjct: 395 GISLDRTV----------------AALFI-VSVNTGAYMSEIVRGGIFAVDKGQFEAAQA 437 Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362 +G+TH + R V++PQ +R+I+P ++++ +K++++ +G ADL G Q Sbjct: 438 IGMTHGQTMRKVVIPQVLRNILPATGNEFVINIKDTAVLSVIGVADLFFQGNAASGANFQ 497 Query: 363 AIEIILIWMFIYLSLSIMI 381 + I +YL ++ +I Sbjct: 498 FFQTFTIVGIMYLVMTFVI 516 >gi|158426030|ref|YP_001527322.1| amino acid ABC transporter, permease protein [Azorhizobium caulinodans ORS 571] gi|158332919|dbj|BAF90404.1| amino acid ABC transporter, permease protein [Azorhizobium caulinodans ORS 571] Length = 217 Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 50/137 (36%), Positives = 74/137 (54%), Gaps = 2/137 (1%) Query: 255 NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLV 314 NF G S + P M+ I L+ AAF+ EI R + A+P+GQ EAA ALGL + + + Sbjct: 77 NFFGLS-IDP-LMAAAIGLTLNGAAFLGEIWRGCIQAIPKGQWEAATALGLHYTTRMKEI 134 Query: 315 LLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374 +LPQA + + P + L+K++SLA +GF +L G + N T + + I IY Sbjct: 135 ILPQAAKIAVAPTVGFLVLLVKSTSLASIIGFVELTRAGQIVNNATFRPFLVFGIVAAIY 194 Query: 375 LSLSIMIALFMNRLNAK 391 L ++LF RL K Sbjct: 195 FVLCWPLSLFSRRLEKK 211 >gi|330718492|ref|ZP_08313092.1| ABC-type amino acid transport system, permease component [Leuconostoc fallax KCTC 3537] Length = 220 Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 56/210 (26%), Positives = 103/210 (49%), Gaps = 31/210 (14%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPTLVLIALKYQL 244 V SFV+G +L + +F G + LPLL I F F LP ++ + Sbjct: 35 VLSFVIGSILGVIRYEKIPYFSRFVGLIIDIVRNLPLLLIIFFTYFALP-------RFGV 87 Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304 H S IA++ + + +AEI+R GL ++ GQ E A + G Sbjct: 88 HLSI-----------------LTSAIIAMTAFESMMVAEIIRGGLKSIDFGQTEGARSTG 130 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ-A 363 +++ + ++LPQA +++IPPL SQ+++L+K++SLA A+ +L+ + Q Sbjct: 131 MSNAQTMWHIILPQAYKTMIPPLISQFISLVKDTSLATAIVLPELMYRAQIVYGQDNTYM 190 Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIA 393 + I+L+ +Y ++ ++L ++K+A Sbjct: 191 VPILLLIAAMYFVVNYGLSLLAKWFDSKLA 220 >gi|317133175|ref|YP_004092489.1| polar amino acid ABC transporter, inner membrane subunit [Ethanoligenens harbinense YUAN-3] gi|315471154|gb|ADU27758.1| polar amino acid ABC transporter, inner membrane subunit [Ethanoligenens harbinense YUAN-3] Length = 228 Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 57/184 (30%), Positives = 99/184 (53%), Gaps = 25/184 (13%) Query: 217 KALPLLYISTFLIF-GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSC 275 + PL+ I F+IF GLP ++ I++ FD + F+S IA++ Sbjct: 61 RGTPLM-IQLFIIFYGLP-MIGISIPSLTFFDTDI-------------SRFISGMIAMAL 105 Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335 ++A++ EI RSG+ +V GQ+EA+ +LG + R ++LPQA+R+I+P L ++ + ++ Sbjct: 106 NSSAYVCEIFRSGIQSVDDGQVEASRSLGFNYSSTMRFIVLPQALRNILPALGNELVTVI 165 Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQA-----IEIILIWMFIYLSLSIMIALF---MNR 387 K SS+ +G +L+ TI+ T I LI+ I +LS ++ F M+R Sbjct: 166 KESSVISVIGVQELM-YNTTIVRSTTYKSFSPLIITALIYFVITFTLSKLLGKFEKHMSR 224 Query: 388 LNAK 391 NA+ Sbjct: 225 SNAR 228 >gi|262403073|ref|ZP_06079633.1| amino acid ABC transporter permease protein [Vibrio sp. RC586] gi|262350572|gb|EEY99705.1| amino acid ABC transporter permease protein [Vibrio sp. RC586] Length = 298 Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 43/134 (32%), Positives = 74/134 (55%) Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317 G + + +S + + ++A+IAEIVR+GL +P GQ EAA +LGL R V+ P Sbjct: 158 GPARLWENLLSGVLCIGLLSSAYIAEIVRAGLANIPLGQWEAADSLGLPTWVKYRYVIAP 217 Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377 Q + +I P L Q ++L+K++S+ + +L VG + N +G EI LI YL L Sbjct: 218 QVLTAITPALAGQTISLIKDTSIISLISIQELTFVGSEMANSSGLIFEIWLIVGAAYLVL 277 Query: 378 SIMIALFMNRLNAK 391 + +++ ++ + Sbjct: 278 CLTLSMLFKQVEKR 291 >gi|191639795|ref|YP_001988961.1| Glutamine-binding protein / Glutamine transport system permease protein [Lactobacillus casei BL23] gi|190714097|emb|CAQ68103.1| Glutamine-binding protein / Glutamine transport system permease protein [Lactobacillus casei BL23] Length = 488 Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 49/157 (31%), Positives = 80/157 (50%), Gaps = 26/157 (16%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 + LPL+ ++ F+ G+P+L+ GS V P F++ + L+ Sbjct: 334 RGLPLMVLALFIYNGVPSLI----------------------GSKV-PAFIAGIVTLTLN 370 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 A+ A V+ G+ AV GQMEAA +LGL KA R V+LPQ ++ +IP +Q++ LK Sbjct: 371 EGAYTAAFVKGGIQAVDPGQMEAARSLGLPFGKAMRKVILPQGIKIMIPSFINQFIITLK 430 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI 373 ++S+ +G +L G II + +E IW + Sbjct: 431 DTSILSIIGLLELTQTGKIIIARN---MEGFKIWTMV 464 >gi|91778421|ref|YP_553629.1| polar amino acid ABC transporter inner membrane protein [Burkholderia xenovorans LB400] gi|91691081|gb|ABE34279.1| amino acid ABC transporter membrane protein 1, PAAT family [Burkholderia xenovorans LB400] Length = 248 Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 52/163 (31%), Positives = 83/163 (50%), Gaps = 24/163 (14%) Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286 F+ FGLP+L +H D E + +A++ A+ EIVR Sbjct: 75 FVFFGLPSL-------GIHID-----------------EVQAAILAMTVNLGAYAIEIVR 110 Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346 +G+ ++ RGQ++AA ALGL R+ R V+LPQA+ ++ P L SQ L ++ S++ + Sbjct: 111 AGIDSISRGQVQAAQALGLHGRQVFRYVVLPQAIANVFPALLSQVLIVMLGSAVVSQISV 170 Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 DL I ++ ++ E LI YL LSI++ +NRL Sbjct: 171 PDLTYAANFIQSRNFRSFESYLIITATYLVLSIVLRQILNRLG 213 >gi|325678775|ref|ZP_08158373.1| putative arginine ABC transporter, permease protein ArtQ [Ruminococcus albus 8] gi|324109279|gb|EGC03497.1| putative arginine ABC transporter, permease protein ArtQ [Ruminococcus albus 8] Length = 226 Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 39/133 (29%), Positives = 77/133 (57%), Gaps = 3/133 (2%) Query: 262 VSPE--FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319 +SP+ F ++ I S AA+ AEI RSG+ AVP+GQ EA LG + + ++ PQ Sbjct: 91 ISPDYRFYAVIIGFSLNYAAYFAEIYRSGIQAVPKGQYEACEILGYSRSQRFFKIVFPQM 150 Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379 +++I+P +T++ + L+K++SLA A+ + ++ +V + + + + +F Y+ + Sbjct: 151 VKNILPSVTNEIITLVKDTSLAFAIAYTEMFTVAKQVAASQATILPLFVAGLFYYV-FNF 209 Query: 380 MIALFMNRLNAKI 392 ++A M + K+ Sbjct: 210 LVAFIMELVEKKM 222 >gi|259651117|dbj|BAI43279.1| amino acid ABC transporter permease component [Lactobacillus rhamnosus GG] Length = 487 Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 49/157 (31%), Positives = 80/157 (50%), Gaps = 26/157 (16%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 + LPL+ ++ F+ G+P+L+ GS V P F++ + L+ Sbjct: 333 RGLPLMVLALFIYTGVPSLI----------------------GSKV-PAFIAGIVTLTLN 369 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 A+ A V+ G+ AV GQMEAA +LGL KA R V+LPQ ++ +IP +Q++ LK Sbjct: 370 EGAYTAAFVKGGIQAVDPGQMEAARSLGLPFGKAMRKVILPQGIKIMIPSFINQFIITLK 429 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI 373 ++S+ +G +L G II + +E IW + Sbjct: 430 DTSILSIIGLLELTQTGKIIIARN---MEGFKIWTMV 463 >gi|258509857|ref|YP_003172608.1| ABC transporter glutamine-binding periplasmic protein [Lactobacillus rhamnosus GG] gi|257149784|emb|CAR88757.1| ABC transporter, glutamine-binding periplasmic protein [Lactobacillus rhamnosus GG] Length = 484 Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 49/157 (31%), Positives = 80/157 (50%), Gaps = 26/157 (16%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 + LPL+ ++ F+ G+P+L+ GS V P F++ + L+ Sbjct: 330 RGLPLMVLALFIYTGVPSLI----------------------GSKV-PAFIAGIVTLTLN 366 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 A+ A V+ G+ AV GQMEAA +LGL KA R V+LPQ ++ +IP +Q++ LK Sbjct: 367 EGAYTAAFVKGGIQAVDPGQMEAARSLGLPFGKAMRKVILPQGIKIMIPSFINQFIITLK 426 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI 373 ++S+ +G +L G II + +E IW + Sbjct: 427 DTSILSIIGLLELTQTGKIIIARN---MEGFKIWTMV 460 >gi|170016959|ref|YP_001727878.1| amino acid ABC transporter periplasmic protein [Leuconostoc citreum KM20] gi|169803816|gb|ACA82434.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Leuconostoc citreum KM20] Length = 491 Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 60/203 (29%), Positives = 107/203 (52%), Gaps = 18/203 (8%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 V +LG V +LF +LS +F K A+ +Y+ + G P LV + + F V Sbjct: 303 VIGSILGTVFALF--KLSPNFLLK---AVGNIYVE--YVRGTPLLVQA---FMVFFGTQV 352 Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 +G N F + +A+ +AA++AEI+RSG+ +V GQ EAA +LGL+ K Sbjct: 353 IG-LNL-------SSFAAGALAMGLNSAAYVAEIIRSGINSVNYGQTEAARSLGLSKGKT 404 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370 R ++LPQA+++I+P L ++++ ++K S+ +G +L+ G + + + +LI Sbjct: 405 MRFIILPQAIKNILPALGNEFVTVIKEGSVVSVIGVGELMFQTGVVQGASFKPFFPLLIT 464 Query: 371 MFIYLSLSIMIALFMNRLNAKIA 393 IY L+ I+ + ++A Sbjct: 465 SMIYFVLTFGISRALGYAEKRMA 487 >gi|330875464|gb|EGH09613.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 324 Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 67/199 (33%), Positives = 100/199 (50%), Gaps = 15/199 (7%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF--DK 248 VFS VLG L+L RLSR AL YI F +P L+++ + Y + D Sbjct: 96 VFSIVLGTALAL--ARLSR---SPLLAALAWGYIWFFR--SMPALLVLIILYNFAYLYDH 148 Query: 249 PVLG----QFNFIGGSTVS--PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302 VL F STV +F + LS AA+ AEI+R GLI V GQ EAA A Sbjct: 149 IVLAVPFTDLVFAEWSTVDVLSQFTVAVLGLSLMQAAYTAEIIRGGLIGVDAGQHEAAAA 208 Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362 LGL + ++LPQA+RSI+P ++ + L+K +S+ + +L I N+T Sbjct: 209 LGLPASRRVFRIILPQALRSILPSGFNEIIGLVKGTSIVYVLALPELFYTVQVIYNRTQA 268 Query: 363 AIEIILIWMFIYLSLSIMI 381 I ++++ YL ++ ++ Sbjct: 269 VIPLLIVATVWYLIITTVL 287 >gi|317057053|ref|YP_004105520.1| polar amino acid ABC transporter inner membrane subunit [Ruminococcus albus 7] gi|315449322|gb|ADU22886.1| polar amino acid ABC transporter, inner membrane subunit [Ruminococcus albus 7] Length = 227 Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 42/143 (29%), Positives = 77/143 (53%), Gaps = 2/143 (1%) Query: 251 LGQFNFIGGSTVSP-EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309 G + G T S F ++ I S AA+ AEI R+G+ AVP+GQ EA LG + + Sbjct: 82 FGPYYLFGMRTSSEYRFYAVIIGFSLNYAAYFAEIYRAGIQAVPKGQHEACEILGYSKSQ 141 Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369 ++ PQ M++IIP +T++ + L+K++SLA A+ + ++ +V + + + + Sbjct: 142 KFFKIVFPQMMKNIIPAITNEVITLVKDTSLAFAIAYTEMFTVAKQVAAAQSTIMPLFVA 201 Query: 370 WMFIYLSLSIMIALFMNRLNAKI 392 +F Y+ + +A M + K+ Sbjct: 202 GLFYYV-FNFFVAFVMEFIEKKM 223 >gi|327383907|gb|AEA55383.1| hypothetical protein LC2W_3058 [Lactobacillus casei LC2W] gi|327387088|gb|AEA58562.1| hypothetical protein LCBD_3073 [Lactobacillus casei BD-II] Length = 487 Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 49/157 (31%), Positives = 80/157 (50%), Gaps = 26/157 (16%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 + LPL+ ++ F+ G+P+L+ GS V P F++ + L+ Sbjct: 333 RGLPLMVLALFIYNGVPSLI----------------------GSKV-PAFIAGIVTLTLN 369 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 A+ A V+ G+ AV GQMEAA +LGL KA R V+LPQ ++ +IP +Q++ LK Sbjct: 370 EGAYTAAFVKGGIQAVDPGQMEAARSLGLPFGKAMRKVILPQGIKIMIPSFINQFIITLK 429 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI 373 ++S+ +G +L G II + +E IW + Sbjct: 430 DTSILSIIGLLELTQTGKIIIARN---MEGFKIWTMV 463 >gi|194016403|ref|ZP_03055017.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Bacillus pumilus ATCC 7061] gi|194011876|gb|EDW21444.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Bacillus pumilus ATCC 7061] Length = 225 Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 37/92 (40%), Positives = 58/92 (63%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P+F + IAL+ + A+IAEI R + ++ +GQ EA +LG+ R ++LPQAMR Sbjct: 92 PDFWAASIALAFHNGAYIAEIFRGAIQSIDQGQKEAGRSLGMGRFLTMRRIILPQAMRRA 151 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355 +PPL +Q++ LK+SSLA + +L +V T Sbjct: 152 LPPLGNQFIIGLKDSSLAAFISVNELFNVATT 183 >gi|270263685|ref|ZP_06191954.1| transporter [Serratia odorifera 4Rx13] gi|270042569|gb|EFA15664.1| transporter [Serratia odorifera 4Rx13] Length = 295 Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 45/136 (33%), Positives = 80/136 (58%), Gaps = 5/136 (3%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 +F + L+ +A+ AEI+R G++ V GQ EAA ALGL + T ++LPQA+RSI+ Sbjct: 146 QFSVAVLGLTLVQSAYTAEIIRGGILGVEYGQHEAAAALGLPGYRRTFRIILPQALRSIV 205 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI----WMFIYLSLSIM 380 P ++ ++L K +S+ + +L I N+T Q I ++++ ++FI +LS+ Sbjct: 206 PTGFNEIISLAKGTSIVYVLALPELFYTIQVIYNRTQQVIPLLMVATVWYLFITTALSV- 264 Query: 381 IALFMNRLNAKIALKE 396 I ++ R A+ A++E Sbjct: 265 IQYYIERYFARGAVRE 280 >gi|228963947|ref|ZP_04125082.1| Amino acid ABC transporter [Bacillus thuringiensis serovar sotto str. T04001] gi|228795798|gb|EEM43271.1| Amino acid ABC transporter [Bacillus thuringiensis serovar sotto str. T04001] Length = 226 Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 48/157 (30%), Positives = 92/157 (58%), Gaps = 14/157 (8%) Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244 T + + +F++GI+L+ T L+R + + + +Y+S +I G P LV + + + Sbjct: 27 TTIPLTLITFIIGIILATL-TALARISGSRILQWIARIYVS--IIRGTPLLVQL---FII 80 Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304 + P L V P + + + S A+ +EI+R+ ++++P+GQ EAA +G Sbjct: 81 FYGLPTLN-------IEVEP-YTAAVVGFSLNVGAYASEIIRASILSIPKGQWEAAYTIG 132 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341 +T+ +A + V+LPQA R IPPL++ +++L+K++SLA Sbjct: 133 MTYPQALKRVILPQATRVSIPPLSNTFISLVKDTSLA 169 Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust. Identities = 15/41 (36%), Positives = 26/41 (63%) Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 I+ TL R+S ++++ WI R+YV + R P LV +F ++ Sbjct: 41 ILATLTALARISGSRILQWIARIYVSIIRGTPLLVQLFIIF 81 >gi|226306242|ref|YP_002766202.1| glutamate ABC transporter permease protein [Rhodococcus erythropolis PR4] gi|226185359|dbj|BAH33463.1| glutamate ABC transporter permease protein [Rhodococcus erythropolis PR4] Length = 298 Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 58/178 (32%), Positives = 89/178 (50%), Gaps = 33/178 (18%) Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRH--FHEKTGKALPLLYISTFLIFGLPTLVLIA 239 T+ A VF+ +LG L + RLS H + G + L +P L+L+ Sbjct: 73 TLIAAAMSIVFALILGSALGI--GRLSEHNIIRKICG-------VIVELFRAVPVLILMI 123 Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSC-------YTAAFIAEIVRSGLIAV 292 YQ+ + V F S Y+AL+ Y + IAEIVR+G+ ++ Sbjct: 124 FSYQVFAEYEV---------------FKSKYLALAAVVVGLTLYNGSVIAEIVRAGINSL 168 Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 PRGQ EAA ALG+ + +LLPQA+ +++P L SQ + LK+S+L +G+ +LV Sbjct: 169 PRGQSEAAKALGMRKTQIMVTILLPQAVTAMLPALISQMVVALKDSALGYLIGYVELV 226 Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 32/100 (32%), Positives = 55/100 (55%), Gaps = 4/100 (4%) Query: 55 SNLSLGIGFLSERAGFEIDQGIV----PYTSDSSYATAILVGFVNTFWLAFSGMIPATII 110 + L + IG++ RA E Q P+ +S+ T ++ G T A ++ A I+ Sbjct: 28 AALMVAIGYVIYRALDEKGQLTAAKWDPFLESTSWTTYLIPGIRGTLIAAAMSIVFALIL 87 Query: 111 GTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYK 150 G+ +G GRLS + ++ IC V VE+FR +P L+++ F Y+ Sbjct: 88 GSALGIGRLSEHNIIRKICGVIVELFRAVPVLILMIFSYQ 127 >gi|213970630|ref|ZP_03398756.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tomato T1] gi|301382055|ref|ZP_07230473.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tomato Max13] gi|302060918|ref|ZP_07252459.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tomato K40] gi|302133951|ref|ZP_07259941.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213924627|gb|EEB58196.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tomato T1] Length = 324 Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 67/193 (34%), Positives = 96/193 (49%), Gaps = 15/193 (7%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF--DK 248 VFS VLG L+L RLSR AL YI F +P L+++ + Y + D Sbjct: 96 VFSIVLGTALAL--ARLSR---SPLLAALAWGYIWFFR--SMPALLVLIILYNFAYLYDH 148 Query: 249 PVLG----QFNFIGGSTVS--PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302 VL F STV +F + LS AA+ AEI+R GLI V GQ EAA A Sbjct: 149 IVLAVPFTDLVFAQWSTVDVLSQFTVAVLGLSLMQAAYTAEIIRGGLIGVDAGQHEAAAA 208 Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362 LGL + ++LPQA+RSI+P ++ + L+K +S+ + +L I N+T Sbjct: 209 LGLPASRRVFRIILPQALRSILPSGFNEIIGLVKGTSIVYVLALPELFYTVQVIYNRTQA 268 Query: 363 AIEIILIWMFIYL 375 I ++++ YL Sbjct: 269 VIPLLIVATVWYL 281 >gi|161507109|ref|YP_001577063.1| glutamine ABC transporter membrane protein [Lactobacillus helveticus DPC 4571] gi|160348098|gb|ABX26772.1| Glutamine ABC transporter (membrane protein) [Lactobacillus helveticus DPC 4571] Length = 217 Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 62/206 (30%), Positives = 100/206 (48%), Gaps = 31/206 (15%) Query: 193 SFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPTLVLIALKYQLHF 246 SFV+G++L L ++ G + LPLL I F FGLP L Sbjct: 34 SFVVGLILGLIRYTKIKYVSAIVGFIIDIIRNLPLLLIIFFTYFGLPQL----------- 82 Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306 G +P S+ AL + A +AEIVRSG+ +V GQME A + G++ Sbjct: 83 ------------GIVTNPTTASI-AALVIFEGAMLAEIVRSGIGSVDPGQMEGARSNGMS 129 Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ-TGQAIE 365 + +A V++PQA+ +IP L +Q+++L+K++SLA + +L+ I +Q T I Sbjct: 130 YGQAMYHVVMPQALNHMIPALLAQFVSLVKDTSLATIIVLPELLYNAQIIYSQNTTYLIP 189 Query: 366 IILIWMFIYLSLSIMIALFMNRLNAK 391 + +I +Y + ++ N L K Sbjct: 190 MYVIIAIMYFVVCFCLSTIANYLQKK 215 >gi|320330785|gb|EFW86759.1| cystine ABC transporter, permease protein, putative [Pseudomonas syringae pv. glycinea str. race 4] Length = 222 Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 39/122 (31%), Positives = 70/122 (57%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I S AA+ EI+R+ + +V RGQ EAA ++G+T + R +LPQA R+ +PPL + Sbjct: 94 IGFSLNMAAYACEILRAAISSVERGQWEAAASIGMTRWQTMRRAILPQAARTALPPLGNS 153 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 +++L+K+++LA + +L I +T + + L IY L+ ++ N+L A Sbjct: 154 FISLVKDTALAATIQVPELFRQAQLITARTFEIFTMYLAAALIYWILATALSHLQNKLEA 213 Query: 391 KI 392 ++ Sbjct: 214 RV 215 >gi|315649608|ref|ZP_07902693.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD [Paenibacillus vortex V453] gi|315275081|gb|EFU38456.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD [Paenibacillus vortex V453] Length = 220 Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 40/135 (29%), Positives = 76/135 (56%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P F + I L + + +++E+ RSG+ VP+GQ EAA AL T + R ++LPQA+ I Sbjct: 86 PAFYAGVIGLGLHYSTYLSEVYRSGIEGVPKGQWEAATALNYTKTQTWRSIILPQAVPPI 145 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 IP L + + + K + + A+ +++ I++Q+ +A E + ++L +S + +L Sbjct: 146 IPVLGNYLIVMFKETPILCAITLVEMMLTAKNIVSQSFRAFEPYTLVGILFLIISYIASL 205 Query: 384 FMNRLNAKIALKEKK 398 + RL ++ L+ K Sbjct: 206 LVQRLEKRMNLQRGK 220 >gi|258645825|ref|ZP_05733294.1| glutamine ABC transporter, permease protein [Dialister invisus DSM 15470] gi|260403195|gb|EEW96742.1| glutamine ABC transporter, permease protein [Dialister invisus DSM 15470] Length = 230 Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 54/187 (28%), Positives = 102/187 (54%), Gaps = 7/187 (3%) Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG-QF-NFIGGSTVSPEFMSLYI 271 K +A+ +Y+ +I G P LV I+L + F P LG QF NF + + Sbjct: 49 KILQAVAAVYVE--VIRGTPVLVQISLVF---FGLPFLGIQFPNFEIWGVDFERLSAGVL 103 Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 AL + A+ EIVRSG+ ++ +GQ+EAA++LG + ++ +++PQA+R+I+P + +++ Sbjct: 104 ALILNSGAYQCEIVRSGIQSIHKGQLEAAMSLGFSKWESMVRIIIPQAIRNILPVIGNEF 163 Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 + L+K SS +G ADL+ TI + Q ++I Y ++ ++ + L + Sbjct: 164 VTLIKESSQVSVIGMADLMYTAATIQGISFQPFPPLVIVAVYYFVMTFFVSSCLRVLEIR 223 Query: 392 IALKEKK 398 + ++ + Sbjct: 224 LKVRSVR 230 >gi|157694048|ref|YP_001488510.1| amino acid ABC transporter ATP-binding protein [Bacillus pumilus SAFR-032] gi|157682806|gb|ABV63950.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Bacillus pumilus SAFR-032] Length = 225 Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 37/92 (40%), Positives = 58/92 (63%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P+F + IAL+ + A+IAEI R + ++ +GQ EA +LG+ R ++LPQAMR Sbjct: 92 PDFWAASIALAFHNGAYIAEIFRGAIQSIDQGQKEAGRSLGMGRFLTMRRIILPQAMRRA 151 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355 +PPL +Q++ LK+SSLA + +L +V T Sbjct: 152 LPPLGNQFIIGLKDSSLAAFISVNELFNVATT 183 >gi|116248756|ref|YP_764597.1| putative permease component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] gi|241113599|ref|YP_002973434.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM1325] gi|115253406|emb|CAK11794.1| putative permease component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] gi|240861807|gb|ACS59473.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 219 Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 40/115 (34%), Positives = 65/115 (56%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P +++ AL ++AAF+AEI R + AV +GQ EA+ +LG+ + R V+LPQA+R Sbjct: 84 PAWLAAGFALILWSAAFLAEIWRGCVEAVVKGQWEASASLGMGRLQQMRYVILPQALRVA 143 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378 IPP + ++K ++L +GF +L G + N T Q + + IY +L Sbjct: 144 IPPTVGFSVQIVKGTALTSIIGFVELSKAGTVVTNATFQPFTVYGLVALIYFALC 198 >gi|28872293|ref|NP_794912.1| cystine ABC transporter permease [Pseudomonas syringae pv. tomato str. DC3000] gi|213969394|ref|ZP_03397531.1| cystine ABC tranporter, permease protein [Pseudomonas syringae pv. tomato T1] gi|301386653|ref|ZP_07235071.1| cystine ABC transporter, permease protein, putative [Pseudomonas syringae pv. tomato Max13] gi|302061130|ref|ZP_07252671.1| cystine ABC transporter, permease protein, putative [Pseudomonas syringae pv. tomato K40] gi|302132934|ref|ZP_07258924.1| cystine ABC transporter, permease protein, putative [Pseudomonas syringae pv. tomato NCPPB 1108] gi|28855547|gb|AAO58607.1| cystine ABC transporter, permease protein, putative [Pseudomonas syringae pv. tomato str. DC3000] gi|213925765|gb|EEB59323.1| cystine ABC tranporter, permease protein [Pseudomonas syringae pv. tomato T1] gi|330966437|gb|EGH66697.1| amino acid ABC transporter permease [Pseudomonas syringae pv. actinidiae str. M302091] gi|331016087|gb|EGH96143.1| amino acid ABC transporter permease [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 222 Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 39/122 (31%), Positives = 70/122 (57%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I S AA+ EI+R+ + +V RGQ EAA ++G+T + R +LPQA R+ +PPL + Sbjct: 94 IGFSLNMAAYACEILRAAIGSVERGQWEAAASIGMTRWQTMRRAILPQAARTALPPLGNS 153 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 +++L+K+++LA + +L I +T + + L IY L+ ++ N+L A Sbjct: 154 FISLVKDTALAATIQVPELFRQAQLITARTFEIFTMYLAAALIYWILATALSHLQNKLEA 213 Query: 391 KI 392 ++ Sbjct: 214 RV 215 Score = 38.5 bits (88), Expect = 1.9, Method: Compositional matrix adjust. Identities = 18/32 (56%), Positives = 21/32 (65%) Query: 118 RLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 RLS KLV WI R+YV FR P LV +F +Y Sbjct: 45 RLSRFKLVNWIARIYVSFFRGTPLLVQLFVIY 76 >gi|242243079|ref|ZP_04797524.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Staphylococcus epidermidis W23144] gi|242233427|gb|EES35739.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Staphylococcus epidermidis W23144] Length = 485 Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 32/80 (40%), Positives = 59/80 (73%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IAL ++A+IAEI R+G+ AV +GQ EAA +LG+ +R+ + V++PQA++ I+P L ++ Sbjct: 360 IALVINSSAYIAEIFRAGINAVDKGQTEAARSLGMNYRQTMQSVVMPQAIKKILPALGNE 419 Query: 331 YLNLLKNSSLAVAVGFADLV 350 ++ L+K SS+ +G ++++ Sbjct: 420 FVTLIKESSIVSTIGVSEIM 439 Score = 45.4 bits (106), Expect = 0.017, Method: Compositional matrix adjust. Identities = 35/145 (24%), Positives = 64/145 (44%), Gaps = 27/145 (18%) Query: 13 FSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEI 72 FS+ KF + + I+V +LL + N +N+++ NL I Sbjct: 216 FSKTKFNEEKKQTCIAVPKNSPVLLDKL-----NQTIDNVKEKNL--------------I 256 Query: 73 DQGIVPYTSD--------SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKL 124 DQ + D S Y + + G NT ++ G++ +I+G+ + +LS + Sbjct: 257 DQYMTKAAEDMQDDGNFISKYGSFFIKGIKNTILISLVGVVLGSILGSFIALLKLSKIRP 316 Query: 125 VAWICRVYVEVFRNIPPLVVIFFLY 149 + WI +Y+E R P LV +F ++ Sbjct: 317 LQWIAGIYIEFLRGTPMLVQVFIVF 341 >gi|190895200|ref|YP_001985493.1| nopaline ABC transporter permease [Rhizobium etli CIAT 652] gi|190700861|gb|ACE94943.1| nopaline ABC transporter, permease protein [Rhizobium etli CIAT 652] Length = 231 Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 51/156 (32%), Positives = 84/156 (53%), Gaps = 2/156 (1%) Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285 T+ G P LV + L Y P++ Q +F+ P F +IA + +AA EI+ Sbjct: 57 TYCFRGTPLLVQLFLIYYGIGQLPLVRQ-SFLWPVMREP-FWCAFIAFTLNSAAHTTEIL 114 Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345 R G+ AVPRGQ+EAA ALGL+ RL++ P +R +P ++ + LLK SSLA + Sbjct: 115 RGGIQAVPRGQVEAAKALGLSSFHTARLIVFPLTIRIALPAYVNEVIGLLKASSLASTIT 174 Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 ++ + +++QT E+ ++ YL +++I Sbjct: 175 LLEMTGLARQLVSQTFAPYEVFVVAGAFYLMFTLLI 210 >gi|28870188|ref|NP_792807.1| amino acid ABC transporter permease [Pseudomonas syringae pv. tomato str. DC3000] gi|28853434|gb|AAO56502.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tomato str. DC3000] Length = 324 Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 67/193 (34%), Positives = 96/193 (49%), Gaps = 15/193 (7%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF--DK 248 VFS VLG L+L RLSR AL YI F +P L+++ + Y + D Sbjct: 96 VFSIVLGTALAL--ARLSR---SPLLAALAWGYIWFFR--SMPALLVLIILYNFAYLYDH 148 Query: 249 PVLG----QFNFIGGSTVS--PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302 VL F STV +F + LS AA+ AEI+R GLI V GQ EAA A Sbjct: 149 IVLAVPFTDLVFAQWSTVDVLSQFTVAVLGLSLMQAAYTAEIIRGGLIGVDAGQHEAAAA 208 Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362 LGL + ++LPQA+RSI+P ++ + L+K +S+ + +L I N+T Sbjct: 209 LGLPASRRVFRIILPQALRSILPSGFNEIIGLVKGTSIVYVLALPELFYTVQVIYNRTQA 268 Query: 363 AIEIILIWMFIYL 375 I ++++ YL Sbjct: 269 VIPLLIVATVWYL 281 >gi|87122497|ref|ZP_01078377.1| putative amino acid ABC transporter, permease protein [Marinomonas sp. MED121] gi|86162290|gb|EAQ63575.1| putative amino acid ABC transporter, permease protein [Marinomonas sp. MED121] Length = 216 Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 38/121 (31%), Positives = 68/121 (56%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 ++L+ +T+AF+ EI R + +P+GQ EA+ LGL+ + R ++LPQA+R PP Sbjct: 91 LSLTLFTSAFLVEIWRGCIDTLPKGQREASRCLGLSFLQTLRYIILPQAIRVATPPTVGF 150 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 + ++K ++LA +GF +L VG + N T + ++ + IY L ++ + L Sbjct: 151 SVQVIKGTALASVIGFVELTKVGTMLNNATFEPFKVFTLVALIYFLLCYPLSWYSKTLEK 210 Query: 391 K 391 K Sbjct: 211 K 211 >gi|331700561|ref|YP_004397520.1| polar amino acid ABC transporter inner membrane subunit [Lactobacillus buchneri NRRL B-30929] gi|329127904|gb|AEB72457.1| polar amino acid ABC transporter, inner membrane subunit [Lactobacillus buchneri NRRL B-30929] Length = 467 Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 46/161 (28%), Positives = 86/161 (53%), Gaps = 23/161 (14%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 K++P++ ++ F+ G+P L G + P F++ I + Sbjct: 311 KSIPVMVLAFFVYIGIPNLT----------------------GEKI-PLFIAGVITIVME 347 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 +A+ A VR G+ AV GQMEAA + G+++ +A R ++LPQA+R + P +Q++ LK Sbjct: 348 NSAYTASFVRGGIEAVEGGQMEAARSNGMSYFQAMRYIVLPQALRIMAPSFINQFIIALK 407 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377 +S+ A+G A+L G II++ + ++ L+ +YL++ Sbjct: 408 GTSVLSAIGVAELTQQGTIIISRNMEGFKVWLLVSLMYLAM 448 >gi|319401122|gb|EFV89341.1| amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Staphylococcus epidermidis FRI909] Length = 485 Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 32/80 (40%), Positives = 59/80 (73%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IAL ++A+IAEI R+G+ AV +GQ EAA +LG+ +R+ + V++PQA++ I+P L ++ Sbjct: 360 IALVINSSAYIAEIFRAGINAVDKGQTEAARSLGMNYRQTMQSVVMPQAIKKILPALGNE 419 Query: 331 YLNLLKNSSLAVAVGFADLV 350 ++ L+K SS+ +G ++++ Sbjct: 420 FVTLIKESSIVSTIGVSEIM 439 Score = 45.4 bits (106), Expect = 0.016, Method: Compositional matrix adjust. Identities = 35/145 (24%), Positives = 64/145 (44%), Gaps = 27/145 (18%) Query: 13 FSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEI 72 FS+ KF + + I+V +LL + N +N+++ NL I Sbjct: 216 FSKTKFNEEKKQTCIAVPKNSPVLLDKL-----NQTIDNVKEKNL--------------I 256 Query: 73 DQGIVPYTSD--------SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKL 124 DQ + D S Y + + G NT ++ G++ +I+G+ + +LS + Sbjct: 257 DQYMTKAAEDMQDDGNFISKYGSFFIKGIKNTILISLVGVVLGSILGSFIALLKLSKIRP 316 Query: 125 VAWICRVYVEVFRNIPPLVVIFFLY 149 + WI +Y+E R P LV +F ++ Sbjct: 317 LQWIAGIYIEFLRGTPMLVQVFIVF 341 >gi|238897255|ref|YP_002922932.1| polar amino acid ABC transporter permease [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] gi|229465010|gb|ACQ66784.1| polar amino acid ABC transporter permease [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] Length = 225 Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 40/129 (31%), Positives = 75/129 (58%), Gaps = 1/129 (0%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P+ ++ L+ T+A++A V+SG++AV +GQ A ++LGL + R ++LPQ +R + Sbjct: 94 PKITTVVCGLALITSAYLAHAVKSGIVAVGQGQWSAGLSLGLNSWQILRFIILPQVLRVM 153 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG-QAIEIILIWMFIYLSLSIMIA 382 P +Q+++L+K++SLA VG +L + + N+T ++E+ L IY L ++ Sbjct: 154 FPSFVNQWISLIKDTSLAYIVGVNELTFLATQVNNRTMVHSMEVFLFVGLIYFILCFILD 213 Query: 383 LFMNRLNAK 391 +N K Sbjct: 214 FSVNYFLKK 222 >gi|224371422|ref|YP_002605586.1| GltJ2 [Desulfobacterium autotrophicum HRM2] gi|223694139|gb|ACN17422.1| GltJ2 [Desulfobacterium autotrophicum HRM2] Length = 240 Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 63/223 (28%), Positives = 102/223 (45%), Gaps = 31/223 (13%) Query: 178 FPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF---------- 227 + TLT+ A + + VLGI ++ R FH K +AL L Y+ F Sbjct: 25 WTTLTLSLAA--WCVAVVLGIGVAA-----CRVFHNKCLRALGLGYVLVFRNIPFLVQLF 77 Query: 228 -LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286 F P L+ +++ ++ P ++ F G+T L YTA+ +AE R Sbjct: 78 FWYFAAPLLLPRSIQDWMYDTVP---EYAFWCGAT----------GLGMYTASRVAEQFR 124 Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346 +G +A+ Q AA A GL + V+LP A R IIP T+++L KNS+L + +G Sbjct: 125 AGFLAISEDQYRAAYATGLRPAQVYGYVILPYAFRIIIPAFTTEFLTCFKNSALTMTIGV 184 Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 ++ I + T +E YL+++ +AL M R+ Sbjct: 185 MEITHTAYIIDSFTWHGLETTTAASLCYLTIAQGVALVMWRIE 227 Score = 39.7 bits (91), Expect = 0.76, Method: Compositional matrix adjust. Identities = 37/112 (33%), Positives = 51/112 (45%), Gaps = 10/112 (8%) Query: 79 YTSDSS------YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVY 132 YT D S Y +L G T L+ + A ++G V A R+ NK + + Y Sbjct: 4 YTFDWSVLWRQPYGAMMLSGIWTTLTLSLAAWCVAVVLGIGVAACRVFHNKCLRALGLGY 63 Query: 133 VEVFRNIPPLVVIFFLYKSVLSVLP--IPD--HSIVLPFGMFLNNRGLSFPT 180 V VFRNIP LV +FF Y + +LP I D + V + + GL T Sbjct: 64 VLVFRNIPFLVQLFFWYFAAPLLLPRSIQDWMYDTVPEYAFWCGATGLGMYT 115 >gi|152994484|ref|YP_001339319.1| polar amino acid ABC transporter inner membrane subunit [Marinomonas sp. MWYL1] gi|150835408|gb|ABR69384.1| polar amino acid ABC transporter, inner membrane subunit [Marinomonas sp. MWYL1] Length = 216 Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 39/121 (32%), Positives = 68/121 (56%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 ++L+ +T+AF+ EI R + +P+GQ EA+ LGL+ + R ++LPQA+R P Sbjct: 91 LSLTFFTSAFLVEIWRGCIDTLPKGQWEASRCLGLSFLQTLRFIILPQAIRVATAPTVGF 150 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 + ++K ++LA +GF +L VG + N T + +I + IY L ++L+ L Sbjct: 151 SVQVIKGTALASVIGFVELTKVGTMLNNATFEPFKIFTLVALIYFVLCYPLSLYSKHLEK 210 Query: 391 K 391 K Sbjct: 211 K 211 >gi|51598239|ref|YP_072430.1| ABC amino acid transporter, permease subunit [Yersinia pseudotuberculosis IP 32953] gi|170026443|ref|YP_001722948.1| polar amino acid ABC transporter inner membrane subunit [Yersinia pseudotuberculosis YPIII] gi|186897482|ref|YP_001874594.1| polar amino acid ABC transporter inner membrane subunit [Yersinia pseudotuberculosis PB1/+] gi|51591521|emb|CAH23193.1| ABC amino acid transporter, permease subunit [Yersinia pseudotuberculosis IP 32953] gi|169752977|gb|ACA70495.1| polar amino acid ABC transporter, inner membrane subunit [Yersinia pseudotuberculosis YPIII] gi|186700508|gb|ACC91137.1| polar amino acid ABC transporter, inner membrane subunit [Yersinia pseudotuberculosis PB1/+] Length = 251 Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 38/129 (29%), Positives = 76/129 (58%), Gaps = 1/129 (0%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 PE ++ AL+ +A++A V++G++A+ GQ +A ++LG + ++LPQA+R + Sbjct: 94 PEITTVVCALALIASAYLAHAVKAGIMAIGAGQWQAGLSLGFNRWQTLWFIVLPQALRMM 153 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG-QAIEIILIWMFIYLSLSIMIA 382 +P +Q+++L+K++SLA VG +L + + N++ +E+ L +Y L + + Sbjct: 154 VPSFINQWISLIKDTSLAYIVGVNELTFLATQVNNRSMVYPMEVFLFVALVYFVLCLALD 213 Query: 383 LFMNRLNAK 391 L N LN + Sbjct: 214 LLANGLNRR 222 >gi|56808255|ref|ZP_00366025.1| COG0765: ABC-type amino acid transport system, permease component [Streptococcus pyogenes M49 591] Length = 210 Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 40/131 (30%), Positives = 73/131 (55%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P + Y+ S +AA+I+E+ RS + A+ +GQ EAA ALGL + + ++LPQ R Sbjct: 79 PALLCAYLGFSMVSAAYISEVFRSSIEAIDKGQWEAAKALGLPYALMVKKIILPQVFRIA 138 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 +PPL + ++++K+SSLA + D+ I + + + ++ FIY ++ ++ Sbjct: 139 VPPLGNVIIDMVKSSSLAAMITVPDIFQNAKIIGGREWDYMSMYILVAFIYWLIAFLLER 198 Query: 384 FMNRLNAKIAL 394 + L K+AL Sbjct: 199 YQEFLENKLAL 209 >gi|302542075|ref|ZP_07294417.1| glutamate permease [Streptomyces hygroscopicus ATCC 53653] gi|302459693|gb|EFL22786.1| glutamate permease [Streptomyces himastatinicus ATCC 53653] Length = 311 Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 38/125 (30%), Positives = 73/125 (58%), Gaps = 5/125 (4%) Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322 S F +L + L+ Y + AE++R+G+ +VPRGQ EAA ALG++ + VL+PQA+R+ Sbjct: 139 STGFWALVVGLTVYNGSVQAEVLRAGINSVPRGQREAAYALGMSKTQVMTTVLIPQAVRA 198 Query: 323 IIPPLTSQYLNLLKNSSLAVAVGF-----ADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377 ++P + SQ + LK++SL + + G ++N + +I++ IY+++ Sbjct: 199 MLPTIISQLVVTLKDTSLGYVITYQELLFQLQQLAGNIVVNDDNPYVPVIIVGGTIYIAM 258 Query: 378 SIMIA 382 + ++ Sbjct: 259 CLALS 263 >gi|229490879|ref|ZP_04384714.1| glutamate transporter permease protein GluD [Rhodococcus erythropolis SK121] gi|229322269|gb|EEN88055.1| glutamate transporter permease protein GluD [Rhodococcus erythropolis SK121] Length = 298 Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 58/178 (32%), Positives = 89/178 (50%), Gaps = 33/178 (18%) Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRH--FHEKTGKALPLLYISTFLIFGLPTLVLIA 239 T+ A VF+ +LG L + RLS H + G + L +P L+L+ Sbjct: 73 TLIAAAMSIVFALILGSALGI--GRLSEHNIIRKICG-------VIVELFRAVPVLILMI 123 Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSC-------YTAAFIAEIVRSGLIAV 292 YQ+ + V F S Y+AL+ Y + IAEIVR+G+ ++ Sbjct: 124 FSYQVFAEYEV---------------FKSKYLALAAVVVGLTLYNGSVIAEIVRAGINSL 168 Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 PRGQ EAA ALG+ + +LLPQA+ +++P L SQ + LK+S+L +G+ +LV Sbjct: 169 PRGQSEAAKALGMRKTQIMVTILLPQAVTAMLPALISQMVVALKDSALGYLIGYVELV 226 Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 32/100 (32%), Positives = 55/100 (55%), Gaps = 4/100 (4%) Query: 55 SNLSLGIGFLSERAGFEIDQGIV----PYTSDSSYATAILVGFVNTFWLAFSGMIPATII 110 + L + IG++ RA E Q P+ +S+ T ++ G T A ++ A I+ Sbjct: 28 AALMVAIGYVIYRALDEKGQLTAAKWDPFLESTSWTTYLIPGIRGTLIAAAMSIVFALIL 87 Query: 111 GTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYK 150 G+ +G GRLS + ++ IC V VE+FR +P L+++ F Y+ Sbjct: 88 GSALGIGRLSEHNIIRKICGVIVELFRAVPVLILMIFSYQ 127 >gi|168701474|ref|ZP_02733751.1| Amino acid ABC transporter binding protein and permease protein [Gemmata obscuriglobus UQM 2246] Length = 516 Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 34/70 (48%), Positives = 54/70 (77%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + L+ +A+ AE R+GL+AVPRGQMEAA+ALG++ A R+V++PQA R +IPP+T+ Sbjct: 386 LGLAINYSAYEAENYRAGLLAVPRGQMEAALALGMSPLTALRVVIVPQAARIVIPPVTND 445 Query: 331 YLNLLKNSSL 340 ++ L K++S+ Sbjct: 446 FIALFKDTSV 455 >gi|59710614|ref|YP_203390.1| cystine transport system permease protein [Vibrio fischeri ES114] gi|59478715|gb|AAW84502.1| cystine transport system permease protein [Vibrio fischeri ES114] Length = 223 Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 50/144 (34%), Positives = 83/144 (57%), Gaps = 12/144 (8%) Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLV-LIALKYQLHFDKPVLGQFNFIGGSTVSPEFM 267 R F L LYIS F G P LV L L Y L P+ F+G F Sbjct: 44 RVFKVPVFDQLSQLYISFFR--GTPLLVQLFLLYYGLPQVFPI-----FVGLDA----FS 92 Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327 + I L+ + AA++AE +R+ +I + R QMEA++++G+T +A R ++LPQA R +P L Sbjct: 93 AAVIGLTLHFAAYMAESIRAAIIGIDRSQMEASLSIGMTTSQAMRRIILPQATRVALPSL 152 Query: 328 TSQYLNLLKNSSLAVAVGFADLVS 351 + +++++K++SLA +G A++++ Sbjct: 153 MNYFIDMIKSTSLAFTLGVAEIMA 176 >gi|259501521|ref|ZP_05744423.1| ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus iners DSM 13335] gi|302191506|ref|ZP_07267760.1| Glutamine ABC transporter, permease protein [Lactobacillus iners AB-1] gi|309804259|ref|ZP_07698336.1| putative glutamine ABC transporter, permease protein GlnP [Lactobacillus iners LactinV 11V1-d] gi|309805507|ref|ZP_07699552.1| putative glutamine ABC transporter, permease protein GlnP [Lactobacillus iners LactinV 09V1-c] gi|309808597|ref|ZP_07702489.1| putative glutamine ABC transporter, permease protein GlnP [Lactobacillus iners LactinV 01V1-a] gi|309809500|ref|ZP_07703358.1| putative glutamine ABC transporter, permease protein GlnP [Lactobacillus iners SPIN 2503V10-D] gi|312871490|ref|ZP_07731584.1| putative glutamine ABC transporter, permease protein GlnP [Lactobacillus iners LEAF 3008A-a] gi|312872417|ref|ZP_07732486.1| putative glutamine ABC transporter, permease protein GlnP [Lactobacillus iners LEAF 2062A-h1] gi|312874423|ref|ZP_07734453.1| putative glutamine ABC transporter, permease protein GlnP [Lactobacillus iners LEAF 2052A-d] gi|312874570|ref|ZP_07734595.1| putative glutamine ABC transporter, permease protein GlnP [Lactobacillus iners LEAF 2053A-b] gi|325911827|ref|ZP_08174231.1| putative glutamine ABC transporter, permease protein GlnP [Lactobacillus iners UPII 143-D] gi|325913453|ref|ZP_08175819.1| putative glutamine ABC transporter, permease protein GlnP [Lactobacillus iners UPII 60-B] gi|329920202|ref|ZP_08277014.1| putative glutamine ABC transporter permease protein GlnP [Lactobacillus iners SPIN 1401G] gi|259167039|gb|EEW51534.1| ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus iners DSM 13335] gi|308163662|gb|EFO65932.1| putative glutamine ABC transporter, permease protein GlnP [Lactobacillus iners LactinV 11V1-d] gi|308165158|gb|EFO67396.1| putative glutamine ABC transporter, permease protein GlnP [Lactobacillus iners LactinV 09V1-c] gi|308168071|gb|EFO70197.1| putative glutamine ABC transporter, permease protein GlnP [Lactobacillus iners LactinV 01V1-a] gi|308170172|gb|EFO72207.1| putative glutamine ABC transporter, permease protein GlnP [Lactobacillus iners SPIN 2503V10-D] gi|311089961|gb|EFQ48380.1| putative glutamine ABC transporter, permease protein GlnP [Lactobacillus iners LEAF 2053A-b] gi|311090035|gb|EFQ48449.1| putative glutamine ABC transporter, permease protein GlnP [Lactobacillus iners LEAF 2052A-d] gi|311091999|gb|EFQ50374.1| putative glutamine ABC transporter, permease protein GlnP [Lactobacillus iners LEAF 2062A-h1] gi|311093010|gb|EFQ51360.1| putative glutamine ABC transporter, permease protein GlnP [Lactobacillus iners LEAF 3008A-a] gi|325476333|gb|EGC79495.1| putative glutamine ABC transporter, permease protein GlnP [Lactobacillus iners UPII 143-D] gi|325477222|gb|EGC80368.1| putative glutamine ABC transporter, permease protein GlnP [Lactobacillus iners UPII 60-B] gi|328936423|gb|EGG32869.1| putative glutamine ABC transporter permease protein GlnP [Lactobacillus iners SPIN 1401G] Length = 219 Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 61/212 (28%), Positives = 105/212 (49%), Gaps = 31/212 (14%) Query: 191 VFSFVLGIVLSL---FATRLSRH---FHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244 + SF+LG+ L + ++ H F + LPLL I F FGLP Sbjct: 32 ILSFILGLFLGIVRYLKIKVISHIVGFIVDILRNLPLLLIIFFAYFGLP----------- 80 Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304 Q + T + IAL + A +AEIVRSG+ AV +GQ+E A++ G Sbjct: 81 --------QLGIVTNVTCAA-----IIALVVFEGAMLAEIVRSGIGAVNKGQLEGALSNG 127 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ-TGQA 363 +T+ +A V++PQA+ +IP + SQ+++L+K++SLA + +L+ I +Q T Sbjct: 128 MTYAQAMYHVVVPQALHFMIPAILSQFVSLIKDTSLATIIVLPELLYHAQIIYSQNTTYL 187 Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395 + + +I +Y + ++L + L + + K Sbjct: 188 LPMYVIVALMYFIICFTLSLIADHLQKQYSAK 219 >gi|108810144|ref|YP_654060.1| putative amino acid transport system permease [Yersinia pestis Antiqua] gi|108814126|ref|YP_649893.1| amino acid transport system permease [Yersinia pestis Nepal516] gi|145601164|ref|YP_001165240.1| amino acid transport system permease [Yersinia pestis Pestoides F] gi|150260957|ref|ZP_01917685.1| putative amino acid transport system permease [Yersinia pestis CA88-4125] gi|162421147|ref|YP_001608459.1| polar amino acid ABC transporter permease [Yersinia pestis Angola] gi|165926123|ref|ZP_02221955.1| polar amino amino acid ABC transporter, PAAT family, permease protein [Yersinia pestis biovar Orientalis str. F1991016] gi|165939983|ref|ZP_02228520.1| polar amino amino acid ABC transporter, PAAT family, permease protein [Yersinia pestis biovar Orientalis str. IP275] gi|166009454|ref|ZP_02230352.1| polar amino amino acid ABC transporter, PAAT family, permease protein [Yersinia pestis biovar Antiqua str. E1979001] gi|166213182|ref|ZP_02239217.1| polar amino amino acid ABC transporter, PAAT family, permease protein [Yersinia pestis biovar Antiqua str. B42003004] gi|167401543|ref|ZP_02307037.1| polar amino amino acid ABC transporter, PAAT family, permease protein [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167422872|ref|ZP_02314625.1| polar amino amino acid ABC transporter, PAAT family, permease protein [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167425488|ref|ZP_02317241.1| polar amino amino acid ABC transporter, PAAT family, permease protein [Yersinia pestis biovar Mediaevalis str. K1973002] gi|167468128|ref|ZP_02332832.1| putative amino acid transport system permease [Yersinia pestis FV-1] gi|218931085|ref|YP_002348960.1| putative amino acid transport system permease [Yersinia pestis CO92] gi|229839817|ref|ZP_04459976.1| putative amino acid transport system permease [Yersinia pestis biovar Orientalis str. PEXU2] gi|229841902|ref|ZP_04462058.1| putative amino acid transport system permease [Yersinia pestis biovar Orientalis str. India 195] gi|229896779|ref|ZP_04511942.1| putative amino acid transport system permease [Yersinia pestis Pestoides A] gi|229904667|ref|ZP_04519778.1| putative amino acid transport system permease [Yersinia pestis Nepal516] gi|294505632|ref|YP_003569694.1| putative amino acid transport system permease [Yersinia pestis Z176003] gi|108777774|gb|ABG20293.1| amino acid transport system permease [Yersinia pestis Nepal516] gi|108782057|gb|ABG16115.1| putative amino acid transport system permease [Yersinia pestis Antiqua] gi|115349696|emb|CAL22677.1| putative amino acid transport system permease [Yersinia pestis CO92] gi|145212860|gb|ABP42267.1| amino acid transport system permease [Yersinia pestis Pestoides F] gi|149290365|gb|EDM40442.1| putative amino acid transport system permease [Yersinia pestis CA88-4125] gi|162353962|gb|ABX87910.1| polar amino amino acid ABC transporter, PAAT family, permease protein [Yersinia pestis Angola] gi|165912109|gb|EDR30749.1| polar amino amino acid ABC transporter, PAAT family, permease protein [Yersinia pestis biovar Orientalis str. IP275] gi|165921983|gb|EDR39160.1| polar amino amino acid ABC transporter, PAAT family, permease protein [Yersinia pestis biovar Orientalis str. F1991016] gi|165991376|gb|EDR43677.1| polar amino amino acid ABC transporter, PAAT family, permease protein [Yersinia pestis biovar Antiqua str. E1979001] gi|166205480|gb|EDR49960.1| polar amino amino acid ABC transporter, PAAT family, permease protein [Yersinia pestis biovar Antiqua str. B42003004] gi|166958264|gb|EDR55285.1| polar amino amino acid ABC transporter, PAAT family, permease protein [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167048925|gb|EDR60333.1| polar amino amino acid ABC transporter, PAAT family, permease protein [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167055502|gb|EDR65295.1| polar amino amino acid ABC transporter, PAAT family, permease protein [Yersinia pestis biovar Mediaevalis str. K1973002] gi|229678785|gb|EEO74890.1| putative amino acid transport system permease [Yersinia pestis Nepal516] gi|229691241|gb|EEO83294.1| putative amino acid transport system permease [Yersinia pestis biovar Orientalis str. India 195] gi|229696183|gb|EEO86230.1| putative amino acid transport system permease [Yersinia pestis biovar Orientalis str. PEXU2] gi|229700217|gb|EEO88253.1| putative amino acid transport system permease [Yersinia pestis Pestoides A] gi|262363797|gb|ACY60518.1| putative amino acid transport system permease [Yersinia pestis D106004] gi|262367733|gb|ACY64290.1| putative amino acid transport system permease [Yersinia pestis D182038] gi|294356091|gb|ADE66432.1| putative amino acid transport system permease [Yersinia pestis Z176003] gi|320017441|gb|ADW01013.1| putative amino acid transport system permease [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 251 Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 38/129 (29%), Positives = 76/129 (58%), Gaps = 1/129 (0%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 PE ++ AL+ +A++A V++G++A+ GQ +A ++LG + ++LPQA+R + Sbjct: 94 PEITTVVCALALIASAYLAHAVKAGIMAIGAGQWQAGLSLGFNRWQTLWFIVLPQALRMM 153 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG-QAIEIILIWMFIYLSLSIMIA 382 +P +Q+++L+K++SLA VG +L + + N++ +E+ L +Y L + + Sbjct: 154 VPSFINQWISLIKDTSLAYIVGVNELTFLATQVNNRSMVYPMEVFLFVALVYFVLCLALD 213 Query: 383 LFMNRLNAK 391 L N LN + Sbjct: 214 LLANGLNRR 222 >gi|322804727|emb|CBZ02279.1| amino acid ABC transporter, permease protein [Clostridium botulinum H04402 065] Length = 214 Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 36/116 (31%), Positives = 69/116 (59%), Gaps = 1/116 (0%) Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 A++AE R+G+ ++ +GQ+EAA LG T+ + +++PQA+R++IPP+ ++ +NL+K+ Sbjct: 99 GAYLAETFRAGIESIDKGQVEAAKVLGFTYNQTMFKIIVPQAIRNVIPPICNESINLIKD 158 Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393 S+L A+G D++ ++ + I I IYL ++ + + L K A Sbjct: 159 SALVAAIGIGDMLRAAKEVVTR-DFTITPFFIAAAIYLLITAFLVIIFRTLEKKCA 213 >gi|319776668|ref|YP_004139156.1| amino-acid ABC transporter permease [Haemophilus influenzae F3047] gi|329124186|ref|ZP_08252733.1| polar amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Haemophilus aegyptius ATCC 11116] gi|317451259|emb|CBY87493.1| probable amino-acid ABC transporter permease protein [Haemophilus influenzae F3047] gi|327467611|gb|EGF13109.1| polar amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Haemophilus aegyptius ATCC 11116] Length = 238 Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 59/207 (28%), Positives = 110/207 (53%), Gaps = 19/207 (9%) Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249 F ++ +++++ T +F K +++ YIS +I G P LV I + + + P Sbjct: 45 FFCGLLIAVIVAVICTLPHPNFMTKLLQSIGRAYIS--IIRGTPMLVQI---FIIFYGLP 99 Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309 +G + P F + IA S A+ AE VR+ +IA+P+GQ EA+ A+G+ +++ Sbjct: 100 EVG-------IKLEP-FPTAIIAFSVNIGAYAAETVRASIIAIPKGQWEASYAIGMNYQQ 151 Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369 A ++PQA+R +P L++ +++ +K++SLA V A+L V I T + E ILI Sbjct: 152 AFIRTIMPQALRISVPSLSNTFISTVKDTSLASLVWIAELFRVAQNI---TAENYEFILI 208 Query: 370 W---MFIYLSLSIMIALFMNRLNAKIA 393 + IY ++++ RL +++ Sbjct: 209 YSEAALIYWVFCFVLSIGQMRLEKRLS 235 >gi|315657916|ref|ZP_07910790.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Staphylococcus lugdunensis M23590] gi|315496952|gb|EFU85273.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Staphylococcus lugdunensis M23590] Length = 497 Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 33/85 (38%), Positives = 61/85 (71%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+ IAL ++A+IAEI+R+G+ AV +GQ EAA LGL + + + V++PQA+++I+P Sbjct: 367 FICGIIALIINSSAYIAEIIRAGINAVDKGQTEAAQCLGLNYNQTMKNVIMPQAIKNILP 426 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLV 350 L ++++ L+K SS+ +G ++++ Sbjct: 427 ALGNEFVTLIKESSIVSTIGVSEVM 451 Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 23/67 (34%), Positives = 40/67 (59%) Query: 83 SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142 + Y + + G VNT L+ G+I ++GTL+ +LS K+++WI Y+E+ R P L Sbjct: 287 TKYGSFFVKGIVNTIILSAIGVIIGAVLGTLIALAKLSKIKIISWIAAAYIEIIRGTPLL 346 Query: 143 VVIFFLY 149 V +F ++ Sbjct: 347 VQVFIVF 353 >gi|283797387|ref|ZP_06346540.1| glutamine ABC transporter, permease protein [Clostridium sp. M62/1] gi|291075063|gb|EFE12427.1| glutamine ABC transporter, permease protein [Clostridium sp. M62/1] gi|295090529|emb|CBK76636.1| amino acid ABC transporter membrane protein, PAAT family (TC 3.A.1.3.-) [Clostridium cf. saccharolyticum K10] gi|295115439|emb|CBL36286.1| amino acid ABC transporter membrane protein, PAAT family (TC 3.A.1.3.-) [butyrate-producing bacterium SM4/1] Length = 230 Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 39/122 (31%), Positives = 72/122 (59%), Gaps = 4/122 (3%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +A + A++AEI RSG++++ GQ EA +LG + + +++PQA ++++P L ++ Sbjct: 104 LAFGINSGAYVAEIFRSGIMSIDNGQFEAGRSLGFNYPQTMWYIIMPQAFKNVLPALCNE 163 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA----IEIILIWMFIYLSLSIMIALFMN 386 ++ LLK +S+A +G DL G I ++T A I + LI++ I L + +I + Sbjct: 164 FIALLKETSIAGYIGLQDLTKGGDIIRSRTYSAFMPLIAVALIYLAIVLIFTQLIKILER 223 Query: 387 RL 388 RL Sbjct: 224 RL 225 >gi|257885498|ref|ZP_05665151.1| amino acid ABC transporter [Enterococcus faecium 1,231,501] gi|257821354|gb|EEV48484.1| amino acid ABC transporter [Enterococcus faecium 1,231,501] Length = 213 Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 59/221 (26%), Positives = 111/221 (50%), Gaps = 41/221 (18%) Query: 185 TNAKIFVFSFV----LGIVLSLFATRLSRHF---------HEKTGKALPLLYISTFLIFG 231 T K+F+F+ + LGI+L+L LS HF + + PLL F+ +G Sbjct: 17 TTLKLFLFTLIGSLPLGIILAL---GLSLHFKPLRYLLQTYVWVMRGTPLLLQLIFIFYG 73 Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291 LPT+ ++ FD+ F + IA AA+ AEI R G+ + Sbjct: 74 LPTIGIV-------FDR-----------------FEAALIAFILNYAAYFAEIFRGGIQS 109 Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 +P+GQ EAA L L+ + +++PQ + ++P + ++ +NL+K+SSL +G D++ Sbjct: 110 IPQGQYEAAQVLQLSPFQTVTKIVIPQVTKIVLPSVGNEVINLVKDSSLIYILGLGDVMR 169 Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 G + + + ++ + + IYL+L+ ++ + M ++ K+ Sbjct: 170 AGKIAMERDATLLPLLGVAI-IYLTLTGILTIVMKQVEGKL 209 >gi|153948328|ref|YP_001403105.1| polar amino acid ABC transporter permease [Yersinia pseudotuberculosis IP 31758] gi|152959823|gb|ABS47284.1| polar amino amino acid ABC transporter, PAAT family, permease protein [Yersinia pseudotuberculosis IP 31758] Length = 251 Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 38/129 (29%), Positives = 76/129 (58%), Gaps = 1/129 (0%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 PE ++ AL+ +A++A V++G++A+ GQ +A ++LG + ++LPQA+R + Sbjct: 94 PEITTVVCALALIASAYLAHAVKAGIMAIGAGQWQAGLSLGFNRWQTLWFIVLPQALRMM 153 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG-QAIEIILIWMFIYLSLSIMIA 382 +P +Q+++L+K++SLA VG +L + + N++ +E+ L +Y L + + Sbjct: 154 VPSFINQWISLIKDTSLAYIVGVNELTFLATQVNNRSMVYPMEVFLFVALVYFVLCLALD 213 Query: 383 LFMNRLNAK 391 L N LN + Sbjct: 214 LLANGLNRR 222 >gi|148273185|ref|YP_001222746.1| putative glutamate ABC transporter, permease [Clavibacter michiganensis subsp. michiganensis NCPPB 382] gi|147831115|emb|CAN02067.1| putative glutamate ABC transpoter, permease component [Clavibacter michiganensis subsp. michiganensis NCPPB 382] Length = 274 Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 42/128 (32%), Positives = 74/128 (57%), Gaps = 2/128 (1%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 + S+ AL+ Y A I E +RSG++ +PRGQ EA +A+GL + LV PQA R+++P Sbjct: 130 YWSVVTALALYNGAIIGEALRSGILGLPRGQREAGLAIGLRPLQNRLLVEFPQAFRTMLP 189 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ--AIEIILIWMFIYLSLSIMIAL 383 + +Q + L+K+++L V L G I+ T + ++ I ++ + +YL L++ ++ Sbjct: 190 IIVAQLVVLIKDTALGTIVSLVGLTKQGELILEATSRDNSLPIFVVMVGMYLVLNLSVST 249 Query: 384 FMNRLNAK 391 RL K Sbjct: 250 IARRLARK 257 >gi|330871999|gb|EGH06148.1| amino acid ABC transporter permease [Pseudomonas syringae pv. glycinea str. race 4] Length = 165 Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 39/122 (31%), Positives = 70/122 (57%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I S AA+ EI+R+ + +V RGQ EAA ++G+T + R +LPQA R+ +PPL + Sbjct: 37 IGFSLNMAAYACEILRAAISSVERGQWEAAASIGMTRWQTMRRAILPQAARTALPPLGNS 96 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 +++L+K+++LA + +L I +T + + L IY L+ ++ N+L A Sbjct: 97 FISLVKDTALAATIQVPELFRQAQLITARTFEIFTMYLAAALIYWILATALSHLQNKLEA 156 Query: 391 KI 392 ++ Sbjct: 157 RV 158 >gi|288960750|ref|YP_003451090.1| amino acid ABC transporter permease protein [Azospirillum sp. B510] gi|288913058|dbj|BAI74546.1| amino acid ABC transporter permease protein [Azospirillum sp. B510] Length = 215 Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 48/121 (39%), Positives = 67/121 (55%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P ++ AL + A+++EI R L AVP GQ EAA+ALG +LLPQA R Sbjct: 84 PPLVASIAALGLASGAYVSEIYRGALNAVPHGQSEAALALGFPGWSIWSRILLPQAFRIS 143 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 +P L ++ + LLK SSL VG A+L TI + +EI L IYL+++ +AL Sbjct: 144 VPALVNELILLLKASSLISVVGVAELTRTSQTISASNYRPLEIYLAAGLIYLAINGALAL 203 Query: 384 F 384 F Sbjct: 204 F 204 >gi|116629029|ref|YP_814201.1| ABC-type amino acid transport system, permease component [Lactobacillus gasseri ATCC 33323] gi|300362321|ref|ZP_07058497.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus gasseri JV-V03] gi|116094611|gb|ABJ59763.1| amino acid ABC transporter membrane protein, PAAT family [Lactobacillus gasseri ATCC 33323] gi|300353312|gb|EFJ69184.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus gasseri JV-V03] Length = 217 Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 60/205 (29%), Positives = 105/205 (51%), Gaps = 17/205 (8%) Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV-LIALKYQLHF 246 +IF ++ V+ I L L H + K KA+ Y+ ++I G P L+ LI + Y L Sbjct: 24 EIFFWTTVVSIPLGLLVA-FGLHSNLKLVKAILKFYV--WIIRGTPLLLQLIFIFYGL-- 78 Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306 P +G V P + + +A AA+ AEI R GL AVP GQ EAA LGL+ Sbjct: 79 --PTVG--------IVFPRYEAALVAFIINYAAYFAEIFRGGLQAVPVGQFEAAQVLGLS 128 Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 + ++ PQ ++ ++P + ++ +NL+K+SSL +G DL+ G + + + Sbjct: 129 RWQTINRIVRPQVVKIVLPSIGNELINLVKDSSLVYVIGLGDLLRAGNVATARDVSLVPL 188 Query: 367 ILIWMFIYLSLSIMIALFMNRLNAK 391 +L+ +YL+++ ++ + + K Sbjct: 189 VLV-GCVYLAMTAVLTALLRVVEKK 212 >gi|148543531|ref|YP_001270901.1| polar amino acid ABC transporter, inner membrane subunit [Lactobacillus reuteri DSM 20016] gi|184152937|ref|YP_001841278.1| ABC transporter permease component [Lactobacillus reuteri JCM 1112] gi|227363514|ref|ZP_03847634.1| L-cystine ABC superfamily ATP binding cassette transporter, membrane protein YckJ [Lactobacillus reuteri MM2-3] gi|227545192|ref|ZP_03975241.1| L-cystine ABC superfamily ATP binding cassette transporter, membrane protein YckJ [Lactobacillus reuteri CF48-3A] gi|300909131|ref|ZP_07126592.1| polar amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus reuteri SD2112] gi|325681879|ref|ZP_08161397.1| polar amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus reuteri MM4-1A] gi|148530565|gb|ABQ82564.1| amino acid ABC transporter membrane protein, PAAT family [Lactobacillus reuteri DSM 20016] gi|183224281|dbj|BAG24798.1| ABC transporter permease component [Lactobacillus reuteri JCM 1112] gi|227071451|gb|EEI09754.1| L-cystine ABC superfamily ATP binding cassette transporter, membrane protein YckJ [Lactobacillus reuteri MM2-3] gi|227184838|gb|EEI64909.1| L-cystine ABC superfamily ATP binding cassette transporter, membrane protein YckJ [Lactobacillus reuteri CF48-3A] gi|300892996|gb|EFK86355.1| polar amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus reuteri SD2112] gi|324978523|gb|EGC15472.1| polar amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus reuteri MM4-1A] Length = 233 Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 51/201 (25%), Positives = 104/201 (51%), Gaps = 6/201 (2%) Query: 191 VFSFVLGIVLSLFAT--RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248 + SF G++++L RLSR + G + L +I++F ++ + L+ + + F Sbjct: 25 IISFFFGLIIALVTALIRLSR----QRGAFMILKWIASFYVWLFRSTPLLVQLFIVFFGL 80 Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308 P L + F + I S T A+ +E +R+ + +VP GQ EA A+G+T Sbjct: 81 PYLRIKGVLPHGIKLEPFTAGIITFSLNTGAYASETIRAAISSVPTGQWEAGAAIGMTRL 140 Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368 + ++LPQA+R +PPL++ +++L+K++SLA ++ ++ +V I + Q + + Sbjct: 141 QILWRIILPQALRVALPPLSNSFISLVKDTSLAASITIMEMFAVSQQIAAENYQPLLMYT 200 Query: 369 IWMFIYLSLSIMIALFMNRLN 389 + +Y + +++ F L Sbjct: 201 LVAMVYAVFTTVLSYFQGYLE 221 >gi|319945586|ref|ZP_08019838.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus australis ATCC 700641] gi|319748185|gb|EFW00427.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus australis ATCC 700641] Length = 520 Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 40/109 (36%), Positives = 64/109 (58%) Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 +S T A+++EIVR G++AV GQ EAA ALG+TH + R V+LPQ +R+I+P ++++ Sbjct: 383 VSINTGAYMSEIVRGGILAVDTGQFEAATALGMTHGQTMRKVVLPQVVRNILPATGNEFV 442 Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 +K++S+ + +L G T+ Q Q I IY L+ I Sbjct: 443 INIKDTSVLNVISVVELYFTGNTVATQNYQYFPTFTIIAVIYFILTFTI 491 >gi|317047372|ref|YP_004115020.1| polar amino acid ABC transporter inner membrane subunit [Pantoea sp. At-9b] gi|316948989|gb|ADU68464.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea sp. At-9b] Length = 218 Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 55/196 (28%), Positives = 103/196 (52%), Gaps = 13/196 (6%) Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256 G V+ L A R + K + L+++ LI G P +V + Y F P++ Sbjct: 33 GFVIGLLAGT-CRALGGRITKTISLIFVE--LIRGTPIMVQVMFIY---FALPMVLPIRI 86 Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316 VS +++ I + A+IAEI R ++++ +G EA++A+GL+ R V++ Sbjct: 87 ---DPVSAAIVTIIIN----SGAYIAEITRGAILSINKGFKEASLAMGLSQRSTLWYVIM 139 Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376 P A+R +IP L +Q++ +K++SL + +G A+L G II +A+E+ IYL Sbjct: 140 PLALRRMIPALGNQWIISIKDTSLFIVIGVAELTRQGQEIIAGNFRALEVWTAVALIYLL 199 Query: 377 LSIMIALFMNRLNAKI 392 +++ ++ + +L +I Sbjct: 200 VTLCLSFLLKQLEKRI 215 Score = 37.0 bits (84), Expect = 4.8, Method: Compositional matrix adjust. Identities = 19/60 (31%), Positives = 34/60 (56%) Query: 99 LAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPI 158 ++ SG++ +IG L G R ++ I ++VE+ R P +V + F+Y ++ VLPI Sbjct: 25 ISLSGLLGGFVIGLLAGTCRALGGRITKTISLIFVELIRGTPIMVQVMFIYFALPMVLPI 84 >gi|302539849|ref|ZP_07292191.1| His/Glu/Gln/Arg/opine family amino acid ABC transporter, permease [Streptomyces hygroscopicus ATCC 53653] gi|302457467|gb|EFL20560.1| His/Glu/Gln/Arg/opine family amino acid ABC transporter, permease [Streptomyces himastatinicus ATCC 53653] Length = 330 Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 41/128 (32%), Positives = 76/128 (59%), Gaps = 3/128 (2%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I L+ + AA+ AE+VR G+++V GQ +AA ALGL + R +++PQAMRSI+P + Sbjct: 181 IGLTLHEAAYAAEVVRGGILSVDSGQTQAAQALGLGRWRTLRRIVVPQAMRSIVPTAGNM 240 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA---LFMNR 387 + LK +S+ + DL+ + NQT Q I ++++ Y++++ +++ ++ R Sbjct: 241 LIGTLKGTSIVSVLAVHDLLYSVQLVYNQTYQVIPLLMVATLWYIAVTTVLSAGQFYVER 300 Query: 388 LNAKIALK 395 A+ A + Sbjct: 301 HYARGAAR 308 >gi|223985124|ref|ZP_03635220.1| hypothetical protein HOLDEFILI_02526 [Holdemania filiformis DSM 12042] gi|223962946|gb|EEF67362.1| hypothetical protein HOLDEFILI_02526 [Holdemania filiformis DSM 12042] Length = 219 Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 41/127 (32%), Positives = 68/127 (53%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F S I S T A+ AE +R+ + +VPRGQ+EA GLT+ + R ++LPQAMR+ Sbjct: 90 FPSAVIVFSVNTGAYAAETIRAAIESVPRGQLEAGYCAGLTYAQTMRRIILPQAMRTAFA 149 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PL++ ++L+K++SLA + ++ I +T + + IYL ++ Sbjct: 150 PLSNSLISLVKDTSLAANITILEMFMASQRIAARTYEPFALYCEVGLIYLLFCTVLTALQ 209 Query: 386 NRLNAKI 392 RL K+ Sbjct: 210 RRLETKM 216 >gi|295099959|emb|CBK89048.1| amino acid ABC transporter membrane protein, PAAT family (TC 3.A.1.3.-) [Eubacterium cylindroides T2-87] Length = 242 Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 51/178 (28%), Positives = 92/178 (51%), Gaps = 15/178 (8%) Query: 223 YISTFLIF---GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279 +I++F I+ G P +V Y L +PVL F+ G + +S T A Sbjct: 69 WITSFYIWVFRGTPMMVQAMFVYYLL--RPVLQWTPFVAG----------LVIISINTGA 116 Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339 ++AEI+R+G+ +V GQ EAA +LG+T + ++ PQA+++ P + +Q + +K+SS Sbjct: 117 YMAEIIRAGIQSVDNGQNEAAKSLGMTTIQTLIFIVFPQAIKNTFPSIGNQLIVNIKDSS 176 Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 + +G +L ++ Q IE L+ IYL L+ + + +N L ++ + K Sbjct: 177 MLNVIGVTELYFQTTSVAGSNYQYIETFLVSALIYLVLTTLASFLLNFLEGRLDEERK 234 >gi|289550425|ref|YP_003471329.1| Glutamate ABC transporter, periplasmic glutamine-binding protein [Staphylococcus lugdunensis HKU09-01] gi|289179957|gb|ADC87202.1| Glutamate ABC transporter, periplasmic glutamine-binding protein [Staphylococcus lugdunensis HKU09-01] Length = 485 Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 33/85 (38%), Positives = 61/85 (71%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+ IAL ++A+IAEI+R+G+ AV +GQ EAA LGL + + + V++PQA+++I+P Sbjct: 355 FICGIIALIINSSAYIAEIIRAGINAVDKGQTEAAQCLGLNYNQTMKNVIMPQAIKNILP 414 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLV 350 L ++++ L+K SS+ +G ++++ Sbjct: 415 ALGNEFVTLIKESSIVSTIGVSEVM 439 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 23/67 (34%), Positives = 40/67 (59%) Query: 83 SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142 + Y + + G VNT L+ G+I ++GTL+ +LS K+++WI Y+E+ R P L Sbjct: 275 TKYGSFFVKGIVNTIILSAIGVIIGAVLGTLIALAKLSKIKIISWIAAAYIEIIRGTPLL 334 Query: 143 VVIFFLY 149 V +F ++ Sbjct: 335 VQVFIVF 341 >gi|257784235|ref|YP_003179452.1| polar amino acid ABC transporter, inner membrane subunit [Atopobium parvulum DSM 20469] gi|257472742|gb|ACV50861.1| polar amino acid ABC transporter, inner membrane subunit [Atopobium parvulum DSM 20469] Length = 449 Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 50/183 (27%), Positives = 98/183 (53%), Gaps = 20/183 (10%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG---QFNFIGGSTVSPEFMSLYIAL 273 +AL ++YI+ L+ G P + I Y L F P+L N +G +I + Sbjct: 264 RALAVVYIN--LLRGTPFFLQI---YILFFGLPMLNINLDTNLLG-----------FIVV 307 Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333 + ++A+++EI R+G+ ++P+GQ EAA +LG+ + +++PQ +R +IPPLTS ++ Sbjct: 308 AINSSAYLSEIFRAGIQSIPQGQYEAASSLGMNRFQTMTFIIIPQTIRRVIPPLTSDFIT 367 Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393 K++SL +VG +L+ + TG + +F YL++++ + + + ++ Sbjct: 368 SYKDTSLLSSVGVMELMMFAKNLTTSTGNMTPYMTAALF-YLAITLPLIKVVGSIEKRME 426 Query: 394 LKE 396 E Sbjct: 427 QSE 429 >gi|239834625|ref|ZP_04682953.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium LMG 3301] gi|239822688|gb|EEQ94257.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium LMG 3301] Length = 223 Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 50/138 (36%), Positives = 80/138 (57%), Gaps = 7/138 (5%) Query: 247 DKPVLGQ--FNFIG----GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300 + P L Q F F G G T+S E ++ +A++ AA+ AEIVR G+ ++ GQ+EA Sbjct: 67 NTPFLVQLFFIFFGMPSLGVTLSAEQAAI-LAMTLNCAAYAAEIVRGGVESIKAGQIEAG 125 Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 ALGL R ++ A+R++ P L SQ++ ++ NSSL ++ +L VG I ++T Sbjct: 126 KALGLHTFDIYRFIIFRPAIRAVYPALCSQFILMMLNSSLVASISAEELTYVGQMIDSET 185 Query: 361 GQAIEIILIWMFIYLSLS 378 ++ EI + IYL+LS Sbjct: 186 FRSFEIYFVLGVIYLALS 203 >gi|226313903|ref|YP_002773799.1| L-cystine ABC transporter permease protein [Brevibacillus brevis NBRC 100599] gi|226096853|dbj|BAH45295.1| L-cystine ABC transporter permease protein [Brevibacillus brevis NBRC 100599] Length = 231 Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 61/205 (29%), Positives = 110/205 (53%), Gaps = 18/205 (8%) Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248 I + +F +G++L++ T L+R K + Y+S +I G P LV + + + + Sbjct: 38 IAIAAFFIGLILAVL-TALARLSGIKPLIGIARFYVS--IIRGTPLLVQL---FIIFYGL 91 Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308 P +G + P S I S A+ +E+VR+ ++++ +GQ EAA +LG+T+ Sbjct: 92 PSIGLM-------IDP-IPSAIIGFSLSVGAYSSEVVRAAILSIQKGQWEAAYSLGMTYW 143 Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI---- 364 +A R V+LPQA R IPPL++ +++L+K++SLA V ++ ++ T + + Sbjct: 144 QALRRVVLPQAARVSIPPLSNSFISLVKDTSLASVVLVPEMFRKAQEVVAATYEPLLVYA 203 Query: 365 EIILIWMFIYLSLSIMIALFMNRLN 389 E LI+ I LSI+ N+L+ Sbjct: 204 EAALIYWVICFVLSIIQDRIENKLD 228 >gi|238798540|ref|ZP_04642018.1| Polar amino acid ABC transporter, inner membrane subunit [Yersinia mollaretii ATCC 43969] gi|238717627|gb|EEQ09465.1| Polar amino acid ABC transporter, inner membrane subunit [Yersinia mollaretii ATCC 43969] Length = 220 Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 53/176 (30%), Positives = 94/176 (53%), Gaps = 18/176 (10%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 V F +G+V+ L + SR G+ +YIS F G P L + L + L + Sbjct: 32 VAGFFIGVVIYLMESGRSR-----LGRGFARVYISLFR--GTPVLAQVLLCFYLPGE--- 81 Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 +G S P +++ +AL+ TAA+ ++I+RSG A+P GQ+EAA GL+ R+ Sbjct: 82 ------LGLSL--PGYLAAVLALTLNTAAYQSQILRSGFEAIPPGQLEAAAMCGLSSRQT 133 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 + +PQ +R +P L S+ ++++K S++ + DL+ VG + + T + +E+ Sbjct: 134 LWHIQIPQVLRLTLPSLISELIDVIKASAVVSVIAITDLMRVGQQLASATYRPLEV 189 >gi|313622667|gb|EFR93034.1| L-cystine transport system permease protein TcyM [Listeria innocua FSL J1-023] Length = 236 Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 64/208 (30%), Positives = 105/208 (50%), Gaps = 15/208 (7%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 +F F++ I+L+L R +H + + + Y+S F P ++ I L Y P+ Sbjct: 32 LFGFIIAILLTLI-----RMYHVRFLEPIAKFYVSFFR--STPAILHIMLIY---LGIPL 81 Query: 251 LGQF---NFIGGSTVS--PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305 + F +F G + + P + + IALS A++ EI+RSG+IAV GQMEAA ++G Sbjct: 82 IVDFLSKSFDLGISANKIPVVVFVIIALSFTAGAYLTEILRSGIIAVDIGQMEAAYSMGY 141 Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365 TH +A R VLLPQA + +P T+ + L +S+A V ++ + + + +E Sbjct: 142 THGQAIRKVLLPQAFMTSLPNFTNLCIGFLHTTSIAAIVAVPEITGMATIVASDNYAFLE 201 Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIA 393 + IY L+I+I L IA Sbjct: 202 AFIGAALIYWFLTILIEAINYILEKNIA 229 >gi|290473278|ref|YP_003466144.1| putative high-affinity glutamine ABC transporter membrane protein [Xenorhabdus bovienii SS-2004] gi|289172577|emb|CBJ79346.1| putative high-affinity glutamine transport protein (ABC superfamily, membrane) [Xenorhabdus bovienii SS-2004] Length = 249 Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 37/136 (27%), Positives = 80/136 (58%), Gaps = 1/136 (0%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 PE ++ AL+ T+A++A V++G++A+ GQ A ++LG + ++LPQA+R + Sbjct: 94 PEITTVVCALALITSAYLAHGVKAGILAIGEGQWRAGLSLGFNRWEVLWYIVLPQALRMM 153 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG-QAIEIILIWMFIYLSLSIMIA 382 +P +Q++ L+K++SLA VG A+L + + N++ +E+ L +Y + + + Sbjct: 154 VPSFINQWIALIKDTSLAYIVGVAELSFLATQVNNRSMVYPMEVFLFVALVYFVMCLSLE 213 Query: 383 LFMNRLNAKIALKEKK 398 L N + + +++ ++ Sbjct: 214 LIANSVARRFSMQRQR 229 >gi|239834033|ref|ZP_04682361.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium LMG 3301] gi|239822096|gb|EEQ93665.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium LMG 3301] Length = 218 Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 47/140 (33%), Positives = 73/140 (52%), Gaps = 1/140 (0%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G ++P +++ IAL+ + +AF+ EI R + AVP GQ EAA ALGL + R V+LPQ Sbjct: 80 GLGINP-WIAATIALTLHASAFLGEIWRGCIDAVPPGQREAATALGLRYYNRMRYVILPQ 138 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378 A R + P + L+K +SLA +GF +L G I N T + IY L Sbjct: 139 AARISVAPTVGFLVQLIKGTSLAAIIGFTELTRQGQIINNATFSPFMVFGTVAAIYFVLC 198 Query: 379 IMIALFMNRLNAKIALKEKK 398 +++ R+ A+ + + Sbjct: 199 WPLSILARRMEARFSRATAR 218 >gi|170724280|ref|YP_001751968.1| polar amino acid ABC transporter inner membrane subunit [Pseudomonas putida W619] gi|169762283|gb|ACA75599.1| polar amino acid ABC transporter, inner membrane subunit [Pseudomonas putida W619] Length = 273 Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 44/119 (36%), Positives = 72/119 (60%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IALS A+++EI R+G+I V GQ AA+ALG+ + LPQAMR+IIPP +Q Sbjct: 146 IALSLNYGAYLSEIFRAGIIGVAVGQRHAALALGMRPVAIFWHITLPQAMRTIIPPSANQ 205 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 ++++LK+SSL +G +++ + + + + +E++ IY LSI++ L RL Sbjct: 206 FISMLKDSSLISVMGVWEVMFLAQSYGRSSYRYLEMLTTAAVIYWVLSILLELAQARLE 264 >gi|119717235|ref|YP_924200.1| polar amino acid ABC transporter, inner membrane subunit [Nocardioides sp. JS614] gi|119537896|gb|ABL82513.1| amino acid ABC transporter membrane protein, PAAT family [Nocardioides sp. JS614] Length = 264 Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 73/216 (33%), Positives = 113/216 (52%), Gaps = 29/216 (13%) Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLI---ALKYQL 244 K V +F GI L+L L R + + L +YI F GLP LV+I AL L Sbjct: 63 KYTVIAFAGGIALALVLA-LMRLSPLRLYRWLATIYIEFFR--GLPALVVIIFMALGVPL 119 Query: 245 HFD--KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302 F P G T+ M+L + + A++AE +R+G+ AVP+GQ EAA + Sbjct: 120 AFGWTPP---------GGTIGAGLMALIMV----SGAYMAETLRAGIQAVPKGQREAAQS 166 Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA----DLVSVGGT-II 357 LG+ V+LPQA+R +IPPLT++++ L+K++SL VG +L S G +I Sbjct: 167 LGMGGFWTMVTVVLPQAVRIVIPPLTNEFILLVKDTSLLYVVGMQYDQVELTSFGQQGLI 226 Query: 358 NQTGQA--IEIILIWMFIYLSLSIMIALFMNRLNAK 391 N + + + I L+++ I + S ++A F+ R K Sbjct: 227 NYSNASPLLAIALVYLVISIPASQLVA-FLERRQQK 261 Score = 39.7 bits (91), Expect = 0.82, Method: Compositional matrix adjust. Identities = 25/63 (39%), Positives = 37/63 (58%), Gaps = 6/63 (9%) Query: 89 ILVGFVNTFW---LAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145 IL+G NT +AF+G I ++ L+ RLS +L W+ +Y+E FR +P LVVI Sbjct: 54 ILIGAKNTVKYTVIAFAGGIALALVLALM---RLSPLRLYRWLATIYIEFFRGLPALVVI 110 Query: 146 FFL 148 F+ Sbjct: 111 IFM 113 >gi|170017622|ref|YP_001728541.1| ABC-type amino acid transport system, permease component [Leuconostoc citreum KM20] gi|169804479|gb|ACA83097.1| ABC-type amino acid transport system, permease component [Leuconostoc citreum KM20] Length = 213 Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 39/129 (30%), Positives = 74/129 (57%), Gaps = 1/129 (0%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P F + IA A++AEI R GL AVPRGQ +AA LGL + ++LPQ ++ + Sbjct: 82 PRFEAAAIAFIINYGAYLAEIFRGGLQAVPRGQYDAAKVLGLNKVQTFFKIILPQVIKIV 141 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 +P ++ +NL+K++SL +G D++ G ++ + +L+ M IYL ++ ++ + Sbjct: 142 VPSFGNEIINLVKDTSLVYVIGLGDILRAGNIAASRDVTLVPYLLVGM-IYLLMTAIVTV 200 Query: 384 FMNRLNAKI 392 + + +++ Sbjct: 201 LLKQSESRL 209 >gi|187478360|ref|YP_786384.1| ABC transporter permease [Bordetella avium 197N] gi|115422946|emb|CAJ49475.1| ABC transporter, permease protein [Bordetella avium 197N] Length = 217 Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 35/134 (26%), Positives = 78/134 (58%), Gaps = 1/134 (0%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P+F + +A + AA+ AEI R+G+++V RGQ E + LG+++ + R ++LPQ ++ + Sbjct: 85 PDFPAAIVAFALNYAAYFAEIFRAGILSVDRGQYEGSKVLGMSYLQTMRRIVLPQMVQRV 144 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 +PP++++ + L+K++SL + D++ I+ + ++ F YL +++++ Sbjct: 145 LPPMSNETITLVKDTSLIYVLALNDILRTARGIVQRDFTTTPFLVAAAF-YLLMTLVLTW 203 Query: 384 FMNRLNAKIALKEK 397 F L + A ++ Sbjct: 204 FFQHLEKRYAKYDE 217 >gi|222081156|ref|YP_002540519.1| amino acid ABC transporter [Agrobacterium radiobacter K84] gi|221725835|gb|ACM28924.1| amino acid ABC transporter [Agrobacterium radiobacter K84] Length = 219 Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 42/137 (30%), Positives = 79/137 (57%), Gaps = 1/137 (0%) Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316 + G ++P ++ +I L+ Y A+F +EI+R G+++V GQ +A A+G+ + R V++ Sbjct: 83 LSGIELTPA-VAAFITLTLYGASFYSEIIRGGIVSVDAGQWDAGRAIGMRRHQLMRRVIM 141 Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376 PQA+R ++PPL +Q + LKN+SL + DL+ G I + + + +E + IY Sbjct: 142 PQALRRMLPPLVNQSVLQLKNTSLLSVLAVPDLLYQGQLITSASYRPLETYTMIAVIYFI 201 Query: 377 LSIMIALFMNRLNAKIA 393 + + + L A++A Sbjct: 202 ILFPLTRLAHGLEARMA 218 >gi|186477119|ref|YP_001858589.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia phymatum STM815] gi|184193578|gb|ACC71543.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia phymatum STM815] Length = 218 Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 75/239 (31%), Positives = 123/239 (51%), Gaps = 30/239 (12%) Query: 169 MFLNNRGLSFPTL------TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222 MFL N P L T++ A FV S +LG+VL+L ++SR+ T Sbjct: 1 MFLQNAIDFLPILLKGAVITIEITACAFVLSSILGLVLALL--KVSRNRAAST------- 51 Query: 223 YISTF--LIFGLPTLVLIALKYQLHFDKPVLG-QFNFIGGSTVSPEFMSLYIALSCYTAA 279 + ST LI GLP +V + + ++F P LG Q + F + I L +A Sbjct: 52 FGSTVINLIRGLPIIVQL---FYIYFVLPDLGVQLS---------AFQAGVIGLGIAYSA 99 Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339 + AE R+G+ A+ GQ+EAA A+G+ R V+LPQA R +PP + + LLK+SS Sbjct: 100 YQAENFRAGIEAIDHGQIEAAHAIGMRGPLIMRRVVLPQAFRIALPPYGNTLVMLLKDSS 159 Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 +A + A++ G I + T Q + + + +YL LS+ + +N++ ++AL++ + Sbjct: 160 VASTITVAEITRAGQLIASSTFQNMTVYTLVALLYLVLSLPLMFGVNQIGKRLALRKSR 218 >gi|312882237|ref|ZP_07741983.1| ABC amino acid transporter permease component [Vibrio caribbenthicus ATCC BAA-2122] gi|309370081|gb|EFP97587.1| ABC amino acid transporter permease component [Vibrio caribbenthicus ATCC BAA-2122] Length = 223 Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 54/172 (31%), Positives = 97/172 (56%), Gaps = 14/172 (8%) Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281 LYIS F G P LV + L L++ P + F F+ G F + I L+ + AA++ Sbjct: 57 LYISFFR--GTPLLVQLFL---LYYGLPQI--FPFLVGLNA---FSAAVIGLTLHFAAYM 106 Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341 AE +R+ +I + R QMEA++++G+T +A + V+LPQA R +P L + +++++K++SLA Sbjct: 107 AESIRAAIIGIDRSQMEASLSIGMTKLQAMKRVILPQATRVALPSLMNYFIDMIKSTSLA 166 Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN----RLN 389 +G A++++ + + + E L IY + +++ N RLN Sbjct: 167 FTLGVAEIMAKAQMEASSSFRFFEAFLAVALIYWGVVVLLTQIQNWAEYRLN 218 >gi|34498437|ref|NP_902652.1| amino-acid transport system permease ABC transporter protein [Chromobacterium violaceum ATCC 12472] gi|34104291|gb|AAQ60650.1| probable amino-acid transport system permease ABC transporter protein [Chromobacterium violaceum ATCC 12472] Length = 226 Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 37/113 (32%), Positives = 66/113 (58%) Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338 A+ +E++R+ + +VPR Q EAA +LG++ +A R +LPQA R +PPL + +++L+K++ Sbjct: 102 AYTSEVIRAAISSVPRAQWEAAYSLGMSWSQAMRRTILPQAGRVAVPPLANSFISLVKDT 161 Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 SLA + ++ I T + + + L IYL LS ++ RL + Sbjct: 162 SLAAVLTVPEMFQAAQRIAATTYEPLLLYLETALIYLLLSTVLTWLQERLEKR 214 >gi|296159866|ref|ZP_06842687.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. Ch1-1] gi|295889849|gb|EFG69646.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. Ch1-1] Length = 248 Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 52/163 (31%), Positives = 83/163 (50%), Gaps = 24/163 (14%) Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286 F+ FGLP+L +H D E + +A++ A+ EIVR Sbjct: 75 FVFFGLPSL-------GIHID-----------------EVQAAILAMTVNLGAYAIEIVR 110 Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346 +G+ ++ RGQ++AA ALGL R+ R V+LPQA+ ++ P L SQ L ++ S++ + Sbjct: 111 AGIDSISRGQVQAAQALGLHGRQVFRYVVLPQAIANVFPALLSQVLIVMLGSAVVSQISV 170 Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 DL I ++ ++ E LI YL LSI++ +NRL Sbjct: 171 PDLTYAANFIQSRNFRSFESYLIITATYLLLSIVLRQILNRLG 213 >gi|224823797|ref|ZP_03696906.1| polar amino acid ABC transporter, inner membrane subunit [Lutiella nitroferrum 2002] gi|224604252|gb|EEG10426.1| polar amino acid ABC transporter, inner membrane subunit [Lutiella nitroferrum 2002] Length = 219 Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 63/229 (27%), Positives = 112/229 (48%), Gaps = 26/229 (11%) Query: 177 SFPTLTMDTNAKIF------VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230 + P L T +F V +LG V++L R++R PLL ++ Sbjct: 10 ALPVLIKGTGYTVFFALSTMVLGLLLGFVVAL--VRIAR-----VPLLAPLLAFYVSVMR 62 Query: 231 GLPTLVLIALKYQLHFDKPVLG-QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289 G P LV I + +++ P +G +F + +S L+ AA+++E +R + Sbjct: 63 GTPLLVQI---FVIYYGLPSVGIEFEPVTAGVLS---------LTLNVAAYLSESLRGAI 110 Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349 V RGQ +AA +LGL +A R V+ PQA+R +P L + ++L+K++SL + ++L Sbjct: 111 AGVERGQWDAAQSLGLNWWQAMRFVVAPQALRLAVPSLANSLISLIKDTSLVSVITVSEL 170 Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 + +I QT Q + + L+ IY +LS + RL ++A ++ Sbjct: 171 MMATKDVIAQTFQPLPLYLMAAAIYWALSALFEQVQKRLELRLAHAYRR 219 >gi|260462071|ref|ZP_05810316.1| polar amino acid ABC transporter, inner membrane subunit [Mesorhizobium opportunistum WSM2075] gi|259032318|gb|EEW33584.1| polar amino acid ABC transporter, inner membrane subunit [Mesorhizobium opportunistum WSM2075] Length = 224 Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 56/155 (36%), Positives = 86/155 (55%), Gaps = 18/155 (11%) Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFN 255 +G+V+SL R + K + L + Y F LP LV++ L Y + P LG Sbjct: 41 IGLVISLL-----RLYAPKPLRWLAVGYTDIFR--ALPVLVVLILIY---YALPFLG--- 87 Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315 I S+ + + I +S Y+A E+ RSG+ ++PRGQ EA+ ALGL R V+ Sbjct: 88 -IRLSSWASAVTAFAIIMSAYSA----EVFRSGIESIPRGQFEASQALGLPFLLTLRKVV 142 Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 LPQA+R +IPP+TS +++ K++SLA V +L+ Sbjct: 143 LPQAIRVVIPPMTSNCVSMFKDTSLASTVALPELL 177 Score = 37.7 bits (86), Expect = 2.9, Method: Compositional matrix adjust. Identities = 23/67 (34%), Positives = 36/67 (53%) Query: 83 SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142 +S A+L GF+NT L + IG ++ RL A K + W+ Y ++FR +P L Sbjct: 14 ASSLPALLRGFLNTLLLGILSIGIGIPIGLVISLLRLYAPKPLRWLAVGYTDIFRALPVL 73 Query: 143 VVIFFLY 149 VV+ +Y Sbjct: 74 VVLILIY 80 >gi|290580620|ref|YP_003485012.1| putative amino acid ABC transporter permease [Streptococcus mutans NN2025] gi|254997519|dbj|BAH88120.1| putative amino acid ABC transporter permease protein [Streptococcus mutans NN2025] Length = 230 Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 33/82 (40%), Positives = 57/82 (69%) Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 AA I+E+ +S +AVP+GQ+EA +++GLT + R +LLPQ + +P +T+ LNL+K+ Sbjct: 109 AASISEVFKSAYLAVPKGQLEAGLSIGLTGFQTFRRILLPQTFQIALPNITTAILNLMKD 168 Query: 338 SSLAVAVGFADLVSVGGTIINQ 359 ++LA +G D++ G II++ Sbjct: 169 AALAYTIGLVDVMGAGNLIISR 190 >gi|222082422|ref|YP_002541787.1| amino acid ABC transporter [Agrobacterium radiobacter K84] gi|221727101|gb|ACM30190.1| amino acid ABC transporter [Agrobacterium radiobacter K84] Length = 592 Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 41/133 (30%), Positives = 79/133 (59%), Gaps = 3/133 (2%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + ++ L+ +AF AEIVR G+++V +GQ+EAA ALGL+ R+ ++LPQAMRSI+P Sbjct: 166 FAAAFLGLTLNQSAFFAEIVRGGILSVDQGQLEAASALGLSRRRQAFRIVLPQAMRSILP 225 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL---IWMFIYLSLSIMIA 382 ++ + L K++S+ + +L I + + I +++ +W I +++ + Sbjct: 226 TGFNEIIGLAKSTSMVYVLALPELFYTVQVIYRRNLEVIPLLMVATVWYLIIMTVLSIAQ 285 Query: 383 LFMNRLNAKIALK 395 ++ R +K A++ Sbjct: 286 YYIERYFSKGAVR 298 >gi|86147173|ref|ZP_01065489.1| amino acid ABC transproter, permease protein [Vibrio sp. MED222] gi|218708096|ref|YP_002415717.1| putative amino-acid ABC transporter permease PatM [Vibrio splendidus LGP32] gi|85835057|gb|EAQ53199.1| amino acid ABC transproter, permease protein [Vibrio sp. MED222] gi|218321115|emb|CAV17065.1| Probable amino-acid ABC transporter permease protein patM [Vibrio splendidus LGP32] Length = 223 Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 53/169 (31%), Positives = 96/169 (56%), Gaps = 11/169 (6%) Query: 183 MDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY 242 + T ++ + ++LSL + R F L LYIS F G P LV + L Sbjct: 19 LGTTMEMATWGLFFALILSLILANI-RVFKIPVLDQLSQLYISFFR--GTPLLVQLFL-- 73 Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302 L++ P + F ++ G F + I L+ + AA++AE +R+ +I + R QMEA+++ Sbjct: 74 -LYYGLPQV--FPWMVGLDA---FSAAVIGLTLHFAAYMAESIRAAIIGIDRSQMEASLS 127 Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 +G+T +A R V+LPQA R +P L + +++++K++SLA +G A++++ Sbjct: 128 VGMTTSQAMRRVILPQATRVALPSLMNYFIDMIKSTSLAFTLGVAEIMA 176 >gi|295704150|ref|YP_003597225.1| sulfur-containing amino acid ABC transporter permease TcyL [Bacillus megaterium DSM 319] gi|294801809|gb|ADF38875.1| sulfur-containing amino acid ABC transporter, permease protein TcyL [Bacillus megaterium DSM 319] Length = 232 Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 60/209 (28%), Positives = 106/209 (50%), Gaps = 7/209 (3%) Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248 I + S V+G L LF L R + + +YIS + G P L+ + L + + Sbjct: 27 ILIASLVIGSTLGLFIA-LPRIYKVPVLSQIAAVYIS--FMRGTPILIQLFLVF---YGI 80 Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308 P L Q I S ++P + + I S TAA +E++R + +V +GQ EAA ++G++ + Sbjct: 81 PALLQLIHIDVSRMAP-LVFVIITYSLSTAASFSEMMRGAINSVDKGQTEAAYSIGMSGK 139 Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368 + ++LPQA P + + LK++SLA +G D++ G TII T A+E+ + Sbjct: 140 QTFTRIVLPQAFVVAFPNFGNLVIGSLKDTSLAFTIGVMDMMGRGDTIIAATAHAVEVYI 199 Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKEK 397 IY ++I++ F + K+ ++ Sbjct: 200 ALAIIYYLVAIILEKFFVKSEQKLQKHDQ 228 >gi|190895141|ref|YP_001985434.1| putative amino acid ABC transporter permease [Rhizobium etli CIAT 652] gi|190700802|gb|ACE94884.1| probable amino acid ABC transporter, permease protein [Rhizobium etli CIAT 652] Length = 216 Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 44/123 (35%), Positives = 68/123 (55%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I L+ +++AF+ EI R G+ AVP GQ EAA ALGL +R V+LPQA + +P Sbjct: 91 IGLTAHSSAFLGEIWRGGIEAVPLGQTEAARALGLPYRHRMLDVVLPQAFKISLPATIGF 150 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 + L+K +SL +GF +L G I N T Q + + + IY +L ++L L Sbjct: 151 LVGLVKGTSLVAIIGFTELTRAGQIISNNTFQPLIVFGMVGAIYFALCWPLSLLSGHLEK 210 Query: 391 KIA 393 +++ Sbjct: 211 RMS 213 >gi|330469203|ref|YP_004406946.1| polar amino acid ABC transporter inner membrane subunit [Verrucosispora maris AB-18-032] gi|328812174|gb|AEB46346.1| polar amino acid abc transporter, inner membrane subunit [Verrucosispora maris AB-18-032] Length = 326 Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 45/133 (33%), Positives = 77/133 (57%), Gaps = 11/133 (8%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF---------IGGSTVSPEFM 267 +A+P L ++ ++FG L+ +++ L FD+ + F + F+ Sbjct: 112 RAVPRLVLA--ILFGNLGLLWSRIEFGLPFDRQIGALFGVQDFQARLFGFSARDLLTGFV 169 Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327 + +AL AA++AEIVR+G+ +V GQ EAA ALG+T + R ++LPQAMR I+PP Sbjct: 170 AGMLALGLSEAAYMAEIVRAGIQSVDEGQTEAAQALGMTQGQILRRIVLPQAMRVIVPPT 229 Query: 328 TSQYLNLLKNSSL 340 ++ + +LK++SL Sbjct: 230 GNETIAMLKDTSL 242 >gi|309806886|ref|ZP_07700873.1| putative glutamine ABC transporter, permease protein GlnP [Lactobacillus iners LactinV 03V1-b] gi|308166752|gb|EFO68944.1| putative glutamine ABC transporter, permease protein GlnP [Lactobacillus iners LactinV 03V1-b] Length = 244 Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 55/175 (31%), Positives = 89/175 (50%), Gaps = 30/175 (17%) Query: 191 VFSFVLGIVLSL---FATRLSRH---FHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244 + SF+LG+ L + ++ H F + LPLL I F FGLP Sbjct: 32 ILSFILGLFLGIVRYLKIKVISHIVGFIVDILRNLPLLLIIFFAYFGLP----------- 80 Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304 Q + T + IAL + A +AEIVRSG+ AV +GQ+E A++ G Sbjct: 81 --------QLGIVTNVTCAA-----IIALVVFEGAMLAEIVRSGIGAVNKGQLEGALSNG 127 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359 +T+ +A V++PQA+ +IP + SQ+++L+K++SLA + +L+ I +Q Sbjct: 128 MTYAQAMYHVVVPQALHFMIPAILSQFVSLIKDTSLATIIVLPELLYHAQIIYSQ 182 >gi|162447510|ref|YP_001620642.1| ABC transporter permease [Acholeplasma laidlawii PG-8A] gi|161985617|gb|ABX81266.1| ABC-type transport system, permease component [Acholeplasma laidlawii PG-8A] Length = 225 Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 42/171 (24%), Positives = 97/171 (56%), Gaps = 6/171 (3%) Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287 +I G P LV + L Y + PV+ G+ F+ +AL ++A+ +E R+ Sbjct: 61 IIRGTPLLVQVMLIYAI-VKLPVMTVLGMDFGA-----FLLGMVALIINSSAYASETFRA 114 Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347 G++++ +GQ EA ++LG+T + +++PQA+++I+P L ++++ L+K +S+ + +G + Sbjct: 115 GILSIEKGQKEAGLSLGMTEKSTMLHIIMPQAIKNIMPSLGNEFVTLIKETSIFMYLGIS 174 Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 +L+ + T + E+ ++ +Y L+ + M++L ++ +++K Sbjct: 175 ELMYSAQIVKTSTYRTKEVYIVTALLYFVLTFTTSKLMSKLEKRMRKQDEK 225 Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust. Identities = 27/91 (29%), Positives = 48/91 (52%), Gaps = 5/91 (5%) Query: 82 DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141 D Y +L G + T LA ++ T+I + RLS +K++ +I YVE+ R P Sbjct: 8 DLFYVKTLLQGVLITIVLALIAVLMGTLIAVIPTYFRLSKHKILNFIGGSYVEIIRGTPL 67 Query: 142 LVVIFFLYKSVLSVLPIPDHSIV-LPFGMFL 171 LV + +Y +++ +P +++ + FG FL Sbjct: 68 LVQVMLIY----AIVKLPVMTVLGMDFGAFL 94 >gi|121608290|ref|YP_996097.1| polar amino acid ABC transporter inner membrane subunit [Verminephrobacter eiseniae EF01-2] gi|121552930|gb|ABM57079.1| polar amino acid ABC transporter, inner membrane subunit [Verminephrobacter eiseniae EF01-2] Length = 512 Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 51/167 (30%), Positives = 84/167 (50%), Gaps = 7/167 (4%) Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291 LP LVL+ Y L Q G +S F + AL AFIAEI R G++ Sbjct: 67 LPLLVLLVFTYNLP-------QVFPASGVLLSDPFYAGLTALVVSETAFIAEIHRGGILG 119 Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 VP GQ+EA ALG+ R++++PQA+R +P L+++++ + K +SL + A+++ Sbjct: 120 VPPGQIEAGRALGIGRAGIQRMIVIPQALRIALPALSNEFITIAKMTSLVSVISLAEILL 179 Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 VG + Q E +L F Y+ + + + L A + + +K Sbjct: 180 VGQRLYTQNFLVFETMLAVAFYYVLIVTVFDKLLGALEAHMNILRRK 226 >gi|294084019|ref|YP_003550776.1| amino acid ABC transporter permease [Candidatus Puniceispirillum marinum IMCC1322] gi|292663591|gb|ADE38692.1| ABC-type amino acid transport system, permease component [Candidatus Puniceispirillum marinum IMCC1322] Length = 379 Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 40/134 (29%), Positives = 82/134 (61%), Gaps = 7/134 (5%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I ++ + +A++AE++R GL +P+GQ+EAA A GLT+ K T L+++PQ ++ IP + + Sbjct: 246 IMVTFFASAYMAEVIRGGLAGIPKGQIEAAQASGLTYWKTTYLIVMPQVLKISIPGIVNT 305 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTII---NQTGQAIEI-ILIWMFIYL---SLSIMIAL 383 ++ L K+++L + +G D++ +G + + N G A E+ I + +F ++ +S A Sbjct: 306 FIGLFKDTTLVLIIGMFDVLGMGRSSLADPNWNGLAREVYIFVAIFFFICCYGMSYYSAY 365 Query: 384 FMNRLNAKIALKEK 397 +L+ + ++K Sbjct: 366 LERKLDTENKFQKK 379 >gi|75761726|ref|ZP_00741667.1| Cystine transport system permease protein [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|74490780|gb|EAO54055.1| Cystine transport system permease protein [Bacillus thuringiensis serovar israelensis ATCC 35646] Length = 234 Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 48/157 (30%), Positives = 92/157 (58%), Gaps = 14/157 (8%) Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244 T + + +F++GI+L+ T L+R + + + +Y+S +I G P LV + + + Sbjct: 35 TTIPLTLITFIIGIILATL-TALARISGSRILQWIARIYVS--IIRGTPLLVQL---FII 88 Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304 + P L V P + + + S A+ +EI+R+ ++++P+GQ EAA +G Sbjct: 89 FYGLPTLN-------IEVEP-YTAAVVGFSLNVGAYASEIIRASILSIPKGQWEAAYTIG 140 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341 +T+ +A + V+LPQA R IPPL++ +++L+K++SLA Sbjct: 141 MTYPQALKRVILPQATRVSIPPLSNTFISLVKDTSLA 177 Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust. Identities = 15/41 (36%), Positives = 26/41 (63%) Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 I+ TL R+S ++++ WI R+YV + R P LV +F ++ Sbjct: 49 ILATLTALARISGSRILQWIARIYVSIIRGTPLLVQLFIIF 89 >gi|227552460|ref|ZP_03982509.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus faecium TX1330] gi|227178406|gb|EEI59378.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus faecium TX1330] Length = 237 Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 59/221 (26%), Positives = 110/221 (49%), Gaps = 41/221 (18%) Query: 185 TNAKIFVFSFV----LGIVLSLFATRLSRHFHEKT---------GKALPLLYISTFLIFG 231 T K+F+F+ + LGI+L+L LS HF + PLL F+ +G Sbjct: 41 TTLKLFLFTLIGSLPLGIILAL---GLSLHFKPLRYFLQTYVWIMRGTPLLLQLIFVFYG 97 Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291 LPT+ ++ FD+ F + IA AA+ AEI R G+ + Sbjct: 98 LPTIGIV-------FDR-----------------FEAALIAFILNYAAYFAEIFRGGIQS 133 Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 +P+GQ EAA L L+ + +++PQ + ++P + ++ +NL+K+SSL +G D++ Sbjct: 134 IPQGQYEAAQVLQLSPFQTVTKIVIPQVTKIVLPSVGNEVINLVKDSSLIYILGLGDVMR 193 Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 G + + + ++ + + IYL+L+ ++ + M ++ K+ Sbjct: 194 AGKIAMERDATLLPLLGVAI-IYLTLTGILTIVMKQVEGKL 233 >gi|110598078|ref|ZP_01386357.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Chlorobium ferrooxidans DSM 13031] gi|110340337|gb|EAT58831.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Chlorobium ferrooxidans DSM 13031] Length = 476 Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 51/179 (28%), Positives = 92/179 (51%), Gaps = 13/179 (7%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 +AL +YI F G P LV + L+F PV+G P +++ + L Sbjct: 300 RALCTVYIEFFR--GTPVLVQLLF---LYFGLPVIG--------ITLPGWLTAIVGLGLN 346 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 AA+ +++ R+ A+P Q + A +LG+ A R ++ PQA R +PP+T+ ++ L K Sbjct: 347 YAAYESQVYRTAFQAIPERQWQVAYSLGMHPLLAFRRIIFPQAFRIALPPMTNDFVALFK 406 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395 ++S A A+ +L + + N T + I L+ YL++S+ +A + ++L K+ K Sbjct: 407 DTSTAFAIAVWELATAYRELANATQSYLGIGLVVCCYYLAMSLPLAHYAHKLEQKLQRK 465 Score = 43.1 bits (100), Expect = 0.069, Method: Compositional matrix adjust. Identities = 23/54 (42%), Positives = 30/54 (55%) Query: 96 TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 T LAF MI A I+G + G+ + L +C VY+E FR P LV + FLY Sbjct: 270 TVLLAFGAMIIAVILGIPLAVGQSNGGPLTRALCTVYIEFFRGTPVLVQLLFLY 323 >gi|86360206|ref|YP_472095.1| amino acid ABC transporter permease [Rhizobium etli CFN 42] gi|86284308|gb|ABC93368.1| probable amino acid ABC transporter, permease protein [Rhizobium etli CFN 42] Length = 229 Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 41/119 (34%), Positives = 69/119 (57%) Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 AA+ AE++R L+AVP+G++EA A GL+ K TR + LP+A+R +P + + + LK Sbjct: 111 AAYEAEVLRGALLAVPKGELEAGRAFGLSPWKLTRRIWLPRAIRIALPTIAGEIVMQLKA 170 Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 + LA V DL +V + T E +L+ YL+L+ +IA + L A++ ++ Sbjct: 171 TPLAFTVTVMDLYAVANKVRQDTLLVYEPLLVVTLFYLALTAVIARVLRGLEAQVPVRR 229 >gi|27383229|ref|NP_774758.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] gi|27356403|dbj|BAC53383.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] Length = 220 Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 61/204 (29%), Positives = 105/204 (51%), Gaps = 17/204 (8%) Query: 195 VLGIVLSLFAT--RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252 VLG+V LF LSR K + + L +I F T +L+ L + ++ P+L Sbjct: 32 VLGLVFGLFGAFGSLSRL---KAVRLVALTFIEAFRC----TPILVQLIW-FYYALPILA 83 Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312 G ++P S +ALS Y +F +EI+R G++++ +GQ EA ALG+T +A R Sbjct: 84 ------GVEMTPITASA-LALSLYGGSFYSEIIRGGIVSIDKGQSEAGAALGMTPGQAMR 136 Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372 ++LPQA++ +IP L +Q + KN+SL + DLV + + + +E Sbjct: 137 RIVLPQAIKRMIPALMNQSIIQFKNTSLVSVLAVPDLVYQSQVAAHDSYRPLETYTAVAV 196 Query: 373 IYLSLSIMIALFMNRLNAKIALKE 396 Y ++ I + + + R ++A+ E Sbjct: 197 AYAAILIPLTIIVRRGEKRLAVGE 220 >gi|289647160|ref|ZP_06478503.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. aesculi str. 2250] Length = 324 Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 66/199 (33%), Positives = 101/199 (50%), Gaps = 15/199 (7%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF--DK 248 VFS +LG L+L RLS AL YI F +P L+++ + Y + D Sbjct: 96 VFSIILGTALAL--ARLS---GSPLLAALAWGYIWFFR--SMPALLVLIILYNFAYLYDH 148 Query: 249 PVLG----QFNFIGGSTVS--PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302 VLG F STV +F + LS AA+ AEI+R GLI V GQ EAA A Sbjct: 149 IVLGVPFTDLVFAEWSTVDVLSQFTVAVLGLSLMQAAYTAEIIRGGLIGVDAGQHEAAAA 208 Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362 LGL + ++LPQA+RSI+P ++ + L+K +S+ + +L I N+T Sbjct: 209 LGLPASRRVFRIILPQALRSILPSGFNEIIGLVKGTSIVYVLALPELFYTVQVIYNRTQA 268 Query: 363 AIEIILIWMFIYLSLSIMI 381 I ++++ YL +++++ Sbjct: 269 VIPLLIVATVWYLIITMLL 287 >gi|229078176|ref|ZP_04210751.1| Amino acid ABC transporter [Bacillus cereus Rock4-2] gi|228705122|gb|EEL57533.1| Amino acid ABC transporter [Bacillus cereus Rock4-2] Length = 207 Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 48/157 (30%), Positives = 92/157 (58%), Gaps = 14/157 (8%) Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244 T + + +F++GI+L+ T L+R + + + +Y+S +I G P LV + + + Sbjct: 8 TTIPLTLITFIIGIILATL-TALARISGSRILQWIARIYVS--IIRGTPLLVQL---FII 61 Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304 + P L V P + + + S A+ +EI+R+ ++++P+GQ EAA +G Sbjct: 62 FYGLPTLN-------IEVEP-YTAAVVGFSLNVGAYASEIIRASILSIPKGQWEAAYTIG 113 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341 +T+ +A + V+LPQA R IPPL++ +++L+K++SLA Sbjct: 114 MTYPQALKRVILPQATRVSIPPLSNTFISLVKDTSLA 150 Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust. Identities = 15/41 (36%), Positives = 26/41 (63%) Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 I+ TL R+S ++++ WI R+YV + R P LV +F ++ Sbjct: 22 ILATLTALARISGSRILQWIARIYVSIIRGTPLLVQLFIIF 62 >gi|157692904|ref|YP_001487366.1| ABC transporter ATP-binding protein [Bacillus pumilus SAFR-032] gi|157681662|gb|ABV62806.1| ABC superfamily ATP binding cassette transporter, membrane protein [Bacillus pumilus SAFR-032] Length = 230 Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 46/164 (28%), Positives = 85/164 (51%), Gaps = 29/164 (17%) Query: 193 SFVLGIVLSLFATRLSR------HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246 F+LGI+L+L + + F+ + PL+ + FGLP L L +Q+ Sbjct: 44 GFILGILLTLCKISVFKPLIWLADFYTSIFRGTPLVLQLLIIYFGLPQL----LGFQID- 98 Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306 ++ + A + +AA+++EI+R+G+ A+ +GQ EAA+ALG+ Sbjct: 99 ------------------QYWAAVAAFTLNSAAYVSEIIRAGINAIDKGQKEAAVALGIP 140 Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 + K + +LLPQA ++I P L ++ + L K S++ +G D++ Sbjct: 141 YAKMMKDLLLPQAFKNISPALVNETITLTKESAIVTVIGLGDVM 184 >gi|187777535|ref|ZP_02994008.1| hypothetical protein CLOSPO_01126 [Clostridium sporogenes ATCC 15579] gi|187774463|gb|EDU38265.1| hypothetical protein CLOSPO_01126 [Clostridium sporogenes ATCC 15579] Length = 213 Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 36/116 (31%), Positives = 69/116 (59%), Gaps = 1/116 (0%) Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 A++AE R+G+ ++ +GQ+EAA LG T+ + +++PQA+R++IPP+ ++ +NL+K+ Sbjct: 98 GAYLAETFRAGIESIDKGQVEAAKVLGFTYNQTMFKIIVPQAIRNVIPPICNESINLIKD 157 Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393 S+L A+G D++ ++ + I I IYL ++ + + L K A Sbjct: 158 SALVAAIGIGDMLRAAKEVVTR-DFTITPFFIAAAIYLLITAFLVIIFRTLEKKYA 212 >gi|32490938|ref|NP_871192.1| hypothetical protein WGLp189 [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] gi|25166144|dbj|BAC24335.1| gltJ [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] Length = 240 Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 38/111 (34%), Positives = 65/111 (58%) Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 +LS +++ ++ E +++GL A+ +GQ +AA + G + +L+PQ +++ P+ QY Sbjct: 121 SLSIFSSVYLVEELQTGLNAISKGQKDAAKSQGFKKWYIYKKILIPQGIKNAWQPMIGQY 180 Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382 LNLLK SSL A+GF +L I + AIE + F+YL L +I+ Sbjct: 181 LNLLKLSSLTSAIGFGELTYSINQIESYNAHAIEAFAVGTFLYLILGYLIS 231 >gi|319794877|ref|YP_004156517.1| polar amino acid ABC transporter, inner membrane subunit [Variovorax paradoxus EPS] gi|315597340|gb|ADU38406.1| polar amino acid ABC transporter, inner membrane subunit [Variovorax paradoxus EPS] Length = 217 Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 40/121 (33%), Positives = 67/121 (55%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +AL+ YT+AF+ EI R + ++P+GQ EA+ +L L+ + R V+LPQA++ I P Sbjct: 91 VALTLYTSAFLTEIWRGCVASIPKGQWEASGSLALSFGEQMRHVILPQAVKIAIAPTVGF 150 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 + ++K ++LA +GF +L G I N T Q + +Y L ++L+ L Sbjct: 151 LVQVIKGTALASVIGFVELTKAGSMISNATFQPFVVFSCVALLYFVLCFPVSLYAKNLER 210 Query: 391 K 391 K Sbjct: 211 K 211 >gi|218457946|ref|ZP_03498037.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium etli Kim 5] Length = 161 Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 40/95 (42%), Positives = 59/95 (62%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 ++++ IA + + +AF+ EI R + AVP+GQ EAA ALGL + R V+LPQA++ +P Sbjct: 30 WLAVAIAFTLHASAFLGEIWRGSIEAVPKGQSEAANALGLHYVSRMRDVILPQALKISMP 89 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 + L+K +SLA VGF +L G I NQT Sbjct: 90 ATIGFLVQLIKGTSLAAIVGFIELTRAGQIISNQT 124 >gi|15835024|ref|NP_296783.1| amino acid ABC transporter, permease protein [Chlamydia muridarum Nigg] gi|270285190|ref|ZP_06194584.1| amino acid ABC transporter, permease protein [Chlamydia muridarum Nigg] gi|270289209|ref|ZP_06195511.1| amino acid ABC transporter, permease protein [Chlamydia muridarum Weiss] gi|301336586|ref|ZP_07224788.1| amino acid ABC transporter, permease protein [Chlamydia muridarum MopnTet14] gi|7190447|gb|AAF39262.1| amino acid ABC transporter, permease protein [Chlamydia muridarum Nigg] Length = 214 Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 65/200 (32%), Positives = 103/200 (51%), Gaps = 14/200 (7%) Query: 193 SFVLGIVLSL-FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251 S V G VL T SR+F + K L Y+ + G P + I + Y F P L Sbjct: 25 SLVCGFVLGWGIGTVNSRYFPCRIAKFLGNFYVMA--VRGTPLFIQILIVY---FGLPSL 79 Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311 + N +SP L IAL+ +AA+++E VR G+ A+P Q EAA LG + Sbjct: 80 IKVN------LSPLVAGL-IALTFNSAAYLSENVRGGINAIPIQQWEAAKVLGYKASQIF 132 Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371 +L PQ ++I+P LT+++++L+K SS+ + VG +L V I+ + +E+ LI Sbjct: 133 WHILYPQVFKNILPSLTNEFVSLIKESSILMVVGVPELTKVTKDIVARELNPMEMYLICA 192 Query: 372 FIYLSLSIMIALFMNRLNAK 391 +YL ++ + F RL+ K Sbjct: 193 GLYLVMTSAFSYFA-RLSEK 211 >gi|289626489|ref|ZP_06459443.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|330868339|gb|EGH03048.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 324 Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 66/199 (33%), Positives = 101/199 (50%), Gaps = 15/199 (7%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF--DK 248 VFS +LG L+L RLS AL YI F +P L+++ + Y + D Sbjct: 96 VFSIILGTALAL--ARLS---GSPLLAALAWGYIWFFR--SMPALLVLIILYNFAYLYDH 148 Query: 249 PVLG----QFNFIGGSTVS--PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302 VLG F STV +F + LS AA+ AEI+R GLI V GQ EAA A Sbjct: 149 IVLGVPFTDLVFAEWSTVDVLSQFTVAVLGLSLMQAAYTAEIIRGGLIGVDAGQHEAAAA 208 Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362 LGL + ++LPQA+RSI+P ++ + L+K +S+ + +L I N+T Sbjct: 209 LGLPASRRVFRIILPQALRSILPSGFNEIIGLVKGTSIVYVLALPELFYTVQVIYNRTQA 268 Query: 363 AIEIILIWMFIYLSLSIMI 381 I ++++ YL +++++ Sbjct: 269 VIPLLIVATVWYLIITMLL 287 >gi|145593976|ref|YP_001158273.1| polar amino acid ABC transporter, inner membrane subunit [Salinispora tropica CNB-440] gi|145303313|gb|ABP53895.1| polar amino acid ABC transporter, inner membrane subunit [Salinispora tropica CNB-440] Length = 235 Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 65/192 (33%), Positives = 100/192 (52%), Gaps = 17/192 (8%) Query: 212 HEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK-PVLG-QFNFIGGSTVSPEFMSL 269 + T + LPL + F FGLP AL F + P L F+ +G T P F Sbjct: 54 YVNTFRNLPLTIVMFFAAFGLP-----ALGSNADFLRIPGLDLVFSRLG--TDLPYFRFA 106 Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329 IAL YT+AF+ E +RSG+ AVP GQ EAA +LGLT + R V+LPQ+ + + PL S Sbjct: 107 LIALVLYTSAFVCEALRSGVNAVPAGQAEAARSLGLTFIQNLRHVVLPQSWTASVVPLGS 166 Query: 330 QYLNLLKNSSLAVAVGF----ADLVSVGGTIINQTGQAIEIILIWMFI-YLSLSIMIALF 384 + ++KNS+L +GF DL + + G+ + I + I YL +++ + Sbjct: 167 VIIAMIKNSAL---IGFFGVIGDLSQTADQLTSAGGEPFIPVAIGISIGYLIMTVPLGAL 223 Query: 385 MNRLNAKIALKE 396 ++R+ + A+ Sbjct: 224 LDRIERRQAVAR 235 >gi|20804071|emb|CAD31274.1| PUTATIVE AMINO-ACID ABC TRANSPORTER PERMEASE PROTEIN [Mesorhizobium loti R7A] Length = 293 Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 57/181 (31%), Positives = 91/181 (50%), Gaps = 13/181 (7%) Query: 218 ALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT 277 AL Y S F GLP L+ I Y ++ P LG V S +ALS Sbjct: 126 ALASFYTSFFR--GLPLLIQI---YLIYLGLPQLG--------IVINAVPSGILALSLCV 172 Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 A++ EI R+G+ ++ RGQ EA+ ++G R ++LPQA+ IIPP+ + ++ +LK+ Sbjct: 173 GAYMTEIFRAGIQSIDRGQWEASRSIGFGFGLTIRKIILPQALPVIIPPMGNTFIAMLKD 232 Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 SSL +G +L + TI T +E+++ IY LS + + +RL A + Sbjct: 233 SSLVSVLGVWELTFLARTIGQPTFHHMEMLITAAMIYWILSACLEVLQSRLEHHFARSKV 292 Query: 398 K 398 + Sbjct: 293 R 293 >gi|42779691|ref|NP_976938.1| amino acid ABC transporter, permease protein [Bacillus cereus ATCC 10987] gi|42735608|gb|AAS39546.1| amino acid ABC transporter, permease protein [Bacillus cereus ATCC 10987] Length = 217 Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 36/120 (30%), Positives = 70/120 (58%) Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 ALS + I EIVR L ++P+GQ+EA ++G+ ++ + VL+PQA+R +IP + + Sbjct: 96 ALSLWGITEIGEIVRGALQSLPKGQVEAGKSIGMNKKQLYQYVLIPQAIRRMIPATINIF 155 Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 + +++ +SL V +G +++ G I+ +TG+A I Y L ++++ +L + Sbjct: 156 IRIIQTTSLTVLIGVTEVIKAGQQIVERTGEAFLIYGCLFIFYFLLCYPLSIWSRKLETR 215 >gi|229817229|ref|ZP_04447511.1| hypothetical protein BIFANG_02489 [Bifidobacterium angulatum DSM 20098] gi|229785018|gb|EEP21132.1| hypothetical protein BIFANG_02489 [Bifidobacterium angulatum DSM 20098] Length = 225 Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 69/215 (32%), Positives = 101/215 (46%), Gaps = 27/215 (12%) Query: 191 VFSFVLGIVLSLF------ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244 +FS +LG++L + + R + + K LPL I F++ G Sbjct: 29 LFSTILGVILVMMRISPIPSLRTVAGIYVELFKNLPLTIIMVFMVLG------------- 75 Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYI-ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 Q T S F L + LS YTAAF+ E +RSG+ VP GQ EAA AL Sbjct: 76 -----AYAQLKLTFSDTFSTNFFWLAVTGLSLYTAAFVCESLRSGINTVPLGQAEAARAL 130 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS--VGGTIINQTG 361 GL +A ++LPQ R + PL + ++ LLKNS++A A A S + I Sbjct: 131 GLNFTQAAVQIILPQTFRGSVAPLGNTFIALLKNSTVAAAASVATETSTMMSEMIEYHAD 190 Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 Q + I LI+ F Y+ L I I + L+ K+A++ Sbjct: 191 QIVLIFLIFAFGYVILIIPIGMLTTYLSNKLAVRR 225 >gi|148378448|ref|YP_001252989.1| amino acid ABC transporter permease [Clostridium botulinum A str. ATCC 3502] gi|153931220|ref|YP_001382837.1| His/Glu/Gln/Arg/opine ABC transporter permease [Clostridium botulinum A str. ATCC 19397] gi|153935969|ref|YP_001386404.1| His/Glu/Gln/Arg/opine ABC transporter permease [Clostridium botulinum A str. Hall] gi|148287932|emb|CAL81998.1| binding-protein-dependent transport system,membrane component [Clostridium botulinum A str. ATCC 3502] gi|152927264|gb|ABS32764.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Clostridium botulinum A str. ATCC 19397] gi|152931883|gb|ABS37382.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Clostridium botulinum A str. Hall] Length = 211 Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 37/116 (31%), Positives = 68/116 (58%), Gaps = 1/116 (0%) Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 A++AE R+G+ ++ GQ+EAA LG T+ + +++PQA+R++IPP+ ++ +NL+K+ Sbjct: 96 GAYLAETFRAGIESIDEGQVEAAKVLGFTYNQTMFKIIVPQAIRNVIPPICNESINLIKD 155 Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393 S+L A+G D++ ++ + I I IYL ++ + L L K A Sbjct: 156 SALVAAIGIGDMLRAAKEVVTR-DFTITPFFIAAAIYLLITAFLVLIFRTLEKKYA 210 >gi|307316994|ref|ZP_07596435.1| polar amino acid ABC transporter, inner membrane subunit [Sinorhizobium meliloti AK83] gi|306897082|gb|EFN27827.1| polar amino acid ABC transporter, inner membrane subunit [Sinorhizobium meliloti AK83] Length = 384 Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 32/88 (36%), Positives = 59/88 (67%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 +F+ I +S + +A++AE+VR GL A+P+GQ E A +LGL+ + ++LPQA++ +I Sbjct: 247 KFLRALIGVSLFASAYMAEVVRGGLQAIPKGQYEGADSLGLSFWQKMGFIVLPQALKLVI 306 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSV 352 P + + ++ L K++SL +G DL+ + Sbjct: 307 PGIVNTFIGLFKDTSLVSIIGMFDLLGI 334 >gi|294498360|ref|YP_003562060.1| putative amino acid ABC transporter permease [Bacillus megaterium QM B1551] gi|294348297|gb|ADE68626.1| putative amino acid ABC transporter, permease protein [Bacillus megaterium QM B1551] Length = 233 Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 54/179 (30%), Positives = 100/179 (55%), Gaps = 21/179 (11%) Query: 217 KALPLLYISTFLI-FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSC 275 + PLL + FL+ FGLP L+L+ +H D + F L IA S Sbjct: 64 RCTPLL-VQLFLVYFGLPQLLLL-----VHIDINSWSRVTF------------LVIAFSL 105 Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335 +TAA ++E++RS +++ +GQ EAA ++G+ + ++ R ++LPQA + +P L + ++LL Sbjct: 106 HTAAPLSEVIRSAYLSIDKGQFEAAYSIGMNYFQSLRRIILPQAFVAALPNLGNATISLL 165 Query: 336 KNSSLAVAVGFADLVSVGGTII-NQTGQAI-EIILIWMFIYLSLSIMIALFMNRLNAKI 392 K+++LA ++G D++ I+ N G + EI + +Y S+ I+I + ++ L + Sbjct: 166 KDTALAFSIGIIDIMGQVRLILGNNYGIGMFEIYVTISLVYWSMCIVIEIIVSYLEKHL 224 >gi|251791766|ref|YP_003006487.1| polar amino acid ABC transporter inner membrane subunit [Dickeya zeae Ech1591] gi|247540387|gb|ACT09008.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya zeae Ech1591] Length = 252 Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 50/184 (27%), Positives = 95/184 (51%), Gaps = 10/184 (5%) Query: 177 SFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV 236 +FP + A V S + G+ ++ T L G A LL + +P ++ Sbjct: 17 TFPDGPLGGAALTLVLSLMAGLTSAVLGTVLGVALAMLRGWAGGLLALVLGFFRAIPVIM 76 Query: 237 LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296 LI Y F P++ + PE ++ AL+ +A++A V++G++A+ RGQ Sbjct: 77 LIFWTY---FLLPMVFGVDI-------PEITTVVCALALIASAYLAHGVKAGIVAIGRGQ 126 Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356 +A ++LGL + ++LPQA+R ++P +Q+++L+K++SLA VG +L + + Sbjct: 127 WQAGMSLGLGRWQTLWYIVLPQALRMMVPSFINQWISLIKDTSLAYIVGVGELTFLATQV 186 Query: 357 INQT 360 N++ Sbjct: 187 NNRS 190 >gi|206968421|ref|ZP_03229377.1| amino acid ABC transporter, permease protein [Bacillus cereus AH1134] gi|218895897|ref|YP_002444308.1| amino acid ABC transporter, permease protein [Bacillus cereus G9842] gi|228899529|ref|ZP_04063785.1| Amino acid ABC transporter [Bacillus thuringiensis IBL 4222] gi|228906601|ref|ZP_04070477.1| Amino acid ABC transporter [Bacillus thuringiensis IBL 200] gi|228919695|ref|ZP_04083057.1| Amino acid ABC transporter [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228951348|ref|ZP_04113457.1| Amino acid ABC transporter [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|229068525|ref|ZP_04201826.1| Amino acid ABC transporter [Bacillus cereus F65185] gi|229177391|ref|ZP_04304774.1| Amino acid ABC transporter [Bacillus cereus 172560W] gi|229189061|ref|ZP_04316089.1| Amino acid ABC transporter [Bacillus cereus ATCC 10876] gi|206737341|gb|EDZ54488.1| amino acid ABC transporter, permease protein [Bacillus cereus AH1134] gi|218542540|gb|ACK94934.1| amino acid ABC transporter, permease protein [Bacillus cereus G9842] gi|228594481|gb|EEK52272.1| Amino acid ABC transporter [Bacillus cereus ATCC 10876] gi|228606114|gb|EEK63552.1| Amino acid ABC transporter [Bacillus cereus 172560W] gi|228714667|gb|EEL66541.1| Amino acid ABC transporter [Bacillus cereus F65185] gi|228808285|gb|EEM54795.1| Amino acid ABC transporter [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228840049|gb|EEM85328.1| Amino acid ABC transporter [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228853150|gb|EEM97928.1| Amino acid ABC transporter [Bacillus thuringiensis IBL 200] gi|228860119|gb|EEN04523.1| Amino acid ABC transporter [Bacillus thuringiensis IBL 4222] Length = 209 Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 48/157 (30%), Positives = 92/157 (58%), Gaps = 14/157 (8%) Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244 T + + +F++GI+L+ T L+R + + + +Y+S +I G P LV + + + Sbjct: 10 TTIPLTLITFIIGIILATL-TALARISGSRILQWIARIYVS--IIRGTPLLVQL---FII 63 Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304 + P L V P + + + S A+ +EI+R+ ++++P+GQ EAA +G Sbjct: 64 FYGLPTLN-------IEVEP-YTAAVVGFSLNVGAYASEIIRASILSIPKGQWEAAYTIG 115 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341 +T+ +A + V+LPQA R IPPL++ +++L+K++SLA Sbjct: 116 MTYPQALKRVILPQATRVSIPPLSNTFISLVKDTSLA 152 Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust. Identities = 15/41 (36%), Positives = 26/41 (63%) Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 I+ TL R+S ++++ WI R+YV + R P LV +F ++ Sbjct: 24 ILATLTALARISGSRILQWIARIYVSIIRGTPLLVQLFIIF 64 >gi|254500256|ref|ZP_05112407.1| ABC transporter, permease protein, putative [Labrenzia alexandrii DFL-11] gi|222436327|gb|EEE43006.1| ABC transporter, permease protein, putative [Labrenzia alexandrii DFL-11] Length = 241 Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 45/140 (32%), Positives = 74/140 (52%), Gaps = 4/140 (2%) Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321 V P F + +AL+ YT+A+++E+ R + +VP GQ E ALGL + L++LPQA R Sbjct: 96 VDPWFAA-GLALTLYTSAYLSEVWRGAITSVPLGQHEGGRALGLAFAQIMILIILPQAFR 154 Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW---MFIYLSLS 378 I P + ++K +SLA +GF DL+++G N + +I+ IY SL Sbjct: 155 LAIAPTVGFMVQIIKGTSLAYIIGFHDLMAIGKRWANSPVPGTQPFVIYPMMAMIYFSLC 214 Query: 379 IMIALFMNRLNAKIALKEKK 398 ++L+ L ++ K Sbjct: 215 YPLSLWARHLEKRLGSTSSK 234 >gi|2108227|gb|AAC45330.1| integral membrane protein-like protein [Lactobacillus reuteri] Length = 233 Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 46/160 (28%), Positives = 87/160 (54%), Gaps = 4/160 (2%) Query: 205 TRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP 264 TRLSR + G + L +I++F ++ + L+ + + F P L + Sbjct: 41 TRLSR----QRGPFMILKWIASFYVWLFRSTPLLVQLFIVFFGLPYLRIKGILPHGIKLE 96 Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 F + I S T A+ +E +R+ + +VPRGQ EA A+G+T + ++LPQA+R + Sbjct: 97 PFTAGIITFSLNTGAYASETIRAAISSVPRGQWEAGAAIGMTRLQILWRIILPQALRVAL 156 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364 PPL++ +++L+K++SLA ++ ++ +V I + Q + Sbjct: 157 PPLSNSFISLVKDTSLAASITIMEMFAVSQQIAAENYQPL 196 >gi|15965229|ref|NP_385582.1| general L-amino acid transport permease ABC transporter protein [Sinorhizobium meliloti 1021] gi|307309252|ref|ZP_07588920.1| polar amino acid ABC transporter, inner membrane subunit [Sinorhizobium meliloti BL225C] gi|15074409|emb|CAC46055.1| Probable general L-amino acid transport permease ABC transporter [Sinorhizobium meliloti 1021] gi|306900253|gb|EFN30870.1| polar amino acid ABC transporter, inner membrane subunit [Sinorhizobium meliloti BL225C] Length = 384 Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 32/88 (36%), Positives = 59/88 (67%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 +F+ I +S + +A++AE+VR GL A+P+GQ E A +LGL+ + ++LPQA++ +I Sbjct: 247 KFLRALIGVSLFASAYMAEVVRGGLQAIPKGQYEGADSLGLSFWQKMGFIVLPQALKLVI 306 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSV 352 P + + ++ L K++SL +G DL+ + Sbjct: 307 PGIVNTFIGLFKDTSLVSIIGMFDLLGI 334 >gi|256832815|ref|YP_003161542.1| polar amino acid ABC transporter, inner membrane subunit [Jonesia denitrificans DSM 20603] gi|256686346|gb|ACV09239.1| polar amino acid ABC transporter, inner membrane subunit [Jonesia denitrificans DSM 20603] Length = 313 Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 36/84 (42%), Positives = 60/84 (71%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 +++ +AL+ Y A IAE+VRSG+ +P GQ EAA+A+G+T ++ R V LPQA+ +++P Sbjct: 141 LVAVVVALTLYNGAVIAELVRSGVHGLPSGQREAALAVGMTRGQSIRSVELPQALLAMLP 200 Query: 326 PLTSQYLNLLKNSSLAVAVGFADL 349 L SQ++ +LK+S+L V + +L Sbjct: 201 SLVSQFVVILKDSALGQIVTYPEL 224 Score = 46.2 bits (108), Expect = 0.009, Method: Compositional matrix adjust. Identities = 33/123 (26%), Positives = 57/123 (46%), Gaps = 17/123 (13%) Query: 23 RVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSD 82 R ++ I+ ALL + +W ++N AG + P Sbjct: 16 RARIVAANIVGALLAVALLVWMGIQLHN-----------------AGQLRGELWAPLVEA 58 Query: 83 SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142 S++ ++ G +NT A + AT++GTL G GRL+ + +V W C + VE FR +P L Sbjct: 59 SAWQNFLIPGLINTLVAAALSIAAATVLGTLFGVGRLANSVVVRWTCGIIVEFFRAVPVL 118 Query: 143 VVI 145 +++ Sbjct: 119 IMM 121 >gi|288550479|ref|ZP_05970605.2| general amino acid ABC transporter, permease protein [Enterobacter cancerogenus ATCC 35316] gi|288315400|gb|EFC54338.1| general amino acid ABC transporter, permease protein [Enterobacter cancerogenus ATCC 35316] Length = 323 Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 36/96 (37%), Positives = 61/96 (63%) Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315 F+ T + + + + + +A++AE+VR GL A+P+GQ EAA +L L++ K LV+ Sbjct: 177 FMAEGTTIDKLIRALVGVILFQSAYVAEVVRGGLQALPKGQYEAAESLALSYWKTQGLVI 236 Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 LPQA++ +IP L + + L K++SL + +G DL S Sbjct: 237 LPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFS 272 >gi|156933487|ref|YP_001437403.1| hypothetical protein ESA_01305 [Cronobacter sakazakii ATCC BAA-894] gi|156531741|gb|ABU76567.1| hypothetical protein ESA_01305 [Cronobacter sakazakii ATCC BAA-894] Length = 222 Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 56/207 (27%), Positives = 106/207 (51%), Gaps = 18/207 (8%) Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251 F VLG +L++ RLS + P+ +++ F I LIA + +++ P Sbjct: 32 FGLVLGFLLAMM--RLSPFW--------PVSWLARFYISIFRGTPLIAQLFMIYYGLP-- 79 Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311 QF G + P + I LS TAA+ +E +R+ + ++ +GQ EAA ++G+T + Sbjct: 80 -QF----GIELDP-IPAAMIGLSLNTAAYTSETLRAAISSIDKGQWEAAASIGMTPWQTL 133 Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371 R +LPQA R +PPL + +++L+K++SLA + +L I ++T + + L Sbjct: 134 RRAILPQAARVALPPLGNSFISLVKDTSLAATIQVPELFRQAQLITSRTLEVFTMYLAAS 193 Query: 372 FIYLSLSIMIALFMNRLNAKIALKEKK 398 IY ++ +++ N ++ +E+ Sbjct: 194 LIYWVMATVLSALQNHFENQLNRQERD 220 Score = 41.2 bits (95), Expect = 0.33, Method: Compositional matrix adjust. Identities = 30/97 (30%), Positives = 47/97 (48%), Gaps = 8/97 (8%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G V T L+ GM ++G L+ RLS V+W+ R Y+ +FR P + +F + Sbjct: 15 LLKGAVFTLQLSIGGMFFGLVLGFLLAMMRLSPFWPVSWLARFYISIFRGTPLIAQLFMI 74 Query: 149 YKSV----LSVLPIPDHSIVLPFGMFLNNRGLSFPTL 181 Y + + + PIP I G+ LN + TL Sbjct: 75 YYGLPQFGIELDPIPAAMI----GLSLNTAAYTSETL 107 >gi|15674455|ref|NP_268629.1| putative glutamine-binding periplasmic protein [Streptococcus pyogenes M1 GAS] gi|13621552|gb|AAK33350.1| putative glutamine-binding periplasmic protein [Streptococcus pyogenes M1 GAS] Length = 522 Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 38/109 (34%), Positives = 65/109 (59%) Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 +S T A+++EIVR G+ AV +GQ +AA ALG TH + R ++LPQ +R+I+P ++++ Sbjct: 383 VSINTGAYMSEIVRGGIFAVDKGQFKAATALGFTHGQTMRKIVLPQVVRNILPATGNEFV 442 Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 +K++S+ + +L G T+ QT Q + I IY L+ + Sbjct: 443 INIKDTSVLNVISVVELYFSGNTVATQTYQYFQTFTIIAIIYFVLTFTV 491 >gi|17549154|ref|NP_522494.1| amino acid ABC transporter transmembrane protein [Ralstonia solanacearum GMI1000] gi|17431405|emb|CAD18084.1| probable amino acid transmembrane abc transporter protein [Ralstonia solanacearum GMI1000] Length = 248 Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 49/174 (28%), Positives = 93/174 (53%), Gaps = 8/174 (4%) Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283 + T L++G+ + L+ L ++F P+ FIG F ++ L Y +++E Sbjct: 63 VVTALVYGVRGVPLLMLILWVYFLVPL-----FIGRDVSG--FTTMLCTLVIYEGVYLSE 115 Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343 +VR+G+ A+P+GQMEAA ALG ++ A R+V+LPQA+ +++P + +Q+++ +K ++L Sbjct: 116 VVRAGIEALPKGQMEAARALGHSYLGAMRVVILPQALYNMLPSMLAQFVSTIKETTLGYV 175 Query: 344 VGFADLVSVGGTIINQ-TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 + +L I N + +I + IY ++ + L +IA K Sbjct: 176 INVPELTFAANQINNALLSKPFQIFFLLAVIYFAVCWSLTRAARALEHRIAAKR 229 >gi|116493034|ref|YP_804769.1| ABC-type amino acid transport system, permease component [Pediococcus pentosaceus ATCC 25745] gi|116103184|gb|ABJ68327.1| amino acid ABC transporter membrane protein, PAAT family [Pediococcus pentosaceus ATCC 25745] Length = 216 Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 52/184 (28%), Positives = 85/184 (46%), Gaps = 30/184 (16%) Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLI 229 LS ++T+ V S +LG+ L+L + F + PLL F+ Sbjct: 15 LSGASMTLQVFCWTIVGSLILGVFLALGLVSKFKPFQAIISAYVWLMRGTPLLLQLIFIF 74 Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289 +GLPT+ V P + + +A AA+ AEI R GL Sbjct: 75 YGLPTV------------------------GIVFPRYEAALLAFILNYAAYFAEIFRGGL 110 Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349 +V +GQ EA L +T+ + T+ V+LPQ + ++P + ++ +NL+K+SSL +G DL Sbjct: 111 QSVDKGQYEAGRVLQMTYWQTTKKVILPQVAKIVLPSIGNEVINLVKDSSLVYVIGIGDL 170 Query: 350 VSVG 353 + G Sbjct: 171 LRAG 174 >gi|310766168|gb|ADP11118.1| transport system permease protein [Erwinia sp. Ejp617] Length = 366 Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 34/76 (44%), Positives = 53/76 (69%) Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335 + +A++AE+VR GL A+P+GQ E A +L L + K RLV+LPQA++ +IP L + + L Sbjct: 240 FQSAYVAEVVRGGLQALPKGQYEGAESLALGYWKTQRLVILPQALKLVIPGLVNTIIALF 299 Query: 336 KNSSLAVAVGFADLVS 351 K++SL + +G DL S Sbjct: 300 KDTSLVIIIGLFDLFS 315 >gi|258543562|ref|YP_003188995.1| amino acid ABC transporter permease [Acetobacter pasteurianus IFO 3283-01] gi|256634640|dbj|BAI00616.1| amino acid transport permease protein [Acetobacter pasteurianus IFO 3283-01] gi|256637696|dbj|BAI03665.1| amino acid transport permease protein [Acetobacter pasteurianus IFO 3283-03] gi|256640750|dbj|BAI06712.1| amino acid transport permease protein [Acetobacter pasteurianus IFO 3283-07] gi|256643805|dbj|BAI09760.1| amino acid transport permease protein [Acetobacter pasteurianus IFO 3283-22] gi|256646860|dbj|BAI12808.1| amino acid transport permease protein [Acetobacter pasteurianus IFO 3283-26] gi|256649913|dbj|BAI15854.1| amino acid transport permease protein [Acetobacter pasteurianus IFO 3283-32] gi|256652903|dbj|BAI18837.1| amino acid transport permease protein [Acetobacter pasteurianus IFO 3283-01-42C] gi|256655957|dbj|BAI21884.1| amino acid transport permease protein [Acetobacter pasteurianus IFO 3283-12] Length = 519 Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 45/136 (33%), Positives = 73/136 (53%), Gaps = 24/136 (17%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 + PLL F+ +GLP G +++P F++ ++L Sbjct: 360 RGTPLLIQVLFIFYGLPEF-----------------------GISLTP-FLAGVVSLGMN 395 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 AA+ AE R+GL +V GQMEAA+AL +TH +A R V++PQA R ++P +T+ +++LLK Sbjct: 396 YAAYEAENYRAGLQSVAHGQMEAALALNMTHAQALRYVVVPQAFRLVMPVMTNDFISLLK 455 Query: 337 NSSLAVAVGFADLVSV 352 +SSL + +L Sbjct: 456 DSSLVSVITLTELTQT 471 >gi|225027102|ref|ZP_03716294.1| hypothetical protein EUBHAL_01358 [Eubacterium hallii DSM 3353] gi|224955566|gb|EEG36775.1| hypothetical protein EUBHAL_01358 [Eubacterium hallii DSM 3353] Length = 222 Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 57/212 (26%), Positives = 111/212 (52%), Gaps = 10/212 (4%) Query: 178 FPTLT--MDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235 +PTL + KI + S ++ +V+ +F ++ + + YI +LI G P L Sbjct: 11 YPTLLTGLTMTVKITILSLIIALVIGIFVCLMNIS-SNIVLRGIAKFYI--WLIRGTPML 67 Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295 V + +F P L Q G F + + L+ A+I+EI R + +V +G Sbjct: 68 VQ---AFYFYFALPQLVQ-AVTGSQFRITVFTASLVTLALNAGAYISEIFRGSIESVNKG 123 Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355 QMEAA +LGL++ K+ + ++LPQA+R +P L +Q++ LK+S++ A+G ++++ Sbjct: 124 QMEAARSLGLSYAKSMQKIILPQAVRICLPSLVNQFIITLKDSTILYAIGLSEVMYNAKI 183 Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387 + +T ++ W+ ++ L + + F++R Sbjct: 184 YVGRTMESFA-TYTWVAVFFLLIVTVLSFISR 214 >gi|148555537|ref|YP_001263119.1| polar amino acid ABC transporter inner membrane subunit [Sphingomonas wittichii RW1] gi|148500727|gb|ABQ68981.1| polar amino acid ABC transporter, inner membrane subunit [Sphingomonas wittichii RW1] Length = 362 Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 40/89 (44%), Positives = 56/89 (62%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +A ++A+IAE+VR GL VP GQ E+A ALGL ++LPQA+R + PLTS Sbjct: 231 VAFVLSSSAYIAEVVRGGLQGVPPGQRESARALGLGRSTVLLSIILPQAIRKALAPLTST 290 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQ 359 + ++KNSSL + VG DL+S G +N Sbjct: 291 VVVIIKNSSLVLVVGLFDLLSAGRVSLND 319 >gi|116255277|ref|YP_771110.1| putative permease component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] gi|115259925|emb|CAK03019.1| putative permease component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] Length = 222 Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 41/121 (33%), Positives = 71/121 (58%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IAL A+ EI+R G+ ++P+GQMEA +ALGL + RL++L A+R+I P LTSQ Sbjct: 95 IALGINGGAYAIEIIRGGVQSIPKGQMEAGLALGLHKAQVFRLIILKPALRAIYPSLTSQ 154 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++ L +S+A A+ +L SV I +++ ++ E+ Y +S ++ + +A Sbjct: 155 FVLLTLTTSIASAISAYELTSVSQRIESESFRSFEVYFTVTVFYFVISWLMMRIFAQFSA 214 Query: 391 K 391 + Sbjct: 215 R 215 Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust. Identities = 28/62 (45%), Positives = 38/62 (61%) Query: 88 AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147 ++L+G + TF LA GM+ A +IG A R SA K W+ +VE+ RN P LV IFF Sbjct: 16 SLLLGCLGTFLLAICGMLLAIVIGIGGVALRDSALKPARWLVIAFVELIRNTPFLVQIFF 75 Query: 148 LY 149 +Y Sbjct: 76 IY 77 >gi|28377716|ref|NP_784608.1| glutamine ABC transporter, permease protein [Lactobacillus plantarum WCFS1] gi|254555901|ref|YP_003062318.1| glutamine ABC transporter, permease protein [Lactobacillus plantarum JDM1] gi|300767695|ref|ZP_07077605.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|308179878|ref|YP_003924006.1| glutamine ABC transporter, permease protein [Lactobacillus plantarum subsp. plantarum ST-III] gi|28270549|emb|CAD63453.1| glutamine ABC transporter, permease protein [Lactobacillus plantarum WCFS1] gi|254044828|gb|ACT61621.1| glutamine ABC transporter, permease protein [Lactobacillus plantarum JDM1] gi|300494680|gb|EFK29838.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|308045369|gb|ADN97912.1| glutamine ABC transporter, permease protein [Lactobacillus plantarum subsp. plantarum ST-III] Length = 217 Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 52/190 (27%), Positives = 95/190 (50%), Gaps = 30/190 (15%) Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPT 234 +T++ + + SF++G VL + ++ G + LPL+ I F FGLP Sbjct: 22 VTVEVSVVSIIASFIIGSVLGVLRYVKIKYLSAVVGFVVDIIRNLPLILIIFFTYFGLP- 80 Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294 L F ++ + +A++ + +A +AEI+RSG++AV Sbjct: 81 --------HLGFKPGII---------------FAAILAMTIFESAMLAEIIRSGILAVDY 117 Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354 GQME A A G+++ +A ++ PQA++ IP + SQ+++L+K++SLA + +L++ Sbjct: 118 GQMEGARANGMSYVQALWHIVFPQAIKKTIPTIVSQFISLIKDTSLATIIVLPELLNHAQ 177 Query: 355 TIINQTGQAI 364 I Q I Sbjct: 178 IIYGQNSAYI 187 >gi|253701871|ref|YP_003023060.1| polar amino acid ABC transporter inner membrane protein [Geobacter sp. M21] gi|251776721|gb|ACT19302.1| polar amino acid ABC transporter, inner membrane subunit [Geobacter sp. M21] Length = 339 Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 45/182 (24%), Positives = 89/182 (48%), Gaps = 25/182 (13%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 + PLL F+ +GLP+L G T P F + + L Sbjct: 183 RGTPLLLQLFFIYYGLPSL-----------------------GVTFKP-FTAAILGLGLN 218 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 +A++ EI+R G+ ++ GQMEAA A+G+++ +A R V++PQ + ++PP+ ++++ L+K Sbjct: 219 YSAYLGEIIRGGIQSIEHGQMEAAKAIGMSYWQAMRRVIIPQTYKRLMPPIGNEFIALIK 278 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 +++L + +L+ + N +IL FIYL + + ++ + + E Sbjct: 279 DTALVSTIAMVELMRSADQMFNAYFNVTALILA-AFIYLLFTTIFTFIFEKIEIRAGIYE 337 Query: 397 KK 398 + Sbjct: 338 NR 339 >gi|163793472|ref|ZP_02187447.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [alpha proteobacterium BAL199] gi|159181274|gb|EDP65789.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [alpha proteobacterium BAL199] Length = 205 Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 51/172 (29%), Positives = 86/172 (50%), Gaps = 23/172 (13%) Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279 PLL + F+ FGLP I +++ FDK + S I LS Y A Sbjct: 52 PLLLLIFFVYFGLPA---IGIRF---FDK-----------------YESFVITLSIYAGA 88 Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339 ++ E+ R+GL +VP +EAA A+GL + V+LP R ++P L++ ++L K++S Sbjct: 89 YLTEVFRAGLTSVPERYVEAAKAIGLKPWQTQLYVVLPLTFRIVLPSLSNNLISLFKDTS 148 Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 LA A+ +L I T + +E L +YL+ +IA+ + ++ + Sbjct: 149 LATAIAIPELTFTARQINANTYRVMEAWLTASLLYLATCYLIAIALRQIEKR 200 >gi|325168928|ref|YP_004280718.1| deoxyfructosyl-amino acid ABC-type membrane transporter [Agrobacterium sp. H13-3] gi|325064651|gb|ADY68340.1| deoxyfructosyl-amino acid ABC-type membrane transporter [Agrobacterium sp. H13-3] Length = 502 Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 58/183 (31%), Positives = 97/183 (53%), Gaps = 19/183 (10%) Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ-FNFIGGSTVSPEFMSLYI-ALSCYTAA 279 LY F GLP +V I L +GQ F IG P L I ALS A Sbjct: 67 LYTDIF--RGLPAIVTILL----------IGQGFARIGRELFGPSPYPLGILALSLIAGA 114 Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339 +I EI RSG+ +V RGQMEA AL +++ + RL+++PQ +R ++P L +Q++ +K+SS Sbjct: 115 YIGEIFRSGIQSVDRGQMEACRALSMSYGQGMRLIVVPQGVRRVLPALVNQFIGNVKDSS 174 Query: 340 LAVAVGF----ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395 L +G ++ VG TG ++L +F YL +++ + +N ++ ++ + Sbjct: 175 LVYFLGLLASEREIFRVGQDQAVVTGNLSPLLLAGVF-YLVVTVPLTHVVNAIDNRLRVG 233 Query: 396 EKK 398 +++ Sbjct: 234 KQR 236 >gi|308187188|ref|YP_003931319.1| glutamine transport system permease protein glnP [Pantoea vagans C9-1] gi|308057698|gb|ADO09870.1| Putative glutamine transport system permease protein glnP [Pantoea vagans C9-1] Length = 222 Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 54/196 (27%), Positives = 102/196 (52%), Gaps = 13/196 (6%) Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256 G V+ L A R + K L L+++ LI G P +V + Y F P++ Sbjct: 37 GFVIGLLAGA-CRALGGRITKTLSLIFVE--LIRGTPIMVQVMFIY---FALPMVIPIR- 89 Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316 + P + + + + A+IAEI R ++++ +G EA++A+GL+ R V++ Sbjct: 90 -----IDP-ITAAIVTIVINSGAYIAEITRGAILSINKGFKEASLAMGLSQRSTQWHVIM 143 Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376 P A+R +IP L +Q++ +K++SL + +G A+L G II +A+E+ IYL Sbjct: 144 PLALRRMIPALGNQWIISIKDTSLFIVIGVAELTRQGQEIIAGNFRALEVWTAVAMIYLL 203 Query: 377 LSIMIALFMNRLNAKI 392 +++ ++ + +L +I Sbjct: 204 VTLCLSFLLKQLEKRI 219 Score = 37.0 bits (84), Expect = 4.8, Method: Compositional matrix adjust. Identities = 18/60 (30%), Positives = 35/60 (58%) Query: 99 LAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPI 158 ++ SG++ +IG L GA R ++ + ++VE+ R P +V + F+Y ++ V+PI Sbjct: 29 ISLSGLLGGFVIGLLAGACRALGGRITKTLSLIFVELIRGTPIMVQVMFIYFALPMVIPI 88 >gi|258626080|ref|ZP_05720931.1| amino acid ABC transproter, permease protein [Vibrio mimicus VM603] gi|258581606|gb|EEW06504.1| amino acid ABC transproter, permease protein [Vibrio mimicus VM603] Length = 223 Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 55/171 (32%), Positives = 95/171 (55%), Gaps = 17/171 (9%) Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV-LIAL 240 T++ + VF+ +L +VL+ R F L LYIS F G P LV L L Sbjct: 22 TLEMASWGLVFALILALVLANI-----RVFKVPVLDPLSQLYISFFR--GTPLLVQLFLL 74 Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300 Y L P+L + F + I L+ + AA++AE +R+ +I + R QMEA+ Sbjct: 75 YYGLPQIFPLLVGLD---------AFSAAVIGLTLHFAAYMAESIRAAIIGIDRSQMEAS 125 Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 +++G+T +A R ++LPQA R +P L + +++++K++SLA +G A++++ Sbjct: 126 LSVGMTTSQAMRRIILPQAARVALPSLMNYFIDMIKSTSLAFTLGVAEIMA 176 >gi|237654575|ref|YP_002890889.1| polar amino acid ABC transporter inner membrane subunit [Thauera sp. MZ1T] gi|237625822|gb|ACR02512.1| polar amino acid ABC transporter, inner membrane subunit [Thauera sp. MZ1T] Length = 216 Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 38/133 (28%), Positives = 76/133 (57%), Gaps = 1/133 (0%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P+F + +A + AA+ AEI R+G+ ++ RGQ E A LG ++ + R ++LPQ ++ I Sbjct: 85 PDFPAAIVAFALNYAAYFAEIFRAGIQSIDRGQYEGAKVLGFSYGQTMRRIVLPQVVKRI 144 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 +PP++++ + L+K++SL + DL+ I+ + I+ F YL +++++ Sbjct: 145 LPPMSNETITLVKDTSLIYVLALNDLLRAARGIVQRDFTITPFIVAAAF-YLIMTLVLTW 203 Query: 384 FMNRLNAKIALKE 396 RL + A+ + Sbjct: 204 LFQRLEKRHAVYD 216 >gi|294084529|ref|YP_003551287.1| ABC transporter permease [Candidatus Puniceispirillum marinum IMCC1322] gi|292664102|gb|ADE39203.1| ABC transporter permease protein [Candidatus Puniceispirillum marinum IMCC1322] Length = 221 Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 54/180 (30%), Positives = 97/180 (53%), Gaps = 15/180 (8%) Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST-FLIFGLPTLVLIALKYQLHF 246 ++F+ +LG+ L LF L R K + + ST F+ F T VL+ + + ++ Sbjct: 26 RLFIVCLILGMSLGLFVA-LGRRSRTKAVR-----WASTAFVEFFRNTPVLVQILW-FYY 78 Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306 P+L +SP F++ + +S +AA+ AEI R G+ ++ GQ EAA A+G+ Sbjct: 79 ALPILAPVE------ISP-FIAAILGISLNSAAYSAEIYRGGIQSIEPGQWEAAKAIGMN 131 Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 + R ++LPQA+R I+P LT++ + + K S+LA V + +++ G I + +E+ Sbjct: 132 GLQVLRRIVLPQAIRRIVPALTNRGIEIFKMSTLASVVAYVEMLQQGKLIASLNFNPLEV 191 Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust. Identities = 33/95 (34%), Positives = 42/95 (44%), Gaps = 9/95 (9%) Query: 88 AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147 A+ VG T L +I +G V GR S K V W +VE FRN P LV I + Sbjct: 16 ALAVGLGGTLRLFIVCLILGMSLGLFVALGRRSRTKAVRWASTAFVEFFRNTPVLVQILW 75 Query: 148 LYKSVLSVLPIPDHSIVLPF-----GMFLNNRGLS 177 Y + LPI + PF G+ LN+ S Sbjct: 76 FYYA----LPILAPVEISPFIAAILGISLNSAAYS 106 >gi|153841388|ref|ZP_01993400.1| 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase [Vibrio parahaemolyticus AQ3810] gi|149745487|gb|EDM56734.1| 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase [Vibrio parahaemolyticus AQ3810] Length = 338 Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 49/130 (37%), Positives = 75/130 (57%), Gaps = 20/130 (15%) Query: 186 NAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST----------FLIFGLPTL 235 + + + +FV+G++ ++ + +R+ TG+ P+ I + + G+P Sbjct: 216 GSGVVIAAFVIGLIATISISIWARNKQRLTGQQTPMGRIGLGLLVGLPLLVYFVSGMP-- 273 Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295 I+L+Y P L FNF GG ++ PE +L +ALS YTAAFIAEIVRSG+ AV G Sbjct: 274 --ISLEY------PELKGFNFKGGISIIPELAALLLALSVYTAAFIAEIVRSGINAVSHG 325 Query: 296 QMEAAIALGL 305 Q EAA++LGL Sbjct: 326 QTEAAMSLGL 335 >gi|116494751|ref|YP_806485.1| ABC-type amino acid transport system, permease component [Lactobacillus casei ATCC 334] gi|191638263|ref|YP_001987429.1| Glutamine ABC transporter, permease protein [Lactobacillus casei BL23] gi|227535252|ref|ZP_03965301.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|301066312|ref|YP_003788335.1| amino acid ABC transporter permease [Lactobacillus casei str. Zhang] gi|116104901|gb|ABJ70043.1| amino acid ABC transporter membrane protein, PAAT family [Lactobacillus casei ATCC 334] gi|190712565|emb|CAQ66571.1| Glutamine ABC transporter, permease protein [Lactobacillus casei BL23] gi|227187136|gb|EEI67203.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|300438719|gb|ADK18485.1| ABC-type amino acid transport system, permease component [Lactobacillus casei str. Zhang] gi|327382296|gb|AEA53772.1| ABC transporter, permease protein [Lactobacillus casei LC2W] gi|327385491|gb|AEA56965.1| ABC transporter, permease protein [Lactobacillus casei BD-II] Length = 218 Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 55/189 (29%), Positives = 88/189 (46%), Gaps = 35/189 (18%) Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKAL-----------PLLYI 224 LS +T+ A + S LG++LS+ + K GK L PLL Sbjct: 12 LSGVKMTLGIFAITLIGSIPLGLILSVGLIPKPKSILGKAGKGLLEGYVWVFRGTPLLLQ 71 Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284 F+ +GLP + L+ FD+ F + +A AA+ AEI Sbjct: 72 LMFIFYGLPIIGLV-------FDR-----------------FSAALVAFILNYAAYFAEI 107 Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344 R G A+ GQ EA+ L +T +A R V++PQ ++ ++P + ++ +NL+K+SSL + Sbjct: 108 FRGGFGAIDEGQFEASTVLNMTRWQALRYVVIPQVVKIVLPSIGNEVINLVKDSSLVYVI 167 Query: 345 GFADLVSVG 353 G DL+ G Sbjct: 168 GLGDLLRAG 176 >gi|65318269|ref|ZP_00391228.1| COG0765: ABC-type amino acid transport system, permease component [Bacillus anthracis str. A2012] Length = 232 Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 48/157 (30%), Positives = 92/157 (58%), Gaps = 14/157 (8%) Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244 T + + +F++G++L+ T L+R + + + +Y+S +I G P LV + + + Sbjct: 33 TTIPLTLITFIIGLILATL-TALARISGSRILQWIARIYVS--IIRGTPLLVQL---FII 86 Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304 + P L V P + + I S A+ +EI+R+ ++++P+GQ EAA +G Sbjct: 87 FYGLPTLN-------VEVEP-YTAAVIGFSLNVGAYASEIIRASILSIPKGQWEAAYTIG 138 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341 +T+ +A + V+LPQA R IPPL++ +++L+K++SLA Sbjct: 139 MTYPQALKRVILPQATRVSIPPLSNTFISLVKDTSLA 175 Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust. Identities = 15/41 (36%), Positives = 26/41 (63%) Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 I+ TL R+S ++++ WI R+YV + R P LV +F ++ Sbjct: 47 ILATLTALARISGSRILQWIARIYVSIIRGTPLLVQLFIIF 87 >gi|315641164|ref|ZP_07896242.1| glutamine ABC superfamily ATP binding cassette transporter, permease protein [Enterococcus italicus DSM 15952] gi|315483088|gb|EFU73606.1| glutamine ABC superfamily ATP binding cassette transporter, permease protein [Enterococcus italicus DSM 15952] Length = 231 Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 62/195 (31%), Positives = 101/195 (51%), Gaps = 27/195 (13%) Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF---GL 232 LS +TM + VF V G++L+L K PL ++++ I G Sbjct: 14 LSGSVITMMISVVTIVFGTVFGVILALM----------KRSSIAPLKWVASTYIAVFRGT 63 Query: 233 PTLVLI----ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY---IALSCYTAAFIAEIV 285 P LV I L +Q+ PV IG + +F L+ +ALS + A++AEIV Sbjct: 64 PMLVQILIANGLFHQVVTLPPVT-----IG--VLQIDFSRLFPGILALSLNSGAYVAEIV 116 Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345 R G+ AV GQ EAA +LG+ + R ++ PQA+R+I+P L ++++ L+K+SSL +G Sbjct: 117 RGGINAVNSGQFEAARSLGMNGTQTMRYIIFPQALRNILPSLGNEFIVLIKDSSLLSTLG 176 Query: 346 FADLVSVGGTIINQT 360 +L++ +I + Sbjct: 177 IYELMNSAQIVITSS 191 >gi|218459733|ref|ZP_03499824.1| amino acid ABC transporter ATP-binding protein [Rhizobium etli Kim 5] Length = 272 Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 42/133 (31%), Positives = 77/133 (57%), Gaps = 3/133 (2%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + Y+ L+ +AF AEIVR G+++V GQ+EAA ALGL R+ ++LPQAMRSI+P Sbjct: 78 FAAAYLGLTLNQSAFFAEIVRGGILSVDHGQLEAAAALGLPRRRQAFRIVLPQAMRSILP 137 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL---IWMFIYLSLSIMIA 382 ++ + L K++S+ + +L I + + I +++ +W I +++ + Sbjct: 138 TGFNELIGLAKSTSVVYVLALPELFYTVQVIYRRNLEVIPLLMVATVWYLIIMTVLSVAQ 197 Query: 383 LFMNRLNAKIALK 395 ++ R +K A++ Sbjct: 198 HYIERYFSKGAVR 210 >gi|187919666|ref|YP_001888697.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia phytofirmans PsJN] gi|187718104|gb|ACD19327.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia phytofirmans PsJN] Length = 248 Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 51/163 (31%), Positives = 82/163 (50%), Gaps = 24/163 (14%) Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286 F+ FGLP+L +H D E + +A++ A+ EIVR Sbjct: 75 FVFFGLPSL-------GIHID-----------------EVQAAILAMTVNLGAYAIEIVR 110 Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346 +G+ ++ RGQ++AA ALGL R+ R ++LPQA+ ++ P L SQ L ++ S++ + Sbjct: 111 AGIDSISRGQIQAAQALGLHGRQVFRFIVLPQAIANVFPALLSQVLIVMLGSAVVSQISV 170 Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 DL I ++ ++ E LI YL LSI + +NRL Sbjct: 171 PDLTYAANFIQSRNFRSFESYLIITATYLVLSIALRQILNRLG 213 >gi|296158852|ref|ZP_06841681.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. Ch1-1] gi|295891057|gb|EFG70846.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. Ch1-1] Length = 312 Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 40/122 (32%), Positives = 68/122 (55%) Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316 I + + F + I L+ Y + AEI R G+ AV RGQ EA A+G++ V++ Sbjct: 171 IDTNQIISRFSAAVIGLAMYLGGYSAEIFRGGVSAVDRGQREACKAIGMSDFHTMWHVVM 230 Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376 PQA+R IIPPL ++ + + KN+SL +G+ +L++ I + I ++ + YL+ Sbjct: 231 PQAVRIIIPPLANELITMFKNTSLVTVIGYVELLTTVQLIYATNFETIPLLTVACIWYLA 290 Query: 377 LS 378 L+ Sbjct: 291 LT 292 >gi|227823073|ref|YP_002827045.1| putative transmembrane component of ABC transporter [Sinorhizobium fredii NGR234] gi|227342074|gb|ACP26292.1| putative transmembrane component of ABC transporter [Sinorhizobium fredii NGR234] Length = 222 Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 61/200 (30%), Positives = 96/200 (48%), Gaps = 34/200 (17%) Query: 195 VLGIVLSLFATRLSRHFHEKTGKAL----------PLLYISTFLIFGLPTLVLIALKYQL 244 VLGI++S+ R ++ KA+ P L F+ FGLPT+ Sbjct: 33 VLGILISILLAAARRSRYDLLSKAVAVYVEVIRNTPFLVQLFFIFFGLPTI--------- 83 Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304 G + P ++ +A++ AA+ EIV +GL AVP+GQ EAA+ALG Sbjct: 84 --------------GIRLDP-IVAAILAMTLNMAAYTTEIVGAGLDAVPKGQSEAALALG 128 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364 L + V+LPQA++ I P LTSQ + ++ S++ + +L + +T ++ Sbjct: 129 LRAPQVFIKVVLPQALKVIFPALTSQVVIMMLESAVVSQIAVRELAHEADLLQARTFRSF 188 Query: 365 EIILIWMFIYLSLSIMIALF 384 E L+ IYL LS+ I F Sbjct: 189 ETYLVVTMIYLGLSMAIRRF 208 >gi|218515414|ref|ZP_03512254.1| amino acid ABC transporter ATP-binding protein [Rhizobium etli 8C-3] Length = 549 Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 42/133 (31%), Positives = 77/133 (57%), Gaps = 3/133 (2%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + Y+ L+ +AF AEIVR G+++V GQ+EAA ALGL R+ ++LPQAMRSI+P Sbjct: 124 FAAAYLGLTLNQSAFFAEIVRGGILSVDHGQLEAAAALGLPRRRQAFRIVLPQAMRSILP 183 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL---IWMFIYLSLSIMIA 382 ++ + L K++S+ + +L I + + I +++ +W I +++ + Sbjct: 184 TGFNELIGLAKSTSVVYVLALPELFYTVQVIYRRNLEVIPLLMVATVWYLIIMTVLSVAQ 243 Query: 383 LFMNRLNAKIALK 395 ++ R +K A++ Sbjct: 244 HYIERYFSKGAVR 256 >gi|313107728|ref|ZP_07793910.1| hypothetical protein PA39016_001060055 [Pseudomonas aeruginosa 39016] gi|187939707|gb|ACD38849.1| polar amino acid uptake transporter family protein [Pseudomonas aeruginosa] gi|310880412|gb|EFQ39006.1| hypothetical protein PA39016_001060055 [Pseudomonas aeruginosa 39016] Length = 223 Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 42/129 (32%), Positives = 73/129 (56%) Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329 ++AL AF AE R+G+ AVPR Q++A+ ALGL + T V+LPQA+RS +P L + Sbjct: 95 FLALGLNLTAFNAEAYRAGVQAVPREQLDASTALGLKPWQRTLHVVLPQALRSAVPVLMT 154 Query: 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 + L+ S+L V +DL+ VG ++ + + +E + +Y +LS+ + + L Sbjct: 155 NGIGSLQQSALVAIVAVSDLMYVGKSLATEAYRPLETYTLIALVYFALSLPVGQLVQYLE 214 Query: 390 AKIALKEKK 398 + L ++ Sbjct: 215 RRQDLAVQR 223 >gi|158423073|ref|YP_001524365.1| ABC transporter permease protein [Azorhizobium caulinodans ORS 571] gi|158329962|dbj|BAF87447.1| ABC transporter permease protein [Azorhizobium caulinodans ORS 571] Length = 222 Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 43/121 (35%), Positives = 72/121 (59%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IAL A+ EI+R G+ ++ RGQ+EA +ALGL RL++L A+R++ P LTSQ Sbjct: 95 IALGINGGAYAIEIIRGGVQSISRGQVEAGLALGLHKALVFRLIVLKPALRAVYPSLTSQ 154 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++ L +S+A A+ +L SV I + + ++ E+ F+YL +S M+ F ++A Sbjct: 155 FILLTLTTSIASAISAYELTSVAQRIESDSFRSFEVFGTATFMYLVISWMMMRFFALISA 214 Query: 391 K 391 + Sbjct: 215 R 215 Score = 41.2 bits (95), Expect = 0.28, Method: Compositional matrix adjust. Identities = 26/61 (42%), Positives = 35/61 (57%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G + TF LA GM A +IG R S + V ++ + +VEV RN P LV IFF+ Sbjct: 17 LLAGCLGTFVLALGGMALAIVIGIGGVLLRDSRHAPVRFLVKAFVEVIRNTPFLVQIFFI 76 Query: 149 Y 149 Y Sbjct: 77 Y 77 >gi|153940673|ref|YP_001389816.1| His/Glu/Gln/Arg/opine ABC transporter permease [Clostridium botulinum F str. Langeland] gi|152936569|gb|ABS42067.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Clostridium botulinum F str. Langeland] gi|295317903|gb|ADF98280.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Clostridium botulinum F str. 230613] Length = 211 Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 28/82 (34%), Positives = 57/82 (69%) Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 A++AE R+G+ ++ +GQ+EAA LG T+ + +++PQA+R++IPP+ ++ +NL+K+ Sbjct: 96 GAYLAETFRAGIESIDKGQVEAAKVLGFTYNQTMFKIIVPQAIRNVIPPICNESINLIKD 155 Query: 338 SSLAVAVGFADLVSVGGTIINQ 359 S+L A+G D++ ++ + Sbjct: 156 SALVAAIGIGDMLRAAKEVVTR 177 >gi|153855472|ref|ZP_01996603.1| hypothetical protein DORLON_02617 [Dorea longicatena DSM 13814] gi|149752126|gb|EDM62057.1| hypothetical protein DORLON_02617 [Dorea longicatena DSM 13814] Length = 227 Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 53/190 (27%), Positives = 98/190 (51%), Gaps = 10/190 (5%) Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268 +HF K L +Y+S F G P L+ + L Y + P++ F+ + P+ + Sbjct: 48 QHFRVKILSQLAKVYVSYFR--GTPLLIQLFLFY---YGLPMV--FDVMKRC---PKTFA 97 Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328 L + L +AA+I+E +R + +V +GQ EA+IA GLTH + ++LPQA + IPP+ Sbjct: 98 LVLCLGLNSAAYISESIRGAIESVDKGQYEASIAFGLTHPQMMLKIILPQAAVAAIPPIV 157 Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388 + L+++K SSL + +G D++ + E ++ Y L+I++ + ++ Sbjct: 158 NSCLDIIKMSSLGMTIGIQDIMGEAQLTAATYYKTFETYILAAVFYWILAIVLGVVQKKV 217 Query: 389 NAKIALKEKK 398 I+ +K Sbjct: 218 EKIISSAYQK 227 >gi|329113273|ref|ZP_08242056.1| Inner membrane amino-acid ABC transporter permease protein YecS [Acetobacter pomorum DM001] gi|326697414|gb|EGE49072.1| Inner membrane amino-acid ABC transporter permease protein YecS [Acetobacter pomorum DM001] Length = 519 Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 45/136 (33%), Positives = 73/136 (53%), Gaps = 24/136 (17%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 + PLL F+ +GLP G +++P F++ ++L Sbjct: 360 RGTPLLIQVLFIFYGLPEF-----------------------GISLTP-FLAGVVSLGMN 395 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 AA+ AE R+GL +V GQMEAA+AL +TH +A R V++PQA R ++P +T+ +++LLK Sbjct: 396 YAAYEAENYRAGLQSVAHGQMEAALALNMTHAQALRYVVVPQAFRLVMPVMTNDFISLLK 455 Query: 337 NSSLAVAVGFADLVSV 352 +SSL + +L Sbjct: 456 DSSLVSVITLTELTQT 471 >gi|209551407|ref|YP_002283324.1| polar amino acid ABC transporter inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209537163|gb|ACI57098.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 226 Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 50/170 (29%), Positives = 92/170 (54%), Gaps = 14/170 (8%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 + SF G++L L T ++R F A+ Y+ ++I G P LV + + + + P Sbjct: 28 LLSFAFGLILGLI-TAIARLFGPGPVAAIARFYV--WVIRGTPLLVQL---FVIFYGLPS 81 Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 +G + F + I + A+ +EI+R+ + +VP+GQ EAA ++G++ R+A Sbjct: 82 IG--------ILLDAFPAALIGFTLNIGAYSSEIIRAVISSVPKGQWEAAYSIGMSWRQA 133 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 +LPQA R +PPL++ +++L+K++SLA A+ +L I+ T Sbjct: 134 MSRTILPQAARVAVPPLSNTFISLVKDTSLAAAITVPELFQAAQRIVATT 183 >gi|242279376|ref|YP_002991505.1| polar amino acid ABC transporter inner membrane subunit [Desulfovibrio salexigens DSM 2638] gi|242122270|gb|ACS79966.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio salexigens DSM 2638] Length = 297 Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 37/129 (28%), Positives = 73/129 (56%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P F+S + ++ + A+I EIVR+G+ ++ + Q EA+ ALG R ++LPQA Sbjct: 161 PAFLSGVLTMALFEGAYITEIVRAGIESIDQEQWEASAALGFNRRNQLVHIILPQAFSRS 220 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 +PPL Q+++ +K+SS+ + +L G +++ T + EI + + +Y L+ ++ Sbjct: 221 LPPLAGQFISTIKDSSIVSVISIQELTFAGQELMSATYRTFEIWSLVIIMYFILTFPCSI 280 Query: 384 FMNRLNAKI 392 + +L K+ Sbjct: 281 GVRKLEIKM 289 Score = 43.9 bits (102), Expect = 0.042, Method: Compositional matrix adjust. Identities = 30/93 (32%), Positives = 48/93 (51%), Gaps = 7/93 (7%) Query: 64 LSERAGFEIDQGIVP-----YTSDSS--YATAILVGFVNTFWLAFSGMIPATIIGTLVGA 116 L++ + D ++P Y S+S A + G + T L+ ++ A + GT++G Sbjct: 30 LAQGLNYNWDWSVIPDYIARYDSNSGDWRAGMLTQGLLVTLRLSLWSILLALVAGTIMGM 89 Query: 117 GRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 R+S L+ I YV + RNIPPLV+IF Y Sbjct: 90 WRVSPRPLLRMISSSYVGLVRNIPPLVLIFIFY 122 >gi|150396798|ref|YP_001327265.1| polar amino acid ABC transporter inner membrane subunit [Sinorhizobium medicae WSM419] gi|150028313|gb|ABR60430.1| polar amino acid ABC transporter, inner membrane subunit [Sinorhizobium medicae WSM419] Length = 267 Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 59/215 (27%), Positives = 107/215 (49%), Gaps = 6/215 (2%) Query: 186 NAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV-LIALKYQL 244 A + V + +G+V+ F L++ EK+ + +Y + F GLP L+ L + Y L Sbjct: 56 TASLAVATLPVGLVIGFFIA-LAKQSEEKSLRLAANIYTTIFR--GLPELLTLFIVYYGL 112 Query: 245 H-FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 + L + G ++ F++ IAL +A+ +E++ S A+P GQ EA AL Sbjct: 113 QILVQQFLATVGYDGAVEINA-FVAGMIALGVVFSAYCSEVLLSAFKAIPHGQYEAGDAL 171 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363 GL K RL++LPQ +R +P L + ++ LLK+++L +G D++ G T A Sbjct: 172 GLHRGKTMRLIILPQLIRVALPGLGNLWMALLKDTALVSVIGLPDILRQTGIAARVTKHA 231 Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 E + ++L L+++ ++ + L E + Sbjct: 232 FEFFGVACVLFLVLAMISSIVFSALERSTKRAETR 266 >gi|50086449|ref|YP_047959.1| amino acid ABC transporter ATP-binding protein [Acinetobacter sp. ADP1] gi|49532425|emb|CAG70137.1| putative amino acid transport protein (ABC superfamily, ATP_bind and membrane) [Acinetobacter sp. ADP1] Length = 505 Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 42/136 (30%), Positives = 76/136 (55%), Gaps = 1/136 (0%) Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322 SP F++ IA++ AA+IAEI R GL ++ +GQ+EA ALG+ R +++PQA R Sbjct: 92 SP-FLAGLIAMTLSEAAYIAEIHRGGLTSITKGQIEAGKALGMKSLGIQRFIVIPQAFRV 150 Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382 +P L ++Y++++K +SL + +++ VG + Q +E +L F Y+ + + Sbjct: 151 ALPSLANEYVSIVKLTSLVSVISLTEILLVGQRLYTQNFLVLETMLAVAFYYVLIVTVFG 210 Query: 383 LFMNRLNAKIALKEKK 398 + KI + +K Sbjct: 211 WLIQWFEHKIDVTNRK 226 >gi|269103818|ref|ZP_06156515.1| putative amino acid ABC transporter permease protein [Photobacterium damselae subsp. damselae CIP 102761] gi|268163716|gb|EEZ42212.1| putative amino acid ABC transporter permease protein [Photobacterium damselae subsp. damselae CIP 102761] Length = 223 Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 62/209 (29%), Positives = 110/209 (52%), Gaps = 31/209 (14%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 +F+ L +V++L R+ R + + L LLYIS F G P LV + L Y Sbjct: 31 IFALFLALVIAL--IRIKRIWGLNS---LSLLYISFFR--GTPLLVQLFLFYY------- 76 Query: 251 LGQFNFIGGSTVSPEFMSL------YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304 G V P F+ L I LS + AA++AE +R ++ + Q EA++A+G Sbjct: 77 -------GLPQVIPAFVGLDGYSAAVIGLSLHFAAYMAETIRGAILGIDNSQYEASLAIG 129 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364 ++ ++A R ++LPQAMR +P L + +++++K++SLA A+G ++++ + + + Sbjct: 130 MSEQQAMRRIILPQAMRIALPSLMNYFIDMIKSTSLAFALGVPEIMAKAQMEASSSFRFF 189 Query: 365 E----IILIWMFIYLSLSIMIALFMNRLN 389 E + LI+ I + L+ + L RLN Sbjct: 190 EAFLAVALIYWLIVIVLTRLQTLAETRLN 218 >gi|218671516|ref|ZP_03521186.1| general L-amino acid ABC transporter, permease protein [Rhizobium etli GR56] Length = 339 Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 33/94 (35%), Positives = 62/94 (65%), Gaps = 1/94 (1%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G TV + + I +S + +A++AE++R GL A+P+GQ E A +LGL + + RLV++PQ Sbjct: 196 GWTVD-KLLRAIIGVSIFASAYMAEVIRGGLQAIPKGQFEGADSLGLGYWQKMRLVIMPQ 254 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352 A++ +IP + + ++ + K++SL + DL+ + Sbjct: 255 AIKLVIPGIVNTFIGMFKDTSLVSIISMFDLLGI 288 >gi|146307936|ref|YP_001188401.1| polar amino acid ABC transporter, inner membrane subunit [Pseudomonas mendocina ymp] gi|145576137|gb|ABP85669.1| L-arginine ABC transporter membrane protein / L-ornithine ABC transporter membrane protein [Pseudomonas mendocina ymp] Length = 232 Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 54/167 (32%), Positives = 87/167 (52%), Gaps = 11/167 (6%) Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL----YIALSCYTA 278 ++ T++I G P LV + L Y L QF+ I S + P F S +A + T+ Sbjct: 56 WLYTYVIRGTPMLVQLFLIYY------GLAQFDVIRDSFMWPYFSSATFCACLAFAINTS 109 Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338 A+ AEI+ L A P G++EAA A+G++ K R +LLP A+R +P +++ + +L + Sbjct: 110 AYTAEILAGSLKATPHGEIEAAKAMGMSRAKLYRRILLPSALRRALPQYSNEVIMMLHTT 169 Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS-IMIALF 384 SLA V D+ T+ +Q E + YL L+ I++ LF Sbjct: 170 SLASIVTLIDITGAARTVSSQYYMPFEAFITAGLFYLVLTFILVRLF 216 >gi|16119238|ref|NP_395944.1| deoxyfructosyl-amino acid ABC-type membrane transporter [Agrobacterium tumefaciens str. C58] gi|5257497|gb|AAD41366.1|AF151698_3 GlnP/GlnQ-like protein [Agrobacterium tumefaciens str. C58] gi|15161737|gb|AAK90385.1| Deoxyfructosyl-amino acid ABC-type Membrane Transporter [Agrobacterium tumefaciens str. C58] Length = 502 Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 58/183 (31%), Positives = 97/183 (53%), Gaps = 19/183 (10%) Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ-FNFIGGSTVSPEFMSLYI-ALSCYTAA 279 LY F GLP +V I L +GQ F IG P L I ALS A Sbjct: 67 LYTDIF--RGLPAIVTILL----------IGQGFARIGRELFGPSPYPLGILALSLIAGA 114 Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339 +I EI RSG+ +V RGQMEA AL +++ + RL+++PQ +R ++P L +Q++ +K+SS Sbjct: 115 YIGEIFRSGIQSVDRGQMEACRALSMSYGQGMRLIVVPQGVRRVLPALVNQFIGNVKDSS 174 Query: 340 LAVAVGF----ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395 L +G ++ VG TG ++L +F YL +++ + +N ++ ++ + Sbjct: 175 LVYFLGLLASEREIFRVGQDQAVVTGNLSPLLLAGVF-YLIVTVPLTHVVNAIDNRLRIG 233 Query: 396 EKK 398 +++ Sbjct: 234 KQR 236 >gi|82776402|ref|YP_402751.1| putative transport system permease protein [Shigella dysenteriae Sd197] gi|309789344|ref|ZP_07683934.1| L-cystine transport system permease protein tcyB [Shigella dysenteriae 1617] gi|81240550|gb|ABB61260.1| putative transport system permease protein [Shigella dysenteriae Sd197] gi|308922738|gb|EFP68255.1| L-cystine transport system permease protein tcyB [Shigella dysenteriae 1617] Length = 222 Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 61/207 (29%), Positives = 108/207 (52%), Gaps = 18/207 (8%) Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251 F +LG +L+L RLS + + L YIS F G P LIA + +++ P Sbjct: 32 FGLLLGFILALM--RLSPIWPVRW---LARFYISIFR--GTP---LIAQLFMIYYGLP-- 79 Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311 QF G + P S I LS TAA+ AE +R+ + ++ +GQ EAA ++G+T + Sbjct: 80 -QF----GIELDP-IPSAMIGLSLNTAAYAAETLRAAISSIDKGQWEAAASIGMTPWQTM 133 Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371 R +LPQA R +P L++ +++L+K++SLA + +L I ++T + + L Sbjct: 134 RRAILPQAARVALPTLSNSFISLVKDTSLAATIQVPELFRQAQLITSRTLEVFTMYLAAS 193 Query: 372 FIYLSLSIMIALFMNRLNAKIALKEKK 398 IY ++ +++ N ++ +E++ Sbjct: 194 LIYWIMATVLSTLQNHFENQLNRQERE 220 Score = 37.0 bits (84), Expect = 5.2, Method: Compositional matrix adjust. Identities = 28/97 (28%), Positives = 45/97 (46%), Gaps = 8/97 (8%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G T L+ GM ++G ++ RLS V W+ R Y+ +FR P + +F + Sbjct: 15 LLKGAGYTLQLSIGGMFFGLLLGFILALMRLSPIWPVRWLARFYISIFRGTPLIAQLFMI 74 Query: 149 YKSV----LSVLPIPDHSIVLPFGMFLNNRGLSFPTL 181 Y + + + PIP I G+ LN + TL Sbjct: 75 YYGLPQFGIELDPIPSAMI----GLSLNTAAYAAETL 107 >gi|30260992|ref|NP_843369.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. Ames] gi|47777862|ref|YP_017493.2| amino acid ABC transporter permease [Bacillus anthracis str. 'Ames Ancestor'] gi|49183837|ref|YP_027089.1| amino acid ABC transporter permease [Bacillus anthracis str. Sterne] gi|167635893|ref|ZP_02394201.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. A0442] gi|167638970|ref|ZP_02397244.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. A0193] gi|170687533|ref|ZP_02878749.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. A0465] gi|170708257|ref|ZP_02898702.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. A0389] gi|177653846|ref|ZP_02935918.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. A0174] gi|229602267|ref|YP_002865432.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. A0248] gi|30254441|gb|AAP24855.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. Ames] gi|47551567|gb|AAT29968.2| amino acid ABC transporter, permease protein [Bacillus anthracis str. 'Ames Ancestor'] gi|49177764|gb|AAT53140.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. Sterne] gi|167513100|gb|EDR88472.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. A0193] gi|167528710|gb|EDR91469.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. A0442] gi|170126778|gb|EDS95660.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. A0389] gi|170668346|gb|EDT19093.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. A0465] gi|172081074|gb|EDT66151.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. A0174] gi|229266675|gb|ACQ48312.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. A0248] Length = 235 Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 48/157 (30%), Positives = 92/157 (58%), Gaps = 14/157 (8%) Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244 T + + +F++G++L+ T L+R + + + +Y+S +I G P LV + + + Sbjct: 36 TTIPLTLITFIIGLILATL-TALARISGSRILQWIARIYVS--IIRGTPLLVQL---FII 89 Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304 + P L V P + + I S A+ +EI+R+ ++++P+GQ EAA +G Sbjct: 90 FYGLPTLN-------VEVEP-YTAAVIGFSLNVGAYASEIIRASILSIPKGQWEAAYTIG 141 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341 +T+ +A + V+LPQA R IPPL++ +++L+K++SLA Sbjct: 142 MTYPQALKRVILPQATRVSIPPLSNTFISLVKDTSLA 178 Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust. Identities = 15/41 (36%), Positives = 26/41 (63%) Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 I+ TL R+S ++++ WI R+YV + R P LV +F ++ Sbjct: 50 ILATLTALARISGSRILQWIARIYVSIIRGTPLLVQLFIIF 90 >gi|258622956|ref|ZP_05717971.1| amino acid ABC transproter, permease protein [Vibrio mimicus VM573] gi|262166783|ref|ZP_06034520.1| amino acid ABC transporter permease protein [Vibrio mimicus VM223] gi|262172776|ref|ZP_06040454.1| amino acid ABC transproter permease protein [Vibrio mimicus MB-451] gi|258584739|gb|EEW09473.1| amino acid ABC transproter, permease protein [Vibrio mimicus VM573] gi|261893852|gb|EEY39838.1| amino acid ABC transproter permease protein [Vibrio mimicus MB-451] gi|262026499|gb|EEY45167.1| amino acid ABC transporter permease protein [Vibrio mimicus VM223] Length = 223 Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 55/171 (32%), Positives = 95/171 (55%), Gaps = 17/171 (9%) Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV-LIAL 240 T++ + VF+ +L +VL+ R F L LYIS F G P LV L L Sbjct: 22 TLEMASWGLVFALILALVLANI-----RVFKVPVLDPLSQLYISFFR--GTPLLVQLFLL 74 Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300 Y L P+L + F + I L+ + AA++AE +R+ +I + R QMEA+ Sbjct: 75 YYGLPQIFPLLVGLD---------AFSAAVIGLTLHFAAYMAESIRAAIIGIDRSQMEAS 125 Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 +++G+T +A R ++LPQA R +P L + +++++K++SLA +G A++++ Sbjct: 126 LSVGMTTSQAMRRIILPQAARVALPSLMNYFIDMIKSTSLAFTLGVAEIMA 176 >gi|229125464|ref|ZP_04254521.1| Amino acid ABC transporter, permease protein [Bacillus cereus 95/8201] gi|228657992|gb|EEL13775.1| Amino acid ABC transporter, permease protein [Bacillus cereus 95/8201] Length = 219 Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 51/179 (28%), Positives = 89/179 (49%), Gaps = 20/179 (11%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 + PLL F+ FGLP L PV+G++ V F++ + Sbjct: 61 RGTPLLLQLLFICFGLPML-------------PVIGEY------LVMDRFVAACLGFILN 101 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 AA+ AEI R GL+A+ +GQ EA+ LGL+ + R V+LPQ R +P + ++ + L+K Sbjct: 102 YAAYFAEIFRGGLLAIDKGQYEASQVLGLSKWQTMRRVILPQMFRIALPAVANESVTLIK 161 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395 +++L AV +L+ T +N+ I + IYL +++++ +F L + + Sbjct: 162 DTALLYAVAVPELLHFAQTAVNRDF-TITPFFVAGLIYLIMTLVLTMFFKWLERRFKFE 219 >gi|168490636|ref|ZP_02714779.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae CDC0288-04] gi|183574959|gb|EDT95487.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae CDC0288-04] Length = 521 Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 38/109 (34%), Positives = 65/109 (59%) Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 +S T A++ EIVR G++AV +GQ EAA ALG+TH + ++LPQ +R+I+P ++++ Sbjct: 384 VSINTGAYMTEIVRGGILAVDKGQFEAATALGMTHNQTMCKIVLPQVVRNILPATGNEFV 443 Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 +K++S+ + +L G T+ QT Q + I IY L+ + Sbjct: 444 INIKDTSVLNVISVVELYFSGNTVATQTYQYFQTFTIIAVIYFVLTFTV 492 >gi|165871931|ref|ZP_02216573.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. A0488] gi|190566522|ref|ZP_03019439.1| amino acid ABC transporter, permease protein [Bacillus anthracis Tsiankovskii-I] gi|196035250|ref|ZP_03102656.1| amino acid ABC transporter, permease protein [Bacillus cereus W] gi|218902066|ref|YP_002449900.1| amino acid ABC transporter, permease protein [Bacillus cereus AH820] gi|227816276|ref|YP_002816285.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. CDC 684] gi|228926026|ref|ZP_04089107.1| Amino acid ABC transporter [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228944595|ref|ZP_04106965.1| Amino acid ABC transporter [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|229089915|ref|ZP_04221170.1| Amino acid ABC transporter [Bacillus cereus Rock3-42] gi|229120487|ref|ZP_04249734.1| Amino acid ABC transporter [Bacillus cereus 95/8201] gi|254682947|ref|ZP_05146808.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. CNEVA-9066] gi|254725735|ref|ZP_05187517.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. A1055] gi|254734361|ref|ZP_05192074.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. Western North America USA6153] gi|254739991|ref|ZP_05197683.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. Kruger B] gi|254753330|ref|ZP_05205366.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. Vollum] gi|254758428|ref|ZP_05210455.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. Australia 94] gi|164712362|gb|EDR17897.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. A0488] gi|190562074|gb|EDV16042.1| amino acid ABC transporter, permease protein [Bacillus anthracis Tsiankovskii-I] gi|195992314|gb|EDX56276.1| amino acid ABC transporter, permease protein [Bacillus cereus W] gi|218537512|gb|ACK89910.1| amino acid ABC transporter, permease protein [Bacillus cereus AH820] gi|227007055|gb|ACP16798.1| amino acid ABC transporter, permease protein [Bacillus anthracis str. CDC 684] gi|228663072|gb|EEL18665.1| Amino acid ABC transporter [Bacillus cereus 95/8201] gi|228693540|gb|EEL47246.1| Amino acid ABC transporter [Bacillus cereus Rock3-42] gi|228815055|gb|EEM61306.1| Amino acid ABC transporter [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228833738|gb|EEM79294.1| Amino acid ABC transporter [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] Length = 209 Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 48/157 (30%), Positives = 92/157 (58%), Gaps = 14/157 (8%) Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244 T + + +F++G++L+ T L+R + + + +Y+S +I G P LV + + + Sbjct: 10 TTIPLTLITFIIGLILATL-TALARISGSRILQWIARIYVS--IIRGTPLLVQL---FII 63 Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304 + P L V P + + I S A+ +EI+R+ ++++P+GQ EAA +G Sbjct: 64 FYGLPTLN-------VEVEP-YTAAVIGFSLNVGAYASEIIRASILSIPKGQWEAAYTIG 115 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341 +T+ +A + V+LPQA R IPPL++ +++L+K++SLA Sbjct: 116 MTYPQALKRVILPQATRVSIPPLSNTFISLVKDTSLA 152 Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust. Identities = 15/41 (36%), Positives = 26/41 (63%) Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 I+ TL R+S ++++ WI R+YV + R P LV +F ++ Sbjct: 24 ILATLTALARISGSRILQWIARIYVSIIRGTPLLVQLFIIF 64 >gi|89072895|ref|ZP_01159452.1| putative amino acid ABC transporter, permease protein [Photobacterium sp. SKA34] gi|89051417|gb|EAR56872.1| putative amino acid ABC transporter, permease protein [Photobacterium sp. SKA34] Length = 311 Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 48/145 (33%), Positives = 83/145 (57%), Gaps = 1/145 (0%) Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306 + VL F F G S + S + + AA+IAE++R+GL ++ +GQ EAA +LGL+ Sbjct: 161 QENVLQSFLF-GSSRLWENLFSGILCVGLIAAAYIAEVIRAGLDSIDKGQWEAADSLGLS 219 Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 R V+ PQA+ I+P L Q+++++K+SS+ + ++ VG + N +G EI Sbjct: 220 KLDRFRFVIFPQAIAGIVPALAGQFISIVKDSSIISLISIQEITFVGSEMANSSGLIFEI 279 Query: 367 ILIWMFIYLSLSIMIALFMNRLNAK 391 L+ +YL L + ++L N+L + Sbjct: 280 WLLVGAVYLILCLSLSLLFNKLEKR 304 >gi|115358613|ref|YP_775751.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria AMMD] gi|115283901|gb|ABI89417.1| amino acid ABC transporter ATP-binding protein, PAAT family / amino acid ABC transporter membrane protein, PAAT family [Burkholderia ambifaria AMMD] Length = 594 Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 45/137 (32%), Positives = 80/137 (58%), Gaps = 4/137 (2%) Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321 +SP F++ + L+ AAF AE++R G++AV +GQ+EAA ALGL + T ++LPQAMR Sbjct: 163 ISP-FLAAVLGLTLNHAAFSAEVIRGGILAVDQGQLEAAAALGLPRGRQTTRIVLPQAMR 221 Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL---IWMFIYLSLS 378 +I+P + ++L K +S+ + +L I + + I +++ +W I L++ Sbjct: 222 AILPTAFNDLISLAKGTSMVYVLAMPELFYTVQVIYRRNLEVIPLLMVATVWYLIILTVL 281 Query: 379 IMIALFMNRLNAKIALK 395 I + + R A+ AL+ Sbjct: 282 SAIQVQVERHYARGALR 298 >gi|297191655|ref|ZP_06909053.1| glutamate transporter permease [Streptomyces pristinaespiralis ATCC 25486] gi|197721589|gb|EDY65497.1| glutamate transporter permease [Streptomyces pristinaespiralis ATCC 25486] Length = 301 Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 43/137 (31%), Positives = 83/137 (60%), Gaps = 4/137 (2%) Query: 260 STVSPEFMSLY---IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316 + +S + LY L Y A+ +AE+VR+G++++P+GQ EAA A+GL + VLL Sbjct: 130 TNISSDLRPLYAVVTGLVLYNASVLAEVVRAGILSLPKGQSEAAKAIGLRKGQTMTSVLL 189 Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAV-GFADLVSVGGTIINQTGQAIEIILIWMFIYL 375 PQ++ +++P L SQ + ++K+++L AV FA+L++ GT+ I ++ I++ Sbjct: 190 PQSVTAMLPALVSQLVVIVKDTALGGAVLAFAELLNARGTLAAYYANVIPSFIVVAVIFI 249 Query: 376 SLSIMIALFMNRLNAKI 392 L++++ F + L ++ Sbjct: 250 VLNLILTTFASWLEGRL 266 Score = 41.6 bits (96), Expect = 0.20, Method: Compositional matrix adjust. Identities = 25/70 (35%), Positives = 37/70 (52%) Query: 78 PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137 P+T ++ T +L G NT A M+ A +G L G RLS ++ V + VE FR Sbjct: 52 PFTEAEAWTTYLLPGLANTLKAAALAMVIALPLGALFGIARLSDHRWVRVPASIIVEFFR 111 Query: 138 NIPPLVVIFF 147 IP L+++ F Sbjct: 112 AIPVLLLMLF 121 >gi|194468075|ref|ZP_03074061.1| polar amino acid ABC transporter, inner membrane subunit [Lactobacillus reuteri 100-23] gi|194452928|gb|EDX41826.1| polar amino acid ABC transporter, inner membrane subunit [Lactobacillus reuteri 100-23] Length = 233 Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 51/201 (25%), Positives = 104/201 (51%), Gaps = 6/201 (2%) Query: 191 VFSFVLGIVLSLFAT--RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248 + SF G++++L RLSR + G + L +I++F ++ + L+ + + F Sbjct: 25 IISFFFGLIIALVTALIRLSR----QRGAFMILKWIASFYVWLFRSTPLLVQLFIVFFGL 80 Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308 P L + F + I S T A+ +E +R+ + +VP GQ EA A+G+T Sbjct: 81 PYLRIKGVLPHGIKLEPFTAGIITFSLNTGAYASETIRAAIGSVPTGQWEAGAAIGMTRL 140 Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368 + ++LPQA+R +PPL++ +++L+K++SLA ++ ++ +V I + Q + + Sbjct: 141 QILWRIILPQALRVALPPLSNSFISLVKDTSLAASITIMEMFAVSQQIAAENYQPLLMYT 200 Query: 369 IWMFIYLSLSIMIALFMNRLN 389 + +Y + +++ F L Sbjct: 201 LVAMVYAVFTTILSYFQGYLE 221 >gi|170760706|ref|YP_001785786.1| His/Glu/Gln/Arg/opine ABC transporter permease [Clostridium botulinum A3 str. Loch Maree] gi|169407695|gb|ACA56106.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Clostridium botulinum A3 str. Loch Maree] Length = 211 Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 28/82 (34%), Positives = 57/82 (69%) Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 A++AE R+G+ ++ +GQ+EAA LG T+ + +++PQA+R++IPP+ ++ +NL+K+ Sbjct: 96 GAYLAETFRAGIESIDKGQVEAAKVLGFTYNQTMFKIIVPQAIRNVIPPICNESINLIKD 155 Query: 338 SSLAVAVGFADLVSVGGTIINQ 359 S+L A+G D++ ++ + Sbjct: 156 SALVAAIGIGDMLRAAKEVVTR 177 >gi|238853596|ref|ZP_04643965.1| ABC-type amino acid transport system, permease component [Lactobacillus gasseri 202-4] gi|238833740|gb|EEQ26008.1| ABC-type amino acid transport system, permease component [Lactobacillus gasseri 202-4] Length = 214 Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 60/205 (29%), Positives = 105/205 (51%), Gaps = 17/205 (8%) Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV-LIALKYQLHF 246 +IF ++ V+ I L L H + K KA+ Y+ ++I G P L+ LI + Y L Sbjct: 21 EIFFWTTVVSIPLGLLVA-FGLHSNLKLVKAILKFYV--WIIRGTPLLLQLIFIFYGL-- 75 Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306 P +G V P + + +A AA+ AEI R GL AVP GQ EAA LGL+ Sbjct: 76 --PTVG--------IVFPRYEAALVAFIINYAAYFAEIFRGGLQAVPVGQFEAAQVLGLS 125 Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 + ++ PQ ++ ++P + ++ +NL+K+SSL +G DL+ G + + + Sbjct: 126 RLQTINRIVRPQVVKIVLPSIGNELINLVKDSSLVYVIGLGDLLRAGNVATARDVSLVPL 185 Query: 367 ILIWMFIYLSLSIMIALFMNRLNAK 391 +L+ +YL+++ ++ + + K Sbjct: 186 VLVGC-VYLAMTAVLTALLRVVEKK 209 >gi|220923581|ref|YP_002498883.1| polar amino acid ABC transporter inner membrane subunit [Methylobacterium nodulans ORS 2060] gi|219948188|gb|ACL58580.1| polar amino acid ABC transporter, inner membrane subunit [Methylobacterium nodulans ORS 2060] Length = 216 Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 41/127 (32%), Positives = 67/127 (52%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + LS + +AF+ EI R + VPRGQ EAA ALGL + LV++PQA+R +PP Sbjct: 90 LGLSLHASAFLGEIWRGSIETVPRGQWEAATALGLRYWPRMALVIVPQAVRIAVPPTIGF 149 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 + L+K +SLA +GF +L I N T + + + +Y + ++ + R+ Sbjct: 150 LVQLIKGTSLASIIGFVELTRAAQIINNATFRPFTLFGLVALVYFVICWPLSAYSRRIEK 209 Query: 391 KIALKEK 397 A+ + Sbjct: 210 TFAVASR 216 >gi|91763311|ref|ZP_01265275.1| amino-acid ABC transporter permease protein yhdY-like protein [Candidatus Pelagibacter ubique HTCC1002] gi|91717724|gb|EAS84375.1| amino-acid ABC transporter permease protein yhdY-like protein [Candidatus Pelagibacter ubique HTCC1002] Length = 426 Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 34/97 (35%), Positives = 63/97 (64%) Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315 F+ T + + + +A++ + AA+ AE++R GL A+PRGQ +AA +LG+ + K V+ Sbjct: 283 FLPDGTYVDKLIRVVVAITLFEAAYTAEVIRGGLQALPRGQYDAAKSLGMGYWKLHIFVI 342 Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352 LPQA++ +IP + + +L L+K++ L VG ++V + Sbjct: 343 LPQALKLVIPGIANTFLALVKDTPLIFVVGLLEVVGM 379 >gi|327462744|gb|EGF09066.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK1057] Length = 228 Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 55/166 (33%), Positives = 87/166 (52%), Gaps = 6/166 (3%) Query: 233 PTLVLIALKYQLHFDKPVLGQ-FNFIGGSTVSPEFMSLYIALSCY---TAAFIAEIVRSG 288 P ++LI Y L +L Q F +G +F LY A Y T ++EI+RS Sbjct: 64 PPILLILFFYSLF--PSLLNQIFKSLGSQVDVFKFNPLYYAFIIYSLMTTGSLSEILRSA 121 Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348 ++ V +GQ+EAA A+GLT+ +A R V+ PQA+RS +P L + +NL+K +SL + D Sbjct: 122 ILTVDKGQLEAAQAIGLTNFQAYRRVVFPQALRSALPNLANLVINLVKGTSLVFVMTVKD 181 Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394 + ++ + + Q E L+ IYL + +I L + AL Sbjct: 182 ITALAKIEASHSYQYSESYLVIFVIYLIICGLIQWIFRGLEKRYAL 227 >gi|315653364|ref|ZP_07906286.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus iners ATCC 55195] gi|315489289|gb|EFU78929.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus iners ATCC 55195] Length = 219 Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 55/175 (31%), Positives = 89/175 (50%), Gaps = 30/175 (17%) Query: 191 VFSFVLGIVLSL---FATRLSRH---FHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244 + SF+LG+ L + ++ H F + LPLL I F FGLP Sbjct: 32 ILSFILGLFLGIVRYLKIKVISHIVGFIVDILRNLPLLLIIFFAYFGLP----------- 80 Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304 Q + T + IAL + A +AEIVRSG+ AV +GQ+E A++ G Sbjct: 81 --------QLGIVTNVTCAA-----IIALVVFEGAMLAEIVRSGIGAVNKGQLEGALSNG 127 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359 +T+ +A V++PQA+ +IP + SQ+++L+K++SLA + +L+ I +Q Sbjct: 128 MTYAQAMYHVVVPQALHFMIPAILSQFVSLIKDTSLATIIVLPELLYHAQIIYSQ 182 >gi|304405413|ref|ZP_07387072.1| polar amino acid ABC transporter, inner membrane subunit [Paenibacillus curdlanolyticus YK9] gi|304345452|gb|EFM11287.1| polar amino acid ABC transporter, inner membrane subunit [Paenibacillus curdlanolyticus YK9] Length = 236 Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 51/187 (27%), Positives = 94/187 (50%), Gaps = 11/187 (5%) Query: 211 FHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY 270 F+ K + P+L + FGLP L+ + F + S P + + Sbjct: 57 FYVKFIRGTPMLMHLFLIYFGLPKLI-----------DWLSASFGWSFTSVQIPILVFVL 105 Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IA S A+++EIVRSG++AV RGQ+EAA+++G+T +A R ++ PQA+ +P L++ Sbjct: 106 IAFSITAGAYMSEIVRSGMLAVDRGQLEAALSVGMTRTQAIRRIVFPQALAVSLPNLSNA 165 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 + +L S++A V ++ + + E + IY +L+++I + L Sbjct: 166 LIGMLHGSTVAFTVPVIEVFGQANIVAMTNWKYFEAFIAAAIIYWALTLLIEKSTSVLEK 225 Query: 391 KIALKEK 397 +I+L + Sbjct: 226 RISLYNR 232 >gi|300718475|ref|YP_003743278.1| Glutamine ABC transporter, permease subunit [Erwinia billingiae Eb661] gi|299064311|emb|CAX61431.1| Glutamine ABC transporter, permease subunit [Erwinia billingiae Eb661] Length = 270 Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 41/131 (31%), Positives = 79/131 (60%), Gaps = 5/131 (3%) Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 ALS +A++ EI R+G+ +V RGQ+EA ALG+++ +A L+++PQ +R ++P + +Q+ Sbjct: 107 ALSLIASAYMGEIFRAGIQSVERGQLEACRALGMSYARAMSLIIIPQGIRRVLPAVVNQF 166 Query: 332 LNLLKNSSLAVAVGF----ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387 + ++K+SSL +G +L VG TG ++L +F YL +++ + +N Sbjct: 167 IAIIKDSSLVYLLGLMVNERELFRVGQDAAVLTGNLSPLMLAGLF-YLMITVPMTHLVNY 225 Query: 388 LNAKIALKEKK 398 ++A+ +K Sbjct: 226 VDARYRTGRRK 236 >gi|182441007|dbj|BAG24132.1| probable amino acid permease [Pseudomonas cichorii] Length = 246 Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 42/112 (37%), Positives = 68/112 (60%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 EF++ + L+ Y++AFIAE R+G+ +V Q A A GL + R V+LPQA+R+ + Sbjct: 112 EFIAGFWGLTLYSSAFIAEEFRAGVASVRPQQRIAGQAQGLRPVQVWRYVVLPQAVRTAL 171 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376 PL Q +N+LKNSSL +A+G A+L + +T +A + I +Y++ Sbjct: 172 GPLLGQCMNVLKNSSLTMAIGLAELSYASRQVETETFKAFQAFGIATLLYIA 223 Score = 45.8 bits (107), Expect = 0.013, Method: Compositional matrix adjust. Identities = 25/66 (37%), Positives = 40/66 (60%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151 GF+ T L+ + AT +G L+ R+S+++ +W R Y+ +FRN P LV +FF Y Sbjct: 21 GFLLTLRLSILVCLIATALGFLICLARISSSRFWSWPARGYLSLFRNTPLLVQLFFWYFG 80 Query: 152 VLSVLP 157 V ++LP Sbjct: 81 VSALLP 86 >gi|170738225|ref|YP_001779485.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia cenocepacia MC0-3] gi|169820413|gb|ACA94995.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia cenocepacia MC0-3] Length = 597 Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 45/137 (32%), Positives = 80/137 (58%), Gaps = 4/137 (2%) Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321 +SP F++ + L+ AAF AE++R G++AV +GQ+EAA ALGL + T ++LPQAMR Sbjct: 163 ISP-FLAAVLGLTLNHAAFSAEVIRGGILAVDQGQLEAAAALGLPRGRQTSRIVLPQAMR 221 Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL---IWMFIYLSLS 378 +I+P + ++L K +S+ + +L I + + I +++ +W I L++ Sbjct: 222 AILPTAFNDLISLAKGTSMVYVLAMPELFYTVQVIYRRNLEVIPLLMVATVWYLIILTVL 281 Query: 379 IMIALFMNRLNAKIALK 395 I + + R A+ AL+ Sbjct: 282 SAIQVQVERHYARGALR 298 >gi|304414485|ref|ZP_07395705.1| putative amino acid transport system permease [Candidatus Regiella insecticola LSR1] gi|304283203|gb|EFL91605.1| putative amino acid transport system permease [Candidatus Regiella insecticola LSR1] Length = 241 Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 54/223 (24%), Positives = 109/223 (48%), Gaps = 11/223 (4%) Query: 177 SFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV 236 FP L + A + S + G+ ++ T L TG +L +P ++ Sbjct: 17 GFPELPLGGAALTLLISLMAGLASAILGTLLGVLLAMTTGFWGQILAAVLGFFRAIPVIM 76 Query: 237 LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296 LI + +F P++ + PE ++ AL T++++A V++G++AV GQ Sbjct: 77 LI---FWTYFLLPIIFGVDI-------PEITTVVCALMLITSSYLAHAVKAGILAVGAGQ 126 Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356 +A ++LG + ++LPQA+R ++P +Q++ L+K++SLA VG +L + + Sbjct: 127 WQAGLSLGFNRWQVLLFIILPQALRMMVPSFVNQWIALIKDTSLAYIVGVNELTFLATQV 186 Query: 357 INQTG-QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 N++ +EI L IY L +++ +N + + + ++ Sbjct: 187 NNRSMVYPMEIFLFVGCIYFVLCLLLDFLVNAITNEFRVTARR 229 >gi|294788441|ref|ZP_06753684.1| L-cystine ABC transporter, permease protein [Simonsiella muelleri ATCC 29453] gi|294483872|gb|EFG31556.1| L-cystine ABC transporter, permease protein [Simonsiella muelleri ATCC 29453] Length = 238 Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 36/121 (29%), Positives = 67/121 (55%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I S T A+ +E +RS +++VP+GQ EA ++G+T+ + R ++ PQA R +PPL++ Sbjct: 111 IGFSLNTGAYASETIRSAILSVPKGQWEAGFSIGMTYMQTFRRIIAPQAFRVAVPPLSND 170 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++ L KN+SLA V +L V N + + + + +Y +++ L R+ Sbjct: 171 FIGLFKNTSLASVVTVTELFRVAQQYANLSYDFLPVYIEAGVVYWCFCMVLFLIQARIEK 230 Query: 391 K 391 + Sbjct: 231 R 231 >gi|182439549|ref|YP_001827268.1| putative ABC transporter permease protein [Streptomyces griseus subsp. griseus NBRC 13350] gi|178468065|dbj|BAG22585.1| putative ABC transporter permease protein [Streptomyces griseus subsp. griseus NBRC 13350] Length = 305 Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 39/128 (30%), Positives = 76/128 (59%), Gaps = 3/128 (2%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + L+ + AA+ AEIVR G++AV GQ+EAA ALG+ + R ++LPQAMRSI+P ++ Sbjct: 178 LGLALHQAAYAAEIVRGGVLAVGGGQLEAASALGIPRLRQLRRIVLPQAMRSILPNAANE 237 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI---WMFIYLSLSIMIALFMNR 387 ++L K +S+ + +L + ++G+ + ++++ W + + ++ ++ R Sbjct: 238 IISLFKGTSIVSVMAIGELFYQVQVVYGRSGRVVPLLMVATAWYILLTTALSIVQYYVER 297 Query: 388 LNAKIALK 395 AK A++ Sbjct: 298 HYAKGAVR 305 >gi|171320895|ref|ZP_02909892.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria MEX-5] gi|171093838|gb|EDT38972.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria MEX-5] Length = 231 Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 63/219 (28%), Positives = 103/219 (47%), Gaps = 27/219 (12%) Query: 191 VFSFVLGIVLSL-------FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY- 242 VF F L I ++ F R+S+ F E +I G P LV I L Y Sbjct: 29 VFGFGLAIAIAFARLSPNPFIARMSKGFTE--------------VIRGTPLLVQIYLIYY 74 Query: 243 ---QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299 L P L F + F + AL A++ E++R+GL VP+G++EA Sbjct: 75 GVGSLFVGWPALRDSVFW--PFLRDGFWYVAFALVISVGAYVGEVLRAGLRGVPKGEIEA 132 Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359 A A+G+ R V LP+A++ ++P L + + LLK+++LA V D++ I Q Sbjct: 133 ARAMGMRPSMIARRVSLPRAIQILLPTLAGETVMLLKSTALASTVAVMDVLGAANYIRAQ 192 Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 T + E +L IY++L+ +I RL ++ ++ + Sbjct: 193 TLRTYEPLLAIAVIYVALAFVIEHAFGRLERRVPVRMPR 231 >gi|83854939|ref|ZP_00948469.1| ABC glutamate/glutamine/aspartate/asparagine transporter, inner membrane subunit BztC [Sulfitobacter sp. NAS-14.1] gi|83842782|gb|EAP81949.1| ABC glutamate/glutamine/aspartate/asparagine transporter, inner membrane subunit BztC [Sulfitobacter sp. NAS-14.1] Length = 431 Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 37/91 (40%), Positives = 61/91 (67%), Gaps = 1/91 (1%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I ++ + +A+IAE++R GL A+PRGQ EAA +LGL + +A RL++LPQA++ IP + + Sbjct: 301 IMITMFASAYIAEVIRGGLAALPRGQYEAADSLGLDYAQAMRLIILPQALKISIPGIVNV 360 Query: 331 YLNLLKNSSLAVAVGFADLVS-VGGTIINQT 360 + L K+++L + DLV + G I+ T Sbjct: 361 AVGLFKDTTLVSIISMFDLVGMIRGPILAST 391 >gi|225029008|ref|ZP_03718200.1| hypothetical protein EUBHAL_03300 [Eubacterium hallii DSM 3353] gi|224953670|gb|EEG34879.1| hypothetical protein EUBHAL_03300 [Eubacterium hallii DSM 3353] Length = 243 Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 42/137 (30%), Positives = 76/137 (55%) Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315 FI ++ + + M I + A++AEI RSG+++V +GQMEA +LGL + ++ Sbjct: 101 FIVLASSNNKVMVAVITFGVNSGAYVAEIFRSGIMSVDKGQMEAGRSLGLGYTDTMLQII 160 Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375 +PQA+++ +P L ++ + LLK +S+ +G +L G I T A+ +LI IYL Sbjct: 161 MPQAIKNCLPALVNEMITLLKETSICGYIGLNELTRGGDIIRGITYDAMMPLLIVAVIYL 220 Query: 376 SLSIMIALFMNRLNAKI 392 + + M +L ++ Sbjct: 221 VIVMFFTWLMGKLERRL 237 >gi|194397297|ref|YP_002037131.1| amino acid ABC transporter amino acid-binding protein/permease [Streptococcus pneumoniae G54] gi|194356964|gb|ACF55412.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae G54] Length = 521 Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 38/109 (34%), Positives = 65/109 (59%) Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 +S T A++ EIVR G++AV +GQ EAA ALG+TH + ++LPQ +R+I+P ++++ Sbjct: 384 VSINTGAYMTEIVRGGILAVDKGQFEAATALGMTHNQTMCKIVLPQVVRNILPATGNEFV 443 Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 +K++S+ + +L G T+ QT Q + I IY L+ + Sbjct: 444 INIKDTSVLNVISVVELYFSGNTVATQTYQYFQTFTIIAVIYFVLTFTV 492 >gi|78062381|ref|YP_372289.1| amino acid ABC transporter inner membrane protein [Burkholderia sp. 383] gi|77970266|gb|ABB11645.1| amino acid ABC transporter membrane protein, PAAT family / amino acid ABC transporter ATP-binding protein, PAAT family [Burkholderia sp. 383] Length = 619 Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 45/137 (32%), Positives = 80/137 (58%), Gaps = 4/137 (2%) Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321 +SP F++ + L+ + AAF AE++R G++AV +GQ+EAA ALGL + T ++LPQAMR Sbjct: 186 ISP-FLAAVLGLTLHHAAFSAEVIRGGILAVDQGQLEAAAALGLPRGRQTTRIVLPQAMR 244 Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL---IWMFIYLSLS 378 +I+P + + L K +S+ + +L I + + I +++ +W I L++ Sbjct: 245 AILPTAFNDLIMLAKGTSMVYVLAMPELFYTVQVIYRRNLEVIPLLMVATVWYLIILTVL 304 Query: 379 IMIALFMNRLNAKIALK 395 I + + R A+ AL+ Sbjct: 305 SAIQVQVERHYARGALR 321 >gi|71083648|ref|YP_266368.1| putative amino-acid ABC transporter permease protein yhdY [Candidatus Pelagibacter ubique HTCC1062] gi|71062761|gb|AAZ21764.1| Similar to amino-acid ABC transporter permease protein yhdY [Candidatus Pelagibacter ubique HTCC1062] Length = 426 Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 34/97 (35%), Positives = 63/97 (64%) Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315 F+ T + + + +A++ + AA+ AE++R GL A+PRGQ +AA +LG+ + K V+ Sbjct: 283 FLPDGTYVDKLIRVVVAITLFEAAYTAEVIRGGLQALPRGQYDAAKSLGMGYWKLHIFVI 342 Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352 LPQA++ +IP + + +L L+K++ L VG ++V + Sbjct: 343 LPQALKLVIPGIANTFLALVKDTPLIFVVGLLEVVGM 379 >gi|254248371|ref|ZP_04941691.1| ABC-type amino acid transport system, permease component [Burkholderia cenocepacia PC184] gi|124874872|gb|EAY64862.1| ABC-type amino acid transport system, permease component [Burkholderia cenocepacia PC184] Length = 597 Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 45/137 (32%), Positives = 80/137 (58%), Gaps = 4/137 (2%) Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321 +SP F++ + L+ AAF AE++R G++AV +GQ+EAA ALGL + T ++LPQAMR Sbjct: 163 ISP-FLAAVLGLTLNHAAFSAEVIRGGILAVDQGQLEAAAALGLPRGRQTSRIVLPQAMR 221 Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL---IWMFIYLSLS 378 +I+P + ++L K +S+ + +L I + + I +++ +W I L++ Sbjct: 222 AILPTAFNDLISLAKGTSMVYVLAMPELFYTVQVIYRRNLEVIPLLMVATVWYLIILTVL 281 Query: 379 IMIALFMNRLNAKIALK 395 I + + R A+ AL+ Sbjct: 282 SAIQVQVERHYARGALR 298 >gi|283833319|ref|ZP_06353060.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Citrobacter youngae ATCC 29220] gi|291070957|gb|EFE09066.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Citrobacter youngae ATCC 29220] Length = 225 Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 48/135 (35%), Positives = 78/135 (57%), Gaps = 10/135 (7%) Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281 L+I I G+P LI + + + + P+L + G TV+ +AL+ +TAA + Sbjct: 64 LFIWAGFIRGIP---LIFVIFWMWYLLPMLTGSDLPGAVTVT-------LALAWFTAASV 113 Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341 V +G+ A+P GQ EAA+ G +A RL+LLPQ +R+++P LT ++ LLK++SLA Sbjct: 114 MHSVYAGISALPGGQYEAAVVQGFHPFQALRLILLPQVLRNVMPSLTGIFIGLLKDTSLA 173 Query: 342 VAVGFADLVSVGGTI 356 V +L +V G + Sbjct: 174 FIVNVPELTTVAGQV 188 >gi|196248813|ref|ZP_03147513.1| polar amino acid ABC transporter, inner membrane subunit [Geobacillus sp. G11MC16] gi|196211689|gb|EDY06448.1| polar amino acid ABC transporter, inner membrane subunit [Geobacillus sp. G11MC16] Length = 206 Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 37/89 (41%), Positives = 57/89 (64%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 F + IA+S A+++E VRS ++AV RGQ EAAIAL +T + RLV+LPQA+R ++ Sbjct: 72 SFWAGVIAVSLNYGAYVSETVRSCILAVDRGQHEAAIALNMTRFQRMRLVILPQAVRMML 131 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVG 353 P + + +LK++SL +G D+ G Sbjct: 132 PDFGNNLIQMLKSTSLVSLIGLTDITYAG 160 >gi|86360891|ref|YP_472778.1| amino acid ABC transporter permease [Rhizobium etli CFN 42] gi|86284993|gb|ABC94051.1| probable amino acid ABC transporter, permease protein [Rhizobium etli CFN 42] Length = 219 Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 39/115 (33%), Positives = 65/115 (56%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P +++ +AL ++AAF+ EI R + AV +GQ EA+ +LG+ + R V+LPQA+R Sbjct: 84 PAWLAAGLALILWSAAFLTEIWRGCVEAVAKGQWEASASLGMGRLQQMRYVILPQALRIA 143 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378 IPP + ++K ++L +GF +L G + N T Q + + IY +L Sbjct: 144 IPPTVGFSVQIIKGTALTSIIGFVELSKAGTVVTNATFQPFTVYGLVALIYFALC 198 >gi|295689851|ref|YP_003593544.1| polar amino acid ABC transporter inner membrane subunit [Caulobacter segnis ATCC 21756] gi|295431754|gb|ADG10926.1| polar amino acid ABC transporter, inner membrane subunit [Caulobacter segnis ATCC 21756] Length = 342 Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 38/82 (46%), Positives = 57/82 (69%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +A++ + AA++AE VR GL+AVP+GQ EAA ALGL +A V+LPQA+R+ P L + Sbjct: 210 VAITLFEAAYMAEAVRGGLMAVPQGQREAARALGLGPLRALVDVVLPQALRTATPALVNS 269 Query: 331 YLNLLKNSSLAVAVGFADLVSV 352 ++ LLK++SL +G D+ V Sbjct: 270 FIGLLKDTSLLYVIGVLDITGV 291 >gi|258543772|ref|ZP_05704006.1| L-cystine ABC superfamily ATP binding cassette transporter, permease protein [Cardiobacterium hominis ATCC 15826] gi|258521008|gb|EEV89867.1| L-cystine ABC superfamily ATP binding cassette transporter, permease protein [Cardiobacterium hominis ATCC 15826] Length = 267 Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 42/127 (33%), Positives = 68/127 (53%), Gaps = 4/127 (3%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I S A+ +E VR+ +++VPRGQ EA +G+T+ + R ++LPQA+R +PPL++ Sbjct: 140 IGFSLNVGAYASETVRAAILSVPRGQWEAGFTIGMTYLQTFRRIILPQALRVSVPPLSNS 199 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ----AIEIILIWMFIYLSLSIMIALFMN 386 ++ L K +SLA V +L I N + IE L++ LS+ + Sbjct: 200 FIGLFKETSLASTVTITELFRAAQQIANASYDFLPVYIEAALVYWIFCFGLSLAQSRLER 259 Query: 387 RLNAKIA 393 RL+ IA Sbjct: 260 RLDRYIA 266 >gi|257888300|ref|ZP_05667953.1| amino acid ABC transporter [Enterococcus faecium 1,141,733] gi|257896810|ref|ZP_05676463.1| amino acid ABC transporter [Enterococcus faecium Com12] gi|257899737|ref|ZP_05679390.1| amino acid ABC transporter [Enterococcus faecium Com15] gi|293572975|ref|ZP_06683918.1| amino acid ABC transporter, permease protein [Enterococcus faecium E980] gi|257824354|gb|EEV51286.1| amino acid ABC transporter [Enterococcus faecium 1,141,733] gi|257833375|gb|EEV59796.1| amino acid ABC transporter [Enterococcus faecium Com12] gi|257837649|gb|EEV62723.1| amino acid ABC transporter [Enterococcus faecium Com15] gi|291606953|gb|EFF36332.1| amino acid ABC transporter, permease protein [Enterococcus faecium E980] Length = 213 Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 59/221 (26%), Positives = 111/221 (50%), Gaps = 41/221 (18%) Query: 185 TNAKIFVFSFV----LGIVLSLFATRLSRHF---------HEKTGKALPLLYISTFLIFG 231 T K+F+F+ + LGI+L+L LS HF + + PLL F+ +G Sbjct: 17 TTLKLFLFTLIGSLPLGIILAL---GLSLHFKPLRYFLQTYVWIMRGTPLLLQLIFVFYG 73 Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291 LPT+ ++ FD+ F + IA AA+ AEI R G+ + Sbjct: 74 LPTIGIV-------FDR-----------------FEAALIAFILNYAAYFAEIFRGGIQS 109 Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 +P+GQ EAA L L+ + +++PQ + ++P + ++ +NL+K+SSL +G D++ Sbjct: 110 IPQGQYEAAQVLQLSPFQTVTKIVIPQVTKIVLPSVGNEVINLVKDSSLIYILGLGDVMR 169 Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 G + + + ++ + + IYL+L+ ++ + M ++ K+ Sbjct: 170 AGKIAMERDATLLPLLGVAI-IYLTLTGILTIVMKQVEGKL 209 >gi|237650335|ref|ZP_04524587.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae CCRI 1974] gi|237822023|ref|ZP_04597868.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae CCRI 1974M2] Length = 521 Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 38/109 (34%), Positives = 65/109 (59%) Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 +S T A++ EIVR G++AV +GQ EAA ALG+TH + ++LPQ +R+I+P ++++ Sbjct: 384 VSINTGAYMTEIVRGGILAVDKGQFEAATALGMTHNQTMCKIVLPQVVRNILPATGNEFV 443 Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 +K++S+ + +L G T+ QT Q + I IY L+ + Sbjct: 444 INIKDTSVLNVISVVELYFSGNTVATQTYQYFQTFTIIAVIYFVLTFTV 492 >gi|91784416|ref|YP_559622.1| polar amino acid ABC transporter inner membrane protein [Burkholderia xenovorans LB400] gi|91688370|gb|ABE31570.1| amino acid ABC transporter membrane protein, PAAT family [Burkholderia xenovorans LB400] Length = 313 Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 40/120 (33%), Positives = 67/120 (55%), Gaps = 3/120 (2%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I L+ Y + AEI R G+ AV RGQ EA A+G++ + V++PQA+R IIPPL ++ Sbjct: 186 IGLAMYLGGYSAEIFRGGVSAVDRGQREACKAIGMSDFRTMWHVVMPQAVRIIIPPLANE 245 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII---LIWMFIYLSLSIMIALFMNR 387 + + KN+SL +G+ +L++ I + I ++ IW + SL++ + R Sbjct: 246 LITMFKNTSLVTVIGYVELLTTVQLIYATNFETIPLLTVACIWYLVLTSLAMAAQSLLER 305 >gi|327193781|gb|EGE60658.1| amino acid ABC transporter permease [Rhizobium etli CNPAF512] Length = 308 Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 41/119 (34%), Positives = 68/119 (57%) Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 AA+ AE++R L+AVP+G++EA A GL+ K TR + LP+A+R +P + + + LK Sbjct: 190 AAYEAEVLRGALLAVPKGELEAGRAFGLSPWKLTRRIWLPRAIRIALPTIAGEIVMQLKA 249 Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 + LA V DL +V + T E +L+ YL+L+ +IA L A++ ++ Sbjct: 250 TPLAFTVTVMDLYAVANKVRQDTLLVYEPLLVVTLFYLALTAVIARVFRGLEAQVPVRR 308 >gi|325063883|gb|ADY67573.1| amino acid ABC transporter, membrane spanning protein [Agrobacterium sp. H13-3] Length = 216 Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 39/95 (41%), Positives = 59/95 (62%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 ++++ IA + + +AF+ EI R G+ AVP+GQ EAA ALGL + + V+LPQA + +P Sbjct: 85 WIAVAIAFTLHASAFLGEIWRGGIQAVPKGQTEAANALGLHYLSRMKDVVLPQAFKISLP 144 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 + L+K +SLA VGF +L G + NQT Sbjct: 145 ATIGFLVQLIKGTSLAAIVGFVELSRAGQIVSNQT 179 >gi|300811765|ref|ZP_07092238.1| putative arginine ABC transporter, permease protein ArtQ [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|313124503|ref|YP_004034762.1| glutamine ABC transporter permease component [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|300497264|gb|EFK32313.1| putative arginine ABC transporter, permease protein ArtQ [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|312281066|gb|ADQ61785.1| Glutamine ABC transporter permease component [Lactobacillus delbrueckii subsp. bulgaricus ND02] Length = 213 Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 50/146 (34%), Positives = 78/146 (53%), Gaps = 20/146 (13%) Query: 228 LIFGLPTLVLIA---------LKYQLHF------DKPVLGQ--FNFIGGSTVS---PEFM 267 LIF LP +L++ LK+ L+F P+L Q F F G V P +M Sbjct: 26 LIFSLPLGILVSFGLSSRFAPLKWLLNFYVWLMRGTPLLLQLIFVFYGLPIVGLTFPRYM 85 Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327 + +A A+ AEI R G A+ RGQ EAA L LT+ + R +++PQ ++ ++P + Sbjct: 86 AALVAFVLNYTAYFAEIFRGGNQAIDRGQFEAAKVLQLTYGQTLRKIVIPQVIKIVLPSI 145 Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVG 353 ++ +NL+K+SSL +G DL+ G Sbjct: 146 GNEVINLVKDSSLVYVIGLGDLLRAG 171 >gi|289627187|ref|ZP_06460141.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289648679|ref|ZP_06480022.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. aesculi str. 2250] gi|330868024|gb|EGH02733.1| amino acid ABC transporter permease [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 220 Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 46/164 (28%), Positives = 88/164 (53%), Gaps = 11/164 (6%) Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292 P LVLI L Y F P LG + S + LS Y A++ E+ R+GL+++ Sbjct: 68 PILVLILLIY---FALPGLG--------IRLDKLASFIVTLSLYAGAYLTEVFRAGLLSI 116 Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352 +GQ EA +A+GL + +++ +R+++P L++ +++L K++SLA A+ +L Sbjct: 117 HKGQREAGLAIGLGEWQVRAYIIVQVMLRNVLPALSNNFISLFKDTSLAAAIAVPELTYY 176 Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 I ++ + IE L+ +Y+ +IA+ + L ++A++ Sbjct: 177 ARKINVESYRVIETWLVTTALYVVACYVIAMLLRTLEQRLAIRR 220 >gi|107026286|ref|YP_623797.1| amino acid ABC transporter permease [Burkholderia cenocepacia AU 1054] gi|116692525|ref|YP_838058.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia cenocepacia HI2424] gi|105895660|gb|ABF78824.1| amino acid ABC transporter ATP-binding protein, PAAT family / amino acid ABC transporter membrane protein, PAAT family [Burkholderia cenocepacia AU 1054] gi|116650525|gb|ABK11165.1| amino acid ABC transporter membrane protein, PAAT family / amino acid ABC transporter ATP-binding protein, PAAT family [Burkholderia cenocepacia HI2424] Length = 597 Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 45/137 (32%), Positives = 80/137 (58%), Gaps = 4/137 (2%) Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321 +SP F++ + L+ AAF AE++R G++AV +GQ+EAA ALGL + T ++LPQAMR Sbjct: 163 ISP-FLAAVLGLTLNHAAFSAEVIRGGILAVDQGQLEAAAALGLPRGRQTSRIVLPQAMR 221 Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL---IWMFIYLSLS 378 +I+P + ++L K +S+ + +L I + + I +++ +W I L++ Sbjct: 222 AILPTAFNDLISLAKGTSMVYVLAMPELFYTVQVIYRRNLEVIPLLMVATVWYLIILTVL 281 Query: 379 IMIALFMNRLNAKIALK 395 I + + R A+ AL+ Sbjct: 282 SAIQVQVERHYARGALR 298 >gi|27381509|ref|NP_773038.1| ABC transporter permease [Bradyrhizobium japonicum USDA 110] gi|27354677|dbj|BAC51663.1| blr6399 [Bradyrhizobium japonicum USDA 110] Length = 222 Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 40/110 (36%), Positives = 65/110 (59%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IALS AF AEI+R G+ +PRGQ EA ALGL + R ++ A+R+I P L SQ Sbjct: 95 IALSLNAGAFAAEIIRGGIDGIPRGQFEAGAALGLHPFQVLRFIVFKPALRAIYPALASQ 154 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380 ++ LL SS+ A+ +L + ++ T ++ EI ++ +YL ++++ Sbjct: 155 FVLLLLTSSIVSAISAEELTAAAQSVDTLTFRSFEIYIVATLLYLLMALV 204 >gi|251787824|ref|YP_003002545.1| polar amino acid ABC transporter inner membrane subunit [Dickeya zeae Ech1591] gi|247536445|gb|ACT05066.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya zeae Ech1591] Length = 227 Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 61/209 (29%), Positives = 113/209 (54%), Gaps = 17/209 (8%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 +F+ VLG+VL+L R SR L +YIS F G+P+LV + + ++F P Sbjct: 35 LFAIVLGLVLAL--IRESRFV---VVSKLVEIYISLFR--GIPSLVQL---FIIYFGLPQ 84 Query: 251 L-GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309 L N + T + I S +A++AEI R+ L +V GQ EA +++G+ + Sbjct: 85 LFPSLNGLSAMTAA------IIGFSLKNSAYMAEIFRAALASVDFGQTEAGLSVGMNKVQ 138 Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369 R ++LPQAM + +P + +++L+K++S+A A+G ++L + G I ++ + E L+ Sbjct: 139 IYRRIVLPQAMLNALPATGNTFISLIKDTSVAFALGVSELFAEGKMIAAESLRFFETFLV 198 Query: 370 WMFIYLSLSIMIALFMNRLNAKIALKEKK 398 IY L ++ + ++L K++ ++ Sbjct: 199 VGLIYWLLIVVYSWLQSQLEKKLSHSRQR 227 >gi|190894697|ref|YP_001984990.1| putative amino acid ABC transporter permease [Rhizobium etli CIAT 652] gi|190700358|gb|ACE94440.1| probable amino acid ABC transporter, permease protein [Rhizobium etli CIAT 652] Length = 442 Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 40/115 (34%), Positives = 65/115 (56%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P +++ +AL +TAAF+AEI R + +V GQ EA+ +LG+ + R V+LPQA+R Sbjct: 307 PAWLAAGMALILWTAAFLAEIWRGCVESVASGQWEASASLGMGRLQQMRYVILPQALRVA 366 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378 IPP + ++K ++L +GF +L G + N T Q + + IY +L Sbjct: 367 IPPTVGFSVQIIKGTALTSIIGFVELSKAGTVVTNATFQPFTVYGLVALIYFALC 421 >gi|126736640|ref|ZP_01752380.1| amino acid ABC transporter, permease protein [Roseobacter sp. CCS2] gi|126713953|gb|EBA10824.1| amino acid ABC transporter, permease protein [Roseobacter sp. CCS2] Length = 432 Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 36/91 (39%), Positives = 62/91 (68%), Gaps = 1/91 (1%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I ++ ++AA+IAE++R GL A+P+GQ EAA +LGL + +A RL++LPQA++ IP + + Sbjct: 302 IMITMFSAAYIAEVIRGGLAALPKGQYEAADSLGLDYAQAMRLIILPQALKISIPGIVNV 361 Query: 331 YLNLLKNSSLAVAVGFADLVS-VGGTIINQT 360 + L K++ L + DL+ + G I++ T Sbjct: 362 AVGLFKDTVLVSVISMFDLLGMIRGPILSST 392 >gi|190015056|ref|YP_001966754.1| amino acid ABC transporter, permease protein [Bacillus cereus] gi|190015322|ref|YP_001967078.1| amino acid ABC transporter, permease protein [Bacillus cereus] gi|116584732|gb|ABK00847.1| amino acid ABC transporter, permease protein [Bacillus cereus] gi|116585003|gb|ABK01112.1| amino acid ABC transporter, permease protein [Bacillus cereus] Length = 201 Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 51/175 (29%), Positives = 88/175 (50%), Gaps = 20/175 (11%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 + PLL F+ FGLP L PV+G++ V F++ + Sbjct: 43 RGTPLLLQLLFICFGLPLL-------------PVIGEY------LVMDRFVAACLGFILN 83 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 AA+ AEI R GL+A+ +GQ EA+ LGL+ + R V+LPQ R +P + ++ + L+K Sbjct: 84 YAAYFAEIFRGGLLAIDKGQYEASQVLGLSKWQTMRRVILPQMFRIALPAVANESVTLIK 143 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 +++L AV +L+ T +N+ I + IYL +++++ +F L + Sbjct: 144 DTALLYAVAVPELLHFAQTAVNRDF-TITPFFVAGLIYLIMTLVLTMFFKWLERR 197 >gi|15894165|ref|NP_347514.1| amino acid ABC transporter permease [Clostridium acetobutylicum ATCC 824] gi|15023774|gb|AAK78854.1|AE007603_5 Amino acid ABC transporter permease component [Clostridium acetobutylicum ATCC 824] gi|325508293|gb|ADZ19929.1| Amino acid ABC transporter permease component [Clostridium acetobutylicum EA 2018] Length = 221 Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 65/190 (34%), Positives = 105/190 (55%), Gaps = 25/190 (13%) Query: 168 GMFLNNRGLSFPTLTMDTNAKIF--VFSFVLGIVLSLFATRLS--RHFHEKTGKALPLLY 223 G FLN SFP L + IF V S ++G+V+ AT L+ + K + +Y Sbjct: 6 GYFLN----SFPDLLKYIHYTIFMAVISTIIGLVI---ATILAPIKMLKIKGLSQVIGVY 58 Query: 224 ISTFLIFGLPTLV-LIALKYQL-HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281 IS F G P LV L Y L KP+ V+P ++ + LS +A++ Sbjct: 59 ISFFR--GTPLLVQLFVFYYGLPQLIKPL---------KNVTP-LEAMILGLSLCGSAYM 106 Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341 AEI+R + +V +GQMEAA+++G+T +A ++ PQA+R IP + +Q+++LLK+SSLA Sbjct: 107 AEIIRGAIESVEKGQMEAALSVGMTKFQAFTRIIYPQAIRVAIPGIGNQFVDLLKSSSLA 166 Query: 342 VAVGFADLVS 351 +G ++++ Sbjct: 167 FVLGLTEILA 176 >gi|126466428|ref|YP_001041537.1| polar amino acid ABC transporter, inner membrane subunit [Staphylothermus marinus F1] gi|126015251|gb|ABN70629.1| polar amino acid ABC transporter, inner membrane subunit [Staphylothermus marinus F1] Length = 229 Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 45/122 (36%), Positives = 72/122 (59%) Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329 ++ + +AA+ +E +RS + AVPRGQ EAA+++G+T +A ++ P A+RS IP LT+ Sbjct: 95 FLGMGLNSAAYQSEYLRSSIKAVPRGQWEAALSIGMTRWQAMTSIIAPIALRSSIPALTN 154 Query: 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 + + LLK SSLA + +LV G I T ++I I IY +LS ++ M + Sbjct: 155 ELVYLLKYSSLAYFLTVIELVYAGKIIGAATFAYLQIYTIIAIIYFALSYIMMRIMKIIE 214 Query: 390 AK 391 K Sbjct: 215 KK 216 >gi|319942012|ref|ZP_08016331.1| hypothetical protein HMPREF9464_01550 [Sutterella wadsworthensis 3_1_45B] gi|319804396|gb|EFW01274.1| hypothetical protein HMPREF9464_01550 [Sutterella wadsworthensis 3_1_45B] Length = 221 Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 56/190 (29%), Positives = 101/190 (53%), Gaps = 14/190 (7%) Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252 SF +G+V+++ A L R KT PL I ++ G P LV + + + F P +G Sbjct: 31 SFAIGLVVAV-AIALIRT--AKTPVLEPLARIYVWIFRGTPALVQL---FVIFFGLPSIG 84 Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312 V F S IA S A+ +E +R+ + AVP+GQ+EA + +G++ + Sbjct: 85 --------IVIDAFPSAVIAFSLNVGAYASEALRAAISAVPKGQLEAGLCVGMSWTQTMF 136 Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372 ++LPQA R+ PPL +++++L+KN+SLA ++ ++ I +T + + L Sbjct: 137 RIVLPQAFRTAFPPLFNEFISLVKNTSLASSITVYEMFMSAQRIAARTYEPFWLYLEAAV 196 Query: 373 IYLSLSIMIA 382 IYL+ + +++ Sbjct: 197 IYLAFTTILS 206 >gi|241895475|ref|ZP_04782771.1| ABC superfamily ATP binding cassette transporter, membrane protein [Weissella paramesenteroides ATCC 33313] gi|241871449|gb|EER75200.1| ABC superfamily ATP binding cassette transporter, membrane protein [Weissella paramesenteroides ATCC 33313] Length = 235 Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 53/184 (28%), Positives = 96/184 (52%), Gaps = 30/184 (16%) Query: 193 SFVLGIVLSLFAT--RLSR------------HFHEKTGKALPLLYISTFLIFGLPTLVLI 238 SF LG++L+L R+S+ +F+ ++ PLL + FGLP LV+ Sbjct: 27 SFALGLILALITALVRISQKGKEFKIIKGIFNFYVWLFRSTPLLVQLFIVYFGLPYLVIP 86 Query: 239 ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQME 298 + D+ G ++P F++ I S T A+ +E +R+ + +VP+GQ E Sbjct: 87 GI-----LDE----------GIKLTP-FVAGVITFSLNTGAYASETIRAAITSVPQGQWE 130 Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN 358 AA ++G+T + R ++LPQA+ +PPL + +++L+K++SLA + ++ V I Sbjct: 131 AASSIGMTRSQTLRRIILPQAIYLSVPPLANSFISLVKDTSLAATITIVEMFEVSQQIAA 190 Query: 359 QTGQ 362 + Q Sbjct: 191 ENYQ 194 >gi|222152518|ref|YP_002561693.1| glutamine ABC transporter glutamine-binding protein/permease [Streptococcus uberis 0140J] gi|222113329|emb|CAR40917.1| glutamine ABC transporter, glutamine-binding protein/permease protein [Streptococcus uberis 0140J] Length = 516 Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 38/120 (31%), Positives = 67/120 (55%) Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 +S T A++ EIVR G+ AV +GQ EAA ALG TH + R ++LPQ +R+I+P ++++ Sbjct: 384 VSINTGAYMTEIVRGGIFAVDKGQFEAATALGFTHGQTMRKIVLPQVVRNILPATGNEFV 443 Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 +K++S+ + +L G T+ Q Q + + IY L+ + + + +I Sbjct: 444 INIKDTSVLNVISVVELYFSGNTVATQNYQYFQTFSVIAVIYFILTFTVTRILRYVERRI 503 >gi|330432539|gb|AEC17598.1| glutamine ABC transporter permease protein [Gallibacterium anatis UMN179] Length = 249 Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 54/174 (31%), Positives = 94/174 (54%), Gaps = 17/174 (9%) Query: 191 VFSFVLGIVLSLFATRLS----RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246 + SF++G+V++L L +HF K AL YIS I G P L+A + + + Sbjct: 51 IISFIVGMVIALAIALLRVTPRKHFLHKIAYALSGFYISA--IRGTP---LLAQLFIIFY 105 Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306 P +G T+ P + IA S T A+ +E VR+ +++VP+GQ EA +G++ Sbjct: 106 ALPNVG-------ITLDP-LPTAIIAFSLNTGAYASETVRAAILSVPKGQWEAGYTIGMS 157 Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 + + ++ PQA+R +PPL++ ++ LLK +SLA V +++ I ++T Sbjct: 158 YWQNFFRIIAPQALRVAVPPLSNSFIGLLKETSLASVVLVPEMMRQANVISSRT 211 >gi|324009100|gb|EGB78319.1| ABC transporter, permease protein [Escherichia coli MS 57-2] Length = 347 Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 63/220 (28%), Positives = 107/220 (48%), Gaps = 28/220 (12%) Query: 132 YVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV 191 Y+ V+ I PLVV + +Y L + D + R TLT+ + Sbjct: 105 YIAVWAVIYPLVVWWLMYGGFLGL----DR---------VETRQWGGLTLTLIIASVGIA 151 Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251 + GI+L+L R H + L +++I + G+P LI + + P+ Sbjct: 152 GALPWGILLAL-----GRRSHMPIVRILSVIFIEFWR--GVP---LITVLFMSSVMLPL- 200 Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311 F+ T + + + + + +A++AE+VR GL A+P+GQ EAA +L L + K Sbjct: 201 ----FMAEGTSIDKLIRALVGVILFQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQ 256 Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 LV+LPQA++ +IP L + + L K++SL + +G DL S Sbjct: 257 GLVILPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFS 296 >gi|318603944|emb|CBY25442.1| glutamate aspartate transport system permease protein GltK [Yersinia enterocolitica subsp. palearctica Y11] Length = 369 Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 34/81 (41%), Positives = 55/81 (67%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + + + +A++AE+VR GL A+P+GQ EA +LGL + K LV+LPQA++ +IP L + Sbjct: 238 VGVVLFQSAYVAEVVRGGLQALPKGQTEATESLGLGYWKTQGLVILPQALKMVIPGLVNT 297 Query: 331 YLNLLKNSSLAVAVGFADLVS 351 + L K++SL + +G DL S Sbjct: 298 IIALFKDTSLVIIIGLFDLFS 318 >gi|138895922|ref|YP_001126375.1| amino acid ABC transporter permease [Geobacillus thermodenitrificans NG80-2] gi|134267435|gb|ABO67630.1| Amino acid ABC transporter (permease) [Geobacillus thermodenitrificans NG80-2] Length = 206 Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 37/89 (41%), Positives = 57/89 (64%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 F + IA+S A+++E VRS ++AV RGQ EAAIAL +T + RLV+LPQA+R ++ Sbjct: 72 SFWAGVIAVSLNYGAYVSETVRSCILAVDRGQHEAAIALNMTRFQRMRLVILPQAVRMML 131 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVG 353 P + + +LK++SL +G D+ G Sbjct: 132 PDFGNNLIQMLKSTSLVSLIGLTDITYAG 160 >gi|324324591|gb|ADY19851.1| amino acid ABC transporter, permease protein [Bacillus thuringiensis serovar finitimus YBT-020] Length = 217 Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 32/92 (34%), Positives = 60/92 (65%) Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 ALS + I EIVR L ++P+GQ+EA ++G+ ++ + VL+PQA+R +IP + + Sbjct: 96 ALSLWGITEIGEIVRGALQSLPKGQVEAGKSIGMNKKQLYQYVLIPQAIRRMIPATINIF 155 Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363 + +++ +SL V +G +++ G I+ +TG+A Sbjct: 156 IRIIQTTSLTVLIGVTEVIKAGQQIVERTGEA 187 >gi|241894752|ref|ZP_04782048.1| glutamate superfamily ATP binding cassette transporter, membrane protein [Weissella paramesenteroides ATCC 33313] gi|241871964|gb|EER75715.1| glutamate superfamily ATP binding cassette transporter, membrane protein [Weissella paramesenteroides ATCC 33313] Length = 483 Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 50/176 (28%), Positives = 84/176 (47%), Gaps = 23/176 (13%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 + LP+L ++ F+ G+P L G + P F + I L Sbjct: 330 RGLPMLVLAFFIYIGIPNLT----------------------GQKI-PAFTAGVITLILN 366 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 A+I V G +V GQ+EAA +LGL + KA R V++PQ +R +IP +Q++ LK Sbjct: 367 EGAYIGAFVSGGFKSVDSGQLEAARSLGLPYGKAMRKVVMPQGIRLMIPSFINQFIITLK 426 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 ++S+ A+G +L G II + Q + L+ +YL + ++ N + +I Sbjct: 427 DTSILSAIGIIELTQTGTLIIARNLQGFRVWLMIAVLYLIVITLLTWLSNWVEKRI 482 >gi|299820601|ref|ZP_07052491.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Listeria grayi DSM 20601] gi|299818096|gb|EFI85330.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Listeria grayi DSM 20601] Length = 213 Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 32/92 (34%), Positives = 60/92 (65%) Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 AA+ AEI R G++++ +GQ E+A LGL++ + R ++LPQ ++ ++P + ++ +NL+K+ Sbjct: 96 AAYFAEIFRGGILSIEKGQYESAKVLGLSYGQTVRKIVLPQVIKRVLPAIGNEVINLVKD 155 Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369 SSL +G DL+ G N+ I ++L+ Sbjct: 156 SSLVYVLGLGDLLRAGKIASNRDVTLIPLVLV 187 >gi|34496728|ref|NP_900943.1| glutamine transport system permease [Chromobacterium violaceum ATCC 12472] gi|34102583|gb|AAQ58948.1| glutamine transport system permease protein [Chromobacterium violaceum ATCC 12472] Length = 227 Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 36/96 (37%), Positives = 62/96 (64%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P +++ +AL+ +A++ + V +GL AV RGQ A +ALG + + R ++LPQA+R + Sbjct: 94 PGLLTVILALALIHSAYLGQAVLAGLTAVGRGQWHAGLALGFSRWQTLRWLILPQALRIM 153 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359 +P +Q+++LLK+SSLA VG A+ V + N+ Sbjct: 154 LPSFINQWVSLLKDSSLAYIVGVAEFTFVATQVNNR 189 >gi|73661928|ref|YP_300709.1| putative ABC-type amino acid transport system permease component [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] gi|72494443|dbj|BAE17764.1| putative ABC-type amino acid transport system permease component [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] Length = 227 Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 51/160 (31%), Positives = 92/160 (57%), Gaps = 11/160 (6%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 +F+ +LG +L+ RL +K P++ + I P L+ + L Y F P Sbjct: 29 IFALILGFILA--TIRL-----QKIKLLSPVVKVYISFIRSTPLLLQLFLVY---FALPQ 78 Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 L F I + S F + +A + +T A+++EI+R+G +V Q+EA +++GLT+ + Sbjct: 79 LLLFVHIDINHFSRLFFVI-LAFTLHTGAYLSEIIRAGYQSVDYRQIEAGLSIGLTYPRI 137 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 + ++LPQA+R+ IP LT+Q + L+K++SLA +G D++ Sbjct: 138 LKEIILPQALRNSIPNLTTQIIELVKDTSLAFTIGIIDMM 177 >gi|83941462|ref|ZP_00953924.1| ABC glutamate/glutamine/aspartate/asparagine transporter, inner membrane subunit BztC [Sulfitobacter sp. EE-36] gi|83847282|gb|EAP85157.1| ABC glutamate/glutamine/aspartate/asparagine transporter, inner membrane subunit BztC [Sulfitobacter sp. EE-36] Length = 431 Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 37/91 (40%), Positives = 61/91 (67%), Gaps = 1/91 (1%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I ++ + +A+IAE++R GL A+PRGQ EAA +LGL + +A RL++LPQA++ IP + + Sbjct: 301 IMITMFASAYIAEVIRGGLAALPRGQYEAADSLGLDYAQAMRLIILPQALKISIPGIVNV 360 Query: 331 YLNLLKNSSLAVAVGFADLVS-VGGTIINQT 360 + L K+++L + DLV + G I+ T Sbjct: 361 AVGLFKDTTLVSIISMFDLVGMIRGPILAST 391 >gi|298291389|ref|YP_003693328.1| polar amino acid ABC transporter inner membrane subunit [Starkeya novella DSM 506] gi|296927900|gb|ADH88709.1| polar amino acid ABC transporter, inner membrane subunit [Starkeya novella DSM 506] Length = 458 Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 30/81 (37%), Positives = 58/81 (71%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + ++ ++AA++AE++R GL A+P+GQ E A+A+GLT + RL++LPQA+ +IP + + Sbjct: 326 VGVALFSAAYMAEVIRGGLQAIPKGQYEGAMAVGLTWSQMMRLIILPQALTLVIPGIVNS 385 Query: 331 YLNLLKNSSLAVAVGFADLVS 351 +++L K+++L + V D + Sbjct: 386 FISLFKDTTLVLIVSIFDFLG 406 >gi|326780213|ref|ZP_08239478.1| polar amino acid ABC transporter, inner membrane subunit [Streptomyces cf. griseus XylebKG-1] gi|326660546|gb|EGE45392.1| polar amino acid ABC transporter, inner membrane subunit [Streptomyces cf. griseus XylebKG-1] Length = 305 Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 39/128 (30%), Positives = 76/128 (59%), Gaps = 3/128 (2%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + L+ + AA+ AEIVR G++AV GQ+EAA ALG+ + R ++LPQAMRSI+P ++ Sbjct: 178 LGLALHQAAYAAEIVRGGVLAVGGGQLEAASALGIPKLRQLRRIVLPQAMRSILPNAANE 237 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI---WMFIYLSLSIMIALFMNR 387 ++L K +S+ + +L + ++G+ + ++++ W + + ++ ++ R Sbjct: 238 IISLFKGTSIVSVMAIGELFYQVQVVYGRSGRVVPLLMVATAWYILLTTALSIVQYYVER 297 Query: 388 LNAKIALK 395 AK A++ Sbjct: 298 HYAKGAVR 305 >gi|288961594|ref|YP_003451904.1| polar amino acid transport system permease protein [Azospirillum sp. B510] gi|288913874|dbj|BAI75360.1| polar amino acid transport system permease protein [Azospirillum sp. B510] Length = 284 Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 41/121 (33%), Positives = 72/121 (59%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +ALS A+++EI R+G+ +V GQ EAA+ALGL+ + V+LPQA R +IPP +Q Sbjct: 157 LALSLNYGAYLSEIFRAGVQSVAPGQREAAMALGLSRGQIAWTVILPQATRFVIPPTGAQ 216 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++ +LK+SSL G ++ + + + + +E++L +Y LS++ +RL Sbjct: 217 FVAMLKDSSLVSVTGLWEINFLAQSYGRSSYRYVEMLLTAAVVYWMLSLIFEHVQSRLEV 276 Query: 391 K 391 + Sbjct: 277 R 277 >gi|312868037|ref|ZP_07728241.1| ABC transporter, permease protein [Streptococcus parasanguinis F0405] gi|311096441|gb|EFQ54681.1| ABC transporter, permease protein [Streptococcus parasanguinis F0405] Length = 520 Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 40/109 (36%), Positives = 64/109 (58%) Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 +S T A+++EIVR G++AV GQ EAA ALG+TH + R V+LPQ +R+I+P ++++ Sbjct: 383 VSINTGAYMSEIVRGGILAVDPGQFEAATALGMTHGQTMRKVVLPQVVRNILPATGNEFV 442 Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 +K++S+ + +L G T+ Q Q I IY L+ I Sbjct: 443 INIKDTSVLNVISVVELYFTGNTVATQNYQYFPTFTIIAVIYFILTFTI 491 >gi|298486874|ref|ZP_07004930.1| Amino acid ABC transporter permease protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298158741|gb|EFH99805.1| Amino acid ABC transporter permease protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|320324338|gb|EFW80417.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. glycinea str. B076] gi|320328539|gb|EFW84541.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. glycinea str. race 4] Length = 324 Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 69/212 (32%), Positives = 103/212 (48%), Gaps = 18/212 (8%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF--DK 248 VFS +LG L+L RLS AL YI F +P L+++ + Y + D Sbjct: 96 VFSIILGTALAL--ARLS---GSPLLAALAWGYIWFFR--SMPALLVLIILYNFAYLYDH 148 Query: 249 PVLG----QFNFIGGSTVS--PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302 VLG F STV +F + LS AA+ AEI+R GLI V GQ EAA A Sbjct: 149 IVLGVPFTDLVFAEWSTVDVLSQFTVAVLGLSLMQAAYTAEIIRGGLIGVDAGQHEAAAA 208 Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362 LGL + ++LPQA+RSI+P ++ + L+K +S+ + +L I N+T Sbjct: 209 LGLPASRRVFRIILPQALRSILPSGFNEIIGLVKGTSIVYVLALPELFYTVQVIYNRTQA 268 Query: 363 AIEIIL---IWMFIYLSLSIMIALFMNRLNAK 391 I +++ +W I +L ++ R A+ Sbjct: 269 VIPLLIVATVWYLIITTLLTSAQYYVERHFAR 300 >gi|148653870|ref|YP_001280963.1| polar amino acid ABC transporter inner membrane subunit [Psychrobacter sp. PRwf-1] gi|148572954|gb|ABQ95013.1| polar amino acid ABC transporter, inner membrane subunit [Psychrobacter sp. PRwf-1] Length = 246 Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 60/214 (28%), Positives = 104/214 (48%), Gaps = 22/214 (10%) Query: 188 KIFVFSFVLGIVLSLFAT--RLSRHF--------HEKTGKALPLLYISTFLIFGLPTLVL 237 K+ + S +G+VL L +LS+ + + T + +P L + FL +G L++ Sbjct: 20 KLALSSLAIGLVLGLLGATAKLSKIWILRKLATVYTATMRGIPELLLVLFLYYGGSMLIM 79 Query: 238 IALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQM 297 +L +F + VSP F++ +ALS A+ E+ R + +P+GQ Sbjct: 80 -----------AILQKFGYNDYVEVSP-FLAGVLALSIAFGAYATEVFRMAIQEIPKGQW 127 Query: 298 EAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII 357 EAA A+G+ + +++PQ R +P L + +L LLK+++L VG D++ Sbjct: 128 EAAEAIGMKPMQLYFRIIVPQVWRLALPGLGNLFLVLLKDTALVSVVGLKDIMYHAARGA 187 Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 T QA + FIYL L+I++ FM L + Sbjct: 188 QATQQAFTFYMAAAFIYLGLTIVVTAFMMWLEWR 221 >gi|321313515|ref|YP_004205802.1| putative ABC transporter permease [Bacillus subtilis BSn5] gi|320019789|gb|ADV94775.1| putative ABC transporter (permease) [Bacillus subtilis BSn5] Length = 224 Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 59/190 (31%), Positives = 100/190 (52%), Gaps = 15/190 (7%) Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256 G++L+L H+ L LYIS F G+PTLV + L +++ P L F Sbjct: 38 GLILALITKNKIPVLHQ-----LSKLYISFFR--GVPTLVQLFL---IYYGLPQL--FPE 85 Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316 + T + I LS AA++AEI R+ L +V GQ+EA +++G+T +A R ++L Sbjct: 86 MSKMTA---LTAAIIGLSLKNAAYLAEIFRAALNSVDDGQLEACLSVGMTKFQAYRRIIL 142 Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376 PQA+R+ IP + ++ LLK +SLA +G ++ + G + + E L +Y Sbjct: 143 PQAIRNAIPATGNTFIGLLKETSLAFTLGVMEMFAQGKMYASGNLKYFETYLAVAIVYWV 202 Query: 377 LSIMIALFMN 386 L+I+ ++ + Sbjct: 203 LTIIYSMLQD 212 >gi|255598386|ref|XP_002536997.1| abc transporter, putative [Ricinus communis] gi|223517868|gb|EEF25387.1| abc transporter, putative [Ricinus communis] Length = 390 Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 41/113 (36%), Positives = 64/113 (56%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F S IALS A++AEI+RSGL AV +GQ A +ALG++ R +++PQA R ++P Sbjct: 5 FASAVIALSLNEGAYMAEIIRSGLQAVKKGQRTAGLALGMSRFAVMRYIVIPQAARIVLP 64 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378 P +Q + +LK S+L V +L+ V + + E + YL+L+ Sbjct: 65 PTGNQMIGMLKTSALVSVVAVEELLLVANQTASSNFKYFEALTAAGIYYLALT 117 >gi|153939214|ref|YP_001390775.1| His/Glu/Gln/Arg/opine ABC transporter permease [Clostridium botulinum F str. Langeland] gi|170756000|ref|YP_001781066.1| His/Glu/Gln/Arg/opine ABC transporter permease [Clostridium botulinum B1 str. Okra] gi|152935110|gb|ABS40608.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Clostridium botulinum F str. Langeland] gi|169121212|gb|ACA45048.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Clostridium botulinum B1 str. Okra] gi|295318847|gb|ADF99224.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Clostridium botulinum F str. 230613] Length = 219 Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 39/124 (31%), Positives = 72/124 (58%), Gaps = 3/124 (2%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I L+ AA+++EI+R+ +I++ RGQ EA +LG T + ++LPQA + +PPL + Sbjct: 94 IGLALNGAAYMSEIIRAAIISIDRGQEEAGFSLGYTRLQNLCYIILPQAAQISVPPLVNG 153 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL---FMNR 387 + +LLK++SL + +L G I ++T + E+ L Y L+ ++++ F+ + Sbjct: 154 FSSLLKDTSLISVISITELTRSGNLIYSRTARPFEVYLTLGLFYFVLTYIVSICSKFIEK 213 Query: 388 LNAK 391 N K Sbjct: 214 RNEK 217 >gi|94986086|ref|YP_605450.1| amino acid ABC transporter permease [Deinococcus geothermalis DSM 11300] gi|94556367|gb|ABF46281.1| amino acid ABC transporter membrane protein, PAAT family [Deinococcus geothermalis DSM 11300] Length = 223 Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 44/125 (35%), Positives = 76/125 (60%), Gaps = 1/125 (0%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G TVSP + AL+ +AA+++E +R+ +++VPRGQ EAA +LGLT R+ +L++LPQ Sbjct: 87 GITVSP-LVGGVAALTLNSAAYLSETIRAAILSVPRGQWEAAYSLGLTPRQTLQLIVLPQ 145 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378 A R +P L + + L+K++SL + +L+ +I +T + L IY ++S Sbjct: 146 AARVALPSLGNTLIGLVKDTSLVSVITVVELLRSAQLVIARTFEPFGPYLAAALIYWAIS 205 Query: 379 IMIAL 383 ++ L Sbjct: 206 SLLEL 210 >gi|260463339|ref|ZP_05811540.1| polar amino acid ABC transporter, inner membrane subunit [Mesorhizobium opportunistum WSM2075] gi|259030929|gb|EEW32204.1| polar amino acid ABC transporter, inner membrane subunit [Mesorhizobium opportunistum WSM2075] Length = 385 Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 31/88 (35%), Positives = 60/88 (68%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 +++ I +S + AA++AE+VR GL A+P+GQ E A +LGL + + L++LPQA++ +I Sbjct: 247 KYLRALIGVSLFAAAYMAEVVRGGLQAIPKGQYEGADSLGLGYWQKMSLIVLPQALKLVI 306 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSV 352 P + + ++ + K++SL + + DL+ + Sbjct: 307 PGIVNTFIGMFKDTSLVLIISMFDLLGI 334 Score = 36.2 bits (82), Expect = 8.4, Method: Compositional matrix adjust. Identities = 21/72 (29%), Positives = 39/72 (54%), Gaps = 5/72 (6%) Query: 77 VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136 +P+ S + G + T L+F G+ + +GT++ GR S +V +C +++E Sbjct: 165 LPHVETSRWG-----GLLITLSLSFVGIAVSLPLGTVLALGRRSKMPIVKMLCVIFIEAV 219 Query: 137 RNIPPLVVIFFL 148 R IP + V+FF+ Sbjct: 220 RGIPLITVLFFV 231 >gi|239940211|ref|ZP_04692148.1| putative ABC transporter permease protein [Streptomyces roseosporus NRRL 15998] gi|291443641|ref|ZP_06583031.1| ABC amino acid transporter [Streptomyces roseosporus NRRL 15998] gi|291346588|gb|EFE73492.1| ABC amino acid transporter [Streptomyces roseosporus NRRL 15998] Length = 297 Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 40/128 (31%), Positives = 78/128 (60%), Gaps = 3/128 (2%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + L+ + AA+ AEIVR G++AV GQ+EAA ALG+ + R ++LPQAMRSI+P ++ Sbjct: 170 LGLALHQAAYAAEIVRGGVLAVGSGQLEAAAALGIPKFRQLRRIVLPQAMRSILPNAANE 229 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL---FMNR 387 ++L K +S+ + +L + + G+ + ++++ Y+ L+ ++++ ++ R Sbjct: 230 IISLFKGTSIVSVMAIGELFYQVQVVYGRNGRVVPLLMVATAWYILLTTVLSVLQHYVER 289 Query: 388 LNAKIALK 395 AK A++ Sbjct: 290 HYAKGAVR 297 >gi|71736000|ref|YP_274549.1| amino acid ABC transporter permease [Pseudomonas syringae pv. phaseolicola 1448A] gi|71556553|gb|AAZ35764.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. phaseolicola 1448A] Length = 324 Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 69/212 (32%), Positives = 103/212 (48%), Gaps = 18/212 (8%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF--DK 248 VFS +LG L+L RLS AL YI F +P L+++ + Y + D Sbjct: 96 VFSIILGTALAL--ARLS---GSPLLAALAWGYIWFFR--SMPALLVLIILYNFAYLYDH 148 Query: 249 PVLG----QFNFIGGSTVS--PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302 VLG F STV +F + LS AA+ AEI+R GLI V GQ EAA A Sbjct: 149 IVLGVPFTDLVFAEWSTVDVLSQFTVAVLGLSLMQAAYTAEIIRGGLIGVDAGQHEAAAA 208 Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362 LGL + ++LPQA+RSI+P ++ + L+K +S+ + +L I N+T Sbjct: 209 LGLPASRRVFRIILPQALRSILPSGFNEIIGLVKGTSIVYVLALPELFYTVQVIYNRTQA 268 Query: 363 AIEIIL---IWMFIYLSLSIMIALFMNRLNAK 391 I +++ +W I +L ++ R A+ Sbjct: 269 VIPLLIVATVWYLIITTLLTSAQYYVERHFAR 300 >gi|302868837|ref|YP_003837474.1| polar amino acid ABC transporter inner membrane subunit [Micromonospora aurantiaca ATCC 27029] gi|315504694|ref|YP_004083581.1| polar amino acid abc transporter, inner membrane subunit [Micromonospora sp. L5] gi|302571696|gb|ADL47898.1| polar amino acid ABC transporter, inner membrane subunit [Micromonospora aurantiaca ATCC 27029] gi|315411313|gb|ADU09430.1| polar amino acid ABC transporter, inner membrane subunit [Micromonospora sp. L5] Length = 325 Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 37/75 (49%), Positives = 54/75 (72%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 FM+ + L+ AA++AEIVR+G+ +V GQ EAA ALGL+ + R V+LPQAMR IIP Sbjct: 169 FMAGLLGLALSEAAYMAEIVRAGIQSVDPGQTEAAQALGLSRAQLLRRVVLPQAMRVIIP 228 Query: 326 PLTSQYLNLLKNSSL 340 P ++ + +LK++SL Sbjct: 229 PTGNETIAMLKDTSL 243 >gi|163800419|ref|ZP_02194320.1| arginine ABC transporter, permease protein [Vibrio sp. AND4] gi|159175862|gb|EDP60656.1| arginine ABC transporter, permease protein [Vibrio sp. AND4] Length = 229 Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 46/134 (34%), Positives = 78/134 (58%), Gaps = 1/134 (0%) Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321 VSP F+S +ALS A++ ++ +R L AV RGQ EAA ALG++ +A ++LPQA+R Sbjct: 87 VSP-FLSGVVALSLIFASYASQTLRGALKAVGRGQSEAASALGISQTQAFVCIVLPQAIR 145 Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 +P LT+Q+L LLK+++L +G DL+ T +A IYL ++++ Sbjct: 146 HALPGLTNQWLVLLKDTALVSLIGVTDLLKQAQLTSAATHEAFTWYATAAAIYLVITLVT 205 Query: 382 ALFMNRLNAKIALK 395 + ++ K +++ Sbjct: 206 QRVVKMIDKKFSIQ 219 >gi|167725481|ref|ZP_02408717.1| glutamine ABC transporter permease protein [Burkholderia pseudomallei DM98] gi|217424148|ref|ZP_03455647.1| glutamine ABC transporter, permease protein [Burkholderia pseudomallei 576] gi|237508257|ref|ZP_04520972.1| glutamine ABC transporter, permease protein [Burkholderia pseudomallei MSHR346] gi|254186972|ref|ZP_04893487.1| glutamine ABC transporter, permease protein [Burkholderia pseudomallei Pasteur 52237] gi|254263010|ref|ZP_04953875.1| glutamine ABC transporter, permease protein [Burkholderia pseudomallei 1710a] gi|157934655|gb|EDO90325.1| glutamine ABC transporter, permease protein [Burkholderia pseudomallei Pasteur 52237] gi|217392613|gb|EEC32636.1| glutamine ABC transporter, permease protein [Burkholderia pseudomallei 576] gi|235000462|gb|EEP49886.1| glutamine ABC transporter, permease protein [Burkholderia pseudomallei MSHR346] gi|254214012|gb|EET03397.1| glutamine ABC transporter, permease protein [Burkholderia pseudomallei 1710a] Length = 235 Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 56/186 (30%), Positives = 94/186 (50%), Gaps = 17/186 (9%) Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252 F++G++ +F R + L +YI LI G P +V + L+F P+L Sbjct: 50 GFLVGMIAGMF-----RAYGPAVLNVLAQVYIE--LIRGTPIVVQVMF---LYFALPLLA 99 Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312 G S +A++ + A++AE+VR L+++P+G EA +A+GL+ + Sbjct: 100 HVRIDGLSAA-------VVAITLNSGAYLAEVVRGALLSIPKGLTEAGLAMGLSMPRVLV 152 Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372 ++ P A R +I PL +Q + LK++SL + +G +L G II QA+EI Sbjct: 153 KIVGPLAFRRLIAPLGNQCIVSLKDTSLFIVIGVGELTRKGQEIIAGNFQAVEIWTAVAA 212 Query: 373 IYLSLS 378 IYL L+ Sbjct: 213 IYLVLT 218 >gi|323485322|ref|ZP_08090671.1| hypothetical protein HMPREF9474_02422 [Clostridium symbiosum WAL-14163] gi|323694083|ref|ZP_08108262.1| hypothetical protein HMPREF9475_03125 [Clostridium symbiosum WAL-14673] gi|323401358|gb|EGA93707.1| hypothetical protein HMPREF9474_02422 [Clostridium symbiosum WAL-14163] gi|323501800|gb|EGB17683.1| hypothetical protein HMPREF9475_03125 [Clostridium symbiosum WAL-14673] Length = 221 Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 39/127 (30%), Positives = 77/127 (60%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IAL ++++AE++R+G+ AV +GQ EAA +LG+T ++LPQA+++I+P L ++ Sbjct: 95 IALIINASSYVAEVIRAGIQAVDKGQTEAARSLGMTGSHTMTQIILPQAIKNILPALGNE 154 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++ ++K +SLA +L + TI + T + +E ++I IYL ++ ++ M Sbjct: 155 FITMIKQASLASVFFINELTTSYKTISSATFRPVEALMIAGIIYLMVTTVLGKIMEYAEW 214 Query: 391 KIALKEK 397 ++ E+ Sbjct: 215 RMNRNER 221 Score = 37.7 bits (86), Expect = 2.8, Method: Compositional matrix adjust. Identities = 27/85 (31%), Positives = 39/85 (45%), Gaps = 2/85 (2%) Query: 83 SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142 Y L G T LA + T+IG ++ RLS K W R Y+ V R P L Sbjct: 10 DRYGFVYLQGLTGTLCLAAITVFFGTLIGMILAIMRLSRVKPFQWFVRFYIWVLRGTPIL 69 Query: 143 VVIFFLYKSVLSVLP--IPDHSIVL 165 + ++F + + VLP I D S ++ Sbjct: 70 LQLYFFWIFLPRVLPVKISDSSCII 94 >gi|29829029|ref|NP_823663.1| glutamate transporter permease [Streptomyces avermitilis MA-4680] gi|29606135|dbj|BAC70198.1| putative glutamate ABC transporter permease [Streptomyces avermitilis MA-4680] Length = 301 Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 63/222 (28%), Positives = 113/222 (50%), Gaps = 23/222 (10%) Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALK 241 T+ A V + LG VL + RLS H + +P+ + F +P L+L+ Sbjct: 71 TLKAAALSMVIAMPLGAVLGI--ARLSDHRWVR----VPVSIVVEFF-RAIPVLILMIFG 123 Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLY---IALSCYTAAFIAEIVRSGLIAVPRGQME 298 L+ + + VS + LY L Y A+ +AEIVR+G++++P+GQ E Sbjct: 124 VALYSEY-----------TNVSSDDRPLYAVVTGLVLYNASVLAEIVRAGILSLPKGQSE 172 Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV-GFADLVSVGGTII 357 AA+A+GL + R +LLPQA+ ++P + SQ + ++K+++L AV F++L++ G + Sbjct: 173 AAMAIGLRKNQVMRFILLPQAVTVMLPAIVSQLVVIVKDTALGGAVLTFSELLASVGPMS 232 Query: 358 NQTG-QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 G I I IY++++ + F + L ++ +K Sbjct: 233 GYYGANTIASFTIVALIYIAINFSLTTFASWLEGRLRRGKKS 274 Score = 36.6 bits (83), Expect = 7.2, Method: Compositional matrix adjust. Identities = 22/69 (31%), Positives = 37/69 (53%) Query: 79 YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138 ++S ++ T + G NT A M+ A +G ++G RLS ++ V + VE FR Sbjct: 54 FSSTEAWTTYLWPGLQNTLKAAALSMVIAMPLGAVLGIARLSDHRWVRVPVSIVVEFFRA 113 Query: 139 IPPLVVIFF 147 IP L+++ F Sbjct: 114 IPVLILMIF 122 >gi|320530102|ref|ZP_08031172.1| ABC transporter, permease protein [Selenomonas artemidis F0399] gi|320137535|gb|EFW29447.1| ABC transporter, permease protein [Selenomonas artemidis F0399] Length = 244 Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 43/106 (40%), Positives = 61/106 (57%), Gaps = 2/106 (1%) Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 A+I+E+ R+ AVPRGQ EAAI GL+ +A V+LPQA +P + +NLLK Sbjct: 102 GAYISEVFRAAYKAVPRGQYEAAICAGLSPVQAFAHVMLPQAAIVALPNFGNASINLLKE 161 Query: 338 SSLAVAVGFADLVSVGGTIINQT--GQAIEIILIWMFIYLSLSIMI 381 SLA +G DL+ G II Q IEI L M +Y ++ +++ Sbjct: 162 GSLAYTIGLIDLIGKGNLIIAQNFGAYGIEIYLACMLVYWAVVLLL 207 >gi|242241399|ref|YP_002989580.1| polar amino acid ABC transporter inner membrane subunit [Dickeya dadantii Ech703] gi|242133456|gb|ACS87758.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya dadantii Ech703] Length = 244 Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 38/136 (27%), Positives = 80/136 (58%), Gaps = 1/136 (0%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 PE ++ AL+ +A++A V++G+ A+ RGQ +A ++LG + R ++LPQA+R + Sbjct: 94 PEITTVVCALALIASAYLAHGVKAGIAAIGRGQWQAGLSLGFGRWRVLRYIVLPQALRMM 153 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG-QAIEIILIWMFIYLSLSIMIA 382 +P +Q+++L+K++SLA VG +L + + N++ +E+ L +Y L + + Sbjct: 154 VPSFINQWISLIKDTSLAYIVGVGELTFLATQVNNRSMVYPMEVFLFVALVYFLLCLTLD 213 Query: 383 LFMNRLNAKIALKEKK 398 L N ++ + + ++ Sbjct: 214 LAANAVSRRFHHRLRQ 229 >gi|228932271|ref|ZP_04095155.1| Amino acid ABC transporter [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228827396|gb|EEM73146.1| Amino acid ABC transporter [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] Length = 209 Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 48/157 (30%), Positives = 92/157 (58%), Gaps = 14/157 (8%) Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244 T + + +F++G++L+ T L+R + + + +Y+S +I G P LV + + + Sbjct: 10 TTIPLTLITFIIGLILATL-TALARISGSRILQWIARIYVS--IIRGTPLLVQL---FII 63 Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304 + P L V P + + I S A+ +EI+R+ ++++P+GQ EAA +G Sbjct: 64 FYGLPTLN-------VEVEP-YTAAVIGFSLNVGAYASEIIRASILSIPKGQWEAAYTIG 115 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341 +T+ +A + V+LPQA R IPPL++ +++L+K++SLA Sbjct: 116 MTYPQALKRVILPQATRVSIPPLSNTFISLVKDTSLA 152 Score = 38.9 bits (89), Expect = 1.5, Method: Compositional matrix adjust. Identities = 15/41 (36%), Positives = 26/41 (63%) Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 I+ TL R+S ++++ WI R+YV + R P LV +F ++ Sbjct: 24 ILATLTALARISGSRILQWIARIYVSIIRGTPLLVQLFIIF 64 >gi|261377615|ref|ZP_05982188.1| amino acid ABC transporter, permease protein [Neisseria cinerea ATCC 14685] gi|269146368|gb|EEZ72786.1| amino acid ABC transporter, permease protein [Neisseria cinerea ATCC 14685] Length = 219 Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 62/220 (28%), Positives = 105/220 (47%), Gaps = 34/220 (15%) Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHE------KTGKALPLLYISTFLIFGLPT 234 LT++ +A V S + G+ +++ R F+ + + PLL FL +GLP Sbjct: 19 LTLELSAYGIVLSLLFGLPVAVVTAYRIRPFYALARTYIELSRNTPLLIQLFFLYYGLP- 77 Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294 K + +D F IAL A+++AE +R+G++AVP+ Sbjct: 78 ------KMGIKWDG-----------------FTCGVIALVFLGASYMAEAIRAGILAVPK 114 Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354 GQ+EA A+GL + R V LPQA +P + + L L+K +S+ AVG A+L+ V Sbjct: 115 GQIEAGKAIGLNQFQVFRYVELPQAWAVAVPAIGANVLFLMKETSIVSAVGIAELLFVTK 174 Query: 355 TIINQTGQAIEIILI----WMFIYLSLSIMIALFMNRLNA 390 II + E + + ++ I L +S++ NR+ + Sbjct: 175 DIIGMDYKTNEALFLLFASYLIILLPVSLLARWAENRVRS 214 >gi|127514093|ref|YP_001095290.1| polar amino acid ABC transporter, inner membrane subunit [Shewanella loihica PV-4] gi|126639388|gb|ABO25031.1| polar amino acid ABC transporter, inner membrane subunit [Shewanella loihica PV-4] Length = 226 Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 43/123 (34%), Positives = 75/123 (60%), Gaps = 4/123 (3%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IA + A+I+EI+R+G+ AV +GQ EAA +LGL+ + V+LPQA+++I+P L ++ Sbjct: 101 IAFGLNSGAYISEIIRAGIQAVDKGQTEAARSLGLSQAVTMKEVILPQAIKNILPALGNE 160 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL----SIMIALFMN 386 ++ LLK +++ +G DL+ G I ++T + + IYL+L + M++ F Sbjct: 161 FIVLLKETAVIGFIGGVDLMRSGEIIRSRTFEDSVPLFTCALIYLALTYSFTFMLSKFEK 220 Query: 387 RLN 389 RL Sbjct: 221 RLK 223 >gi|298291727|ref|YP_003693666.1| polar amino acid ABC transporter inner membrane subunit [Starkeya novella DSM 506] gi|296928238|gb|ADH89047.1| polar amino acid ABC transporter, inner membrane subunit [Starkeya novella DSM 506] Length = 220 Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 65/198 (32%), Positives = 98/198 (49%), Gaps = 14/198 (7%) Query: 200 LSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGG 259 L+ F L R +T + L Y+ LI G P LV++ L + F +G FN Sbjct: 33 LAGFLVALGRVSPSRTVRLLAATYVQ--LIQGTPLLVIMFLSF---FGLAAIG-FN---- 82 Query: 260 STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319 +SP + +++ + AA++ EI R + AVPR Q EAA L L+ + V+LPQA Sbjct: 83 --ISP-LAAAGASMTIFVAAYLGEIWRGCIEAVPRPQWEAAEGLALSRSQRMVKVILPQA 139 Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379 +R PP + ++KN+SLA VGF +L G I N + I I +Y SL Sbjct: 140 IRIATPPTVGFMVQIIKNTSLASVVGFVELTRSGQIINNSMFEPFLIYSIIAVVYFSLCY 199 Query: 380 MIALFMNRLNAKIALKEK 397 ++ RL + AL++K Sbjct: 200 PLSRLSRRLE-RTALQKK 216 >gi|239986699|ref|ZP_04707363.1| putative ABC transporter permease protein [Streptomyces roseosporus NRRL 11379] Length = 297 Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 40/128 (31%), Positives = 78/128 (60%), Gaps = 3/128 (2%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + L+ + AA+ AEIVR G++AV GQ+EAA ALG+ + R ++LPQAMRSI+P ++ Sbjct: 170 LGLALHQAAYAAEIVRGGVLAVGSGQLEAAAALGIPKFRQLRRIVLPQAMRSILPNAANE 229 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL---FMNR 387 ++L K +S+ + +L + + G+ + ++++ Y+ L+ ++++ ++ R Sbjct: 230 IISLFKGTSIVSVMAIGELFYQVQVVYGRNGRVVPLLMVATAWYILLTTVLSVLQHYVER 289 Query: 388 LNAKIALK 395 AK A++ Sbjct: 290 HYAKGAVR 297 >gi|295111597|emb|CBL28347.1| amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Synergistetes bacterium SGP1] Length = 226 Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 36/101 (35%), Positives = 60/101 (59%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 F ++ I LS AA++ E +R + +V RGQ EA I++G+T + R +++PQA R + Sbjct: 90 SFWAVVIVLSLSFAAYMGENIRGAISSVDRGQFEAGISIGMTPWQTIRRIVIPQAARVAL 149 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365 P + + + NL K++SLA VG D+ S +N T + +E Sbjct: 150 PGMVNSFANLFKSTSLAFTVGVMDMTSCAKNEVNLTYRYLE 190 >gi|241666976|ref|YP_002985060.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240862433|gb|ACS60098.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 222 Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 44/121 (36%), Positives = 71/121 (58%), Gaps = 4/121 (3%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IAL A+ EI+R G+ ++P+GQMEA +ALGL + RL++L A+R+I P LTSQ Sbjct: 95 IALGINGGAYAIEIIRGGVQSIPKGQMEAGLALGLHKAQVFRLIILKPALRAIYPSLTSQ 154 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI----ALFMN 386 ++ L +S+A A+ +L SV I +++ ++ E+ Y +S ++ ALF Sbjct: 155 FVLLTLTTSIASAISAYELTSVSQRIESESFRSFEVYFTVTVFYFVISWLMMRIFALFSA 214 Query: 387 R 387 R Sbjct: 215 R 215 Score = 46.2 bits (108), Expect = 0.009, Method: Compositional matrix adjust. Identities = 28/61 (45%), Positives = 37/61 (60%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L+G + TF LA GM+ A +IG A R SA K W+ +VE+ RN P LV IFF+ Sbjct: 17 LLLGCLGTFLLAICGMLLAIVIGIGGVALRDSALKPARWLVIAFVELIRNTPFLVQIFFI 76 Query: 149 Y 149 Y Sbjct: 77 Y 77 >gi|297618710|ref|YP_003706815.1| polar amino acid ABC transporter, inner membrane subunit [Methanococcus voltae A3] gi|297377687|gb|ADI35842.1| polar amino acid ABC transporter, inner membrane subunit [Methanococcus voltae A3] Length = 220 Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 37/122 (30%), Positives = 72/122 (59%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + LS A+I+EIVR+ L+++P+GQ +A +LG++ ++ V++PQ +R +P L + Sbjct: 93 LGLSLNGGAYISEIVRASLLSIPKGQWDACSSLGMSKVQSLIYVIIPQTIRISMPSLMNS 152 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 + ++K SSL + +L VG I +T E+ ++ IYLS+ M++L + + Sbjct: 153 FSAIIKESSLVSVIAITELTRVGQLIYTKTSSPFEVYIVVAIIYLSVIGMVSLLSDLIEK 212 Query: 391 KI 392 ++ Sbjct: 213 RL 214 Score = 45.4 bits (106), Expect = 0.015, Method: Compositional matrix adjust. Identities = 32/87 (36%), Positives = 49/87 (56%), Gaps = 1/87 (1%) Query: 88 AILVGFVNTFWLAFSGMIPATIIGTLVGAGR-LSANKLVAWICRVYVEVFRNIPPLVVIF 146 A+ G V T +AF I A II +VG R L+ K V + R YVE+FR +P L+++F Sbjct: 13 ALFWGLVITLKIAFLSFIFAVIIAHIVGILRALNIPKPVDMLFRGYVEIFRGVPLLILLF 72 Query: 147 FLYKSVLSVLPIPDHSIVLPFGMFLNN 173 F+Y + S+ + D++ G+ LN Sbjct: 73 FIYYGLPSIGIVMDNTTAAVLGLSLNG 99 >gi|327468420|gb|EGF13905.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK330] Length = 228 Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 54/166 (32%), Positives = 87/166 (52%), Gaps = 6/166 (3%) Query: 233 PTLVLIALKYQLHFDKPVLGQ-FNFIGGSTVSPEFMSLYIALSCY---TAAFIAEIVRSG 288 P ++LI Y L +L Q F +G +F LY A Y T ++EI+RS Sbjct: 64 PPILLILFFYSLF--PSLLNQIFKSLGSQVDVFKFNPLYYAFIIYSLMTTGSLSEILRSA 121 Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348 ++ V +GQ+EAA A+GLT+ +A R ++ PQA+RS +P L + +NL+K +SL + D Sbjct: 122 ILTVDKGQLEAAQAIGLTNFQAYRRIVFPQALRSALPNLANLVINLVKGTSLVFVMTVKD 181 Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394 + ++ + + Q E L+ IYL + +I L + AL Sbjct: 182 ITALAKIEASHSYQYSESYLVIFVIYLIICGLIQWMFRGLEKRYAL 227 >gi|332163170|ref|YP_004299747.1| ABC transporter permease [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|325667400|gb|ADZ44044.1| ABC transporter permease [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|330862827|emb|CBX72968.1| inner membrane amino-acid ABC transporter permease protein yhdY [Yersinia enterocolitica W22703] Length = 367 Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 34/81 (41%), Positives = 55/81 (67%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + + + +A++AE+VR GL A+P+GQ EA +LGL + K LV+LPQA++ +IP L + Sbjct: 236 VGVVLFQSAYVAEVVRGGLQALPKGQTEATESLGLGYWKTQGLVILPQALKMVIPGLVNT 295 Query: 331 YLNLLKNSSLAVAVGFADLVS 351 + L K++SL + +G DL S Sbjct: 296 IIALFKDTSLVIIIGLFDLFS 316 >gi|307546907|ref|YP_003899386.1| ABC transporter permease [Halomonas elongata DSM 2581] gi|307218931|emb|CBV44201.1| ABC-type transport system permease protein [Halomonas elongata DSM 2581] Length = 364 Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 40/112 (35%), Positives = 70/112 (62%), Gaps = 8/112 (7%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I + + +A++AE+VR GL A+P GQ EAA ALG+ + + L++LPQA++ +IP + + Sbjct: 236 IGIMFFWSAYMAEVVRGGLQAIPSGQEEAAKALGMGYWRRMGLIVLPQALKLVIPGIVNT 295 Query: 331 YLNLLKNSSLAVAVGFADLVSV---GGTIINQTGQAIE-----IILIWMFIY 374 ++ L K++SL + +G DL+++ G T N G A E ++ W+F + Sbjct: 296 FIALFKDTSLVLIIGLFDLLAIIRAGLTDSNWLGFATEGYVFAALMFWVFCF 347 >gi|172063350|ref|YP_001811001.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria MC40-6] gi|171995867|gb|ACB66785.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria MC40-6] Length = 594 Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 45/137 (32%), Positives = 80/137 (58%), Gaps = 4/137 (2%) Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321 +SP F++ + L+ AAF AE++R G++AV +GQ+EAA ALGL + T ++LPQAMR Sbjct: 163 ISP-FLAAVLGLTLNHAAFSAEVIRGGILAVDQGQLEAAAALGLPRGRQTTRIVLPQAMR 221 Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL---IWMFIYLSLS 378 +I+P + ++L K +S+ + +L I + + I +++ +W I L++ Sbjct: 222 AILPTAFNDLISLAKGTSMVYVLAMPELFYTVQVIYRRNLEVIPLLMVATVWYLIILTVL 281 Query: 379 IMIALFMNRLNAKIALK 395 I + + R A+ AL+ Sbjct: 282 STIQVQVERHYARGALR 298 >gi|325523728|gb|EGD01988.1| putative ABC transporter permease [Burkholderia sp. TJI49] Length = 255 Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 58/206 (28%), Positives = 106/206 (51%), Gaps = 10/206 (4%) Query: 195 VLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQF 254 VLG+V++L R + + L Y+ +++ G P LV I Y F + +F Sbjct: 39 VLGLVVALM-----RSSSNRALQVLARGYV--WVMRGTPLLVQIVFLYT-AFAAANVFRF 90 Query: 255 NFI--GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312 + + G T+ + +AL +AA++AEI+R+GL +V RGQ EA+ +LG+ R Sbjct: 91 HDLDFGWITLPGNIQAAVLALGMNSAAYMAEIIRAGLGSVDRGQYEASRSLGMPTMLLMR 150 Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372 ++LPQA+R I+PP+ ++ +LKN++L +G +L+ I + + E+ L+ Sbjct: 151 RIVLPQALRVIVPPMGNEVNVMLKNTTLVSVIGVQELLLSTQMITSVNFRVFELYLVLAI 210 Query: 373 IYLSLSIMIALFMNRLNAKIALKEKK 398 +L L+ + R+ A + + Sbjct: 211 YFLLLTTLWGFVQRRIEAHFGRGDAR 236 >gi|300741911|ref|ZP_07071932.1| glutamate permease [Rothia dentocariosa M567] gi|311111807|ref|YP_003983029.1| glutamine ABC transporter membrane protein [Rothia dentocariosa ATCC 17931] gi|300381096|gb|EFJ77658.1| glutamate permease [Rothia dentocariosa M567] gi|310943301|gb|ADP39595.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Rothia dentocariosa ATCC 17931] Length = 227 Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 59/211 (27%), Positives = 102/211 (48%), Gaps = 24/211 (11%) Query: 193 SFVLGIVLSLF------ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246 SFVLG +L+L + R + + + PL + T + G+ T ++QL F Sbjct: 34 SFVLGAILALMRISPVPSLRWAGTIYVHLFRNTPLTILMTLALLGVWT------QFQLSF 87 Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306 + NF F+ I LS Y A+F+ E +RSG+ VP GQ EAA A+GL Sbjct: 88 STDF--ETNF---------FVYAVIVLSIYHASFVCEAIRSGVNTVPTGQAEAARAIGLG 136 Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN-QTGQAIE 365 R+++ PQA+R I PL + + L KN+++A A+ + ++I + Sbjct: 137 FMDTARMIIFPQALRGSITPLGNTLIALAKNTTVASVASVAEASGMMKSMIEFDANMVLA 196 Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 I LI+ ++++ + + + + K+A+K Sbjct: 197 IFLIFALGFVAIVVPLGILTTWSSRKLAVKR 227 >gi|330427592|gb|AEC18926.1| polar amino acid ABC transporter, inner membrane subunit [Pusillimonas sp. T7-7] Length = 223 Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 47/132 (35%), Positives = 78/132 (59%), Gaps = 11/132 (8%) Query: 274 SCYTAAFIA----------EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 S YTAA +A EIVR+G+ ++P+GQ+EA +AL L+ + R V+L A+++I Sbjct: 88 SPYTAALVAMVFNLGAYATEIVRAGIESIPKGQIEAGLALNLSRLEVFRFVVLKPALKAI 147 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 P LTSQ++ L+ SS+ + DL SV + ++T ++ EI ++ IYL L++ Sbjct: 148 YPALTSQFILLMLASSVVSVISADDLTSVAANLQSETFRSFEIYIVVTGIYLLLTLAFT- 206 Query: 384 FMNRLNAKIALK 395 F+ RL + +L Sbjct: 207 FVFRLAYQWSLN 218 >gi|294083877|ref|YP_003550634.1| polar amino acid ABC transporter inner membrane subunit [Candidatus Puniceispirillum marinum IMCC1322] gi|292663449|gb|ADE38550.1| polar amino acid ABC transporter, inner membrane subunit [Candidatus Puniceispirillum marinum IMCC1322] Length = 225 Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 47/140 (33%), Positives = 78/140 (55%), Gaps = 3/140 (2%) Query: 254 FNF--IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311 +NF I G +SP FM+ I L YTAA +A++ RSG+ A P AA +LG+T+ + Sbjct: 83 YNFFPIIGLPLSP-FMAGTIVLIVYTAALVAQVARSGVEATPLPMRRAARSLGMTYFQDI 141 Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371 R V+ P +R+++P T L +LK+S+L +G+ +L+ ++ +T + I+ + Sbjct: 142 RYVVFPIGLRAVLPAWTGVALGVLKDSALVSVLGYVELLRASQILVTRTQEPFIILAVVG 201 Query: 372 FIYLSLSIMIALFMNRLNAK 391 Y LS IA +RL + Sbjct: 202 GFYFMLSYPIARITDRLEKR 221 >gi|206563412|ref|YP_002234175.1| ABC transporter ATP-binding membrane protein [Burkholderia cenocepacia J2315] gi|198039452|emb|CAR55419.1| ABC transporter ATP-binding membrane protein [Burkholderia cenocepacia J2315] Length = 599 Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 45/137 (32%), Positives = 79/137 (57%), Gaps = 4/137 (2%) Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321 +SP F++ + L+ AAF AE++R G++AV +GQ+EAA ALGL + T ++LPQAMR Sbjct: 163 ISP-FLAAVLGLTLNHAAFSAEVIRGGILAVDQGQLEAAAALGLPRGRQTSRIVLPQAMR 221 Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL---IWMFIYLSLS 378 +I+P + + L K +S+ + +L I + + I +++ +W I L++ Sbjct: 222 AILPTAFNDLITLAKGTSMVYVLAMPELFYTVQVIYRRNLEVIPLLMVATVWYLIILTVL 281 Query: 379 IMIALFMNRLNAKIALK 395 I + + R A+ AL+ Sbjct: 282 SAIQVQVERHYARGALR 298 >gi|49480129|ref|YP_035105.1| amino acid ABC transporter permease [Bacillus thuringiensis serovar konkukian str. 97-27] gi|49331685|gb|AAT62331.1| amino acid ABC transporter, permease [Bacillus thuringiensis serovar konkukian str. 97-27] Length = 226 Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 47/157 (29%), Positives = 92/157 (58%), Gaps = 14/157 (8%) Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244 T + + +F++G++L+ T L+R + + + +Y+S +I G P LV + + + Sbjct: 27 TTIPLTLITFIIGLILATL-TALARISGSRILQWIARIYVS--IIRGTPLLVQL---FII 80 Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304 + P L V P + + + S A+ +EI+R+ ++++P+GQ EAA +G Sbjct: 81 FYGLPTLN-------VEVEP-YTAAVVGFSLNVGAYASEIIRASILSIPKGQWEAAYTIG 132 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341 +T+ +A + V+LPQA R IPPL++ +++L+K++SLA Sbjct: 133 MTYPQALKRVILPQATRVSIPPLSNTFISLVKDTSLA 169 Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust. Identities = 15/41 (36%), Positives = 26/41 (63%) Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 I+ TL R+S ++++ WI R+YV + R P LV +F ++ Sbjct: 41 ILATLTALARISGSRILQWIARIYVSIIRGTPLLVQLFIIF 81 >gi|312865871|ref|ZP_07726092.1| ABC transporter, permease protein [Streptococcus downei F0415] gi|311098275|gb|EFQ56498.1| ABC transporter, permease protein [Streptococcus downei F0415] Length = 230 Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 38/122 (31%), Positives = 73/122 (59%), Gaps = 2/122 (1%) Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 AA ++E+ ++ +AVP+GQMEA +++GLT + R +LLPQ + +P + + LNL+K+ Sbjct: 109 AASVSEVFKAAYLAVPKGQMEAGLSIGLTGYQTFRRILLPQIFKIALPNIITAILNLMKD 168 Query: 338 SSLAVAVGFADLVSVGGTII--NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395 ++LA +G D++ G +I N ++E FIY L++++++ + L + L+ Sbjct: 169 AALAYTIGLVDVMGAGNLLISRNLGNYSLETYTAVAFIYWGLALILSVASHLLEHHLDLE 228 Query: 396 EK 397 Sbjct: 229 NS 230 >gi|311111176|ref|ZP_07712573.1| amino acid ABC transporter, permease protein [Lactobacillus gasseri MV-22] gi|311066330|gb|EFQ46670.1| amino acid ABC transporter, permease protein [Lactobacillus gasseri MV-22] Length = 217 Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 59/192 (30%), Positives = 100/192 (52%), Gaps = 17/192 (8%) Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV-LIALKYQLHF 246 +IF ++ V+ I L L H + K KA+ Y+ ++I G P L+ LI + Y L Sbjct: 24 EIFFWTTVVSIPLGLLVA-FGLHSNLKLVKAILKFYV--WIIRGTPLLLQLIFIFYGL-- 78 Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306 P +G V P + + +A AA+ AEI R GL AVP GQ EAA LGL+ Sbjct: 79 --PTVG--------IVFPRYEAALVAFIINYAAYFAEIFRGGLQAVPVGQFEAAQVLGLS 128 Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 + ++ PQ ++ ++P + ++ +NL+K+SSL +G DL+ G + + + Sbjct: 129 RWQTINRIVRPQVVKIVLPSIGNELINLVKDSSLVYVIGLGDLLRAGNVATARDVSLVPL 188 Query: 367 ILIWMFIYLSLS 378 +L+ +YL+++ Sbjct: 189 VLV-GCVYLAMT 199 >gi|307131247|ref|YP_003883263.1| ABC transporter permease [Dickeya dadantii 3937] gi|306528776|gb|ADM98706.1| ABC transporter permease protein [Dickeya dadantii 3937] Length = 228 Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 54/154 (35%), Positives = 87/154 (56%), Gaps = 21/154 (13%) Query: 234 TLVLIALKYQLHFDKPVLG--QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291 T VLI L + ++ PVL QF+ G +T +AL+ YTAA+ EI R+GL + Sbjct: 71 TPVLIQLIW-FYYALPVLLGIQFSTFGAAT---------LALTLYTAAYSTEIFRAGLQS 120 Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 + +GQ E A ALG+++ A R V+LPQ ++ ++P LT++ + L K +SLA + +L+ Sbjct: 121 MEQGQWEGAKALGMSYPLALRRVILPQVLQRMLPALTNRLIELAKVTSLASMLAVNELMY 180 Query: 352 VGGTIINQTGQAIEI---------ILIWMFIYLS 376 G + + T + +EI +LIW YL+ Sbjct: 181 QGRLLSSDTYRPLEILTVVALFYFVLIWPGSYLA 214 >gi|319761714|ref|YP_004125651.1| polar amino acid abc transporter, inner membrane subunit [Alicycliphilus denitrificans BC] gi|317116275|gb|ADU98763.1| polar amino acid ABC transporter, inner membrane subunit [Alicycliphilus denitrificans BC] Length = 248 Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 60/210 (28%), Positives = 109/210 (51%), Gaps = 24/210 (11%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL--H-FD 247 V +F LG+VL+L RLS F + A ++Y+ + G+P ++ I Y + H Sbjct: 40 VLAFPLGVVLAL--CRLS-PFRFLSWPATAIVYV----VRGVPLIMFIFWTYFIVPHILG 92 Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307 +PV G ++ + L Y +A++AEIVR+G+ +P GQ EAA A+GL++ Sbjct: 93 RPVAG-------------ITTMLVTLVIYQSAYLAEIVRAGMQGLPFGQTEAARAIGLSY 139 Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI-INQTGQAIEI 366 + T VLLPQA+ +++P + SQ+++ +K+++L + +L I N ++ Sbjct: 140 MQTTFKVLLPQAIYNMVPAIISQFVSSIKDTALGYVISVNELTFAASQINANLLTMPFQV 199 Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 ++ IY + ++ L +IAL+ Sbjct: 200 YILLASIYFVICALLTQLARYLERRIALRR 229 >gi|13474335|ref|NP_105903.1| ABC transporter, permease protein [Mesorhizobium loti MAFF303099] gi|14025088|dbj|BAB51689.1| ABC transporter, permease protein [Mesorhizobium loti MAFF303099] Length = 230 Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 43/147 (29%), Positives = 80/147 (54%), Gaps = 4/147 (2%) Query: 253 QFNFIGGSTVSPEFMSLY----IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308 Q+ +I S + P + +AL+ A + E++R VP+GQ+EAA A G++ Sbjct: 82 QYPWIRESWMWPYLRQAWPYGVLALTLSFAGYEGEVMRGAFAGVPQGQLEAARAFGMSRW 141 Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368 K + +LLPQA +P LT + + LK++ L + D+ +V G + T E +L Sbjct: 142 KIFQRILLPQAFYRALPTLTGETVLQLKSTPLVATISVIDIFAVAGKVRQDTYLTYEPLL 201 Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALK 395 + IY++++ ++ L ++R+ A+I +K Sbjct: 202 LLALIYMAITGILVLALSRIEARIPVK 228 >gi|312897773|ref|ZP_07757189.1| ABC transporter, permease protein [Megasphaera micronuciformis F0359] gi|310621157|gb|EFQ04701.1| ABC transporter, permease protein [Megasphaera micronuciformis F0359] Length = 216 Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 38/126 (30%), Positives = 71/126 (56%), Gaps = 1/126 (0%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IA AA+ AEI R G+ ++ RGQ E A LG+T+ + R ++LPQ ++ ++PP+ ++ Sbjct: 91 IAFVLNYAAYFAEIFRGGIQSIDRGQYEGAKVLGMTYAQTMRRIVLPQVLKRVLPPVANE 150 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 +NLLK++SL + D++ + +I+ + I+ +F YL + ++ F L Sbjct: 151 TINLLKDTSLVYILAMNDVLRITRSIVQRDFDTTAFIVAAVF-YLVFTFILTRFFMYLEK 209 Query: 391 KIALKE 396 + + E Sbjct: 210 RFNVYE 215 >gi|198242194|ref|YP_002215134.1| His/Glu/Gln/Arg/opine family amino acid ABC transporter permease [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|197936710|gb|ACH74043.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|326622883|gb|EGE29228.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Salmonella enterica subsp. enterica serovar Dublin str. 3246] Length = 222 Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 58/208 (27%), Positives = 107/208 (51%), Gaps = 20/208 (9%) Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251 F +LG VL+L R+S + + L YIS F G P LIA + +++ P Sbjct: 32 FGLLLGFVLALM--RMSPLWPVRW---LARFYISIFR--GTP---LIAQLFMIYYGLPQF 81 Query: 252 G-QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 G + + I + I LS TAA+ +E +R+ + A+ +GQ EAA ++G+T + Sbjct: 82 GIELDPIPAAM---------IGLSLNTAAYTSETLRAAISAIDKGQWEAAASIGMTPWQT 132 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370 R +LPQA +PPL++ +++L+K++SLA + +L I ++T + + L Sbjct: 133 LRRAILPQAAHVALPPLSNSFISLVKDTSLAATIQVPELFRQAQLITSRTLEVFTMYLAA 192 Query: 371 MFIYLSLSIMIALFMNRLNAKIALKEKK 398 IY ++ +++ N ++ +E++ Sbjct: 193 SLIYWVMATVLSALQNYFENQLNRQERE 220 Score = 37.7 bits (86), Expect = 3.6, Method: Compositional matrix adjust. Identities = 29/103 (28%), Positives = 48/103 (46%), Gaps = 8/103 (7%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G V T L+ GM ++G ++ R+S V W+ R Y+ +FR P + +F + Sbjct: 15 LLKGAVFTLQLSIGGMFFGLLLGFVLALMRMSPLWPVRWLARFYISIFRGTPLIAQLFMI 74 Query: 149 YKSV----LSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187 Y + + + PIP I G+ LN + TL +A Sbjct: 75 YYGLPQFGIELDPIPAAMI----GLSLNTAAYTSETLRAAISA 113 >gi|161502926|ref|YP_001570038.1| hypothetical protein SARI_00985 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160864273|gb|ABX20896.1| hypothetical protein SARI_00985 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 222 Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 58/208 (27%), Positives = 107/208 (51%), Gaps = 20/208 (9%) Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251 F +LG VL+L R+S + + L YIS F G P LIA + +++ P Sbjct: 32 FGLLLGFVLALM--RMSPLWPVRW---LARFYISIFR--GTP---LIAQLFMIYYGLPQF 81 Query: 252 G-QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 G + + I + I LS TAA+ +E +R+ + A+ +GQ EAA ++G+T + Sbjct: 82 GIELDPIPAAM---------IGLSLNTAAYTSETLRAAISAIDKGQWEAAASIGMTPWQT 132 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370 +LPQA R +PPL++ +++L+K++SLA + +L I ++T + + L Sbjct: 133 LHRAILPQAARVALPPLSNSFISLVKDTSLAATIQVPELFRQAQLITSRTLEVFTMYLAA 192 Query: 371 MFIYLSLSIMIALFMNRLNAKIALKEKK 398 IY ++ +++ N ++ +E++ Sbjct: 193 SLIYWVMATVLSALQNYFENQLNRQERE 220 Score = 37.7 bits (86), Expect = 3.6, Method: Compositional matrix adjust. Identities = 29/103 (28%), Positives = 48/103 (46%), Gaps = 8/103 (7%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G V T L+ GM ++G ++ R+S V W+ R Y+ +FR P + +F + Sbjct: 15 LLKGAVFTLQLSIGGMFFGLLLGFVLALMRMSPLWPVRWLARFYISIFRGTPLIAQLFMI 74 Query: 149 YKSV----LSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187 Y + + + PIP I G+ LN + TL +A Sbjct: 75 YYGLPQFGIELDPIPAAMI----GLSLNTAAYTSETLRAAISA 113 >gi|44004547|ref|NP_982216.1| amino acid ABC transporter, permease protein [Bacillus cereus ATCC 10987] gi|218848267|ref|YP_002455140.1| amino acid ABC transporter, permease protein [Bacillus cereus AH820] gi|229113501|ref|ZP_04242950.1| Amino acid ABC transporter, permease protein [Bacillus cereus Rock1-15] gi|229164678|ref|ZP_04292542.1| Amino acid ABC transporter, permease protein [Bacillus cereus R309803] gi|296506620|ref|YP_003667854.1| amino acid ABC transporter permease protein [Bacillus thuringiensis BMB171] gi|42741613|gb|AAS45058.1| amino acid ABC transporter, permease protein [Bacillus cereus ATCC 10987] gi|218540318|gb|ACK92714.1| amino acid ABC transporter, permease protein [Bacillus cereus AH820] gi|228618758|gb|EEK75720.1| Amino acid ABC transporter, permease protein [Bacillus cereus R309803] gi|228669919|gb|EEL25313.1| Amino acid ABC transporter, permease protein [Bacillus cereus Rock1-15] gi|296327207|gb|ADH10134.1| amino acid ABC transporter, permease protein [Bacillus thuringiensis BMB171] Length = 219 Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 51/175 (29%), Positives = 88/175 (50%), Gaps = 20/175 (11%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 + PLL F+ FGLP L PV+G++ V F++ + Sbjct: 61 RGTPLLLQLLFICFGLPLL-------------PVIGEY------LVMDRFVAACLGFILN 101 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 AA+ AEI R GL+A+ +GQ EA+ LGL+ + R V+LPQ R +P + ++ + L+K Sbjct: 102 YAAYFAEIFRGGLLAIDKGQYEASQVLGLSKWQTMRRVILPQMFRIALPAVANESVTLIK 161 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 +++L AV +L+ T +N+ I + IYL +++++ +F L + Sbjct: 162 DTALLYAVAVPELLHFAQTAVNRDF-TITPFFVAGLIYLIMTLVLTMFFKWLERR 215 >gi|327441796|dbj|BAK18161.1| ABC-type amino acid transport system, permease component [Solibacillus silvestris StLB046] Length = 227 Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 50/174 (28%), Positives = 86/174 (49%), Gaps = 20/174 (11%) Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL------YIALSCYTAAFIAEI 284 G+PTL+ I + Y G + P F SL ALS AA+++E+ Sbjct: 64 GVPTLIQIFIFY--------------FGIPQLFPSFSSLDAITAVIFALSVKNAAYLSEV 109 Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344 RS +AV +GQ EA A+ +T + R V+LPQ +R IP + Y+ ++K +SLA + Sbjct: 110 FRSAFLAVDKGQFEACDAMNMTKWQGLRTVILPQVLRVAIPASGNYYIMMIKETSLAFTI 169 Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 G D+++ T + +E L IY ++++++A ++L + +K Sbjct: 170 GVVDMLARAKLESAVTYKFLEAYLTVGLIYWTITVILAFLQSKLENYVERPYQK 223 >gi|320325829|gb|EFW81890.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. glycinea str. B076] gi|320327253|gb|EFW83267.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. glycinea str. race 4] Length = 365 Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 32/81 (39%), Positives = 58/81 (71%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I + + +A+IAE+VR G+ A+P+GQ EAA A+ L + ++ LV+LPQA++ +IP + + Sbjct: 235 IGVILFQSAYIAEVVRGGMQAIPKGQYEAASAMDLGYWRSMGLVILPQALKMVIPGIVNT 294 Query: 331 YLNLLKNSSLAVAVGFADLVS 351 ++ L K++SL + +G DL++ Sbjct: 295 FIALFKDTSLVIIIGLFDLLN 315 >gi|229591696|ref|YP_002873815.1| putative ABC transporter ATP-binding protein [Pseudomonas fluorescens SBW25] gi|229363562|emb|CAY50838.1| putative ABC transport system, ATP-binding protein [Pseudomonas fluorescens SBW25] Length = 505 Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 53/164 (32%), Positives = 85/164 (51%), Gaps = 9/164 (5%) Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV-SPEFMSLYIALSCYTAAFIAEIV 285 +L LP LVL+ Y L P G S V + F S +AL A++AEI Sbjct: 62 WLFRSLPLLVLLIFIYNLPQALP--------GTSAVLADPFWSGLLALVICETAYVAEIH 113 Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345 R GL+++P+GQ EAA ALGL V++PQA+R +P L ++Y++++K +SL + Sbjct: 114 RGGLLSIPKGQGEAARALGLKFFGTQWRVVIPQALRVALPSLANEYISIVKLTSLVSVIS 173 Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 +++ VG + +Q IE + F Y+ + + + RL Sbjct: 174 LTEILMVGQRLYSQNFLVIETMAAVAFFYVFIVTVFDFLLKRLE 217 >gi|218458510|ref|ZP_03498601.1| amino acid ABC transporter permease [Rhizobium etli Kim 5] Length = 229 Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 41/119 (34%), Positives = 68/119 (57%) Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 AA+ AE++R L+AVP+G++EA A GL+ K TR + LP+A+R +P + + + LK Sbjct: 111 AAYEAEVLRGALLAVPKGELEAGRAFGLSPWKLTRRIWLPRAIRIALPTIAGEIVMQLKA 170 Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 + LA V DL +V + T E +L+ YL+L+ +IA L A++ ++ Sbjct: 171 TPLAFTVTVMDLYAVANKVRQDTLLVYEPLLVVTLFYLALTAVIARVFRGLEAQVPVRR 229 >gi|148252818|ref|YP_001237403.1| amino acid ABC transporter membrane protein [Bradyrhizobium sp. BTAi1] gi|146404991|gb|ABQ33497.1| amino acid ABC transporter membrane protein, PAAT family [Bradyrhizobium sp. BTAi1] Length = 219 Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 44/135 (32%), Positives = 76/135 (56%), Gaps = 1/135 (0%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G +SP ++ +I+LS Y AF +EI+R G++++ GQ +A ALG+ R +++PQ Sbjct: 85 GVELSPA-VAAFISLSLYGGAFYSEIIRGGIVSIDPGQWDAGRALGMRRFDLMRRIVMPQ 143 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378 A++ +IPPL +Q + LKN+SL + DL+ G I + T + +E + IY + Sbjct: 144 ALKRMIPPLVNQAVLQLKNTSLLSVLAVPDLLYQGQLITSATYRPLETYTMIAVIYFIIL 203 Query: 379 IMIALFMNRLNAKIA 393 + L A++A Sbjct: 204 FPMTRVARVLEARLA 218 >gi|262402084|ref|ZP_06078648.1| amino acid ABC transproter permease protein [Vibrio sp. RC586] gi|262351730|gb|EEZ00862.1| amino acid ABC transproter permease protein [Vibrio sp. RC586] Length = 223 Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 54/171 (31%), Positives = 95/171 (55%), Gaps = 17/171 (9%) Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV-LIAL 240 T++ + VF+ +L ++L+ R F L LYIS F G P LV L L Sbjct: 22 TLEMASWGLVFALILALILANI-----RVFKVPVLDPLSQLYISFFR--GTPLLVQLFLL 74 Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300 Y L P+L + F + I L+ + AA++AE +R+ +I + R QMEA+ Sbjct: 75 YYGLPQVFPLLVGLD---------AFSAAVIGLTLHFAAYMAESIRAAIIGIDRSQMEAS 125 Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 +++G+T +A R ++LPQA R +P L + +++++K++SLA +G A++++ Sbjct: 126 LSVGMTTSQAMRRIILPQATRVALPSLMNYFIDMIKSTSLAFTLGVAEIMA 176 >gi|255526252|ref|ZP_05393169.1| polar amino acid ABC transporter, inner membrane subunit [Clostridium carboxidivorans P7] gi|296186246|ref|ZP_06854650.1| ABC transporter, permease protein [Clostridium carboxidivorans P7] gi|255510032|gb|EET86355.1| polar amino acid ABC transporter, inner membrane subunit [Clostridium carboxidivorans P7] gi|296049047|gb|EFG88477.1| ABC transporter, permease protein [Clostridium carboxidivorans P7] Length = 223 Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 52/135 (38%), Positives = 78/135 (57%), Gaps = 14/135 (10%) Query: 220 PLL--YISTFLIFGLPTLV-LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 PLL YIS F G P LV L L Y L P+L N + + I LS Sbjct: 55 PLLKVYISFFR--GTPLLVQLFLLYYGLPQIIPILKNIN---------AYTAAIIGLSMN 103 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 ++A++ EI+R + +V +GQMEA ALG+T + + ++LPQA R IP L + +++LLK Sbjct: 104 SSAYMVEILRGAIGSVDKGQMEAVKALGMTSWQGMKRIVLPQAARVAIPALGNTFVDLLK 163 Query: 337 NSSLAVAVGFADLVS 351 +SSLA +G A++++ Sbjct: 164 SSSLAFTLGVAEILA 178 >gi|304407618|ref|ZP_07389270.1| polar amino acid ABC transporter, inner membrane subunit [Paenibacillus curdlanolyticus YK9] gi|304343569|gb|EFM09411.1| polar amino acid ABC transporter, inner membrane subunit [Paenibacillus curdlanolyticus YK9] Length = 236 Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 44/129 (34%), Positives = 74/129 (57%), Gaps = 7/129 (5%) Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329 YIA S A+++E+VRSGL+AV +GQ+EAA A+G+T +A R ++ PQA ++P L++ Sbjct: 105 YIAFSITAGAYLSEVVRSGLLAVDKGQIEAAYAVGMTTTQAIRRIVFPQAFAILLPNLSN 164 Query: 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 +++L S+LA V D+ + I + + E + IY L+ +I R+ Sbjct: 165 GTISMLHGSTLAFTVSVVDINAKSQIIASSNWKFFESYIAAAVIYWGLTFLI----ERMT 220 Query: 390 AKIALKEKK 398 A+ EK+ Sbjct: 221 ---AMAEKR 226 >gi|297571711|ref|YP_003697485.1| polar amino acid ABC transporter inner membrane protein [Arcanobacterium haemolyticum DSM 20595] gi|296932058|gb|ADH92866.1| polar amino acid ABC transporter, inner membrane subunit [Arcanobacterium haemolyticum DSM 20595] Length = 222 Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 40/103 (38%), Positives = 62/103 (60%) Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 L+ A+ AE +RSGL AVPRGQ EA +L +THR+ ++ PQA R IPPL+S ++ Sbjct: 96 LALNAGAYTAEALRSGLKAVPRGQWEAGQSLNMTHRQILWSIVAPQAFRIAIPPLSSDFI 155 Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375 +L+K +SL ++ D+ G + T + + + + FIYL Sbjct: 156 DLVKGTSLVSSITLVDVFLRGQQLAAVTFEPLLLYVEVAFIYL 198 >gi|218198736|gb|EEC81163.1| hypothetical protein OsI_24129 [Oryza sativa Indica Group] Length = 180 Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 36/96 (37%), Positives = 60/96 (62%) Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315 F+ T + + + + + +A++AE+VR GL A+P+GQ EAA +L L + K LV+ Sbjct: 34 FMAEGTTIDKLIRALVGVILFQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQGLVI 93 Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 LPQA++ +IP L + + L K++SL + +G DL S Sbjct: 94 LPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFS 129 >gi|52144470|ref|YP_082358.1| amino acid ABC transporter, permease [Bacillus cereus E33L] gi|301052511|ref|YP_003790722.1| amino acid ABC transporter permease [Bacillus anthracis CI] gi|51977939|gb|AAU19489.1| amino acid ABC transporter, permease [Bacillus cereus E33L] gi|300374680|gb|ADK03584.1| amino acid ABC transporter, permease [Bacillus cereus biovar anthracis str. CI] Length = 232 Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 47/157 (29%), Positives = 92/157 (58%), Gaps = 14/157 (8%) Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244 T + + +F++G++L+ T L+R + + + +Y+S +I G P LV + + + Sbjct: 33 TTIPLTLITFIIGLILATL-TALARISGSRILQWIARIYVS--IIRGTPLLVQL---FII 86 Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304 + P L V P + + + S A+ +EI+R+ ++++P+GQ EAA +G Sbjct: 87 FYGLPTLN-------VEVEP-YTAAVVGFSLNVGAYASEIIRASILSIPKGQWEAAYTIG 138 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341 +T+ +A + V+LPQA R IPPL++ +++L+K++SLA Sbjct: 139 MTYPQALKRVILPQATRVSIPPLSNTFISLVKDTSLA 175 Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust. Identities = 15/41 (36%), Positives = 26/41 (63%) Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 I+ TL R+S ++++ WI R+YV + R P LV +F ++ Sbjct: 47 ILATLTALARISGSRILQWIARIYVSIIRGTPLLVQLFIIF 87 >gi|310641777|ref|YP_003946535.1| sulfur-containing amino acid abc transporter, permease protein tcyl [Paenibacillus polymyxa SC2] gi|309246727|gb|ADO56294.1| Sulfur-containing amino acid ABC transporter, permease protein TcyL [Paenibacillus polymyxa SC2] Length = 259 Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 41/133 (30%), Positives = 77/133 (57%), Gaps = 3/133 (2%) Query: 269 LYIALSCY---TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 L+ A++ Y + AFI+EI+RSG+ AV RGQ+EAA ++G++ + ++LPQA+ ++P Sbjct: 97 LWFAVATYALNSGAFISEIIRSGVGAVDRGQIEAAQSVGMSGYQTFTRIILPQALAVVVP 156 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 ++ + LK++SLA +G ++ T+ + T +E + FIYL +S+++ Sbjct: 157 VFSNLVIGNLKDTSLAFTIGAMEMTGKSQTLGSATQHFVETYIALSFIYLVISLIVQKLF 216 Query: 386 NRLNAKIALKEKK 398 L + E + Sbjct: 217 KVLENTLLRHEHR 229 >gi|290968268|ref|ZP_06559811.1| ABC transporter, permease protein [Megasphaera genomosp. type_1 str. 28L] gi|290781750|gb|EFD94335.1| ABC transporter, permease protein [Megasphaera genomosp. type_1 str. 28L] Length = 216 Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 33/96 (34%), Positives = 60/96 (62%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P F + IA AA+ AEI R G+ ++ RGQ E A LG+T+ + R ++LPQ ++ + Sbjct: 84 PPFGAAIIAFVLNYAAYFAEIFRGGIQSIGRGQYEGAKVLGMTYGQTMRRIVLPQVVKCV 143 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359 +PP+ ++ +NLLK++SL + D++ + +I+ + Sbjct: 144 LPPVANETINLLKDTSLVYILAMNDILRITRSIVQR 179 >gi|255326957|ref|ZP_05368033.1| glutamate transporter permease protein GluD [Rothia mucilaginosa ATCC 25296] gi|255296174|gb|EET75515.1| glutamate transporter permease protein GluD [Rothia mucilaginosa ATCC 25296] Length = 312 Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 35/130 (26%), Positives = 81/130 (62%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+++ I L+ Y + IAE++RSG+ +PRGQ EA +A+GLT + +LLPQA +++P Sbjct: 151 FIAVVIGLTLYNGSVIAELLRSGVKQLPRGQGEAGLAIGLTPTQTLIRILLPQAFTAMMP 210 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 + SQ++ +LK+++L + + +L++ I + G ++ +++ ++++++ ++ Sbjct: 211 SMLSQFVVILKDTALGYIISYPELLASARRIGSGDGNVLQTLILAAALFVTVNFVLTAVA 270 Query: 386 NRLNAKIALK 395 + ++A + Sbjct: 271 TGITDRLASR 280 >gi|152986188|ref|YP_001349726.1| ectoine/hydroxyectoine ABC transporter permease EhuC [Pseudomonas aeruginosa PA7] gi|150961346|gb|ABR83371.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC [Pseudomonas aeruginosa PA7] Length = 222 Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 40/123 (32%), Positives = 70/123 (56%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + L + A+ AE++R + +VPRGQ EAA+AL +T R ++LPQA+ IPP T+ Sbjct: 91 LGLGLHIGAYGAEVMRGAIGSVPRGQYEAALALNMTPFTRFRRIVLPQALLCAIPPGTNL 150 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 + LLKN+SL + +DL + T + ++I + + +Y +++ +I M RL Sbjct: 151 LIELLKNTSLVSLITLSDLAFRARQLDQATFETLKIFSLTLVLYFAMAQVIVFLMRRLER 210 Query: 391 KIA 393 ++ Sbjct: 211 RLG 213 >gi|52144758|ref|YP_082070.1| amino acid ABC transporter, permease [Bacillus cereus E33L] gi|51978227|gb|AAU19777.1| amino acid ABC transporter, permease [Bacillus cereus E33L] Length = 217 Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 37/120 (30%), Positives = 69/120 (57%) Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 ALS + I EIVR L ++P+GQ+EA ++GL + + VL+PQA+R +IP + + Sbjct: 96 ALSLWGITEIGEIVRGALQSLPKGQVEAGKSIGLNKNQLYQYVLIPQAIRRMIPATINIF 155 Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 + +++ +SL V +G +++ G I+ +TG+A I Y L ++++ +L + Sbjct: 156 IRIIQTTSLTVLIGVTEVIKAGQQIVERTGEAFLIYGCLFIFYFLLCYPLSIWSRKLETR 215 >gi|91786597|ref|YP_547549.1| amino acid ABC transporter permease [Polaromonas sp. JS666] gi|91695822|gb|ABE42651.1| amino acid ABC transporter membrane protein 2, PAAT family [Polaromonas sp. JS666] Length = 229 Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 43/123 (34%), Positives = 71/123 (57%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I++ AFIAEIVRSGL +V R Q +AA+ L ++ + RLV++PQA + I+PP+ Sbjct: 102 ISVCLIATAFIAEIVRSGLESVHRNQWDAAVTLNFSYLQTLRLVIVPQAWKVILPPVFGF 161 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++ +K+++LA +G +L G + N+ A + + +Y LS +A F L Sbjct: 162 FVLFIKDTALASQIGVVELAFAGKAMNNKGFSAALVYGTVLALYFMLSYPLAHFGKYLER 221 Query: 391 KIA 393 K+A Sbjct: 222 KLA 224 >gi|255066834|ref|ZP_05318689.1| L-cystine ABC transporter, permease protein [Neisseria sicca ATCC 29256] gi|255048909|gb|EET44373.1| L-cystine ABC transporter, permease protein [Neisseria sicca ATCC 29256] Length = 227 Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 32/90 (35%), Positives = 56/90 (62%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I S A+ +E +R+ +++VP+GQ EA ++G+T+ + R ++ PQA R +PPL+++ Sbjct: 100 IGFSLNVGAYASETIRAAILSVPKGQWEAGFSIGMTYMQTFRRIVAPQAFRVAVPPLSNE 159 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 ++ L KN+SLA V +L V N+T Sbjct: 160 FIGLFKNTSLAAVVTVTELFRVAQETANRT 189 >gi|257067440|ref|YP_003153695.1| amino acid ABC transporter membrane protein [Brachybacterium faecium DSM 4810] gi|256558258|gb|ACU84105.1| amino acid ABC transporter membrane protein [Brachybacterium faecium DSM 4810] Length = 369 Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 63/226 (27%), Positives = 118/226 (52%), Gaps = 20/226 (8%) Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALK 241 T+ A F LG+VL+L RLS K+ + + +++ P LV + L Sbjct: 126 TLRLTAAAGAIGFGLGLVLALM--RLS-----KSSLISGVSWTFSWVFRSTPLLVQLLLW 178 Query: 242 YQLHF--DKPVLGQFNFIGG-------STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292 Y L + ++ LG F G S + ++ + L + AA+ AE++R G+++V Sbjct: 179 YNLGYLYEQVSLG-IPFTGATFFEARTSDLMTPMLAAILGLGLHQAAYAAELIRGGILSV 237 Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352 +GQ+EAA ALG+ R + ++LPQAMR+I+PP ++ + L+K +S+ + A+L Sbjct: 238 DQGQLEAASALGIPARDRSLRIVLPQAMRAILPPAFNEIIGLVKGTSIVYVLAHAELFFT 297 Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIAL---FMNRLNAKIALK 395 I +T Q + ++L+ Y+ ++ +++ ++ R +K AL+ Sbjct: 298 VQLIYGRTQQVLPMLLVATLWYVVITSALSVGQYYIERHFSKGALR 343 >gi|55378502|ref|YP_136352.1| amino acid ABC transporter permease protein [Haloarcula marismortui ATCC 43049] gi|55231227|gb|AAV46646.1| amino acid ABC transporter permease protein [Haloarcula marismortui ATCC 43049] Length = 326 Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 64/207 (30%), Positives = 109/207 (52%), Gaps = 12/207 (5%) Query: 195 VLGIVLSLF-ATRLS--RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP-- 249 +LGI L F A LS R + ++L L Y T L G P L+A + L+F P Sbjct: 117 LLGIALGFFIAVPLSVARVYGGTLTRSLALGY--TELFRGTP---LLAQLFVLYFATPLT 171 Query: 250 -VLGQFNFIGGSTVSPE-FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307 ++ + +G + + F IA + +AA+ +E +RS L +VP GQ+ AA ++GL+ Sbjct: 172 TIIRELPTVGAGFIPAQAFWVAVIAFTLNSAAYQSEYIRSALNSVPEGQLTAARSIGLSK 231 Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367 R V+LPQ +R IP +++ + L+K SSLA + +L I ++T + E+ Sbjct: 232 VDGIRHVVLPQGLRYAIPGWSNELVYLIKYSSLASFITVRELFERTDAIASETYRYTELF 291 Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIAL 394 ++ +YL+L I +L M + ++A+ Sbjct: 292 VLAGLLYLALVISASLVMEYVEDRVAI 318 >gi|83747887|ref|ZP_00944919.1| Hypothetical Protein RRSL_03143 [Ralstonia solanacearum UW551] gi|207739277|ref|YP_002257670.1| amino acid transmembrane protein [Ralstonia solanacearum IPO1609] gi|83725420|gb|EAP72566.1| Hypothetical Protein RRSL_03143 [Ralstonia solanacearum UW551] gi|206592650|emb|CAQ59556.1| amino acid transmembrane protein [Ralstonia solanacearum IPO1609] Length = 250 Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 44/139 (31%), Positives = 77/139 (55%), Gaps = 2/139 (1%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 GS VS F ++ L Y +++E+VR+G+ A+P+GQMEAA ALG ++ A RLV+LPQ Sbjct: 94 GSNVS-GFTTMVCTLVIYEGVYLSEVVRAGIEALPKGQMEAARALGHSYFGAMRLVILPQ 152 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ-TGQAIEIILIWMFIYLSL 377 A+ +++P + +Q+++ +K ++L + +L I N + +I + IY + Sbjct: 153 ALYNMLPSMLAQFVSTIKETTLGYVINVPELTFAANQINNALLSKPFQIFFMLAVIYFVV 212 Query: 378 SIMIALFMNRLNAKIALKE 396 + L +IA K Sbjct: 213 CWSLTRTARALEHRIAAKR 231 >gi|313498369|gb|ADR59735.1| Polar amino acid ABC transporter, inner membrane subunit [Pseudomonas putida BIRD-1] Length = 178 Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 43/136 (31%), Positives = 79/136 (58%), Gaps = 1/136 (0%) Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322 SP F++ I L+ T+A +AEI R L AVP+GQ EA LGL+ + V++PQ +R Sbjct: 44 SP-FVAAIIGLALITSANMAEIYRGALSAVPKGQYEATKVLGLSTWQKYVHVIVPQVVRI 102 Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382 +P ++ + LLK++++A +G ++L V I +T + + + I +Y ++S+ +A Sbjct: 103 SVPAASTYCIGLLKDTAIASTIGVSELAQVANHISQETFRGLSVYAIAGLLYFAVSVFMA 162 Query: 383 LFMNRLNAKIALKEKK 398 L +L+ + K ++ Sbjct: 163 LLSRQLDIHLRAKVER 178 >gi|293602702|ref|ZP_06685143.1| glutamate/aspartate ABC superfamily ATP binding cassette transporter, permease protein [Achromobacter piechaudii ATCC 43553] gi|292818893|gb|EFF77933.1| glutamate/aspartate ABC superfamily ATP binding cassette transporter, permease protein [Achromobacter piechaudii ATCC 43553] Length = 229 Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 51/192 (26%), Positives = 97/192 (50%), Gaps = 12/192 (6%) Query: 194 FVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP---------TLVLIALKYQL 244 F G+ +L T L+ G L ++ +S F I +P ++ L+ + + Sbjct: 17 FQTGMTFTLTLTALAAVMGLALGTLLAMMRLSRFKILSVPAGIYVNVMRSIPLLLVIFWF 76 Query: 245 HFDKPVLGQFNFIGGST--VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302 +F P + + +G T F S I + + AA+ EI+R+G+ ++ RGQ+ A++A Sbjct: 77 YFLVPYIAAW-VVGSPTPLRVGAFNSAVITFTMFEAAYFCEIMRAGIQSIARGQVSASMA 135 Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362 +GLT + R V+LPQA R+++P L ++ + L +++SL + D + I + G+ Sbjct: 136 IGLTPWQGMRYVVLPQAFRNMVPALLTRVIILFQDTSLVYVLSLTDFLGAASKIGQRDGR 195 Query: 363 AIEIILIWMFIY 374 +E+ L +Y Sbjct: 196 LVELYLFVAVVY 207 >gi|149191456|ref|ZP_01869706.1| arginine transporter permease subunit ArtQ [Vibrio shilonii AK1] gi|148834725|gb|EDL51712.1| arginine transporter permease subunit ArtQ [Vibrio shilonii AK1] Length = 230 Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 48/135 (35%), Positives = 76/135 (56%), Gaps = 1/135 (0%) Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321 VSP F++ IALS A++ A+ +R L AVP GQ EA ALGL+ + ++LPQA++ Sbjct: 87 VSP-FLAGVIALSLIFASYAAQTIRGALKAVPSGQREAGSALGLSRARVFFRIVLPQAVK 145 Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 +P LT+Q+L LLK+++L +G DL+ T +A IYL ++++ Sbjct: 146 HALPGLTNQWLVLLKDTALVSLIGVTDLMKQAQLTSAATHEAFTWYATAAAIYLIITLIT 205 Query: 382 ALFMNRLNAKIALKE 396 + L+ K + KE Sbjct: 206 QKAVKVLDKKFSSKE 220 >gi|118475005|ref|YP_892321.1| amino acid ABC transporter, permease protein PEB1 [Campylobacter fetus subsp. fetus 82-40] gi|118414231|gb|ABK82651.1| amino acid ABC transporter, permease protein PEB1 [Campylobacter fetus subsp. fetus 82-40] Length = 229 Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 30/80 (37%), Positives = 58/80 (72%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + + Y A+++E+VRSG+ ++P+GQ EAA + G ++ + ++LPQ+++ I+PP T+Q Sbjct: 100 LGIGAYHGAYMSEVVRSGINSIPKGQFEAATSQGFSYIEQMMYIILPQSIKIILPPATNQ 159 Query: 331 YLNLLKNSSLAVAVGFADLV 350 +NL+KNSS+ + + A+L+ Sbjct: 160 AVNLIKNSSVLLIIAGAELM 179 >gi|315289022|gb|EFU48420.1| ABC transporter, permease protein [Escherichia coli MS 110-3] Length = 347 Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 63/220 (28%), Positives = 107/220 (48%), Gaps = 28/220 (12%) Query: 132 YVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV 191 Y+ V+ I PLVV + +Y L + D + R TLT+ + Sbjct: 105 YIAVWAVIYPLVVWWLMYGGFLGL----DR---------VETRQWGGLTLTLIIASVGIA 151 Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251 + GI+L+L R H + L +++I + G+P LI + + P+ Sbjct: 152 GALPWGILLAL-----GRRSHMPIVRILSVIFIEFWR--GVP---LITVLFMSSVMLPL- 200 Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311 F+ T + + + + + +A++AE+VR GL A+P+GQ EAA +L L + K Sbjct: 201 ----FMAEGTSIDKLIRALVGVILFQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQ 256 Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 LV+LPQA++ +IP L + + L K++SL + +G DL S Sbjct: 257 GLVILPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFS 296 >gi|191639757|ref|YP_001988923.1| ArpJ protein [Lactobacillus casei BL23] gi|190714059|emb|CAQ68065.1| ArpJ protein [Lactobacillus casei BL23] gi|327383870|gb|AEA55346.1| Amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus casei LC2W] gi|327387051|gb|AEA58525.1| Amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus casei BD-II] Length = 482 Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 61/204 (29%), Positives = 107/204 (52%), Gaps = 26/204 (12%) Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251 F V+G +L+L +LS H KA+ +YI I G P LV + + F +L Sbjct: 299 FGTVIGTLLALM--KLS---HSWFAKAIANVYIE--FIRGTPLLVQ---AFIVFFGTQIL 348 Query: 252 GQ--FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309 G F+ G+ IA++ + A++AEI+R G+ +VP GQ EAA +LGL + Sbjct: 349 GLDLSAFVAGA----------IAMAINSGAYVAEIIRGGINSVPIGQTEAARSLGLHQGQ 398 Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA----IE 365 A R V+LPQA ++I P L ++++ +K SS+ +G +L+ G + + + + Sbjct: 399 AMRYVILPQATKNIWPALGNEFVTDIKESSVLSVIGATELMFEGTVVQGASFKPFLPLVV 458 Query: 366 IILIWMFIYLSLSIMIALFMNRLN 389 +++++ + +LS ++ L R N Sbjct: 459 VVILYFIMTFTLSRLLRLIEKRFN 482 >gi|170693259|ref|ZP_02884419.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia graminis C4D1M] gi|170141789|gb|EDT09957.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia graminis C4D1M] Length = 605 Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 45/144 (31%), Positives = 81/144 (56%), Gaps = 4/144 (2%) Query: 255 NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLV 314 N+ VSP F + + L+ + AAF AE++R G+ +V +GQ+EAA ALGL + R + Sbjct: 156 NWPTTEVVSP-FCAAVLGLTLHHAAFSAEVIRGGIQSVDQGQLEAAAALGLPRLRQARRI 214 Query: 315 LLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL---IWM 371 +LPQAMR+I+P + ++L K S++ + +L I + + I +++ +W Sbjct: 215 VLPQAMRAIVPTAFNDLISLAKGSAMVYVLAMPELFYTVQIIYRRNLEVIPLLMVATVWY 274 Query: 372 FIYLSLSIMIALFMNRLNAKIALK 395 I LS+ I +++ R ++ A + Sbjct: 275 LIILSVLSAIQVYVERYFSRGATR 298 >gi|89899771|ref|YP_522242.1| amino acid ABC transporter permease [Rhodoferax ferrireducens T118] gi|89344508|gb|ABD68711.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Rhodoferax ferrireducens T118] Length = 222 Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 56/180 (31%), Positives = 92/180 (51%), Gaps = 14/180 (7%) Query: 215 TGKALPLLYIS---TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYI 271 T A PL +++ T I G P LVL+ Y +LG G +SP F + + Sbjct: 49 TYGAKPLRWMTRAYTDFIRGTPVLVLVLASYY------ILGA----AGVQLSP-FQAGVL 97 Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 AL+ + ++ + EIVR L A+P GQ+EAA A+GLT + +LLPQA+R ++P + Sbjct: 98 ALAVFCSSHVGEIVRGALQAIPVGQIEAAKAIGLTFSQTFLYILLPQAIRQVLPTWVNTA 157 Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 ++K S+L +G DL+ +I++T ++ F+Y + + I F + K Sbjct: 158 AEMVKASTLLSIIGVGDLLLASQEVISRTFMSLPFYFFAGFLYFTANFAIEHFGRYVERK 217 >gi|16081000|ref|NP_391828.1| ABC transporter permease [Bacillus subtilis subsp. subtilis str. 168] gi|221311922|ref|ZP_03593769.1| hypothetical protein Bsubs1_21306 [Bacillus subtilis subsp. subtilis str. 168] gi|221316246|ref|ZP_03598051.1| hypothetical protein BsubsN3_21217 [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221321158|ref|ZP_03602452.1| hypothetical protein BsubsJ_21165 [Bacillus subtilis subsp. subtilis str. JH642] gi|221325442|ref|ZP_03606736.1| hypothetical protein BsubsS_21316 [Bacillus subtilis subsp. subtilis str. SMY] gi|1731314|sp|P54953|YXEN_BACSU RecName: Full=Probable amino-acid permease protein yxeN gi|1408499|dbj|BAA08330.1| yxeN [Bacillus subtilis] gi|2636495|emb|CAB15985.1| putative ABC transporter (permease) [Bacillus subtilis subsp. subtilis str. 168] Length = 224 Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 59/190 (31%), Positives = 100/190 (52%), Gaps = 15/190 (7%) Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256 G++L+L H+ L LYIS F G+PTLV + L +++ P L F Sbjct: 38 GLILALITKNKIPVLHQ-----LSKLYISFFR--GVPTLVQLFL---IYYGLPQL--FPE 85 Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316 + T + I LS AA++AEI R+ L +V GQ+EA +++G+T +A R ++L Sbjct: 86 MSKMTA---LTAAIIGLSLKNAAYLAEIFRAALNSVDDGQLEACLSVGMTKFQAYRRIIL 142 Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376 PQA+R+ IP + ++ LLK +SLA +G ++ + G + + E L +Y Sbjct: 143 PQAIRNAIPATGNTFIGLLKETSLAFTLGVMEMFAQGKMYASGNLKYFETYLAVAIVYWV 202 Query: 377 LSIMIALFMN 386 L+I+ ++ + Sbjct: 203 LTIIYSILQD 212 >gi|220904829|ref|YP_002480141.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219869128|gb|ACL49463.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 225 Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 38/104 (36%), Positives = 62/104 (59%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 +S +A + + AA+ +EI+R+G+ +V RGQ AA+ALG+T + V+LPQA R + Sbjct: 96 RLVSAMVAFTAFEAAYYSEIIRAGMNSVSRGQNYAALALGMTKSQTLIYVILPQAFRVMT 155 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368 P L +Q + L ++++L +G AD I TG IE++L Sbjct: 156 PLLLTQGVILFQDTALVYIIGLADFFRTATNIGKTTGYEIEMVL 199 Score = 36.2 bits (82), Expect = 8.7, Method: Compositional matrix adjust. Identities = 17/58 (29%), Positives = 32/58 (55%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 G + T + + +I ++GTL+ R+S + W+ YV FR+IP ++V+ + Y Sbjct: 19 GILVTLKITITSIILGMVLGTLLAVARISIYAPLRWLAAAYVNCFRSIPLVMVLLWFY 76 >gi|153011343|ref|YP_001372557.1| polar amino acid ABC transporter, inner membrane subunit [Ochrobactrum anthropi ATCC 49188] gi|151563231|gb|ABS16728.1| polar amino acid ABC transporter, inner membrane subunit [Ochrobactrum anthropi ATCC 49188] Length = 224 Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 60/179 (33%), Positives = 93/179 (51%), Gaps = 26/179 (14%) Query: 193 SFVLGI------VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246 +F++GI VLS + R + K + L + YI F +P LV++ L Y + Sbjct: 27 TFLIGIASIFFGVLSGLLISIVRIYGPKVLRYLAIAYIDVFR--AMPVLVVLILIY---Y 81 Query: 247 DKPVLG-QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305 P +G +F+ + S ++ S AA+ AE+ RSG+ +VPRGQ EAA ALG+ Sbjct: 82 ALPFIGIRFS---------AWTSAIMSFSMVMAAYSAEVFRSGIESVPRGQFEAASALGI 132 Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364 V+LPQA+R IIPP TS +++ K+++LA V +L+ Q QA+ Sbjct: 133 PFPVTLWKVVLPQAIRIIIPPTTSNCVSMFKDTALASTVALPELLKEA-----QDAQAL 186 >gi|261213265|ref|ZP_05927547.1| amino acid ABC transproter permease protein [Vibrio sp. RC341] gi|260837539|gb|EEX64242.1| amino acid ABC transproter permease protein [Vibrio sp. RC341] Length = 223 Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 54/171 (31%), Positives = 95/171 (55%), Gaps = 17/171 (9%) Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV-LIAL 240 T++ + VF+ +L ++L+ R F L LYIS F G P LV L L Sbjct: 22 TLEMASWGLVFALILALILANI-----RVFKVPVLDPLSQLYISFFR--GTPLLVQLFLL 74 Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300 Y L P+L + F + I L+ + AA++AE +R+ +I + R QMEA+ Sbjct: 75 YYGLPQIFPLLVGLD---------AFSAAVIGLTLHFAAYMAESIRAAIIGIDRSQMEAS 125 Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 +++G+T +A R ++LPQA R +P L + +++++K++SLA +G A++++ Sbjct: 126 LSVGMTTSQAMRRIILPQAARVALPSLMNYFIDMIKSTSLAFTLGVAEIMA 176 >gi|260429682|ref|ZP_05783658.1| ABC transporter, membrane spanning protein (amino acid) [Citreicella sp. SE45] gi|260419165|gb|EEX12419.1| ABC transporter, membrane spanning protein (amino acid) [Citreicella sp. SE45] Length = 231 Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 52/168 (30%), Positives = 86/168 (51%), Gaps = 13/168 (7%) Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLG-QFNFIGGSTVSPEFMSLYIALSCYTAAFI 281 Y T+LI G P LV + + Y P +G +F+ + + I L AA++ Sbjct: 59 YFYTWLIRGTPLLVQLIIIYT---GLPQIGIKFSVLEAT---------LIGLVMNEAAYL 106 Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341 +EI+RSG+ +VP+GQ AA A+G+T + R V+ PQA R IIPPL + LK +S+A Sbjct: 107 SEIIRSGISSVPKGQSNAARAVGMTDVQMMRYVIAPQAARIIIPPLGNSVNGCLKTTSIA 166 Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 + +L+ +I + +E+ ++ YL ++ L R+ Sbjct: 167 SIISMEELLRRTQVLIQEKFMVLELFVVAALYYLLMTTAWDLIQRRIE 214 >gi|302537323|ref|ZP_07289665.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces sp. C] gi|302446218|gb|EFL18034.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces sp. C] Length = 296 Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 45/141 (31%), Positives = 82/141 (58%), Gaps = 5/141 (3%) Query: 262 VSPEFMSLY---IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 VS +F +Y L Y A+ IAEIVR+G+ ++PRGQ +AA A+G+ + VL+PQ Sbjct: 134 VSSDFRPVYAVVTGLVLYNASVIAEIVRAGVQSLPRGQTDAAKAIGMRKGQTMVHVLIPQ 193 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVA-VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377 A+ +++P L SQ + +LK+++L + +G DL++ I I +++ IY+++ Sbjct: 194 AVTAMLPALVSQLVVILKDTALGGSLLGLTDLLAANRQISANYSNTIATLVVVALIYIAV 253 Query: 378 SIMIALFMNRLNAKIALKEKK 398 + + F + + ++ K KK Sbjct: 254 NFALTSFASWMEGRLR-KSKK 273 Score = 36.2 bits (82), Expect = 9.4, Method: Compositional matrix adjust. Identities = 28/95 (29%), Positives = 48/95 (50%), Gaps = 2/95 (2%) Query: 64 LSERAGFEIDQGIVPYTSDSS-YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN 122 + E+ + D+ P+ +D ++T ++ G + T M+ A +G L+G GRLS + Sbjct: 39 MGEKHQLDADK-WTPFVTDGRIWSTYLIPGLLETLKAGAIAMVIALPLGALLGMGRLSDH 97 Query: 123 KLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLP 157 V V VE FR IP L+++ F Y + +P Sbjct: 98 AWVRVPVGVVVEFFRAIPVLMLMMFGYAFFVRFIP 132 >gi|121597593|ref|YP_990724.1| glutamine ABC transporter permease protein [Burkholderia mallei SAVP1] gi|124382114|ref|YP_001025207.1| glutamine ABC transporter permease protein [Burkholderia mallei NCTC 10229] gi|126443854|ref|YP_001064262.1| glutamine ABC transporter permease [Burkholderia pseudomallei 668] gi|126445790|ref|YP_001079561.1| glutamine ABC transporter permease protein [Burkholderia mallei NCTC 10247] gi|126458223|ref|YP_001077186.1| glutamine ABC transporter permease [Burkholderia pseudomallei 1106a] gi|134281792|ref|ZP_01768499.1| glutamine ABC transporter, permease protein [Burkholderia pseudomallei 305] gi|166998959|ref|ZP_02264809.1| glutamine ABC transporter, permease protein [Burkholderia mallei PRL-20] gi|167744401|ref|ZP_02417175.1| glutamine ABC transporter permease protein [Burkholderia pseudomallei 14] gi|167821596|ref|ZP_02453276.1| glutamine ABC transporter permease protein [Burkholderia pseudomallei 91] gi|167829940|ref|ZP_02461411.1| glutamine ABC transporter permease protein [Burkholderia pseudomallei 9] gi|167851397|ref|ZP_02476905.1| glutamine ABC transporter permease protein [Burkholderia pseudomallei B7210] gi|167908342|ref|ZP_02495547.1| glutamine ABC transporter permease protein [Burkholderia pseudomallei NCTC 13177] gi|167916696|ref|ZP_02503787.1| glutamine ABC transporter permease protein [Burkholderia pseudomallei 112] gi|167924541|ref|ZP_02511632.1| glutamine ABC transporter permease protein [Burkholderia pseudomallei BCC215] gi|226199275|ref|ZP_03794835.1| glutamine ABC transporter, permease protein [Burkholderia pseudomallei Pakistan 9] gi|238563691|ref|ZP_00438452.2| glutamine ABC transporter, permease protein [Burkholderia mallei GB8 horse 4] gi|242313823|ref|ZP_04812840.1| glutamine ABC transporter, permease protein [Burkholderia pseudomallei 1106b] gi|254177202|ref|ZP_04883858.1| glutamine ABC transporter, permease protein [Burkholderia mallei ATCC 10399] gi|254182415|ref|ZP_04889009.1| glutamine ABC transporter, permease protein [Burkholderia pseudomallei 1655] gi|254192463|ref|ZP_04898902.1| glutamine ABC transporter, permease protein [Burkholderia pseudomallei S13] gi|254203623|ref|ZP_04909984.1| glutamine ABC transporter, permease protein [Burkholderia mallei FMH] gi|254205492|ref|ZP_04911845.1| glutamine ABC transporter, permease protein [Burkholderia mallei JHU] gi|254296638|ref|ZP_04964094.1| glutamine ABC transporter, permease protein [Burkholderia pseudomallei 406e] gi|121225391|gb|ABM48922.1| glutamine ABC transporter, permease protein [Burkholderia mallei SAVP1] gi|126223345|gb|ABN86850.1| glutamine ABC transporter, permease protein [Burkholderia pseudomallei 668] gi|126231991|gb|ABN95404.1| glutamine ABC transporter, permease protein [Burkholderia pseudomallei 1106a] gi|126238644|gb|ABO01756.1| glutamine ABC transporter, permease protein [Burkholderia mallei NCTC 10247] gi|134246854|gb|EBA46941.1| glutamine ABC transporter, permease protein [Burkholderia pseudomallei 305] gi|147745862|gb|EDK52941.1| glutamine ABC transporter, permease protein [Burkholderia mallei FMH] gi|147755078|gb|EDK62142.1| glutamine ABC transporter, permease protein [Burkholderia mallei JHU] gi|157806531|gb|EDO83701.1| glutamine ABC transporter, permease protein [Burkholderia pseudomallei 406e] gi|160698242|gb|EDP88212.1| glutamine ABC transporter, permease protein [Burkholderia mallei ATCC 10399] gi|169649221|gb|EDS81914.1| glutamine ABC transporter, permease protein [Burkholderia pseudomallei S13] gi|184212950|gb|EDU09993.1| glutamine ABC transporter, permease protein [Burkholderia pseudomallei 1655] gi|225928682|gb|EEH24709.1| glutamine ABC transporter, permease protein [Burkholderia pseudomallei Pakistan 9] gi|238520179|gb|EEP83641.1| glutamine ABC transporter, permease protein [Burkholderia mallei GB8 horse 4] gi|242137062|gb|EES23465.1| glutamine ABC transporter, permease protein [Burkholderia pseudomallei 1106b] gi|243064781|gb|EES46967.1| glutamine ABC transporter, permease protein [Burkholderia mallei PRL-20] gi|261826656|gb|ABN00010.2| glutamine ABC transporter, permease protein [Burkholderia mallei NCTC 10229] Length = 235 Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 56/186 (30%), Positives = 94/186 (50%), Gaps = 17/186 (9%) Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252 F++G++ +F R + L +YI LI G P +V + L+F P+L Sbjct: 50 GFLVGMIAGMF-----RAYGPAVLNVLAQVYIE--LIRGTPIVVQVMF---LYFALPLLA 99 Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312 G S +A++ + A++AE+VR L+++P+G EA +A+GL+ + Sbjct: 100 HVRIDGLSAA-------VVAITLNSGAYLAEVVRGALLSIPKGLTEAGLAMGLSMPRVLV 152 Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372 ++ P A R +I PL +Q + LK++SL + +G +L G II QA+EI Sbjct: 153 KIVGPLAFRRLIAPLGNQCIVSLKDTSLFIVIGVGELTRKGQEIIAGNFQAVEIWTAVAA 212 Query: 373 IYLSLS 378 IYL L+ Sbjct: 213 IYLVLT 218 >gi|21492784|ref|NP_659859.1| nopaline ABC transporter, permease protein [Rhizobium etli CFN 42] gi|21467209|gb|AAM54872.1| nopaline ABC transporter, permease protein [Rhizobium etli CFN 42] Length = 249 Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 50/156 (32%), Positives = 84/156 (53%), Gaps = 2/156 (1%) Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285 T+ G P LV + L Y P++ Q +F+ P F +IA + +AA E+V Sbjct: 57 TYAFRGTPLLVQLFLIYYGIGQLPLVRQ-SFLWAVMREP-FWCAFIAFTLNSAAHTTEVV 114 Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345 R G+ AVPRGQ+EAA ALGL+ RL++ P +R +P ++ + +LK SSLA + Sbjct: 115 RGGIQAVPRGQIEAAKALGLSRFHTARLIVFPLTLRIALPAYANEVVGMLKASSLASTIT 174 Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 ++ + ++++T E+ + YL L+++I Sbjct: 175 LLEVTGLARQLVSETFAPYEVFIAAGAFYLLLTLLI 210 >gi|330814717|ref|YP_004362892.1| hypothetical protein bgla_4p3090 [Burkholderia gladioli BSR3] gi|327374709|gb|AEA66060.1| hypothetical protein bgla_4p3090 [Burkholderia gladioli BSR3] Length = 505 Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 48/146 (32%), Positives = 79/146 (54%), Gaps = 7/146 (4%) Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291 LP LVL+ Y L P F +S F + +AL +A+IAEI R GL+ Sbjct: 68 LPLLVLLIFVYNLPQLLPATSGF-------LSDPFYAGLVALVANESAYIAEIHRGGLLG 120 Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 VP GQ EA ALG+ RL++LPQA R +P L ++++ ++K +SL + ++L+ Sbjct: 121 VPNGQHEAGRALGIGFLGRLRLIVLPQAFRIALPSLANEFITIVKLTSLVSVISLSELLL 180 Query: 352 VGGTIINQTGQAIEIILIWMFIYLSL 377 VG + Q + ++ +L+ Y+++ Sbjct: 181 VGQRLYTQNFKVLDTLLVVAAFYVAI 206 >gi|282857095|ref|ZP_06266341.1| L-cystine transport system permease protein TcyB [Pyramidobacter piscolens W5455] gi|282585030|gb|EFB90352.1| L-cystine transport system permease protein TcyB [Pyramidobacter piscolens W5455] Length = 254 Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 37/110 (33%), Positives = 64/110 (58%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 F ++ I LS AA++ E +R + +V +GQ EA I++G+T + R +++PQA R + Sbjct: 118 SFWAVVIVLSLSFAAYMGENIRGAISSVDKGQFEAGISIGMTPWQTIRRIVIPQAARVAV 177 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374 P + + + NL K++SLA VG D+ S +N T + +E + + IY Sbjct: 178 PGMVNSFANLFKSTSLAFTVGVMDMTSCAKNEVNLTYRYLEGFIALLIIY 227 >gi|212695841|ref|ZP_03303969.1| hypothetical protein ANHYDRO_00374 [Anaerococcus hydrogenalis DSM 7454] gi|212677166|gb|EEB36773.1| hypothetical protein ANHYDRO_00374 [Anaerococcus hydrogenalis DSM 7454] Length = 455 Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 42/129 (32%), Positives = 74/129 (57%), Gaps = 4/129 (3%) Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326 ++ +I +S T A+++E+VR G+ +V GQ EA ALG+TH + V++PQ ++SI+P Sbjct: 314 LAAFIIVSINTGAYLSEVVRGGINSVDEGQFEACKALGMTHSQTMFNVVIPQTIKSILPA 373 Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI----MIA 382 + ++++ +K++S+ + +L V +I T Q + LI IY L+ +I Sbjct: 374 IANEFVVNIKDTSVLNVISVTELFFVSKSIAGSTYQIFQTYLITAIIYFILTFVTTRIIL 433 Query: 383 LFMNRLNAK 391 L RLN K Sbjct: 434 LLERRLNNK 442 >gi|197117374|ref|YP_002137801.1| ABC transporter membrane protein [Geobacter bemidjiensis Bem] gi|197086734|gb|ACH38005.1| ABC transporter, membrane protein [Geobacter bemidjiensis Bem] Length = 339 Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 45/182 (24%), Positives = 89/182 (48%), Gaps = 25/182 (13%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 + PLL F+ +GLP+L G T P F + + L Sbjct: 183 RGTPLLLQLFFIYYGLPSL-----------------------GITFKP-FTAAILGLGLN 218 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 +A++ EI+R G+ ++ GQMEAA A+G+++ +A R V++PQ + ++PP+ ++++ L+K Sbjct: 219 YSAYLGEIIRGGIQSIEHGQMEAAKAIGMSYWQAMRRVVIPQTYKRLMPPIGNEFIALIK 278 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 +++L + +L+ + N +IL FIYL + + ++ + + E Sbjct: 279 DTALVSTIAMVELMRSADQMFNAYFNVTALILA-AFIYLLFTTIFTFIFEKIEIRAGIYE 337 Query: 397 KK 398 + Sbjct: 338 NR 339 >gi|330686410|gb|EGG98010.1| ABC transporter, permease protein [Staphylococcus epidermidis VCU121] Length = 229 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 40/136 (29%), Positives = 75/136 (55%) Query: 254 FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313 FN + P M I S + A+++E ++ GL++V Q+EAA +GL++ R Sbjct: 85 FNTKMNPDMVPPLMIAAITFSLHATAYLSESIKGGLLSVDTKQIEAAQTVGLSNWNVYRR 144 Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI 373 ++ PQA +P + +Q++ LLK +SLA AV +++++ I N+ Q + + + Sbjct: 145 IVFPQAFGYALPNIENQFIMLLKGTSLAFAVQVTEIMAISTEIANEGYQFVPVYTVAALF 204 Query: 374 YLSLSIMIALFMNRLN 389 Y +L+I+I L ++L Sbjct: 205 YWALAIIIELIFHKLE 220 >gi|313141609|ref|ZP_07803802.1| L-cystine transport system permease protein tcyM [Helicobacter canadensis MIT 98-5491] gi|313130640|gb|EFR48257.1| L-cystine transport system permease protein tcyM [Helicobacter canadensis MIT 98-5491] Length = 215 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 60/197 (30%), Positives = 105/197 (53%), Gaps = 19/197 (9%) Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249 F+ +LG++LSL R + L LYIS F G+P LV I L Y + P Sbjct: 8 FILGAILGLILSLI-----RIYRVPILFQLATLYISFFR--GIPVLVQIFLAY---YGIP 57 Query: 250 -VLGQFNFIGGSTVSPE------FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302 VL FN G + FM L AL C +A+++EI RS ++++ +GQ+EAA + Sbjct: 58 LVLRYFNHQYGLNIDISGIDAIYFMYLVYALYC--SAYLSEIFRSSILSIDKGQLEAAYS 115 Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362 +G+ +A +++LPQ+M +P + + ++ L+K +SL A +++ + +++ + Sbjct: 116 VGMNTTQALFIIILPQSMLLALPNILNFFIILIKETSLVFAASVPEIMGIATLEADRSSK 175 Query: 363 AIEIILIWMFIYLSLSI 379 +E+ +I IY +SI Sbjct: 176 FLEVYIIAALIYWVISI 192 >gi|22125569|ref|NP_668992.1| glutamine ABC transporter permease [Yersinia pestis KIM 10] gi|45442118|ref|NP_993657.1| glutamine ABC transporter permease [Yersinia pestis biovar Microtus str. 91001] gi|51596868|ref|YP_071059.1| glutamine ABC transporter permease protein [Yersinia pseudotuberculosis IP 32953] gi|108808000|ref|YP_651916.1| glutamine ABC transporter permease [Yersinia pestis Antiqua] gi|108812270|ref|YP_648037.1| glutamine ABC transporter permease protein [Yersinia pestis Nepal516] gi|145599205|ref|YP_001163281.1| glutamine ABC transporter permease protein [Yersinia pestis Pestoides F] gi|149365578|ref|ZP_01887613.1| putative glutamine transport system permease [Yersinia pestis CA88-4125] gi|153949155|ref|YP_001400472.1| glutamine ABC transporter permease [Yersinia pseudotuberculosis IP 31758] gi|162420264|ref|YP_001606263.1| glutamine ABC transporter permease [Yersinia pestis Angola] gi|165925600|ref|ZP_02221432.1| glutamine ABC transporter, permease protein [Yersinia pestis biovar Orientalis str. F1991016] gi|165937741|ref|ZP_02226303.1| glutamine ABC transporter, permease protein [Yersinia pestis biovar Orientalis str. IP275] gi|166008576|ref|ZP_02229474.1| glutamine ABC transporter, permease protein [Yersinia pestis biovar Antiqua str. E1979001] gi|167399647|ref|ZP_02305171.1| glutamine ABC transporter, permease protein [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167422284|ref|ZP_02314037.1| glutamine ABC transporter, permease protein [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167426964|ref|ZP_02318717.1| glutamine ABC transporter, permease protein [Yersinia pestis biovar Mediaevalis str. K1973002] gi|170023840|ref|YP_001720345.1| glutamine ABC transporter permease [Yersinia pseudotuberculosis YPIII] gi|218929602|ref|YP_002347477.1| glutamine ABC transporter permease [Yersinia pestis CO92] gi|229838047|ref|ZP_04458206.1| glutamine transporter subunit; membrane component of ABC superfamily [Yersinia pestis biovar Orientalis str. PEXU2] gi|229895246|ref|ZP_04510420.1| glutamine transporter subunit; membrane component of ABC superfamily [Yersinia pestis Pestoides A] gi|229898607|ref|ZP_04513752.1| glutamine transporter subunit; membrane component of ABC superfamily [Yersinia pestis biovar Orientalis str. India 195] gi|229902606|ref|ZP_04517723.1| glutamine transporter subunit; membrane component of ABC superfamily [Yersinia pestis Nepal516] gi|270490213|ref|ZP_06207287.1| glutamine ABC transporter permease protein [Yersinia pestis KIM D27] gi|294504265|ref|YP_003568327.1| glutamine ABC transporter permease component [Yersinia pestis Z176003] gi|21958472|gb|AAM85243.1|AE013770_9 inner membrane permease [Yersinia pestis KIM 10] gi|45436981|gb|AAS62534.1| putative glutamine transport system permease [Yersinia pestis biovar Microtus str. 91001] gi|51590150|emb|CAH21787.1| ABC glutamine transporter, permease subunit glnP [Yersinia pseudotuberculosis IP 32953] gi|108775918|gb|ABG18437.1| glutamine transport system permease [Yersinia pestis Nepal516] gi|108779913|gb|ABG13971.1| putative glutamine transport system permease [Yersinia pestis Antiqua] gi|115348213|emb|CAL21141.1| putative glutamine transport system permease [Yersinia pestis CO92] gi|145210901|gb|ABP40308.1| glutamine transport system permease [Yersinia pestis Pestoides F] gi|149291991|gb|EDM42065.1| putative glutamine transport system permease [Yersinia pestis CA88-4125] gi|152960650|gb|ABS48111.1| glutamine ABC transporter, permease protein [Yersinia pseudotuberculosis IP 31758] gi|162353079|gb|ABX87027.1| glutamine ABC transporter, permease protein [Yersinia pestis Angola] gi|165914491|gb|EDR33106.1| glutamine ABC transporter, permease protein [Yersinia pestis biovar Orientalis str. IP275] gi|165922709|gb|EDR39860.1| glutamine ABC transporter, permease protein [Yersinia pestis biovar Orientalis str. F1991016] gi|165992958|gb|EDR45259.1| glutamine ABC transporter, permease protein [Yersinia pestis biovar Antiqua str. E1979001] gi|166958790|gb|EDR55811.1| glutamine ABC transporter, permease protein [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167052151|gb|EDR63559.1| glutamine ABC transporter, permease protein [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167054066|gb|EDR63894.1| glutamine ABC transporter, permease protein [Yersinia pestis biovar Mediaevalis str. K1973002] gi|169750374|gb|ACA67892.1| polar amino acid ABC transporter, inner membrane subunit [Yersinia pseudotuberculosis YPIII] gi|229680053|gb|EEO76152.1| glutamine transporter subunit; membrane component of ABC superfamily [Yersinia pestis Nepal516] gi|229688155|gb|EEO80226.1| glutamine transporter subunit; membrane component of ABC superfamily [Yersinia pestis biovar Orientalis str. India 195] gi|229694413|gb|EEO84460.1| glutamine transporter subunit; membrane component of ABC superfamily [Yersinia pestis biovar Orientalis str. PEXU2] gi|229701732|gb|EEO89757.1| glutamine transporter subunit; membrane component of ABC superfamily [Yersinia pestis Pestoides A] gi|262362384|gb|ACY59105.1| glutamine ABC transporter permease component [Yersinia pestis D106004] gi|262366308|gb|ACY62865.1| glutamine ABC transporter permease component [Yersinia pestis D182038] gi|270338717|gb|EFA49494.1| glutamine ABC transporter permease protein [Yersinia pestis KIM D27] gi|294354724|gb|ADE65065.1| glutamine ABC transporter permease component [Yersinia pestis Z176003] gi|320014657|gb|ADV98228.1| glutamine transporter subunit; membrane component of ABC superfamily [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 218 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 40/118 (33%), Positives = 71/118 (60%) Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 + A+IAEI R ++++ G EA +ALGL+ R V+ P A+R ++PPL +Q++ +K Sbjct: 100 SGAYIAEITRGAVLSIHSGFREAGLALGLSQRGTLLYVIAPLALRRMLPPLGNQWIVSIK 159 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394 ++SL + +G A+L G II +A+EI IYL +++ ++ + RL K+ + Sbjct: 160 DTSLFIVIGVAELTRQGQEIIAGNFRAMEIWSAVAVIYLIITLALSFVLRRLERKLKI 217 >gi|126699791|ref|YP_001088688.1| amino-acid ABC transporter permease [Clostridium difficile 630] gi|255101313|ref|ZP_05330290.1| amino-acid ABC transporter, permease protein [Clostridium difficile QCD-63q42] gi|255307189|ref|ZP_05351360.1| amino-acid ABC transporter, permease protein [Clostridium difficile ATCC 43255] gi|115251228|emb|CAJ69059.1| ABC-type transport system,cystine/aminoacid-family permease [Clostridium difficile] Length = 220 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 51/179 (28%), Positives = 96/179 (53%), Gaps = 21/179 (11%) Query: 178 FPTLTMDTNAKI------FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231 FPT+ N + VFS ++G +++L S ++ K + +Y+S F G Sbjct: 12 FPTIMKSFNVTVILAISSLVFSLIIGTIVAL-----SSYYKVKVLNQICKVYVSIFR--G 64 Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291 P L+ + L+F + F + P F + I LS A+++E +R+ +++ Sbjct: 65 TP---LMPQLFFLYFGLAYMSDFV----KNMDPVFAT-SIVLSLNMGAYMSETIRASILS 116 Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 + GQ+EAA A+GLT+ + + +++PQA+R +P L + +++L+K SS+A VG D++ Sbjct: 117 IDTGQIEAAYAMGLTNLQTMKRIVIPQAVRVALPSLFNNFIDLIKGSSVAFVVGVNDIM 175 Score = 42.7 bits (99), Expect = 0.10, Method: Compositional matrix adjust. Identities = 31/88 (35%), Positives = 45/88 (51%), Gaps = 7/88 (7%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 I+ F T LA S ++ + IIGT+V K++ IC+VYV +FR P + +FFL Sbjct: 15 IMKSFNVTVILAISSLVFSLIIGTIVALSSYYKVKVLNQICKVYVSIFRGTPLMPQLFFL 74 Query: 149 Y-------KSVLSVLPIPDHSIVLPFGM 169 Y V ++ P+ SIVL M Sbjct: 75 YFGLAYMSDFVKNMDPVFATSIVLSLNM 102 >gi|325695482|gb|EGD37382.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK150] gi|327472447|gb|EGF17878.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK408] gi|328944591|gb|EGG38752.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK1087] Length = 228 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 54/166 (32%), Positives = 87/166 (52%), Gaps = 6/166 (3%) Query: 233 PTLVLIALKYQLHFDKPVLGQ-FNFIGGSTVSPEFMSLYIALSCY---TAAFIAEIVRSG 288 P ++LI Y L +L Q F +G +F LY A Y T ++EI+RS Sbjct: 64 PPILLILFFYSLF--PSLLNQIFKSLGSQVDVFKFNPLYYAFIIYSLMTTGSLSEILRSA 121 Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348 ++ V +GQ+EAA A+GLT+ +A R ++ PQA+RS +P L + +NL+K +SL + D Sbjct: 122 ILTVDKGQLEAAQAIGLTNFQAYRRIVFPQALRSALPNLANLVINLVKGTSLVFVMTVKD 181 Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394 + ++ + + Q E L+ IYL + +I L + AL Sbjct: 182 ITALAKIEASHSYQYSESYLVIFVIYLIICGLIQWMFRGLEKRYAL 227 >gi|261823406|ref|YP_003261512.1| polar amino acid ABC transporter inner membrane protein [Pectobacterium wasabiae WPP163] gi|261607419|gb|ACX89905.1| polar amino acid ABC transporter, inner membrane subunit [Pectobacterium wasabiae WPP163] Length = 369 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 31/95 (32%), Positives = 61/95 (64%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 + + + I ++ + A + AE++R GL +VPRGQ EAA+AL L++ T ++LPQA+R + Sbjct: 228 KLLRIIIGIALFFACYQAEVIRGGLQSVPRGQYEAAMALNLSYWHTTTKIILPQALRICL 287 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359 P +T+ + +KN+S + +G D+++ +++ Sbjct: 288 PAMTNHIIAAMKNTSFVIIIGLFDILTATSSVMQD 322 >gi|297564129|ref|YP_003683102.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296848578|gb|ADH70596.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 242 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 67/217 (30%), Positives = 113/217 (52%), Gaps = 27/217 (12%) Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240 LT+ A FV + V GI+ ++ RH+ + A+ +Y+ F G+ LVL+ Sbjct: 21 LTLGGIALAFVLAMVFGIMGTI------RHWLPR---AVATVYVEVFR--GIAALVLM-- 67 Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300 + + F P L G ++ F ++ +A+ A+ AE+VRS + AVPR Q+EA Sbjct: 68 -FWMAFALPQLT------GYQLADNFAAI-LAVGLNLGAYGAEVVRSSINAVPRPQVEAT 119 Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 +AL L+ + TRLV+LPQA ++P + + L+K ++++ +G ADL +V + T Sbjct: 120 VALNLSWFQRTRLVVLPQAWAQMLPTFGNLNIELMKATAVSYLIGVADLTAVAQNMRQAT 179 Query: 361 GQAIEIILIWMFI--YLSLSIMI---ALFMNRLNAKI 392 G+ + I I F+ YL ++I L R N K+ Sbjct: 180 GETV-IAFIGAFVLYYLIAQVLILGMRLLERRANRKL 215 >gi|153010784|ref|YP_001371998.1| ectoine/hydroxyectoine ABC transporter permease protein EhuD [Ochrobactrum anthropi ATCC 49188] gi|151562672|gb|ABS16169.1| Ectoine/hydroxyectoine ABC transporter permease protein EhuD [Ochrobactrum anthropi ATCC 49188] Length = 230 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 55/186 (29%), Positives = 94/186 (50%), Gaps = 28/186 (15%) Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239 T+T+ A F + VLG+V +L L R S + I PT+V++ Sbjct: 28 TVTLKAAATGFAIALVLGLVFAL----LRR---------------SPYKIISWPTVVVV- 67 Query: 240 LKYQLHFDKPVLGQFNFI-----GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294 + D P+L Q F+ V P F++ +AL +A+ +E+ R G+ A+PR Sbjct: 68 ---EFLRDTPLLVQLFFLYYVLPAYGIVLPAFLTGALALGLQYSAYTSEVYRGGIEAIPR 124 Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354 GQ EAA AL LT + R +++PQA+ IIP + + +++LK + + V D++++ Sbjct: 125 GQWEAARALNLTPWRTYRDIVIPQAIPRIIPAMGNYLVSMLKETPVLSVVSIVDMLNLAN 184 Query: 355 TIINQT 360 I ++T Sbjct: 185 LIGDRT 190 Score = 40.4 bits (93), Expect = 0.53, Method: Compositional matrix adjust. Identities = 31/91 (34%), Positives = 46/91 (50%), Gaps = 10/91 (10%) Query: 80 TSDSSYATAIL----VGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEV 135 +S S+A +IL +G T A +G A ++G + R S K+++W V VE Sbjct: 10 SSTLSFAISILPILGIGLTVTLKAAATGFAIALVLGLVFALLRRSPYKIISWPTVVVVEF 69 Query: 136 FRNIPPLVVIFFLYKSVLSVLPIPDHSIVLP 166 R+ P LV +FFLY +P + IVLP Sbjct: 70 LRDTPLLVQLFFLYYV------LPAYGIVLP 94 >gi|309810990|ref|ZP_07704788.1| ABC transporter, permease protein [Dermacoccus sp. Ellin185] gi|308434954|gb|EFP58788.1| ABC transporter, permease protein [Dermacoccus sp. Ellin185] Length = 304 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 38/124 (30%), Positives = 73/124 (58%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G + F++ +AL Y A +AE++RSG+ +P GQ EA +++GLT + R +LLPQ Sbjct: 131 GDNDNNPFIATVVALIIYNGAVVAEVIRSGVDQLPNGQREAGLSVGLTQTQTLRSILLPQ 190 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378 A+ +++P L SQ + +LK+++L V + +++ + + +I + IY++L+ Sbjct: 191 AITAMMPTLISQLVVVLKDTALGYNVLYGEMLYKAKNAAVSSANIVPMIFVVALIYIALN 250 Query: 379 IMIA 382 I+ Sbjct: 251 YTIS 254 Score = 41.6 bits (96), Expect = 0.22, Method: Compositional matrix adjust. Identities = 21/72 (29%), Positives = 39/72 (54%) Query: 78 PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137 P+ S++ IL G + T A + M+ A + G + R+S + + W+ V VE+ R Sbjct: 53 PFLEASTWQDYILPGLLGTLKAAGTAMVGAAVFGIVFAMARMSHVRPLRWVAGVIVELGR 112 Query: 138 NIPPLVVIFFLY 149 +P L+++ F+Y Sbjct: 113 AVPVLLMMLFVY 124 >gi|269955927|ref|YP_003325716.1| polar amino acid ABC transporter inner membrane subunit [Xylanimonas cellulosilytica DSM 15894] gi|269304608|gb|ACZ30158.1| polar amino acid ABC transporter, inner membrane subunit [Xylanimonas cellulosilytica DSM 15894] Length = 217 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 62/209 (29%), Positives = 106/209 (50%), Gaps = 27/209 (12%) Query: 193 SFVLGIVLSLFAT--RLSRH-FHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249 SF +G+V++L RLS H G+A Y+S LI G P LV + + + + P Sbjct: 28 SFAIGLVIALGIALLRLSTHPVLSWLGRA----YVS--LIRGTPLLVQL---FVIFYGLP 78 Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309 +G V + S +A S + AE++R+ +++VP+GQ EAA +G+ Sbjct: 79 SIG--------VVIDPWPSAIVAFSLNVGGYAAEVMRAAILSVPQGQWEAAYTIGMRRTT 130 Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369 R V+LPQA R +PPL++ +++L+K++SLA + A+ I T + Sbjct: 131 TLRRVVLPQAARVSVPPLSNTFISLVKDTSLASLILVAEAFRAAQVIAAATSE------- 183 Query: 370 WMFIYLSLSIMIALFMNRLNAKIALKEKK 398 +M +YL ++++ LF L+ E+K Sbjct: 184 FMLLYLQVALVYWLFCTVLSFGQGRIERK 212 >gi|227432438|ref|ZP_03914426.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] gi|227351804|gb|EEJ42042.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] Length = 222 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 39/124 (31%), Positives = 72/124 (58%), Gaps = 1/124 (0%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P F + IA AA++AEI R GL +VPRGQ +AA LG + + ++LPQ ++ + Sbjct: 91 PRFEAAIIAFIINYAAYLAEIFRGGLQSVPRGQYDAAKVLGFSKIQTFFKIILPQVIKIV 150 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 +P ++ +NL+K++SL +G D++ G ++ + +L+ + IYL ++ ++ L Sbjct: 151 VPSFGNEVINLVKDTSLVYVIGLGDILRAGNIAASRDVTLMPYLLVGL-IYLIMTAVVTL 209 Query: 384 FMNR 387 + R Sbjct: 210 LLRR 213 >gi|125974764|ref|YP_001038674.1| polar amino acid ABC transporter, inner membrane subunit [Clostridium thermocellum ATCC 27405] gi|256005224|ref|ZP_05430191.1| polar amino acid ABC transporter, inner membrane subunit [Clostridium thermocellum DSM 2360] gi|281418767|ref|ZP_06249786.1| polar amino acid ABC transporter, inner membrane subunit [Clostridium thermocellum JW20] gi|125714989|gb|ABN53481.1| amino acid ABC transporter membrane protein, PAAT family [Clostridium thermocellum ATCC 27405] gi|255990775|gb|EEU00890.1| polar amino acid ABC transporter, inner membrane subunit [Clostridium thermocellum DSM 2360] gi|281407851|gb|EFB38110.1| polar amino acid ABC transporter, inner membrane subunit [Clostridium thermocellum JW20] gi|316941898|gb|ADU75932.1| polar amino acid ABC transporter, inner membrane subunit [Clostridium thermocellum DSM 1313] Length = 236 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 38/122 (31%), Positives = 76/122 (62%) Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 + A+++EI+RSG+++V GQMEA ALGL++R +++PQA+++I+P L ++++ L+K Sbjct: 114 SGAYVSEIMRSGIMSVDHGQMEAGRALGLSYRVTMLKIVIPQAVKNILPTLGNEFIALIK 173 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 +S+ VG ADL I + + + L IY++L ++IA + + ++ + Sbjct: 174 ETSVVSFVGAADLYVAFSYIGTNSYEFMVPYLAMALIYIALVMIIASLIKVMERRLRKSD 233 Query: 397 KK 398 ++ Sbjct: 234 RR 235 >gi|301629485|ref|XP_002943870.1| PREDICTED: hypothetical protein LOC100490970 [Xenopus (Silurana) tropicalis] Length = 569 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 35/96 (36%), Positives = 62/96 (64%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P+F + A + AA+ AEI R+G+ +V RGQ EAA LG+ + +A R ++LPQ +R+I Sbjct: 85 PDFPAAVAAFALNYAAYFAEIFRAGIQSVERGQYEAAKVLGMNYGQAMRRIVLPQMVRNI 144 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359 +PP++++ + L+K++SL + DL+ I+ + Sbjct: 145 LPPMSNEAITLVKDTSLIYVLALNDLLRAARGIVQR 180 >gi|88856491|ref|ZP_01131149.1| putative ABC transporter permease [marine actinobacterium PHSC20C1] gi|88814358|gb|EAR24222.1| putative ABC transporter permease [marine actinobacterium PHSC20C1] Length = 340 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 34/77 (44%), Positives = 56/77 (72%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I L+ +A++AEIVR+G+++V +GQ EAA ALG++ + V++PQAMR IIPP ++ Sbjct: 170 IGLALNESAYMAEIVRAGILSVDKGQDEAATALGMSWLQTMTRVVIPQAMRIIIPPTGNE 229 Query: 331 YLNLLKNSSLAVAVGFA 347 +++LK +SL A+ F+ Sbjct: 230 VISMLKTTSLVTAIPFS 246 >gi|116333854|ref|YP_795381.1| ABC-type amino acid transport system, permease component [Lactobacillus brevis ATCC 367] gi|116099201|gb|ABJ64350.1| ABC-type amino acid transport system, permease component [Lactobacillus brevis ATCC 367] Length = 213 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 40/114 (35%), Positives = 70/114 (61%), Gaps = 2/114 (1%) Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335 YTA F AEI R GL A+P GQ E+A L LT + R +++PQ ++ ++P + ++ +NL+ Sbjct: 95 YTAYF-AEIFRGGLQAIPVGQYESARVLRLTRWQTLRRIVIPQVVKIVLPSIGNEVINLI 153 Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 K+SSL +G DL+ G +++ + ++L+ + IYL L+ + + + RL Sbjct: 154 KDSSLVYVIGLGDLLRAGNVAMSRDVTLVPLVLVGV-IYLLLTAVCTIVLKRLE 206 >gi|325686599|gb|EGD28625.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK72] Length = 228 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 54/166 (32%), Positives = 87/166 (52%), Gaps = 6/166 (3%) Query: 233 PTLVLIALKYQLHFDKPVLGQ-FNFIGGSTVSPEFMSLYIALSCY---TAAFIAEIVRSG 288 P ++LI Y L +L Q F +G +F LY A Y T ++EI+RS Sbjct: 64 PPILLILFFYSLF--PSLLNQIFKSLGSKVDVFKFNPLYYAFIIYSLMTTGSLSEILRSA 121 Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348 ++ V +GQ+EAA A+GLT+ +A R ++ PQA+RS +P L + +NL+K +SL + D Sbjct: 122 ILTVDKGQLEAAQAIGLTNFQAYRRIVFPQALRSALPNLANLVINLVKGTSLVFVMTVKD 181 Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394 + ++ + + Q E L+ IYL + +I L + AL Sbjct: 182 ITALAKIEASHSYQYSESYLVIFVIYLIICGLIQWIFRGLEKRYAL 227 >gi|317123398|ref|YP_004097510.1| amino acid ABC transporter permease [Intrasporangium calvum DSM 43043] gi|315587486|gb|ADU46783.1| amino acid ABC transporter membrane protein, PAAT family [Intrasporangium calvum DSM 43043] Length = 333 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 33/74 (44%), Positives = 53/74 (71%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I L AA++AEI R+G+++V +GQ EAA ALG++ K R ++LPQAMR I+PP ++ Sbjct: 183 IGLGLSEAAYMAEIARAGILSVDKGQAEAAQALGMSSGKTMRRIVLPQAMRVIVPPTGNE 242 Query: 331 YLNLLKNSSLAVAV 344 + ++K++SL A+ Sbjct: 243 TIAMVKDTSLLTAI 256 >gi|300718192|ref|YP_003742995.1| polar amino acid ABC transporter, inner membrane subunit [Erwinia billingiae Eb661] gi|299064028|emb|CAX61148.1| polar amino acid ABC transporter, inner membrane subunit [Erwinia billingiae Eb661] Length = 221 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 61/202 (30%), Positives = 102/202 (50%), Gaps = 18/202 (8%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 + S + G L+L R + + PLL + + GLP LV+I Y L+F V Sbjct: 29 IASLIAGSTLALLLMRAAPFWQ-------PLLRFYSSVTLGLPLLVVI---YLLYF---V 75 Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 L +++ T+S + + +AL+ Y A +IA+++R+GL A+PRGQ EA+ LGL + Sbjct: 76 LPEYDI----TLSSPVVGV-VALTLYYAPYIAQVLRAGLEALPRGQWEASRVLGLGRFRT 130 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370 V+LPQ + ++ PL + L+K+S+L V + + I++T +EI L Sbjct: 131 FSDVILPQTLPQMLSPLVGLLIGLIKDSALLSVVSVPEFMYAAKQAISETYAPLEIYLAV 190 Query: 371 MFIYLSLSIMIALFMNRLNAKI 392 IY L +I R ++ Sbjct: 191 ALIYWLLCSVIDHLARRAERRM 212 >gi|187732545|ref|YP_001881961.1| amino acid ABC transporter permease, His/Glu/Gln/Arg/opine family [Shigella boydii CDC 3083-94] gi|187429537|gb|ACD08811.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Shigella boydii CDC 3083-94] Length = 367 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 36/96 (37%), Positives = 61/96 (63%) Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315 F+ T + + + + + + +A++AE+VR GL A+P+GQ EAA +L L + K LV+ Sbjct: 221 FMAEGTSIDKLIRVLVGVILFQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQGLVI 280 Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 LPQA++ +IP L + + L K++SL + +G DL S Sbjct: 281 LPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFS 316 >gi|86357517|ref|YP_469409.1| general L-amino acid ABC transporter, permease protein [Rhizobium etli CFN 42] gi|86281619|gb|ABC90682.1| general L-amino acid ABC transporter, permease protein [Rhizobium etli CFN 42] Length = 381 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 33/94 (35%), Positives = 62/94 (65%), Gaps = 1/94 (1%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G TV + + I +S + +A++AE++R GL A+P+GQ E A +LGL + + RLV++PQ Sbjct: 238 GWTVD-KLLRAVIGVSIFASAYMAEVIRGGLQAIPKGQFEGADSLGLGYWQKMRLVIMPQ 296 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352 A++ +IP + + ++ + K++SL + DL+ + Sbjct: 297 AIKLVIPGIVNTFIGMFKDTSLVSIISMFDLLGI 330 >gi|255023479|ref|ZP_05295465.1| L-cystine transport system permease protein TcyL [Listeria monocytogenes FSL J1-208] Length = 194 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 55/165 (33%), Positives = 90/165 (54%), Gaps = 19/165 (11%) Query: 219 LPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY-- 276 L +YIS F G P +V + + + + P L I S + P LY A++ Y Sbjct: 12 LARVYISFFR--GTPIMVQL---FIVFYGIPALSSIVGIDLSQMDP----LYAAIATYAL 62 Query: 277 -TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335 +AA IAE++R+G+ +V GQ EAA ++GL R+ ++LPQA+ +P + + L Sbjct: 63 SSAATIAEVIRAGVNSVDAGQTEAAYSVGLNGRQTFLRIILPQALYQALPNFGNLVIGYL 122 Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380 K++SLA ++G D+ G T+I + A+E +Y+SLSI+ Sbjct: 123 KDTSLAFSIGVMDMSGRGQTLITLSNHALE-------VYISLSII 160 >gi|302873344|ref|YP_003841977.1| polar amino acid ABC transporter, inner membrane subunit [Clostridium cellulovorans 743B] gi|307688486|ref|ZP_07630932.1| polar amino acid ABC transporter, inner membrane subunit [Clostridium cellulovorans 743B] gi|302576201|gb|ADL50213.1| polar amino acid ABC transporter, inner membrane subunit [Clostridium cellulovorans 743B] Length = 216 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 38/131 (29%), Positives = 78/131 (59%), Gaps = 1/131 (0%) Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322 S F+++ IA AA+ AEI RSG+ ++P GQ EAA LG T + ++LPQ ++ Sbjct: 84 SYRFIAVIIAFVLNYAAYFAEIYRSGIESIPVGQYEAAKVLGYTKSQTFFKIILPQVIKR 143 Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382 I+PP+T++ + L+K++SLA + ++ + + + +++ +F Y+ ++++A Sbjct: 144 ILPPVTNETITLVKDTSLAFVLSIVEMFTAAKQVAASGTTMMPLMVAGLFYYI-FNLLVA 202 Query: 383 LFMNRLNAKIA 393 + M ++ K++ Sbjct: 203 IAMEQVEKKLS 213 >gi|294815490|ref|ZP_06774133.1| Glutamate transporter permease [Streptomyces clavuligerus ATCC 27064] gi|326443841|ref|ZP_08218575.1| glutamate transporter permease [Streptomyces clavuligerus ATCC 27064] gi|294328089|gb|EFG09732.1| Glutamate transporter permease [Streptomyces clavuligerus ATCC 27064] Length = 292 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 57/197 (28%), Positives = 103/197 (52%), Gaps = 21/197 (10%) Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265 RLS H + +P+ + F +P L+L+ YQ F+ +T+ + Sbjct: 93 RLSDHAWVR----IPVGAVVEFF-RAIPVLLLMVFAYQ-----------AFVQFTTIESD 136 Query: 266 FMSLY---IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322 F +Y L Y A+ IAEIVR+G++++P GQ +AA A+G+ +A VLLPQA+ + Sbjct: 137 FRPMYAVITGLVLYNASVIAEIVRAGILSLPNGQTDAAKAIGMRKGQAMAHVLLPQAVTA 196 Query: 323 IIPPLTSQYLNLLKNSSLAVA-VGFADLVSVGGTII-NQTGQAIEIILIWMFIYLSLSIM 380 ++P L SQ + ++K+++L A +GF++L+ I N I + + I++ ++ Sbjct: 197 MLPALVSQLVVIVKDTALGGALLGFSELLYQNRAITANYGANTIAALTVIALIFILVNFA 256 Query: 381 IALFMNRLNAKIALKEK 397 + F + L +I +K Sbjct: 257 LTSFASWLEGRIRRGKK 273 Score = 37.0 bits (84), Expect = 5.0, Method: Compositional matrix adjust. Identities = 28/92 (30%), Positives = 47/92 (51%), Gaps = 2/92 (2%) Query: 61 IGFLSERAGFEIDQGIVPYTSDSS-YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRL 119 +G ++ER ++ P+ +D+ + T +L G T A M+ A +G +G GRL Sbjct: 36 LGVMAERDQLASEK-WSPFVTDAKVWTTFLLPGLGETLKAAGISMLIALPLGAALGIGRL 94 Query: 120 SANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151 S + V VE FR IP L+++ F Y++ Sbjct: 95 SDHAWVRIPVGAVVEFFRAIPVLLLMVFAYQA 126 >gi|330952973|gb|EGH53233.1| amino acid ABC transporter permease [Pseudomonas syringae Cit 7] Length = 226 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 66/229 (28%), Positives = 114/229 (49%), Gaps = 21/229 (9%) Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223 +LP+ FLN G+ T T+ F+ + +LG L+L RLSRH +T + Y Sbjct: 13 MLPY--FLNVLGVGALT-TVGLTLAAFIVAALLGFFLALM--RLSRH---RTLGFIASCY 64 Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283 + F +P L + + L+F +G P + I AA ++E Sbjct: 65 LEIFR--NIPILTQL---FILYFGLTYIG--------ITLPAVGAAIIGFGLNGAAILSE 111 Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343 + RS + + +GQ EAA ++G+T A R+++LPQA + IP + + + LLK++SLA A Sbjct: 112 VFRSSIKTIDKGQAEAAYSIGMTRSMAMRIIVLPQAFKISIPGMANFAIGLLKDTSLASA 171 Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 ++ ++++T Q I + IYL+LS+ IA + +R ++ Sbjct: 172 AAVPEMTFKAKMLVSETYQTNLIYFLLAIIYLALSLFIAYWASRTERRL 220 Score = 43.1 bits (100), Expect = 0.084, Method: Compositional matrix adjust. Identities = 22/59 (37%), Positives = 34/59 (57%) Query: 91 VGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 VG + T L + I A ++G + RLS ++ + +I Y+E+FRNIP L +F LY Sbjct: 23 VGALTTVGLTLAAFIVAALLGFFLALMRLSRHRTLGFIASCYLEIFRNIPILTQLFILY 81 >gi|323350546|ref|ZP_08086208.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis VMC66] gi|322123228|gb|EFX94913.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis VMC66] gi|324989768|gb|EGC21711.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK353] gi|325688946|gb|EGD30954.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK115] Length = 228 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 54/166 (32%), Positives = 87/166 (52%), Gaps = 6/166 (3%) Query: 233 PTLVLIALKYQLHFDKPVLGQ-FNFIGGSTVSPEFMSLYIALSCY---TAAFIAEIVRSG 288 P ++LI Y L +L Q F +G +F LY A Y T ++EI+RS Sbjct: 64 PPILLILFFYSLF--PSLLNQIFKSLGSQVDVFKFNPLYYAFIIYSLMTTGSLSEILRSA 121 Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348 ++ V +GQ+EAA A+GLT+ +A R ++ PQA+RS +P L + +NL+K +SL + D Sbjct: 122 ILTVDKGQLEAAQAIGLTNFQAYRRIVFPQALRSALPNLANLVINLVKGTSLVFVMTVKD 181 Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394 + ++ + + Q E L+ IYL + +I L + AL Sbjct: 182 ITALAKIEASHSYQYSESYLVIFVIYLIICGLIQWIFRGLEKRYAL 227 >gi|296116099|ref|ZP_06834718.1| polar amino acid ABC transporter, inner membrane subunit [Gluconacetobacter hansenii ATCC 23769] gi|295977356|gb|EFG84115.1| polar amino acid ABC transporter, inner membrane subunit [Gluconacetobacter hansenii ATCC 23769] Length = 485 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 58/162 (35%), Positives = 86/162 (53%), Gaps = 11/162 (6%) Query: 193 SFVLGIVLSL-FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251 S V I++S+ A RL K G LL + ++ +PTL+ QL F L Sbjct: 283 SHVTAIIISIPIALRLG----GKPGPVRALLGLYIYIFRAVPTLL------QLLFVWNAL 332 Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311 QF I F++ +I+LS +A+ AEI RS L+AV GQ+ AA ALG+ + Sbjct: 333 PQFCPIFREAWFSPFLAAWISLSLNESAYQAEINRSALVAVDAGQIAAARALGMGTGQTY 392 Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353 R V+ PQA+R +PP + ++ LLK +SLA + +L+SV Sbjct: 393 RHVVFPQALRIALPPTLNDFITLLKTTSLASVISLHELLSVA 434 >gi|239635973|ref|ZP_04676990.1| L-cystine transport system permease protein TcyL [Staphylococcus warneri L37603] gi|239598438|gb|EEQ80918.1| L-cystine transport system permease protein TcyL [Staphylococcus warneri L37603] Length = 227 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 53/202 (26%), Positives = 110/202 (54%), Gaps = 31/202 (15%) Query: 191 VFSFVLGIVLSLFATRLSRHF------HEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244 + + +LG++L++ + + ++ ++ PLL + F LP +LI +Q+ Sbjct: 29 ILATILGLILTMIRIKQVPYLSTCVRVYQSFMRSTPLLLQLFLVYFALPQFLLI---FQI 85 Query: 245 ---HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301 HFD+ + +A S ++AA+++E+ R+G ++V Q+EA + Sbjct: 86 NINHFDR-----------------LFFIILAFSLHSAAYLSEVFRAGYVSVDYRQIEAGL 128 Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII-NQT 360 ++GL++ + + +++PQA+R+ IP LT+Q + L+K++SLA +G D++ II N Sbjct: 129 SVGLSYPRILKDIIIPQALRNSIPNLTTQIIELIKDTSLAFTIGIIDMMGQVQLIIGNNY 188 Query: 361 GQA-IEIILIWMFIYLSLSIMI 381 G +E+ ++ IY L+++I Sbjct: 189 GLGMLEVYVVISIIYWLLALII 210 >gi|241666975|ref|YP_002985059.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240862432|gb|ACS60097.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 213 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 43/133 (32%), Positives = 71/133 (53%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 ++++ I L+ + +A++ EI R + AVPRGQ EAA AL L + + V+LPQA+R + Sbjct: 81 SWVAVAIGLTLHASAYLGEIWRGSIEAVPRGQTEAAKALSLRYISRMKDVILPQALRVSL 140 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 P + L+K +SLA VGF +L G I NQ Q + + + +Y + + + Sbjct: 141 PATIGFLVQLIKGTSLASIVGFTELTRAGNIISNQIFQPLTVFGVVGILYFLMCCPLTIL 200 Query: 385 MNRLNAKIALKEK 397 RL + A + Sbjct: 201 GARLERRFAASAR 213 >gi|148560414|ref|YP_001259774.1| amino acid ABC transporter permease [Brucella ovis ATCC 25840] gi|148371671|gb|ABQ61650.1| amino acid ABC transporter, permease protein [Brucella ovis ATCC 25840] Length = 232 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 47/163 (28%), Positives = 87/163 (53%), Gaps = 8/163 (4%) Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279 PL +IS+ + + I + Y + P +G PE + IAL+ + ++ Sbjct: 50 PLRWISSAYVEWFRNIPFIVVLYLFFYGLPFMG--------VRLPESIVGTIALAFFASS 101 Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339 + AEI+R ++AVP+GQMEAA A+G+++ + ++ PQ +R ++PP T+ ++++K +S Sbjct: 102 YFAEIIRGAILAVPKGQMEAARAIGMSYFQGLYEIVAPQTVRLLLPPSTNTSISMVKETS 161 Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382 + + A+L G I +T EI L IY ++ + A Sbjct: 162 VLSTITVAELTYQGLVIQGETFAPFEIFLTTAAIYWMITAIFA 204 >gi|53715883|ref|YP_106604.1| glutamine ABC transporter permease protein [Burkholderia mallei ATCC 23344] gi|53723353|ref|YP_112338.1| glutamine ABC transporter permease protein [Burkholderia pseudomallei K96243] gi|76817724|ref|YP_336643.1| glutamine ABC transporter permease [Burkholderia pseudomallei 1710b] gi|254356207|ref|ZP_04972484.1| glutamine ABC transporter, permease protein [Burkholderia mallei 2002721280] gi|52213767|emb|CAH39822.1| glutamine transport system permease protein [Burkholderia pseudomallei K96243] gi|52421853|gb|AAU45423.1| glutamine ABC transporter, permease protein [Burkholderia mallei ATCC 23344] gi|76582197|gb|ABA51671.1| glutamine ABC transporter, permease protein [Burkholderia pseudomallei 1710b] gi|148025190|gb|EDK83359.1| glutamine ABC transporter, permease protein [Burkholderia mallei 2002721280] Length = 218 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 56/186 (30%), Positives = 95/186 (51%), Gaps = 17/186 (9%) Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252 F++G++ +F R + L +YI LI G P +V + L+F P+L Sbjct: 33 GFLVGMIAGMF-----RAYGPAVLNVLAQVYIE--LIRGTPIVVQVMF---LYFALPLLA 82 Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312 G S + +A++ + A++AE+VR L+++P+G EA +A+GL+ + Sbjct: 83 HVRIDGLS-------AAVVAITLNSGAYLAEVVRGALLSIPKGLTEAGLAMGLSMPRVLV 135 Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372 ++ P A R +I PL +Q + LK++SL + +G +L G II QA+EI Sbjct: 136 KIVGPLAFRRLIAPLGNQCIVSLKDTSLFIVIGVGELTRKGQEIIAGNFQAVEIWTAVAA 195 Query: 373 IYLSLS 378 IYL L+ Sbjct: 196 IYLVLT 201 >gi|309811071|ref|ZP_07704869.1| ABC transporter, permease protein [Dermacoccus sp. Ellin185] gi|308435035|gb|EFP58869.1| ABC transporter, permease protein [Dermacoccus sp. Ellin185] Length = 226 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 44/141 (31%), Positives = 78/141 (55%), Gaps = 7/141 (4%) Query: 263 SPEFMS------LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316 SP+F + I L+ Y AA++ E +RSG+ +P GQ EAA ++GLT ++ R V+L Sbjct: 86 SPDFFTSNNFRLAVIGLTVYHAAYVCEALRSGVNTIPLGQAEAARSIGLTFSQSLREVIL 145 Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII-NQTGQAIEIILIWMFIYL 375 PQA R I PL + + L KN+++AV +G ++ ++ + + G + ++ Sbjct: 146 PQAFRGAIVPLGNALIALTKNTTVAVVIGVMEMAAMLAKVTEDDPGLLNQAFFASALAFV 205 Query: 376 SLSIMIALFMNRLNAKIALKE 396 +L++ L + L K+A+K Sbjct: 206 ALTLPTGLLVGYLGKKLAVKR 226 >gi|307299193|ref|ZP_07578994.1| polar amino acid ABC transporter, inner membrane subunit [Thermotogales bacterium mesG1.Ag.4.2] gi|306914989|gb|EFN45375.1| polar amino acid ABC transporter, inner membrane subunit [Thermotogales bacterium mesG1.Ag.4.2] Length = 215 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 54/187 (28%), Positives = 94/187 (50%), Gaps = 31/187 (16%) Query: 212 HEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYI 271 +EK +++P L I + +G P + G SP F ++ I Sbjct: 47 YEKILRSIPELVILFLIFYGFPKI-----------------------GIRFSP-FAAVII 82 Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 L ++A+ ++I R + +V QM AA +LG+T+ K ++LPQA+R +PP T+++ Sbjct: 83 GLGFRSSAYQSQIFRGAINSVSSAQMRAARSLGMTNLKGFINIVLPQAIRIALPPWTNEF 142 Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 +LK+SSLA A+G +L+ GG II + M IYL++++M + +N Sbjct: 143 TIVLKDSSLAYALGVTELLRQGGYIIATKYEP-------MLIYLTVAVMYFIVTIAINKT 195 Query: 392 IALKEKK 398 + EK+ Sbjct: 196 LGSVEKR 202 >gi|90419716|ref|ZP_01227625.1| permease protein, ABC-type amino acid transporter [Aurantimonas manganoxydans SI85-9A1] gi|90335757|gb|EAS49505.1| permease protein, ABC-type amino acid transporter [Aurantimonas manganoxydans SI85-9A1] Length = 226 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 50/170 (29%), Positives = 90/170 (52%), Gaps = 14/170 (8%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 + SF G+ L F T + R F K A+ Y+ + I G P LV + + + + P Sbjct: 28 ILSFAFGLSLG-FMTAVVRLFGPKPLAAIARFYV--WFIRGTPLLVQL---FVIFYGLPS 81 Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 +G + F + I + A+ +EI+R+ L ++ +GQ EAA A+G+T +A Sbjct: 82 VG--------ILIDAFPAALIGFTLSVGAYTSEIIRAALSSINKGQWEAAYAIGMTRNQA 133 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 + ++PQA+R +PPL++ +++L+K++SLA A+ +L I+ T Sbjct: 134 MKRTIVPQAVRVAVPPLSNSFISLVKDTSLAAAITVPELFQQAQRIVATT 183 >gi|325277399|ref|ZP_08143019.1| polar amino acid ABC transporter inner membrane subunit [Pseudomonas sp. TJI-51] gi|324097472|gb|EGB95698.1| polar amino acid ABC transporter inner membrane subunit [Pseudomonas sp. TJI-51] Length = 215 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 35/95 (36%), Positives = 59/95 (62%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 +M+ IAL+ +T+AF+AE R + A+PRGQ EA+ +L +T + R V+LPQA+R + Sbjct: 85 WMAAAIALTLFTSAFLAETWRGCVEAIPRGQWEASGSLAMTRLEQMRYVILPQALRIAVA 144 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 P + ++K +++ +GF +L GG + N T Sbjct: 145 PTVGFSVQVVKGTAVTSIIGFTELTKTGGMLANAT 179 >gi|228913540|ref|ZP_04077169.1| Amino acid ABC transporter [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228846127|gb|EEM91149.1| Amino acid ABC transporter [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|324324900|gb|ADY20160.1| amino acid ABC transporter permease [Bacillus thuringiensis serovar finitimus YBT-020] Length = 209 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 47/157 (29%), Positives = 92/157 (58%), Gaps = 14/157 (8%) Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244 T + + +F++G++L+ T L+R + + + +Y+S +I G P LV + + + Sbjct: 10 TTIPLTLITFIIGLILATL-TALARISGSRILQWIARIYVS--IIRGTPLLVQL---FII 63 Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304 + P L V P + + + S A+ +EI+R+ ++++P+GQ EAA +G Sbjct: 64 FYGLPTLN-------VEVEP-YTAAVVGFSLNVGAYASEIIRASILSIPKGQWEAAYTIG 115 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341 +T+ +A + V+LPQA R IPPL++ +++L+K++SLA Sbjct: 116 MTYPQALKRVILPQATRVSIPPLSNTFISLVKDTSLA 152 Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust. Identities = 15/41 (36%), Positives = 26/41 (63%) Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 I+ TL R+S ++++ WI R+YV + R P LV +F ++ Sbjct: 24 ILATLTALARISGSRILQWIARIYVSIIRGTPLLVQLFIIF 64 >gi|15805592|ref|NP_294288.1| amino acid ABC transporter permease [Deinococcus radiodurans R1] gi|6458260|gb|AAF10145.1|AE001914_7 amino acid ABC transporter, permease protein [Deinococcus radiodurans R1] Length = 226 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 64/218 (29%), Positives = 112/218 (51%), Gaps = 18/218 (8%) Query: 177 SFPTLTMDTNAKI--FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234 + PTL T + + + VLG+ L FA L+R + L L++S I G P Sbjct: 16 ALPTLLAATPVTLGFALAAMVLGLPLG-FAVALARLSRLGWLRTLSGLFVS--FIRGTPL 72 Query: 235 LVLIALKYQLHFDKPVLG-QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293 LV I + +++ P LG QF+ + G IAL+ AA+++E +R+ ++++P Sbjct: 73 LVQI---FVIYYGLPSLGIQFSPVVGGV---------IALTLNAAAYLSETIRAAILSIP 120 Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353 GQ EAA +LGL+ + RL++LPQA R +P L++ + L+K++SL + +L+ Sbjct: 121 PGQREAATSLGLSGAQTMRLIILPQAARVALPSLSNTLIGLVKDTSLVSVITVVELLRSA 180 Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 +I +T + L IY +S ++ + L + Sbjct: 181 QLVIARTFEPFGPYLAAALIYWLVSSLLEVVQRALERR 218 >gi|323698174|ref|ZP_08110086.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio sp. ND132] gi|323458106|gb|EGB13971.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio desulfuricans ND132] Length = 364 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 35/73 (47%), Positives = 52/73 (71%) Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335 +++A+IAE+VR GL AVP GQ++AA ALGL+ T V+LPQA+R ++P L + + L Sbjct: 240 FSSAYIAEVVRGGLQAVPGGQLDAAKALGLSPWMITLFVVLPQALRYVLPALIGRCIALF 299 Query: 336 KNSSLAVAVGFAD 348 K++SL + VG D Sbjct: 300 KDTSLVIIVGLLD 312 >gi|322834720|ref|YP_004214747.1| polar amino acid ABC transporter inner membrane subunit [Rahnella sp. Y9602] gi|321169921|gb|ADW75620.1| polar amino acid ABC transporter, inner membrane subunit [Rahnella sp. Y9602] Length = 357 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 34/76 (44%), Positives = 53/76 (69%) Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335 + +A++AE+VR GL A+P+GQ EAA +L L + K LV+LPQA++ +IP L + + L Sbjct: 231 FQSAYVAEVVRGGLQALPKGQTEAAESLALGYWKTQGLVILPQALKMVIPGLVNTIIALF 290 Query: 336 KNSSLAVAVGFADLVS 351 K++SL + +G DL S Sbjct: 291 KDTSLVIIIGLFDLFS 306 >gi|229493104|ref|ZP_04386899.1| ABC-type amino acid transport system, permease component [Rhodococcus erythropolis SK121] gi|229320134|gb|EEN85960.1| ABC-type amino acid transport system, permease component [Rhodococcus erythropolis SK121] Length = 324 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 63/226 (27%), Positives = 107/226 (47%), Gaps = 15/226 (6%) Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFAT----------RLSRHFHEKTGKALPLL 222 N G +PT AK + + + I L+L+ T L R + + Sbjct: 54 NPGWDWPTFAQYFTAKSVLAALWMTIKLTLWGTILGFGLGVFLALGRLSKNPVLQVIAWT 113 Query: 223 YISTF----LIFGLPTLVLIALKYQ-LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT 277 YI F LI L I YQ L P +F S V F + I L+ + Sbjct: 114 YIWAFRSIPLIVQLLFWFNITYLYQTLSLGIPFGPEFFTFQVSGVIGGFTAAVIGLALHQ 173 Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 AA+ AEI+RSG+I+V GQ+EAA +LG+ + ++LPQAMR+I+P ++ + L K Sbjct: 174 AAYSAEIIRSGIISVDHGQIEAAHSLGIPRSRQFFKIVLPQAMRAILPNAANEVIGLFKG 233 Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 +S+ + A+L I + G+ + ++++ Y+ L+ ++++ Sbjct: 234 TSIVSTMAIAELFYQVQVIFGRNGRVVPLLMVATIWYIILTTLLSI 279 >gi|91784321|ref|YP_559527.1| ABC polar amino acid transporter, inner membrane subunit [Burkholderia xenovorans LB400] gi|91688275|gb|ABE31475.1| amino acid ABC transporter membrane protein, PAAT family [Burkholderia xenovorans LB400] Length = 265 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 60/193 (31%), Positives = 99/193 (51%), Gaps = 22/193 (11%) Query: 195 VLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF---GLPTLVLIALKYQLHFDKPVL 251 V+G+VL L +ALPL ++ I+ G P LV + L Y F P L Sbjct: 45 VIGVVLGLSGMH----------RALPLRVLNQGYIWFFRGTPVLVQLVLIY---FGLPYL 91 Query: 252 GQFNF------IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305 F+ +G +S ++ IA + AA+++EI R+ + ++ GQMEAA+A+G+ Sbjct: 92 VGFDLFPAVMSLGPLHLSGALVAGVIAFGLHEAAYMSEITRASVGSIDPGQMEAALAVGM 151 Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365 T A R ++LPQA+ I+P L +Q+ N+LK ++L +G +++ V + T E Sbjct: 152 TPAMAMRRIVLPQAVPLIVPALGNQFNNMLKTTALLSVIGVSEMFRVAEQMQAATFMTFE 211 Query: 366 IILIWMFIYLSLS 378 + L YL L+ Sbjct: 212 VYLGVSVYYLMLT 224 >gi|78213328|ref|YP_382107.1| amino acid ABC transporter permease [Synechococcus sp. CC9605] gi|78197787|gb|ABB35552.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Synechococcus sp. CC9605] Length = 324 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 42/116 (36%), Positives = 69/116 (59%), Gaps = 3/116 (2%) Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339 +IAE VR GL A+P Q EAA LGL+ R++ +LV+LPQA+R +P LT+Q + LL+N+S Sbjct: 202 YIAEDVRGGLQAIPPTQREAAAVLGLSPRQSLQLVVLPQALRVALPSLTNQAVGLLQNTS 261 Query: 340 LAVAVGFADLVSVGGTIINQT---GQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 L +G +L+ + +++ G+ +E+ L +Y +AL L ++ Sbjct: 262 LMAILGLVELLGISRSLLANPAFIGRYLEVYLWLAAVYWLACTAMALLARHLEVQL 317 >gi|296104985|ref|YP_003615131.1| general L-amino acid transport system permease protein [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295059444|gb|ADF64182.1| general L-amino acid transport system permease protein [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 367 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 36/96 (37%), Positives = 60/96 (62%) Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315 F+ T + + + + + +A++AE+VR GL A+P+GQ EAA +L L + K LV+ Sbjct: 221 FMAEGTTIDKLIRALVGVILFQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQGLVI 280 Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 LPQA++ +IP L + + L K++SL + +G DL S Sbjct: 281 LPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFS 316 >gi|307352566|ref|YP_003893617.1| polar amino acid ABC transporter inner membrane subunit [Methanoplanus petrolearius DSM 11571] gi|307155799|gb|ADN35179.1| polar amino acid ABC transporter, inner membrane subunit [Methanoplanus petrolearius DSM 11571] Length = 236 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 48/140 (34%), Positives = 80/140 (57%), Gaps = 11/140 (7%) Query: 223 YISTFLIF--GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280 +I+ F+ F GLP LVL+ L Y G F +G ++P F+ I L AA+ Sbjct: 59 FIAVFVWFFRGLPILVLLFLFY--------FGIFPLMGMGDLAPFFVGA-IVLGLRGAAY 109 Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340 ++I R + ++ GQM AA +LG+T A + V+LPQ+ R +P +++Y N+L +S++ Sbjct: 110 QSQIFRGAIQSISEGQMTAARSLGMTKLSAIKNVILPQSFRIALPGWSNEYPNILTDSAV 169 Query: 341 AVAVGFADLVSVGGTIINQT 360 A+G A+L++ I +QT Sbjct: 170 CYAIGVAELLTRSSQIASQT 189 >gi|298717428|ref|YP_003730070.1| ABC transport system permease [Pantoea vagans C9-1] gi|298361617|gb|ADI78398.1| Putative ABC transport system, permease protein [Pantoea vagans C9-1] Length = 308 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 42/137 (30%), Positives = 78/137 (56%), Gaps = 3/137 (2%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 +F + I L+ AA+ AEI+R G++ V GQ+EAA ALGL+ + T ++LPQA+R+II Sbjct: 146 QFPAAVIGLTLVQAAYSAEIIRGGILGVDHGQVEAASALGLSASRRTFRIILPQALRAII 205 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI---WMFIYLSLSIMI 381 P ++ ++L K +S+ + +L I N+ + I ++++ W I ++ +I Sbjct: 206 PTAFNEIISLAKGTSMVYVLAMPELFYTIQMIYNRNQEVIPLLMVGAAWYLIITTVLSVI 265 Query: 382 ALFMNRLNAKIALKEKK 398 ++ R A+ +E + Sbjct: 266 QYYVERWLARSVNREPQ 282 >gi|282852733|ref|ZP_06262075.1| ABC transporter, permease protein [Lactobacillus gasseri 224-1] gi|282556475|gb|EFB62095.1| ABC transporter, permease protein [Lactobacillus gasseri 224-1] Length = 158 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 43/142 (30%), Positives = 75/142 (52%), Gaps = 4/142 (2%) Query: 253 QFNFIGGSTVS---PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309 F F G TV P + + +A AA+ AEI R GL AVP GQ EAA LGL+ + Sbjct: 13 DFYFYGLPTVGIVFPRYEAALVAFIINYAAYFAEIFRGGLQAVPVGQFEAAQVLGLSRWQ 72 Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369 ++ PQ ++ + P + ++ +NL+K+SSL +G DL+ G + + ++L+ Sbjct: 73 TINRIVRPQVVKIVFPSIGNELINLVKDSSLVYVIGLGDLLRAGNVATARDVSLVPLVLV 132 Query: 370 WMFIYLSLSIMIALFMNRLNAK 391 +YL+++ ++ + + K Sbjct: 133 GC-VYLAMTAVLTALLRVVEKK 153 >gi|328885476|emb|CCA58715.1| glutamate permease [Streptomyces venezuelae ATCC 10712] Length = 296 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 40/96 (41%), Positives = 66/96 (68%), Gaps = 4/96 (4%) Query: 260 STVSPEFMSLY---IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316 +T+S +F LY L Y A+ IAE+VR+G++++PRGQ +AA ALG+ + VLL Sbjct: 131 TTISSDFRPLYAVVTGLVLYNASVIAEVVRAGVLSLPRGQGDAAEALGMRKGQTMTYVLL 190 Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVA-VGFADLVS 351 PQA+ ++P L SQ + ++K+++L A +G+A+L+S Sbjct: 191 PQAVTVMLPALVSQLVVIVKDTALGGALLGYAELLS 226 Score = 37.0 bits (84), Expect = 5.8, Method: Compositional matrix adjust. Identities = 27/78 (34%), Positives = 42/78 (53%), Gaps = 4/78 (5%) Query: 78 PYTSDSS-YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136 P+ +DS + T +L G + T A ++ A +G L+G GRLS ++ V VE F Sbjct: 52 PFVTDSRVWTTYLLPGLMETLKAAALSILIALPLGALLGIGRLSDHRWVRVPVGAVVEFF 111 Query: 137 RNIPPLVVIFF---LYKS 151 R IP L+++ F LY+ Sbjct: 112 RAIPVLLLMMFAAALYRE 129 >gi|167750328|ref|ZP_02422455.1| hypothetical protein EUBSIR_01302 [Eubacterium siraeum DSM 15702] gi|167656688|gb|EDS00818.1| hypothetical protein EUBSIR_01302 [Eubacterium siraeum DSM 15702] gi|291556411|emb|CBL33528.1| amino acid ABC transporter membrane protein, PAAT family (TC 3.A.1.3.-) [Eubacterium siraeum V10Sc8a] Length = 247 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 69/248 (27%), Positives = 118/248 (47%), Gaps = 27/248 (10%) Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS 208 Y+ + L + I+ G+ L N PTL KIF F+ + I L L L Sbjct: 4 YRKIKEELNMTGEQIMKVTGILLENL---IPTL------KIFGFTLLFSIPLGLIVAAL- 53 Query: 209 RHFHEKTGKALPLLYISTFLIF---GLP-TLVLIALKYQLHFDKPVL-GQFNFIGG--ST 261 K + P+ +++ I G P L +I + Y L F K G F+ S Sbjct: 54 -----KMCRFKPISWLTNLYILIMRGTPLMLQIIVVYYALPFLKTATKGSGGFVESLLSG 108 Query: 262 VSPE-----FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316 V P F + IA AA+ AEI R G+ ++PRGQ EAA ALG+T + ++L Sbjct: 109 VDPAAESFMFTMVIIAFVLNYAAYFAEIFRGGIESIPRGQYEAAAALGMTKAQTFFRIIL 168 Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376 PQ ++ I+P +++ + L+K++SLA V +++++ + + + + +F ++ Sbjct: 169 PQVIKRIVPASSNEVITLVKDTSLANVVAYSEIMLAAKQQMMNYSSLVPLFIAGVFYFVM 228 Query: 377 LSIMIALF 384 +++ ALF Sbjct: 229 ATVLTALF 236 >gi|88855456|ref|ZP_01130120.1| putative glutamate transporter permease [marine actinobacterium PHSC20C1] gi|88815363|gb|EAR25221.1| putative glutamate transporter permease [marine actinobacterium PHSC20C1] Length = 222 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 57/207 (27%), Positives = 99/207 (47%), Gaps = 31/207 (14%) Query: 193 SFVLGIVLSLF------ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246 +FVLGI+++ A RL + + + +PLL + F + LP L L F Sbjct: 36 AFVLGILIATMRISPVPALRLFATVYTEILRNIPLLLVLFFCAYVLPIL-----GVDLDF 90 Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306 F+ + L+ YT+ F+AE VRSG VP GQ EAA ++G+ Sbjct: 91 -------------------FLLAALGLTLYTSPFVAEAVRSGFNGVPVGQAEAARSIGMG 131 Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 + L++LPQA R ++PPL + ++ L KN+S+A +L G + + Sbjct: 132 FTQTVGLIILPQAGRMVVPPLINVFIALTKNTSVAGIFFVNELFKATYAAARDNGDVVVL 191 Query: 367 ILIW-MFIYLSLSIMIALFMNRLNAKI 392 L++ + +YL++++ + L + K+ Sbjct: 192 TLVYAVALYLAITVPLGLIAGAIEKKV 218 >gi|226304942|ref|YP_002764900.1| ABC transporter permease protein [Rhodococcus erythropolis PR4] gi|226184057|dbj|BAH32161.1| putative ABC transporter permease protein [Rhodococcus erythropolis PR4] Length = 324 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 63/226 (27%), Positives = 107/226 (47%), Gaps = 15/226 (6%) Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFAT----------RLSRHFHEKTGKALPLL 222 N G +PT AK + + + I L+L+ T L R + + Sbjct: 54 NPGWDWPTFAQYFTAKSVLAALWMTIKLTLWGTILGFGLGVFLALGRLSKNPVLQVIAWT 113 Query: 223 YISTF----LIFGLPTLVLIALKYQ-LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT 277 YI F LI L I YQ L P +F S V F + I L+ + Sbjct: 114 YIWAFRSIPLIVQLLFWFNITYLYQTLSLGIPFGPEFFTFQVSGVIGGFTAAVIGLALHQ 173 Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 AA+ AEI+RSG+I+V GQ+EAA +LG+ + ++LPQAMR+I+P ++ + L K Sbjct: 174 AAYSAEIIRSGIISVDHGQIEAAHSLGIPRSRQFFKIVLPQAMRAILPNAANEVIGLFKG 233 Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 +S+ + A+L I + G+ + ++++ Y+ L+ ++++ Sbjct: 234 TSIVSTMAIAELFYQVQVIFGRNGRVVPLLMVATIWYIILTTLLSI 279 >gi|89091827|ref|ZP_01164782.1| hypothetical protein MED92_06666 [Oceanospirillum sp. MED92] gi|89083562|gb|EAR62779.1| hypothetical protein MED92_06666 [Oceanospirillum sp. MED92] Length = 217 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 41/131 (31%), Positives = 74/131 (56%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P F++ I LS YT AF+AE+ R G +V + A +LG+T+ + R V P +RS+ Sbjct: 87 PPFVAGTIILSLYTMAFMAEVFRGGFESVNNSMIIAGRSLGMTYWQTIRHVRFPIGLRSV 146 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 P L+++K+S+L +G+ +L+ +I++T Q +EI++ Y +S +++ Sbjct: 147 FPAWLGVALSVIKDSALVSVIGYVELLRTSDQLISRTQQPLEILIGVGLFYFLISYPLSV 206 Query: 384 FMNRLNAKIAL 394 + R+ K AL Sbjct: 207 YGRRIERKHAL 217 >gi|330503969|ref|YP_004380838.1| amino acid ABC transporter ATP-binding protein [Pseudomonas mendocina NK-01] gi|328918255|gb|AEB59086.1| amino acid ABC transporter ATP-binding protein [Pseudomonas mendocina NK-01] Length = 504 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 52/167 (31%), Positives = 85/167 (50%), Gaps = 7/167 (4%) Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291 +P LVL+ Y L Q G +S F + AL AA++AEI R GL++ Sbjct: 67 VPLLVLLIFVYNL-------PQLMPASGKVLSNPFYAGLFALVLTEAAYMAEIHRGGLLS 119 Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 V +GQ EAA ALG+ A RL+++PQA R +P LT++Y+ ++K +SL + ++L+ Sbjct: 120 VAKGQREAARALGIGRLGAQRLIVVPQAFRIALPTLTNEYVTIVKLTSLVSVISLSELLL 179 Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 VG + Q +E + Y+ + + + L + L +K Sbjct: 180 VGQRLYAQNFLVLETLGAVAVYYVLIVSLFGWGLQHLERHLDLARRK 226 >gi|319784338|ref|YP_004143814.1| polar amino acid ABC transporter inner membrane subunit [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317170226|gb|ADV13764.1| polar amino acid ABC transporter, inner membrane subunit [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 385 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 30/88 (34%), Positives = 59/88 (67%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 +F+ I +S + AA++AE+VR GL A+P+GQ E A +LGL + + +++PQA++ +I Sbjct: 247 KFLRALIGVSLFAAAYMAEVVRGGLQAIPKGQYEGADSLGLGYWQKMYFIVMPQALKLVI 306 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSV 352 P + + ++ + K++SL + + DL+ + Sbjct: 307 PGIVNTFIGMFKDTSLVIIISMFDLLGI 334 >gi|315605385|ref|ZP_07880428.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Actinomyces sp. oral taxon 180 str. F0310] gi|315312954|gb|EFU61028.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Actinomyces sp. oral taxon 180 str. F0310] Length = 225 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 34/85 (40%), Positives = 54/85 (63%) Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333 + + A + ++VR LIA+PR Q E+A ALGLT R+ R V+LPQ +R + PP + Sbjct: 100 TLWGGAEMGDLVRGALIAIPRHQYESAYALGLTPRQTMRRVILPQTLRRLAPPAVNLITR 159 Query: 334 LLKNSSLAVAVGFADLVSVGGTIIN 358 ++K +SL V +G +++ VG II+ Sbjct: 160 MIKTTSLVVLIGVVEVLKVGQQIID 184 >gi|294791036|ref|ZP_06756194.1| glutamate permease [Scardovia inopinata F0304] gi|294458933|gb|EFG27286.1| glutamate permease [Scardovia inopinata F0304] Length = 229 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 46/122 (37%), Positives = 64/122 (52%), Gaps = 19/122 (15%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYI-ALSC 275 K +PL I F++ G V GQ + F L I LS Sbjct: 65 KNMPLTIIMVFMVLG------------------VFGQLKLKFSDNFTINFFWLAITGLSL 106 Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335 YTAAF++E +RSG+ +P GQ EAA ALGLT ++TR +++PQA+R + PL + + LL Sbjct: 107 YTAAFVSESLRSGINTIPVGQAEAARALGLTFMQSTRSIIMPQALRGSVAPLGNTLIALL 166 Query: 336 KN 337 KN Sbjct: 167 KN 168 >gi|254460499|ref|ZP_05073915.1| amino acid ABC transporter, permease protein [Rhodobacterales bacterium HTCC2083] gi|206677088|gb|EDZ41575.1| amino acid ABC transporter, permease protein [Rhodobacteraceae bacterium HTCC2083] Length = 431 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 37/91 (40%), Positives = 61/91 (67%), Gaps = 1/91 (1%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I ++ ++AA+IAE+VR GL A+P+GQ EAA +LGL + ++ RL++LPQA++ IP + + Sbjct: 301 IMITMFSAAYIAEVVRGGLAALPKGQAEAAGSLGLDYAQSMRLIILPQALKISIPGIVNV 360 Query: 331 YLNLLKNSSLAVAVGFADLVS-VGGTIINQT 360 + L K++ L + DLV + G I+ T Sbjct: 361 AVGLFKDTVLVSVISMFDLVGMIRGPILAST 391 >gi|84499806|ref|ZP_00998094.1| ABC glutamate/glutamine/aspartate/asparagine transporter, inner membrane subunit BztC [Oceanicola batsensis HTCC2597] gi|84392950|gb|EAQ05161.1| ABC glutamate/glutamine/aspartate/asparagine transporter, inner membrane subunit BztC [Oceanicola batsensis HTCC2597] Length = 434 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 67/230 (29%), Positives = 114/230 (49%), Gaps = 29/230 (12%) Query: 158 IPDHSIVLPFGM-FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTG 216 IPD S ++P + + +R + L + S +GIVL+L R Sbjct: 204 IPDLSRIIPISLPEVPSRDMGGFMLNLILGTVCISLSLPIGIVLAL-----GRRSQMPLI 258 Query: 217 KALPLLYISTFLIFGLP--TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALS 274 K + +++I I G+P TL+ +A L + P F+ I + + I ++ Sbjct: 259 KWICVIFIE--FIRGVPLITLLFVA-NVVLAYFLPPGSNFDLI---------LRVIIMIT 306 Query: 275 CYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNL 334 + +A+IAE++R GL A+P+GQ EAA +LGL + +A RL++LPQA++ IP + + + L Sbjct: 307 MFASAYIAEVIRGGLAALPKGQYEAADSLGLDYPQAMRLIILPQALKISIPGIVNVAVGL 366 Query: 335 LKNSSLAVAVGFADLVS-VGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 K+++L + D+V + G I+ T W +Y L I AL Sbjct: 367 FKDTTLVSVISMFDMVGMIRGPILASTD--------WNGVYWELFIFAAL 408 >gi|116695744|ref|YP_841320.1| ABC-type transporter, permease component [Ralstonia eutropha H16] gi|113530243|emb|CAJ96590.1| ABC-type transporter, permease component [Ralstonia eutropha H16] Length = 252 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 40/111 (36%), Positives = 66/111 (59%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IA++ A+ EI+R+GL AV R Q+EAA ALG+T + R V L A + P LTSQ Sbjct: 95 IAMTVNLGAYSTEIIRAGLQAVHRSQLEAAAALGMTRWQLIRHVALVPAFEKVYPALTSQ 154 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 + ++ SS+ + +L +V + +QT + E ++ MF+Y+ L++M+ Sbjct: 155 FTLMMLTSSVVSTISVEELTAVASQVDSQTFRTFESYILVMFVYIGLALML 205 >gi|150397301|ref|YP_001327768.1| polar amino acid ABC transporter inner membrane subunit [Sinorhizobium medicae WSM419] gi|150028816|gb|ABR60933.1| polar amino acid ABC transporter, inner membrane subunit [Sinorhizobium medicae WSM419] Length = 376 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 40/130 (30%), Positives = 67/130 (51%), Gaps = 3/130 (2%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I + + +A++AE VRSGL AVPR Q EAA +LG++ R ++LPQA+R +PPL Sbjct: 247 IGFTLFYSAYVAEYVRSGLQAVPREQTEAARSLGMSEFDINRSIVLPQALRVAVPPLVGN 306 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS---LSIMIALFMNR 387 L++ + L +G D + G I+ ++ F++L+ + +I R Sbjct: 307 VLDIFNTAPLVFIIGLTDFLRAGQMILANPQYGDRTYEVYAFLFLTYFLVGSLITFVARR 366 Query: 388 LNAKIALKEK 397 L +A + Sbjct: 367 LETHLARGNR 376 Score = 36.2 bits (82), Expect = 9.9, Method: Compositional matrix adjust. Identities = 14/40 (35%), Positives = 27/40 (67%) Query: 110 IGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 +G L+ GR S + WIC Y+EV R++P ++V+++++ Sbjct: 188 VGILLAFGRRSRFSSMRWICMGYIEVMRSVPLIMVVYWIW 227 >gi|313896660|ref|ZP_07830208.1| ABC transporter, permease protein [Selenomonas sp. oral taxon 137 str. F0430] gi|312974577|gb|EFR40044.1| ABC transporter, permease protein [Selenomonas sp. oral taxon 137 str. F0430] Length = 253 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 42/106 (39%), Positives = 61/106 (57%), Gaps = 2/106 (1%) Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 A+I+E+ R+ AVPRGQ EAA+ GL+ +A V+LPQA +P + +NLLK Sbjct: 111 GAYISEVFRAAYKAVPRGQYEAAVCAGLSPVQAFAHVMLPQAAIVALPNFGNASINLLKE 170 Query: 338 SSLAVAVGFADLVSVGGTIINQT--GQAIEIILIWMFIYLSLSIMI 381 SLA +G DL+ G II Q IEI L M +Y ++ +++ Sbjct: 171 GSLAYTIGLIDLIGKGNLIIAQNFGAYGIEIYLACMLVYWAVVLLL 216 >gi|297202813|ref|ZP_06920210.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces sviceus ATCC 29083] gi|297148210|gb|EFH28892.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces sviceus ATCC 29083] Length = 304 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 44/147 (29%), Positives = 84/147 (57%), Gaps = 4/147 (2%) Query: 256 FIGGSTVSPEFMSLY---IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312 ++ S +S E LY L Y A+ +AEIVR+G++++PRGQ EAA A+GL + Sbjct: 126 YVRSSDISSEQRPLYAVVTGLVLYNASVLAEIVRAGILSLPRGQTEAAYAVGLRKGQTMT 185 Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSL-AVAVGFADLVSVGGTIINQTGQAIEIILIWM 371 +LLPQA+ +++P + SQ + ++K+++L V + F +L++ T+ I ++ Sbjct: 186 SILLPQAVTAMLPAIVSQLVVIVKDTALGGVMLSFPELLNSRSTLAANYANVIPSFIVVG 245 Query: 372 FIYLSLSIMIALFMNRLNAKIALKEKK 398 I++ L+ ++ F + L ++ +K Sbjct: 246 IIFIVLNFLLTSFASWLEQRLRRSKKS 272 Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust. Identities = 23/70 (32%), Positives = 37/70 (52%) Query: 78 PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137 P+T+ ++ T +L G NT A M+ A +G + G R+S + V + VE FR Sbjct: 52 PFTTGEAWTTYLLPGLGNTLKAAAISMVIALPLGAVFGIARMSDHAWVRGVAGTVVEFFR 111 Query: 138 NIPPLVVIFF 147 IP L+++ F Sbjct: 112 AIPVLLLMLF 121 >gi|210623571|ref|ZP_03293897.1| hypothetical protein CLOHIR_01847 [Clostridium hiranonis DSM 13275] gi|210153441|gb|EEA84447.1| hypothetical protein CLOHIR_01847 [Clostridium hiranonis DSM 13275] Length = 219 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 36/129 (27%), Positives = 80/129 (62%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 F + I LS ++A++AE +R+ + ++ +GQMEA+ ++G+T+ ++ ++LPQA+R I Sbjct: 85 SFYAALIILSLASSAYMAESLRAAITSIHKGQMEASQSIGMTYMQSMYHIILPQAIRVAI 144 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 P L S ++N++K++SL A+G ++++ + + + +E + + IY ++ ++ Sbjct: 145 PTLFSSFINIVKDTSLVFAIGVKEMMAQAQLEGSSSYKYLEAFVCVLLIYWMITSIMTFV 204 Query: 385 MNRLNAKIA 393 +RL K+ Sbjct: 205 QSRLEKKMG 213 >gi|299541860|ref|ZP_07052183.1| amino-acid ABC transporter permease protein [Lysinibacillus fusiformis ZC1] gi|298725598|gb|EFI66239.1| amino-acid ABC transporter permease protein [Lysinibacillus fusiformis ZC1] Length = 235 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 40/106 (37%), Positives = 64/106 (60%), Gaps = 2/106 (1%) Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 AA ++E++RS +A+P+GQ EAA+++GLT +A R ++ PQA+ +P + + LL+ Sbjct: 109 AAIMSEVIRSAYLAIPKGQFEAAVSVGLTPFQAYRRIIFPQALVVALPNFGNGMIALLQE 168 Query: 338 SSLAVAVGFADLVSVGGTII--NQTGQAIEIILIWMFIYLSLSIMI 381 +LA +G D+V II N A+EI + IY LSI+I Sbjct: 169 GALAYTIGLIDIVGKANLIIASNINAHALEIYIALAIIYWVLSIII 214 >gi|296501588|ref|YP_003663288.1| cystine transport system permease [Bacillus thuringiensis BMB171] gi|296322640|gb|ADH05568.1| cystine transport system permease protein [Bacillus thuringiensis BMB171] Length = 232 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 47/157 (29%), Positives = 92/157 (58%), Gaps = 14/157 (8%) Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244 T + + +F++G++L+ T L+R + + + +Y+S +I G P LV + + + Sbjct: 33 TTIPLTLITFIIGLILATL-TALARISGSRILQWIARIYVS--IIRGTPLLVQL---FII 86 Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304 + P L V P + + + S A+ +EI+R+ ++++P+GQ EAA +G Sbjct: 87 FYGLPTLN-------IEVEP-YTAAVVGFSLNVGAYASEIIRASILSIPKGQWEAAYTIG 138 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341 +T+ +A + V+LPQA R IPPL++ +++L+K++SLA Sbjct: 139 MTYPQALKRVILPQATRVSIPPLSNTFISLVKDTSLA 175 Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust. Identities = 15/41 (36%), Positives = 26/41 (63%) Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 I+ TL R+S ++++ WI R+YV + R P LV +F ++ Sbjct: 47 ILATLTALARISGSRILQWIARIYVSIIRGTPLLVQLFIIF 87 >gi|327480953|gb|AEA84263.1| cystine ABC transporter, permease protein, putative [Pseudomonas stutzeri DSM 4166] Length = 222 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 39/128 (30%), Positives = 71/128 (55%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I S AA+ AEI+R+ + ++ RGQ EAA ++G+ + +LPQA R+ +PPL + Sbjct: 94 IGFSLNMAAYTAEILRAAIASIDRGQWEAAASIGMGRAQTLYRAILPQAARTALPPLGNS 153 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 +++L+K+++LA + +L I +T + + L IY L+ ++A F RL Sbjct: 154 FISLVKDTALAATIQVPELFRQAQLITARTFEIFTMYLAAALIYWLLASVLAYFQGRLEH 213 Query: 391 KIALKEKK 398 ++ E+ Sbjct: 214 RVNRHEQD 221 >gi|330882634|gb|EGH16783.1| amino acid ABC transporter permease [Pseudomonas syringae pv. glycinea str. race 4] Length = 365 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 32/81 (39%), Positives = 57/81 (70%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I + + +A+IAE+VR G+ A+P+GQ EAA A+ L + ++ LV LPQA++ +IP + + Sbjct: 235 IGVILFQSAYIAEVVRGGMQAIPKGQYEAASAMDLGYWRSMGLVFLPQALKMVIPGIVNT 294 Query: 331 YLNLLKNSSLAVAVGFADLVS 351 ++ L K++SL + +G DL++ Sbjct: 295 FIALFKDTSLVIIIGLFDLLN 315 >gi|324992502|gb|EGC24423.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK405] gi|324995968|gb|EGC27879.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK678] gi|325697414|gb|EGD39300.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK160] gi|327460726|gb|EGF07061.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK1] gi|327488810|gb|EGF20609.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK1058] Length = 228 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 54/166 (32%), Positives = 87/166 (52%), Gaps = 6/166 (3%) Query: 233 PTLVLIALKYQLHFDKPVLGQ-FNFIGGSTVSPEFMSLYIALSCY---TAAFIAEIVRSG 288 P ++LI Y L +L Q F +G +F LY A Y T ++EI+RS Sbjct: 64 PPILLILFFYSLF--PSLLNQIFKNLGSQVDVFKFNPLYYAFIIYSLMTTGSLSEILRSA 121 Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348 ++ V +GQ+EAA A+GLT+ +A R ++ PQA+RS +P L + +NL+K +SL + D Sbjct: 122 ILTVDKGQLEAAQAIGLTNFQAYRRIVFPQALRSALPNLANLVINLVKGTSLVFVMTVKD 181 Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394 + ++ + + Q E L+ IYL + +I L + AL Sbjct: 182 ITALAKIEASHSYQYSESYLVIFVIYLIICGLIQWMFRGLEKRYAL 227 >gi|16801503|ref|NP_471771.1| hypothetical protein lin2441 [Listeria innocua Clip11262] gi|16414963|emb|CAC97668.1| lin2441 [Listeria innocua Clip11262] Length = 235 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 62/208 (29%), Positives = 102/208 (49%), Gaps = 15/208 (7%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 +F F++ I+L+L R +H + + + Y+S F P ++ I L Y P+ Sbjct: 31 LFGFIIAILLTLI-----RMYHVRFLEPIAKFYVSFFR--STPAILHIMLIY---LGIPL 80 Query: 251 LGQF-----NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305 + F + + P + + IALS A++ EI+RSG+IAV GQMEAA ++G Sbjct: 81 IVDFLSKSLDLSISANKIPVVVFVIIALSFTAGAYLTEILRSGIIAVDIGQMEAAYSMGY 140 Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365 TH +A R VLLPQA + +P T+ + L +S+A V ++ + + + +E Sbjct: 141 THGQAIRKVLLPQAFMTSLPNFTNLCIGFLHTTSIAAIVAVPEITGMATIVASDNYAFLE 200 Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIA 393 + IY L+I+I L IA Sbjct: 201 AFIGAALIYWFLTILIEAINYILEKNIA 228 >gi|293193554|ref|ZP_06609824.1| amino acid ABC transporter, permease protein [Actinomyces odontolyticus F0309] gi|292819910|gb|EFF78912.1| amino acid ABC transporter, permease protein [Actinomyces odontolyticus F0309] Length = 225 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 34/85 (40%), Positives = 54/85 (63%) Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333 + + A + ++VR LIA+PR Q E+A ALGLT R+ R V+LPQ +R + PP + Sbjct: 100 TLWGGAEMGDLVRGALIAIPRHQYESAYALGLTPRQTMRRVILPQTLRRLAPPAVNLITR 159 Query: 334 LLKNSSLAVAVGFADLVSVGGTIIN 358 ++K +SL V +G +++ VG II+ Sbjct: 160 MIKTTSLVVLIGVVEVLKVGQQIID 184 >gi|222102596|ref|YP_002539635.1| ABC transporter membrane spanning protein (nopaline) [Agrobacterium vitis S4] gi|221739197|gb|ACM39930.1| ABC transporter membrane spanning protein (nopaline) [Agrobacterium vitis S4] Length = 230 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 42/128 (32%), Positives = 76/128 (59%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +AL+ TAA+ +EI+R + VPRG +EAA ALG++ R ++LP A+R IP ++ Sbjct: 102 LALTLNTAAYGSEILRGAIRNVPRGLIEAASALGMSRLANLRFIILPLALRQAIPAYGNE 161 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 + ++K +SLA + ++ + +I+Q+ +AIE+ + IYL L+ +I + L A Sbjct: 162 IILMVKGTSLASIITLMEVTGIAQGLISQSYRAIEVFMAAGAIYLLLNFIIVRALTTLEA 221 Query: 391 KIALKEKK 398 ++ L + Sbjct: 222 RLTLYRTR 229 >gi|308178222|ref|YP_003917628.1| polar amino acid ABC transporter inner membrane and binding protein subunit [Arthrobacter arilaitensis Re117] gi|307745685|emb|CBT76657.1| polar amino acid ABC transporter, inner membrane and binding protein subunit [Arthrobacter arilaitensis Re117] Length = 489 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 41/104 (39%), Positives = 65/104 (62%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + LS A++AEIVR G+ +V GQ+EA+ +LGL + K+ + V++PQA + + P L +Q Sbjct: 366 LTLSLNAGAYVAEIVRGGIQSVDPGQLEASRSLGLGYGKSMQKVVIPQAFKMMTPSLINQ 425 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374 + LK+SSL +A+GF +L+ G I + E +LI IY Sbjct: 426 LIISLKDSSLLLAIGFTELLYQGQQIYAANFRVTETLLIVGIIY 469 >gi|295099883|emb|CBK88972.1| amino acid ABC transporter membrane protein, PAAT family (TC 3.A.1.3.-) [Eubacterium cylindroides T2-87] Length = 186 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 33/82 (40%), Positives = 56/82 (68%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IA+S + A+ E++RSG+ V +GQ EA LGL+ + +LV+LPQA + I+PP+ S+ Sbjct: 102 IAMSINSGAYSTELIRSGINGVDKGQWEACETLGLSSWQTMKLVILPQAFKLIVPPVISE 161 Query: 331 YLNLLKNSSLAVAVGFADLVSV 352 ++ L+K+SSL +G +L+ + Sbjct: 162 FITLIKDSSLTSCIGAIELLKL 183 >gi|260221678|emb|CBA30483.1| hypothetical protein Csp_C23770 [Curvibacter putative symbiont of Hydra magnipapillata] Length = 271 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 64/209 (30%), Positives = 110/209 (52%), Gaps = 20/209 (9%) Query: 185 TNAKIFVFSFVL----GIVLSLFATRLSRHFHEKTG--------KALPLLYISTFLIF-G 231 T + V SF L G++L+L A+R S+H + G + LP L I ++ F G Sbjct: 49 TTVYVAVISFTLAASIGLLLAL-ASR-SKHVWLRQGARFYIEVIRGLPALVILLYVTFVG 106 Query: 232 LPTLVLIALKYQLHFDKPVLGQF-NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290 P LV + YQ + + ++ + VS + +AL+ +AF+AE+ R+GL Sbjct: 107 APALVNL---YQWACEGWIAKEWLPDVQVRDVSNTVRGI-VALALAYSAFLAEVFRAGLQ 162 Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 +V R Q+EAA A+GL RLV+ PQA+R ++P L + ++ ++K+SSL +G D+ Sbjct: 163 SVERAQIEAAQAIGLNRWLTFRLVVWPQAVRRVLPVLGNDFIAMVKDSSLVSVLGVNDIT 222 Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSI 379 +G + + +E + +YL L++ Sbjct: 223 QLGKLYASSSFLTVETYNVVAVLYLMLTV 251 >gi|42780022|ref|NP_977269.1| amino acid ABC transporter, permease protein [Bacillus cereus ATCC 10987] gi|42735940|gb|AAS39877.1| amino acid ABC transporter, permease protein [Bacillus cereus ATCC 10987] Length = 234 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 47/157 (29%), Positives = 92/157 (58%), Gaps = 14/157 (8%) Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244 T + + +F++G++L+ T L+R + + + +Y+S +I G P LV + + + Sbjct: 35 TTIPLTLITFIIGLILATL-TALARISGSRILQWIARIYVS--IIRGTPLLVQL---FII 88 Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304 + P L V P + + + S A+ +EI+R+ ++++P+GQ EAA +G Sbjct: 89 FYGLPTLN-------IEVEP-YTAAVVGFSLNVGAYASEIIRASILSIPKGQWEAAYTIG 140 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341 +T+ +A + V+LPQA R IPPL++ +++L+K++SLA Sbjct: 141 MTYPQALKRVILPQATRVSIPPLSNTFISLVKDTSLA 177 Score = 39.3 bits (90), Expect = 1.0, Method: Compositional matrix adjust. Identities = 15/41 (36%), Positives = 26/41 (63%) Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 I+ TL R+S ++++ WI R+YV + R P LV +F ++ Sbjct: 49 ILATLTALARISGSRILQWIARIYVSIIRGTPLLVQLFIIF 89 >gi|116617692|ref|YP_818063.1| ABC-type amino acid transport system, permease component [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] gi|116096539|gb|ABJ61690.1| amino acid ABC transporter membrane protein, PAAT family [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] Length = 213 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 39/124 (31%), Positives = 72/124 (58%), Gaps = 1/124 (0%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P F + IA AA++AEI R GL +VPRGQ +AA LG + + ++LPQ ++ + Sbjct: 82 PRFEAAIIAFIINYAAYLAEIFRGGLQSVPRGQYDAAKVLGFSKIQTFFKIILPQVIKIV 141 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 +P ++ +NL+K++SL +G D++ G ++ + +L+ + IYL ++ ++ L Sbjct: 142 VPSFGNEVINLVKDTSLVYVIGLGDILRAGNIAASRDVTLMPYLLVGL-IYLIMTAVVTL 200 Query: 384 FMNR 387 + R Sbjct: 201 LLRR 204 >gi|299069324|emb|CBJ40590.1| amino acid ABC transporter transmembrane protein [Ralstonia solanacearum CMR15] Length = 248 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 50/171 (29%), Positives = 91/171 (53%), Gaps = 11/171 (6%) Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286 +++ G+P L+LI Y F P+ FIG F ++ L Y +++E+VR Sbjct: 69 YVVRGVPLLMLILWVY---FLVPL-----FIGRDVSG--FATMLCTLVIYEGVYLSEVVR 118 Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346 +G+ A+P+GQMEAA ALG ++ A R+V+LPQA+ +++P + +Q+++ +K ++L + Sbjct: 119 AGIEALPKGQMEAARALGHSYLGAMRVVILPQALYNMLPSMLAQFVSTIKETTLGYVINV 178 Query: 347 ADLVSVGGTIINQ-TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 +L I N + +I + IY ++ + L +IA K Sbjct: 179 PELTFAANQINNALLSKPFQIFFLLAVIYFAVCWSLTRAARALEHRIAAKR 229 >gi|227877816|ref|ZP_03995840.1| glutamine ABC superfamily ATP binding cassette transporter membrane protein [Lactobacillus crispatus JV-V01] gi|256850694|ref|ZP_05556118.1| glutamine ABC transporter membrane protein [Lactobacillus crispatus MV-1A-US] gi|227862577|gb|EEJ70072.1| glutamine ABC superfamily ATP binding cassette transporter membrane protein [Lactobacillus crispatus JV-V01] gi|256712465|gb|EEU27462.1| glutamine ABC transporter membrane protein [Lactobacillus crispatus MV-1A-US] Length = 217 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 62/206 (30%), Positives = 100/206 (48%), Gaps = 31/206 (15%) Query: 193 SFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPTLVLIALKYQLHF 246 SFV+G++L L ++ G + LPLL I F FGLP L Sbjct: 34 SFVVGLILGLVRYMKIKYVSAIVGFIIDIIRNLPLLLIIFFTYFGLPQL----------- 82 Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306 G +P S+ AL + A +AEIVRSG+ +V GQME A + G++ Sbjct: 83 ------------GIVTNPTTASI-AALVIFEGAMLAEIVRSGIGSVDSGQMEGARSNGMS 129 Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ-TGQAIE 365 + +A V++PQA+ ++I L SQ+++L+K++SLA + +L+ I +Q T I Sbjct: 130 YGQAMYHVIMPQALHNMISALLSQFVSLVKDTSLATIIVLPELLYHAQIIYSQNTTYLIP 189 Query: 366 IILIWMFIYLSLSIMIALFMNRLNAK 391 + +I +Y + ++ N L K Sbjct: 190 MYVIIAIMYFIVCFCLSTIANYLQKK 215 >gi|146282695|ref|YP_001172848.1| cystine ABC tranporter, permease protein, putative [Pseudomonas stutzeri A1501] gi|145570900|gb|ABP80006.1| cystine ABC tranporter, permease protein, putative [Pseudomonas stutzeri A1501] Length = 222 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 39/128 (30%), Positives = 71/128 (55%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I S AA+ AEI+R+ + ++ RGQ EAA ++G+ + +LPQA R+ +PPL + Sbjct: 94 IGFSLNMAAYTAEILRAAIASIDRGQWEAAASIGMGRAQTLYRAILPQAARTALPPLGNS 153 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 +++L+K+++LA + +L I +T + + L IY L+ ++A F RL Sbjct: 154 FISLVKDTALAATIQVPELFRQAQLITARTFEIFTMYLAAALIYWLLASVLAYFQGRLEH 213 Query: 391 KIALKEKK 398 ++ E+ Sbjct: 214 RVNRHEQD 221 >gi|229126284|ref|ZP_04255302.1| Amino acid ABC transporter [Bacillus cereus BDRD-Cer4] gi|229137673|ref|ZP_04266278.1| Amino acid ABC transporter [Bacillus cereus BDRD-ST26] gi|229195190|ref|ZP_04321965.1| Amino acid ABC transporter [Bacillus cereus m1293] gi|228588419|gb|EEK46462.1| Amino acid ABC transporter [Bacillus cereus m1293] gi|228645788|gb|EEL02017.1| Amino acid ABC transporter [Bacillus cereus BDRD-ST26] gi|228657276|gb|EEL13096.1| Amino acid ABC transporter [Bacillus cereus BDRD-Cer4] Length = 207 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 47/157 (29%), Positives = 92/157 (58%), Gaps = 14/157 (8%) Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244 T + + +F++G++L+ T L+R + + + +Y+S +I G P LV + + + Sbjct: 8 TTIPLTLITFIIGLILATL-TALARISGSRILQWIARIYVS--IIRGTPLLVQL---FII 61 Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304 + P L V P + + + S A+ +EI+R+ ++++P+GQ EAA +G Sbjct: 62 FYGLPTLN-------IEVEP-YTAAVVGFSLNVGAYASEIIRASILSIPKGQWEAAYTIG 113 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341 +T+ +A + V+LPQA R IPPL++ +++L+K++SLA Sbjct: 114 MTYPQALKRVILPQATRVSIPPLSNTFISLVKDTSLA 150 Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust. Identities = 15/41 (36%), Positives = 26/41 (63%) Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 I+ TL R+S ++++ WI R+YV + R P LV +F ++ Sbjct: 22 ILATLTALARISGSRILQWIARIYVSIIRGTPLLVQLFIIF 62 >gi|218507774|ref|ZP_03505652.1| general L-amino acid ABC transporter, permease protein [Rhizobium etli Brasil 5] Length = 338 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 32/94 (34%), Positives = 62/94 (65%), Gaps = 1/94 (1%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G TV + + I +S + +A++AE++R GL A+P+GQ E A +LGL + + RL+++PQ Sbjct: 195 GWTVD-KLLRAIIGVSIFASAYMAEVIRGGLQAIPKGQFEGADSLGLGYWQKMRLIIMPQ 253 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352 A++ +IP + + ++ + K++SL + DL+ + Sbjct: 254 AIKLVIPGIVNTFIGMFKDTSLVSIISMFDLLGI 287 >gi|73662246|ref|YP_301027.1| truncated ABC-type amino acid transport system periplasmic component [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] gi|72494761|dbj|BAE18082.1| truncated ABC-type amino acid transport system periplasmic component [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] Length = 398 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 33/80 (41%), Positives = 59/80 (73%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IAL +A+IAEI+R+G+ AV GQ EAA +LGLT+ + + V+LPQA+++I+P L ++ Sbjct: 273 IALVINCSAYIAEIIRAGINAVDSGQTEAARSLGLTYGQTMKSVILPQAIKNILPALGNE 332 Query: 331 YLNLLKNSSLAVAVGFADLV 350 ++ ++K SS+ +G ++++ Sbjct: 333 FVTVIKESSIVSVIGVSEIM 352 Score = 36.6 bits (83), Expect = 6.9, Method: Compositional matrix adjust. Identities = 23/74 (31%), Positives = 38/74 (51%) Query: 83 SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142 + Y L G NT ++ G++ T+ G + +LS KL++W+ Y+E R P L Sbjct: 188 TKYGNFFLKGIQNTILISIVGVLLGTVFGAGIALLKLSKIKLLSWLASAYIEFLRGTPLL 247 Query: 143 VVIFFLYKSVLSVL 156 V +F +Y +VL Sbjct: 248 VQVFLVYFGTTAVL 261 >gi|300817472|ref|ZP_07097688.1| ABC transporter, permease protein [Escherichia coli MS 107-1] gi|300824984|ref|ZP_07105083.1| ABC transporter, permease protein [Escherichia coli MS 119-7] gi|300925984|ref|ZP_07141807.1| ABC transporter, permease protein [Escherichia coli MS 182-1] gi|301326286|ref|ZP_07219659.1| ABC transporter, permease protein [Escherichia coli MS 78-1] gi|300417928|gb|EFK01239.1| ABC transporter, permease protein [Escherichia coli MS 182-1] gi|300522550|gb|EFK43619.1| ABC transporter, permease protein [Escherichia coli MS 119-7] gi|300529770|gb|EFK50832.1| ABC transporter, permease protein [Escherichia coli MS 107-1] gi|300846987|gb|EFK74747.1| ABC transporter, permease protein [Escherichia coli MS 78-1] gi|323183030|gb|EFZ68429.1| general L-amino acid transport system permease protein aapM [Escherichia coli 1357] gi|324020753|gb|EGB89972.1| ABC transporter, permease protein [Escherichia coli MS 117-3] Length = 347 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 34/76 (44%), Positives = 53/76 (69%) Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335 + +A++AE+VR GL A+P+GQ EAA +L L + K LV+LPQA++ +IP L + + L Sbjct: 221 FQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQGLVILPQALKLVIPGLVNTIIALF 280 Query: 336 KNSSLAVAVGFADLVS 351 K++SL + +G DL S Sbjct: 281 KDTSLVIIIGLFDLFS 296 >gi|255656163|ref|ZP_05401572.1| amino-acid ABC transporter, permease protein [Clostridium difficile QCD-23m63] Length = 223 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 47/160 (29%), Positives = 91/160 (56%), Gaps = 15/160 (9%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 VFS ++G +++L S ++ K + +Y+S F G P L+ + L+F Sbjct: 31 VFSLIIGTIVAL-----SSYYKVKVLNQICKVYVSIFR--GTP---LMPQLFFLYFGLAY 80 Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 + F + P F + I LS A+++E +R+ ++++ +GQ+EAA A+GLT+ + Sbjct: 81 MSDFV----KNMDPVFAT-SIVLSLNMGAYMSETIRASILSIDKGQIEAAYAMGLTNLQT 135 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 + +++PQA+R +P L + +++L+K SS+A VG D++ Sbjct: 136 MKRIVIPQAVRVALPSLFNNFIDLIKGSSVAFVVGVNDIM 175 Score = 42.7 bits (99), Expect = 0.10, Method: Compositional matrix adjust. Identities = 31/88 (35%), Positives = 45/88 (51%), Gaps = 7/88 (7%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 I+ F T LA S ++ + IIGT+V K++ IC+VYV +FR P + +FFL Sbjct: 15 IMKSFNVTVILAISSLVFSLIIGTIVALSSYYKVKVLNQICKVYVSIFRGTPLMPQLFFL 74 Query: 149 Y-------KSVLSVLPIPDHSIVLPFGM 169 Y V ++ P+ SIVL M Sbjct: 75 YFGLAYMSDFVKNMDPVFATSIVLSLNM 102 >gi|212711636|ref|ZP_03319764.1| hypothetical protein PROVALCAL_02711 [Providencia alcalifaciens DSM 30120] gi|212685738|gb|EEB45266.1| hypothetical protein PROVALCAL_02711 [Providencia alcalifaciens DSM 30120] Length = 250 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 41/138 (29%), Positives = 80/138 (57%), Gaps = 1/138 (0%) Query: 260 STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319 T P ++ AL+ T+A++A V++G++A+ +GQ A ++LG + V+LPQA Sbjct: 90 GTEIPGVTAVVCALALITSAYLAHGVKAGILAIGQGQWNAGLSLGFNRWQVLWNVVLPQA 149 Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG-QAIEIILIWMFIYLSLS 378 +R ++P +Q++ L+K++SLA VG A+L + + N+ +E+ L FIY + Sbjct: 150 LRMMVPSFINQWVALIKDTSLAYIVGVAELSFLATQVNNREMIYPLEVFLFVAFIYFVMC 209 Query: 379 IMIALFMNRLNAKIALKE 396 + + + N++ K++ K Sbjct: 210 LSVEILANQVAKKLSDKR 227 >gi|210624308|ref|ZP_03294312.1| hypothetical protein CLOHIR_02268 [Clostridium hiranonis DSM 13275] gi|210153092|gb|EEA84098.1| hypothetical protein CLOHIR_02268 [Clostridium hiranonis DSM 13275] Length = 221 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 40/127 (31%), Positives = 75/127 (59%) Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326 +S I+++ ++AFI EI+R GL+AV +GQ EAA+++GL + V++PQA SI+P Sbjct: 92 VSFVISVALNSSAFIVEILRGGLLAVDKGQREAALSIGLNKFQVMTQVVIPQAFVSILPS 151 Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386 L + ++ +KN+++A +G +++S + + +E + +Y L + I L N Sbjct: 152 LGNTFVGAVKNTAIAFTIGVVEILSESKILAARGFNYMEAYIAAGIVYWILILAIDLVQN 211 Query: 387 RLNAKIA 393 RL ++ Sbjct: 212 RLEKRVC 218 >gi|126724901|ref|ZP_01740744.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Rhodobacterales bacterium HTCC2150] gi|126706065|gb|EBA05155.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Rhodobacterales bacterium HTCC2150] Length = 431 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 34/87 (39%), Positives = 59/87 (67%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+ + I ++ ++AA+IAE+VR GL A+P+GQ EA +LGL + +A RL++LPQA++ IP Sbjct: 296 FLRVVIMITLFSAAYIAEVVRGGLAALPKGQYEAGDSLGLDYPQAMRLIILPQALKISIP 355 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSV 352 + + + L K++ L + DL+ + Sbjct: 356 GIVNIAVGLFKDTVLVSVISMFDLIGM 382 >gi|50085185|ref|YP_046695.1| glutamate/aspartate ABC transporter membrane protein [Acinetobacter sp. ADP1] gi|49531161|emb|CAG68873.1| glutamate/aspartate transport protein (ABC superfamily, membrane) [Acinetobacter sp. ADP1] Length = 233 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 41/123 (33%), Positives = 73/123 (59%) Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 AL YTAA ++E +R+G+ V GQ AA A+G T ++ R V+LP A R++ P +TS+ Sbjct: 103 ALGLYTAARVSEHIRAGINTVSSGQKFAASAMGFTTGQSYRYVILPVAYRTVWPTITSEA 162 Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 +N+ KNS++ A+ + + T+ +T Q I I+++ +YL ++ I M + + Sbjct: 163 MNVFKNSAVLYALSVLNFFAYTKTMREETSQDIIILILSTPVYLVITYTIKFIMAWIEKR 222 Query: 392 IAL 394 +A+ Sbjct: 223 MAV 225 Score = 43.1 bits (100), Expect = 0.080, Method: Compositional matrix adjust. Identities = 24/56 (42%), Positives = 33/56 (58%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147 G V W A + + A +G+L+G R NK +A I YVE+FRNIP +V +FF Sbjct: 7 GVVTMIWTAVAAFLIAFFLGSLLGIIRTLPNKPLALIGDTYVEIFRNIPLIVQLFF 62 >gi|327190792|gb|EGE57860.1| general L-amino acid ABC transporter, permease protein [Rhizobium etli CNPAF512] Length = 359 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 32/94 (34%), Positives = 62/94 (65%), Gaps = 1/94 (1%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G TV + + I +S + +A++AE++R GL A+P+GQ E A +LGL + + RL+++PQ Sbjct: 216 GWTVD-KLLRAIIGVSIFASAYMAEVIRGGLQAIPKGQFEGADSLGLGYWQKMRLIIMPQ 274 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352 A++ +IP + + ++ + K++SL + DL+ + Sbjct: 275 AIKLVIPGIVNTFIGMFKDTSLVSIISMFDLLGI 308 >gi|282932376|ref|ZP_06337807.1| L-cystine transport system permease protein TcyB [Lactobacillus jensenii 208-1] gi|297206408|ref|ZP_06923803.1| L-cystine ABC superfamily ATP binding cassette transporter, membrane protein YckJ [Lactobacillus jensenii JV-V16] gi|281303490|gb|EFA95661.1| L-cystine transport system permease protein TcyB [Lactobacillus jensenii 208-1] gi|297149534|gb|EFH29832.1| L-cystine ABC superfamily ATP binding cassette transporter, membrane protein YckJ [Lactobacillus jensenii JV-V16] Length = 225 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 40/128 (31%), Positives = 74/128 (57%), Gaps = 7/128 (5%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + S T A+ +E +R+ + +VP+ Q EAA ++GLT+RK V+ PQA+R IPPL++ Sbjct: 101 LTFSLNTGAYASETIRASISSVPQDQWEAAYSIGLTYRKVLSRVIFPQAVRIAIPPLSNS 160 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++ L+K++SLA ++ ++ V I + Q M +Y ++I+ A+F + L+ Sbjct: 161 FIGLVKDTSLASSITLVEMFMVSQEIASHNYQP-------MIMYSIVAIIYAIFCSLLSL 213 Query: 391 KIALKEKK 398 E++ Sbjct: 214 LQLYLERR 221 >gi|199597488|ref|ZP_03210917.1| ABC-type amino acid transport system, permease component [Lactobacillus rhamnosus HN001] gi|229552063|ref|ZP_04440788.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus rhamnosus LMS2-1] gi|258508265|ref|YP_003171016.1| amino acid ABC transporter permease [Lactobacillus rhamnosus GG] gi|258539477|ref|YP_003173976.1| amino acid ABC transporter permease [Lactobacillus rhamnosus Lc 705] gi|199591511|gb|EDY99588.1| ABC-type amino acid transport system, permease component [Lactobacillus rhamnosus HN001] gi|229314580|gb|EEN80553.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus rhamnosus LMS2-1] gi|257148192|emb|CAR87165.1| ABC transporter, amino acid transporter permease protein [Lactobacillus rhamnosus GG] gi|257151153|emb|CAR90125.1| ABC transporter, amino acid transporter permease protein [Lactobacillus rhamnosus Lc 705] gi|259649583|dbj|BAI41745.1| amino acid ABC transporter permease component [Lactobacillus rhamnosus GG] Length = 218 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 53/178 (29%), Positives = 89/178 (50%), Gaps = 13/178 (7%) Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235 LS +T+ A V + LG++LS+ + K GK+L Y+ F G P L Sbjct: 12 LSGVKMTLGIFAITLVGAIPLGLILSVGLIPKPKSLLGKAGKSLLEGYVWVFR--GTPLL 69 Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295 + + + + P++G V F + +A AA+ AEI R G A+ G Sbjct: 70 LQLMF---IFYGLPIIG--------IVFDRFSAALVAFILNYAAYFAEIFRGGFGAIDEG 118 Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353 Q EA+ L +T +A R V++PQ ++ ++P + ++ +NL+K+SSL +G DL+ G Sbjct: 119 QFEASTVLNMTRWQALRFVVIPQVVKIVLPSIGNEVINLVKDSSLVYVIGLGDLLRAG 176 >gi|163856320|ref|YP_001630618.1| putative inner membrane component of binding-protein-dependent transport system [Bordetella petrii DSM 12804] gi|163260048|emb|CAP42349.1| putative inner membrane component of binding-protein-dependent transport system [Bordetella petrii] Length = 217 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 52/165 (31%), Positives = 89/165 (53%), Gaps = 11/165 (6%) Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290 G+P +VL+ + ++F P +G I + V + L IA S Y A E R+G+ Sbjct: 64 GIPIIVLL---FYIYFVMPDMG----IALTAVQAAIIGLGIAYSAYQA----ENFRAGIE 112 Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 A+ RGQ+EAA+A+G++ R V+LPQA++ ++PP + + +LK+SS A + A+L Sbjct: 113 AIDRGQVEAAMAMGMSWSMTMRRVVLPQAVKIVLPPYGNIMIMMLKDSSQASTITVAELA 172 Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395 G I T + + + +YL + + + LF+ L + A K Sbjct: 173 LQGKLIAVSTFKNATVFSLVALMYLVMCVPLILFVRHLEKRSAAK 217 >gi|116254671|ref|YP_770507.1| putative transmembrane ABC transport protein [Rhizobium leguminosarum bv. viciae 3841] gi|115259319|emb|CAK10454.1| putative transmembrane ABC transport protein [Rhizobium leguminosarum bv. viciae 3841] Length = 591 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 41/133 (30%), Positives = 77/133 (57%), Gaps = 3/133 (2%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + ++ L+ +AF AEIVR G+++V GQ+EAA ALGL R+ ++LPQAMRSI+P Sbjct: 165 FAAAFLGLTLNQSAFFAEIVRGGILSVDHGQLEAAAALGLPRRRQAFRIVLPQAMRSILP 224 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL---IWMFIYLSLSIMIA 382 ++ + L K++S+ + +L I + + I +++ +W I +++ + Sbjct: 225 TGFNELIGLAKSTSMVYVLALPELFYTVQVIYRRNLEVIPLLMVATVWYLIIMTVLSIAQ 284 Query: 383 LFMNRLNAKIALK 395 ++ R +K A++ Sbjct: 285 RYIERYFSKGAVR 297 >gi|300313167|ref|YP_003777259.1| amino acid ABC transporter permease [Herbaspirillum seropedicae SmR1] gi|300075952|gb|ADJ65351.1| ABC-type amino acid transport system, permease protein [Herbaspirillum seropedicae SmR1] Length = 216 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 64/205 (31%), Positives = 101/205 (49%), Gaps = 24/205 (11%) Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249 FVF V G V++L+ R+S + + + YI ++ G+P LV++ + Y Sbjct: 27 FVFGGVAGFVIALW--RVSPN---AVLRGIASGYIQ--VVQGIPLLVILFVAY------- 72 Query: 250 VLGQFNF-IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308 F I G ++P ++ I+ + Y AAF+ EI R + AVP+ Q EA+ LG Sbjct: 73 ----FGLAIAGFKLTP-LVAAGISFAIYCAAFLGEIWRGCIQAVPKTQWEASECLGFNRF 127 Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII- 367 + V+LPQA++ PP + ++KN+SLA +GF DL G I N T Q + Sbjct: 128 EQLTKVILPQAVKIATPPTVGFMVQIVKNTSLASVIGFVDLSRAGQIINNSTFQPFTVFG 187 Query: 368 ---LIWMFIYLSLSIMIALFMNRLN 389 LI+ + LS + F +LN Sbjct: 188 CVALIYFCLCFPLSALSKHFERKLN 212 >gi|30019028|ref|NP_830659.1| cystine transport system permease protein [Bacillus cereus ATCC 14579] gi|29894570|gb|AAP07860.1| Cystine transport system permease protein [Bacillus cereus ATCC 14579] Length = 234 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 47/157 (29%), Positives = 92/157 (58%), Gaps = 14/157 (8%) Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244 T + + +F++G++L+ T L+R + + + +Y+S +I G P LV + + + Sbjct: 35 TTIPLTLITFIIGLILATL-TALARISGSRILQWIARIYVS--IIRGTPLLVQL---FII 88 Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304 + P L V P + + + S A+ +EI+R+ ++++P+GQ EAA +G Sbjct: 89 FYGLPTLN-------IEVEP-YTAAVVGFSLNVGAYASEIIRASILSIPKGQWEAAYTIG 140 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341 +T+ +A + V+LPQA R IPPL++ +++L+K++SLA Sbjct: 141 MTYPQALKRVILPQATRVSIPPLSNTFISLVKDTSLA 177 Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust. Identities = 15/41 (36%), Positives = 26/41 (63%) Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 I+ TL R+S ++++ WI R+YV + R P LV +F ++ Sbjct: 49 ILATLTALARISGSRILQWIARIYVSIIRGTPLLVQLFIIF 89 >gi|300904466|ref|ZP_07122312.1| ABC transporter, permease protein [Escherichia coli MS 84-1] gi|301304261|ref|ZP_07210375.1| ABC transporter, permease protein [Escherichia coli MS 124-1] gi|309793851|ref|ZP_07688277.1| ABC transporter, permease protein [Escherichia coli MS 145-7] gi|300403628|gb|EFJ87166.1| ABC transporter, permease protein [Escherichia coli MS 84-1] gi|300840387|gb|EFK68147.1| ABC transporter, permease protein [Escherichia coli MS 124-1] gi|308122808|gb|EFO60070.1| ABC transporter, permease protein [Escherichia coli MS 145-7] gi|315257198|gb|EFU37166.1| ABC transporter, permease protein [Escherichia coli MS 85-1] Length = 347 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 34/76 (44%), Positives = 53/76 (69%) Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335 + +A++AE+VR GL A+P+GQ EAA +L L + K LV+LPQA++ +IP L + + L Sbjct: 221 FQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQGLVILPQALKLVIPGLVNTIIALF 280 Query: 336 KNSSLAVAVGFADLVS 351 K++SL + +G DL S Sbjct: 281 KDTSLVIIIGLFDLFS 296 >gi|300898042|ref|ZP_07116413.1| ABC transporter, permease protein [Escherichia coli MS 198-1] gi|300358261|gb|EFJ74131.1| ABC transporter, permease protein [Escherichia coli MS 198-1] Length = 347 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 75/289 (25%), Positives = 127/289 (43%), Gaps = 51/289 (17%) Query: 63 FLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN 122 F+ ER G + G+ P+ A+L+G V+ I L GR Sbjct: 59 FIHERFG-QFMYGLYPHDQRWRINLALLIGLVS---------IAPMFWKILPNRGR---- 104 Query: 123 KLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLT 182 Y+ V+ I PL+V + +Y L + + R TLT Sbjct: 105 ---------YIAVWAVIYPLIVWWLMYGGFLGLERV-------------ETRQWGGLTLT 142 Query: 183 MDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY 242 + + + GI+L+L R H + L +++I + G+P LI + + Sbjct: 143 LIIASVGIAGALPWGILLAL-----GRRSHMPIVRILSVIFIEFWR--GVP---LITVLF 192 Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302 P+ F+ T + + + + + +A++AE+VR GL A+P+GQ EAA + Sbjct: 193 MSSVMLPL-----FMAEGTSIDKLIRALVGVILFQSAYVAEVVRGGLQALPKGQYEAAES 247 Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 L L + K LV+LPQA++ +IP L + + L K++SL + +G DL S Sbjct: 248 LALGYWKTQGLVILPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFS 296 >gi|298290458|ref|YP_003692397.1| polar amino acid ABC transporter inner membrane subunit [Starkeya novella DSM 506] gi|296926969|gb|ADH87778.1| polar amino acid ABC transporter, inner membrane subunit [Starkeya novella DSM 506] Length = 219 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 38/114 (33%), Positives = 66/114 (57%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P +++ +AL ++AAF+ EI R + +V RGQ EA+ +LG+ + + R V+LPQA+R Sbjct: 84 PAWLAAGLALILWSAAFLTEIWRGCVESVARGQWEASSSLGMGYVQQMRHVILPQALRVA 143 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377 IPP + ++K ++L +GF +L G + N T + ++ + IY L Sbjct: 144 IPPTVGFSVQVVKGTALTSIIGFVELSKAGTVVTNATFEPFKVYGLVALIYFCL 197 >gi|239982700|ref|ZP_04705224.1| glutamate transporter permease [Streptomyces albus J1074] Length = 297 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 53/179 (29%), Positives = 92/179 (51%), Gaps = 24/179 (13%) Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALK 241 T+ A + + LG V + RLS H + +P + F +P L+L+ Sbjct: 70 TLKAAALSMIIALPLGAVFGI--ARLSDHAWVR----IPAGTVVEFF-RAIPVLILMVFA 122 Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLY---IALSCYTAAFIAEIVRSGLIAVPRGQME 298 +L+ +V P+ LY L Y A+ +AEIVR+G++++P GQ E Sbjct: 123 NELY-------------SGSVEPDVRPLYAVVTGLVLYNASVLAEIVRAGILSLPSGQAE 169 Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA-VGFADLVSVGGTI 356 A A+GL + R +LLPQA+ +++P + SQ + ++K+++L A +GF +L+ GT+ Sbjct: 170 AGRAIGLRKSQTMRFILLPQAVTAMLPAIVSQLVVIVKDTALGGAMIGFTELLRSRGTM 228 Score = 39.7 bits (91), Expect = 0.82, Method: Compositional matrix adjust. Identities = 39/134 (29%), Positives = 59/134 (44%), Gaps = 22/134 (16%) Query: 19 LYDM-----RVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEID 73 LYD + N+ V ++ A+ L W V+ + +K +L E A ++ Sbjct: 5 LYDTPGPRAKARNLIVSVVFAVALAAGVWWLVSALG---DKGHL--------EWAKWK-- 51 Query: 74 QGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYV 133 P+T SS+ +L G NT A MI A +G + G RLS + V V Sbjct: 52 ----PFTESSSWTVYLLPGLGNTLKAAALSMIIALPLGAVFGIARLSDHAWVRIPAGTVV 107 Query: 134 EVFRNIPPLVVIFF 147 E FR IP L+++ F Sbjct: 108 EFFRAIPVLILMVF 121 >gi|209693641|ref|YP_002261569.1| putative amino-acid ABC transporter, permease protein [Aliivibrio salmonicida LFI1238] gi|208007592|emb|CAQ77692.1| putative amino-acid ABC transporter, permease protein [Aliivibrio salmonicida LFI1238] Length = 223 Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 50/144 (34%), Positives = 83/144 (57%), Gaps = 12/144 (8%) Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLV-LIALKYQLHFDKPVLGQFNFIGGSTVSPEFM 267 R F L LYIS F G P LV L L Y L P+ F+G F Sbjct: 44 RVFKVPVLDQLSQLYISFFR--GTPLLVQLFLLYYGLPQVFPI-----FVGLDA----FS 92 Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327 + I L+ + AA++AE +R+ +I V R QMEA++++G+T +A R ++LPQA R +P L Sbjct: 93 AAVIGLTLHFAAYMAESIRAAIIGVDRSQMEASLSIGMTTSQAMRRIILPQATRIALPSL 152 Query: 328 TSQYLNLLKNSSLAVAVGFADLVS 351 + +++++K++SLA +G +++++ Sbjct: 153 MNYFIDMIKSTSLAFTLGVSEIMA 176 >gi|209547542|ref|YP_002279460.1| polar amino acid ABC transporter inner membrane protein [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209538786|gb|ACI58720.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 219 Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 37/114 (32%), Positives = 65/114 (57%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P +++ + L+ ++AAF+AEI R + ++ R Q EA+ +LG+ + R V+LPQA+R Sbjct: 84 PAWLAAGLTLTLWSAAFLAEIWRGCVESIARSQWEASASLGMGRLQQMRYVILPQALRVA 143 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377 IPP + ++K ++L +GF +L G + N T Q + + IY +L Sbjct: 144 IPPTVGFSVQIIKGTALTSIIGFVELSKAGTVVTNATFQPFTVYGLVALIYFAL 197 >gi|206975732|ref|ZP_03236644.1| amino acid ABC transporter, permease protein [Bacillus cereus H3081.97] gi|217958459|ref|YP_002337007.1| amino acid ABC transporter, permease protein [Bacillus cereus AH187] gi|218232526|ref|YP_002365642.1| amino acid ABC transporter, permease protein [Bacillus cereus B4264] gi|228938118|ref|ZP_04100738.1| Amino acid ABC transporter [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228970993|ref|ZP_04131630.1| Amino acid ABC transporter [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228977596|ref|ZP_04137988.1| Amino acid ABC transporter [Bacillus thuringiensis Bt407] gi|228984046|ref|ZP_04144235.1| Amino acid ABC transporter [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|229042723|ref|ZP_04190463.1| Amino acid ABC transporter [Bacillus cereus AH676] gi|229108461|ref|ZP_04238078.1| Amino acid ABC transporter [Bacillus cereus Rock1-15] gi|229143577|ref|ZP_04272002.1| Amino acid ABC transporter [Bacillus cereus BDRD-ST24] gi|229149192|ref|ZP_04277433.1| Amino acid ABC transporter [Bacillus cereus m1550] gi|206746194|gb|EDZ57589.1| amino acid ABC transporter, permease protein [Bacillus cereus H3081.97] gi|217067339|gb|ACJ81589.1| amino acid ABC transporter, permease protein [Bacillus cereus AH187] gi|218160483|gb|ACK60475.1| amino acid ABC transporter, permease protein [Bacillus cereus B4264] gi|228634391|gb|EEK90979.1| Amino acid ABC transporter [Bacillus cereus m1550] gi|228639933|gb|EEK96338.1| Amino acid ABC transporter [Bacillus cereus BDRD-ST24] gi|228675088|gb|EEL30315.1| Amino acid ABC transporter [Bacillus cereus Rock1-15] gi|228726663|gb|EEL77880.1| Amino acid ABC transporter [Bacillus cereus AH676] gi|228775726|gb|EEM24103.1| Amino acid ABC transporter [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228782240|gb|EEM30426.1| Amino acid ABC transporter [Bacillus thuringiensis Bt407] gi|228788802|gb|EEM36744.1| Amino acid ABC transporter [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228821603|gb|EEM67608.1| Amino acid ABC transporter [Bacillus thuringiensis serovar berliner ATCC 10792] gi|326938619|gb|AEA14515.1| cystine transport system permease [Bacillus thuringiensis serovar chinensis CT-43] Length = 209 Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 47/157 (29%), Positives = 92/157 (58%), Gaps = 14/157 (8%) Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244 T + + +F++G++L+ T L+R + + + +Y+S +I G P LV + + + Sbjct: 10 TTIPLTLITFIIGLILATL-TALARISGSRILQWIARIYVS--IIRGTPLLVQL---FII 63 Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304 + P L V P + + + S A+ +EI+R+ ++++P+GQ EAA +G Sbjct: 64 FYGLPTLN-------IEVEP-YTAAVVGFSLNVGAYASEIIRASILSIPKGQWEAAYTIG 115 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341 +T+ +A + V+LPQA R IPPL++ +++L+K++SLA Sbjct: 116 MTYPQALKRVILPQATRVSIPPLSNTFISLVKDTSLA 152 Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust. Identities = 15/41 (36%), Positives = 26/41 (63%) Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 I+ TL R+S ++++ WI R+YV + R P LV +F ++ Sbjct: 24 ILATLTALARISGSRILQWIARIYVSIIRGTPLLVQLFIIF 64 >gi|148284121|ref|YP_001248211.1| amino acid ABC transporter permease protein [Orientia tsutsugamushi str. Boryong] gi|146739560|emb|CAM79290.1| amino acid ABC transporter permease protein [Orientia tsutsugamushi str. Boryong] Length = 208 Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 56/180 (31%), Positives = 99/180 (55%), Gaps = 23/180 (12%) Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230 L+N L P +T+ F FV+ ++L++ +R+S++ K G + YIS F Sbjct: 5 LSNIALGIP-VTLQYAFSAVCFGFVIAVLLTV--SRMSKYKLLKFGANI---YISVFR-- 56 Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290 G P ++ + + Y F+F +S F + + S + A++AEI++SG+ Sbjct: 57 GTPLIIQLYVIY-----------FSF----KLSNVFYAGVLVFSLNSGAYVAEIIKSGIN 101 Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 +V + Q+EAA+AL + + + ++LPQA+R IIP L ++ +NLLK SS+ +G DL+ Sbjct: 102 SVDKWQIEAALALNIPYFYIMKDIVLPQALRKIIPSLVNEVINLLKESSIISVLGGMDLM 161 >gi|323178549|gb|EFZ64125.1| general L-amino acid transport system permease protein aapM [Escherichia coli 1180] Length = 347 Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 36/96 (37%), Positives = 60/96 (62%) Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315 F+ T + + + + + +A++AE+VR GL A+P+GQ EAA +L L + K LV+ Sbjct: 201 FMAEGTSIDKLIRALVGVILFQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQGLVI 260 Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 LPQA++ +IP L + + L K++SL + +G DL S Sbjct: 261 LPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFS 296 >gi|242241101|ref|YP_002989282.1| polar amino acid ABC transporter inner membrane subunit [Dickeya dadantii Ech703] gi|242133158|gb|ACS87460.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya dadantii Ech703] Length = 362 Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 40/107 (37%), Positives = 64/107 (59%), Gaps = 8/107 (7%) Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335 + +A++AE+VR GL A+P+GQ EAA AL L + + LV+LPQA++ +IP L + + L Sbjct: 236 FQSAYVAEVVRGGLQALPKGQYEAAQALALGYWRMQGLVILPQALKLVIPGLVNTIIALF 295 Query: 336 KNSSLAVAVGFADLV-SVGGTIINQT-------GQAIEIILIWMFIY 374 K++SL + +G DL S+ ++ T G IL W+F + Sbjct: 296 KDTSLVIIIGLFDLFSSIQQATVDPTWLGMSTEGYVFAAILYWIFCF 342 >gi|323357719|ref|YP_004224115.1| amino acid ABC transporter permease [Microbacterium testaceum StLB037] gi|323274090|dbj|BAJ74235.1| ABC-type amino acid transport system, permease component [Microbacterium testaceum StLB037] Length = 344 Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 51/172 (29%), Positives = 88/172 (51%), Gaps = 12/172 (6%) Query: 232 LPTLVLIALKYQLHFDKPVLG-------QFNFIGGSTVS--PEFMSLYIALSCYTAAFIA 282 +P +V I + Y L + P LG F + TV F + + L + AA+ A Sbjct: 127 VPLVVQIIVWYNLGYLYPTLGLGTPFTTDFWIVEFPTVQLVSAFAAAILGLGLHQAAYSA 186 Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342 EI+R GL++V GQ EAA ALG+ + ++LPQAMRSI+P T++ + L+K +S+ Sbjct: 187 EIIRGGLVSVDPGQHEAAAALGIPASRRLFRIILPQAMRSIVPNATNEVIGLVKGASVVF 246 Query: 343 AVGFADLVSVGGTIINQTGQAIEIIL---IWMFIYLSLSIMIALFMNRLNAK 391 + +L + N+ + I ++L +W I ++ + ++ R A+ Sbjct: 247 VIAIPELFYAVQVVYNRNSRVIPLLLVAVVWYTIITTILSVAQYYIERHYAR 298 >gi|296450403|ref|ZP_06892159.1| L-cystine ABC superfamily ATP binding cassette transporter, membrane protein [Clostridium difficile NAP08] gi|296879474|ref|ZP_06903468.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Clostridium difficile NAP07] gi|296260664|gb|EFH07503.1| L-cystine ABC superfamily ATP binding cassette transporter, membrane protein [Clostridium difficile NAP08] gi|296429620|gb|EFH15473.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Clostridium difficile NAP07] Length = 220 Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 47/160 (29%), Positives = 91/160 (56%), Gaps = 15/160 (9%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 VFS ++G +++L S ++ K + +Y+S F G P L+ + L+F Sbjct: 31 VFSLIIGTIVAL-----SSYYKVKVLNQICKVYVSIFR--GTP---LMPQLFFLYFGLAY 80 Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 + F + P F + I LS A+++E +R+ ++++ +GQ+EAA A+GLT+ + Sbjct: 81 MSDFV----KNMDPVFAT-SIVLSLNMGAYMSETIRASILSIDKGQIEAAYAMGLTNLQT 135 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 + +++PQA+R +P L + +++L+K SS+A VG D++ Sbjct: 136 MKRIVIPQAVRVALPSLFNNFIDLIKGSSVAFVVGVNDIM 175 Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust. Identities = 31/88 (35%), Positives = 45/88 (51%), Gaps = 7/88 (7%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 I+ F T LA S ++ + IIGT+V K++ IC+VYV +FR P + +FFL Sbjct: 15 IMKSFNVTVILAISSLVFSLIIGTIVALSSYYKVKVLNQICKVYVSIFRGTPLMPQLFFL 74 Query: 149 Y-------KSVLSVLPIPDHSIVLPFGM 169 Y V ++ P+ SIVL M Sbjct: 75 YFGLAYMSDFVKNMDPVFATSIVLSLNM 102 >gi|326315079|ref|YP_004232751.1| polar amino acid ABC transporter inner membrane subunit [Acidovorax avenae subsp. avenae ATCC 19860] gi|323371915|gb|ADX44184.1| polar amino acid ABC transporter, inner membrane subunit [Acidovorax avenae subsp. avenae ATCC 19860] Length = 217 Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 39/106 (36%), Positives = 65/106 (61%), Gaps = 1/106 (0%) Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316 + G VSP + + I L+ YT+A++AE+ R + A+PRGQ EA+ +L + + + R V+L Sbjct: 79 MAGFDVSP-WTAAAIGLTLYTSAYLAEVWRGCVQAIPRGQWEASSSLAMGYFQQMRHVVL 137 Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362 PQA+R I P + ++K +++A +GF DL +G + N T Q Sbjct: 138 PQAVRLAIAPTVGFSVQIVKGTAVASIIGFEDLTKLGSMLANATFQ 183 >gi|268318927|ref|YP_003292583.1| hypothetical protein FI9785_433 [Lactobacillus johnsonii FI9785] gi|262397302|emb|CAX66316.1| unnamed protein product [Lactobacillus johnsonii FI9785] Length = 214 Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 59/194 (30%), Positives = 99/194 (51%), Gaps = 17/194 (8%) Query: 186 NAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV-LIALKYQL 244 +IF ++ V+ I L L H K KA+ Y+ ++I G P L+ LI + Y L Sbjct: 19 TTEIFFWTTVVSIPLGLLVA-FGLHSKLKLVKAILKFYV--WIIRGTPLLLQLIFIFYGL 75 Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304 P +G V P + + +A AA+ AEI R GL AVP GQ EAA LG Sbjct: 76 ----PTVG--------IVFPRYEAALVAFIINYAAYFAEIFRGGLQAVPVGQFEAAQVLG 123 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364 L+ + ++ PQ ++ ++P + ++ +NL+K+SSL +G DL+ G + + Sbjct: 124 LSRWQTINRIVRPQVVKIVLPSIGNELINLVKDSSLVYVIGLGDLLRAGNVATARDVSLV 183 Query: 365 EIILIWMFIYLSLS 378 ++L+ +YL+++ Sbjct: 184 PLVLV-GCVYLAMT 196 >gi|83592120|ref|YP_425872.1| amino acid ABC transporter permease [Rhodospirillum rubrum ATCC 11170] gi|83575034|gb|ABC21585.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Rhodospirillum rubrum ATCC 11170] Length = 367 Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 34/76 (44%), Positives = 56/76 (73%) Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335 +TA+++AEI+R+GL A+P GQ EAA +LGL + RLV+LPQA+R +IP + + + +L Sbjct: 242 FTASYLAEIIRAGLQAIPPGQYEAARSLGLGYGLTMRLVVLPQALRLVIPSIVTLAIGIL 301 Query: 336 KNSSLAVAVGFADLVS 351 ++++L +G DL+S Sbjct: 302 QDTTLVAVIGIHDLLS 317 >gi|221196380|ref|ZP_03569427.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia multivorans CGD2M] gi|221203052|ref|ZP_03576071.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia multivorans CGD2] gi|221176986|gb|EEE09414.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia multivorans CGD2] gi|221182934|gb|EEE15334.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia multivorans CGD2M] Length = 593 Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 45/137 (32%), Positives = 79/137 (57%), Gaps = 4/137 (2%) Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321 +SP F + + L+ AAF AE++R G+++V +GQ+EAA ALGL H + T ++LPQAMR Sbjct: 165 ISP-FAAAVLGLTLNHAAFSAEVIRGGILSVDQGQLEAAAALGLPHGRQTARIVLPQAMR 223 Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL---IWMFIYLSLS 378 +I+P + + L K +S+ + +L I + + I +++ +W I L++ Sbjct: 224 AILPTAFNDLIVLAKGTSMVYVLAMPELFYTVQVIYRRNLEVIPLLMVATVWYLIILTVL 283 Query: 379 IMIALFMNRLNAKIALK 395 I + + R A+ AL+ Sbjct: 284 SAIQVQVERHYARGALR 300 >gi|54025808|ref|YP_120050.1| putative glutamate transporter [Nocardia farcinica IFM 10152] gi|54017316|dbj|BAD58686.1| putative glutamate transporter [Nocardia farcinica IFM 10152] Length = 223 Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 38/87 (43%), Positives = 52/87 (59%) Query: 254 FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313 + G S + + LS YTAAF+ E +RSG+ VP GQ EA +LG + + RL Sbjct: 81 WKLAGDSIADNNYRWAIVGLSVYTAAFVCESLRSGINTVPLGQSEAGRSLGFSFSQNLRL 140 Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSL 340 V+LPQA RS+I PL S + L KNS++ Sbjct: 141 VVLPQAFRSVIAPLGSVLIALTKNSTI 167 Score = 40.8 bits (94), Expect = 0.43, Method: Compositional matrix adjust. Identities = 26/74 (35%), Positives = 37/74 (50%) Query: 83 SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142 S Y + IL F T L + A I+GT+V A R+S + W+ YV +FRN P Sbjct: 6 SEYDSQILQAFWVTIKLTLFSAVGALILGTIVAAMRVSPIPVARWLGTAYVTIFRNTPLT 65 Query: 143 VVIFFLYKSVLSVL 156 ++I F + S L Sbjct: 66 LIIVFCSLGLYSAL 79 >gi|330952972|gb|EGH53232.1| polar amino acid ABC transporter, inner membrane subunit [Pseudomonas syringae Cit 7] Length = 215 Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 53/162 (32%), Positives = 89/162 (54%), Gaps = 20/162 (12%) Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249 V V+G+VL+L +R + +YI F G P LV + + ++F Sbjct: 29 LVIGLVVGLVLAL-----ARRSSSAPLRRAASIYIEVFR--GTPALVQL---FIIYFSLT 78 Query: 250 VLG-QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308 +G +F+ F++ I L AA++AEI R+GL AVP+GQ+EAA A+G+ Sbjct: 79 AVGIEFS---------SFIAAIIGLGLNAAAYLAEIYRAGLEAVPKGQVEAAKAIGMPRG 129 Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 + R V+LPQA+R ++ P+ + ++LLK++S+A + DL+ Sbjct: 130 QVMRWVVLPQAIRIVLAPIGNVAISLLKDTSVASLIAAPDLM 171 >gi|325067176|ref|ZP_08125849.1| amino acid ABC transporter membrane protein [Actinomyces oris K20] Length = 291 Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 39/100 (39%), Positives = 65/100 (65%), Gaps = 1/100 (1%) Query: 260 STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319 +T+S +F L + + T+A AE+ RSG+ A+ RGQ EAA ALG++ RL+L PQA Sbjct: 153 ATIS-DFWKLALPIVMCTSATTAEVFRSGVRALDRGQTEAAWALGMSPSLTMRLILAPQA 211 Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359 +R ++P L +Q + ++K ++LA + + +L+ G T+I Q Sbjct: 212 LRLMLPTLITQMVTIIKGTTLAYVLAYPELMYRGSTMIGQ 251 >gi|167749245|ref|ZP_02421372.1| hypothetical protein EUBSIR_00196 [Eubacterium siraeum DSM 15702] gi|167657774|gb|EDS01904.1| hypothetical protein EUBSIR_00196 [Eubacterium siraeum DSM 15702] Length = 233 Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 57/214 (26%), Positives = 108/214 (50%), Gaps = 18/214 (8%) Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTG----KALPLLYISTFLIFGLPTLVLIALKYQL 244 I +F+ +LG ++ F + + + G + LY+ F+I G P LV QL Sbjct: 34 ISLFAVILGFLIGAFVAVVKQLCAGRRGIGWIAKICDLYV--FVIRGTPVLV------QL 85 Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304 VL FN+ G + + + I + A++AEIVR+G+ ++ +GQ EA +LG Sbjct: 86 LLINAVL--FNYRGANAIVAAVLCFGIN----SGAYVAEIVRAGIESIDKGQTEAGRSLG 139 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364 L + L++LPQA+++I+P L ++++ L+K +S+A + D+ + ++T I Sbjct: 140 LGAGQTMWLIVLPQAIKNILPALGNEFIVLVKETSIAGYIAVTDITKAAQYVGSKTYDLI 199 Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 +LI YL L ++ L ++ +++ Sbjct: 200 TPLLIAAAFYLILVFILTKLQKLLERRLGKSDRR 233 >gi|119898556|ref|YP_933769.1| amino acid permease [Azoarcus sp. BH72] gi|119670969|emb|CAL94882.1| conserved hypothetical amino acid permease [Azoarcus sp. BH72] Length = 217 Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 42/133 (31%), Positives = 75/133 (56%), Gaps = 1/133 (0%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G VSP +++ L+ +T+A++AEI R + AVP+GQ EA+ +L L++ + R V+LPQ Sbjct: 81 GIDVSP-WIAAAAGLTLFTSAYLAEIWRGCVEAVPKGQWEASSSLALSYAQQMRHVILPQ 139 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378 A+R + P + ++K +++ +GFA+L G + N T Q + + Y +L Sbjct: 140 ALRIAVAPTVGFSVQVVKGTAVTSIIGFAELTKTGSMLANATFQPFMVFGLVAAGYFALC 199 Query: 379 IMIALFMNRLNAK 391 ++L+ L K Sbjct: 200 YPLSLYAKSLERK 212 >gi|323173470|gb|EFZ59099.1| general L-amino acid transport system permease protein aapM [Escherichia coli LT-68] Length = 347 Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 34/76 (44%), Positives = 53/76 (69%) Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335 + +A++AE+VR GL A+P+GQ EAA +L L + K LV+LPQA++ +IP L + + L Sbjct: 221 FQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQGLVILPQALKLVIPGLVNTIIALF 280 Query: 336 KNSSLAVAVGFADLVS 351 K++SL + +G DL S Sbjct: 281 KDTSLVIIIGLFDLFS 296 >gi|312139901|ref|YP_004007237.1| abc transporter integral membrane subunit [Rhodococcus equi 103S] gi|325674219|ref|ZP_08153908.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Rhodococcus equi ATCC 33707] gi|311889240|emb|CBH48554.1| putative ABC transporter integral membrane subunit [Rhodococcus equi 103S] gi|325554899|gb|EGD24572.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Rhodococcus equi ATCC 33707] Length = 314 Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 38/95 (40%), Positives = 59/95 (62%) Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312 QF + F+ I L+ AA++AEIVR+G+ +V GQ EA+ ALG++ + R Sbjct: 146 QFAHFDIQALEAAFLFAVIGLALNEAAYMAEIVRAGVGSVSEGQTEASTALGMSWAQTMR 205 Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347 +LPQAMR IIPP ++ +++LK +SL AV ++ Sbjct: 206 RTVLPQAMRVIIPPTGNELISMLKTTSLVAAVPYS 240 >gi|167770581|ref|ZP_02442634.1| hypothetical protein ANACOL_01927 [Anaerotruncus colihominis DSM 17241] gi|167667176|gb|EDS11306.1| hypothetical protein ANACOL_01927 [Anaerotruncus colihominis DSM 17241] Length = 218 Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 38/116 (32%), Positives = 69/116 (59%), Gaps = 1/116 (0%) Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 AA+ AEI R GL+A+ RGQ EA LGL+ + T V+LPQ +R +P +T++ + L+K+ Sbjct: 103 AAYFAEIFRGGLLAIDRGQYEACQVLGLSRVQTTVRVILPQMIRVALPSITNESITLIKD 162 Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393 ++L ++ +++ + +TG ++ ++ IYL L+ ++ +F L K A Sbjct: 163 TALVFSIAVLEILYYAKAAVTRTGNVFPYVIAFV-IYLLLNTVLQMFFKWLEKKTA 217 >gi|162448094|ref|YP_001621226.1| ABC transporter substrate-binding and permease [Acholeplasma laidlawii PG-8A] gi|161986201|gb|ABX81850.1| ABC-type transport system, substrate-binding and permease component [Acholeplasma laidlawii PG-8A] Length = 512 Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 40/122 (32%), Positives = 74/122 (60%) Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 TAA+IAEI+R + A+ +GQMEAA +LG + K+ ++ PQA+++ +P + ++++ LK Sbjct: 389 TAAYIAEILRGSMNAIDKGQMEAARSLGFSRVKSLLYIVYPQAIKNALPAIGNEFIVNLK 448 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 ++++ +G DL + ++ T + +I IYL L+ + +L +N L + A KE Sbjct: 449 DTAVLSVIGVLDLFNATRQVVGATYDTVTPFVITAIIYLVLTGVTSLAVNYLENRQAGKE 508 Query: 397 KK 398 K Sbjct: 509 VK 510 >gi|300916767|ref|ZP_07133477.1| ABC transporter, permease protein [Escherichia coli MS 115-1] gi|300415953|gb|EFJ99263.1| ABC transporter, permease protein [Escherichia coli MS 115-1] Length = 347 Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 34/76 (44%), Positives = 53/76 (69%) Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335 + +A++AE+VR GL A+P+GQ EAA +L L + K LV+LPQA++ +IP L + + L Sbjct: 221 FQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQGLVILPQALKLVIPGLVNTIIALF 280 Query: 336 KNSSLAVAVGFADLVS 351 K++SL + +G DL S Sbjct: 281 KDTSLVIIIGLFDLFS 296 >gi|91787283|ref|YP_548235.1| amino acid ABC transporter permease [Polaromonas sp. JS666] gi|91696508|gb|ABE43337.1| amino acid ABC transporter membrane protein 2, PAAT family [Polaromonas sp. JS666] Length = 228 Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 37/87 (42%), Positives = 57/87 (65%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P F + I L + AA++AEI+R GL ++ RGQ EAA+A+GL + V+ PQA+R + Sbjct: 90 PGFWAGIIGLGLHGAAYVAEILRGGLQSIHRGQREAALAVGLAPHQVFMHVVFPQALRVM 149 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLV 350 +PPL + Y+ LLK+SSL + +L+ Sbjct: 150 LPPLLNTYVALLKDSSLCALIATDELM 176 >gi|301022229|ref|ZP_07186144.1| ABC transporter, permease protein [Escherichia coli MS 69-1] gi|300397642|gb|EFJ81180.1| ABC transporter, permease protein [Escherichia coli MS 69-1] Length = 347 Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 34/76 (44%), Positives = 53/76 (69%) Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335 + +A++AE+VR GL A+P+GQ EAA +L L + K LV+LPQA++ +IP L + + L Sbjct: 221 FQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQGLVILPQALKLVIPGLVNTIIALF 280 Query: 336 KNSSLAVAVGFADLVS 351 K++SL + +G DL S Sbjct: 281 KDTSLVIIIGLFDLFS 296 >gi|291454548|ref|ZP_06593938.1| glutamate transporter permease [Streptomyces albus J1074] gi|291357497|gb|EFE84399.1| glutamate transporter permease [Streptomyces albus J1074] Length = 307 Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 53/179 (29%), Positives = 92/179 (51%), Gaps = 24/179 (13%) Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALK 241 T+ A + + LG V + RLS H + +P + F +P L+L+ Sbjct: 80 TLKAAALSMIIALPLGAVFGI--ARLSDHAWVR----IPAGTVVEFF-RAIPVLILMVFA 132 Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLY---IALSCYTAAFIAEIVRSGLIAVPRGQME 298 +L+ +V P+ LY L Y A+ +AEIVR+G++++P GQ E Sbjct: 133 NELY-------------SGSVEPDVRPLYAVVTGLVLYNASVLAEIVRAGILSLPSGQAE 179 Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA-VGFADLVSVGGTI 356 A A+GL + R +LLPQA+ +++P + SQ + ++K+++L A +GF +L+ GT+ Sbjct: 180 AGRAIGLRKSQTMRFILLPQAVTAMLPAIVSQLVVIVKDTALGGAMIGFTELLRSRGTM 238 Score = 39.7 bits (91), Expect = 0.81, Method: Compositional matrix adjust. Identities = 39/134 (29%), Positives = 59/134 (44%), Gaps = 22/134 (16%) Query: 19 LYDM-----RVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEID 73 LYD + N+ V ++ A+ L W V+ + + K +L E A ++ Sbjct: 15 LYDTPGPRAKARNLIVSVVFAVALAAGVWWLVSALGD---KGHL--------EWAKWK-- 61 Query: 74 QGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYV 133 P+T SS+ +L G NT A MI A +G + G RLS + V V Sbjct: 62 ----PFTESSSWTVYLLPGLGNTLKAAALSMIIALPLGAVFGIARLSDHAWVRIPAGTVV 117 Query: 134 EVFRNIPPLVVIFF 147 E FR IP L+++ F Sbjct: 118 EFFRAIPVLILMVF 131 >gi|291086480|ref|ZP_06355922.2| general amino acid ABC transporter, permease protein [Citrobacter youngae ATCC 29220] gi|291067532|gb|EFE05641.1| general amino acid ABC transporter, permease protein [Citrobacter youngae ATCC 29220] Length = 368 Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 34/76 (44%), Positives = 53/76 (69%) Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335 + +A++AE+VR GL A+P+GQ EAA +L L + K LV+LPQA++ +IP L + + L Sbjct: 242 FQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQGLVILPQALKLVIPGLVNTIIALF 301 Query: 336 KNSSLAVAVGFADLVS 351 K++SL + +G DL S Sbjct: 302 KDTSLVIIIGLFDLFS 317 >gi|222094600|ref|YP_002528660.1| amino acid ABC transporter , permease protein [Bacillus cereus Q1] gi|221238658|gb|ACM11368.1| amino acid ABC transporter, permease protein [Bacillus cereus Q1] Length = 235 Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 47/157 (29%), Positives = 92/157 (58%), Gaps = 14/157 (8%) Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244 T + + +F++G++L+ T L+R + + + +Y+S +I G P LV + + + Sbjct: 36 TTIPLTLITFIIGLILATL-TALARISGSRILQWIARIYVS--IIRGTPLLVQL---FII 89 Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304 + P L V P + + + S A+ +EI+R+ ++++P+GQ EAA +G Sbjct: 90 FYGLPTLN-------IEVEP-YTAAVVGFSLNVGAYASEIIRASILSIPKGQWEAAYTIG 141 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341 +T+ +A + V+LPQA R IPPL++ +++L+K++SLA Sbjct: 142 MTYPQALKRVILPQATRVSIPPLSNTFISLVKDTSLA 178 Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust. Identities = 15/41 (36%), Positives = 26/41 (63%) Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 I+ TL R+S ++++ WI R+YV + R P LV +F ++ Sbjct: 50 ILATLTALARISGSRILQWIARIYVSIIRGTPLLVQLFIIF 90 >gi|218662211|ref|ZP_03518141.1| amino acid ABC transporter permease [Rhizobium etli IE4771] Length = 229 Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 41/119 (34%), Positives = 67/119 (56%) Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 AA+ AE++R L+AVP+G++EA A GL+ K TR + LP+A+R +P + + + LK Sbjct: 111 AAYEAEVLRGALLAVPKGELEAGRAFGLSPWKLTRRIWLPRAIRIALPTIAGEIVMQLKA 170 Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 + LA V DL +V + T E +L+ YL+L+ +IA L A + ++ Sbjct: 171 TPLAFTVTVMDLYAVANKVRQDTLLVYEPLLVVTLFYLALTAVIARVFRGLEAHVPVRR 229 >gi|297198788|ref|ZP_06916185.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces sviceus ATCC 29083] gi|197717403|gb|EDY61437.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces sviceus ATCC 29083] Length = 277 Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 71/214 (33%), Positives = 110/214 (51%), Gaps = 35/214 (16%) Query: 190 FVFSFVLGIVLSLFATRLS-----RHFHEKTGKALPLLYISTFLIFGLPTL---VLIALK 241 FV VLG+V++L RLS R F +YI F GLP L + I + Sbjct: 81 FVVGLVLGMVIALM--RLSSVGPYRWFAG--------VYIEIFR--GLPALLIFIFIGVA 128 Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301 L F IGG+ + + +AL AA++AE +R+G+ AVP+GQMEAA Sbjct: 129 VPLAFPGT-----EIIGGT-----YGKVALALGLVAAAYMAETIRAGIQAVPKGQMEAAR 178 Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA----DLVSVGGTII 357 +LG + +A +++PQA R I+PPLT++ + L K+SSL + +G +L G + Sbjct: 179 SLGFSPARAMVSIIIPQAFRIILPPLTNELVLLFKDSSLVLFLGVTLEERELSKYGRDLA 238 Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 + T + IL+ YL ++I + + R+ AK Sbjct: 239 STTANSTP-ILVAGLCYLLVTIPLGFVVRRMEAK 271 Score = 40.4 bits (93), Expect = 0.43, Method: Compositional matrix adjust. Identities = 21/77 (27%), Positives = 37/77 (48%) Query: 81 SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140 +D + I + NT SG + ++G ++ RLS+ W VY+E+FR +P Sbjct: 58 ADQMFPDVITLALKNTVLYTLSGFVVGLVLGMVIALMRLSSVGPYRWFAGVYIEIFRGLP 117 Query: 141 PLVVIFFLYKSVLSVLP 157 L++ F+ +V P Sbjct: 118 ALLIFIFIGVAVPLAFP 134 >gi|254391812|ref|ZP_05007007.1| glutamate transporter permease [Streptomyces clavuligerus ATCC 27064] gi|197705494|gb|EDY51306.1| glutamate transporter permease [Streptomyces clavuligerus ATCC 27064] Length = 302 Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 57/197 (28%), Positives = 103/197 (52%), Gaps = 21/197 (10%) Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265 RLS H + +P+ + F +P L+L+ YQ F+ +T+ + Sbjct: 103 RLSDHAWVR----IPVGAVVEFF-RAIPVLLLMVFAYQ-----------AFVQFTTIESD 146 Query: 266 FMSLY---IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322 F +Y L Y A+ IAEIVR+G++++P GQ +AA A+G+ +A VLLPQA+ + Sbjct: 147 FRPMYAVITGLVLYNASVIAEIVRAGILSLPNGQTDAAKAIGMRKGQAMAHVLLPQAVTA 206 Query: 323 IIPPLTSQYLNLLKNSSLAVA-VGFADLVSVGGTII-NQTGQAIEIILIWMFIYLSLSIM 380 ++P L SQ + ++K+++L A +GF++L+ I N I + + I++ ++ Sbjct: 207 MLPALVSQLVVIVKDTALGGALLGFSELLYQNRAITANYGANTIAALTVIALIFILVNFA 266 Query: 381 IALFMNRLNAKIALKEK 397 + F + L +I +K Sbjct: 267 LTSFASWLEGRIRRGKK 283 Score = 37.0 bits (84), Expect = 5.4, Method: Compositional matrix adjust. Identities = 28/92 (30%), Positives = 47/92 (51%), Gaps = 2/92 (2%) Query: 61 IGFLSERAGFEIDQGIVPYTSDSS-YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRL 119 +G ++ER ++ P+ +D+ + T +L G T A M+ A +G +G GRL Sbjct: 46 LGVMAERDQLASEK-WSPFVTDAKVWTTFLLPGLGETLKAAGISMLIALPLGAALGIGRL 104 Query: 120 SANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151 S + V VE FR IP L+++ F Y++ Sbjct: 105 SDHAWVRIPVGAVVEFFRAIPVLLLMVFAYQA 136 >gi|170696518|ref|ZP_02887642.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia graminis C4D1M] gi|170138565|gb|EDT06769.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia graminis C4D1M] Length = 248 Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 50/163 (30%), Positives = 82/163 (50%), Gaps = 24/163 (14%) Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286 F+ FGLPTL +H D E + +A++ A+ EIVR Sbjct: 75 FVFFGLPTL-------GIHID-----------------EMQAAILAMTVNLGAYAIEIVR 110 Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346 +G+ ++ RGQ++AA ALGL R+ R ++LPQA+ ++ P L SQ L ++ S++ + Sbjct: 111 AGIDSISRGQVQAAQALGLHGRQVFRYIVLPQALANVFPALLSQVLIVMLGSAVVSQISV 170 Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 DL + ++ ++ E LI YL LSI++ +NR Sbjct: 171 PDLTYAANFVQSRNFRSFESYLIITATYLLLSIVLRQIINRFG 213 >gi|146313343|ref|YP_001178417.1| polar amino acid ABC transporter, inner membrane subunit [Enterobacter sp. 638] gi|145320219|gb|ABP62366.1| amino acid ABC transporter membrane protein 2, PAAT family [Enterobacter sp. 638] Length = 367 Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 36/96 (37%), Positives = 60/96 (62%) Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315 F+ T + + + + + +A++AE+VR GL A+P+GQ EAA +L L + K LV+ Sbjct: 221 FMAEGTTIDKLIRALVGVILFQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQGLVI 280 Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 LPQA++ +IP L + + L K++SL + +G DL S Sbjct: 281 LPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFS 316 >gi|325498848|gb|EGC96707.1| amino-acid transporter subunit ; membrane component of ABC superfamily [Escherichia fergusonii ECD227] Length = 347 Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 61/220 (27%), Positives = 106/220 (48%), Gaps = 28/220 (12%) Query: 132 YVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV 191 Y+ V+ I PL+V + +Y L + + R TLT+ + Sbjct: 105 YIAVWAVIYPLIVWWLMYGGFLGLERV-------------ETRQWGGLTLTLIIASVGIA 151 Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251 + GI+L+L R H + L +++I + G+P LI + + P+ Sbjct: 152 GALPWGILLAL-----GRRSHMPIVRILSVIFIEFWR--GVP---LITVLFMSSVMLPL- 200 Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311 F+ T + + + + + +A++AE+VR GL A+P+GQ EAA +L L + K Sbjct: 201 ----FMAEGTSIDKLIRALVGVILFQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQ 256 Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 LV+LPQA++ +IP L + + L K++SL + +G DL S Sbjct: 257 GLVILPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFS 296 >gi|284033027|ref|YP_003382958.1| polar amino acid ABC transporter inner membrane subunit [Kribbella flavida DSM 17836] gi|283812320|gb|ADB34159.1| polar amino acid ABC transporter, inner membrane subunit [Kribbella flavida DSM 17836] Length = 249 Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 45/132 (34%), Positives = 76/132 (57%), Gaps = 7/132 (5%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +ALS AA+I EI RSG+ +V +GQ+EAA ALG + RLV++PQ +R ++P L +Q Sbjct: 106 LALSLIAAAYIGEIFRSGIQSVEKGQLEAARALGFGYSAGMRLVVIPQGVRRVLPALVNQ 165 Query: 331 YLNLLKNSSLAVAVGF----ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386 ++ L+K SSL +G +L +G G ++L +F YL +++ + +N Sbjct: 166 FIALVKESSLVYFLGLLASQRELFRIGQDAAATNGNLSPLLLAGIF-YLIITVPLTHLVN 224 Query: 387 RLNAKIALKEKK 398 + + L+E + Sbjct: 225 WFDKR--LREGR 234 Score = 41.6 bits (96), Expect = 0.21, Method: Compositional matrix adjust. Identities = 21/71 (29%), Positives = 39/71 (54%), Gaps = 3/71 (4%) Query: 91 VGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYK 150 VG VNT LA + ++ T++G +V LS + + W ++Y ++FR +P ++ I + + Sbjct: 27 VGLVNTLILAAASVVLGTVLGMVVAVMGLSRRRWLRWPAKIYTDIFRGLPAILTILLIGQ 86 Query: 151 SVLSVLPIPDH 161 + PI H Sbjct: 87 ---GLSPITRH 94 >gi|78059832|ref|YP_366407.1| ABC amino acid transporter, inner membrane subunit [Burkholderia sp. 383] gi|77964382|gb|ABB05763.1| amino acid ABC transporter membrane protein 1, PAAT family [Burkholderia sp. 383] Length = 254 Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 51/161 (31%), Positives = 86/161 (53%), Gaps = 5/161 (3%) Query: 237 LIALKYQLHFDKPVLGQFNFI-----GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291 L+A +L + P L Q FI G E + +A++ A+ EI+R+G+ + Sbjct: 56 LVAAYVELIRNTPFLVQLFFIFFGLPGIGVHIDEAQAAVLAMTVNLGAYAVEILRAGIES 115 Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 VP GQ++AA ALGL R+ V+LPQA+ ++ P L Q L ++ S++ + DL Sbjct: 116 VPHGQVQAARALGLHGRQVFGHVVLPQALANVYPALLGQVLIVMLGSAVVSQISVPDLTY 175 Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 I ++ +A EI ++ IYL LSI + + +NR+ ++ Sbjct: 176 AANYIQSRNFRAFEIYIVVTAIYLLLSIALRMLLNRVGRRL 216 >gi|327190600|gb|EGE57689.1| amino acid ABC transporter ATP-binding protein [Rhizobium etli CNPAF512] Length = 591 Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 41/133 (30%), Positives = 77/133 (57%), Gaps = 3/133 (2%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + Y+ L+ +AF AEIVR G+++V GQ+EAA ALGL R+ ++LPQAMRSI+P Sbjct: 166 FAAAYLGLTLNQSAFFAEIVRGGILSVDHGQLEAAAALGLPRRRQAFRIVLPQAMRSILP 225 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL---IWMFIYLSLSIMIA 382 ++ + L K++S+ + +L I + + I +++ +W I +++ + Sbjct: 226 TGFNELIGLAKSTSVVYVLALPELFYTVQVIYRRNLEVIPLLMVATVWYLIIMTVLSVAQ 285 Query: 383 LFMNRLNAKIALK 395 ++ R ++ A++ Sbjct: 286 HYIERYFSRGAVR 298 >gi|221210006|ref|ZP_03582987.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia multivorans CGD1] gi|221170694|gb|EEE03160.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia multivorans CGD1] Length = 595 Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 45/137 (32%), Positives = 79/137 (57%), Gaps = 4/137 (2%) Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321 +SP F + + L+ AAF AE++R G+++V +GQ+EAA ALGL H + T ++LPQAMR Sbjct: 167 ISP-FAAAVLGLTLNHAAFSAEVIRGGILSVDQGQLEAAAALGLPHGRQTARIVLPQAMR 225 Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL---IWMFIYLSLS 378 +I+P + + L K +S+ + +L I + + I +++ +W I L++ Sbjct: 226 AILPTAFNDLIVLAKGTSMVYVLAMPELFYTVQVIYRRNLEVIPLLMVATVWYLIILTVL 285 Query: 379 IMIALFMNRLNAKIALK 395 I + + R A+ AL+ Sbjct: 286 SAIQVQVERHYARGALR 302 >gi|302393017|ref|YP_003828837.1| amino acid ABC transporter membrane protein, PAAT family [Acetohalobium arabaticum DSM 5501] gi|302205094|gb|ADL13772.1| amino acid ABC transporter membrane protein, PAAT family [Acetohalobium arabaticum DSM 5501] Length = 222 Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 41/137 (29%), Positives = 79/137 (57%), Gaps = 21/137 (15%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 + PL+ FL FGLP L+ PVL + + G T++ + LS Sbjct: 64 RGTPLITQLFFLYFGLPQLI------------PVLKEAS---GFTIA------IMGLSLN 102 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 + A+++E +R + +V +GQMEAA+++G+T+ +A + ++LPQA R IP L++ ++N++K Sbjct: 103 SGAYMSEAIRGAISSVEKGQMEAALSVGMTYLQAMKRIILPQAARVAIPALSNSFINIIK 162 Query: 337 NSSLAVAVGFADLVSVG 353 ++L +G ++++ Sbjct: 163 GTALTFTIGVTEVMATA 179 >gi|288960220|ref|YP_003450560.1| ABC transporter permease protein [Azospirillum sp. B510] gi|288912528|dbj|BAI74016.1| ABC transporter permease protein [Azospirillum sp. B510] Length = 223 Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 37/103 (35%), Positives = 59/103 (57%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P F + AL +AAF AE+ R G+++V RGQ EA ALG+ + R ++LPQA R + Sbjct: 89 PPFAAALAALGIQSAAFFAEVFRGGILSVERGQWEAGRALGMGRARLMRRIILPQAARRM 148 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 P + L+K ++LA A+ F + + I+ QT + +E+ Sbjct: 149 AAPFVERSFELVKTTTLAAALAFHETIYSAMVIVTQTYRPLEV 191 Score = 46.2 bits (108), Expect = 0.009, Method: Compositional matrix adjust. Identities = 22/64 (34%), Positives = 35/64 (54%) Query: 86 ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145 A +L G T L+F G++ IG ++ A RLS + ++W + E +RN PPLV Sbjct: 14 ADILLAGLGQTLLLSFCGIVAGVAIGGVLAAMRLSGRRSLSWPALAFTEFYRNTPPLVHF 73 Query: 146 FFLY 149 F+ + Sbjct: 74 FWFF 77 >gi|228957269|ref|ZP_04119035.1| Amino acid ABC transporter [Bacillus thuringiensis serovar pakistani str. T13001] gi|228802460|gb|EEM49311.1| Amino acid ABC transporter [Bacillus thuringiensis serovar pakistani str. T13001] Length = 207 Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 47/157 (29%), Positives = 92/157 (58%), Gaps = 14/157 (8%) Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244 T + + +F++G++L+ T L+R + + + +Y+S +I G P LV + + + Sbjct: 8 TTIPLTLITFIIGLILATL-TALARISGSRILQWIARIYVS--IIRGTPLLVQL---FII 61 Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304 + P L V P + + + S A+ +EI+R+ ++++P+GQ EAA +G Sbjct: 62 FYGLPTLN-------IEVEP-YAAAVVGFSLNVGAYASEIIRASILSIPKGQWEAAYTIG 113 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341 +T+ +A + V+LPQA R IPPL++ +++L+K++SLA Sbjct: 114 MTYPQALKRVILPQATRVSIPPLSNTFISLVKDTSLA 150 Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust. Identities = 15/41 (36%), Positives = 26/41 (63%) Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 I+ TL R+S ++++ WI R+YV + R P LV +F ++ Sbjct: 22 ILATLTALARISGSRILQWIARIYVSIIRGTPLLVQLFIIF 62 >gi|156935790|ref|YP_001439706.1| hypothetical protein ESA_03661 [Cronobacter sakazakii ATCC BAA-894] gi|156534044|gb|ABU78870.1| hypothetical protein ESA_03661 [Cronobacter sakazakii ATCC BAA-894] Length = 344 Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 34/76 (44%), Positives = 53/76 (69%) Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335 + +A++AE+VR GL A+P+GQ EAA +L L + K LV+LPQA++ +IP L + + L Sbjct: 218 FQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQGLVILPQALKLVIPGLVNTIIALF 277 Query: 336 KNSSLAVAVGFADLVS 351 K++SL + +G DL S Sbjct: 278 KDTSLVIIIGLFDLFS 293 >gi|330502657|ref|YP_004379526.1| polar amino acid ABC transporter inner membrane subunit [Pseudomonas mendocina NK-01] gi|328916943|gb|AEB57774.1| polar amino acid ABC transporter, inner membrane subunit [Pseudomonas mendocina NK-01] Length = 232 Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 52/167 (31%), Positives = 90/167 (53%), Gaps = 11/167 (6%) Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL----YIALSCYTA 278 ++ T++I G P LV + Y L++ L QF + + + P S +A + T+ Sbjct: 56 WLYTYVIRGTPMLVQL---YLLYYG---LAQFEAVRETFMWPYLSSATFCACLAFAINTS 109 Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338 A+ AEI+ L A P G++EAA A+G++ RK + +LLP A+R +P +++ + +L + Sbjct: 110 AYTAEILAGSLKATPPGEIEAAKAMGMSRRKLYQRILLPSALRRALPQYSNEVIMMLHTT 169 Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS-IMIALF 384 SLA AV D+ T+ +Q E + YL+L+ I++ LF Sbjct: 170 SLASAVTLVDITGAAKTLSSQYYMPFEAYVTAGLFYLALTFILVRLF 216 >gi|253582767|ref|ZP_04859987.1| amino acid ABC transporter permease [Fusobacterium varium ATCC 27725] gi|251835343|gb|EES63884.1| amino acid ABC transporter permease [Fusobacterium varium ATCC 27725] Length = 208 Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 57/212 (26%), Positives = 113/212 (53%), Gaps = 19/212 (8%) Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240 LT++ +FS LGI+LSL R+S++ ++ + T++ G P L+ + Sbjct: 14 LTVNLYVVTMLFSLPLGILLSL--GRVSKNTTLSN-----IIQVYTWIFRGTPLLLQL-- 64 Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300 + +++ PV+G T+SP F + + A+ EI R ++ + GQ EAA Sbjct: 65 -FFVYYGLPVVG-------ITLSP-FAAASLTFVINYTAYFCEIFRGSILGIDPGQYEAA 115 Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 LG+ + + +++PQA+ + +PPL+++ ++L+K++SL A+G A+++ ++ + Sbjct: 116 KVLGMKYWQTMIRIIIPQALITALPPLSNEAISLIKDTSLVSAIGMAEILRNSRELVTR- 174 Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 +I I IYL LS ++ LF ++ K+ Sbjct: 175 DFSITPFFICAVIYLGLSTIVVLFFKKMEKKV 206 >gi|149913101|ref|ZP_01901635.1| hypothetical protein RAZWK3B_03895 [Roseobacter sp. AzwK-3b] gi|149813507|gb|EDM73333.1| hypothetical protein RAZWK3B_03895 [Roseobacter sp. AzwK-3b] Length = 428 Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 36/91 (39%), Positives = 61/91 (67%), Gaps = 1/91 (1%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I ++ + +A+IAE++R GL A+PRGQ EAA +LGL + ++ RL++LPQA++ IP + + Sbjct: 298 IMITMFASAYIAEVIRGGLAALPRGQYEAADSLGLDYAQSMRLIILPQALKISIPGIVNV 357 Query: 331 YLNLLKNSSLAVAVGFADLVS-VGGTIINQT 360 + L K+++L + DLV + G I+ T Sbjct: 358 SVGLFKDTTLVSVISMFDLVGMIRGPILAAT 388 >gi|300946950|ref|ZP_07161181.1| ABC transporter, permease protein [Escherichia coli MS 116-1] gi|300958248|ref|ZP_07170395.1| ABC transporter, permease protein [Escherichia coli MS 175-1] gi|300315066|gb|EFJ64850.1| ABC transporter, permease protein [Escherichia coli MS 175-1] gi|300453410|gb|EFK17030.1| ABC transporter, permease protein [Escherichia coli MS 116-1] Length = 347 Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 34/76 (44%), Positives = 53/76 (69%) Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335 + +A++AE+VR GL A+P+GQ EAA +L L + K LV+LPQA++ +IP L + + L Sbjct: 221 FQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQGLVILPQALKLVIPGLVNTIIALF 280 Query: 336 KNSSLAVAVGFADLVS 351 K++SL + +G DL S Sbjct: 281 KDTSLVIIIGLFDLFS 296 >gi|153953343|ref|YP_001394108.1| amino acid ABC transporter permease [Clostridium kluyveri DSM 555] gi|146346224|gb|EDK32760.1| Predicted amino acid ABC transporter, permease protein [Clostridium kluyveri DSM 555] Length = 212 Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 37/125 (29%), Positives = 76/125 (60%), Gaps = 1/125 (0%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +A + AA++AEI R+G+ ++ RGQ EAA ALG+ + + +++PQA+R+++P + ++ Sbjct: 89 LAFTINYAAYLAEIFRAGIESIDRGQFEAAKALGMNYYETITKIIIPQAIRNVLPAVCNE 148 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 +NL+K+S+L +G DL+ ++ + I I +YL ++ ++ + +L Sbjct: 149 SINLVKDSALVATIGVGDLLRAAKEVVTRD-FTITPFFIAAALYLLITSVLVMGFRQLEK 207 Query: 391 KIALK 395 K ++K Sbjct: 208 KYSVK 212 >gi|311108044|ref|YP_003980897.1| amino ABC transporter permease, 3-TM region, His/Glu/Gln/Arg/opine family domain-containing protein 16 [Achromobacter xylosoxidans A8] gi|310762733|gb|ADP18182.1| amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family domain protein 16 [Achromobacter xylosoxidans A8] Length = 222 Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 42/114 (36%), Positives = 68/114 (59%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P F++ +ALS Y A+ EI+R+GL ++PR Q+EA LGL+ + R ++L A+R++ Sbjct: 87 PPFVAAALALSLYFGAYAIEILRAGLDSIPRSQIEAGHCLGLSTWQVYRHIVLAPALRNV 146 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377 P L +Q + LL +SLA V DL G I ++T ++ E+ + IY +L Sbjct: 147 YPALGTQLVILLLGTSLASQVSAEDLFHAGSFIESRTYRSFEVYAVICGIYFTL 200 >gi|301647046|ref|ZP_07246878.1| ABC transporter, permease protein [Escherichia coli MS 146-1] gi|301074796|gb|EFK89602.1| ABC transporter, permease protein [Escherichia coli MS 146-1] Length = 347 Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 34/76 (44%), Positives = 53/76 (69%) Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335 + +A++AE+VR GL A+P+GQ EAA +L L + K LV+LPQA++ +IP L + + L Sbjct: 221 FQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQGLVILPQALKLVIPGLVNTIIALF 280 Query: 336 KNSSLAVAVGFADLVS 351 K++SL + +G DL S Sbjct: 281 KDTSLVIIIGLFDLFS 296 >gi|262202138|ref|YP_003273346.1| polar amino acid ABC transporter inner membrane subunit [Gordonia bronchialis DSM 43247] gi|262085485|gb|ACY21453.1| polar amino acid ABC transporter, inner membrane subunit [Gordonia bronchialis DSM 43247] Length = 223 Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 35/73 (47%), Positives = 51/73 (69%) Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335 YTA F+ E +RSG VP GQ EAA +LGL+ + +++LPQA+RS+I PL S + L Sbjct: 102 YTATFVCETLRSGFNTVPIGQAEAARSLGLSFTQVFGIIVLPQAIRSVIGPLGSVLIALT 161 Query: 336 KNSSLAVAVGFAD 348 KN+++A A+G A+ Sbjct: 162 KNTTIASAIGVAE 174 >gi|168752392|ref|ZP_02777414.1| general L-amino acid transport system permease protein AapM [Escherichia coli O157:H7 str. EC4113] gi|168758502|ref|ZP_02783509.1| general L-amino acid transport system permease protein AapM [Escherichia coli O157:H7 str. EC4401] gi|168769136|ref|ZP_02794143.1| general L-amino acid transport system permease protein AapM [Escherichia coli O157:H7 str. EC4486] gi|168783841|ref|ZP_02808848.1| general L-amino acid transport system permease protein AapM [Escherichia coli O157:H7 str. EC4076] gi|187776437|ref|ZP_02802695.2| general L-amino acid transport system permease protein AapM [Escherichia coli O157:H7 str. EC4196] gi|195940014|ref|ZP_03085396.1| putative transport system permease protein [Escherichia coli O157:H7 str. EC4024] gi|208807701|ref|ZP_03250038.1| general L-amino acid transport system permease protein AapM [Escherichia coli O157:H7 str. EC4206] gi|208814609|ref|ZP_03255938.1| general L-amino acid transport system permease protein AapM [Escherichia coli O157:H7 str. EC4045] gi|208819421|ref|ZP_03259741.1| general L-amino acid transport system permease protein AapM [Escherichia coli O157:H7 str. EC4042] gi|209398401|ref|YP_002272732.1| general L-amino acid transport system permease protein AapM [Escherichia coli O157:H7 str. EC4115] gi|254795212|ref|YP_003080049.1| putative amino-acid ABC transporter membrane protein [Escherichia coli O157:H7 str. TW14359] gi|187767132|gb|EDU30976.1| general L-amino acid transport system permease protein AapM [Escherichia coli O157:H7 str. EC4196] gi|188013749|gb|EDU51871.1| general L-amino acid transport system permease protein AapM [Escherichia coli O157:H7 str. EC4113] gi|188998879|gb|EDU67865.1| general L-amino acid transport system permease protein AapM [Escherichia coli O157:H7 str. EC4076] gi|189354675|gb|EDU73094.1| general L-amino acid transport system permease protein AapM [Escherichia coli O157:H7 str. EC4401] gi|189361796|gb|EDU80215.1| general L-amino acid transport system permease protein AapM [Escherichia coli O157:H7 str. EC4486] gi|208727502|gb|EDZ77103.1| general L-amino acid transport system permease protein AapM [Escherichia coli O157:H7 str. EC4206] gi|208735886|gb|EDZ84573.1| general L-amino acid transport system permease protein AapM [Escherichia coli O157:H7 str. EC4045] gi|208739544|gb|EDZ87226.1| general L-amino acid transport system permease protein AapM [Escherichia coli O157:H7 str. EC4042] gi|209159801|gb|ACI37234.1| general L-amino acid transport system permease protein AapM [Escherichia coli O157:H7 str. EC4115] gi|254594612|gb|ACT73973.1| predicted amino-acid transporter subunit, membrane component of ABC superfamily [Escherichia coli O157:H7 str. TW14359] Length = 362 Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 36/96 (37%), Positives = 60/96 (62%) Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315 F+ T + + + + + +A++AE+VR GL A+P+GQ EAA +L L + K LV+ Sbjct: 221 FMAEGTSIDKLLRALVGVILFQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQGLVI 280 Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 LPQA++ +IP L + + L K++SL + +G DL S Sbjct: 281 LPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFS 316 >gi|85058513|ref|YP_454215.1| amino-acid ABC transporter permease component [Sodalis glossinidius str. 'morsitans'] gi|84779033|dbj|BAE73810.1| amino-acid ABC transporter permease component [Sodalis glossinidius str. 'morsitans'] Length = 219 Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 55/197 (27%), Positives = 99/197 (50%), Gaps = 14/197 (7%) Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252 SFV G+VL F L R + + K + Y+ ++I G P LV + L + Sbjct: 30 SFVGGLVLG-FLVALVRLYGPQPLKGIADFYV--WVIRGTPLLVQLFLIF---------- 76 Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312 + F + I + A+ +EI+R +++VP+ Q EAA A+G+ +A R Sbjct: 77 -YGLPSAGVTLDAFPAALIGFTLSVGAYGSEIIRGAIVSVPKAQWEAAWAIGMNSTQAMR 135 Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372 V+LPQ++ IPPL + +++L+K++SLA + ++ I++ T + + + + Sbjct: 136 RVILPQSVFVSIPPLANSFISLIKDTSLAAVITVPEMFLAAQRIVSVTYEPLILYIEAAA 195 Query: 373 IYLSLSIMIALFMNRLN 389 IYL S +++ NRL Sbjct: 196 IYLLFSTVLSKVQNRLE 212 >gi|33601772|ref|NP_889332.1| putative ABC transporter permease protein [Bordetella bronchiseptica RB50] gi|33576209|emb|CAE33288.1| putative ABC transporter permease protein [Bordetella bronchiseptica RB50] Length = 217 Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 35/134 (26%), Positives = 77/134 (57%), Gaps = 1/134 (0%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P+F + +A + AA+ AEI R+G+ +V RGQ E + LG+T+ + R ++LPQ ++ + Sbjct: 85 PDFPAAVVAFALNYAAYFAEIFRAGIQSVDRGQYEGSKVLGMTYLQTMRRIVLPQMVQRV 144 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 +PP++++ + L+K++SL + D++ I+ + ++ F YL +++++ Sbjct: 145 LPPMSNETITLVKDTSLIYVLALNDILRTARGIVQRDFTTTPFLVAAAF-YLIMTLILTW 203 Query: 384 FMNRLNAKIALKEK 397 F + + A ++ Sbjct: 204 FFQHMEKRYAKYDQ 217 >gi|312868947|ref|ZP_07729127.1| ABC transporter, permease protein [Lactobacillus oris PB013-T2-3] gi|311095511|gb|EFQ53775.1| ABC transporter, permease protein [Lactobacillus oris PB013-T2-3] Length = 488 Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 50/140 (35%), Positives = 76/140 (54%), Gaps = 13/140 (9%) Query: 224 ISTFLIF---GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280 IS+ +I+ GLP +VL Y +G N IG P F++ + L A+ Sbjct: 326 ISSTIIYIFRGLPMIVLAFFIY--------MGLPNVIGHKV--PLFLAGVVTLMLDEGAY 375 Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340 I IV+ G AV GQ EAA +LGL +RKA V+ PQ ++ ++P L +Q++ LK++S+ Sbjct: 376 IGAIVKGGFDAVDPGQWEAARSLGLPYRKALVKVVAPQGIKIMVPSLVNQFIITLKDTSI 435 Query: 341 AVAVGFADLVSVGGTIINQT 360 A+G +L G II+Q Sbjct: 436 LSAIGVMELTQTGTVIISQN 455 >gi|300928694|ref|ZP_07144212.1| ABC transporter, permease protein [Escherichia coli MS 187-1] gi|300463283|gb|EFK26776.1| ABC transporter, permease protein [Escherichia coli MS 187-1] Length = 347 Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 34/76 (44%), Positives = 53/76 (69%) Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335 + +A++AE+VR GL A+P+GQ EAA +L L + K LV+LPQA++ +IP L + + L Sbjct: 221 FQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQGLVILPQALKLVIPGLVNTIIALF 280 Query: 336 KNSSLAVAVGFADLVS 351 K++SL + +G DL S Sbjct: 281 KDTSLVIIIGLFDLFS 296 >gi|258405468|ref|YP_003198210.1| polar amino acid ABC transporter, inner membrane subunit [Desulfohalobium retbaense DSM 5692] gi|257797695|gb|ACV68632.1| polar amino acid ABC transporter, inner membrane subunit [Desulfohalobium retbaense DSM 5692] Length = 267 Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 42/123 (34%), Positives = 71/123 (57%), Gaps = 12/123 (9%) Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290 G+P LV QL + LG F + P F + IA++ A++ EI R+G+ Sbjct: 113 GIPLLV------QLFYIYYALGSFMQV------PPFFAAIIAMTVCYGAYMGEIFRAGIE 160 Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 ++ GQ EAA +LG + + V++PQAMR+I+PP+ ++++ LLK++SL + +DL+ Sbjct: 161 SIDYGQTEAARSLGFSRGQTMFYVIIPQAMRTILPPVGNEFIALLKDTSLVSIIAVSDLL 220 Query: 351 SVG 353 G Sbjct: 221 RRG 223 Score = 40.4 bits (93), Expect = 0.47, Method: Compositional matrix adjust. Identities = 22/68 (32%), Positives = 38/68 (55%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151 G + TF + + + ++G + G GR+S +V YVEV R IP LV +F++Y + Sbjct: 67 GILVTFEVTMLAIFLSLVVGLIAGLGRISRIPIVNLTASTYVEVVRGIPLLVQLFYIYYA 126 Query: 152 VLSVLPIP 159 + S + +P Sbjct: 127 LGSFMQVP 134 >gi|255617479|ref|XP_002539845.1| Nopaline transport system permease protein nocM, putative [Ricinus communis] gi|223501793|gb|EEF22538.1| Nopaline transport system permease protein nocM, putative [Ricinus communis] Length = 217 Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 46/136 (33%), Positives = 74/136 (54%), Gaps = 1/136 (0%) Query: 260 STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319 ++SP F S + L TAA + EI R + AVP GQ EAA ALGL + VL+PQ Sbjct: 80 GSLSP-FTSAVVGLGIITAANLCEIYRGAMKAVPVGQYEAAHALGLPTVRRYLDVLVPQI 138 Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379 R +P L + + LLK++++A +G DL + +T + IE+ ++ +Y +SI Sbjct: 139 FRVSLPALATYAIGLLKDTAVASTIGVPDLALSANRVAQETFKGIEVYAVFGLVYFLISI 198 Query: 380 MIALFMNRLNAKIALK 395 IA L+ ++ ++ Sbjct: 199 AIAFATRGLDRRLRVR 214 >gi|169351674|ref|ZP_02868612.1| hypothetical protein CLOSPI_02455 [Clostridium spiroforme DSM 1552] gi|169291896|gb|EDS74029.1| hypothetical protein CLOSPI_02455 [Clostridium spiroforme DSM 1552] Length = 238 Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 50/163 (30%), Positives = 83/163 (50%), Gaps = 12/163 (7%) Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290 G P LV Y L KP+LG G + +S T A++AEI+RSG+ Sbjct: 80 GTPMLVQAMFLYYLL--KPILGWTGITAGLVI----------ISINTGAYMAEIIRSGIQ 127 Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 +V GQ EAA ++G++ + R ++LPQA+++ P + +Q + +K+SS+ + ++ Sbjct: 128 SVDIGQTEAAKSIGMSTVQTFRKIVLPQAIKNSFPSIGNQLIINIKDSSMLNVISVTEVY 187 Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393 +I T Q E I M IYL L+ + +L MN ++ Sbjct: 188 FQSTSIAGSTYQYTETFFITMIIYLILTTIASLIMNYFERRMC 230 >gi|161520734|ref|YP_001584161.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia multivorans ATCC 17616] gi|189353081|ref|YP_001948708.1| polar amino acid transport system ATP-binding protein [Burkholderia multivorans ATCC 17616] gi|160344784|gb|ABX17869.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia multivorans ATCC 17616] gi|189337103|dbj|BAG46172.1| polar amino acid transport system ATP-binding protein [Burkholderia multivorans ATCC 17616] Length = 595 Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 45/137 (32%), Positives = 79/137 (57%), Gaps = 4/137 (2%) Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321 +SP F + + L+ AAF AE++R G+++V +GQ+EAA ALGL H + T ++LPQAMR Sbjct: 167 ISP-FAAAVLGLTLNHAAFSAEVIRGGILSVDQGQLEAAAALGLPHGRQTARIVLPQAMR 225 Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL---IWMFIYLSLS 378 +I+P + + L K +S+ + +L I + + I +++ +W I L++ Sbjct: 226 AILPTAFNDLIVLAKGTSMVYVLAMPELFYTVQVIYRRNLEVIPLLMVATVWYLIILTVL 285 Query: 379 IMIALFMNRLNAKIALK 395 I + + R A+ AL+ Sbjct: 286 SAIQVQVERHYARGALR 302 >gi|15965624|ref|NP_385977.1| amino acid ABC transporter permease [Sinorhizobium meliloti 1021] gi|307314028|ref|ZP_07593641.1| polar amino acid ABC transporter, inner membrane subunit [Sinorhizobium meliloti BL225C] gi|307321205|ref|ZP_07600607.1| polar amino acid ABC transporter, inner membrane subunit [Sinorhizobium meliloti AK83] gi|15074805|emb|CAC46450.1| Amino acid transport system permease [Sinorhizobium meliloti 1021] gi|306893107|gb|EFN23891.1| polar amino acid ABC transporter, inner membrane subunit [Sinorhizobium meliloti AK83] gi|306899150|gb|EFN29789.1| polar amino acid ABC transporter, inner membrane subunit [Sinorhizobium meliloti BL225C] Length = 267 Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 59/206 (28%), Positives = 105/206 (50%), Gaps = 6/206 (2%) Query: 186 NAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV-LIALKYQL 244 A + V + +G+V+ F L++ EK+ + +Y + F GLP L+ L + Y L Sbjct: 56 TASLAVATLPVGLVIGFFVA-LAKQSEEKSLRLAGNIYTTIFR--GLPELLTLFIVYYGL 112 Query: 245 H-FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 + L + G ++ F++ IAL +A+ +E++ S A+P GQ EA AL Sbjct: 113 QILVQQFLATVGYEGAVEINA-FVAGMIALGVVFSAYCSEVLLSAFKAIPHGQYEAGDAL 171 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363 GL K RL++LPQ +R +P L + ++ LLK+++L +G D++ G T A Sbjct: 172 GLHRGKTMRLIILPQLIRIALPGLGNLWMALLKDTALVSVIGLPDILRQTGIAARVTKHA 231 Query: 364 IEIILIWMFIYLSLSIMIALFMNRLN 389 E I ++L L+++ ++ + L Sbjct: 232 FEFFGIACVLFLVLAMISSVVFSALE 257 >gi|330446186|ref|ZP_08309838.1| amino ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328490377|dbj|GAA04335.1| amino ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 220 Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 43/135 (31%), Positives = 79/135 (58%), Gaps = 1/135 (0%) Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321 +SP F+S IALS A++ A+ +R + AVP+GQ EAA ALG++ + +++PQA+R Sbjct: 72 ISP-FLSGVIALSLIFASYAAQTIRGAIRAVPKGQREAASALGISKSRTFFAIIVPQAVR 130 Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 +P LT+Q+L LLK+++L +G DL+ T ++ +YL ++++ Sbjct: 131 HALPGLTNQWLVLLKDTALVSLIGVTDLLKQAQLTSAATHESFTWYATAAGVYLVITLIT 190 Query: 382 ALFMNRLNAKIALKE 396 + ++AK + ++ Sbjct: 191 QKIIKIIDAKYSAQD 205 Score = 38.1 bits (87), Expect = 2.5, Method: Compositional matrix adjust. Identities = 17/54 (31%), Positives = 30/54 (55%) Query: 96 TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 T LAF+ ++ ++ L G +S +LVAW V V R +P L+++ F++ Sbjct: 2 TVQLAFTSLVVGLVLAMLFAGGEMSRFRLVAWPTTALVTVLRGLPELLIVLFIF 55 >gi|300937397|ref|ZP_07152232.1| ABC transporter, permease protein [Escherichia coli MS 21-1] gi|300979703|ref|ZP_07174653.1| ABC transporter, permease protein [Escherichia coli MS 200-1] gi|300307921|gb|EFJ62441.1| ABC transporter, permease protein [Escherichia coli MS 200-1] gi|300457571|gb|EFK21064.1| ABC transporter, permease protein [Escherichia coli MS 21-1] gi|324015880|gb|EGB85099.1| ABC transporter, permease protein [Escherichia coli MS 60-1] Length = 347 Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 34/76 (44%), Positives = 53/76 (69%) Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335 + +A++AE+VR GL A+P+GQ EAA +L L + K LV+LPQA++ +IP L + + L Sbjct: 221 FQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQGLVILPQALKLVIPGLVNTIIALF 280 Query: 336 KNSSLAVAVGFADLVS 351 K++SL + +G DL S Sbjct: 281 KDTSLVIIIGLFDLFS 296 >gi|42518507|ref|NP_964437.1| ABC transporter permease component [Lactobacillus johnsonii NCC 533] gi|41582792|gb|AAS08403.1| ABC transporter permease component [Lactobacillus johnsonii NCC 533] gi|329666777|gb|AEB92725.1| ABC transporter permease component [Lactobacillus johnsonii DPC 6026] Length = 214 Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 59/192 (30%), Positives = 99/192 (51%), Gaps = 17/192 (8%) Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV-LIALKYQLHF 246 +IF ++ V+ I L L H K KA+ Y+ ++I G P L+ LI + Y L Sbjct: 21 EIFFWTTVVSIPLGLLVA-FGLHSKLKLVKAILKFYV--WIIRGTPLLLQLIFIFYGL-- 75 Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306 P +G V P + + +A AA+ AEI R GL AVP GQ EAA LGL+ Sbjct: 76 --PTVG--------IVFPRYEAALVAFIINYAAYFAEIFRGGLQAVPVGQFEAAQVLGLS 125 Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 + ++ PQ ++ ++P + ++ +NL+K+SSL +G DL+ G + + + Sbjct: 126 RWQTINRIVRPQVVKIVLPSIGNELINLVKDSSLVYVIGLGDLLRAGNVATARDVSLVPL 185 Query: 367 ILIWMFIYLSLS 378 +L+ +YL+++ Sbjct: 186 VLV-GCVYLAMT 196 >gi|158423211|ref|YP_001524503.1| amino acid ABC transporter permease protein [Azorhizobium caulinodans ORS 571] gi|158330100|dbj|BAF87585.1| amino acid ABC transporter permease protein [Azorhizobium caulinodans ORS 571] Length = 466 Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 55/165 (33%), Positives = 91/165 (55%), Gaps = 25/165 (15%) Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF----GLPTL-VLIALKYQLHFD 247 S LGI+L+L R S+ +PL++I++ L G+P + VL Y L Sbjct: 271 SLPLGILLAL--GRRSK---------MPLMHIASTLFIEFWRGVPLVTVLFFATYMLPLF 319 Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307 P G+F G + + ++ + +A++AE+VR GL A+P+GQ E A+ALGL Sbjct: 320 LP--GRFTIDG-------LLRALVGVALFASAYMAEVVRGGLQAIPKGQYEGAMALGLPG 370 Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352 RLV+LPQA++ +IP + + ++ L K+++L + V DL+ V Sbjct: 371 TLMMRLVVLPQALKLVIPGIVNTFIALFKDTTLVLIVSIFDLLGV 415 >gi|134102290|ref|YP_001107951.1| ABC transporter, nucleotide binding/ATPase protein [Saccharopolyspora erythraea NRRL 2338] gi|133914913|emb|CAM05026.1| ABC transporter, nucleotide binding/ATPase protein [Saccharopolyspora erythraea NRRL 2338] Length = 780 Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 58/168 (34%), Positives = 93/168 (55%), Gaps = 23/168 (13%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 ++LPLL + F I+ LP ++ +L +PVLG SP F+ +AL Sbjct: 339 RSLPLLVLLIF-IYNLPQVI-----PEL---RPVLG----------SP-FVVGLVALVLS 378 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 A+IAEI R GL +V GQ EAA ALG+ + RLV++PQA R +P L +Q++ +LK Sbjct: 379 ETAYIAEIHRGGLKSVSVGQGEAARALGIPYGGVQRLVVIPQAFRVALPALGNQFITILK 438 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 +SL ++ A+++ VG + Q + +E +L Y+ +++ LF Sbjct: 439 LTSLVSSISLAEILLVGQRLYTQNFKVLETLLAVSIFYV---VLVTLF 483 >gi|91212701|ref|YP_542687.1| putative transport system permease [Escherichia coli UTI89] gi|237705971|ref|ZP_04536452.1| amino acid ABC transporter permease [Escherichia sp. 3_2_53FAA] gi|91074275|gb|ABE09156.1| putative transport system permease protein [Escherichia coli UTI89] gi|226899011|gb|EEH85270.1| amino acid ABC transporter permease [Escherichia sp. 3_2_53FAA] Length = 368 Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 63/220 (28%), Positives = 107/220 (48%), Gaps = 28/220 (12%) Query: 132 YVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV 191 Y+ V+ I PLVV + +Y L + D + R TLT+ + Sbjct: 126 YIAVWAVIYPLVVWWLMYGGFLGL----DR---------VETRQWGGLTLTLIIASVGIA 172 Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251 + GI+L+L R H + L +++I + G+P LI + + P+ Sbjct: 173 GALPWGILLAL-----GRRSHMPIVRILSVIFIEFWR--GVP---LITVLFMSSVMLPL- 221 Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311 F+ T + + + + + +A++AE+VR GL A+P+GQ EAA +L L + K Sbjct: 222 ----FMAEGTSIDKLIRALVGVILFQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQ 277 Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 LV+LPQA++ +IP L + + L K++SL + +G DL S Sbjct: 278 GLVILPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFS 317 >gi|227888781|ref|ZP_04006586.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus johnsonii ATCC 33200] gi|227850618|gb|EEJ60704.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus johnsonii ATCC 33200] Length = 224 Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 59/192 (30%), Positives = 99/192 (51%), Gaps = 17/192 (8%) Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV-LIALKYQLHF 246 +IF ++ V+ I L L H K KA+ Y+ ++I G P L+ LI + Y L Sbjct: 31 EIFFWTTVVSIPLGLLVA-FGLHSKLKLVKAILKFYV--WIIRGTPLLLQLIFIFYGL-- 85 Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306 P +G V P + + +A AA+ AEI R GL AVP GQ EAA LGL+ Sbjct: 86 --PTVG--------IVFPRYEAALVAFIINYAAYFAEIFRGGLQAVPVGQFEAAQVLGLS 135 Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 + ++ PQ ++ ++P + ++ +NL+K+SSL +G DL+ G + + + Sbjct: 136 RWQTINRIVRPQVVKIVLPSIGNELINLVKDSSLVYVIGLGDLLRAGNVATARDVSLVPL 195 Query: 367 ILIWMFIYLSLS 378 +L+ +YL+++ Sbjct: 196 VLVGC-VYLAMT 206 >gi|222086234|ref|YP_002544766.1| amino acid ABC transporter [Agrobacterium radiobacter K84] gi|221723682|gb|ACM26838.1| amino acid ABC transporter [Agrobacterium radiobacter K84] Length = 267 Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 51/173 (29%), Positives = 91/173 (52%), Gaps = 12/173 (6%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 + LP L + +G+ L+ L Y + ++ PV + N F++ IALS Sbjct: 97 RGLPELLTLFIIYYGMQILLQTVLAY-VGYEGPV--EIN---------AFVAGMIALSIV 144 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 +A+ +E++ S A+P+GQ EA ALG + RL++LPQ +R +P L + ++NLLK Sbjct: 145 FSAYCSEVLLSAFRAIPKGQYEAGDALGFHRVRTMRLIILPQLIRISLPNLGNLWMNLLK 204 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 ++S +G AD+V G + T + + +YL L+I+ + ++ L+ Sbjct: 205 DTSYVSIIGLADIVRQTGLAVRSTKEPFFFYAVACSLYLVLAIISSAGLSYLD 257 >gi|254173468|ref|ZP_04880141.1| amino acid ABC transporter permease protein [Thermococcus sp. AM4] gi|214032877|gb|EEB73706.1| amino acid ABC transporter permease protein [Thermococcus sp. AM4] Length = 225 Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 62/212 (29%), Positives = 111/212 (52%), Gaps = 12/212 (5%) Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240 +T++ F+ F LG +L++ +R + K KAL YI LI G P L+ + Sbjct: 16 VTLELTVVGFIGGFALGFLLAV-----ARTYGGKLSKALSTAYIE--LIRGTPMLLQL-- 66 Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300 Y + F P++ + N+ ++P ++ + + +AA+ AE +R +V GQ+EAA Sbjct: 67 -YIIGFGLPLVIR-NYFPHFVMNPT-LAAALGMVINSAAYQAEYIRGAFNSVEYGQVEAA 123 Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 ++LG+T R V+ PQA R ++P T++ + LLK SSLA+ + +L+ +QT Sbjct: 124 LSLGMTKWGIIRHVIFPQAFRIMLPSWTNEMVYLLKYSSLAMLLAVPELMYQASVAASQT 183 Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 +I L+ IYL + +I M ++ ++ Sbjct: 184 FLYAQIYLVVAGIYLVFATLIIGIMRKIELRL 215 >gi|148982289|ref|ZP_01816696.1| cystine transport system permease protein [Vibrionales bacterium SWAT-3] gi|145960554|gb|EDK25911.1| cystine transport system permease protein [Vibrionales bacterium SWAT-3] Length = 139 Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 32/86 (37%), Positives = 62/86 (72%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + I L+ + AA++AE +R+ +I + R QMEA++++G+T +A R V+LPQA R +P Sbjct: 7 FSAAVIGLTLHFAAYMAESIRAAIIGIDRSQMEASLSVGMTTSQAMRRVILPQATRVALP 66 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVS 351 L + +++++K++SLA +G A++++ Sbjct: 67 SLMNYFIDMIKSTSLAFTLGVAEIMA 92 >gi|125718885|ref|YP_001036018.1| ABC-type arginine/histidine transporter, permease protein, putative [Streptococcus sanguinis SK36] gi|125498802|gb|ABN45468.1| ABC-type arginine/histidine transporter, permease protein, putative [Streptococcus sanguinis SK36] Length = 228 Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 54/166 (32%), Positives = 87/166 (52%), Gaps = 6/166 (3%) Query: 233 PTLVLIALKYQLHFDKPVLGQ-FNFIGGSTVSPEFMSLYIALSCY---TAAFIAEIVRSG 288 P ++LI Y L +L Q F +G +F LY A Y T ++EI+RS Sbjct: 64 PPILLILFFYSLF--PSLLNQIFKSLGSQVDVFKFNPLYYAFIIYSLMTTGSLSEILRSA 121 Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348 ++ V +GQ+EAA A+GLT+ +A R ++ PQA+RS +P L + +NL+K +SL + D Sbjct: 122 ILTVDKGQLEAAQAIGLTNFQAYRRIVFPQALRSALPNLANLVINLVKGTSLVFVMTVKD 181 Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394 + ++ + + Q E L+ IYL + +I L + AL Sbjct: 182 ITALAKIEASHSYQYSESYLVIFVIYLIICGLIQWIFRGLEKRSAL 227 >gi|121604398|ref|YP_981727.1| polar amino acid ABC transporter inner membrane subunit [Polaromonas naphthalenivorans CJ2] gi|120593367|gb|ABM36806.1| amino acid ABC transporter membrane protein 1, PAAT family [Polaromonas naphthalenivorans CJ2] Length = 223 Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 41/111 (36%), Positives = 67/111 (60%), Gaps = 10/111 (9%) Query: 274 SCYTAAFIA----------EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 S YTAA A EI+R+G+ ++P+GQ+EA +AL L + R V+L A+++I Sbjct: 88 SAYTAALTALVINLGAYATEIIRAGIESIPKGQIEAGLALNLKRHEIFRFVILKPALKAI 147 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374 P LTSQ++ L+ +S++ A+ DL SV + +QT ++ EI ++ IY Sbjct: 148 YPALTSQFILLMLSSAVVSAISADDLTSVAANLQSQTFRSFEIYIVVAGIY 198 >gi|330806944|ref|YP_004351406.1| Putative ABC transporter, permease component [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327375052|gb|AEA66402.1| Putative ABC transporter, permease component [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 221 Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 38/128 (29%), Positives = 73/128 (57%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I S AA+ EI+R+ + ++ RGQ EAA ++G+T + R +LPQA R+ +PPL + Sbjct: 93 IGFSLNMAAYACEILRAAISSIERGQWEAAASIGMTRAQTLRRAILPQAARTALPPLGNS 152 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 +++L+K+++LA + +L I +T + + L IY L+ +++ N L A Sbjct: 153 FISLVKDTALAATIQVPELFRQAQLITARTFEIFTMYLAAALIYWVLASVLSHLQNVLEA 212 Query: 391 KIALKEKK 398 ++ +++ Sbjct: 213 RVNRHDQE 220 Score = 38.1 bits (87), Expect = 2.1, Method: Compositional matrix adjust. Identities = 18/32 (56%), Positives = 21/32 (65%) Query: 118 RLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 RLS KLV WI R+YV FR P LV +F +Y Sbjct: 44 RLSRFKLVNWIARIYVSFFRGTPLLVQLFVIY 75 >gi|295689320|ref|YP_003593013.1| polar amino acid ABC transporter inner membrane subunit [Caulobacter segnis ATCC 21756] gi|295431223|gb|ADG10395.1| polar amino acid ABC transporter, inner membrane subunit [Caulobacter segnis ATCC 21756] Length = 219 Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 42/128 (32%), Positives = 72/128 (56%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P ++ I S AA+ EI+RS + AV +GQ EAA LG++ + R V+LPQA R+ Sbjct: 86 PALVAAGIGFSLNVAAYACEILRSAIAAVDKGQWEAATVLGMSRGQTLRRVILPQAARTA 145 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 + PL++ +++L+K++SLA + +L I +T + + L IY +S ++A Sbjct: 146 VAPLSNSFISLVKDTSLAATIQVPELFRQTQLITARTYEIFTMYLAAAAIYWIVSTVLAA 205 Query: 384 FMNRLNAK 391 +RL + Sbjct: 206 GQHRLERR 213 >gi|261366633|ref|ZP_05979516.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Subdoligranulum variabile DSM 15176] gi|282571452|gb|EFB76987.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Subdoligranulum variabile DSM 15176] Length = 274 Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 39/122 (31%), Positives = 75/122 (61%), Gaps = 1/122 (0%) Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329 ++ +S T A++AE VR G++++ GQ E A+++G+TH + V+LPQA+R+IIP + + Sbjct: 110 FLIVSINTGAYMAETVRGGIVSIDPGQTEGAMSIGMTHWQTMLHVILPQALRNIIPQIGN 169 Query: 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 ++ +K++S+ + DL V +++ E I M IYL+++ ++A ++ RL Sbjct: 170 NFIINIKDTSVLSVISITDLFFVHKSVVGALYTYFESATIVMIIYLTMT-LLASYLLRLW 228 Query: 390 AK 391 K Sbjct: 229 EK 230 >gi|126179312|ref|YP_001047277.1| polar amino acid ABC transporter, inner membrane subunit [Methanoculleus marisnigri JR1] gi|125862106|gb|ABN57295.1| amino acid ABC transporter membrane protein 1, PAAT family [Methanoculleus marisnigri JR1] Length = 225 Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 53/165 (32%), Positives = 91/165 (55%), Gaps = 11/165 (6%) Query: 231 GLPTLVLIALKYQLHFDKPVLGQFN-FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289 GLP LVL+ L + F LG + F+ G+ V L AA+ ++I R + Sbjct: 63 GLPILVLLFLFWFGIFPGLGLGNLSAFVVGAVV----------LGLRGAAYQSQIFRGAI 112 Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349 +V GQM AA +LG++ A R V+LPQAMR +P +++Y N+L +S++ A+G +L Sbjct: 113 QSVGEGQMIAARSLGMSRLTAIRSVILPQAMRIALPGWSNEYPNILTDSAVCYAIGVVEL 172 Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394 +++ ++ QT + + L I++ L+ ++RL A+IA+ Sbjct: 173 LTITSRMVTQTNITMPVYLATAGIFIILNYGGLKLLHRLEARIAI 217 >gi|325956802|ref|YP_004292214.1| amino acid ABC transporter permease [Lactobacillus acidophilus 30SC] gi|325333367|gb|ADZ07275.1| amino acid ABC transporter permease [Lactobacillus acidophilus 30SC] Length = 224 Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 54/188 (28%), Positives = 98/188 (52%), Gaps = 17/188 (9%) Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268 R H K + + LY+ F I +PT+VL+ Y +++ P N+ S +M+ Sbjct: 47 RTMHNKVVRFILRLYLEFFRI--VPTIVLL---YLVYYILPRTFHVNW------SATWMA 95 Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328 + +A S + AA ++IVR L +VP+ Q E+ +ALGL++ + R VLLPQA++ +P Sbjct: 96 V-LAFSLWVAAEFSDIVRGALESVPKSQRESGLALGLSNLQLFRYVLLPQAVKLELPATI 154 Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF-----IYLSLSIMIAL 383 + ++K +SL + + ++++VG II Q + W++ +Y L ++ Sbjct: 155 NLATRVIKTTSLLMVINIMEVINVGQQIIEANNQKYPTGVFWIYGFIFILYFILDYPLSA 214 Query: 384 FMNRLNAK 391 + RL A Sbjct: 215 WAKRLTAN 222 Score = 40.4 bits (93), Expect = 0.48, Method: Compositional matrix adjust. Identities = 19/58 (32%), Positives = 35/58 (60%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 G + W+A ++ +GT+ G R NK+V +I R+Y+E FR +P +V+++ +Y Sbjct: 21 GLWASIWIAVVSLLIGLALGTIFGILRTMHNKVVRFILRLYLEFFRIVPTIVLLYLVY 78 >gi|296877417|ref|ZP_06901454.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus parasanguinis ATCC 15912] gi|296431578|gb|EFH17388.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus parasanguinis ATCC 15912] Length = 520 Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 40/109 (36%), Positives = 63/109 (57%) Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 +S T A+++EIVR G++AV GQ EAA ALG+TH + R V+LPQ +R+I+P +++ Sbjct: 383 VSINTGAYMSEIVRGGILAVDPGQFEAATALGMTHGQTMRKVVLPQVVRNILPATGNEFG 442 Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 +K++S+ + +L G T+ Q Q I IY L+ I Sbjct: 443 INIKDTSVLNVISVVELYFTGNTVATQNYQYFPTFTIIAVIYFVLTFTI 491 >gi|312867750|ref|ZP_07727956.1| ABC transporter, permease protein [Streptococcus parasanguinis F0405] gi|311096813|gb|EFQ55051.1| ABC transporter, permease protein [Streptococcus parasanguinis F0405] Length = 213 Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 55/185 (29%), Positives = 96/185 (51%), Gaps = 24/185 (12%) Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239 +LT+ A + + S LGIV++ S+ H LL I+ +++ G P L+ Sbjct: 16 SLTLQVFAFVLILSIPLGIVVAFLLQLRSKILHG-------LLTINIWIMRGTPLLL--- 65 Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT---AAFIAEIVRSGLIAVPRGQ 296 QL F VL ++ L A++ +T AA+ AEI R G++A+P GQ Sbjct: 66 ---QLIFIYYVL--------PSIGIRIDRLPAAITAFTLNYAAYFAEIFRGGIVAIPTGQ 114 Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356 EAA L L+ + R ++LPQ ++ ++P + ++ ++L+K++SL A+G +DL+ T Sbjct: 115 YEAAKVLKLSSWQTIRYIILPQVVKIVLPSVFNEVMSLIKDTSLVYALGISDLILASRTA 174 Query: 357 INQTG 361 N+ Sbjct: 175 ANRDA 179 >gi|311106238|ref|YP_003979091.1| amino ABC transporter permease, 3-TM region, His/Glu/Gln/Arg/opine family domain-containing protein 9 [Achromobacter xylosoxidans A8] gi|310760927|gb|ADP16376.1| amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family domain protein 9 [Achromobacter xylosoxidans A8] Length = 217 Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 35/134 (26%), Positives = 77/134 (57%), Gaps = 1/134 (0%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P+F + +A + AA+ AEI R+G+ +V RGQ E + LG+T+ + R ++LPQ ++ + Sbjct: 85 PDFPAAVVAFALNYAAYFAEIFRAGIQSVDRGQYEGSKVLGMTYLQTLRRIVLPQMVQRV 144 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 +PP++++ + L+K++SL + D++ I+ + ++ F YL +++++ Sbjct: 145 LPPMSNETITLVKDTSLIYVLALNDILRTARGIVQRDFTTTPFLVAAAF-YLIMTLILTW 203 Query: 384 FMNRLNAKIALKEK 397 F + + A ++ Sbjct: 204 FFQHMEKRYAKYDQ 217 >gi|194016444|ref|ZP_03055058.1| glutamine ABC transporter, permease/substrate-binding protein [Bacillus pumilus ATCC 7061] gi|194011917|gb|EDW21485.1| glutamine ABC transporter, permease/substrate-binding protein [Bacillus pumilus ATCC 7061] Length = 214 Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 46/153 (30%), Positives = 83/153 (54%), Gaps = 6/153 (3%) Query: 249 PVLGQFNFIGGSTVSPEFMSL------YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302 P + Q FI + EF+SL I ++ A+ +EI+R+G+ ++ +GQ EAA + Sbjct: 62 PFIVQLFFIYFGLNTLEFISLDRVPAGIITVAINAGAYFSEIIRAGIQSIDKGQTEAARS 121 Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362 LG T + R ++LPQA R ++P +T+Q + LK++SL +G AD++ G + T Sbjct: 122 LGFTGGQNMRFIVLPQAFRRMLPAITNQAIISLKDTSLLSIIGIADIMQRGQVQASATFD 181 Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395 + + LI IY + +++L + + +K Sbjct: 182 PLNVWLIVGIIYFVIIYLLSLLASYAERRFDIK 214 >gi|209547562|ref|YP_002279480.1| polar amino acid ABC transporter inner membrane protein [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209538806|gb|ACI58740.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 592 Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 41/133 (30%), Positives = 77/133 (57%), Gaps = 3/133 (2%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + ++ L+ +AF AEIVR G+++V GQ+EAA ALGL R+ ++LPQAMRSI+P Sbjct: 166 FAAAFLGLTLNQSAFFAEIVRGGILSVDHGQLEAAAALGLPRRRQAFRIVLPQAMRSILP 225 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL---IWMFIYLSLSIMIA 382 ++ + L K++S+ + +L I + + I +++ +W I +++ + Sbjct: 226 TGFNELIGLAKSTSMVYVLALPELFYTVQVIYRRNLEVIPLLMVATVWYLIIMTVLSIAQ 285 Query: 383 LFMNRLNAKIALK 395 ++ R +K A++ Sbjct: 286 HYIERYFSKGAVR 298 >gi|220923864|ref|YP_002499166.1| polar amino acid ABC transporter inner membrane subunit [Methylobacterium nodulans ORS 2060] gi|219948471|gb|ACL58863.1| polar amino acid ABC transporter, inner membrane subunit [Methylobacterium nodulans ORS 2060] Length = 217 Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 34/96 (35%), Positives = 62/96 (64%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + L Y + F AEI+R+G+ ++ RGQ +A++ALG+++ + R ++LPQA+R ++PPL Q Sbjct: 94 LGLGFYASGFYAEILRAGVQSIDRGQTDASLALGMSYIQRMRRIILPQALRRMVPPLVGQ 153 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 + LKN++L + DL+ I + T + +E+ Sbjct: 154 TIMQLKNTTLLSVLTIPDLLYQASYISSFTYRPMEV 189 Score = 40.4 bits (93), Expect = 0.56, Method: Compositional matrix adjust. Identities = 19/40 (47%), Positives = 27/40 (67%) Query: 110 IGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 IG V +L+ +LV WI R++VE FRNIP LV++ + Y Sbjct: 36 IGLFVALLQLTPWRLVRWIGRIWVEFFRNIPLLVLLLWTY 75 >gi|154508368|ref|ZP_02044010.1| hypothetical protein ACTODO_00865 [Actinomyces odontolyticus ATCC 17982] gi|153798002|gb|EDN80422.1| hypothetical protein ACTODO_00865 [Actinomyces odontolyticus ATCC 17982] Length = 225 Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 34/85 (40%), Positives = 54/85 (63%) Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333 + + A + ++VR LIA+PR Q E+A ALGLT R+ R V+LPQ +R + PP + Sbjct: 100 TLWGGAEMGDLVRGALIAIPRHQYESAYALGLTPRQTMRRVILPQTLRRLAPPAVNLITR 159 Query: 334 LLKNSSLAVAVGFADLVSVGGTIIN 358 ++K +SL V +G +++ VG II+ Sbjct: 160 MVKTTSLVVLIGVVEVLKVGQQIID 184 >gi|117625559|ref|YP_858882.1| putative transport system permease protein [Escherichia coli APEC O1] gi|115514683|gb|ABJ02758.1| putative transport system permease protein [Escherichia coli APEC O1] Length = 368 Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 63/220 (28%), Positives = 107/220 (48%), Gaps = 28/220 (12%) Query: 132 YVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV 191 Y+ V+ I PLVV + +Y L + D + R TLT+ + Sbjct: 126 YIAVWAVIYPLVVWWLMYGGFLGL----DR---------VETRQWGGLTLTLIIASVGIA 172 Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251 + GI+L+L R H + L +++I + G+P LI + + P+ Sbjct: 173 GALPWGILLAL-----GRRSHMPIVRILSVIFIEFWR--GVP---LITVLFMSSVMLPL- 221 Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311 F+ T + + + + + +A++AE+VR GL A+P+GQ EAA +L L + K Sbjct: 222 ----FMAEGTSIDKLIRALVGVILFQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQ 277 Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 LV+LPQA++ +IP L + + L K++SL + +G DL S Sbjct: 278 GLVILPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFS 317 >gi|294492998|gb|ADE91754.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Escherichia coli IHE3034] gi|307625129|gb|ADN69433.1| putative transport system permease protein [Escherichia coli UM146] gi|323957582|gb|EGB53296.1| inner membrane transport system [Escherichia coli H263] Length = 367 Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 63/220 (28%), Positives = 107/220 (48%), Gaps = 28/220 (12%) Query: 132 YVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV 191 Y+ V+ I PLVV + +Y L + D + R TLT+ + Sbjct: 125 YIAVWAVIYPLVVWWLMYGGFLGL----DR---------VETRQWGGLTLTLIIASVGIA 171 Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251 + GI+L+L R H + L +++I + G+P LI + + P+ Sbjct: 172 GALPWGILLAL-----GRRSHMPIVRILSVIFIEFWR--GVP---LITVLFMSSVMLPL- 220 Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311 F+ T + + + + + +A++AE+VR GL A+P+GQ EAA +L L + K Sbjct: 221 ----FMAEGTSIDKLIRALVGVILFQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQ 276 Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 LV+LPQA++ +IP L + + L K++SL + +G DL S Sbjct: 277 GLVILPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFS 316 >gi|238854604|ref|ZP_04644937.1| L-cystine transport system permease protein TcyB [Lactobacillus jensenii 269-3] gi|282933427|ref|ZP_06338806.1| L-cystine transport system permease protein TcyB [Lactobacillus jensenii 208-1] gi|238832789|gb|EEQ25093.1| L-cystine transport system permease protein TcyB [Lactobacillus jensenii 269-3] gi|281302441|gb|EFA94664.1| L-cystine transport system permease protein TcyB [Lactobacillus jensenii 208-1] Length = 225 Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 40/128 (31%), Positives = 73/128 (57%), Gaps = 7/128 (5%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + S T A+ +E +R+ ++AVP+ Q EAA ++GL + K V+ PQA+R IPPL++ Sbjct: 101 LTFSLNTGAYASETIRASILAVPQDQWEAAYSIGLPYHKVLSRVIFPQAIRIAIPPLSNS 160 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++ L+K++SLA ++ ++ V I + Q M +Y ++I+ A+F + L+ Sbjct: 161 FIGLVKDTSLASSITLVEMFMVSQEIASHNYQP-------MLMYSIVAIIYAIFCSLLSL 213 Query: 391 KIALKEKK 398 EK+ Sbjct: 214 LQLYLEKR 221 >gi|319940825|ref|ZP_08015164.1| polar amino acid ABC transporter [Sutterella wadsworthensis 3_1_45B] gi|319805707|gb|EFW02488.1| polar amino acid ABC transporter [Sutterella wadsworthensis 3_1_45B] Length = 227 Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 52/177 (29%), Positives = 96/177 (54%), Gaps = 15/177 (8%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 +A+PL+ + + +P + LK D PV+ IG + ++ I + Sbjct: 63 RAVPLVLVLFWFFLLMPEV----LKIAFGLDHPVM-----IGAN------LTAIITFVLF 107 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 AA+ AEI+R+G+ ++ RGQ AA LGLT+ + R V+LPQA+R+++P L +Q + L + Sbjct: 108 EAAYFAEIMRAGIQSIGRGQFFAATGLGLTYGQTMRYVILPQAIRNMLPVLLTQTIILFQ 167 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393 ++SL + +D + I + GQ + + YLS+S+ +++ + RL K++ Sbjct: 168 DTSLVYVISGSDFMGAVAKIAQRDGQLVLMYSFAALCYLSVSLSLSMLIRRLQTKMS 224 >gi|239928550|ref|ZP_04685503.1| glutamate permease [Streptomyces ghanaensis ATCC 14672] gi|291436875|ref|ZP_06576265.1| glutamate permease [Streptomyces ghanaensis ATCC 14672] gi|291339770|gb|EFE66726.1| glutamate permease [Streptomyces ghanaensis ATCC 14672] Length = 304 Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 44/144 (30%), Positives = 86/144 (59%), Gaps = 5/144 (3%) Query: 260 STVSPEFMSLY---IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316 + VS + LY L Y A+ +AEIVR+G++++P+GQ E A+A+GL + RL+LL Sbjct: 131 TNVSSDDRPLYAVVTGLVLYNASVLAEIVRAGILSLPKGQAEGAMAIGLRKNQVMRLILL 190 Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAV-GFADLVSVGGTIINQTG-QAIEIILIWMFIY 374 PQA+ +++P + SQ + ++K+++L AV F +L++ T+ G I + + ++ Sbjct: 191 PQAVTAMLPAIVSQLVVIVKDTALGGAVLTFPELLASANTMSGYYGANVIASLTVVSVLF 250 Query: 375 LSLSIMIALFMNRLNAKIALKEKK 398 ++L+ + F + L A++ ++ Sbjct: 251 IALNFALTSFASWLEARLRRSKRS 274 >gi|218560339|ref|YP_002393252.1| amino-acid transporter subunit ; membrane component of ABC superfamily [Escherichia coli S88] gi|218367108|emb|CAR04882.1| amino-acid transporter subunit ; membrane component of ABC superfamily [Escherichia coli S88] gi|323951210|gb|EGB47085.1| inner membrane transport system [Escherichia coli H252] Length = 367 Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 63/220 (28%), Positives = 107/220 (48%), Gaps = 28/220 (12%) Query: 132 YVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV 191 Y+ V+ I PLVV + +Y L + D + R TLT+ + Sbjct: 125 YIAVWAVIYPLVVWWLMYGGFLGL----DR---------VETRQWGGLTLTLIIASVGIA 171 Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251 + GI+L+L R H + L +++I + G+P LI + + P+ Sbjct: 172 GALPWGILLAL-----GRRSHMPIVRILSVIFIEFWR--GVP---LITVLFMSSVMLPL- 220 Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311 F+ T + + + + + +A++AE+VR GL A+P+GQ EAA +L L + K Sbjct: 221 ----FMAEGTSIDKLIRALVGVILFQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQ 276 Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 LV+LPQA++ +IP L + + L K++SL + +G DL S Sbjct: 277 GLVILPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFS 316 >gi|210618017|ref|ZP_03291852.1| hypothetical protein CLONEX_04085 [Clostridium nexile DSM 1787] gi|210149010|gb|EEA80019.1| hypothetical protein CLONEX_04085 [Clostridium nexile DSM 1787] Length = 233 Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 53/206 (25%), Positives = 105/206 (50%), Gaps = 22/206 (10%) Query: 189 IFVFSFVLGIVLSLF----ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244 I +F+ ++G+ + LF +S++ + K +Y T +I G P +V + + Y + Sbjct: 34 ISIFAILIGVAIGLFIAVVKVTVSKNIFVRILKWFCNVY--TTVIRGTPVMVQLLIMYNM 91 Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304 F + F+G I + A++AEI+R+G+ ++ RGQMEA +LG Sbjct: 92 VFTARDTNEI-FVGA-----------ICFGINSGAYVAEIIRAGIESIDRGQMEAGRSLG 139 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364 + + R +++PQA+++I+P L ++++ L+K +S+A + DL I G Sbjct: 140 FNYIQTMRYIIVPQAVKNILPALGNEFIVLIKETSVAGVIAVTDLTKAAQYI----GSTD 195 Query: 365 EIILIWMFIYLSLSIMIALFMNRLNA 390 I+L +F+ ++I L + +L + Sbjct: 196 FIVLPPLFVAAGCYLVIVLGLTKLQS 221 >gi|209546901|ref|YP_002278819.1| polar amino acid ABC transporter inner membrane protein [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209538145|gb|ACI58079.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 222 Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 46/128 (35%), Positives = 72/128 (56%), Gaps = 4/128 (3%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IAL+ Y A +E R+ L ++ Q++A +ALGL V+LPQA+ IP L S Sbjct: 95 IALTLYMGAITSETFRASLKSIGLEQLDACVALGLPRSAQVINVVLPQAVLRAIPTLLSN 154 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS----LSIMIALFMN 386 ++L K S+L AVG ADL+ VG I N T + +E++ + IY + L+ ++L Sbjct: 155 CVSLFKESALVSAVGMADLMFVGQNISNNTARPVEVLTVVALIYFAIAFPLTRAVSLIEG 214 Query: 387 RLNAKIAL 394 R+ K+A+ Sbjct: 215 RILKKLAI 222 >gi|158424241|ref|YP_001525533.1| amino acid ABC transporter, permease protein [Azorhizobium caulinodans ORS 571] gi|158331130|dbj|BAF88615.1| amino acid ABC transporter, permease protein [Azorhizobium caulinodans ORS 571] Length = 219 Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 38/111 (34%), Positives = 63/111 (56%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P ++ I++S Y + ++ +I R + AVP+ Q EA+ LG+T + R ++LPQA+R Sbjct: 85 PALVAASISMSIYVSGYLGDIWRGCIEAVPKPQWEASECLGMTRVQQFRHIILPQALRIA 144 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374 +PP T + ++KN+S+ +GF +L G I N T Q + L IY Sbjct: 145 LPPTTGFAVQVVKNTSITSIIGFVELSRAGQLINNSTFQPFRVFLTVAAIY 195 >gi|116751368|ref|YP_848055.1| polar amino acid ABC transporter inner membrane subunit [Syntrophobacter fumaroxidans MPOB] gi|116700432|gb|ABK19620.1| polar amino acid ABC transporter, inner membrane subunit [Syntrophobacter fumaroxidans MPOB] Length = 221 Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 39/113 (34%), Positives = 64/113 (56%) Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338 A+I+EI+R L++V +GQ +AA + G + ++ V+LPQA+ +PPL S + LLK S Sbjct: 101 AYISEIIRGALLSVDKGQQDAAFSFGFSWLQSMTYVILPQAVSVALPPLVSSFSALLKES 160 Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 SL + +L V I +T +A+E+ L +Y ++ +A RL K Sbjct: 161 SLVSVLAITELTRVSQLIYTRTFRALEVYLAIGVLYFLMTWFVARLSKRLERK 213 >gi|326771647|ref|ZP_08230932.1| glutamate transport system permease protein GluD [Actinomyces viscosus C505] gi|326637780|gb|EGE38681.1| glutamate transport system permease protein GluD [Actinomyces viscosus C505] Length = 286 Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 39/100 (39%), Positives = 65/100 (65%), Gaps = 1/100 (1%) Query: 260 STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319 +T+S +F L + + T+A AE+ RSG+ A+ RGQ EAA ALG++ RL+L PQA Sbjct: 148 ATIS-DFWKLALPIVMCTSATTAEVFRSGVRALDRGQTEAAWALGMSPSLTMRLILAPQA 206 Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359 +R ++P L +Q + ++K ++LA + + +L+ G T+I Q Sbjct: 207 LRLMLPTLITQMVTIIKGTTLAYVLAYPELMYRGSTMIGQ 246 >gi|269120912|ref|YP_003309089.1| polar amino acid ABC transporter inner membrane subunit [Sebaldella termitidis ATCC 33386] gi|268614790|gb|ACZ09158.1| polar amino acid ABC transporter, inner membrane subunit [Sebaldella termitidis ATCC 33386] Length = 265 Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 49/185 (26%), Positives = 103/185 (55%), Gaps = 11/185 (5%) Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ-FNFIGGSTVSPEFM 267 + F K + + +YI+ F G P +V + +++ PVL Q F+F + P Sbjct: 67 KKFFIKLSQIIIKIYIAVFR--GTPMIVQAMV---IYYGLPVLLQRFDF----NLDPIPA 117 Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327 +L+I +S T +++AEI+R G+ +V +GQ+E A A+G++H + + ++ PQA+R+++P + Sbjct: 118 ALFI-VSINTGSYMAEIIRGGIDSVDKGQLEGAQAIGMSHFQTMKSIIFPQAIRNVLPSV 176 Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387 ++++ +K++S+ + +L ++ + E+ +I IY L+ I+L + Sbjct: 177 GNEFIINIKDTSVLNVISVTELFFTSKSLAGTYTRYYEVFIITSAIYFFLTFTISLILRF 236 Query: 388 LNAKI 392 + KI Sbjct: 237 VEKKI 241 >gi|237730188|ref|ZP_04560669.1| conserved hypothetical protein [Citrobacter sp. 30_2] gi|226908794|gb|EEH94712.1| conserved hypothetical protein [Citrobacter sp. 30_2] Length = 368 Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 34/76 (44%), Positives = 53/76 (69%) Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335 + +A++AE+VR GL A+P+GQ EAA +L L + K LV+LPQA++ +IP L + + L Sbjct: 242 FQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQGLVILPQALKLVIPGLVNTIIALF 301 Query: 336 KNSSLAVAVGFADLVS 351 K++SL + +G DL S Sbjct: 302 KDTSLVIIIGLFDLFS 317 >gi|93006751|ref|YP_581188.1| amino acid ABC transporter permease [Psychrobacter cryohalolentis K5] gi|92394429|gb|ABE75704.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Psychrobacter cryohalolentis K5] Length = 245 Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 44/137 (32%), Positives = 78/137 (56%), Gaps = 7/137 (5%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G + P F S IA S A+ +E VR+ ++++P+GQ EA +GLT+ + R V+LPQ Sbjct: 107 GVKLDP-FPSAIIAFSLNIGAYASETVRASILSIPKGQWEAGSTVGLTYLQTFRHVILPQ 165 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM---FIYL 375 A+R +PPL++ +++L+K++SLA V +L I T + E +L+++ IY Sbjct: 166 ALRVSVPPLSNTFISLVKDTSLASLVLVTELFKQAQII---TARNYEFMLVYIEAAVIYW 222 Query: 376 SLSIMIALFMNRLNAKI 392 + + + RL ++ Sbjct: 223 GICLFLTFIQGRLETRL 239 >gi|315649609|ref|ZP_07902694.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC [Paenibacillus vortex V453] gi|315275082|gb|EFU38457.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC [Paenibacillus vortex V453] Length = 217 Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 66/223 (29%), Positives = 113/223 (50%), Gaps = 18/223 (8%) Query: 173 NRGLSF-PTLTMDTNAKIFV--FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229 N + F PTL + V FS VL I +S FA LSR + + +Y+ F Sbjct: 3 NSWIDFLPTLLKGAEITVLVAFFSAVLAIAMS-FAAGLSRLSKLWIVRTVTAVYVEIFR- 60 Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289 T +L+ L + L+F P FIG P+ ++ +A+ A+ +EIVRS + Sbjct: 61 ---GTSLLVQL-FWLYFALP------FIGIEL--PKMLAAILAIGFNFGAYGSEIVRSAV 108 Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349 +AVP+GQ EA++AL + + V+LPQA ++PP +Q + L+K++SL + ADL Sbjct: 109 LAVPKGQWEASVALNMKPWQRMWNVILPQASLRMLPPFGNQLVELIKSTSLVYFITMADL 168 Query: 350 VSVGGTIINQ-TGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 + N EI+++ + +Y ++ ++++ + L K Sbjct: 169 TYQAMVLRNNYISWTTEILVLLLLMYFVIATLVSMAVRLLERK 211 >gi|291003747|ref|ZP_06561720.1| ABC transporter, nucleotide binding/ATPase protein [Saccharopolyspora erythraea NRRL 2338] Length = 791 Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 58/168 (34%), Positives = 93/168 (55%), Gaps = 23/168 (13%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 ++LPLL + F I+ LP ++ +L +PVLG SP F+ +AL Sbjct: 350 RSLPLLVLLIF-IYNLPQVI-----PEL---RPVLG----------SP-FVVGLVALVLS 389 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 A+IAEI R GL +V GQ EAA ALG+ + RLV++PQA R +P L +Q++ +LK Sbjct: 390 ETAYIAEIHRGGLKSVSVGQGEAARALGIPYGGVQRLVVIPQAFRVALPALGNQFITILK 449 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 +SL ++ A+++ VG + Q + +E +L Y+ +++ LF Sbjct: 450 LTSLVSSISLAEILLVGQRLYTQNFKVLETLLAVSIFYV---VLVTLF 494 >gi|86357909|ref|YP_469801.1| amino acid ABC transporter permease [Rhizobium etli CFN 42] gi|86282011|gb|ABC91074.1| probable amino acid ABC transporter, permease protein [Rhizobium etli CFN 42] Length = 216 Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 39/95 (41%), Positives = 59/95 (62%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 ++++ IA + + +AF+ EI R + AVP+GQ EAA ALGL + + V+LPQA++ +P Sbjct: 85 WIAVAIAFTLHASAFLGEIWRGSIEAVPKGQTEAANALGLHYISRMKDVVLPQALKISMP 144 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 + L+K +SLA VGF +L G I NQT Sbjct: 145 ATIGFLVQLIKGTSLAAIVGFIELTRAGQIISNQT 179 >gi|312961910|ref|ZP_07776407.1| amino acid ABC transporter, permease protein [Pseudomonas fluorescens WH6] gi|311283720|gb|EFQ62304.1| amino acid ABC transporter, permease protein [Pseudomonas fluorescens WH6] Length = 321 Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 65/192 (33%), Positives = 97/192 (50%), Gaps = 15/192 (7%) Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF--DKP 249 FS +LG L+L RLS AL YI F +P L+++ + Y + D Sbjct: 94 FSVILGTALAL--ARLS---GSPLLAALAWGYIWFFR--SMPALLVLIILYNFAYLYDHI 146 Query: 250 VLG----QFNFIGGSTVS--PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 VLG + F STV +F + + LS AA+ AEI+R GLI V GQ EAA AL Sbjct: 147 VLGVPFTEVVFAEWSTVDVLSQFTTAVLGLSLMQAAYAAEIIRGGLIGVDAGQHEAAAAL 206 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363 GL + ++LPQA+RSI+P ++ + L+K +S+ + +L I N+T Sbjct: 207 GLPASRRIFRIILPQALRSILPSGFNEIIGLVKGTSIVYVLALPELFYTVQVIYNRTQAV 266 Query: 364 IEIILIWMFIYL 375 I ++++ YL Sbjct: 267 IPLLIVATVWYL 278 >gi|121609555|ref|YP_997362.1| polar amino acid ABC transporter inner membrane subunit [Verminephrobacter eiseniae EF01-2] gi|121554195|gb|ABM58344.1| polar amino acid ABC transporter, inner membrane subunit [Verminephrobacter eiseniae EF01-2] Length = 216 Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 40/126 (31%), Positives = 70/126 (55%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+S+ IAL+CY +A+ EI R + +VP+ Q + + ALG ++ + R V+LPQ++R P Sbjct: 86 FLSVTIALTCYASAYFGEIWRGSIQSVPQTQWQGSAALGFSYLEQMRHVVLPQSVRIATP 145 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 P + L+KN+SLA +G +L + N T + I + + +Y ++ + + Sbjct: 146 PTVGFMVQLVKNTSLASIIGMHELAHAAQYVNNVTLRPILVYGVVGAMYFAVCWPLYMLS 205 Query: 386 NRLNAK 391 RL K Sbjct: 206 RRLEKK 211 >gi|315647911|ref|ZP_07901012.1| polar amino acid ABC transporter, inner membrane subunit [Paenibacillus vortex V453] gi|315276557|gb|EFU39900.1| polar amino acid ABC transporter, inner membrane subunit [Paenibacillus vortex V453] Length = 209 Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 46/143 (32%), Positives = 74/143 (51%), Gaps = 19/143 (13%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 + PLL F FGLP L PV+G++ V F++ +A Sbjct: 61 RGTPLLLQMLFFCFGLPVL-------------PVIGEY------LVLDRFVAACLAFVLN 101 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 AA+ AEI R GL+A+ +GQ EA+ LGL + T V+LPQ R +P ++++ + L+K Sbjct: 102 YAAYFAEIFRGGLLAIDKGQYEASKVLGLNKWQTTTKVILPQMFRVALPAVSNESITLVK 161 Query: 337 NSSLAVAVGFADLVSVGGTIINQ 359 +++L AV +L+ T +N+ Sbjct: 162 DTALLYAVAVPELLHFAYTAVNR 184 >gi|219853972|ref|YP_002471094.1| hypothetical protein CKR_0629 [Clostridium kluyveri NBRC 12016] gi|219567696|dbj|BAH05680.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 215 Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 37/125 (29%), Positives = 76/125 (60%), Gaps = 1/125 (0%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +A + AA++AEI R+G+ ++ RGQ EAA ALG+ + + +++PQA+R+++P + ++ Sbjct: 92 LAFTINYAAYLAEIFRAGIESIDRGQFEAAKALGMNYYETITKIIIPQAIRNVLPAVCNE 151 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 +NL+K+S+L +G DL+ ++ + I I +YL ++ ++ + +L Sbjct: 152 SINLVKDSALVATIGVGDLLRAAKEVVTRD-FTITPFFIAAALYLLITSVLVMGFRQLEK 210 Query: 391 KIALK 395 K ++K Sbjct: 211 KYSVK 215 >gi|153011068|ref|YP_001372282.1| polar amino acid ABC transporter, inner membrane subunit [Ochrobactrum anthropi ATCC 49188] gi|151562956|gb|ABS16453.1| polar amino acid ABC transporter, inner membrane subunit [Ochrobactrum anthropi ATCC 49188] Length = 218 Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 42/102 (41%), Positives = 60/102 (58%), Gaps = 1/102 (0%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G ++P +++ IAL+ + +AF+ EI R + AVP GQ EAA ALGL + R V+LPQ Sbjct: 80 GLGINP-WIAATIALTLHASAFLGEIWRGCIDAVPPGQREAATALGLRYYNRMRYVILPQ 138 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 A R + P + L+K +SLA +GF +L G I N T Sbjct: 139 AARISVAPTVGFLVQLIKGTSLAAIIGFTELTRQGQIINNAT 180 >gi|33596592|ref|NP_884235.1| putative inner membrane component of binding-protein-dependent transport system [Bordetella parapertussis 12822] gi|33601145|ref|NP_888705.1| putative inner membrane component of binding-protein-dependent transport system [Bordetella bronchiseptica RB50] gi|33573293|emb|CAE37274.1| putative inner membrane component of binding-protein-dependent transport system [Bordetella parapertussis] gi|33575580|emb|CAE32658.1| putative inner membrane component of binding-protein-dependent transport system [Bordetella bronchiseptica RB50] Length = 223 Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 54/172 (31%), Positives = 90/172 (52%), Gaps = 7/172 (4%) Query: 233 PTLVLIALKYQLHFDKPVLGQFNF------IGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286 P L AL + P+L Q F + G +SP + +AL + AA+ AE+ R Sbjct: 52 PVSALTALVIEFVRSTPLLVQMYFLFYVLPVTGWQMSP-LTTGILALGLHYAAYCAEVYR 110 Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346 +G+ AVPRGQ EAA AL L+ + V+LPQA+ ++P L + + + K++ L A+ Sbjct: 111 AGIEAVPRGQHEAATALNLSRWRTAVGVVLPQAIPPVVPALGNYLVAMFKDTPLLSAITV 170 Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 +L+ I + T + E + + ++L LS++ A + RL A++ L K Sbjct: 171 VELLQQSKIIGSTTFRYTEPLTLVGVLFLLLSLVAAWGVRRLEARLKLYGGK 222 >gi|293605338|ref|ZP_06687723.1| amino acid ABC superfamily ATP binding cassette transporter [Achromobacter piechaudii ATCC 43553] gi|292816277|gb|EFF75373.1| amino acid ABC superfamily ATP binding cassette transporter [Achromobacter piechaudii ATCC 43553] Length = 217 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 35/134 (26%), Positives = 77/134 (57%), Gaps = 1/134 (0%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P+F + +A + AA+ AEI R+G+ +V RGQ E + LG+T+ + R ++LPQ ++ + Sbjct: 85 PDFPAAVVAFALNYAAYFAEIFRAGIQSVDRGQYEGSKVLGMTYLQTLRRIVLPQMVQRV 144 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 +PP++++ + L+K++SL + D++ I+ + ++ F YL +++++ Sbjct: 145 LPPMSNETITLVKDTSLIYVLALNDILRTARGIVQRDFTTTPFLVAAAF-YLLMTLVLTW 203 Query: 384 FMNRLNAKIALKEK 397 F + + A ++ Sbjct: 204 FFQHMEKRYAKYDQ 217 >gi|239978682|ref|ZP_04701206.1| putative ABC transporter permease protein [Streptomyces albus J1074] Length = 173 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 35/123 (28%), Positives = 75/123 (60%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + L+ + AA+ AEIVR+G+++V GQ++AA +LG+ + R ++LPQAMRSI+P ++ Sbjct: 46 LGLALHQAAYAAEIVRAGVLSVDAGQLQAAASLGIPRLRQIRRIVLPQAMRSILPNAANE 105 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++L K +S+ + +L I + G+ + ++++ Y+ L+ ++++ + + Sbjct: 106 IISLFKGTSIVSVMAIGELFYQVQVIYGRNGRVVPLLMVATLWYVLLTTVLSVVQHHVEK 165 Query: 391 KIA 393 + A Sbjct: 166 RFA 168 >gi|297559646|ref|YP_003678620.1| polar amino acid ABC transporter inner membrane subunit [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296844094|gb|ADH66114.1| polar amino acid ABC transporter, inner membrane subunit [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 380 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 46/134 (34%), Positives = 80/134 (59%), Gaps = 15/134 (11%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 + +PLL + F T+ L + YQ+ FD P G F VS ++ L+ Y Sbjct: 142 RGIPLLMLIFF------TMALPIVAYQM-FDIPA-GTFQ------VS-ALAAVVTGLTLY 186 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 + +AE+ R+G++AVP+GQ EAA A+G+T + RL+L+PQA+ +++P + +Q + LLK Sbjct: 187 NGSVLAEVFRAGVLAVPKGQSEAAQAIGMTRGQNMRLILIPQAITAMMPAIVAQLVVLLK 246 Query: 337 NSSLAVAVGFADLV 350 +S+L + F +++ Sbjct: 247 DSALGYIIAFPEML 260 >gi|190891585|ref|YP_001978127.1| general L-amino acid ABC transporter, permease protein [Rhizobium etli CIAT 652] gi|190696864|gb|ACE90949.1| general L-amino acid ABC transporter, permease protein [Rhizobium etli CIAT 652] Length = 381 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 32/94 (34%), Positives = 62/94 (65%), Gaps = 1/94 (1%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G TV + + I +S + +A++AE++R GL A+P+GQ E A +LGL + + RL+++PQ Sbjct: 238 GWTVD-KLLRAIIGVSIFASAYMAEVIRGGLQAIPKGQFEGADSLGLGYWQKMRLIIMPQ 296 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352 A++ +IP + + ++ + K++SL + DL+ + Sbjct: 297 AIKLVIPGIVNTFIGMFKDTSLVSIISMFDLLGI 330 >gi|209551038|ref|YP_002282955.1| polar amino acid ABC transporter inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209536794|gb|ACI56729.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 216 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 39/95 (41%), Positives = 59/95 (62%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 ++++ IA + + +AF+ EI R + AVP+GQ EAA ALGL + + V+LPQA++ +P Sbjct: 85 WIAVAIAFTLHASAFLGEIWRGSIEAVPKGQSEAANALGLHYVSRMKDVILPQALKISMP 144 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 + L+K +SLA VGF +L G I NQT Sbjct: 145 ATIGFLVQLIKGTSLAAIVGFIELTRAGQIISNQT 179 >gi|111225074|ref|YP_715868.1| glutamate ABC transporter membrane protein [Frankia alni ACN14a] gi|111152606|emb|CAJ64347.1| putative glutamate transport protein (ABC superfamily, membrane) [Frankia alni ACN14a] Length = 197 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 38/82 (46%), Positives = 54/82 (65%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +ALS Y A + E VRSG+ V GQ EAA ALGLT ++ R+++LPQA R+++ PL S Sbjct: 71 VALSIYHGALVCEAVRSGINGVDLGQAEAARALGLTFTQSLRMIVLPQAFRNVLQPLGSV 130 Query: 331 YLNLLKNSSLAVAVGFADLVSV 352 L++N+S+A A G +L V Sbjct: 131 ISALIRNTSIAAAFGVQELTGV 152 >gi|41406150|ref|NP_958986.1| hypothetical protein MAP0052c [Mycobacterium avium subsp. paratuberculosis K-10] gi|41394498|gb|AAS02369.1| GlnQ [Mycobacterium avium subsp. paratuberculosis K-10] Length = 579 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 47/140 (33%), Positives = 82/140 (58%), Gaps = 5/140 (3%) Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316 +GG T + + AL AA+I EI+RSG+ +V GQ+EA+ ALG ++ A RLV++ Sbjct: 418 VGGLTNNNPYPLGIAALGMMAAAYIGEILRSGIQSVDPGQLEASRALGFSYATAMRLVVV 477 Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA----DLVSVGGTIINQTGQAIEIILIWMF 372 PQ +R ++P L +Q++ LLK S+L +G +L VG + +TG + ++ Sbjct: 478 PQGVRRVLPALVNQFIALLKASALVYFLGLVADQRELFQVGRDLNAETGN-LSPLVAAGA 536 Query: 373 IYLSLSIMIALFMNRLNAKI 392 YL L++ + +N ++A++ Sbjct: 537 CYLILTVPLTHLVNMIDARL 556 Score = 36.6 bits (83), Expect = 6.6, Method: Compositional matrix adjust. Identities = 18/57 (31%), Positives = 30/57 (52%) Query: 87 TAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143 T + G NT L FS + ++G ++ +S + + W RVY +VFR +P +V Sbjct: 349 TLLRTGLPNTLILTFSASVIGLVLGMVLAVAGISHARWLRWPARVYTDVFRGLPEVV 405 >gi|322833013|ref|YP_004213040.1| polar amino acid ABC transporter inner membrane subunit [Rahnella sp. Y9602] gi|321168214|gb|ADW73913.1| polar amino acid ABC transporter, inner membrane subunit [Rahnella sp. Y9602] Length = 221 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 54/161 (33%), Positives = 87/161 (54%), Gaps = 11/161 (6%) Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280 LL++ T L LP L++I Y L+F VL +++ + SP+ L AL+ Y A + Sbjct: 52 LLHLYTSLTLALPLLIVI---YLLYF---VLPEYDI---TLTSPQVGVL--ALTLYYAPY 100 Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340 IA++VRS + +PRGQ EA LGL+ + R V+LPQ + ++ PL + L+K+S+L Sbjct: 101 IAQVVRSAIEMLPRGQWEACRVLGLSRTEQLRDVVLPQTLPQMLSPLVGLMIGLIKDSAL 160 Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 V + + I++T +EI L Y L+ +I Sbjct: 161 LSIVSVQEFMYAARQAISETYAPLEIYLTVALCYWVLNSLI 201 >gi|312972460|ref|ZP_07786634.1| general L-amino acid transport system permease aapM domain protein [Escherichia coli 1827-70] gi|310334837|gb|EFQ01042.1| general L-amino acid transport system permease aapM domain protein [Escherichia coli 1827-70] Length = 180 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 36/96 (37%), Positives = 60/96 (62%) Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315 F+ T + + + + + +A++AE+VR GL A+P+GQ EAA +L L + K LV+ Sbjct: 34 FMAEGTSIDKLIRALVGVILFQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQGLVI 93 Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 LPQA++ +IP L + + L K++SL + +G DL S Sbjct: 94 LPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFS 129 >gi|293395293|ref|ZP_06639578.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Serratia odorifera DSM 4582] gi|291422250|gb|EFE95494.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Serratia odorifera DSM 4582] Length = 280 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 42/135 (31%), Positives = 79/135 (58%), Gaps = 3/135 (2%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 +F I LS +A+ AEI+R G++ V +GQ EAA ALGL + T ++LPQA+RSI+ Sbjct: 129 QFSVAVIGLSLVQSAYTAEIIRGGILGVEQGQHEAAAALGLPAYRRTFRIILPQALRSIL 188 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL- 383 P ++ ++L K +S+ + +L I N+T Q I ++++ YL ++ ++++ Sbjct: 189 PTGFNEVISLAKGTSIVYVLSMPELFYTVQVIYNRTQQVIPLLMVATVWYLLITTVLSIL 248 Query: 384 --FMNRLNAKIALKE 396 ++ R A+ +++ Sbjct: 249 QHYVERYFARGTVRQ 263 >gi|254773104|ref|ZP_05214620.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family protein [Mycobacterium avium subsp. avium ATCC 25291] Length = 602 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 47/140 (33%), Positives = 82/140 (58%), Gaps = 5/140 (3%) Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316 +GG T + + AL AA+I EI+RSG+ +V GQ+EA+ ALG ++ A RLV++ Sbjct: 441 VGGLTNNNPYPLGIAALGMMAAAYIGEILRSGIQSVDPGQLEASRALGFSYATAMRLVVV 500 Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA----DLVSVGGTIINQTGQAIEIILIWMF 372 PQ +R ++P L +Q++ LLK S+L +G +L VG + +TG + ++ Sbjct: 501 PQGVRRVLPALVNQFIALLKASALVYFLGLVADQRELFQVGRDLNAETGN-LSPLVAAGA 559 Query: 373 IYLSLSIMIALFMNRLNAKI 392 YL L++ + +N ++A++ Sbjct: 560 CYLILTVPLTHLVNMIDARL 579 Score = 36.6 bits (83), Expect = 6.3, Method: Compositional matrix adjust. Identities = 18/57 (31%), Positives = 30/57 (52%) Query: 87 TAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143 T + G NT L FS + ++G ++ +S + + W RVY +VFR +P +V Sbjct: 372 TLLRTGLPNTLILTFSASVIGLVLGMVLAVAGISHARWLRWPARVYTDVFRGLPEVV 428 >gi|119946081|ref|YP_943761.1| ABC polar amino acid transporter inner membrane protein [Psychromonas ingrahamii 37] gi|119864685|gb|ABM04162.1| ABC polar amino acid transporter inner membrane protein [Psychromonas ingrahamii 37] Length = 216 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 39/121 (32%), Positives = 70/121 (57%), Gaps = 4/121 (3%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 ++L+ +++AF+ +I RS + A+P+GQ EA LGLTH ++ R V+ PQA++ I P Sbjct: 91 LSLTLFSSAFLHDIWRSCIEALPKGQWEACRTLGLTHVQSMRHVIFPQAIKMAIAPTVGF 150 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII----LIWMFIYLSLSIMIALFMN 386 + ++K ++LA +GF +L G + N T Q ++ L++ I LS++ N Sbjct: 151 SVQIVKGTALASIIGFVELTKAGTMLNNATFQPFKVFALVALLYFVICFPLSVLARYLEN 210 Query: 387 R 387 + Sbjct: 211 K 211 >gi|330971469|gb|EGH71535.1| ABC transporter permease protein [Pseudomonas syringae pv. aceris str. M302273PT] Length = 223 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 36/96 (37%), Positives = 59/96 (61%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + LS Y AF +EI R G++++ GQ EAA ALG+ + +++PQA+R +IPPL +Q Sbjct: 97 LCLSLYGGAFYSEIFRGGIMSIDEGQSEAARALGMRRFQVMWRIVIPQALRRMIPPLVNQ 156 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 + LKN+SL + DL+ G I + + + +E+ Sbjct: 157 SIMQLKNTSLLSVLALPDLLYQGQVIAHDSYRPLEV 192 Score = 38.1 bits (87), Expect = 2.7, Method: Compositional matrix adjust. Identities = 22/61 (36%), Positives = 30/61 (49%), Gaps = 4/61 (6%) Query: 93 FVNTFWLAFSGMIPATIIGTLVGA----GRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 + W + TI+G LVG RLS NK++ R YVE+FR P LV + + Sbjct: 18 LITGLWYTLGTTVACTILGMLVGILTALPRLSNNKVLCAPFRAYVEIFRCTPVLVQLVWF 77 Query: 149 Y 149 Y Sbjct: 78 Y 78 >gi|290960130|ref|YP_003491312.1| binding-protein-dependent ABC transporter transmembrane protein [Streptomyces scabiei 87.22] gi|260649656|emb|CBG72771.1| putative binding-protein-dependent transport system integral membrane component [Streptomyces scabiei 87.22] Length = 284 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 38/121 (31%), Positives = 63/121 (52%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + L C A+ +EIVR + AVP Q EA +AL T + R ++LPQA ++PP + Sbjct: 114 LTLGCTYGAYGSEIVRGAVAAVPAAQREAGVALSFTPAQRMRKIVLPQAWPEMVPPFCNL 173 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 + LLK ++L +G AD + N TGQ+ + + + +Y L+ I M ++ Sbjct: 174 LIELLKGTALVSVLGVADTTFAAQLVRNATGQSAPVYSVILVMYFVLAFAITRVMRQVER 233 Query: 391 K 391 + Sbjct: 234 R 234 >gi|239833272|ref|ZP_04681600.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium LMG 3301] gi|239821335|gb|EEQ92904.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium LMG 3301] Length = 241 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 49/176 (27%), Positives = 96/176 (54%), Gaps = 10/176 (5%) Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY----IALSCYTAAFIA 282 F++ G P LV QL+ L QF + S + P Y +AL+ TAA+ A Sbjct: 61 FVLRGTPLLV------QLYIIYYGLSQFPELRRSFLWPFLREPYWCAVLALALNTAAYSA 114 Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342 EI+R G+++V GQ+EAA A G++ R +L PQA+R ++P +++ + ++K+++LA Sbjct: 115 EIIRGGVLSVATGQIEAARAYGMSGFTLVRRILAPQALRQMLPAYSNEVILMVKSTALAS 174 Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 + ++ + +I+ T + +E+ + IYL L+ ++ L +++ +++ Sbjct: 175 TITMMEVTGLAAKLISATYRPVEVFICAGAIYLLLNFVVTRIFKLLEYRLSAAQRQ 230 >gi|218510052|ref|ZP_03507930.1| probable amino acid ABC transporter, permease protein [Rhizobium etli Brasil 5] Length = 121 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 44/120 (36%), Positives = 69/120 (57%), Gaps = 4/120 (3%) Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338 A +E R+ L ++ R Q++A +ALGL R V+LPQA+ +P L S ++L K S Sbjct: 2 AITSETFRASLKSIGREQLDACVALGLPQRVQVVNVVLPQAVLRAVPTLLSNCVSLFKES 61 Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEII----LIWMFIYLSLSIMIALFMNRLNAKIAL 394 +L AVG ADL+ VG I N T + +E++ LI+ I L+ ++L R+ K+A+ Sbjct: 62 ALVSAVGMADLMFVGQNISNNTARPVEVLTVVALIYFVIAFPLTRAVSLIEGRILKKLAI 121 >gi|187921004|ref|YP_001890036.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia phytofirmans PsJN] gi|187719442|gb|ACD20665.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia phytofirmans PsJN] Length = 265 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 41/108 (37%), Positives = 68/108 (62%), Gaps = 13/108 (12%) Query: 259 GSTVSPEFMSLY---------IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309 G ++P +SL+ +AL+ ++A+IAEI RSG+ +V RGQM A ALG+T+ Sbjct: 82 GQGLAPIGLSLFGPNPYPLAIVALALVSSAYIAEIFRSGIQSVGRGQMSACQALGMTYWS 141 Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF----ADLVSVG 353 R V++PQ +R I+P L +Q+++++K+SSL +G DL ++G Sbjct: 142 GMRYVIVPQGVRRILPALANQFISIVKDSSLVYFLGLLTSQRDLFTIG 189 >gi|270290991|ref|ZP_06197214.1| polar amino acid transport system permease [Pediococcus acidilactici 7_4] gi|304385263|ref|ZP_07367608.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Pediococcus acidilactici DSM 20284] gi|270280387|gb|EFA26222.1| polar amino acid transport system permease [Pediococcus acidilactici 7_4] gi|304328470|gb|EFL95691.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Pediococcus acidilactici DSM 20284] Length = 216 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 55/178 (30%), Positives = 90/178 (50%), Gaps = 11/178 (6%) Query: 222 LYISTFLIFGL-----PTLVLIALKYQLHFDKPVLGQ--FNFIGGSTVS---PEFMSLYI 271 L + FL GL P +I+ L P+L Q F F G TV P + + Sbjct: 33 LILGVFLALGLVSKFKPLQYIISAYVWLMRGTPLLLQLIFVFYGLPTVGIVFPRYEAALF 92 Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 A AA+ AEI R GL +V +GQ EA L +T+ + T+ V+LPQ + ++P + ++ Sbjct: 93 AFILNYAAYFAEIFRGGLQSVDKGQYEAGRVLQMTYWQTTKKVVLPQVAKIVLPSIGNEV 152 Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 +NL+K+SSL +G DL+ G + + IL+ + +YL L+ + F+ ++ Sbjct: 153 INLVKDSSLVYVIGIGDLLRAGNVAAARDVTLVPFILVGI-MYLILTGICTFFLRKVE 209 >gi|242237974|ref|YP_002986155.1| polar amino acid ABC transporter inner membrane subunit [Dickeya dadantii Ech703] gi|242130031|gb|ACS84333.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya dadantii Ech703] Length = 306 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 41/129 (31%), Positives = 77/129 (59%), Gaps = 3/129 (2%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I L+ +A+ AEI+R G++ V GQ EAA ALGL + T ++LPQA+R+I+P ++ Sbjct: 161 IGLTLVQSAYTAEIIRGGILGVDAGQFEAAAALGLPGYRRTWRIILPQALRAILPTGFNE 220 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF---MNR 387 ++L K +S+ + +L I N+T Q I ++++ YL+++ ++++ + R Sbjct: 221 IISLAKGTSVVYVLALPELFYTVQVIYNRTQQVIPLLMVATLWYLAITSVLSVLQYHVER 280 Query: 388 LNAKIALKE 396 A+ A++E Sbjct: 281 YVARGAVRE 289 >gi|258654440|ref|YP_003203596.1| polar amino acid ABC transporter inner membrane subunit [Nakamurella multipartita DSM 44233] gi|258557665|gb|ACV80607.1| polar amino acid ABC transporter, inner membrane subunit [Nakamurella multipartita DSM 44233] Length = 307 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 68/224 (30%), Positives = 108/224 (48%), Gaps = 20/224 (8%) Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233 RGL LT+ V VLG++L++ RLS + + +YI F G P Sbjct: 68 RGL---WLTVWVTVAAMVIGIVLGVILAVM--RLSPN---PIVNGVAWIYIWFFR--GTP 117 Query: 234 TLVLI-------ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286 LV I L + P QF + + + P + +AL AA++AEIVR Sbjct: 118 VLVQIIFWVFLGQLYKYISLGIPFGPQFLYFNTTELIPVLVGGLLALGLNEAAYMAEIVR 177 Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346 +G+ +V GQ EAA ALG+T K R ++LPQAMR I+PP ++ +++LK +SL Sbjct: 178 AGISSVDSGQTEAAEALGMTRLKVMRRIVLPQAMRIIVPPTGNETISMLKTTSLLSVAAI 237 Query: 347 ADLVSVGGTIINQTGQAIEIIL---IWMFIYLSLSIMIALFMNR 387 +L I + I +++ IW ++ S+ + F+ + Sbjct: 238 LELFGTVQLIYGSNYKQIPLLVVASIWYLVFTSVMSVGQYFLEK 281 Score = 37.4 bits (85), Expect = 3.7, Method: Compositional matrix adjust. Identities = 26/90 (28%), Positives = 43/90 (47%), Gaps = 15/90 (16%) Query: 85 YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144 ++ +L G T W+ + M+ ++G ++ RLS N +V + +Y+ FR P LV Sbjct: 62 FSPQVLRGLWLTVWVTVAAMVIGIVLGVILAVMRLSPNPIVNGVAWIYIWFFRGTPVLVQ 121 Query: 145 IFF------LYKSVLSVLPIPDHSIVLPFG 168 I F LYK + S+ +PFG Sbjct: 122 IIFWVFLGQLYKYI---------SLGIPFG 142 >gi|227820462|ref|YP_002824433.1| ABC transporter permease [Sinorhizobium fredii NGR234] gi|227339461|gb|ACP23680.1| putative permease component of ABC transporter [Sinorhizobium fredii NGR234] Length = 219 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 57/192 (29%), Positives = 95/192 (49%), Gaps = 17/192 (8%) Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV 262 FA L+R K + YI +I G+P L+++ L Y + + G F Sbjct: 37 FAVALARTSQLKPVRIAAASYIQ--IIQGIPVLMILFLSY---YGLSLAG-FEL------ 84 Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322 P ++ +++ Y + ++AEI R + AVP+ Q EA+ +L +T + R V+LPQAMR Sbjct: 85 -PPLIAAGASMTIYASGYLAEIWRGCIQAVPKQQWEASESLAMTRLQQYRYVILPQAMRI 143 Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL----IWMFIYLSLS 378 +PP + ++KN+S+ +GF +L G I N T Q + L ++ + LS Sbjct: 144 CLPPTVGFAVQVVKNTSITSIIGFVELARAGQLINNATFQPFRVFLAVAALYFVVCYPLS 203 Query: 379 IMIALFMNRLNA 390 + L RL+A Sbjct: 204 QLSRLLERRLHA 215 >gi|227495201|ref|ZP_03925517.1| amino acid ABC superfamily ATP binding cassette transporter, permease protein [Actinomyces coleocanis DSM 15436] gi|226831653|gb|EEH64036.1| amino acid ABC superfamily ATP binding cassette transporter, permease protein [Actinomyces coleocanis DSM 15436] Length = 314 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 43/110 (39%), Positives = 65/110 (59%), Gaps = 2/110 (1%) Query: 236 VLIALKYQLHFDKPVLGQF-NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294 +L L QL P +F F + +P M+L + L A++AEI+R+GL +V + Sbjct: 116 LLPVLYPQLSLGIPFGPEFVQFETKTYFTPMLMAL-VGLGLNEGAYLAEIIRAGLNSVDK 174 Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344 GQ EAA ALG+ R ++LPQ MR IIPPL ++ +++LK +SL A+ Sbjct: 175 GQWEAATALGMNRSIILRRIILPQTMRVIIPPLGNETISMLKTTSLVSAI 224 >gi|194435100|ref|ZP_03067337.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Shigella dysenteriae 1012] gi|194416662|gb|EDX32794.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Shigella dysenteriae 1012] gi|320181544|gb|EFW56462.1| Glutamate Aspartate transport system permease protein GltK [Shigella boydii ATCC 9905] gi|332087263|gb|EGI92396.1| general L-amino acid transport system permease protein aapM [Shigella boydii 5216-82] Length = 367 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 34/76 (44%), Positives = 53/76 (69%) Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335 + +A++AE+VR GL A+P+GQ EAA +L L + K LV+LPQA++ +IP L + + L Sbjct: 241 FQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQGLVILPQALKLVIPGLVNTIIALF 300 Query: 336 KNSSLAVAVGFADLVS 351 K++SL + +G DL S Sbjct: 301 KDTSLVIIIGLFDLFS 316 >gi|33592600|ref|NP_880244.1| putative inner membrane component of binding-protein-dependent transport system [Bordetella pertussis Tohama I] gi|33572246|emb|CAE41798.1| putative inner membrane component of binding-protein-dependent transport system [Bordetella pertussis Tohama I] Length = 223 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 54/172 (31%), Positives = 90/172 (52%), Gaps = 7/172 (4%) Query: 233 PTLVLIALKYQLHFDKPVLGQFNF------IGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286 P L AL + P+L Q F + G +SP + +AL + AA+ AE+ R Sbjct: 52 PVSALTALVIEFVRSTPLLVQMYFLFYVLPVTGWQMSP-LTTGILALGLHYAAYCAEVYR 110 Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346 +G+ AVPRGQ EAA AL L+ + V+LPQA+ ++P L + + + K++ L A+ Sbjct: 111 AGIEAVPRGQHEAATALNLSRWRTAVGVVLPQAIPPVVPALGNYLVAMFKDTPLLSAITV 170 Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 +L+ I + T + E + + ++L LS++ A + RL A++ L K Sbjct: 171 VELLQQSKIIGSTTFRYTEPLTLVGVLFLLLSLVAAWGVRRLEARLKLYGGK 222 >gi|323489287|ref|ZP_08094519.1| amino acid ABC transporter (permease) [Planococcus donghaensis MPA1U2] gi|323397174|gb|EGA89988.1| amino acid ABC transporter (permease) [Planococcus donghaensis MPA1U2] Length = 236 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 52/184 (28%), Positives = 92/184 (50%), Gaps = 34/184 (18%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 + PLL L +GLPTL G T+ P F + I S Sbjct: 79 RGTPLLVQLFILFYGLPTL-----------------------GITIDP-FPAAVIGFSLN 114 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 A+ +E++R+ ++++P+GQ EAA +G+++ ++ R V+LPQA R +PPL++ +++L+K Sbjct: 115 VGAYASEVIRAAILSIPKGQWEAAGTIGMSYTQSLRRVILPQASRVSLPPLSNTFISLVK 174 Query: 337 NSSLAVAVGFADLVSVGGTIINQT-------GQAIEIILIWMFIYLSLSIMIALFMNRLN 389 ++SLA + ++ V I GQA L++ I +LS++ NR + Sbjct: 175 DTSLASLILVTEMFRVAQQIAATNYEFLLLYGQA---ALLYWVICFALSLVQGRLENRFD 231 Query: 390 AKIA 393 I+ Sbjct: 232 RYIS 235 >gi|281180312|dbj|BAI56642.1| amino acid ABC transporter permease component [Escherichia coli SE15] Length = 368 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 63/220 (28%), Positives = 107/220 (48%), Gaps = 28/220 (12%) Query: 132 YVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV 191 Y+ V+ I PLVV + +Y L + D + R TLT+ + Sbjct: 126 YIAVWAVIYPLVVWWLMYGGFLGL----DR---------VETRQWGGLTLTLIIASVGIA 172 Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251 + GI+L+L R H + L +++I + G+P LI + + P+ Sbjct: 173 GALPWGILLAL-----GRRSHMPIVRILSVIFIEFWR--GVP---LITVLFMSSVMLPL- 221 Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311 F+ T + + + + + +A++AE+VR GL A+P+GQ EAA +L L + K Sbjct: 222 ----FMAEGTSIDKLIRALVGVILFQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQ 277 Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 LV+LPQA++ +IP L + + L K++SL + +G DL S Sbjct: 278 GLVILPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFS 317 >gi|226360988|ref|YP_002778766.1| cystine ABC transporter permease protein [Rhodococcus opacus B4] gi|226239473|dbj|BAH49821.1| cystine ABC transporter permease protein [Rhodococcus opacus B4] Length = 222 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 53/172 (30%), Positives = 92/172 (53%), Gaps = 14/172 (8%) Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALK 241 T+ + + SF +G+V++L L+R + L Y+S +I G P LV Sbjct: 20 TITMTIPLTIISFTIGLVIALLVA-LARISSIRPLSVLARFYVS--IIRGTPLLV----- 71 Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301 QL L QF G T+ P F + IA S + AE++R+ ++++P+GQ EAA Sbjct: 72 -QLFIVFYALPQF----GVTLEP-FPAAVIAFSLNVGGYAAEVIRAAILSIPKGQWEAAQ 125 Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353 +G+ + + ++LPQA R +PPL++ ++L+K++SLA + +L+ V Sbjct: 126 TIGMGYTTTLQRIVLPQATRVAVPPLSNTLISLVKDTSLASTILVTELLRVA 177 >gi|120608916|ref|YP_968594.1| polar amino acid ABC transporter inner membrane subunit [Acidovorax citrulli AAC00-1] gi|120587380|gb|ABM30820.1| amino acid ABC transporter membrane protein 2, PAAT family [Acidovorax citrulli AAC00-1] Length = 217 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 38/106 (35%), Positives = 65/106 (61%), Gaps = 1/106 (0%) Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316 + G VSP + + I L+ YT+A++AE+ R + A+PRGQ EA+ +L + + + R V+L Sbjct: 79 MAGFDVSP-WAAAAIGLTLYTSAYLAEVWRGCVQAIPRGQWEASSSLAMGYFQQMRHVVL 137 Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362 PQA+R + P + ++K +++A +GF DL +G + N T Q Sbjct: 138 PQAVRLAVAPTVGFSVQIVKGTAVASIIGFEDLTKLGSMLANATFQ 183 >gi|15890304|ref|NP_355976.1| ABC transporter, membrane spanning protein (amino acid) [Agrobacterium tumefaciens str. C58] gi|15158505|gb|AAK88761.1| ABC transporter, membrane spanning protein (amino acid) [Agrobacterium tumefaciens str. C58] Length = 219 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 37/103 (35%), Positives = 61/103 (59%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P ++ +++ YT+ ++AEI R + AVP+ Q EA+ +L LT + R V+LPQA+R Sbjct: 85 PPLIAAGASMTIYTSGYLAEIWRGCIQAVPKQQWEASESLALTRAQQYRYVILPQAIRIS 144 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 +PP + ++KN+S+A +GF +L G I N T Q + Sbjct: 145 LPPTVGFAVQVVKNTSIASIIGFVELARAGQLINNATFQPFRV 187 >gi|15803805|ref|NP_289839.1| putative transport system permease protein [Escherichia coli O157:H7 EDL933] gi|15833397|ref|NP_312170.1| transport system permease protein [Escherichia coli O157:H7 str. Sakai] gi|12517901|gb|AAG58399.1|AE005554_10 putative transport system permease protein [Escherichia coli O157:H7 str. EDL933] gi|13363616|dbj|BAB37566.1| putative transport system permease protein [Escherichia coli O157:H7 str. Sakai] Length = 368 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 36/96 (37%), Positives = 60/96 (62%) Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315 F+ T + + + + + +A++AE+VR GL A+P+GQ EAA +L L + K LV+ Sbjct: 222 FMAEGTSIDKLIRALVGVILFQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQGLVI 281 Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 LPQA++ +IP L + + L K++SL + +G DL S Sbjct: 282 LPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFS 317 >gi|311277768|ref|YP_003939999.1| polar amino acid ABC transporter, inner membrane subunit [Enterobacter cloacae SCF1] gi|308746963|gb|ADO46715.1| polar amino acid ABC transporter, inner membrane subunit [Enterobacter cloacae SCF1] Length = 367 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 34/76 (44%), Positives = 53/76 (69%) Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335 + +A++AE+VR GL A+P+GQ EAA +L L + K LV+LPQA++ +IP L + + L Sbjct: 241 FQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQGLVILPQALKLVIPGLVNTIIALF 300 Query: 336 KNSSLAVAVGFADLVS 351 K++SL + +G DL S Sbjct: 301 KDTSLVIIIGLFDLFS 316 >gi|293449593|ref|ZP_06664014.1| general L-amino acid transport system permease [Escherichia coli B088] gi|291322683|gb|EFE62112.1| general L-amino acid transport system permease [Escherichia coli B088] gi|320202180|gb|EFW76755.1| Glutamate Aspartate transport system permease protein GltK [Escherichia coli EC4100B] gi|323946883|gb|EGB42899.1| inner membrane transport system [Escherichia coli H120] Length = 367 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 34/76 (44%), Positives = 53/76 (69%) Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335 + +A++AE+VR GL A+P+GQ EAA +L L + K LV+LPQA++ +IP L + + L Sbjct: 241 FQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQGLVILPQALKLVIPGLVNTIIALF 300 Query: 336 KNSSLAVAVGFADLVS 351 K++SL + +G DL S Sbjct: 301 KDTSLVIIIGLFDLFS 316 >gi|218691564|ref|YP_002399776.1| amino-acid ABC transporter membrane protein [Escherichia coli ED1a] gi|218429128|emb|CAR10071.2| amino-acid transporter subunit ; membrane component of ABC superfamily [Escherichia coli ED1a] Length = 367 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 63/220 (28%), Positives = 107/220 (48%), Gaps = 28/220 (12%) Query: 132 YVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV 191 Y+ V+ I PLVV + +Y L + D + R TLT+ + Sbjct: 125 YIAVWAVIYPLVVWWLMYGGFLGL----DR---------VETRQWGGLTLTLIIASVGIA 171 Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251 + GI+L+L R H + L +++I + G+P LI + + P+ Sbjct: 172 GALPWGILLAL-----GRRSHMPIVRILSVIFIEFWR--GVP---LITVLFMSSVMLPL- 220 Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311 F+ T + + + + + +A++AE+VR GL A+P+GQ EAA +L L + K Sbjct: 221 ----FMAEGTSIDKLIRALVGVILFQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQ 276 Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 LV+LPQA++ +IP L + + L K++SL + +G DL S Sbjct: 277 GLVILPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFS 316 >gi|229916002|ref|YP_002884648.1| polar amino acid ABC transporter inner membrane subunit [Exiguobacterium sp. AT1b] gi|229467431|gb|ACQ69203.1| polar amino acid ABC transporter, inner membrane subunit [Exiguobacterium sp. AT1b] Length = 232 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 56/175 (32%), Positives = 92/175 (52%), Gaps = 20/175 (11%) Query: 221 LLYISTFLIF---GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL---S 274 L Y STF I G+P L+++ + Y F FIG EF +L A+ S Sbjct: 60 LRYPSTFYISFMRGVPILIILFILYS---------GFPFIG-----IEFAALTAAILGFS 105 Query: 275 CYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNL 334 +AA+IAEI+RS + AV GQ+EAA +LG+ + V+LPQA R +PPL++ +L+L Sbjct: 106 LNSAAYIAEIIRSSIRAVDDGQVEAARSLGMGKWLTLKGVVLPQATRIALPPLSNVFLDL 165 Query: 335 LKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 +K SSLA + ++ + + + + + ++ IY ++ ++ F L Sbjct: 166 IKASSLAAMITVPEIFNKAKIVGGREFDYMTVYIVVALIYWAICTFMSFFQEWLE 220 >gi|118464237|ref|YP_879359.1| amino acid ABC transporter permease [Mycobacterium avium 104] gi|118165524|gb|ABK66421.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family protein [Mycobacterium avium 104] Length = 598 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 47/140 (33%), Positives = 82/140 (58%), Gaps = 5/140 (3%) Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316 +GG T + + AL AA+I EI+RSG+ +V GQ+EA+ ALG ++ A RLV++ Sbjct: 437 VGGLTNNNPYPLGIAALGMMAAAYIGEILRSGIQSVDPGQLEASRALGFSYATAMRLVVV 496 Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA----DLVSVGGTIINQTGQAIEIILIWMF 372 PQ +R ++P L +Q++ LLK S+L +G +L VG + +TG + ++ Sbjct: 497 PQGVRRVLPALVNQFIALLKASALVYFLGLVADQRELFQVGRDLNAETGN-LSPLVAAGA 555 Query: 373 IYLSLSIMIALFMNRLNAKI 392 YL L++ + +N ++A++ Sbjct: 556 CYLILTVPLTHLVNMIDARL 575 Score = 36.6 bits (83), Expect = 6.5, Method: Compositional matrix adjust. Identities = 18/57 (31%), Positives = 30/57 (52%) Query: 87 TAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143 T + G NT L FS + ++G ++ +S + + W RVY +VFR +P +V Sbjct: 368 TLLRTGLPNTLILTFSASVIGLVLGMVLAVAGISHARWLRWPARVYTDVFRGLPEVV 424 >gi|157158180|ref|YP_001464745.1| His/Glu/Gln/Arg/opine ABC transporter permease [Escherichia coli E24377A] gi|193066457|ref|ZP_03047502.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Escherichia coli E22] gi|194430236|ref|ZP_03062733.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Escherichia coli B171] gi|218555835|ref|YP_002388748.1| amino-acid ABC transporter membrane protein [Escherichia coli IAI1] gi|218696970|ref|YP_002404637.1| amino-acid transporter subunit ; membrane component of ABC superfamily [Escherichia coli 55989] gi|260846075|ref|YP_003223853.1| putative transport system permease protein [Escherichia coli O103:H2 str. 12009] gi|307314972|ref|ZP_07594560.1| polar amino acid ABC transporter, inner membrane subunit [Escherichia coli W] gi|331670096|ref|ZP_08370941.1| inner membrane amino-acid ABC transporter permease protein YhdY [Escherichia coli TA271] gi|331679344|ref|ZP_08380016.1| putative transport system permease protein [Escherichia coli H591] gi|157080210|gb|ABV19918.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Escherichia coli E24377A] gi|192925886|gb|EDV80535.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Escherichia coli E22] gi|194411707|gb|EDX28032.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Escherichia coli B171] gi|218353702|emb|CAU99966.1| amino-acid transporter subunit ; membrane component of ABC superfamily [Escherichia coli 55989] gi|218362603|emb|CAR00228.1| amino-acid transporter subunit ; membrane component of ABC superfamily [Escherichia coli IAI1] gi|257761222|dbj|BAI32719.1| putative transport system permease protein [Escherichia coli O103:H2 str. 12009] gi|306905555|gb|EFN36087.1| polar amino acid ABC transporter, inner membrane subunit [Escherichia coli W] gi|315062569|gb|ADT76896.1| predicted amino-acid transporter subunit [Escherichia coli W] gi|323376844|gb|ADX49112.1| polar amino acid ABC transporter, inner membrane subunit [Escherichia coli KO11] gi|331063009|gb|EGI34923.1| inner membrane amino-acid ABC transporter permease protein YhdY [Escherichia coli TA271] gi|331073409|gb|EGI44732.1| putative transport system permease protein [Escherichia coli H591] Length = 367 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 34/76 (44%), Positives = 53/76 (69%) Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335 + +A++AE+VR GL A+P+GQ EAA +L L + K LV+LPQA++ +IP L + + L Sbjct: 241 FQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQGLVILPQALKLVIPGLVNTIIALF 300 Query: 336 KNSSLAVAVGFADLVS 351 K++SL + +G DL S Sbjct: 301 KDTSLVIIIGLFDLFS 316 >gi|297518226|ref|ZP_06936612.1| putative transport system permease protein [Escherichia coli OP50] Length = 227 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 36/96 (37%), Positives = 60/96 (62%) Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315 F+ T + + + + + +A++AE+VR GL A+P+GQ EAA +L L + K LV+ Sbjct: 81 FMAEGTSIDKLIRALVGVILFQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQGLVI 140 Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 LPQA++ +IP L + + L K++SL + +G DL S Sbjct: 141 LPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFS 176 >gi|74313797|ref|YP_312216.1| putative transport system permease [Shigella sonnei Ss046] gi|73857274|gb|AAZ89981.1| putative transport system permease protein [Shigella sonnei Ss046] gi|332086438|gb|EGI91585.1| general L-amino acid transport system permease protein aapM [Shigella dysenteriae 155-74] Length = 368 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 34/76 (44%), Positives = 53/76 (69%) Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335 + +A++AE+VR GL A+P+GQ EAA +L L + K LV+LPQA++ +IP L + + L Sbjct: 242 FQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQGLVILPQALKLVIPGLVNTIIALF 301 Query: 336 KNSSLAVAVGFADLVS 351 K++SL + +G DL S Sbjct: 302 KDTSLVIIIGLFDLFS 317 >gi|332098839|gb|EGJ03796.1| general L-amino acid transport system permease protein aapM [Shigella boydii 3594-74] Length = 367 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 34/76 (44%), Positives = 53/76 (69%) Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335 + +A++AE+VR GL A+P+GQ EAA +L L + K LV+LPQA++ +IP L + + L Sbjct: 241 FQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQGLVILPQALKLVIPGLVNTIIALF 300 Query: 336 KNSSLAVAVGFADLVS 351 K++SL + +G DL S Sbjct: 301 KDTSLVIIIGLFDLFS 316 >gi|168764867|ref|ZP_02789874.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Escherichia coli O157:H7 str. EC4501] gi|217327153|ref|ZP_03443236.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Escherichia coli O157:H7 str. TW14588] gi|189365197|gb|EDU83613.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Escherichia coli O157:H7 str. EC4501] gi|217319520|gb|EEC27945.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Escherichia coli O157:H7 str. TW14588] gi|326347536|gb|EGD71261.1| Glutamate Aspartate transport system permease protein GltK [Escherichia coli O157:H7 str. 1044] Length = 367 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 36/96 (37%), Positives = 60/96 (62%) Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315 F+ T + + + + + +A++AE+VR GL A+P+GQ EAA +L L + K LV+ Sbjct: 221 FMAEGTSIDKLIRALVGVILFQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQGLVI 280 Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 LPQA++ +IP L + + L K++SL + +G DL S Sbjct: 281 LPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFS 316 >gi|82778576|ref|YP_404925.1| putative transport system permease protein [Shigella dysenteriae Sd197] gi|309785601|ref|ZP_07680232.1| general L-amino acid transport system permease protein aapM [Shigella dysenteriae 1617] gi|81242724|gb|ABB63434.1| putative transport system permease protein [Shigella dysenteriae Sd197] gi|308926721|gb|EFP72197.1| general L-amino acid transport system permease protein aapM [Shigella dysenteriae 1617] Length = 368 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 36/96 (37%), Positives = 60/96 (62%) Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315 F+ T + + + + + +A++AE+VR GL A+P+GQ EAA +L L + K LV+ Sbjct: 222 FMAEGTSIDKLIRALVGVILFQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQGLVI 281 Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 LPQA++ +IP L + + L K++SL + +G DL S Sbjct: 282 LPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFS 317 >gi|82545640|ref|YP_409587.1| transport system permease protein [Shigella boydii Sb227] gi|81247051|gb|ABB67759.1| putative transport system permease protein [Shigella boydii Sb227] Length = 368 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 34/76 (44%), Positives = 53/76 (69%) Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335 + +A++AE+VR GL A+P+GQ EAA +L L + K LV+LPQA++ +IP L + + L Sbjct: 242 FQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQGLVILPQALKLVIPGLVNTIIALF 301 Query: 336 KNSSLAVAVGFADLVS 351 K++SL + +G DL S Sbjct: 302 KDTSLVIIIGLFDLFS 317 >gi|258647026|ref|ZP_05734495.1| glutamine ABC transporter, permease protein [Dialister invisus DSM 15470] gi|260404467|gb|EEW98014.1| glutamine ABC transporter, permease protein [Dialister invisus DSM 15470] Length = 215 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 56/225 (24%), Positives = 107/225 (47%), Gaps = 34/225 (15%) Query: 183 MDTNAKIFVFSFVLGIVLSLF--ATRLSR--HFHEKTG------KALPLLYISTFLIFGL 232 + +A+IF+F+ VL + L + R+S+ F + G + PL+ F+ +GL Sbjct: 15 LGVSAQIFIFTIVLSLPLGMLLAMVRISKVGLFRQAAGAYIYLMRGTPLMLQIMFIYYGL 74 Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292 P L FD + +F + +A AA+ AEI R G+ ++ Sbjct: 75 P----------LIFDLQI-------------SDFPAAILAFVANYAAYFAEIFRGGIQSI 111 Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352 +GQ E A LG T+++ ++LPQ ++ +IPPL ++ + LLK++SL + DL+ V Sbjct: 112 SKGQYEGAKVLGFTYKQTMWHIILPQVVKRVIPPLGNETITLLKDTSLVYILAMNDLMRV 171 Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 + + ++ +F YL + ++ + + + A+ E+ Sbjct: 172 TRAFVQRDFDTTPFLVAGVF-YLVCTAVLTKILTYVENRYAVYEE 215 >gi|227822265|ref|YP_002826236.1| predicted amino acid ABC transporter, permease protein [Sinorhizobium fredii NGR234] gi|227341265|gb|ACP25483.1| predicted amino acid ABC transporter, permease protein [Sinorhizobium fredii NGR234] Length = 267 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 53/184 (28%), Positives = 94/184 (51%), Gaps = 12/184 (6%) Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265 RLS + + + LP L + +GL LV L L +++PV + N Sbjct: 86 RLSANIYTTIFRGLPELLTLFIVYYGLQILVQQFLA-TLGYEEPV--EIN---------A 133 Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F++ IAL +A+ +E++ S A+P+GQ EA ALG K RL++LPQ +R +P Sbjct: 134 FVAGMIALGVVFSAYCSEVLLSAFKAIPQGQYEAGDALGFHRGKTMRLIILPQLVRIALP 193 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 L + ++ LLK+++L +G D++ G T QA + + ++L L+++ ++ Sbjct: 194 GLGNLWMALLKDTALVSVIGLQDILRQTGQAARMTKQAFQFFGVACVLFLVLAMISSVVF 253 Query: 386 NRLN 389 + L Sbjct: 254 SALE 257 >gi|261339908|ref|ZP_05967766.1| amino acid ABC transporter, permease protein [Enterobacter cancerogenus ATCC 35316] gi|288317819|gb|EFC56757.1| amino acid ABC transporter, permease protein [Enterobacter cancerogenus ATCC 35316] Length = 307 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 43/153 (28%), Positives = 83/153 (54%), Gaps = 3/153 (1%) Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305 F + G+F I V +F + + L+ +A+ AEIVR G + V GQ EAA ALGL Sbjct: 130 FTDILWGRFETI---NVLGQFSTAVVGLTLVQSAYTAEIVRGGFLGVDHGQYEAAAALGL 186 Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365 + T ++LPQA+R+I+P ++ ++L K +++ + +L I N+T + I Sbjct: 187 PAWRRTVRIILPQALRTILPSGFNEIISLAKGTAMVYVLAMPELFYTIQMIYNRTQEVIP 246 Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 ++++ YL ++ +++ + + +A E++ Sbjct: 247 LLMVGAVWYLVITTVLSAIQHVVERGLARSERR 279 >gi|209920743|ref|YP_002294827.1| amino acid ABC transporter permease [Escherichia coli SE11] gi|209914002|dbj|BAG79076.1| amino acid ABC transporter permease component [Escherichia coli SE11] Length = 368 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 34/76 (44%), Positives = 53/76 (69%) Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335 + +A++AE+VR GL A+P+GQ EAA +L L + K LV+LPQA++ +IP L + + L Sbjct: 242 FQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQGLVILPQALKLVIPGLVNTIIALF 301 Query: 336 KNSSLAVAVGFADLVS 351 K++SL + +G DL S Sbjct: 302 KDTSLVIIIGLFDLFS 317 >gi|157148850|ref|YP_001456169.1| hypothetical protein CKO_04683 [Citrobacter koseri ATCC BAA-895] gi|157086055|gb|ABV15733.1| hypothetical protein CKO_04683 [Citrobacter koseri ATCC BAA-895] Length = 368 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 34/76 (44%), Positives = 53/76 (69%) Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335 + +A++AE+VR GL A+P+GQ EAA +L L + K LV+LPQA++ +IP L + + L Sbjct: 242 FQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQGLVILPQALKLVIPGLVNTIIALF 301 Query: 336 KNSSLAVAVGFADLVS 351 K++SL + +G DL S Sbjct: 302 KDTSLVIIIGLFDLFS 317 >gi|170740013|ref|YP_001768668.1| polar amino acid ABC transporter inner membrane subunit [Methylobacterium sp. 4-46] gi|168194287|gb|ACA16234.1| polar amino acid ABC transporter, inner membrane subunit [Methylobacterium sp. 4-46] Length = 216 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 42/139 (30%), Positives = 75/139 (53%), Gaps = 1/139 (0%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G ++ P + + + LS + +AF+ EI R + VPRGQ +AA ALGL + T LV++PQ Sbjct: 79 GLSIDP-WGAAALGLSLHASAFLGEIWRGAIETVPRGQWQAATALGLGYWNRTALVIVPQ 137 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378 A+R + P + L+K +SLA +GF ++ I N T + + + +Y + Sbjct: 138 AVRIAVAPTIGFLVQLIKATSLASIIGFVEITRAAQVINNATFRPFTLFGLVALVYFVIC 197 Query: 379 IMIALFMNRLNAKIALKEK 397 ++ + R+ K+A+ + Sbjct: 198 WPLSAYSRRIERKLAVASR 216 >gi|33596591|ref|NP_884234.1| putative inner membrane component of binding-protein-dependent transport system [Bordetella parapertussis 12822] gi|33573292|emb|CAE37273.1| putative inner membrane component of binding-protein-dependent transport system [Bordetella parapertussis] Length = 213 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 38/118 (32%), Positives = 69/118 (58%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P + + L A+ AE+VR ++AVP GQ EAA+AL LT + ++LPQA+ ++ Sbjct: 82 PALLVGIVVLGANAGAYGAEVVRGAILAVPAGQREAAVALNLTRARTIWRIILPQAVPAM 141 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 +PP + + LLKN++L + DL G + ++T + EI + + +Y +++++I Sbjct: 142 LPPTGNLLIELLKNTALVSLITITDLTFRGQLLRSETLRTTEIFTLVLLLYFAVALVI 199 >gi|300718664|ref|YP_003743467.1| L-amino acid ABC transporter, permease protein [Erwinia billingiae Eb661] gi|299064500|emb|CAX61620.1| L-amino acid ABC transporter, permease protein [Erwinia billingiae Eb661] Length = 366 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 34/76 (44%), Positives = 53/76 (69%) Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335 + +A++AE+VR GL A+P+GQ EAA +L L + K LV+LPQA++ +IP L + + L Sbjct: 240 FQSAYVAEVVRGGLQALPKGQTEAAESLALGYWKTQGLVILPQALKLVIPGLVNTIIALF 299 Query: 336 KNSSLAVAVGFADLVS 351 K++SL + +G DL S Sbjct: 300 KDTSLVIIIGLFDLFS 315 >gi|306816386|ref|ZP_07450518.1| amino-acid transporter subunit ; membrane component of ABC superfamily protein [Escherichia coli NC101] gi|222034986|emb|CAP77729.1| Inner membrane amino-acid ABC transporter permease [Escherichia coli LF82] gi|305849951|gb|EFM50410.1| amino-acid transporter subunit ; membrane component of ABC superfamily protein [Escherichia coli NC101] gi|312947828|gb|ADR28655.1| amino-acid transporter subunit; membrane component of ABC superfamily protein [Escherichia coli O83:H1 str. NRG 857C] Length = 367 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 63/220 (28%), Positives = 107/220 (48%), Gaps = 28/220 (12%) Query: 132 YVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV 191 Y+ V+ I PLVV + +Y L + D + R TLT+ + Sbjct: 125 YIAVWAVIYPLVVWWLMYGGFLGL----DR---------VETRQWGGLTLTLIIASVGIA 171 Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251 + GI+L+L R H + L +++I + G+P LI + + P+ Sbjct: 172 GALPWGILLAL-----GRRSHMPIVRILSVIFIEFWR--GVP---LITVLFMSSVMLPL- 220 Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311 F+ T + + + + + +A++AE+VR GL A+P+GQ EAA +L L + K Sbjct: 221 ----FMAEGTSIDKLIRALVGVILFQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQ 276 Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 LV+LPQA++ +IP L + + L K++SL + +G DL S Sbjct: 277 GLVILPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFS 316 >gi|191169154|ref|ZP_03030912.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Escherichia coli B7A] gi|256018816|ref|ZP_05432681.1| amino acid ABC transporter permease component [Shigella sp. D9] gi|260857398|ref|YP_003231289.1| putative transport system permease protein [Escherichia coli O26:H11 str. 11368] gi|190900796|gb|EDV60587.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Escherichia coli B7A] gi|257756047|dbj|BAI27549.1| putative transport system permease protein [Escherichia coli O26:H11 str. 11368] gi|323154325|gb|EFZ40527.1| general L-amino acid transport system permease protein aapM [Escherichia coli EPECa14] Length = 367 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 34/76 (44%), Positives = 53/76 (69%) Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335 + +A++AE+VR GL A+P+GQ EAA +L L + K LV+LPQA++ +IP L + + L Sbjct: 241 FQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQGLVILPQALKLVIPGLVNTIIALF 300 Query: 336 KNSSLAVAVGFADLVS 351 K++SL + +G DL S Sbjct: 301 KDTSLVIIIGLFDLFS 316 >gi|189184716|ref|YP_001938501.1| probable glutamine transport system permease protein GlnP [Orientia tsutsugamushi str. Ikeda] gi|189181487|dbj|BAG41267.1| probable glutamine transport system permease protein GlnP [Orientia tsutsugamushi str. Ikeda] Length = 205 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 55/180 (30%), Positives = 99/180 (55%), Gaps = 23/180 (12%) Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230 L+N L P +T+ F F++ ++L++ +R+S++ K G + YIS F Sbjct: 2 LSNIALGIP-VTLQYAFSAVCFGFIIAVLLTV--SRMSKYKLLKFGANI---YISVFR-- 53 Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290 G P ++ + + Y F+F +S F + + S + A++AEI++SG+ Sbjct: 54 GTPLIIQLYVIY-----------FSF----KLSNVFYAGVLVFSLNSGAYVAEIIKSGIN 98 Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 +V + Q+EAA+AL + + + ++LPQA+R IIP L ++ +NLLK SS+ +G DL+ Sbjct: 99 SVDKWQIEAALALNIPYFYIMKDIVLPQALRKIIPSLVNEVINLLKESSIISVLGGMDLM 158 >gi|332102248|gb|EGJ05594.1| his/Glu/Gln/Arg/opine ABC transporter permease [Shigella sp. D9] Length = 368 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 34/76 (44%), Positives = 53/76 (69%) Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335 + +A++AE+VR GL A+P+GQ EAA +L L + K LV+LPQA++ +IP L + + L Sbjct: 242 FQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQGLVILPQALKLVIPGLVNTIIALF 301 Query: 336 KNSSLAVAVGFADLVS 351 K++SL + +G DL S Sbjct: 302 KDTSLVIIIGLFDLFS 317 >gi|30064599|ref|NP_838770.1| putative transport system permease protein [Shigella flexneri 2a str. 2457T] gi|56480303|ref|NP_709065.2| putative transport system permease protein [Shigella flexneri 2a str. 301] gi|30042858|gb|AAP18581.1| putative transport system permease protein [Shigella flexneri 2a str. 2457T] gi|56383854|gb|AAN44772.2| putative transport system permease protein [Shigella flexneri 2a str. 301] gi|313648621|gb|EFS13062.1| general L-amino acid transport system permease protein aapM [Shigella flexneri 2a str. 2457T] gi|324119450|gb|EGC13333.1| inner membrane transport system [Escherichia coli E1167] Length = 367 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 34/76 (44%), Positives = 53/76 (69%) Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335 + +A++AE+VR GL A+P+GQ EAA +L L + K LV+LPQA++ +IP L + + L Sbjct: 241 FQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQGLVILPQALKLVIPGLVNTIIALF 300 Query: 336 KNSSLAVAVGFADLVS 351 K++SL + +G DL S Sbjct: 301 KDTSLVIIIGLFDLFS 316 >gi|86138395|ref|ZP_01056969.1| amino acid ABC transporter, permease protein [Roseobacter sp. MED193] gi|85824920|gb|EAQ45121.1| amino acid ABC transporter, permease protein [Roseobacter sp. MED193] Length = 215 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 58/188 (30%), Positives = 95/188 (50%), Gaps = 20/188 (10%) Query: 191 VFSFVLGIVLSLFAT--RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248 V + +LG++ ++ T RLSR + + L Y+S F G P L+ + + L+F Sbjct: 25 VLTAILGLICAMLGTAARLSRF---RVLRFLGAAYVSVFR--GTPALIQL---FILYFGG 76 Query: 249 PVLG-QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307 P +G Q + F + I L A++ E +R +I+V +GQ EAA LG++ Sbjct: 77 PQIGIQLD---------AFEAGVIGLGVNVGAYMTETMRGAIISVDKGQGEAARTLGMSK 127 Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367 +A R V+LPQAMR +I PL L+K+++L A+ +L I T + E+ Sbjct: 128 WQAMRNVILPQAMRLMIRPLGVNLNTLIKSTALVAAISVVELTYTAQRYIGSTYKPFEMF 187 Query: 368 LIWMFIYL 375 LI +Y+ Sbjct: 188 LIAGLLYM 195 >gi|227524319|ref|ZP_03954368.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus hilgardii ATCC 8290] gi|227088550|gb|EEI23862.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus hilgardii ATCC 8290] Length = 214 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 47/182 (25%), Positives = 91/182 (50%), Gaps = 25/182 (13%) Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269 + ++ + PLL F+ +GLP + +I +Y +L Sbjct: 53 NLYDWLMRGTPLLLQLIFVFYGLPVIGIIFERYD-----------------------AAL 89 Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329 + + YTA F AEI R G +VPRGQ E+A L L++ + R +++PQ + ++P + + Sbjct: 90 FAFILNYTAYF-AEIFRGGFQSVPRGQFESACVLRLSYGQTIRKIIIPQVFKIVLPSIGN 148 Query: 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 + +NL+K+SSL +G DL+ G + + ++L+ + IYL+L+ + + + + Sbjct: 149 EVINLVKDSSLVYVIGLGDLLRAGNVATARDVTLLPLVLVGI-IYLALTAICTIVLKVIE 207 Query: 390 AK 391 + Sbjct: 208 KR 209 >gi|295397439|ref|ZP_06807526.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Aerococcus viridans ATCC 11563] gi|294974340|gb|EFG50080.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Aerococcus viridans ATCC 11563] Length = 555 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 45/143 (31%), Positives = 80/143 (55%), Gaps = 5/143 (3%) Query: 254 FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313 FNF +S F +L I +S T A++AE++R G+ +V +GQ EAA A+G+ H + Sbjct: 399 FNF----QMSTMFAALLI-VSINTGAYLAEVIRGGITSVDKGQTEAARAIGMNHYQTMTT 453 Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI 373 ++LPQA+RSI+P L ++++ +K++S+ + +L V + T + LI I Sbjct: 454 IVLPQAIRSILPALGNEFVINIKDTSVLNVIAVTELFFVTKSAAGSTYLTFQTFLITAII 513 Query: 374 YLSLSIMIALFMNRLNAKIALKE 396 Y L+ +N + ++A K+ Sbjct: 514 YFVLTFTTTRVLNFIENRMAGKK 536 >gi|292670513|ref|ZP_06603939.1| amino acid ABC superfamily ATP binding cassette transporter, permease protein [Selenomonas noxia ATCC 43541] gi|292647923|gb|EFF65895.1| amino acid ABC superfamily ATP binding cassette transporter, permease protein [Selenomonas noxia ATCC 43541] Length = 247 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 43/117 (36%), Positives = 65/117 (55%), Gaps = 2/117 (1%) Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 A+I+E+ R+ AVPRGQ EAA++ GLT +A R V+L Q +P + +NLLK Sbjct: 102 GAYISEVFRAAYSAVPRGQYEAAVSAGLTPFQAFRHVMLGQTAIIALPNFGNAAINLLKE 161 Query: 338 SSLAVAVGFADLVSVGGTIINQT--GQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 +SLA +G DL+ G II Q IEI L M +Y + +++ + L ++ Sbjct: 162 ASLAYTIGLIDLIGKGNLIIAQNFGAYGIEIYLACMLVYWVMVLLLEQVFHWLEKRL 218 >gi|293416695|ref|ZP_06659334.1| inner membrane amino-acid ABC transporter permease yhdY [Escherichia coli B185] gi|331654869|ref|ZP_08355869.1| inner membrane amino-acid ABC transporter permease protein YhdY [Escherichia coli M718] gi|291432051|gb|EFF05034.1| inner membrane amino-acid ABC transporter permease yhdY [Escherichia coli B185] gi|331048251|gb|EGI20328.1| inner membrane amino-acid ABC transporter permease protein YhdY [Escherichia coli M718] Length = 367 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 34/76 (44%), Positives = 53/76 (69%) Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335 + +A++AE+VR GL A+P+GQ EAA +L L + K LV+LPQA++ +IP L + + L Sbjct: 241 FQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQGLVILPQALKLVIPGLVNTIIALF 300 Query: 336 KNSSLAVAVGFADLVS 351 K++SL + +G DL S Sbjct: 301 KDTSLVIIIGLFDLFS 316 >gi|325062201|gb|ADY65891.1| amino acid ABC transporter, membrane spanning protein [Agrobacterium sp. H13-3] Length = 219 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 37/103 (35%), Positives = 61/103 (59%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P ++ +++ YT+ ++AEI R + AVP+ Q EA+ +L LT + R V+LPQA+R Sbjct: 85 PPLIAAGASMTIYTSGYLAEIWRGCIQAVPKQQWEASESLALTRAQQYRYVILPQAIRIS 144 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 +PP + ++KN+S+A +GF +L G I N T Q + Sbjct: 145 LPPTVGFAVQVVKNTSIASIIGFVELARAGQLINNATFQPFRV 187 >gi|324115126|gb|EGC09090.1| inner membrane transport system [Escherichia fergusonii B253] Length = 367 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 36/96 (37%), Positives = 60/96 (62%) Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315 F+ T + + + + + +A++AE+VR GL A+P+GQ EAA +L L + K LV+ Sbjct: 221 FMAEGTSIDKLIRALVGVILFQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQGLVI 280 Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 LPQA++ +IP L + + L K++SL + +G DL S Sbjct: 281 LPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFS 316 >gi|323979010|gb|EGB74088.1| inner membrane transport system [Escherichia coli TW10509] Length = 367 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 36/96 (37%), Positives = 60/96 (62%) Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315 F+ T + + + + + +A++AE+VR GL A+P+GQ EAA +L L + K LV+ Sbjct: 221 FMAEGTSIDKLIRALVGVILFQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQGLVI 280 Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 LPQA++ +IP L + + L K++SL + +G DL S Sbjct: 281 LPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFS 316 >gi|312170820|emb|CBX79080.1| putative ABC transport system, inner membrane component [Erwinia amylovora ATCC BAA-2158] Length = 368 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 34/76 (44%), Positives = 53/76 (69%) Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335 + +A++AE+VR GL A+P+GQ EAA +L L + K LV+LPQA++ +IP L + + L Sbjct: 242 FQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQGLVILPQALKLVIPGLVNTIIALF 301 Query: 336 KNSSLAVAVGFADLVS 351 K++SL + +G DL S Sbjct: 302 KDTSLVIIIGLFDLFS 317 >gi|331649071|ref|ZP_08350159.1| inner membrane amino-acid ABC transporter permease protein YhdY [Escherichia coli M605] gi|330909321|gb|EGH37835.1| glutamate Aspartate transport system permease protein GltK [Escherichia coli AA86] gi|331042818|gb|EGI14960.1| inner membrane amino-acid ABC transporter permease protein YhdY [Escherichia coli M605] Length = 367 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 63/220 (28%), Positives = 107/220 (48%), Gaps = 28/220 (12%) Query: 132 YVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV 191 Y+ V+ I PLVV + +Y L + D + R TLT+ + Sbjct: 125 YIAVWAVIYPLVVWWLMYGGFLGL----DR---------VETRQWGGLTLTLIIASVGIA 171 Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251 + GI+L+L R H + L +++I + G+P LI + + P+ Sbjct: 172 GALPWGILLAL-----GRRSHMPIVRILSVIFIEFWR--GVP---LITVLFMSSVMLPL- 220 Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311 F+ T + + + + + +A++AE+VR GL A+P+GQ EAA +L L + K Sbjct: 221 ----FMAEGTSIDKLIRALVGVILFQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQ 276 Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 LV+LPQA++ +IP L + + L K++SL + +G DL S Sbjct: 277 GLVILPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFS 316 >gi|260434995|ref|ZP_05788965.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Synechococcus sp. WH 8109] gi|260412869|gb|EEX06165.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Synechococcus sp. WH 8109] Length = 324 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 42/116 (36%), Positives = 68/116 (58%), Gaps = 3/116 (2%) Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339 +IAE VR GL A+P Q EAA LGL+ R+ +LV+LPQA+R +P LT+Q + LL+N+S Sbjct: 202 YIAEDVRGGLQAIPPTQREAAAVLGLSPRQVLQLVVLPQALRVALPSLTNQAVGLLQNTS 261 Query: 340 LAVAVGFADLVSVGGTIINQT---GQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 L +G +L+ + +++ G+ +E+ L +Y +AL L ++ Sbjct: 262 LMAILGLVELLGISRSLLANPAFIGRYLEVYLWLAAVYWLACTAMALLARHLEVQL 317 >gi|258405417|ref|YP_003198159.1| polar amino acid ABC transporter, inner membrane subunit [Desulfohalobium retbaense DSM 5692] gi|257797644|gb|ACV68581.1| polar amino acid ABC transporter, inner membrane subunit [Desulfohalobium retbaense DSM 5692] Length = 360 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 46/182 (25%), Positives = 92/182 (50%), Gaps = 25/182 (13%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 + PLL F+ +GLP++ G T+SP +L Y Sbjct: 199 RGTPLLLQLFFIYYGLPSM-----------------------GVTLSPLVAALLGLGLNY 235 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 +A ++AEI+R + ++ GQMEAA ALG+T+ +A R V++PQ + ++PP+ ++++ L+K Sbjct: 236 SA-YLAEIIRGAIQSIDSGQMEAAKALGMTYGQAMRRVIIPQTYKRLMPPVGNEFIALIK 294 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 +++L + +L+ + N T I ++++ IYL + + ++ ++ E Sbjct: 295 DTALVSTIAMVELMRAADQLFN-TYFDITVLVLAAIIYLLFTSAFTVTFEKIEKRVGAYE 353 Query: 397 KK 398 + Sbjct: 354 NR 355 >gi|227115098|ref|ZP_03828754.1| putative ABC transporter, permease [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 314 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 41/135 (30%), Positives = 77/135 (57%), Gaps = 3/135 (2%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 +F + L+ +A+ AEI+R G++ V GQ EA+ ALGL + T ++LPQA+RSI+ Sbjct: 161 QFSVAVLGLTLVQSAYTAEIIRGGILGVDAGQFEASAALGLPSSRRTVRIILPQALRSIL 220 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL---IWMFIYLSLSIMI 381 P ++ ++L K +S+ + +L I N+T Q I +++ IW + ++ +I Sbjct: 221 PTGFNEIISLAKGTSIVYVLALPELFYTVQVIYNRTQQVIPLLMVATIWYLLITTVLSVI 280 Query: 382 ALFMNRLNAKIALKE 396 ++ R ++ A++E Sbjct: 281 QYYVERYVSRGAVRE 295 >gi|218706885|ref|YP_002414404.1| amino-acid ABC transporter membrane protein [Escherichia coli UMN026] gi|293406872|ref|ZP_06650798.1| polar amino acid ABC transporter [Escherichia coli FVEC1412] gi|298382613|ref|ZP_06992210.1| general L-amino acid transport system permease [Escherichia coli FVEC1302] gi|218433982|emb|CAR14899.1| amino-acid transporter subunit ; membrane component of ABC superfamily [Escherichia coli UMN026] gi|291426878|gb|EFE99910.1| polar amino acid ABC transporter [Escherichia coli FVEC1412] gi|298277753|gb|EFI19269.1| general L-amino acid transport system permease [Escherichia coli FVEC1302] Length = 367 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 36/96 (37%), Positives = 60/96 (62%) Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315 F+ T + + + + + +A++AE+VR GL A+P+GQ EAA +L L + K LV+ Sbjct: 221 FMAEGTSIDKLIRALVGVILFQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQGLVI 280 Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 LPQA++ +IP L + + L K++SL + +G DL S Sbjct: 281 LPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFS 316 >gi|193071516|ref|ZP_03052426.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Escherichia coli E110019] gi|192955153|gb|EDV85646.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Escherichia coli E110019] Length = 367 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 34/76 (44%), Positives = 53/76 (69%) Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335 + +A++AE+VR GL A+P+GQ EAA +L L + K LV+LPQA++ +IP L + + L Sbjct: 241 FQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQGLVILPQALKLVIPGLVNTIIALF 300 Query: 336 KNSSLAVAVGFADLVS 351 K++SL + +G DL S Sbjct: 301 KDTSLVIIIGLFDLFS 316 >gi|313618407|gb|EFR90430.1| arginine transport system permease protein ArtQ [Listeria innocua FSL S4-378] Length = 229 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 34/102 (33%), Positives = 64/102 (62%) Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327 +++IA AA+ AEI R G +++ GQ E+A LGLT+ + R ++LPQ ++ ++P + Sbjct: 102 AVFIAFILNYAAYFAEIFRGGFLSIENGQYESAKVLGLTYGQTLRKIVLPQVVKRVLPAI 161 Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369 ++ +NL+K+SSL +G DL+ G +++ I ++L+ Sbjct: 162 GNEVINLVKDSSLVYILGIGDLLRAGKIAMSRDVTLIPLVLV 203 >gi|292486752|ref|YP_003529622.1| putative ABC transporter inner membrane protein [Erwinia amylovora CFBP1430] gi|292900846|ref|YP_003540215.1| ABC transporter permease [Erwinia amylovora ATCC 49946] gi|291200694|emb|CBJ47827.1| ABC transporter, permease protein [Erwinia amylovora ATCC 49946] gi|291552169|emb|CBA19206.1| putative ABC transport system, inner membrane component [Erwinia amylovora CFBP1430] Length = 368 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 34/76 (44%), Positives = 53/76 (69%) Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335 + +A++AE+VR GL A+P+GQ EAA +L L + K LV+LPQA++ +IP L + + L Sbjct: 242 FQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQGLVILPQALKLVIPGLVNTIIALF 301 Query: 336 KNSSLAVAVGFADLVS 351 K++SL + +G DL S Sbjct: 302 KDTSLVIIIGLFDLFS 317 >gi|282891083|ref|ZP_06299588.1| hypothetical protein pah_c045o107 [Parachlamydia acanthamoebae str. Hall's coccus] gi|281499076|gb|EFB41390.1| hypothetical protein pah_c045o107 [Parachlamydia acanthamoebae str. Hall's coccus] Length = 147 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 46/136 (33%), Positives = 76/136 (55%), Gaps = 5/136 (3%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G ++SP F++ AL + A+I+EIVR G+ A+P GQ EAA +GL + + ++LPQ Sbjct: 13 GLSLSP-FVAGVTALGINSTAYISEIVRGGINAIPEGQWEAAHVIGLKPWQTLKGIILPQ 71 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL--- 375 +R +P LT++ L+K +S+ + +G A+L V I+ + + I L +YL Sbjct: 72 MLRITLPSLTNELTALIKETSILMVIGVAELTKVSKDIVTRELDPMTIYLTAACLYLVMT 131 Query: 376 -SLSIMIALFMNRLNA 390 S+SI+ R A Sbjct: 132 SSVSILAQFIQKRGQA 147 >gi|218550554|ref|YP_002384345.1| amino-acid ABC transporter membrane protein [Escherichia fergusonii ATCC 35469] gi|218358095|emb|CAQ90741.1| amino-acid transporter subunit ; membrane component of ABC superfamily [Escherichia fergusonii ATCC 35469] Length = 367 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 36/96 (37%), Positives = 60/96 (62%) Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315 F+ T + + + + + +A++AE+VR GL A+P+GQ EAA +L L + K LV+ Sbjct: 221 FMAEGTSIDKLIRALVGVILFQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQGLVI 280 Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 LPQA++ +IP L + + L K++SL + +G DL S Sbjct: 281 LPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFS 316 >gi|260870021|ref|YP_003236423.1| putative transport system permease protein [Escherichia coli O111:H- str. 11128] gi|257766377|dbj|BAI37872.1| putative transport system permease protein [Escherichia coli O111:H- str. 11128] Length = 367 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 36/96 (37%), Positives = 60/96 (62%) Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315 F+ T + + + + + +A++AE+VR GL A+P+GQ EAA +L L + K LV+ Sbjct: 221 FMAEGTSIDKLIRALVGVILFQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQGLVI 280 Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 LPQA++ +IP L + + L K++SL + +G DL S Sbjct: 281 LPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFS 316 >gi|168802618|ref|ZP_02827625.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Escherichia coli O157:H7 str. EC508] gi|189375435|gb|EDU93851.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Escherichia coli O157:H7 str. EC508] gi|320189619|gb|EFW64278.1| Glutamate Aspartate transport system permease protein GltK [Escherichia coli O157:H7 str. EC1212] gi|320639916|gb|EFX09507.1| putative transport system permease protein [Escherichia coli O157:H7 str. G5101] gi|320645632|gb|EFX14641.1| putative transport system permease protein [Escherichia coli O157:H- str. 493-89] gi|320650942|gb|EFX19399.1| putative transport system permease protein [Escherichia coli O157:H- str. H 2687] gi|320662013|gb|EFX29421.1| putative transport system permease protein [Escherichia coli O55:H7 str. USDA 5905] gi|320666849|gb|EFX33828.1| putative transport system permease protein [Escherichia coli O157:H7 str. LSU-61] gi|326337967|gb|EGD61801.1| Glutamate Aspartate transport system permease protein GltK [Escherichia coli O157:H7 str. 1125] Length = 367 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 34/76 (44%), Positives = 53/76 (69%) Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335 + +A++AE+VR GL A+P+GQ EAA +L L + K LV+LPQA++ +IP L + + L Sbjct: 241 FQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQGLVILPQALKLVIPGLVNTIIALF 300 Query: 336 KNSSLAVAVGFADLVS 351 K++SL + +G DL S Sbjct: 301 KDTSLVIIIGLFDLFS 316 >gi|33592599|ref|NP_880243.1| putative inner membrane component of binding-protein-dependent transport system [Bordetella pertussis Tohama I] gi|33601144|ref|NP_888704.1| putative inner membrane component of binding-protein-dependent transport system [Bordetella bronchiseptica RB50] gi|33572245|emb|CAE41797.1| putative inner membrane component of binding-protein-dependent transport system [Bordetella pertussis Tohama I] gi|33575579|emb|CAE32657.1| putative inner membrane component of binding-protein-dependent transport system [Bordetella bronchiseptica RB50] Length = 213 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 38/118 (32%), Positives = 69/118 (58%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P + + L A+ AE+VR ++AVP GQ EAA+AL LT + ++LPQA+ ++ Sbjct: 82 PALLVGIVVLGANAGAYGAEVVRGAILAVPAGQREAAVALNLTRARTIWRIILPQAVPAM 141 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 +PP + + LLKN++L + DL G + ++T + EI + + +Y +++++I Sbjct: 142 LPPTGNLLIELLKNTALVSLITITDLTFRGQLLRSETLRTTEIFTLVLLLYFAVALVI 199 >gi|293412639|ref|ZP_06655362.1| polar amino acid ABC transporter [Escherichia coli B354] gi|331674785|ref|ZP_08375544.1| inner membrane amino-acid ABC transporter permease protein YhdY [Escherichia coli TA280] gi|291469410|gb|EFF11901.1| polar amino acid ABC transporter [Escherichia coli B354] gi|331068224|gb|EGI39620.1| inner membrane amino-acid ABC transporter permease protein YhdY [Escherichia coli TA280] Length = 367 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 36/96 (37%), Positives = 60/96 (62%) Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315 F+ T + + + + + +A++AE+VR GL A+P+GQ EAA +L L + K LV+ Sbjct: 221 FMAEGTSIDKLIRALVGVILFQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQGLVI 280 Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 LPQA++ +IP L + + L K++SL + +G DL S Sbjct: 281 LPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFS 316 >gi|260461491|ref|ZP_05809738.1| polar amino acid ABC transporter, inner membrane subunit [Mesorhizobium opportunistum WSM2075] gi|259032561|gb|EEW33825.1| polar amino acid ABC transporter, inner membrane subunit [Mesorhizobium opportunistum WSM2075] Length = 221 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 56/188 (29%), Positives = 99/188 (52%), Gaps = 31/188 (16%) Query: 195 VLGIVLSLF---ATRLSRHF---HEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248 V+G+VL+++ A R+ R + + + +PL+ + + +GLPT+V L + Sbjct: 37 VIGLVLAVWYVSAGRVVRAVIAAYVEFIRNVPLILLVYLVFYGLPTVV------DLAYSA 90 Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308 P S + LS Y+ A++ E+ RSGL AVPRGQ++A A+GLT Sbjct: 91 PT-----------------SFVLTLSVYSGAYLVEVFRSGLEAVPRGQLDAGKAIGLTPW 133 Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN-QTGQAIEII 367 + V LP +R +P L++ +++L K++S+A + +L + G IN T + +E+ Sbjct: 134 QRLLHVRLPTMLRITLPALSNTFISLFKDTSIASVISVPEL-TYGAQWINFNTFRIVEVY 192 Query: 368 LIWMFIYL 375 L+ +YL Sbjct: 193 LVTTAMYL 200 >gi|224437620|ref|ZP_03658573.1| putative ABC-type amino-acid transporter permease protein [Helicobacter cinaedi CCUG 18818] gi|313144071|ref|ZP_07806264.1| amino acid ABC transporter [Helicobacter cinaedi CCUG 18818] gi|313129102|gb|EFR46719.1| amino acid ABC transporter [Helicobacter cinaedi CCUG 18818] Length = 219 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 58/212 (27%), Positives = 96/212 (45%), Gaps = 33/212 (15%) Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF----LIFGLPTLV 236 LT+ V S +LG L++ +R++ + + L +YI TF L+ + T V Sbjct: 19 LTLMVAVATCVISIILGTFLAI-----TRNYGGRIARTLAAIYIETFRNTPLLLWMLTAV 73 Query: 237 LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296 + + D V G F S YT++ +AEI+R GL ++P+GQ Sbjct: 74 FVLPSFFGRADPAVWGTIGF-----------------SLYTSSVMAEIIRGGLNSIPKGQ 116 Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356 EAA + G + ++LPQ R +IP L SQ + K++S + A+L I Sbjct: 117 FEAAYSQGFSQFFTLFYIILPQTFRKVIPSLLSQIITTFKDTSFLAGLQIAELTYQSKII 176 Query: 357 INQTGQAIEIIL-------IWMFIYLSLSIMI 381 + Q EI+L I+ + SLS+++ Sbjct: 177 LAQLTSFEEILLMIGVVASIYFVVCFSLSVLV 208 >gi|110643516|ref|YP_671246.1| amino acid ABC transporter permease [Escherichia coli 536] gi|191173841|ref|ZP_03035362.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Escherichia coli F11] gi|218702042|ref|YP_002409671.1| amino-acid ABC transporter membrane protein [Escherichia coli IAI39] gi|110345108|gb|ABG71345.1| hypothetical amino-acid ABC transporter permease protein YhdY [Escherichia coli 536] gi|190905891|gb|EDV65509.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Escherichia coli F11] gi|218372028|emb|CAR19886.1| amino-acid transporter subunit ; membrane component of ABC superfamily [Escherichia coli IAI39] gi|323966448|gb|EGB61882.1| inner membrane transport system [Escherichia coli M863] gi|327251364|gb|EGE63053.1| general L-amino acid transport system permease protein aapM [Escherichia coli STEC_7v] Length = 367 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 34/76 (44%), Positives = 53/76 (69%) Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335 + +A++AE+VR GL A+P+GQ EAA +L L + K LV+LPQA++ +IP L + + L Sbjct: 241 FQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQGLVILPQALKLVIPGLVNTIIALF 300 Query: 336 KNSSLAVAVGFADLVS 351 K++SL + +G DL S Sbjct: 301 KDTSLVIIIGLFDLFS 316 >gi|227818837|ref|YP_002822808.1| ABC-type amino acid transport system, permease component [Sinorhizobium fredii NGR234] gi|36959095|gb|AAQ87520.1| Transporter [Sinorhizobium fredii NGR234] gi|227337836|gb|ACP22055.1| putative ABC-type amino acid transport system, permease component [Sinorhizobium fredii NGR234] Length = 216 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 38/95 (40%), Positives = 59/95 (62%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 ++++ IA + + +AF+ EI R + AVP+GQ EAA ALGL + + ++LPQA++ +P Sbjct: 85 WIAVAIAFTLHASAFLGEIWRGSIEAVPKGQTEAANALGLHYVSRMKDIILPQALKISMP 144 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 + L+K +SLA VGF +L G I NQT Sbjct: 145 ATIGFLVQLIKGTSLAAIVGFIELTRAGQIISNQT 179 >gi|323162955|gb|EFZ48790.1| general L-amino acid transport system permease protein aapM [Escherichia coli E128010] Length = 154 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 34/76 (44%), Positives = 53/76 (69%) Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335 + +A++AE+VR GL A+P+GQ EAA +L L + K LV+LPQA++ +IP L + + L Sbjct: 28 FQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQGLVILPQALKLVIPGLVNTIIALF 87 Query: 336 KNSSLAVAVGFADLVS 351 K++SL + +G DL S Sbjct: 88 KDTSLVIIIGLFDLFS 103 >gi|331684911|ref|ZP_08385503.1| inner membrane amino-acid ABC transporter permease protein YhdY [Escherichia coli H299] gi|331078526|gb|EGI49732.1| inner membrane amino-acid ABC transporter permease protein YhdY [Escherichia coli H299] Length = 367 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 36/96 (37%), Positives = 60/96 (62%) Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315 F+ T + + + + + +A++AE+VR GL A+P+GQ EAA +L L + K LV+ Sbjct: 221 FMAEGTSIDKLIRALVGVILFQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQGLVI 280 Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 LPQA++ +IP L + + L K++SL + +G DL S Sbjct: 281 LPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFS 316 >gi|156976755|ref|YP_001447661.1| arginine transporter permease subunit ArtQ [Vibrio harveyi ATCC BAA-1116] gi|156528349|gb|ABU73434.1| hypothetical protein VIBHAR_05530 [Vibrio harveyi ATCC BAA-1116] Length = 229 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 46/134 (34%), Positives = 77/134 (57%), Gaps = 1/134 (0%) Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321 VSP F+S +ALS A++ ++ +R L AV RGQ EAA ALG++ A ++LPQA+R Sbjct: 87 VSP-FLSGVVALSLIFASYASQTLRGALKAVGRGQREAASALGISQAHAFVRIVLPQAIR 145 Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 +P LT+Q+L LLK+++L +G DL+ T +A IYL ++++ Sbjct: 146 HALPGLTNQWLVLLKDTALVSLIGVTDLLKQAQLTSAATHEAFTWYATAAAIYLGITLIT 205 Query: 382 ALFMNRLNAKIALK 395 + ++ K +++ Sbjct: 206 QRAVKLIDKKFSIQ 219 >gi|71733225|ref|YP_274660.1| glutamine ABC transporter permease [Pseudomonas syringae pv. phaseolicola 1448A] gi|71553778|gb|AAZ32989.1| glutamine ABC transporter, permease protein [Pseudomonas syringae pv. phaseolicola 1448A] Length = 246 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 42/133 (31%), Positives = 74/133 (55%), Gaps = 10/133 (7%) Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286 +++ G+P L++I Y F P+L N G F ++ L Y +A++ EI+R Sbjct: 69 YVMRGIPLLMVIFWTY---FLVPLLIGHNITG-------FTTMLCTLVVYQSAYLCEIIR 118 Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346 + A+P GQ EA+ ALG+ + + T V+LPQA+ + +P L SQ+++++K +SL + Sbjct: 119 GAIQALPAGQYEASRALGMGYMRTTVWVILPQALYNALPSLISQFISIIKETSLGYVINV 178 Query: 347 ADLVSVGGTIINQ 359 ++ I NQ Sbjct: 179 QEVTFAANQINNQ 191 >gi|15612734|ref|NP_241037.1| amino acid ABC transporter (permease) [Bacillus halodurans C-125] gi|10172783|dbj|BAB03890.1| amino acid ABC transporter (permease) [Bacillus halodurans C-125] Length = 233 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 48/157 (30%), Positives = 94/157 (59%), Gaps = 14/157 (8%) Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252 SF +G+ +++ T L+R K + +Y+S +I G P LV + + + + P +G Sbjct: 42 SFTIGLFIAVL-TALARISGVAPLKMVARVYVS--IIRGTPLLVQL---FIIFYGLPSIG 95 Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312 T+ P F + I S A+ +EI+R+ ++++P+GQ EAA ++G+++ +A + Sbjct: 96 -------VTIDP-FPAAVIGFSLNVGAYASEIIRAAILSIPKGQWEAAYSIGMSYPQALK 147 Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349 ++LPQA R IPPL++ +++L+K++SLA + A++ Sbjct: 148 RIVLPQASRVSIPPLSNSFISLVKDTSLASLILVAEM 184 >gi|299535149|ref|ZP_07048474.1| amino acid ABC transporter, permease protein [Lysinibacillus fusiformis ZC1] gi|298729466|gb|EFI70016.1| amino acid ABC transporter, permease protein [Lysinibacillus fusiformis ZC1] Length = 218 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 53/179 (29%), Positives = 89/179 (49%), Gaps = 20/179 (11%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 + PLL + FGLP L PV+G++ V F++ + Sbjct: 60 RGTPLLLQLLLICFGLPML-------------PVIGEY------LVLDRFVAACLGFILN 100 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 AA+ AEI R GL+A+ +GQ EAA LGL+ + T V+LPQ R +P L+++ + L+K Sbjct: 101 YAAYFAEIFRGGLLAIDKGQYEAAQVLGLSKWQTTTRVILPQMFRVALPALSNESVTLIK 160 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395 +++L AV +L+ T +N+ I I IYL +++++ +F L + + Sbjct: 161 DTALLYAVAVPELLHFAQTAVNRDF-TITPFFIAGAIYLVMTLVLTVFFKWLEKRFKFE 218 >gi|284923284|emb|CBG36378.1| ABC transporter, permease protein [Escherichia coli 042] Length = 368 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 34/76 (44%), Positives = 53/76 (69%) Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335 + +A++AE+VR GL A+P+GQ EAA +L L + K LV+LPQA++ +IP L + + L Sbjct: 242 FQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQGLVILPQALKLVIPGLVNTIIALF 301 Query: 336 KNSSLAVAVGFADLVS 351 K++SL + +G DL S Sbjct: 302 KDTSLVIIIGLFDLFS 317 >gi|281602646|gb|ADA75630.1| putative transport system permease protein [Shigella flexneri 2002017] Length = 368 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 34/76 (44%), Positives = 53/76 (69%) Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335 + +A++AE+VR GL A+P+GQ EAA +L L + K LV+LPQA++ +IP L + + L Sbjct: 242 FQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQGLVILPQALKLVIPGLVNTIIALF 301 Query: 336 KNSSLAVAVGFADLVS 351 K++SL + +G DL S Sbjct: 302 KDTSLVIIIGLFDLFS 317 >gi|237752093|ref|ZP_04582573.1| polar amino acid ABC transporter [Helicobacter winghamensis ATCC BAA-430] gi|229376660|gb|EEO26751.1| polar amino acid ABC transporter [Helicobacter winghamensis ATCC BAA-430] Length = 232 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 40/125 (32%), Positives = 74/125 (59%), Gaps = 6/125 (4%) Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 + A+++EI+R G+++V GQ EAA ALGL +++ R V+ PQA+++ +P L ++++ LLK Sbjct: 111 SGAYVSEIIRGGILSVDSGQNEAARALGLNSKQSMRFVVFPQALKNALPNLGNEFITLLK 170 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI---YLSLSIMIALFMNRLNAKIA 393 +S+A V DL TI + E ++ + F+ YL L I+ + + + K+ Sbjct: 171 ETSVANYVTVHDLTYAFKTI---GSASYEYMIPYFFLAVCYLVLVILASFIVKKYEGKLR 227 Query: 394 LKEKK 398 +K+ Sbjct: 228 RSDKR 232 >gi|227887998|ref|ZP_04005803.1| amino-acid ABC superfamily ATP binding cassette transporter permease protein YhdY [Escherichia coli 83972] gi|300991069|ref|ZP_07179490.1| ABC transporter, permease protein [Escherichia coli MS 45-1] gi|301047873|ref|ZP_07194920.1| ABC transporter, permease protein [Escherichia coli MS 185-1] gi|227835394|gb|EEJ45860.1| amino-acid ABC superfamily ATP binding cassette transporter permease protein YhdY [Escherichia coli 83972] gi|300300216|gb|EFJ56601.1| ABC transporter, permease protein [Escherichia coli MS 185-1] gi|300406990|gb|EFJ90528.1| ABC transporter, permease protein [Escherichia coli MS 45-1] gi|315294823|gb|EFU54166.1| ABC transporter, permease protein [Escherichia coli MS 153-1] Length = 347 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 60/220 (27%), Positives = 106/220 (48%), Gaps = 28/220 (12%) Query: 132 YVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV 191 Y+ V+ I PL+V + +Y L + + R TLT+ + Sbjct: 105 YIAVWAVIYPLIVWWLMYGGFLGLERV-------------ETRQWGGLTLTLIIASVGIA 151 Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251 + GI+L+L R H + L +++I + G+P LI + + P+ Sbjct: 152 GALPWGILLAL-----GRRSHMPIVRILSVIFIEFWR--GVP---LITVLFMSSVMLPL- 200 Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311 F+ T + + + + + +A++AE+VR GL A+P+GQ EAA +L L + K Sbjct: 201 ----FMAEDTSIDKLIRALVGVILFQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQ 256 Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 LV++PQA++ +IP L + + L K++SL + +G DL S Sbjct: 257 GLVIMPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFS 296 >gi|254254090|ref|ZP_04947407.1| ABC-type polar amino acid transport system ATPase component [Burkholderia dolosa AUO158] gi|124898735|gb|EAY70578.1| ABC-type polar amino acid transport system ATPase component [Burkholderia dolosa AUO158] Length = 590 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 44/137 (32%), Positives = 79/137 (57%), Gaps = 4/137 (2%) Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321 +SP F++ + L+ AAF AE++R G+++V +GQ+EAA ALGL + T ++LPQAMR Sbjct: 164 ISP-FLAAVLGLTLNHAAFSAEVIRGGILSVDQGQLEAAAALGLPRSRQTTRIVLPQAMR 222 Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI---WMFIYLSLS 378 +I+P + + L K +S+ + +L I + + I ++++ W I L++ Sbjct: 223 AILPTAFNDLITLAKGTSMVYVLAMPELFYTVQVIYRRNLEVIPLLMVATAWYLIILTVL 282 Query: 379 IMIALFMNRLNAKIALK 395 I + + R A+ AL+ Sbjct: 283 SAIQVQVERHYARGALR 299 >gi|227325812|ref|ZP_03829836.1| Polar amino acid ABC transporter, inner membrane subunit precursor [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 369 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 31/95 (32%), Positives = 60/95 (63%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 + + + I ++ + A + AE++R GL +VPRGQ EAA+AL L + T ++LPQA+R + Sbjct: 228 KLLRIIIGIALFFACYQAEVIRGGLQSVPRGQYEAAMALNLGYWHTTTKIILPQALRICL 287 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359 P +T+ + +KN+S + +G D+++ +++ Sbjct: 288 PAMTNHIIAAMKNTSFVIIIGLFDILTATSSVMQD 322 >gi|298346439|ref|YP_003719126.1| polar amino acid ABC transporter membrane subunit [Mobiluncus curtisii ATCC 43063] gi|298236500|gb|ADI67632.1| polar amino acid ABC superfamily ATP binding cassette transporter, membrane subunit [Mobiluncus curtisii ATCC 43063] Length = 303 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 41/136 (30%), Positives = 77/136 (56%), Gaps = 20/136 (14%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 + P++ + F+ +GLP AL++Q + +S+++ +S Sbjct: 80 RGTPMILQAVFIYYGLPYFTNNALQFQSMWG-------------------VSIFV-VSIN 119 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 T A+IAE VR G+I+V GQ E A A+G+TH + V+LPQA+R+++P + + ++ +K Sbjct: 120 TGAYIAESVRGGIISVDPGQTEGARAIGMTHFQTMLYVILPQALRNLLPQIGNNFIINIK 179 Query: 337 NSSLAVAVGFADLVSV 352 ++S+ +GF++ SV Sbjct: 180 DTSVMFIIGFSEFFSV 195 >gi|606211|gb|AAA58074.1| ORF_o368b [Escherichia coli str. K-12 substr. MG1655] gi|315617080|gb|EFU97690.1| general L-amino acid transport system permease protein aapM [Escherichia coli 3431] Length = 368 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 34/76 (44%), Positives = 53/76 (69%) Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335 + +A++AE+VR GL A+P+GQ EAA +L L + K LV+LPQA++ +IP L + + L Sbjct: 242 FQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQGLVILPQALKLVIPGLVNTIIALF 301 Query: 336 KNSSLAVAVGFADLVS 351 K++SL + +G DL S Sbjct: 302 KDTSLVIIIGLFDLFS 317 >gi|320656323|gb|EFX24235.1| putative transport system permease protein [Escherichia coli O55:H7 str. 3256-97 TW 07815] Length = 367 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 34/76 (44%), Positives = 53/76 (69%) Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335 + +A++AE+VR GL A+P+GQ EAA +L L + K LV+LPQA++ +IP L + + L Sbjct: 241 FQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQGLVILPQALKLVIPGLVNTIIALF 300 Query: 336 KNSSLAVAVGFADLVS 351 K++SL + +G DL S Sbjct: 301 KDTSLVIIIGLFDLFS 316 >gi|169627382|ref|YP_001701031.1| amino acid ABC transporter permease [Mycobacterium abscessus ATCC 19977] gi|169239349|emb|CAM60377.1| Probable amino acid ABC transporter, permease [Mycobacterium abscessus] Length = 481 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 54/158 (34%), Positives = 92/158 (58%), Gaps = 14/158 (8%) Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252 SFV+G+V++L L+R + L +YIS +I G P L+ + L + L Sbjct: 290 SFVIGLVIAL-GVALARMSGHRVVTGLARIYIS--VIRGTPLLLQLFLIFFA------LP 340 Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312 +F G +SP F + IA S + AEI+RS ++++PRGQ EAA +LG+++ Sbjct: 341 EF----GVKISP-FPAAVIAFSLNVGGYAAEIIRSSILSIPRGQWEAASSLGMSYSTTLW 395 Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 +++PQA R +PPL++ ++L+K++SLA A+ D++ Sbjct: 396 RIVIPQASRVAVPPLSNTLISLVKDTSLASAILVTDVM 433 >gi|254229407|ref|ZP_04922823.1| ABC-type arginine transport system, permease component [Vibrio sp. Ex25] gi|262396867|ref|YP_003288720.1| arginine ABC transporter permease protein ArtQ [Vibrio sp. Ex25] gi|269964163|ref|ZP_06178460.1| arginine ABC transporter, permease protein [Vibrio harveyi 1DA3] gi|269968081|ref|ZP_06182118.1| arginine ABC transporter, permease protein [Vibrio alginolyticus 40B] gi|151938098|gb|EDN56940.1| ABC-type arginine transport system, permease component [Vibrio sp. Ex25] gi|262340461|gb|ACY54255.1| arginine ABC transporter permease protein ArtQ [Vibrio sp. Ex25] gi|269827327|gb|EEZ81624.1| arginine ABC transporter, permease protein [Vibrio alginolyticus 40B] gi|269831118|gb|EEZ85280.1| arginine ABC transporter, permease protein [Vibrio harveyi 1DA3] Length = 229 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 46/134 (34%), Positives = 77/134 (57%), Gaps = 1/134 (0%) Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321 VSP F+S +ALS A++ ++ +R L AV RGQ EAA ALG++ A ++LPQA+R Sbjct: 87 VSP-FLSGVVALSLIFASYASQTLRGALKAVGRGQREAASALGISQAHAFVRIVLPQAVR 145 Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 +P LT+Q+L LLK+++L +G DL+ T +A IYL ++++ Sbjct: 146 HALPGLTNQWLVLLKDTALVSLIGVTDLLKQAQLTSAATHEAFTWYATAAAIYLGITLIT 205 Query: 382 ALFMNRLNAKIALK 395 + ++ K +++ Sbjct: 206 QRAVKLIDKKFSIQ 219 >gi|331664879|ref|ZP_08365784.1| inner membrane amino-acid ABC transporter permease protein YhdY [Escherichia coli TA143] gi|331058127|gb|EGI30109.1| inner membrane amino-acid ABC transporter permease protein YhdY [Escherichia coli TA143] Length = 367 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 34/76 (44%), Positives = 53/76 (69%) Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335 + +A++AE+VR GL A+P+GQ EAA +L L + K LV+LPQA++ +IP L + + L Sbjct: 241 FQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQGLVILPQALKLVIPGLVNTIIALF 300 Query: 336 KNSSLAVAVGFADLVS 351 K++SL + +G DL S Sbjct: 301 KDTSLVIIIGLFDLFS 316 >gi|224476916|ref|YP_002634522.1| hypothetical protein Sca_1432 [Staphylococcus carnosus subsp. carnosus TM300] gi|222421523|emb|CAL28337.1| conserved hypothetical protein [Staphylococcus carnosus subsp. carnosus TM300] Length = 491 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 31/80 (38%), Positives = 59/80 (73%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IA+ AA+IAEI+R+G+ AV +GQ EAA +LGL + + + ++LPQA+++I+P L ++ Sbjct: 366 IAMVINCAAYIAEIIRAGINAVDKGQTEAARSLGLGYGQTMKTIILPQAIKNILPALGNE 425 Query: 331 YLNLLKNSSLAVAVGFADLV 350 ++ ++K SS+ +G ++++ Sbjct: 426 FVTVIKESSIVSVIGVSEIM 445 Score = 40.4 bits (93), Expect = 0.47, Method: Compositional matrix adjust. Identities = 18/67 (26%), Positives = 37/67 (55%) Query: 83 SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142 + Y++ + G NT ++ G++ + G ++ +LS+ K + W+ VY+E R P L Sbjct: 281 TKYSSFFITGIKNTILISIIGVVLGAVFGAILALMKLSSFKPLKWLATVYIEFIRGTPLL 340 Query: 143 VVIFFLY 149 V +F ++ Sbjct: 341 VQVFLVF 347 >gi|27468910|ref|NP_765547.1| ABC transporter (permease protein) [Staphylococcus epidermidis ATCC 12228] gi|27316458|gb|AAO05633.1|AE016750_238 ABC transporter (permease protein) [Staphylococcus epidermidis ATCC 12228] Length = 164 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 36/122 (29%), Positives = 74/122 (60%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I LS A+ +EI+R G++++P+GQ EAA ++G+ +R+ + ++LPQA+R IP L + Sbjct: 37 IGLSLNVGAYASEIIRGGILSIPKGQTEAAYSIGMNYRQTVQRIILPQAIRVSIPALGNT 96 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 +L+L+K++SL + A++ + + T + + I L+ +Y + +I++ + Sbjct: 97 FLSLIKDTSLLGFILVAEMFRKAQEVASTTYEYLTIYLLVALMYWVVCFVISIIQGWYES 156 Query: 391 KI 392 +I Sbjct: 157 RI 158 >gi|300697545|ref|YP_003748206.1| amino acid ABC transporter transmembrane protein [Ralstonia solanacearum CFBP2957] gi|299074269|emb|CBJ53814.1| amino acid ABC transporter transmembrane protein [Ralstonia solanacearum CFBP2957] Length = 250 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 58/206 (28%), Positives = 101/206 (49%), Gaps = 18/206 (8%) Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251 +F L ++L+L R H L+Y+ + G+P L+ I Y F P+L Sbjct: 43 LAFPLSVLLALARLSPWRPLHASVTA---LVYV----VRGVPLLMWILWVY---FLVPLL 92 Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311 N G F ++ L Y +++E+VR+G+ A+P+GQMEAA ALG ++ A Sbjct: 93 IGNNVSG-------FTTMVCTLVIYEGVYLSEVVRAGIEALPKGQMEAARALGHSYFGAM 145 Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ-TGQAIEIILIW 370 RLV+LPQA+ +++P + +Q+++ +K ++L + +L I N + +I + Sbjct: 146 RLVILPQALYNMLPSMLAQFVSTIKETTLGYVINVPELTFAANQINNALLSKPFQIFFML 205 Query: 371 MFIYLSLSIMIALFMNRLNAKIALKE 396 IY + + L +IA K Sbjct: 206 AVIYFVVCWSLTRTARALEHRIAAKR 231 >gi|289646273|ref|ZP_06477616.1| glutamine ABC transporter, permease protein [Pseudomonas syringae pv. aesculi str. 2250] Length = 246 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 42/133 (31%), Positives = 74/133 (55%), Gaps = 10/133 (7%) Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286 +++ G+P L++I Y F P+L N G F ++ L Y +A++ EI+R Sbjct: 69 YVMRGIPLLMVIFWTY---FLVPLLIGHNITG-------FTTMLCTLVVYQSAYLCEIIR 118 Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346 + A+P GQ EA+ ALG+ + + T V+LPQA+ + +P L SQ+++++K +SL + Sbjct: 119 GAIQALPAGQYEASRALGMGYMRTTVWVILPQALYNALPSLISQFISIIKETSLGYVINV 178 Query: 347 ADLVSVGGTIINQ 359 ++ I NQ Sbjct: 179 QEVTFAANQINNQ 191 >gi|282857607|ref|ZP_06266826.1| L-cystine transport system permease protein TcyL [Pyramidobacter piscolens W5455] gi|282584557|gb|EFB89906.1| L-cystine transport system permease protein TcyL [Pyramidobacter piscolens W5455] Length = 221 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 35/127 (27%), Positives = 72/127 (56%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + ++L C T+AF+AE R+ L +V +GQ+EA ++G+T +A R +LPQA P Sbjct: 91 FQATVVSLICNTSAFMAESFRAALESVDKGQIEACYSMGMTRAQAMRRAILPQAFVVAAP 150 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 + + ++ ++K ++L VG AD++ + + E L +Y+++ +++ F+ Sbjct: 151 SIGNHFIGIIKGTALGFTVGLADVMGTAKMEAALSLRFFEAYLCVTIVYVAIVLIVEFFL 210 Query: 386 NRLNAKI 392 R+ ++ Sbjct: 211 RRIERRL 217 >gi|253575106|ref|ZP_04852445.1| polar amino acid ABC transporter [Paenibacillus sp. oral taxon 786 str. D14] gi|251845562|gb|EES73571.1| polar amino acid ABC transporter [Paenibacillus sp. oral taxon 786 str. D14] Length = 261 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 40/124 (32%), Positives = 69/124 (55%) Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333 +T AF++E++R+ + AV RGQ+EAA A+G+ +A ++LPQA+ +P ++ + Sbjct: 105 GLHTGAFMSEMIRASVTAVDRGQVEAAYAIGMKGHQAFTRIVLPQALAVAVPVFSNMVIA 164 Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393 LLK++SLA +G +L T+ T IE L FIYL +S + + ++ Sbjct: 165 LLKDTSLAFTLGVMELTGKAQTLGALTQHFIEAYLALAFIYLVVSFTLEKLLRAAERRLL 224 Query: 394 LKEK 397 E+ Sbjct: 225 KHEQ 228 >gi|215488577|ref|YP_002331008.1| predicted amino-acid transporter subunit [Escherichia coli O127:H6 str. E2348/69] gi|215266649|emb|CAS11088.1| predicted amino-acid transporter subunit [Escherichia coli O127:H6 str. E2348/69] gi|320194756|gb|EFW69386.1| Glutamate Aspartate transport system permease protein GltK [Escherichia coli WV_060327] Length = 367 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 36/96 (37%), Positives = 60/96 (62%) Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315 F+ T + + + + + +A++AE+VR GL A+P+GQ EAA +L L + K LV+ Sbjct: 221 FMAEGTSIDKLIRALVGVILFQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQGLVI 280 Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 LPQA++ +IP L + + L K++SL + +G DL S Sbjct: 281 LPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFS 316 >gi|77461682|ref|YP_351189.1| amino acid ABC transporter permease [Pseudomonas fluorescens Pf0-1] gi|77385685|gb|ABA77198.1| amino acid ABC transporter membrane protein 2, PAAT family [Pseudomonas fluorescens Pf0-1] Length = 216 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 37/104 (35%), Positives = 63/104 (60%), Gaps = 1/104 (0%) Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316 + G +SP +M+ IAL+ +T+A++AEI R + A+P GQ EA+ +L L + R V+L Sbjct: 78 LAGVEISP-WMAAAIALTLFTSAYLAEIWRGCVEAIPHGQWEASSSLALNPLEQLRYVIL 136 Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 PQA+R + P + ++K +++ +GF +L GG + N T Sbjct: 137 PQALRIAVAPTVGFSVQVVKGTAVTSIIGFTELTKTGGMLANAT 180 >gi|330684749|gb|EGG96444.1| ABC transporter, permease protein [Staphylococcus epidermidis VCU121] Length = 486 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 30/80 (37%), Positives = 59/80 (73%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IAL ++A+IAEI R+G+ ++ +GQ EAA +LGL++ + + V++PQA+++I+P L ++ Sbjct: 361 IALVINSSAYIAEIFRAGINSIDKGQTEAARSLGLSYNQTMKSVIMPQAIKNILPALGNE 420 Query: 331 YLNLLKNSSLAVAVGFADLV 350 ++ L+K SS+ +G +++ Sbjct: 421 FVTLIKESSIVSTIGVGEIM 440 Score = 45.8 bits (107), Expect = 0.012, Method: Compositional matrix adjust. Identities = 32/110 (29%), Positives = 53/110 (48%), Gaps = 6/110 (5%) Query: 40 IFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWL 99 I L +N N + NL ++S+ A D G YT Y + + G NT + Sbjct: 239 ILLKKLNQTINEVNDKNLI--DKYMSKAANDMQDDGNF-YTK---YKSFFIKGLENTILI 292 Query: 100 AFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 +F G++ I+G + +LS K ++WI +Y+E R P LV +F ++ Sbjct: 293 SFIGVVLGAILGAFIALMKLSKFKPLSWIASIYIEFLRGTPLLVQVFIVF 342 >gi|313617523|gb|EFR89868.1| L-cystine transport system permease protein TcyM [Listeria innocua FSL S4-378] Length = 236 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 45/123 (36%), Positives = 67/123 (54%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IALS A++ EI+RSG+IAV GQMEAA ++G TH +A R VLLPQA + +P T+ Sbjct: 107 IALSFTAGAYLTEILRSGIIAVDIGQMEAAYSMGYTHGQAIRKVLLPQAFMTSLPNFTNL 166 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 + L +S+A V ++ + + + +E + IY L+I+I L Sbjct: 167 CIGFLHTTSIAAIVAVPEITGMATIVASDNYAFLEAFIGAALIYWFLTILIEAINYILEK 226 Query: 391 KIA 393 IA Sbjct: 227 NIA 229 >gi|296271867|ref|YP_003654498.1| polar amino acid ABC transporter inner membrane subunit [Arcobacter nitrofigilis DSM 7299] gi|296096042|gb|ADG91992.1| polar amino acid ABC transporter, inner membrane subunit [Arcobacter nitrofigilis DSM 7299] Length = 216 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 41/130 (31%), Positives = 70/130 (53%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P + I LS TAAF AEI+R G +P GQ E A + G T + + LPQ +R + Sbjct: 85 PSIAAAIITLSMNTAAFQAEILRGGFQTIPHGQKETAWSYGYTPFQCLYYIELPQVIRKV 144 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 +P LT++ ++++KNS+L + DL+ V + T + IE + +YL L+ I++ Sbjct: 145 LPSLTNEIIDIIKNSALISTIAVIDLMRVTQVYSSTTYRPIEFFVSAGLLYLLLTSCISI 204 Query: 384 FMNRLNAKIA 393 + +++ Sbjct: 205 LGRYIESRLT 214 Score = 36.2 bits (82), Expect = 8.5, Method: Compositional matrix adjust. Identities = 18/55 (32%), Positives = 29/55 (52%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143 +L G T W++ ++ I ++ GRLS+N + +ICR Y+ R P LV Sbjct: 14 LLNGLWMTTWISLLSILIGFIFSIILCLGRLSSNTFINFICRFYISAIRGTPLLV 68 >gi|239631652|ref|ZP_04674683.1| ABC-type amino acid transport system protein [Lactobacillus paracasei subsp. paracasei 8700:2] gi|239526117|gb|EEQ65118.1| ABC-type amino acid transport system protein [Lactobacillus paracasei subsp. paracasei 8700:2] Length = 218 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 54/189 (28%), Positives = 87/189 (46%), Gaps = 35/189 (18%) Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKAL-----------PLLYI 224 LS +T+ A + S LG++LS+ + K GK L PLL Sbjct: 12 LSGVKMTLGIFAITLIGSIPLGLILSVGLIPKPKSILGKAGKGLLEGYVWVFRGTPLLLQ 71 Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284 F+ +GLP + L+ FD+ F + +A A + AEI Sbjct: 72 LMFIFYGLPIIGLV-------FDR-----------------FSAALVAFILNYATYFAEI 107 Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344 R G A+ GQ EA+ L +T +A R V++PQ ++ ++P + ++ +NL+K+SSL + Sbjct: 108 FRGGFGAIDEGQFEASTVLNMTRWQALRYVVIPQVVKIVLPSIGNEVINLVKDSSLVYVI 167 Query: 345 GFADLVSVG 353 G DL+ G Sbjct: 168 GLGDLLRAG 176 >gi|254454563|ref|ZP_05068000.1| polar amino acid ABC transport permease protein AapM-1 [Octadecabacter antarcticus 238] gi|198268969|gb|EDY93239.1| polar amino acid ABC transport permease protein AapM-1 [Octadecabacter antarcticus 238] Length = 775 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 42/115 (36%), Positives = 68/115 (59%), Gaps = 9/115 (7%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I ++ + AA+IAE++R GL A+ GQ E A +LGL++ ++ RL++LPQAM+ IP + + Sbjct: 646 IMVTLFAAAYIAEVIRGGLAALATGQYEGADSLGLSYWQSMRLIVLPQAMKISIPGIVNT 705 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI-ALF 384 ++ L K+++L V +G +D + I T W IY L + I ALF Sbjct: 706 FIGLFKDTTLVVFIGLSDPIGFSNLIRADTD--------WNGIYWELFVFIGALF 752 >gi|170018487|ref|YP_001723441.1| polar amino acid ABC transporter, inner membrane subunit [Escherichia coli ATCC 8739] gi|194440026|ref|ZP_03072083.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Escherichia coli 101-1] gi|253771899|ref|YP_003034730.1| polar amino acid ABC transporter inner membrane subunit [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254163205|ref|YP_003046313.1| putative amino-acid transporter subunit [Escherichia coli B str. REL606] gi|169753415|gb|ACA76114.1| polar amino acid ABC transporter, inner membrane subunit [Escherichia coli ATCC 8739] gi|194421030|gb|EDX37060.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Escherichia coli 101-1] gi|242378804|emb|CAQ33596.1| yhdY, subunit of YhdW/YhdX/YhdY/YhdZ ABC transporter [Escherichia coli BL21(DE3)] gi|253322943|gb|ACT27545.1| polar amino acid ABC transporter, inner membrane subunit [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253975106|gb|ACT40777.1| predicted amino-acid transporter subunit [Escherichia coli B str. REL606] gi|253979262|gb|ACT44932.1| predicted amino-acid transporter subunit [Escherichia coli BL21(DE3)] gi|323941637|gb|EGB37816.1| inner membrane transport system [Escherichia coli E482] gi|323970315|gb|EGB65585.1| inner membrane transport system [Escherichia coli TA007] Length = 367 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 36/96 (37%), Positives = 60/96 (62%) Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315 F+ T + + + + + +A++AE+VR GL A+P+GQ EAA +L L + K LV+ Sbjct: 221 FMAEGTSIDKLIRALVGVILFQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQGLVI 280 Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 LPQA++ +IP L + + L K++SL + +G DL S Sbjct: 281 LPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFS 316 >gi|326792531|ref|YP_004310352.1| polar amino acid ABC transporter inner membrane protein [Clostridium lentocellum DSM 5427] gi|326543295|gb|ADZ85154.1| polar amino acid ABC transporter, inner membrane subunit [Clostridium lentocellum DSM 5427] Length = 229 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 43/128 (33%), Positives = 74/128 (57%), Gaps = 4/128 (3%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F S I L+ ++ A+I+EI R + ++ +GQ EAA ALG+T +A R ++LPQA + IP Sbjct: 98 FSSAIIGLAFHSGAYISEIFRGAIESIDKGQNEAAKALGMTKLQAMRRIILPQAFKRSIP 157 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI----WMFIYLSLSIMI 381 L +Q++ +K+SSLA A+ +++ + + A I + ++ I LSL+ ++ Sbjct: 158 ALGNQFIIAIKDSSLASAITITEIIMLTRQYASIKFDAFPIFFVAALYYLIITLSLTKLL 217 Query: 382 ALFMNRLN 389 A RL Sbjct: 218 AYIEKRLK 225 >gi|296117709|ref|ZP_06836293.1| glutamate permease [Corynebacterium ammoniagenes DSM 20306] gi|295969440|gb|EFG82681.1| glutamate permease [Corynebacterium ammoniagenes DSM 20306] Length = 228 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 42/122 (34%), Positives = 75/122 (61%), Gaps = 1/122 (0%) Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335 YT+AF+AE +RSG+ V GQ EAA ++GL+ R ++ PQA+R+ I PL + + L Sbjct: 107 YTSAFVAESLRSGINTVDFGQAEAARSIGLSFSDMFRKIVFPQAVRAAIVPLGNTLIALT 166 Query: 336 KNSSLAVAVGFADL-VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394 KN+++A +G A+ + + TI N Q I ++ ++ L++ + L + +L+ K+A+ Sbjct: 167 KNTTIASTIGVAEASLLMKSTIENHANQLFIIFFVFALGFIILTLPMGLGLGKLSEKMAV 226 Query: 395 KE 396 K+ Sbjct: 227 KK 228 >gi|328948377|ref|YP_004365714.1| polar amino acid ABC transporter, inner membrane subunit [Treponema succinifaciens DSM 2489] gi|328448701|gb|AEB14417.1| polar amino acid ABC transporter, inner membrane subunit [Treponema succinifaciens DSM 2489] Length = 222 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 38/122 (31%), Positives = 68/122 (55%) Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 + A+ EI R+G+ V GQMEA +LGL + + +++ PQA ++++P TS+++ L+K Sbjct: 101 SGAYCTEIFRAGIQGVDSGQMEAGRSLGLNYWQTLTMIIFPQAAKAVLPTYTSEFIVLIK 160 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 +S+A + DL G I N T A +L IYL L++ + + L ++A + Sbjct: 161 ETSVASFIAVMDLTKAGDMIRNATYNAWIPLLSCALIYLCLTLGLTKLFSILEKRMAKSD 220 Query: 397 KK 398 + Sbjct: 221 RD 222 >gi|326388277|ref|ZP_08209880.1| polar amino acid ABC transporter, inner membrane subunit [Novosphingobium nitrogenifigens DSM 19370] gi|326207443|gb|EGD58257.1| polar amino acid ABC transporter, inner membrane subunit [Novosphingobium nitrogenifigens DSM 19370] Length = 242 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 34/108 (31%), Positives = 67/108 (62%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +A++C +A+IAE++R L A+P GQ+EAA+A G+ RL++LPQ +R +P ++ Sbjct: 107 LAMTCCCSAYIAEVLRGALAAIPAGQIEAALACGMGRVTRLRLIVLPQMLRLALPAYGNE 166 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378 + ++K++SLA + D+ V +I + + +++ + +YL L+ Sbjct: 167 LVMMVKSTSLASTITVLDVTGVAQQVIAHSYRTLDVFCLAAGVYLGLT 214 >gi|195977745|ref|YP_002122989.1| ABC transporter membrane-spanning permease - glutamine transport [Streptococcus equi subsp. zooepidemicus MGCS10565] gi|195974450|gb|ACG61976.1| ABC transporter membrane-spanning permease - glutamine transport [Streptococcus equi subsp. zooepidemicus MGCS10565] Length = 159 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 51/135 (37%), Positives = 76/135 (56%), Gaps = 12/135 (8%) Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ-LHFDKPVLGQFN 255 G ++ L T + R H K L LY+ F G P +V I + + LHF+ Sbjct: 31 GTIIGLLVTLIKRS-HIKPLSWLVSLYVWIFR--GTPMVVQIMIAFAWLHFN-----HLP 82 Query: 256 FIGGSTVSPEFMSLY---IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312 IG + +F L I +S + A+I+EIVR+G+ AVP+GQ+EAA +LG+ + A R Sbjct: 83 IIGFGVLDLDFSRLLPGIIIISLNSGAYISEIVRAGIEAVPKGQLEAAYSLGIRPKHAMR 142 Query: 313 LVLLPQAMRSIIPPL 327 V+LPQA+R+I+P L Sbjct: 143 YVILPQALRTILPAL 157 >gi|89110030|ref|AP_003810.1| predicted amino-acid transporter subunit [Escherichia coli str. K-12 substr. W3110] gi|90111567|ref|NP_417736.2| predicted amino-acid transporter subunit [Escherichia coli str. K-12 substr. MG1655] gi|170082798|ref|YP_001732118.1| amino-acid ABC transporter membrane protein [Escherichia coli str. K-12 substr. DH10B] gi|188494363|ref|ZP_03001633.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Escherichia coli 53638] gi|238902368|ref|YP_002928164.1| putative amino-acid transporter subunit [Escherichia coli BW2952] gi|254038436|ref|ZP_04872494.1| inner membrane amino-acid ABC transporter permease yhdY [Escherichia sp. 1_1_43] gi|256024156|ref|ZP_05438021.1| putative amino-acid transporter subunit [Escherichia sp. 4_1_40B] gi|307139958|ref|ZP_07499314.1| putative amino-acid transporter subunit [Escherichia coli H736] gi|331643970|ref|ZP_08345101.1| inner membrane amino-acid ABC transporter permease protein YhdY [Escherichia coli H736] gi|3916018|sp|P45768|YHDY_ECOLI RecName: Full=Inner membrane amino-acid ABC transporter permease protein yhdY gi|85676061|dbj|BAE77311.1| predicted amino-acid transporter subunit [Escherichia coli str. K12 substr. W3110] gi|87082239|gb|AAC76302.2| predicted amino-acid transporter subunit [Escherichia coli str. K-12 substr. MG1655] gi|169890633|gb|ACB04340.1| predicted amino-acid transporter subunit; membrane component of ABC superfamily [Escherichia coli str. K-12 substr. DH10B] gi|188489562|gb|EDU64665.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Escherichia coli 53638] gi|226840060|gb|EEH72081.1| inner membrane amino-acid ABC transporter permease yhdY [Escherichia sp. 1_1_43] gi|238862153|gb|ACR64151.1| predicted amino-acid transporter subunit [Escherichia coli BW2952] gi|260447704|gb|ACX38126.1| polar amino acid ABC transporter, inner membrane subunit [Escherichia coli DH1] gi|309703689|emb|CBJ03030.1| ABC transporter, permease protein [Escherichia coli ETEC H10407] gi|315137853|dbj|BAJ45012.1| putative amino-acid transporter subunit [Escherichia coli DH1] gi|323936246|gb|EGB32538.1| inner membrane transport system [Escherichia coli E1520] gi|331037441|gb|EGI09665.1| inner membrane amino-acid ABC transporter permease protein YhdY [Escherichia coli H736] Length = 367 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 34/76 (44%), Positives = 53/76 (69%) Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335 + +A++AE+VR GL A+P+GQ EAA +L L + K LV+LPQA++ +IP L + + L Sbjct: 241 FQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQGLVILPQALKLVIPGLVNTIIALF 300 Query: 336 KNSSLAVAVGFADLVS 351 K++SL + +G DL S Sbjct: 301 KDTSLVIIIGLFDLFS 316 >gi|301028302|ref|ZP_07191562.1| ABC transporter, permease protein [Escherichia coli MS 196-1] gi|299878645|gb|EFI86856.1| ABC transporter, permease protein [Escherichia coli MS 196-1] Length = 367 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 34/76 (44%), Positives = 53/76 (69%) Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335 + +A++AE+VR GL A+P+GQ EAA +L L + K LV+LPQA++ +IP L + + L Sbjct: 241 FQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQGLVILPQALKLVIPGLVNTIIALF 300 Query: 336 KNSSLAVAVGFADLVS 351 K++SL + +G DL S Sbjct: 301 KDTSLVIIIGLFDLFS 316 >gi|295703709|ref|YP_003596784.1| putative amino acid ABC transporter permease [Bacillus megaterium DSM 319] gi|294801368|gb|ADF38434.1| putative amino acid ABC transporter, permease protein [Bacillus megaterium DSM 319] Length = 233 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 53/179 (29%), Positives = 99/179 (55%), Gaps = 21/179 (11%) Query: 217 KALPLLYISTFLI-FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSC 275 + PLL + FL+ FGLP L+L+ +H D + F L IA S Sbjct: 64 RCTPLL-VQLFLVYFGLPQLLLL-----VHIDINSWSRITF------------LVIAFSL 105 Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335 +TAA ++E++RS ++ +GQ EAA ++G+ + ++ R ++LPQA + +P + + ++LL Sbjct: 106 HTAAPLSEVIRSAYFSIDKGQFEAAYSIGMNYFQSLRRIILPQAFVAALPNVGNATISLL 165 Query: 336 KNSSLAVAVGFADLVSVGGTII-NQTGQAI-EIILIWMFIYLSLSIMIALFMNRLNAKI 392 K+++LA ++G D++ I+ N G + EI + +Y S+ I+I + ++ L + Sbjct: 166 KDTALAFSIGIIDIMGQVRLILGNNYGIGMFEIYVTISLVYWSICIVIEIIVSYLEKHL 224 >gi|290961427|ref|YP_003492609.1| binding-protein-dependent transporter subunit [Streptomyces scabiei 87.22] gi|260650953|emb|CBG74071.1| putative binding-protein-dependent transport system subunit [Streptomyces scabiei 87.22] Length = 277 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 67/209 (32%), Positives = 107/209 (51%), Gaps = 25/209 (11%) Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL---VLIALKYQLHF 246 FVF VLG+V++L + G +YI F GLP L + I + L F Sbjct: 81 FVFGLVLGMVIALMRLSSVGPYRWFAG-----VYIEIFR--GLPALLIFIFIGVAVPLAF 133 Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306 I G T + + +AL AA++AE +R+G+ AVP+GQ+EAA +LG + Sbjct: 134 PG------TQIPGGT----YGKVALALGLVAAAYMAETIRAGIQAVPKGQLEAARSLGFS 183 Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA----DLVSVGGTIINQTGQ 362 +A +++PQA R I+PPLT++ + L K+SSL + +G +L G + + T Sbjct: 184 PARAMVSIIVPQAFRIILPPLTNELVLLFKDSSLVLFLGVTLEERELSKYGRDLASTTAN 243 Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAK 391 + IL+ YL ++I + + R+ AK Sbjct: 244 STP-ILVAGLCYLLVTIPLGFVVRRMEAK 271 Score = 37.4 bits (85), Expect = 3.7, Method: Compositional matrix adjust. Identities = 20/77 (25%), Positives = 37/77 (48%) Query: 81 SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140 ++ + I + NT SG + ++G ++ RLS+ W VY+E+FR +P Sbjct: 58 AEQMFPDVITLALKNTVLYTLSGFVFGLVLGMVIALMRLSSVGPYRWFAGVYIEIFRGLP 117 Query: 141 PLVVIFFLYKSVLSVLP 157 L++ F+ +V P Sbjct: 118 ALLIFIFIGVAVPLAFP 134 >gi|86605398|ref|YP_474161.1| cystine ABC transporter, permease protein [Synechococcus sp. JA-3-3Ab] gi|86553940|gb|ABC98898.1| cystine ABC transporter, permease protein [Synechococcus sp. JA-3-3Ab] Length = 234 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 55/180 (30%), Positives = 93/180 (51%), Gaps = 19/180 (10%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 +L LY+S L+ G P + YQ L Q + GS F S +ALS Sbjct: 70 SSLSALYVS--LMRGTPLFLQFLFIYQ------ALPQLGLVFGS-----FTSAVLALSLN 116 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 A+++EI R+G+ A+P GQ EAA ALGL + ++LPQA R ++P + +Q++ + K Sbjct: 117 YGAYMSEIFRAGIQAIPIGQREAAYALGLKPWQTLWCIILPQAFRIVLPDIGNQFIAMQK 176 Query: 337 NSSLAVAVGFADLVS---VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393 +++LA A+ +L+ G +A+ + +W Y L+++++ F RL +A Sbjct: 177 DTALASAIALQELMGRARQAGLPRQHFFEALVVAALW---YWLLTLILSFFQGRLERYLA 233 >gi|325970437|ref|YP_004246628.1| polar amino acid ABC transporter inner membrane subunit [Spirochaeta sp. Buddy] gi|324025675|gb|ADY12434.1| polar amino acid ABC transporter, inner membrane subunit [Spirochaeta sp. Buddy] Length = 217 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 37/122 (30%), Positives = 73/122 (59%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + L+ YT AF +V + ++A+P+ Q EA+++ G ++ + V++PQAM+ +P LT+Q Sbjct: 95 LGLALYTGAFGIAVVEASILAIPKQQSEASMSQGFSYLQTMVHVVIPQAMKIALPSLTNQ 154 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 +NL+KNSS+ + DL+ + ++T L+ +YLS+ + ++ + R+ A Sbjct: 155 AVNLIKNSSVLAMIAGGDLMYRSDSWASETAVYGPTFLVTGLLYLSICLPLSRLVKRMEA 214 Query: 391 KI 392 K+ Sbjct: 215 KV 216 >gi|315655010|ref|ZP_07907914.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Mobiluncus curtisii ATCC 51333] gi|315490666|gb|EFU80287.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Mobiluncus curtisii ATCC 51333] Length = 303 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 41/136 (30%), Positives = 77/136 (56%), Gaps = 20/136 (14%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 + P++ + F+ +GLP AL++Q + +S+++ +S Sbjct: 80 RGTPMILQAVFIYYGLPYFTNNALQFQSMWG-------------------VSIFV-VSIN 119 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 T A+IAE VR G+I+V GQ E A A+G+TH + V+LPQA+R+++P + + ++ +K Sbjct: 120 TGAYIAESVRGGIISVDPGQTEGARAIGMTHFQTMLYVILPQALRNLLPQIGNNFIINIK 179 Query: 337 NSSLAVAVGFADLVSV 352 ++S+ +GF++ SV Sbjct: 180 DTSVMFIIGFSEFFSV 195 >gi|312968399|ref|ZP_07782608.1| general L-amino acid transport system permease protein aapM [Escherichia coli 2362-75] gi|312286617|gb|EFR14528.1| general L-amino acid transport system permease protein aapM [Escherichia coli 2362-75] gi|323189118|gb|EFZ74402.1| general L-amino acid transport system permease protein aapM [Escherichia coli RN587/1] Length = 368 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 34/76 (44%), Positives = 53/76 (69%) Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335 + +A++AE+VR GL A+P+GQ EAA +L L + K LV+LPQA++ +IP L + + L Sbjct: 242 FQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQGLVILPQALKLVIPGLVNTIIALF 301 Query: 336 KNSSLAVAVGFADLVS 351 K++SL + +G DL S Sbjct: 302 KDTSLVIIIGLFDLFS 317 >gi|260889289|ref|ZP_05900552.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Leptotrichia hofstadii F0254] gi|260860700|gb|EEX75200.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Leptotrichia hofstadii F0254] Length = 245 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 34/94 (36%), Positives = 66/94 (70%), Gaps = 5/94 (5%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IAL +AA++ E +RSG+ ++ +GQMEAA A G+ +R A +++PQA+++I+P L ++ Sbjct: 121 IALGLNSAAYVEETIRSGIESIDKGQMEAARATGMPYRMAMNEIIMPQAIKNILPALLNE 180 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364 ++NL K +++ VG+ +V + T+ +++ QA+ Sbjct: 181 FINLFKETAV---VGYISVVDI--TMNSKSLQAV 209 >gi|253576621|ref|ZP_04853949.1| polar amino acid ABC transporter, inner membrane subunit [Paenibacillus sp. oral taxon 786 str. D14] gi|251844035|gb|EES72055.1| polar amino acid ABC transporter, inner membrane subunit [Paenibacillus sp. oral taxon 786 str. D14] Length = 251 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 39/132 (29%), Positives = 77/132 (58%), Gaps = 1/132 (0%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F +++I +S T A++AEIVR G+ +V +GQ EAA A+G+TH + R V+LPQ +R I+P Sbjct: 116 FAAIFI-VSINTGAYMAEIVRGGIYSVDKGQFEAAHAIGMTHWQTMRNVVLPQVIRHILP 174 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 +Q++ +K++S+ + ++L + +I + E + +YL +++ + + Sbjct: 175 ATGNQFIINIKDTSVLNVISVSELYFMTKSIAGNNFRYFESFFVASVLYLIMTLTVTKIL 234 Query: 386 NRLNAKIALKEK 397 R+ ++ E Sbjct: 235 QRIEKRLDGPES 246 >gi|218658873|ref|ZP_03514803.1| general L-amino acid ABC transporter, permease protein [Rhizobium etli IE4771] Length = 216 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 30/82 (36%), Positives = 57/82 (69%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I +S + +A++AE++R GL A+P+GQ E A +LGL + + RLV++PQA++ +IP + + Sbjct: 119 IGVSIFASAYMAEVIRGGLQAIPKGQFEGADSLGLGYWQKMRLVIMPQAIKLVIPGIVNT 178 Query: 331 YLNLLKNSSLAVAVGFADLVSV 352 ++ + K++SL + DL+ + Sbjct: 179 FIGMFKDTSLVSIISMFDLLGI 200 >gi|86609572|ref|YP_478334.1| cystine ABC transporter, permease protein [Synechococcus sp. JA-2-3B'a(2-13)] gi|86558114|gb|ABD03071.1| cystine ABC transporter, permease protein [Synechococcus sp. JA-2-3B'a(2-13)] Length = 248 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 55/180 (30%), Positives = 93/180 (51%), Gaps = 19/180 (10%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 +L LY+S L+ G P + YQ L Q + GS F S +ALS Sbjct: 84 SSLSALYVS--LMRGTPLFLQFLFIYQ------ALPQLGLVFGS-----FTSAVLALSLN 130 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 A+++EI R+G+ A+P GQ EAA ALGL + ++LPQA R ++P + +Q++ + K Sbjct: 131 YGAYMSEIFRAGIQAIPIGQREAAYALGLKPWQTLWCIILPQAFRIVLPDIGNQFIAMQK 190 Query: 337 NSSLAVAVGFADLVS---VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393 +++LA A+ +L+ G +A+ + +W Y L+++++ F RL +A Sbjct: 191 DTALASAIALQELMGRARQAGLPRQHFFEALVVAALW---YWLLTLILSFFQGRLERYLA 247 >gi|320095231|ref|ZP_08026931.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Actinomyces sp. oral taxon 178 str. F0338] gi|319977835|gb|EFW09478.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Actinomyces sp. oral taxon 178 str. F0338] Length = 225 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 34/85 (40%), Positives = 55/85 (64%) Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333 + + AA + ++VR LI++PR Q E+A ALGL R+A R V+LPQ +R + PP + Sbjct: 100 TLWGAAEMGDLVRGALISIPRHQYESAEALGLDARQAMRFVILPQTVRRLAPPAVNLVTR 159 Query: 334 LLKNSSLAVAVGFADLVSVGGTIIN 358 ++K +SL V +G +++ VG II+ Sbjct: 160 MVKTTSLVVLIGVVEVLKVGQQIID 184 >gi|315300935|gb|EFU60155.1| ABC transporter, permease protein [Escherichia coli MS 16-3] Length = 347 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 60/220 (27%), Positives = 106/220 (48%), Gaps = 28/220 (12%) Query: 132 YVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV 191 Y+ V+ I PL+V + +Y L + + R TLT+ + Sbjct: 105 YIAVWAVIYPLIVWWLMYGGFLGLERV-------------ETRQWGGLTLTLIIASVGIA 151 Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251 + GI+L+L R H + L +++I + G+P LI + + P+ Sbjct: 152 GALPWGILLAL-----GRRSHMPIVRILSVIFIEFWR--GVP---LITVLFMSSVMLPL- 200 Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311 F+ T + + + + + +A++AE+VR GL A+P+GQ EAA +L L + K Sbjct: 201 ----FMAEGTSIDKLIRALVGVILFQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQ 256 Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 LV++PQA++ +IP L + + L K++SL + +G DL S Sbjct: 257 GLVIMPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFS 296 >gi|312958425|ref|ZP_07772945.1| amino acid ABC transporter, permease protein [Pseudomonas fluorescens WH6] gi|311286968|gb|EFQ65529.1| amino acid ABC transporter, permease protein [Pseudomonas fluorescens WH6] Length = 229 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 63/198 (31%), Positives = 103/198 (52%), Gaps = 27/198 (13%) Query: 195 VLGIVLS--LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252 +LG++L+ L R S+ ++ ++ LP YI F G P LV + L Y L Sbjct: 29 ILGLILAIPLGIARSSKRWYVRS---LPYAYI--FFFRGTPLLVQLFLVYY------GLA 77 Query: 253 QFNFIGGSTVSPEFMSLYI---------ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 QF+ I S FM Y+ ++ +TAA+IAEI+R + A+P G++EAA AL Sbjct: 78 QFDSIRSS-----FMWTYLRDPFWCAPATMTLHTAAYIAEILRGAIQAIPPGEIEAARAL 132 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363 G++ K ++LP+A R +P +++ + +LK SSLA V +L + TII + Sbjct: 133 GMSRPKTLLYIILPRAARIGLPAYSNEVILMLKASSLASTVTLLELTGMARTIIARNYLT 192 Query: 364 IEIILIWMFIYLSLSIMI 381 +E+ YL +S ++ Sbjct: 193 VEMFFTAGVFYLLISYLL 210 >gi|291486571|dbj|BAI87646.1| hypothetical protein BSNT_06059 [Bacillus subtilis subsp. natto BEST195] Length = 224 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 58/190 (30%), Positives = 100/190 (52%), Gaps = 15/190 (7%) Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256 G++L+L H+ L LYIS F G+PTLV + L +++ P L F Sbjct: 38 GLILALITKNKIPVLHQ-----LSKLYISFFR--GVPTLVQLFL---IYYGLPQL--FPE 85 Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316 + T + I LS AA++AEI R+ L +V GQ+EA +++G+T +A R ++L Sbjct: 86 MSKMTA---LTAAIIGLSLKNAAYLAEIFRAALNSVDDGQLEACLSVGMTKFQAYRRIIL 142 Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376 PQA+R+ IP + ++ LLK +SLA +G ++ + G + + E L +Y Sbjct: 143 PQAIRNAIPATGNTFIGLLKETSLAFTLGVMEMFAQGKMYASGNLKYFETYLAVAIVYWI 202 Query: 377 LSIMIALFMN 386 L+++ ++ + Sbjct: 203 LTMIYSMLQD 212 >gi|152994193|ref|YP_001339028.1| polar amino acid ABC transporter inner membrane subunit [Marinomonas sp. MWYL1] gi|150835117|gb|ABR69093.1| polar amino acid ABC transporter, inner membrane subunit [Marinomonas sp. MWYL1] Length = 452 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 33/89 (37%), Positives = 58/89 (65%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +A+ + A++AE +R GL A+P+GQ EAA LGL + L++LPQA+R +IP + + Sbjct: 324 VAVCLFAGAYMAENIRGGLQAIPKGQYEAAATLGLGYLHTMVLIILPQALRMMIPNIMTS 383 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQ 359 +++LLK+++L +G D++ + I N Sbjct: 384 FISLLKDTTLVSIIGLFDIMLMARNIAND 412 >gi|56695435|ref|YP_165783.1| glutamate/glutamine/aspartate/asparagine ABC transporter, permease protein [Ruegeria pomeroyi DSS-3] gi|56677172|gb|AAV93838.1| glutamate/glutamine/aspartate/asparagine ABC transporter, permease protein [Ruegeria pomeroyi DSS-3] Length = 437 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 35/99 (35%), Positives = 61/99 (61%), Gaps = 3/99 (3%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I ++ + AA++AE++R GL A+P+GQ E A +LGL + +A RL+++PQA++ IP + S Sbjct: 308 IMVTLFAAAYMAEVIRGGLAALPKGQYEGADSLGLNYWQAQRLIIMPQALKISIPGIVST 367 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTI---INQTGQAIEI 366 ++ + K++ L +G D + + I N G EI Sbjct: 368 FIGVFKDTVLVSIIGLLDPLGLSNAIRADANWNGIVWEI 406 >gi|330686403|gb|EGG98003.1| ABC transporter, permease protein [Staphylococcus epidermidis VCU121] Length = 227 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 52/199 (26%), Positives = 107/199 (53%), Gaps = 25/199 (12%) Query: 191 VFSFVLGIVLSLFATRLSRHF------HEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244 + + +LG++L++ + + ++ ++ PLL + F LP +LI Sbjct: 29 ILATILGLILTIIRIKQVPYLSTCVRIYQSFMRSTPLLLQLFLVYFALPQFLLIFHININ 88 Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304 HFD+ + +A S ++AA+++E+ R+G ++V Q+EA +++G Sbjct: 89 HFDR-----------------LFFIILAFSLHSAAYLSEVFRAGYLSVDYRQIEAGLSVG 131 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII-NQTGQA 363 L++ + + +++PQA+R+ IP LT+Q + L+K++SLA +G D++ II N G Sbjct: 132 LSYPRILKDIIIPQALRNSIPNLTTQIIELIKDTSLAFTIGIIDMMGQVQLIIGNNYGLG 191 Query: 364 -IEIILIWMFIYLSLSIMI 381 +E+ ++ IY L+++I Sbjct: 192 MLEVYVVISIIYWLLALII 210 >gi|326794956|ref|YP_004312776.1| polar amino acid ABC transporter inner membrane subunit [Marinomonas mediterranea MMB-1] gi|326545720|gb|ADZ90940.1| polar amino acid ABC transporter, inner membrane subunit [Marinomonas mediterranea MMB-1] Length = 456 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 32/89 (35%), Positives = 58/89 (65%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +A+ + A++AE +R GL A+P+GQ EAA LG + + L++LPQA+R +IP + + Sbjct: 328 VAVCLFAGAYMAENIRGGLQAIPKGQFEAATTLGFGYWQTMFLIVLPQALRMMIPNIMTS 387 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQ 359 +++LLK+++L +G D++ + I N Sbjct: 388 FISLLKDTTLVSIIGLFDIMLMARNIAND 416 >gi|260596108|ref|YP_003208679.1| Inner membrane amino-acid ABC transporter permease yhdY [Cronobacter turicensis z3032] gi|260215285|emb|CBA27215.1| Inner membrane amino-acid ABC transporter permease protein yhdY [Cronobacter turicensis z3032] Length = 365 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 34/76 (44%), Positives = 53/76 (69%) Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335 + +A++AE+VR GL A+P+GQ EAA +L L + K LV+LPQA++ +IP L + + L Sbjct: 239 FQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQGLVILPQALKLVIPGLVNTIIALF 298 Query: 336 KNSSLAVAVGFADLVS 351 K++SL + +G DL S Sbjct: 299 KDTSLVIIIGLFDLFS 314 >gi|222082709|ref|YP_002542074.1| amino acid ABC transporter [Agrobacterium radiobacter K84] gi|221727388|gb|ACM30477.1| amino acid ABC transporter [Agrobacterium radiobacter K84] Length = 220 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 52/175 (29%), Positives = 94/175 (53%), Gaps = 13/175 (7%) Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281 LY++ +I LP LVL+ Y F P Q F G + S LS Y+ A++ Sbjct: 59 LYVT--IIRNLPILVLVLFAY---FALP---QMGFRIG-----KVQSFIAVLSIYSGAYL 105 Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341 AE+ R+GL+++P+G EA +A+GLT + ++ P R+++P L+S ++L K++SLA Sbjct: 106 AEVFRAGLLSIPKGLSEAGLAIGLTPMQIRVSIIAPLMFRNVLPSLSSTVISLFKDTSLA 165 Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 A+ +L I ++ + IE L+ +Y+ +++A M + ++A+ Sbjct: 166 AAIAVPELTFEARKINVESFRVIETWLVTSGLYVFTCVVLAALMRVVERRLAVPR 220 >gi|239815856|ref|YP_002944766.1| polar amino acid ABC transporter inner membrane subunit [Variovorax paradoxus S110] gi|239802433|gb|ACS19500.1| polar amino acid ABC transporter, inner membrane subunit [Variovorax paradoxus S110] Length = 221 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 48/183 (26%), Positives = 93/183 (50%), Gaps = 23/183 (12%) Query: 211 FHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY 270 F+ + +A+P+L + ++ F P LV G T +P F + Sbjct: 57 FYIDSMRAIPVLVVLVWMYFAFPLLV----------------------GFTFAP-FWAAV 93 Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IAL+ + AA+ AE++R+G+ ++ GQ AA+ALG++ + R VLLPQA ++P S Sbjct: 94 IALTLHIAAYAAEVIRAGIESIRPGQTRAALALGMSRAQLLRKVLLPQATIRMLPAFGSI 153 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 +K++++A + +L+ T+ Q+ + +E+ M Y ++ + ++RL Sbjct: 154 LTIAIKDTAIATVIAVPELMHRAETVAGQSYRPVEVFTAVMVAYFAILFPVTRGIDRLYH 213 Query: 391 KIA 393 ++A Sbjct: 214 RVA 216 >gi|188533380|ref|YP_001907177.1| Putative ABC transporter, permease [Erwinia tasmaniensis Et1/99] gi|188028422|emb|CAO96283.1| Putative ABC transporter, permease [Erwinia tasmaniensis Et1/99] Length = 299 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 39/134 (29%), Positives = 75/134 (55%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 +F + L+ AA+ AEIVR G+ V GQ EAA ALGL + T ++LPQA+R+II Sbjct: 146 QFSTAVTGLTLVQAAYTAEIVRGGITGVDHGQFEAAAALGLPSSRRTLRIILPQALRAII 205 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 P ++ ++L K +++ + +L + N+T Q I ++++ YL ++ ++++ Sbjct: 206 PSGFNEIISLAKGTAMVYVLAMPELFYTIQMVYNRTQQVIPLLMVAAVWYLLITTLLSVV 265 Query: 385 MNRLNAKIALKEKK 398 + + ++A + Sbjct: 266 QHYVERRLARSSAR 279 >gi|50119206|ref|YP_048373.1| putative amino acid transport system permease [Pectobacterium atrosepticum SCRI1043] gi|49609732|emb|CAG73166.1| putative amino-acid transport system permease protein [Pectobacterium atrosepticum SCRI1043] Length = 221 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 55/203 (27%), Positives = 103/203 (50%), Gaps = 22/203 (10%) Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249 F+F LGI+++L R + K K L Y+ ++I G P LV + L + Sbjct: 31 FIFGLALGILIALV-----RLYGPKPLKWLGDFYV--WVIRGTPLLVQLFLIF------- 76 Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309 + F + I + A+ +EIVR +++VP+GQ AA +LG+ R+ Sbjct: 77 ----YGLPSAGITLDAFPAALIGFTVSVGAYSSEIVRGAILSVPKGQWSAAYSLGMNGRQ 132 Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369 A R V+ PQ++ +PPL++ +++L+K++SLA + ++ I++ T + + + + Sbjct: 133 AIRWVIFPQSVFVSLPPLSNTFISLIKDTSLAAVITVPEMFLSAQRIVSVTYEPLILYVE 192 Query: 370 WMFIYLSLSIMIALFMNRLNAKI 392 IYL M + +++L AK+ Sbjct: 193 AALIYL----MFSTVLSQLQAKL 211 >gi|331015348|gb|EGH95404.1| glutamine ABC transporter, permease protein [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 247 Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 42/133 (31%), Positives = 74/133 (55%), Gaps = 10/133 (7%) Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286 +++ G+P L++I Y F P+L N G F ++ L Y +A++ EI+R Sbjct: 69 YVMRGIPLLMVIFWTY---FLVPLLIGHNITG-------FTTMLCTLVVYQSAYLCEIIR 118 Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346 + A+P GQ EA+ ALG+ + + T V+LPQA+ + +P L SQ+++++K +SL + Sbjct: 119 GAIQALPTGQYEASRALGMGYLRTTVWVILPQALYNALPSLISQFISIIKETSLGYVINV 178 Query: 347 ADLVSVGGTIINQ 359 ++ I NQ Sbjct: 179 QEVTFAANQINNQ 191 >gi|170684312|ref|YP_001745540.1| His/Glu/Gln/Arg/opine ABC transporter permease [Escherichia coli SMS-3-5] gi|170522030|gb|ACB20208.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Escherichia coli SMS-3-5] Length = 367 Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 34/76 (44%), Positives = 53/76 (69%) Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335 + +A++AE+VR GL A+P+GQ EAA +L L + K LV+LPQA++ +IP L + + L Sbjct: 241 FQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQGLVILPQALKLVIPGLVNTIIALF 300 Query: 336 KNSSLAVAVGFADLVS 351 K++SL + +G DL S Sbjct: 301 KDTSLVIIIGLFDLFS 316 >gi|325695481|gb|EGD37381.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK150] Length = 230 Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 39/122 (31%), Positives = 72/122 (59%), Gaps = 2/122 (1%) Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 AA IAE+ ++ +AVP+GQ EA +++GL + ++LPQA R +P LT+ LNL+++ Sbjct: 109 AAMIAEVFKAAYLAVPKGQTEAGLSIGLAPVQTFLRIVLPQAFRIALPNLTTALLNLMRD 168 Query: 338 SSLAVAVGFADLVSVGGTII--NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395 ++LA +G D++ G +I N ++E IY ++++++L L + +K Sbjct: 169 AALAYTIGAVDVMGAGQNLISRNLGNYSLETYTAVALIYWGIALVVSLASQLLEKSLIVK 228 Query: 396 EK 397 E+ Sbjct: 229 ER 230 >gi|322420999|ref|YP_004200222.1| polar amino acid ABC transporter inner membrane subunit [Geobacter sp. M18] gi|320127386|gb|ADW14946.1| polar amino acid ABC transporter, inner membrane subunit [Geobacter sp. M18] Length = 339 Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 39/142 (27%), Positives = 74/142 (52%), Gaps = 24/142 (16%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 + PLL F+ +GLP+L G T P F + + L Sbjct: 183 RGTPLLLQLFFIYYGLPSL-----------------------GVTFKP-FTAAILGLGLN 218 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 +A++ EI+R G+ ++ GQMEAA A+G+T+ +A R V++PQ + ++PP+ ++++ L+K Sbjct: 219 YSAYLGEIIRGGIQSIEHGQMEAAKAIGMTYWQAMRRVIIPQTYKRLMPPIGNEFIALIK 278 Query: 337 NSSLAVAVGFADLVSVGGTIIN 358 +++L + +L+ + N Sbjct: 279 DTALVSTIAMVELMRSADQMFN 300 >gi|239978685|ref|ZP_04701209.1| ABC transporter permease [Streptomyces albus J1074] gi|291450580|ref|ZP_06589970.1| ABC transporter permease [Streptomyces albus J1074] gi|291353529|gb|EFE80431.1| ABC transporter permease [Streptomyces albus J1074] Length = 304 Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 66/208 (31%), Positives = 104/208 (50%), Gaps = 27/208 (12%) Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233 RGL LT+ A + V FVLG +L++ +R K++ YI F P Sbjct: 82 RGLG---LTLWLTALVMVLGFVLGTLLAV-----ARMSANPVLKSVSWGYIWFFR--STP 131 Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY------------IALSCYTAAFI 281 LV + + + P LG G PEF+++ I L+ + AA+ Sbjct: 132 VLVQLLFWFNIGALYPQLGL-----GIPFGPEFLTVRTVNLLGPLTVALIGLTLHEAAYA 186 Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341 AE+VR GL++V RGQ EAA +LGL + R ++LPQAMR+I+PP + + LK +S+ Sbjct: 187 AEVVRGGLLSVDRGQTEAAQSLGLGRWRRLRRIVLPQAMRAIVPPAGNMLIGTLKGTSIV 246 Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILI 369 + DL+ + ++T Q I ++L+ Sbjct: 247 SVIAVQDLLYSVQLVYHRTYQVIPLLLV 274 Score = 37.4 bits (85), Expect = 3.7, Method: Compositional matrix adjust. Identities = 30/95 (31%), Positives = 47/95 (49%), Gaps = 4/95 (4%) Query: 81 SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140 +D A+L G T WL M+ ++GTL+ R+SAN ++ + Y+ FR+ P Sbjct: 72 ADYFTTPAVLRGLGLTLWLTALVMVLGFVLGTLLAVARMSANPVLKSVSWGYIWFFRSTP 131 Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFG-MFLNNR 174 LV + F + + L P + +PFG FL R Sbjct: 132 VLVQLLFWFN--IGAL-YPQLGLGIPFGPEFLTVR 163 >gi|188532409|ref|YP_001906206.1| Putative transport system permease protein [Erwinia tasmaniensis Et1/99] gi|188027451|emb|CAO95298.1| Putative transport system permease protein [Erwinia tasmaniensis Et1/99] Length = 366 Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 34/76 (44%), Positives = 53/76 (69%) Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335 + +A++AE+VR GL A+P+GQ EAA +L L + K LV+LPQA++ +IP L + + L Sbjct: 240 FQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQGLVILPQALKLVIPGLVNTIIALF 299 Query: 336 KNSSLAVAVGFADLVS 351 K++SL + +G DL S Sbjct: 300 KDTSLVIIIGLFDLFS 315 >gi|315657127|ref|ZP_07910011.1| amino acid (glutamine) ABC superfamily ATP binding cassette transporter substrate binding protein [Mobiluncus curtisii subsp. holmesii ATCC 35242] gi|315492230|gb|EFU81837.1| amino acid (glutamine) ABC superfamily ATP binding cassette transporter substrate binding protein [Mobiluncus curtisii subsp. holmesii ATCC 35242] Length = 303 Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 41/136 (30%), Positives = 77/136 (56%), Gaps = 20/136 (14%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 + P++ + F+ +GLP AL++Q + +S+++ +S Sbjct: 80 RGTPMILQAVFIYYGLPYFTNNALQFQSMWG-------------------VSIFV-VSIN 119 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 T A+IAE VR G+I+V GQ E A A+G+TH + V+LPQA+R+++P + + ++ +K Sbjct: 120 TGAYIAESVRGGIISVDPGQTEGARAIGMTHFQTMLYVILPQALRNLLPQIGNNFIINIK 179 Query: 337 NSSLAVAVGFADLVSV 352 ++S+ +GF++ SV Sbjct: 180 DTSVMFIIGFSEFFSV 195 >gi|304389822|ref|ZP_07371781.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|304326998|gb|EFL94237.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Mobiluncus curtisii subsp. curtisii ATCC 35241] Length = 303 Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 41/136 (30%), Positives = 77/136 (56%), Gaps = 20/136 (14%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 + P++ + F+ +GLP AL++Q + +S+++ +S Sbjct: 80 RGTPMILQAVFIYYGLPYFTNNALQFQSMWG-------------------VSIFV-VSIN 119 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 T A+IAE VR G+I+V GQ E A A+G+TH + V+LPQA+R+++P + + ++ +K Sbjct: 120 TGAYIAESVRGGIISVDPGQTEGARAIGMTHFQTMLYVILPQALRNLLPQIGNNFIINIK 179 Query: 337 NSSLAVAVGFADLVSV 352 ++S+ +GF++ SV Sbjct: 180 DTSVMFIIGFSEFFSV 195 >gi|163744544|ref|ZP_02151904.1| amino acid ABC transporter, permease protein [Oceanibulbus indolifex HEL-45] gi|161381362|gb|EDQ05771.1| amino acid ABC transporter, permease protein [Oceanibulbus indolifex HEL-45] Length = 217 Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 40/121 (33%), Positives = 68/121 (56%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I L +A+ AE R+G+ A+ +GQ+EAA ++G+T R R V+LPQA+R ++PP + Sbjct: 93 IGLGLAYSAYQAENFRAGIEAIDKGQIEAAYSIGMTDRMIMRRVILPQAIRIVLPPFGNT 152 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 + LLK+SSL + A+L G I + T I + + +YL +++ + L Sbjct: 153 IIMLLKDSSLVSTITVAELTRQGQLIASSTFDNITVYTLVAIMYLGMALPLTYLTRNLEK 212 Query: 391 K 391 + Sbjct: 213 R 213 >gi|291529899|emb|CBK95484.1| amino acid ABC transporter membrane protein, PAAT family (TC 3.A.1.3.-) [Eubacterium siraeum 70/3] Length = 247 Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 68/248 (27%), Positives = 118/248 (47%), Gaps = 27/248 (10%) Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS 208 Y+ + L + I+ G+ L N PT+ KIF F+ + I L L L Sbjct: 4 YRKIKEELNMTGEQIMKVTGILLENL---IPTI------KIFGFTLLFSIPLGLIVAAL- 53 Query: 209 RHFHEKTGKALPLLYISTFLIF---GLP-TLVLIALKYQLHFDKPVL-GQFNFIGG--ST 261 K + P+ +++ I G P L +I + Y L F K G F+ S Sbjct: 54 -----KMCRFKPISWLTNLYILIMRGTPLMLQIIVVYYALPFLKTATKGSGGFVESLLSG 108 Query: 262 VSPE-----FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316 V P F + IA AA+ AEI R G+ ++PRGQ EAA ALG+T + ++L Sbjct: 109 VDPAAESFMFTMVIIAFVLNYAAYFAEIFRGGIESIPRGQYEAAAALGMTKAQTFFRIIL 168 Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376 PQ ++ I+P +++ + L+K++SLA V +++++ + + + + +F ++ Sbjct: 169 PQVIKRIVPASSNEVITLVKDTSLANVVAYSEIMLAAKQQMMNYSSLVPLFIAGVFYFVM 228 Query: 377 LSIMIALF 384 +++ ALF Sbjct: 229 ATVLTALF 236 >gi|330965185|gb|EGH65445.1| glutamine ABC transporter, permease protein [Pseudomonas syringae pv. actinidiae str. M302091] Length = 246 Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 42/133 (31%), Positives = 74/133 (55%), Gaps = 10/133 (7%) Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286 +++ G+P L++I Y F P+L N G F ++ L Y +A++ EI+R Sbjct: 69 YVMRGIPLLMVIFWTY---FLVPLLIGHNITG-------FTTMLCTLVVYQSAYLCEIIR 118 Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346 + A+P GQ EA+ ALG+ + + T V+LPQA+ + +P L SQ+++++K +SL + Sbjct: 119 GAIQALPTGQYEASRALGMGYLRTTVWVILPQALYNALPSLISQFISIIKETSLGYVINV 178 Query: 347 ADLVSVGGTIINQ 359 ++ I NQ Sbjct: 179 QEVTFAANQINNQ 191 >gi|256392946|ref|YP_003114510.1| polar amino acid ABC transporter inner membrane subunit [Catenulispora acidiphila DSM 44928] gi|256359172|gb|ACU72669.1| polar amino acid ABC transporter, inner membrane subunit [Catenulispora acidiphila DSM 44928] Length = 352 Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 47/155 (30%), Positives = 80/155 (51%), Gaps = 15/155 (9%) Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304 HFD+ + ++ E + + LS AA+ AE+VR+GL++V +GQ EAA +LG Sbjct: 177 HFDE-----------NRLATELVVATVGLSLNEAAYAAEVVRAGLLSVDQGQHEAAASLG 225 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV----SVGGTIINQT 360 L R ++LPQA+R+I+P +Q + L+K +SL V DL ++G T Sbjct: 226 LPRGYQFRRIVLPQALRAIVPAYVNQLIGLIKGTSLVFYVSLLDLFGQVQTMGSTYPADI 285 Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395 + + W I S+ + ++ R ++ AL+ Sbjct: 286 VPLLLVATAWYVILTSVVSAVQFYVERRYSRGALR 320 >gi|218672038|ref|ZP_03521707.1| nopaline ABC transporter, permease protein [Rhizobium etli GR56] Length = 242 Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 49/156 (31%), Positives = 84/156 (53%), Gaps = 2/156 (1%) Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285 T+ G P LV + L Y P++ Q +F+ P F +IA + +AA E++ Sbjct: 50 TYAFRGTPLLVQLFLIYYGIGQLPLVRQ-SFLWAVMREP-FWCAFIAFTLNSAAHTTEVL 107 Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345 R G+ AVPRGQ+EAA ALGL+ RL++ P +R +P ++ + +LK SSLA + Sbjct: 108 RGGIQAVPRGQIEAAKALGLSRFHTARLIVFPLTLRIALPAYANEVVGMLKASSLASTIT 167 Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 ++ + ++++T E+ + YL L+++I Sbjct: 168 LLEVTGLARQLVSETFAPYEVFIAAGAFYLLLTLLI 203 >gi|213966879|ref|ZP_03395029.1| glutamine ABC transporter, permease protein [Pseudomonas syringae pv. tomato T1] gi|301381562|ref|ZP_07229980.1| glutamine ABC transporter, permease protein [Pseudomonas syringae pv. tomato Max13] gi|302061682|ref|ZP_07253223.1| glutamine ABC transporter, permease protein [Pseudomonas syringae pv. tomato K40] gi|302131521|ref|ZP_07257511.1| glutamine ABC transporter, permease protein [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213928201|gb|EEB61746.1| glutamine ABC transporter, permease protein [Pseudomonas syringae pv. tomato T1] Length = 246 Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 42/133 (31%), Positives = 74/133 (55%), Gaps = 10/133 (7%) Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286 +++ G+P L++I Y F P+L N G F ++ L Y +A++ EI+R Sbjct: 69 YVMRGIPLLMVIFWTY---FLVPLLIGHNITG-------FTTMLCTLVVYQSAYLCEIIR 118 Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346 + A+P GQ EA+ ALG+ + + T V+LPQA+ + +P L SQ+++++K +SL + Sbjct: 119 GAIQALPTGQYEASRALGMGYLRTTVWVILPQALYNALPSLISQFISIIKETSLGYVINV 178 Query: 347 ADLVSVGGTIINQ 359 ++ I NQ Sbjct: 179 QEVTFAANQINNQ 191 >gi|167900039|ref|ZP_02487440.1| glutamine ABC transporter permease protein [Burkholderia pseudomallei 7894] Length = 235 Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 56/186 (30%), Positives = 93/186 (50%), Gaps = 17/186 (9%) Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252 F++G++ +F R + L +YI LI G P +V + L+F P+L Sbjct: 50 GFLVGMIAGMF-----RAYGPAVLNVLAQVYIE--LIRGTPIVVQVMF---LYFALPLLA 99 Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312 G S +A++ + A++AE+VR L+++P+G EA +A+GL+ + Sbjct: 100 HVRIDGLSAA-------VVAITLNSGAYLAEVVRGALLSIPKGLTEAGLAMGLSMPRVLV 152 Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372 ++ P A R +I PL +Q + LK+ SL + +G +L G II QA+EI Sbjct: 153 KIVGPLAFRRLIAPLGNQCIVSLKDMSLFIVIGVGELTRKGQEIIAGNFQAVEIWTAVAA 212 Query: 373 IYLSLS 378 IYL L+ Sbjct: 213 IYLVLT 218 >gi|330877714|gb|EGH11863.1| glutamine ABC transporter, permease protein [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 247 Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 42/133 (31%), Positives = 74/133 (55%), Gaps = 10/133 (7%) Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286 +++ G+P L++I Y F P+L N G F ++ L Y +A++ EI+R Sbjct: 69 YVMRGIPLLMVIFWTY---FLVPLLIGHNITG-------FTTMLCTLVVYQSAYLCEIIR 118 Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346 + A+P GQ EA+ ALG+ + + T V+LPQA+ + +P L SQ+++++K +SL + Sbjct: 119 GAIQALPTGQYEASRALGMGYVRTTVWVILPQALYNALPSLISQFISIIKETSLGYVINV 178 Query: 347 ADLVSVGGTIINQ 359 ++ I NQ Sbjct: 179 QEVTFAANQINNQ 191 >gi|298486962|ref|ZP_07005015.1| glutamate/aspartate transport system permease protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298158524|gb|EFH99591.1| glutamate/aspartate transport system permease protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 246 Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 42/133 (31%), Positives = 74/133 (55%), Gaps = 10/133 (7%) Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286 +++ G+P L++I Y F P+L N G F ++ L Y +A++ EI+R Sbjct: 69 YVMRGIPLLMVIFWTY---FLVPLLIGHNITG-------FTTMLCTLVVYQSAYLCEIIR 118 Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346 + A+P GQ EA+ ALG+ + + T V+LPQA+ + +P L SQ+++++K +SL + Sbjct: 119 GAIQALPAGQYEASRALGMGYMRTTVWVILPQALYNALPSLISQFISIIKETSLGYVINV 178 Query: 347 ADLVSVGGTIINQ 359 ++ I NQ Sbjct: 179 QEVTFAANQINNQ 191 >gi|293603168|ref|ZP_06685601.1| ABC superfamily ATP binding cassette transporter, membrane protein [Achromobacter piechaudii ATCC 43553] gi|292818399|gb|EFF77447.1| ABC superfamily ATP binding cassette transporter, membrane protein [Achromobacter piechaudii ATCC 43553] Length = 221 Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 54/186 (29%), Positives = 101/186 (54%), Gaps = 17/186 (9%) Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240 +T+ +A V S +LG+V++L R + + + + YI + + +P LV++ Sbjct: 21 ITIALSAITAVSSILLGLVIALL-----RLYGPRWLRMALVFYIDS--MRAIPVLVVLVW 73 Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300 Y F P+L NF +P F + +AL+ + AA+ AE++R+G+ +V GQM A Sbjct: 74 IY---FAFPLLAGVNF------AP-FWAALVALTLHIAAYSAEVIRAGIESVRPGQMRAG 123 Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 +ALG++ +A R ++LPQA ++P S +K++++A + +L+ TI Q+ Sbjct: 124 LALGMSRAQALRKIILPQATIRMLPAFGSVLTVAIKDTAIATVIAVPELMHKAETIAGQS 183 Query: 361 GQAIEI 366 + IE+ Sbjct: 184 YRPIEV 189 >gi|298529735|ref|ZP_07017138.1| polar amino acid ABC transporter, inner membrane subunit [Desulfonatronospira thiodismutans ASO3-1] gi|298511171|gb|EFI35074.1| polar amino acid ABC transporter, inner membrane subunit [Desulfonatronospira thiodismutans ASO3-1] Length = 229 Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 59/177 (33%), Positives = 91/177 (51%), Gaps = 13/177 (7%) Query: 222 LYISTFLIFGLPTLVLIAL------KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSC 275 +Y TF G P LV I L ++Q+ D +G ++F SP F S+ +AL+ Sbjct: 51 VYAFTFYFRGTPLLVQIFLIYYGSGQFQVFLDS--VGLWHFFK----SPWFCSV-LALTL 103 Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335 TAA+ AEI R G+ VPRG++EAA A G++ R +++P+A+R P T++ + LL Sbjct: 104 NTAAYSAEIFRGGIQGVPRGEVEAARACGMSGLLLYRRIVIPKALRIAWPAYTNEVIFLL 163 Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 + SSL + D+ V I ++ E+ L IYL L I R+ +I Sbjct: 164 QASSLVSIITVMDITGVAREISARSFAFYELFLAAAAIYLVLVYGILWIFKRIENRI 220 >gi|283788087|ref|YP_003367952.1| ABC transporter, permease protein [Citrobacter rodentium ICC168] gi|282951541|emb|CBG91240.1| ABC transporter, permease protein [Citrobacter rodentium ICC168] Length = 368 Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 34/76 (44%), Positives = 53/76 (69%) Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335 + +A++AE+VR GL A+P+GQ EAA +L L + K LV+LPQA++ +IP L + + L Sbjct: 242 FQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQGLVILPQALKLVIPGLVNTIIALF 301 Query: 336 KNSSLAVAVGFADLVS 351 K++SL + +G DL S Sbjct: 302 KDTSLVIIIGLFDLFS 317 >gi|261821755|ref|YP_003259861.1| polar amino acid ABC transporter inner membrane protein [Pectobacterium wasabiae WPP163] gi|261605768|gb|ACX88254.1| polar amino acid ABC transporter, inner membrane subunit [Pectobacterium wasabiae WPP163] Length = 321 Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 62/215 (28%), Positives = 110/215 (51%), Gaps = 14/215 (6%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 VFS + G L+L RLS + T L LYI F L +++I + +D+ Sbjct: 90 VFSIIFGTALAL--ARLSPSYLLST---LSWLYIWLFRSLPLILVLIILYNFSYLYDELA 144 Query: 251 LG----QFNFIGGSTVS--PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304 LG F+ T+ +F + L+ +A+ AEI+R G++ V GQ EA+ ALG Sbjct: 145 LGVPFTSIIFLRYPTIDLLDQFSVAVLGLTLVQSAYTAEIIRGGILGVDAGQFEASAALG 204 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364 L + T ++LPQA+RSI+P ++ ++L K +S+ + +L I N+T Q I Sbjct: 205 LPGGRRTVRIILPQALRSILPTGFNEIISLAKGTSIVYVLALPELFYTVQVIYNRTQQVI 264 Query: 365 EIIL---IWMFIYLSLSIMIALFMNRLNAKIALKE 396 +++ IW + ++ ++ ++ R ++ A++E Sbjct: 265 PLLMVATIWYLLITTVLSIVQYYVERYVSRGAVRE 299 >gi|218510923|ref|ZP_03508801.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium etli Brasil 5] Length = 250 Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 33/97 (34%), Positives = 64/97 (65%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 ++ + + I ++ + +A++AE++R+GL ++P GQ EAA +LGL + + +LV+LPQ Sbjct: 110 ADALTDKLLRAQIGITLFVSAYLAEVIRAGLQSIPAGQTEAAYSLGLGYWRTVQLVVLPQ 169 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355 A+R +IP + + + +L N+SL +G +DL++ T Sbjct: 170 ALRIVIPAVVNLSIGILLNTSLLTVIGISDLLNGAKT 206 >gi|46199112|ref|YP_004779.1| amino acid ABC transporter, permease protein [Thermus thermophilus HB27] gi|55981139|ref|YP_144436.1| amino acid ABC transporter permease [Thermus thermophilus HB8] gi|46196736|gb|AAS81152.1| amino acid ABC transporter, permease protein [Thermus thermophilus HB27] gi|55772552|dbj|BAD70993.1| amino acid ABC transporter, permease protein [Thermus thermophilus HB8] Length = 261 Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 62/187 (33%), Positives = 97/187 (51%), Gaps = 10/187 (5%) Query: 184 DTNAKIFVFSFVLGIVLSLFA--TRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALK 241 + K+ + S G+V+ +FA RLS + A YI ++I G P LV I Sbjct: 54 EVTLKLTLLSGAAGLVIGVFAGMARLSARAWVRLPAAF---YI--WVIRGTPLLVQILFA 108 Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301 Y + G + + +IAL+ A+ AE+VR+G+ A+P+GQ EAA Sbjct: 109 YNALPLLLQP---LWPGAQQALTPYWAAFIALAFNVGAYNAEVVRAGIQAIPKGQWEAAW 165 Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361 +LG + R V+LPQA+R ++PPL + + LLK+SSLA + +L G II+ T Sbjct: 166 SLGFSAADTMRFVILPQALRIVVPPLVNNVVALLKDSSLASVITLLELALSGQRIISATF 225 Query: 362 QAIEIIL 368 + +E+ L Sbjct: 226 RPVEVYL 232 >gi|282890142|ref|ZP_06298673.1| hypothetical protein pah_c013o049 [Parachlamydia acanthamoebae str. Hall's coccus] gi|281499993|gb|EFB42281.1| hypothetical protein pah_c013o049 [Parachlamydia acanthamoebae str. Hall's coccus] Length = 250 Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 37/121 (30%), Positives = 71/121 (58%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 ++LS ++ A+IAE++R+G+ ++ Q+E+A A+ LT + R ++ PQA+ +PPL Q Sbjct: 125 LSLSLFSGAYIAEMIRAGIESISSTQLESARAICLTPFQTYRFIIFPQAVSQTLPPLAGQ 184 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 + +++K+SSL +G +L + I + T +E YL L++ I+L +L Sbjct: 185 FASIIKDSSLLSIIGINELTNTAQQINSATYSTLESFFPLALGYLVLTLPISLLSKKLEE 244 Query: 391 K 391 + Sbjct: 245 R 245 >gi|239821011|ref|YP_002948196.1| polar amino acid ABC transporter, inner membrane subunit [Variovorax paradoxus S110] gi|239805864|gb|ACS22930.1| polar amino acid ABC transporter, inner membrane subunit [Variovorax paradoxus S110] Length = 252 Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 44/133 (33%), Positives = 76/133 (57%), Gaps = 10/133 (7%) Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286 +++ G+P L++I Y F P+L G VS F ++ L Y A+++E+VR Sbjct: 69 YVVRGVPLLMVILWVY---FLVPILI------GRDVS-GFTTMLCTLVIYEGAYLSEVVR 118 Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346 +G+ A+P+GQ EAA ALG +H V+LPQA+ +++P + SQ+++ +K ++L + Sbjct: 119 AGIQALPKGQAEAARALGHSHLGTMWFVILPQALYNMLPSMLSQFISTIKETTLGYVINV 178 Query: 347 ADLVSVGGTIINQ 359 +L I NQ Sbjct: 179 QELTFAANQINNQ 191 Score = 36.2 bits (82), Expect = 9.4, Method: Compositional matrix adjust. Identities = 23/66 (34%), Positives = 35/66 (53%) Query: 84 SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143 Y + L G V T L+ G++ A + L+ RLS +L+ W V V V R +P L+ Sbjct: 19 QYPSGPLGGIVATLILSVLGIVLAFPLSVLLALARLSPWRLLRWPATVLVYVVRGVPLLM 78 Query: 144 VIFFLY 149 VI ++Y Sbjct: 79 VILWVY 84 >gi|330821002|ref|YP_004349864.1| polar amino acid ABC transporter inner membrane protein [Burkholderia gladioli BSR3] gi|327372997|gb|AEA64352.1| polar amino acid ABC transporter inner membrane protein [Burkholderia gladioli BSR3] Length = 601 Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 50/142 (35%), Positives = 75/142 (52%), Gaps = 11/142 (7%) Query: 236 VLIALKYQLH--FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293 V IA+ + H D P G V+P FM+ I L+ AAF AE +R GL++V Sbjct: 147 VHIAVPFTGHVLLDAPTTG--------LVTP-FMAAAIGLTLSQAAFSAEAIRGGLLSVD 197 Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353 GQ EAA ALGL + R ++LPQAMRSI+P + + L K++S+ + DL Sbjct: 198 HGQREAAAALGLPRGRQIRRIILPQAMRSILPAAFNDLVGLAKSTSVVYILAMPDLFYTV 257 Query: 354 GTIINQTGQAIEIILIWMFIYL 375 I ++ + I ++++ YL Sbjct: 258 QIIYHRNLEVIPLLMVATVWYL 279 >gi|325062522|gb|ADY66212.1| ABC transporter, membrane spanning protein [Agrobacterium sp. H13-3] Length = 219 Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 38/115 (33%), Positives = 65/115 (56%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P +++ +AL +TAAF+AEI R + A+ +GQ EA+ +L + + R V+LPQA++ Sbjct: 84 PAWLAAGVALILWTAAFLAEIWRGCVEAIAKGQWEASASLAMGRLQQMRYVILPQALKIA 143 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378 IPP + ++K ++L +GF +L G + N T Q + + IY +L Sbjct: 144 IPPTVGFSVQVVKGTALTSIIGFVELSKAGTIVTNATFQPFTVYGLVALIYFALC 198 >gi|209546927|ref|YP_002278845.1| polar amino acid ABC transporter inner membrane protein [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209538171|gb|ACI58105.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 225 Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 49/140 (35%), Positives = 79/140 (56%), Gaps = 8/140 (5%) Query: 215 TGKALPLLYISTF--LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIA 272 + K LP I+++ L G P L+++ + P L Q + SP F++ ++A Sbjct: 47 SKKKLPRWSIASYIWLFRGAPALLILLFIWN---GLPQLSQV--FRAAWFSP-FVAAFLA 100 Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 L+ A++ EI+RS AV RGQ E A ALG + LV LPQAMR +P L ++++ Sbjct: 101 LTLIEVAYLTEILRSAFAAVGRGQREGAEALGFHRWQIFFLVTLPQAMRIAVPALVNEFI 160 Query: 333 NLLKNSSLAVAVGFADLVSV 352 +LLK++SLA + +L++V Sbjct: 161 SLLKSTSLATVISLKELMTV 180 >gi|83035006|gb|ABB97482.1| GlnB [Halobacillus dabanensis] Length = 218 Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 34/110 (30%), Positives = 66/110 (60%) Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342 EIVR + ++ +GQ EA ++GLT + R ++ PQA R +IPPL +Q++ LK++SL Sbjct: 107 EIVRGAVYSIDKGQEEAGRSIGLTRNQTMRYIIWPQAFRRMIPPLGNQFVISLKDTSLFS 166 Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 + +L+ +G T QA + + + +YL +++ A+++ R+ ++ Sbjct: 167 VIAVGELLYMGQQYYGMTFQAFQALTMVCVMYLIITVPTAIYLRRVERRL 216 Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust. Identities = 26/61 (42%), Positives = 34/61 (55%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G V T + F G+I ++G + G RLS NKL+ I VYVE R P L I F+ Sbjct: 16 LLEGLVWTLLITFVGLIIGFVLGAIFGFARLSKNKLIYGIATVYVEAVRGTPILAQILFI 75 Query: 149 Y 149 Y Sbjct: 76 Y 76 >gi|323165238|gb|EFZ51028.1| general L-amino acid transport system permease aapM domain protein [Shigella sonnei 53G] Length = 168 Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 34/76 (44%), Positives = 53/76 (69%) Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335 + +A++AE+VR GL A+P+GQ EAA +L L + K LV+LPQA++ +IP L + + L Sbjct: 42 FQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQGLVILPQALKLVIPGLVNTIIALF 101 Query: 336 KNSSLAVAVGFADLVS 351 K++SL + +G DL S Sbjct: 102 KDTSLVIIIGLFDLFS 117 >gi|310768127|gb|ADP13077.1| putative ABC transport system, inner membrane component [Erwinia sp. Ejp617] Length = 299 Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 40/129 (31%), Positives = 74/129 (57%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 +F + I L+ AA+ AEIVR G+ V GQ EAA ALGL + T ++LPQA+R+II Sbjct: 146 QFSTAVIGLTLVQAAYTAEIVRGGIAGVDHGQFEAAAALGLPSSRRTLRIILPQALRAII 205 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 P ++ ++L K +++ + +L + N+T Q I ++++ YL ++ ++++ Sbjct: 206 PGAFNEIISLAKGTAMVYVLAMPELFYTIQMVYNRTQQVIPLLMVAAVWYLLITTLLSVV 265 Query: 385 MNRLNAKIA 393 + + +A Sbjct: 266 QHYVERWLA 274 >gi|163735166|ref|ZP_02142602.1| ABC transporter permease protein [Roseobacter litoralis Och 149] gi|161391624|gb|EDQ15957.1| ABC transporter permease protein [Roseobacter litoralis Och 149] Length = 221 Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 50/163 (30%), Positives = 86/163 (52%), Gaps = 13/163 (7%) Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247 +IFV V G+ L L A L+R+ + + +I F P LV I + +F Sbjct: 26 RIFVICLVAGLSLGL-AMGLARYSVRRWLRWPAACFIEFFR--NTPVLVQI---FWFYFA 79 Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307 P+L F M+ + ++ +AAF AEI R G+ + GQ EA A+G+ + Sbjct: 80 FPILAPFEI-------SALMAAALGITLNSAAFSAEIFRGGIQTIDPGQWEAGRAIGMRY 132 Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 R+ ++LPQA+R ++P LT++ + + K ++LA A+ +AD++ Sbjct: 133 REIMARIILPQAVRRMMPALTNRGIEIFKMTTLASAIAYADVL 175 Score = 42.0 bits (97), Expect = 0.16, Method: Compositional matrix adjust. Identities = 24/75 (32%), Positives = 36/75 (48%), Gaps = 4/75 (5%) Query: 79 YTSD----SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVE 134 YT D Y A+ VG +NT + ++ +G +G R S + + W ++E Sbjct: 3 YTWDFGSVWEYREALWVGLINTLRIFVICLVAGLSLGLAMGLARYSVRRWLRWPAACFIE 62 Query: 135 VFRNIPPLVVIFFLY 149 FRN P LV IF+ Y Sbjct: 63 FFRNTPVLVQIFWFY 77 >gi|313623357|gb|EFR93582.1| probable amino-acid ABC transporter permease protein YckA [Listeria innocua FSL J1-023] Length = 213 Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 34/102 (33%), Positives = 64/102 (62%) Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327 +++IA AA+ AEI R G +++ GQ E+A LGLT+ + R ++LPQ ++ ++P + Sbjct: 86 AVFIAFILNYAAYFAEIFRGGFLSIENGQYESAKVLGLTYGQTLRKIVLPQVVKRVLPAI 145 Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369 ++ +NL+K+SSL +G DL+ G +++ I ++L+ Sbjct: 146 GNEVINLVKDSSLVYILGIGDLLRAGKIAMSRDVTLIPLVLV 187 >gi|172057718|ref|YP_001814178.1| polar amino acid ABC transporter, inner membrane subunit [Exiguobacterium sibiricum 255-15] gi|171990239|gb|ACB61161.1| polar amino acid ABC transporter, inner membrane subunit [Exiguobacterium sibiricum 255-15] Length = 214 Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 38/106 (35%), Positives = 63/106 (59%), Gaps = 3/106 (2%) Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 A+ AEI+R+G+ ++ +GQ EAA +LG+T R+ ++LPQA R ++P +T+Q + LK+ Sbjct: 97 GAYFAEIIRAGIQSIDKGQTEAARSLGMTGRQTMTQIVLPQAFRRMLPTITNQSIISLKD 156 Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 +SL +G ADL G Q E ++W + L ++I L Sbjct: 157 TSLLSIIGIADLTQQGQV---QQATTFEPFIVWTVVGLMYFVVIYL 199 >gi|126654465|ref|ZP_01726197.1| amino acid ABC transporter, permease protein [Bacillus sp. B14905] gi|126589071|gb|EAZ83288.1| amino acid ABC transporter, permease protein [Bacillus sp. B14905] Length = 218 Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 52/179 (29%), Positives = 89/179 (49%), Gaps = 20/179 (11%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 + PLL + FGLP L PV+G++ V F++ + Sbjct: 60 RGTPLLLQLLLICFGLPML-------------PVIGEY------LVLDRFVAACLGFILN 100 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 AA+ AEI R GL+A+ +GQ EAA LGL+ + T V+LPQ R +P L+++ + L+K Sbjct: 101 YAAYFAEIFRGGLLAIDKGQYEAAQVLGLSKWQTTTRVILPQMFRVALPALSNESVTLIK 160 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395 +++L AV +L+ T +N+ + I IYL +++++ +F L + + Sbjct: 161 DTALLYAVAVPELLHFAQTAVNRDFTIVP-FFIAGAIYLIMTLILTVFFKWLEKRFKFE 218 >gi|111023726|ref|YP_706698.1| glutamate transport system permease protein GluC [Rhodococcus jostii RHA1] gi|110823256|gb|ABG98540.1| glutamate transport system permease protein GluC [Rhodococcus jostii RHA1] Length = 226 Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 36/78 (46%), Positives = 52/78 (66%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + LS YTAAF+ E +RSG+ V GQ EA +LGLT + RL++LPQA R++ PL S Sbjct: 101 LGLSVYTAAFVCESLRSGINTVHVGQAEAGRSLGLTFSQNLRLIVLPQAFRAVTAPLGSV 160 Query: 331 YLNLLKNSSLAVAVGFAD 348 + L KN+++A +G A+ Sbjct: 161 LIALTKNTTIASVIGVAE 178 >gi|330970135|gb|EGH70201.1| glutamine ABC transporter, permease protein [Pseudomonas syringae pv. aceris str. M302273PT] Length = 246 Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 42/133 (31%), Positives = 74/133 (55%), Gaps = 10/133 (7%) Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286 +++ G+P L++I Y F P+L N G F ++ L Y +A++ EI+R Sbjct: 69 YVMRGIPLLMVIFWTY---FLVPLLIGHNITG-------FTTMLCTLVVYQSAYLCEIIR 118 Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346 + A+P GQ EA+ ALG+ + + T V+LPQA+ + +P L SQ+++++K +SL + Sbjct: 119 GAIQALPTGQYEASRALGMGYLRTTVWVILPQALYNALPSLISQFISIIKETSLGYVINV 178 Query: 347 ADLVSVGGTIINQ 359 ++ I NQ Sbjct: 179 QEVTFAANQINNQ 191 >gi|296533473|ref|ZP_06896052.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Roseomonas cervicalis ATCC 49957] gi|296266199|gb|EFH12245.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Roseomonas cervicalis ATCC 49957] Length = 226 Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 46/120 (38%), Positives = 71/120 (59%), Gaps = 11/120 (9%) Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291 LP LV+I L L F P +G +G S F + +++L+ AF EI +G+ A Sbjct: 74 LPPLVIIVL---LFFGLPAMG----LGLS----GFAATWLSLTLVLMAFSEEIYWAGITA 122 Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 VP+GQ EAA + GL+ RLV+LPQA+R IPPLT++ + + K ++L VG ++++ Sbjct: 123 VPKGQWEAARSTGLSFLATLRLVVLPQALRITIPPLTNRTIAITKGTALGSVVGVSEILG 182 >gi|190894163|ref|YP_001984457.1| nopaline ABC transporter, permease protein [Rhizobium etli CIAT 652] gi|190699824|gb|ACE93907.1| nopaline ABC transporter, permease protein [Rhizobium etli CIAT 652] Length = 249 Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 49/156 (31%), Positives = 84/156 (53%), Gaps = 2/156 (1%) Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285 T+ G P LV + L Y P++ Q +F+ P F +IA + +AA E++ Sbjct: 57 TYAFRGTPLLVQLFLIYYGIGQLPLVRQ-SFLWAVMREP-FWCAFIAFTLNSAAHTTEVL 114 Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345 R G+ AVPRGQ+EAA ALGL+ RL++ P +R +P ++ + +LK SSLA + Sbjct: 115 RGGIQAVPRGQIEAAKALGLSRFHTARLIVFPLTLRIALPAYANEVVGMLKASSLASTIT 174 Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 ++ + ++++T E+ + YL L+++I Sbjct: 175 LLEVTGLARQLVSETFAPYEVFIAAGAFYLLLTLLI 210 >gi|317403436|gb|EFV83948.1| hypothetical protein HMPREF0005_01969 [Achromobacter xylosoxidans C54] Length = 217 Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 59/206 (28%), Positives = 104/206 (50%), Gaps = 18/206 (8%) Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249 V S +LG+V +L +++ + + LL G+P +VL+ + ++F P Sbjct: 30 LVLSTLLGLVWALMRVSGNKYLSRFSAGVINLLR-------GIPIIVLL---FYIYFVMP 79 Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309 +G I + V + L IA S Y A E R+G+ A+ RGQ+EAA+A+G++ Sbjct: 80 DMG----IALTAVQAAIIGLGIAYSAYQA----ENFRAGIEAIDRGQIEAAMAMGMSWSM 131 Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369 R V+LPQA++ ++PP + + +LK+SS A + A+L G I T + + + Sbjct: 132 TMRRVVLPQAVKIVLPPYGNIMIMMLKDSSQASTITVAELALQGKLIAVSTFKNATVFSL 191 Query: 370 WMFIYLSLSIMIALFMNRLNAKIALK 395 +YL + + + L + L + A K Sbjct: 192 VALMYLVMCVPLILLVRHLEKRSAAK 217 >gi|313890158|ref|ZP_07823793.1| putative arginine ABC transporter, permease protein ArtQ [Streptococcus pseudoporcinus SPIN 20026] gi|313121519|gb|EFR44623.1| putative arginine ABC transporter, permease protein ArtQ [Streptococcus pseudoporcinus SPIN 20026] Length = 213 Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 34/91 (37%), Positives = 55/91 (60%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +A + AA+ AEI R G+ A+P+GQ EAA L L H + R ++LPQ + ++P + ++ Sbjct: 89 LAFTMNYAAYFAEIFRGGIEAIPKGQYEAAKVLRLNHLQTIRYIILPQVFKIVLPSVFNE 148 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361 +NL+K+SSL +G DL+ T N+ Sbjct: 149 VINLVKDSSLVYVLGVGDLLLASKTAANRDA 179 >gi|311032512|ref|ZP_07710602.1| amino acid ABC transporter (permease) [Bacillus sp. m3-13] Length = 233 Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 40/114 (35%), Positives = 70/114 (61%), Gaps = 7/114 (6%) Query: 249 PVLGQFNFIG------GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302 P+L Q FI G T+ F + IA S A+ +EI+R+ +++ P+GQ EAA + Sbjct: 79 PLLVQLFFIFYGLPSIGVTID-SFPAAVIAFSLNVGAYASEIIRAAILSTPKGQWEAAYS 137 Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356 +G+++ +A R ++LPQA R IPPL++ +++L+K++SLA + ++ V I Sbjct: 138 MGMSYPQALRRIILPQAARVSIPPLSNSFISLVKDTSLASLILVTEMFRVAQQI 191 >gi|16800918|ref|NP_471186.1| hypothetical protein lin1851 [Listeria innocua Clip11262] gi|16414353|emb|CAC97082.1| lin1851 [Listeria innocua Clip11262] Length = 213 Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 34/102 (33%), Positives = 64/102 (62%) Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327 +++IA AA+ AEI R G +++ GQ E+A LGLT+ + R ++LPQ ++ ++P + Sbjct: 86 AVFIAFILNYAAYFAEIFRGGFLSIENGQYESAKVLGLTYGQTLRKIVLPQVVKRVLPAI 145 Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369 ++ +NL+K+SSL +G DL+ G +++ I ++L+ Sbjct: 146 GNEVINLVKDSSLVYILGIGDLLRAGKIAMSRDVTLIPLVLV 187 >gi|84385570|ref|ZP_00988601.1| arginine ABC transporter, permease protein [Vibrio splendidus 12B01] gi|84379550|gb|EAP96402.1| arginine ABC transporter, permease protein [Vibrio splendidus 12B01] Length = 228 Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 44/134 (32%), Positives = 78/134 (58%), Gaps = 1/134 (0%) Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321 VSP F+S +ALS A++ ++ +R L AV +GQ EAA ALG++ ++ ++LPQA+R Sbjct: 87 VSP-FLSGVVALSLIFASYASQTIRGALKAVSKGQREAASALGISQLRSFFRIVLPQAVR 145 Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 +P LT+Q+L LLK+++L +G DL+ T +A IYL ++++ Sbjct: 146 HALPGLTNQWLVLLKDTALVSLIGVTDLLKQAQLTSAATHEAFTWYATAAAIYLVITLIT 205 Query: 382 ALFMNRLNAKIALK 395 + ++ K +++ Sbjct: 206 QRLVKVIDGKFSIQ 219 >gi|261379484|ref|ZP_05984057.1| amino acid ABC transporter, permease protein [Neisseria subflava NJ9703] gi|319638914|ref|ZP_07993672.1| ABC transporter [Neisseria mucosa C102] gi|284797944|gb|EFC53291.1| amino acid ABC transporter, permease protein [Neisseria subflava NJ9703] gi|317399818|gb|EFV80481.1| ABC transporter [Neisseria mucosa C102] Length = 219 Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 57/183 (31%), Positives = 96/183 (52%), Gaps = 20/183 (10%) Query: 228 LIFGLPTLVLIALKY-----------QLHFDKPVLGQ--FNFIGGSTVSPE---FMSLYI 271 L+FGLP V+ A + +L + P+L Q F + G + + F I Sbjct: 32 LLFGLPVAVVTAYRIRPFYALARAYIELSRNTPLLIQLFFLYYGLPKMGIKWDGFTCGVI 91 Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 AL A+++AE +R+G++AVP+GQ+EA A+GL+ + R V LPQA +P + + Sbjct: 92 ALVFLGASYMAEAIRAGILAVPKGQIEAGKAIGLSRFQVFRYVELPQAWAVAVPAIGANV 151 Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI----WMFIYLSLSIMIALFMNR 387 L L+K +S+ AVG A+L+ V II + E + + ++ I L +S++ NR Sbjct: 152 LFLMKETSIVSAVGIAELLFVTKDIIGMDYKTNEALFLLFASYLIILLPVSLLARWAENR 211 Query: 388 LNA 390 + + Sbjct: 212 VRS 214 >gi|46202162|ref|ZP_00208411.1| COG0765: ABC-type amino acid transport system, permease component [Magnetospirillum magnetotacticum MS-1] Length = 219 Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 42/121 (34%), Positives = 68/121 (56%) Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327 S I + + AAF AEI+R+G+ +VP+GQ AA ALGL + V+LPQA R++ P L Sbjct: 93 SALITFTVFEAAFYAEIMRAGINSVPKGQTWAAQALGLNRVQTMTSVVLPQAFRAMTPLL 152 Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387 +Q + L ++SSL A+G DL+ + +E+ L +Y ++ ++ + R Sbjct: 153 LTQTIVLFQDSSLVYAIGAKDLLKAAEIAGKNYNRPVEMYLFAAGLYFAICFSLSQVVKR 212 Query: 388 L 388 L Sbjct: 213 L 213 >gi|330988844|gb|EGH86947.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. lachrymans str. M301315] gi|331008159|gb|EGH88216.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 324 Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 68/212 (32%), Positives = 103/212 (48%), Gaps = 18/212 (8%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF--DK 248 VFS +LG L+L RLS AL YI F +P L+++ + Y + D Sbjct: 96 VFSIILGTALAL--ARLS---GSPLLAALAWGYIWFFR--SMPALLVLIILYNFAYLYDH 148 Query: 249 PVLG----QFNFIGGSTVS--PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302 +LG F STV +F + LS AA+ AEI+R GLI V GQ EAA A Sbjct: 149 ILLGVPFTDLVFAEWSTVDVLSQFTVAVLGLSLMQAAYTAEIIRGGLIGVDAGQHEAAAA 208 Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362 LGL + ++LPQA+RSI+P ++ + L+K +S+ + +L I N+T Sbjct: 209 LGLPASRRVFRIILPQALRSILPSGFNEIIGLVKGTSIVYVLALPELFYTVQVIYNRTQA 268 Query: 363 AIEIIL---IWMFIYLSLSIMIALFMNRLNAK 391 I +++ +W I +L ++ R A+ Sbjct: 269 VIPLLIVATVWYLIITTLLTSAQYYVERHFAR 300 >gi|327194766|gb|EGE61608.1| nopaline ABC transporter, permease protein [Rhizobium etli CNPAF512] Length = 247 Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 49/156 (31%), Positives = 84/156 (53%), Gaps = 2/156 (1%) Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285 T+ G P LV + L Y P++ Q +F+ P F +IA + +AA E++ Sbjct: 55 TYAFRGTPLLVQLFLIYYGIGQLPLVRQ-SFLWAVMREP-FWCAFIAFTLNSAAHTTEVL 112 Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345 R G+ AVPRGQ+EAA ALGL+ RL++ P +R +P ++ + +LK SSLA + Sbjct: 113 RGGIQAVPRGQIEAAKALGLSRFHTARLIVFPLTLRIALPAYANEVVGMLKASSLASTIT 172 Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 ++ + ++++T E+ + YL L+++I Sbjct: 173 LLEVTGLARQLVSETFAPYEVFIAAGAFYLLLTLLI 208 >gi|268590212|ref|ZP_06124433.1| arginine ABC transporter, permease protein ArtQ [Providencia rettgeri DSM 1131] gi|291314493|gb|EFE54946.1| arginine ABC transporter, permease protein ArtQ [Providencia rettgeri DSM 1131] Length = 246 Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 57/197 (28%), Positives = 97/197 (49%), Gaps = 25/197 (12%) Query: 217 KALPLLYISTFLIFGLPTLVLIAL------------KYQLHFDKPVL----GQFNFIGGS 260 + LP L + F+ FG TL LI L + + D + G+F++ Sbjct: 55 RGLPELLVVLFVYFG--TLQLINLFGDGFDINLGFWQTTIQIDPSIFFANSGEFDY---- 108 Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320 +P F+ IAL+ A++ ++ +R L AVP GQ EA ALGL R ++PQ Sbjct: 109 --TP-FVCGVIALALLYASYASQTLRGALKAVPYGQWEAGFALGLNKRTIFFRFIMPQMW 165 Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380 R +P L +Q+L LLK+++L + DL+ TI+N+T + I IYL+++++ Sbjct: 166 RHALPGLGNQWLVLLKDTALVSLISVNDLMLQTKTIVNRTHEPFTWYAIVGLIYLAITLV 225 Query: 381 IALFMNRLNAKIALKEK 397 + + R+ + E+ Sbjct: 226 SQVILKRIELRTTRFER 242 >gi|116496232|ref|YP_807966.1| ABC-type amino acid transport system, permease and periplasmic component [Lactobacillus casei ATCC 334] gi|116106382|gb|ABJ71524.1| amino acid ABC transporter membrane protein, PAAT family / amino acid ABC transporter substrate-binding protein, PAAT family [Lactobacillus casei ATCC 334] Length = 482 Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 61/204 (29%), Positives = 106/204 (51%), Gaps = 26/204 (12%) Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251 F V+G +L+L +LS H KA+ +YI I G P LV + + F +L Sbjct: 299 FGTVIGTLLALM--KLS---HSWFAKAIANVYIE--FIRGTPLLVQ---AFIVFFGTQIL 348 Query: 252 GQ--FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309 G F+ G+ IA++ + A++AEI+R G+ +VP GQ EAA +LGL + Sbjct: 349 GLDLSAFVAGA----------IAMAINSGAYVAEIIRGGINSVPIGQTEAARSLGLHQGQ 398 Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA----IE 365 A R V+LPQA ++I P L ++++ +K SS+ +G +L+ G + + + + Sbjct: 399 AMRYVILPQATKNIWPALGNEFVTDIKESSVLSVIGATELMFEGTVVQGASFKPFLPLVV 458 Query: 366 IILIWMFIYLSLSIMIALFMNRLN 389 + +++ + +LS ++ L R N Sbjct: 459 VAILYFIMTFTLSRLLRLIEKRFN 482 >gi|91225768|ref|ZP_01260797.1| arginine ABC transporter, permease protein [Vibrio alginolyticus 12G01] gi|91189657|gb|EAS75932.1| arginine ABC transporter, permease protein [Vibrio alginolyticus 12G01] Length = 229 Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 50/137 (36%), Positives = 75/137 (54%), Gaps = 8/137 (5%) Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321 VSP F+S +ALS A++ ++ +R L AV RGQ EAA ALG++ A ++LPQA+R Sbjct: 87 VSP-FLSGVVALSLIFASYASQTLRGALKAVGRGQREAASALGISQAHAFVRIVLPQAVR 145 Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 +P LT+Q+L LLK+++L +G DL+ T AI W ++ + I Sbjct: 146 HALPGLTNQWLVLLKDTALVSLIGVTDLLKQA----QLTSAAIHEAFTWYATAAAIYLGI 201 Query: 382 ALFMNRLNAKIALKEKK 398 L R + L +KK Sbjct: 202 TLITQR---AVKLIDKK 215 >gi|304396808|ref|ZP_07378688.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea sp. aB] gi|304355604|gb|EFM19971.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea sp. aB] Length = 222 Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 61/211 (28%), Positives = 107/211 (50%), Gaps = 18/211 (8%) Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALK 241 T+ A + S + GI++++ R + HF K LL + + L LP LV+I Sbjct: 21 TLQLCAVAALCSLLWGIIMAIGMLR-APHFWRK------LLRLYSALTQALPLLVVI--- 70 Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301 Y L+F VL +N + SP+ + +AL+ Y A ++A+++RS + +PRGQ EA Sbjct: 71 YLLYF---VLPDYNI---TLSSPQ--AGVLALTLYYAPYVAQVIRSAIETLPRGQWEACR 122 Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361 LGL+ + R V LPQ + ++ PL + L+K+S+L V + + I++T Sbjct: 123 VLGLSRMEQLRDVALPQTLPQMLSPLVGLLIGLIKDSALLSIVSVQEFMYAAKEAISETY 182 Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 +EI L Y +L+ ++ R+ ++ Sbjct: 183 APLEIYLTVALSYWALNSLLDGLTRRIEFRM 213 >gi|302023472|ref|ZP_07248683.1| ABC-type amino acid transport system, permease component [Streptococcus suis 05HAS68] Length = 165 Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 31/79 (39%), Positives = 58/79 (73%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I +S + A+++E R+G+ AVP+GQ+EAA +LG+ ++A R V++PQA+ +I+P L ++ Sbjct: 36 IVISMNSGAYVSETDRAGINAVPKGQLEAANSLGIRPKQAMRYVIMPQAITNILPALGNE 95 Query: 331 YLNLLKNSSLAVAVGFADL 349 ++ ++K+SSL +G +L Sbjct: 96 FVTIVKDSSLLSTIGVMEL 114 >gi|13473259|ref|NP_104826.1| glutamine ABC transporter (integral membrane protein) [Mesorhizobium loti MAFF303099] gi|14024007|dbj|BAB50612.1| glutamine ABC transporter (integral membrane protein) [Mesorhizobium loti MAFF303099] Length = 221 Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 61/204 (29%), Positives = 107/204 (52%), Gaps = 32/204 (15%) Query: 195 VLGIVLSLF---ATRLSRHF---HEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248 V+G+VL+++ A R+ R + + + +PL+ + + +G+PT+V L + Sbjct: 37 VIGLVLAVWYVSAGRVVRAIIAAYVEFIRNVPLILLVYLVFYGVPTVV------DLAYSA 90 Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308 P S + LS Y+ A++ E+ RSGL AVPRGQ++A A+GLT Sbjct: 91 PT-----------------SFVLTLSVYSGAYLVEVFRSGLEAVPRGQLDAGKAIGLTPW 133 Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN-QTGQAIEII 367 + V LP +R +P L++ +++L K++S+A + +L + G IN T + +E+ Sbjct: 134 QRLIHVRLPTMLRITLPALSNTFISLFKDTSIASVISVPEL-TFGAQWINFNTFRIVEVY 192 Query: 368 LIWMFIYLSLSIMIALFMNRLNAK 391 L+ +YL L+ I LF RL + Sbjct: 193 LVTTAMYL-LTGYILLFGLRLVER 215 >gi|15596087|ref|NP_249581.1| arginine/ornithine transport protein AotM [Pseudomonas aeruginosa PAO1] gi|107100348|ref|ZP_01364266.1| hypothetical protein PaerPA_01001373 [Pseudomonas aeruginosa PACS2] gi|116048814|ref|YP_792386.1| arginine/ornithine transport protein AotM [Pseudomonas aeruginosa UCBPP-PA14] gi|218893141|ref|YP_002442010.1| arginine/ornithine transport protein AotM [Pseudomonas aeruginosa LESB58] gi|254239243|ref|ZP_04932566.1| arginine/ornithine transport protein AotM [Pseudomonas aeruginosa C3719] gi|254245177|ref|ZP_04938499.1| arginine/ornithine transport protein AotM [Pseudomonas aeruginosa 2192] gi|296390756|ref|ZP_06880231.1| arginine/ornithine transport protein AotM [Pseudomonas aeruginosa PAb1] gi|313105773|ref|ZP_07792036.1| arginine/ornithine transport protein AotM [Pseudomonas aeruginosa 39016] gi|9946790|gb|AAG04279.1|AE004523_7 arginine/ornithine transport protein AotM [Pseudomonas aeruginosa PAO1] gi|2668597|gb|AAC71072.1| membrane protein [Pseudomonas aeruginosa PAO1] gi|115584035|gb|ABJ10050.1| arginine/ornithine transport protein AotM [Pseudomonas aeruginosa UCBPP-PA14] gi|126171174|gb|EAZ56685.1| arginine/ornithine transport protein AotM [Pseudomonas aeruginosa C3719] gi|126198555|gb|EAZ62618.1| arginine/ornithine transport protein AotM [Pseudomonas aeruginosa 2192] gi|218773369|emb|CAW29181.1| arginine/ornithine transport protein AotM [Pseudomonas aeruginosa LESB58] gi|310878538|gb|EFQ37132.1| arginine/ornithine transport protein AotM [Pseudomonas aeruginosa 39016] Length = 232 Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 51/167 (30%), Positives = 86/167 (51%), Gaps = 11/167 (6%) Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF----MSLYIALSCYTA 278 ++ T++I G P LV + L Y L QF+ + S + P +A + T+ Sbjct: 56 WLYTYVIRGTPMLVQLFLIYY------GLAQFDAVRESALWPWLSNASFCACLAFAINTS 109 Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338 A+ AEI+ L A P G++EAA A+G++ K R +LLP A+R +P +++ + +L+ + Sbjct: 110 AYTAEILAGSLKATPHGEIEAAKAMGMSRLKMYRRILLPSALRRALPQYSNEVIMMLQTT 169 Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS-IMIALF 384 SLA V D+ T+ +Q E + YL L+ I++ LF Sbjct: 170 SLASIVTLVDITGAARTVYSQYYLPFEAFITAGLFYLCLTFILVRLF 216 >gi|260583731|ref|ZP_05851479.1| polar amino acid uptake (PAAT) family ABC transporter permease [Granulicatella elegans ATCC 700633] gi|260158357|gb|EEW93425.1| polar amino acid uptake (PAAT) family ABC transporter permease [Granulicatella elegans ATCC 700633] Length = 216 Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 56/191 (29%), Positives = 88/191 (46%), Gaps = 34/191 (17%) Query: 190 FVFSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243 F+F +LG + L R+ +FH + P L L FGLP LK Q Sbjct: 29 FIFGTILGFMFVLMKRSNIRVLRMIANFHVSFMRGTPTLVFLFLLYFGLPY-----LKIQ 83 Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 L P + + S ++A+I E++RS + AV GQ EA+ +L Sbjct: 84 L-------------------PALVCAILCFSIASSAYICEVLRSSIDAVDYGQWEASTSL 124 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS----VGGTIINQ 359 GL + + R V++PQA R +PPL++ L+++K +SLA + D+ VGG + Sbjct: 125 GLNYFQTLRRVIVPQAFRISVPPLSNVLLDMIKGTSLAAMITVPDIFQNAKIVGGREFDY 184 Query: 360 TGQAIEIILIW 370 I + LI+ Sbjct: 185 MTMYILVALIY 195 >gi|300784267|ref|YP_003764558.1| amino acid ABC transporter permease [Amycolatopsis mediterranei U32] gi|299793781|gb|ADJ44156.1| permease component of ABC-type amino acid transport system [Amycolatopsis mediterranei U32] Length = 286 Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 49/155 (31%), Positives = 80/155 (51%), Gaps = 32/155 (20%) Query: 204 ATRLSRH--------FHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFN 255 A RLS H F + +A+P L + FGLPT+ Sbjct: 89 AGRLSDHAWVRGIAGFVVEFFRAIPALILMFVFYFGLPTV-------------------- 128 Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315 G SP F+ + L+ Y + +AE+ R+G+ ++P+GQ EAA ALG+ + LVL Sbjct: 129 ---GVPTSP-FLGVVFGLTLYNGSVLAEVFRAGIQSLPKGQSEAAYALGMRKTQVMFLVL 184 Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 LPQA+R+++P + SQ + LLK+++L + + +L+ Sbjct: 185 LPQAVRAMLPTIISQLVVLLKDTALGFIITYQELL 219 >gi|296158407|ref|ZP_06841238.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. Ch1-1] gi|295891351|gb|EFG71138.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. Ch1-1] Length = 265 Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 62/205 (30%), Positives = 102/205 (49%), Gaps = 22/205 (10%) Query: 195 VLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF---GLPTLVLIALKYQLHFDKPVL 251 V+G+VL L ALPL ++ I+ G P LV + L Y F P L Sbjct: 45 VIGVVLGLSGMH----------HALPLRVLNQGYIWFFRGTPVLVQLVLIY---FGLPYL 91 Query: 252 GQFNF------IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305 F+ +G +S ++ IA + AA+++EI R+ + ++ GQMEAA+A+G+ Sbjct: 92 VGFDLFPAVMSLGPLHLSGALVAGVIAFGLHEAAYMSEITRASVGSINPGQMEAALAVGM 151 Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365 T A R ++LPQA+ I+P L +Q+ N+LK ++L +G +++ V + T E Sbjct: 152 TPAMAMRRIVLPQAVPLIVPALGNQFNNMLKTTALLSVIGVSEMFRVAEQMQAATFMTFE 211 Query: 366 IILIWMFIYLSLSIMIALFMNRLNA 390 + L YL L+ + + L A Sbjct: 212 VYLGVSVYYLMLTGVWTFIQHGLEA 236 >gi|283833087|ref|ZP_06352828.1| amino acid ABC transporter, permease protein [Citrobacter youngae ATCC 29220] gi|291070707|gb|EFE08816.1| amino acid ABC transporter, permease protein [Citrobacter youngae ATCC 29220] Length = 308 Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 38/134 (28%), Positives = 77/134 (57%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 +F + + L+ +A+ AEI+R G + V GQ EAA ALGL + T ++LPQA+R+I+ Sbjct: 146 QFSTAVVGLTLVQSAYTAEIIRGGFLGVDHGQYEAAAALGLPAWRRTLRIILPQALRTIL 205 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 P ++ ++L K +++ + +L I N+T + I ++++ YL ++ +++L Sbjct: 206 PAGFNEIISLAKGTAMVYVLAMPELFYTIQMIYNRTQEVIPLLMVGAVWYLVITSVLSLI 265 Query: 385 MNRLNAKIALKEKK 398 + + +A E++ Sbjct: 266 QHIVERALARSERR 279 >gi|238928188|ref|ZP_04659948.1| amino-acid ABC superfamily ATP binding cassette transporter permease protein [Selenomonas flueggei ATCC 43531] gi|304437587|ref|ZP_07397542.1| amino-acid ABC superfamily ATP binding cassette transporter permease protein [Selenomonas sp. oral taxon 149 str. 67H29BP] gi|238884148|gb|EEQ47786.1| amino-acid ABC superfamily ATP binding cassette transporter permease protein [Selenomonas flueggei ATCC 43531] gi|304369400|gb|EFM23070.1| amino-acid ABC superfamily ATP binding cassette transporter permease protein [Selenomonas sp. oral taxon 149 str. 67H29BP] Length = 254 Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 47/124 (37%), Positives = 69/124 (55%), Gaps = 6/124 (4%) Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 A+I+E+ R+ AVPRGQ EAA++ GL+ +A V+L QA +P + +NLLK Sbjct: 111 GAYISEVFRAAYTAVPRGQYEAAVSAGLSPWQAFCHVMLGQAALIALPNFGNSTINLLKE 170 Query: 338 SSLAVAVGFADLVSVGGTIINQTGQA--IEIILIWMFIYLSLSIMI----ALFMNRLNAK 391 +SLA +G DL+ G II Q A +E+ L M IY L ++I A +RL+ Sbjct: 171 ASLAYTIGLIDLIGRGSLIIAQNYGAYGVEVYLSAMLIYWVLVLLIEQGFAWAEHRLDQG 230 Query: 392 IALK 395 L+ Sbjct: 231 TGLR 234 >gi|301067834|ref|YP_003789857.1| amino acid ABC transporter permease/periplasmic protein [Lactobacillus casei str. Zhang] gi|300440241|gb|ADK20007.1| ABC-type amino acid transport system, permease and periplasmic component [Lactobacillus casei str. Zhang] Length = 482 Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 61/204 (29%), Positives = 106/204 (51%), Gaps = 26/204 (12%) Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251 F V+G +L+L +LS H KA+ +YI I G P LV + + F +L Sbjct: 299 FGTVIGTLLALM--KLS---HSWFAKAIANVYIE--FIRGTPLLVQ---AFIVFFGTQIL 348 Query: 252 GQ--FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309 G F+ G+ IA++ + A++AEI+R G+ +VP GQ EAA +LGL + Sbjct: 349 GLDLSAFVAGA----------IAMAINSGAYVAEIIRGGINSVPIGQTEAARSLGLHQGQ 398 Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA----IE 365 A R V+LPQA ++I P L ++++ +K SS+ +G +L+ G + + + + Sbjct: 399 AMRYVILPQATKNIWPALGNEFVTDIKESSVLSVIGATELMFEGTVVQGASFKPFLPLVV 458 Query: 366 IILIWMFIYLSLSIMIALFMNRLN 389 + +++ + +LS ++ L R N Sbjct: 459 VAILYFIMTFTLSRLLRLIEKRFN 482 >gi|221069034|ref|ZP_03545139.1| polar amino acid ABC transporter, inner membrane subunit [Comamonas testosteroni KF-1] gi|264676835|ref|YP_003276741.1| glutamine-binding periplasmic protein [Comamonas testosteroni CNB-2] gi|299529655|ref|ZP_07043092.1| glutamine-binding periplasmic protein [Comamonas testosteroni S44] gi|220714057|gb|EED69425.1| polar amino acid ABC transporter, inner membrane subunit [Comamonas testosteroni KF-1] gi|262207347|gb|ACY31445.1| glutamine-binding periplasmic protein [Comamonas testosteroni CNB-2] gi|298722518|gb|EFI63438.1| glutamine-binding periplasmic protein [Comamonas testosteroni S44] Length = 217 Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 33/96 (34%), Positives = 60/96 (62%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P+F + +A + AA+ AEI R+G+ +V RGQ E A LG+T+ + R ++LPQ I Sbjct: 85 PDFPAAVVAFALNYAAYFAEIFRAGIKSVDRGQYEGAKVLGMTYAQTMRRIVLPQMWARI 144 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359 +PP++++ + L+K++SL + DL+ V ++ + Sbjct: 145 LPPVSNETITLVKDTSLIYVLALNDLLRVARGVVQR 180 >gi|239637861|ref|ZP_04678822.1| glutamine-binding periplasmic protein [Staphylococcus warneri L37603] gi|239596424|gb|EEQ78960.1| glutamine-binding periplasmic protein [Staphylococcus warneri L37603] Length = 486 Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 30/80 (37%), Positives = 59/80 (73%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IAL ++A+IAEI R+G+ ++ +GQ EAA +LGL++ + + V++PQA+++I+P L ++ Sbjct: 361 IALVINSSAYIAEIFRAGINSIDKGQTEAARSLGLSYNQTMKSVVMPQAIKNILPALGNE 420 Query: 331 YLNLLKNSSLAVAVGFADLV 350 ++ L+K SS+ +G +++ Sbjct: 421 FVTLIKESSIVSTIGVGEIM 440 Score = 45.1 bits (105), Expect = 0.019, Method: Compositional matrix adjust. Identities = 30/110 (27%), Positives = 51/110 (46%), Gaps = 6/110 (5%) Query: 40 IFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWL 99 I L +N N + NL I +A ++ YT Y + + G NT + Sbjct: 239 ILLKKLNQTSNEVNDKNL---IDHYMTKAANDMQDDGNFYTK---YKSFFIKGLQNTILI 292 Query: 100 AFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 +F G++ I+G + +LS K ++WI +Y+E R P LV +F ++ Sbjct: 293 SFVGVVFGAILGAFIALMKLSKFKPLSWIASIYIEFLRGTPLLVQVFIVF 342 >gi|239630683|ref|ZP_04673714.1| ABC-type amino acid transport system protein [Lactobacillus paracasei subsp. paracasei 8700:2] gi|239526966|gb|EEQ65967.1| ABC-type amino acid transport system protein [Lactobacillus paracasei subsp. paracasei 8700:2] Length = 485 Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 61/204 (29%), Positives = 106/204 (51%), Gaps = 26/204 (12%) Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251 F V+G +L+L +LS H KA+ +YI I G P LV + + F +L Sbjct: 302 FGTVIGTLLALM--KLS---HSWFAKAIANVYIE--FIRGTPLLVQ---AFIVFFGTQIL 351 Query: 252 GQ--FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309 G F+ G+ IA++ + A++AEI+R G+ +VP GQ EAA +LGL + Sbjct: 352 GLDLSAFVAGA----------IAMAINSGAYVAEIIRGGINSVPIGQTEAARSLGLHQGQ 401 Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA----IE 365 A R V+LPQA ++I P L ++++ +K SS+ +G +L+ G + + + + Sbjct: 402 AMRYVILPQATKNIWPALGNEFVTDIKESSVLSVIGATELMFEGTVVQGASFKPFLPLVV 461 Query: 366 IILIWMFIYLSLSIMIALFMNRLN 389 + +++ + +LS ++ L R N Sbjct: 462 VAILYFIMTFTLSRLLRLIEKRFN 485 >gi|227532776|ref|ZP_03962825.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|227189610|gb|EEI69677.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus paracasei subsp. paracasei ATCC 25302] Length = 482 Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 61/204 (29%), Positives = 106/204 (51%), Gaps = 26/204 (12%) Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251 F V+G +L+L +LS H KA+ +YI I G P LV + + F +L Sbjct: 299 FGTVIGTLLALM--KLS---HSWFAKAIANVYIE--FIRGTPLLVQ---AFIVFFGTQIL 348 Query: 252 GQ--FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309 G F+ G+ IA++ + A++AEI+R G+ +VP GQ EAA +LGL + Sbjct: 349 GLDLSAFVAGA----------IAMAINSGAYVAEIIRGGINSVPIGQTEAARSLGLHQGQ 398 Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA----IE 365 A R V+LPQA ++I P L ++++ +K SS+ +G +L+ G + + + + Sbjct: 399 AMRYVILPQATKNIWPALGNEFVTDIKESSVLSVIGATELMFEGTVVQGASFKPFLPLVV 458 Query: 366 IILIWMFIYLSLSIMIALFMNRLN 389 + +++ + +LS ++ L R N Sbjct: 459 VAILYFIMTFTLSRLLRLIEKRFN 482 >gi|169830102|ref|YP_001700260.1| amino-acid ABC transporter permease [Lysinibacillus sphaericus C3-41] gi|168994590|gb|ACA42130.1| Probable amino-acid ABC transporter permease protein [Lysinibacillus sphaericus C3-41] Length = 253 Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 40/106 (37%), Positives = 64/106 (60%), Gaps = 2/106 (1%) Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 AA ++E++RS +A+P+GQ EAA+++GLT +A R ++ PQA+ +P + + LL+ Sbjct: 127 AAIMSEVMRSAYLAIPKGQFEAAVSVGLTPIQAYRRIIFPQALVVALPNFGNGMIALLQE 186 Query: 338 SSLAVAVGFADLVSVGGTII--NQTGQAIEIILIWMFIYLSLSIMI 381 +LA +G D+V II N A+EI + IY LSI+I Sbjct: 187 GALAYTIGLIDIVGKANLIIASNINAHALEIYIALAIIYWVLSIII 232 >gi|309807768|ref|ZP_07701702.1| ABC transporter, permease protein [Lactobacillus iners LactinV 01V1-a] gi|308169028|gb|EFO71112.1| ABC transporter, permease protein [Lactobacillus iners LactinV 01V1-a] Length = 179 Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 41/123 (33%), Positives = 75/123 (60%), Gaps = 4/123 (3%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IA+ + A++AE +RSG+ ++P GQ EAA +LGL+ R V++PQA+++I P L ++ Sbjct: 54 IAIGLNSGAYVAEDIRSGINSLPVGQAEAARSLGLSKAATYRYVVIPQAIKNIWPALGNE 113 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY----LSLSIMIALFMN 386 ++ LLK+SSL +G A+ + + T Q + +++ M IY +L+ +++ Sbjct: 114 FITLLKDSSLVSIIGVAETMYQTQLVQTSTYQGVFPLVVAMAIYFIMTFTLTRILSYMER 173 Query: 387 RLN 389 R+N Sbjct: 174 RMN 176 >gi|296840926|ref|ZP_06863806.2| L-cystine ABC transporter, permease protein [Neisseria polysaccharea ATCC 43768] gi|296839593|gb|EFH23531.1| L-cystine ABC transporter, permease protein [Neisseria polysaccharea ATCC 43768] Length = 227 Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 35/121 (28%), Positives = 66/121 (54%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I S A+ +E + + +++VP+GQ EA ++G+T+ + R ++ PQA R +PPL+++ Sbjct: 100 IGFSLNVGAYASETICAAILSVPKGQWEAGFSIGMTYMQTFRRIVAPQAFRVAVPPLSNE 159 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++ L KN+SLA V +L V N+T + + + +Y ++ L RL Sbjct: 160 FIGLFKNTSLAAVVTVTELFRVAQETANRTYDFLPVYIEAALVYWCFCKVLFLIQARLEK 219 Query: 391 K 391 + Sbjct: 220 R 220 >gi|283477848|emb|CAY73764.1| putative ABC transport system, inner membrane component [Erwinia pyrifoliae DSM 12163] Length = 295 Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 40/129 (31%), Positives = 74/129 (57%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 +F + I L+ AA+ AEIVR G+ V GQ EAA ALGL + T ++LPQA+R+II Sbjct: 142 QFSTAVIGLTLVQAAYTAEIVRGGIAGVDHGQFEAAAALGLPSSRRTLRIILPQALRAII 201 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 P ++ ++L K +++ + +L + N+T Q I ++++ YL ++ ++++ Sbjct: 202 PGAFNEIISLAKGTAMVYVLAMPELFYTIQMVYNRTQQVIPLLMVAAVWYLLITTLLSVV 261 Query: 385 MNRLNAKIA 393 + + +A Sbjct: 262 QHYVERWLA 270 >gi|253690351|ref|YP_003019541.1| polar amino acid ABC transporter, inner membrane subunit [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251756929|gb|ACT15005.1| polar amino acid ABC transporter, inner membrane subunit [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 369 Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 31/95 (32%), Positives = 60/95 (63%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 + + + I ++ + A + AE++R GL +VPRGQ EAA+AL L + T ++LPQA+R + Sbjct: 228 KLLRIIIGIALFFACYQAEVIRGGLQSVPRGQYEAAMALNLGYWHTTTKIVLPQALRICL 287 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359 P +T+ + +KN+S + +G D+++ +++ Sbjct: 288 PAMTNHIIAAMKNTSFVIIIGLFDILTATSSVMQD 322 >gi|261417154|ref|YP_003250837.1| polar amino acid ABC transporter, inner membrane subunit [Fibrobacter succinogenes subsp. succinogenes S85] gi|261373610|gb|ACX76355.1| polar amino acid ABC transporter, inner membrane subunit [Fibrobacter succinogenes subsp. succinogenes S85] gi|302325679|gb|ADL24880.1| putative amino acid ABC transporter, permease/amino acid-binding protein [Fibrobacter succinogenes subsp. succinogenes S85] Length = 498 Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 39/122 (31%), Positives = 68/122 (55%), Gaps = 4/122 (3%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +A + A+++EI+RSG+ V GQ+EA +LGL R ++ PQA ++ +P LT++ Sbjct: 372 VAFGINSGAYVSEIIRSGIKGVDPGQIEAGRSLGLKFRTVLYYIVYPQAFKNSLPALTNE 431 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA----IEIILIWMFIYLSLSIMIALFMN 386 +++L+K +S+ +G DL G I + T +A + + I+ I LS +A Sbjct: 432 FISLIKETSICGYIGLTDLTRGGDIIRSMTYEAMLPLLAVAAIYFIIVAGLSACVAKLEK 491 Query: 387 RL 388 RL Sbjct: 492 RL 493 >gi|170692241|ref|ZP_02883404.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia graminis C4D1M] gi|170142671|gb|EDT10836.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia graminis C4D1M] Length = 219 Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 57/207 (27%), Positives = 104/207 (50%), Gaps = 18/207 (8%) Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251 F + G VL+L H +T L +Y+S ++ G P LV I + +++ P Sbjct: 31 FGLIAGAVLALMGVS-----HSRTLNRLARVYVS--VMRGTPLLVQI---FVIYYGLP-- 78 Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311 FN ++ P + IALS AA+++E +R ++ + +GQ AA +LGL+ R+ Sbjct: 79 -SFNI----SLDPTPAGV-IALSANVAAYLSESMRGAILGIHQGQWLAAYSLGLSRRQTL 132 Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371 R V+ PQA+R +P L++ ++L+K++SL + +L+ +I T Q + + L Sbjct: 133 RYVIAPQALRIAVPSLSNSLISLIKDTSLVSVITVTELLRSAQEVIASTYQPLPLYLAAA 192 Query: 372 FIYLSLSIMIALFMNRLNAKIALKEKK 398 +Y L ++ L ++AL + Sbjct: 193 AVYWVLCQILELLQRWYERRLALPSRH 219 >gi|327395463|dbj|BAK12885.1| inner membrane amino-acid ABC transporter permease protein YhdY [Pantoea ananatis AJ13355] Length = 366 Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 36/96 (37%), Positives = 59/96 (61%) Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315 F+ T + + + + + +A++AE+VR GL A+P+GQ EAA +L L + K LV+ Sbjct: 220 FMAEGTTIDKLVRALVGVILFQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQMLVI 279 Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 LPQA++ IP L + + L K++SL + +G DL S Sbjct: 280 LPQALKLTIPGLVNTIIALFKDTSLVIIIGLFDLFS 315 >gi|307725562|ref|YP_003908775.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia sp. CCGE1003] gi|307586087|gb|ADN59484.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. CCGE1003] Length = 265 Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 37/87 (42%), Positives = 60/87 (68%), Gaps = 4/87 (4%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +AL+ ++A+IAEI RSG+ +V RGQM A ALG+T+ R V++PQ +R I+P L +Q Sbjct: 103 VALALVSSAYIAEIFRSGIQSVGRGQMSACQALGMTYWSGMRHVIVPQGVRRILPALANQ 162 Query: 331 YLNLLKNSSLAVAVGF----ADLVSVG 353 +++++K+SSL +G DL ++G Sbjct: 163 FISIVKDSSLVYFLGLLTSQRDLFTIG 189 >gi|228477639|ref|ZP_04062268.1| ABC-type amino acid transport permease component [Streptococcus salivarius SK126] gi|228250528|gb|EEK09739.1| ABC-type amino acid transport permease component [Streptococcus salivarius SK126] Length = 230 Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 37/151 (24%), Positives = 84/151 (55%), Gaps = 17/151 (11%) Query: 264 PEFMSLYIALSCYT---------------AAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308 PEF++ ++ L +A I+E+ ++ A+P+GQ+EA +++GLT Sbjct: 80 PEFLNWWLGLDINDWSKLIFVLVTMVLLFSAMISEVFKAAYQAIPKGQLEAGLSIGLTSE 139 Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ--TGQAIEI 366 + ++ PQA + +P +T+ LNL+++++LA +GF D++ G +I++ ++E Sbjct: 140 QTFVRIIAPQAFKVALPNITTAILNLMRDAALAYTIGFIDVMGKGNLLISRHLGNYSLET 199 Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 F+Y ++++++L ++++KE+ Sbjct: 200 YTAVAFVYWGIALILSLISRIAEQQLSVKER 230 >gi|328956326|ref|YP_004373659.1| L-aspartate ABC transporter membrane protein; L-glutamate ABC transporter membrane protein [Coriobacterium glomerans PW2] gi|328456650|gb|AEB07844.1| L-aspartate ABC transporter membrane protein;L-glutamate ABC transporter membrane protein [Coriobacterium glomerans PW2] Length = 215 Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 41/125 (32%), Positives = 70/125 (56%), Gaps = 3/125 (2%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +A + +T+A +AEIVR GL ++P Q EAA + G RL++LPQ R+IIP L SQ Sbjct: 88 LAFTIFTSAVMAEIVRGGLNSIPDNQFEAARSQGFGFAAMLRLIILPQTFRTIIPALFSQ 147 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI---YLSLSIMIALFMNR 387 ++K+SS + A+ + I+ Q +++L++ F+ Y L+ I+LF+ Sbjct: 148 CTTVIKDSSYLAGINVAEFMYTTRVIMAQATNLSQVLLLYGFVFALYFILNFGISLFVRA 207 Query: 388 LNAKI 392 ++ Sbjct: 208 YQRRL 212 Score = 37.4 bits (85), Expect = 4.3, Method: Compositional matrix adjust. Identities = 24/70 (34%), Positives = 39/70 (55%), Gaps = 9/70 (12%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVG------AGRLSANKLVAWICRVYVEVFRNIPPL 142 I+ GFV T ++ ++ + I+GTL+ GRL + WI +Y+E+FR P L Sbjct: 12 IMGGFVRTVEISALAILCSLILGTLLALVKQFCTGRLCVFR---WIVSIYIELFRCTPNL 68 Query: 143 VVIFFLYKSV 152 + I F+Y +V Sbjct: 69 LWILFIYFTV 78 >gi|206579836|ref|YP_002239087.1| glutamine ABC transporter, permease protein [Klebsiella pneumoniae 342] gi|288935990|ref|YP_003440049.1| polar amino acid ABC transporter inner membrane subunit [Klebsiella variicola At-22] gi|206568894|gb|ACI10670.1| glutamine ABC transporter, permease protein [Klebsiella pneumoniae 342] gi|288890699|gb|ADC59017.1| polar amino acid ABC transporter, inner membrane subunit [Klebsiella variicola At-22] Length = 218 Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 38/116 (32%), Positives = 71/116 (61%) Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 + A+IAEI R ++++ +G EA++A+GL+ R V++P A R +IP L +Q++ +K Sbjct: 100 SGAYIAEITRGAILSINKGFKEASLAMGLSPRSTLLHVIMPLAFRRMIPALGNQWIISIK 159 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 ++SL + +G A+L G II +A+E+ IYL L++ ++ + +L +I Sbjct: 160 DTSLFIVIGVAELTRQGQEIIAGNFRALEVWTAVAMIYLFLTLCLSFLLKQLEKRI 215 >gi|16262492|ref|NP_435285.1| ABC transporter, permease [Sinorhizobium meliloti 1021] gi|307300764|ref|ZP_07580539.1| polar amino acid ABC transporter, inner membrane subunit [Sinorhizobium meliloti BL225C] gi|14523097|gb|AAK64697.1| ABC transporter, permease [Sinorhizobium meliloti 1021] gi|306904298|gb|EFN34883.1| polar amino acid ABC transporter, inner membrane subunit [Sinorhizobium meliloti BL225C] Length = 222 Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 41/121 (33%), Positives = 73/121 (60%), Gaps = 1/121 (0%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G +SP +L +AL A+ EI+R+G+ ++ +GQ+EA ALGL+ + R V++ Sbjct: 83 GLRLSPNSAAL-LALVVNFGAYGTEIIRAGIESIHKGQVEAGWALGLSRPQIFRYVVMKP 141 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378 A+R++ P LTSQ++ L+ N+S+ + DL + G + + T + E+ + IYL+LS Sbjct: 142 ALRTVYPALTSQFIYLMLNTSVVSVISADDLAAAGNDLQSATFASFEVYIAVTLIYLALS 201 Query: 379 I 379 + Sbjct: 202 V 202 >gi|322392133|ref|ZP_08065595.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus peroris ATCC 700780] gi|321145033|gb|EFX40432.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus peroris ATCC 700780] Length = 229 Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 52/173 (30%), Positives = 85/173 (49%), Gaps = 20/173 (11%) Query: 216 GKALPLLYISTFLIFGLPTLVLIALKYQLHFD---------------KPVLGQFNFIGG- 259 G A+ L + L+F +P +LIA Q+H+ P+L Q FI Sbjct: 30 GAAMTLQVFALVLVFSIPLGILIAFCLQIHWKLLHYMIDVYIWVMRGTPLLLQLIFIYYV 89 Query: 260 -STVSPEFMSLYIALSCYT---AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315 V F + A+ +T AA+ AEI R G+ +P+GQ EAA L T R ++ Sbjct: 90 LPNVGIRFDRVPAAIIAFTLNYAAYFAEIFRGGIATIPQGQYEAAKVLKFTPLATVRYII 149 Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368 LPQ + ++P + ++ ++L+K++SL A+G +DL+ T N+ I + L Sbjct: 150 LPQVTKIVLPSVFNEIMSLVKDTSLVYALGVSDLILASRTAANRDASLIPMFL 202 >gi|319779862|ref|YP_004139338.1| polar amino acid ABC transporter inner membrane subunit [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317165750|gb|ADV09288.1| polar amino acid ABC transporter, inner membrane subunit [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 224 Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 34/73 (46%), Positives = 52/73 (71%) Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 +A+ AE+ RSG+ ++PRGQ EA+ ALGL R V+LPQA+R +IPP+TS +++ K+ Sbjct: 105 SAYSAEVFRSGIESIPRGQFEASQALGLPFLLTLRKVVLPQAIRVVIPPMTSNCVSMFKD 164 Query: 338 SSLAVAVGFADLV 350 +SLA V +L+ Sbjct: 165 TSLASTVALPELL 177 >gi|299069940|emb|CBJ41224.1| putative amino-acid ABC transporter protein [Ralstonia solanacearum CMR15] Length = 226 Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 54/162 (33%), Positives = 86/162 (53%), Gaps = 15/162 (9%) Query: 205 TRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP 264 RLSR+ + + + + ++S I G P L+ + L Y + P+LG ++SP Sbjct: 46 ARLSRY---RLLRGMVMAWVSA--IRGTPALIHMLLAY--YVVPPLLGL-------SISP 91 Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 + AL+C T+A++ EI+R L +VP Q AA ALG+ ++ R VLLPQ I Sbjct: 92 LAAGIG-ALACNTSAYLVEILRGALSSVPDAQRAAAQALGMREQQVWRHVLLPQVFYRAI 150 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 PPLTS++ LLK SSL + +L +V Q+ +++ Sbjct: 151 PPLTSEFTILLKTSSLMSIIAVPELATVARNASLQSDLPLQV 192 >gi|116671350|ref|YP_832283.1| polar amino acid ABC transporter inner membrane subunit [Arthrobacter sp. FB24] gi|116611459|gb|ABK04183.1| amino acid ABC transporter membrane protein 2, PAAT family [Arthrobacter sp. FB24] Length = 279 Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 33/86 (38%), Positives = 59/86 (68%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 +F+++ L Y AA AEI+R+G+ ++P+GQ EA + +GLT ++ ++ LPQA+R ++ Sbjct: 129 QFIAVVAGLVLYNAAVFAEIIRAGIQSLPKGQREAGLTIGLTSFQSRMIIELPQAVRRMM 188 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLV 350 P L +Q + LLK++SL V + +L+ Sbjct: 189 PSLVAQLVVLLKDTSLGYIVAYGELL 214 >gi|328881414|emb|CCA54653.1| ABC-type polar amino acid transport system,ATPase component [Streptomyces venezuelae ATCC 10712] Length = 294 Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 39/134 (29%), Positives = 78/134 (58%), Gaps = 3/134 (2%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 E + + L+ + AA+ AEIVR G++AV GQ EAA +LG+ + R ++LPQAMRSI+ Sbjct: 161 EMSAAVLGLALHQAAYAAEIVRGGVLAVDEGQAEAAASLGIPRLRQLRRIVLPQAMRSIL 220 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL- 383 P ++ ++L K +S+ + +L + + G+ + ++++ Y+ L+ +++ Sbjct: 221 PNAANEIISLFKGTSIVSVMAIGELFYQVQVVYGRNGRVVPLLMVATAWYVLLTTALSVV 280 Query: 384 --FMNRLNAKIALK 395 ++ R AK +++ Sbjct: 281 QHYVERHYAKGSVR 294 >gi|310814769|ref|YP_003962733.1| polar amino acid ABC transporter, inner membrane subunit [Ketogulonicigenium vulgare Y25] gi|308753504|gb|ADO41433.1| polar amino acid ABC transporter, inner membrane subunit [Ketogulonicigenium vulgare Y25] Length = 264 Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 40/116 (34%), Positives = 67/116 (57%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P IAL A+F+AE+ R+G+++V GQ+EAA ALGL R ++ PQAMR++ Sbjct: 130 PLLWRAIIALLLAYASFLAEVFRAGILSVEVGQIEAAKALGLGRWHIFRHIVWPQAMRNV 189 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379 +PPL + ++ ++K+SSL +G D+ + + E + IYL+++I Sbjct: 190 LPPLGNDFVAMVKDSSLVSVLGVTDITQLAKLTSASNFRYFETYNVVALIYLTVTI 245 >gi|303240423|ref|ZP_07326940.1| polar amino acid ABC transporter, inner membrane subunit [Acetivibrio cellulolyticus CD2] gi|302591988|gb|EFL61719.1| polar amino acid ABC transporter, inner membrane subunit [Acetivibrio cellulolyticus CD2] Length = 236 Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 37/122 (30%), Positives = 75/122 (61%) Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 + A+++EI+R G+++V GQMEA ALGL++R +++PQA+++I+P L ++++ L+K Sbjct: 114 SGAYVSEIMRGGIMSVDHGQMEAGRALGLSYRITMLKIVVPQAIKNILPTLGNEFIALIK 173 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 +S+ VG ADL I + + + L+ IY+ L ++IA + + ++ + Sbjct: 174 ETSVVSFVGTADLYVAFNYIGTNSYEFMVPYLVMAIIYIVLVMIIASLIKIMERRLRKSD 233 Query: 397 KK 398 ++ Sbjct: 234 RR 235 >gi|260460787|ref|ZP_05809037.1| polar amino acid ABC transporter, inner membrane subunit [Mesorhizobium opportunistum WSM2075] gi|259033364|gb|EEW34625.1| polar amino acid ABC transporter, inner membrane subunit [Mesorhizobium opportunistum WSM2075] Length = 210 Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 54/178 (30%), Positives = 88/178 (49%), Gaps = 13/178 (7%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 +AL +Y+S F G P L+ + + L+F P +G + P F + I L Sbjct: 45 RALGAVYVSLFR--GTPCLIQL---FVLYFGGPQIG-------INLDP-FAAGVIGLGLN 91 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 A++AE +R +IAV RGQ EAA +G + + R V+LPQA R +I PL + LLK Sbjct: 92 IGAYMAESIRGAVIAVDRGQTEAARTIGFSRFQTLRKVVLPQAARLMIRPLGVNTVALLK 151 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394 S+L + +L I T + EI + +Y+ + +A ++ L+ + A+ Sbjct: 152 GSALVSTISVVELTYTAQRFIGSTYKPFEIFGVAALLYMVMVYALARIVDMLDKRFAI 209 >gi|90409072|ref|ZP_01217197.1| putative ABC-type arginine transport system, permease component [Psychromonas sp. CNPT3] gi|90309829|gb|EAS37989.1| putative ABC-type arginine transport system, permease component [Psychromonas sp. CNPT3] Length = 246 Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 40/136 (29%), Positives = 71/136 (52%), Gaps = 1/136 (0%) Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321 +SP F + + + A++ E R ++AV +GQ+EAA A G++ K VL PQ MR Sbjct: 112 ISPYFAGI-VTIGFIFGAYMTETFRGAILAVDKGQIEAARAYGMSQYKVFSRVLFPQMMR 170 Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 +P + + +L LLK ++L +G D+V + G T Q L FI+L + + Sbjct: 171 HALPGIGNNWLVLLKATALVSVIGLQDMVKIAGDAAGATQQPFTFYLAIAFIFLFFTSVS 230 Query: 382 ALFMNRLNAKIALKEK 397 ++F+ + ++K + Sbjct: 231 SVFLKWAEHRYSIKVR 246 >gi|16119711|ref|NP_396417.1| ABC transporter, membrane spanning protein [Agrobacterium tumefaciens str. C58] gi|15162295|gb|AAK90858.1| ABC transporter, membrane spanning protein [Agrobacterium tumefaciens str. C58] Length = 242 Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 40/98 (40%), Positives = 59/98 (60%), Gaps = 4/98 (4%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+S IALS A++AEI+RSGL AV +GQ A +ALG+T +++PQA R ++P Sbjct: 88 FVSAVIALSLNEGAYMAEIIRSGLQAVKKGQRTAGLALGMTRFAVMCYIVIPQAARIVLP 147 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363 P +Q + +LK S+L V +L+ V NQT + Sbjct: 148 PTGNQMIGMLKTSALVSVVAVEELLLVA----NQTASS 181 >gi|134293670|ref|YP_001117406.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia vietnamiensis G4] gi|134136827|gb|ABO57941.1| amino acid ABC transporter ATP-binding protein, PAAT family / amino acid ABC transporter membrane protein, PAAT family [Burkholderia vietnamiensis G4] Length = 594 Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 45/137 (32%), Positives = 77/137 (56%), Gaps = 4/137 (2%) Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321 +SP F + + L+ AAF AE++R G++AV +GQ+EAA ALGL + T ++LPQAMR Sbjct: 163 ISP-FFAAVLGLTLNHAAFSAEVIRGGILAVDQGQLEAAAALGLPRGRQTTRIVLPQAMR 221 Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL---IWMFIYLSLS 378 +I+P + + L K +S+ + +L I + I +++ +W I L++ Sbjct: 222 AILPTAFNDLITLAKGTSMVYVLAMPELFYTVQVIYRRNLDVIPLLMVATVWYLIILTVL 281 Query: 379 IMIALFMNRLNAKIALK 395 I + + R A+ AL+ Sbjct: 282 SAIQVQVERHYARGALR 298 >gi|16804385|ref|NP_465870.1| hypothetical protein lmo2347 [Listeria monocytogenes EGD-e] gi|47096045|ref|ZP_00233647.1| amino acid ABC transporter, permease protein [Listeria monocytogenes str. 1/2a F6854] gi|224503523|ref|ZP_03671830.1| hypothetical protein LmonFR_13622 [Listeria monocytogenes FSL R2-561] gi|254826828|ref|ZP_05231515.1| amino acid ABC transporter [Listeria monocytogenes FSL N3-165] gi|254831228|ref|ZP_05235883.1| hypothetical protein Lmon1_07717 [Listeria monocytogenes 10403S] gi|254901127|ref|ZP_05261051.1| hypothetical protein LmonJ_14973 [Listeria monocytogenes J0161] gi|254938338|ref|ZP_05270035.1| amino acid ABC transporter [Listeria monocytogenes F6900] gi|255028989|ref|ZP_05300940.1| hypothetical protein LmonL_07141 [Listeria monocytogenes LO28] gi|16411835|emb|CAD00425.1| lmo2347 [Listeria monocytogenes EGD-e] gi|47015642|gb|EAL06573.1| amino acid ABC transporter, permease protein [Listeria monocytogenes str. 1/2a F6854] gi|258599206|gb|EEW12531.1| amino acid ABC transporter [Listeria monocytogenes FSL N3-165] gi|258610950|gb|EEW23558.1| amino acid ABC transporter [Listeria monocytogenes F6900] Length = 235 Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 65/208 (31%), Positives = 103/208 (49%), Gaps = 15/208 (7%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 +F F++ I L+L R +H + + + Y+S F P ++ I L Y P+ Sbjct: 31 LFGFIIAIGLTLI-----RMYHVRFLEPIAKFYVSFFR--STPAILHIMLIY---LGIPL 80 Query: 251 LGQF---NFIGGSTVS--PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305 L F +F G + + P + + IALS A++ EI+RSG+IAV GQMEAA ++G Sbjct: 81 LVDFLSKSFGLGISANKIPVVVFVIIALSFTAGAYLTEILRSGIIAVDIGQMEAAYSVGY 140 Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365 TH +A R VLLPQA +P T+ + L +S+A V ++ + + + +E Sbjct: 141 THGQAIRKVLLPQAFMIALPNFTNLCIGFLHTTSIAAIVAVPEITGMATIVASDNYAFLE 200 Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIA 393 + IY L+I+I L IA Sbjct: 201 AFIGAALIYWFLTILIEAINYILEKNIA 228 >gi|329116786|ref|ZP_08245503.1| ABC transporter, permease protein [Streptococcus parauberis NCFD 2020] gi|326907191|gb|EGE54105.1| ABC transporter, permease protein [Streptococcus parauberis NCFD 2020] Length = 522 Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 36/109 (33%), Positives = 63/109 (57%) Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 +S T A++ EIVR G+++V GQ EAA ALG TH + R +++PQ MR+I+P ++++ Sbjct: 386 VSINTGAYMTEIVRGGILSVDNGQFEAATALGFTHGQTMRKIVIPQVMRNILPATGNEFV 445 Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 +K++S+ + +L G T+ Q Q + + IY L+ + Sbjct: 446 INIKDTSVLNVISVVELYFSGNTVATQNYQYFQTFSVIAVIYFILTFTV 494 >gi|260914457|ref|ZP_05920926.1| L-cystine ABC superfamily ATP binding cassette transporter, membrane protein [Pasteurella dagmatis ATCC 43325] gi|260631558|gb|EEX49740.1| L-cystine ABC superfamily ATP binding cassette transporter, membrane protein [Pasteurella dagmatis ATCC 43325] Length = 238 Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 41/138 (29%), Positives = 81/138 (58%), Gaps = 7/138 (5%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G T+ P F + IA S A+ +E VR+ ++++P+GQ EA+ A+G+ +R+A ++PQ Sbjct: 102 GITLDP-FPTAIIAFSLNIGAYASETVRAAILSIPKGQWEASYAIGMGYRQAFIRTIIPQ 160 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW---MFIYL 375 AMR +PPL++ +++ +K++SLA V +L + N + E IL++ IY Sbjct: 161 AMRVSVPPLSNTFISTVKDTSLASLVLVTELFRIAQ---NVAASSYEFILVYSQAALIYW 217 Query: 376 SLSIMIALFMNRLNAKIA 393 + ++++ R+ +++ Sbjct: 218 IICFVLSIVQQRVEMRLS 235 >gi|290512796|ref|ZP_06552161.1| glutamine ABC transporter permease [Klebsiella sp. 1_1_55] gi|289774679|gb|EFD82682.1| glutamine ABC transporter permease [Klebsiella sp. 1_1_55] Length = 219 Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 38/116 (32%), Positives = 71/116 (61%) Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 + A+IAEI R ++++ +G EA++A+GL+ R V++P A R +IP L +Q++ +K Sbjct: 101 SGAYIAEITRGAILSINKGFKEASLAMGLSPRSTLLHVIMPLAFRRMIPALGNQWIISIK 160 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 ++SL + +G A+L G II +A+E+ IYL L++ ++ + +L +I Sbjct: 161 DTSLFIVIGVAELTRQGQEIIAGNFRALEVWTAVAMIYLFLTLCLSFLLKQLEKRI 216 >gi|257790013|ref|YP_003180619.1| polar amino acid ABC transporter, inner membrane subunit [Eggerthella lenta DSM 2243] gi|325830079|ref|ZP_08163536.1| ABC transporter, permease protein [Eggerthella sp. HGA1] gi|257473910|gb|ACV54230.1| polar amino acid ABC transporter, inner membrane subunit [Eggerthella lenta DSM 2243] gi|325487546|gb|EGC89984.1| ABC transporter, permease protein [Eggerthella sp. HGA1] Length = 450 Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 60/211 (28%), Positives = 110/211 (52%), Gaps = 17/211 (8%) Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248 + + SF L I + L + + R + +AL YI+ ++ G P + I + + F Sbjct: 217 LVIVSFPLAIPIGLLWSFM-RMAKSRVPRALGATYIN--IVRGTPLFLQIYIAF---FGL 270 Query: 249 PVLG-QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307 P+LG + + F+ I L ++A++AEI R+G+ ++ GQ EAA +LG+ Sbjct: 271 PLLGIKMDL---------FVLGAIVLVLNSSAYLAEIFRAGIQSINGGQFEAARSLGMNG 321 Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367 + V++PQ +R +IP +TS+++ + K++SL AVG +++ TI TG I Sbjct: 322 AQTMFYVIIPQTVRRVIPTMTSEFILMYKDTSLLAAVGVMEIMMYAKTITAATGNVTPYI 381 Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 + F YL ++I + +N + ++A KK Sbjct: 382 VAAGF-YLIVTIPMTKLINSMEQRMAGGRKK 411 >gi|307319175|ref|ZP_07598605.1| polar amino acid ABC transporter, inner membrane subunit [Sinorhizobium meliloti AK83] gi|306895282|gb|EFN26038.1| polar amino acid ABC transporter, inner membrane subunit [Sinorhizobium meliloti AK83] Length = 222 Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 41/121 (33%), Positives = 73/121 (60%), Gaps = 1/121 (0%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G +SP +L +AL A+ EI+R+G+ ++ +GQ+EA ALGL+ + R V++ Sbjct: 83 GLRLSPNSAAL-LALVVNFGAYGTEIIRAGIESIHKGQVEAGWALGLSRPQIFRYVVMKP 141 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378 A+R++ P LTSQ++ L+ N+S+ + DL + G + + T + E+ + IYL+LS Sbjct: 142 ALRTVYPALTSQFIYLMLNTSVVSVISADDLAAAGNDLQSATFASFEVYIAVTLIYLALS 201 Query: 379 I 379 + Sbjct: 202 V 202 >gi|289671691|ref|ZP_06492581.1| glutamine ABC transporter, permease protein [Pseudomonas syringae pv. syringae FF5] gi|330980535|gb|EGH78638.1| glutamine ABC transporter, permease protein [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 246 Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 42/133 (31%), Positives = 74/133 (55%), Gaps = 10/133 (7%) Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286 +++ G+P L++I Y F P+L N G F ++ L Y +A++ EI+R Sbjct: 69 YVMRGIPLLMVIFWTY---FLVPLLIGHNITG-------FTTMLCTLVVYQSAYLCEIIR 118 Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346 + A+P GQ EA+ ALG+ + + T V+LPQA+ + +P L SQ+++++K +SL + Sbjct: 119 GAIQALPTGQYEASRALGMGYLRTTIWVILPQALYNALPSLISQFISIIKETSLGYVINV 178 Query: 347 ADLVSVGGTIINQ 359 ++ I NQ Sbjct: 179 QEVTFAANQINNQ 191 >gi|290955800|ref|YP_003486982.1| ABC transporter transmembrane protein [Streptomyces scabiei 87.22] gi|260645326|emb|CBG68412.1| putative transport system transmembrane component [Streptomyces scabiei 87.22] Length = 328 Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 65/226 (28%), Positives = 109/226 (48%), Gaps = 18/226 (7%) Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLI-- 238 +T++ A V + GI+L+L RLS +++ +YI + + +P +V++ Sbjct: 83 ITLEVTAYSAVLGLIGGILLAL--ARLS---DSPVLRSVSWVYI--WALRSIPLIVVLLF 135 Query: 239 -----ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293 AL L P F S ++ + I LS AA+ AE+VR G+++V Sbjct: 136 LYNFSALYQTLSLGVPFGPAFFTFDESRLATDMAVAVIGLSLNEAAYAAEVVRGGILSVD 195 Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV--- 350 +GQ EAA ALGL R ++ PQA+RSI P +Q + L+K++SL V DL Sbjct: 196 QGQHEAASALGLPKGYQFRRIVFPQALRSITPNYVNQLIGLIKSTSLVFYVSLLDLFGTA 255 Query: 351 -SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395 ++G T + + +W I S+ +I ++ R A+ A + Sbjct: 256 QAMGSTYPGDIVPLLLVSTVWYLILTSVVSVIQFYVERYYARGATR 301 >gi|271502392|ref|YP_003335418.1| polar amino acid ABC transporter inner membrane subunit [Dickeya dadantii Ech586] gi|270345947|gb|ACZ78712.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya dadantii Ech586] Length = 227 Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 60/207 (28%), Positives = 110/207 (53%), Gaps = 17/207 (8%) Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL- 251 + VLG+VL+L R SR L YIS F G+P+LV + + ++F P L Sbjct: 37 AIVLGLVLAL--VRESRFV---VVSKLVEFYISLFR--GIPSLVQL---FIIYFGLPQLF 86 Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311 N + T + I S +A++AEI R+ L +V GQ EA +++G+ + Sbjct: 87 PSLNGLSAMTAA------IIGFSLKNSAYMAEIFRAALASVDFGQTEAGLSVGMNKVQIY 140 Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371 R ++LPQAM + +P + +++L+K++S+A A+G ++L + G I ++ + E L+ Sbjct: 141 RRIVLPQAMLNALPATGNTFISLIKDTSVAFALGVSELFAEGKMIAAESLRFFETFLVVG 200 Query: 372 FIYLSLSIMIALFMNRLNAKIALKEKK 398 IY L ++ + ++L K++ ++ Sbjct: 201 LIYWMLIVVYSWLQSQLEKKLSHSRQR 227 >gi|81428468|ref|YP_395468.1| amino acid ABC transporter transmembrane protein [Lactobacillus sakei subsp. sakei 23K] gi|78610110|emb|CAI55159.1| Putative amino acid ABC transporter, membrane-spanning subunit [Lactobacillus sakei subsp. sakei 23K] Length = 213 Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 41/125 (32%), Positives = 71/125 (56%), Gaps = 1/125 (0%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 F + IA AA+ AEI R G AV GQ+EAA LGLT+ + +++PQ ++ ++ Sbjct: 83 RFDAALIAFILNYAAYFAEIFRGGFQAVDDGQIEAASVLGLTYPQTILKIIVPQTVKIVL 142 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 P + ++ +NL+K+SSL +G DL+ G + + ++L+ + IYL+L+ + Sbjct: 143 PSVGNEVINLIKDSSLVYVIGIGDLLRAGNVASARDVNLVPLLLVGV-IYLALTAICTWL 201 Query: 385 MNRLN 389 + RL Sbjct: 202 LGRLE 206 >gi|327396675|dbj|BAK14096.1| probable amino-acid ABC transporter permease protein YckA [Pantoea ananatis AJ13355] Length = 216 Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 38/117 (32%), Positives = 67/117 (57%), Gaps = 1/117 (0%) Query: 275 CYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNL 334 C++ F+AEI RSG+ +V RGQ+EAA ++G++ KA R V+LPQA +PP ++ + + Sbjct: 96 CFST-FLAEIFRSGIESVDRGQLEAARSMGMSFFKAMRRVILPQAFHVALPPYSNTLVMM 154 Query: 335 LKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 LK+S+LA + ++ G + T + + +YL+L + + F L + Sbjct: 155 LKDSALASTIAVTEMTRQGQLLAASTFDNTTVYTLVALLYLTLCMPLLAFTKHLENR 211 >gi|320334509|ref|YP_004171220.1| polar amino acid ABC transporter inner membrane subunit [Deinococcus maricopensis DSM 21211] gi|319755798|gb|ADV67555.1| polar amino acid ABC transporter, inner membrane subunit [Deinococcus maricopensis DSM 21211] Length = 272 Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 61/207 (29%), Positives = 107/207 (51%), Gaps = 15/207 (7%) Query: 191 VFSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244 V +LG+V L T R + + PLL F+ LP L+ K + Sbjct: 69 VIGLILGVVAGLMKTSAYWIVRAPASLYVWLMRGTPLLVQILFVYNALP-LLFPPFKALM 127 Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304 + G + GG PE ++ AL+ A+ AE++R+G+ AVPRGQ EAA +LG Sbjct: 128 DWA----GTWPIEGG----PEIIAGITALALNVGAYNAEVIRAGIQAVPRGQGEAARSLG 179 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364 L+ +A ++LPQA+R ++PPL + + LLK++SL ++ +L G + ++T + + Sbjct: 180 LSGGQAMLTIILPQALRIVVPPLVNNVVALLKDTSLVSSIALLELTLAGNRVSSETFKPV 239 Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAK 391 + +YL+L+ ++ F ++L + Sbjct: 240 PSLATIGGVYLALTTVLTFFTDQLERR 266 >gi|317472159|ref|ZP_07931491.1| inner membrane transporter [Anaerostipes sp. 3_2_56FAA] gi|316900563|gb|EFV22545.1| inner membrane transporter [Anaerostipes sp. 3_2_56FAA] Length = 225 Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 48/179 (26%), Positives = 92/179 (51%), Gaps = 28/179 (15%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKAL---PLLYISTFLIFGLPTLVLIALKYQL--- 244 + LG +L+L R E+ GK+ + Y+ +I G PT+ + + Y + Sbjct: 34 ILGVALGTILALM-----RMTAERRGKSTLLSKIAYVYIDIIRGTPTVTQLLIMYFVVLK 88 Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304 D ++G F +AA++AEI+R+G++AV GQME +LG Sbjct: 89 GVDGLIVGTVTF-----------------GLNSAAYVAEIIRAGILAVDHGQMEGGRSLG 131 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363 L++ + + ++LPQA+++I+P L ++++ L+K +++ V DL V + ++T +A Sbjct: 132 LSYGQTMKDIILPQAVKNILPALGNEFIVLIKETAILGYVSIVDLTKVADFVTSRTYEA 190 >gi|160941893|ref|ZP_02089220.1| hypothetical protein CLOBOL_06789 [Clostridium bolteae ATCC BAA-613] gi|158435390|gb|EDP13157.1| hypothetical protein CLOBOL_06789 [Clostridium bolteae ATCC BAA-613] Length = 226 Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 45/124 (36%), Positives = 69/124 (55%), Gaps = 4/124 (3%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + +S AF++E +R LI+V GQ EAA+A G+T + T +++PQA+R +PPL + Sbjct: 101 VIMSLNMGAFVSESIRGALISVDEGQREAAMAFGMTGFQMTIRIVIPQAIRVALPPLFND 160 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE----IILIWMFIYLSLSIMIALFMN 386 +NL K SSLA VG D++ T Q E ++LI+ I L L+ + + Sbjct: 161 LINLFKMSSLAFLVGVRDVMGAAKIEGANTFQFFECYACVMLIYWVITLILTAIQKVLEK 220 Query: 387 RLNA 390 R NA Sbjct: 221 RCNA 224 >gi|26249862|ref|NP_755902.1| amino-acid ABC transporter permease YhdY [Escherichia coli CFT073] gi|26110290|gb|AAN82476.1|AE016767_236 Hypothetical amino-acid ABC transporter permease protein yhdY [Escherichia coli CFT073] Length = 368 Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 35/96 (36%), Positives = 60/96 (62%) Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315 F+ T + + + + + +A++AE+VR GL A+P+GQ EAA +L L + K LV+ Sbjct: 222 FMAEDTSIDKLIRALVGVILFQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQGLVI 281 Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 +PQA++ +IP L + + L K++SL + +G DL S Sbjct: 282 MPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFS 317 >gi|325519342|gb|EGC98767.1| amino acid ABC transporter, permease protein [Burkholderia sp. TJI49] Length = 231 Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 62/221 (28%), Positives = 106/221 (47%), Gaps = 15/221 (6%) Query: 185 TNAKIFVFSFVLGIVLSL---FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALK 241 T K+ V S V G L++ FA + KA T +I G P LV I L Sbjct: 19 TTVKLLVISAVFGFGLAIAVAFARLSPNPLVARGSKAF------TEVIRGTPLLVQIYLI 72 Query: 242 YQLHFDKPVLGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQM 297 Y + + + + S + P F + AL A++ E++R+GL VP+G++ Sbjct: 73 Y--YGVGSLFAGWPALRDSVLWPFLRDGFWYVAFALVISVGAYVGEVLRAGLRGVPKGEI 130 Query: 298 EAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII 357 EAA A+G+ R V LP+A++ ++P L + + +LK+++LA V D++ I Sbjct: 131 EAARAMGMRPSMIARRVWLPRAIQILLPTLAGETVMMLKSTALASTVAVMDVLGAANYIR 190 Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 QT + E +L IY+ L+ +I RL ++ ++ + Sbjct: 191 AQTLRTYEPLLAIAVIYVVLAFLIERVFGRLERRVPVRMPR 231 >gi|320184056|gb|EFW58876.1| Glutamate Aspartate transport system permease protein GltK [Shigella flexneri CDC 796-83] Length = 367 Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 34/76 (44%), Positives = 53/76 (69%) Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335 + +A++AE+VR GL A+P+GQ EAA +L L + K LV+LPQA++ +IP L + + L Sbjct: 241 FQSAYVAEVVRGGLQALPKGQYEAAESLTLGYWKTQGLVILPQALKLVIPGLVNTIIALF 300 Query: 336 KNSSLAVAVGFADLVS 351 K++SL + +G DL S Sbjct: 301 KDTSLVIIIGLFDLFS 316 >gi|258654114|ref|YP_003203270.1| polar amino acid ABC transporter inner membrane subunit [Nakamurella multipartita DSM 44233] gi|258557339|gb|ACV80281.1| polar amino acid ABC transporter, inner membrane subunit [Nakamurella multipartita DSM 44233] Length = 233 Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 40/105 (38%), Positives = 65/105 (61%), Gaps = 3/105 (2%) Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335 YT+ F+ E +RSG+ VP GQ EAA A+GL + +V+LPQA+R++I PL S + L Sbjct: 112 YTSTFVCEAIRSGINTVPPGQAEAARAIGLKFTQVLGIVVLPQAIRAVIAPLGSVLIALT 171 Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQ---AIEIILIWMFIYLSL 377 KN+++A A+G A+ + T++ A+ +++ FI L+L Sbjct: 172 KNTTVASAIGVAEAALLMNTLLENEADKFTAVFLVIAAGFIVLTL 216 >gi|206577524|ref|YP_002237665.1| amino acid ABC transporter, permease protein [Klebsiella pneumoniae 342] gi|288934542|ref|YP_003438601.1| polar amino acid ABC transporter inner membrane subunit [Klebsiella variicola At-22] gi|290508742|ref|ZP_06548113.1| polar amino acid transport system ATP-binding protein [Klebsiella sp. 1_1_55] gi|206566582|gb|ACI08358.1| amino acid ABC transporter, permease protein [Klebsiella pneumoniae 342] gi|288889251|gb|ADC57569.1| polar amino acid ABC transporter, inner membrane subunit [Klebsiella variicola At-22] gi|289778136|gb|EFD86133.1| polar amino acid transport system ATP-binding protein [Klebsiella sp. 1_1_55] Length = 312 Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 63/220 (28%), Positives = 109/220 (49%), Gaps = 22/220 (10%) Query: 171 LNNRGLSFPTLTMDTNAKIFVF-SFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS---- 225 + N LS P A+ F S + G++++L T +S F G L L+ +S Sbjct: 37 MGNSMLSNPRFEWSVIAENFTGPSIIQGVLMTLQLTAISVIFGFAGGTILALMRLSSNPV 96 Query: 226 --------TFLIFGLPTLVLIALKYQL-------HFDKPVLGQ-FNFIGGSTVSPEFMSL 269 T+ G+P LV + L Y + P +G+ ++ S +SP F + Sbjct: 97 LVAVSWGYTWFFRGVPMLVQLFLWYNIAALYPTISISLPWVGEIWSASANSLISP-FSAA 155 Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329 IAL + +A+ AEI+R+G+ +V GQ+EAA ALG + +LPQAMR+I+PP + Sbjct: 156 VIALVMHQSAYAAEIIRAGIQSVGTGQVEAARALGYRPAQIFLHTILPQAMRAILPPAGN 215 Query: 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369 + + LK +++ + D++ I +T + I ++L+ Sbjct: 216 EVIGQLKTTAVVSVISLQDVLFSAQIIYQRTYEVIPLLLV 255 >gi|167564741|ref|ZP_02357657.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia oklahomensis EO147] gi|167574721|ref|ZP_02367595.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia oklahomensis C6786] Length = 240 Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 55/199 (27%), Positives = 100/199 (50%), Gaps = 12/199 (6%) Query: 204 ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL----GQFNFIGG 259 A +LSRH ++ + L LY + F G+P L++I Y +F L GQ+ G Sbjct: 45 AAKLSRH---RSARLLGDLYTTVFR--GVPELLVI---YLFYFGGSTLVTTVGQWFGAEG 96 Query: 260 STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319 P F+ +A+ + A+ AE+ R+ ++AV +G++EAA ++G+ R R +L+PQ Sbjct: 97 FVGVPPFVIGALAVGMISGAYQAEVYRAAVLAVSKGELEAARSIGMPARMVLRRILIPQV 156 Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379 +R +P + + + LK+S+L G A+L+ N T Q + +YL ++ Sbjct: 157 LRFALPGIGNVWQLSLKDSALISVTGLAELLRTSQIAANSTHQYFVFFVAGGALYLLMTG 216 Query: 380 MIALFMNRLNAKIALKEKK 398 + NR+ A + ++ Sbjct: 217 LSNRVFNRVEAHVGRSFRR 235 Score = 36.2 bits (82), Expect = 8.4, Method: Compositional matrix adjust. Identities = 18/67 (26%), Positives = 34/67 (50%) Query: 83 SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142 + + +L+ + T L + + + G LV A +LS ++ + +Y VFR +P L Sbjct: 12 DGWGSVLLLAALMTVALTLAALAVGAVFGALVAAAKLSRHRSARLLGDLYTTVFRGVPEL 71 Query: 143 VVIFFLY 149 +VI+ Y Sbjct: 72 LVIYLFY 78 >gi|166213863|ref|ZP_02239898.1| glutamine ABC transporter, permease protein [Yersinia pestis biovar Antiqua str. B42003004] gi|166205037|gb|EDR49517.1| glutamine ABC transporter, permease protein [Yersinia pestis biovar Antiqua str. B42003004] Length = 218 Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 40/118 (33%), Positives = 70/118 (59%) Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 + A+IAEI R + ++ G EA +ALGL+ R V+ P A+R ++PPL +Q++ +K Sbjct: 100 SGAYIAEITRGAVPSIHSGFREAGLALGLSQRGTLLYVIAPLALRRMLPPLGNQWIVSIK 159 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394 ++SL + +G A+L G II +A+EI IYL +++ ++ + RL K+ + Sbjct: 160 DTSLFIVIGVAELTRQGQEIIAGNFRAMEIWSAVAVIYLIITLALSFVLRRLERKLKI 217 >gi|116670156|ref|YP_831089.1| polar amino acid ABC transporter inner membrane subunit [Arthrobacter sp. FB24] gi|116610265|gb|ABK02989.1| amino acid ABC transporter membrane protein, PAAT family [Arthrobacter sp. FB24] Length = 271 Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 40/104 (38%), Positives = 65/104 (62%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + LS A+I EIVR + +V GQ+EA+ +LGL + K+ + V++PQA + + P L +Q Sbjct: 148 LTLSLNAGAYITEIVRGSIQSVDPGQLEASRSLGLGYAKSMQKVVVPQAFKIMTPSLINQ 207 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374 + +LK+SSL +A+GFA+L+ G I + E +LI +Y Sbjct: 208 LIIMLKDSSLLLAIGFAELLYQGQQIYAGNFRITETLLIVAVLY 251 >gi|313890332|ref|ZP_07823964.1| ABC transporter, permease protein [Streptococcus pseudoporcinus SPIN 20026] gi|313121318|gb|EFR44425.1| ABC transporter, permease protein [Streptococcus pseudoporcinus SPIN 20026] Length = 523 Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 36/109 (33%), Positives = 63/109 (57%) Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 +S T A++ EIVR G+ AV +GQ EAA ALG +H + R ++LPQ +R+I+P ++++ Sbjct: 384 VSINTGAYMTEIVRGGIFAVDQGQFEAATALGFSHGQTMRKIVLPQVIRNILPATGNEFV 443 Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 +K++S+ + +L G T+ Q Q + + IY L+ + Sbjct: 444 INIKDTSVLNVISVVELYFSGNTVATQNYQYFQTFSVIALIYFILTFTV 492 >gi|291619133|ref|YP_003521875.1| YhdY [Pantoea ananatis LMG 20103] gi|291154163|gb|ADD78747.1| YhdY [Pantoea ananatis LMG 20103] Length = 366 Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 36/96 (37%), Positives = 59/96 (61%) Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315 F+ T + + + + + +A++AE+VR GL A+P+GQ EAA +L L + K LV+ Sbjct: 220 FMAEGTTIDKLVRALVGVILFQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQMLVI 279 Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 LPQA++ IP L + + L K++SL + +G DL S Sbjct: 280 LPQALKLTIPGLVNTIIALFKDTSLVIIIGLFDLFS 315 >gi|262278836|ref|ZP_06056621.1| glutamate/aspartate transport system permease GltJ [Acinetobacter calcoaceticus RUH2202] gi|262259187|gb|EEY77920.1| glutamate/aspartate transport system permease GltJ [Acinetobacter calcoaceticus RUH2202] Length = 280 Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 41/123 (33%), Positives = 73/123 (59%) Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 AL YTAA ++E +R+G+ V GQ AA A+G T ++ R V+LP A R++ P +TS+ Sbjct: 150 ALGLYTAARVSEHIRAGINTVSTGQKFAASAVGFTTAQSYRYVILPVAYRTVWPTITSEA 209 Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 +N+ KNS++ A+ + + T+ +T Q I I+++ +YL ++ I M + + Sbjct: 210 MNVFKNSAVLYALSVLNFFAYTKTMREETSQDIIILILSTPVYLIITYSIKFVMAWIEKR 269 Query: 392 IAL 394 +A+ Sbjct: 270 MAV 272 Score = 41.2 bits (95), Expect = 0.31, Method: Compositional matrix adjust. Identities = 23/56 (41%), Positives = 33/56 (58%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147 G W A + A ++G+L+G R NK +A+I YVE+FRNIP +V +FF Sbjct: 54 GVFTMVWTAIIAFLIAFLLGSLLGVIRTLPNKPLAFIGNCYVEIFRNIPLIVQLFF 109 >gi|209558800|ref|YP_002285272.1| Putative glutamine-binding periplasmic protein [Streptococcus pyogenes NZ131] gi|209540001|gb|ACI60577.1| Putative glutamine-binding periplasmic protein [Streptococcus pyogenes NZ131] Length = 498 Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 34/88 (38%), Positives = 57/88 (64%) Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 +S T A+++EIVR G+ AV +GQ EAA ALG TH + R ++LPQ +R+I+P ++++ Sbjct: 383 VSINTGAYMSEIVRGGIFAVDKGQFEAATALGFTHGQTMRKIVLPQVVRNILPATGNEFV 442 Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQT 360 +K++S+ + +L G T+ QT Sbjct: 443 INIKDTSVLNVISVVELYFSGNTVATQT 470 >gi|126653498|ref|ZP_01725591.1| putative amino acid ABC transporter, permease protein [Bacillus sp. B14905] gi|126589776|gb|EAZ83910.1| putative amino acid ABC transporter, permease protein [Bacillus sp. B14905] Length = 253 Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 40/106 (37%), Positives = 64/106 (60%), Gaps = 2/106 (1%) Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 AA ++E++RS +A+P+GQ EAA+++GLT +A R ++ PQA+ +P + + LL+ Sbjct: 127 AAIMSEVMRSAYLAIPKGQFEAAVSVGLTPIQAYRRIIFPQALVVALPNFGNGMIALLQE 186 Query: 338 SSLAVAVGFADLVSVGGTII--NQTGQAIEIILIWMFIYLSLSIMI 381 +LA +G D+V II N A+EI + IY LSI+I Sbjct: 187 GALAYTIGLIDIVGKANLIIASNINAHALEIYIALAIIYWVLSIII 232 >gi|86360052|ref|YP_471941.1| amino acid ABC transporter ATP-binding protein [Rhizobium etli CFN 42] gi|86284154|gb|ABC93214.1| probable amino acid ABC transporter, ATP-binding protein [Rhizobium etli CFN 42] Length = 591 Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 40/133 (30%), Positives = 77/133 (57%), Gaps = 3/133 (2%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + ++ L+ +AF AEIVR G+++V GQ+EAA ALGL R+ ++LPQAMRSI+P Sbjct: 166 FAAAFLGLTLNQSAFFAEIVRGGILSVDHGQLEAAAALGLPRRRQAFRIVLPQAMRSILP 225 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL---IWMFIYLSLSIMIA 382 ++ + L K++S+ + +L I + + I +++ +W I +++ + Sbjct: 226 TGFNELIGLAKSTSMVYVLALPELFYTVQVIYRRNLEVIPLLMVATVWYLIIMTVLSVAQ 285 Query: 383 LFMNRLNAKIALK 395 ++ R ++ A++ Sbjct: 286 HYIERYFSRGAVR 298 >gi|16262711|ref|NP_435504.1| ABC transporter, permease [Sinorhizobium meliloti 1021] gi|307312873|ref|ZP_07592502.1| polar amino acid ABC transporter, inner membrane subunit [Sinorhizobium meliloti BL225C] gi|14523337|gb|AAK64916.1| ABC transporter, permease [Sinorhizobium meliloti 1021] gi|306899387|gb|EFN30020.1| polar amino acid ABC transporter, inner membrane subunit [Sinorhizobium meliloti BL225C] Length = 227 Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 50/168 (29%), Positives = 89/168 (52%), Gaps = 10/168 (5%) Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP----EFMSLYIALSCYTAAFI 281 T++ G P LV I + Y + P QF +I S P F +ALS T A++ Sbjct: 57 TYVFRGTPILVQIFIVY---YGLP---QFEWIRESIFWPILRDPFGCAILALSLNTGAYL 110 Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341 +EI R G++AV RG +EA ALG++ + P A+R +P ++ ++L+K+++LA Sbjct: 111 SEIFRGGVLAVERGLLEAGAALGMSATHRFIYITTPLAIRIALPAYGNEVISLMKSTALA 170 Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 + D+ +G TI+ +T ++ L +Y++++ +I + RL Sbjct: 171 STITLVDMTGIGRTIVAETFAPYQVFLSLAIVYVAITWIIQRSVKRLE 218 >gi|33592624|ref|NP_880268.1| putative inner membrane component of binding-protein-dependent transport system [Bordetella pertussis Tohama I] gi|33572270|emb|CAE41822.1| putative inner membrane component of binding-protein-dependent transport system [Bordetella pertussis Tohama I] Length = 230 Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 62/206 (30%), Positives = 101/206 (49%), Gaps = 18/206 (8%) Query: 189 IFVFSFVLGIVLSLFAT--RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246 +F S VL + L L RLS+ G L YI +I G P L+ + + +++ Sbjct: 23 LFFCSAVLAVALGLLVCLCRLSKSRVLSRGARL---YID--IIRGTPLLLQL---FYIYY 74 Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306 P LG V F++ + L+ A++AE+ RSG+ +V GQ EAA ALGL Sbjct: 75 GMPELG--------VVINAFVAGVLGLTLNFGAYLAELFRSGIQSVDSGQYEAARALGLN 126 Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 R V+LPQA+R++ P L + L L+K +SL + +L+ G + T QA+ + Sbjct: 127 KVDRLRRVVLPQAVRTVFPALGNYALVLIKETSLVAVISVYELMRAGEMLAGATFQALTV 186 Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKI 392 + IY ++ ++A R ++ Sbjct: 187 YTMVGAIYFAMCSVLAHLFRRSEKRL 212 >gi|317489459|ref|ZP_07947969.1| His/Glu/Gln/Arg/opine family amino ABC transporter [Eggerthella sp. 1_3_56FAA] gi|316911388|gb|EFV32987.1| His/Glu/Gln/Arg/opine family amino ABC transporter [Eggerthella sp. 1_3_56FAA] Length = 458 Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 60/211 (28%), Positives = 110/211 (52%), Gaps = 17/211 (8%) Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248 + + SF L I + L + + R + +AL YI+ ++ G P + I + + F Sbjct: 225 LVIVSFPLAIPIGLLWSFM-RMAKSRVPRALGATYIN--IVRGTPLFLQIYIAF---FGL 278 Query: 249 PVLG-QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307 P+LG + + F+ I L ++A++AEI R+G+ ++ GQ EAA +LG+ Sbjct: 279 PLLGIKMDL---------FVLGAIVLVLNSSAYLAEIFRAGIQSINGGQFEAARSLGMNG 329 Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367 + V++PQ +R +IP +TS+++ + K++SL AVG +++ TI TG I Sbjct: 330 AQTMFYVIIPQTVRRVIPTMTSEFILMYKDTSLLAAVGVMEIMMYAKTITAATGNVTPYI 389 Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 + F YL ++I + +N + ++A KK Sbjct: 390 VAAGF-YLIVTIPMTKLINSMEQRMAGGRKK 419 >gi|116334342|ref|YP_795869.1| ABC-type amino acid transport system, permease component [Lactobacillus brevis ATCC 367] gi|116099689|gb|ABJ64838.1| ABC-type amino acid transport system, permease component [Lactobacillus brevis ATCC 367] Length = 218 Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 56/182 (30%), Positives = 91/182 (50%), Gaps = 30/182 (16%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYI-ALSC 275 + LPL+ I F FGLP L V P+ + I A++ Sbjct: 65 RNLPLILILFFTYFGLPNL-------------------------GVKPDVIPAAILAMTI 99 Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335 + + +AEIVRSG+ AV GQME A A GLT+ +A ++LPQA+ +IP L SQ+++L+ Sbjct: 100 FESTMLAEIVRSGIQAVDPGQMEGARANGLTYWQALWYIVLPQALVKMIPALVSQFISLV 159 Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395 K++SLA + +++ I Q I I MF+ +++ I ++ + A+ K Sbjct: 160 KDTSLATIILLPEMLFRSQIIYGQNTNYI----IPMFVAIAVMYFIVCYLLSVLARYLEK 215 Query: 396 EK 397 + Sbjct: 216 RQ 217 >gi|187478451|ref|YP_786475.1| glutamine ABC transporter permease [Bordetella avium 197N] gi|115423037|emb|CAJ49568.1| glutamine ABC transporter, permease protein [Bordetella avium 197N] Length = 219 Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 66/218 (30%), Positives = 109/218 (50%), Gaps = 14/218 (6%) Query: 177 SFPTLTMDT--NAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234 + P L T KI + V G +L A ++R + + + +Y++ +I G P Sbjct: 11 ALPNLLEGTIMTVKITFWGLVGGFILGALAG-VARAYGPRAVAIIAQIYVA--IIRGTPI 67 Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294 +V + Y F P++ I G V E ++ + L + A+IAEIVR L++V R Sbjct: 68 VVQVMFIY---FALPLM-----IPGMRVEAESAAI-VTLMINSGAYIAEIVRGSLLSVAR 118 Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354 G EA A+GL K ++ P A R +IP L +Q + LK+SSL + +G A+L G Sbjct: 119 GLKEAGQAMGLPFWKILCHIIGPVAFRRMIPSLGNQCIISLKDSSLFIVIGVAELTRQGQ 178 Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 I+ +A+EI +YL L+ ++AL + L ++ Sbjct: 179 EIMASNFRAVEIWSAVAIVYLILTGLMALGLRLLEKRM 216 Score = 40.8 bits (94), Expect = 0.35, Method: Compositional matrix adjust. Identities = 35/133 (26%), Positives = 64/133 (48%), Gaps = 18/133 (13%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G + T + F G++ I+G L G R + VA I ++YV + R P +V + F+ Sbjct: 15 LLEGTIMTVKITFWGLVGGFILGALAGVARAYGPRAVAIIAQIYVAIIRGTPIVVQVMFI 74 Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS 208 Y ++ ++P GM + + TL +++ A ++ V G +LS ++ Sbjct: 75 YFALPLMIP----------GMRVEAESAAIVTLMINSGA--YIAEIVRGSLLS-----VA 117 Query: 209 RHFHEKTGKALPL 221 R E G+A+ L Sbjct: 118 RGLKE-AGQAMGL 129 >gi|291619610|ref|YP_003522352.1| YckA [Pantoea ananatis LMG 20103] gi|291154640|gb|ADD79224.1| YckA [Pantoea ananatis LMG 20103] Length = 216 Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 38/117 (32%), Positives = 67/117 (57%), Gaps = 1/117 (0%) Query: 275 CYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNL 334 C++ F+AEI RSG+ +V RGQ+EAA ++G++ KA R V+LPQA +PP ++ + + Sbjct: 96 CFST-FLAEIFRSGIESVDRGQLEAARSMGMSFFKAMRRVILPQAFHVALPPYSNTLVMM 154 Query: 335 LKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 LK+S+LA + ++ G + T + + +YL+L + + F L + Sbjct: 155 LKDSALASTIAVTEMTRQGQLLAASTFDNTTVYTLVALLYLTLCMPLLAFTKHLENR 211 >gi|257470563|ref|ZP_05634653.1| amino acid ABC transporter permease [Fusobacterium ulcerans ATCC 49185] gi|317064769|ref|ZP_07929254.1| amino acid ABC transporter [Fusobacterium ulcerans ATCC 49185] gi|313690445|gb|EFS27280.1| amino acid ABC transporter [Fusobacterium ulcerans ATCC 49185] Length = 208 Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 55/212 (25%), Positives = 113/212 (53%), Gaps = 19/212 (8%) Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240 LT++ +FS LGI+LSL R+S++ ++ + T++ G P L+ + Sbjct: 14 LTVNLYVVTMLFSLPLGILLSL--GRVSKNTTLSN-----MIQVYTWVFRGTPLLLQL-- 64 Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300 + +++ PV+G T++P F + + A+ EI R ++ + GQ EAA Sbjct: 65 -FFVYYGLPVVG-------ITLTP-FAAASLTFVINYTAYFCEIFRGSILGIDPGQYEAA 115 Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 LG+ + + +++PQA+ + +PPL+++ ++L+K++SL A+G A+++ ++ + Sbjct: 116 KVLGMKYWQTMIRIIIPQALITALPPLSNEAISLIKDTSLVSAIGMAEILRNSRELVTR- 174 Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 +I I +YL LS ++ +F R+ K+ Sbjct: 175 DFSITPFFICAVVYLGLSTIVVIFFKRMEKKV 206 >gi|255023478|ref|ZP_05295464.1| L-cystine transport system permease protein TcyM [Listeria monocytogenes FSL J1-208] Length = 235 Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 65/208 (31%), Positives = 103/208 (49%), Gaps = 15/208 (7%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 +F F++ I L+L R +H + + + Y+S F P ++ I L Y P+ Sbjct: 31 LFGFIIAIGLTLI-----RMYHVRFLEPIAKFYVSFFR--STPAILHIMLIY---LGIPL 80 Query: 251 LGQF---NFIGGSTVS--PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305 L F +F G T + P + + IALS A++ EI+RSG++AV GQMEAA ++G Sbjct: 81 LVDFLSKSFGLGITANKIPVVVFVIIALSFTAGAYLTEILRSGIMAVDIGQMEAAYSVGY 140 Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365 TH +A R VLLPQA +P T+ + L +S+A V ++ + + + +E Sbjct: 141 THGQAIRKVLLPQAFMIALPNFTNLCIGFLHTTSIAAIVAVPEITGMATIVASDNYAFLE 200 Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIA 393 + IY L+I+I L IA Sbjct: 201 AFIGAALIYWFLTILIEAINYILEKNIA 228 >gi|226366163|ref|YP_002783946.1| glutamate ABC transporter permease protein [Rhodococcus opacus B4] gi|226244653|dbj|BAH55001.1| glutamate ABC transporter permease protein [Rhodococcus opacus B4] Length = 226 Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 36/78 (46%), Positives = 52/78 (66%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + LS YTAAF+ E +RSG+ V GQ EA +LGLT + RL++LPQA R++ PL S Sbjct: 101 LGLSIYTAAFVCESLRSGINTVHVGQAEAGRSLGLTFSQNLRLIVLPQAFRAVTAPLGSV 160 Query: 331 YLNLLKNSSLAVAVGFAD 348 + L KN+++A +G A+ Sbjct: 161 LIALTKNTTIASVIGVAE 178 >gi|78186898|ref|YP_374941.1| amino acid ABC transporter permease [Chlorobium luteolum DSM 273] gi|78166800|gb|ABB23898.1| amino acid ABC transporter substrate-binding protein, PAAT family / amino acid ABC transporter membrane protein, PAAT family [Chlorobium luteolum DSM 273] Length = 990 Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 64/212 (30%), Positives = 109/212 (51%), Gaps = 19/212 (8%) Query: 189 IFVFSFVLGIVLS--LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246 I V S + G VL + A R+S KT K L ++IS L+ G P LVL+ L + + F Sbjct: 791 ISVLSALFGTVLGAGVCAMRMS---SAKTLKTLASVFIS--LLRGTPVLVLLMLIFYVVF 845 Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306 ++ P +++ IA AA++AEI RSG+ ++ GQ EA I++G T Sbjct: 846 -----------ASVSIDPVAVAV-IAFGLNFAAYVAEIFRSGVESIDNGQREAGISMGFT 893 Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 + L++LPQ ++ I+P ++L+L+K +S+ + DL G I ++T A Sbjct: 894 RLRTFLLIILPQTIQRILPVYKGEFLSLVKMTSIVGYIAVEDLTKAGDIIRSRTFDAFFP 953 Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 +++ +Y S+S ++ M L + K K+ Sbjct: 954 LIMVAILYFSISWLLLQSMAYLERRTDPKFKR 985 >gi|308126407|ref|ZP_07663749.1| general L-amino acid transport system permease protein AapM [Vibrio parahaemolyticus AQ4037] gi|308108538|gb|EFO46078.1| general L-amino acid transport system permease protein AapM [Vibrio parahaemolyticus AQ4037] Length = 118 Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 31/70 (44%), Positives = 51/70 (72%) Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343 +VR GL A+P+GQ EAA ALGL++ K T L++LPQA++ IP + + ++ L K++SL + Sbjct: 1 MVRGGLQAIPKGQYEAADALGLSYWKKTGLIILPQALKITIPSIVNTFIGLFKDTSLVLI 60 Query: 344 VGFADLVSVG 353 +G D++ +G Sbjct: 61 IGMFDVLGIG 70 >gi|301155428|emb|CBW14894.1| predicted transporter subunit: membrane component of ABC superfamily [Haemophilus parainfluenzae T3T1] Length = 238 Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 42/131 (32%), Positives = 76/131 (58%), Gaps = 6/131 (4%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + IA S A+ AE VR+ ++A+P+GQ EA+ A+G+ + +A ++PQA+R +P Sbjct: 108 FPTAIIAFSINIGAYAAETVRASILAIPKGQWEASYAIGMNYTQAFVRTIMPQALRISVP 167 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW---MFIYLSLSIMIA 382 L++ +++ +K++SLA V A+L V N T + E ILI+ IY +++ Sbjct: 168 SLSNTFISTVKDTSLASLVWIAELFRVAQ---NITAENYEFILIYSEAALIYWVFCFVLS 224 Query: 383 LFMNRLNAKIA 393 + RL +++ Sbjct: 225 MGQTRLEKRLS 235 >gi|295107460|emb|CBL05003.1| amino acid ABC transporter membrane protein 2, PAAT family (TC 3.A.1.3.-) [Gordonibacter pamelaeae 7-10-1-b] Length = 220 Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 43/134 (32%), Positives = 77/134 (57%), Gaps = 8/134 (5%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P + +A + +T+A +AEIVR GL +VP GQ EAA + G + + L++LPQA+R++ Sbjct: 82 PPIGAAVLAFTLFTSASVAEIVRGGLASVPFGQYEAAKSQGFSTVQTYLLIILPQALRNM 141 Query: 324 IPPLTSQYLNLLKNSS-LAVAVGFADLVSVGGTIINQTGQAIEII-------LIWMFIYL 375 +P L SQ++ +K++S L A+ +L+ G ++N ++I LI+ + Sbjct: 142 VPALLSQFVTTIKDTSYLWGAMALQELMGRGMILMNSYNSTVQIFAIFGIMALIYFVVCF 201 Query: 376 SLSIMIALFMNRLN 389 +LS ++ + RL Sbjct: 202 TLSQIVRAYQRRLK 215 >gi|283768561|ref|ZP_06341473.1| ABC transporter, permease protein [Bulleidia extructa W1219] gi|283104953|gb|EFC06325.1| ABC transporter, permease protein [Bulleidia extructa W1219] Length = 224 Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 55/210 (26%), Positives = 101/210 (48%), Gaps = 22/210 (10%) Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252 SF G+++++ A + + K L+ I +LI G P LV + + + + PV+G Sbjct: 31 SFFFGLIIAVLAALVQ---YAKIPVVKKLVRIYVWLIRGTPLLVQLMI---IFYGLPVIG 84 Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312 S F++ + S A+++E +R L ++PRGQ EA +G+ + Sbjct: 85 --------IQSNPFVAATVGFSICEGAYMSEAIRGALESIPRGQSEAGYCVGMNFVQVMW 136 Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV----SVGGTIINQTGQAIEIIL 368 ++LPQA R+ P L++ ++L+K+SSLA + ++ G IE+ L Sbjct: 137 YIVLPQAFRTAFPALSNSLISLVKDSSLAANITVVEMFMTTQRFAGKFYTFMPLYIEVAL 196 Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 +YL +I F +R+ K++ E+K Sbjct: 197 ----VYLLFCTIITFFQSRIEKKLSRYERK 222 >gi|283455706|ref|YP_003360270.1| ABC transporter permease [Bifidobacterium dentium Bd1] gi|283102340|gb|ADB09446.1| Permease protein of ABC transporter system [Bifidobacterium dentium Bd1] Length = 443 Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 68/229 (29%), Positives = 113/229 (49%), Gaps = 23/229 (10%) Query: 170 FLNNRGLSFPTLTMDTNAKIF--VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF 227 FL S P L + +F V SF + ++L + A L R + + +Y++ F Sbjct: 230 FLGLAKQSLPALMIGLKNTLFITVISFAIALLLGV-AFGLMRVGENRVASGVSKVYVAIF 288 Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIA----LSCYTAAFIAE 283 G P LV + +F P L IG S ++++IA LS + A++AE Sbjct: 289 R--GTPILVW---AFFFYFGVPQL-----IGHS------VNIWIAGALTLSLNSGAYLAE 332 Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343 IVR + AV GQME A +LGL R++ V+LPQA + +P + +Q + ++K+SSL +A Sbjct: 333 IVRGAIQAVDPGQMEGARSLGLNRRQSMARVILPQASKIAMPSVINQLVIMIKDSSLLLA 392 Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 +GF +L+ + + E +L+ IY M+ N ++ K+ Sbjct: 393 IGFGELLYQAQQLYAANFRVTETLLLVGVIYFVAITMLTWLANIVDRKV 441 Score = 41.6 bits (96), Expect = 0.20, Method: Compositional matrix adjust. Identities = 20/62 (32%), Positives = 34/62 (54%) Query: 88 AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147 A+++G NT ++ A ++G G R+ N++ + + +VYV +FR P LV FF Sbjct: 240 ALMIGLKNTLFITVISFAIALLLGVAFGLMRVGENRVASGVSKVYVAIFRGTPILVWAFF 299 Query: 148 LY 149 Y Sbjct: 300 FY 301 >gi|323342023|ref|ZP_08082256.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Erysipelothrix rhusiopathiae ATCC 19414] gi|322464448|gb|EFY09641.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Erysipelothrix rhusiopathiae ATCC 19414] Length = 537 Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 39/122 (31%), Positives = 74/122 (60%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I +S T+A+++EI+R+G+ A+ +GQ EAA +LG+T + R V+LPQA+R+ IP + ++ Sbjct: 392 IIISINTSAYMSEIIRAGIQAIDKGQNEAARSLGMTEAQTLRYVILPQAIRNAIPAIGNE 451 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++ +K+SS+ + ++L G + + +E I IYL L+I +N + Sbjct: 452 FVVNIKDSSVLNVITVSELFFQGNRLTGIYYRQMEPFFIVSLIYLVLTICSTQILNMIEK 511 Query: 391 KI 392 ++ Sbjct: 512 RM 513 >gi|224282755|ref|ZP_03646077.1| permease protein of ABC transporter for glutamate [Bifidobacterium bifidum NCIMB 41171] gi|313139915|ref|ZP_07802108.1| permease protein of ABC transporter for glutamate [Bifidobacterium bifidum NCIMB 41171] gi|313132425|gb|EFR50042.1| permease protein of ABC transporter for glutamate [Bifidobacterium bifidum NCIMB 41171] Length = 225 Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 67/215 (31%), Positives = 101/215 (46%), Gaps = 27/215 (12%) Query: 191 VFSFVLGIVLSLF------ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244 +FS +LG+VL + + R + + K LPL I F++ G Sbjct: 29 LFSLILGVVLVMMRISPISSLRTVAGAYVELFKNLPLTIIMVFMVLG------------- 75 Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYI-ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 Q T + F L + LS YTAAF+ E +RSG+ VP GQ EAA AL Sbjct: 76 -----AYAQLKLTFSDTFATNFFWLSVTGLSLYTAAFVCESLRSGINTVPIGQAEAARAL 130 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN-SSLAVAVGFADLVSVGGTIIN-QTG 361 GL ++ ++LPQA R + PL + + LLKN + A A + S+ T+I Sbjct: 131 GLGFMQSATQIILPQAFRGSVAPLGNTLIALLKNSTVAAAASVATETSSLMSTMIEFHPD 190 Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 ++I LI+ F Y+ L I I + L+ K+A++ Sbjct: 191 VIVQIFLIFAFGYVILIIPIGMLTTYLSNKLAVRR 225 >gi|220909976|ref|YP_002485287.1| polar amino acid ABC transporter inner membrane subunit [Cyanothece sp. PCC 7425] gi|219866587|gb|ACL46926.1| polar amino acid ABC transporter, inner membrane subunit [Cyanothece sp. PCC 7425] Length = 283 Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 54/181 (29%), Positives = 91/181 (50%), Gaps = 19/181 (10%) Query: 231 GLPTLVLIAL--------KYQLHFDKPVLGQFNFI----GGSTVSPEFMSLY---IALSC 275 G PTLV + L QL FD L FN + S VSP F ++ + LS Sbjct: 101 GTPTLVQLLLWGFGIGTVMSQLGFDPRALA-FNLLTPLQSNSLVSPVFNFIFYGVLGLSF 159 Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335 A++ E+ R+G+ ++ RGQ EAA++LGL + ++LPQA+R IPP T+ ++ L+ Sbjct: 160 NYGAYLTEVFRAGIESISRGQTEAALSLGLDSVQTMGRIVLPQAIRLTIPPFTNNFITLI 219 Query: 336 KNSSLAVAVGFADLVSVGGTI---INQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 ++S+L +G +L V + + + + ++ YL+L ++ L K+ Sbjct: 220 QDSALLSTIGVTELQQVTSSFAYPLTNPNDKLFVFILGALFYLALCYPLSRLARYLERKL 279 Query: 393 A 393 A Sbjct: 280 A 280 >gi|307555365|gb|ADN48140.1| hypothetical amino-acid ABC transporter permease protein YhdY [Escherichia coli ABU 83972] Length = 367 Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 35/96 (36%), Positives = 60/96 (62%) Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315 F+ T + + + + + +A++AE+VR GL A+P+GQ EAA +L L + K LV+ Sbjct: 221 FMAEDTSIDKLIRALVGVILFQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQGLVI 280 Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 +PQA++ +IP L + + L K++SL + +G DL S Sbjct: 281 MPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFS 316 >gi|302671182|ref|YP_003831142.1| amino acid ABC transporter permease [Butyrivibrio proteoclasticus B316] gi|302395655|gb|ADL34560.1| amino acid ABC transporter permease protein [Butyrivibrio proteoclasticus B316] Length = 225 Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 45/135 (33%), Positives = 73/135 (54%), Gaps = 2/135 (1%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F S +A A+ AE+ RS ++A+P+GQMEAA +GL++ +A V+LPQ+ P Sbjct: 90 FPSAVLAFGLNLGAYNAEVFRSAILAIPKGQMEAAYMIGLSYPQAMIRVILPQSFPVAFP 149 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 L + ++LLK+++LA ++ DL + I +T + + L FIYL S + Sbjct: 150 NLFNNLISLLKDTALASSITVIDLFTTAQQIAARTYEPFALYLEAAFIYLIFSTALTWLQ 209 Query: 386 NRLNAKIALK--EKK 398 L K+ K +KK Sbjct: 210 RYLEQKLVWKSSDKK 224 >gi|225163909|ref|ZP_03726201.1| polar amino acid ABC transporter, inner membrane subunit [Opitutaceae bacterium TAV2] gi|224801486|gb|EEG19790.1| polar amino acid ABC transporter, inner membrane subunit [Opitutaceae bacterium TAV2] Length = 216 Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 37/133 (27%), Positives = 76/133 (57%), Gaps = 1/133 (0%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P+F + +A + AA+ AEI R+G+ ++ +GQ E A LG ++ + R ++LPQ ++ I Sbjct: 85 PDFPAAVVAFALNYAAYFAEIFRAGIQSIDKGQYEGARVLGFSYPQTMRRIVLPQMVKRI 144 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 +PP++++ + L+K++SL + DL+ I+ + I+ F YL +++++ Sbjct: 145 LPPMSNETITLVKDTSLIYVLALNDLLRAARGIVQRDFTTSPFIVAAAF-YLLMTLVLTW 203 Query: 384 FMNRLNAKIALKE 396 RL + A+ + Sbjct: 204 GFQRLEKRHAVYD 216 >gi|78186724|ref|YP_374767.1| amino acid ABC transporter permease [Chlorobium luteolum DSM 273] gi|78166626|gb|ABB23724.1| amino acid ABC transporter membrane protein, PAAT family / amino acid ABC transporter substrate-binding protein, PAAT family [Chlorobium luteolum DSM 273] Length = 990 Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 64/212 (30%), Positives = 109/212 (51%), Gaps = 19/212 (8%) Query: 189 IFVFSFVLGIVLS--LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246 I V S + G VL + A R+S KT K L ++IS L+ G P LVL+ L + + F Sbjct: 791 ISVLSALFGTVLGAGVCAMRMS---SAKTLKTLASVFIS--LLRGTPVLVLLMLIFYVVF 845 Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306 ++ P +++ IA AA++AEI RSG+ ++ GQ EA I++G T Sbjct: 846 -----------ASVSIDPVAVAV-IAFGLNFAAYVAEIFRSGVESIDNGQREAGISMGFT 893 Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 + L++LPQ ++ I+P ++L+L+K +S+ + DL G I ++T A Sbjct: 894 RLRTFLLIILPQTIQRILPVYKGEFLSLVKMTSIVGYIAVEDLTKAGDIIRSRTFDAFFP 953 Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 +++ +Y S+S ++ M L + K K+ Sbjct: 954 LIMVAILYFSISWLLLQSMAYLERRTDPKFKR 985 >gi|89099282|ref|ZP_01172160.1| YqiY [Bacillus sp. NRRL B-14911] gi|89086128|gb|EAR65251.1| YqiY [Bacillus sp. NRRL B-14911] Length = 219 Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 28/74 (37%), Positives = 57/74 (77%) Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 +AA+I+EI+R+G++AV +GQ EA++ALG+ +++ ++LPQA+++I+P L ++++ L K Sbjct: 100 SAAYISEIIRAGILAVDKGQREASMALGIPYKRMMWDIILPQALKNILPALMNEFITLTK 159 Query: 337 NSSLAVAVGFADLV 350 S++ +G D++ Sbjct: 160 ESAIVTTIGVMDIM 173 >gi|33595878|ref|NP_883521.1| putative inner membrane component of binding-protein-dependent transport system [Bordetella parapertussis 12822] gi|33600408|ref|NP_887968.1| putative inner membrane component of binding-protein-dependent transport system [Bordetella bronchiseptica RB50] gi|33565957|emb|CAE36507.1| putative inner membrane component of binding-protein-dependent transport system [Bordetella parapertussis] gi|33568007|emb|CAE31920.1| putative inner membrane component of binding-protein-dependent transport system [Bordetella bronchiseptica RB50] Length = 230 Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 62/206 (30%), Positives = 101/206 (49%), Gaps = 18/206 (8%) Query: 189 IFVFSFVLGIVLSLFAT--RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246 +F S VL + L L RLS+ G L YI +I G P L+ + + +++ Sbjct: 23 LFFCSAVLAVALGLLVCLCRLSKSRVLSRGARL---YID--IIRGTPLLLQL---FYIYY 74 Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306 P LG V F++ + L+ A++AE+ RSG+ +V GQ EAA ALGL Sbjct: 75 GMPELG--------VVINAFVAGVLGLTLNFGAYLAELFRSGIQSVDSGQYEAARALGLN 126 Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 R V+LPQA+R++ P L + L L+K +SL + +L+ G + T QA+ + Sbjct: 127 KVDRLRRVVLPQAVRTVFPALGNYALVLIKETSLVAVISVYELMRAGEMLAGATFQALTV 186 Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKI 392 + IY ++ ++A R ++ Sbjct: 187 YTMVGAIYFAMCSVLAHLFRRSEKRL 212 Score = 36.2 bits (82), Expect = 8.4, Method: Compositional matrix adjust. Identities = 20/65 (30%), Positives = 37/65 (56%) Query: 85 YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144 Y T + G + T L F + A +G LV RLS +++++ R+Y+++ R P L+ Sbjct: 9 YLTPLAEGTMWTLALFFCSAVLAVALGLLVCLCRLSKSRVLSRGARLYIDIIRGTPLLLQ 68 Query: 145 IFFLY 149 +F++Y Sbjct: 69 LFYIY 73 >gi|262155888|ref|ZP_06029010.1| amino acid ABC transporter permease protein [Vibrio cholerae INDRE 91/1] gi|262030340|gb|EEY48982.1| amino acid ABC transporter permease protein [Vibrio cholerae INDRE 91/1] Length = 188 Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 58/191 (30%), Positives = 98/191 (51%), Gaps = 16/191 (8%) Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLV-LIALKYQLHFDKPVLGQFNFIGGSTVSPEFM 267 R F L LYIS F G P LV L L Y L P+L + F Sbjct: 9 RVFKVPVLDPLSQLYISFFR--GTPLLVQLFLLYYGLPQVFPLLVGLD---------AFS 57 Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327 + I L+ + AA++AE +R+ +I + R QMEA++++G+T +A R ++LPQA R +P L Sbjct: 58 AAVIGLTLHFAAYMAESIRAAIIGIDRSQMEASLSVGMTTSQAMRRIILPQATRVALPSL 117 Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387 + +++++K++SLA +G A++++ + + + E L IY ++ L + R Sbjct: 118 MNYFIDMIKSTSLAFTLGVAEIMAKAQMEASSSFRFFEAFLAVALIYW----VVVLVLTR 173 Query: 388 LNAKIALKEKK 398 L + K K Sbjct: 174 LQSWAEQKLNK 184 >gi|227326270|ref|ZP_03830294.1| putative ABC transporter, permease [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 293 Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 40/135 (29%), Positives = 77/135 (57%), Gaps = 3/135 (2%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 +F + L+ +A+ AEI+R G++ V GQ EA+ ALGL + T ++LPQA+RSI+ Sbjct: 140 QFSVAVLGLTLVQSAYTAEIIRGGILGVDAGQFEASAALGLPGSRRTVRIILPQALRSIL 199 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL---IWMFIYLSLSIMI 381 P ++ ++L K +S+ + +L I N+T Q I +++ IW + ++ ++ Sbjct: 200 PTGFNEIISLAKGTSIVYVLALPELFYTVQVIYNRTQQVIPLLMVATIWYLLITTVLSVV 259 Query: 382 ALFMNRLNAKIALKE 396 ++ R ++ A++E Sbjct: 260 QYYVERYVSRGAVRE 274 >gi|163734791|ref|ZP_02142229.1| glutamate/aspartate ABC transporter, permease protein [Roseobacter litoralis Och 149] gi|161391896|gb|EDQ16227.1| glutamate/aspartate ABC transporter, permease protein [Roseobacter litoralis Och 149] Length = 218 Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 37/129 (28%), Positives = 72/129 (55%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 F S IA + AA+ +EI+R+G+ +V +GQ+ A + GL + + R V+LPQA R++I Sbjct: 89 SFYSALIAFVLFEAAYYSEIMRAGIQSVKQGQVHAGQSTGLNYWQIQRYVVLPQAFRNMI 148 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 P L +Q + L +++SL V D ++ + G+ +E+ L +Y + ++ Sbjct: 149 PILVTQCIILFQDTSLVFVVSLRDFMTASSIVARTEGRLVEMYLFAAVVYFVICFSGSML 208 Query: 385 MNRLNAKIA 393 + L ++++ Sbjct: 209 VRSLKSRMS 217 Score = 40.4 bits (93), Expect = 0.44, Method: Compositional matrix adjust. Identities = 20/58 (34%), Positives = 34/58 (58%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 G + WL F +I ++GTL+ RLS K +A + YV + R++P ++VIF+ + Sbjct: 19 GLQLSLWLTFLSIIGGIVLGTLLALARLSGIKPLAMVAATYVNLIRSVPLILVIFWFF 76 >gi|158423695|ref|YP_001524987.1| amino acid ABC transporter permease protein [Azorhizobium caulinodans ORS 571] gi|158330584|dbj|BAF88069.1| amino acid ABC transporter permease protein [Azorhizobium caulinodans ORS 571] Length = 225 Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 50/166 (30%), Positives = 86/166 (51%), Gaps = 11/166 (6%) Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287 L+ G+P LV++ + ++F P G I S + L + SCY I E R+ Sbjct: 68 LVRGVPILVIL---FYIYFVMPDFG----IDLSAFQAGVIGLALTYSCY----IGETFRA 116 Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347 G+ AV RGQ+EAA ++G+ R V+LPQA + ++PP + + LLK+SS + A Sbjct: 117 GIEAVDRGQVEAAKSIGMKRPLMMRRVILPQAFKIVLPPYGNNIVMLLKDSSQVSVISVA 176 Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393 +L G + + T + I + +YL L++ + + M +L ++ Sbjct: 177 ELTMQGKMLASSTFNNMTIFTLVALLYLCLTVPLNIVMRQLELRLG 222 >gi|119960817|ref|YP_948500.1| glutamate permease [Arthrobacter aurescens TC1] gi|119947676|gb|ABM06587.1| Glutamate permease [Arthrobacter aurescens TC1] Length = 289 Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 46/135 (34%), Positives = 78/135 (57%), Gaps = 4/135 (2%) Query: 216 GKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSC 275 G AL LL IS +PT V++ + PV+ F+ + +F ++ + L Sbjct: 87 GIALCLLRISLIPWIRIPTQVVLEFLRGM----PVVLMMLFVLLVFATGQFQAVVVGLVL 142 Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335 Y AA AEI+R+G+ ++P+GQ EA +A+GL ++ + PQA+R ++P L +Q + LL Sbjct: 143 YNAAIFAEILRAGIQSLPKGQREAGLAIGLRSFQSRMSIEFPQAVRRMLPSLVAQLVVLL 202 Query: 336 KNSSLAVAVGFADLV 350 K++SL VG+ +L+ Sbjct: 203 KDTSLGYIVGYEELL 217 >gi|295698937|ref|YP_003606830.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia sp. CCGE1002] gi|295438150|gb|ADG17319.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. CCGE1002] Length = 602 Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 42/129 (32%), Positives = 73/129 (56%), Gaps = 4/129 (3%) Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321 +SP F++ + L+ AAF AE++R G+ +V GQ+EAA ALGL + R ++LPQAMR Sbjct: 163 ISP-FLAAVLGLTLNHAAFSAEVIRGGIQSVDHGQLEAAAALGLPRERQARRIVLPQAMR 221 Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL---IWMFIYLSLS 378 +I+P + + L K SS+ + +L I + + I +++ +W I L++ Sbjct: 222 AIVPTAFNDLIALAKGSSMVYVLAMPELFYTVQIIYRRNLEVIPLLMVATVWYLIILTVL 281 Query: 379 IMIALFMNR 387 I +++ R Sbjct: 282 SAIQVYVER 290 >gi|259907962|ref|YP_002648318.1| Putative ABC transporter, permease [Erwinia pyrifoliae Ep1/96] gi|224963584|emb|CAX55076.1| Putative ABC transporter, permease [Erwinia pyrifoliae Ep1/96] Length = 289 Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 40/129 (31%), Positives = 74/129 (57%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 +F + I L+ AA+ AEIVR G+ V GQ EAA ALGL + T ++LPQA+R+II Sbjct: 136 QFSTAVIGLTLVQAAYTAEIVRGGIAGVDHGQFEAAAALGLPSSRRTLRIILPQALRAII 195 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 P ++ ++L K +++ + +L + N+T Q I ++++ YL ++ ++++ Sbjct: 196 PGAFNEIISLAKGTAMVYVLAMPELFYTIQMVYNRTQQVIPLLMVAAVWYLLITTLLSVV 255 Query: 385 MNRLNAKIA 393 + + +A Sbjct: 256 QHYVERWLA 264 >gi|222083300|ref|YP_002542703.1| ABC transporter membrane spanning protein (amino acid) [Agrobacterium vitis S4] gi|221738680|gb|ACM39518.1| ABC transporter membrane spanning protein (amino acid) [Agrobacterium vitis S4] Length = 235 Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 35/120 (29%), Positives = 73/120 (60%), Gaps = 7/120 (5%) Query: 237 LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296 L+ L + ++F P L + G F ++ + L+ + A++ EI+++G++++PRGQ Sbjct: 73 LVMLIFWVYFLLPKLTGYAITG-------FTTMLVTLTLFQGAYMGEILKAGIMSLPRGQ 125 Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356 +EAA ++GL++ +A V+LPQ + ++ P + SQ + +K++SL +G +L+ G + Sbjct: 126 IEAARSIGLSYSQAQTDVILPQVLYNMAPSIISQLVATIKDTSLGYIIGVQELMYAGSQV 185 >gi|171743321|ref|ZP_02919128.1| hypothetical protein BIFDEN_02452 [Bifidobacterium dentium ATCC 27678] gi|306823266|ref|ZP_07456642.1| glutamate ABC superfamily ATP binding cassette transporter, membrane protein [Bifidobacterium dentium ATCC 27679] gi|309801894|ref|ZP_07696009.1| ABC transporter, permease protein [Bifidobacterium dentium JCVIHMP022] gi|171278935|gb|EDT46596.1| hypothetical protein BIFDEN_02452 [Bifidobacterium dentium ATCC 27678] gi|304553898|gb|EFM41809.1| glutamate ABC superfamily ATP binding cassette transporter, membrane protein [Bifidobacterium dentium ATCC 27679] gi|308221450|gb|EFO77747.1| ABC transporter, permease protein [Bifidobacterium dentium JCVIHMP022] Length = 514 Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 68/229 (29%), Positives = 113/229 (49%), Gaps = 23/229 (10%) Query: 170 FLNNRGLSFPTLTMDTNAKIF--VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF 227 FL S P L + +F V SF + ++L + A L R + + +Y++ F Sbjct: 301 FLGLAKQSLPALMIGLKNTLFITVISFAIALLLGV-AFGLMRVGENRVASGVSKVYVAIF 359 Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIA----LSCYTAAFIAE 283 G P LV + +F P L IG S ++++IA LS + A++AE Sbjct: 360 R--GTPILVW---AFFFYFGVPQL-----IGHS------VNIWIAGALTLSLNSGAYLAE 403 Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343 IVR + AV GQME A +LGL R++ V+LPQA + +P + +Q + ++K+SSL +A Sbjct: 404 IVRGAIQAVDPGQMEGARSLGLNRRQSMARVILPQASKIAMPSVINQLVIMIKDSSLLLA 463 Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 +GF +L+ + + E +L+ IY M+ N ++ K+ Sbjct: 464 IGFGELLYQAQQLYAANFRVTETLLLVGVIYFVAITMLTWLANIVDRKV 512 Score = 41.6 bits (96), Expect = 0.23, Method: Compositional matrix adjust. Identities = 20/62 (32%), Positives = 34/62 (54%) Query: 88 AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147 A+++G NT ++ A ++G G R+ N++ + + +VYV +FR P LV FF Sbjct: 311 ALMIGLKNTLFITVISFAIALLLGVAFGLMRVGENRVASGVSKVYVAIFRGTPILVWAFF 370 Query: 148 LY 149 Y Sbjct: 371 FY 372 >gi|319792873|ref|YP_004154513.1| polar amino acid ABC transporter, inner membrane subunit [Variovorax paradoxus EPS] gi|315595336|gb|ADU36402.1| polar amino acid ABC transporter, inner membrane subunit [Variovorax paradoxus EPS] Length = 217 Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 64/212 (30%), Positives = 105/212 (49%), Gaps = 18/212 (8%) Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALK 241 T+ +A FV +LG++++L T S + +++I F G P L+ + L Sbjct: 19 TLALSAIAFVGGAILGLIIALMRTSDSTWARNAS-----MVFIQVFQ--GTPLLLQLFLI 71 Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301 F PVLG ++P +++ +AL +AAF+ EI R + A+PRGQ EAA Sbjct: 72 ---FFGAPVLGL-------DINP-WIAAGVALILNSAAFLGEIWRGCIEAIPRGQWEAAE 120 Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361 AL L + R V+LPQA + + P + ++K +SLA +GF ++ G I N T Sbjct: 121 ALSLKYGARMRDVVLPQAFKIALAPTVGYLVQIIKGTSLAAIIGFTEITRAGQIINNATF 180 Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393 Q + + + IY + ++L R+ K A Sbjct: 181 QPLIVFSVVAAIYFVICWPLSLLAARMERKRA 212 >gi|284802788|ref|YP_003414653.1| hypothetical protein LM5578_2545 [Listeria monocytogenes 08-5578] gi|284995930|ref|YP_003417698.1| hypothetical protein LM5923_2495 [Listeria monocytogenes 08-5923] gi|293596749|ref|ZP_05264035.2| amino acid ABC transporter [Listeria monocytogenes J2818] gi|284058350|gb|ADB69291.1| hypothetical protein LM5578_2545 [Listeria monocytogenes 08-5578] gi|284061397|gb|ADB72336.1| hypothetical protein LM5923_2495 [Listeria monocytogenes 08-5923] gi|293592041|gb|EFG00376.1| amino acid ABC transporter [Listeria monocytogenes J2818] Length = 236 Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 65/208 (31%), Positives = 103/208 (49%), Gaps = 15/208 (7%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 +F F++ I L+L R +H + + + Y+S F P ++ I L Y P+ Sbjct: 32 LFGFIIAIGLTLI-----RMYHVRFLEPIAKFYVSFFR--STPAILHIMLIY---LGIPL 81 Query: 251 LGQF---NFIGGSTVS--PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305 L F +F G + + P + + IALS A++ EI+RSG+IAV GQMEAA ++G Sbjct: 82 LVDFLSKSFGLGISANKIPVVVFVIIALSFTAGAYLTEILRSGIIAVDIGQMEAAYSVGY 141 Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365 TH +A R VLLPQA +P T+ + L +S+A V ++ + + + +E Sbjct: 142 THGQAIRKVLLPQAFMIALPNFTNLCIGFLHTTSIAAIVAVPEITGMATIVASDNYAFLE 201 Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIA 393 + IY L+I+I L IA Sbjct: 202 AFIGAALIYWFLTILIEAINYILEKNIA 229 >gi|253688538|ref|YP_003017728.1| polar amino acid ABC transporter, inner membrane subunit [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251755116|gb|ACT13192.1| polar amino acid ABC transporter, inner membrane subunit [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 314 Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 63/214 (29%), Positives = 109/214 (50%), Gaps = 14/214 (6%) Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251 FS V G L+L RLS + T L LYI F L +++I + +D+ L Sbjct: 87 FSIVFGTALAL--ARLSPSYLLST---LSWLYIWLFRSLPLILVLIILYNFSYLYDELAL 141 Query: 252 G----QFNFIGGSTVS--PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305 G F+ T+ +F + L+ +A+ AEI+R G++ V GQ EA+ ALGL Sbjct: 142 GIPFTSVVFLRYPTIDLLDQFSVAVLGLTLVQSAYTAEIIRGGILGVDAGQFEASAALGL 201 Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365 + T ++LPQA+RSI+P ++ ++L K +S+ + +L I N+T Q I Sbjct: 202 PGGRRTVRIILPQALRSILPTGFNEIISLAKGTSIVYVLALPELFYTVQVIYNRTQQVIP 261 Query: 366 IIL---IWMFIYLSLSIMIALFMNRLNAKIALKE 396 +++ IW + ++ +I ++ R ++ A++E Sbjct: 262 LLMVATIWYLLITTVLSVIQYYVERYVSRGAVRE 295 >gi|239928549|ref|ZP_04685502.1| glutamate permease [Streptomyces ghanaensis ATCC 14672] gi|291436874|ref|ZP_06576264.1| glutamate permease [Streptomyces ghanaensis ATCC 14672] gi|291339769|gb|EFE66725.1| glutamate permease [Streptomyces ghanaensis ATCC 14672] Length = 221 Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 46/126 (36%), Positives = 76/126 (60%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + L YT+AF+ E +RSG+ VP GQ EAA A+GL+ + LV+LPQA RS + PL + Sbjct: 96 LGLILYTSAFVCEAIRSGINTVPVGQAEAARAIGLSFNQVLGLVVLPQAFRSSVGPLANV 155 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 + L+KN+++A A+G A+ + +I Q + I + F ++ L++ LF+ + Sbjct: 156 LIALIKNTTVAAAIGVAEAALLMKEMIENEAQLLLISAVIAFGFVVLTLPTGLFLGWVGK 215 Query: 391 KIALKE 396 K+A+K Sbjct: 216 KVAVKR 221 >gi|218507341|ref|ZP_03505219.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium etli Brasil 5] Length = 157 Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 41/128 (32%), Positives = 74/128 (57%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 ++++ ++ + +A++ EI RS ++A+P+GQ EAA ALGL +R V+LPQA+R +P Sbjct: 27 WIAVAAGVTLHASAYLGEIWRSTIMALPKGQDEAAKALGLGYRTRIIYVILPQALRISLP 86 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 + L+K +SLA +GF +L G + N T Q + + + +Y +L ++ F Sbjct: 87 STVGFLVQLVKGTSLAAIIGFTELTRAGQIVSNATYQPLIVFGLVGALYFALCWPLSHFS 146 Query: 386 NRLNAKIA 393 +L + A Sbjct: 147 FQLEKRFA 154 >gi|126731769|ref|ZP_01747573.1| probable ABC transporter permease protein [Sagittula stellata E-37] gi|126707596|gb|EBA06658.1| probable ABC transporter permease protein [Sagittula stellata E-37] Length = 364 Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 30/95 (31%), Positives = 60/95 (63%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 + + + + ++ + A + AE++R GL A+P GQ EAA +L LT+ + TR ++LPQA+R + Sbjct: 229 KLLRITVGIAVFFACYQAEVIRGGLQAIPTGQYEAADSLNLTYWQTTRRIILPQALRISL 288 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359 P +T+ + +KN+S + +G D+++ ++ Sbjct: 289 PAITNHIIAAMKNTSFVIIIGLFDILTATTAVMQD 323 >gi|308188313|ref|YP_003932444.1| Inner membrane amino-acid ABC transporter permease protein yhdY [Pantoea vagans C9-1] gi|308058823|gb|ADO10995.1| Inner membrane amino-acid ABC transporter permease protein yhdY [Pantoea vagans C9-1] Length = 366 Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 36/96 (37%), Positives = 59/96 (61%) Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315 F+ T + + + + + +A++AE+VR GL A+P+GQ EAA +L L + K LV+ Sbjct: 220 FMSEGTTIDKLVRALVGVILFQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQMLVI 279 Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 LPQA++ IP L + + L K++SL + +G DL S Sbjct: 280 LPQALKLTIPGLVNTIIALFKDTSLVIIIGLFDLFS 315 >gi|307729487|ref|YP_003906711.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia sp. CCGE1003] gi|307584022|gb|ADN57420.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. CCGE1003] Length = 219 Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 57/207 (27%), Positives = 103/207 (49%), Gaps = 18/207 (8%) Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251 F + G VL+L H +T L +Y+S ++ G P LV I + +++ P Sbjct: 31 FGLIAGAVLALMGVS-----HSRTLNRLARIYVS--VMRGTPLLVQI---FVIYYGLPSF 80 Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311 G ++ P + IALS AA+++E +R ++ + +GQ AA +LGL+ R+ Sbjct: 81 G-------ISLEPTPAGV-IALSANVAAYLSESMRGAILGIHQGQWLAAYSLGLSRRQTL 132 Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371 R V+ PQA+R +P L++ ++L+K++SL + +L+ II T Q + + L Sbjct: 133 RYVIAPQALRIAVPSLSNSLISLIKDTSLVSVITVTELLRSAQEIIASTYQPLPLYLAAA 192 Query: 372 FIYLSLSIMIALFMNRLNAKIALKEKK 398 +Y L ++ L ++AL + Sbjct: 193 AVYWVLCQILELLQRWYERRLALPSRH 219 >gi|251791417|ref|YP_003006138.1| polar amino acid ABC transporter inner membrane subunit [Dickeya zeae Ech1591] gi|247540038|gb|ACT08659.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya zeae Ech1591] Length = 364 Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 33/76 (43%), Positives = 53/76 (69%) Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335 + +A++AE+VR GL A+P+GQ EAA +L L + + LV+LPQA++ +IP L + + L Sbjct: 238 FQSAYVAEVVRGGLQALPKGQYEAAQSLALGYWRMQGLVILPQALKMVIPGLVNTIIALF 297 Query: 336 KNSSLAVAVGFADLVS 351 K++SL + +G DL S Sbjct: 298 KDTSLVIIIGLFDLFS 313 >gi|256824980|ref|YP_003148940.1| amino acid ABC transporter membrane protein [Kytococcus sedentarius DSM 20547] gi|256688373|gb|ACV06175.1| amino acid ABC transporter membrane protein [Kytococcus sedentarius DSM 20547] Length = 245 Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 64/215 (29%), Positives = 105/215 (48%), Gaps = 31/215 (14%) Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF---LIFGLPTLVLIALKYQLHF 246 F FVL +VL L K P + +T L GLP L++I + F Sbjct: 46 FTGGFVLAVVLVLM----------KLAPVAPFRWFATAYIELFRGLPALLVILF---MGF 92 Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306 P+ + GG TV + L + Y +AE +R+G+ AVP GQ+EAA +LG+T Sbjct: 93 GIPIATGWTPPGG-TVGAGLVGLMLVAGAY----MAETLRAGIQAVPSGQVEAARSLGMT 147 Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF----ADLVSVGGTIIN---Q 359 + V PQA+R ++PPLT++ + L+K++SL +GF +L + +N Sbjct: 148 PAQTMASVTFPQALRIVVPPLTNELVILIKDTSLLFVLGFMTHQKELTTAARDFMNAGPS 207 Query: 360 TGQAIEII---LIWMFIYLSLSIMIALFMNRLNAK 391 G + ++ L+++ I L L+ ++A R N + Sbjct: 208 AGTSTSLVFAALLYLAITLPLTQVVAWLERRQNRR 242 >gi|254523655|ref|ZP_05135710.1| ABC transporter, nucleotide binding/ATPase protein [Stenotrophomonas sp. SKA14] gi|219721246|gb|EED39771.1| ABC transporter, nucleotide binding/ATPase protein [Stenotrophomonas sp. SKA14] Length = 581 Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 39/128 (30%), Positives = 71/128 (55%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + + L+ AAF AE++R G+++V GQ EAA ALGL + R ++LPQAMRSI+P Sbjct: 161 FTAAVLGLTLNQAAFSAEVIRGGILSVDHGQYEAAAALGLPRGRQVRRIILPQAMRSILP 220 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 + + L K++S+ + +L I + + + ++++ YL + +++L Sbjct: 221 AAFNDVIGLAKSTSVVYVLALPELFYTVQVIYRRNLEVVPLLMVATVWYLVILTVLSLLQ 280 Query: 386 NRLNAKIA 393 R+ + A Sbjct: 281 RRVEQRFA 288 >gi|70726105|ref|YP_253019.1| hypothetical protein SH1104 [Staphylococcus haemolyticus JCSC1435] gi|68446829|dbj|BAE04413.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435] Length = 484 Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 49/130 (37%), Positives = 75/130 (57%), Gaps = 16/130 (12%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IAL ++A+IAEI+R+G+ AV +GQ EAA LGL + K ++LPQA ++I+P L ++ Sbjct: 359 IALVINSSAYIAEIIRAGINAVDKGQTEAAQCLGLNYSKTMIHIILPQAFKNILPALGNE 418 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIIN-QTGQAIE-------IILIWMFIYLS--LSIM 380 ++ L+K SS+ +G VG + N Q Q I II M+ L+ LS + Sbjct: 419 FVTLIKESSIISTIG------VGEIMFNAQVVQGISFDPFTPLIIAACMYFVLTFLLSRL 472 Query: 381 IALFMNRLNA 390 ++L RL A Sbjct: 473 MSLIEGRLKA 482 Score = 42.7 bits (99), Expect = 0.098, Method: Compositional matrix adjust. Identities = 20/67 (29%), Positives = 35/67 (52%) Query: 83 SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142 Y T L G NT ++ G++ IIG+ + +LS K+++ +Y+E R P L Sbjct: 274 QKYGTFFLKGLQNTIIISLIGVVCGAIIGSFIALAKLSKFKIISLPATIYIEFLRGTPML 333 Query: 143 VVIFFLY 149 V +F ++ Sbjct: 334 VQVFIVF 340 >gi|113475661|ref|YP_721722.1| polar amino acid ABC transporter inner membrane subunit [Trichodesmium erythraeum IMS101] gi|110166709|gb|ABG51249.1| polar amino acid ABC transporter, inner membrane subunit [Trichodesmium erythraeum IMS101] Length = 403 Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 35/89 (39%), Positives = 60/89 (67%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + L+ ++AA++AE VR GL +V RGQ EAA ALGL + L++LPQA++ IP + Q Sbjct: 275 LGLTLFSAAYLAENVRGGLQSVLRGQSEAAKALGLNTPLSLGLIVLPQALKVAIPSIVGQ 334 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQ 359 +++L ++++L VG +L+ + +I+ Q Sbjct: 335 FISLFQDTTLLSIVGLVELLGISRSILAQ 363 >gi|289168138|ref|YP_003446407.1| ABC transporter membrane-spanning permease-amino acid transport [Streptococcus mitis B6] gi|288907705|emb|CBJ22542.1| ABC transporter membrane-spanning permease-amino acid transport [Streptococcus mitis B6] Length = 213 Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 54/198 (27%), Positives = 97/198 (48%), Gaps = 23/198 (11%) Query: 215 TGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF----IGGSTVSPEFMSLY 270 +G ++ L + LIF +P VLIA Q+H+ KP+ N + G+ + + + +Y Sbjct: 13 SGASMTLQVFALVLIFSIPLGVLIAFALQVHW-KPLHHLINIYIWIMRGTPLLLQLIFIY 71 Query: 271 -----------------IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313 IA AA+ AEI R G+ +P+GQ EAA L R Sbjct: 72 YVLPSIGIRLDRLPAAIIAFVLNYAAYFAEIFRGGIDTIPKGQYEAAKVLKFNSFDTVRY 131 Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI 373 ++LPQ + ++P + ++ ++L+K++SL A+G +DL+ T N+ + + L+ I Sbjct: 132 IILPQVTKIVLPSVFNEVMSLVKDTSLVYALGISDLILASRTAANRDASLVPMFLVGA-I 190 Query: 374 YLSLSIMIALFMNRLNAK 391 YL L ++ + ++ K Sbjct: 191 YLILIGIVTILAKKVEKK 208 >gi|254391811|ref|ZP_05007006.1| glutamate transporter permease [Streptomyces clavuligerus ATCC 27064] gi|294815491|ref|ZP_06774134.1| Glutamate transporter permease [Streptomyces clavuligerus ATCC 27064] gi|326443842|ref|ZP_08218576.1| glutamate transporter permease [Streptomyces clavuligerus ATCC 27064] gi|197705493|gb|EDY51305.1| glutamate transporter permease [Streptomyces clavuligerus ATCC 27064] gi|294328090|gb|EFG09733.1| Glutamate transporter permease [Streptomyces clavuligerus ATCC 27064] Length = 224 Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 34/78 (43%), Positives = 51/78 (65%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + L YT F+ E +RSG+ VP GQ EAA ALGL+ + L++LPQA RS++ PL + Sbjct: 98 LGLVAYTGTFVCEALRSGINTVPVGQAEAARALGLSFLQVLTLIILPQAFRSVVAPLANV 157 Query: 331 YLNLLKNSSLAVAVGFAD 348 + L KN+++A A+G + Sbjct: 158 LIALTKNTTVAAAIGVTE 175 >gi|313607195|gb|EFR83666.1| L-cystine transport system permease protein TcyM [Listeria monocytogenes FSL F2-208] Length = 235 Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 65/208 (31%), Positives = 103/208 (49%), Gaps = 15/208 (7%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 +F F++ I L+L R +H + + + Y+S F P ++ I L Y P+ Sbjct: 31 LFGFIIAIGLTLI-----RMYHVRFLEPIAKFYVSFFR--STPAILHIMLIY---LGIPL 80 Query: 251 LGQF---NFIGGSTVS--PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305 L F +F G + + P + + IALS A++ EI+RSG+IAV GQMEAA ++G Sbjct: 81 LVDFLSKSFGLGISANKIPVVVFVIIALSFTAGAYLTEILRSGIIAVDIGQMEAAYSVGY 140 Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365 TH +A R VLLPQA +P T+ + L +S+A V ++ + + + +E Sbjct: 141 THGQAIRKVLLPQAFMIALPNFTNLCIGFLHTTSIAAIVAVPEITGMATIVASDNYAFLE 200 Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIA 393 + IY L+I+I L IA Sbjct: 201 AFIGAALIYWFLTILIEAINYILEKNIA 228 >gi|271498818|ref|YP_003331843.1| polar amino acid ABC transporter inner membrane subunit [Dickeya dadantii Ech586] gi|270342373|gb|ACZ75138.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya dadantii Ech586] Length = 362 Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 33/76 (43%), Positives = 53/76 (69%) Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335 + +A++AE+VR GL A+P+GQ EAA +L L + + LV+LPQA++ +IP L + + L Sbjct: 236 FQSAYVAEVVRGGLQALPKGQYEAAQSLALGYWRMQGLVILPQALKMVIPGLVNTIIALF 295 Query: 336 KNSSLAVAVGFADLVS 351 K++SL + +G DL S Sbjct: 296 KDTSLVIIIGLFDLFS 311 >gi|255027829|ref|ZP_05299815.1| hypothetical protein LmonocytFSL_18331 [Listeria monocytogenes FSL J2-003] Length = 235 Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 65/208 (31%), Positives = 102/208 (49%), Gaps = 15/208 (7%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 +F F++ I L+L R +H + + + Y+S F P ++ I L Y P+ Sbjct: 31 LFGFIIAIGLTLI-----RMYHVRFLEPIAKFYVSFFR--STPAILHIMLIY---LGIPL 80 Query: 251 LGQF---NFIGGSTVS--PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305 L F +F G + P + + IALS A++ EI+RSG+IAV GQMEAA ++G Sbjct: 81 LVDFLSKSFGLGVXANKIPVVVFVIIALSFTAGAYLTEILRSGIIAVDIGQMEAAYSVGY 140 Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365 TH +A R VLLPQA +P T+ + L +S+A V ++ + + + +E Sbjct: 141 THGQAIRKVLLPQAFMIALPNFTNLCIGFLHTTSIAAIVAVPEITGMATIVASDNYAFLE 200 Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIA 393 + IY L+I+I L IA Sbjct: 201 AFIGAALIYWFLTILIEAINYILEKNIA 228 >gi|119387647|ref|YP_918681.1| polar amino acid ABC transporter, inner membrane subunit [Paracoccus denitrificans PD1222] gi|119378222|gb|ABL72985.1| amino acid ABC transporter membrane protein 2, PAAT family [Paracoccus denitrificans PD1222] Length = 214 Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 60/212 (28%), Positives = 104/212 (49%), Gaps = 14/212 (6%) Query: 186 NAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH 245 A + + +FVLG + L + R + + + YI ++ G P LV++ L + Sbjct: 17 TAGLSLIAFVLGGAVGLLIAVM-RVSANRVLRGIAFTYIQ--IVQGTPLLVMMMLAF--- 70 Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305 F +LG F+ ++P F + A+ Y++A+ EI R G++AVP+ Q EAA L L Sbjct: 71 FGLSILG-FD------LTP-FAAASFAMVIYSSAYFGEIWRGGILAVPKTQWEAAECLAL 122 Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365 + LV++PQ +R PP + ++KN+SLA +G A+L I N T Q Sbjct: 123 HPVQRFWLVIIPQGLRISTPPTVGFMVQIVKNTSLASVIGVAELTYTSKLINNSTFQPFI 182 Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 I + +Y + +A + +L K+ + + Sbjct: 183 IFSVVAVLYFCMCYPLAWWSRKLEDKLNVAHR 214 >gi|167568073|ref|ZP_02360989.1| ABC polar amino acid transporter, inner membrane subunit [Burkholderia oklahomensis EO147] gi|167574432|ref|ZP_02367306.1| ABC polar amino acid transporter, inner membrane subunit [Burkholderia oklahomensis C6786] Length = 220 Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 65/218 (29%), Positives = 110/218 (50%), Gaps = 18/218 (8%) Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240 +T++ FV S VLG+ L+L +R + + I GLP +V + Sbjct: 21 VTVEITLCAFVLSSVLGLGLALMRVSSNRALSHAAAAVVNV-------IRGLPIIVQL-- 71 Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300 + ++F P LG + S F+ L IA S Y A E R+G+ A+ RGQ+EAA Sbjct: 72 -FYIYFVLPDLG----VQLSAFQAGFIGLGIAYSAYQA----ENFRAGIEAIDRGQIEAA 122 Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 ++G+ R V+LPQA R +PP + + +LK+SSLA + A++ G I + T Sbjct: 123 QSIGMRGAMIMRRVVLPQAFRIALPPYGNTLVMMLKDSSLASTITVAEMTRAGQLIASST 182 Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 Q + + + +YL+LS+ + + R+ ++ +K K+ Sbjct: 183 FQNMTVYTLVALLYLALSLPLVYGLRRIERRLGIKGKR 220 >gi|149203335|ref|ZP_01880305.1| glutamate/glutamine/aspartate/asparagine ABC transporter, permease protein [Roseovarius sp. TM1035] gi|149143168|gb|EDM31207.1| glutamate/glutamine/aspartate/asparagine ABC transporter, permease protein [Roseovarius sp. TM1035] Length = 429 Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 32/82 (39%), Positives = 58/82 (70%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I ++ +++A+IAE++R GL A+PRGQ EAA +LGL + +A +L++LPQA++ IP + + Sbjct: 299 IMITMFSSAYIAEVIRGGLAALPRGQYEAADSLGLDYAQAMQLIILPQALKISIPGIVNV 358 Query: 331 YLNLLKNSSLAVAVGFADLVSV 352 + L K+++L + D+V + Sbjct: 359 AVGLFKDTTLVSVISMFDIVGM 380 >gi|28378896|ref|NP_785788.1| glutamine ABC transporter, permease protein [Lactobacillus plantarum WCFS1] gi|254557101|ref|YP_003063518.1| glutamine ABC transporter, permease protein [Lactobacillus plantarum JDM1] gi|300769711|ref|ZP_07079594.1| glutamine ABC superfamily ATP binding cassette transporter, permease protein [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|308181097|ref|YP_003925225.1| glutamine ABC transporter, permease protein [Lactobacillus plantarum subsp. plantarum ST-III] gi|28271733|emb|CAD64639.1| glutamine ABC transporter, permease protein [Lactobacillus plantarum WCFS1] gi|254046028|gb|ACT62821.1| glutamine ABC transporter, permease protein [Lactobacillus plantarum JDM1] gi|300492754|gb|EFK27939.1| glutamine ABC superfamily ATP binding cassette transporter, permease protein [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|308046588|gb|ADN99131.1| glutamine ABC transporter, permease protein [Lactobacillus plantarum subsp. plantarum ST-III] Length = 213 Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 48/161 (29%), Positives = 86/161 (53%), Gaps = 12/161 (7%) Query: 240 LKYQLHF------DKPVLGQ--FNFIGGSTVSPEFMSLYIALSCYT---AAFIAEIVRSG 288 L++ LHF P+L Q F F G + F Y AL + AA+ AEI R G Sbjct: 47 LQWLLHFYVWLMRGTPLLLQLIFVFYGLPLIGIVFPRYYAALFAFILNYAAYFAEIFRGG 106 Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348 L ++ GQ E+A L L++ + R +++PQ ++ ++P + ++ +NL+K+SSL +G D Sbjct: 107 LQSIDNGQYESARVLRLSYWQTIRKIVIPQVIKIVLPSVGNEVINLVKDSSLVYVIGLGD 166 Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 L+ G + + ++L+ + IYL+L+ + + R+ Sbjct: 167 LLRAGNVATARDVTLVPLVLVGI-IYLALTAVTTFVLGRIE 206 >gi|307129009|ref|YP_003881025.1| membrane protein of an ABC superfamily putative amino-acid transporter [Dickeya dadantii 3937] gi|306526538|gb|ADM96468.1| membrane component of an ABC superfamily predicted amino-acid transporter [Dickeya dadantii 3937] Length = 364 Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 33/76 (43%), Positives = 53/76 (69%) Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335 + +A++AE+VR GL A+P+GQ EAA +L L + + LV+LPQA++ +IP L + + L Sbjct: 238 FQSAYVAEVVRGGLQALPKGQYEAAQSLALGYWRMQGLVILPQALKMVIPGLVNTIIALF 297 Query: 336 KNSSLAVAVGFADLVS 351 K++SL + +G DL S Sbjct: 298 KDTSLVIIIGLFDLFS 313 >gi|300313888|ref|YP_003777980.1| amino acid ABC transporter permease [Herbaspirillum seropedicae SmR1] gi|300076673|gb|ADJ66072.1| ABC-type amino acid transport system, permease component protein [Herbaspirillum seropedicae SmR1] Length = 217 Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 47/139 (33%), Positives = 73/139 (52%), Gaps = 11/139 (7%) Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290 G+P L+L+ + Y F V G V P ++ +A+ YT+A++ +I R + Sbjct: 62 GIPLLILLFIVY---FGLSVYG--------LVLPALVAAGLAMMIYTSAYLGDIWRGCVE 110 Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 A+PR Q EA+ L LT + RLV++PQA R +PP + L+K +SLA +GF +L Sbjct: 111 AMPRPQWEASECLSLTRWQTLRLVIIPQATRLSLPPTIGFLVQLIKMTSLASVIGFVELT 170 Query: 351 SVGGTIINQTGQAIEIILI 369 G I N Q + L+ Sbjct: 171 RAGQIINNSIFQPFLVFLL 189 >gi|255093160|ref|ZP_05322638.1| amino-acid ABC transporter, permease protein [Clostridium difficile CIP 107932] Length = 223 Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 46/160 (28%), Positives = 90/160 (56%), Gaps = 15/160 (9%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 VFS ++G +++L S ++ K + +Y+S F G P L+ + L+F Sbjct: 31 VFSLIIGTIVAL-----SSYYKVKVLNQICKVYVSIFR--GTP---LMPQLFFLYFGLAY 80 Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 + F + P F + I LS A+++E +R+ ++++ +GQ+EAA +GLT+ + Sbjct: 81 MNDFV----KNMDPVFAT-SIVLSLNMGAYMSETIRASILSIDKGQIEAAYVMGLTNLQT 135 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 + +++PQA+R +P L + +++L+K SS+A VG D++ Sbjct: 136 MKRIVIPQAVRVALPSLFNNFIDLIKGSSVAFVVGVNDIM 175 Score = 42.7 bits (99), Expect = 0.10, Method: Compositional matrix adjust. Identities = 31/88 (35%), Positives = 45/88 (51%), Gaps = 7/88 (7%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 I+ F T LA S ++ + IIGT+V K++ IC+VYV +FR P + +FFL Sbjct: 15 IMKSFNVTVILAISSLVFSLIIGTIVALSSYYKVKVLNQICKVYVSIFRGTPLMPQLFFL 74 Query: 149 Y-------KSVLSVLPIPDHSIVLPFGM 169 Y V ++ P+ SIVL M Sbjct: 75 YFGLAYMNDFVKNMDPVFATSIVLSLNM 102 >gi|222081580|ref|YP_002540944.1| amino acid ABC transporter [Agrobacterium radiobacter K84] gi|221726259|gb|ACM29348.1| amino acid ABC transporter [Agrobacterium radiobacter K84] Length = 216 Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 44/113 (38%), Positives = 63/113 (55%), Gaps = 8/113 (7%) Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 L++ P QF + +SP +++ + L Y A AEI R+G AVP+G+ EAA L Sbjct: 71 LYYGGP---QFGLV----LSP-YVAGIVGLGLYGAGPFAEIFRAGFNAVPKGECEAAAML 122 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356 GLT + V LPQAMR +PP Q +NL+K S++ + +L V GTI Sbjct: 123 GLTPGQTFLYVELPQAMRLTLPPSIGQAINLVKESAVLSVITLGELTKVAGTI 175 >gi|229816602|ref|ZP_04446900.1| hypothetical protein COLINT_03659 [Collinsella intestinalis DSM 13280] gi|229807808|gb|EEP43612.1| hypothetical protein COLINT_03659 [Collinsella intestinalis DSM 13280] Length = 212 Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 40/126 (31%), Positives = 69/126 (54%), Gaps = 3/126 (2%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +A + +T+A +AEIVR+GL AVP GQ EAA + G R ++LPQ R I P L Q Sbjct: 85 LAFTLFTSAVMAEIVRAGLNAVPAGQFEAAQSQGFGFFATMRYIILPQTFRIITPALFGQ 144 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI---YLSLSIMIALFMNR 387 ++K+SS + A+ + ++ ++++++ F+ Y +L+ I+L + R Sbjct: 145 CTTVIKDSSYLSGINVAEFMYTTNVVMAHAVSLDQVLMLYGFVFALYFALNFGISLLVRR 204 Query: 388 LNAKIA 393 K+A Sbjct: 205 YQRKVA 210 Score = 36.6 bits (83), Expect = 6.7, Method: Compositional matrix adjust. Identities = 19/64 (29%), Positives = 36/64 (56%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 IL GF+ T ++ +I + ++GT++ + + W+ Y+E+FR P L+ I F+ Sbjct: 12 ILGGFIKTIEISVLSIICSVVVGTVLALVKSYGPRPFRWLVSAYIELFRCTPNLLWILFI 71 Query: 149 YKSV 152 Y +V Sbjct: 72 YFTV 75 >gi|167589201|ref|ZP_02381589.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ubonensis Bu] Length = 300 Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 44/137 (32%), Positives = 79/137 (57%), Gaps = 4/137 (2%) Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321 +SP F++ + L+ + AAF AE++R G+++V +GQ+EAA ALGL T ++LPQAMR Sbjct: 165 ISP-FLAAVLGLTLHHAAFSAEVIRGGILSVDQGQLEAAAALGLPRAHQTTRIVLPQAMR 223 Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL---IWMFIYLSLS 378 +I+P + + L K +S+ + +L I + + I +++ +W I L++ Sbjct: 224 AILPTAFNDLIMLAKGTSMVYVLAMPELFYTVQVIYRRNLEVIPLLMVATVWYLIILTVL 283 Query: 379 IMIALFMNRLNAKIALK 395 I + + R A+ AL+ Sbjct: 284 SAIQVQVERHYARGALR 300 >gi|186473669|ref|YP_001861011.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia phymatum STM815] gi|184196001|gb|ACC73965.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia phymatum STM815] Length = 218 Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 50/141 (35%), Positives = 75/141 (53%), Gaps = 4/141 (2%) Query: 259 GSTVSP--EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316 GS + P F+S I L TAA +AEI R L AVP GQ EAA ALGL VL+ Sbjct: 77 GSDLIPLSPFVSAVIGLGLITAANVAEIYRGALKAVPAGQYEAARALGLPALLQYHDVLI 136 Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376 PQ R +P L + + LLK++++A +G DL + +T + IE+ + +Y Sbjct: 137 PQIFRLALPSLATYAIGLLKDTAVASTIGVHDLAFSAYRVSQETFRGIEVYAAFGLVYFL 196 Query: 377 LSIMIALFMNRLNAKIALKEK 397 +S+ +A L+ + L+E+ Sbjct: 197 ISLAMAYATRGLDRR--LRER 215 >gi|331659559|ref|ZP_08360501.1| inner membrane amino-acid ABC transporter permease protein YhdY [Escherichia coli TA206] gi|331054141|gb|EGI26170.1| inner membrane amino-acid ABC transporter permease protein YhdY [Escherichia coli TA206] Length = 367 Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 33/76 (43%), Positives = 53/76 (69%) Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335 + +A++AE+VR GL A+P+GQ EAA +L L + K LV++PQA++ +IP L + + L Sbjct: 241 FQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQGLVIMPQALKLVIPGLVNTIIALF 300 Query: 336 KNSSLAVAVGFADLVS 351 K++SL + +G DL S Sbjct: 301 KDTSLVIIIGLFDLFS 316 >gi|326315960|ref|YP_004233632.1| ectoine/hydroxyectoine ABC transporter permease EhuD [Acidovorax avenae subsp. avenae ATCC 19860] gi|323372796|gb|ADX45065.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD [Acidovorax avenae subsp. avenae ATCC 19860] Length = 220 Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 64/225 (28%), Positives = 108/225 (48%), Gaps = 32/225 (14%) Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL----LYISTFL--IFGLPT 234 +T+ F+ S LG++L+L GK P+ L STF+ I GLP Sbjct: 21 VTVQVTVLAFLLSSALGLILAL-------------GKLSPVRAVSLAASTFINVIRGLPI 67 Query: 235 LVLIALKYQLHFDKPVLG-QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293 +V + + ++F P G Q F + I L +A+ AE R+G+ AV Sbjct: 68 IVQL---FYIYFVLPDFGVQLT---------AFQAGVIGLGIAYSAYQAENFRAGIEAVD 115 Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353 GQ EAA+A+G+ R V+LPQA R +PP + + +LK+SSL + A++ G Sbjct: 116 PGQREAALAMGMRPALLMRRVILPQAFRIALPPYGNTLVMMLKDSSLVSTITVAEMTRAG 175 Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 I + T Q + + + +YL++S+ + + RL ++ ++ Sbjct: 176 QLIASSTFQNMTVYTLVALLYLAMSLPLVACLRRLERRLGAGSRR 220 >gi|13474098|ref|NP_105666.1| amino acid ABC transporter, permease protein [Mesorhizobium loti MAFF303099] gi|14024850|dbj|BAB51452.1| amino acid ABC transporter, permease protein [Mesorhizobium loti MAFF303099] Length = 215 Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 51/161 (31%), Positives = 86/161 (53%), Gaps = 16/161 (9%) Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265 R+S+H K + L YI+ F G P L+ + L + F P+LG + P Sbjct: 42 RISKH---KWSRRLASGYIALFQ--GTPLLMQLFLMF---FGLPMLGL-------RIEP- 85 Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 + + + L+ + +A++AEI RSG+ A+PRGQ +A +LGL + + RL++LPQA Sbjct: 86 WTAAVLGLTFFASAYLAEIWRSGVDALPRGQWDAGASLGLHYLQELRLIILPQAFSITRA 145 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 P + L+K+++L +GF +LV I N T + ++ Sbjct: 146 PTVGFLVQLIKSTALTSIIGFEELVRTSNAINNATFEPFKV 186 >gi|303240911|ref|ZP_07327422.1| polar amino acid ABC transporter, inner membrane subunit [Acetivibrio cellulolyticus CD2] gi|302591497|gb|EFL61234.1| polar amino acid ABC transporter, inner membrane subunit [Acetivibrio cellulolyticus CD2] Length = 210 Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 51/194 (26%), Positives = 97/194 (50%), Gaps = 17/194 (8%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 +F+ LG+++S R + A+ +YIS ++ G P ++ + + Y Sbjct: 23 IFALPLGLIISF-----GRRAKNRIISAIAGIYIS--IMRGTPLMLQLVVVY-------- 67 Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 G + GG F + IAL AA+ AEI R G+ ++P+GQ EA LG T + Sbjct: 68 FGPYYVFGGKI--DRFPAAVIALVLNYAAYFAEIFRGGIDSIPKGQYEAGEVLGFTKVQV 125 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370 ++LPQ ++ I+P ++++ + L+K+++L A+G A++ + + G + + Sbjct: 126 FFKIVLPQVVKRILPAISNEVITLVKDTALVTAIGVAEMFKAANNEMTRIGSMQPVFVAG 185 Query: 371 MFIYLSLSIMIALF 384 +F Y+ I+ LF Sbjct: 186 VFYYVMNLIIAKLF 199 >gi|330970030|gb|EGH70096.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. aceris str. M302273PT] Length = 329 Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 65/192 (33%), Positives = 96/192 (50%), Gaps = 15/192 (7%) Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF--DKP 249 FS +LG L+L RLS AL YI F +P L+++ + Y + D Sbjct: 97 FSIILGTALAL--ARLS---GSPLLAALAWGYIWFFR--SMPALLVLIILYNFAYLYDHI 149 Query: 250 VLG----QFNFIGGSTVS--PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 VLG Q F STV +F + LS +A+ AEI+R GLI V GQ EAA AL Sbjct: 150 VLGVPFTQLVFAEWSTVDVLSQFTVAVLGLSLMQSAYTAEIIRGGLIGVDAGQHEAAAAL 209 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363 GL + ++LPQA+RSI+P ++ + L+K +S+ + +L I N+T Sbjct: 210 GLPASRRIFRIILPQALRSILPSGFNEIIGLVKGTSIVYVLALPELFYTVQVIYNRTQAV 269 Query: 364 IEIILIWMFIYL 375 I ++++ YL Sbjct: 270 IPLLIVATVWYL 281 >gi|304396997|ref|ZP_07378877.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea sp. aB] gi|304355793|gb|EFM20160.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea sp. aB] Length = 366 Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 34/76 (44%), Positives = 52/76 (68%) Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335 + +A++AE+VR GL A+P+GQ EAA +L L + K LV+LPQA++ IP L + + L Sbjct: 240 FQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQMLVILPQALKLTIPGLVNTIIALF 299 Query: 336 KNSSLAVAVGFADLVS 351 K++SL + +G DL S Sbjct: 300 KDTSLVIIIGLFDLFS 315 >gi|262041041|ref|ZP_06014260.1| arginine ABC superfamily ATP binding cassette transporter [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|259041599|gb|EEW42651.1| arginine ABC superfamily ATP binding cassette transporter [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 238 Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 69/223 (30%), Positives = 112/223 (50%), Gaps = 20/223 (8%) Query: 191 VFSFVLGIVLS-LFATRLSRHFHE----KTG-----KALPLLYISTFLIFGLPTLVLI-- 238 V + V+G+VL+ LFA S + TG + LP + + F+ FG L+L Sbjct: 19 VCALVIGLVLAMLFAVLESVKWRPVAWLATGIVTILRGLPEILVVLFIYFGSSQLLLTLS 78 Query: 239 -ALKYQLHFDK-PVLGQF-NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295 L F + PV Q NF VSP F+ IALS AA+ ++ +R L AVP+G Sbjct: 79 DGFTIPLGFTQIPVQMQIENF----DVSP-FLCGAIALSLLYAAYASQTLRGALKAVPQG 133 Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355 Q E+ ALGL+ +++PQ R +P L +Q+L LLK+++L + DL+ + Sbjct: 134 QWESGQALGLSKAAIFFRLVMPQMWRHALPGLGNQWLVLLKDTALVSLISVNDLMLQTKS 193 Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 I +T + +I IYL ++++ + R++ + E+K Sbjct: 194 IATRTQEPFNWYIIAAAIYLVITLLSQYILKRIDQRATRFERK 236 >gi|227114002|ref|ZP_03827658.1| putative amino-acid transport system permease protein [Pectobacterium carotovorum subsp. brasiliensis PBR1692] gi|253686636|ref|YP_003015826.1| polar amino acid ABC transporter, inner membrane subunit [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251753214|gb|ACT11290.1| polar amino acid ABC transporter, inner membrane subunit [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 221 Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 53/200 (26%), Positives = 100/200 (50%), Gaps = 18/200 (9%) Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249 F+F LGI+++L R + K K L Y+ ++I G P LV + L + Sbjct: 31 FIFGLALGIIIALV-----RLYGPKPLKWLGDFYV--WVIRGTPLLVQLFLIF------- 76 Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309 + F + I + A+ +EIVR +++VP+GQ AA +LG+ R+ Sbjct: 77 ----YGLPSAGITLDAFPAALIGFTISVGAYSSEIVRGAILSVPKGQWNAAYSLGMNGRQ 132 Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369 A R V+ PQ++ +PPL++ +++L+K++SLA + ++ I++ T + + + + Sbjct: 133 AIRWVIFPQSVFVSLPPLSNTFISLIKDTSLAAVITVPEMFLSAQRIVSVTYEPLILYVE 192 Query: 370 WMFIYLSLSIMIALFMNRLN 389 IYL S +++ +L Sbjct: 193 AALIYLMFSTVLSQLQVKLE 212 >gi|92115412|ref|YP_575340.1| amino acid ABC transporter permease [Chromohalobacter salexigens DSM 3043] gi|91798502|gb|ABE60641.1| amino acid ABC transporter membrane protein, PAAT family [Chromohalobacter salexigens DSM 3043] Length = 223 Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 38/115 (33%), Positives = 68/115 (59%) Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 A+I+EIVR G+ ++ +GQ EA ++LGL+ R ++ PQA+R +IP L +Q + +K Sbjct: 104 AGAYISEIVRGGVQSIEKGQREAGLSLGLSRIDTFRYIIWPQALRRMIPALGNQGIVSIK 163 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 ++SL +G +LV G I T A+E+ + +YL +++ ++ + L K Sbjct: 164 DTSLFSVIGVGELVRQGQVYIATTFTALEVYFMVAMLYLVITLSLSTALRLLERK 218 Score = 38.1 bits (87), Expect = 2.3, Method: Compositional matrix adjust. Identities = 21/71 (29%), Positives = 38/71 (53%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G T ++F G+ +IG + G R++ +++ W Y+EVFR P LV + F+ Sbjct: 19 LLTGIPWTLLISFGGLAIGFVIGIIFGLLRINPLRVLRWPAIAYIEVFRGTPVLVQVLFI 78 Query: 149 YKSVLSVLPIP 159 + + +L P Sbjct: 79 FYGLPQLLGGP 89 >gi|66046122|ref|YP_235963.1| amino acid ABC transporter permease [Pseudomonas syringae pv. syringae B728a] gi|63256829|gb|AAY37925.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Pseudomonas syringae pv. syringae B728a] Length = 329 Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 65/192 (33%), Positives = 96/192 (50%), Gaps = 15/192 (7%) Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF--DKP 249 FS +LG L+L RLS AL YI F +P L+++ + Y + D Sbjct: 97 FSIILGTALAL--ARLS---GSPLLAALAWGYIWFFR--SMPALLVLIILYNFAYLYDHI 149 Query: 250 VLG----QFNFIGGSTVS--PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 VLG Q F STV +F + LS +A+ AEI+R GLI V GQ EAA AL Sbjct: 150 VLGVPFTQLVFAEWSTVDVLSQFTVAVLGLSLMQSAYTAEIIRGGLIGVDAGQHEAAAAL 209 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363 GL + ++LPQA+RSI+P ++ + L+K +S+ + +L I N+T Sbjct: 210 GLPASRRIFRIILPQALRSILPSGFNEIIGLVKGTSIVYVLALPELFYTVQVIYNRTQAV 269 Query: 364 IEIILIWMFIYL 375 I ++++ YL Sbjct: 270 IPLLIVATVWYL 281 >gi|288905474|ref|YP_003430696.1| amino acid ABC transporter, permease protein [Streptococcus gallolyticus UCN34] gi|306831557|ref|ZP_07464715.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|325978464|ref|YP_004288180.1| amino acid ABC transporter permease [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] gi|288732200|emb|CBI13765.1| putative amino acid ABC transporter, permease protein [Streptococcus gallolyticus UCN34] gi|304426342|gb|EFM29456.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|325178392|emb|CBZ48436.1| amino acid ABC transporter, permease protein [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] Length = 230 Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 34/89 (38%), Positives = 59/89 (66%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +A++ AA I+E+ +S A+P+GQ+EA +++GLT + +LLPQA R +P +T+ Sbjct: 102 LAMTLLFAASISEVFKSSYQALPKGQLEAGLSIGLTDYQTFVRILLPQAFRIALPNITTA 161 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQ 359 +NLLK+ +LA +G DL+ G +I++ Sbjct: 162 IINLLKDIALAYTIGLVDLMGAGNLVISR 190 >gi|116617768|ref|YP_818139.1| ABC-type amino acid transport system, permease and periplasmic component [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] gi|116096615|gb|ABJ61766.1| amino acid ABC transporter membrane protein, PAAT family / amino acid ABC transporter substrate-binding protein, PAAT family [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] Length = 490 Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 38/117 (32%), Positives = 72/117 (61%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + +A+ +AA++AEI+RSG+ +V GQ EA+ +LGL+ K R V+LPQA+++I+P Sbjct: 359 FAAGALAMGLNSAAYVAEIIRSGINSVDFGQTEASRSLGLSKGKTMRYVILPQAVKNILP 418 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382 L ++++ ++K S+ +G +L+ G + + + ++I IY L+ I+ Sbjct: 419 ALGNEFVTIIKEGSVVSVIGVGELMFQTGVVQGASFKPFFPLVIASLIYFVLTFGIS 475 >gi|148652957|ref|YP_001280050.1| polar amino acid ABC transporter inner membrane subunit [Psychrobacter sp. PRwf-1] gi|148572041|gb|ABQ94100.1| polar amino acid ABC transporter, inner membrane subunit [Psychrobacter sp. PRwf-1] Length = 245 Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 56/208 (26%), Positives = 105/208 (50%), Gaps = 17/208 (8%) Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249 F+ + +V++L + K L +Y+S I G P LV + + + + P Sbjct: 50 FIIGMAIALVVALIRVVPRQALWHKIAYRLARIYVSA--IRGTPMLVQL---FIIFYGLP 104 Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309 +G + F + IA S A+ +E VR+ ++++P+GQ EA +GLT+ + Sbjct: 105 SVG--------VMLEPFPAAIIAFSLNIGAYASETVRASILSIPKGQWEAGATVGLTYLQ 156 Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI----E 365 + R V+LPQA+R +PPL++ +++L+K++SLA + ++ I + + + E Sbjct: 157 SFRHVILPQALRVSVPPLSNTFISLVKDTSLASLILVTEMFKQAQIITARNYEFMLVYTE 216 Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIA 393 LI+ I L+LS + RL+ +A Sbjct: 217 AALIYWVICLALSAVQGRLETRLDRYVA 244 >gi|92112257|ref|YP_572185.1| amino acid ABC transporter permease [Chromohalobacter salexigens DSM 3043] gi|91795347|gb|ABE57486.1| amino acid ABC transporter membrane protein 2, PAAT family [Chromohalobacter salexigens DSM 3043] Length = 369 Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 60/216 (27%), Positives = 105/216 (48%), Gaps = 34/216 (15%) Query: 149 YKSVLSVLPIPDHSIVLPFG-----MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL- 202 + +V++V+ P + VL G +++ R LT+ V S +GIVL+L Sbjct: 127 WAAVIAVIGFPIAAYVLLLGGHFGLIYVPTREWGGLMLTLTVATIGIVGSLPIGIVLALG 186 Query: 203 ------FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256 F +S F E + +PL+ + LP V Q+ FDK Sbjct: 187 RRSNLPFVRAVSVVFIEFW-RGVPLITVLFMASVMLPLFV----PTQVEFDK-------- 233 Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316 + + + + +A++AE+VR GL A+P GQ EA ALGL + + L++L Sbjct: 234 ---------LLRALVGIMLFWSAYMAEVVRGGLQAIPSGQDEAGKALGLGYWQRMGLIVL 284 Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352 PQA++ +IP + + ++ L K++SL + +G DL+++ Sbjct: 285 PQALKLVIPGIVNTFIALFKDTSLVLIIGLFDLLAI 320 >gi|52080938|ref|YP_079729.1| high affinity arginine transport system permease [Bacillus licheniformis ATCC 14580] gi|52786313|ref|YP_092142.1| YqiY [Bacillus licheniformis ATCC 14580] gi|319645106|ref|ZP_07999339.1| YqiY protein [Bacillus sp. BT1B_CT2] gi|52004149|gb|AAU24091.1| high affinity arginine transport system permease protein [Bacillus licheniformis ATCC 14580] gi|52348815|gb|AAU41449.1| YqiY [Bacillus licheniformis ATCC 14580] gi|317392915|gb|EFV73709.1| YqiY protein [Bacillus sp. BT1B_CT2] Length = 220 Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 47/176 (26%), Positives = 88/176 (50%), Gaps = 29/176 (16%) Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSR------HFHEKTGKALPLLYISTFLIFGLPT 234 +T+ A V F+LG++++L + F+ + PL+ + +GLP Sbjct: 22 VTLKVVAAAAVLGFLLGVLITLLKISSIKPLAWIADFYTSIFRGTPLVLQLMIVYYGLPQ 81 Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294 + L FD + + IA +AA+++EI+R+G+ A+ + Sbjct: 82 V--------LGFDIDA---------------YWAAVIAFGLNSAAYVSEIIRAGINAIDK 118 Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 GQ EAA+ALG+ + K + +LLPQA ++I+P L ++ + L K S++ +G D++ Sbjct: 119 GQKEAAMALGVPYAKMMKDLLLPQAFKNIMPALINESITLTKESAVVTVIGLGDIM 174 >gi|256851552|ref|ZP_05556941.1| glutamine ABC transporter permease component [Lactobacillus jensenii 27-2-CHN] gi|260660975|ref|ZP_05861890.1| glutamine ABC transporter permease [Lactobacillus jensenii 115-3-CHN] gi|256616614|gb|EEU21802.1| glutamine ABC transporter permease component [Lactobacillus jensenii 27-2-CHN] gi|260548697|gb|EEX24672.1| glutamine ABC transporter permease [Lactobacillus jensenii 115-3-CHN] Length = 102 Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 42/100 (42%), Positives = 61/100 (61%), Gaps = 2/100 (2%) Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS-LAVAVGFADLVSVG 353 GQME A + G+T+ +A R V+LPQA + IP L +Q++NL+KNSS LA GF DL+ G Sbjct: 4 GQMEGARSNGMTYMQAMRFVILPQAFKVAIPSLGNQFINLIKNSSVLAFVAGF-DLMYQG 62 Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393 I + Q + L+ YL L++ ++ +M L KIA Sbjct: 63 DVIAFSSFQTVNTYLVVGCFYLVLTLPLSYYMRYLEKKIA 102 >gi|226314897|ref|YP_002774793.1| amino acid ABC transporter permease protein [Brevibacillus brevis NBRC 100599] gi|226097847|dbj|BAH46289.1| probable amino acid ABC transporter permease protein [Brevibacillus brevis NBRC 100599] Length = 234 Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 63/196 (32%), Positives = 103/196 (52%), Gaps = 14/196 (7%) Query: 195 VLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK-PVLGQ 253 V G L LF + L + ++ + +Y+ F G P LV I L +HF P + Sbjct: 39 VCGTFLGLFIS-LGKMSSKRILRWTCSIYVELFR--GTPMLVQILL---IHFAVIPSIWG 92 Query: 254 FNFIGGSTVSPEFM-SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312 + G S SPE + S ++ALS AA++AEI R+G+ ++ GQMEAA +LG+ A R Sbjct: 93 ILYPGAS--SPEAIYSGFVALSLNAAAYMAEIFRAGIQSIDPGQMEAARSLGMNKGLAMR 150 Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372 ++LPQA ++P + ++++ LLK+SSL + +L + T + L Sbjct: 151 QIILPQAFTRMLPAIGNEFIALLKDSSLLAVIATPELNYAAMNVAKSTFERYPPYLTEAA 210 Query: 373 IYLSLSIMIALFMNRL 388 +YL L+ LF++R+ Sbjct: 211 VYLVLT----LFLSRI 222 Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust. Identities = 21/70 (30%), Positives = 38/70 (54%) Query: 84 SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143 Y + G +NT L + T +G + G++S+ +++ W C +YVE+FR P LV Sbjct: 18 DYRELFIRGIMNTILLTAVATVCGTFLGLFISLGKMSSKRILRWTCSIYVELFRGTPMLV 77 Query: 144 VIFFLYKSVL 153 I ++ +V+ Sbjct: 78 QILLIHFAVI 87 >gi|160900970|ref|YP_001566552.1| polar amino acid ABC transporter inner membrane protein [Delftia acidovorans SPH-1] gi|160366554|gb|ABX38167.1| polar amino acid ABC transporter, inner membrane subunit [Delftia acidovorans SPH-1] Length = 217 Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 38/125 (30%), Positives = 68/125 (54%), Gaps = 12/125 (9%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P+F + +A + AA+ AEI R+G+ +V RGQ E A LG+++ + R ++LPQ I Sbjct: 85 PDFPAAVVAFALNYAAYFAEIFRAGIQSVDRGQYEGAKVLGMSYGQTMRRIILPQMWARI 144 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ------------AIEIILIWM 371 IPP++++ + L+K++SL + DL+ I+ + + ++L W+ Sbjct: 145 IPPVSNETITLVKDTSLIYVLALNDLLRAARGIVQRDFTITPFVVAAGFYLVMTLVLTWI 204 Query: 372 FIYLS 376 F YL Sbjct: 205 FQYLE 209 >gi|300310828|ref|YP_003774920.1| amino acid ABC transporter permease [Herbaspirillum seropedicae SmR1] gi|300073613|gb|ADJ63012.1| ABC-type amino acid transport system, permease component protein [Herbaspirillum seropedicae SmR1] Length = 216 Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 42/128 (32%), Positives = 68/128 (53%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P ++ IA++ Y++A++ EI R + AVP Q EA+ AL +T + R V+LPQA+R Sbjct: 84 PPMVAATIAMTIYSSAYLGEIWRGCIEAVPVPQWEASTALAMTRWQQLRYVILPQAVRIS 143 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 +PP + ++KN+S+A +G +L G + N T Q + I IY ++ Sbjct: 144 LPPTVGFLVQIVKNTSIASIIGLVELAQAGKLVSNATFQPFLVFPIVAGIYFVFCYPLSR 203 Query: 384 FMNRLNAK 391 F L K Sbjct: 204 FAFALERK 211 >gi|227432357|ref|ZP_03914349.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] gi|227351878|gb|EEJ42112.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] Length = 490 Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 38/117 (32%), Positives = 72/117 (61%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + +A+ +AA++AEI+RSG+ +V GQ EA+ +LGL+ K R V+LPQA+++I+P Sbjct: 359 FAAGALAMGLNSAAYVAEIIRSGINSVDFGQTEASRSLGLSKGKTMRYVILPQAVKNILP 418 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382 L ++++ ++K S+ +G +L+ G + + + ++I IY L+ I+ Sbjct: 419 ALGNEFVTIIKEGSVVSVIGVGELMFQTGVVQGASFKPFFPLVIASLIYFVLTFGIS 475 >gi|76574840|gb|ABA47314.1| probable amino acid permease PA2202 [Pseudomonas cichorii] Length = 228 Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 42/135 (31%), Positives = 74/135 (54%), Gaps = 1/135 (0%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P ++ ALS A++A V SG++++ GQ AA ALG++ + RL++LPQA+ + Sbjct: 94 PALFTVVCALSLIGGAYLAHSVHSGILSLSSGQWAAAKALGMSPWQVLRLIILPQALPIM 153 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG-QAIEIILIWMFIYLSLSIMIA 382 +P +Q+++L+K++SLA +G +L V + N+ EI L +Y + + Sbjct: 154 LPSFLNQWISLIKDTSLAYVIGVGELSFVATQVSNRVMVYPTEIFLFIALVYFIICSALD 213 Query: 383 LFMNRLNAKIALKEK 397 L NRL + K+ Sbjct: 214 LVANRLTGTGSTKKS 228 >gi|300855936|ref|YP_003780920.1| putative amino acid ABC transporter permease [Clostridium ljungdahlii DSM 13528] gi|300436051|gb|ADK15818.1| predicted ABC-type aminoacid transporter, permease component [Clostridium ljungdahlii DSM 13528] Length = 221 Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 66/240 (27%), Positives = 114/240 (47%), Gaps = 33/240 (13%) Query: 167 FGMFLNNRGLSFPTL--TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTG------KA 218 F F+N + P+L T++ + +F+ +L +V+S+ ++ G +A Sbjct: 5 FQWFINLFPIVLPSLKLTIEISLVSLIFTLLLSVVISIIRYYKVWGLYQLFGVYITFFRA 64 Query: 219 LPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTA 278 PL+ L FGLP V+ ALK F V IAL+ TA Sbjct: 65 TPLVAQLFMLYFGLPC-VIPALKSMTAFQATV--------------------IALTLNTA 103 Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338 +F+AE +R+ L +V GQ+EA ++ +T + V+LPQA +P L +Q++ ++K S Sbjct: 104 SFMAETLRAALESVEVGQLEACYSMSMTKYQTMMRVVLPQAFVVALPSLGNQFIGIIKGS 163 Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 +L VG AD+++ T T + E L IYL +I +F+ ++ + + +K Sbjct: 164 ALGFTVGLADIMAKAKTEAALTLRFFEAYLCVTLIYL----VIVIFVEKIQRLVEKRIQK 219 >gi|299537491|ref|ZP_07050785.1| polar amino acid ABC transporter, inner membrane subunit [Lysinibacillus fusiformis ZC1] gi|298727052|gb|EFI67633.1| polar amino acid ABC transporter, inner membrane subunit [Lysinibacillus fusiformis ZC1] Length = 231 Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 33/86 (38%), Positives = 56/86 (65%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 +F + IAL ++ A+IAEI R + ++ +GQMEA +LG+T+ K R ++LPQ+ + Sbjct: 88 SDFAAGSIALGIHSGAYIAEIFRGSIQSIDKGQMEAGRSLGMTYFKTMRRIILPQSFKRA 147 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADL 349 IP L +Q++ LK+SSL + ++L Sbjct: 148 IPALANQFIIGLKDSSLVAYIAVSEL 173 >gi|194365477|ref|YP_002028087.1| polar amino acid ABC transporter inner membrane subunit [Stenotrophomonas maltophilia R551-3] gi|194348281|gb|ACF51404.1| polar amino acid ABC transporter, inner membrane subunit [Stenotrophomonas maltophilia R551-3] Length = 581 Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 39/128 (30%), Positives = 71/128 (55%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + + L+ AAF AE++R G+++V GQ EAA ALGL + R ++LPQAMRSI+P Sbjct: 161 FTAAVLGLTLNQAAFSAEVIRGGILSVDHGQYEAAAALGLPRGRQVRRIILPQAMRSILP 220 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 + + L K++S+ + +L I + + + ++++ YL + +++L Sbjct: 221 AAFNDVIGLAKSTSVVYVLALPELFYTVQVIYRRNLEVVPLLMVATVWYLVILTVLSLLQ 280 Query: 386 NRLNAKIA 393 R+ + A Sbjct: 281 RRVEQRFA 288 >gi|329296884|ref|ZP_08254220.1| polar amino acid ABC transporter inner membrane subunit [Plautia stali symbiont] Length = 221 Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 57/206 (27%), Positives = 94/206 (45%), Gaps = 30/206 (14%) Query: 193 SFVLGIVLSLFATRLSR------HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246 S + G +L++ R SR + + ALPLL + L F LP +Y + Sbjct: 31 SLLWGALLAVLLMRASRFWLRLLNLYRGLTLALPLLVVIYLLYFVLP-------EYDITL 83 Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306 PV+G +AL+ Y A +IA+++RS + A+P+GQ EA LGL+ Sbjct: 84 SSPVVG-----------------VLALTLYYAPYIAQVIRSAIDALPKGQWEACRVLGLS 126 Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 + R V+LPQ + ++ PL L+K+S+L V + + I+ T +EI Sbjct: 127 RSEQLRDVVLPQTLPQMLSPLVGLMTVLIKDSALLSIVSVQEFMYAAKQAISDTYAPLEI 186 Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKI 392 L Y L+ +I L +++ Sbjct: 187 YLTVALCYWLLNSVIDWLARGLESRM 212 >gi|310287213|ref|YP_003938471.1| Glutamate transport system permease protein GluC [Bifidobacterium bifidum S17] gi|311064073|ref|YP_003970798.1| Glutamate transport system permease protein GluC [Bifidobacterium bifidum PRL2010] gi|309251149|gb|ADO52897.1| Glutamate transport system permease protein GluC [Bifidobacterium bifidum S17] gi|310866392|gb|ADP35761.1| Glutamate transport system permease protein GluC [Bifidobacterium bifidum PRL2010] Length = 225 Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 66/214 (30%), Positives = 104/214 (48%), Gaps = 25/214 (11%) Query: 191 VFSFVLGIVLSLF------ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244 +FS +LG+VL + + R + + K LPL I F++ G + +L Sbjct: 29 LFSLILGVVLVMMRISPISSLRTVAGAYVELFKNLPLTIIMVFMVLGAYA------QLKL 82 Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304 F + F ++ + LS YTAAF+ E +RSG+ VP GQ EAA ALG Sbjct: 83 TFSDTFVTNFFWLAVT-----------GLSLYTAAFVCESLRSGINTVPIGQAEAARALG 131 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN-SSLAVAVGFADLVSVGGTIIN-QTGQ 362 L ++ ++LPQA R + PL + + LLKN + A A + S+ T+I Sbjct: 132 LGFMQSATQIILPQAFRGSVAPLGNTLIALLKNSTVAAAASVATETSSLMSTMIEFHPDV 191 Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 ++I LI+ F Y+ L I I + L+ K+A++ Sbjct: 192 IVQIFLIFAFGYVILIIPIGMLTTYLSNKLAVRR 225 >gi|227510176|ref|ZP_03940225.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227513104|ref|ZP_03943153.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus buchneri ATCC 11577] gi|227083679|gb|EEI18991.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus buchneri ATCC 11577] gi|227190381|gb|EEI70448.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 214 Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 47/182 (25%), Positives = 91/182 (50%), Gaps = 25/182 (13%) Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269 + ++ + PLL F+ +GLP + +I +Y +L Sbjct: 53 NLYDWLMRGTPLLLQLIFVFYGLPVIGIIFERYD-----------------------AAL 89 Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329 + + YTA F AEI R G +VPRGQ E+A L L++ + R +++PQ + ++P + + Sbjct: 90 FAFILNYTAYF-AEIFRGGFQSVPRGQFESARVLRLSYGQTIRKIIIPQVFKIVLPSIGN 148 Query: 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 + +NL+K+SSL +G DL+ G + + ++L+ + IYL+L+ + + + + Sbjct: 149 EVINLVKDSSLVYVIGLGDLLRAGNVATARDVTLLPLVLVGI-IYLALTAICTIVLKVIE 207 Query: 390 AK 391 + Sbjct: 208 KR 209 >gi|254975773|ref|ZP_05272245.1| amino-acid ABC transporter, permease protein [Clostridium difficile QCD-66c26] gi|255314902|ref|ZP_05356485.1| amino-acid ABC transporter, permease protein [Clostridium difficile QCD-76w55] gi|255517576|ref|ZP_05385252.1| amino-acid ABC transporter, permease protein [Clostridium difficile QCD-97b34] gi|255650687|ref|ZP_05397589.1| amino-acid ABC transporter, permease protein [Clostridium difficile QCD-37x79] gi|260683774|ref|YP_003215059.1| putative amino-acid ABC transporter permease [Clostridium difficile CD196] gi|260687434|ref|YP_003218568.1| putative amino-acid ABC transporter permease [Clostridium difficile R20291] gi|306520612|ref|ZP_07406959.1| putative amino-acid ABC transporter, permease protein [Clostridium difficile QCD-32g58] gi|260209937|emb|CBA63909.1| probable amino-acid ABC transporter, permease protein [Clostridium difficile CD196] gi|260213451|emb|CBE05127.1| probable amino-acid ABC transporter, permease protein [Clostridium difficile R20291] Length = 220 Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 46/160 (28%), Positives = 90/160 (56%), Gaps = 15/160 (9%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 VFS ++G +++L S ++ K + +Y+S F G P L+ + L+F Sbjct: 31 VFSLIIGTIVAL-----SSYYKVKVLNQICKVYVSIFR--GTP---LMPQLFFLYFGLAY 80 Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 + F + P F + I LS A+++E +R+ ++++ +GQ+EAA +GLT+ + Sbjct: 81 MNDFV----KNMDPVFAT-SIVLSLNMGAYMSETIRASILSIDKGQIEAAYVMGLTNLQT 135 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 + +++PQA+R +P L + +++L+K SS+A VG D++ Sbjct: 136 MKRIVIPQAVRVALPSLFNNFIDLIKGSSVAFVVGVNDIM 175 Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust. Identities = 31/88 (35%), Positives = 45/88 (51%), Gaps = 7/88 (7%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 I+ F T LA S ++ + IIGT+V K++ IC+VYV +FR P + +FFL Sbjct: 15 IMKSFNVTVILAISSLVFSLIIGTIVALSSYYKVKVLNQICKVYVSIFRGTPLMPQLFFL 74 Query: 149 Y-------KSVLSVLPIPDHSIVLPFGM 169 Y V ++ P+ SIVL M Sbjct: 75 YFGLAYMNDFVKNMDPVFATSIVLSLNM 102 >gi|159905112|ref|YP_001548774.1| polar amino acid ABC transporter, inner membrane subunit [Methanococcus maripaludis C6] gi|159886605|gb|ABX01542.1| polar amino acid ABC transporter, inner membrane subunit [Methanococcus maripaludis C6] Length = 226 Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 66/209 (31%), Positives = 111/209 (53%), Gaps = 28/209 (13%) Query: 188 KIFVFSFVLGIVLS--LFATRLSRHFHEKTGKALPLLYISTFLI---FGLPTLVLIALKY 242 KI VFS ++G+ L L R+S + + YIS+F I G P LV I + Y Sbjct: 30 KITVFSIIIGLFLGTILGMGRISYNIIYR--------YISSFYIEFVRGTPLLVQIMIIY 81 Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302 F P G N + + +AL + A++ EI+++G+++V GQMEAA + Sbjct: 82 ---FGLPSFG-INL-------SAYTAGILALGLNSGAYVGEIIKAGILSVHVGQMEAARS 130 Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362 LG+ + +A R ++LPQA R+++P + ++++ LLK+SSL + +L VG I + T Sbjct: 131 LGMNYAQAMRYIILPQAFRNVLPAIGNEFILLLKDSSLLSVIAIVELTRVGKQIYSSTYN 190 Query: 363 A----IEIILIWMFIYLSLSIMIALFMNR 387 A + + L ++ + L LS ++ NR Sbjct: 191 AWTPLLGVALFYLIMTLPLSKLVQHIENR 219 >gi|153833179|ref|ZP_01985846.1| membrane protein [Vibrio harveyi HY01] gi|148870609|gb|EDL69517.1| membrane protein [Vibrio harveyi HY01] Length = 229 Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 40/89 (44%), Positives = 60/89 (67%), Gaps = 1/89 (1%) Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321 VSP F+S +ALS A++ ++ +R L AV RGQ EAA ALG++ A ++LPQA+R Sbjct: 87 VSP-FLSGVVALSLIFASYASQTLRGALKAVGRGQREAASALGISQAHAFVRIVLPQAVR 145 Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 +P LT+Q+L LLK+++L +G DL+ Sbjct: 146 HALPGLTNQWLVLLKDTALVSLIGVTDLL 174 >gi|78184424|ref|YP_376859.1| amino acid ABC transporter permease [Synechococcus sp. CC9902] gi|78168718|gb|ABB25815.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Synechococcus sp. CC9902] Length = 324 Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 41/116 (35%), Positives = 68/116 (58%), Gaps = 3/116 (2%) Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339 +IAE VR GL A+P Q EAA+ LGL+ R+ +LV+LPQA R +P LT+Q + LL+N+S Sbjct: 202 YIAEDVRGGLQAIPPTQREAAMVLGLSPRQTLQLVVLPQAFRVALPSLTNQAVGLLQNTS 261 Query: 340 LAVAVGFADLVSVGGTIINQT---GQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 L +G +L+ + +++ G+ +E+ + +Y +AL L ++ Sbjct: 262 LMAILGLVELLGISRSLLANPAFIGRYLEVYIWLAAVYWLACTAMALLARHLEIQL 317 >gi|330955285|gb|EGH55545.1| amino acid ABC transporter ATP-binding protein [Pseudomonas syringae Cit 7] Length = 349 Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 42/101 (41%), Positives = 63/101 (62%) Query: 260 STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319 S +S F S IAL A++AEI R GL++V +GQ EAA ALG+ A RLV++PQA Sbjct: 20 SVLSQPFYSGLIALVLTETAYMAEIHRGGLLSVLKGQREAARALGIRGLGAQRLVVIPQA 79 Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 +R +P LT++Y+ ++K +SL + +L+ VG + Q Sbjct: 80 IRISLPTLTNEYVTIVKLTSLVSVISLNELLLVGQRLYAQN 120 >gi|190574065|ref|YP_001971910.1| putative transmembrane ABC transporter [Stenotrophomonas maltophilia K279a] gi|190011987|emb|CAQ45609.1| putative transmembrane ABC transport protein [Stenotrophomonas maltophilia K279a] Length = 581 Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 39/128 (30%), Positives = 71/128 (55%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + + L+ AAF AE++R G+++V GQ EAA ALGL + R ++LPQAMRSI+P Sbjct: 161 FTAAVLGLTLNQAAFSAEVIRGGILSVDNGQYEAAAALGLPRARQVRRIILPQAMRSILP 220 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 + + L K++S+ + +L I + + + ++++ YL + +++L Sbjct: 221 AAFNDVIGLAKSTSVVYVLALPELFYTVQVIYRRNLEVVPLLMVATVWYLVILTVLSLMQ 280 Query: 386 NRLNAKIA 393 R+ + A Sbjct: 281 RRVEQRFA 288 >gi|134046500|ref|YP_001097985.1| polar amino acid ABC transporter inner membrane subunit [Methanococcus maripaludis C5] gi|132664125|gb|ABO35771.1| amino acid ABC transporter membrane protein, PAAT family [Methanococcus maripaludis C5] Length = 226 Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 66/209 (31%), Positives = 111/209 (53%), Gaps = 28/209 (13%) Query: 188 KIFVFSFVLGIVLS--LFATRLSRHFHEKTGKALPLLYISTFLI---FGLPTLVLIALKY 242 KI VFS ++G+ L L R+S + + YIS+F I G P LV I + Y Sbjct: 30 KITVFSIIIGLFLGTILGMGRISYNIVYR--------YISSFYIEFVRGTPLLVQIMIIY 81 Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302 F P G N + + +AL + A++ EI+++G+++V GQMEAA + Sbjct: 82 ---FGLPSFG-INL-------SAYTAGILALGLNSGAYVGEIIKAGILSVHVGQMEAARS 130 Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362 LG+ + +A R ++LPQA R+++P + ++++ LLK+SSL + +L VG I + T Sbjct: 131 LGMNYAQAMRYIILPQAFRNVLPAIGNEFILLLKDSSLLSVIAIVELTRVGKQIYSSTYN 190 Query: 363 A----IEIILIWMFIYLSLSIMIALFMNR 387 A + + L ++ + L LS ++ NR Sbjct: 191 AWTPLLGVALFYLIMTLPLSKLVQHIENR 219 >gi|306833703|ref|ZP_07466830.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus bovis ATCC 700338] gi|304424473|gb|EFM27612.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus bovis ATCC 700338] Length = 230 Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 34/89 (38%), Positives = 59/89 (66%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +A++ AA I+E+ +S A+P+GQ+EA +++GLT + +LLPQA R +P +T+ Sbjct: 102 LAMTLLFAASISEVFKSSYQALPKGQLEAGLSIGLTDYQTFVRILLPQAFRIALPNITTA 161 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQ 359 +NLLK+ +LA +G DL+ G +I++ Sbjct: 162 IINLLKDIALAYTIGLVDLMGAGNLVISR 190 >gi|319943776|ref|ZP_08018057.1| glutamine/glutamate ABC superfamily ATP binding cassette transporter, membrane protein [Lautropia mirabilis ATCC 51599] gi|319743009|gb|EFV95415.1| glutamine/glutamate ABC superfamily ATP binding cassette transporter, membrane protein [Lautropia mirabilis ATCC 51599] Length = 220 Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 52/141 (36%), Positives = 73/141 (51%), Gaps = 28/141 (19%) Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG--QFNFIGGSTVSPEFMSLYIALSCYT 277 PLL FL +GLP K +H+D G F+GGS Sbjct: 64 PLLIQLFFLYYGLP-------KIGIHWDGFTCGVIALTFLGGS----------------- 99 Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 ++AE +R+GL AVPRGQ+E+A A+GL + R V+LPQA+ +P LT+ L L+K Sbjct: 100 --YMAEALRAGLQAVPRGQVESARAIGLRRAQILRHVVLPQALAIALPALTANALFLVKE 157 Query: 338 SSLAVAVGFADLVSVGGTIIN 358 +S+ AV A+L+ V II Sbjct: 158 TSVINAVSVAELLFVTKDIIG 178 >gi|323526241|ref|YP_004228394.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia sp. CCGE1001] gi|323383243|gb|ADX55334.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. CCGE1001] Length = 219 Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 57/207 (27%), Positives = 103/207 (49%), Gaps = 18/207 (8%) Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251 F + G VL+L H +T L +Y+S ++ G P LV I + +++ P Sbjct: 31 FGLIAGAVLALMGVS-----HSRTLNWLARVYVS--VMRGTPLLVQI---FVIYYGLPSF 80 Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311 G ++ P + IALS AA+++E +R ++ + +GQ AA +LGL+ R+ Sbjct: 81 G-------ISLDPTPAGV-IALSANVAAYLSESMRGAILGIHQGQWLAAYSLGLSRRQTL 132 Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371 R V+ PQA+R +P L++ ++L+K++SL + +L+ II T Q + + L Sbjct: 133 RYVIAPQALRIAVPSLSNSLISLIKDTSLVSVITVTELLRSAQEIIASTYQPLPLYLAAA 192 Query: 372 FIYLSLSIMIALFMNRLNAKIALKEKK 398 +Y L ++ L ++AL + Sbjct: 193 AVYWVLCQILELLQRWYERRLALPSRH 219 >gi|239816391|ref|YP_002945301.1| polar amino acid ABC transporter inner membrane subunit [Variovorax paradoxus S110] gi|239802968|gb|ACS20035.1| polar amino acid ABC transporter, inner membrane subunit [Variovorax paradoxus S110] Length = 217 Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 60/208 (28%), Positives = 104/208 (50%), Gaps = 18/208 (8%) Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALK 241 T+ +A FV +LG++++L R + + +I F G P L+ + L Sbjct: 19 TLALSAIAFVGGAILGLIIALM-----RTSESAWARGVSTTFIQIFQ--GTPLLLQLFL- 70 Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301 + F PVLG ++P +++ +AL +AAF+ EI R + A+PRGQ EAA Sbjct: 71 --VFFGAPVLGL-------DINP-WVAAGVALILNSAAFLGEIWRGCIEAIPRGQWEAAQ 120 Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361 AL L + R V+LPQA++ + P + ++K +SLA +GF ++ G + N T Sbjct: 121 ALNLKYAARMRDVVLPQALKIALAPTVGYVVQIIKGTSLAAIIGFVEVTRAGQVVNNATF 180 Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLN 389 Q + + + IY ++ ++L R+ Sbjct: 181 QPLVVFSVVAAIYFAICWPLSLLAARME 208 >gi|313891667|ref|ZP_07825274.1| putative glutamine ABC transporter, permease protein GlnP [Dialister microaerophilus UPII 345-E] gi|329122023|ref|ZP_08250632.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Dialister micraerophilus DSM 19965] gi|313119945|gb|EFR43130.1| putative glutamine ABC transporter, permease protein GlnP [Dialister microaerophilus UPII 345-E] gi|327467075|gb|EGF12587.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Dialister micraerophilus DSM 19965] Length = 217 Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 41/141 (29%), Positives = 75/141 (53%), Gaps = 1/141 (0%) Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316 +G S +F S IA AA+ AEI R G+ ++ +GQ E A LG + + R ++L Sbjct: 78 LGNSFQMNDFSSAIIAFVANYAAYFAEIFRGGIQSIGKGQYEGAQVLGFNYSQTMRYIIL 137 Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376 PQ ++ ++PPL ++ + LLK++SL + DL+ V +I+ + ++ +F YL Sbjct: 138 PQVVKRVLPPLGNETITLLKDTSLVYILAMNDLMRVTRSIVQRDFDTTAFLVAGVF-YLV 196 Query: 377 LSIMIALFMNRLNAKIALKEK 397 + ++ + L K A+ + Sbjct: 197 CTFVLTKILTWLENKYAVYSE 217 >gi|311107288|ref|YP_003980141.1| ectoine/hydroxyectoine ABC transporter permease EhuC [Achromobacter xylosoxidans A8] gi|310761977|gb|ADP17426.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC [Achromobacter xylosoxidans A8] Length = 217 Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 39/132 (29%), Positives = 75/132 (56%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P + + L+ A+ AE+VR + AVP GQ EA +AL LT + R +++PQA+ ++ Sbjct: 86 PAMLVGIVVLALNAGAYGAEVVRGAIRAVPPGQREAGVALNLTRGQIMRRIVVPQAVPAM 145 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 +PP + + LLKN++L + DL G + ++T + EI + + +Y +++++I Sbjct: 146 LPPAGNLLIELLKNTALVSLITITDLTFRGQLLRSETLRTTEIFTLMLLMYFAVALLITA 205 Query: 384 FMNRLNAKIALK 395 + L K+ ++ Sbjct: 206 GVRLLERKVRVR 217 Score = 38.5 bits (88), Expect = 1.8, Method: Compositional matrix adjust. Identities = 22/61 (36%), Positives = 32/61 (52%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G T + ++ A + G GRLS+ + + WI VYVEVFR LV +F+ Sbjct: 15 LLQGLAVTLEIMAGAVVLAVPLALAAGIGRLSSLRPLRWIAAVYVEVFRGTSALVQLFWF 74 Query: 149 Y 149 Y Sbjct: 75 Y 75 >gi|194292632|ref|YP_002008539.1| ABC transporter, permease protein [Cupriavidus taiwanensis LMG 19424] gi|193226536|emb|CAQ72487.1| putative ABC transporter, permease protein [Cupriavidus taiwanensis LMG 19424] Length = 270 Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 56/190 (29%), Positives = 91/190 (47%), Gaps = 18/190 (9%) Query: 186 NAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLI-----AL 240 N +I VF+ LG V+ L LS H + ++ F P LVL+ Sbjct: 66 NIEISVFAMALGTVVGLVIGALSLSSHAAL-RVFTRTWVQAFR--NAPVLVLVYFTTYVF 122 Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300 ++LH V F F P+++ + + L+ +A +AEI R + ++P Q EAA Sbjct: 123 PFELHL---VHWTFPF-------PDWVKVVLGLALPASANVAEIFRGAIQSIPSAQWEAA 172 Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 +L L R+ RLV+LPQ +R ++PP + Y ++ ++SLA VG D+V N Sbjct: 173 QSLALRRRQIFRLVVLPQCLRRMLPPWMNLYASITMSTSLASLVGVHDVVDTAQVASNTV 232 Query: 361 GQAIEIILIW 370 + IL++ Sbjct: 233 ARTDFTILVY 242 Score = 37.7 bits (86), Expect = 3.2, Method: Compositional matrix adjust. Identities = 25/96 (26%), Positives = 46/96 (47%), Gaps = 13/96 (13%) Query: 84 SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143 ++ A+L G + ++ M T++G ++GA LS++ + R +V+ FRN P LV Sbjct: 54 TWTPALLRGLLANIEISVFAMALGTVVGLVIGALSLSSHAALRVFTRTWVQAFRNAPVLV 113 Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFP 179 +++F + V PF + L + FP Sbjct: 114 LVYFT-------------TYVFPFELHLVHWTFPFP 136 >gi|295095777|emb|CBK84867.1| amino acid ABC transporter membrane protein, PAAT family (TC 3.A.1.3.-) [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 308 Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 37/134 (27%), Positives = 76/134 (56%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 +F + + L+ +A+ AEI+R G + V GQ EAA ALGL + T ++LPQA+R+I+ Sbjct: 146 QFSTAIVGLTLVQSAYTAEIIRGGFLGVDHGQYEAAAALGLPAWRRTVRIILPQALRTIL 205 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 P ++ ++L K +++ + +L I N+T + I ++++ YL ++ +++ Sbjct: 206 PSGFNEIISLAKGTAMVYVLAMPELFYTIQMIYNRTQEVIPLLMVGAVWYLVITTVLSAI 265 Query: 385 MNRLNAKIALKEKK 398 + + +A E++ Sbjct: 266 QHVIERGLARSERR 279 >gi|283796751|ref|ZP_06345904.1| L-cystine ABC transporter, permease protein [Clostridium sp. M62/1] gi|291075637|gb|EFE13001.1| L-cystine ABC transporter, permease protein [Clostridium sp. M62/1] gi|295092596|emb|CBK78703.1| amino acid ABC transporter membrane protein, PAAT family (TC 3.A.1.3.-) [Clostridium cf. saccharolyticum K10] Length = 221 Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 65/222 (29%), Positives = 109/222 (49%), Gaps = 23/222 (10%) Query: 177 SFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV 236 + PT T+ A FV S +L +V++ +F + + +Y+S F G P Sbjct: 16 ALPT-TLSLAAVSFVLSLLLAVVIAGI-----DYFKVPVLRQVCAVYVSFFR--GTP--- 64 Query: 237 LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296 LI + L+F P FI P F + L+ +AA++ E VR L++VP GQ Sbjct: 65 LIPQLFLLYFGIP-----TFIPELRDIPAFAVCIVGLTLNSAAYMKEAVRGALLSVPAGQ 119 Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356 EAA+A G+T +A ++ PQA+R IP L + ++++K +S+A +G ++ + Sbjct: 120 REAALAHGMTPLQAMAHIVFPQAVRVAIPSLFNNLVDIVKGTSMAFTIGVIEITAAANLR 179 Query: 357 INQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 + T + E ++ M +Y +I L + R AL EKK Sbjct: 180 ASVTFRYFEAYMLLMLLYW----VIILVLERAE---ALLEKK 214 >gi|116696424|ref|YP_842000.1| ABC-type transporter, permease component [Ralstonia eutropha H16] gi|113530923|emb|CAJ97270.1| ABC-type transporter, permease component [Ralstonia eutropha H16] Length = 257 Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 51/155 (32%), Positives = 92/155 (59%), Gaps = 11/155 (7%) Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287 L+ +P L+LI + +F P+L G VS E +++ +AL+ AAFIA+ + + Sbjct: 73 LLRAVPVLMLI---FWTYFLLPMLA------GVQVS-EVLTVVLALALVGAAFIAQSLHA 122 Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347 G+ A+ GQ +AA+ALG++ +A V+LPQA+R+++P L + ++ L K++SLA VG + Sbjct: 123 GIAAIGAGQRQAALALGMSRTQALWHVVLPQALRAMLPSLANTWVALTKDTSLAYIVGVS 182 Query: 348 DLVSVGGTIINQT-GQAIEIILIWMFIYLSLSIMI 381 +L ++ + ++ A E+ +Y L +MI Sbjct: 183 ELSTLATQVNGRSMSYAAEVFAAVALLYFVLCVMI 217 >gi|256832192|ref|YP_003160919.1| polar amino acid ABC transporter, inner membrane subunit [Jonesia denitrificans DSM 20603] gi|256685723|gb|ACV08616.1| polar amino acid ABC transporter, inner membrane subunit [Jonesia denitrificans DSM 20603] Length = 279 Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 42/125 (33%), Positives = 71/125 (56%), Gaps = 4/125 (3%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +AL ++A+IAE +R+G+ AVP GQ+EAA +LG++ + V LPQA R ++PP+T++ Sbjct: 150 LALGIVSSAYIAETIRAGIQAVPPGQIEAARSLGMSPMRTMLTVTLPQAFRIVLPPMTNE 209 Query: 331 YLNLLKNSSLAVAVGFA----DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386 + L K++SL +G + DL VG +N + + + YL ++I + Sbjct: 210 LILLTKDTSLVYLLGLSAAAYDLTKVGRDTLNSGIGGLTGLFVVGAAYLCITIPLGFLAR 269 Query: 387 RLNAK 391 L K Sbjct: 270 WLEKK 274 >gi|33152996|ref|NP_874349.1| amino-acid ABC transporter permease protein [Haemophilus ducreyi 35000HP] gi|33149221|gb|AAP96738.1| amino-acid ABC transporter permease protein [Haemophilus ducreyi 35000HP] Length = 238 Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 49/152 (32%), Positives = 82/152 (53%), Gaps = 13/152 (8%) Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282 YIS +I G P LV I++ + + P LG + V P + I S A+ + Sbjct: 76 YIS--IIRGTPMLVQISIVF---YGLPALGFY-------VDP-IPAAIIGFSLNIGAYAS 122 Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342 E VR+ + AVP+GQ EA ++G+T+ + R ++ PQA+R IPPL++ ++ L K++SLA Sbjct: 123 ETVRAAISAVPKGQWEAGYSIGMTYLQTFRRIIAPQAIRVAIPPLSNTFIGLFKDTSLAS 182 Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374 V ++ V + N + + + + FIY Sbjct: 183 VVTVTEMFRVAQQMANMSYDFLPVYIEAAFIY 214 >gi|330821191|ref|YP_004350053.1| amino acid ABC transporter, permease protein [Burkholderia gladioli BSR3] gi|327373186|gb|AEA64541.1| amino acid ABC transporter, permease protein [Burkholderia gladioli BSR3] Length = 223 Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 49/150 (32%), Positives = 78/150 (52%), Gaps = 13/150 (8%) Query: 211 FHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY 270 FH + + + YI F F P +VL+AL Y + P G T+S F ++ Sbjct: 52 FHHRVANLVLIAYIDLFRSF--PVVVLLALIY---YGLPFFG-------ITLS-SFAAVV 98 Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +AL+ + + EI R+G+ +VP GQ EAA +LG + ++LPQA+R+++ PL S Sbjct: 99 LALALNNSGYYGEIFRAGIESVPHGQREAARSLGFGRSREIAYIVLPQAVRNVLAPLASN 158 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 L L K++S+A V +L+ QT Sbjct: 159 TLELFKSTSIASLVSLPELLRSSRVAQEQT 188 >gi|317152558|ref|YP_004120606.1| polar amino acid ABC transporter inner membrane subunit [Desulfovibrio aespoeensis Aspo-2] gi|316942809|gb|ADU61860.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio aespoeensis Aspo-2] Length = 218 Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 37/127 (29%), Positives = 73/127 (57%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +AL + A+IAEI R ++++ GQMEAA +LG+ + +A ++LPQA++ +P L +Q Sbjct: 92 LALGIHNGAYIAEIFRGAIVSISNGQMEAARSLGMPYPRAMLRIILPQALKRAVPSLGNQ 151 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++ LK+SSLA + +L+ + + +E++ I YL + + + RL + Sbjct: 152 FIIALKDSSLASTITINELLLKSQQLASSNFMMMEMLFIAALFYLFYTAIFSWLFRRLES 211 Query: 391 KIALKEK 397 ++ + + Sbjct: 212 RLDVSTQ 218 >gi|229816475|ref|ZP_04446775.1| hypothetical protein COLINT_03528 [Collinsella intestinalis DSM 13280] gi|229807942|gb|EEP43744.1| hypothetical protein COLINT_03528 [Collinsella intestinalis DSM 13280] Length = 286 Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 41/132 (31%), Positives = 76/132 (57%), Gaps = 4/132 (3%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 F L + ++ + +AE+ R+G+ AVPRGQ EAA+ALG++ + ++LPQA+R +I Sbjct: 146 SFWMLALPVALAASGVLAEVFRAGVNAVPRGQTEAALALGMSPFRVKLKIVLPQAIRYVI 205 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 P L SQ + ++K++++A V + D++ +I + L+ IY+ L+ I Sbjct: 206 PSLISQLVVVVKDTTVAYVVSYPDMLQNARVLITNYDALVSTYLVVAVIYILLNYAI--- 262 Query: 385 MNRLNAKIALKE 396 N+L+ +A + Sbjct: 263 -NQLSVYVARRS 273 >gi|146278101|ref|YP_001168260.1| polar amino acid ABC transporter, inner membrane subunit [Rhodobacter sphaeroides ATCC 17025] gi|145556342|gb|ABP70955.1| polar amino acid ABC transporter, inner membrane subunit [Rhodobacter sphaeroides ATCC 17025] Length = 226 Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 62/220 (28%), Positives = 100/220 (45%), Gaps = 33/220 (15%) Query: 182 TMDTNAKIFVFSFVLGIVLSL---FATRLSRHF---HEKTGKALPLLYISTFLIFGLPTL 235 T+ A + LG+VL+ + RL+ F G+ALP L + + FGLP L Sbjct: 31 TIWLAAAVIALGLSLGLVLACLRAYGWRLANFFIICFADMGRALPPLVLILIIYFGLPGL 90 Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295 L P++ L + L AAF EI +GL +VP+G Sbjct: 91 -------GLRVPGPLV-----------------LILVLGTVLAAFAEEIFWAGLTSVPKG 126 Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355 Q EA A GL + + LPQA R +PPL ++ L + K ++L +G ++++SV T Sbjct: 127 QWEAGRATGLGFTQTLIQIALPQAARLALPPLVNRVLAISKMTALGSVIGVSEILSVAST 186 Query: 356 IINQTGQAIEIIL---IWMFIYLSLSIMIALFMNRLNAKI 392 + TG A + + ++ ++L L ++ L R K+ Sbjct: 187 AQSFTGSAAPLTMGAIAYVIVFLPLVVLTRLLERRFAWKV 226 >gi|302554580|ref|ZP_07306922.1| glutamate permease [Streptomyces viridochromogenes DSM 40736] gi|302472198|gb|EFL35291.1| glutamate permease [Streptomyces viridochromogenes DSM 40736] Length = 221 Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 46/121 (38%), Positives = 74/121 (61%) Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335 YT++F+ E +RSG+ VP GQ EAA A+GLT R+ LV+LPQA RS + PL + + L+ Sbjct: 101 YTSSFVCEALRSGINTVPVGQAEAARAIGLTFRQVLGLVVLPQAFRSSVVPLANVLIALI 160 Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395 KN+++A A+G A+ + +I Q + I I F ++ L++ L + + K+A+K Sbjct: 161 KNTTVAAAIGVAEAAVLMKEMIENEAQLLLISAIIAFGFVVLTLPTGLILGWVGKKVAVK 220 Query: 396 E 396 Sbjct: 221 R 221 >gi|163856730|ref|YP_001631028.1| putative amino acid ABC transporter, permease protein [Bordetella petrii DSM 12804] gi|163260458|emb|CAP42760.1| putative amino acid ABC transporter, permease protein [Bordetella petrii] Length = 217 Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 33/134 (24%), Positives = 77/134 (57%), Gaps = 1/134 (0%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P+F + +A + AA+ AEI R+G+++V RGQ E + LG+++ + R ++LPQ ++ + Sbjct: 85 PDFPAAIVAFALNYAAYFAEIFRAGILSVDRGQYEGSKVLGMSYLQTMRRIVLPQMVQRV 144 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 +PP++++ + L+K++SL + D++ I+ + ++ F YL +++++ Sbjct: 145 LPPMSNETITLVKDTSLIYVLALNDILRTARGIVQRDFTTTPFLVAAAF-YLFMTLLLTW 203 Query: 384 FMNRLNAKIALKEK 397 + + A ++ Sbjct: 204 LFQHMEKRYAKYDQ 217 >gi|290891403|ref|ZP_06554464.1| hypothetical protein AWRIB429_1854 [Oenococcus oeni AWRIB429] gi|290479049|gb|EFD87712.1| hypothetical protein AWRIB429_1854 [Oenococcus oeni AWRIB429] Length = 105 Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 37/103 (35%), Positives = 63/103 (61%) Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349 ++V +GQMEAA + GL++ +A R V++PQ MR +P L +Q++ LK++S+ A+G +L Sbjct: 1 MSVDKGQMEAARSNGLSYWQAMRYVVMPQGMRITVPSLINQFIITLKDTSILQAIGLVEL 60 Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 G I+ +T Q +I I IYL + ++ N + +KI Sbjct: 61 TQTGNLIVARTQQGFQIWAIVAIIYLVMITLLTWLSNFVQSKI 103 >gi|293606208|ref|ZP_06688571.1| ectoine/hydroxyectoine ABC superfamily ATP binding cassette transporter, membrane protein [Achromobacter piechaudii ATCC 43553] gi|292815355|gb|EFF74473.1| ectoine/hydroxyectoine ABC superfamily ATP binding cassette transporter, membrane protein [Achromobacter piechaudii ATCC 43553] Length = 223 Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 65/220 (29%), Positives = 110/220 (50%), Gaps = 19/220 (8%) Query: 187 AKIFVFSFVLGI--------VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLI 238 + IF +SF L I V+++ AT L G AL +L S I LPT +I Sbjct: 2 SPIFDWSFALEILPTLGSALVITIEATVLGMLVAVTLGLALAMLRRSRLRIVSLPTAFVI 61 Query: 239 ALKYQLHFDKPVLGQFNFI------GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292 + P+L Q F+ G +SP + +AL + A + AE+ R+G+ AV Sbjct: 62 ----EFIRSTPLLVQMYFLFYVLPLTGVQMSP-LATGIVALGLHYATYCAEVYRAGIEAV 116 Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352 PRGQ EAA AL ++ + V+LPQA+ ++P L + + + K++ L A+ +L+ Sbjct: 117 PRGQWEAATALNMSRWRTAVGVVLPQAIPPVVPALGNYLVAMFKDTPLLSAITVVELLQQ 176 Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 I + T + E + + ++L+LS++ A + L A++ Sbjct: 177 SKMIGSATFRYTEPLTLVGVLFLALSLVAAWGVRGLEARL 216 >gi|317048137|ref|YP_004115785.1| polar amino acid ABC transporter inner membrane subunit [Pantoea sp. At-9b] gi|316949754|gb|ADU69229.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea sp. At-9b] Length = 249 Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 37/116 (31%), Positives = 64/116 (55%) Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 AA++AEI+R G+ A+P+GQ+ AA ALG H R V+ PQ MR I+P L + + LLK Sbjct: 104 AAYLAEIIRGGVQALPKGQINAAKALGFNHLNVARYVIFPQTMRLILPSLGNSFNGLLKT 163 Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393 +S+A + +L+ ++ + +E+ ++ YL L+ + ++ A Sbjct: 164 TSIASVISVEELLRRTQILMQEQFMVLELFMVAATYYLLLTTLWDFIQRKIERHYA 219 Score = 40.8 bits (94), Expect = 0.36, Method: Compositional matrix adjust. Identities = 23/61 (37%), Positives = 32/61 (52%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 I +G VNT L +GM ++G L+ RLS + I R Y+ VFR P LV + + Sbjct: 19 IFMGAVNTVLLTLAGMAGGLVLGILLAFARLSPWSWINQIARAYIWVFRGTPLLVQLIII 78 Query: 149 Y 149 Y Sbjct: 79 Y 79 >gi|256545654|ref|ZP_05473011.1| amino acid ABC superfamily ATP binding cassette transporter, amino acid-binding/permease protein [Anaerococcus vaginalis ATCC 51170] gi|256398630|gb|EEU12250.1| amino acid ABC superfamily ATP binding cassette transporter, amino acid-binding/permease protein [Anaerococcus vaginalis ATCC 51170] Length = 520 Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 39/130 (30%), Positives = 73/130 (56%) Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326 ++ +I +S T A+++E+VR G+ +V GQ EA ALG+TH + V++PQ ++SI+P Sbjct: 379 LAAFIIVSINTGAYLSEVVRGGINSVDEGQFEACKALGMTHSQTMFNVVIPQTIKSILPA 438 Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386 + ++++ +K++S+ + +L V +I T Q + LI IY L+ + + Sbjct: 439 IANEFVVNIKDTSVLNVISVTELFFVSKSIAGSTYQIFQTYLITAIIYFILTFITTRIIL 498 Query: 387 RLNAKIALKE 396 + K KE Sbjct: 499 LIEKKFTNKE 508 >gi|111018891|ref|YP_701863.1| ABC amino acid transporter, permease component [Rhodococcus jostii RHA1] gi|110818421|gb|ABG93705.1| ABC amino acid transporter, permease component [Rhodococcus jostii RHA1] Length = 222 Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 57/202 (28%), Positives = 101/202 (50%), Gaps = 14/202 (6%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 + SF +G+V++L L+R + + Y+S +I G P LV QL Sbjct: 29 IISFTIGLVIALLMA-LARISSIRPLSVIARFYVS--IIRGTPLLV------QLFIVFYA 79 Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 L QF G + P F + IA S + AE++RS ++++P+GQ EAA +G+ + Sbjct: 80 LPQF----GVVLDP-FPAAVIAFSLNVGGYAAEVIRSAILSIPKGQWEAAQTIGMGYTTT 134 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370 + ++LPQA R +PPL++ ++L+K++SLA + +L+ V T + + Sbjct: 135 LQRIVLPQAARVAVPPLSNTLISLVKDTSLASTILVTELLRVAQLAAAPTFDFFALYSVA 194 Query: 371 MFIYLSLSIMIALFMNRLNAKI 392 Y + I ++ RL A++ Sbjct: 195 ALYYWVICIFLSAVQGRLEARL 216 >gi|13474522|ref|NP_106091.1| ABC transporter permease protein [Mesorhizobium loti MAFF303099] gi|14025276|dbj|BAB51877.1| ABC transporter permease protein [Mesorhizobium loti MAFF303099] Length = 224 Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 55/160 (34%), Positives = 86/160 (53%), Gaps = 14/160 (8%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 + S +GI + L + L R + K + L + Y F LP LV++ L Y + P Sbjct: 32 ILSIGIGIPIGLLIS-LVRLYAPKPLRWLAVGYTDIFR--ALPVLVVLILIY---YALPF 85 Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 LG S V+ A + +A+ AE+ RSG+ ++P+GQ EA+ ALGL Sbjct: 86 LGIRLSSWASAVT--------AFAFIMSAYSAEVFRSGIESIPKGQFEASQALGLPFLLT 137 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 R V+LPQA+R +IPP+TS +++ K++SLA V +L+ Sbjct: 138 LRKVVLPQAIRVVIPPMTSNCVSMFKDTSLASTVALPELL 177 Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust. Identities = 23/62 (37%), Positives = 34/62 (54%) Query: 88 AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147 A+L GF+NT L + IG L+ RL A K + W+ Y ++FR +P LVV+ Sbjct: 19 ALLRGFLNTLLLGILSIGIGIPIGLLISLVRLYAPKPLRWLAVGYTDIFRALPVLVVLIL 78 Query: 148 LY 149 +Y Sbjct: 79 IY 80 >gi|323342443|ref|ZP_08082675.1| polar amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Erysipelothrix rhusiopathiae ATCC 19414] gi|322463555|gb|EFY08749.1| polar amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Erysipelothrix rhusiopathiae ATCC 19414] Length = 220 Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 42/149 (28%), Positives = 85/149 (57%), Gaps = 3/149 (2%) Query: 251 LGQFNFIGG---STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307 L F F+G ST P+ + +AL ++A++AEI R+G+ AV +GQ EAA +LG+++ Sbjct: 72 LSLFYFLGSEYISTSVPDVGWIMVALIINSSAYVAEIFRAGIQAVDKGQFEAAKSLGISN 131 Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367 + ++ PQA+++I+P L ++++ ++K +SLA +L++ + + T + + Sbjct: 132 ANMMKKIIFPQAIKNILPALGNEFITMIKETSLASVFFVNNLMTSESIVSSATHLKLPSL 191 Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIALKE 396 +I IY ++ + + K+AL + Sbjct: 192 MIVGVIYFIMTFSTSKLIAAFERKVALND 220 >gi|152995145|ref|YP_001339980.1| polar amino acid ABC transporter inner membrane subunit [Marinomonas sp. MWYL1] gi|150836069|gb|ABR70045.1| polar amino acid ABC transporter, inner membrane subunit [Marinomonas sp. MWYL1] Length = 229 Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 40/120 (33%), Positives = 69/120 (57%) Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 AL A+ E+ R L ++P+GQ EAAIALG+ + ++LPQ R +P L + + Sbjct: 102 ALGLTFGAYATEVFRGALQSIPKGQHEAAIALGMGPIRKFYRIILPQVWRIALPGLGNLF 161 Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 L LLK+++L VG D++ ++ T QA L+ F+YL+L+I+ +F++ + + Sbjct: 162 LVLLKDTALVSVVGLDDIMRKANIAVSSTKQAFLFYLVAAFMYLALTIISMVFVSYMEKR 221 Score = 41.2 bits (95), Expect = 0.30, Method: Compositional matrix adjust. Identities = 23/73 (31%), Positives = 36/73 (49%) Query: 84 SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143 + +L G V T LA S + I+G L + +LS+ ++ WI Y + R IP L+ Sbjct: 6 GFGDQLLQGAVVTLELALSSLFVGLILGLLGASAKLSSIAVIRWIANGYTTIIRGIPELL 65 Query: 144 VIFFLYKSVLSVL 156 + +Y SVL Sbjct: 66 TVLIIYFGATSVL 78 >gi|289178451|gb|ADC85697.1| GluC [Bifidobacterium animalis subsp. lactis BB-12] Length = 228 Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 51/153 (33%), Positives = 79/153 (51%), Gaps = 23/153 (15%) Query: 191 VFSFVLGIVLSLF------ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244 +FS +LG++L + + R + + K +PL I F++ G + L + Sbjct: 32 LFSTILGLILVMMRISPVSSLRKVSAGYVELFKNMPLTIIMVFMVLG--AFAQLKLSFSD 89 Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304 +F Q NF F LS YTAAF+AE +RSG+ VP+GQ EAA A+G Sbjct: 90 NF------QTNF---------FWLAVTGLSLYTAAFVAESLRSGINTVPKGQAEAARAMG 134 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 L ++ L+++PQA+R + PL + + LLKN Sbjct: 135 LNFMQSATLIIMPQAIRGSVAPLGNTLIALLKN 167 >gi|229591500|ref|YP_002873619.1| putative ABC transporter permease [Pseudomonas fluorescens SBW25] gi|229363366|emb|CAY50505.1| putative ABC transporter, permease [Pseudomonas fluorescens SBW25] Length = 330 Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 67/193 (34%), Positives = 97/193 (50%), Gaps = 15/193 (7%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF--DK 248 VFS +LG L+L RLS AL YI F +P L+++ + Y + D Sbjct: 102 VFSIILGTALAL--ARLS---GSPLLAALAWGYIWFFR--SMPALLVLIILYNFAYLYDH 154 Query: 249 PVLG-QFN---FIGGSTVS--PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302 VLG F F STV +F + LS AA+ AEI+R GLI V GQ EAA A Sbjct: 155 IVLGVPFTGVVFAEWSTVDVLSQFTVAVLGLSLMQAAYAAEIIRGGLIGVDAGQHEAAAA 214 Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362 LGL + ++LPQA+RSI+P ++ + L+K +S+ + +L I N+T Sbjct: 215 LGLPASRRIFRIILPQALRSILPSGFNEIIGLVKGTSIVYVLALPELFYTVQVIYNRTQA 274 Query: 363 AIEIILIWMFIYL 375 I ++++ YL Sbjct: 275 VIPLLIVATVWYL 287 >gi|183601789|ref|ZP_02963159.1| permease protein of ABC transporter for glutamate [Bifidobacterium animalis subsp. lactis HN019] gi|219683681|ref|YP_002470064.1| permease protein of ABC transporter for glutamate [Bifidobacterium animalis subsp. lactis AD011] gi|241190713|ref|YP_002968107.1| amino acid ABC transporter permease [Bifidobacterium animalis subsp. lactis Bl-04] gi|241196119|ref|YP_002969674.1| amino acid ABC transporter permease [Bifidobacterium animalis subsp. lactis DSM 10140] gi|183219395|gb|EDT90036.1| permease protein of ABC transporter for glutamate [Bifidobacterium animalis subsp. lactis HN019] gi|219621331|gb|ACL29488.1| permease protein of ABC transporter for glutamate [Bifidobacterium animalis subsp. lactis AD011] gi|240249105|gb|ACS46045.1| ABC-type amino acid transport system permease component [Bifidobacterium animalis subsp. lactis Bl-04] gi|240250673|gb|ACS47612.1| ABC-type amino acid transport system permease component [Bifidobacterium animalis subsp. lactis DSM 10140] gi|295793702|gb|ADG33237.1| ABC-type amino acid transport system permease component [Bifidobacterium animalis subsp. lactis V9] Length = 225 Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 51/153 (33%), Positives = 79/153 (51%), Gaps = 23/153 (15%) Query: 191 VFSFVLGIVLSLF------ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244 +FS +LG++L + + R + + K +PL I F++ G + L + Sbjct: 29 LFSTILGLILVMMRISPVSSLRKVSAGYVELFKNMPLTIIMVFMVLG--AFAQLKLSFSD 86 Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304 +F Q NF F LS YTAAF+AE +RSG+ VP+GQ EAA A+G Sbjct: 87 NF------QTNF---------FWLAVTGLSLYTAAFVAESLRSGINTVPKGQAEAARAMG 131 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 L ++ L+++PQA+R + PL + + LLKN Sbjct: 132 LNFMQSATLIIMPQAIRGSVAPLGNTLIALLKN 164 >gi|226224892|ref|YP_002758999.1| amino acid ABC transporter (permease) [Listeria monocytogenes Clip81459] gi|225877354|emb|CAS06068.1| Putative amino acid ABC transporter (permease) [Listeria monocytogenes serotype 4b str. CLIP 80459] Length = 235 Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 64/208 (30%), Positives = 103/208 (49%), Gaps = 15/208 (7%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 +F F++ I ++L R +H + + + Y+S F P ++ I L Y P+ Sbjct: 31 LFGFIIAIGMTLI-----RMYHVRFLEPIAKFYVSFFR--STPAILHIMLIY---LGIPL 80 Query: 251 LGQF---NFIGGSTVS--PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305 L F +F G + + P + + IALS A++ EI+RSG+IAV GQMEAA ++G Sbjct: 81 LVDFLSKSFGLGISANKIPVVIFVIIALSFTAGAYLTEILRSGIIAVDIGQMEAAYSVGY 140 Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365 TH +A R VLLPQA +P T+ + L +S+A V ++ + + + +E Sbjct: 141 THGQAIRKVLLPQAFMIALPNFTNLCIGFLHTTSIAAIVAVPEITGMATIVASDNYAFLE 200 Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIA 393 + IY L+I+I L IA Sbjct: 201 AFIGAALIYWFLTILIEAINYILEKNIA 228 >gi|182418791|ref|ZP_02950058.1| L-cystine permease protein TcyB [Clostridium butyricum 5521] gi|237667901|ref|ZP_04527885.1| L-cystine transport system permease protein TcyB [Clostridium butyricum E4 str. BoNT E BL5262] gi|182377346|gb|EDT74906.1| L-cystine permease protein TcyB [Clostridium butyricum 5521] gi|237656249|gb|EEP53805.1| L-cystine transport system permease protein TcyB [Clostridium butyricum E4 str. BoNT E BL5262] Length = 213 Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 50/170 (29%), Positives = 82/170 (48%), Gaps = 30/170 (17%) Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPTLVLIALKYQ 243 V S LGI++ L T S + +G + PLL + FGLP + Sbjct: 26 LVLSIPLGIIVGLMRTSKSIILRKISGAYVLIMRGTPLLLQIIVIFFGLPLV-------G 78 Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 + FD+ F S IA + A+ EI R+G+ ++ GQ+EAA L Sbjct: 79 ITFDR-----------------FPSAIIAFTLNYGAYFGEIFRAGIQSIDEGQIEAAEVL 121 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353 G+T + ++LPQA ++++PP+ ++ L+K++SL VG +L+ VG Sbjct: 122 GITPKDTFFRIILPQAFKTVLPPVANEITTLVKDTSLVYIVGMDELLKVG 171 >gi|297203990|ref|ZP_06921387.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces sviceus ATCC 29083] gi|297148546|gb|EFH29017.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces sviceus ATCC 29083] Length = 327 Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 44/130 (33%), Positives = 69/130 (53%), Gaps = 4/130 (3%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + LS AA+ AE+VR G+++V +GQ EAA ALGL R ++ PQA+RSI P +Q Sbjct: 172 VGLSLNEAAYAAEVVRGGILSVDQGQHEAASALGLPKGYQFRKIVFPQALRSITPNYVNQ 231 Query: 331 YLNLLKNSSLAVAVGFADLV----SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386 + L+K++SL V DL S+G T + + +W I S ++ ++ Sbjct: 232 LIGLIKSTSLVFYVSLLDLFGTVQSMGSTYPGDIVPLLLVATVWYLILTSAVSVVQFYVE 291 Query: 387 RLNAKIALKE 396 R A+ A + Sbjct: 292 RHYARGATRS 301 >gi|307727763|ref|YP_003910976.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia sp. CCGE1003] gi|307588288|gb|ADN61685.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. CCGE1003] Length = 248 Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 50/163 (30%), Positives = 81/163 (49%), Gaps = 24/163 (14%) Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286 F+ FGLP+L +H D E + +A++ A+ EIVR Sbjct: 75 FVFFGLPSL-------GIHID-----------------EIQAAILAMTVNLGAYAIEIVR 110 Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346 +G+ ++ RGQ++AA ALGL R+ R V+LPQA+ ++ P L SQ L ++ S++ + Sbjct: 111 AGIDSISRGQVQAAQALGLHGRQVFRYVVLPQALANVFPALLSQVLIVMLGSAVVSQISV 170 Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 DL I ++ ++ E +I YL LSI + +NR Sbjct: 171 PDLTYAANFIQSRNFRSFESYVIITATYLLLSIALRQILNRFG 213 >gi|257790889|ref|YP_003181495.1| polar amino acid ABC transporter, inner membrane subunit [Eggerthella lenta DSM 2243] gi|317488400|ref|ZP_07946954.1| His/Glu/Gln/Arg/opine family amino ABC transporter [Eggerthella sp. 1_3_56FAA] gi|325830513|ref|ZP_08163966.1| putative glutamate/glutamine/aspartate/asparagine transport system permease protein BztB [Eggerthella sp. HGA1] gi|257474786|gb|ACV55106.1| polar amino acid ABC transporter, inner membrane subunit [Eggerthella lenta DSM 2243] gi|316912504|gb|EFV34059.1| His/Glu/Gln/Arg/opine family amino ABC transporter [Eggerthella sp. 1_3_56FAA] gi|325487422|gb|EGC89863.1| putative glutamate/glutamine/aspartate/asparagine transport system permease protein BztB [Eggerthella sp. HGA1] Length = 220 Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 43/134 (32%), Positives = 76/134 (56%), Gaps = 8/134 (5%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P + +A + +T+A +AEIVR GL +VP GQ EAA + G + + L++LPQA+R++ Sbjct: 82 PPIGAAVLAFTLFTSASVAEIVRGGLASVPHGQYEAARSQGFSTVQTYVLIILPQALRNM 141 Query: 324 IPPLTSQYLNLLKNSS-LAVAVGFADLVSVGGTIINQTGQAIEII-------LIWMFIYL 375 +P L SQ++ +K++S L A+ +L+ G ++N +I LI+ + Sbjct: 142 VPALLSQFVTTIKDTSYLWGAMALQELMGRGMILMNSYNSTAQIFAIFGIMALIYFIVCF 201 Query: 376 SLSIMIALFMNRLN 389 +LS ++ + RL Sbjct: 202 TLSQIVRAYQRRLK 215 >gi|153011817|ref|YP_001373030.1| polar amino acid ABC transporter, inner membrane subunit [Ochrobactrum anthropi ATCC 49188] gi|151563705|gb|ABS17201.1| polar amino acid ABC transporter, inner membrane subunit [Ochrobactrum anthropi ATCC 49188] Length = 226 Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 49/138 (35%), Positives = 76/138 (55%), Gaps = 5/138 (3%) Query: 247 DKPVLGQ--FNFIGGSTVSPEFMSLYIALSCYT---AAFIAEIVRSGLIAVPRGQMEAAI 301 + P LGQ F F G T+ + SL A+ T A+ EI+R+G+ A PRGQ EA+ Sbjct: 65 NTPFLGQIFFIFFGLPTLGLKMNSLTAAIVAMTFNLTAYACEIIRAGIEATPRGQFEASD 124 Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361 ALGL + LV++P A + + P +TSQ + +L S+L + A+L V I ++T Sbjct: 125 ALGLKPVQTFFLVVIPPAFQRVWPAMTSQLVIILLASALCSQISVAELSYVANVIASRTF 184 Query: 362 QAIEIILIWMFIYLSLSI 379 + E ++ +YL L+I Sbjct: 185 RNFEAYIVVTILYLFLAI 202 >gi|150015936|ref|YP_001308190.1| polar amino acid ABC transporter, inner membrane subunit [Clostridium beijerinckii NCIMB 8052] gi|149902401|gb|ABR33234.1| polar amino acid ABC transporter, inner membrane subunit [Clostridium beijerinckii NCIMB 8052] Length = 213 Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 54/217 (24%), Positives = 106/217 (48%), Gaps = 38/217 (17%) Query: 183 MDTNAKIFVFSFVL----GIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGL 232 + +IFV + VL G+++++ T S + +G + PLL + FGL Sbjct: 15 LQVTLEIFVLTLVLSIPLGVIIAVMRTSKSLILKQISGIYILIMRGTPLLLQIIVIFFGL 74 Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292 P + + FD+ F + +A + A+ EI R+G+ ++ Sbjct: 75 PLV-------GISFDR-----------------FPAAILAFTLNYGAYFGEIFRAGIESI 110 Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352 GQ+E A LGL+ ++ ++LPQA ++++PP+ ++ L+K++SL VG +L+ + Sbjct: 111 DNGQVEGAKVLGLSSKQTFFRIILPQAFKTVMPPVANEITTLVKDTSLVYVVGMDELLKI 170 Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 G T N+ + ++++ +YL ++IA+F L Sbjct: 171 GKTAANRDVSLVPLLIVGA-VYL---VVIAIFSQVLK 203 >gi|325528848|gb|EGD05896.1| amino acid ABC transporter inner membrane protein [Burkholderia sp. TJI49] Length = 219 Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 42/136 (30%), Positives = 77/136 (56%), Gaps = 1/136 (0%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G T+ P ++ L+ AA+++E +R ++ + RGQ AA +LGLTH + R V+ PQ Sbjct: 81 GITLDPTTAGIF-TLTLNAAAYLSESMRGAILGIGRGQWAAAHSLGLTHVQTLRYVICPQ 139 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378 A+R +P L + ++L+K++SL + +L+ +I T Q + + L IY LS Sbjct: 140 ALRLAVPSLGNTLISLIKDTSLVSVITVTELLRSTQEVIAATFQPLPLYLAAAAIYWVLS 199 Query: 379 IMIALFMNRLNAKIAL 394 +++ R+ +++AL Sbjct: 200 TLLSRLQGRVESRLAL 215 >gi|317130817|ref|YP_004097099.1| polar amino acid ABC transporter inner membrane subunit [Bacillus cellulosilyticus DSM 2522] gi|315475765|gb|ADU32368.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus cellulosilyticus DSM 2522] Length = 224 Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 34/122 (27%), Positives = 73/122 (59%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +A++ A+I+EIVR G+ ++ +GQMEA +LGL+ R+ R ++ PQA + +IPPL +Q Sbjct: 100 VAIAINAGAYISEIVRGGVQSIDKGQMEAGRSLGLSSRQTMRYIIWPQAFKRMIPPLGNQ 159 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++ LK++S+ + ++ + ++ + ++ ++ YL ++I L + R+ Sbjct: 160 FIISLKDTSVFAIISLQEVTFLMRMYVSSSANTLQPYIMLCLAYLIITIPAMLILRRIER 219 Query: 391 KI 392 ++ Sbjct: 220 RL 221 >gi|271502696|ref|YP_003335722.1| polar amino acid ABC transporter inner membrane subunit [Dickeya dadantii Ech586] gi|270346251|gb|ACZ79016.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya dadantii Ech586] Length = 252 Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 48/184 (26%), Positives = 95/184 (51%), Gaps = 10/184 (5%) Query: 177 SFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV 236 ++P + A V S + G++ ++ T L G A LL + +P ++ Sbjct: 17 TYPDGPLGGAALTLVLSLMAGLISAVLGTVLGVALAMLRGWAGGLLAVVLGFFRAIPVIM 76 Query: 237 LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296 LI Y F P++ + PE ++ AL+ +A++A V++G++A+ GQ Sbjct: 77 LIFWTY---FLLPIVFGVDI-------PEITTVVCALALIASAYLAHGVKAGIMAIGLGQ 126 Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356 +A ++LGL + ++LPQA+R ++P +Q+++L+K++SLA VG +L + + Sbjct: 127 WQAGMSLGLGRWQTLWHIVLPQALRMMVPSFINQWISLIKDTSLAYIVGVGELTFLATQV 186 Query: 357 INQT 360 N++ Sbjct: 187 NNRS 190 >gi|304395133|ref|ZP_07377017.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea sp. aB] gi|304357386|gb|EFM21749.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea sp. aB] Length = 308 Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 42/137 (30%), Positives = 76/137 (55%), Gaps = 3/137 (2%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 +F + I L+ AA+ AEI+R G++ V GQ+EAA ALGL+ + T ++LPQA+R+II Sbjct: 146 QFQAAVIGLTLVQAAYSAEIIRGGILGVDHGQVEAASALGLSATRRTFRIILPQALRAII 205 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI---WMFIYLSLSIMI 381 P ++ ++L K +S+ + +L I N+ + I ++++ W I ++ +I Sbjct: 206 PVAFNEIISLAKGTSVVYVLAMPELFYTIQMIYNRNQEVIPLLMVGAAWYLIITTVLSVI 265 Query: 382 ALFMNRLNAKIALKEKK 398 R A+ +E + Sbjct: 266 QYNAERWMARSVTREPQ 282 >gi|296156735|ref|ZP_06839573.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. Ch1-1] gi|295893334|gb|EFG73114.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. Ch1-1] Length = 220 Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 51/185 (27%), Positives = 92/185 (49%), Gaps = 19/185 (10%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSC- 275 K + L Y+ L+ +P L+L+ L + F P LG IG S ++ +A+ C Sbjct: 51 KPVALAYVE--LVRNIPYLILVYLSF---FGLPKLG----IGASAMT-------VAIGCT 94 Query: 276 --YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333 YT + +EI+R+ L +VPRGQ +A+++LG+T + R V+ PQ + PP TS + Sbjct: 95 VFYTGGYFSEILRAALRSVPRGQTQASLSLGMTFWQTQRHVIAPQLFGYVTPPTTSLVIM 154 Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393 + K+S++ + ++ + T +E++ IY S+++A RL I Sbjct: 155 MFKDSAIFSVMSLPEMTYQSNLLTANTFAYVEVLGTTALIYWICSVLLASVGRRLETAIG 214 Query: 394 LKEKK 398 + + Sbjct: 215 RRARH 219 >gi|288555859|ref|YP_003427794.1| ABC transporter permease [Bacillus pseudofirmus OF4] gi|288547019|gb|ADC50902.1| ABC transporter (permease) [Bacillus pseudofirmus OF4] Length = 218 Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 37/109 (33%), Positives = 66/109 (60%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F++ +A ++A+++EI+R+G+ AV +GQ EAA ALG+ R ++LPQA R+I+P Sbjct: 88 FLAGVLAFGLNSSAYVSEIIRAGIQAVDKGQKEAAAALGIPERPMMIRIILPQAFRNILP 147 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374 L ++++NL K S++ +G D++ + Q + E +L IY Sbjct: 148 ALFNEFINLTKESAIVSIIGVWDIMRRAQMVNAQIYKYFEALLFVGLIY 196 >gi|154248468|ref|YP_001419426.1| polar amino acid ABC transporter, inner membrane subunit [Xanthobacter autotrophicus Py2] gi|154162553|gb|ABS69769.1| polar amino acid ABC transporter, inner membrane subunit [Xanthobacter autotrophicus Py2] Length = 473 Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 31/81 (38%), Positives = 56/81 (69%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + ++ + +A++AE+VR GL A+P+GQ E A+A+GL RLV+LPQA++ +IP + + Sbjct: 341 VGVALFASAYMAEVVRGGLQAIPKGQYEGAMAVGLPSSLMLRLVVLPQALKLVIPGIVNN 400 Query: 331 YLNLLKNSSLAVAVGFADLVS 351 ++ L K+++L + V DL+ Sbjct: 401 FIGLFKDTTLVLIVSIFDLLG 421 >gi|330891011|gb|EGH23672.1| glutamine ABC transporter, permease protein [Pseudomonas syringae pv. mori str. 301020] Length = 246 Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 41/133 (30%), Positives = 74/133 (55%), Gaps = 10/133 (7%) Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286 +++ G+P L++I Y F P+L N G F ++ L Y +A++ EI+R Sbjct: 69 YVMRGIPLLMVIFWTY---FLVPLLIGHNITG-------FTTMLCTLVVYQSAYLCEIIR 118 Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346 + A+P GQ EA+ +LG+ + + T V+LPQA+ + +P L SQ+++++K +SL + Sbjct: 119 GAIQALPAGQYEASRSLGMGYMRTTVWVILPQALYNALPSLISQFISIIKETSLGYVINV 178 Query: 347 ADLVSVGGTIINQ 359 ++ I NQ Sbjct: 179 QEVTFAANQINNQ 191 >gi|330430556|gb|AEC21890.1| polar amino acid ABC transporter inner membrane subunit [Pusillimonas sp. T7-7] Length = 226 Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 38/131 (29%), Positives = 74/131 (56%), Gaps = 4/131 (3%) Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320 ++ +S +A S AAF AEI+R+G++ + RGQ AA +LG+T + R ++LPQA Sbjct: 92 SIDIRLVSAMVAFSLLEAAFFAEIIRAGILGLSRGQFYAARSLGMTPYQTMRYIILPQAF 151 Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL----S 376 ++++P + +Q + + +++SL + D +I + G I+++L +Y + Sbjct: 152 KAMLPIMLTQCIVIFQDTSLVYVIALGDFFRNAVSIGERDGTLIQMLLFAGLVYWVICST 211 Query: 377 LSIMIALFMNR 387 LSI++ + R Sbjct: 212 LSIVVKMVQQR 222 >gi|302554579|ref|ZP_07306921.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces viridochromogenes DSM 40736] gi|302472197|gb|EFL35290.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces viridochromogenes DSM 40736] Length = 298 Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 61/207 (29%), Positives = 109/207 (52%), Gaps = 23/207 (11%) Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFN 255 LG VL + RLS H + A+ + + + +P LVL+ + G Sbjct: 85 LGAVLGI--ARLSDHAWVRVPAAVVVEFFRS-----IPVLVLM-----------IFGLAL 126 Query: 256 FIGGSTVSPEFMSLY---IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312 F + VS + LY L Y A+ +AEIVR+G++++P+GQ EAA A+GL + R Sbjct: 127 FAQYTNVSSDDRPLYAVVTGLVLYNASVLAEIVRAGILSLPQGQGEAAKAIGLRKGQLMR 186 Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV-GFADLVSVGGTIINQTG-QAIEIILIW 370 L+LLPQA+ +++P + SQ + ++K+++L AV +++L+S T+ G I + Sbjct: 187 LILLPQAVTAMLPAIVSQLVVIVKDTALGGAVLTYSELLSSANTMSGYYGANVIASFTVV 246 Query: 371 MFIYLSLSIMIALFMNRLNAKIALKEK 397 I+++L+ + F + L ++ +K Sbjct: 247 AVIFIALNFALTSFASWLERRLRRAKK 273 >gi|222109009|ref|YP_002551275.1| hypothetical protein Arad_14101 [Agrobacterium radiobacter K84] gi|221727931|gb|ACM30981.1| conserved hypothetical protein [Agrobacterium radiobacter K84] Length = 232 Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 64/201 (31%), Positives = 104/201 (51%), Gaps = 18/201 (8%) Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239 T+ + A I + LG+ + L A RL+ A+ +YIS F G P LV + Sbjct: 22 TIYISVVAMIIAAALGLGLSVMLQANRLT--------AAIARVYISFFR--GTPVLVQLL 71 Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299 + Y F P L F +SP ++ I L +TAA++AEI R+ L AV GQ EA Sbjct: 72 IIY---FGLPQL----FPAALGISP-VNAVIIGLGLHTAAYLAEIFRAALAAVGPGQKEA 123 Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359 A+++GLT +A V+ QA+R IPP + ++ L+KNSSLA +G ++++ + ++ Sbjct: 124 ALSIGLTPVQAFTDVVARQAIRHAIPPTGNIFIGLVKNSSLAFTLGVTEVLAQSKLLASE 183 Query: 360 TGQAIEIILIWMFIYLSLSIM 380 + E +Y + +I+ Sbjct: 184 NLKFFEAYFAAGLVYWAFTIL 204 >gi|114327541|ref|YP_744698.1| Gln/Arg/Lys/His-binding protein and permease [Granulibacter bethesdensis CGDNIH1] gi|114315715|gb|ABI61775.1| gln/Arg/Lys/His-binding protein and permease protein [Granulibacter bethesdensis CGDNIH1] Length = 503 Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 48/133 (36%), Positives = 70/133 (52%), Gaps = 24/133 (18%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 + PLL F+ +GLP L G + P F + +AL Sbjct: 342 RGTPLLIQVLFVFYGLPNL-----------------------GIRLDPFFAGV-LALGLN 377 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 AA+ AE R+GL AVP GQ EAAIAL +T +A R V++PQA R +IP +T+ +++ LK Sbjct: 378 YAAYEAENYRAGLGAVPHGQYEAAIALNMTSFQALRHVVIPQAFRLVIPVMTNDFISALK 437 Query: 337 NSSLAVAVGFADL 349 +SSL + ++L Sbjct: 438 DSSLLSVITLSEL 450 >gi|27381510|ref|NP_773039.1| ABC transporter permease [Bradyrhizobium japonicum USDA 110] gi|27354678|dbj|BAC51664.1| blr6398 [Bradyrhizobium japonicum USDA 110] Length = 216 Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 57/191 (29%), Positives = 95/191 (49%), Gaps = 15/191 (7%) Query: 207 LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG-QFNFIGGSTVSPE 265 L R K ++L +++ F G P L+ + L Y + PVLG N Sbjct: 40 LLRTAERKWVRSLAAMFVDFFQ--GTPMLMQLFLVY---YGLPVLGFHVNV--------- 85 Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 +++ I L+ + +AF+ EI R G++AVPRGQMEAA ALGL + V+LPQA R + Sbjct: 86 WVAASIGLTLHASAFLGEIWRGGIMAVPRGQMEAASALGLGYTSRMIDVVLPQAFRLSLA 145 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 P + L+K +SLA +GF +L + + T + + + Y +L ++ + Sbjct: 146 PTVGFLVQLIKGTSLASIIGFVELSRSAQIVASTTYRPLLAYGMAGLCYFALCFPLSRYS 205 Query: 386 NRLNAKIALKE 396 + L ++A + Sbjct: 206 STLERRLATRS 216 >gi|239945339|ref|ZP_04697276.1| putative glutamate ABC transporter permease protein [Streptomyces roseosporus NRRL 15998] gi|239991796|ref|ZP_04712460.1| putative glutamate ABC transporter permease protein [Streptomyces roseosporus NRRL 11379] gi|291448801|ref|ZP_06588191.1| glutamate transporter permease [Streptomyces roseosporus NRRL 15998] gi|291351748|gb|EFE78652.1| glutamate transporter permease [Streptomyces roseosporus NRRL 15998] Length = 298 Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 64/214 (29%), Positives = 101/214 (47%), Gaps = 42/214 (19%) Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI---FGLPTLVLI 238 T+ A V S LG VL++ RLS H L +IST L+ +P LV+I Sbjct: 84 TLKAFAYAAVLSLALGAVLAV--GRLSEHRV--------LRWISTLLVEFFRAMPVLVMI 133 Query: 239 -----ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293 ALK Q +L L+ Y + +AE+ R+G+ AV Sbjct: 134 FFIFVALKVQ---------------------PLPALVAGLTLYNGSVLAEVFRTGINAVD 172 Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353 RGQ EAA ALG+ + T VL PQA+R+++P + SQ + LK++SL + + + + G Sbjct: 173 RGQREAAYALGMRKTQVTAYVLAPQAVRAMLPTIISQLVVALKDTSLGYLITYEEFLHAG 232 Query: 354 GTIINQTGQAIEIILIWMF---IYLSLSIMIALF 384 I + + I + M IY+ + ++++ F Sbjct: 233 KLIASNLDYDLPFIPVVMVISPIYIGMCMLLSWF 266 Score = 43.9 bits (102), Expect = 0.040, Method: Compositional matrix adjust. Identities = 21/50 (42%), Positives = 35/50 (70%), Gaps = 1/50 (2%) Query: 110 IGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIP 159 +G ++ GRLS ++++ WI + VE FR +P LV+IFF++ + L V P+P Sbjct: 98 LGAVLAVGRLSEHRVLRWISTLLVEFFRAMPVLVMIFFIFVA-LKVQPLP 146 >gi|223041401|ref|ZP_03611605.1| amino-acid ABC transporter permease [Actinobacillus minor 202] gi|223017791|gb|EEF16197.1| amino-acid ABC transporter permease [Actinobacillus minor 202] Length = 227 Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 58/213 (27%), Positives = 109/213 (51%), Gaps = 26/213 (12%) Query: 191 VFSFVLGIVLS-----LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH 245 V SF++G++++ + T ++ H + A+ +YIS +I G P LV I++ + Sbjct: 29 VASFIIGMIIAVGVALIRVTPVNGVLH-RIALAIVKVYIS--IIRGTPMLVQISVVF--- 82 Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305 + P +G F + P + I S A+ +E VR+ + +VP+GQ EA +G+ Sbjct: 83 YGLPAIGVF-------IDP-IPAAIIGFSLNIGAYASETVRAAISSVPKGQWEAGFTIGM 134 Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365 T+ + R ++ PQA+R +PPL++ ++ L K++SLA V ++ V + N + + Sbjct: 135 TYMQTFRRIIAPQAVRVAVPPLSNTFIGLFKDTSLASXVTVTEMFRVAQQMANMSYDFLP 194 Query: 366 I-----ILIWMFIYLSLSIMIALFM--NRLNAK 391 + ++ W F ++ I L + NR AK Sbjct: 195 VYIEAGLIYWCFCWVLFYIQAKLEIRFNRFVAK 227 >gi|209546985|ref|YP_002278903.1| polar amino acid ABC transporter inner membrane protein [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209538229|gb|ACI58163.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 248 Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 48/160 (30%), Positives = 84/160 (52%), Gaps = 10/160 (6%) Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGS----TVSPEFMSLYIALSCYTAAFI 281 T+ G P LV + L Y +GQ F+ S + F +IA + +AA Sbjct: 57 TYAFRGTPLLVQLFLIYY------GIGQLPFVRQSFLWAVMREPFWCAFIAFTLNSAAHT 110 Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341 E++R G+ VP GQ+EAA ALGL+ RL++ P A+R +P ++ + +LK SSLA Sbjct: 111 TEVLRGGIQTVPLGQIEAAKALGLSRLHVMRLIVFPLAIRIALPAYVNEVIGMLKASSLA 170 Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 + ++ + ++++T E+ ++ +YL L+++I Sbjct: 171 STITLLEITGIARQLVSETFAPYEVFIVAGSLYLLLTLII 210 >gi|325964968|ref|YP_004242874.1| amino acid ABC transporter membrane protein, PAAT family [Arthrobacter phenanthrenivorans Sphe3] gi|323471055|gb|ADX74740.1| amino acid ABC transporter membrane protein, PAAT family [Arthrobacter phenanthrenivorans Sphe3] Length = 262 Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 41/132 (31%), Positives = 79/132 (59%), Gaps = 5/132 (3%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IALS +A+I EI R+G+ +V +GQ EA ALG+T+ K+ LV++PQ +R ++P L +Q Sbjct: 106 IALSLIASAYIGEIFRAGIQSVDKGQGEACRALGMTYGKSMALVVIPQGIRRVLPALVNQ 165 Query: 331 YLNLLKNSSLAVAVGF----ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386 ++ ++K+SSL +G +L VG +G +++ +F YL +++ + +N Sbjct: 166 FIAIVKDSSLVYFLGLLVSERELFRVGQDAAVLSGNLSPLVMAGVF-YLIITVPLTHLVN 224 Query: 387 RLNAKIALKEKK 398 +++ +++ Sbjct: 225 YFDSRFRAGKRR 236 >gi|302337868|ref|YP_003803074.1| polar amino acid ABC transporter inner membrane subunit [Spirochaeta smaragdinae DSM 11293] gi|301635053|gb|ADK80480.1| polar amino acid ABC transporter, inner membrane subunit [Spirochaeta smaragdinae DSM 11293] Length = 216 Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 51/158 (32%), Positives = 82/158 (51%), Gaps = 13/158 (8%) Query: 247 DKPVLGQFNFIG------GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300 P+L Q FI G V+P ++S IA S T A++ EI R GL + +GQ AA Sbjct: 62 STPLLVQLYFIYYGLPLLGIQVNP-YVSSVIAFSLNTGAYVVEIFRGGLEGIDKGQFYAA 120 Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 +LG+ R ++ PQ ++ +I PL SQ+ L+K++SLA + +L + + T Sbjct: 121 YSLGMGWFACLRYIIFPQVLQRVIAPLLSQFSYLIKDTSLAAVLVVQELTYTYRNVSSST 180 Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 + +E ++I M IY L I+ L A ++ + KK Sbjct: 181 YRPMEALVIPMIIYFLLYIVFRL------ASMSFETKK 212 >gi|259502042|ref|ZP_05744944.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus antri DSM 16041] gi|259170006|gb|EEW54501.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus antri DSM 16041] Length = 488 Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 53/169 (31%), Positives = 84/169 (49%), Gaps = 17/169 (10%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 V + V G++L + K A+ I ++ G+P +VL Y Sbjct: 303 VLALVFGLILGVLGV-----MQSKVANAISSTVI--YIFRGIPMIVLAFFIY-------- 347 Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 +G N IG P F++ + L A+I IV+ G AV GQ EAA +LGL +RKA Sbjct: 348 MGLPNVIGHKV--PLFLAGVVTLMLDEGAYIGAIVKGGFNAVDPGQWEAARSLGLPYRKA 405 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359 V+ PQ ++ ++P L +Q++ LK++S+ A+G +L G II+Q Sbjct: 406 LIKVVAPQGIKIMVPSLVNQFIITLKDTSILSAIGVMELTQTGTVIISQ 454 >gi|317052939|ref|YP_004119293.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea sp. At-9b] gi|316953266|gb|ADU72737.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea sp. At-9b] Length = 221 Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 50/146 (34%), Positives = 82/146 (56%), Gaps = 12/146 (8%) Query: 234 TLVLIALKYQLHFDKPVLG--QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291 T VLI L + ++ PVL QF+ G + +AL+ YTAA+ +EI R+GL + Sbjct: 67 TPVLIQLIW-FYYAFPVLVGIQFSTFGAAA---------LALTLYTAAYSSEIFRAGLQS 116 Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 + RGQ E A ALG++ A R ++LPQ R ++P LT++ + L K +SLA + +L+ Sbjct: 117 IERGQWEGAKALGMSRPVALRRIILPQVFRRMLPALTNRMIELAKVTSLASILTVNELMY 176 Query: 352 VGGTIINQTGQAIEIILIWMFIYLSL 377 G + + + +EI+ + +Y L Sbjct: 177 QGRLLSSTYYRPVEILTVVALLYFVL 202 Score = 36.2 bits (82), Expect = 8.9, Method: Compositional matrix adjust. Identities = 17/43 (39%), Positives = 26/43 (60%) Query: 107 ATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 TIIG ++G R ++ + + I R VEVFRN P L+ + + Y Sbjct: 35 GTIIGLILGMARTNSRRWIMVITRSVVEVFRNTPVLIQLIWFY 77 >gi|258645925|ref|ZP_05733394.1| amino acid ABC transporter, permease protein [Dialister invisus DSM 15470] gi|260403294|gb|EEW96841.1| amino acid ABC transporter, permease protein [Dialister invisus DSM 15470] Length = 225 Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 49/189 (25%), Positives = 91/189 (48%), Gaps = 15/189 (7%) Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244 T +I + S + ++ LF T L + K + Y+ I +P LVL+ + Y Sbjct: 24 TTVEISLLSVIGSVIFGLF-TGLFMTLQNRAAKLISRFYLEFIRI--MPQLVLLFIAY-- 78 Query: 245 HFDKPVLGQFNFIGGSTVS-PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 F +S F + I + AA + ++VR LI++P+ Q E+A AL Sbjct: 79 ---------FGITRAFGISLSGFTASVIVFILWGAAEMGDLVRGALISIPKSQYESAEAL 129 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363 GL+ R+ R +++PQ++R ++PP + + ++K +SL V +G +++ G II Sbjct: 130 GLSRRQMYRFIIIPQSLRRLLPPAINLFTRIIKTTSLVVLIGVVEMLKTGQQIIEANRYT 189 Query: 364 IEIILIWMF 372 +W++ Sbjct: 190 APDAALWIY 198 >gi|226324098|ref|ZP_03799616.1| hypothetical protein COPCOM_01876 [Coprococcus comes ATCC 27758] gi|225207647|gb|EEG90001.1| hypothetical protein COPCOM_01876 [Coprococcus comes ATCC 27758] Length = 247 Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 55/187 (29%), Positives = 103/187 (55%), Gaps = 12/187 (6%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQF-NFIGGST-----VSPEFMSLY 270 K L +YIS +I G P LV + Y +F P+L ++ NF G+ V+P + + Sbjct: 54 KQLVSIYIS--VIRGTPILVQL---YVTYFGIPMLLKYINFKCGTNYNVNGVAP-IVYAF 107 Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +AL+ +AF AEI+R+ L +V +GQ+EAA ALG+ + +A ++LP+A+ +P L + Sbjct: 108 VALALNESAFNAEIIRASLESVDKGQVEAASALGMNYFQALIRIILPEAIVVALPSLGNA 167 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++ L+K +SLA ++ + G + + + E+ + IY ++ ++ ++ L Sbjct: 168 FIGLIKGTSLAFVCSVVEMTAEGKILAGRNYRYFEVYISLAIIYWVITFVLERVISYLEK 227 Query: 391 KIALKEK 397 K+ + E Sbjct: 228 KLRVPED 234 >gi|260461008|ref|ZP_05809257.1| polar amino acid ABC transporter, inner membrane subunit [Mesorhizobium opportunistum WSM2075] gi|259033042|gb|EEW34304.1| polar amino acid ABC transporter, inner membrane subunit [Mesorhizobium opportunistum WSM2075] Length = 221 Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 37/111 (33%), Positives = 68/111 (61%) Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326 M+ +ALS + A+ EI+R+G+ A+P GQ+EAA +LGL + R V+L A R++ P Sbjct: 91 MAAVVALSIHLGAYATEILRAGIEAIPEGQIEAAKSLGLGRYRIIRHVVLVPAARAVYPS 150 Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377 L++Q++ + +S+ A+ +L +V ++ QT ++ E+ ++ IY L Sbjct: 151 LSAQFILQIMGTSIVGAIAAEELTAVANNLVMQTFRSFEVYIVIAIIYFVL 201 Score = 37.7 bits (86), Expect = 3.2, Method: Compositional matrix adjust. Identities = 21/64 (32%), Positives = 34/64 (53%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G T LA ++ T IG L GR + ++W YVE+ RN P L+ ++F+ Sbjct: 17 LLRGLEKTIQLAALSILFGTAIGILGAVGRSFGPRFLSWTIAAYVELIRNTPLLIQLYFV 76 Query: 149 YKSV 152 + S+ Sbjct: 77 FFSL 80 >gi|254994369|ref|ZP_05276559.1| amino acid ABC transporter, permease protein [Listeria monocytogenes FSL J2-064] Length = 235 Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 61/196 (31%), Positives = 100/196 (51%), Gaps = 15/196 (7%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 +F F++ I ++L R +H + + + Y+S F P ++ I L Y P+ Sbjct: 31 LFGFIIAIGMTLI-----RMYHVRFLEPIAKFYVSFFR--STPAILHIMLIY---LGIPL 80 Query: 251 LGQF---NFIGGSTVS--PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305 L F +F G + + P + + IALS A++ EI+RSG+IAV GQMEAA ++G Sbjct: 81 LVDFLSKSFGLGISANKIPVVIFVIIALSFTAGAYLTEILRSGIIAVDIGQMEAAYSVGY 140 Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365 TH +A R VLLPQA +P T+ + L +S+A V ++ + + + +E Sbjct: 141 THGQAIRKVLLPQAFMIALPNFTNLCIGFLHTTSIAAIVAVPEITGMATIVASDNYAFLE 200 Query: 366 IILIWMFIYLSLSIMI 381 + IY L+I+I Sbjct: 201 AFIGAALIYWFLTILI 216 >gi|239833764|ref|ZP_04682092.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD [Ochrobactrum intermedium LMG 3301] gi|239821827|gb|EEQ93396.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD [Ochrobactrum intermedium LMG 3301] Length = 230 Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 55/186 (29%), Positives = 93/186 (50%), Gaps = 28/186 (15%) Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239 T+T+ A F + VLG+V +L L R S + I PT V++ Sbjct: 28 TVTLKAAATGFAIALVLGLVFAL----LRR---------------SPYKIISWPTTVVV- 67 Query: 240 LKYQLHFDKPVLGQFNFIGG-----STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294 + D P+L Q F+ V P F++ +AL +A+ +E+ R G+ A+PR Sbjct: 68 ---EFLRDTPLLVQLFFLYYVLPVYGIVLPAFLTGALALGLQYSAYTSEVYRGGIEAIPR 124 Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354 GQ EAA AL LT + R +++PQA+ IIP + + +++LK + + V D++++ Sbjct: 125 GQWEAARALNLTPWRTYRDIVIPQAIPRIIPAMGNYLVSMLKETPVLSVVSIVDMLNLAN 184 Query: 355 TIINQT 360 I ++T Sbjct: 185 LIGDRT 190 Score = 41.2 bits (95), Expect = 0.31, Method: Compositional matrix adjust. Identities = 33/91 (36%), Positives = 48/91 (52%), Gaps = 10/91 (10%) Query: 80 TSDSSYATAIL----VGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEV 135 +S S+A +IL +G T A +G A ++G + R S K+++W V VE Sbjct: 10 SSTLSFAISILPILAIGLTVTLKAAATGFAIALVLGLVFALLRRSPYKIISWPTTVVVEF 69 Query: 136 FRNIPPLVVIFFLYKSVLSVLPIPDHSIVLP 166 R+ P LV +FFLY VLP+ + IVLP Sbjct: 70 LRDTPLLVQLFFLYY----VLPV--YGIVLP 94 >gi|153011888|ref|YP_001373101.1| polar amino acid ABC transporter, inner membrane subunit [Ochrobactrum anthropi ATCC 49188] gi|151563776|gb|ABS17272.1| polar amino acid ABC transporter, inner membrane subunit [Ochrobactrum anthropi ATCC 49188] Length = 222 Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 46/131 (35%), Positives = 68/131 (51%), Gaps = 5/131 (3%) Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322 SP FM + I L AF E R+ + ++P Q +A +ALGL TR ++LPQA+R+ Sbjct: 88 SPVFMGVLI-LGMNQTAFNGEAFRAAIQSIPAAQRDAGVALGLGRWNYTRYIVLPQAIRT 146 Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI--- 379 P L + + + + SSL VG ADL+ G + QT + IE YL ++I Sbjct: 147 ATPVLITNAIGIFQQSSLVALVGVADLMYQGKQLSTQTYRPIETFTFLAAFYLVVAIPFG 206 Query: 380 -MIALFMNRLN 389 + A F +RL Sbjct: 207 RLAAFFEHRLE 217 >gi|319780067|ref|YP_004139543.1| polar amino acid ABC transporter inner membrane subunit [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317165955|gb|ADV09493.1| polar amino acid ABC transporter, inner membrane subunit [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 269 Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 48/172 (27%), Positives = 88/172 (51%), Gaps = 6/172 (3%) Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY----IALSCYTAAFIAE 283 +I G P L+ + L Y + + Q+ +I S + P + +AL+ A + E Sbjct: 98 VIRGTPLLIQLWLLY--YGLGSLFPQYPWIRESWMWPYLRQAWPYGVLALTLSFAGYEGE 155 Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343 ++R VP+GQ+EAA A G++ KA R + LPQA+ +P LT + + LK++ L Sbjct: 156 VMRGAFAGVPKGQLEAARAFGMSRWKAFRRIWLPQAIYRALPTLTGETVLQLKSTPLVAT 215 Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395 + D+ +V + T E +L+ IY++++ ++ +R+ A+I K Sbjct: 216 ISVIDIFAVSSKVRQDTYLTYEPLLLLALIYMTITGILVFAFSRIEARIPNK 267 >gi|300856061|ref|YP_003781045.1| putative amino acid ABC transporter permease [Clostridium ljungdahlii DSM 13528] gi|300436176|gb|ADK15943.1| predicted ABC-type aminoacid transporter, permease component [Clostridium ljungdahlii DSM 13528] Length = 221 Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 63/239 (26%), Positives = 112/239 (46%), Gaps = 35/239 (14%) Query: 160 DHSIVLPFGMF-LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKA 218 D +I F MF + RGL +T++ FS +LG V++ F R+++ K Sbjct: 2 DFNIEYFFSMFPVILRGL---PITVEVAGASLFFSVILGFVIAAF-----RYYNIPMLKQ 53 Query: 219 LPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFN--FIGGSTVS------PEFMSLY 270 L +++S F P + Q + G + VS P F + Sbjct: 54 LSTVFVSFFR------------------STPFIAQLFVFYYGIAQVSKLVKNMPSFWATI 95 Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I LS AA+++E +R + +V +GQ EA I++GL+ + +++PQA+R IP + + Sbjct: 96 IVLSLSFAAYMSEDIRGAITSVDKGQFEAGISIGLSSWQTVYRIIIPQAVRVAIPGMMNS 155 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 + NL K++SL VG D+++ N + + +E + + IY + I+ +RL Sbjct: 156 FANLFKSTSLCFIVGLKDMIAYCKNEANVSFRYLEGYMAVLIIYWIILSSISYLQSRLE 214 >gi|171740988|ref|ZP_02916795.1| hypothetical protein BIFDEN_00050 [Bifidobacterium dentium ATCC 27678] gi|283455623|ref|YP_003360187.1| ABC transporter permease [Bifidobacterium dentium Bd1] gi|171276602|gb|EDT44263.1| hypothetical protein BIFDEN_00050 [Bifidobacterium dentium ATCC 27678] gi|283102257|gb|ADB09363.1| Permease protein of ABC transporter system [Bifidobacterium dentium Bd1] Length = 220 Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 55/184 (29%), Positives = 93/184 (50%), Gaps = 14/184 (7%) Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252 SFV+G+ L++ A L R + + Y+ F G P LV + + + F P +G Sbjct: 31 SFVVGLALAI-AVALVRVAKVPVIQRIAQFYVWVFR--GTPLLVQL---FVIFFGLPSVG 84 Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312 V P F S IA S A+ +E +R ++AVP+GQ+EA + L + R Sbjct: 85 --------IVVPAFPSAIIAFSLNVGAYASETLRGAILAVPKGQIEAGLTTNLNYLTIMR 136 Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372 L++LPQA +S P L + +++L+K++SLA + A++ I+ T + + + Sbjct: 137 LIVLPQAFKSAFPALFNTFISLVKDTSLAANITVAEMFMAAQRIVATTYEPLVLYCEVGL 196 Query: 373 IYLS 376 IYL+ Sbjct: 197 IYLA 200 >gi|116072944|ref|ZP_01470206.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Synechococcus sp. RS9916] gi|116068249|gb|EAU74001.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Synechococcus sp. RS9916] Length = 340 Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 41/98 (41%), Positives = 62/98 (63%), Gaps = 8/98 (8%) Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342 E VR GL ++P Q EAA ALGL+ ++ RLV+LPQA+R IP LT+Q + LL+N+SL Sbjct: 220 EDVRGGLQSIPSTQTEAAAALGLSPIQSLRLVVLPQALRIAIPALTNQAIGLLQNTSLMA 279 Query: 343 AVGFADLVSVGGTIINQT---GQAIEII-----LIWMF 372 +G +L+ +G +++ G+ +E+ L WMF Sbjct: 280 LLGLVELLGIGRSLLANPAFIGRHLEVYVWLGGLYWMF 317 >gi|37676942|ref|NP_937338.1| arginine transporter permease subunit ArtQ [Vibrio vulnificus YJ016] gi|37201486|dbj|BAC97308.1| ABC-type arginine transport system, permease component [Vibrio vulnificus YJ016] Length = 229 Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 46/130 (35%), Positives = 75/130 (57%), Gaps = 1/130 (0%) Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321 VSP F+S IALS A++ ++ +R L AV +GQ EAA ALG++ + ++LPQA+R Sbjct: 87 VSP-FLSGVIALSLIFASYASQTIRGALKAVNKGQREAASALGMSKSRTFFRIVLPQAVR 145 Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 +P LT+Q+L LLK+++L +G DL+ T +A IYL ++++ Sbjct: 146 HALPGLTNQWLVLLKDTALVSLIGVTDLLKQAQLTSAATHEAFTWYATAAAIYLVITLVT 205 Query: 382 ALFMNRLNAK 391 + ++AK Sbjct: 206 QRVVKIIDAK 215 >gi|116670530|ref|YP_831463.1| polar amino acid ABC transporter inner membrane subunit [Arthrobacter sp. FB24] gi|116610639|gb|ABK03363.1| amino acid ABC transporter membrane protein, PAAT family [Arthrobacter sp. FB24] Length = 262 Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 41/132 (31%), Positives = 78/132 (59%), Gaps = 5/132 (3%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IALS +A+I EI R+G+ +V RGQ EA ALG+++ K+ LV++PQ +R ++P L +Q Sbjct: 106 IALSLIASAYIGEIFRAGIQSVDRGQGEACRALGMSYAKSMALVVVPQGIRRVLPALVNQ 165 Query: 331 YLNLLKNSSLAVAVGF----ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386 ++ ++K+SSL +G +L VG +G +++ +F YL +++ + +N Sbjct: 166 FIAIVKDSSLVYFLGLLVTERELFRVGQDAAVLSGNLSPLVMAGIF-YLIITVPLTHLVN 224 Query: 387 RLNAKIALKEKK 398 +++ ++ Sbjct: 225 YFDSRFRTGRRR 236 >gi|46908517|ref|YP_014906.1| amino acid ABC transporter, permease protein [Listeria monocytogenes str. 4b F2365] gi|47092445|ref|ZP_00230235.1| amino acid ABC transporter, permease protein [Listeria monocytogenes str. 4b H7858] gi|254825078|ref|ZP_05230079.1| amino acid ABC transporter [Listeria monocytogenes FSL J1-194] gi|254854299|ref|ZP_05243647.1| amino acid ABC transporter [Listeria monocytogenes FSL R2-503] gi|254933325|ref|ZP_05266684.1| amino acid ABC transporter [Listeria monocytogenes HPB2262] gi|300763905|ref|ZP_07073901.1| amino acid ABC transporter, permease protein [Listeria monocytogenes FSL N1-017] gi|46881789|gb|AAT05083.1| amino acid ABC transporter, permease protein [Listeria monocytogenes serotype 4b str. F2365] gi|47019222|gb|EAL09965.1| amino acid ABC transporter, permease protein [Listeria monocytogenes str. 4b H7858] gi|258607691|gb|EEW20299.1| amino acid ABC transporter [Listeria monocytogenes FSL R2-503] gi|293584886|gb|EFF96918.1| amino acid ABC transporter [Listeria monocytogenes HPB2262] gi|293594321|gb|EFG02082.1| amino acid ABC transporter [Listeria monocytogenes FSL J1-194] gi|300515246|gb|EFK42297.1| amino acid ABC transporter, permease protein [Listeria monocytogenes FSL N1-017] gi|328465382|gb|EGF36629.1| amino acid ABC transporter, permease protein [Listeria monocytogenes 1816] gi|328471566|gb|EGF42446.1| amino acid ABC transporter, permease protein [Listeria monocytogenes 220] Length = 235 Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 64/208 (30%), Positives = 103/208 (49%), Gaps = 15/208 (7%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 +F F++ I ++L R +H + + + Y+S F P ++ I L Y P+ Sbjct: 31 LFGFIIAIGMTLI-----RMYHVRFLEPIAKFYVSFFR--STPAILHIMLIY---LGIPL 80 Query: 251 LGQF---NFIGGSTVS--PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305 L F +F G + + P + + IALS A++ EI+RSG+IAV GQMEAA ++G Sbjct: 81 LVDFLSKSFGLGISANKIPVVIFVIIALSFTAGAYLTEILRSGIIAVDIGQMEAAYSVGY 140 Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365 TH +A R VLLPQA +P T+ + L +S+A V ++ + + + +E Sbjct: 141 THGQAIRKVLLPQAFMIALPNFTNLCIGFLHTTSIAAIVAVPEITGMATIVASDNYAFLE 200 Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIA 393 + IY L+I+I L IA Sbjct: 201 AFIGAALIYWFLTILIEAINYILEKNIA 228 >gi|329766946|ref|ZP_08258474.1| hypothetical protein HMPREF0428_00171 [Gemella haemolysans M341] gi|328837671|gb|EGF87296.1| hypothetical protein HMPREF0428_00171 [Gemella haemolysans M341] Length = 214 Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 33/92 (35%), Positives = 57/92 (61%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IA + AA+ AEI R G+ ++P+GQ EAA L T + R V+LPQ ++ ++P + ++ Sbjct: 89 IAFTLNYAAYFAEIFRGGIDSIPKGQYEAAKVLKFTQFQTIRFVILPQVIKIVLPSVFNE 148 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362 ++L+K++SL A+G +DL+ T N+ Sbjct: 149 IMSLVKDTSLVYALGISDLILASRTAANRDAS 180 >gi|326384496|ref|ZP_08206176.1| polar amino acid ABC transporter inner membrane subunit [Gordonia neofelifaecis NRRL B-59395] gi|326196841|gb|EGD54035.1| polar amino acid ABC transporter inner membrane subunit [Gordonia neofelifaecis NRRL B-59395] Length = 227 Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 40/99 (40%), Positives = 59/99 (59%), Gaps = 9/99 (9%) Query: 259 GSTVSPE---------FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309 G T++PE F +A YTA F+ E +RSG VP GQ EAA +LGL+ + Sbjct: 80 GLTLAPENSSFIATNNFRLAVLAFILYTATFVCETLRSGFNTVPIGQAEAARSLGLSFTQ 139 Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348 L++LPQA+R++I PL S + L KN+++A +G A+ Sbjct: 140 VFGLIVLPQALRTVIAPLGSVLIALTKNTTIASVIGVAE 178 >gi|170741315|ref|YP_001769970.1| polar amino acid ABC transporter inner membrane subunit [Methylobacterium sp. 4-46] gi|168195589|gb|ACA17536.1| polar amino acid ABC transporter, inner membrane subunit [Methylobacterium sp. 4-46] Length = 227 Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 45/115 (39%), Positives = 69/115 (60%), Gaps = 1/115 (0%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +AL+ A+ EIVR+GL A+PRGQ+EAA L L+ + R V+L A+ + P LTSQ Sbjct: 95 LALTINVGAYTTEIVRAGLDAIPRGQIEAAEGLALSRAQIYRHVVLLPAIERVYPSLTSQ 154 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS-IMIALF 384 ++ L+ SS+ + +L +V I + T +A E ++ IY++LS IM A F Sbjct: 155 FVLLMLASSVTSQISAEELTAVANYIQSDTYRAFETYIVVALIYVALSFIMRAGF 209 Score = 37.7 bits (86), Expect = 3.4, Method: Compositional matrix adjust. Identities = 23/55 (41%), Positives = 30/55 (54%), Gaps = 6/55 (10%) Query: 99 LAFSGMIPATIIGTLVGA----GRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 L SG+ AT +G +G GR S + + +C VYVE RN P LV IF +Y Sbjct: 25 LELSGI--ATAVGGALGGITAIGRRSRHAALRRLCEVYVEAIRNTPLLVQIFLVY 77 >gi|257387737|ref|YP_003177510.1| polar amino acid ABC transporter inner membrane subunit [Halomicrobium mukohataei DSM 12286] gi|257170044|gb|ACV47803.1| polar amino acid ABC transporter, inner membrane subunit [Halomicrobium mukohataei DSM 12286] Length = 338 Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 59/207 (28%), Positives = 111/207 (53%), Gaps = 12/207 (5%) Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252 S VLG+ +++ ++R + + + L Y T L+ G P L+A + L++ P+ Sbjct: 130 SMVLGLAIAV-PLSVARVYGGRIVGTVSLAY--TELVRGTP---LLAQLFLLYYGLPLAE 183 Query: 253 QFNFIG--GSTVSPEFMSLYIALSCYT---AAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307 + +G G P ++++A+ +T +A+ AE +R L +V GQ+ AA ++GL+ Sbjct: 184 EIEGLGLVGEGAVPR-AAVFVAIVGFTINSSAYQAEYIRGALQSVDSGQLVAARSIGLSK 242 Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367 R V+LPQ +R IP T++++ L+K SSLA + +L I + + + + Sbjct: 243 AAGIRHVVLPQGLRYAIPGWTNEFVYLIKYSSLAAFITVPELFRQARIIASDSFRVTDTY 302 Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIAL 394 ++ +YL+L + AL M+RL A +A+ Sbjct: 303 VVVAVLYLALVLTTALAMDRLEAAVAV 329 >gi|170748628|ref|YP_001754888.1| binding-protein-dependent transport systems inner membrane component [Methylobacterium radiotolerans JCM 2831] gi|170655150|gb|ACB24205.1| binding-protein-dependent transport systems inner membrane component [Methylobacterium radiotolerans JCM 2831] Length = 231 Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 37/97 (38%), Positives = 59/97 (60%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 PE ++ ALS A+++ V SG+ +V RGQ EA +ALGL + R V+LPQA+R++ Sbjct: 94 PEAGTVAAALSLVGGAYLSYGVASGIASVGRGQWEAGLALGLGPWRTLRFVILPQALRAM 153 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 P +Q+ L+K++SLA +G +L V + N+ Sbjct: 154 APSFVNQWTTLIKDTSLAYVIGVPELSFVAAQVNNRA 190 >gi|290473509|ref|YP_003466378.1| putative amino acid ABC transporter membrane protein [Xenorhabdus bovienii SS-2004] gi|289172811|emb|CBJ79582.1| putative amino acid transport protein (ABC superfamily, membrane) [Xenorhabdus bovienii SS-2004] Length = 250 Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 53/172 (30%), Positives = 91/172 (52%), Gaps = 14/172 (8%) Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252 +F LGI L F L R + K A+ Y+ +LI G P LV + L + + P +G Sbjct: 46 TFALGISLG-FIVALIRLYGSKPLVAVVRFYV--WLIRGTPLLVQLFL---IFYALPSVG 99 Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312 F S I + A+ +E++R+ LI+VP+GQ EA+ ++G++ ++ R Sbjct: 100 --------ITLEAFTSAVIGFTLNVGAYTSEVIRAALISVPKGQWEASHSIGMSWWQSLR 151 Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364 ++LPQA R IPPL++ +++L+K++SLA + ++ I T Q + Sbjct: 152 RIVLPQAARVSIPPLSNTFISLVKDTSLASVITVPEMFLAAQRIAAVTYQPL 203 >gi|289671885|ref|ZP_06492775.1| amino acid ABC transporter permease [Pseudomonas syringae pv. syringae FF5] Length = 306 Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 65/192 (33%), Positives = 96/192 (50%), Gaps = 15/192 (7%) Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF--DKP 249 FS +LG L+L RLS AL YI F +P L+++ + Y + D Sbjct: 74 FSIILGTALAL--ARLS---GSPLLAALAWGYIWFFR--SMPALLVLIILYNFAYLYDHI 126 Query: 250 VLG----QFNFIGGSTVS--PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 VLG Q F STV +F + LS +A+ AEI+R GLI V GQ EAA AL Sbjct: 127 VLGVPFTQLVFAEWSTVDVLSQFTVAVLGLSLMQSAYTAEIIRGGLIGVDAGQHEAAAAL 186 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363 GL + ++LPQA+RSI+P ++ + L+K +S+ + +L I N+T Sbjct: 187 GLPVSRRIFRIILPQALRSILPSGFNEIIGLVKGTSIVYVLALPELFYTVQVIYNRTQAV 246 Query: 364 IEIILIWMFIYL 375 I ++++ YL Sbjct: 247 IPLLIVATVWYL 258 >gi|260430199|ref|ZP_05784173.1| ABC transporter permease protein [Citreicella sp. SE45] gi|260418671|gb|EEX11927.1| ABC transporter permease protein [Citreicella sp. SE45] Length = 221 Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 49/158 (31%), Positives = 83/158 (52%), Gaps = 8/158 (5%) Query: 243 QLHFDKPVLGQ-------FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295 +L D PVL Q F + G +SP +L + L+ T+A+ +EI R G+ ++ RG Sbjct: 62 ELFRDTPVLIQLIWFYYAFPILVGVQLSPYAAAL-LGLTLNTSAYASEIFRGGIRSIHRG 120 Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355 QME A+A+G++ +A R V+LPQ ++ ++ T++ + + K SSLA + +L+ G Sbjct: 121 QMEGALAIGMSRAQAMRRVILPQVIKRMLAAFTNRTIEVAKMSSLASVISVHELMYQGRL 180 Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393 + + + EI+ FIY L RL +A Sbjct: 181 LSSTYYRPFEILTAVAFIYFVLIYPGTFLAGRLEKHLA 218 >gi|222086405|ref|YP_002544939.1| amino acid ABC transporter [Agrobacterium radiobacter K84] gi|221723853|gb|ACM27009.1| amino acid ABC transporter [Agrobacterium radiobacter K84] Length = 219 Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 52/160 (32%), Positives = 83/160 (51%), Gaps = 9/160 (5%) Query: 227 FLIFGLPTLVLIALKY--QLHFDKPVLGQF--NFIG----GSTVSPEFMSLYIALSCYTA 278 FL G + IA+KY +L P+L Q F G G V P +++ +AL +++ Sbjct: 40 FLRIGKNKVARIAVKYFVELFQGTPLLMQLFLAFFGLGLFGIDV-PAWLAAAVALILWSS 98 Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338 AF+ EI R + AV +GQ EA+ +L + + + R V+LPQA+R +PP + ++K + Sbjct: 99 AFLIEIWRGCVEAVAKGQWEASASLAMGYMQQMRYVILPQALRIAVPPTVGFSVQVVKGT 158 Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378 +L +GF +L G I N T Q + IY +L Sbjct: 159 ALTSIIGFVELSKAGTIITNATFQPFTVYGFVALIYFALC 198 >gi|153010123|ref|YP_001371337.1| polar amino acid ABC transporter, inner membrane subunit [Ochrobactrum anthropi ATCC 49188] gi|151562011|gb|ABS15508.1| polar amino acid ABC transporter, inner membrane subunit [Ochrobactrum anthropi ATCC 49188] Length = 510 Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 48/144 (33%), Positives = 81/144 (56%), Gaps = 7/144 (4%) Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291 LP LVL+ Y L PVL + +S F + IAL A++AEI R GL+A Sbjct: 67 LPLLVLLIFIYSLPQVFPVLR-------TLLSNAFAAGLIALVISETAYMAEIHRGGLLA 119 Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 + +GQ+EA ALGL+ RL+++PQA+R +P ++++ + ++K +SL + A+++ Sbjct: 120 IHKGQIEAGRALGLSFLGIQRLIVVPQAIRVSLPAMSNELVTIVKLTSLVSVISLAEILL 179 Query: 352 VGGTIINQTGQAIEIILIWMFIYL 375 VG + Q +E + + F Y+ Sbjct: 180 VGQRLYTQNFLVLETLTVVAFFYV 203 >gi|325528178|gb|EGD05363.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. TJI49] Length = 500 Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 45/137 (32%), Positives = 78/137 (56%), Gaps = 4/137 (2%) Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321 +SP F + + L+ AAF AE++R G++AV +GQ+EAA ALGL + T ++LPQAMR Sbjct: 163 ISP-FAAAVLGLTLNHAAFSAEVIRGGILAVDQGQLEAAAALGLPRGRQTVRIVLPQAMR 221 Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL---IWMFIYLSLS 378 +I+P + ++L K +S+ + +L I + + I +++ +W I L+ Sbjct: 222 AILPTAFNDLISLAKGTSMVYVLAMPELFYTVQVIYRRNLEVIPLLMVATVWYLIILTAL 281 Query: 379 IMIALFMNRLNAKIALK 395 I + + R A+ AL+ Sbjct: 282 SAIQVQIERHYARGALR 298 >gi|259046528|ref|ZP_05736929.1| amino acid ABC superfamily ATP binding cassette transporter, amino acid-binding protein/permease protein [Granulicatella adiacens ATCC 49175] gi|259036693|gb|EEW37948.1| amino acid ABC superfamily ATP binding cassette transporter, amino acid-binding protein/permease protein [Granulicatella adiacens ATCC 49175] Length = 259 Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 34/134 (25%), Positives = 77/134 (57%), Gaps = 1/134 (0%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G + F +++I +S T A+++EIVR G+I++ +GQ EA+ A+G+TH + R V+ PQ Sbjct: 95 GINLDVTFAAIFI-VSINTGAYMSEIVRGGIISIDQGQFEASQAIGMTHWQTMRYVVFPQ 153 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378 +R+I+P + ++++ +K++S+ + ++L T+ Q + + + + +Y ++ Sbjct: 154 VLRNILPAVGNEFVINIKDTSVLNVISVSELYFATKTVAGQNFRYFDTFFVTLILYFIMT 213 Query: 379 IMIALFMNRLNAKI 392 + + K+ Sbjct: 214 FTVTRILRYFERKL 227 >gi|322411344|gb|EFY02252.1| hypothetical protein SDD27957_02870 [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957] Length = 215 Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 31/73 (42%), Positives = 51/73 (69%) Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 A + +T+A +AEI+R GL AV GQ EA ++ G TH + RL++ PQA R ++P + SQ+ Sbjct: 87 AFTVFTSAALAEIIRGGLNAVNHGQTEAGLSQGFTHFQVFRLIIFPQAFRKMLPAIISQF 146 Query: 332 LNLLKNSSLAVAV 344 + ++K++SL +V Sbjct: 147 VTVIKDTSLLYSV 159 >gi|317049797|ref|YP_004117445.1| polar amino acid ABC transporter inner membrane subunit [Pantoea sp. At-9b] gi|316951414|gb|ADU70889.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea sp. At-9b] Length = 366 Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 36/96 (37%), Positives = 59/96 (61%) Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315 F+ T + + + + + +A++AE+VR GL A+P+GQ EAA +L L + K LV+ Sbjct: 220 FMAEGTTIDKLVRALVGVILFQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQILVI 279 Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 LPQA++ IP L + + L K++SL + +G DL S Sbjct: 280 LPQALKLTIPGLVNTIIALFKDTSLVIIIGLFDLFS 315 >gi|172063855|ref|YP_001811506.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria MC40-6] gi|171996372|gb|ACB67290.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria MC40-6] Length = 225 Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 47/128 (36%), Positives = 69/128 (53%), Gaps = 4/128 (3%) Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282 Y T + G+P +++ + Y F L F G +SP F + IAL+ A+ + Sbjct: 52 YALTNFLRGIPEFLILLICY---FGLSHLLNAQFDGAIVISP-FSAGVIALAVVFGAYSS 107 Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342 E+ R IAVP GQ+EAA A G+T + V LPQA R +P L + + NLLK++SL Sbjct: 108 EMFRGAFIAVPAGQIEAARAYGMTRLQTLWYVRLPQAWRICLPSLNNMWQNLLKDTSLVS 167 Query: 343 AVGFADLV 350 VG D++ Sbjct: 168 IVGLEDML 175 >gi|223983007|ref|ZP_03633216.1| hypothetical protein HOLDEFILI_00495 [Holdemania filiformis DSM 12042] gi|223965053|gb|EEF69356.1| hypothetical protein HOLDEFILI_00495 [Holdemania filiformis DSM 12042] Length = 519 Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 31/77 (40%), Positives = 58/77 (75%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 ++ + IAL ++A++AEI+RSG+ AV +GQ EAA +LG+++R ++LPQA+++I+ Sbjct: 388 KYACVVIALVFNSSAYVAEIIRSGIQAVDKGQSEAAKSLGMSNRHMMMKIILPQAVKNIL 447 Query: 325 PPLTSQYLNLLKNSSLA 341 P L ++++ ++K +SLA Sbjct: 448 PALGNEFVTMIKETSLA 464 >gi|300690980|ref|YP_003751975.1| glutamine transporter subunit ; membrane component of ABC superfamily [Ralstonia solanacearum PSI07] gi|299078040|emb|CBJ50682.1| glutamine transporter subunit ; membrane component of ABC superfamily [Ralstonia solanacearum PSI07] Length = 218 Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 38/101 (37%), Positives = 60/101 (59%) Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 + A+IAEIVR ++VPRG EA +ALG+ + V+ P A+R + PPL +Q++ LK Sbjct: 100 SGAYIAEIVRGAFLSVPRGLKEAGLALGMPAWRVLAFVIGPVALRRMTPPLGNQFIVSLK 159 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377 ++SL + +G +L G I+ +A+EI IYL + Sbjct: 160 DTSLFIVIGVGELTRQGQEIMASNFRAVEIWSAVAVIYLCM 200 >gi|319762274|ref|YP_004126211.1| polar amino acid abc transporter, inner membrane subunit [Alicycliphilus denitrificans BC] gi|330825796|ref|YP_004389099.1| polar amino acid ABC transporter inner membrane subunit [Alicycliphilus denitrificans K601] gi|317116835|gb|ADU99323.1| polar amino acid ABC transporter, inner membrane subunit [Alicycliphilus denitrificans BC] gi|329311168|gb|AEB85583.1| polar amino acid ABC transporter, inner membrane subunit [Alicycliphilus denitrificans K601] Length = 266 Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 38/116 (32%), Positives = 68/116 (58%) Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 TAA +AE+ R+G++AVPRGQ +AA +LGLT + LV+ PQA+R I+P L +Q + ++K Sbjct: 150 TAAVVAEVYRAGVLAVPRGQTDAARSLGLTEAQVFFLVVFPQALRYIVPALVAQLVIVVK 209 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 +++ V + +L+ +I + + L+ +Y ++ I+ RL + Sbjct: 210 DTTFGYVVTYGELMQNAKVLIANYHALVPVYLVVAALYCLVNYAISRASKRLGGPM 265 >gi|320333845|ref|YP_004170556.1| polar amino acid ABC transporter inner membrane subunit [Deinococcus maricopensis DSM 21211] gi|319755134|gb|ADV66891.1| polar amino acid ABC transporter, inner membrane subunit [Deinococcus maricopensis DSM 21211] Length = 219 Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 68/211 (32%), Positives = 105/211 (49%), Gaps = 16/211 (7%) Query: 185 TNAKIFVFSFVLGIVLSL---FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALK 241 T A+I V V ++L L F L R + L LY+S I G P LV I Sbjct: 16 TGARITVLYAVGAMLLGLPLAFLVALGRSAPWPPVRWLLDLYVS--FIRGTPLLVQI--- 70 Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301 + L++ P LG T+ P S ALS AA+++ +R+ L AV RGQ EAA Sbjct: 71 FVLYYGLPGLG-------VTLDP-VTSGVAALSLNVAAYMSVTIRASLDAVGRGQREAAR 122 Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361 +LGL+ + R V+LPQA+R +P L + + L+K++SL + +L+ +I +T Sbjct: 123 SLGLSSSQTMRFVVLPQALRIGLPSLMNSLIGLIKDTSLVSVITVTELLRSAQLVIARTF 182 Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 + L IY +S ++ L +RL ++ Sbjct: 183 EPFGPYLAAALIYWLISSLLGLVQSRLERRL 213 >gi|256957248|ref|ZP_05561419.1| amino acid ABC transporter [Enterococcus faecalis DS5] gi|257077778|ref|ZP_05572139.1| his/Glu/Gln/Arg/opine ABC transporter permease [Enterococcus faecalis JH1] gi|294781304|ref|ZP_06746650.1| ABC transporter, permease protein [Enterococcus faecalis PC1.1] gi|307267969|ref|ZP_07549357.1| ABC transporter, permease protein [Enterococcus faecalis TX4248] gi|256947744|gb|EEU64376.1| amino acid ABC transporter [Enterococcus faecalis DS5] gi|256985808|gb|EEU73110.1| his/Glu/Gln/Arg/opine ABC transporter permease [Enterococcus faecalis JH1] gi|294451640|gb|EFG20096.1| ABC transporter, permease protein [Enterococcus faecalis PC1.1] gi|306515610|gb|EFM84137.1| ABC transporter, permease protein [Enterococcus faecalis TX4248] gi|315032477|gb|EFT44409.1| ABC transporter, permease protein [Enterococcus faecalis TX0017] gi|315034288|gb|EFT46220.1| ABC transporter, permease protein [Enterococcus faecalis TX0027] gi|323480074|gb|ADX79513.1| his/Glu/Gln/Arg/opine amino ABC transporter [Enterococcus faecalis 62] Length = 487 Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 39/112 (34%), Positives = 72/112 (64%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IALS + A++AEI+R+G+ AV +GQ+EAA +LG+ +A R ++ PQA+++I+P L ++ Sbjct: 362 IALSLNSGAYVAEIIRAGIQAVNKGQLEAARSLGMNQNQAMRYIIFPQAIKNILPALGNE 421 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382 ++ ++K SS+ +G ++L+ G + + + LI IY L+ I+ Sbjct: 422 FVTVIKESSVVSVIGVSELIFQAGNVQGASFKPFLPYLIVSLIYFVLTFTIS 473 Score = 38.1 bits (87), Expect = 2.3, Method: Compositional matrix adjust. Identities = 26/80 (32%), Positives = 40/80 (50%), Gaps = 5/80 (6%) Query: 70 FEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWIC 129 F+ DQ + Y L G T +LAF G++ I+G L+ +L+ +K++ I Sbjct: 270 FQKDQSFL-----QKYGKFYLNGAGYTIFLAFIGVLFGAILGALLALMKLANSKILRGIA 324 Query: 130 RVYVEVFRNIPPLVVIFFLY 149 Y+E R P LV IF +Y Sbjct: 325 IAYIEYVRGTPLLVQIFIVY 344 >gi|154483128|ref|ZP_02025576.1| hypothetical protein EUBVEN_00829 [Eubacterium ventriosum ATCC 27560] gi|149735936|gb|EDM51822.1| hypothetical protein EUBVEN_00829 [Eubacterium ventriosum ATCC 27560] Length = 229 Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 64/233 (27%), Positives = 114/233 (48%), Gaps = 24/233 (10%) Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFV----FSFVLGIVLSLFATRLSRHFHEKTGKALP 220 +P M L L M KIFV FS G+V++ R+SR K K L Sbjct: 14 MPMNMMLEKMSLG-----MIETVKIFVLTLLFSLPFGLVVAW--GRMSRI---KIVKWLV 63 Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280 +YIS ++ G P ++ + ++F L + + F ++ I+ AA+ Sbjct: 64 NIYIS--IMRGTPLMLQVM---AIYFGPSYLLKIQI----SRDYRFYAVIISFVLNYAAY 114 Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340 AEI RSG+ ++PRGQ EAA LG + ++LPQ ++ I+P +T++ + L+K++SL Sbjct: 115 FAEIYRSGIESMPRGQYEAANMLGYNKAQTFMKIILPQVIKRILPSITNEVICLVKDTSL 174 Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393 A ++ + ++ S+ I + T + +F Y + ++A M + K++ Sbjct: 175 AFSIAYMEMFSIAKQIASSTSSLTPFFVAGVF-YFVFNALVAWIMGLIEKKLS 226 >gi|315145819|gb|EFT89835.1| ABC transporter, permease protein [Enterococcus faecalis TX2141] Length = 487 Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 39/112 (34%), Positives = 72/112 (64%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IALS + A++AEI+R+G+ AV +GQ+EAA +LG+ +A R ++ PQA+++I+P L ++ Sbjct: 362 IALSLNSGAYVAEIIRAGIQAVNKGQLEAARSLGMNQNQAMRYIIFPQAIKNILPALGNE 421 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382 ++ ++K SS+ +G ++L+ G + + + LI IY L+ I+ Sbjct: 422 FVTVIKESSVVSVIGVSELIFQAGNVQGASFKPFLPYLIVSLIYFVLTFTIS 473 Score = 37.7 bits (86), Expect = 3.0, Method: Compositional matrix adjust. Identities = 23/67 (34%), Positives = 35/67 (52%) Query: 83 SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142 Y L G T +LAF G++ I+G L+ +L+ +K++ I Y+E R P L Sbjct: 278 QKYGKFYLNGAGYTIFLAFIGVLFGAILGALLALMKLANSKILRGIAIAYIEYVRGTPLL 337 Query: 143 VVIFFLY 149 V IF +Y Sbjct: 338 VQIFIVY 344 >gi|325067175|ref|ZP_08125848.1| amino acid ABC transporter membrane protein [Actinomyces oris K20] gi|326771648|ref|ZP_08230933.1| glutamate permease [Actinomyces viscosus C505] gi|326637781|gb|EGE38682.1| glutamate permease [Actinomyces viscosus C505] Length = 218 Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 42/115 (36%), Positives = 66/115 (57%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P F S+ +AL ++ F+ E VRSG+ +VP+GQ+EAA ALG+ R ++LPQA+ Sbjct: 82 PLFWSVIVALVFSSSGFVCETVRSGINSVPKGQIEAARALGMPFGLIIRGIVLPQALART 141 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378 I PL + ++ L SSLA A+G +L +V I + + L YL+++ Sbjct: 142 IQPLVNIFIACLIGSSLAAAIGVVELTAVTQRINQERAAGVITFLTSGLTYLAIA 196 >gi|269795725|ref|YP_003315180.1| amino acid ABC transporter membrane protein [Sanguibacter keddieii DSM 10542] gi|269097910|gb|ACZ22346.1| amino acid ABC transporter membrane protein [Sanguibacter keddieii DSM 10542] Length = 285 Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 59/177 (33%), Positives = 92/177 (51%), Gaps = 22/177 (12%) Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL-VLIAL 240 T+ A F LGIVL+L +LS + L YI F G+P L V+IA Sbjct: 80 TLTYTAAAFAVGLSLGIVLALM--KLS---SVGVYRWLATAYIEFFR--GIPALLVVIAF 132 Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300 Y + G ++ + +AL +AA+IAE +R+G+ AVP GQ+EAA Sbjct: 133 AYAVPIAL----------GVSIPSLTLKAALALGMVSAAYIAETLRAGIEAVPPGQIEAA 182 Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA----DLVSVG 353 +LG++H + V++PQA R ++PP+T++ + L K++SL +G DL +G Sbjct: 183 RSLGMSHSRTLVTVVIPQAFRIVLPPMTNEIILLTKDTSLIYLMGLLPTQFDLTKIG 239 >gi|227530661|ref|ZP_03960710.1| ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus vaginalis ATCC 49540] gi|227349442|gb|EEJ39733.1| ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus vaginalis ATCC 49540] Length = 225 Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 63/213 (29%), Positives = 111/213 (52%), Gaps = 20/213 (9%) Query: 185 TNAKIFVFSFVLGIVL-SLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243 T+ I V S +G++L ++F L R + + + LLY+ F I +PT+VL+ L Y Sbjct: 24 TSVWIAVVSLAIGLLLGTIFG--LLRTLPSRIIRFILLLYLEFFRI--VPTVVLLFLVYY 79 Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 + + QFN + +M++ +A S + AA ++IVR L +VP+ Q E+ +AL Sbjct: 80 I-----LPRQFNV----NLPATWMAV-LAFSLWVAAEFSDIVRGALESVPKHQRESGLAL 129 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363 GL + R VLLPQA++ +P + ++K +SL + + D+++VG II Q Sbjct: 130 GLNQWQLFRYVLLPQAIQLELPATINLATRVIKTTSLLLMISVMDVINVGQQIIEANNQT 189 Query: 364 IEIILIWMF-----IYLSLSIMIALFMNRLNAK 391 + W++ +Y + ++L+ L AK Sbjct: 190 HPTGIFWVYGLIFILYFIVDYPLSLWAKHLTAK 222 >gi|227517812|ref|ZP_03947861.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus faecalis TX0104] gi|229546739|ref|ZP_04435464.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus faecalis TX1322] gi|229548830|ref|ZP_04437555.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus faecalis ATCC 29200] gi|255971345|ref|ZP_05421931.1| amino acid ABC transporter [Enterococcus faecalis T1] gi|256617763|ref|ZP_05474609.1| amino acid ABC transporter [Enterococcus faecalis ATCC 4200] gi|256761649|ref|ZP_05502229.1| amino acid ABC transporter [Enterococcus faecalis T3] gi|256854261|ref|ZP_05559625.1| amino acid ABC transporter [Enterococcus faecalis T8] gi|256960019|ref|ZP_05564190.1| arpJ [Enterococcus faecalis Merz96] gi|256964286|ref|ZP_05568457.1| arpJ [Enterococcus faecalis HIP11704] gi|257081138|ref|ZP_05575499.1| amino acid-binding/permease [Enterococcus faecalis E1Sol] gi|257083807|ref|ZP_05578168.1| amino acid ABC transporter [Enterococcus faecalis Fly1] gi|257089304|ref|ZP_05583665.1| ABC amino acid transporter [Enterococcus faecalis CH188] gi|257415457|ref|ZP_05592451.1| arpJ [Enterococcus faecalis AR01/DG] gi|257421139|ref|ZP_05598129.1| ABC amino acid transporter [Enterococcus faecalis X98] gi|293383772|ref|ZP_06629679.1| amino acid ABC transporter, amino acid-binding/permease protein [Enterococcus faecalis R712] gi|293388752|ref|ZP_06633245.1| amino acid ABC transporter, amino acid-binding/permease protein [Enterococcus faecalis S613] gi|300860123|ref|ZP_07106211.1| ABC transporter, permease protein [Enterococcus faecalis TUSoD Ef11] gi|307271893|ref|ZP_07553161.1| ABC transporter, permease protein [Enterococcus faecalis TX0855] gi|307275311|ref|ZP_07556454.1| ABC transporter, permease protein [Enterococcus faecalis TX2134] gi|307290910|ref|ZP_07570800.1| ABC transporter, permease protein [Enterococcus faecalis TX0411] gi|312901565|ref|ZP_07760838.1| ABC transporter, permease protein [Enterococcus faecalis TX0470] gi|312904453|ref|ZP_07763612.1| ABC transporter, permease protein [Enterococcus faecalis TX0635] gi|312907012|ref|ZP_07766008.1| ABC transporter, permease protein [Enterococcus faecalis DAPTO 512] gi|312952839|ref|ZP_07771701.1| ABC transporter, permease protein [Enterococcus faecalis TX0102] gi|312978730|ref|ZP_07790457.1| ABC transporter, permease protein [Enterococcus faecalis DAPTO 516] gi|227074736|gb|EEI12699.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus faecalis TX0104] gi|229306059|gb|EEN72055.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus faecalis ATCC 29200] gi|229308088|gb|EEN74075.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus faecalis TX1322] gi|255962363|gb|EET94839.1| amino acid ABC transporter [Enterococcus faecalis T1] gi|256597290|gb|EEU16466.1| amino acid ABC transporter [Enterococcus faecalis ATCC 4200] gi|256682900|gb|EEU22595.1| amino acid ABC transporter [Enterococcus faecalis T3] gi|256709821|gb|EEU24865.1| amino acid ABC transporter [Enterococcus faecalis T8] gi|256950515|gb|EEU67147.1| arpJ [Enterococcus faecalis Merz96] gi|256954782|gb|EEU71414.1| arpJ [Enterococcus faecalis HIP11704] gi|256989168|gb|EEU76470.1| amino acid-binding/permease [Enterococcus faecalis E1Sol] gi|256991837|gb|EEU79139.1| amino acid ABC transporter [Enterococcus faecalis Fly1] gi|256998116|gb|EEU84636.1| ABC amino acid transporter [Enterococcus faecalis CH188] gi|257157285|gb|EEU87245.1| arpJ [Enterococcus faecalis ARO1/DG] gi|257162963|gb|EEU92923.1| ABC amino acid transporter [Enterococcus faecalis X98] gi|291078848|gb|EFE16212.1| amino acid ABC transporter, amino acid-binding/permease protein [Enterococcus faecalis R712] gi|291081909|gb|EFE18872.1| amino acid ABC transporter, amino acid-binding/permease protein [Enterococcus faecalis S613] gi|295113911|emb|CBL32548.1| amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-)/amino acid ABC transporter membrane protein, PAAT family (TC 3.A.1.3.-) [Enterococcus sp. 7L76] gi|300850941|gb|EFK78690.1| ABC transporter, permease protein [Enterococcus faecalis TUSoD Ef11] gi|306497980|gb|EFM67507.1| ABC transporter, permease protein [Enterococcus faecalis TX0411] gi|306507945|gb|EFM77072.1| ABC transporter, permease protein [Enterococcus faecalis TX2134] gi|306511399|gb|EFM80401.1| ABC transporter, permease protein [Enterococcus faecalis TX0855] gi|310626997|gb|EFQ10280.1| ABC transporter, permease protein [Enterococcus faecalis DAPTO 512] gi|310629355|gb|EFQ12638.1| ABC transporter, permease protein [Enterococcus faecalis TX0102] gi|310632151|gb|EFQ15434.1| ABC transporter, permease protein [Enterococcus faecalis TX0635] gi|311288437|gb|EFQ66993.1| ABC transporter, permease protein [Enterococcus faecalis DAPTO 516] gi|311291360|gb|EFQ69916.1| ABC transporter, permease protein [Enterococcus faecalis TX0470] gi|315029764|gb|EFT41696.1| ABC transporter, permease protein [Enterococcus faecalis TX4000] gi|315148051|gb|EFT92067.1| ABC transporter, permease protein [Enterococcus faecalis TX4244] gi|315149654|gb|EFT93670.1| ABC transporter, permease protein [Enterococcus faecalis TX0012] gi|315152966|gb|EFT96982.1| ABC transporter, permease protein [Enterococcus faecalis TX0031] gi|315155197|gb|EFT99213.1| ABC transporter, permease protein [Enterococcus faecalis TX0043] gi|315157525|gb|EFU01542.1| ABC transporter, permease protein [Enterococcus faecalis TX0312] gi|315163047|gb|EFU07064.1| ABC transporter, permease protein [Enterococcus faecalis TX0645] gi|315171996|gb|EFU16013.1| ABC transporter, permease protein [Enterococcus faecalis TX1342] gi|315174863|gb|EFU18880.1| ABC transporter, permease protein [Enterococcus faecalis TX1346] gi|315577324|gb|EFU89515.1| ABC transporter, permease protein [Enterococcus faecalis TX0630] gi|327534474|gb|AEA93308.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus faecalis OG1RF] Length = 487 Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 39/112 (34%), Positives = 72/112 (64%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IALS + A++AEI+R+G+ AV +GQ+EAA +LG+ +A R ++ PQA+++I+P L ++ Sbjct: 362 IALSLNSGAYVAEIIRAGIQAVNKGQLEAARSLGMNQNQAMRYIIFPQAIKNILPALGNE 421 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382 ++ ++K SS+ +G ++L+ G + + + LI IY L+ I+ Sbjct: 422 FVTVIKESSVVSVIGVSELIFQAGNVQGASFKPFLPYLIVSLIYFVLTFTIS 473 Score = 38.1 bits (87), Expect = 2.3, Method: Compositional matrix adjust. Identities = 26/80 (32%), Positives = 40/80 (50%), Gaps = 5/80 (6%) Query: 70 FEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWIC 129 F+ DQ + Y L G T +LAF G++ I+G L+ +L+ +K++ I Sbjct: 270 FQKDQSFL-----QKYGKFYLNGAGYTIFLAFIGVLFGAILGALLALMKLANSKILRGIA 324 Query: 130 RVYVEVFRNIPPLVVIFFLY 149 Y+E R P LV IF +Y Sbjct: 325 IAYIEYVRGTPLLVQIFIVY 344 >gi|218512654|ref|ZP_03509494.1| probable amino acid ABC transporter, permease protein [Rhizobium etli 8C-3] Length = 172 Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 43/113 (38%), Positives = 64/113 (56%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I L+ +++AF+ EI R G+ AVP GQ EAA ALGL +R V+LPQA + +P Sbjct: 57 IGLTAHSSAFLGEIWRGGIEAVPLGQTEAARALGLPYRHRMLDVVLPQAFKISLPATIGF 116 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 + L+K +SL +GF +L G I N T Q + + + IY +L ++L Sbjct: 117 LVGLVKGTSLVAIIGFTELTRAGQIISNNTFQPLIVFGMVGAIYFALCWPLSL 169 >gi|261819590|ref|YP_003257696.1| polar amino acid ABC transporter inner membrane protein [Pectobacterium wasabiae WPP163] gi|261603603|gb|ACX86089.1| polar amino acid ABC transporter, inner membrane subunit [Pectobacterium wasabiae WPP163] Length = 221 Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 53/200 (26%), Positives = 100/200 (50%), Gaps = 18/200 (9%) Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249 F+F LGI+++L R + K K L Y+ ++I G P LV + L + Sbjct: 31 FIFGLALGILIALV-----RLYGPKPLKWLGDFYV--WVIRGTPLLVQLFLIF------- 76 Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309 + F + I + A+ +EIVR +++VP+GQ AA +LG+ R+ Sbjct: 77 ----YGLPSAGITLDAFPAALIGFTVSVGAYSSEIVRGAILSVPKGQWSAAYSLGMNGRQ 132 Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369 A R V+ PQ++ +PPL++ +++L+K++SLA + ++ I++ T + + + + Sbjct: 133 AIRWVIFPQSVFVSLPPLSNTFISLIKDTSLAAVITVPEMFLSAQRIVSVTYEPLILYVE 192 Query: 370 WMFIYLSLSIMIALFMNRLN 389 IYL S +++ +L Sbjct: 193 AALIYLMFSTVLSQLQVKLE 212 >gi|148976101|ref|ZP_01812844.1| arginine transporter permease subunit ArtQ [Vibrionales bacterium SWAT-3] gi|145964496|gb|EDK29750.1| arginine transporter permease subunit ArtQ [Vibrionales bacterium SWAT-3] Length = 228 Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 45/134 (33%), Positives = 77/134 (57%), Gaps = 1/134 (0%) Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321 VSP F+S +ALS A++ ++ +R L AV +GQ EAA ALG+ +A ++LPQA+R Sbjct: 87 VSP-FLSGVVALSLIFASYASQTIRGALKAVSKGQREAASALGIPQSRAFFRIVLPQAVR 145 Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 +P LT+Q+L LLK+++L +G DL+ T +A IYL ++++ Sbjct: 146 HALPGLTNQWLVLLKDTALVSLIGATDLLKQAQLTSAATHEAFTWYATAAAIYLIITLIT 205 Query: 382 ALFMNRLNAKIALK 395 + ++ K +++ Sbjct: 206 QRAVKVIDGKFSIQ 219 >gi|145641226|ref|ZP_01796806.1| arginine transporter permease subunit ArtQ [Haemophilus influenzae R3021] gi|145274063|gb|EDK13929.1| arginine transporter permease subunit ArtQ [Haemophilus influenzae 22.4-21] Length = 221 Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 59/210 (28%), Positives = 106/210 (50%), Gaps = 15/210 (7%) Query: 191 VFSFVLGIVLSL-FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY--QLHFD 247 V S +LG+ LSL FA + F GK + + + L+ GLP ++++ L Y Sbjct: 21 VCSLILGLFLSLIFAALEANRF---VGKPMTVFVV---LLRGLPEIIVVLLVYFGSTELV 74 Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307 + + G++ G F +ALS AA+ ++ +R + A+P+GQ E+ ALGL+ Sbjct: 75 EMLTGEYIEFGA------FGCGVLALSLIFAAYASQTLRGAIQAIPKGQWESGAALGLSK 128 Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367 +++PQ R +P L++Q+L LLK+++L +G DL+ I T Q Sbjct: 129 SYTFIHIVMPQVWRHALPGLSTQWLVLLKDTALVSLIGVDDLMHQADLINTNTHQPFTWY 188 Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 I IYL+++++ + + +L + E+ Sbjct: 189 GIAALIYLAVTLISQVGIRKLELRFTRFER 218 >gi|254780172|ref|YP_003064585.1| general L-amino acid transport system permease protein [Candidatus Liberibacter asiaticus str. psy62] gi|254039849|gb|ACT56645.1| general L-amino acid transport system permease protein [Candidatus Liberibacter asiaticus str. psy62] Length = 386 Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 29/82 (35%), Positives = 57/82 (69%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + +S + +A+IAE++R GL ++ +GQ EAA +LGL++ + RL+++PQ ++ +IP + + Sbjct: 254 LGVSAFASAYIAEVLRGGLQSISKGQFEAANSLGLSYLQKMRLIIMPQVIKRVIPGIVNT 313 Query: 331 YLNLLKNSSLAVAVGFADLVSV 352 ++ L K+SSL + DL+ + Sbjct: 314 FIGLFKDSSLISIINMFDLLGI 335 >gi|28900493|ref|NP_800148.1| arginine transporter permease subunit ArtQ [Vibrio parahaemolyticus RIMD 2210633] gi|260365646|ref|ZP_05778167.1| arginine ABC transporter, permease protein ArtQ [Vibrio parahaemolyticus K5030] gi|260877446|ref|ZP_05889801.1| arginine ABC transporter, permease protein ArtQ [Vibrio parahaemolyticus AN-5034] gi|260898927|ref|ZP_05907368.1| arginine ABC transporter, permease protein ArtQ [Vibrio parahaemolyticus Peru-466] gi|260901239|ref|ZP_05909634.1| arginine ABC transporter, permease protein ArtQ [Vibrio parahaemolyticus AQ4037] gi|28808873|dbj|BAC61981.1| arginine ABC transporter, permease protein [Vibrio parahaemolyticus RIMD 2210633] gi|308089212|gb|EFO38907.1| arginine ABC transporter, permease protein ArtQ [Vibrio parahaemolyticus Peru-466] gi|308090630|gb|EFO40325.1| arginine ABC transporter, permease protein ArtQ [Vibrio parahaemolyticus AN-5034] gi|308106792|gb|EFO44332.1| arginine ABC transporter, permease protein ArtQ [Vibrio parahaemolyticus AQ4037] gi|308111440|gb|EFO48980.1| arginine ABC transporter, permease protein ArtQ [Vibrio parahaemolyticus K5030] Length = 229 Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 46/134 (34%), Positives = 77/134 (57%), Gaps = 1/134 (0%) Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321 VSP F+S +ALS A++ ++ +R L AV RGQ EAA ALG++ A ++LPQA+R Sbjct: 87 VSP-FLSGVVALSLIFASYASQTLRGALKAVGRGQREAASALGISQFHAFVRIVLPQAVR 145 Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 +P LT+Q+L LLK+++L +G DL+ T +A IYL ++++ Sbjct: 146 HALPGLTNQWLVLLKDTALVSLIGVTDLLKQAQLTSAATHEAFTWYATAAAIYLVITLIT 205 Query: 382 ALFMNRLNAKIALK 395 + ++ K +++ Sbjct: 206 QRAVKVIDKKFSIQ 219 >gi|157828045|ref|YP_001494287.1| amino acid ABC transporter permease protein [Rickettsia rickettsii str. 'Sheila Smith'] gi|165932742|ref|YP_001649531.1| hypothetical protein RrIowa_0212 [Rickettsia rickettsii str. Iowa] gi|157800526|gb|ABV75779.1| amino acid ABC transporter permease protein [Rickettsia rickettsii str. 'Sheila Smith'] gi|165907829|gb|ABY72125.1| hypothetical protein RrIowa_0212 [Rickettsia rickettsii str. Iowa] Length = 218 Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 48/166 (28%), Positives = 88/166 (53%), Gaps = 29/166 (17%) Query: 191 VFSFVLGIVLSL------FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244 +F V+G++L++ A RL +F+ + PLL + + F P + I +K+ + Sbjct: 31 IFGLVIGMLLAICKVNKNHALRLFANFYTSIFRGTPLLIQLSIIYFASPYI--IGIKFSV 88 Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304 FM+ IA S + A+++E++R+G+ AV +GQ EAA AL Sbjct: 89 ---------------------FMAGAIAFSLNSGAYVSEVIRAGINAVDKGQFEAAEALA 127 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 + T+ ++LPQA+++I P L ++ +NL+K S++ +G DL+ Sbjct: 128 IPKFLITKDIILPQAVKNIFPSLVNELVNLIKESAIISMLGEMDLM 173 >gi|254422244|ref|ZP_05035962.1| ABC transporter, permease protein [Synechococcus sp. PCC 7335] gi|196189733|gb|EDX84697.1| ABC transporter, permease protein [Synechococcus sp. PCC 7335] Length = 531 Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 33/82 (40%), Positives = 58/82 (70%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I L+ ++AA++AE VR+GL +VP+GQ EAA +LGL L++LPQA+++ IP + Q Sbjct: 402 IGLTIFSAAYLAENVRAGLQSVPQGQGEAAQSLGLNKPLTMALIVLPQALKTAIPAIVGQ 461 Query: 331 YLNLLKNSSLAVAVGFADLVSV 352 +++L ++++L VG +L+ + Sbjct: 462 FISLFQDTTLLGIVGLLELLGI 483 >gi|70728646|ref|YP_258395.1| amino acid ABC transporter permease [Pseudomonas fluorescens Pf-5] gi|68342945|gb|AAY90551.1| amino acid ABC transporter, permease protein [Pseudomonas fluorescens Pf-5] Length = 242 Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 54/174 (31%), Positives = 83/174 (47%), Gaps = 2/174 (1%) Query: 226 TFLIFGLPTLVLIALK-YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284 T LI G+P LVL+ L Y L F ++P F + I L A+ E Sbjct: 67 TTLIRGVPDLVLMLLIFYSLQTWLTSFTDFMEWDYIEINP-FSAGVITLGFIYGAYFTET 125 Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344 R ++AVPRGQ+EAA A GL + R V+ PQ MR +P + + ++ +LK ++L + Sbjct: 126 FRGAILAVPRGQVEAATAYGLKRGQRFRFVVFPQMMRFALPGIGNNWMVMLKATALVSII 185 Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 G ADLV T Q +++ IYL ++ + RL + A ++ Sbjct: 186 GLADLVKAAQDAGKSTYQLFYFLVLAALIYLLITSASNFVLRRLERRYAAGARE 239 >gi|331003782|ref|ZP_08327276.1| hypothetical protein HMPREF0491_02138 [Lachnospiraceae oral taxon 107 str. F0167] gi|330412165|gb|EGG91560.1| hypothetical protein HMPREF0491_02138 [Lachnospiraceae oral taxon 107 str. F0167] Length = 216 Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 34/115 (29%), Positives = 69/115 (60%), Gaps = 1/115 (0%) Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 AA+ AEI RSG+ ++P GQ EAA LG + + +++LPQ ++ I+P +T++ + L+K+ Sbjct: 99 AAYFAEIYRSGIQSMPSGQYEAAKILGYSKSQTFFIIILPQVIKRILPSITNEVITLVKD 158 Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 +SLA + A++ ++ + + T + +F Y+ + ++A M+ + K+ Sbjct: 159 TSLAFTISVAEMFTMAKALASSTTSMYPFVCAALFYYM-FNAIVAFVMDMIEKKL 212 >gi|166030980|ref|ZP_02233809.1| hypothetical protein DORFOR_00661 [Dorea formicigenerans ATCC 27755] gi|166029247|gb|EDR48004.1| hypothetical protein DORFOR_00661 [Dorea formicigenerans ATCC 27755] Length = 216 Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 58/208 (27%), Positives = 111/208 (53%), Gaps = 19/208 (9%) Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246 A +FS LG+++S R+S++ K + LYIS ++ G P ++ + + Y Sbjct: 22 AATLIFSLPLGLLISF--GRMSKN---KIISTIFKLYIS--VMRGTPLMLQLMVIY---- 70 Query: 247 DKPVLGQFNFIGGSTVSPEF--MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304 G F +I G +S + M++ I AA+ AEI R G+ ++P+GQ EAA LG Sbjct: 71 ----FGPF-YILGVQISQSWKNMAVAIGFVLNYAAYFAEIYRGGIESMPQGQYEAAKILG 125 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364 T + ++LPQ ++ I+P +T++ + L+K++SLA +G ++ ++ + + + Sbjct: 126 YTKAQTFIRIILPQVIKRILPAITNETITLVKDTSLAFTIGVTEMFTMAKALASGQVSML 185 Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKI 392 +F Y+ L++++A M R+ K+ Sbjct: 186 PYAFAALFYYI-LNLVVAFIMERIEKKM 212 Score = 39.7 bits (91), Expect = 0.91, Method: Compositional matrix adjust. Identities = 20/59 (33%), Positives = 36/59 (61%), Gaps = 3/59 (5%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP---PLVVIFF 147 G V + W+ + +I + +G L+ GR+S NK+++ I ++Y+ V R P L+VI+F Sbjct: 13 GMVTSLWIFAATLIFSLPLGLLISFGRMSKNKIISTIFKLYISVMRGTPLMLQLMVIYF 71 >gi|29375478|ref|NP_814632.1| amino acid ABC transporter, amino acid-binding/permease protein [Enterococcus faecalis V583] gi|227555005|ref|ZP_03985052.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus faecalis HH22] gi|255973964|ref|ZP_05424550.1| amino acid ABC transporter [Enterococcus faecalis T2] gi|257086232|ref|ZP_05580593.1| amino acid ABC transporter [Enterococcus faecalis D6] gi|257418488|ref|ZP_05595482.1| ABC amino acid transporter [Enterococcus faecalis T11] gi|307278411|ref|ZP_07559486.1| ABC transporter, permease protein [Enterococcus faecalis TX0860] gi|307286701|ref|ZP_07566787.1| ABC transporter, permease protein [Enterococcus faecalis TX0109] gi|29342938|gb|AAO80702.1| amino acid ABC transporter, amino acid-binding/permease protein [Enterococcus faecalis V583] gi|227175864|gb|EEI56836.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus faecalis HH22] gi|255966836|gb|EET97458.1| amino acid ABC transporter [Enterococcus faecalis T2] gi|256994262|gb|EEU81564.1| amino acid ABC transporter [Enterococcus faecalis D6] gi|257160316|gb|EEU90276.1| ABC amino acid transporter [Enterococcus faecalis T11] gi|306502179|gb|EFM71463.1| ABC transporter, permease protein [Enterococcus faecalis TX0109] gi|306504917|gb|EFM74112.1| ABC transporter, permease protein [Enterococcus faecalis TX0860] gi|315027079|gb|EFT39011.1| ABC transporter, permease protein [Enterococcus faecalis TX2137] gi|315165246|gb|EFU09263.1| ABC transporter, permease protein [Enterococcus faecalis TX1302] gi|315167972|gb|EFU11989.1| ABC transporter, permease protein [Enterococcus faecalis TX1341] gi|315574194|gb|EFU86385.1| ABC transporter, permease protein [Enterococcus faecalis TX0309B] gi|315581663|gb|EFU93854.1| ABC transporter, permease protein [Enterococcus faecalis TX0309A] Length = 487 Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 39/112 (34%), Positives = 72/112 (64%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IALS + A++AEI+R+G+ AV +GQ+EAA +LG+ +A R ++ PQA+++I+P L ++ Sbjct: 362 IALSLNSGAYVAEIIRAGIQAVNKGQLEAARSLGMNQNQAMRYIIFPQAIKNILPALGNE 421 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382 ++ ++K SS+ +G ++L+ G + + + LI IY L+ I+ Sbjct: 422 FVTVIKESSVVSVIGVSELIFQAGNVQGASFKPFLPYLIVSLIYFVLTFTIS 473 Score = 38.1 bits (87), Expect = 2.3, Method: Compositional matrix adjust. Identities = 26/80 (32%), Positives = 40/80 (50%), Gaps = 5/80 (6%) Query: 70 FEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWIC 129 F+ DQ + Y L G T +LAF G++ I+G L+ +L+ +K++ I Sbjct: 270 FQKDQSFL-----QKYGKFYLNGAGYTIFLAFIGVLFGAILGALLALMKLANSKILRGIA 324 Query: 130 RVYVEVFRNIPPLVVIFFLY 149 Y+E R P LV IF +Y Sbjct: 325 IAYIEYVRGTPLLVQIFIVY 344 >gi|283457666|ref|YP_003362251.1| amino acid ABC transporter permease [Rothia mucilaginosa DY-18] gi|283133666|dbj|BAI64431.1| ABC-type amino acid transport system, permease component [Rothia mucilaginosa DY-18] Length = 312 Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 33/100 (33%), Positives = 65/100 (65%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+++ I L+ Y + IAE++RSG+ +PRGQ EA +A+GLT + +L+PQA +++P Sbjct: 151 FIAVVIGLTLYNGSVIAELLRSGVKQLPRGQGEAGLAIGLTPSQTLIQILIPQAFTAMMP 210 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365 + SQ++ +LK+++L + + +L++ I + G ++ Sbjct: 211 SMLSQFVVILKDTALGYIISYPELLASARRIGSGDGNVLQ 250 Score = 36.6 bits (83), Expect = 7.9, Method: Compositional matrix adjust. Identities = 23/86 (26%), Positives = 43/86 (50%), Gaps = 1/86 (1%) Query: 64 LSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK 123 + E+ E ++ +T+ ++ + L G +T A ++ + G L G RLS + Sbjct: 51 MGEKGQLEPEKWTDLFTA-RAWTSYYLPGLASTLSAAAISVVTSIAFGLLFGIARLSQYR 109 Query: 124 LVAWICRVYVEVFRNIPPLVVIFFLY 149 + WI V VE FR +P L+++ F + Sbjct: 110 VFRWIGTVVVEFFRAVPVLIMMIFFW 135 >gi|320008165|gb|ADW03015.1| polar amino acid ABC transporter, inner membrane subunit [Streptomyces flavogriseus ATCC 33331] Length = 304 Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 47/143 (32%), Positives = 83/143 (58%), Gaps = 5/143 (3%) Query: 260 STVSPEFMSLY---IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316 +T++ E LY L Y A+ +AEIVR+G++++PRGQ +AA A+G+ + R VLL Sbjct: 132 TTLATEDRLLYAVVTGLVLYNASVLAEIVRAGILSLPRGQTDAAKAIGMRKGQTMRYVLL 191 Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAV-GFADLV-SVGGTIINQTGQAIEIILIWMFIY 374 PQ++ +++P + SQ + ++K+++L AV F +L+ SV N I I IY Sbjct: 192 PQSVTAMLPAIVSQIVVIVKDTALGGAVLTFPELLASVRPMSANYGANTIACFTIIALIY 251 Query: 375 LSLSIMIALFMNRLNAKIALKEK 397 ++L+ + F + L ++ +K Sbjct: 252 MALNFALTSFASWLEGRLRRGKK 274 Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust. Identities = 25/67 (37%), Positives = 36/67 (53%) Query: 79 YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138 +TS + T I G NT AF ++ A +G L G GRLS ++ + V VE FR Sbjct: 55 FTSPQPWETYIWPGLQNTLKAAFFALLIALPLGALFGIGRLSDHRWMRMPSGVVVEFFRA 114 Query: 139 IPPLVVI 145 IP L+++ Sbjct: 115 IPVLILM 121 >gi|167581947|ref|ZP_02374821.1| amino acid ABC transporter, permease protein [Burkholderia thailandensis TXDOH] Length = 246 Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 55/171 (32%), Positives = 84/171 (49%), Gaps = 25/171 (14%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTG--KALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248 V LG+ L+L L G +A+P+L + + F LP L LH D Sbjct: 57 VLGVALGVALALATGALRGALIVVIGFFRAIPVLMLIFWTYFLLPVL--------LHADV 108 Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308 P L ++ ALS A++A V +G+ A GQ +A ++LGLT R Sbjct: 109 PGLA---------------AVVCALSLVGGAYLAHSVHAGIRAAGDGQRQAGLSLGLTRR 153 Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359 + R VLLPQA+R + P +Q+++L+K++SLA VG +L V + N+ Sbjct: 154 QTVRYVLLPQAVRIMTPSFVNQWVSLVKDTSLAYIVGVPELSFVATQVNNR 204 >gi|163857806|ref|YP_001632104.1| amino acid ABC transporter, permease protein [Bordetella petrii DSM 12804] gi|163261534|emb|CAP43836.1| amino acid ABC transporter, permease protein [Bordetella petrii] Length = 230 Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 35/83 (42%), Positives = 56/83 (67%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +AL+ + A+++EIVR G+ +VPRGQ+E A A+G+ R+ R V+LPQA + +PPL Q Sbjct: 101 VALTLHHTAYMSEIVRVGIQSVPRGQIEGAKAVGMDFRQRLRYVVLPQAFANTLPPLLGQ 160 Query: 331 YLNLLKNSSLAVAVGFADLVSVG 353 L+K++SL + +LV+ G Sbjct: 161 TAVLIKDTSLLSLIAVFELVAAG 183 >gi|330873993|gb|EGH08142.1| amino acid ABC transporter permease [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 222 Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 38/122 (31%), Positives = 69/122 (56%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I S AA+ EI+R+ + +V RGQ EAA ++G+T + R +LPQA R+ +P L + Sbjct: 94 IGFSLNMAAYACEILRAAIGSVERGQWEAAASIGMTRWQTMRRAILPQAARTALPSLGNS 153 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 +++L+K+++LA + +L I +T + + L IY L+ ++ N+L A Sbjct: 154 FISLVKDTALAATIQVPELFRQAQLITARTFEIFTMYLAAALIYWILATALSHLQNKLEA 213 Query: 391 KI 392 ++ Sbjct: 214 RV 215 Score = 38.5 bits (88), Expect = 1.8, Method: Compositional matrix adjust. Identities = 18/32 (56%), Positives = 21/32 (65%) Query: 118 RLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 RLS KLV WI R+YV FR P LV +F +Y Sbjct: 45 RLSRFKLVNWIARIYVSFFRGTPLLVQLFVIY 76 >gi|329577884|gb|EGG59305.1| ABC transporter, permease protein [Enterococcus faecalis TX1467] Length = 487 Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 39/112 (34%), Positives = 72/112 (64%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IALS + A++AEI+R+G+ AV +GQ+EAA +LG+ +A R ++ PQA+++I+P L ++ Sbjct: 362 IALSLNSGAYVAEIIRAGIQAVNKGQLEAARSLGMNQNQAMRYIIFPQAIKNILPALGNE 421 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382 ++ ++K SS+ +G ++L+ G + + + LI IY L+ I+ Sbjct: 422 FVTVIKESSVVSVIGVSELIFQAGNVQGASFKPFLPYLIVSLIYFVLTFTIS 473 Score = 38.1 bits (87), Expect = 2.3, Method: Compositional matrix adjust. Identities = 26/80 (32%), Positives = 40/80 (50%), Gaps = 5/80 (6%) Query: 70 FEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWIC 129 F+ DQ + Y L G T +LAF G++ I+G L+ +L+ +K++ I Sbjct: 270 FQKDQSFL-----QKYGKFYLNGAGYTIFLAFIGVLFGAILGALLALMKLANSKILRGIA 324 Query: 130 RVYVEVFRNIPPLVVIFFLY 149 Y+E R P LV IF +Y Sbjct: 325 IAYIEYVRGTPLLVQIFIVY 344 >gi|227823072|ref|YP_002827044.1| putative transmembrane component of ABC transporter [Sinorhizobium fredii NGR234] gi|227342073|gb|ACP26291.1| putative transmembrane component of ABC transporter [Sinorhizobium fredii NGR234] Length = 215 Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 53/162 (32%), Positives = 84/162 (51%), Gaps = 17/162 (10%) Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258 +L LFA R + + G YI+ F G P L+ + L + F P+LG Sbjct: 36 LLILFARIAKRPWLRRFGAG----YIALFQ--GTPLLMQLFLMF---FGLPMLG------ 80 Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 + P + + + L+ Y +A++AEI R G+ A+PRGQ +A +LGL + + RLV+LPQ Sbjct: 81 -FRIEP-WTAAALGLTFYASAYLAEIWRGGVEALPRGQWDAGASLGLHYLQELRLVILPQ 138 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 A PP + L+K+++L +GF +L+ I N T Sbjct: 139 AFAITRPPAVGFLVQLIKSTALTSIIGFEELLRTANAINNAT 180 >gi|50121082|ref|YP_050249.1| putative ABC transporter permease [Pectobacterium atrosepticum SCRI1043] gi|49611608|emb|CAG75056.1| putative ABC transporter, permease [Pectobacterium atrosepticum SCRI1043] Length = 314 Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 40/135 (29%), Positives = 77/135 (57%), Gaps = 3/135 (2%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 +F + L+ +A+ AEI+R G++ V GQ EA+ ALGL + T ++LPQA+RSI+ Sbjct: 161 QFSVAVLGLTLVQSAYTAEIIRGGILGVDAGQFEASAALGLPGGRRTVRIILPQALRSIL 220 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL---IWMFIYLSLSIMI 381 P ++ ++L K +S+ + +L I N+T Q I +++ IW + ++ ++ Sbjct: 221 PTGFNEIISLAKGTSIVYVLALPELFYTVQVIYNRTQQVIPLLMVATIWYLLITTVLSIV 280 Query: 382 ALFMNRLNAKIALKE 396 ++ R ++ A++E Sbjct: 281 QYYVERYVSRGAVRE 295 >gi|330980427|gb|EGH78530.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 329 Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 65/192 (33%), Positives = 96/192 (50%), Gaps = 15/192 (7%) Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF--DKP 249 FS +LG L+L RLS AL YI F +P L+++ + Y + D Sbjct: 97 FSIILGTALAL--ARLS---GSPLLAALAWGYIWFFR--SMPALLVLIILYNFAYLYDHI 149 Query: 250 VLG----QFNFIGGSTVS--PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 VLG Q F STV +F + LS +A+ AEI+R GLI V GQ EAA AL Sbjct: 150 VLGVPFTQLVFAEWSTVDVLSQFTVAVLGLSLMQSAYTAEIIRGGLIGVDAGQHEAAAAL 209 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363 GL + ++LPQA+RSI+P ++ + L+K +S+ + +L I N+T Sbjct: 210 GLPVSRRIFRIILPQALRSILPSGFNEIIGLVKGTSIVYVLALPELFYTVQVIYNRTQAV 269 Query: 364 IEIILIWMFIYL 375 I ++++ YL Sbjct: 270 IPLLIVATVWYL 281 >gi|325841308|ref|ZP_08167409.1| putative arginine ABC transporter, permease protein ArtQ [Turicibacter sp. HGF1] gi|325489989|gb|EGC92336.1| putative arginine ABC transporter, permease protein ArtQ [Turicibacter sp. HGF1] Length = 220 Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 37/132 (28%), Positives = 81/132 (61%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 ++ + IAL ++A++AEI+R+G+ AV +GQMEAA +LG++ ++ PQA+++I+ Sbjct: 89 DWTCIVIALVINSSAYVAEIIRAGIQAVDKGQMEAAKSLGMSDVHMMTRIIFPQAVKNIL 148 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 P L ++++ ++K +SLA DL++ I + T + I ++I IY ++ ++ Sbjct: 149 PALGNEFIMMVKETSLASVFFINDLMTSYQMIKSATFKPIAPLMITAVIYFIVTFSLSKV 208 Query: 385 MNRLNAKIALKE 396 + + ++++ + Sbjct: 209 VKAMEGRLSVSD 220 >gi|293604534|ref|ZP_06686939.1| ABC superfamily ATP binding cassette transporter, membrane protein [Achromobacter piechaudii ATCC 43553] gi|292817115|gb|EFF76191.1| ABC superfamily ATP binding cassette transporter, membrane protein [Achromobacter piechaudii ATCC 43553] Length = 217 Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 58/204 (28%), Positives = 103/204 (50%), Gaps = 18/204 (8%) Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251 S VLG+V +L + + +G + LL G+P +VL+ + ++F P + Sbjct: 32 LSTVLGLVWALMRVSGNTFLSKFSGGVINLLR-------GIPIIVLL---FYIYFVMPDM 81 Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311 G + + V + L +A S Y A E R+G+ A+ RGQ+EAA+A+G++ Sbjct: 82 G----VSFTAVQAAIIGLGVAYSAYQA----ENFRAGIQAIDRGQIEAAMAMGMSWSMTM 133 Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371 R V+LPQA++ ++PP + + +LK+SS A + A+L G I T + + + Sbjct: 134 RRVVLPQAVKIVLPPYGNIMIMMLKDSSQASTITVAELALQGKLIAVSTFKNATVFSLVA 193 Query: 372 FIYLSLSIMIALFMNRLNAKIALK 395 +YL + + + L + L + A K Sbjct: 194 LMYLVMCVPLILLVRHLEKRSAAK 217 >gi|261884771|ref|ZP_06008810.1| amino acid ABC transporter, permease protein PEB1 [Campylobacter fetus subsp. venerealis str. Azul-94] Length = 186 Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 31/79 (39%), Positives = 57/79 (72%), Gaps = 2/79 (2%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + + Y A+++E+VRSG+ ++P+GQ EAA + G ++ + ++LPQ+++ I+PP T+Q Sbjct: 100 LGIGAYHGAYMSEVVRSGINSIPKGQFEAATSQGFSYIEQMMYIILPQSIKIILPPATNQ 159 Query: 331 YLNLLKNSSLAVAVGFADL 349 +NL+KNSS+ + + ADL Sbjct: 160 TVNLIKNSSVLLII--ADL 176 >gi|126731933|ref|ZP_01747736.1| ABC transporter, membrane spanning protein (amino acid) [Sagittula stellata E-37] gi|126707465|gb|EBA06528.1| ABC transporter, membrane spanning protein (amino acid) [Sagittula stellata E-37] Length = 461 Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 27/82 (32%), Positives = 57/82 (69%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I + + +A++AE++R GL A+P+GQ E ++LGL+ + RL+++PQA+ ++IP + + Sbjct: 330 IGVVLFASAYMAEVIRGGLQAIPKGQYEGGMSLGLSFWQQMRLIIMPQALTTVIPGIVNT 389 Query: 331 YLNLLKNSSLAVAVGFADLVSV 352 ++ L K+++L + + DL+ + Sbjct: 390 FIGLFKDTTLVLIISIFDLLGI 411 >gi|53728921|ref|ZP_00348273.1| COG0765: ABC-type amino acid transport system, permease component [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|126209155|ref|YP_001054380.1| putative ABC transporter, permease protein, amino acid [Actinobacillus pleuropneumoniae L20] gi|126097947|gb|ABN74775.1| putative ABC transporter, permease protein, amino acid [Actinobacillus pleuropneumoniae serovar 5b str. L20] Length = 219 Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 59/187 (31%), Positives = 89/187 (47%), Gaps = 25/187 (13%) Query: 205 TRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP 264 RL+R + E + + PLL FL +GLP I +K+ Sbjct: 50 NRLARGYIELS-RNTPLLIQLFFLYYGLPK---IGIKWD--------------------- 84 Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 F IAL A+++AE +R+GL+AVP+GQ EAA A+GL + R V+ PQA I Sbjct: 85 GFTCGIIALVFLGASYMAEALRAGLLAVPKGQTEAAKAIGLNRFQVFRYVIFPQAWAVSI 144 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 P + + L L+K +S+ AV A+L+ V II + E + + YL + + I+L Sbjct: 145 PAIGANVLFLIKETSVISAVAVAELMFVTKDIIGMDYKTNEALFLLFASYLVILLPISLL 204 Query: 385 MNRLNAK 391 K Sbjct: 205 ARHFENK 211 >gi|315446439|ref|YP_004079318.1| amino acid ABC transporter membrane protein, PAAT family ;amino acid ABC transporter substrate-binding protein, PAAT family [Mycobacterium sp. Spyr1] gi|315264742|gb|ADU01484.1| amino acid ABC transporter membrane protein, PAAT family ;amino acid ABC transporter substrate-binding protein, PAAT family [Mycobacterium sp. Spyr1] Length = 487 Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 65/208 (31%), Positives = 103/208 (49%), Gaps = 20/208 (9%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 + SFV+G+V++L L+R L YIS +I G P LV + + + F P Sbjct: 294 IISFVIGLVIAL-GVALARLSSNVVLSNLARFYIS--VIRGTPLLVQL---FIVFFALPE 347 Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 G + P F + IA S + AEI+RS + ++P+GQ EAA +GL + Sbjct: 348 FG-------VKIDP-FPAAVIAFSLNVGGYAAEIIRSAIQSIPKGQWEAAETIGLNYVGT 399 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ-----AIE 365 R ++LPQA R +PPL++ ++L+K++SLA + +L+ I T + Sbjct: 400 LRRIILPQATRVAVPPLSNTLISLVKDTSLASTILVTELLRQAQIIAAPTFEFFALYGTA 459 Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIA 393 + W+ I L LS A F +RL +A Sbjct: 460 AVYYWV-ICLVLSFGQARFEHRLERYVA 486 >gi|328470443|gb|EGF41354.1| arginine transporter permease subunit ArtQ [Vibrio parahaemolyticus 10329] Length = 229 Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 46/134 (34%), Positives = 77/134 (57%), Gaps = 1/134 (0%) Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321 VSP F+S +ALS A++ ++ +R L AV RGQ EAA ALG++ A ++LPQA+R Sbjct: 87 VSP-FLSGVVALSLIFASYASQTLRGALKAVGRGQREAASALGISQFHAFVRIVLPQAVR 145 Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 +P LT+Q+L LLK+++L +G DL+ T +A IYL ++++ Sbjct: 146 HALPGLTNQWLVLLKDTALVSLIGVTDLLKQAQLTSAATHEAFTWYATAAAIYLVITLIT 205 Query: 382 ALFMNRLNAKIALK 395 + ++ K +++ Sbjct: 206 QRAVKVIDKKFSIQ 219 >gi|170741316|ref|YP_001769971.1| polar amino acid ABC transporter inner membrane subunit [Methylobacterium sp. 4-46] gi|168195590|gb|ACA17537.1| polar amino acid ABC transporter, inner membrane subunit [Methylobacterium sp. 4-46] Length = 222 Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 55/166 (33%), Positives = 81/166 (48%), Gaps = 11/166 (6%) Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287 LI G P LV++ L + F P LG VSP + +L+ Y A++ EI R Sbjct: 59 LIQGTPLLVIMFLTF---FGLPPLGL-------RVSP-LTAAGASLTIYVGAYLGEIWRG 107 Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347 + +VPR Q EAA L L+ + V+LPQA+R PP + ++KN+SLA VGF Sbjct: 108 AIQSVPRPQWEAAEGLALSRAQRMTKVILPQAVRIATPPTVGFMVQIVKNTSLASVVGFV 167 Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393 +L G I N + I I +Y ++ ++ RL + A Sbjct: 168 ELARAGQIINNSLFEPFLIYAIIAAVYFAMCFPLSRLSQRLERRGA 213 >gi|91780446|ref|YP_555653.1| polar amino acid ABC transporter inner membrane protein [Burkholderia xenovorans LB400] gi|91693106|gb|ABE36303.1| amino acid ABC transporter membrane protein, PAAT family / amino acid ABC transporter ATP-binding protein, PAAT family [Burkholderia xenovorans LB400] Length = 602 Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 44/138 (31%), Positives = 76/138 (55%), Gaps = 4/138 (2%) Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321 +SP F + + L+ AAF AE +R G+++V +GQ EAA ALGL + R ++LPQAMR Sbjct: 166 ISP-FFAAVLGLTLNAAAFSAEAIRGGILSVDQGQREAAAALGLPGGRQVRRIVLPQAMR 224 Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL---IWMFIYLSLS 378 +I+P + + L K +S+ + DL I ++ + I +++ +W + L+ Sbjct: 225 AILPTAFNDVIGLAKGTSVVYILAMPDLFYTVQIIYHRNLEVIPLLMVATVWYLVILTAL 284 Query: 379 IMIALFMNRLNAKIALKE 396 I + + R A+ A +E Sbjct: 285 SAIQVHIERYYARGATRE 302 >gi|298290886|ref|YP_003692825.1| polar amino acid ABC transporter inner membrane subunit [Starkeya novella DSM 506] gi|296927397|gb|ADH88206.1| polar amino acid ABC transporter, inner membrane subunit [Starkeya novella DSM 506] Length = 240 Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 43/134 (32%), Positives = 72/134 (53%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 +F++ +AL AF +E++ + + AVP+GQ EAA ALGL+ + RLV PQ R + Sbjct: 103 QFVAGVVALGLVLGAFSSEVLLAAIRAVPKGQKEAAAALGLSGWRTFRLVTFPQLWRVAL 162 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 P L++ ++ LLK++SL + +DL+ + T Q L+ IYL S ++ Sbjct: 163 PGLSNNWMVLLKDTSLVSVIAISDLMRQTAIAVGVTKQPFFFYLVACLIYLVFSGASSVV 222 Query: 385 MNRLNAKIALKEKK 398 +L + A K+ Sbjct: 223 FGKLEDRAARGFKR 236 >gi|312194702|ref|YP_004014763.1| polar amino acid ABC transporter inner membrane protein [Frankia sp. EuI1c] gi|311226038|gb|ADP78893.1| polar amino acid ABC transporter, inner membrane subunit [Frankia sp. EuI1c] Length = 329 Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 51/175 (29%), Positives = 92/175 (52%), Gaps = 10/175 (5%) Query: 223 YISTFLIFGLPTLVLI-------ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSC 275 ++ T+ G P L+ + AL ++ P +F + + P ++ + L Sbjct: 128 WVYTWFFRGTPVLLQLIFWGTIGALYPRIAVGIPFGPEFASADSNKLIPLIVAGILGLGL 187 Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335 AA++AE+VR+G+ AV GQ+EAA ALG+ R ++LPQAM+ IIPP ++ +++L Sbjct: 188 NEAAYMAEVVRAGISAVDEGQIEAAQALGMGRGLTMRRIVLPQAMKVIIPPTGNETISML 247 Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL---FMNR 387 K SSL + +L I + Q I ++++ YL L+ ++++ F+ R Sbjct: 248 KTSSLVSIIAVIELTYSVQLIYARNYQTIPLLIVAAIWYLVLTSVLSVGQYFLER 302 >gi|27367225|ref|NP_762752.1| arginine transporter permease subunit ArtQ [Vibrio vulnificus CMCP6] gi|27358793|gb|AAO07742.1| Arginine ABC transporter, permease protein ArtQ [Vibrio vulnificus CMCP6] Length = 229 Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 46/130 (35%), Positives = 75/130 (57%), Gaps = 1/130 (0%) Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321 VSP F+S IALS A++ ++ +R L AV +GQ EAA ALG++ + ++LPQA+R Sbjct: 87 VSP-FLSGVIALSLIFASYASQTIRGALKAVNKGQREAASALGMSKSRTFFRIVLPQAVR 145 Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 +P LT+Q+L LLK+++L +G DL+ T +A IYL ++++ Sbjct: 146 HALPGLTNQWLVLLKDTALVSLIGVTDLLKQAQLTSAATHEAFTWYATAAAIYLVITLVT 205 Query: 382 ALFMNRLNAK 391 + ++AK Sbjct: 206 QRAVKIIDAK 215 >gi|115359034|ref|YP_776172.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria AMMD] gi|115284322|gb|ABI89838.1| amino acid ABC transporter membrane protein 1, PAAT family [Burkholderia ambifaria AMMD] Length = 225 Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 47/128 (36%), Positives = 69/128 (53%), Gaps = 4/128 (3%) Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282 Y T + G+P +++ + Y F L F G +SP F + IAL+ A+ + Sbjct: 52 YALTNFLRGIPEFLILLICY---FGLSHLLNAQFDGAFVISP-FSAGVIALAVVFGAYSS 107 Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342 E+ R IAVP GQ+EAA A G+T + V LPQA R +P L + + NLLK++SL Sbjct: 108 EMFRGAFIAVPAGQIEAARAYGMTRLQTLWHVRLPQAWRICLPSLNNMWQNLLKDTSLVS 167 Query: 343 AVGFADLV 350 VG D++ Sbjct: 168 IVGLEDML 175 >gi|116750586|ref|YP_847273.1| polar amino acid ABC transporter inner membrane subunit [Syntrophobacter fumaroxidans MPOB] gi|116699650|gb|ABK18838.1| polar amino acid ABC transporter, inner membrane subunit [Syntrophobacter fumaroxidans MPOB] Length = 218 Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 37/115 (32%), Positives = 67/115 (58%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+S IA + AA+ AEIVR G+ +V GQ A + GL + + ++LPQA+R+++P Sbjct: 87 FVSTLIAFVAFEAAYFAEIVRGGVQSVSGGQAAAGYSCGLRYHQVQLYIILPQALRNMLP 146 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380 LT+Q + + +++SLA +G + + + + ++IE+ L +YL L + Sbjct: 147 ALTTQAVVIFQDTSLAYVIGLREFLRRVNLVDTREARSIELYLFAGTVYLVLCFL 201 >gi|124268065|ref|YP_001022069.1| amino acid ABC transporter permease, 3-TM region, His/Glu/Gln/Arg/opine [Methylibium petroleiphilum PM1] gi|124260840|gb|ABM95834.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Methylibium petroleiphilum PM1] Length = 229 Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 57/207 (27%), Positives = 96/207 (46%), Gaps = 21/207 (10%) Query: 183 MDTNAKIFVFSFVLGIV----LSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLI 238 + T ++ + S +G+V L++ SR H ++ T++I G P LV + Sbjct: 17 LATTLQLLLISLAIGLVAALPLAVLRVSASRWLHGP-------VWCFTYVIRGTPLLVQL 69 Query: 239 ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY----IALSCYTAAFIAEIVRSGLIAVPR 294 L Y L QF ++ S P S + +A + T A+ EI+ L A P Sbjct: 70 FLVYY------GLAQFEWVRASIAWPWLQSAWFCACLAFAVNTCAYTTEIIAGSLKATPH 123 Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354 G++EAA ALGL+ + R +LLP A+R +P ++ + +L +SLA V DL Sbjct: 124 GEVEAARALGLSRAQVWRRILLPSALRRALPAYGNEAVLMLHGTSLASVVTLLDLTGAAR 183 Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMI 381 + ++ E L +YL L++ + Sbjct: 184 EVNSRFYLPFEAFLTAAAVYLGLTLAL 210 >gi|320159033|ref|YP_004191411.1| arginine ABC transporterpermease ArtQ [Vibrio vulnificus MO6-24/O] gi|319934345|gb|ADV89208.1| arginine ABC transporter, permease protein ArtQ [Vibrio vulnificus MO6-24/O] Length = 229 Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 46/130 (35%), Positives = 75/130 (57%), Gaps = 1/130 (0%) Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321 VSP F+S IALS A++ ++ +R L AV +GQ EAA ALG++ + ++LPQA+R Sbjct: 87 VSP-FLSGVIALSLIFASYASQTIRGALKAVNKGQREAASALGMSKSRTFFRIVLPQAVR 145 Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 +P LT+Q+L LLK+++L +G DL+ T +A IYL ++++ Sbjct: 146 HALPGLTNQWLVLLKDTALVSLIGVTDLLKQAQLTSAATHEAFTWYATAAAIYLVITLVT 205 Query: 382 ALFMNRLNAK 391 + ++AK Sbjct: 206 QRAVKIIDAK 215 >gi|291618873|ref|YP_003521615.1| YecS [Pantoea ananatis LMG 20103] gi|291153903|gb|ADD78487.1| YecS [Pantoea ananatis LMG 20103] Length = 308 Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 42/137 (30%), Positives = 76/137 (55%), Gaps = 3/137 (2%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 +F + I L+ AA+ AEI+R G + V GQ+EAA ALGL+ + T ++LPQA+R+II Sbjct: 146 QFPAAVIGLTLVQAAYSAEIIRGGFLGVDHGQVEAASALGLSASRRTFRIILPQALRAII 205 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI---WMFIYLSLSIMI 381 P ++ ++L K +++ + +L I N+ + I ++++ W I ++ +I Sbjct: 206 PTAFNEIISLAKGTAMVYVLAMPELFYTIQMIYNRNQEVIPLLMVGAAWYLIITTVLSVI 265 Query: 382 ALFMNRLNAKIALKEKK 398 + R A+ +E K Sbjct: 266 QHSVERWLARSVSREPK 282 >gi|317049448|ref|YP_004117096.1| polar amino acid ABC transporter inner membrane subunit [Pantoea sp. At-9b] gi|316951065|gb|ADU70540.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea sp. At-9b] Length = 236 Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 40/104 (38%), Positives = 58/104 (55%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 FMS ++LS + A E RSG AVP+ +EAA +LG T R V +P A R +P Sbjct: 103 FMSATVSLSLFGGALCIEAFRSGFDAVPKATLEAARSLGYTRWGLFRHVQVPIAARICLP 162 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369 PLT+ NL K +S A + +L+ G I N T + +E++L+ Sbjct: 163 PLTNVLTNLFKTTSQASVITVPELMYAAGQIYNDTFRTLEVMLL 206 >gi|184156274|ref|YP_001844614.1| amino acid ABC transporter permease component [Lactobacillus fermentum IFO 3956] gi|227514071|ref|ZP_03944120.1| L-cystine ABC superfamily ATP binding cassette transporter, membrane protein YckJ [Lactobacillus fermentum ATCC 14931] gi|183227618|dbj|BAG28134.1| amino acid ABC transporter permease component [Lactobacillus fermentum IFO 3956] gi|227087552|gb|EEI22864.1| L-cystine ABC superfamily ATP binding cassette transporter, membrane protein YckJ [Lactobacillus fermentum ATCC 14931] Length = 229 Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 50/178 (28%), Positives = 96/178 (53%), Gaps = 14/178 (7%) Query: 189 IFVFSFVLGIVLSLFAT--RLSR-HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH 245 I + SFV+G+V+++ R+S+ H K A+ S ++ T +L+ L + + Sbjct: 23 IAIISFVIGLVIAVITALIRISKPHGKSKAVWAVVRAVFSFYVWLFRSTPLLVQL-FIVF 81 Query: 246 FDKPVLG-QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304 F P +G QFN + + I S T A+ +E +R L+++P Q +AA ++G Sbjct: 82 FGLPNVGIQFN---------AWTAGIITFSLNTGAYASETIRGALLSIPDSQWDAAYSIG 132 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362 +T+R+ ++ PQA+R +PPL++ ++ L+K++SLA ++ ++ V I + Q Sbjct: 133 MTYRQVLFRIVFPQALRVALPPLSNSFIGLVKDTSLASSITIVEMFMVSQQIASNNYQ 190 >gi|50121893|ref|YP_051060.1| ABC transporter permease [Pectobacterium atrosepticum SCRI1043] gi|49612419|emb|CAG75869.1| ABC transporter permease protein [Pectobacterium atrosepticum SCRI1043] Length = 221 Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 39/112 (34%), Positives = 67/112 (59%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + +AL+ Y+AA+ EI R+GL ++ GQ E A ALG+ H R V+LPQ +R+++P Sbjct: 91 FAAAVLALTLYSAAYCTEIFRAGLQSIDHGQWEGAKALGMRHTVILRRVVLPQVLRNMLP 150 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377 LT++ + L K +SLA + +L+ G + + + +EI+ + +Y L Sbjct: 151 ALTNRMIELAKVTSLASILAVNELMYQGRLLSSTYYRPLEILTVVALLYFVL 202 >gi|326381366|ref|ZP_08203060.1| ABC transporter substrate-binding/permease protein [Gordonia neofelifaecis NRRL B-59395] gi|326199613|gb|EGD56793.1| ABC transporter substrate-binding/permease protein [Gordonia neofelifaecis NRRL B-59395] Length = 581 Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 59/170 (34%), Positives = 95/170 (55%), Gaps = 15/170 (8%) Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285 T + GLP +V+I L L F P++ N GG+ F +AL+ AA+I EI Sbjct: 415 TDVFRGLPAVVVI-LMVGLGF-GPIVK--NLTGGN----PFWLGSVALALLAAAYIGEIF 466 Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345 R G+ +V GQMEAA ALG +H + RLV++PQ +R ++P L +Q++ L+K+SSL +G Sbjct: 467 RFGIQSVESGQMEAARALGFSHHSSMRLVVIPQGVRRVLPALVNQFIVLIKDSSLIYFLG 526 Query: 346 FA----DLVSVGGTIINQTGQAIEII---LIWMFIYLSLSIMIALFMNRL 388 DL +VG +G ++ L+++ + + L+ ++ NRL Sbjct: 527 LTLLQRDLFAVGKDFNANSGNLTPLVAAGLLYLVMTVPLTHLVNYIDNRL 576 Score = 40.8 bits (94), Expect = 0.39, Method: Compositional matrix adjust. Identities = 21/58 (36%), Positives = 31/58 (53%) Query: 91 VGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 G NT +A + I TI G L+ +S + + W RVY +VFR +P +VVI + Sbjct: 373 TGLPNTLKIALTSGILGTIGGMLLAMAGMSRTRWLRWPARVYTDVFRGLPAVVVILMV 430 >gi|319948858|ref|ZP_08022971.1| putative ABC transporter permease protein [Dietzia cinnamea P4] gi|319437460|gb|EFV92467.1| putative ABC transporter permease protein [Dietzia cinnamea P4] Length = 214 Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 43/133 (32%), Positives = 74/133 (55%), Gaps = 3/133 (2%) Query: 264 PEFMSLYIALSC---YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320 P+F +L I + + A ++AE+ R+G+ AVPRGQ EAA AL L + R V+LPQA+ Sbjct: 81 PQFTALQIGIGVIGVHYATYMAEVYRAGIDAVPRGQWEAAQALSLPAGRTWRAVVLPQAI 140 Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380 R+ +P L + ++L K++ A+ ++V+ + Q +E I + I+L S Sbjct: 141 RNTVPALGNYAISLFKDTPFLFAITVVEMVTAAQQYGARNFQYLEPITLAGVIFLLASYP 200 Query: 381 IALFMNRLNAKIA 393 ++ + RL +A Sbjct: 201 TSILIRRLEKSLA 213 >gi|291549386|emb|CBL25648.1| amino acid ABC transporter membrane protein, PAAT family (TC 3.A.1.3.-) [Ruminococcus torques L2-14] Length = 236 Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 38/122 (31%), Positives = 76/122 (62%) Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 + A+I+EI+RSG+ +V GQMEA A+GL+ + +++PQA+++I+P L +++++L+K Sbjct: 114 SGAYISEIMRSGIQSVDPGQMEAGRAVGLSFGTSMMKIVIPQAVKNILPTLGNEFISLIK 173 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 +S+ VG ADL I + + + + L+ IY++L ++I L + L + + Sbjct: 174 ETSVVSFVGAADLYVAFNYIGSNSYEFMVPYLVMALIYIALVLVITLLVKLLERSLKKSD 233 Query: 397 KK 398 ++ Sbjct: 234 RR 235 Score = 37.4 bits (85), Expect = 4.2, Method: Compositional matrix adjust. Identities = 27/110 (24%), Positives = 53/110 (48%), Gaps = 6/110 (5%) Query: 71 EIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRL-----SANKLV 125 ++D+ I + + + Y ++ G NT +A G+I +IGTL+ R+ + +++ Sbjct: 7 KVDKFIDIFLNQNGY-VKVVQGLHNTLLIAICGLIIGIVIGTLIATVRVIPKYKTLPRVL 65 Query: 126 AWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRG 175 IC YV +FR P +V + Y +L + + + + +F N G Sbjct: 66 NHICSFYVALFRGTPMVVQLLIFYYVLLPIFGVKITGVQVSMVVFGLNSG 115 >gi|227529781|ref|ZP_03959830.1| glutamate ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus vaginalis ATCC 49540] gi|227350265|gb|EEJ40556.1| glutamate ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus vaginalis ATCC 49540] Length = 486 Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 61/206 (29%), Positives = 103/206 (50%), Gaps = 28/206 (13%) Query: 160 DHSIVLPFGMFLNN-----RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEK 214 DH+I+ G+ N RGL +T++ +F+ + G++L + ++ F Sbjct: 271 DHTIL---GLLKTNHEALLRGL---WMTIELTVVGIIFAMIFGVILGVLGV-VNNKF--A 321 Query: 215 TGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALS 274 G + L+YI G+P +VL Y +G N IG P F++ + L+ Sbjct: 322 NGISSTLIYI----FRGIPMIVLAFFIY--------MGVPNVIGHKV--PLFLAGILTLT 367 Query: 275 CYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNL 334 A+I IV+ G +V +GQ EAA +LGL + KA V+ PQ + ++P L +Q++ Sbjct: 368 LDEGAYIGAIVKGGFESVSQGQWEAARSLGLPYSKALIKVIAPQGFKLMVPSLVNQFIIT 427 Query: 335 LKNSSLAVAVGFADLVSVGGTIINQT 360 LK++S+ A+G +L G II+Q Sbjct: 428 LKDTSILSAIGVMELTQTGTVIISQN 453 Score = 36.2 bits (82), Expect = 9.4, Method: Compositional matrix adjust. Identities = 33/102 (32%), Positives = 47/102 (46%), Gaps = 11/102 (10%) Query: 88 AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147 A+L G T L G+I A I G ++G + NK I + +FR IP +V+ FF Sbjct: 284 ALLRGLWMTIELTVVGIIFAMIFGVILGVLGVVNNKFANGISSTLIYIFRGIPMIVLAFF 343 Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI 189 +Y V +V+ H + L L TLT+D A I Sbjct: 344 IYMGVPNVI---GHKVPLFLAGIL--------TLTLDEGAYI 374 >gi|227327917|ref|ZP_03831941.1| putative amino-acid transport system permease protein [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 221 Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 52/203 (25%), Positives = 100/203 (49%), Gaps = 24/203 (11%) Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF---GLPTLVLIALKYQLHF 246 F+F LGI+++L R + K PL ++ F ++ G P LV + L + Sbjct: 31 FIFGLALGIIIALV-----RLYGPK-----PLKWVGDFYVWVIRGTPLLVQLFLIF---- 76 Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306 + F + I + A+ +EIVR +++VP+GQ AA +LG+ Sbjct: 77 -------YGLPSAGITLDAFPAALIGFTISVGAYSSEIVRGAILSVPKGQWNAAYSLGMN 129 Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 R+A R V+ PQ++ +PPL++ +++L+K++SLA + ++ I++ T + + + Sbjct: 130 GRQAIRWVIFPQSVFVSLPPLSNTFISLIKDTSLAAVITVPEMFLSAQRIVSVTYEPLIL 189 Query: 367 ILIWMFIYLSLSIMIALFMNRLN 389 + IYL S +++ +L Sbjct: 190 YVEAALIYLMFSTVLSQLQVKLE 212 >gi|226310677|ref|YP_002770571.1| amino acid ABC transporter permease protein [Brevibacillus brevis NBRC 100599] gi|226093625|dbj|BAH42067.1| amino acid ABC transporter permease protein [Brevibacillus brevis NBRC 100599] Length = 219 Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 48/173 (27%), Positives = 84/173 (48%), Gaps = 25/173 (14%) Query: 193 SFVLGIVLSLFATRLSR------HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246 S LG +++L A ++ H + + PLL F+ FGLP L Sbjct: 31 SIPLGFLITLLAKSSNKALAWLAHTYVYVMRGTPLLLQLLFICFGLPLL----------- 79 Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306 PV+G + V F++ + AA+ AEI R GL+++ +GQ EAA LG + Sbjct: 80 --PVVGDY------LVMDRFVAACVGFVLNYAAYFAEIFRGGLLSIDKGQYEAAQVLGFS 131 Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359 + T +++PQ R +P + ++ + L+K+++L AV +L+ T +N+ Sbjct: 132 KWQTTNKIIMPQMFRVALPAVANESITLVKDTALLYAVAVPELLHFAQTAVNR 184 >gi|148652491|ref|YP_001279584.1| polar amino acid ABC transporter inner membrane subunit [Psychrobacter sp. PRwf-1] gi|148571575|gb|ABQ93634.1| polar amino acid ABC transporter, inner membrane subunit [Psychrobacter sp. PRwf-1] Length = 224 Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 36/106 (33%), Positives = 65/106 (61%), Gaps = 4/106 (3%) Query: 245 HFDKPVLGQFNFIGGS--TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302 +F P++ +N + GS T F S +A + AA+ +E+VR+G+ ++ Q+ AA A Sbjct: 75 YFAVPMI--YNGLTGSYITFDTAFTSCVVAFMVFEAAYFSEVVRAGIQSIGSAQVNAAKA 132 Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348 LG+T+ + RL++LPQA R + P + Q + L ++++L A+G +D Sbjct: 133 LGMTYAQTMRLIILPQAFRKMTPLILQQCIILFQDTTLVFAIGLSD 178 >gi|322832575|ref|YP_004212602.1| polar amino acid ABC transporter inner membrane subunit [Rahnella sp. Y9602] gi|321167776|gb|ADW73475.1| polar amino acid ABC transporter, inner membrane subunit [Rahnella sp. Y9602] Length = 304 Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 39/119 (32%), Positives = 70/119 (58%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 +F + LS +A+ AEI+R G++ V GQ EAA ALGL + T ++LPQA+RSI+ Sbjct: 153 QFSVAVLGLSLVQSAYTAEIIRGGILGVEHGQHEAAAALGLPAYRRTFRIILPQALRSIL 212 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 P ++ ++L K +S+ + +L I N+T Q I ++++ YL ++ ++++ Sbjct: 213 PTGFNEVISLAKGTSIVYVLSMPELFYTVQVIYNRTQQVIPLLMVATIWYLLITTVLSV 271 >gi|225019523|ref|ZP_03708715.1| hypothetical protein CLOSTMETH_03476 [Clostridium methylpentosum DSM 5476] gi|224947744|gb|EEG28953.1| hypothetical protein CLOSTMETH_03476 [Clostridium methylpentosum DSM 5476] Length = 223 Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 51/147 (34%), Positives = 77/147 (52%), Gaps = 26/147 (17%) Query: 220 PLLYISTFLIFGLPTL-VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTA 278 PLL FL +GLP + V+I+ + V+G +F+GGS Sbjct: 64 PLLIQLFFLFYGLPKIGVMISAQ-----ACAVIG-LSFLGGS------------------ 99 Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338 ++AE RSG AV + Q+EA +++GLT R+ TR ++LPQA IP LT+ + LLK + Sbjct: 100 -YMAESFRSGFEAVGKTQLEAGMSIGLTRRQLTRYIILPQAFSVSIPSLTANAIFLLKET 158 Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIE 365 S+ A+ ADL+ V +I + E Sbjct: 159 SIFSAIALADLMFVAKDLIGMYYKTFE 185 >gi|167620109|ref|ZP_02388740.1| amino acid ABC transporter, permease protein [Burkholderia thailandensis Bt4] Length = 236 Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 55/171 (32%), Positives = 84/171 (49%), Gaps = 25/171 (14%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTG--KALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248 V LG+ L+L L G +A+P+L + + F LP L LH D Sbjct: 57 VLGVALGVALALATGALRGALIVVIGFFRAIPVLMLIFWTYFLLPVL--------LHADV 108 Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308 P L ++ ALS A++A V +G+ A GQ +A ++LGLT R Sbjct: 109 PGLA---------------AVVCALSLVGGAYLAHSVHAGIRAAGDGQRQAGLSLGLTRR 153 Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359 + R VLLPQA+R + P +Q+++L+K++SLA VG +L V + N+ Sbjct: 154 QTVRYVLLPQAVRIMTPSFVNQWVSLVKDTSLAYIVGVPELSFVATQVNNR 204 >gi|291450578|ref|ZP_06589968.1| amino acid ABC transporter [Streptomyces albus J1074] gi|291353527|gb|EFE80429.1| amino acid ABC transporter [Streptomyces albus J1074] Length = 139 Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 35/123 (28%), Positives = 75/123 (60%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + L+ + AA+ AEIVR+G+++V GQ++AA +LG+ + R ++LPQAMRSI+P ++ Sbjct: 12 LGLALHQAAYAAEIVRAGVLSVDAGQLQAAASLGIPRLRQIRRIVLPQAMRSILPNAANE 71 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++L K +S+ + +L I + G+ + ++++ Y+ L+ ++++ + + Sbjct: 72 IISLFKGTSIVSVMAIGELFYQVQVIYGRNGRVVPLLMVATLWYVLLTTVLSVVQHHVEK 131 Query: 391 KIA 393 + A Sbjct: 132 RFA 134 >gi|240950021|ref|ZP_04754329.1| hypothetical amino-acid ABC transporter permease protein [Actinobacillus minor NM305] gi|240295499|gb|EER46242.1| hypothetical amino-acid ABC transporter permease protein [Actinobacillus minor NM305] Length = 238 Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 58/211 (27%), Positives = 107/211 (50%), Gaps = 26/211 (12%) Query: 193 SFVLGIVLS-----LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247 SF++G+V++ + T ++ H + A+ +YIS +I G P LV I++ + + Sbjct: 42 SFIIGMVIAVGVALIRVTPVNGVLH-RIALAIVKVYIS--IIRGTPMLVQISVVF---YG 95 Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307 P +G F + P + I S A+ +E VR+ + +VP+GQ EA +G+T+ Sbjct: 96 LPAIGVF-------IDP-IPAAIIGFSLNIGAYASETVRAAISSVPKGQWEAGFTIGMTY 147 Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI- 366 + R ++ PQA+R +PPL++ ++ L K++SLA V ++ V + N + + + Sbjct: 148 MQTFRRIIAPQAVRVAVPPLSNTFIGLFKDTSLASVVTVTEMFRVAQQMANMSYDFLPVY 207 Query: 367 ----ILIWMFIYLSLSIMIAL--FMNRLNAK 391 ++ W F ++ I L NR AK Sbjct: 208 IEAGLIYWCFCWVLFYIQAKLETRFNRFVAK 238 >gi|239833357|ref|ZP_04681685.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium LMG 3301] gi|239821420|gb|EEQ92989.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium LMG 3301] Length = 215 Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 62/210 (29%), Positives = 103/210 (49%), Gaps = 18/210 (8%) Query: 188 KIFVFSFVLGIVLS--LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH 245 +I + +LG+V++ L A RLSR + L Y+S F G P LV + + L+ Sbjct: 22 QISALALILGLVVAAILVAGRLSRS---PILRGLAAAYVSVFR--GTPCLVQL---FILY 73 Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305 F P +G + P F + I L A+++E +R + +V RGQ EAA ++G Sbjct: 74 FGGPQVG-------INLEP-FAAGVIGLGLNIGAYMSESIRGAIQSVDRGQTEAARSVGF 125 Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365 + RLV+LPQA R +I PL + LLK S+L + +L I T + E Sbjct: 126 GRGQTMRLVVLPQAARLMIRPLGVNAIALLKGSALVSTISVVELTYTAQRFIGSTYKPFE 185 Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIALK 395 I + +Y+ + ++A ++ L+ + A + Sbjct: 186 IFGVAAILYMIIIYVVARGVDFLDKRFAAQ 215 >gi|197104924|ref|YP_002130301.1| ABC-type amino acid transport system, permease component [Phenylobacterium zucineum HLK1] gi|196478344|gb|ACG77872.1| ABC-type amino acid transport system, permease component [Phenylobacterium zucineum HLK1] Length = 358 Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 41/112 (36%), Positives = 63/112 (56%), Gaps = 3/112 (2%) Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342 E++R GL A+P GQ EAA ALGL + + R V+LPQA+ +IP LT+ + ++KN+SL + Sbjct: 242 EVIRGGLQALPPGQAEAARALGLGYWRTQRFVVLPQALALVIPSLTNTIIVMIKNTSLVL 301 Query: 343 AVGFADLVSVGGTII---NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 VG DL+S G + + A+E + +Y +L F L + Sbjct: 302 VVGLFDLISSGRAALADPEWSSPAMETYIFIASVYFALCFGFGRFARALERR 353 >gi|71064882|ref|YP_263609.1| ABC glutamate/aspartate transporter, inner membrane subunit GltK [Psychrobacter arcticus 273-4] gi|71037867|gb|AAZ18175.1| ABC glutamate/aspartate transporter, inner membrane subunit GltK [Psychrobacter arcticus 273-4] Length = 223 Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 53/185 (28%), Positives = 92/185 (49%), Gaps = 30/185 (16%) Query: 177 SFPTLT--MDTNAKIFVFSFV----LGIVLSLF------ATRLSRHFHEKTGKALPLLYI 224 ++P L M T K+ + V LG VL+L A + + +++PLL + Sbjct: 10 AYPGLMGGMLTTLKVLFLAIVGGISLGTVLALMRLSGIKALEIPAKLYVNYFRSVPLLLV 69 Query: 225 STFLIFGLPTLVL-IALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283 + F +P + +A KY L D F S +A + AA+ +E Sbjct: 70 LLWFYFAVPMIYFWVAGKY-LQLDT----------------AFTSCVVAFMMFEAAYFSE 112 Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343 +VR+G+ ++ GQ+ AA ALG+T+ + RL++LPQA R ++P + Q + L ++++L A Sbjct: 113 VVRAGIQSIGSGQVNAAKALGMTYGQTMRLIILPQAFRKMLPLILQQCIILFQDTTLVFA 172 Query: 344 VGFAD 348 +G D Sbjct: 173 IGLTD 177 >gi|150018982|ref|YP_001311236.1| polar amino acid ABC transporter, inner membrane subunit [Clostridium beijerinckii NCIMB 8052] gi|149905447|gb|ABR36280.1| polar amino acid ABC transporter, inner membrane subunit [Clostridium beijerinckii NCIMB 8052] Length = 210 Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 49/162 (30%), Positives = 82/162 (50%), Gaps = 21/162 (12%) Query: 195 VLGIVLSLF---ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251 ++ IVLS+F +SR+F + + +YI TF P L+ I + F P+ Sbjct: 25 IISIVLSMFFGIILAISRNFSKGIMGRIATIYIETFR--NTPNLLWI---LSIRFLVPIK 79 Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311 ++ I ++ + +T+A +AEI R G+ +V RGQ EAA + G T + Sbjct: 80 PMYSGI-------------LSFTLFTSAVMAEIFRGGMNSVSRGQYEAAYSQGFTKFQTL 126 Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353 R ++LPQ+ R IP + SQ + ++K++S AVG + G Sbjct: 127 RYIILPQSFRRCIPTVLSQSITVIKDTSFLWAVGIEEFTGKG 168 >gi|293375083|ref|ZP_06621373.1| ABC transporter, permease protein [Turicibacter sanguinis PC909] gi|292646277|gb|EFF64297.1| ABC transporter, permease protein [Turicibacter sanguinis PC909] Length = 220 Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 37/132 (28%), Positives = 81/132 (61%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 ++ + IAL ++A++AEI+R+G+ AV +GQMEAA +LG++ ++ PQA+++I+ Sbjct: 89 DWTCIVIALVINSSAYVAEIIRAGIQAVDKGQMEAAKSLGMSDVHMMTRIIFPQAVKNIL 148 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 P L ++++ ++K +SLA DL++ I + T + I ++I IY ++ ++ Sbjct: 149 PALGNEFIMMVKETSLASVFFINDLMTSYQMIKSATFKPIAPLMITAVIYFIVTFSLSKV 208 Query: 385 MNRLNAKIALKE 396 + + ++++ + Sbjct: 209 VKAMEGRLSVSD 220 >gi|212640130|ref|YP_002316650.1| amino acid ABC transporter permease [Anoxybacillus flavithermus WK1] gi|212561610|gb|ACJ34665.1| ABC-type amino acid transport system, permease component [Anoxybacillus flavithermus WK1] Length = 236 Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 56/201 (27%), Positives = 105/201 (52%), Gaps = 18/201 (8%) Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252 +F++G+V++L T L+R K + + Y+S I G P LV + + + + P +G Sbjct: 45 TFIIGLVIALL-TALARLSSIKALQWIARAYVSA--IRGTPLLVQL---FIIFYGLPTIG 98 Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312 + + I S A+ +EI+R+ ++++P+GQ EAA +LG+ + R Sbjct: 99 --------IIIDPLPAAIIGFSLNVGAYASEIIRAAILSIPKGQWEAAYSLGMDDVQTLR 150 Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI----EIIL 368 ++LPQA R +PPL++ +++L+K++SLA + +++ I + + E L Sbjct: 151 RIILPQAARVSVPPLSNTFISLVKDTSLASLILVSEMFRKAQEIAATNYEFLLLYTEAAL 210 Query: 369 IWMFIYLSLSIMIALFMNRLN 389 I+ I LSI+ +RLN Sbjct: 211 IYWIICFFLSIIQGNIESRLN 231 >gi|171059883|ref|YP_001792232.1| polar amino acid ABC transporter inner membrane subunit [Leptothrix cholodnii SP-6] gi|170777328|gb|ACB35467.1| polar amino acid ABC transporter, inner membrane subunit [Leptothrix cholodnii SP-6] Length = 216 Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 37/119 (31%), Positives = 66/119 (55%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +AL+ Y +A++ EI R ++A+P+GQ EAA +L L+ + R V+ PQA+R +PP Sbjct: 91 LALTFYASAYLTEIWRGCVMAIPKGQWEAADSLALSFGEKMRHVIGPQALRIAVPPTVGF 150 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 + ++K ++LA +GF +L G I N T + + +Y L ++ + +L Sbjct: 151 LVQVIKGTALASVIGFIELTKAGTMITNATFRPFTVYACVAVMYFVLCWPVSAYARKLE 209 >gi|90577482|ref|ZP_01233293.1| putative amino acid ABC transporter, permease protein [Vibrio angustum S14] gi|90440568|gb|EAS65748.1| putative amino acid ABC transporter, permease protein [Vibrio angustum S14] Length = 311 Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 38/112 (33%), Positives = 65/112 (58%) Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317 G S + S + + AA+IAE++R+GL ++ GQ EAA +LGL+ R V+ P Sbjct: 171 GSSQLWENLFSGILCVGLIAAAYIAEVIRAGLDSIDNGQWEAADSLGLSKFDRFRFVIFP 230 Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369 QA+ I+P L Q+++++K+SS+ + ++ VG + N +G EI L+ Sbjct: 231 QAIAGIVPALAGQFISIVKDSSIISLISIQEITFVGSEMANSSGLIFEIWLL 282 >gi|15892094|ref|NP_359808.1| amino acid ABC transporter permease protein [Rickettsia conorii str. Malish 7] gi|34580875|ref|ZP_00142355.1| amino acid ABC transporter permease protein [Rickettsia sibirica 246] gi|229586369|ref|YP_002844870.1| Amino acid ABC transporter permease protein [Rickettsia africae ESF-5] gi|238650695|ref|YP_002916548.1| amino acid ABC transporter permease protein [Rickettsia peacockii str. Rustic] gi|81774423|sp|Q92J96|GLNP_RICCN RecName: Full=Putative glutamine transport system permease protein glnP gi|15619217|gb|AAL02709.1| amino acid ABC transporter permease protein [Rickettsia conorii str. Malish 7] gi|28262260|gb|EAA25764.1| amino acid ABC transporter permease protein [Rickettsia sibirica 246] gi|228021419|gb|ACP53127.1| Amino acid ABC transporter permease protein [Rickettsia africae ESF-5] gi|238624793|gb|ACR47499.1| amino acid ABC transporter permease protein [Rickettsia peacockii str. Rustic] Length = 218 Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 48/166 (28%), Positives = 88/166 (53%), Gaps = 29/166 (17%) Query: 191 VFSFVLGIVLSLF------ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244 +F V+G++L++ A RL +F+ + PLL + + F P + I +K+ + Sbjct: 31 IFGLVIGMLLAICKVNKNRALRLFANFYTSIFRGTPLLIQLSIIYFASPYI--IGIKFSV 88 Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304 FM+ IA S + A+++E++R+G+ AV +GQ EAA AL Sbjct: 89 ---------------------FMAGAIAFSLNSGAYVSEVIRAGINAVDKGQFEAAEALA 127 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 + T+ ++LPQA+++I P L ++ +NL+K S++ +G DL+ Sbjct: 128 IPKFLITKDIILPQAVKNIFPSLVNELVNLIKESAIISMLGEMDLM 173 >gi|260597203|ref|YP_003209774.1| glutamine ABC transporter permease [Cronobacter turicensis z3032] gi|260216380|emb|CBA29430.1| Glutamine transport system permease protein glnP [Cronobacter turicensis z3032] Length = 219 Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 60/197 (30%), Positives = 105/197 (53%), Gaps = 16/197 (8%) Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256 GIV+ L A L+R + + L++I +I G P +V + Y F P+ F Sbjct: 33 GIVIGLLAG-LARSYGGWIANHIALVFIE--IIRGTPIVVQVMYIY---FALPM--AFPD 84 Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316 I T F + I + + A+IAEI R ++++ +G EA +ALGL+ R+ R V++ Sbjct: 85 IRIDT----FTAAVITIMINSGAYIAEITRGSVLSIHKGFSEAGLALGLSRRETIRHVIM 140 Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII----LIWMF 372 P A+R ++P L +Q + +K++SL + +G A+L G II +A+EI +I++ Sbjct: 141 PLALRRMLPALGNQLIISIKDTSLFIVIGAAELTRSGQEIIAGNFRALEIWTAVGVIYLI 200 Query: 373 IYLSLSIMIALFMNRLN 389 I L+I++ + R+ Sbjct: 201 ITQVLNIVLRILERRMK 217 >gi|330880664|gb|EGH14813.1| amino acid ABC transporter permease [Pseudomonas syringae pv. glycinea str. race 4] Length = 201 Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 39/109 (35%), Positives = 63/109 (57%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + I L+ + + ++EIVR L A+P GQ+EA A+GL ++ R VLLPQAMR I+P Sbjct: 91 FQAGAIGLTLFCGSHVSEIVRGALQAIPAGQLEAGKAIGLRFNQSLRYVLLPQAMRQILP 150 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374 + ++K S+L +G A+L+ +I +T +E L F++ Sbjct: 151 TWVNSSTEIVKASTLLSVIGVAELLLSTQQVIARTFMTLEFYLFAGFLF 199 >gi|239635972|ref|ZP_04676989.1| L-cystine transport system permease protein TcyL [Staphylococcus warneri L37603] gi|239598437|gb|EEQ80917.1| L-cystine transport system permease protein TcyL [Staphylococcus warneri L37603] Length = 229 Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 39/140 (27%), Positives = 79/140 (56%), Gaps = 4/140 (2%) Query: 254 FNFIGGSTVSPEFMS----LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309 FN I ++++P+ + I S + A+++E ++ GL++V Q+EAA +GL+ Sbjct: 81 FNAICHTSMNPDMVPPLLIAAITFSLHATAYLSESIKGGLLSVDTKQIEAAQTVGLSKWN 140 Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369 R ++ PQA +P + +Q++ LLK +SLA AV +++++ + N+ Q + + + Sbjct: 141 VYRRIVFPQAFGYALPNIENQFIMLLKGTSLAFAVQVTEIMAISTEMANEGYQFVPVYTV 200 Query: 370 WMFIYLSLSIMIALFMNRLN 389 Y +L+I+I L ++L Sbjct: 201 AAIFYWALAIIIELIFHKLE 220 >gi|227820381|ref|YP_002824352.1| ABC transporter permease [Sinorhizobium fredii NGR234] gi|227339380|gb|ACP23599.1| putative permease component of ABC transporter [Sinorhizobium fredii NGR234] Length = 219 Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 37/114 (32%), Positives = 64/114 (56%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P +++ +AL ++AAF+ EI R + A+ +GQ EA+ +LG+ + R V+LPQAMR Sbjct: 84 PAWLAAGLALILWSAAFLGEIWRGCVEAIAKGQWEASASLGMGRLQQMRYVILPQAMRIA 143 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377 + P + ++K ++L +GF +L G + N T Q + + IY +L Sbjct: 144 VAPTVGFSVQVIKGTALTSIIGFVELSKAGTVVTNATFQPFTVYGLVALIYFAL 197 >gi|146311739|ref|YP_001176813.1| polar amino acid ABC transporter, inner membrane subunit [Enterobacter sp. 638] gi|145318615|gb|ABP60762.1| amino acid ABC transporter membrane protein, PAAT family [Enterobacter sp. 638] Length = 306 Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 37/134 (27%), Positives = 76/134 (56%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 +F + + L+ +A+ AEI+R G + V GQ EAA ALGL + T ++LPQA+R+I+ Sbjct: 146 QFSTAVVGLTLVQSAYTAEIIRGGFLGVDHGQYEAAAALGLPAWRRTLRIILPQALRTIL 205 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 P ++ ++L K +++ + +L I N+T + I ++++ YL ++ +++ Sbjct: 206 PAGFNEIISLAKGTAMVYVLAMPELFYTIQMIYNRTQEVIPLLMVGAVWYLVITTVLSAI 265 Query: 385 MNRLNAKIALKEKK 398 + + +A E++ Sbjct: 266 QHIVERGLARSERR 279 >gi|300853856|ref|YP_003778840.1| putative amino acid ABC transporter permease [Clostridium ljungdahlii DSM 13528] gi|300433971|gb|ADK13738.1| predicted amino acid ABC transporter, permease component [Clostridium ljungdahlii DSM 13528] Length = 198 Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 52/204 (25%), Positives = 98/204 (48%), Gaps = 30/204 (14%) Query: 181 LTMDTNAKIFVFSFVLGIVLSLF------ATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234 +T++ + +LG+ L+L +L F+ + PLL F +GLP Sbjct: 1 MTIELTVITLILGTMLGVFLALLKLSKNIVLKLVSSFYTWIFRGTPLLLQLFFFYYGLP- 59 Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294 I ++ F +LG + L+C A++AEI+R G+ ++ + Sbjct: 60 --FIGIELT-PFTAAILG------------------LGLNC--GAYMAEIIRGGIQSINK 96 Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354 GQ EAA ALG ++ + R ++LPQ + IIPP+ ++++++LK++SL + +L+ Sbjct: 97 GQFEAAKALGFSYVETMRKIILPQTWKIIIPPVGNEFISILKDTSLVSTIAMVELMRSAQ 156 Query: 355 TIINQTGQAIEIILIWMFIYLSLS 378 I + I + L +YL ++ Sbjct: 157 QIYASSFDPISVFLTAAILYLIMT 180 >gi|259906953|ref|YP_002647309.1| transport system permease protein [Erwinia pyrifoliae Ep1/96] gi|224962575|emb|CAX54030.1| transport system permease protein [Erwinia pyrifoliae Ep1/96] gi|283476747|emb|CAY72582.1| putative ABC transport system, inner membrane component [Erwinia pyrifoliae DSM 12163] Length = 366 Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 33/76 (43%), Positives = 52/76 (68%) Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335 + +A++AE+VR GL A+P+GQ E A +L L + K LV+LPQA++ +IP L + + L Sbjct: 240 FQSAYVAEVVRGGLQALPKGQYEGAESLALGYWKTQGLVILPQALKLVIPGLVNTIIALF 299 Query: 336 KNSSLAVAVGFADLVS 351 K++SL + +G DL S Sbjct: 300 KDTSLVIIIGLFDLFS 315 >gi|220920917|ref|YP_002496218.1| polar amino acid ABC transporter inner membrane subunit [Methylobacterium nodulans ORS 2060] gi|219945523|gb|ACL55915.1| polar amino acid ABC transporter, inner membrane subunit [Methylobacterium nodulans ORS 2060] Length = 236 Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 50/160 (31%), Positives = 93/160 (58%), Gaps = 23/160 (14%) Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF---GLPTLVLIALKYQLHFDKP 249 +FV+G +++L T +G A+ L + +T L++ GLP ++ + + +F P Sbjct: 39 AFVIGTLIALART---------SGHAV-LQWPATVLVYVVRGLPPVMAV---FWAYFALP 85 Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309 L IG P F +L AL Y +A+++EI+R+G+ A+P+GQ EA+ ALG+ + + Sbjct: 86 AL-----IGRPI--PGFWTLLAALILYESAYLSEILRAGIRALPKGQFEASRALGMGYLQ 138 Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349 TR ++LPQ +++P + SQ+++ +K +SL + +L Sbjct: 139 TTRDIVLPQVYYTMLPSMVSQFVSTIKETSLGYIIAVQEL 178 Score = 43.9 bits (102), Expect = 0.049, Method: Compositional matrix adjust. Identities = 25/73 (34%), Positives = 41/73 (56%), Gaps = 2/73 (2%) Query: 90 LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 L G T LA S + A +IGTL+ R S + ++ W V V V R +PP++ +F+ Y Sbjct: 22 LGGLAMTLILAVSAIAAAFVIGTLIALARTSGHAVLQWPATVLVYVVRGLPPVMAVFWAY 81 Query: 150 KSVLSVL--PIPD 160 ++ +++ PIP Sbjct: 82 FALPALIGRPIPG 94 >gi|153011666|ref|YP_001372880.1| polar amino acid ABC transporter, inner membrane subunit [Ochrobactrum anthropi ATCC 49188] gi|151563554|gb|ABS17051.1| polar amino acid ABC transporter, inner membrane subunit [Ochrobactrum anthropi ATCC 49188] Length = 595 Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 40/133 (30%), Positives = 75/133 (56%), Gaps = 3/133 (2%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + ++ L+ +AF AEIVR G+++V +GQ EAA ALGL + ++LPQAMRSI+P Sbjct: 166 FAAAFLGLTLNQSAFFAEIVRGGILSVDQGQHEAAAALGLPRNRQALRIVLPQAMRSILP 225 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL---IWMFIYLSLSIMIA 382 ++ + L K +S+ + +L I + + I +++ +W + +++ + Sbjct: 226 TGFNEIIGLAKGTSMVYVLALPELFYTVQVIYRRNLEVIPLLMVATVWYLVIMTVLSVAQ 285 Query: 383 LFMNRLNAKIALK 395 ++ R AK A++ Sbjct: 286 YYIERYFAKGAVR 298 >gi|326384738|ref|ZP_08206415.1| amino acid ABC transporter membrane protein [Gordonia neofelifaecis NRRL B-59395] gi|326196546|gb|EGD53743.1| amino acid ABC transporter membrane protein [Gordonia neofelifaecis NRRL B-59395] Length = 485 Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 53/171 (30%), Positives = 91/171 (53%), Gaps = 14/171 (8%) Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALK 241 T+ T + SF +G+V++L L+R + + YIS +I G P LV + Sbjct: 283 TITTTIPLAAVSFAIGLVIALLVA-LARMADNRVLAWIARAYIS--IIRGTPLLVQL--- 336 Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301 + + + P LG F P + IA S + AEI+RS +++VP+GQ EAA Sbjct: 337 FIIFYALPELG-FKV-------PPLPAAAIAFSLNVGGYAAEIIRSAIMSVPKGQSEAAQ 388 Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352 +G+++ R ++LPQA R +P L++ ++L+K++SLA + +L+ V Sbjct: 389 TIGMSYATTMRRIILPQAARIAVPGLSNTLISLVKDTSLASTILVTELLRV 439 Score = 40.4 bits (93), Expect = 0.54, Method: Compositional matrix adjust. Identities = 19/60 (31%), Positives = 34/60 (56%), Gaps = 4/60 (6%) Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSV----LSVLPIPDHSIV 164 +I LV R++ N+++AWI R Y+ + R P LV +F ++ ++ V P+P +I Sbjct: 300 VIALLVALARMADNRVLAWIARAYISIIRGTPLLVQLFIIFYALPELGFKVPPLPAAAIA 359 >gi|322373066|ref|ZP_08047602.1| polar amino acid uptake (PAAT) family ABC transporter, permease protein [Streptococcus sp. C150] gi|321278108|gb|EFX55177.1| polar amino acid uptake (PAAT) family ABC transporter, permease protein [Streptococcus sp. C150] Length = 213 Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 35/91 (38%), Positives = 57/91 (62%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IA + AA+ AEI R G++A+P+GQ EAA L L+ + R V+LPQ ++ ++P + ++ Sbjct: 89 IAFTLNYAAYFAEIFRGGILAIPKGQYEAAKMLKLSPFQTIRYVILPQVVKIVLPSIFNE 148 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361 +NL+K+SSL +G DL+ T N+ Sbjct: 149 IINLVKDSSLVYVLGVGDLLLESRTAANRDA 179 >gi|254488499|ref|ZP_05101704.1| amino acid ABC transporter, permease protein [Roseobacter sp. GAI101] gi|214045368|gb|EEB86006.1| amino acid ABC transporter, permease protein [Roseobacter sp. GAI101] Length = 431 Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 35/91 (38%), Positives = 60/91 (65%), Gaps = 1/91 (1%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I ++ + +A+IAE++R GL A+PRGQ E A +LGL + ++ RL++LPQA++ IP + + Sbjct: 301 IMITMFASAYIAEVIRGGLAALPRGQYEGAESLGLDYAQSMRLIILPQALKISIPGIVNV 360 Query: 331 YLNLLKNSSLAVAVGFADLVS-VGGTIINQT 360 + L K+++L + DLV + G I+ T Sbjct: 361 AVGLFKDTTLVSIISMFDLVGMIRGPILAST 391 >gi|119387392|ref|YP_918426.1| polar amino acid ABC transporter, inner membrane subunit [Paracoccus denitrificans PD1222] gi|119377967|gb|ABL72730.1| amino acid ABC transporter membrane protein 2, PAAT family [Paracoccus denitrificans PD1222] Length = 214 Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 44/136 (32%), Positives = 71/136 (52%), Gaps = 1/136 (0%) Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316 IGG V P ++ +A++ Y+ A++ EI + + AVP+ Q EAA L LT + V+L Sbjct: 77 IGGFEV-PALVAAGLAMTLYSGAYLGEIWKGCIQAVPKTQWEAAECLALTPAQRFVYVVL 135 Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376 PQA+R IPP + ++KN+S AV + F DL I N T + + IY + Sbjct: 136 PQALRIAIPPTVGFMVQIVKNTSYAVVINFFDLTYSAKVINNSTFMPFTVFTLAAAIYFA 195 Query: 377 LSIMIALFMNRLNAKI 392 + +++ R K+ Sbjct: 196 ICFPMSVLAQRYERKL 211 >gi|310814815|ref|YP_003962779.1| polar amino acid ABC transporter, inner membrane subunit [Ketogulonicigenium vulgare Y25] gi|308753550|gb|ADO41479.1| polar amino acid ABC transporter, inner membrane subunit [Ketogulonicigenium vulgare Y25] Length = 226 Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 41/131 (31%), Positives = 75/131 (57%), Gaps = 3/131 (2%) Query: 254 FNFIGGSTVS---PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 F F G S+V P ++ AL A+ AEI+R+G+ A+P+GQ+EAA ALGL+ + Sbjct: 75 FLFFGMSSVGVRMPIMVAAIFALVVNVGAYTAEIIRAGMDAIPKGQIEAAEALGLSQFQI 134 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370 R ++L A+ + P LTSQ++ ++ +S+ + +L V I + T ++ E ++ Sbjct: 135 YRDIILMPAIEKVYPALTSQFVLMMLTTSICSQISAEELTGVANNIQSNTFRSFETYIVI 194 Query: 371 MFIYLSLSIMI 381 Y+ +++M+ Sbjct: 195 GLFYIGITLMM 205 >gi|307308378|ref|ZP_07588083.1| polar amino acid ABC transporter, inner membrane subunit [Sinorhizobium meliloti BL225C] gi|306901179|gb|EFN31786.1| polar amino acid ABC transporter, inner membrane subunit [Sinorhizobium meliloti BL225C] Length = 222 Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 68/197 (34%), Positives = 103/197 (52%), Gaps = 18/197 (9%) Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALK 241 T+ +A V LGIV L R+SR +T + + YI LI P LV + Sbjct: 24 TLRMSAISMVAGLALGIVFML--MRISRLGPVRT---IAIGYIE--LIRNTPFLVQV--- 73 Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301 + ++F P LG +GG E L ++L+C AA+ AEIVR G+ ++ GQ+EA Sbjct: 74 FFIYFGMPTLG--IKLGGE----EAAILAMSLNC--AAYAAEIVRGGVQSIRPGQIEAGR 125 Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361 ALGL R ++ A+R++ P L SQ++ ++ NSSL +V +L + T+ QT Sbjct: 126 ALGLHTIDIYRFIVFRPAIRAVYPALCSQFILMMLNSSLVASVSAEELTYMAQTLDAQTF 185 Query: 362 QAIEIILIWMFIYLSLS 378 ++ EI + IYL LS Sbjct: 186 RSFEIYFVLGAIYLLLS 202 >gi|186895949|ref|YP_001873061.1| glutamine ABC transporter permease [Yersinia pseudotuberculosis PB1/+] gi|186698975|gb|ACC89604.1| polar amino acid ABC transporter, inner membrane subunit [Yersinia pseudotuberculosis PB1/+] Length = 218 Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 39/118 (33%), Positives = 70/118 (59%) Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 + A+IAEI R ++++ G EA +ALGL+ R V+ P A+R ++PPL +Q++ +K Sbjct: 100 SGAYIAEITRGAVLSIHSGFREAGLALGLSQRGTLLYVIAPLALRRMLPPLGNQWIVSIK 159 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394 ++SL + +G A+L II +A+EI IYL +++ ++ + RL K+ + Sbjct: 160 DTSLFIVIGVAELTRQSQEIIAGNFRAMEIWSAVAVIYLIITLALSFVLRRLERKLKI 217 >gi|158423074|ref|YP_001524366.1| ABC transporter permease protein [Azorhizobium caulinodans ORS 571] gi|158329963|dbj|BAF87448.1| ABC transporter permease protein [Azorhizobium caulinodans ORS 571] Length = 213 Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 42/132 (31%), Positives = 70/132 (53%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 + ++ + + + +A++ EI R + AVPRGQ EA+ AL L + R V+LPQA+R +P Sbjct: 82 WAAVSVGFTLHASAYLGEIWRGSIEAVPRGQTEASHALSLGYVSRMRDVVLPQAIRISLP 141 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 + L+K +SLA VGF +L G + NQ Q + + I +Y + ++LF Sbjct: 142 ATIGFLVQLIKGTSLASIVGFTELARAGNIVSNQIFQPLLVFGIVGILYFLMCWPLSLFG 201 Query: 386 NRLNAKIALKEK 397 L + A + Sbjct: 202 AHLERRFATPAR 213 >gi|83721079|ref|YP_442969.1| amino acid ABC transporter permease [Burkholderia thailandensis E264] gi|83654904|gb|ABC38967.1| amino acid ABC transporter, permease protein [Burkholderia thailandensis E264] Length = 247 Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 55/171 (32%), Positives = 84/171 (49%), Gaps = 25/171 (14%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTG--KALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248 V LG+ L+L L G +A+P+L + + F LP L LH D Sbjct: 42 VLGVALGVALALATGALRGALIVVIGFFRAIPVLMLIFWTYFLLPVL--------LHADV 93 Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308 P L ++ ALS A++A V +G+ A GQ +A ++LGLT R Sbjct: 94 PGLA---------------AVVCALSLVGGAYLAHSVHAGIRAAGDGQRQAGLSLGLTRR 138 Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359 + R VLLPQA+R + P +Q+++L+K++SLA VG +L V + N+ Sbjct: 139 QTVRYVLLPQAVRIMTPSFVNQWVSLVKDTSLAYIVGVPELSFVATQVNNR 189 >gi|228989959|ref|ZP_04149935.1| Amino acid ABC transporter [Bacillus pseudomycoides DSM 12442] gi|228769783|gb|EEM18370.1| Amino acid ABC transporter [Bacillus pseudomycoides DSM 12442] Length = 226 Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 46/157 (29%), Positives = 91/157 (57%), Gaps = 14/157 (8%) Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244 T + + +F +G++L+ T L+R + + + +Y+S +I G P LV + + + Sbjct: 27 TTIPLTLITFAIGLILATL-TALARISGSRLLQWIARIYVS--IIRGTPLLVQL---FII 80 Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304 + P L + P + + I S A+ +EI+R+ ++++P+GQ EAA +G Sbjct: 81 FYGLPTLK-------IEIDP-YTAAIIGFSLNVGAYASEIIRASILSIPKGQWEAAYTIG 132 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341 +T+ +A + ++LPQA R IPPL++ +++L+K++SLA Sbjct: 133 MTYPQALKRIILPQATRVSIPPLSNTFISLVKDTSLA 169 Score = 40.0 bits (92), Expect = 0.58, Method: Compositional matrix adjust. Identities = 16/41 (39%), Positives = 26/41 (63%) Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 I+ TL R+S ++L+ WI R+YV + R P LV +F ++ Sbjct: 41 ILATLTALARISGSRLLQWIARIYVSIIRGTPLLVQLFIIF 81 >gi|91205978|ref|YP_538333.1| amino acid ABC transporter permease [Rickettsia bellii RML369-C] gi|122425299|sp|Q1RHC0|GLNP_RICBR RecName: Full=Putative glutamine transport system permease protein glnP gi|91069522|gb|ABE05244.1| Amino acid ABC transporter permease protein [Rickettsia bellii RML369-C] Length = 218 Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 49/167 (29%), Positives = 86/167 (51%), Gaps = 29/167 (17%) Query: 191 VFSFVLGIVLSLF------ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244 +F V+G++L+L A RL F+ + PLL + + F P L I +K+ + Sbjct: 31 IFGLVIGVLLALCKVNKNRALRLFADFYTSIFRGTPLLIQLSIIYFASPYL--IGIKFTV 88 Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304 FM+ I+ S + A+++E++R+G+ AV +GQ EAA AL Sbjct: 89 ---------------------FMAGAISFSLNSGAYVSEVIRAGINAVDKGQFEAAEALA 127 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 + + ++LPQA+++I P LT++ +NL+K S++ G DL+ Sbjct: 128 IPKFLIMKDIILPQAIKNIFPSLTNELINLIKESAIISMFGEMDLMK 174 >gi|93005167|ref|YP_579604.1| amino acid ABC transporter permease [Psychrobacter cryohalolentis K5] gi|92392845|gb|ABE74120.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Psychrobacter cryohalolentis K5] Length = 222 Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 41/133 (30%), Positives = 73/133 (54%), Gaps = 18/133 (13%) Query: 217 KALPLLYISTFLIFGLPTLVL-IALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSC 275 +++PLL + + F +P + +A KY L D F S +A Sbjct: 61 RSVPLLLVLLWFYFAVPMIYFWVAGKY-LQLDT----------------AFTSCVVAFMM 103 Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335 + AA+ +E+VR+G+ ++ GQ+ AA ALG+T+ + RL++LPQA R ++P + Q + L Sbjct: 104 FEAAYFSEVVRAGIQSIGSGQVNAAKALGMTYGQTMRLIILPQAFRKMLPLILQQCIILF 163 Query: 336 KNSSLAVAVGFAD 348 ++++L A+G D Sbjct: 164 QDTTLVFAIGLTD 176 >gi|319782303|ref|YP_004141779.1| polar amino acid ABC transporter inner membrane subunit [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317168191|gb|ADV11729.1| polar amino acid ABC transporter, inner membrane subunit [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 255 Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 46/175 (26%), Positives = 90/175 (51%), Gaps = 2/175 (1%) Query: 226 TFLIFGLPTLVLIALKY--QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283 T L+ G+P L++I L + + F V+ F + G + F+ IA+ + A+ E Sbjct: 81 TSLVRGVPELLIIYLLFFSSVEFVTKVVTAFGYAGVAESGYAFVIAVIAIGAISGAYSTE 140 Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343 +VR L A+P G +EAA ALGL+ + R ++ PQ +R +P + + + +K+++L Sbjct: 141 VVRGALGAIPNGHIEAARALGLSGGRIFRRIIAPQMLRIAVPGINNVWQTTIKDTALVSV 200 Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 VG +L+ + N T LI +YL+++++ + + + ++ +K Sbjct: 201 VGLQELMRISFIGANSTRHPFIFYLIAAVVYLAITLVSQAGFDGIERLLRVRTRK 255 >gi|295395027|ref|ZP_06805237.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Brevibacterium mcbrellneri ATCC 49030] gi|294972094|gb|EFG47959.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Brevibacterium mcbrellneri ATCC 49030] Length = 529 Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 53/177 (29%), Positives = 85/177 (48%), Gaps = 27/177 (15%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 + PLL + F FGLP L+ T F++ L+ Sbjct: 375 RGTPLLVWAFFFYFGLPQLM-----------------------GTKGDVFIAGVATLALN 411 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 A++ EIVR G+ AV GQMEAA +LGL K+ + V++PQA++ P + +Q + LK Sbjct: 412 AGAYLTEIVRGGIQAVDVGQMEAARSLGLPWGKSMQKVVVPQAVKIATPSIINQLVITLK 471 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN----RLN 389 +SSL + +GFA+L+ + + E+++I IY + ++ N RLN Sbjct: 472 DSSLLLTIGFAELLYQAQQVYASNFRTTEMLIIVGVIYFVIITVLTWIANIVDRRLN 528 Score = 36.6 bits (83), Expect = 7.1, Method: Compositional matrix adjust. Identities = 21/62 (33%), Positives = 33/62 (53%) Query: 88 AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147 A+ G NT + A ++G + G ++S N+++A I V+V +FR P LV FF Sbjct: 326 ALAKGLWNTLAITVVSFAIAMVLGLVFGFMKVSQNRVLAGIASVFVAIFRGTPLLVWAFF 385 Query: 148 LY 149 Y Sbjct: 386 FY 387 >gi|167033328|ref|YP_001668559.1| polar amino acid ABC transporter inner membrane subunit [Pseudomonas putida GB-1] gi|166859816|gb|ABY98223.1| polar amino acid ABC transporter, inner membrane subunit [Pseudomonas putida GB-1] Length = 239 Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 61/184 (33%), Positives = 95/184 (51%), Gaps = 23/184 (12%) Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTF--LIFGLP---TLVLIALKYQLHFDKPV 250 LG+V++L A ++ K LP + +TF + GLP TL++I Q+ K + Sbjct: 40 LGLVVALAA---------RSRKRLPRAWATTFSTVFRGLPELLTLLIIYYGCQIAAQK-I 89 Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 L + G ++ F++ IA S AAF +EI + +P+GQ+EA ALGL+ R Sbjct: 90 LAAMGYEGEFLIN-TFLAAMIAFSLVFAAFSSEIWLAAFKTLPKGQLEACSALGLSKRTG 148 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370 VLLPQ R +P L++ +L+LLK++SL + DL + QT A+ + Sbjct: 149 FFKVLLPQLTRIALPGLSNNWLSLLKDTSLVSTISLVDL-------MRQTNLAVSVTKEP 201 Query: 371 MFIY 374 MF Y Sbjct: 202 MFFY 205 >gi|113868713|ref|YP_727202.1| ABC transporter permease [Ralstonia eutropha H16] gi|113527489|emb|CAJ93834.1| ABC-type transporter, permease component: PAAT family [Ralstonia eutropha H16] Length = 216 Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 59/202 (29%), Positives = 95/202 (47%), Gaps = 18/202 (8%) Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249 F ++G+ L+L +R R TG Y+ L+ G+P V++ + Y Sbjct: 27 FAGGALVGVPLALARSRGGRVLRTLTGA-----YVQ--LVQGVPLPVIMFVVY------- 72 Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309 F G P ++ IA++ Y++A++ EI + + AVPR Q EAA L LT + Sbjct: 73 ----FGISVGGFELPALVAAGIAMTAYSSAYLGEIWKGCIQAVPRTQWEAAECLALTPLQ 128 Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369 V+LPQA R I P S + ++KNSS AV +GF DL + N T + + I Sbjct: 129 RAVYVILPQAARIAIAPTVSFLVQIVKNSSYAVVIGFFDLTYSARVVNNSTFKPFLVFTI 188 Query: 370 WMFIYLSLSIMIALFMNRLNAK 391 +Y ++ ++ RL + Sbjct: 189 AAALYFAICYPLSSLSYRLERR 210 >gi|88601349|ref|YP_501527.1| amino acid ABC transporter permease [Methanospirillum hungatei JF-1] gi|88186811|gb|ABD39808.1| amino acid ABC transporter membrane protein 1, PAAT family [Methanospirillum hungatei JF-1] Length = 223 Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 41/135 (30%), Positives = 76/135 (56%), Gaps = 7/135 (5%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P F + L + AA+ +++ R + ++ GQM AA +LG++ +A + ++LPQA+R Sbjct: 85 PAFYVGAVVLGLWGAAYQSQVFRGAIQSISEGQMIAARSLGMSRFQAIKSIILPQALRIA 144 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 +P ++QY +L SS+ A+G A+L++ I++QT + M IYL+ +++ L Sbjct: 145 LPGWSNQYPEILTESSVCYAIGVAELLTRSSQIVSQT-------YVTMPIYLACAVIFIL 197 Query: 384 FMNRLNAKIALKEKK 398 + I + EKK Sbjct: 198 LSYAGTSCIHMVEKK 212 >gi|218462904|ref|ZP_03502995.1| nopaline ABC transporter, permease protein [Rhizobium etli Kim 5] Length = 249 Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 47/156 (30%), Positives = 84/156 (53%), Gaps = 2/156 (1%) Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285 T+ G P LV + L Y P++ Q +F+ P F +IA + +AA E++ Sbjct: 57 TYAFRGTPLLVQLFLIYYGIGQLPLVRQ-SFLWAVMREP-FWCAFIAFTLNSAAHTTEVL 114 Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345 R G+ AVPRGQ+EAA +LGL+ RL++ P +R +P ++ + +LK SSLA + Sbjct: 115 RGGIQAVPRGQIEAAKSLGLSRFHTARLIVFPLTLRIALPAYANEVVGMLKASSLASTIT 174 Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 ++ + ++++T E+ + Y+ L+++I Sbjct: 175 LLEVTGLARQLVSETFAPYEVFIAAGAFYMLLTLLI 210 >gi|166031609|ref|ZP_02234438.1| hypothetical protein DORFOR_01309 [Dorea formicigenerans ATCC 27755] gi|166028586|gb|EDR47343.1| hypothetical protein DORFOR_01309 [Dorea formicigenerans ATCC 27755] Length = 236 Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 37/122 (30%), Positives = 77/122 (63%) Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 + A+I+EI+RSG+ +V GQMEA A+GL+ + +++PQA+++I+P L +++++L+K Sbjct: 114 SGAYISEIMRSGIQSVDSGQMEAGRAVGLSFGTSMMKIVIPQAVKNILPTLGNEFISLIK 173 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 +S+ VG ADL I + + + + L+ IY++L ++I+L + + + + Sbjct: 174 ETSVVSFVGAADLYVAFNYIGSNSYEFMVPYLVMALIYIALVLIISLLIKLMERSLKKSD 233 Query: 397 KK 398 ++ Sbjct: 234 RR 235 Score = 40.0 bits (92), Expect = 0.70, Method: Compositional matrix adjust. Identities = 26/91 (28%), Positives = 47/91 (51%), Gaps = 6/91 (6%) Query: 71 EIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRL-----SANKLV 125 ++++ I + + YA I G NT +A +G+I I+GTL+ R+ + K++ Sbjct: 7 KVNKFIEIFVEQNGYAKVIQ-GLQNTLLIAVTGLIIGIIVGTLIATVRVLPKYKTLPKVL 65 Query: 126 AWICRVYVEVFRNIPPLVVIFFLYKSVLSVL 156 IC YV +FR P +V + Y +L ++ Sbjct: 66 NGICSFYVALFRGTPMVVQLLVFYYVLLPII 96 >gi|120406518|ref|YP_956347.1| polar amino acid ABC transporter inner membrane subunit [Mycobacterium vanbaalenii PYR-1] gi|119959336|gb|ABM16341.1| amino acid ABC transporter substrate-binding protein, PAAT family / amino acid ABC transporter membrane protein, PAAT family [Mycobacterium vanbaalenii PYR-1] Length = 503 Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 66/208 (31%), Positives = 104/208 (50%), Gaps = 20/208 (9%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 + SFV+G+V++L L+R L YIS +I G P LV + + + F P Sbjct: 310 IISFVIGLVIAL-GVALARLSSNVVLTNLARFYIS--VIRGTPLLVQL---FIVFFALP- 362 Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 +F G + P F + IA S + AEI+RS + ++P+GQ EAA +GL + Sbjct: 363 --EF----GVRIDP-FPAAVIAFSLNVGGYAAEIIRSAIQSIPKGQWEAAETIGLNYAGT 415 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ-----AIE 365 R ++LPQA R +PPL++ ++L+K++SLA + +L+ I T + Sbjct: 416 LRRIILPQATRVAVPPLSNTLISLVKDTSLASTILVTELLRQAQIIAAPTFEFFALYGTA 475 Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIA 393 + W+ I L LS A F RL +A Sbjct: 476 AVYYWV-ICLVLSFGQARFERRLERYVA 502 >gi|121606946|ref|YP_984275.1| polar amino acid ABC transporter inner membrane subunit [Polaromonas naphthalenivorans CJ2] gi|120595915|gb|ABM39354.1| amino acid ABC transporter membrane protein 2, PAAT family [Polaromonas naphthalenivorans CJ2] Length = 216 Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 45/164 (27%), Positives = 84/164 (51%), Gaps = 5/164 (3%) Query: 238 IALKYQLHFDKPVLGQF--NFIGGSTVSPEFMSLYIALSC---YTAAFIAEIVRSGLIAV 292 +AL Q+ P+L Q + G S + + +L+ A C Y +A++ EI R ++++ Sbjct: 53 VALYVQVFQGTPLLMQLFLTYFGLSMLGIDTSALFAASVCLTLYASAYLTEIWRGCVLSI 112 Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352 PRGQ EAA +L + + R ++LPQA R I P + ++K ++LA +GF ++ Sbjct: 113 PRGQWEAAASLAMNFGEQLRHIVLPQAARIAIGPTVGFLIQIIKGTALASVIGFVEITKA 172 Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 G I N T + + +Y +L ++++ L K++ + Sbjct: 173 GQMIANATYEPFLVYGCVGLMYFALCFPLSVWSRNLERKLSPRR 216 >gi|320177113|gb|EFW52129.1| Glutamate Aspartate transport system permease protein GltK [Shigella dysenteriae CDC 74-1112] Length = 367 Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 33/76 (43%), Positives = 52/76 (68%) Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335 + +A++AE+VR GL A+P+GQ EAA +L L + K LV+LPQ ++ +IP L + + L Sbjct: 241 FQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQGLVILPQVLKLVIPGLVNTIIALF 300 Query: 336 KNSSLAVAVGFADLVS 351 K++SL + +G DL S Sbjct: 301 KDTSLVIIIGLFDLFS 316 >gi|167745442|ref|ZP_02417569.1| hypothetical protein ANACAC_00133 [Anaerostipes caccae DSM 14662] gi|317473006|ref|ZP_07932308.1| inner membrane transporter [Anaerostipes sp. 3_2_56FAA] gi|167655163|gb|EDR99292.1| hypothetical protein ANACAC_00133 [Anaerostipes caccae DSM 14662] gi|316899515|gb|EFV21527.1| inner membrane transporter [Anaerostipes sp. 3_2_56FAA] Length = 223 Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 37/116 (31%), Positives = 72/116 (62%), Gaps = 1/116 (0%) Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326 M+ +A S AA+ AEI RSG+ A+P GQ EAA LG + ++LPQ ++ I+PP Sbjct: 95 MAAVVAFSLNYAAYFAEIYRSGIQAIPNGQYEAAKVLGFGKAQTFFKIILPQVVKIILPP 154 Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382 + S+ + L+K++SLA +G ++ V ++++ + +E +++ YL ++++++ Sbjct: 155 MGSECMTLVKDTSLAHVIGVMEIYVVAANNMSRS-RGMEYLIVAGIFYLIMNMIVS 209 >gi|221067527|ref|ZP_03543632.1| polar amino acid ABC transporter, inner membrane subunit [Comamonas testosteroni KF-1] gi|220712550|gb|EED67918.1| polar amino acid ABC transporter, inner membrane subunit [Comamonas testosteroni KF-1] Length = 266 Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 42/123 (34%), Positives = 72/123 (58%), Gaps = 2/123 (1%) Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326 ++L I LS TAA +AE+ R+G++AVPRGQ +AA +LGLT + ++ PQA+R IIP Sbjct: 142 LTLPIGLS--TAAVVAEVYRAGVLAVPRGQTDAARSLGLTEAQVFFFIVFPQALRYIIPA 199 Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386 L +Q + ++K+++ V + +L+ +I + + LI +Y ++ I+ Sbjct: 200 LVAQLVIVVKDTTFGYVVTYGELMQSAKVLIANYHSLVPVYLIVAALYCLVNYGISKASQ 259 Query: 387 RLN 389 RL Sbjct: 260 RLG 262 >gi|86358032|ref|YP_469924.1| amino acid ABC transporter permease [Rhizobium etli CFN 42] gi|86282134|gb|ABC91197.1| probable amino acid ABC transporter, permease protein [Rhizobium etli CFN 42] Length = 268 Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 54/189 (28%), Positives = 96/189 (50%), Gaps = 12/189 (6%) Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV-LI 238 L + + + + +G+V+ F L + EK+ + +Y + F GLP L+ L Sbjct: 50 ALGLQVTVSVAIVTLPIGLVIG-FLVALGQQSEEKSLRLAAGIYTTIFR--GLPELLTLF 106 Query: 239 ALKYQLH-FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQM 297 + Y + + +L ++G F++ IALS +A+ +E++ S A+P+GQ Sbjct: 107 IIYYGMQMLIQSLLELAGYVGPPVEINAFLAGVIALSVVFSAYCSEVLLSAFRAIPKGQY 166 Query: 298 EAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII 357 EA +LGL + RLV+LPQ +R +P LT+ ++ LLK++S + AD I+ Sbjct: 167 EAGDSLGLHRGRTLRLVILPQLVRIALPGLTNLWMVLLKDTSYVSIISLAD-------IL 219 Query: 358 NQTGQAIEI 366 QT A+ + Sbjct: 220 RQTSVAVRV 228 >gi|49081976|gb|AAT50388.1| PA0890 [synthetic construct] Length = 233 Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 51/167 (30%), Positives = 86/167 (51%), Gaps = 11/167 (6%) Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF----MSLYIALSCYTA 278 ++ T++I G P LV + L Y L QF+ + S + P +A + T+ Sbjct: 56 WLYTYVIRGTPMLVQLFLIYY------GLAQFDAVRESALWPWLSNASFCACLAFAINTS 109 Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338 A+ AEI+ L A P G++EAA A+G++ K R +LLP A+R +P +++ + +L+ + Sbjct: 110 AYTAEILAGSLKATPLGEIEAAKAMGMSRLKMYRRILLPSALRRALPQYSNEVIMMLQTT 169 Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS-IMIALF 384 SLA V D+ T+ +Q E + YL L+ I++ LF Sbjct: 170 SLASIVTLVDITGAARTVYSQYYLPFEAFITAGLFYLCLTFILVRLF 216 >gi|77414369|ref|ZP_00790524.1| amino acid ABC transporter, permease protein [Streptococcus agalactiae 515] gi|77159559|gb|EAO70715.1| amino acid ABC transporter, permease protein [Streptococcus agalactiae 515] Length = 174 Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 60/182 (32%), Positives = 95/182 (52%), Gaps = 19/182 (10%) Query: 212 HEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG-QFNFIGGSTVSPEFMSLY 270 H + + L ++IS L+ G+P +VL+ L Y F P +G Q + + S V MS Sbjct: 5 HLRLLRYLANIHIS--LMRGIPLMVLLFLIY---FGLPFIGIQLDAVTASIVGFTMMS-- 57 Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +A+I+EI+R+ L+AV GQ EAA ALGL R +++PQA R +P L++ Sbjct: 58 -------SAYISEIIRAALLAVDHGQWEAARALGLKTPTIYRGIIIPQATRIALPSLSNV 110 Query: 331 YLNLLKNSSLAVAVGFADLVS----VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386 L+++K SSL + D+ + VGGT + I + LI+ I +I+ + Sbjct: 111 LLDMVKGSSLTAMITVPDIFNNAKIVGGTYSDYMTAYILVALIYWVICTLYAIIQDWWEK 170 Query: 387 RL 388 RL Sbjct: 171 RL 172 >gi|309388402|gb|ADO76282.1| amino acid ABC transporter membrane protein, PAAT family [Halanaerobium praevalens DSM 2228] Length = 220 Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 38/137 (27%), Positives = 77/137 (56%), Gaps = 21/137 (15%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 + PL+ FL FGLP ++ P FN + G T++ I LS Sbjct: 62 RGTPLITQLFFLYFGLPQII------------PF---FNRVNGFTIA------IIGLSLN 100 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 + A+++E +R + ++ +GQMEA++++G+++ +A R +++PQA R IP L + ++N++K Sbjct: 101 SGAYMSEAIRGAISSIDKGQMEASLSVGMSYFQAMRRIIMPQAARVAIPTLFNSFINIIK 160 Query: 337 NSSLAVAVGFADLVSVG 353 ++L +G ++++ Sbjct: 161 GTALTFTIGVTEVMATA 177 >gi|251791414|ref|YP_003006135.1| polar amino acid ABC transporter inner membrane subunit [Dickeya zeae Ech1591] gi|247540035|gb|ACT08656.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya zeae Ech1591] Length = 221 Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 53/199 (26%), Positives = 100/199 (50%), Gaps = 14/199 (7%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 + SF LG++L + L R + K K + Y+ ++I G P LV + L + Sbjct: 28 ILSFALGLMLGVLVALL-RLYGPKPLKKICDFYV--WVIRGTPLLVQLFLIF-------- 76 Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 + F + I S A+ +EIVR +++VP+GQ AA +LG++ +A Sbjct: 77 ---YGLPNAGITLDAFPAALIGFSLNVGAYSSEIVRGAILSVPKGQWNAAYSLGMSGAQA 133 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370 R V++PQ++ +PPL + +++L+K++SLA + ++ I++ T + + + + Sbjct: 134 IRWVIVPQSVFVSLPPLANTFISLVKDTSLAAVITVPEMFLAAQRIVSVTYEPLFLYIEA 193 Query: 371 MFIYLSLSIMIALFMNRLN 389 IYL S +++ RL Sbjct: 194 ALIYLMFSTVLSKLQARLE 212 >gi|296876762|ref|ZP_06900810.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus parasanguinis ATCC 15912] gi|296432264|gb|EFH18063.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus parasanguinis ATCC 15912] Length = 213 Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 55/185 (29%), Positives = 94/185 (50%), Gaps = 24/185 (12%) Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239 +LT+ A + + S LGIV++ S+ H LL I +++ G P L+ Sbjct: 16 SLTLQVFAFVLILSIPLGIVVAFLLQLRSKILHG-------LLTIYIWVMRGTPLLL--- 65 Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT---AAFIAEIVRSGLIAVPRGQ 296 QL F VL ++ L A+ +T AA+ AEI R G++A+P GQ Sbjct: 66 ---QLIFIYYVL--------PSIGIRIDRLPAAIMAFTLNYAAYFAEIFRGGIVAIPTGQ 114 Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356 EAA L L+ + R ++LPQ ++ ++P + ++ ++L+K++SL A+G +DL+ T Sbjct: 115 YEAAKVLKLSSWQTIRYIILPQVVKIVLPSVFNEVMSLIKDTSLVYALGISDLILASRTA 174 Query: 357 INQTG 361 N+ Sbjct: 175 ANRDA 179 >gi|320007606|gb|ADW02456.1| polar amino acid ABC transporter, inner membrane subunit [Streptomyces flavogriseus ATCC 33331] Length = 291 Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 64/228 (28%), Positives = 108/228 (47%), Gaps = 46/228 (20%) Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI---FGLPTLVLI 238 T+ A V S LG VL++ RLS H P+ ++ST L+ +P LV+I Sbjct: 75 TLKAFAYAAVLSLALGAVLAV--GRLSVH--------KPVRWVSTVLVEFFRAMPVLVMI 124 Query: 239 -----ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293 ALK Q +L L+ Y + +AE+ R+G+ +V Sbjct: 125 FFIFVALKVQ---------------------PLPALVAGLTLYNGSVLAEVFRTGINSVE 163 Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353 RGQ EAA ALG+ + T VL PQA+R+++P + SQ + LK++SL + + + + G Sbjct: 164 RGQGEAAYALGMRKTQVTTHVLAPQAVRAMLPTIISQLVVALKDTSLGYLITYEEFLHAG 223 Query: 354 GTIINQTGQAIEIILIWMF---IYLSLSIMIALFMNRLNAKIALKEKK 398 I + + I + M IY+ + ++++ F +A +E++ Sbjct: 224 KLIASNLDYDLPFIPVVMVISPIYIGMCMLLSWFAT----WVARRERR 267 Score = 45.8 bits (107), Expect = 0.012, Method: Compositional matrix adjust. Identities = 23/50 (46%), Positives = 34/50 (68%), Gaps = 1/50 (2%) Query: 110 IGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIP 159 +G ++ GRLS +K V W+ V VE FR +P LV+IFF++ + L V P+P Sbjct: 89 LGAVLAVGRLSVHKPVRWVSTVLVEFFRAMPVLVMIFFIFVA-LKVQPLP 137 >gi|226313305|ref|YP_002773199.1| arginine ABC transporter permease protein [Brevibacillus brevis NBRC 100599] gi|226096253|dbj|BAH44695.1| arginine ABC transporter permease protein [Brevibacillus brevis NBRC 100599] Length = 219 Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 38/117 (32%), Positives = 68/117 (58%), Gaps = 11/117 (9%) Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 ++F P L +N + + + + + A+I+E +R G++AV +GQ EAA AL Sbjct: 74 VYFATPQLTGYNI-------SQLEAAVLTFTLNSGAYISETIRGGILAVDKGQWEAAKAL 126 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS----VGGTI 356 G+ + + ++LPQA+++I+P L ++ + LLK S+L +G AD++ V GTI Sbjct: 127 GVPYHRMMLDIILPQAVKNILPALVNETIALLKESALVSTIGLADIMQNANVVKGTI 183 >gi|224499026|ref|ZP_03667375.1| hypothetical protein LmonF1_04713 [Listeria monocytogenes Finland 1988] Length = 235 Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 64/208 (30%), Positives = 103/208 (49%), Gaps = 15/208 (7%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 +F F++ I L+L R +H + + + Y+S F P ++ I L Y P+ Sbjct: 31 LFGFIIAIGLTLI-----RMYHVRFLEPIAKFYVSFFR--STPAILHIMLIY---LGIPL 80 Query: 251 LGQF---NFIGGSTVS--PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305 L F +F G + + P + + IALS A++ EI+RSG+IAV GQMEAA ++G Sbjct: 81 LVDFLSKSFGLGISANKIPVVVFVIIALSFTAGAYLTEILRSGIIAVDIGQMEAAYSVGY 140 Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365 TH ++ R VLLPQA +P T+ + L +S+A V ++ + + + +E Sbjct: 141 THGQSIRKVLLPQAFMIALPNFTNLCIGFLHTTSIAAIVAVPEITGMATIVASDNYAFLE 200 Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIA 393 + IY L+I+I L IA Sbjct: 201 AFIGAALIYWFLTILIEAINYILEKNIA 228 >gi|163844812|ref|YP_001622467.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Brucella suis ATCC 23445] gi|163675535|gb|ABY39645.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Brucella suis ATCC 23445] Length = 226 Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 33/95 (34%), Positives = 61/95 (64%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + I + A+ +EI+R+ + +VP+GQ EAA ++G++ R+A +LPQA R+ +P Sbjct: 89 FPAALIGFTLNIGAYSSEIIRAVISSVPKGQWEAAYSIGMSWRQALIRTILPQATRTAVP 148 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 PL++ +++L+K++SLA A+ +L I+ T Sbjct: 149 PLSNTFISLIKDTSLAAAITVPELFQSAQRIVATT 183 >gi|121608673|ref|YP_996480.1| glutamine ABC transporter permease [Verminephrobacter eiseniae EF01-2] gi|121553313|gb|ABM57462.1| polar amino acid ABC transporter, inner membrane subunit [Verminephrobacter eiseniae EF01-2] Length = 228 Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 41/116 (35%), Positives = 66/116 (56%) Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 + A+IAEIVR ++VPRG EA +A+GL H + V+ P A R + P L +Q++ LK Sbjct: 110 SGAYIAEIVRGAFLSVPRGLAEAGLAMGLPHWRVLAFVVGPVAFRRMTPALGNQFIVSLK 169 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 ++SL + +G +L G I+ +A+EI IYL L ++ L + L ++ Sbjct: 170 DTSLFIVIGVGELTRQGQEIMATNFRAVEIWTAVAVIYLLLIGVLTLGLRVLEKRM 225 >gi|145221824|ref|YP_001132502.1| polar amino acid ABC transporter, inner membrane subunit [Mycobacterium gilvum PYR-GCK] gi|145214310|gb|ABP43714.1| amino acid ABC transporter substrate-binding protein, PAAT family / amino acid ABC transporter membrane protein, PAAT family [Mycobacterium gilvum PYR-GCK] Length = 503 Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 65/208 (31%), Positives = 103/208 (49%), Gaps = 20/208 (9%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 + SFV+G+V++L L+R L YIS +I G P LV + + + F P Sbjct: 310 IISFVIGLVIAL-GVALARLSSNVVLSNLARFYIS--VIRGTPLLVQL---FIVFFALPE 363 Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 G + P F + IA S + AEI+RS + ++P+GQ EAA +GL + Sbjct: 364 FG-------VKIDP-FPAAVIAFSLNVGGYAAEIIRSAIQSIPKGQWEAAETIGLNYVGT 415 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ-----AIE 365 R ++LPQA R +PPL++ ++L+K++SLA + +L+ I T + Sbjct: 416 LRRIILPQATRVAVPPLSNTLISLVKDTSLASTILVTELLRQAQIIAAPTFEFFALYGTA 475 Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIA 393 + W+ I L LS A F +RL +A Sbjct: 476 AVYYWV-ICLVLSFGQARFEHRLERYVA 502 >gi|260460788|ref|ZP_05809038.1| polar amino acid ABC transporter, inner membrane subunit [Mesorhizobium opportunistum WSM2075] gi|259033365|gb|EEW34626.1| polar amino acid ABC transporter, inner membrane subunit [Mesorhizobium opportunistum WSM2075] Length = 219 Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 60/237 (25%), Positives = 108/237 (45%), Gaps = 22/237 (9%) Query: 160 DHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKAL 219 D +IV P+ L LT+ A FVF + I + L+A + A Sbjct: 5 DFTIVAPYWDLLVTGAWWTAVLTISAGALSFVFGILFAITV-LYAPAI---------LAY 54 Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279 P+ + +L G P L+ + L Y F + P + + L + A Sbjct: 55 PVRAL-MWLFMGTPLLLQLFLIY-----------FGLVQVGIDIPALAAGIVGLGLHFAV 102 Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339 + A+++R+G++AV GQ E A ++G + R V++PQA+R+ PP+ S + LLK SS Sbjct: 103 YNADVIRAGVVAVDIGQTEGARSIGFGKWQTLRYVVIPQAIRNTAPPIGSNLIALLKESS 162 Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 + +G A+LV I++T + E + +Y L++++ ++R + + Sbjct: 163 VVSVIGIAELVHSAQLAISETFRPFEFYITAAALYYILNLVLEAALHRFERHVEVSR 219 >gi|312959433|ref|ZP_07773950.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Pseudomonas fluorescens WH6] gi|311286150|gb|EFQ64714.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Pseudomonas fluorescens WH6] Length = 242 Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 55/187 (29%), Positives = 89/187 (47%), Gaps = 6/187 (3%) Query: 217 KALPLLYIS----TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE-FMSLYI 271 +LP L I T LI G+P LVL+ L + + G +F+ + + F + I Sbjct: 54 SSLPFLRIPAQLYTTLIRGVPDLVLMLLIFY-SLQTWLTGLTDFMEWEYIEIDPFSAGVI 112 Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 L A+ E R ++AVPRGQ+EAA A GL + R V PQ MR +P + + + Sbjct: 113 TLGFIYGAYFTETFRGAILAVPRGQLEAATAYGLKRGQRFRYVTFPQMMRFALPGIGNNW 172 Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 + +LK ++L +G ADLV T Q +++ IYL ++ + RL + Sbjct: 173 MVMLKATALVSIIGLADLVKAAQDAGKSTYQLFYFLVLAALIYLLITSASNFVLRRLERR 232 Query: 392 IALKEKK 398 + ++ Sbjct: 233 YSAGARE 239 >gi|300767622|ref|ZP_07077532.1| glutamine ABC superfamily ATP binding cassette transporter, substrate binding and permease protein [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|300494607|gb|EFK29765.1| glutamine ABC superfamily ATP binding cassette transporter, substrate binding and permease protein [Lactobacillus plantarum subsp. plantarum ATCC 14917] Length = 496 Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 43/150 (28%), Positives = 71/150 (47%), Gaps = 21/150 (14%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 + +PL+ ++ F+ G P L+ K P F++ I L Sbjct: 341 RGMPLMVLAFFIYIGFPDLIGHGFKI---------------------PAFVAGMITLMLN 379 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 A+ V+ G AV GQMEAA +LGL + A R V++PQ +R +IP +Q++ LK Sbjct: 380 EGAYTGAFVKGGFAAVDDGQMEAARSLGLPYWTAMRKVIMPQGIRIMIPSFINQFIITLK 439 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 ++S+ +G +L G II + + +I Sbjct: 440 DTSILSVIGIVELTQTGTLIIARNFEGFKI 469 >gi|70730912|ref|YP_260653.1| amino acid ABC transporter permease [Pseudomonas fluorescens Pf-5] gi|68345211|gb|AAY92817.1| amino acid ABC transporter, permease protein [Pseudomonas fluorescens Pf-5] Length = 213 Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 47/137 (34%), Positives = 76/137 (55%), Gaps = 3/137 (2%) Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320 +SP F + + L TAA ++E+ R A+P+GQ EAA L L+ + V+LPQ + Sbjct: 77 ALSP-FAAAVLGLGLITAAHMSEVYRGAFAAIPQGQYEAAQVLNLSAPQRFFDVMLPQLV 135 Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380 R IP + + LLK+S++A +G D+ + QT Q +E+ + +YL LS+ Sbjct: 136 RIAIPTSATYAIGLLKDSAVASTIGVGDVSFQAYQMSQQTFQGLEVYSVAALVYLILSVP 195 Query: 381 IALFMNRLNAKIALKEK 397 +ALF L+A LK++ Sbjct: 196 VALFSRWLSAT--LKQR 210 >gi|27382024|ref|NP_773553.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] gi|27355194|dbj|BAC52178.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] Length = 213 Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 40/132 (30%), Positives = 77/132 (58%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 ++S+ I + ++ AF+ EI R + AVP+GQ+EAA AL L + + V+LPQA+R +P Sbjct: 82 WVSVSIGFTLHSGAFLGEIWRGAIEAVPKGQVEAAKALSLNYGSQMQDVVLPQAIRISLP 141 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 + L+K +SLA +GF +L+ G + NQ + + ++ + +Y ++ ++L Sbjct: 142 ATIGFLVQLIKGTSLAAIIGFTELMRAGTIVSNQNFKPLLVLGLVCVLYFAICWPLSLVG 201 Query: 386 NRLNAKIALKEK 397 +L ++A+ + Sbjct: 202 AQLERRMAVAAR 213 >gi|332042180|gb|EGI78506.1| polar amino acid ABC transporter, inner membrane subunit [Hylemonella gracilis ATCC 19624] Length = 224 Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 44/134 (32%), Positives = 72/134 (53%), Gaps = 24/134 (17%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 +A P L + F+ FGLP F+G P+ ++ + Sbjct: 70 RAFPPLVLLVFVYFGLP----------------------FLGWEI--PKLGAVLLGFLLN 105 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 AA+ AE+ R+GL AVP GQMEAA + GLT +A R V++PQA+++++P L S + ++K Sbjct: 106 NAAYYAEVFRAGLEAVPSGQMEAARSTGLTRMQALRHVVVPQAVKNVLPDLVSNSIEVVK 165 Query: 337 NSSLAVAVGFADLV 350 +++A VG +L+ Sbjct: 166 LTTIASVVGLPELL 179 >gi|227542731|ref|ZP_03972780.1| glutamate transporter permease protein GluD [Corynebacterium glucuronolyticum ATCC 51866] gi|227181497|gb|EEI62469.1| glutamate transporter permease protein GluD [Corynebacterium glucuronolyticum ATCC 51866] Length = 312 Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 34/88 (38%), Positives = 58/88 (65%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + L+ Y + IAE +R+G++++P GQ EAA ALGL+HR+ +LLPQA+ +++P Sbjct: 142 FAGVVFGLTMYNGSVIAETLRAGILSLPTGQSEAAEALGLSHRQTIWNILLPQAVATMLP 201 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVG 353 L SQ + LK+++L + + ++V G Sbjct: 202 ALISQLVIALKDTALGYMILYVEVVRSG 229 Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 30/72 (41%), Positives = 42/72 (58%) Query: 78 PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137 P+ +++ T IL G T A ++ A IIG L+G GRLS NK + W C + VE FR Sbjct: 55 PFLKSTTWTTYILPGLWGTLKAALVSIVFAIIIGALLGVGRLSKNKAIRWFCGIIVEFFR 114 Query: 138 NIPPLVVIFFLY 149 IP L+++ F Y Sbjct: 115 AIPVLILMIFAY 126 >gi|154246018|ref|YP_001416976.1| polar amino acid ABC transporter, inner membrane subunit [Xanthobacter autotrophicus Py2] gi|154160103|gb|ABS67319.1| polar amino acid ABC transporter, inner membrane subunit [Xanthobacter autotrophicus Py2] Length = 219 Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 48/156 (30%), Positives = 84/156 (53%), Gaps = 13/156 (8%) Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281 LYI F G P L+ + L + F P+LG VSP + + +++L+ +++AF+ Sbjct: 55 LYIELFQ--GTPLLMQLFLIF---FGLPLLGL-------DVSP-WAAAFVSLTLWSSAFL 101 Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341 AEI R + ++P+GQ EA+ +L ++ + R V+LPQ+MR +PP + ++K ++L Sbjct: 102 AEIWRGCVESIPKGQWEASSSLAMSFVEQLRYVILPQSMRIAVPPTVGFSVQVVKGTALT 161 Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377 +GF +L I N T + + IY +L Sbjct: 162 SIIGFVELSKAATIITNATFEPFTVYGFAALIYFAL 197 >gi|283954478|ref|ZP_06371998.1| putative polar amino acid transport system permease protein [Campylobacter jejuni subsp. jejuni 414] gi|283794095|gb|EFC32844.1| putative polar amino acid transport system permease protein [Campylobacter jejuni subsp. jejuni 414] Length = 219 Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 63/225 (28%), Positives = 104/225 (46%), Gaps = 23/225 (10%) Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230 N + + F + KI + + ++ IV F +++++ +K K L YI F Sbjct: 5 FNAQNIEFLMQGLFLTLKIALATCIISIVFGTFLA-ITKNYGDKLSKFLAACYIDIFRNT 63 Query: 231 GLPTLVLIALKYQLHFDKPVL-GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289 L +L A F PV GQF P+ I S YT++ +AEI+R GL Sbjct: 64 PLLLWMLAAC-----FVLPVFFGQF---------PQAFWGTIGFSLYTSSVMAEIIRGGL 109 Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349 ++P+GQ EAA + G ++LPQ R IIP L SQ + +K+++ +G A+L Sbjct: 110 NSIPKGQFEAAYSQGFGKFFTLFYIILPQTFRKIIPALLSQIVTTVKDTAYLAGLGIAEL 169 Query: 350 VSVGGTIINQTGQAIEIIL-------IWMFIYLSLSIMIALFMNR 387 TI+ + EI+ I+ I SLS+++ + + Sbjct: 170 TYNSKTILAKLTSFEEILAMIGVVAGIYFIICFSLSMLVRYYAKK 214 >gi|253690234|ref|YP_003019424.1| polar amino acid ABC transporter, inner membrane subunit [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251756812|gb|ACT14888.1| polar amino acid ABC transporter, inner membrane subunit [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 244 Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 49/163 (30%), Positives = 93/163 (57%), Gaps = 14/163 (8%) Query: 226 TFLIF--GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV-----SPEFMSLYIALSCYTA 278 T+++F G P LV + L Y LGQF +I S + P + +L ++LS T Sbjct: 55 TYVLFFRGTPLLVQLFLIYY------GLGQFQWIRESILWPFLREPHWCAL-LSLSLCTG 107 Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338 A+ EI+R GL +VP GQ+E+A A G+ + ++ P A+R +P ++ ++++K++ Sbjct: 108 AYACEIIRGGLQSVPVGQIESARACGMPSFMIFKRIVFPLAIRQALPAYGNELISMVKST 167 Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 SLA + ++ + +I +T +A+E+ L+ IYL +++++ Sbjct: 168 SLASIITLMEITGIAARLIAETYRALEVFLVAGAIYLFINLIL 210 >gi|153837587|ref|ZP_01990254.1| membrane protein [Vibrio parahaemolyticus AQ3810] gi|149749084|gb|EDM59895.1| membrane protein [Vibrio parahaemolyticus AQ3810] Length = 229 Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 40/89 (44%), Positives = 60/89 (67%), Gaps = 1/89 (1%) Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321 VSP F+S +ALS A++ ++ +R L AV RGQ EAA ALG++ A ++LPQA+R Sbjct: 87 VSP-FLSGVVALSLIFASYASQTLRGALKAVGRGQREAASALGISQFHAFVRIVLPQAVR 145 Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 +P LT+Q+L LLK+++L +G DL+ Sbjct: 146 HALPGLTNQWLVLLKDTALVSLIGVTDLL 174 >gi|139439417|ref|ZP_01772858.1| Hypothetical protein COLAER_01878 [Collinsella aerofaciens ATCC 25986] gi|133775196|gb|EBA39016.1| Hypothetical protein COLAER_01878 [Collinsella aerofaciens ATCC 25986] Length = 212 Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 34/104 (32%), Positives = 61/104 (58%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IA + +T+A +AEIVR GL ++PRGQ EAA + G R ++LPQ ++IIP L SQ Sbjct: 85 IAFTLFTSAVMAEIVRGGLNSIPRGQFEAAQSQGFGFFATMRYIILPQTFKTIIPALFSQ 144 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374 ++K+SS + A+L+ ++ ++++++ ++ Sbjct: 145 CTTVIKDSSYLSGINVAELMYTANVVMAHAIDLSQVLMLYGLVF 188 >gi|332040230|gb|EGI76610.1| amino acid ABC transporter permease [Hylemonella gracilis ATCC 19624] Length = 228 Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 39/115 (33%), Positives = 69/115 (60%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P F + + L + +A++AEI+R GL++V RGQ EAA+A GL+ + V+ PQA+R + Sbjct: 90 PGFWAGALGLGLHGSAYVAEILRGGLLSVHRGQREAALAAGLSPLQVFVCVVWPQALRVM 149 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378 + PL + Y+ LLK+SSL + +L+ I +++ + I L+ Y +++ Sbjct: 150 LAPLLNTYVTLLKDSSLCALIATEELMLAARAIASESFLPLHIFLLVGVFYFAIA 204 >gi|170721102|ref|YP_001748790.1| polar amino acid ABC transporter inner membrane subunit [Pseudomonas putida W619] gi|169759105|gb|ACA72421.1| polar amino acid ABC transporter, inner membrane subunit [Pseudomonas putida W619] Length = 215 Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 34/95 (35%), Positives = 59/95 (62%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 +M+ IAL+ +T+AF+AEI R + ++P GQ EA+ +L L+ + R V+LPQA+R + Sbjct: 85 WMAAAIALTLFTSAFLAEIWRGCVESIPNGQWEASGSLALSRMEQLRHVILPQALRIAVA 144 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 P + ++K +++ +GF +L GG + N T Sbjct: 145 PTVGFSVQVVKGTAVTSIIGFTELTKTGGMLANAT 179 >gi|89897436|ref|YP_520923.1| hypothetical protein DSY4690 [Desulfitobacterium hafniense Y51] gi|89336884|dbj|BAE86479.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 236 Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 54/177 (30%), Positives = 87/177 (49%), Gaps = 24/177 (13%) Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279 PLL FL FGLP L G T+S E + LS + Sbjct: 81 PLLIQVYFLYFGLPKL-----------------------GVTLS-ETACAILGLSFLGGS 116 Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339 ++AE +R G+ AV + Q+E+ ++LGL+ + R V+ PQA IP L + + LLK +S Sbjct: 117 YMAEALRGGMEAVSKSQLESGLSLGLSRWQLIRYVVFPQAFSFSIPALGANCIFLLKETS 176 Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 + A+ DL++V +I Q +E +L+ + YL + + ++LF+ L K+ E Sbjct: 177 VLGAIAILDLMNVTKDLIGMYYQTVESLLMLVVSYLIILLPLSLFLTWLERKVRYAE 233 >gi|157826658|ref|YP_001495722.1| amino acid ABC transporter permease [Rickettsia bellii OSU 85-389] gi|157801962|gb|ABV78685.1| Amino acid ABC transporter permease protein [Rickettsia bellii OSU 85-389] Length = 218 Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 49/167 (29%), Positives = 86/167 (51%), Gaps = 29/167 (17%) Query: 191 VFSFVLGIVLSLF------ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244 +F V+G++L+L A RL F+ + PLL + + F P L I +K+ + Sbjct: 31 IFGLVIGVLLALCKVNKNRALRLFADFYTSIFRGTPLLIQLSIIYFASPYL--IGIKFTV 88 Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304 FM+ I+ S + A+++E++R+G+ AV +GQ EAA AL Sbjct: 89 ---------------------FMAGAISFSLNSGAYVSEVIRAGINAVDKGQFEAAEALA 127 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 + + ++LPQA+++I P LT++ +NL+K S++ G DL+ Sbjct: 128 IPKFLIMKDIILPQAIKNIFPSLTNELINLIKESAIISMFGEMDLMK 174 >gi|26990305|ref|NP_745730.1| polar amino acid ABC transporter inner membrane subunit [Pseudomonas putida KT2440] gi|148547399|ref|YP_001267501.1| polar amino acid ABC transporter inner membrane subunit [Pseudomonas putida F1] gi|24985259|gb|AAN69194.1|AE016554_1 amino acid ABC transporter, permease protein [Pseudomonas putida KT2440] gi|148511457|gb|ABQ78317.1| polar amino acid ABC transporter, inner membrane subunit [Pseudomonas putida F1] gi|313498469|gb|ADR59835.1| Polar amino acid ABC transporter inner membrane subunit [Pseudomonas putida BIRD-1] Length = 239 Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 61/184 (33%), Positives = 95/184 (51%), Gaps = 23/184 (12%) Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTF--LIFGLP---TLVLIALKYQLHFDKPV 250 LG+V++L A ++ K LP + +TF + GLP TL++I Q+ K + Sbjct: 40 LGLVVALAA---------RSRKRLPRAWATTFSTVFRGLPELLTLLIIYYGCQIAAQK-I 89 Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 L + G ++ F++ IA S AAF +EI + +P+GQ+EA ALGL+ R Sbjct: 90 LAAMGYQGEFLIN-TFLAAMIAFSLVFAAFSSEIWLAAFKTLPKGQLEACSALGLSKRTG 148 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370 VLLPQ R +P L++ +L+LLK++SL + DL + QT A+ + Sbjct: 149 FFKVLLPQLTRIALPGLSNNWLSLLKDTSLVSTISLVDL-------MRQTNLAVSVTKEP 201 Query: 371 MFIY 374 MF Y Sbjct: 202 MFFY 205 >gi|318077286|ref|ZP_07984618.1| glutamate transporter permease [Streptomyces sp. SA3_actF] Length = 269 Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 45/163 (27%), Positives = 92/163 (56%), Gaps = 16/163 (9%) Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249 V + LG V + RLS H + A + + + +P L+++ + Y ++ Sbjct: 48 MVIALPLGAVFGI--ARLSDHVWVRVPSATVVEFFRS-----IPVLIMMIVAYAVY---- 96 Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309 Q+ + ST ++ L Y A+ +AEIVR+G++++P+GQ EAA A+GL + Sbjct: 97 --AQYTSV--STDDRPLYAVVTGLVLYNASVLAEIVRAGILSLPKGQTEAAQAIGLRKGQ 152 Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV-GFADLVS 351 R +LLPQ++ +++P + SQ + ++K++++ ++ GF++L++ Sbjct: 153 TMRSILLPQSVTAMLPAIVSQLVVIVKDTAIGGSILGFSELIN 195 >gi|152969452|ref|YP_001334561.1| arginine transporter permease subunit ArtQ [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|206578434|ref|YP_002239487.1| arginine ABC transporter, permease protein ArtQ [Klebsiella pneumoniae 342] gi|238893923|ref|YP_002918657.1| arginine transporter permease subunit ArtQ [Klebsiella pneumoniae NTUH-K2044] gi|288936335|ref|YP_003440394.1| polar amino acid ABC transporter inner membrane subunit [Klebsiella variicola At-22] gi|290510609|ref|ZP_06549979.1| arginine transport system permease [Klebsiella sp. 1_1_55] gi|329998470|ref|ZP_08303107.1| arginine ABC transporter permease protein ArtQ [Klebsiella sp. MS 92-3] gi|150954301|gb|ABR76331.1| arginine 3rd transport system permease protein [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|206567492|gb|ACI09268.1| arginine ABC transporter, permease protein ArtQ [Klebsiella pneumoniae 342] gi|238546239|dbj|BAH62590.1| arginine 3rd transport system permease component [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] gi|288891044|gb|ADC59362.1| polar amino acid ABC transporter, inner membrane subunit [Klebsiella variicola At-22] gi|289777325|gb|EFD85323.1| arginine transport system permease [Klebsiella sp. 1_1_55] gi|328538660|gb|EGF64756.1| arginine ABC transporter permease protein ArtQ [Klebsiella sp. MS 92-3] Length = 238 Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 68/223 (30%), Positives = 112/223 (50%), Gaps = 20/223 (8%) Query: 191 VFSFVLGIVLS-LFATRLSRHFHE----KTG-----KALPLLYISTFLIFGLPTLVLI-- 238 V + V+G+VL+ LFA S + TG + LP + + F+ FG L+L Sbjct: 19 VCALVIGLVLAMLFAVLESVKWRPVAWLATGIVTILRGLPEILVVLFIYFGSSQLLLTLS 78 Query: 239 -ALKYQLHFDK-PVLGQF-NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295 L F + PV Q NF VSP F+ IALS AA+ ++ +R L AVP+G Sbjct: 79 DGFTIPLGFTQIPVQMQIENF----DVSP-FLCGAIALSLLYAAYASQTLRGALKAVPQG 133 Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355 Q E+ ALGL+ +++PQ R +P L +Q+L LLK+++L + DL+ + Sbjct: 134 QWESGQALGLSKAAIFFRLVMPQMWRHALPGLGNQWLVLLKDTALVSLISVNDLMLQTKS 193 Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 I +T + +I IYL ++++ + R++ + E++ Sbjct: 194 IATRTQEPFNWYIIAAAIYLVITLLSQYILKRIDQRATRFERR 236 >gi|121608891|ref|YP_996698.1| polar amino acid ABC transporter inner membrane subunit [Verminephrobacter eiseniae EF01-2] gi|121553531|gb|ABM57680.1| polar amino acid ABC transporter, inner membrane subunit [Verminephrobacter eiseniae EF01-2] Length = 243 Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 52/172 (30%), Positives = 86/172 (50%), Gaps = 10/172 (5%) Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY----IALSCYT 277 +++ T L G P LV + + L++ L Q+ +I S P Y +A + T Sbjct: 65 VWLYTGLFRGTPLLVQL---FMLYYG---LAQWPWIRESWAWPYLREAYGCAILAFTLNT 118 Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 AA+IAEI+ + P G++EAA +LG+ H R ++LP A+R +P +++ + L+ Sbjct: 119 AAYIAEILAGQIRNTPHGEVEAARSLGMNHWLLLRRIVLPSALRRALPAYSNEVIMLMHA 178 Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 +S+A V ADL + I +T E LI YL L+ +A R+ Sbjct: 179 TSVASLVTLADLTGIARQIYAETYNPFEPFLIAGIFYLVLTNALAWIFRRME 230 >gi|330960458|gb|EGH60718.1| arginine/ornithine ABC transporter permease [Pseudomonas syringae pv. maculicola str. ES4326] Length = 232 Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 54/167 (32%), Positives = 86/167 (51%), Gaps = 11/167 (6%) Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL----YIALSCYTA 278 ++ T++I G P LV + L Y L QF+ + S + P S +A S T+ Sbjct: 56 WLYTYVIRGTPMLVQLFLIYY------GLAQFDAVRESFLWPWLSSATFCACLAFSINTS 109 Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338 A+ AEI+ L A P G++EAA A+G++ K R +LLP A+R +P +++ + +L+ + Sbjct: 110 AYTAEIIAGSLKATPAGEIEAARAMGMSKAKMYRRILLPSALRRALPQYSNEVIMMLQTT 169 Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS-IMIALF 384 SLA V D+ TI Q E + YL L+ I++ LF Sbjct: 170 SLASIVTLIDITGAARTINAQFYLPFEAYVTAGVFYLCLTFILVRLF 216 >gi|330942130|gb|EGH44787.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. pisi str. 1704B] Length = 219 Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 51/152 (33%), Positives = 80/152 (52%), Gaps = 8/152 (5%) Query: 232 LPTLVLIALKYQLHF--DKPVLG----QFNFIGGSTVS--PEFMSLYIALSCYTAAFIAE 283 +P L+++ + Y + D VLG Q F STV +F + LS +A+ AE Sbjct: 20 MPALLVLIILYNFAYLYDHIVLGVPFTQLVFAEWSTVDVLSQFTVAVLGLSLMQSAYTAE 79 Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343 I+R GLI V GQ EAA ALGL + ++LPQA+RSI+P ++ + L+K +S+ Sbjct: 80 IIRGGLIGVDAGQHEAAAALGLPVSRRIFRIILPQALRSILPSGFNEIIGLVKGTSIVYV 139 Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375 + +L I N+T I ++++ YL Sbjct: 140 LALPELFYTVQVIYNRTQAVIPLLIVATVWYL 171 >gi|303247502|ref|ZP_07333774.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio fructosovorans JJ] gi|302491198|gb|EFL51090.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio fructosovorans JJ] Length = 237 Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 45/133 (33%), Positives = 82/133 (61%), Gaps = 4/133 (3%) Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321 +S F+S + L +AA+ ++I R + ++P GQ++AA ALG++ A R ++LPQA+R Sbjct: 96 LSSGFLSAVLVLGLTSAAYQSQIFRGAIQSLPPGQLKAARALGMSDAVAIRAIILPQALR 155 Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI--WMFIYLSLSI 379 IP +++Y LLK+S+LA +G +++S ++ T Q + + L+ +F +L+ + Sbjct: 156 LAIPAWSNEYSILLKDSALAFTIGVLEVMSRTRSVAALTHQPLPLSLLAGALFFFLTWAG 215 Query: 380 MIALFMNRLNAKI 392 + AL RL AK+ Sbjct: 216 IKAL--KRLEAKV 226 >gi|307329671|ref|ZP_07608829.1| polar amino acid ABC transporter, inner membrane subunit [Streptomyces violaceusniger Tu 4113] gi|306884729|gb|EFN15757.1| polar amino acid ABC transporter, inner membrane subunit [Streptomyces violaceusniger Tu 4113] Length = 289 Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 61/219 (27%), Positives = 105/219 (47%), Gaps = 46/219 (21%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI---FGLPTLVLI-----ALKY 242 V S LG VL+ A RLS H P+ +++T L+ +P LV+I ALK Sbjct: 82 VLSLALGGVLA--AGRLSEH--------RPVRWVATLLVEFFRAMPVLVMIFFVFVALKV 131 Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302 Q +L L+ Y + +AE+ R+G+ +V RGQ EAA + Sbjct: 132 Q---------------------PLPALVTGLTLYNGSVLAEVFRAGVNSVDRGQREAAYS 170 Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362 LGL + VL+PQ +R+++P + SQ + LK++SL + + + + G I + Sbjct: 171 LGLRKTQVMTSVLVPQGVRAMLPAIISQLVVALKDTSLGFLITYEEFLHAGKLIASNLDY 230 Query: 363 AIEIILIWMF---IYLSLSIMIALFMNRLNAKIALKEKK 398 + I + M IY+ + ++++ F N +A +E++ Sbjct: 231 DLPFIPVVMVISPIYIGMCMLLSWFAN----WVAKRERR 265 Score = 45.1 bits (105), Expect = 0.022, Method: Compositional matrix adjust. Identities = 22/50 (44%), Positives = 35/50 (70%), Gaps = 1/50 (2%) Query: 110 IGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIP 159 +G ++ AGRLS ++ V W+ + VE FR +P LV+IFF++ + L V P+P Sbjct: 87 LGGVLAAGRLSEHRPVRWVATLLVEFFRAMPVLVMIFFVFVA-LKVQPLP 135 >gi|119945610|ref|YP_943290.1| ABC polar amino acid transporter inner membrane protein [Psychromonas ingrahamii 37] gi|119864214|gb|ABM03691.1| ABC polar amino acid transporter inner membrane protein [Psychromonas ingrahamii 37] Length = 223 Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 53/181 (29%), Positives = 99/181 (54%), Gaps = 25/181 (13%) Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY--ISTFLIF--G 231 L + ++TM+ F F+ +L ++L++ R F +PLL+ S F+ F G Sbjct: 18 LKYLSVTMEMALLGFCFAIILAVILAVV-----RVFK------IPLLHNLASVFISFFRG 66 Query: 232 LPTLV-LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290 P LV L L Y L P+ + F + I L+ + +A++AE +R+ ++ Sbjct: 67 TPLLVQLFLLYYGLPQVMPIFAGVD---------AFSAAIIGLTLHFSAYMAESIRAAIM 117 Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 V + QMEA +++G+T +A R ++LPQA R P L + +++++K++SLA +G A+++ Sbjct: 118 GVDKSQMEACLSIGMTRLQAMRRIILPQAARVATPSLMNYFIDMIKSTSLAFTLGVAEIM 177 Query: 351 S 351 + Sbjct: 178 A 178 >gi|296139503|ref|YP_003646746.1| polar amino acid ABC transporter inner membrane subunit [Tsukamurella paurometabola DSM 20162] gi|296027637|gb|ADG78407.1| polar amino acid ABC transporter, inner membrane subunit [Tsukamurella paurometabola DSM 20162] Length = 227 Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 35/78 (44%), Positives = 52/78 (66%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + LS YTAAF+ E +RSG+ VP GQ EAA ALGL ++LPQA+R+++ P+ S Sbjct: 101 LGLSFYTAAFVCETLRSGINTVPVGQAEAARALGLPFFTVFGTIVLPQAIRAVVAPMGSV 160 Query: 331 YLNLLKNSSLAVAVGFAD 348 + L KNS++A +G ++ Sbjct: 161 LIALTKNSTIASVIGVSE 178 >gi|227112140|ref|ZP_03825796.1| octopine transport system permease protein [Pectobacterium carotovorum subsp. brasiliensis PBR1692] gi|227326809|ref|ZP_03830833.1| octopine transport system permease protein [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 238 Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 54/187 (28%), Positives = 90/187 (48%), Gaps = 12/187 (6%) Query: 220 PLLYIS---TFLIFGLPTLVLIALKY-----QLHFDKPVLGQFNFIGGSTVSPEFMSLYI 271 P+ Y++ T LI G+P L++I L Y L + G F G P F++ I Sbjct: 56 PVRYLADGYTTLIRGVPDLLIIYLLYFGGSSALTLLAKLFGSNEFFG----FPGFLAGVI 111 Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 A+ + A E+ R AV +G++EAA A G+ R +++P +R IPPL + + Sbjct: 112 AVGISSGAQQTEVYRGAFYAVSKGEIEAAKACGMPTLLRLRRIIIPLLLRHAIPPLGNVW 171 Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 +LK S+L G A+L++ T TG+ + + +YL++SI M R + Sbjct: 172 QLVLKTSALVSVTGVAELLTQAQTGAGSTGKPFDFFMAAALLYLAISICSGWIMRRAESH 231 Query: 392 IALKEKK 398 + K+ Sbjct: 232 YSRGVKR 238 Score = 38.5 bits (88), Expect = 1.7, Method: Compositional matrix adjust. Identities = 18/69 (26%), Positives = 35/69 (50%) Query: 81 SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140 + + +L+G T LA G + +IGT+ ++ N+ V ++ Y + R +P Sbjct: 13 GEHGWGKLLLIGAGMTLALAIGGFLLGAVIGTIGAWSKICGNRPVRYLADGYTTLIRGVP 72 Query: 141 PLVVIFFLY 149 L++I+ LY Sbjct: 73 DLLIIYLLY 81 >gi|170691880|ref|ZP_02883044.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia graminis C4D1M] gi|170143164|gb|EDT11328.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia graminis C4D1M] Length = 225 Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 59/217 (27%), Positives = 107/217 (49%), Gaps = 13/217 (5%) Query: 170 FLNNRG--LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF 227 +++RG LS +T+ + G VL++F+ +R T Y+S F Sbjct: 9 LIDSRGVLLSGMQVTLQITVVAILVGLAWGTVLAIFSLSANRALRLFTQT-----YVSLF 63 Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287 +P LV++ L + L + + N STV +S A S AAF EI+R+ Sbjct: 64 R--SIP-LVMLLLWFYLIVPQLLKALLNL--PSTVDLRLVSALTAYSLLEAAFFCEIIRA 118 Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347 G+ +P GQ++A ALG+T + R V+LPQA R+++P +Q + + +++SL + Sbjct: 119 GIAGLPSGQLQAGYALGMTSMQTLRYVILPQAFRAMVPLALTQCIVIFQDTSLVYVIALG 178 Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSL-SIMIAL 383 D I + G + ++++ Y ++ ++MIA+ Sbjct: 179 DFFRRLTAIGERDGTIVPVLIVAGVAYWAITTLMIAI 215 >gi|257139193|ref|ZP_05587455.1| amino acid ABC transporter, permease protein [Burkholderia thailandensis E264] Length = 262 Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 55/171 (32%), Positives = 84/171 (49%), Gaps = 25/171 (14%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTG--KALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248 V LG+ L+L L G +A+P+L + + F LP L LH D Sbjct: 57 VLGVALGVALALATGALRGALIVVIGFFRAIPVLMLIFWTYFLLPVL--------LHADV 108 Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308 P L ++ ALS A++A V +G+ A GQ +A ++LGLT R Sbjct: 109 PGLA---------------AVVCALSLVGGAYLAHSVHAGIRAAGDGQRQAGLSLGLTRR 153 Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359 + R VLLPQA+R + P +Q+++L+K++SLA VG +L V + N+ Sbjct: 154 QTVRYVLLPQAVRIMTPSFVNQWVSLVKDTSLAYIVGVPELSFVATQVNNR 204 >gi|217963555|ref|YP_002349233.1| L-cystine transport system permease protein TcyM [Listeria monocytogenes HCC23] gi|217332825|gb|ACK38619.1| L-cystine transport system permease protein TcyM [Listeria monocytogenes HCC23] gi|307571869|emb|CAR85048.1| polar amino acid ABC transporter, permease protein [Listeria monocytogenes L99] Length = 236 Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 64/208 (30%), Positives = 103/208 (49%), Gaps = 15/208 (7%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 +F F++ I L+L R +H + + + Y+S F P ++ I L Y P+ Sbjct: 32 LFGFIIAIGLTLI-----RMYHVRFLEPIAKFYVSFFR--STPAILHIMLIY---LGIPL 81 Query: 251 LGQF---NFIGGSTVS--PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305 L F +F G + + P + + IALS A++ EI+RSG++AV GQMEAA ++G Sbjct: 82 LVDFLSKSFGLGISANKIPVVVFVIIALSFTAGAYLTEILRSGIMAVDIGQMEAAYSVGY 141 Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365 TH +A R VLLPQA +P T+ + L +S+A V ++ + + + +E Sbjct: 142 THGQAIRKVLLPQAFMIALPNFTNLCIGFLHTTSIAAIVAVPEITGMATIVASDNYAFLE 201 Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIA 393 + IY L+I+I L IA Sbjct: 202 AFIGAALIYWFLTILIEAINYILEKNIA 229 >gi|326793483|ref|YP_004311303.1| polar amino acid ABC transporter inner membrane subunit [Marinomonas mediterranea MMB-1] gi|326544247|gb|ADZ89467.1| polar amino acid ABC transporter, inner membrane subunit [Marinomonas mediterranea MMB-1] Length = 216 Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 48/160 (30%), Positives = 84/160 (52%), Gaps = 5/160 (3%) Query: 237 LIALKYQLHFDKPVLGQ--FNFIGGSTVSPE---FMSLYIALSCYTAAFIAEIVRSGLIA 291 L+A+ +L P+L Q F G S + E + + +AL+ +T+AF+ EI R + Sbjct: 52 LVAVYIELFQGTPLLMQMFLCFFGVSLLGYEISAWSAAILALTLFTSAFLVEIWRGCIDT 111 Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 +P+GQ EA+ LG++ + R ++LPQA+R I P + ++K ++LA +GF +L Sbjct: 112 LPKGQWEASRCLGMSFLQILRYIILPQALRVAIAPTVGFSVQVVKGTALASVIGFVELTK 171 Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 G + N T + ++ + IY L ++L L K Sbjct: 172 AGTMLNNATFEPFKVFAMVAVIYFLLCYPLSLSSKILEKK 211 >gi|320531679|ref|ZP_08032619.1| ABC transporter, permease protein [Actinomyces sp. oral taxon 171 str. F0337] gi|320136099|gb|EFW28107.1| ABC transporter, permease protein [Actinomyces sp. oral taxon 171 str. F0337] Length = 218 Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 42/115 (36%), Positives = 65/115 (56%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P F S+ +AL ++ F+ E VRSG+ +VP+GQ+EAA ALG+ R ++LPQA+ Sbjct: 82 PLFWSVVVALIFSSSGFVCETVRSGINSVPKGQIEAARALGMPFGLIIRGIVLPQALART 141 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378 I PL + ++ L SSLA A+G +L +V I + L YL+++ Sbjct: 142 IQPLVNIFIACLIGSSLAAAIGVVELTAVTQKINQDRAAGVITFLTSGLTYLAIA 196 >gi|15888716|ref|NP_354397.1| ABC transporter, membrane spanning protein [Agrobacterium tumefaciens str. C58] gi|15156458|gb|AAK87182.1| ABC transporter, membrane spanning protein [Agrobacterium tumefaciens str. C58] Length = 219 Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 36/114 (31%), Positives = 63/114 (55%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P +++ + L + AAF+ EI R + +V +GQ EA+ +L + + R V+LPQAMR Sbjct: 84 PAWLAAGLTLILWAAAFLTEIWRGCVESVAKGQWEASASLAMGRLQQMRYVILPQAMRVA 143 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377 IPP ++ ++K +++ +GF +L G + N T Q + + IY +L Sbjct: 144 IPPTVGFFVQVIKGTAVTSIIGFVELSKAGTVVTNATFQPFTVYGLVALIYFAL 197 >gi|116670891|ref|YP_831824.1| polar amino acid ABC transporter inner membrane subunit [Arthrobacter sp. FB24] gi|116611000|gb|ABK03724.1| amino acid ABC transporter membrane protein, PAAT family [Arthrobacter sp. FB24] Length = 221 Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 32/83 (38%), Positives = 58/83 (69%), Gaps = 1/83 (1%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G T+SP + S IA S + AE++R+ +++VP+GQ EA +G++ R++ ++LPQ Sbjct: 83 GVTISP-WPSAIIAFSLNVGGYAAEVIRAAILSVPKGQWEAGHTIGMSRRQSLVRIILPQ 141 Query: 319 AMRSIIPPLTSQYLNLLKNSSLA 341 A R +PPL++ +++L+K++SLA Sbjct: 142 AARVSVPPLSNTFISLVKDTSLA 164 >gi|29840303|ref|NP_829409.1| amino acid ABC transporter, permease protein [Chlamydophila caviae GPIC] gi|29834652|gb|AAP05287.1| amino acid ABC transporter, permease protein [Chlamydophila caviae GPIC] Length = 217 Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 59/211 (27%), Positives = 109/211 (51%), Gaps = 21/211 (9%) Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233 RG + T+ + +F +LG+++ T SR+F + + L LY++ +I G P Sbjct: 13 RGCGY---TLCVSGISILFGSLLGLII---GTMTSRYFPCRITRWLGNLYVT--VIRGTP 64 Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293 + I + Y F P + + + M+ IALS ++A++AE +R G+ A+ Sbjct: 65 LFIQILIFY---FGLPSIIRLD-------PTPLMAGLIALSINSSAYLAESIRGGINALS 114 Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353 GQ E+A LG + ++ PQ ++I+P LT++++ L+K SS+ + VG +L V Sbjct: 115 VGQWESAKVLGYKKSQIFAYIIYPQVFKNILPSLTNEFVALIKESSILMVVGVPELTKVS 174 Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 I+++ +E+ I +YL +M +LF Sbjct: 175 KDIVSRELNPMEMYSICAALYL---LMTSLF 202 >gi|23098014|ref|NP_691480.1| amino acid ABC transporter permease [Oceanobacillus iheyensis HTE831] gi|22776238|dbj|BAC12515.1| amino acid ABC transporter permease [Oceanobacillus iheyensis HTE831] Length = 237 Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 42/129 (32%), Positives = 73/129 (56%), Gaps = 7/129 (5%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IA+ A+++E+VRS ++AV +GQ EAA AL ++ + RLV+ PQA+R ++P + Sbjct: 108 IAIGLNYGAYLSEVVRSSILAVSKGQSEAATALNMSRFQRMRLVIFPQAVRMMLPEFGNY 167 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIIN----QTGQAIEIILIWMFIYLSLSIMIALFMN 386 + +LK +SL +G D++ G ++ N + G I + + + L+L + +F Sbjct: 168 TIQILKGTSLVSLIGLQDILYHGESLRNVSSMEMGGLIYFVALIFYFVLALPL---IFFT 224 Query: 387 RLNAKIALK 395 R KIA K Sbjct: 225 RKAEKIAKK 233 >gi|323529955|ref|YP_004232107.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia sp. CCGE1001] gi|323386957|gb|ADX59047.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. CCGE1001] Length = 248 Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 49/163 (30%), Positives = 81/163 (49%), Gaps = 24/163 (14%) Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286 F+ FGLP+L +H D E + +A++ A+ EIVR Sbjct: 75 FVFFGLPSL-------GIHID-----------------EIQAAILAMTVNLGAYAIEIVR 110 Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346 +G+ ++ RGQ++AA ALGL R+ R ++LPQA+ ++ P L SQ L ++ S++ + Sbjct: 111 AGIDSISRGQVQAAQALGLHGRQVFRYIVLPQALANVFPALLSQVLIVMLGSAVVSQISV 170 Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 DL I ++ ++ E +I YL LSI + +NR Sbjct: 171 PDLTYAANFIQSRNFRSFESYVIITATYLLLSIALRQILNRFG 213 >gi|157145940|ref|YP_001453259.1| hypothetical protein CKO_01693 [Citrobacter koseri ATCC BAA-895] gi|157083145|gb|ABV12823.1| hypothetical protein CKO_01693 [Citrobacter koseri ATCC BAA-895] Length = 225 Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 50/163 (30%), Positives = 86/163 (52%), Gaps = 17/163 (10%) Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256 G+VL+ A R L++ I G+P LI + + + + P+L + Sbjct: 46 GVVLACLAWRFPGVIRNG-------LFLWAEFIRGIP---LIFVIFWMWYLLPMLTGSDL 95 Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316 G TV+ +AL+ +TAA + V +G+ A+P GQ +A++ G +A L+LL Sbjct: 96 PGAVTVT-------LALAWFTAASVMHSVYAGINALPAGQYDASVVQGFRPFQALWLILL 148 Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359 PQ +R+++P LT ++ LLK++SLA V +L +V G + N+ Sbjct: 149 PQVLRNVMPSLTGIFIGLLKDTSLAFIVNVPELTTVAGQVNNR 191 >gi|293606725|ref|ZP_06689078.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Achromobacter piechaudii ATCC 43553] gi|292814875|gb|EFF74003.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Achromobacter piechaudii ATCC 43553] Length = 230 Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 52/164 (31%), Positives = 86/164 (52%), Gaps = 15/164 (9%) Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249 V S + G+ L+L H + P+ F I P LV I Y +++ P Sbjct: 35 LVLSVLAGVPLALL------HMSHRAAVWRPVAAYVQF-IRSTPLLVQI---YLVYYAVP 84 Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309 +L I G+ E + +A++ + AA+++EI+R G+ +VPRGQ+E A A G+ + + Sbjct: 85 ML-----IPGAKGWSEMVLGIMAMTLHHAAYMSEIIRVGIESVPRGQIEGAKACGMNYHQ 139 Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353 R V+LPQA + +PPL Q L+K++SL + +LV+ G Sbjct: 140 RLRYVVLPQAFVNTLPPLLGQTAVLIKDTSLLSLITVFELVAAG 183 >gi|289522550|ref|ZP_06439404.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Anaerobaculum hydrogeniformans ATCC BAA-1850] gi|289504386|gb|EFD25550.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Anaerobaculum hydrogeniformans ATCC BAA-1850] Length = 232 Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 66/216 (30%), Positives = 102/216 (47%), Gaps = 19/216 (8%) Query: 185 TNAKIFVFSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLI 238 T K F+F L IV F T L R F + L Y+ LI G P L+ Sbjct: 20 TLMKGLAFTFELAIVAMFFGTILGVLLALGRSFGNRLLSWLCTAYVE--LIRGTP---LL 74 Query: 239 ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQME 298 A + L+F P G I S VS F+ + +AA+ AE R + AV Q + Sbjct: 75 AQLFILYFALPPYG----IRLSAVSVAFLGFILN----SAAYQAEYTRGSIEAVGEDQFK 126 Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN 358 AA +LG+ + V+LPQA+R IP ++++ LLK +S+A +G DL++ G I + Sbjct: 127 AAYSLGMGKWQTIFYVVLPQAIRWSIPAWMNEFIYLLKCTSIAYIIGAPDLLTQGKFIAS 186 Query: 359 QTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394 + Q + LI IYL + + + ++ K+ + Sbjct: 187 RNYQFFRVYLIVAIIYLVIVLAATWIVGKIEQKVQI 222 Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 34/105 (32%), Positives = 55/105 (52%), Gaps = 13/105 (12%) Query: 83 SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142 S++ T ++ G TF LA M TI+G L+ GR N+L++W+C YVE+ R P L Sbjct: 16 SNFGT-LMKGLAFTFELAIVAMFFGTILGVLLALGRSFGNRLLSWLCTAYVELIRGTPLL 74 Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187 +F LY + LP P+G+ L+ ++F +++ A Sbjct: 75 AQLFILYFA----LP--------PYGIRLSAVSVAFLGFILNSAA 107 >gi|291302057|ref|YP_003513335.1| polar amino acid ABC transporter inner membrane subunit [Stackebrandtia nassauensis DSM 44728] gi|290571277|gb|ADD44242.1| polar amino acid ABC transporter, inner membrane subunit [Stackebrandtia nassauensis DSM 44728] Length = 242 Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 47/143 (32%), Positives = 76/143 (53%), Gaps = 8/143 (5%) Query: 257 IGGSTVSP-----EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311 IGG + P F I L + + + AE+ R+G+ VP+GQ EA AL L R Sbjct: 98 IGGWEIGPLDFGGPFFVGVIVLGIHYSTYTAEVYRAGIDGVPKGQWEAITALSLPKRYGW 157 Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV--SVGGTIINQTGQAIEIILI 369 + V+LPQA+R +IP L + +++ K + +A+G AD++ + N G A+E I Sbjct: 158 QHVILPQALRRVIPALGNYIISMFKEVPVLIAIGLADMIYKTQEFQAANFAG-AVEGYTI 216 Query: 370 WMFIYLSLSIMIALFMNRLNAKI 392 I+L+ S IA+ M +L ++ Sbjct: 217 AGLIFLAASYPIAVAMRKLENRL 239 >gi|139439311|ref|ZP_01772753.1| Hypothetical protein COLAER_01769 [Collinsella aerofaciens ATCC 25986] gi|133775335|gb|EBA39155.1| Hypothetical protein COLAER_01769 [Collinsella aerofaciens ATCC 25986] Length = 382 Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 45/186 (24%), Positives = 94/186 (50%), Gaps = 2/186 (1%) Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269 F + G+ +Y + ++ G P +V L Y F F + + F + Sbjct: 190 RFFKSIGRGFATIY--STIVRGTPMMVQGLLIYYAGFTVLRGMGFETAQANQIWSTFTAG 247 Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329 + +S + A++ E++R G+ ++ GQ EAA +LGL+ +A R V+ PQ +++ IP LT+ Sbjct: 248 LVTISLNSTAYMMEVLRGGIESIDAGQAEAARSLGLSQWQAMRKVVFPQGIKNAIPALTN 307 Query: 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 + + +K+SS+ +G DL+ T+ + +E+ + + +YL L+++ + + Sbjct: 308 ELIINIKDSSVLSVIGVFDLMYATTTVAGVYYRQMEVYCVALVVYLILTLVASRLLEAFG 367 Query: 390 AKIALK 395 K+ + Sbjct: 368 KKLGAE 373 >gi|28377653|ref|NP_784545.1| glutamine ABC transporter, substrate binding and permease protein [Lactobacillus plantarum WCFS1] gi|254555834|ref|YP_003062251.1| glutamine ABC transporter, substrate binding and permease protein [Lactobacillus plantarum JDM1] gi|308179813|ref|YP_003923941.1| glutamine ABC superfamily ATP binding cassette transporter, substrate binding and permease protein [Lactobacillus plantarum subsp. plantarum ST-III] gi|28270486|emb|CAD63388.1| glutamine ABC transporter, substrate binding and permease protein [Lactobacillus plantarum WCFS1] gi|254044761|gb|ACT61554.1| glutamine ABC transporter, substrate binding and permease protein [Lactobacillus plantarum JDM1] gi|308045304|gb|ADN97847.1| glutamine ABC superfamily ATP binding cassette transporter, substrate binding and permease protein [Lactobacillus plantarum subsp. plantarum ST-III] Length = 478 Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 43/150 (28%), Positives = 71/150 (47%), Gaps = 21/150 (14%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 + +PL+ ++ F+ G P L+ K P F++ I L Sbjct: 323 RGMPLMVLAFFIYIGFPDLIGHGFKI---------------------PAFVAGMITLMLN 361 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 A+ V+ G AV GQMEAA +LGL + A R V++PQ +R +IP +Q++ LK Sbjct: 362 EGAYTGAFVKGGFAAVDDGQMEAARSLGLPYWTAMRKVIMPQGIRIMIPSFINQFIITLK 421 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 ++S+ +G +L G II + + +I Sbjct: 422 DTSILSVIGIVELTQTGTLIIARNFEGFKI 451 >gi|182441008|dbj|BAG24133.1| probable amino acid permease [Pseudomonas cichorii] Length = 228 Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 42/135 (31%), Positives = 75/135 (55%), Gaps = 1/135 (0%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P ++ ALS A++A V SG+I++ GQ AA ALG++ + RL++LPQA+ + Sbjct: 94 PALFTVVCALSLIGGAYLAHSVHSGIISLSSGQWAAAKALGMSSWQVLRLIILPQALPIM 153 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG-QAIEIILIWMFIYLSLSIMIA 382 +P +Q+++L+K++SLA +G +L V + N+ EI L +Y + + Sbjct: 154 LPSFLNQWISLIKDTSLAYVIGVGELSFVATQVSNRVMVYPTEIFLFIALVYFIICSALD 213 Query: 383 LFMNRLNAKIALKEK 397 L +RL ++K+ Sbjct: 214 LIASRLAGTGSVKKS 228 >gi|323142250|ref|ZP_08077084.1| arginine ABC transporter, permease protein ArtQ [Phascolarctobacterium sp. YIT 12067] gi|322413313|gb|EFY04198.1| arginine ABC transporter, permease protein ArtQ [Phascolarctobacterium sp. YIT 12067] Length = 218 Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 52/175 (29%), Positives = 90/175 (51%), Gaps = 12/175 (6%) Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281 +YIS F G P LV + L Y F P L + S + +S +AA+I Sbjct: 56 IYISVFR--GTPLLVQLMLIY---FATPQLTSYTI---SALEAGVLSF----GLNSAAYI 103 Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341 +E +R G++AV +GQ E A++LG+ + ++LPQA+++ +P L ++ + LLK+SSL Sbjct: 104 SEALRGGILAVDKGQWEGAMSLGVPKHRFLLDIILPQAIKNALPSLVNESIMLLKDSSLV 163 Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 +G AD + I +T +A E ++ +Y L + + L K+ + + Sbjct: 164 SVIGVADTLRWADLIQAKTFRAFEAFIVAAAVYYVLVMALNFLGGLLEKKVRVSD 218 >gi|119897620|ref|YP_932833.1| putative amino acid permease [Azoarcus sp. BH72] gi|119670033|emb|CAL93946.1| putative amino acid permease [Azoarcus sp. BH72] Length = 362 Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 33/79 (41%), Positives = 54/79 (68%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +A++ + AA++AE +R L+A+P GQ +AA ALGL + R +LLPQA+R+ P + + Sbjct: 231 VAITLFAAAYLAEAIRGALLALPDGQRQAAAALGLGWWQTQRHILLPQALRNATPSIANS 290 Query: 331 YLNLLKNSSLAVAVGFADL 349 ++NL K++SL V V +L Sbjct: 291 FINLFKDTSLVVVVSLYEL 309 >gi|91789814|ref|YP_550766.1| amino acid ABC transporter permease [Polaromonas sp. JS666] gi|91699039|gb|ABE45868.1| amino acid ABC transporter membrane protein 2, PAAT family [Polaromonas sp. JS666] Length = 219 Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 53/196 (27%), Positives = 90/196 (45%), Gaps = 21/196 (10%) Query: 207 LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY----QLHFDKPVLGQFNFIGGSTV 262 ++R H + +LYI ++ GLP L+++ L Y + FD P L Sbjct: 41 IARVSHNNLLRNAAVLYIQ--VLQGLPVLLVLFLAYFGLAYMGFDPPAL----------- 87 Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322 + IAL Y A++A+I R + +VP Q EA+ +L +T + R ++LPQ++R Sbjct: 88 ----VIATIALGLYAGAYLADIWRGAMESVPYQQWEASSSLAMTRAQQFRFIILPQSVRI 143 Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382 +PP + L+KN+S+ VG+ DL+ G I + I +Y SL ++ Sbjct: 144 SLPPTVGFLVQLIKNTSIVSVVGYIDLMRAGEHIETSLHSPFMVYGIVALLYFSLCFPLS 203 Query: 383 LFMNRLNAKIALKEKK 398 L K+ + Sbjct: 204 HLSKMLERKVHADRQN 219 >gi|295697138|ref|YP_003590376.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus tusciae DSM 2912] gi|295412740|gb|ADG07232.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus tusciae DSM 2912] Length = 219 Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 41/129 (31%), Positives = 73/129 (56%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P F + I L + A +EI RSGL++V GQ EAA ALGL + V++PQ++ +I Sbjct: 86 PGFEAAVIVLGGFYGALYSEIFRSGLMSVDFGQREAAEALGLRRKTTLLRVIVPQSLLAI 145 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 +PP TS ++L+K+++L + +G +L+ ++T Q + + LI +Y + ++L Sbjct: 146 LPPGTSAAIDLVKDTALVITIGVGELMYQAYQAGSETFQYMNVFLIAGVLYFIVCYGLSL 205 Query: 384 FMNRLNAKI 392 + R + Sbjct: 206 AVRRWERHV 214 >gi|308234142|ref|ZP_07664879.1| amino acid ABC transporter membrane protein 2, PAAT family [Atopobium vaginae DSM 15829] gi|328943633|ref|ZP_08241098.1| hypothetical protein HMPREF0091_10323 [Atopobium vaginae DSM 15829] gi|327491602|gb|EGF23376.1| hypothetical protein HMPREF0091_10323 [Atopobium vaginae DSM 15829] Length = 287 Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 35/96 (36%), Positives = 60/96 (62%) Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342 E+ RSG+ AV +GQ EAA ALG T + + V+LPQA+R +IP L +Q + ++K++++A Sbjct: 160 EVFRSGVHAVAKGQKEAAYALGFTRAQVLQKVVLPQAIRYVIPALIAQLVVVVKDTTVAY 219 Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378 V + DL+ +I + + LI IY++++ Sbjct: 220 VVSYPDLLQNARVLITNYDALVSVYLIVALIYIAIN 255 >gi|229820931|ref|YP_002882457.1| polar amino acid ABC transporter, inner membrane subunit [Beutenbergia cavernae DSM 12333] gi|229566844|gb|ACQ80695.1| polar amino acid ABC transporter, inner membrane subunit [Beutenbergia cavernae DSM 12333] Length = 224 Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 37/75 (49%), Positives = 51/75 (68%), Gaps = 1/75 (1%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + L+ Y AAF+ E +RSG+ VP GQ EAA A+GL+ A R+++LPQA R I PL + Sbjct: 98 LGLAVYHAAFVCESIRSGVNTVPVGQAEAARAIGLSFLPAARIIILPQAFRGAIAPLGNT 157 Query: 331 YLNLLKNSSLAVAVG 345 + L KNS++A AVG Sbjct: 158 LIALTKNSTVA-AVG 171 >gi|170696123|ref|ZP_02887258.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia graminis C4D1M] gi|170138938|gb|EDT07131.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia graminis C4D1M] Length = 258 Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 39/136 (28%), Positives = 83/136 (61%), Gaps = 5/136 (3%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P +++ ALS A+++ V +G+++V GQ +AA++LGLT +A R V+LPQA+R + Sbjct: 94 PGLVAVVCALSLIGGAYLSHAVHAGIVSVGAGQQQAALSLGLTRWQALRHVVLPQAVRIM 153 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS-IMIA 382 +P +Q+++L+K++SLA VG + + NQ + I +F+++ + +++ Sbjct: 154 LPSFVNQWVSLVKDTSLAYIVGVPEFT----FLANQVNSRLMIYPAQIFVFVGIVYLVLC 209 Query: 383 LFMNRLNAKIALKEKK 398 + + +++ L+E++ Sbjct: 210 SALQWIASRMLLRERR 225 >gi|118470385|ref|YP_887852.1| ectoine/hydroxyectoine ABC transporter permease protein EhuD [Mycobacterium smegmatis str. MC2 155] gi|118171672|gb|ABK72568.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD [Mycobacterium smegmatis str. MC2 155] Length = 226 Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 37/116 (31%), Positives = 72/116 (62%) Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 +A+ AE+ R+G+ A+P+GQ EAA AL L+ + ++LPQ++ IIP L + + + K+ Sbjct: 108 SAYTAEVYRAGIEALPKGQWEAATALNLSRARTWSRIVLPQSIAMIIPVLGNYLIQMFKD 167 Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393 ++L A+G ++++ +I TGQ +E + I +YL +S + +L + ++ + A Sbjct: 168 TALLYAIGTLEVLTTARSIGQSTGQFLEPLTIAGLMYLIISYVSSLAIRQMERRYA 223 >gi|290893634|ref|ZP_06556616.1| amino acid ABC transporter [Listeria monocytogenes FSL J2-071] gi|290556836|gb|EFD90368.1| amino acid ABC transporter [Listeria monocytogenes FSL J2-071] Length = 235 Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 64/208 (30%), Positives = 103/208 (49%), Gaps = 15/208 (7%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 +F F++ I L+L R +H + + + Y+S F P ++ I L Y P+ Sbjct: 31 LFGFIIAIGLTLI-----RMYHVRFLEPIAKFYVSFFR--STPAILHIMLIY---LGIPL 80 Query: 251 LGQF---NFIGGSTVS--PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305 L F +F G + + P + + IALS A++ EI+RSG++AV GQMEAA ++G Sbjct: 81 LVDFLSKSFGLGISANKIPVVVFVIIALSFTAGAYLTEILRSGIMAVDIGQMEAAYSVGY 140 Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365 TH +A R VLLPQA +P T+ + L +S+A V ++ + + + +E Sbjct: 141 THGQAIRKVLLPQAFMIALPNFTNLCIGFLHTTSIAAIVAVPEITGMATIVASDNYAFLE 200 Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIA 393 + IY L+I+I L IA Sbjct: 201 AFIGAALIYWFLTILIEAINYILEKNIA 228 >gi|282864978|ref|ZP_06274032.1| polar amino acid ABC transporter, inner membrane subunit [Streptomyces sp. ACTE] gi|282560403|gb|EFB65951.1| polar amino acid ABC transporter, inner membrane subunit [Streptomyces sp. ACTE] Length = 295 Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 62/214 (28%), Positives = 102/214 (47%), Gaps = 42/214 (19%) Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI---FGLPTLVLI 238 T+ A V S LG VL++ RLS H P+ ++ST L+ +P LV+I Sbjct: 75 TLKAFAYAAVLSLALGAVLAV--GRLSVH--------RPVRWLSTLLVEFFRAMPVLVMI 124 Query: 239 -----ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293 ALK Q +L L+ Y + +AE+ R+G+ +V Sbjct: 125 FFIFVALKVQ---------------------PLPALVAGLTLYNGSVLAEVFRTGINSVE 163 Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353 RGQ EAA ALG+ + T VL PQA+R+++P + SQ + LK++SL + + + + G Sbjct: 164 RGQREAAYALGMRKTQVTTHVLAPQAVRAMLPTIISQLVVALKDTSLGYLITYEEFLHAG 223 Query: 354 GTIINQTGQAIEIILIWMF---IYLSLSIMIALF 384 I + + I + M IY+ + ++++ F Sbjct: 224 KLIASNLDYDLPFIPVVMVISPIYIGMCMLLSWF 257 Score = 43.1 bits (100), Expect = 0.079, Method: Compositional matrix adjust. Identities = 21/50 (42%), Positives = 34/50 (68%), Gaps = 1/50 (2%) Query: 110 IGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIP 159 +G ++ GRLS ++ V W+ + VE FR +P LV+IFF++ + L V P+P Sbjct: 89 LGAVLAVGRLSVHRPVRWLSTLLVEFFRAMPVLVMIFFIFVA-LKVQPLP 137 >gi|269977205|ref|ZP_06184178.1| ABC-type amino acid transport system, permease component [Mobiluncus mulieris 28-1] gi|269934508|gb|EEZ91069.1| ABC-type amino acid transport system, permease component [Mobiluncus mulieris 28-1] Length = 302 Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 35/76 (46%), Positives = 50/76 (65%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + L A++AEIVR+GL +V GQ EAA ALG+ R ++LPQAMR I+PP ++ Sbjct: 146 LGLGLNEGAYLAEIVRAGLNSVDPGQWEAATALGMKRSLIMRRIILPQAMRVIVPPTGNE 205 Query: 331 YLNLLKNSSLAVAVGF 346 +++LK +SL AV F Sbjct: 206 TISMLKTTSLVSAVPF 221 >gi|241890035|ref|ZP_04777333.1| inner membrane amino-acid ABC transporter permease protein YecS [Gemella haemolysans ATCC 10379] gi|241863657|gb|EER68041.1| inner membrane amino-acid ABC transporter permease protein YecS [Gemella haemolysans ATCC 10379] Length = 214 Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 33/91 (36%), Positives = 57/91 (62%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IA + AA+ AEI R G+ ++P+GQ EAA L T + R V+LPQ ++ ++P + ++ Sbjct: 89 IAFTLNYAAYFAEIFRGGIESIPKGQYEAAKVLKFTQFQTIRYVILPQVIKIVLPSVFNE 148 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361 ++L+K++SL A+G +DL+ T N+ Sbjct: 149 IMSLVKDTSLVYALGISDLILASRTAANRDA 179 >gi|330428743|gb|AEC20077.1| amino-acid ABC transporter permease y4tF [Pusillimonas sp. T7-7] Length = 223 Score = 69.7 bits (169), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 58/206 (28%), Positives = 103/206 (50%), Gaps = 8/206 (3%) Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247 ++ V+S +LG + FA + + T K++ + +I F T +L+ L + L+F Sbjct: 19 QLTVYSTILGAFFA-FAFGIGKLSSNWTAKSVSIFFIEIFR----GTSLLVQL-FWLYFA 72 Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307 P+LGQ +G P ++ +ALS A+ AE+VR + AVP Q EAA AL T Sbjct: 73 LPLLGQA--VGIDLRLPPVVAGTLALSLNIGAYGAEVVRGAIQAVPPTQHEAAKALDFTP 130 Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367 R+ + LPQA+ ++P + + LK+++L + DL I N T ++ I Sbjct: 131 RQVLWRISLPQAIPEMMPSFGNLAVQNLKDTALVSLISLGDLAFRAEQIRNFTQDSVTIY 190 Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIA 393 + +F+Y +++++ M L + Sbjct: 191 TLLLFMYFGMALVLTAIMKLLERSVG 216 >gi|315283401|ref|ZP_07871605.1| L-cystine transport system permease protein TcyM [Listeria marthii FSL S4-120] gi|313612950|gb|EFR86888.1| L-cystine transport system permease protein TcyM [Listeria marthii FSL S4-120] Length = 237 Score = 69.7 bits (169), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 60/196 (30%), Positives = 100/196 (51%), Gaps = 15/196 (7%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 +F F++ I L+L R +H + + + Y+S F P ++ I L Y P+ Sbjct: 33 LFGFIIAIGLTLI-----RMYHVRFLEPIAKFYVSFFR--STPAILHIMLIY---LGIPL 82 Query: 251 LGQF---NFIGGSTVS--PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305 + F +F G + + P + + IALS A++ EI+RSG+IAV GQMEAA ++G Sbjct: 83 IVDFLSKSFDLGISANKIPVVVFVIIALSFTAGAYLTEILRSGIIAVDIGQMEAAYSMGY 142 Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365 TH +A R VLLPQA +P T+ + L +S+A V ++ + + + +E Sbjct: 143 THGQAIRKVLLPQAFMIALPNFTNLCIGFLHTTSIAAIVAVPEITGMATIVASDNYAFLE 202 Query: 366 IILIWMFIYLSLSIMI 381 + IY L+++I Sbjct: 203 AFIGAALIYWFLTMLI 218 >gi|301385505|ref|ZP_07233923.1| arginine/ornithine ABC transporter, permease protein [Pseudomonas syringae pv. tomato Max13] Length = 232 Score = 69.7 bits (169), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 53/167 (31%), Positives = 86/167 (51%), Gaps = 11/167 (6%) Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL----YIALSCYTA 278 ++ T++I G P LV + L Y L QF + S + P S +A + T+ Sbjct: 56 WLYTYVIRGTPMLVQLFLIYY------GLAQFAAVRESFLWPWLSSATFCACLAFAINTS 109 Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338 A+ AEI+ L A P G++EAA A+G++ K R +LLP A+R +PP +++ + +L+ + Sbjct: 110 AYTAEIIAGSLKATPAGEIEAARAMGMSKVKMYRRILLPSALRRALPPYSNEVIMMLQTT 169 Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS-IMIALF 384 SLA V D+ T+ Q E + YL L+ I++ LF Sbjct: 170 SLASIVTLIDITGAARTVNAQFYLPFEAYVTAGVFYLCLTFILVRLF 216 >gi|251789977|ref|YP_003004698.1| arginine transporter permease subunit ArtQ [Dickeya zeae Ech1591] gi|247538598|gb|ACT07219.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya zeae Ech1591] Length = 238 Score = 69.7 bits (169), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 53/183 (28%), Positives = 95/183 (51%), Gaps = 2/183 (1%) Query: 217 KALPLLYISTFLIFGLPTLVLI-ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSC 275 + LP + + F+ FG L+LI + + L+ + I VSP F+ IALS Sbjct: 55 RGLPEILVVLFIYFGSSQLLLILSDGFTLNLGLAQIPVKLAIDNFEVSP-FLCGVIALSL 113 Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335 AA+ ++ +R L AVP+GQ E+ ALG++ R +++PQ R +P L +Q+L LL Sbjct: 114 LYAAYASQTLRGALKAVPQGQWESGQALGMSKGVIFRRLIMPQMWRHALPGLGNQWLVLL 173 Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395 K+++L + DL+ +I +T + +I IYL ++++ + R+ + Sbjct: 174 KDTALVSLISVNDLMLQTKSIATRTQEPFTWYMIAAAIYLVITLLSQAILKRIETRATRF 233 Query: 396 EKK 398 E++ Sbjct: 234 ERR 236 >gi|227487310|ref|ZP_03917626.1| glutamate ABC superfamily ATP binding cassette transporter, permease protein [Corynebacterium glucuronolyticum ATCC 51867] gi|227092736|gb|EEI28048.1| glutamate ABC superfamily ATP binding cassette transporter, permease protein [Corynebacterium glucuronolyticum ATCC 51867] Length = 312 Score = 69.7 bits (169), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 34/88 (38%), Positives = 58/88 (65%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + L+ Y + IAE +R+G++++P GQ EAA ALGL+HR+ +LLPQA+ +++P Sbjct: 142 FAGVVFGLTMYNGSVIAETLRAGILSLPTGQSEAAEALGLSHRQTIWNILLPQAVATMLP 201 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVG 353 L SQ + LK+++L + + ++V G Sbjct: 202 ALISQLVIALKDTALGYMILYVEVVRSG 229 Score = 45.8 bits (107), Expect = 0.011, Method: Compositional matrix adjust. Identities = 31/72 (43%), Positives = 42/72 (58%) Query: 78 PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137 P+ +++ T IL G T A +I A IIG L+G GRLS NK + W C + VE FR Sbjct: 55 PFLKSTTWTTYILPGLWGTLKAALVSIILAIIIGALLGVGRLSKNKAIRWFCGIIVEFFR 114 Query: 138 NIPPLVVIFFLY 149 IP L+++ F Y Sbjct: 115 AIPVLILMIFAY 126 >gi|330954115|gb|EGH54375.1| glutamine ABC transporter, permease protein [Pseudomonas syringae Cit 7] Length = 246 Score = 69.7 bits (169), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 41/133 (30%), Positives = 73/133 (54%), Gaps = 10/133 (7%) Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286 +++ G+P L++I Y F P+L N G F ++ L Y + ++ EI+R Sbjct: 69 YVMRGIPLLMVIFWTY---FLVPLLIGHNITG-------FTTMLCTLVVYQSVYLCEIIR 118 Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346 + A+P GQ EA+ ALG+ + + T V+LPQA+ + +P L SQ+++++K +SL + Sbjct: 119 GAIQALPTGQYEASRALGMGYLRTTVWVILPQALYNALPSLISQFISIIKETSLGYVINV 178 Query: 347 ADLVSVGGTIINQ 359 ++ I NQ Sbjct: 179 QEVTFAANQINNQ 191 >gi|121604397|ref|YP_981726.1| polar amino acid ABC transporter inner membrane subunit [Polaromonas naphthalenivorans CJ2] gi|120593366|gb|ABM36805.1| amino acid ABC transporter membrane protein 2, PAAT family [Polaromonas naphthalenivorans CJ2] Length = 217 Score = 69.7 bits (169), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 43/135 (31%), Positives = 76/135 (56%), Gaps = 1/135 (0%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G ++P +++ +AL ++AF+ EI R + A+P GQ+EAA AL L++ R V+LPQ Sbjct: 79 GFDINP-WIAAGVALILNSSAFLGEIWRGCIQAIPAGQVEAAHALSLSYFSRMRFVILPQ 137 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378 A + + P + ++K +SLA +GF ++ G I N T Q + + + IY +L Sbjct: 138 AFKIALAPTVGYLVQIIKGTSLAAIIGFTEITRAGQIINNATFQPLIVFSVVAAIYFALC 197 Query: 379 IMIALFMNRLNAKIA 393 ++L +R+ + A Sbjct: 198 WPLSLMASRMERRQA 212 >gi|150391392|ref|YP_001321441.1| polar amino acid ABC transporter, inner membrane subunit [Alkaliphilus metalliredigens QYMF] gi|149951254|gb|ABR49782.1| polar amino acid ABC transporter, inner membrane subunit [Alkaliphilus metalliredigens QYMF] Length = 227 Score = 69.7 bits (169), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 56/157 (35%), Positives = 85/157 (54%), Gaps = 14/157 (8%) Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251 FS +LG V L AT L + KA+ + YIS ++ G P L+ QL F L Sbjct: 36 FSILLGTVFGLLATMLKMTKIKPLMKAIDI-YIS--VVRGTPLLL------QLIFIFQAL 86 Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311 + G +SP F+S I L+ + A+I+EI R + ++ GQ EAA ALG+T +A Sbjct: 87 PEI----GIKLSP-FISAVIGLAFHNGAYISEIFRGAIESIDYGQKEAASALGMTKWQAM 141 Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348 + V LPQA + +P L +Q++ +K+SSLA + + Sbjct: 142 KRVTLPQAFKRSVPSLGNQFIIAIKDSSLASVITITE 178 >gi|320355177|ref|YP_004196516.1| PAAT family amino acid ABC transporter membrane protein [Desulfobulbus propionicus DSM 2032] gi|320123679|gb|ADW19225.1| amino acid ABC transporter membrane protein, PAAT family [Desulfobulbus propionicus DSM 2032] Length = 262 Score = 69.3 bits (168), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 39/121 (32%), Positives = 70/121 (57%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + L+ + A+++EI+R+G+ ++ Q+E+A A+GL+ + R V+LPQ +R I+PPL Q Sbjct: 137 LTLAFFAGAYLSEIIRAGIESIGESQIESARAIGLSPLQTYRFVILPQVVRRILPPLAGQ 196 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 + +L+K+SSL + ++ + T +E L YL L++ I+LF L Sbjct: 197 FASLVKDSSLLSIIAVSEFTLNAQEVNAFTYSTLESYLPLAVGYLVLTLPISLFSRHLEQ 256 Query: 391 K 391 K Sbjct: 257 K 257 >gi|310830297|ref|YP_003965397.1| polar amino acid ABC transporter, inner membrane subunit [Ketogulonicigenium vulgare Y25] gi|308753203|gb|ADO44346.1| polar amino acid ABC transporter, inner membrane subunit [Ketogulonicigenium vulgare Y25] Length = 222 Score = 69.3 bits (168), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 44/120 (36%), Positives = 68/120 (56%), Gaps = 1/120 (0%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G ++SP +L +AL A+ EI+R+G+ +VP+GQ+EA AL L + R V+L Sbjct: 83 GISMSPNTAAL-VALVINVGAYGTEIIRAGIESVPQGQVEAGRALALNKVQIFRYVILKP 141 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378 A+R+I P LTSQ++ L+ SS+ + DL + G + +T EI L IY L+ Sbjct: 142 ALRNIYPSLTSQFIYLMLTSSVVSIISANDLAAAGADLSARTFANFEIYLALTIIYFLLA 201 Score = 41.2 bits (95), Expect = 0.28, Method: Compositional matrix adjust. Identities = 20/54 (37%), Positives = 31/54 (57%) Query: 96 TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 T L+FS M+ I+ L + S +++ +I +YVE RN P L+ IFF+Y Sbjct: 23 TVQLSFSAMVLGLIVSILGAVAKTSGGRVLRFIVDIYVEAIRNTPFLIQIFFIY 76 >gi|269102812|ref|ZP_06155509.1| arginine ABC transporter permease protein ArtQ [Photobacterium damselae subsp. damselae CIP 102761] gi|268162710|gb|EEZ41206.1| arginine ABC transporter permease protein ArtQ [Photobacterium damselae subsp. damselae CIP 102761] Length = 242 Score = 69.3 bits (168), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 68/218 (31%), Positives = 105/218 (48%), Gaps = 38/218 (17%) Query: 193 SFVLGIVLSLF--ATRLSRH---FHEKTG-----KALPLLYISTFLIFGLPTLVLIALKY 242 S +G+VL++ A +SRH TG + LP + + F+ FG Sbjct: 24 SLAVGLVLAVIFAAGEMSRHKLLAWTTTGWVTLLRGLPEILVVLFIFFG---------SS 74 Query: 243 QLHFDKPVLGQFNFIGGS--TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300 Q+ F +I G VSP F+S IALS +A+ ++ +R L AV +GQ EAA Sbjct: 75 QILF---------YITGDYIEVSP-FLSGVIALSLIFSAYASQTIRGALKAVSKGQREAA 124 Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 ALGL+ + ++LPQ +R +P LT+Q+L LLK+++L +G DL+ T Sbjct: 125 SALGLSSGRTFFKIILPQTVRHALPGLTNQWLVLLKDTALVSLIGVTDLLKQA----QLT 180 Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 A W ++ ++I L +L I + EKK Sbjct: 181 SAATHESFTWYATAAAIYLVITLLTQQL---IKVVEKK 215 Score = 40.4 bits (93), Expect = 0.44, Method: Compositional matrix adjust. Identities = 18/67 (26%), Positives = 38/67 (56%) Query: 83 SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142 + Y+ ++L T LAF+ + ++ + AG +S +KL+AW +V + R +P + Sbjct: 4 TGYSLSLLEASWMTIQLAFTSLAVGLVLAVIFAAGEMSRHKLLAWTTTGWVTLLRGLPEI 63 Query: 143 VVIFFLY 149 +V+ F++ Sbjct: 64 LVVLFIF 70 >gi|239941505|ref|ZP_04693442.1| putative amino acid ABC transporter permease protein [Streptomyces roseosporus NRRL 15998] gi|239987969|ref|ZP_04708633.1| putative amino acid ABC transporter permease protein [Streptomyces roseosporus NRRL 11379] gi|291444949|ref|ZP_06584339.1| ectoine/hydroxyectoine ABC transporter [Streptomyces roseosporus NRRL 15998] gi|291347896|gb|EFE74800.1| ectoine/hydroxyectoine ABC transporter [Streptomyces roseosporus NRRL 15998] Length = 243 Score = 69.3 bits (168), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 41/112 (36%), Positives = 65/112 (58%) Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 A+ AE+VR + +VPRGQ EAAIAL L+ + V+LPQA +IP T+ + LLK Sbjct: 101 GAYGAEVVRGAINSVPRGQYEAAIALNLSPTRRLWKVILPQAWVQMIPSFTNLLIQLLKA 160 Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 + L + ADL++V + ++TG+ + L + +Y L+ + + MN L Sbjct: 161 TPLLWLLSAADLMTVVQQLRDRTGETVTAYLTLLAVYFVLAYALTMLMNLLE 212 >gi|167587239|ref|ZP_02379627.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ubonensis Bu] Length = 245 Score = 69.3 bits (168), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 56/167 (33%), Positives = 91/167 (54%), Gaps = 17/167 (10%) Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252 S VLG+ L + A L+R + + L L +I F +P L+LI + +F P+L Sbjct: 40 SAVLGVALGV-AMALARGW----ARVLLLAFIGFFR--AIPVLMLI---FWTYFLMPMLL 89 Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312 + G +TV AL+ A++A V +G++A GQ +A ++LGLT + R Sbjct: 90 HTDVPGLATV-------VCALALIGGAYLAHAVHAGIVAAGAGQWQAGLSLGLTRWQTVR 142 Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359 VLLPQA+R + P +Q+++L+K++SLA VG +L V + N+ Sbjct: 143 YVLLPQAIRIMTPSFVNQWVSLVKDTSLAYIVGVPELSFVATQVNNR 189 >gi|219670587|ref|YP_002461022.1| polar amino acid ABC transporter inner membrane subunit [Desulfitobacterium hafniense DCB-2] gi|219540847|gb|ACL22586.1| polar amino acid ABC transporter, inner membrane subunit [Desulfitobacterium hafniense DCB-2] Length = 221 Score = 69.3 bits (168), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 54/177 (30%), Positives = 87/177 (49%), Gaps = 24/177 (13%) Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279 PLL FL FGLP L G T+S E + LS + Sbjct: 66 PLLIQVYFLYFGLPKL-----------------------GVTLS-ETACAILGLSFLGGS 101 Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339 ++AE +R G+ AV + Q+E+ ++LGL+ + R V+ PQA IP L + + LLK +S Sbjct: 102 YMAEALRGGMEAVSKSQIESGLSLGLSRWQLIRYVVFPQAFSFSIPALGANCIFLLKETS 161 Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 + A+ DL++V +I Q +E +L+ + YL + + ++LF+ L K+ E Sbjct: 162 VLGAIAILDLMNVTKDLIGMYYQTVESLLMLVVSYLIILLPLSLFLTWLERKVRYAE 218 >gi|119383469|ref|YP_914525.1| polar amino acid ABC transporter, inner membrane subunit [Paracoccus denitrificans PD1222] gi|119373236|gb|ABL68829.1| amino acid ABC transporter membrane protein 1, PAAT family [Paracoccus denitrificans PD1222] Length = 215 Score = 69.3 bits (168), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 42/131 (32%), Positives = 70/131 (53%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P + + + +A+I+EI R + A+PRGQ EAA+A+G+T R V+LPQA Sbjct: 85 PAIFAAVVTVGICASAYISEIWRGAIAALPRGQAEAAVAIGMTPRDTWTRVILPQAFTMS 144 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 +P L ++ + L+K SSL VG +L T + +E+ L IYL++++ +A Sbjct: 145 LPALVNELILLVKASSLVSVVGILELTRASQAQAATTFRPLEVYLAAACIYLAINLCLAA 204 Query: 384 FMNRLNAKIAL 394 L + A+ Sbjct: 205 LGRYLEHRTAV 215 >gi|299483523|gb|ADJ19604.1| putative ABC-type amino acid transporter [Treponema primitia ZAS-2] Length = 189 Score = 69.3 bits (168), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 34/77 (44%), Positives = 54/77 (70%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + LS AF++E +R+ L++V GQ EAA +LG+T+ + R ++LPQA+R +PPL + Sbjct: 96 VVLSLNVGAFMSESIRAALMSVDEGQKEAAYSLGMTNLQLMRRIILPQAVRVALPPLFND 155 Query: 331 YLNLLKNSSLAVAVGFA 347 +NL+K+SSLA +G A Sbjct: 156 MINLIKSSSLAFMLGVA 172 >gi|119961590|ref|YP_946400.1| amino acid ABC transporter permease [Arthrobacter aurescens TC1] gi|119948449|gb|ABM07360.1| putative amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Arthrobacter aurescens TC1] Length = 262 Score = 69.3 bits (168), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 55/181 (30%), Positives = 95/181 (52%), Gaps = 17/181 (9%) Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQ-FNFIGGSTVSPEFMSL-YIALSCYTAAFI 281 I T L GLP ++ I L +GQ F + S P L IALS +A+I Sbjct: 67 IYTDLFRGLPAILTILL----------IGQGFARLSQSVFGPSPYPLGIIALSLIASAYI 116 Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341 EI R+G+ +V +GQ EA ALG+++ K+ LV++PQ +R ++P L +Q++ ++K+SSL Sbjct: 117 GEIFRAGIQSVDKGQGEACRALGMSYSKSMALVVVPQGIRRVLPALVNQFIAIVKDSSLV 176 Query: 342 VAVGF----ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 +G +L VG +G +++ +F YL +++ + +N + K + Sbjct: 177 YFLGLLVSERELFRVGQDAAVLSGNLSPLVMAGIF-YLIITVPLTHLVNYFDNKFRTGRR 235 Query: 398 K 398 + Sbjct: 236 R 236 >gi|313904157|ref|ZP_07837536.1| polar amino acid ABC transporter, inner membrane subunit [Eubacterium cellulosolvens 6] gi|313470959|gb|EFR66282.1| polar amino acid ABC transporter, inner membrane subunit [Eubacterium cellulosolvens 6] Length = 238 Score = 69.3 bits (168), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 47/196 (23%), Positives = 100/196 (51%), Gaps = 21/196 (10%) Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKAL-------PLLYI 224 NNR L + + ++ I + + LG+VL + + + ++ G A + ++ Sbjct: 19 NNRWLLYLK-GLGSSLVITLGALALGVVLGILVAVVRTNHDQRKGHASLGLKIINGICHV 77 Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284 T +I G P +V + + F+ S+ + +M ++L + A+++EI Sbjct: 78 YTTVIRGTPMMVQLLI-------------MGFVIFSSSTHYYMIAILSLGINSGAYVSEI 124 Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344 +R G++++ GQMEA +LG+ + + +++PQA+++I+P L ++ + L K++SL + Sbjct: 125 IRGGIMSIDPGQMEAGRSLGMGYATVMKDIIIPQAIKNILPALGNELITLFKDTSLVSVI 184 Query: 345 GFADLVSVGGTIINQT 360 G +L V I +T Sbjct: 185 GMTELTKVARDIQART 200 >gi|238024848|ref|YP_002909080.1| ABC-type amino acid transport system, permease [Burkholderia glumae BGR1] gi|237879513|gb|ACR31845.1| ABC-type amino acid transport system, permease component [Burkholderia glumae BGR1] Length = 216 Score = 69.3 bits (168), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 39/128 (30%), Positives = 70/128 (54%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P +++ + L+ +T+A++AEI R + AVPRGQ EA+ +L +++ + R V+LPQA R Sbjct: 84 PPWLAATLGLTFFTSAYLAEIWRGCVEAVPRGQWEASASLAMSYLEQLRHVILPQAARIA 143 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 + P + +K+++L +GF +L G I N T + + + IY +L + Sbjct: 144 VGPTVGFGVQAIKDTALVSIIGFTELTKAGTMISNATFRPFLVYGLVALIYFALCYPLTR 203 Query: 384 FMNRLNAK 391 + L K Sbjct: 204 WARSLQRK 211 >gi|254250640|ref|ZP_04943959.1| ABC transporter, permease protein [Burkholderia cenocepacia PC184] gi|124879774|gb|EAY67130.1| ABC transporter, permease protein [Burkholderia cenocepacia PC184] Length = 237 Score = 69.3 bits (168), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 63/206 (30%), Positives = 100/206 (48%), Gaps = 18/206 (8%) Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240 +T++ +A V F +G+V+ RL+ H +T Y+ F G+P LV + L Sbjct: 41 MTLEVSAAGLVLGFCIGLVVC--CGRLAPHVAIRTAAGA---YVRVFR--GVPLLVQLLL 93 Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300 Y F+G + P M+ A+S +AA+IAEI+R G +P+GQ+EAA Sbjct: 94 VYYF---------LPFVGLNV--PPVMAAVSAVSLCSAAYIAEILRGGFANLPKGQLEAA 142 Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 LG + + +PQA+R +P L ++ + L+K SSL VG A++ I T Sbjct: 143 TMLGFSATDRLWRIQVPQAVRMTLPSLVNEMVLLIKASSLVSVVGVAEITRTAQNIAAST 202 Query: 361 GQAIEIILIWMFIYLSLSIMIALFMN 386 Q +E + IY L +AL + Sbjct: 203 YQPLEAYVAAGMIYFLLCGSLALIAH 228 >gi|89895379|ref|YP_518866.1| hypothetical protein DSY2633 [Desulfitobacterium hafniense Y51] gi|89334827|dbj|BAE84422.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 262 Score = 69.3 bits (168), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 63/217 (29%), Positives = 111/217 (51%), Gaps = 28/217 (12%) Query: 180 TLTMDT----NAKIFVFSFVLGIVLSLFATRLS---RHFHEKTGKA--LPLLYISTF--- 227 TL +DT AK F+ F++ I+++ F+ LS F GK+ LPL Y S Sbjct: 46 TLRLDTVYLYRAK-FIDGFLMTIIIAFFSLILSLIIGSFLAFAGKSRFLPLHYFSKAYVE 104 Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGST--VSPEFMSLYIALSCYTAAFIAEIV 285 +I G P LV I + F +I + +S ++ I LS ++ A+I EI+ Sbjct: 105 IIRGTPLLVQIYV-------------FFYIIATAMHLSNRYVLGVIILSVFSGAYICEII 151 Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345 R+G+ ++ Q+E A +LG T + R +++PQ + I+PPL Q ++L+K+SSL + Sbjct: 152 RAGIESIEASQIETARSLGFTSYQRYRYIIIPQVFKRILPPLAGQLVSLIKDSSLLSVIA 211 Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382 ++L + + T E ++ +Y+ L++ I+ Sbjct: 212 VSELTKNVQEVDSFTFATFENYIVLALLYMILTVPIS 248 >gi|297570733|ref|YP_003696507.1| polar amino acid ABC transporter inner membrane protein [Arcanobacterium haemolyticum DSM 20595] gi|296931080|gb|ADH91888.1| polar amino acid ABC transporter, inner membrane subunit [Arcanobacterium haemolyticum DSM 20595] Length = 323 Score = 69.3 bits (168), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 36/79 (45%), Positives = 53/79 (67%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+ + L A++AEIVRSGL +V GQ EAA ALG+++ R ++LPQAMR I+P Sbjct: 154 FLFAVLGLGLNEGAYLAEIVRSGLNSVDPGQEEAAKALGMSNGMILRRIVLPQAMRVIVP 213 Query: 326 PLTSQYLNLLKNSSLAVAV 344 P ++ +++LK +SL AV Sbjct: 214 PTGNETISMLKTTSLVTAV 232 >gi|293376247|ref|ZP_06622490.1| ABC transporter, permease protein [Turicibacter sanguinis PC909] gi|325845168|ref|ZP_08168477.1| ABC transporter, permease protein [Turicibacter sp. HGF1] gi|292645139|gb|EFF63206.1| ABC transporter, permease protein [Turicibacter sanguinis PC909] gi|325488833|gb|EGC91233.1| ABC transporter, permease protein [Turicibacter sp. HGF1] Length = 253 Score = 69.3 bits (168), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 47/170 (27%), Positives = 92/170 (54%), Gaps = 20/170 (11%) Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290 G P +V Y H +P+LG + G + +S T A++AEI+RSG+ Sbjct: 86 GTPMMVQAMFLY--HALRPILGWSSLTAGIVI----------ISVNTGAYMAEIIRSGIQ 133 Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 +V +GQ+EAA ++G+T ++ ++LPQA+++ P + ++++ +K+SS+ +G ++ Sbjct: 134 SVDKGQLEAARSIGMTAFQSMMYIILPQAIKNAFPSIGNEFIVNIKDSSMLNVIGVIEVF 193 Query: 351 ----SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 SV G+++ + E I IYL L+ + A + + K+ +K+ Sbjct: 194 FQSKSVAGSVMLYS----ETFFITCLIYLVLTTITAQILGWIEKKMNVKK 239 >gi|134278113|ref|ZP_01764827.1| ABC amino acid transporter, inner membrane subunit [Burkholderia pseudomallei 305] gi|134249897|gb|EBA49977.1| ABC amino acid transporter, inner membrane subunit [Burkholderia pseudomallei 305] Length = 255 Score = 69.3 bits (168), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 45/128 (35%), Positives = 76/128 (59%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 E + +A++ A+ EIVR+G+ ++PRGQ++AA+ALGL R+ R V+LPQA+ ++ Sbjct: 89 EMQAAVLAMTVNLGAYALEIVRAGIDSIPRGQIQAAMALGLQGRQVFRYVVLPQALANVF 148 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 P L Q L ++ S++ + DL I ++ ++ E +I IYL LSI++ L Sbjct: 149 PALLGQVLIVMLGSAVVSQISVPDLTYAANFIQSRNFRSFESYVIITAIYLLLSIVLRLL 208 Query: 385 MNRLNAKI 392 +NRL + Sbjct: 209 INRLGKDL 216 >gi|239834901|ref|ZP_04683229.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium LMG 3301] gi|239822964|gb|EEQ94533.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium LMG 3301] Length = 595 Score = 69.3 bits (168), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 40/133 (30%), Positives = 75/133 (56%), Gaps = 3/133 (2%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + ++ L+ +AF AEIVR G+++V +GQ EAA ALGL + ++LPQAMRSI+P Sbjct: 166 FAAAFLGLTLNQSAFFAEIVRGGILSVDQGQHEAAAALGLPRTRQALRIVLPQAMRSILP 225 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL---IWMFIYLSLSIMIA 382 ++ + L K +S+ + +L I + + I +++ +W + +++ + Sbjct: 226 TGFNEIIGLAKGTSMVYVLALPELFYTVQVIYRRNLEVIPLLMVATVWYLVIMTVLSVAQ 285 Query: 383 LFMNRLNAKIALK 395 ++ R AK A++ Sbjct: 286 YYIERYFAKGAVR 298 >gi|209549650|ref|YP_002281567.1| polar amino acid ABC transporter inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209535406|gb|ACI55341.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 268 Score = 69.3 bits (168), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 54/191 (28%), Positives = 98/191 (51%), Gaps = 18/191 (9%) Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240 L + + + + +G+ + F L + EK+ + +Y + F GLP L+ + Sbjct: 51 LGLQVTVSVAIVTLPIGLAIG-FLVALGQQSEEKSLRLAAGIYTTIFR--GLPELLTL-- 105 Query: 241 KYQLHFDKPVLGQ--FNFIGGSTVSPE---FMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295 + +++ +L Q F+G E F++ IALS +A+ +E++ S A+P+G Sbjct: 106 -FIIYYGMQMLIQSLLTFVGYDGPPVEINAFLAGVIALSVVFSAYCSEVLLSAFRAIPKG 164 Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355 Q EA +LGL H + RL++LPQ +R +P LT+ ++ LLK++S + AD Sbjct: 165 QYEAGDSLGLHHGRTLRLIILPQLVRIALPGLTNLWMVLLKDTSYVSIISLAD------- 217 Query: 356 IINQTGQAIEI 366 I+ QT A+ + Sbjct: 218 ILRQTSVAVRV 228 >gi|14601702|ref|NP_148243.1| ABC transporter, permease protein [Aeropyrum pernix K1] gi|5105584|dbj|BAA80897.1| ABC transporter, permease protein [Aeropyrum pernix K1] Length = 220 Score = 69.3 bits (168), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 60/177 (33%), Positives = 92/177 (51%), Gaps = 14/177 (7%) Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248 I + S +G +SL T +R K + YI+ F G P LV I + + F Sbjct: 22 ITIISLSMGFTISLILTA-ARFLGFKPLRMAAEAYINFFR--GTPLLVQILMVF---FGL 75 Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308 P LG N F S IA+ + A+ AEI+R + +P QM A +LGL+ Sbjct: 76 PSLG-VNL-------SAFYSAVIAIGLNSGAYQAEILRVAIKGIPEEQMLVARSLGLSEI 127 Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365 + + V++PQA+R+ IP LT++ + LLK SSLA +G +L VG +++ T +A+E Sbjct: 128 EIMKGVVIPQAVRNAIPGLTNETVILLKESSLASVIGVMELTRVGEYMVSATFRALE 184 >gi|325663781|ref|ZP_08152182.1| hypothetical protein HMPREF0490_02923 [Lachnospiraceae bacterium 4_1_37FAA] gi|331087298|ref|ZP_08336367.1| hypothetical protein HMPREF0987_02670 [Lachnospiraceae bacterium 9_1_43BFAA] gi|325470114|gb|EGC73348.1| hypothetical protein HMPREF0490_02923 [Lachnospiraceae bacterium 4_1_37FAA] gi|330408389|gb|EGG87860.1| hypothetical protein HMPREF0987_02670 [Lachnospiraceae bacterium 9_1_43BFAA] Length = 239 Score = 69.3 bits (168), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 46/174 (26%), Positives = 94/174 (54%), Gaps = 24/174 (13%) Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY---TA 278 +YI+ +I G P +V + + Y L F S + +L + C+ + Sbjct: 77 IYIT--IIRGTPVMVQLLIIYNLIF---------------TSRDTNALLVGAVCFGINSG 119 Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338 A++AEI+R+G+ ++ +GQMEA +LGL + + + +++PQA+++I+P L ++++ L+K + Sbjct: 120 AYVAEIIRAGIESIDKGQMEAGRSLGLNYLQTMKEIIIPQAIKNILPALGNEFIVLIKET 179 Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILI----WMFIYLSLSIMIALFMNRL 388 S+A + DL I + T + + + ++ I L L+ ++ LF R+ Sbjct: 180 SVAGVIAVTDLTKAAQYIGSATYDILPPLYVAAVCYLVIVLGLTKLLNLFERRM 233 >gi|221370065|ref|YP_002521161.1| Polar amino acid ABC transporter, inner membrane subunit precursor [Rhodobacter sphaeroides KD131] gi|221163117|gb|ACM04088.1| Polar amino acid ABC transporter, inner membrane subunit precursor [Rhodobacter sphaeroides KD131] Length = 370 Score = 69.3 bits (168), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 37/132 (28%), Positives = 74/132 (56%), Gaps = 3/132 (2%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 + + + + ++ + A + AE++R GL A+P GQ EAA +L L++ + TR ++LPQA+R + Sbjct: 235 KLLRITVGIAIFFACYQAEVIRGGLQAIPTGQYEAAASLSLSYWQTTRRIILPQALRISL 294 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA---IEIILIWMFIYLSLSIMI 381 P +T+ + +KN+S + +G D+++ ++ IE L +YL + Sbjct: 295 PAITNHIIAAMKNTSFVIIIGLFDILTATTAVMQDPLWRKFYIEAYLFVAAVYLFFGYAL 354 Query: 382 ALFMNRLNAKIA 393 +L+ ++ IA Sbjct: 355 SLYARQVEKWIA 366 >gi|89092422|ref|ZP_01165376.1| general amino acid ABC transporter, permease protein [Oceanospirillum sp. MED92] gi|89083510|gb|EAR62728.1| general amino acid ABC transporter, permease protein [Oceanospirillum sp. MED92] Length = 366 Score = 69.3 bits (168), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 41/145 (28%), Positives = 84/145 (57%), Gaps = 11/145 (7%) Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315 F G+ V + + ++I L+ + A ++AE+ R G AVP GQ EAA +LGL++ + T L++ Sbjct: 221 FPEGTNVD-KLVRVWIVLTLFMAGYMAEVFRGGFQAVPTGQYEAADSLGLSYWQKTLLII 279 Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT----GQAIEIILIWM 371 LPQ ++ +P + + ++ L KN++ + +G +++S T + + G + E Sbjct: 280 LPQVIKVSMPNILATFVMLFKNTTFLLIIGIFEVLSTTQTALTNSNWLGGHSTE-----G 334 Query: 372 FIYLSLSIMIALF-MNRLNAKIALK 395 ++++++ I + M+R++A I K Sbjct: 335 YLFVAIVFWICCYSMSRISASIERK 359 >gi|15925403|ref|NP_372937.1| ABC transporter (permease protein) [Staphylococcus aureus subsp. aureus Mu50] gi|15927991|ref|NP_375524.1| hypothetical protein SA2201 [Staphylococcus aureus subsp. aureus N315] gi|21284064|ref|NP_647152.1| hypothetical protein MW2335 [Staphylococcus aureus subsp. aureus MW2] gi|156980728|ref|YP_001442987.1| hypothetical protein SAHV_2397 [Staphylococcus aureus subsp. aureus Mu3] gi|262048821|ref|ZP_06021702.1| hypothetical protein SAD30_0668 [Staphylococcus aureus D30] gi|262051565|ref|ZP_06023786.1| hypothetical protein SA930_1333 [Staphylococcus aureus 930918-3] gi|13702362|dbj|BAB43503.1| SA2201 [Staphylococcus aureus subsp. aureus N315] gi|14248187|dbj|BAB58575.1| ABC transporter (permease protein) [Staphylococcus aureus subsp. aureus Mu50] gi|21205507|dbj|BAB96200.1| MW2335 [Staphylococcus aureus subsp. aureus MW2] gi|156722863|dbj|BAF79280.1| hypothetical protein [Staphylococcus aureus subsp. aureus Mu3] gi|259160549|gb|EEW45572.1| hypothetical protein SA930_1333 [Staphylococcus aureus 930918-3] gi|259163079|gb|EEW47640.1| hypothetical protein SAD30_0668 [Staphylococcus aureus D30] gi|285818074|gb|ADC38561.1| amino acid ABC transporter, permease protein [Staphylococcus aureus 04-02981] Length = 164 Score = 69.3 bits (168), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 30/70 (42%), Positives = 52/70 (74%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I LS A+ +EI+R G+I++P+GQ EAA ++G+T+ + + ++LPQA+R IP L + Sbjct: 37 IGLSLNVGAYASEIIRGGIISIPKGQTEAAYSIGMTYGQTIQRIILPQAIRVSIPALGNT 96 Query: 331 YLNLLKNSSL 340 +L+L+K++SL Sbjct: 97 FLSLIKDTSL 106 >gi|312961852|ref|ZP_07776350.1| amino acid ABC transporter, permease protein [Pseudomonas fluorescens WH6] gi|311284111|gb|EFQ62694.1| amino acid ABC transporter, permease protein [Pseudomonas fluorescens WH6] Length = 233 Score = 69.3 bits (168), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 55/177 (31%), Positives = 86/177 (48%), Gaps = 10/177 (5%) Query: 226 TFLIFGLPTLVLI-----ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280 T LI +P LVLI +L+ L+ G F + P F + I L A+ Sbjct: 58 TTLIRSVPDLVLILLIFYSLQLWLNDLTETFGWDYF----EIDP-FTAGVITLGFIYGAY 112 Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340 E R +++VP GQ+EAA A GL+ + RLVL PQ MR +P L + +L LLK+++L Sbjct: 113 FTENFRGAILSVPVGQLEAATAYGLSRWQRFRLVLFPQLMRFALPGLGNNWLVLLKSTAL 172 Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 +G +DLV T + + +++ +YL ++ + RL + L K Sbjct: 173 VSIIGLSDLVKAAQNAGKTTSEPLYFLILAGLVYLVITTLSNRIFKRLERRYNLGIK 229 >gi|269138890|ref|YP_003295591.1| amino-acid ABC transporter permease component [Edwardsiella tarda EIB202] gi|267984551|gb|ACY84380.1| amino-acid ABC transporter permease component [Edwardsiella tarda EIB202] gi|304558876|gb|ADM41540.1| amino-acid ABC transporter permease component [Edwardsiella tarda FL6-60] Length = 233 Score = 69.3 bits (168), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 39/124 (31%), Positives = 71/124 (57%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + I + A+ +EIVR +++VPRGQ EAA A+G++ +A R V+LPQ++ +P Sbjct: 103 FPAALIGFTLNVGAYSSEIVRGAILSVPRGQWEAASAIGMSSAQAMRRVILPQSVFVSLP 162 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PL++ +++L+K++SLA + ++ I+ + + I IYL+ S ++ Sbjct: 163 PLSNAFISLIKDTSLAAVITVPEMFLAAQRIVAVNYEPLIIYSETALIYLAFSTLLGKLQ 222 Query: 386 NRLN 389 RL Sbjct: 223 LRLE 226 >gi|254393591|ref|ZP_05008723.1| amino acid ABC transporter permease protein [Streptomyces clavuligerus ATCC 27064] gi|294812810|ref|ZP_06771453.1| Putative polar amino acid ABC transporter substrate-binding protein [Streptomyces clavuligerus ATCC 27064] gi|326441240|ref|ZP_08215974.1| amino acid ABC transporter permease protein [Streptomyces clavuligerus ATCC 27064] gi|197707210|gb|EDY53022.1| amino acid ABC transporter permease protein [Streptomyces clavuligerus ATCC 27064] gi|294325409|gb|EFG07052.1| Putative polar amino acid ABC transporter substrate-binding protein [Streptomyces clavuligerus ATCC 27064] Length = 249 Score = 69.3 bits (168), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 42/121 (34%), Positives = 65/121 (53%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +AL A+ +E+VR L AVP GQ EAA+ALG + T VLLPQA +I PL + Sbjct: 91 LALGLTYGAYGSEVVRGALAAVPAGQREAALALGFGPARTTARVLLPQAWPEMIRPLNNL 150 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 + L+K ++L +G +DL + N TGQ+ + + + Y L+ ++ M L Sbjct: 151 LVELVKGTALVSVMGVSDLAFGAALVRNATGQSAPVYTVILVAYFLLAFVLTRGMRALER 210 Query: 391 K 391 + Sbjct: 211 R 211 >gi|170697555|ref|ZP_02888645.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria IOP40-10] gi|170137578|gb|EDT05816.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria IOP40-10] Length = 603 Score = 69.3 bits (168), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 45/148 (30%), Positives = 82/148 (55%), Gaps = 7/148 (4%) Query: 256 FIGGST---VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312 F+ G T ++P FM+ + L+ AAF AE +R G+++V GQ EAA ALGL + T Sbjct: 156 FLRGPTTDLITP-FMAAILGLTLTQAAFAAEAIRGGILSVEHGQREAAAALGLPRARQTW 214 Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL---I 369 ++LPQAMR+I+P + + L K +++ + DL I ++ + I +++ + Sbjct: 215 RIVLPQAMRAILPAAFNDVIGLAKGTAVVYILAMPDLFYTVQIIYHRNLEVIPMLMVATV 274 Query: 370 WMFIYLSLSIMIALFMNRLNAKIALKEK 397 W + L++ I + + R A+ A +++ Sbjct: 275 WYLVILTVLSAIQVHIERHYARGATRDQ 302 >gi|78061685|ref|YP_371593.1| amino acid ABC transporter inner membrane protein [Burkholderia sp. 383] gi|77969570|gb|ABB10949.1| amino acid ABC transporter membrane protein, PAAT family [Burkholderia sp. 383] Length = 219 Score = 69.3 bits (168), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 59/207 (28%), Positives = 104/207 (50%), Gaps = 14/207 (6%) Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247 K V S LG+V+ L + R + +L Y+S L+ G P LV + + +++ Sbjct: 23 KFAVASMALGLVVGLVIA-IMRIGSNRLAASLAQGYVS--LMRGTPLLVQM---FVVYYG 76 Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307 P LG T+ P ++ L+ A+++E +R ++ + RGQ AA +LGLTH Sbjct: 77 LPDLG-------ITLDPTTAGIF-TLTLNAGAYLSESMRGAILGIGRGQWAAAHSLGLTH 128 Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367 + R V+ PQA+R +P L + ++L+K++SL + +L+ +I T Q + + Sbjct: 129 VQTLRYVVCPQALRLAVPSLGNTLISLIKDTSLVSVITVTELLRSTQEVIAATFQPLPLY 188 Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIAL 394 L IY LS ++ R+ ++AL Sbjct: 189 LAAAAIYWVLSTLLTRLQGRVETRLAL 215 >gi|257868424|ref|ZP_05648077.1| ABC-type amino acid transporter [Enterococcus gallinarum EG2] gi|257802588|gb|EEV31410.1| ABC-type amino acid transporter [Enterococcus gallinarum EG2] Length = 250 Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 51/170 (30%), Positives = 89/170 (52%), Gaps = 4/170 (2%) Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288 I G P LV + Y +++ P L Q I S+ + + + +YI TAAF +E R+ Sbjct: 64 IRGTPILVQL---YVVYYGVPALLQMIQIDVSSWN-KIIFIYITYGLNTAAFQSETFRAA 119 Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348 +++VP Q EA+IA GLT + R V+LPQ +R +P + + LL+++SLA +G D Sbjct: 120 ILSVPVTQKEASIACGLTKTQMYRQVILPQVVRVALPAFGTTTIALLQDTSLAFTIGVVD 179 Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 +V I T +E + ++++LS ++ L +++ + K Sbjct: 180 VVGKARAIGAVTFHTLEGYVGAAILFITLSFLLERVFTGLERRMSFSKTK 229 >gi|225868397|ref|YP_002744345.1| transport system membrane protein [Streptococcus equi subsp. zooepidemicus] gi|225701673|emb|CAW98991.1| transport system membrane protein [Streptococcus equi subsp. zooepidemicus] Length = 217 Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 39/125 (31%), Positives = 71/125 (56%) Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329 Y+ S +AA+I+E+ R+ + A+ +GQ EAA ALGL + + V+LPQA R IPPL + Sbjct: 91 YLGFSLVSAAYISEVFRASIDAIDQGQWEAARALGLPYISIVKHVILPQAFRIAIPPLGN 150 Query: 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 ++++K+SSLA + D+ I + + + ++ FIY ++ ++ + L Sbjct: 151 VVIDMVKSSSLAAMITVPDIFQKAKIIGGREWDYMSMYILVAFIYWVIAFLLERCQSFLE 210 Query: 390 AKIAL 394 ++ L Sbjct: 211 KRLRL 215 >gi|330961754|gb|EGH62014.1| amino acid ABC transporter permease [Pseudomonas syringae pv. maculicola str. ES4326] Length = 277 Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 47/123 (38%), Positives = 76/123 (61%) Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326 M+ IALS A+++EI R+G+I V GQ EAA+AL L + V LPQAMR+IIPP Sbjct: 144 MAGVIALSLNYGAYLSEIFRAGIIGVAAGQREAALALALRPAQIFWRVTLPQAMRTIIPP 203 Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386 T+Q++++LK+SSL +G +++ + + + + IE++ +Y +SI + L + Sbjct: 204 TTNQFISMLKDSSLISVMGVWEVMFLAQSYGRSSYRYIEMLTTAAVLYWIMSIGLELLQS 263 Query: 387 RLN 389 RL Sbjct: 264 RLE 266 >gi|325062210|gb|ADY65900.1| amino acid ABC transporter, membrane spanning protein [Agrobacterium sp. H13-3] Length = 217 Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 41/128 (32%), Positives = 68/128 (53%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P F + + LS YTAA+ EIVR G+ AVP A +LG+T + R ++LP A R Sbjct: 85 PPFTTSCVVLSLYTAAYCTEIVRGGIEAVPSNTRRACRSLGMTWSQDMRYIVLPLATRVS 144 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 +P L ++K+S+L + +G +L+ ++ + + + I++I IY +S IA Sbjct: 145 LPAWIGLTLGVMKDSALVLWLGLIELLRASQILVTRLQEPLTILMICGAIYFLISFPIAR 204 Query: 384 FMNRLNAK 391 F L + Sbjct: 205 FGGYLERR 212 >gi|197303849|ref|ZP_03168885.1| hypothetical protein RUMLAC_02588 [Ruminococcus lactaris ATCC 29176] gi|197297142|gb|EDY31706.1| hypothetical protein RUMLAC_02588 [Ruminococcus lactaris ATCC 29176] Length = 236 Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 38/122 (31%), Positives = 76/122 (62%) Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 + A+I+EI+RSG+ +V GQMEA A+GL+ + +++PQA+++I+P L +++++L+K Sbjct: 114 SGAYISEIMRSGIQSVDPGQMEAGRAVGLSFGTSMTKIVIPQAVKNILPTLGNEFISLVK 173 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 +S+ VG ADL I + + + + L+ IY++L ++I L + L + + Sbjct: 174 ETSVVSFVGAADLYVAFNYIGSNSYEFMVPYLVMALIYIALVLIITLLVKILERSLKKSD 233 Query: 397 KK 398 ++ Sbjct: 234 RR 235 Score = 40.8 bits (94), Expect = 0.38, Method: Compositional matrix adjust. Identities = 29/110 (26%), Positives = 53/110 (48%), Gaps = 6/110 (5%) Query: 71 EIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRL-----SANKLV 125 ++D+ I + + Y +L G NT +A G+I +IGTL+ R+ + K++ Sbjct: 7 KVDKFIEIFLDQNGY-VKVLQGLQNTLMIAICGLIIGIVIGTLIATVRVIPKYKTLPKVL 65 Query: 126 AWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRG 175 IC YV +FR P +V + Y +L ++ + + + +F N G Sbjct: 66 NHICSFYVALFRGTPMVVQLLVFYYVLLPIIGVKITGVQVAMVVFGLNSG 115 >gi|148828331|ref|YP_001293084.1| arginine transporter permease subunit ArtQ [Haemophilus influenzae PittGG] gi|148719573|gb|ABR00701.1| arginine ABC transporter permease protein [Haemophilus influenzae PittGG] Length = 221 Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 57/209 (27%), Positives = 105/209 (50%), Gaps = 13/209 (6%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY--QLHFDK 248 V S +LG+ LSL + L + GK + + + L+ GLP ++++ L Y + Sbjct: 21 VCSLILGLFLSLIFSALEAN--RFVGKPMTVFVV---LLRGLPEIIVVLLVYFGSTELVE 75 Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308 + G++ G F +ALS AA+ ++ +R + A+P+GQ E+ ALGL+ Sbjct: 76 MLTGEYIEFGA------FGCGVLALSLIFAAYASQTLRGAIQAIPKGQWESGAALGLSKS 129 Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368 +++PQ R +P L++Q+L LLK+++L +G DL+ I T Q Sbjct: 130 YTFIHIVMPQVWRHALPGLSTQWLVLLKDTALVSLIGVDDLMHQADLINTNTHQPFTWYG 189 Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKEK 397 I IYL+++++ + + +L + E+ Sbjct: 190 IAALIYLAVTLISQVGIRKLELRFTRFER 218 >gi|15890313|ref|NP_355985.1| ABC transporter, membrane spanning protein (amino acid) [Agrobacterium tumefaciens str. C58] gi|15158516|gb|AAK88770.1| ABC transporter, membrane spanning protein (amino acid) [Agrobacterium tumefaciens str. C58] Length = 217 Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 41/128 (32%), Positives = 68/128 (53%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P F + + LS YTAA+ EIVR G+ AVP A +LG+T + R ++LP A R Sbjct: 85 PPFTTSCVVLSLYTAAYCTEIVRGGIGAVPSNTRRACRSLGMTWSQDMRYIVLPLATRVS 144 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 +P L ++K+S+L + +G +L+ ++ + + + I++I IY +S IA Sbjct: 145 LPSWIGLTLGVMKDSALVLWLGLIELLRASQILVTRLQEPLTILMICGAIYFLISFPIAR 204 Query: 384 FMNRLNAK 391 F L + Sbjct: 205 FGGYLERR 212 >gi|317403730|gb|EFV84215.1| amino acid ABC transporter [Achromobacter xylosoxidans C54] Length = 230 Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 42/121 (34%), Positives = 72/121 (59%), Gaps = 8/121 (6%) Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292 P LV I Y +++ P+L + G+ E + +A++ + AA+++EI+R G+ +V Sbjct: 71 PLLVQI---YLVYYAVPML-----VPGAKGWSEMLLGILAMTLHHAAYMSEIIRVGIESV 122 Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352 PRGQ+E A A G+ + + R V+LPQA + +PPL Q L+K++SL + +LV+ Sbjct: 123 PRGQIEGAKACGMNYHQRLRYVVLPQAFANTLPPLLGQTAVLIKDTSLLSLITVFELVAA 182 Query: 353 G 353 G Sbjct: 183 G 183 >gi|315640932|ref|ZP_07896028.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus italicus DSM 15952] gi|315483350|gb|EFU73850.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus italicus DSM 15952] Length = 269 Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 48/137 (35%), Positives = 75/137 (54%), Gaps = 4/137 (2%) Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288 I G P LV + Y +++ P L + I S+ + F +YI TAAF +E +R+ Sbjct: 81 IRGTPILVQL---YVVYYGVPTLLEAVNIDVSSWNKIFF-IYITYGLNTAAFQSETIRAA 136 Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348 +++VP Q EAAIA GLT ++ R V+LPQ +R +P + + LL+++SLA +G D Sbjct: 137 ILSVPATQKEAAIACGLTRVQSYRKVILPQMVRVALPSFGTTTVALLQDTSLAFTIGVID 196 Query: 349 LVSVGGTIINQTGQAIE 365 +V I T +E Sbjct: 197 VVGKAKAIGAVTFHTLE 213 >gi|293602767|ref|ZP_06685207.1| amino acid ABC superfamily ATP binding cassette transporter, permease protein [Achromobacter piechaudii ATCC 43553] gi|292818783|gb|EFF77824.1| amino acid ABC superfamily ATP binding cassette transporter, permease protein [Achromobacter piechaudii ATCC 43553] Length = 218 Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 40/129 (31%), Positives = 69/129 (53%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P +++ AL+ ++ AF+AEI R + A+P+GQ EA+ +L L + + R V+LPQA+R Sbjct: 84 PPWLAAGAALTLWSGAFLAEIWRGCVEAIPKGQWEASASLALGYVQQMRYVVLPQALRIA 143 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 I P + ++K+++L +GF +L I N T + IY +L ++ Sbjct: 144 IAPTVGFAVQIVKSTALTSIIGFTELSKASTVITNATFSPFTVYACAALIYFALCWPLSR 203 Query: 384 FMNRLNAKI 392 RL K+ Sbjct: 204 LSLRLERKL 212 >gi|293606209|ref|ZP_06688572.1| ectoine/hydroxyectoine ABC superfamily ATP binding cassette transporter, membrane protein [Achromobacter piechaudii ATCC 43553] gi|292815356|gb|EFF74474.1| ectoine/hydroxyectoine ABC superfamily ATP binding cassette transporter, membrane protein [Achromobacter piechaudii ATCC 43553] Length = 217 Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 37/132 (28%), Positives = 75/132 (56%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P + + L+ A+ AE+VR + AVP GQ EA +AL LT + R +++PQA+ ++ Sbjct: 86 PAMLVGIVVLALNAGAYGAEVVRGAIRAVPPGQREAGVALNLTRAQIMRRIVVPQAVPAM 145 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 +PP + + L+KN++L + DL G + ++T + EI + + +Y +++++I Sbjct: 146 LPPAGNLLIELMKNTALVSLITITDLTFRGQLLRSETLRTTEIFTLMLLMYFAVALVITA 205 Query: 384 FMNRLNAKIALK 395 + L ++ ++ Sbjct: 206 GVRALERRVRVR 217 Score = 36.2 bits (82), Expect = 8.8, Method: Compositional matrix adjust. Identities = 17/35 (48%), Positives = 22/35 (62%) Query: 115 GAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 G GRLS + + W+ VYVEVFR LV +F+ Y Sbjct: 41 GIGRLSPLRPLRWLSSVYVEVFRGTSALVQLFWFY 75 >gi|111021335|ref|YP_704307.1| ABC amino acid transporter, permease component [Rhodococcus jostii RHA1] gi|110820865|gb|ABG96149.1| ABC amino acid transporter, permease component [Rhodococcus jostii RHA1] Length = 243 Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 41/121 (33%), Positives = 64/121 (52%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +AL A+ AE+VR + +VP+ Q EAA AL +H + R V+ PQA +IPPLT+ Sbjct: 93 LALGLNYGAYGAEVVRGAINSVPQSQWEAATALDFSHWQRLRRVVFPQAWAEMIPPLTNL 152 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 + LLK ++LA + DL + TG + + + IY + ++ L MN L Sbjct: 153 LIQLLKGTALASYILLQDLTFEIDQLRQTTGNTLFAFGVGLVIYFVIGYVLTLVMNALEV 212 Query: 391 K 391 + Sbjct: 213 R 213 >gi|104781754|ref|YP_608252.1| amino acid ABC transporter permease [Pseudomonas entomophila L48] gi|95110741|emb|CAK15454.1| putative amino acid ABC transporter, permease protein [Pseudomonas entomophila L48] Length = 239 Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 65/209 (31%), Positives = 108/209 (51%), Gaps = 25/209 (11%) Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTF--LIFGLP---TLVLIALKYQLHFDKPV 250 LG+V++L A ++ K LP + +TF + GLP TL++I Q+ K + Sbjct: 40 LGLVVALAA---------RSRKRLPRAWATTFSTVFRGLPELLTLLIIYYGCQIAAQK-I 89 Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 L + G ++ F++ IA S AAF +EI +P+GQ+EA ALGL R Sbjct: 90 LAALGYPGEVLIN-TFLAAMIAFSLVFAAFSSEIWLMAFKTLPKGQLEACSALGLGRRTG 148 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370 V+LPQ R +P L++ +L+LLK++SL + DL + QT A+ + Sbjct: 149 FFKVVLPQLARIALPGLSNNWLSLLKDTSLVSTISLIDL-------MRQTNLAVSVTKEP 201 Query: 371 MFIYLSLSIMIALFMNRLNAKI-ALKEKK 398 MF Y ++ ++ L + L+ ++ AL E++ Sbjct: 202 MFFY-GVACLVYLLFSALSGRVFALLERR 229 >gi|227818836|ref|YP_002822807.1| amino acid ABC transporter permease [Sinorhizobium fredii NGR234] gi|36959094|gb|AAQ87519.1| Transporter [Sinorhizobium fredii NGR234] gi|227337835|gb|ACP22054.1| probable amino acid ABC transporter, permease protein [Sinorhizobium fredii NGR234] Length = 222 Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 42/115 (36%), Positives = 66/115 (57%), Gaps = 1/115 (0%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +AL A+ EI+R G+ +V RGQ+EA ALGL RL++L A+R+I P LTSQ Sbjct: 95 LALGINGGAYAIEIIRGGVESVSRGQIEAGFALGLHKADVFRLIVLKPALRAIYPSLTSQ 154 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS-IMIALF 384 ++ L +S+ ++ +L S I + T ++ E+ IYL +S +M+ LF Sbjct: 155 FIMLTLTTSVCTSIAAYELTSAAQRIESDTFRSFEVYFTVTAIYLVISTLMMGLF 209 >gi|257066001|ref|YP_003152257.1| polar amino acid ABC transporter, inner membrane subunit [Anaerococcus prevotii DSM 20548] gi|256797881|gb|ACV28536.1| polar amino acid ABC transporter, inner membrane subunit [Anaerococcus prevotii DSM 20548] Length = 490 Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 38/118 (32%), Positives = 71/118 (60%), Gaps = 4/118 (3%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I+ + ++A++AE+ R G+ +V +G+ EAA +LGL++ + + V++PQA+++ +P L ++ Sbjct: 366 ISFALNSSAYMAELFRGGINSVSKGEKEAARSLGLSNLQMMKKVVMPQAVKNSLPALGNE 425 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388 + L K +S+A +G ADL +I+QT A IYL +I L M ++ Sbjct: 426 VITLFKETSIAGFIGLADLTRGASIVISQTFDAATAYFSAAIIYL----VIVLVMEKI 479 >gi|195978272|ref|YP_002123516.1| probable amino-acid ABC transporter permease protein [Streptococcus equi subsp. zooepidemicus MGCS10565] gi|195974977|gb|ACG62503.1| probable amino-acid ABC transporter permease protein [Streptococcus equi subsp. zooepidemicus MGCS10565] Length = 217 Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 39/125 (31%), Positives = 70/125 (56%) Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329 Y+ S +AA+I+E+ R+ + A+ +GQ EAA ALGL + + V+LPQA R IPPL + Sbjct: 91 YLGFSLVSAAYISEVFRASIDAIDQGQWEAARALGLPYVSIVKHVILPQAFRIAIPPLGN 150 Query: 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 ++++K+SSLA + D+ I + + + ++ FIY ++ ++ L Sbjct: 151 VVIDMVKSSSLAAMITVPDIFQKAKIIGGREWDYMSMYILVAFIYWVIAFLLERCQGFLE 210 Query: 390 AKIAL 394 ++ L Sbjct: 211 KRLRL 215 >gi|194288894|ref|YP_002004801.1| amino acid ABC transporter [Cupriavidus taiwanensis LMG 19424] gi|193222729|emb|CAQ68732.1| putative amino acid ABC transporter, membrane component [Cupriavidus taiwanensis LMG 19424] Length = 219 Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 58/208 (27%), Positives = 106/208 (50%), Gaps = 18/208 (8%) Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249 VF +LG V++L H + KA+ Y+S ++ G P LV I + +++ P Sbjct: 29 MVFGLMLGTVVALMGIS-----HSRVLKAVARGYVS--IMRGTPLLVQI---FVVYYGLP 78 Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309 +G + P + + LS A+++E +R ++ V RGQ AA +LGLT + Sbjct: 79 GIG-------IALEPTPAGV-LTLSLNVGAYLSESMRGAILGVARGQWLAAYSLGLTPAQ 130 Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369 A R V+ PQA+R +P L++ ++L+K++SL + +L+ +I T Q + + L Sbjct: 131 ALRYVIGPQALRLAVPSLSNSLISLIKDTSLVSVITVTELLRTAQEVIAATYQPLPLYLA 190 Query: 370 WMFIYLSLSIMIALFMNRLNAKIALKEK 397 IY LS ++ ++L +++L + Sbjct: 191 VAAIYWVLSTALSGLQHKLERRLSLPGR 218 >gi|209552105|ref|YP_002284021.1| polar amino acid ABC transporter inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209539698|gb|ACI59629.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 222 Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 53/148 (35%), Positives = 81/148 (54%), Gaps = 12/148 (8%) Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287 LI G+P L+L+ + + F PV + G +S F S +AL+ + A E R+ Sbjct: 62 LIRGVPVLILL---FWIFFCLPV------VTGLEIS-NFFSSTLALTLFMGAATCESFRA 111 Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLP-QAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346 L ++P Q +A ALGLT++ V++P AMR+I P L S + L K SSLA AVG Sbjct: 112 ALKSIPHEQYDACTALGLTNKSRLLDVVVPLMAMRAI-PNLLSNTVALFKESSLASAVGT 170 Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIY 374 +L+ +G I N T + IE++ + +Y Sbjct: 171 VELMYIGQNIANSTARPIEVLTVVGILY 198 >gi|89093224|ref|ZP_01166174.1| general amino acid ABC transporter, permease protein [Oceanospirillum sp. MED92] gi|89082520|gb|EAR61742.1| general amino acid ABC transporter, permease protein [Oceanospirillum sp. MED92] Length = 366 Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 41/145 (28%), Positives = 84/145 (57%), Gaps = 11/145 (7%) Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315 F G+ V + + ++I L+ + A ++AE+ R G AVP GQ EAA +LGL++ + T L++ Sbjct: 221 FPEGTNVD-KLVRVWIVLTLFMAGYMAEVFRGGFQAVPTGQYEAADSLGLSYWQKTLLII 279 Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT----GQAIEIILIWM 371 LPQ ++ +P + + ++ L KN++ + +G +++S T + + G + E Sbjct: 280 LPQVIKVSMPNILATFVMLFKNTTFLLIIGIFEVLSTTQTALTNSNWLGGHSTE-----G 334 Query: 372 FIYLSLSIMIALF-MNRLNAKIALK 395 ++++++ I + M+R++A I K Sbjct: 335 YLFVAIVFWICCYSMSRISASIERK 359 >gi|227327468|ref|ZP_03831492.1| ABC transporter permease protein [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 221 Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 38/107 (35%), Positives = 65/107 (60%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +AL+ Y+AA+ EI R+GL ++ GQ E A ALG+ H R V+LPQ +R+++P LT++ Sbjct: 96 LALTLYSAAYCTEIFRAGLQSIDHGQWEGAKALGMRHSVILRRVVLPQVLRNMLPALTNR 155 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377 + L K +SLA + +L+ G + + + +EI+ + +Y L Sbjct: 156 MIELAKVTSLASILAVNELMYQGRLLSSTYYRPLEILTVVALLYFVL 202 >gi|254245480|ref|ZP_04938801.1| Glutamine ABC transporter [Burkholderia cenocepacia PC184] gi|124870256|gb|EAY61972.1| Glutamine ABC transporter [Burkholderia cenocepacia PC184] Length = 252 Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 57/165 (34%), Positives = 88/165 (53%), Gaps = 17/165 (10%) Query: 195 VLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQF 254 VLG+ L + A L+R + L L +I F +P L+LI + +F PVL Sbjct: 53 VLGVALGV-AMALAR----GPARVLLLAFIGFFR--AIPVLMLI---FWTYFLMPVLLHM 102 Query: 255 NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLV 314 N G +TV AL+ A++A V +G++A GQ +A ++LGLT + R V Sbjct: 103 NVPGLATV-------VCALALIGGAYLAHAVHAGIVAAGDGQWQAGLSLGLTRWQTVRYV 155 Query: 315 LLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359 LLPQA+R + P +Q++ L+K++SLA VG +L V + N+ Sbjct: 156 LLPQAIRIMTPSFVNQWVALVKDTSLAYIVGVPELSFVATQVNNR 200 >gi|308068846|ref|YP_003870451.1| Probable amino-acid ABC transporter permease protein ytmL [Paenibacillus polymyxa E681] gi|305858125|gb|ADM69913.1| Probable amino-acid ABC transporter permease protein ytmL [Paenibacillus polymyxa E681] Length = 259 Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 39/133 (29%), Positives = 76/133 (57%), Gaps = 3/133 (2%) Query: 269 LYIALSCY---TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 L+ A++ Y + AFI+EI+RSG+ AV RGQ+EAA ++G++ + +++PQA+ ++P Sbjct: 97 LWFAVATYALNSGAFISEIIRSGVEAVDRGQIEAAQSVGMSGYQTFTRIIMPQALAVVVP 156 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 ++ + LK++SLA +G ++ T+ + T +E + IYL +S+++ Sbjct: 157 VFSNLVIGNLKDTSLAFTIGAMEMTGKSQTLGSATQHFVETYIALSLIYLVISLILQKLF 216 Query: 386 NRLNAKIALKEKK 398 L + E + Sbjct: 217 KVLENTLLRHEHR 229 >gi|262277478|ref|ZP_06055271.1| general L-amino acid transport system permease protein AapM [alpha proteobacterium HIMB114] gi|262224581|gb|EEY75040.1| general L-amino acid transport system permease protein AapM [alpha proteobacterium HIMB114] Length = 348 Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 43/131 (32%), Positives = 77/131 (58%), Gaps = 9/131 (6%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IA++ + AA++AE+VR GL AV RGQ +A+ A+G+ + K+ ++LPQA++ +IP + + Sbjct: 220 IAITLFEAAYMAEVVRGGLQAVGRGQYDASKAIGMGYWKSHIFIILPQALKLVIPGIANT 279 Query: 331 YLNLLKNSSLAVAVGFAD---LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF-MN 386 ++ L K++ L VG + +V++ T G A E +++++L I F M+ Sbjct: 280 FIALFKDTPLVFVVGLLEILGMVNLAKTNPAWLGMATE-----GYVFVALVYWIFCFAMS 334 Query: 387 RLNAKIALKEK 397 R + I K K Sbjct: 335 RYSLSIEEKLK 345 >gi|238750615|ref|ZP_04612115.1| Polar amino acid ABC transporter, inner membrane subunit [Yersinia rohdei ATCC 43380] gi|238711263|gb|EEQ03481.1| Polar amino acid ABC transporter, inner membrane subunit [Yersinia rohdei ATCC 43380] Length = 219 Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 51/176 (28%), Positives = 92/176 (52%), Gaps = 18/176 (10%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 V F +G+V+ L + H G+ +YIS F G P L + L + L + Sbjct: 31 VAGFFIGVVIYLMESG-----HSGFGRGFARVYISLFR--GTPVLAQVLLCFYLPGE--- 80 Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 +G S P +++ +AL+ TAA+ ++I+RSG A+ GQ+EAA GL+ R+ Sbjct: 81 ------LGLSL--PGYLAAVMALTFNTAAYQSQILRSGFKAIAPGQLEAAAMCGLSSRQT 132 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 + +PQ +R +P L S+ ++++K S++ + DL+ VG + + T + +E+ Sbjct: 133 LWHIQIPQVLRLTMPSLISELIDVIKASAVVSVIAITDLMRVGQQLASATYRPLEV 188 >gi|218283465|ref|ZP_03489465.1| hypothetical protein EUBIFOR_02055 [Eubacterium biforme DSM 3989] gi|218215847|gb|EEC89385.1| hypothetical protein EUBIFOR_02055 [Eubacterium biforme DSM 3989] Length = 240 Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 51/188 (27%), Positives = 97/188 (51%), Gaps = 18/188 (9%) Query: 213 EKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIA 272 + G+ + LYI F G P +V Y + KPV+G G I Sbjct: 64 KNIGRIITGLYIWIFR--GTPMMVQAMFIY--YAGKPVIGWTPITAG----------LII 109 Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 +S T A++AEI+RSG+ +V +GQ EAA++LG+T + V+ PQA+++ P + +Q + Sbjct: 110 ISINTGAYMAEIIRSGIQSVDKGQNEAAMSLGMTTMQTLMYVVFPQAIKNSFPSIGNQLI 169 Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN----RL 388 +K+SS+ + +L ++ + +E L+ +YL L+ + + +N R+ Sbjct: 170 VNIKDSSMLNVITVTELYFQTTSVAGSNYRVMETFLVSAILYLILTTLASFLLNYLEKRM 229 Query: 389 NAKIALKE 396 +++ ++K+ Sbjct: 230 DSEGSMKD 237 >gi|126464335|ref|YP_001045448.1| polar amino acid ABC transporter, inner membrane subunit [Rhodobacter sphaeroides ATCC 17029] gi|126106146|gb|ABN78676.1| polar amino acid ABC transporter, inner membrane subunit [Rhodobacter sphaeroides ATCC 17029] Length = 370 Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 37/132 (28%), Positives = 74/132 (56%), Gaps = 3/132 (2%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 + + + + ++ + A + AE++R GL A+P GQ EAA +L L++ + TR ++LPQA+R + Sbjct: 235 KLLRITVGIAIFFACYQAEVIRGGLQAIPTGQYEAAASLSLSYWQTTRRIILPQALRISL 294 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA---IEIILIWMFIYLSLSIMI 381 P +T+ + +KN+S + +G D+++ ++ IE L +YL + Sbjct: 295 PAITNHIIAAMKNTSFVIIIGLFDILTATTAVMQDPLWRKFYIEAYLFVAAVYLFFGYAL 354 Query: 382 ALFMNRLNAKIA 393 +L+ ++ IA Sbjct: 355 SLYARQVEKWIA 366 >gi|330861764|emb|CBX71938.1| hypothetical protein YEW_AJ02050 [Yersinia enterocolitica W22703] Length = 186 Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 45/177 (25%), Positives = 88/177 (49%), Gaps = 10/177 (5%) Query: 177 SFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV 236 +FP + A + S + G+ ++ T L G +L +P ++ Sbjct: 17 TFPDGPLGGAALTLLISLLAGVASAILGTALGVALAMSRGVWAAVLAAVLGFFRAIPVIM 76 Query: 237 LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296 LI + +F P++ + PE ++ AL+ +A++A V++G++A+ GQ Sbjct: 77 LI---FWTYFLLPIVFGVDI-------PEITTVVCALALIASAYLAHAVKAGIVAIGAGQ 126 Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353 +A ++LG + V+LPQA+R ++P +Q+++L+K++SLA VG +L G Sbjct: 127 WQAGLSLGFNRWQVLWFVVLPQALRMMVPSFINQWISLIKDTSLAYIVGVNELTFFG 183 >gi|317404446|gb|EFV84860.1| polar amino acid ABC transporter [Achromobacter xylosoxidans C54] Length = 368 Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 39/126 (30%), Positives = 75/126 (59%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +AL +A+ +E R+G+ ++ +GQMEAA+A+G++ R+A VL+PQA R I+P L S Sbjct: 243 VALVLNVSAYNSETFRAGINSIRKGQMEAALAMGMSRRQAMFKVLVPQAARRILPVLAST 302 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 +++L K++SL + ++L + Q+ + +E++ IY + A ++ ++ Sbjct: 303 WISLFKDTSLVSVIAVSELAYASMQVRAQSFRVLEMLTAMAVIYWLMGYPQAKLVDWIHR 362 Query: 391 KIALKE 396 K +KE Sbjct: 363 KYGVKE 368 >gi|269216149|ref|ZP_06160003.1| amino acid ABC transporter, permease protein [Slackia exigua ATCC 700122] gi|269130408|gb|EEZ61486.1| amino acid ABC transporter, permease protein [Slackia exigua ATCC 700122] Length = 217 Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 51/166 (30%), Positives = 89/166 (53%), Gaps = 18/166 (10%) Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252 S LGIV++L R+SR P+ +I+ F I + L+ + ++F Sbjct: 28 SLPLGIVVAL--ARMSR--------IKPISWITKFYISIMRGTPLMLQMFAIYFAP---- 73 Query: 253 QFNFIGGSTVSP--EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 ++ G +SP +F + +A AA+ AEI RSG+ +VPRGQ EAA LG + + Sbjct: 74 --YYVFGIELSPGSKFTATIVAFVVNYAAYFAEIYRSGIQSVPRGQYEAAAVLGYSRAQT 131 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356 ++LPQ ++ I+P + ++ + L+K++SLA ++G ++ S I Sbjct: 132 FMKIVLPQVIKRILPAMGNEVVTLVKDTSLAFSIGVMEMFSSAKAI 177 Score = 36.6 bits (83), Expect = 7.1, Method: Compositional matrix adjust. Identities = 18/58 (31%), Positives = 33/58 (56%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 GFV T + F +I + +G +V R+S K ++WI + Y+ + R P ++ +F +Y Sbjct: 13 GFVITLEIFFLTLIGSLPLGIVVALARMSRIKPISWITKFYISIMRGTPLMLQMFAIY 70 >gi|134278595|ref|ZP_01765309.1| ABC polar amino acid family transporter, inner membrane subunit [Burkholderia pseudomallei 305] gi|134250379|gb|EBA50459.1| ABC polar amino acid family transporter, inner membrane subunit [Burkholderia pseudomallei 305] Length = 218 Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 45/168 (26%), Positives = 83/168 (49%), Gaps = 7/168 (4%) Query: 237 LIALKYQLHFDKPVLGQF--NFIG----GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290 ++ L +L P+L Q F G G VSP +++ + L+ YT A++A+I R + Sbjct: 52 IVILYVELFQGTPLLMQLFLGFFGLPLLGVDVSP-WVAATVTLTLYTGAYLADIWRGCVE 110 Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 AVP+GQ AA +LG+T + R V+ PQA + +PP + ++K+++L +G +L Sbjct: 111 AVPQGQWSAAASLGMTWTQQLRYVVWPQAWKIAVPPTVGFLVQVVKSTALTSIIGLTELT 170 Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 G I N + I + +Y ++ + + L + + + Sbjct: 171 KTGTMITNAAFRPFPIYAMVALLYFAMCFPLTWYARVLERRYHVGRHR 218 >gi|332107599|gb|EGJ08823.1| polar amino acid ABC transporter inner membrane subunit [Rubrivivax benzoatilyticus JA2] Length = 231 Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 36/86 (41%), Positives = 53/86 (61%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P +S+ ALS A++A V +G+ V GQ A +ALG T A R V+LPQA+R + Sbjct: 94 PGVLSVMAALSLVGGAYLAHAVAAGIRGVGAGQWAAGLALGFTRWGALRHVVLPQALRMM 153 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADL 349 +P +Q++ L+K+SSLA VG +L Sbjct: 154 LPSFVNQWVTLIKDSSLAYIVGVGEL 179 >gi|260223280|emb|CBA33684.1| General L-amino acid transport system permease protein aapM [Curvibacter putative symbiont of Hydra magnipapillata] Length = 367 Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 29/78 (37%), Positives = 54/78 (69%) Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 ++ + AA++AE++R GL AVP+GQ+EAA LGL++ + R ++LPQA+ ++P + + + Sbjct: 237 GITLFAAAYMAEVIRGGLQAVPKGQIEAAATLGLSYWQTQRKIVLPQALSMVVPGIMNNF 296 Query: 332 LNLLKNSSLAVAVGFADL 349 ++ K++SL V +L Sbjct: 297 ISTFKDTSLVTIVSLYEL 314 >gi|220910018|ref|YP_002485329.1| polar amino acid ABC transporter inner membrane subunit [Cyanothece sp. PCC 7425] gi|219866629|gb|ACL46968.1| polar amino acid ABC transporter, inner membrane subunit [Cyanothece sp. PCC 7425] Length = 341 Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 43/121 (35%), Positives = 68/121 (56%), Gaps = 3/121 (2%) Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 L + AA++AE VR GL +VPRGQ+EAA ALG L++LPQA+R++IP + Q+ Sbjct: 221 GLVLFNAAYLAENVRGGLQSVPRGQIEAAQALGFNIPLTLLLIVLPQALRTVIPAIVGQF 280 Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQT---GQAIEIILIWMFIYLSLSIMIALFMNRL 388 ++L+K++SL +L + +I+ Q G E+ L IY ++ + RL Sbjct: 281 ISLIKDTSLLSLFALLELTGIARSILAQPQFLGHYTEVYLFIGLIYWFFCFTLSHYSRRL 340 Query: 389 N 389 Sbjct: 341 E 341 >gi|331091628|ref|ZP_08340462.1| hypothetical protein HMPREF9477_01105 [Lachnospiraceae bacterium 2_1_46FAA] gi|330403385|gb|EGG82944.1| hypothetical protein HMPREF9477_01105 [Lachnospiraceae bacterium 2_1_46FAA] Length = 229 Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 45/165 (27%), Positives = 88/165 (53%), Gaps = 18/165 (10%) Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTG----KALPLLYISTFLIFGLPTLVLIALKYQL 244 I +F+ +G+ + L + EK K L +YI+ +I G P +V + + Y L Sbjct: 34 ISLFAIAIGVAIGLLIAVIKVSASEKKVLVGLKWLCNVYIT--VIRGTPVMVQLLIIYNL 91 Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304 F + + E + I + A++AEI+R+G+ ++ +GQMEA +LG Sbjct: 92 VFT------------ARDTNEIVVGAICFGINSGAYVAEIIRAGIESIDKGQMEAGRSLG 139 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349 + + R +++PQA+++I+P L+++++ L+K +S+A + DL Sbjct: 140 FNYIQTMRYIIVPQAIKNILPALSNEFIVLIKETSVAGIIAVTDL 184 >gi|257056914|ref|YP_003134746.1| amino acid ABC transporter membrane protein [Saccharomonospora viridis DSM 43017] gi|256586786|gb|ACU97919.1| amino acid ABC transporter membrane protein [Saccharomonospora viridis DSM 43017] Length = 241 Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 43/127 (33%), Positives = 70/127 (55%), Gaps = 2/127 (1%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +A A+ AE+VR L AVPR Q EAA+AL L+ + V+ PQA+ +IP + + Sbjct: 92 LAFGLNYGAYGAEVVRGSLEAVPRPQWEAAVALNLSPTQRMTRVVWPQAIALMIPSMNNL 151 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++ LLK++ L + DL+++G + G I L+ M IY L+ + L N A Sbjct: 152 FIQLLKSTPLLYTISLVDLMTMGESFHEAGGDRTLIYLVLMAIYFVLAYAVTLLSNM--A 209 Query: 391 KIALKEK 397 ++A+K + Sbjct: 210 EVAVKAR 216 >gi|239815857|ref|YP_002944767.1| polar amino acid ABC transporter inner membrane subunit [Variovorax paradoxus S110] gi|239802434|gb|ACS19501.1| polar amino acid ABC transporter, inner membrane subunit [Variovorax paradoxus S110] Length = 219 Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 38/126 (30%), Positives = 75/126 (59%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +AL +A+ AE R+G+ ++ +GQ+EAA+A+G++ R+A V++PQA R I+P + S Sbjct: 94 VALVLNISAYNAETFRAGINSIRKGQLEAALAMGMSRRQAMFKVVIPQAGRRILPVIAST 153 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 +++L K++SL + ++L I QT + +E++ +Y + A ++ ++ Sbjct: 154 WVSLFKDTSLVSVIAVSELAYTAMQIRAQTFRVLEMLTAMAVLYWLMGYPQAKLVDWIHR 213 Query: 391 KIALKE 396 K +KE Sbjct: 214 KYGVKE 219 >gi|254450652|ref|ZP_05064089.1| amino acid ABC transporter, permease protein [Octadecabacter antarcticus 238] gi|198265058|gb|EDY89328.1| amino acid ABC transporter, permease protein [Octadecabacter antarcticus 238] Length = 207 Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 52/170 (30%), Positives = 87/170 (51%), Gaps = 14/170 (8%) Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY----IALSCYTAAFIA 282 ++ G P LV I + Y + P Q FI + P F + +AL+ T A+++ Sbjct: 34 YIFRGTPILVQIFIVY---YGFP---QLEFIREGILWPIFRDPFGCAIVALTLNTGAYVS 87 Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342 EI+R G++ V RG +EA ALGL + + P A R +P + ++LLK+++L Sbjct: 88 EILRGGVLGVDRGILEAGEALGLNRCQRFTYLTTPIAARLALPAYGNDVISLLKSTALVS 147 Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 + AD+ + TI+ QT EI + +Y+ +I LF+ +L A+I Sbjct: 148 TITLADMTGIARTIVAQTYAPYEIFISLAIVYM----IITLFIQKLMARI 193 >gi|325278186|ref|ZP_08143685.1| amino acid ABC transporter, permease protein [Pseudomonas sp. TJI-51] gi|324096680|gb|EGB95027.1| amino acid ABC transporter, permease protein [Pseudomonas sp. TJI-51] Length = 239 Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 62/184 (33%), Positives = 94/184 (51%), Gaps = 23/184 (12%) Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTF--LIFGLP---TLVLIALKYQLHFDKPV 250 LG+V++L A ++ K LP + +TF + GLP TL++I Q+ K V Sbjct: 40 LGLVVALAA---------RSRKRLPRAWATTFSTVFRGLPELLTLLIIYYGCQIAAQK-V 89 Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 L + G ++ F++ IA S AAF +EI + +P+GQ EA ALGL+ R Sbjct: 90 LAALGYEGEFLIN-TFVAAMIAFSLVFAAFSSEIWLAAFKTLPKGQWEACSALGLSKRTG 148 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370 VLLPQ R +P L++ +L+LLK++SL + DL + QT A+ + Sbjct: 149 FFKVLLPQLTRIALPGLSNNWLSLLKDTSLVSTISLVDL-------MRQTNLAVSVTKEP 201 Query: 371 MFIY 374 MF Y Sbjct: 202 MFFY 205 >gi|169826265|ref|YP_001696423.1| amino-acid ABC transporter permease [Lysinibacillus sphaericus C3-41] gi|168990753|gb|ACA38293.1| Probable amino-acid ABC transporter permease protein [Lysinibacillus sphaericus C3-41] Length = 227 Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 35/119 (29%), Positives = 72/119 (60%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IA + A+I+EI+R+G+ AV +GQMEAA ALG+ + K + +++PQA+++I+P L ++ Sbjct: 102 IAFGLNSGAYISEIIRAGINAVDKGQMEAAQALGIPYAKMMKDIIIPQAVKNILPSLVNE 161 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 ++ L K +++ + D++ + T + +E +L IY +++++ R+ Sbjct: 162 FITLNKETAVVTVISALDIMRRAYIVGGSTYRYLEPLLFAGIIYYLMTLVLTFLGKRIE 220 >gi|152981388|ref|YP_001351724.1| ABC-type amino acid transport system, permease component [Janthinobacterium sp. Marseille] gi|151281465|gb|ABR89875.1| ABC-type amino acid transport system, permease component [Janthinobacterium sp. Marseille] Length = 218 Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 32/97 (32%), Positives = 58/97 (59%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P +++ + L+ ++A+F+AEI R + A+PRGQ EA+ L + + + R V+LPQA+R Sbjct: 84 PAWLAAGLTLTLWSASFLAEIWRGCVEAIPRGQWEASSVLAMNYVQQMRYVILPQALRIA 143 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 +PP + ++K +++ +GF +L I N T Sbjct: 144 LPPTIGFSVQIIKGTAVTSIIGFVELSKAATVITNAT 180 >gi|161521797|ref|YP_001585224.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia multivorans ATCC 17616] gi|189352041|ref|YP_001947668.1| polar amino acid transport system permease protein [Burkholderia multivorans ATCC 17616] gi|160345847|gb|ABX18932.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia multivorans ATCC 17616] gi|189336063|dbj|BAG45132.1| polar amino acid transport system permease protein [Burkholderia multivorans ATCC 17616] Length = 223 Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 41/112 (36%), Positives = 66/112 (58%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +AL AF AE R+G+ AVP+ ++AA+ALGL + T V+LPQA+R+ +P L + Sbjct: 96 LALGLNLTAFNAEAYRAGVQAVPKEHLDAAVALGLRPWQRTIFVVLPQALRNAMPVLLTN 155 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382 + L+ S+L V ADL+ V ++ Q + +E + +Y +LS+ IA Sbjct: 156 GIGSLQQSALVAIVAVADLMYVAKSLATQAYRPLETYSVVALVYFALSLPIA 207 >gi|118475743|ref|YP_891955.1| amino-acid ABC transporter permease protein YckJ [Campylobacter fetus subsp. fetus 82-40] gi|118414969|gb|ABK83389.1| probable amino-acid ABC transporter permease protein YckJ [Campylobacter fetus subsp. fetus 82-40] Length = 210 Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 60/213 (28%), Positives = 109/213 (51%), Gaps = 25/213 (11%) Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249 F+ +GI+++L S++ K + YIS +I G P LV + + + + P Sbjct: 17 FILGISIGIMVALIRIDSSKNLLTTILKYICAFYIS--IIRGTPLLVQL---FIIFYGLP 71 Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309 +G T++P F+S IA S A+ +E +R+ ++AVP+GQ EA ++G+ + Sbjct: 72 NIG-------ITLNP-FISSIIAFSLNIGAYSSETIRASILAVPKGQWEAGWSIGMNNFD 123 Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI----E 365 ++ PQA + +P L++ +++L+K+SSLA V A+L TI +Q + + E Sbjct: 124 TFTKIIAPQAFKIALPTLSNTFISLVKDSSLASVVLVAELFREAQTIASQNYEFLLTYSE 183 Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 LI+ +I +F+ L K+ +K K Sbjct: 184 AALIYW--------VICIFLGYLQTKLEIKFSK 208 >gi|229588842|ref|YP_002870961.1| histidine ABC transporter permease [Pseudomonas fluorescens SBW25] gi|229360708|emb|CAY47566.1| histidine ABC transport system, permease protein [Pseudomonas fluorescens SBW25] Length = 242 Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 51/174 (29%), Positives = 84/174 (48%), Gaps = 2/174 (1%) Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE-FMSLYIALSCYTAAFIAEI 284 T LI G+P LVL+ L + + G +F+ + + F + I L A+ E Sbjct: 67 TTLIRGVPDLVLMLLIFY-SLQTWLTGLTDFMEWEYIEIDPFSAGVITLGFIYGAYFTET 125 Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344 R ++AVPRGQ+EAA A GL + R V PQ MR +P + + ++ +LK ++L + Sbjct: 126 FRGAILAVPRGQLEAATAYGLKRGQRFRYVTFPQMMRFALPGIGNNWMVMLKATALVSII 185 Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 G ADLV T Q +++ IYL ++ + RL + + ++ Sbjct: 186 GLADLVKAAQDAGKSTYQLFYFLVLAALIYLLITSASNFVLRRLERRYSAGSRE 239 >gi|302522278|ref|ZP_07274620.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces sp. SPB78] gi|302431173|gb|EFL02989.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces sp. SPB78] Length = 300 Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 45/163 (27%), Positives = 92/163 (56%), Gaps = 16/163 (9%) Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249 V + LG V + RLS H + A + + + +P L+++ + Y ++ Sbjct: 79 MVIALPLGAVFGI--ARLSDHVWVRVPSATVVEFFRS-----IPVLIMMIVAYAVY---- 127 Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309 Q+ + ST ++ L Y A+ +AEIVR+G++++P+GQ EAA A+GL + Sbjct: 128 --AQYTSV--STDDRPLYAVVTGLVLYNASVLAEIVRAGILSLPKGQTEAAQAIGLRKGQ 183 Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV-GFADLVS 351 R +LLPQ++ +++P + SQ + ++K++++ ++ GF++L++ Sbjct: 184 TMRSILLPQSVTAMLPAIVSQLVVIVKDTAIGGSILGFSELIN 226 >gi|303247500|ref|ZP_07333772.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio fructosovorans JJ] gi|302491196|gb|EFL51088.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio fructosovorans JJ] Length = 230 Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 44/140 (31%), Positives = 78/140 (55%), Gaps = 3/140 (2%) Query: 257 IGG--STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLV 314 IGG +SP + S+ I + + A+ +E +R GL+++ RGQ+ AA ALG+T V Sbjct: 84 IGGWRCILSPMWASI-IGFALCSGAYQSEYIRGGLLSIKRGQLRAAQALGMTPFTTITSV 142 Query: 315 LLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374 +LPQA R +P ++ + L+K SSLA + +DL +G ++ T + E+ ++ Y Sbjct: 143 VLPQAFRRALPGCGNEIIYLIKYSSLASIITVSDLTGMGRSLAKATFRNTEVFVVVGVYY 202 Query: 375 LSLSIMIALFMNRLNAKIAL 394 L+L + L + + ++ L Sbjct: 203 LALVTVATLVLRSVEKRLEL 222 >gi|294632492|ref|ZP_06711052.1| amino acid ABC transporter, permease [Streptomyces sp. e14] gi|292835825|gb|EFF94174.1| amino acid ABC transporter, permease [Streptomyces sp. e14] Length = 333 Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 44/129 (34%), Positives = 70/129 (54%), Gaps = 4/129 (3%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + LS AA+ AE+VR G+++V +GQ EAA ALGL ++LPQA+RSI+P +Q Sbjct: 178 VGLSLNEAAYAAEVVRGGVLSVDQGQHEAAAALGLPRGYRFTRIVLPQALRSIVPNYVNQ 237 Query: 331 YLNLLKNSSLAVAVGFADLV----SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386 + L+K +SL V DL ++G T + ++ +W I SL + ++ Sbjct: 238 LIGLVKATSLVFYVSLLDLFGTAQTMGSTYPGDIVPLLLVVTVWYLILTSLFSVAQFYVE 297 Query: 387 RLNAKIALK 395 R A+ A + Sbjct: 298 RHYARGATR 306 >gi|91780197|ref|YP_555404.1| polar amino acid ABC transporter inner membrane protein [Burkholderia xenovorans LB400] gi|91692857|gb|ABE36054.1| amino acid ABC transporter membrane protein 2, PAAT family [Burkholderia xenovorans LB400] Length = 231 Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 47/137 (34%), Positives = 77/137 (56%), Gaps = 19/137 (13%) Query: 224 ISTFLIFGLPTLVLIA------------LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYI 271 +S + GLP L+L+A L + F PVL + G +TV Sbjct: 49 VSLVMTRGLPHLLLLAVVGLFRAIPVLMLIFWTFFLMPVLLHVDVPGLATV-------VC 101 Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 AL+ A+++ V++G++AV GQ +AA +LG+T +A R VLLPQA+R++ P +Q+ Sbjct: 102 ALALIGGAYLSHSVQAGIVAVGDGQWQAAQSLGMTRGQALRHVLLPQAIRTMTPSFVNQW 161 Query: 332 LNLLKNSSLAVAVGFAD 348 ++L+K++SLA VG + Sbjct: 162 VSLIKDTSLAYIVGVPE 178 >gi|304396807|ref|ZP_07378687.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea sp. aB] gi|304355603|gb|EFM19970.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea sp. aB] Length = 216 Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 59/177 (33%), Positives = 95/177 (53%), Gaps = 17/177 (9%) Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281 LYIS L+ G P +V + + + F P LG +GG + ++ IA+ + A++ Sbjct: 56 LYIS--LMRGTPAIVQL---FVVFFTLPRLG----LGGHPM----LAAVIAIGFNSGAYV 102 Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341 AEI+R V RGQ EAA LGL+ V+ PQ +RS +P L S++ LLK + LA Sbjct: 103 AEILRVNQSLVTRGQREAARTLGLSRWLTWWYVINPQVVRSSLPMLVSEFTILLKTTPLA 162 Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 V +L G +I +T +A +++L+ YL +IAL + R+ ++ L+ K+ Sbjct: 163 SVVALTELTYAGQIVIARTYEATQVLLLVAAGYL----LIALPLMRIARRLELRGKR 215 >gi|323529860|ref|YP_004232012.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia sp. CCGE1001] gi|323386862|gb|ADX58952.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. CCGE1001] Length = 216 Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 46/128 (35%), Positives = 71/128 (55%), Gaps = 1/128 (0%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G VSP ++ A+S +A++IAEI+R G +++P G +EAA LGL+ R +L+PQ Sbjct: 81 GINVSP-LVAAVSAVSLCSASYIAEILRGGFLSIPPGHIEAARMLGLSPFDTLRRILVPQ 139 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378 A R +P L ++ + L+K SSL VG A+L I T + +E L IY + Sbjct: 140 AFRLTLPSLVNEMVLLIKASSLISVVGVAELTRTAQNIAASTYRPLEAYLAAGLIYFVIC 199 Query: 379 IMIALFMN 386 +AL + Sbjct: 200 GALALIAH 207 >gi|256847978|ref|ZP_05553422.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Lactobacillus coleohominis 101-4-CHN] gi|256715038|gb|EEU30015.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Lactobacillus coleohominis 101-4-CHN] Length = 215 Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 45/158 (28%), Positives = 78/158 (49%), Gaps = 24/158 (15%) Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFN 255 LG+V + + F+ + PLL F+ +GLP ++ + +Q FD + Sbjct: 40 LGLVSKIRPLKWVLEFYVWLMRGTPLLLQLIFVFYGLP---IVGIVFQ-RFDAAL----- 90 Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315 +A AA+ AEI R GL ++ GQ E A LGL++ + R ++ Sbjct: 91 ---------------VAFILNYAAYFAEIFRGGLQSIDEGQYEGARVLGLSYWQTVRKIV 135 Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353 +PQ ++ +IP + ++ +NL+K+SSL +G DL+ G Sbjct: 136 IPQVVKIVIPSIGNEVVNLVKDSSLVYVIGLGDLLRAG 173 >gi|227112141|ref|ZP_03825797.1| octopine transport system permease protein [Pectobacterium carotovorum subsp. brasiliensis PBR1692] gi|227326810|ref|ZP_03830834.1| octopine transport system permease protein [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 244 Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 48/163 (29%), Positives = 94/163 (57%), Gaps = 14/163 (8%) Query: 226 TFLIF--GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV-----SPEFMSLYIALSCYTA 278 T+++F G P LV + L Y LGQF ++ S + P + +L ++LS T Sbjct: 55 TYVLFFRGTPLLVQLFLIYY------GLGQFTWVRESMLWPFLREPHWCAL-LSLSLCTG 107 Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338 A+ +EI+R GL +VP GQ+E+A A G+ + ++ P A+R +P ++ ++++K++ Sbjct: 108 AYASEIIRGGLQSVPVGQIESARACGMPSFMIFKRIVFPLAIRQALPAYGNELISMVKST 167 Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 SLA + ++ + +I +T +A+E+ L+ IYL +++++ Sbjct: 168 SLASIITLMEITGIAARLIAETYRALEVFLVAGAIYLFINLIL 210 >gi|291301453|ref|YP_003512731.1| polar amino acid ABC transporter inner membrane subunit [Stackebrandtia nassauensis DSM 44728] gi|290570673|gb|ADD43638.1| polar amino acid ABC transporter, inner membrane subunit [Stackebrandtia nassauensis DSM 44728] Length = 310 Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 33/80 (41%), Positives = 55/80 (68%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I LS Y A +AEI+RSG+ A+P GQ A A+GL H + R +++PQA+R+++P + +Q Sbjct: 153 IGLSIYNGAVLAEILRSGINALPPGQAMAGHAVGLRHGQVMRSIVMPQAIRNMLPAVLAQ 212 Query: 331 YLNLLKNSSLAVAVGFADLV 350 + L K++SL A+ + +L+ Sbjct: 213 LIILFKDTSLGYAITYPELL 232 Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust. Identities = 26/58 (44%), Positives = 36/58 (62%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 G + T AF G I A +IG +VG GR+S K + I VYV+ FR+IP L++I+ Y Sbjct: 70 GLLGTLRAAFFGCIGALVIGVIVGMGRVSRFKFIRAISAVYVQFFRSIPLLLLIWIPY 127 >gi|154244133|ref|YP_001415091.1| polar amino acid ABC transporter, inner membrane subunit [Xanthobacter autotrophicus Py2] gi|154158218|gb|ABS65434.1| polar amino acid ABC transporter, inner membrane subunit [Xanthobacter autotrophicus Py2] Length = 217 Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 43/141 (30%), Positives = 71/141 (50%) Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316 I G P ++ + L+ Y++ F+AEI R + +VP+ Q EAA L L+ + V+L Sbjct: 77 IAGFKEVPAILAAGLGLTIYSSGFLAEIWRGCIESVPKTQWEAAECLSLSRWQRLTRVIL 136 Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376 PQAMR P + ++KN+SLA VGF +L G + N + I ++ IY Sbjct: 137 PQAMRIATAPTVGFLVQIVKNTSLASVVGFVELSQAGKLVNNSIFEPFTIFMVVAAIYFV 196 Query: 377 LSIMIALFMNRLNAKIALKEK 397 L ++ + L K+ + + Sbjct: 197 LCYPLSTWSRSLERKLNVGRR 217 >gi|311106550|ref|YP_003979403.1| glutamine transporter permease GlnP [Achromobacter xylosoxidans A8] gi|310761239|gb|ADP16688.1| glutamine transport system permease protein GlnP [Achromobacter xylosoxidans A8] Length = 198 Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 55/186 (29%), Positives = 98/186 (52%), Gaps = 12/186 (6%) Query: 207 LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF 266 ++R + A+ +Y++ +I G P +V + Y F P+L V E+ Sbjct: 22 VTRAYGHPVLSAIAQVYVA--VIRGTPIVVQVMFIY---FALPLLANIR------VDAEW 70 Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326 ++ + L + A+I+EIVR L++V +G EA A+GL K ++ P A R +IPP Sbjct: 71 AAI-VTLIINSGAYISEIVRGALLSVHKGLKEAGQAMGLPFHKILLHIIGPVAFRRMIPP 129 Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386 L +Q + LK+SSL + +G A+L G I+ +A+EI +YL L+ ++AL ++ Sbjct: 130 LGNQCIISLKDSSLFIVIGVAELTRQGQEIMASNFRAVEIWSAVAIVYLILTGLMALALH 189 Query: 387 RLNAKI 392 + ++ Sbjct: 190 LVERRM 195 >gi|299541711|ref|ZP_07052041.1| amino-acid ABC transporter permease protein [Lysinibacillus fusiformis ZC1] gi|298725806|gb|EFI66440.1| amino-acid ABC transporter permease protein [Lysinibacillus fusiformis ZC1] Length = 219 Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 35/119 (29%), Positives = 72/119 (60%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IA + A+I+EI+R+G+ AV +GQMEAA ALG+ + K + +++PQA+++I+P L ++ Sbjct: 94 IAFGLNSGAYISEIIRAGINAVDKGQMEAAQALGIPYAKMMKDIIIPQAVKNILPSLVNE 153 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 ++ L K +++ + D++ + T + +E +L IY +++++ R+ Sbjct: 154 FITLNKETAVVTVISALDIMRRAYIVGGSTYRYLEPLLFAGVIYYIMTLVLTFLGKRIE 212 >gi|300721603|ref|YP_003710878.1| putative amino acid ABC transporter membrane protein [Xenorhabdus nematophila ATCC 19061] gi|297628095|emb|CBJ88646.1| putative amino acid transport protein (ABC superfamily, membrane) [Xenorhabdus nematophila ATCC 19061] Length = 238 Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 50/157 (31%), Positives = 87/157 (55%), Gaps = 14/157 (8%) Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252 +F LGI L F L R + K A+ Y+ +LI G P LV + L + + P +G Sbjct: 31 TFALGISLG-FIVALIRLYGPKPLIAVVRFYV--WLIRGTPLLVQLFLIF---YALPSVG 84 Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312 F S I + A+ +E++R+ LI+VP+GQ EA+ ++G++ ++ R Sbjct: 85 --------ITLEAFTSAVIGFTLNVGAYTSEVIRAALISVPKGQWEASHSIGMSWWQSLR 136 Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349 ++LPQA R IPPL++ +++L+K++SLA + ++ Sbjct: 137 RIVLPQAARFSIPPLSNTFISLVKDTSLASVITVPEM 173 >gi|298290389|ref|YP_003692328.1| polar amino acid ABC transporter inner membrane subunit [Starkeya novella DSM 506] gi|296926900|gb|ADH87709.1| polar amino acid ABC transporter, inner membrane subunit [Starkeya novella DSM 506] Length = 541 Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 38/79 (48%), Positives = 53/79 (67%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +AL+ A FIAEI+RS +I V RGQ+ A ALG+T R V+ PQA+RS++P L ++ Sbjct: 91 LALALNEAPFIAEILRSNVIGVDRGQVSAGQALGMTPAAIMRRVIAPQAIRSMVPALGNE 150 Query: 331 YLNLLKNSSLAVAVGFADL 349 ++ LKNSSLA V +L Sbjct: 151 AVSALKNSSLASVVAVQEL 169 >gi|221197498|ref|ZP_03570545.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia multivorans CGD2M] gi|221204171|ref|ZP_03577189.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia multivorans CGD2] gi|221176337|gb|EEE08766.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia multivorans CGD2] gi|221184052|gb|EEE16452.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia multivorans CGD2M] Length = 223 Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 41/112 (36%), Positives = 66/112 (58%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +AL AF AE R+G+ AVP+ ++AA+ALGL + T V+LPQA+R+ +P L + Sbjct: 96 LALGLNLTAFNAEAYRAGVQAVPKEHLDAAVALGLRPWQRTIFVVLPQALRNAMPVLLTN 155 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382 + L+ S+L V ADL+ V ++ Q + +E + +Y +LS+ IA Sbjct: 156 GIGSLQQSALVAIVAVADLMYVAKSLATQAYRPLETYSVVALVYFALSLPIA 207 >gi|83720853|ref|YP_442092.1| His/Glu/Gln/Arg/opine ABC transporter permease [Burkholderia thailandensis E264] gi|257138278|ref|ZP_05586540.1| His/Glu/Gln/Arg/opine ABC transporter permease [Burkholderia thailandensis E264] gi|83654678|gb|ABC38741.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Burkholderia thailandensis E264] Length = 219 Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 57/211 (27%), Positives = 106/211 (50%), Gaps = 14/211 (6%) Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247 K V S VLG+++ L + R + + A+ Y+S L+ G P LV + + +++ Sbjct: 23 KFAVASMVLGLIVGLVVA-IVRIGNNRFLSAIAQGYVS--LMRGTPLLVQM---FVVYYG 76 Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307 P +G ++ P ++ L+ A+++E +R ++ + RGQ A+ +LGLTH Sbjct: 77 LPDIG-------ISLDPTSAGIF-TLTLNAGAYLSESMRGAILGIGRGQWAASHSLGLTH 128 Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367 + R V+ PQA+R +P L + ++L+K++SL + +L+ +I T Q + + Sbjct: 129 AQTLRYVICPQALRLAVPSLGNTLISLIKDTSLVSVITVTELLRSTQEVIASTFQPLPLY 188 Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 L IY LS ++A R+ + AL Sbjct: 189 LAAAAIYWVLSTLLARLQGRIETRCALPSTH 219 >gi|226363678|ref|YP_002781460.1| ABC transporter permease protein [Rhodococcus opacus B4] gi|226242167|dbj|BAH52515.1| putative ABC transporter permease protein [Rhodococcus opacus B4] Length = 243 Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 41/121 (33%), Positives = 64/121 (52%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +AL A+ AE+VR + +VP+ Q EAA AL +H + R V+ PQA +IPPLT+ Sbjct: 93 LALGLNYGAYGAEVVRGAINSVPQSQWEAATALDFSHWQRLRRVVFPQAWAEMIPPLTNL 152 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 + LLK ++LA + DL + TG + + + IY + ++ L MN L Sbjct: 153 LIQLLKGTALASYILLQDLTFEIDQLRQTTGNTLFAFGVGLVIYFVIGYVLTLLMNALEV 212 Query: 391 K 391 + Sbjct: 213 R 213 >gi|186472702|ref|YP_001860044.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC [Burkholderia phymatum STM815] gi|184195034|gb|ACC72998.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC [Burkholderia phymatum STM815] Length = 223 Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 39/123 (31%), Positives = 67/123 (54%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + L + A+ +EI+R L +VP GQ EAA+AL ++ R ++LPQAM + +PP T+ Sbjct: 88 VGLGLHYGAYGSEILRGALRSVPGGQFEAAVALNMSAFTRMRRIVLPQAMINALPPATNL 147 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 + LLK +SL + +DL + T + EI + + IY L+ ++A M Sbjct: 148 MIELLKGTSLVSLITLSDLTFRARQLDEATFKTAEIFCLTLIIYFVLAQLLATLMRHFER 207 Query: 391 KIA 393 +++ Sbjct: 208 RVS 210 Score = 37.0 bits (84), Expect = 5.6, Method: Compositional matrix adjust. Identities = 30/91 (32%), Positives = 46/91 (50%), Gaps = 5/91 (5%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G + T +A G + A + + A +L+ V W+ VYVEVFR LV +F+ Sbjct: 8 LLQGTIVTIEIAAFGTLLAIAMAFVATAAKLAPWAPVRWVGNVYVEVFRGTSLLVQLFWF 67 Query: 149 YKSVLSVLPIPDHSIVL-PFGMFLNNRGLSF 178 + VLP+P I L PF + + GL + Sbjct: 68 F----FVLPLPPFRIELTPFTVAIVGLGLHY 94 >gi|309779094|ref|ZP_07673861.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Ralstonia sp. 5_7_47FAA] gi|308922159|gb|EFP67789.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Ralstonia sp. 5_7_47FAA] Length = 233 Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 38/86 (44%), Positives = 55/86 (63%), Gaps = 3/86 (3%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 EF++ ++ Y AF +E +R+G+ AVPR EAA++LG T R A V+LPQA+R Sbjct: 95 EFLAATFGIALYAGAFFSEELRAGIRAVPR---EAALSLGFTPRAAFLRVVLPQALRVSA 151 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLV 350 PL Q N +KN+SLA+ +G A+L Sbjct: 152 LPLLGQCANTIKNTSLAMGIGLAELA 177 >gi|237799755|ref|ZP_04588216.1| amino acid ABC transporter permease [Pseudomonas syringae pv. oryzae str. 1_6] gi|331022610|gb|EGI02667.1| amino acid ABC transporter permease [Pseudomonas syringae pv. oryzae str. 1_6] Length = 277 Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 47/123 (38%), Positives = 76/123 (61%) Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326 M+ IALS A+++EI R+G+I V GQ EAA+AL L + V LPQAMR+IIPP Sbjct: 144 MAGVIALSLNYGAYLSEIFRAGIIGVAAGQREAALALALRPAQIFWRVTLPQAMRTIIPP 203 Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386 T+Q++++LK+SSL +G +++ + + + + IE++ +Y +SI + L + Sbjct: 204 TTNQFISMLKDSSLISVMGVWEVMFLAQSYGRSSYRYIEMLTTAAVLYWIMSIGLELLQS 263 Query: 387 RLN 389 RL Sbjct: 264 RLE 266 >gi|312278333|gb|ADQ62990.1| L-cystine transport system permease protein TcyB [Streptococcus thermophilus ND03] Length = 190 Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 46/164 (28%), Positives = 85/164 (51%), Gaps = 11/164 (6%) Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290 G+P LV++ + L+F P +G P + I S +AA++AEI RS + Sbjct: 37 GVPMLVVL---FILYFGLPYVG--------IQIPTLLCAIIGFSTVSAAYMAEIFRSSIS 85 Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 AV +GQ +AA +LGL + ++LPQA+R + P + ++++K+SSLA + D+ Sbjct: 86 AVDKGQWKAAQSLGLPQKPIIHHIILPQALRIAVAPTCNVIIDMVKSSSLAAMITVPDIF 145 Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394 I + + + ++ FIY LS ++ L ++ ++ + Sbjct: 146 QNAKIIGGREYDYMSMYILITFIYWVLSFILELLQGQVEKRLTV 189 >gi|238894936|ref|YP_002919670.1| amino acid ABC transport system permease component [Klebsiella pneumoniae NTUH-K2044] gi|238547252|dbj|BAH63603.1| amino acid ABC transport system permease component [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] Length = 308 Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 37/134 (27%), Positives = 76/134 (56%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 +F + + L+ +A+ AEI+R G + V GQ EAA ALGL + T ++LPQA+R+I+ Sbjct: 146 QFSTAVVGLTLVQSAYTAEIIRGGFLGVDHGQYEAAAALGLPAWRRTLRIILPQALRTIL 205 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 P ++ ++L K +++ + +L I N+T + I ++++ YL+++ +++ Sbjct: 206 PSGFNEIISLAKGTAMVYVLAMPELFYTIQMIYNRTQEVIPLLMVGAAWYLAITSVLSAI 265 Query: 385 MNRLNAKIALKEKK 398 + +A E++ Sbjct: 266 QYLVERGLARSERR 279 >gi|295836169|ref|ZP_06823102.1| glutamate permease [Streptomyces sp. SPB74] gi|197695266|gb|EDY42199.1| glutamate permease [Streptomyces sp. SPB74] Length = 301 Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 45/162 (27%), Positives = 93/162 (57%), Gaps = 16/162 (9%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 V + LG + + RLS H + +P + F +P L+++ + Y+++ Sbjct: 80 VIALPLGAIFGI--ARLSDHAWVR----VPAATVVEFF-RSIPVLIMMIVAYEVY----- 127 Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 Q+ + ST ++ L Y A+ +AEIVR+G++++P+GQ EAA A+GL + Sbjct: 128 -AQYTSV--STDDRPLYAVVTGLVLYNASVLAEIVRAGILSLPKGQTEAAQAIGLRKGQI 184 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV-GFADLVS 351 R +LLPQ++ +++P + SQ + ++K++++ ++ GF++L++ Sbjct: 185 MRSILLPQSVTAMLPAIVSQLVVIVKDTAIGGSILGFSELIN 226 >gi|17549795|ref|NP_523135.1| amino-acid transmembrane ABC transporter protein [Ralstonia solanacearum GMI1000] gi|17432050|emb|CAD18727.1| probable amino-acid transmembrane abc transporter protein [Ralstonia solanacearum GMI1000] Length = 226 Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 54/162 (33%), Positives = 85/162 (52%), Gaps = 15/162 (9%) Query: 205 TRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP 264 RLSR+ + + + + ++S I G P L+ + L Y + P+LG ++SP Sbjct: 46 ARLSRY---RLLRGMVMAWVSA--IRGTPALIHMLLAY--YVVPPLLGL-------SISP 91 Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 + AL+C T+A++ EI+R L +VP Q AA ALG+ + R VLLPQ I Sbjct: 92 LAAGIG-ALACNTSAYLVEILRGALSSVPDAQRAAAQALGMREPQVWRHVLLPQVFYRAI 150 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 PPLTS++ LLK SSL + +L +V Q+ +++ Sbjct: 151 PPLTSEFTILLKASSLMSIIAVPELATVARNASLQSDLPLQV 192 >gi|225870676|ref|YP_002746623.1| transport system membrane protein [Streptococcus equi subsp. equi 4047] gi|225700080|emb|CAW94151.1| transport system membrane protein [Streptococcus equi subsp. equi 4047] Length = 217 Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 39/125 (31%), Positives = 70/125 (56%) Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329 Y+ S +AA+I+E+ R+ + A+ +GQ EAA ALGL + + V+LPQA R IPPL + Sbjct: 91 YLGFSLVSAAYISEVFRASIDAIDQGQWEAARALGLPYVSIVKHVILPQAFRIAIPPLGN 150 Query: 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 ++++K+SSLA + D+ I + + + ++ FIY ++ ++ L Sbjct: 151 VVIDMVKSSSLAAMITVPDIFQKAKIIGGREWDYMSMYILVAFIYWVIAFLLERCQGFLE 210 Query: 390 AKIAL 394 ++ L Sbjct: 211 KRLRL 215 >gi|206576764|ref|YP_002238287.1| amino acid ABC transporter, permease protein [Klebsiella pneumoniae 342] gi|288935273|ref|YP_003439332.1| polar amino acid ABC transporter inner membrane subunit [Klebsiella variicola At-22] gi|290509327|ref|ZP_06548698.1| amino acid ABC transporter, permease [Klebsiella sp. 1_1_55] gi|206565822|gb|ACI07598.1| amino acid ABC transporter, permease protein [Klebsiella pneumoniae 342] gi|288889982|gb|ADC58300.1| polar amino acid ABC transporter, inner membrane subunit [Klebsiella variicola At-22] gi|289778721|gb|EFD86718.1| amino acid ABC transporter, permease [Klebsiella sp. 1_1_55] Length = 308 Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 37/134 (27%), Positives = 76/134 (56%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 +F + + L+ +A+ AEI+R G + V GQ EAA ALGL + T ++LPQA+R+I+ Sbjct: 146 QFSTAVVGLTLVQSAYTAEIIRGGFLGVDHGQYEAAAALGLPAWRRTLRIILPQALRTIL 205 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 P ++ ++L K +++ + +L I N+T + I ++++ YL+++ +++ Sbjct: 206 PSGFNEIISLAKGTAMVYVLAMPELFYTIQMIYNRTQEVIPLLMVGAAWYLAITSVLSAI 265 Query: 385 MNRLNAKIALKEKK 398 + +A E++ Sbjct: 266 QYLVERALARSERR 279 >gi|254437975|ref|ZP_05051469.1| ABC transporter, permease protein, putative [Octadecabacter antarcticus 307] gi|198253421|gb|EDY77735.1| ABC transporter, permease protein, putative [Octadecabacter antarcticus 307] Length = 222 Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 45/123 (36%), Positives = 73/123 (59%), Gaps = 11/123 (8%) Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286 + I G PTL+ I + ++F P LG +G ++P +++ +AL A++AEI+R Sbjct: 63 WFIRGTPTLIQI---FMIYFGLPQLG----LG---LNP-YVAGILALGLSGGAYVAEILR 111 Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346 SG A+P GQ EA +LGL V+LPQ +R ++P LT++ +N LKN+SL A+ Sbjct: 112 SGFNAIPNGQFEAGRSLGLPTWAILWFVVLPQLLRIVVPALTNEAMNTLKNTSLLSAITI 171 Query: 347 ADL 349 ++ Sbjct: 172 VEI 174 >gi|50123003|ref|YP_052170.1| octopine transport system permease [Pectobacterium atrosepticum SCRI1043] gi|49613529|emb|CAG76980.1| octopine transport system permease protein [Pectobacterium atrosepticum SCRI1043] Length = 244 Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 48/163 (29%), Positives = 95/163 (58%), Gaps = 14/163 (8%) Query: 226 TFLIF--GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV-----SPEFMSLYIALSCYTA 278 T+++F G P LV + L Y LGQF ++ S + P++ +L ++LS T Sbjct: 55 TYVLFFRGTPLLVQLFLIYY------GLGQFPWVRESILWPFLREPQWCAL-LSLSLCTG 107 Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338 A+ +EI+R GL +VP GQ+E+A A G+ + ++ P A+R +P ++ ++++K++ Sbjct: 108 AYASEIIRGGLQSVPVGQIESARACGMPSFMIFKRIVFPLAIRQALPAYGNELISMVKST 167 Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 SLA + ++ + +I +T +A+E+ L+ IYL +++++ Sbjct: 168 SLASIITLMEITGIAARLIAETYRALEVFLVAGAIYLFINLIL 210 >gi|21224121|ref|NP_629900.1| glutamate permease [Streptomyces coelicolor A3(2)] gi|289768688|ref|ZP_06528066.1| glutamate permease [Streptomyces lividans TK24] gi|2687340|emb|CAA15881.1| glutamate permease [Streptomyces coelicolor A3(2)] gi|289698887|gb|EFD66316.1| glutamate permease [Streptomyces lividans TK24] Length = 222 Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 49/139 (35%), Positives = 80/139 (57%) Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317 G S + F + L YT+AF+ E +RSG+ VP GQ EAA A+GL+ + RLV+LP Sbjct: 84 GDSFETINFRLAVLGLVLYTSAFVCEALRSGINTVPVGQAEAARAIGLSFGQVLRLVVLP 143 Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377 QA RS + PL + + L+KN+++A A+G A+ ++ +I Q + I I ++ L Sbjct: 144 QAFRSTVGPLANVLIALIKNTTVAAAIGVAEAAALMKDMIENEAQLLLISAIIAVGFVIL 203 Query: 378 SIMIALFMNRLNAKIALKE 396 ++ L + + K+A+K Sbjct: 204 TLPTGLILGWVGKKVAVKR 222 >gi|126454206|ref|YP_001067296.1| polar amino acid ABC transporter permease [Burkholderia pseudomallei 1106a] gi|167825402|ref|ZP_02456873.1| polar amino acid uptake ABC transporter, PAAT family, permease protein [Burkholderia pseudomallei 9] gi|226193854|ref|ZP_03789456.1| polar amino acid uptake ABC transporter, PAAT family, permease protein [Burkholderia pseudomallei Pakistan 9] gi|237813419|ref|YP_002897870.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Burkholderia pseudomallei MSHR346] gi|242317625|ref|ZP_04816641.1| polar amino acid uptake ABC transporter, PAAT family, permease protein [Burkholderia pseudomallei 1106b] gi|254191836|ref|ZP_04898339.1| polar amino acid uptake ABC transporter, PAAT family, permease protein [Burkholderia pseudomallei Pasteur 52237] gi|126227848|gb|ABN91388.1| polar amino acid uptake ABC transporter, PAAT family, permease protein [Burkholderia pseudomallei 1106a] gi|157939507|gb|EDO95177.1| polar amino acid uptake ABC transporter, PAAT family, permease protein [Burkholderia pseudomallei Pasteur 52237] gi|225934159|gb|EEH30144.1| polar amino acid uptake ABC transporter, PAAT family, permease protein [Burkholderia pseudomallei Pakistan 9] gi|237506596|gb|ACQ98914.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Burkholderia pseudomallei MSHR346] gi|242140864|gb|EES27266.1| polar amino acid uptake ABC transporter, PAAT family, permease protein [Burkholderia pseudomallei 1106b] Length = 219 Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 58/207 (28%), Positives = 105/207 (50%), Gaps = 14/207 (6%) Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247 K V S VLG+++ L L R + A+ Y+S L+ G P LV + + +++ Sbjct: 23 KFAVASMVLGLIVGLLVA-LVRIGSNRLLSAIAQGYVS--LMRGTPLLVQM---FVVYYG 76 Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307 P +G ++ P ++ L+ A+++E +R ++ + RGQ A+ +LGLTH Sbjct: 77 LPDIG-------ISLDPTAAGIF-TLTLNAGAYLSESMRGAILGIGRGQWAASHSLGLTH 128 Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367 + R V+ PQA+R +P L + ++L+K++SL + +L+ +I T Q + + Sbjct: 129 VQTLRHVICPQALRLAVPSLGNTLISLIKDTSLVSVITVTELLRSTQEVIASTFQPLPLY 188 Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIAL 394 L IY LS ++A R+ + AL Sbjct: 189 LAAAAIYWVLSTLLARLQGRIETRCAL 215 Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust. Identities = 29/96 (30%), Positives = 46/96 (47%), Gaps = 12/96 (12%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151 G V T A + M+ I+G LV R+ +N+L++ I + YV + R P LV +F +Y Sbjct: 17 GAVLTMKFAVASMVLGLIVGLLVALVRIGSNRLLSAIAQGYVSLMRGTPLLVQMFVVYYG 76 Query: 152 VLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187 +PD G+ L+ TLT++ A Sbjct: 77 ------LPD------IGISLDPTAAGIFTLTLNAGA 100 >gi|329939956|ref|ZP_08289238.1| glutamate uptake system [Streptomyces griseoaurantiacus M045] gi|329300782|gb|EGG44678.1| glutamate uptake system [Streptomyces griseoaurantiacus M045] Length = 308 Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 45/146 (30%), Positives = 81/146 (55%), Gaps = 4/146 (2%) Query: 256 FIGGSTVSPEFMSLY---IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312 ++ + +S E LY L Y A+ +AEIVR+G++++P+GQ EAA A+GL + Sbjct: 126 YVQSTDISSESRPLYAVVTGLVLYNASVLAEIVRAGILSLPKGQSEAAHAIGLRKSQTMT 185 Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV-GFADLVSVGGTIINQTGQAIEIILIWM 371 +LLPQA+ ++P + SQ + ++K+++L AV F +L+S T I ++ Sbjct: 186 SILLPQAVTVMLPAIVSQLVVIVKDTALGGAVLNFTELLSARKTEAAFYANVIPSFVVVG 245 Query: 372 FIYLSLSIMIALFMNRLNAKIALKEK 397 IY+ L++ + F L K+ ++ Sbjct: 246 LIYILLNLALTTFAGWLERKLRRSKR 271 Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust. Identities = 25/70 (35%), Positives = 38/70 (54%) Query: 78 PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137 P+T +++ T +L G T A M+ A +G L G RLS ++ V V VE FR Sbjct: 52 PFTLSTTWTTYLLPGLGETLKAAALSMVIALPLGALFGIARLSDHRWVRVPAGVIVEFFR 111 Query: 138 NIPPLVVIFF 147 +IP L+++ F Sbjct: 112 SIPVLLMMIF 121 >gi|188532631|ref|YP_001906428.1| GltK protein [Erwinia tasmaniensis Et1/99] gi|188027673|emb|CAO95524.1| GltK protein [Erwinia tasmaniensis Et1/99] Length = 229 Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 56/180 (31%), Positives = 96/180 (53%), Gaps = 19/180 (10%) Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239 TL M T+A + +LG++++ A R G +L++ I G+P + +I Sbjct: 31 TLIMATSAGFL--ALMLGVLMAGLAWRYG-------GWTRRVLFLWASFIRGIPLIFVI- 80 Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299 + L+F PV+ GGS P +++ IAL+ +T+A + +GL ++P GQ EA Sbjct: 81 --FWLYFLLPVV-----FGGSIPGP--LTVIIALAWFTSAAVMHSTLAGLESLPAGQTEA 131 Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359 IA G + K ++LLPQA +++P ++LLK++SLA V +L +V G + N+ Sbjct: 132 GIASGFSKIKILTVILLPQAWPNLLPSYLGLLISLLKDTSLAFIVNVPELTTVAGQVNNR 191 >gi|167580938|ref|ZP_02373812.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Burkholderia thailandensis TXDOH] Length = 219 Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 57/211 (27%), Positives = 106/211 (50%), Gaps = 14/211 (6%) Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247 K V S VLG+++ L + R + + A+ Y+S L+ G P LV + + +++ Sbjct: 23 KFAVASMVLGLIVGLVVA-IVRIGNNRFLSAIAQGYVS--LMRGTPLLVQM---FVVYYG 76 Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307 P +G ++ P ++ L+ A+++E +R ++ + RGQ A+ +LGLTH Sbjct: 77 LPDIG-------ISLDPTSAGIF-TLTLNAGAYLSESMRGAILGIGRGQWAASHSLGLTH 128 Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367 + R V+ PQA+R +P L + ++L+K++SL + +L+ +I T Q + + Sbjct: 129 AQTLRYVICPQALRLAVPSLGNTLISLIKDTSLVSVITVTELLRSTQEVIASTFQPLPLY 188 Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 L IY LS ++A R+ + AL Sbjct: 189 LAAAAIYWVLSTLLARLQGRIETRCALPSTH 219 >gi|210630270|ref|ZP_03296360.1| hypothetical protein COLSTE_00244 [Collinsella stercoris DSM 13279] gi|210160596|gb|EEA91567.1| hypothetical protein COLSTE_00244 [Collinsella stercoris DSM 13279] Length = 290 Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 53/167 (31%), Positives = 95/167 (56%), Gaps = 17/167 (10%) Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFM-SLYIALSCYTAAFIAEIVRSGL 289 G+P+L+LI +F V+ Q+ G +S +M +L +AL+ + +AE+ R+G+ Sbjct: 127 GVPSLLLI------YFFFLVVPQY----GIRMSSFWMITLPVALAA--SGVLAEVFRAGM 174 Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349 AVPRGQ EAA+ALG+ + ++LPQA+R +IP L SQ + ++K++++A V + D+ Sbjct: 175 NAVPRGQTEAALALGMRPFRVKLKIVLPQAIRYVIPSLISQLVVVVKDTTVAYVVSYPDM 234 Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 + +I + L+ IY+ L+ I N+L+ +A + Sbjct: 235 LQNARVLITNYDALVSTYLVVAVIYILLNYAI----NQLSVYVARRS 277 Score = 37.7 bits (86), Expect = 3.1, Method: Compositional matrix adjust. Identities = 24/85 (28%), Positives = 45/85 (52%), Gaps = 7/85 (8%) Query: 79 YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138 +T S++A ++ G T +A + A ++G + GR S + +A +CRV + FR Sbjct: 69 FTWGSTWAY-LMAGLRGTLTVALTAGAIALVLGLALMLGRTSGIRWLAALCRVVTDFFRG 127 Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSI 163 +P L++I+F + L +P + I Sbjct: 128 VPSLLLIYFFF------LVVPQYGI 146 >gi|29833750|ref|NP_828384.1| ABC transporter permease protein [Streptomyces avermitilis MA-4680] gi|29610874|dbj|BAC74919.1| putative polar amino acid ABC transporter substrate-binding protein [Streptomyces avermitilis MA-4680] Length = 318 Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 42/130 (32%), Positives = 69/130 (53%), Gaps = 4/130 (3%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + LS AA+ AE+VR G+++V +GQ EAA ALGL ++ PQA+RSI P +Q Sbjct: 163 VGLSLNEAAYAAEVVRGGILSVDQGQHEAAAALGLPKSYQFTKIVFPQALRSITPNYVNQ 222 Query: 331 YLNLLKNSSLAVAVGFADLV----SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386 + L+K +SL V DL ++G T + ++ +W I S+ ++ ++ Sbjct: 223 LIGLIKGTSLVFYVSLLDLFGSAQTMGSTYPGDIVPLLLVVTVWYLILTSIVSVVQFYVE 282 Query: 387 RLNAKIALKE 396 R A+ A + Sbjct: 283 RHYARGATRS 292 >gi|90581126|ref|ZP_01236925.1| Putative amino acid ABC transporter, permease protein [Vibrio angustum S14] gi|90437647|gb|EAS62839.1| Putative amino acid ABC transporter, permease protein [Vibrio angustum S14] Length = 223 Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 57/173 (32%), Positives = 92/173 (53%), Gaps = 19/173 (10%) Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV-LI 238 TL M T IF + V+G++L+L R + L LYIS F G P LV L Sbjct: 22 TLLMATIGAIF--ALVVGLILALV-----RIYQLPLLNTLTQLYISFFR--GTPLLVQLF 72 Query: 239 ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQME 298 L Y L P L + F + I LS + AA++AE +R+ + V R Q E Sbjct: 73 LLYYGLPQIIPSLVGLD---------AFSAAVIGLSLHFAAYMAESIRAAITGVDRSQRE 123 Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 A++A+G+T + R ++LPQA R +P L + +++++K++SLA +G ++++ Sbjct: 124 ASLAIGMTEWQTMRRIILPQATRIALPSLMNYFIDMIKSTSLAFTLGVPEIMA 176 >gi|318060996|ref|ZP_07979717.1| glutamate transporter permease [Streptomyces sp. SA3_actG] Length = 300 Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 45/163 (27%), Positives = 92/163 (56%), Gaps = 16/163 (9%) Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249 V + LG V + RLS H + A + + + +P L+++ + Y ++ Sbjct: 79 MVIALPLGAVFGI--ARLSDHVWVRVPSATVVEFFRS-----IPVLIMMIVAYAVY---- 127 Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309 Q+ + ST ++ L Y A+ +AEIVR+G++++P+GQ EAA A+GL + Sbjct: 128 --AQYTSV--STDDRPLYAVVTGLVLYNASVLAEIVRAGILSLPKGQTEAAQAIGLRKGQ 183 Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV-GFADLVS 351 R +LLPQ++ +++P + SQ + ++K++++ ++ GF++L++ Sbjct: 184 TMRSILLPQSVTAMLPAIVSQLVVIVKDTAIGGSILGFSELIN 226 >gi|222148523|ref|YP_002549480.1| ABC transporter membrane spanning protein (amino acid) [Agrobacterium vitis S4] gi|221735509|gb|ACM36472.1| ABC transporter membrane spanning protein (amino acid) [Agrobacterium vitis S4] Length = 267 Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 58/211 (27%), Positives = 105/211 (49%), Gaps = 11/211 (5%) Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231 + G F +T+ A F ++G +++L AT+ S + I T + G Sbjct: 47 DEIGFGFK-VTVTLAAATLPFGLLIGFLMAL-ATQSSERMLRQAAA------IYTTIFRG 98 Query: 232 LPTLVLIALKYQLH--FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289 LP L+ + + Y + VL F ++ F + IAL+ +++ AE+++S Sbjct: 99 LPELLTLFIVYYGSQILIQAVLASMGFEERIEINAFFAGM-IALALVFSSYCAEVLQSAF 157 Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349 A+P GQ EA A+GL+ K LV++PQ +R +P + + ++NLLK+++L +G +D+ Sbjct: 158 RAIPSGQYEAGFAIGLSRTKTMLLVIVPQLIRIALPGIVNLWMNLLKDTALVSVIGLSDI 217 Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380 + G T +A I +YL L+I+ Sbjct: 218 IRQTGIAARVTKEAFLFYTIACALYLVLAIL 248 >gi|220929054|ref|YP_002505963.1| polar amino acid ABC transporter inner membrane subunit [Clostridium cellulolyticum H10] gi|219999382|gb|ACL75983.1| polar amino acid ABC transporter, inner membrane subunit [Clostridium cellulolyticum H10] Length = 248 Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 53/181 (29%), Positives = 96/181 (53%), Gaps = 14/181 (7%) Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH---FDK 248 F+ VLG++L+ +LS++ + + + LYI L +PTL+ + Y + F + Sbjct: 40 FAVVLGVLLTF--GQLSKY---RVIRFISFLYIE--LCRNIPTLIWLLFFYYVFPELFSE 92 Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308 P+ N + + F + LS ++ +I+EI+R G+ V + Q+ AA LG + Sbjct: 93 PIKTMLN----NNQALNFWAAIAGLSISSSGYISEIIRGGISGVSKEQVSAARTLGHSQW 148 Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368 + ++ PQA+R PPL S+ ++ +KNSSLA+A+ ++V I + T + IE + Sbjct: 149 EIWIYIIWPQAIRICFPPLVSRLIHNMKNSSLALALSVHEIVWATQQIESITFRGIEATI 208 Query: 369 I 369 I Sbjct: 209 I 209 Score = 37.7 bits (86), Expect = 2.9, Method: Compositional matrix adjust. Identities = 22/72 (30%), Positives = 39/72 (54%), Gaps = 6/72 (8%) Query: 107 ATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLP 166 A ++G L+ G+LS +++ +I +Y+E+ RNIP L+ + F Y + P + Sbjct: 41 AVVLGVLLTFGQLSKYRVIRFISFLYIELCRNIPTLIWLLFFYYVFPELFSEPIKT---- 96 Query: 167 FGMFLNNRGLSF 178 M NN+ L+F Sbjct: 97 --MLNNNQALNF 106 >gi|289678375|ref|ZP_06499265.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. syringae FF5] Length = 277 Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 46/119 (38%), Positives = 74/119 (62%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IALS A+++EI R+G+I V GQ EAA+AL L + V LPQAMR+IIPP T+Q Sbjct: 148 IALSLNYGAYLSEIFRAGIIGVSAGQREAALALALRPAQIFWRVTLPQAMRTIIPPTTNQ 207 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 ++++LK+SSL +G +++ + + + + IE++ +Y +SI + L +RL Sbjct: 208 FISMLKDSSLISVMGVWEVMFLAQSYGRSSYRYIEMLTTAAVLYWIMSIGLELLQSRLE 266 >gi|311108218|ref|YP_003981071.1| amino ABC transporter permease, 3-TM region, His/Glu/Gln/Arg/opine family domain-containing protein 18 [Achromobacter xylosoxidans A8] gi|310762907|gb|ADP18356.1| amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family domain protein 18 [Achromobacter xylosoxidans A8] Length = 230 Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 40/127 (31%), Positives = 71/127 (55%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F++ + L+ A++AE+ RSG+ +V GQ EAA ALGL + R ++LPQA+R++ P Sbjct: 86 FVAGVLGLTLNFGAYLAELFRSGIQSVDSGQYEAARALGLGKVQRLRRIVLPQALRTVFP 145 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 L + L L+K +SL + +L+ G + T QA+ + + IY ++ ++A Sbjct: 146 ALGNYALVLIKETSLVAVISVYELMRAGEMLAGATFQALTVYTMVGVIYFAMCSVLAYLF 205 Query: 386 NRLNAKI 392 R ++ Sbjct: 206 RRSEKRL 212 >gi|293605651|ref|ZP_06688030.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Achromobacter piechaudii ATCC 43553] gi|292815935|gb|EFF75037.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Achromobacter piechaudii ATCC 43553] Length = 218 Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 55/186 (29%), Positives = 98/186 (52%), Gaps = 12/186 (6%) Query: 207 LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF 266 ++R + A+ +Y++ +I G P +V + Y F P+L V E+ Sbjct: 42 VTRAYGHPILSAIAQVYVA--VIRGTPIVVQVMFIY---FALPLLADIR------VDAEW 90 Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326 ++ + L + A+I+EIVR L++V +G EA A+GL K ++ P A R +IPP Sbjct: 91 AAI-VTLIINSGAYISEIVRGALLSVHKGLKEAGQAMGLPFHKILFHIIGPVAFRRMIPP 149 Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386 L +Q + LK+SSL + +G A+L G I+ +A+EI +YL L+ ++AL ++ Sbjct: 150 LGNQCIISLKDSSLFIVIGVAELTRQGQEIMASNFRAVEIWSAVAIVYLILTGLMALGLH 209 Query: 387 RLNAKI 392 + ++ Sbjct: 210 LVEKRM 215 >gi|159185731|ref|NP_357188.2| ABC transporter, nucleotide binding/ATPase protein [Agrobacterium tumefaciens str. C58] gi|159140865|gb|AAK89973.2| ABC transporter, nucleotide binding/ATPase protein [Agrobacterium tumefaciens str. C58] Length = 603 Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 45/146 (30%), Positives = 78/146 (53%), Gaps = 5/146 (3%) Query: 255 NFIGGSTVS--PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312 NFI +T F + + L+ AAF +EIVR G+++V +GQ+EAA ALGL R+ Sbjct: 159 NFISWNTTQLMTPFAAAILGLTLNQAAFASEIVRGGILSVDQGQLEAAAALGLPRRRQAS 218 Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL---I 369 ++LPQAMRSI+P + + L K +S + +L I + + I +++ + Sbjct: 219 RIILPQAMRSILPTAFNDIIGLAKGTSQVYILALPELFYTIQIIYRRNLEVIPLLMVATV 278 Query: 370 WMFIYLSLSIMIALFMNRLNAKIALK 395 W + L+ ++ + R ++ AL+ Sbjct: 279 WYLVILTALSIVQHHIERHFSRGALR 304 >gi|329999713|ref|ZP_08303488.1| ABC transporter, permease protein [Klebsiella sp. MS 92-3] gi|328538244|gb|EGF64390.1| ABC transporter, permease protein [Klebsiella sp. MS 92-3] Length = 308 Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 37/134 (27%), Positives = 76/134 (56%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 +F + + L+ +A+ AEI+R G + V GQ EAA ALGL + T ++LPQA+R+I+ Sbjct: 146 QFSTAVVGLTLVQSAYTAEIIRGGFLGVDHGQYEAAAALGLPAWRRTLRIILPQALRTIL 205 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 P ++ ++L K +++ + +L I N+T + I ++++ YL+++ +++ Sbjct: 206 PSGFNEIISLAKGTAMVYVLAMPELFYTIQMIYNRTQEVIPLLMVGAAWYLAITSVLSAI 265 Query: 385 MNRLNAKIALKEKK 398 + +A E++ Sbjct: 266 QYLVERGLARSERR 279 >gi|291457926|ref|ZP_06597316.1| amino acid ABC transporter, permease protein [Oribacterium sp. oral taxon 078 str. F0262] gi|291419470|gb|EFE93189.1| amino acid ABC transporter, permease protein [Oribacterium sp. oral taxon 078 str. F0262] Length = 215 Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 34/115 (29%), Positives = 69/115 (60%), Gaps = 1/115 (0%) Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 AA+ AEI RSG+ ++P+GQ EAA LG + ++ ++LPQ ++ I+P +T++ + L+K+ Sbjct: 97 AAYFAEIYRSGIQSIPKGQYEAAEILGYSRAQSFLRIILPQVIKRILPAVTNEVITLVKD 156 Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 +SLA ++ ++ + + + +I +F Y+ + ++A M RL ++ Sbjct: 157 TSLAFSISVMEMFTAAKALSSAQSSMTPLIAAGIFYYI-FNFIVAFLMERLEKRL 210 >gi|153011816|ref|YP_001373029.1| polar amino acid ABC transporter, inner membrane subunit [Ochrobactrum anthropi ATCC 49188] gi|151563704|gb|ABS17200.1| polar amino acid ABC transporter, inner membrane subunit [Ochrobactrum anthropi ATCC 49188] Length = 216 Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 34/90 (37%), Positives = 54/90 (60%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + L Y++A++ E ++A+P+GQ EA+ +LGL RL++LPQA+R +PP Sbjct: 92 LCLWIYSSAYLTETWYGCVLAIPKGQWEASSSLGLKSWPQMRLIILPQAVRISVPPTVGI 151 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 + ++KN+SLA VGF +L I N T Sbjct: 152 LVQVVKNTSLASIVGFVELTRASQMIANAT 181 >gi|150403150|ref|YP_001330444.1| polar amino acid ABC transporter inner membrane subunit [Methanococcus maripaludis C7] gi|150034180|gb|ABR66293.1| polar amino acid ABC transporter, inner membrane subunit [Methanococcus maripaludis C7] Length = 226 Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 65/209 (31%), Positives = 110/209 (52%), Gaps = 28/209 (13%) Query: 188 KIFVFSFVLGIVLS--LFATRLSRHFHEKTGKALPLLYISTFLI---FGLPTLVLIALKY 242 KI VFS ++G+ L L R+S + + Y S+F I G P LV I + Y Sbjct: 30 KITVFSIIIGLFLGTILGMGRISYNILYR--------YFSSFYIEFVRGTPLLVQIMIIY 81 Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302 F P G N + + +AL + A++ EI+++G+++V GQMEAA + Sbjct: 82 ---FGLPSFG-INL-------SAYTAGILALGLNSGAYVGEIIKAGILSVHVGQMEAARS 130 Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362 LG+ + +A R ++LPQA R+++P + ++++ LLK+SSL + +L VG I + T Sbjct: 131 LGMNYAQAMRYIILPQAFRNVLPAIGNEFILLLKDSSLLSVIAIVELTRVGKQIYSSTYN 190 Query: 363 A----IEIILIWMFIYLSLSIMIALFMNR 387 A + + L ++ + L LS ++ NR Sbjct: 191 AWTPLLGVALFYLIMTLPLSKLVQHIENR 219 >gi|223933393|ref|ZP_03625380.1| polar amino acid ABC transporter, inner membrane subunit [Streptococcus suis 89/1591] gi|302023343|ref|ZP_07248554.1| transport system membrane protein [Streptococcus suis 05HAS68] gi|330832144|ref|YP_004400969.1| polar amino acid ABC transporter inner membrane subunit [Streptococcus suis ST3] gi|223897960|gb|EEF64334.1| polar amino acid ABC transporter, inner membrane subunit [Streptococcus suis 89/1591] gi|329306367|gb|AEB80783.1| polar amino acid ABC transporter, inner membrane subunit [Streptococcus suis ST3] Length = 223 Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 46/167 (27%), Positives = 89/167 (53%), Gaps = 13/167 (7%) Query: 228 LIFGLPTLVLIALKYQLHFDKPVLG-QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286 L+ G+P +VL+ + ++F P +G Q + I S IA + ++A+I+EI+R Sbjct: 67 LMRGIPLMVLL---FFIYFGLPFMGLQLDAISASI---------IAFTSMSSAYISEIIR 114 Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346 + L A+ +GQ EAA +LGL R +++PQA R +PPL++ L+++K++SL + Sbjct: 115 ASLSAIDKGQWEAARSLGLRTNVIYRKIIIPQAFRIALPPLSNVLLDMVKSTSLTAMITV 174 Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393 ++ + + + + + IY ++ + A RL ++A Sbjct: 175 PEIFNKAKIVGGAKSDYMTVYICVALIYWAICTLYAFGQLRLEKRLA 221 >gi|240102153|ref|YP_002958461.1| ABC-type amino acid transport system, permease component [Thermococcus gammatolerans EJ3] gi|239909706|gb|ACS32597.1| ABC-type amino acid transport system, permease component [Thermococcus gammatolerans EJ3] Length = 189 Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 57/189 (30%), Positives = 99/189 (52%), Gaps = 13/189 (6%) Query: 207 LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL--GQF-NFIGGSTVS 263 ++R + + +AL YI LI G P L+ + Y + F P++ F NF+ TV+ Sbjct: 1 MARTYGGRLSRALSATYIE--LIRGTPMLLQL---YIIGFGLPLVIRDHFPNFVMDPTVA 55 Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 + + +AA+ AE +R ++ GQ+EAA++LG+T + R V+ PQA R + Sbjct: 56 AA-----LGMVINSAAYQAEYIRGAFNSIEYGQVEAALSLGMTKWEIIRHVIFPQAFRIM 110 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 +P T++ + LLK SSLA+ + +L+ +QT +I L+ IYL + +I Sbjct: 111 LPSWTNEMVYLLKYSSLAMLLAVPELMYEASVAASQTFLYAQIYLVVAGIYLVFATLIIG 170 Query: 384 FMNRLNAKI 392 M ++ K+ Sbjct: 171 IMRKVELKL 179 >gi|239908613|ref|YP_002955355.1| hypothetical membrane protein [Desulfovibrio magneticus RS-1] gi|239798480|dbj|BAH77469.1| hypothetical membrane protein [Desulfovibrio magneticus RS-1] Length = 266 Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 49/153 (32%), Positives = 77/153 (50%), Gaps = 25/153 (16%) Query: 219 LPLLYISTFLIFGLPTLVLIALKY-----QLHFDKP-VLGQFNFIGGSTVSPEFMSLYIA 272 L LY+ F G P LV I + Y + D P V+G F Sbjct: 97 LAALYVGAFR--GTPLLVQILIFYFCVGVVVRVDSPFVIGTFT----------------- 137 Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 LS ++ A+I+E+VR+G+ +V GQ EAA++ G+T +A V+LPQA R I+ P+T Q++ Sbjct: 138 LSLFSGAYISEMVRAGVESVDHGQWEAAMSSGMTRGQALLHVVLPQAARRIVAPVTGQFV 197 Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365 + +K+SSL + +L + T + E Sbjct: 198 SCIKDSSLLSVISLRELTKAAEVVNASTYRTFE 230 >gi|158321613|ref|YP_001514120.1| polar amino acid ABC transporter, inner membrane subunit [Alkaliphilus oremlandii OhILAs] gi|158141812|gb|ABW20124.1| polar amino acid ABC transporter, inner membrane subunit [Alkaliphilus oremlandii OhILAs] Length = 213 Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 55/212 (25%), Positives = 99/212 (46%), Gaps = 34/212 (16%) Query: 183 MDTNAKIFVFSFVLGIVLSLFAT--RLSR--------HFHEKTGKALPLLYISTFLIFGL 232 M +IF+ + L I L L RLS F+ + PLL F+ FGL Sbjct: 15 MFATIEIFIVTLCLSIPLGLVVALGRLSTVKIINRVIQFYILIMRGTPLLLQLVFVFFGL 74 Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292 P + G T+ + +L +AL+ AA+ AEI R G+ ++ Sbjct: 75 PYV-----------------------GITLDRKTAAL-LALTLNYAAYFAEIFRGGIDSI 110 Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352 +GQ EAA+ LG + + + ++LPQ + ++P + ++ + L+K++SL VG +L+ Sbjct: 111 NQGQYEAAMVLGFSKYRTIQRIILPQVFKVVLPSVGNEVITLVKDTSLVYVVGLGELLRA 170 Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 G N+ + ++ + M + +SI+ +F Sbjct: 171 GKIAANRDASLLPLVAVGMVYLILISILTEVF 202 >gi|159042876|ref|YP_001531670.1| glutamate/glutamine/aspartate/asparagine ABC transport system permease [Dinoroseobacter shibae DFL 12] gi|157910636|gb|ABV92069.1| glutamate/glutamine/aspartate/asparagine ABC transport system permease [Dinoroseobacter shibae DFL 12] Length = 432 Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 33/91 (36%), Positives = 60/91 (65%), Gaps = 1/91 (1%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I ++ + +A+IAE +R GL A+PRGQ EA +LGL + ++ RL++LPQA++ IP + + Sbjct: 302 IMITLFASAYIAEAIRGGLAALPRGQYEAGDSLGLDYWQSMRLIILPQALKISIPSIVNI 361 Query: 331 YLNLLKNSSLAVAVGFADLVS-VGGTIINQT 360 + L K+++L + D++ + G I++ T Sbjct: 362 AIGLFKDTTLVSIISMFDMLGMIQGPILSST 392 >gi|120612397|ref|YP_972075.1| polar amino acid ABC transporter inner membrane subunit [Acidovorax citrulli AAC00-1] gi|120590861|gb|ABM34301.1| amino acid ABC transporter membrane protein 2, PAAT family [Acidovorax citrulli AAC00-1] Length = 266 Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 41/123 (33%), Positives = 72/123 (58%), Gaps = 2/123 (1%) Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326 ++L IA S TAA +AE+ RSG++AVPRGQ +AA +LG+T + ++ PQA+R I+P Sbjct: 142 LTLPIAFS--TAAVVAEVYRSGVLAVPRGQTDAARSLGMTETQVFFAIVFPQALRYIVPA 199 Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386 L +Q + ++K+++ V + +L+ +I + + LI +Y ++ I+ Sbjct: 200 LVAQLVIVVKDTTFGYVVTYGELMQNARVLIANYHSLVPVYLIVAALYCLVNYAISRASR 259 Query: 387 RLN 389 RL Sbjct: 260 RLG 262 >gi|300933044|ref|ZP_07148300.1| glutamate ABC transport system, permease protein [Corynebacterium resistens DSM 45100] Length = 228 Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 55/183 (30%), Positives = 96/183 (52%), Gaps = 7/183 (3%) Query: 217 KALPLLYISTFLIFGLPTLVLIA-LKYQLHFDKPVLGQFNFIGGS-TVSPEFMSLYIALS 274 +++ YI+T L +VL A L ++ D + GQ G + T + F +A Sbjct: 50 RSIATFYINTVRNTPLTLIVLFASLGLYVNLDIALAGQ----GATFTTTNNFRLAVLAFV 105 Query: 275 CYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNL 334 YT++F+AE +RSG+ VP GQ EAA +LGL+ + R ++ PQA+R I PL + + L Sbjct: 106 LYTSSFVAESLRSGINTVPFGQAEAARSLGLSFFQNFRHIIFPQALRGAIVPLGNTLIAL 165 Query: 335 LKNSSLAVAVGFADL-VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393 KN+++A +G A+ + + T+ N Q I + ++ L++ + L ++A Sbjct: 166 TKNTTIASVIGVAEASLLMKSTVENHANQVFVIFGVIALGFVILTLPMGLAFGAAGKRLA 225 Query: 394 LKE 396 +K Sbjct: 226 VKR 228 >gi|239907741|ref|YP_002954482.1| amino acid ABC transporter permease protein [Desulfovibrio magneticus RS-1] gi|239797607|dbj|BAH76596.1| amino acid ABC transporter permease protein [Desulfovibrio magneticus RS-1] Length = 230 Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 51/171 (29%), Positives = 95/171 (55%), Gaps = 13/171 (7%) Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPV--LGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280 Y+S F G P +V + Y +F P +G F + +SP + ++ + + + A+ Sbjct: 59 YVSLFR--GTPLVVQL---YFWYFALPYVRIGDFALV----LSPMWAAI-VGFALCSGAY 108 Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340 +E +R GL+++ RGQ+ AA ALG+T ++ V+LPQA R +P ++ + L+K SSL Sbjct: 109 QSEYIRGGLLSIKRGQLRAAQALGMTPFQSVTSVVLPQAFRRALPGCGNEIIYLIKYSSL 168 Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 A + +DL +G ++ + + E+ ++ YL+L + IA F+ ++ K Sbjct: 169 ASIITVSDLTGMGRSLAKSSFRNTEVFIVVGLYYLAL-VTIASFLLKIAEK 218 >gi|239907739|ref|YP_002954480.1| amino acid ABC transporter permease protein [Desulfovibrio magneticus RS-1] gi|239797605|dbj|BAH76594.1| amino acid ABC transporter permease protein [Desulfovibrio magneticus RS-1] Length = 237 Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 60/201 (29%), Positives = 109/201 (54%), Gaps = 11/201 (5%) Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD-KPVL 251 FVLG+ L++ L + H T KA+ Y+ +L G+P LV + Y +F L Sbjct: 36 GFVLGVPLAV----LHVYGHPLTRKAVAG-YV--WLFRGVPILVQL---YLFYFGIMAYL 85 Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311 + + +S F+S I L +AA+ ++I R + ++P GQ++AA ALG++ A Sbjct: 86 SEIPALSFLPLSSGFLSAVIVLGLTSAAYQSQIFRGAMASLPAGQLKAARALGMSDAVAI 145 Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371 R ++LPQA+R IP +++Y LLK+S+LA +G ++++ ++ T Q + + ++ Sbjct: 146 RSIILPQALRLAIPAWSNEYSILLKDSALAFTIGVLEVMARTRSVAATTHQPLPLSILAG 205 Query: 372 FIYLSLSIMIALFMNRLNAKI 392 ++ L+ + RL AK+ Sbjct: 206 ALFFFLTWAGIKTLKRLEAKV 226 >gi|254250433|ref|ZP_04943752.1| phosphate ABC transporter, ATP-binding protein pstB [Burkholderia cenocepacia PC184] gi|124879567|gb|EAY66923.1| phosphate ABC transporter, ATP-binding protein pstB [Burkholderia cenocepacia PC184] Length = 604 Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 45/147 (30%), Positives = 81/147 (55%), Gaps = 7/147 (4%) Query: 256 FIGGST---VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312 F+ G T ++P FM+ + L+ AAF AE +R G+++V GQ EAA ALGL + T Sbjct: 157 FLRGPTTDLITP-FMAAILGLTLTQAAFAAEAIRGGILSVDHGQREAAAALGLPRARQTW 215 Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL---I 369 ++LPQAMR+I+P + + L K +++ + DL I ++ + I +++ + Sbjct: 216 RIVLPQAMRAILPAAFNDVIGLAKGTAVVYILAMPDLFYTVQIIYHRNLEVIPMLMVATV 275 Query: 370 WMFIYLSLSIMIALFMNRLNAKIALKE 396 W + L++ I + + R A+ A ++ Sbjct: 276 WYLVILTVLSAIQVHIERHYARGATRD 302 >gi|89898982|ref|YP_521453.1| amino acid ABC transporter permease [Rhodoferax ferrireducens T118] gi|89343719|gb|ABD67922.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Rhodoferax ferrireducens T118] Length = 214 Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 41/133 (30%), Positives = 69/133 (51%), Gaps = 1/133 (0%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G SP ++ I L+ Y +A++ EI R + A+P+GQ EA+ +L L + R V+LPQ Sbjct: 80 GMDTSP-LVAAAICLTLYASAYLTEIWRGCVNAIPKGQWEASTSLALNFTQQMRHVILPQ 138 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378 A+ I P + ++K ++LA +GF +L G I N T Q + +Y +L Sbjct: 139 ALHVAIAPTVGFLVQIIKGTALASVIGFVELTKAGQMISNATYQPFLAYIFVGLLYFALC 198 Query: 379 IMIALFMNRLNAK 391 ++ + RL + Sbjct: 199 YPLSWWSQRLENR 211 >gi|83643770|ref|YP_432205.1| amino acid ABC transporter permease [Hahella chejuensis KCTC 2396] gi|83631813|gb|ABC27780.1| ABC-type amino acid transport system, permease component [Hahella chejuensis KCTC 2396] Length = 220 Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 41/123 (33%), Positives = 68/123 (55%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IAL A+ AE+VR ++AVP+GQ EAA+AL T ++LPQ++ ++IPP + Sbjct: 88 IALGLNIGAYGAEVVRGSVLAVPKGQYEAAVALNFTPWSRLWRIILPQSLVNMIPPFGNL 147 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 + L+K +SL + DL T+ + T Q EI + + IY ++ ++A L A Sbjct: 148 AIELMKATSLVSLITIGDLTYKAKTLADATLQVGEIFGLVLLIYFVIAQVMAYLFRLLEA 207 Query: 391 KIA 393 ++ Sbjct: 208 RLG 210 >gi|240122516|ref|ZP_04735472.1| Putative ABC transporter, permease protein, amino acid [Neisseria gonorrhoeae PID332] gi|268681105|ref|ZP_06147967.1| ABC-type amino acid transport system protein [Neisseria gonorrhoeae PID332] gi|268621389|gb|EEZ53789.1| ABC-type amino acid transport system protein [Neisseria gonorrhoeae PID332] Length = 219 Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 55/181 (30%), Positives = 92/181 (50%), Gaps = 16/181 (8%) Query: 228 LIFGLPTLVLIALKY-----------QLHFDKPVLGQ--FNFIGGSTVSPE---FMSLYI 271 L+FGLP V+ A + +L + P+L Q F + G + + F I Sbjct: 32 LLFGLPVAVVTAYRIRPFYALARAYIELSRNTPLLIQLFFLYYGLPKMGIKWDGFTCGVI 91 Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 AL A+++AE VR+G++AVP+GQ+ A A+GL+ + R V LPQ +P + + Sbjct: 92 ALVFLGASYMAEAVRAGILAVPKGQVGAGKAIGLSRFQVFRYVELPQVWAVAVPAIGANI 151 Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 L L+K +S+ VG A+L+ V +I + E + + YL + + ++L RL + Sbjct: 152 LFLMKETSVVSTVGIAELLFVTKDVIGMDYKTNEALFLLFAAYLIILLPVSLLARRLENR 211 Query: 392 I 392 I Sbjct: 212 I 212 >gi|24379609|ref|NP_721564.1| putative amino acid ABC transporter, permease protein [Streptococcus mutans UA159] gi|290580391|ref|YP_003484783.1| putative amino acid ABC transporter permease [Streptococcus mutans NN2025] gi|24377558|gb|AAN58870.1|AE014954_9 putative amino acid ABC transporter, permease protein [Streptococcus mutans UA159] gi|254997290|dbj|BAH87891.1| putative amino acid ABC transporter permease protein [Streptococcus mutans NN2025] Length = 213 Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 33/91 (36%), Positives = 56/91 (61%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +A + AA+ AEI R G+ A+P+GQ EAA L L+ + R ++LPQ ++ ++P + ++ Sbjct: 89 LAFTLNYAAYFAEIFRGGIEAIPKGQYEAAKVLKLSQIQTVRYIILPQVVKIVLPSVFNE 148 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361 +NL+K+SSL +G DL+ T N+ Sbjct: 149 IINLVKDSSLVYVLGVGDLLLASKTAANRDA 179 >gi|312862890|ref|ZP_07723130.1| ABC transporter, permease protein [Streptococcus vestibularis F0396] gi|311101750|gb|EFQ59953.1| ABC transporter, permease protein [Streptococcus vestibularis F0396] Length = 213 Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 33/91 (36%), Positives = 57/91 (62%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +A + AA+ AEI R G++A+P+GQ EAA L L+ + R ++LPQ ++ ++P + ++ Sbjct: 89 LAFTLNYAAYFAEIFRGGILAIPKGQYEAAKMLKLSSFQTIRYIILPQVVKIVLPSIFNE 148 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361 +NL+K+SSL +G DL+ T N+ Sbjct: 149 IINLVKDSSLVYVLGVGDLLLESRTAANRDA 179 >gi|296102233|ref|YP_003612379.1| amino acid ABC transporter, inner membrane subunit [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295056692|gb|ADF61430.1| amino acid ABC transporter, inner membrane subunit [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 312 Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 37/134 (27%), Positives = 75/134 (55%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 +F + + L+ +A+ AEI+R G + V GQ EAA ALGL + T ++LPQA+R+I+ Sbjct: 146 QFSTAVVGLTLVQSAYTAEIIRGGFLGVDHGQYEAAAALGLPAWRRTVRIILPQALRTIL 205 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 P ++ ++L K +++ + +L I N+T + I ++++ YL ++ +++ Sbjct: 206 PSGFNEIISLAKGTAMVYVLAMPELFYTIQMIYNRTQEVIPLLMVGAAWYLVITTVLSAI 265 Query: 385 MNRLNAKIALKEKK 398 + +A E++ Sbjct: 266 QYGVERGLARSERR 279 >gi|291518712|emb|CBK73933.1| amino acid ABC transporter membrane protein, PAAT family (TC 3.A.1.3.-) [Butyrivibrio fibrisolvens 16/4] Length = 157 Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 36/116 (31%), Positives = 63/116 (54%), Gaps = 6/116 (5%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 GS F + +A A + +EI R G+ ++P+GQ EAA LGLT + ++L Q Sbjct: 21 GSGDGGRFTAALVAFVFNYACYFSEIFRGGIQSIPKGQYEAAAVLGLTKTQTFFKIVLLQ 80 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374 ++ I+PP++++ + L+K++SLA + F +++ G I G +IW Y Sbjct: 81 VVKRIVPPISNEVITLVKDTSLARVIAFYEIIWEGERFIKSAG------IIWPLFY 130 >gi|293603169|ref|ZP_06685602.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Achromobacter piechaudii ATCC 43553] gi|292818400|gb|EFF77448.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Achromobacter piechaudii ATCC 43553] Length = 219 Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 38/126 (30%), Positives = 74/126 (58%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +AL +A+ +E R+G+ ++ +GQMEAA+A+G++ +A VL+PQA R I+P L S Sbjct: 94 VALVLNVSAYNSETFRAGINSIRKGQMEAALAMGMSRHQAMFKVLIPQAARRILPVLAST 153 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 +++L K++SL + ++L + Q+ + +E++ IY + A ++ ++ Sbjct: 154 WISLFKDTSLVSVIAVSELAYASMQVRAQSFRVLEMLTAMAVIYWLMGYPQAKLVDWIHR 213 Query: 391 KIALKE 396 K +KE Sbjct: 214 KYGVKE 219 >gi|227875551|ref|ZP_03993691.1| permease protein of ABC superfamily ATP binding cassette transporter system [Mobiluncus mulieris ATCC 35243] gi|306818861|ref|ZP_07452583.1| ABC superfamily ATP binding cassette transporter, permease protein [Mobiluncus mulieris ATCC 35239] gi|307700944|ref|ZP_07637969.1| ABC transporter, permease protein [Mobiluncus mulieris FB024-16] gi|227843887|gb|EEJ54056.1| permease protein of ABC superfamily ATP binding cassette transporter system [Mobiluncus mulieris ATCC 35243] gi|304648547|gb|EFM45850.1| ABC superfamily ATP binding cassette transporter, permease protein [Mobiluncus mulieris ATCC 35239] gi|307613939|gb|EFN93183.1| ABC transporter, permease protein [Mobiluncus mulieris FB024-16] Length = 302 Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 34/76 (44%), Positives = 50/76 (65%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + L A++AEIVR+GL +V GQ EAA ALG+ R ++LPQAMR I+PP ++ Sbjct: 146 LGLGLNEGAYLAEIVRAGLNSVDPGQWEAATALGMKRSLIMRRIILPQAMRVIVPPTGNE 205 Query: 331 YLNLLKNSSLAVAVGF 346 +++LK +SL A+ F Sbjct: 206 TISMLKTTSLVSAIPF 221 >gi|182435041|ref|YP_001822760.1| putative glutamate ABC transporter permease protein [Streptomyces griseus subsp. griseus NBRC 13350] gi|178463557|dbj|BAG18077.1| putative glutamate ABC transporter permease protein [Streptomyces griseus subsp. griseus NBRC 13350] Length = 295 Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 62/214 (28%), Positives = 102/214 (47%), Gaps = 42/214 (19%) Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI---FGLPTLVLI 238 T+ A V S +LG VL++ RLS H L ++ST L+ +P LV+I Sbjct: 81 TLKAFAYAAVLSLLLGAVLAV--GRLSEHRV--------LRWLSTLLVEFFRAMPVLVMI 130 Query: 239 -----ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293 ALK Q +L L+ Y + +AE+ R+G+ +V Sbjct: 131 FFIFVALKVQ---------------------PLPALVAGLTLYNGSVLAEVFRTGINSVD 169 Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353 RGQ EAA ALG+ + T VL PQA+R+++P + SQ + LK++SL + + + + G Sbjct: 170 RGQREAAYALGMRKTQVTTFVLAPQAVRAMLPTIISQLVVALKDTSLGYLITYEEFLHAG 229 Query: 354 GTIINQTGQAIEIILIWMF---IYLSLSIMIALF 384 I + + I + M IY+ + ++++ F Sbjct: 230 KLIASNLDYDLPFIPVVMVISPIYIGMCMLLSWF 263 Score = 43.5 bits (101), Expect = 0.063, Method: Compositional matrix adjust. Identities = 20/51 (39%), Positives = 36/51 (70%), Gaps = 1/51 (1%) Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIP 159 ++G ++ GRLS ++++ W+ + VE FR +P LV+IFF++ + L V P+P Sbjct: 94 LLGAVLAVGRLSEHRVLRWLSTLLVEFFRAMPVLVMIFFIFVA-LKVQPLP 143 >gi|330900855|gb|EGH32274.1| amino acid ABC transporter permease [Pseudomonas syringae pv. japonica str. M301072PT] Length = 277 Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 46/119 (38%), Positives = 74/119 (62%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IALS A+++EI R+G+I V GQ EAA+AL L + V LPQAMR+IIPP T+Q Sbjct: 148 IALSLNYGAYLSEIFRAGIIGVSAGQREAALALALRPAQIFWRVTLPQAMRTIIPPTTNQ 207 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 ++++LK+SSL +G +++ + + + + IE++ +Y +SI + L +RL Sbjct: 208 FISMLKDSSLISVMGVWEVMFLAQSYGRSSYRYIEMLTTAAVLYWIMSIGLELLQSRLE 266 >gi|317407718|gb|EFV87648.1| hypothetical protein HMPREF0005_03583 [Achromobacter xylosoxidans C54] Length = 217 Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 37/118 (31%), Positives = 69/118 (58%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P + + L+ A+ AE+VR + AVP GQ EA +AL LT + R +++PQA+ ++ Sbjct: 86 PAMLVGIVVLALNAGAYGAEVVRGAIRAVPPGQREAGVALNLTRGQIMRRIVVPQAIPAM 145 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 +PP + + LLKN++L + DL G + ++T + EI + + +Y +++++I Sbjct: 146 LPPAGNLLIELLKNTALVSLITITDLTFRGQLLRSETLRTTEIFTLMLLLYFAVALLI 203 Score = 39.7 bits (91), Expect = 0.93, Method: Compositional matrix adjust. Identities = 21/61 (34%), Positives = 32/61 (52%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G T + ++ A + + G GRLS + V W+ +YVEVFR LV +F+ Sbjct: 15 LLEGLAVTLEIMAGAVVLAVPLALVAGVGRLSTVRPVRWLASIYVEVFRGTSALVQLFWF 74 Query: 149 Y 149 Y Sbjct: 75 Y 75 >gi|269956045|ref|YP_003325834.1| polar amino acid ABC transporter inner membrane subunit [Xylanimonas cellulosilytica DSM 15894] gi|269304726|gb|ACZ30276.1| polar amino acid ABC transporter, inner membrane subunit [Xylanimonas cellulosilytica DSM 15894] Length = 225 Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 35/69 (50%), Positives = 45/69 (65%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + L Y AAF+ E +RSG+ VP GQ EAA A+GL A R+V+LPQA R I PL + Sbjct: 98 VGLGVYHAAFVCESIRSGVNTVPVGQAEAARAIGLPFLAAARIVVLPQAFRGAIAPLGNT 157 Query: 331 YLNLLKNSS 339 + LLKNS+ Sbjct: 158 LIALLKNST 166 Score = 36.2 bits (82), Expect = 9.9, Method: Compositional matrix adjust. Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 4/66 (6%) Query: 97 FWL----AFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSV 152 FWL F G + A IGT++ R+S + W VYV+V RN P V++ FL +V Sbjct: 17 FWLNIQLTFWGALVALAIGTVLAVMRISPLTSLRWAGTVYVDVIRNTPLTVIMTFLVLAV 76 Query: 153 LSVLPI 158 + L + Sbjct: 77 WTQLNV 82 >gi|323257342|gb|EGA41040.1| arginine transporter permease subunit ArtQ [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] Length = 199 Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 53/183 (28%), Positives = 94/183 (51%), Gaps = 2/183 (1%) Query: 217 KALPLLYISTFLIFGLPTLVL-IALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSC 275 + LP + + F+ FG L+L ++ + LH + I VSP F+ IALS Sbjct: 16 RGLPEILVVLFIYFGSSQLLLTLSDGFTLHLGFTQIPVQMEIENFDVSP-FLCGVIALSL 74 Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335 AA+ ++ +R L AVP GQ E+ ALGL+ +++PQ R +P L +Q+L LL Sbjct: 75 LYAAYASQTLRGALKAVPSGQWESGQALGLSKTAIFFRLVMPQMWRHALPGLGNQWLVLL 134 Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395 K+++L + DL+ +I +T + +I IYL ++++ + R++ + Sbjct: 135 KDTALVSLISVNDLMLQTKSIATRTQEPFNWYIIAAAIYLVITLISQYILKRIDLRATRF 194 Query: 396 EKK 398 E++ Sbjct: 195 ERR 197 >gi|158424906|ref|YP_001526198.1| amino acid ABC transporter permease protein [Azorhizobium caulinodans ORS 571] gi|158331795|dbj|BAF89280.1| amino acid ABC transporter permease protein [Azorhizobium caulinodans ORS 571] Length = 217 Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 42/134 (31%), Positives = 68/134 (50%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P +S + L+ Y + F+AEI R + +VP+ Q EAA L L+ + V+LPQAMR Sbjct: 84 PAILSAGLGLTIYASGFLAEIWRGCIESVPKTQWEAAECLSLSRWQRMTKVVLPQAMRIA 143 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 P + ++KN+SLA VGF +L G + N + I ++ IY L ++ Sbjct: 144 TAPTVGFLVQIVKNTSLASVVGFIELSQAGKLVNNSIFEPFTIFIVVASIYFVLCYPLST 203 Query: 384 FMNRLNAKIALKEK 397 + L K+ + + Sbjct: 204 WSRSLERKLNVGRR 217 >gi|84489758|ref|YP_447990.1| polar amino acid ABC transporter permease [Methanosphaera stadtmanae DSM 3091] gi|84373077|gb|ABC57347.1| predicted ABC-type polar amino acid transport system, permease protein [Methanosphaera stadtmanae DSM 3091] Length = 216 Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 41/142 (28%), Positives = 79/142 (55%), Gaps = 2/142 (1%) Query: 252 GQFNFIGGSTVSP-EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 G + +G ST S +++ IA AA+ AEI R G+ ++P+GQ EAA LG T + Sbjct: 72 GPYYILGVSTSSSYRLIAVLIAFIINYAAYFAEIFRGGIESIPKGQYEAAQILGYTKMET 131 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370 +++LPQ + ++P +T++ + L+K++SL+ + +L +V + + + + Sbjct: 132 FFIIILPQVFKIVLPSITNEVITLVKDTSLSFVLAIPELFTVAKQVAASEASILALFIAG 191 Query: 371 MFIYLSLSIMIALFMNRLNAKI 392 +F Y+ L+ ++A M L K+ Sbjct: 192 IFYYI-LNAIVAFIMELLEKKL 212 Score = 38.1 bits (87), Expect = 2.3, Method: Compositional matrix adjust. Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 3/64 (4%) Query: 87 TAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP---PLV 143 T ++ G + T + ++ A +G +V GR+S K + WI R+Y+ V R P L+ Sbjct: 8 TELMGGLITTLEIFILTLLFAIPLGLVVAWGRMSKIKPIQWIMRIYISVMRGTPLMLQLI 67 Query: 144 VIFF 147 V+FF Sbjct: 68 VVFF 71 >gi|53720226|ref|YP_109212.1| amino acid ABC transporter permease [Burkholderia pseudomallei K96243] gi|76809380|ref|YP_334465.1| His/Glu/Gln/Arg/opine ABC transporter permease [Burkholderia pseudomallei 1710b] gi|126441781|ref|YP_001060017.1| polar amino acid ABC transporter permease [Burkholderia pseudomallei 668] gi|134280168|ref|ZP_01766879.1| polar amino acid uptake ABC transporter, PAAT family, permease protein [Burkholderia pseudomallei 305] gi|167739770|ref|ZP_02412544.1| polar amino acid uptake ABC transporter, PAAT family, permease protein [Burkholderia pseudomallei 14] gi|167816990|ref|ZP_02448670.1| polar amino acid uptake ABC transporter, PAAT family, permease protein [Burkholderia pseudomallei 91] gi|167846892|ref|ZP_02472400.1| polar amino acid uptake ABC transporter, PAAT family, permease protein [Burkholderia pseudomallei B7210] gi|167912120|ref|ZP_02499211.1| polar amino acid uptake ABC transporter, PAAT family, permease protein [Burkholderia pseudomallei 112] gi|254180992|ref|ZP_04887590.1| polar amino acid uptake ABC transporter, PAAT family, permease protein [Burkholderia pseudomallei 1655] gi|254258358|ref|ZP_04949412.1| polar amino acid uptake ABC transporter, PAAT family, permease protein [Burkholderia pseudomallei 1710a] gi|254298887|ref|ZP_04966337.1| polar amino acid uptake ABC transporter, PAAT family, permease protein [Burkholderia pseudomallei 406e] gi|288553017|ref|ZP_03452533.2| polar amino acid uptake ABC transporter, PAAT family, permease protein [Burkholderia pseudomallei 576] gi|52210640|emb|CAH36624.1| putative ABC-family amino acid transporter, permease component [Burkholderia pseudomallei K96243] gi|76578833|gb|ABA48308.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Burkholderia pseudomallei 1710b] gi|126221274|gb|ABN84780.1| polar amino acid uptake ABC transporter, PAAT family, permease protein [Burkholderia pseudomallei 668] gi|134248175|gb|EBA48258.1| polar amino acid uptake ABC transporter, PAAT family, permease protein [Burkholderia pseudomallei 305] gi|157808749|gb|EDO85919.1| polar amino acid uptake ABC transporter, PAAT family, permease protein [Burkholderia pseudomallei 406e] gi|184211531|gb|EDU08574.1| polar amino acid uptake ABC transporter, PAAT family, permease protein [Burkholderia pseudomallei 1655] gi|254217047|gb|EET06431.1| polar amino acid uptake ABC transporter, PAAT family, permease protein [Burkholderia pseudomallei 1710a] gi|288279724|gb|EEC36457.2| polar amino acid uptake ABC transporter, PAAT family, permease protein [Burkholderia pseudomallei 576] Length = 219 Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 58/207 (28%), Positives = 105/207 (50%), Gaps = 14/207 (6%) Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247 K V S VLG+++ L L R + A+ Y+S L+ G P LV + + +++ Sbjct: 23 KFAVASMVLGLIVGLLVA-LVRIGSNRLLSAIAQGYVS--LMRGTPLLVQM---FVVYYG 76 Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307 P +G ++ P ++ L+ A+++E +R ++ + RGQ A+ +LGLTH Sbjct: 77 LPDIG-------ISLDPTAAGIF-TLTLNAGAYLSESMRGAILGIGRGQWAASHSLGLTH 128 Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367 + R V+ PQA+R +P L + ++L+K++SL + +L+ +I T Q + + Sbjct: 129 VQTLRHVICPQALRLAVPSLGNTLISLIKDTSLVSVITVTELLRSTQEVIASTFQPLPLY 188 Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIAL 394 L IY LS ++A R+ + AL Sbjct: 189 LAAAAIYWVLSTLLARLQGRIETRCAL 215 Score = 37.7 bits (86), Expect = 3.3, Method: Compositional matrix adjust. Identities = 28/96 (29%), Positives = 45/96 (46%), Gaps = 12/96 (12%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151 G T A + M+ I+G LV R+ +N+L++ I + YV + R P LV +F +Y Sbjct: 17 GAALTMKFAVASMVLGLIVGLLVALVRIGSNRLLSAIAQGYVSLMRGTPLLVQMFVVYYG 76 Query: 152 VLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187 +PD G+ L+ TLT++ A Sbjct: 77 ------LPD------IGISLDPTAAGIFTLTLNAGA 100 >gi|331702001|ref|YP_004398960.1| polar amino acid ABC transporter inner membrane subunit [Lactobacillus buchneri NRRL B-30929] gi|329129344|gb|AEB73897.1| polar amino acid ABC transporter, inner membrane subunit [Lactobacillus buchneri NRRL B-30929] Length = 221 Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 64/190 (33%), Positives = 92/190 (48%), Gaps = 28/190 (14%) Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252 SF+L ++L LF T L++ H K +IS + G+P LVL+ + Y Sbjct: 39 SFILSLILGLFLT-LAQLSHHKLLHYPARAFIS--FMRGVPMLVLLFIIY---------- 85 Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312 F F + + IA + +AF++E+ RS AV GQ EAA +LGL +RK Sbjct: 86 -FGFRADALPAA-----VIAFTINCSAFVSEVYRSSFSAVDHGQWEAAYSLGLPYRKVIS 139 Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLA----VAVGFADLVSVGGTIINQTGQAIEI-- 366 ++ PQA R IP L + L+L K +SLA V+ F D V G NQ I I Sbjct: 140 KIVFPQAFRIAIPALGNILLDLFKGTSLAAMITVSEMFMDAQIVAGA--NQDYMTIYITI 197 Query: 367 -ILIWMFIYL 375 ++ W F +L Sbjct: 198 AVVYWFFCWL 207 >gi|257069404|ref|YP_003155659.1| amino acid ABC transporter membrane protein [Brachybacterium faecium DSM 4810] gi|256560222|gb|ACU86069.1| amino acid ABC transporter membrane protein [Brachybacterium faecium DSM 4810] Length = 224 Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 33/69 (47%), Positives = 48/69 (69%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IALS Y A+F+ E +RSG+ VP GQ EAA A+GL+ A R+++LPQA+R + PL + Sbjct: 98 IALSLYHASFVCEAIRSGVNTVPLGQAEAARAIGLSFLPAARIIVLPQALRGAVTPLGNT 157 Query: 331 YLNLLKNSS 339 + L KN++ Sbjct: 158 LIALTKNTT 166 >gi|188534833|ref|YP_001908630.1| Putative amino-acid transport system permease protein [Erwinia tasmaniensis Et1/99] gi|188029875|emb|CAO97759.1| Putative amino-acid transport system permease protein [Erwinia tasmaniensis Et1/99] Length = 227 Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 57/201 (28%), Positives = 102/201 (50%), Gaps = 14/201 (6%) Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252 +F LG+ L L+R + + ++L Y+ +LI G P LV + L + Sbjct: 30 AFTLGLSLGAVVA-LARLYGPRPLQSLVRFYV--WLIRGTPLLVQLFLIF---------- 76 Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312 + G F + I + A+ +EI+R+ L++VP+GQ EAA ++G++ + R Sbjct: 77 -YALPGVGITIDAFPAAVIGFTLNIGAYTSEIIRATLLSVPKGQWEAAHSIGMSWSQTLR 135 Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372 +++PQA R +PPL++ ++ L+K++SLA + +L I T Q + + Sbjct: 136 RIIMPQAARVAVPPLSNTFIALVKDTSLASVITVPELFLAAQRIAAVTYQPLILYTEAAI 195 Query: 373 IYLSLSIMIALFMNRLNAKIA 393 IYL LS +++ RL K+A Sbjct: 196 IYLLLSSVLSALQARLEKKLA 216 >gi|117620598|ref|YP_858703.1| amino-acid ABC transporter permease protein YckJ [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117562005|gb|ABK38953.1| probable amino-acid ABC transporter permease protein YckJ [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 222 Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 44/132 (33%), Positives = 81/132 (61%), Gaps = 10/132 (7%) Query: 219 LPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTA 278 L +LYIS F G P LV + L L++ P L F+G F + + L+ + A Sbjct: 55 LAMLYISFFR--GTPLLVQLFL---LYYGLPQLFPI-FVGMDA----FTAAIVGLTLHFA 104 Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338 A++AE +R+ +I + + QMEAA+++G++ +A + ++LPQA R P L + +++++K++ Sbjct: 105 AYMAESIRASIIGIHKSQMEAALSIGMSRYQAMQRIILPQAARIATPSLMNYFIDMIKST 164 Query: 339 SLAVAVGFADLV 350 SLA +G A+++ Sbjct: 165 SLAFTLGVAEIM 176 >gi|114565875|ref|YP_753029.1| putative ABC transporter permease [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|114336810|gb|ABI67658.1| putative ABC transporter permease protein [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 213 Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 36/118 (30%), Positives = 71/118 (60%), Gaps = 1/118 (0%) Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326 M+ Y+A +A++AEI R+G+ ++ RGQ EAA LGL+ + ++LPQ + ++PP Sbjct: 85 MAAYLAFVLNYSAYLAEIFRAGIQSIDRGQYEAADVLGLSRYQTMTNIILPQVFKRVLPP 144 Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 + ++ +NL+K+++L + ++L V T + + I ++ +F YL ++ M+ F Sbjct: 145 IGNEVINLVKDTALVYVLAISELSRVARTHVMRDDTFIPFLIAAIF-YLMMTGMVQRF 201 >gi|87120915|ref|ZP_01076807.1| ABC-type amino acid transport system, permease component [Marinomonas sp. MED121] gi|86163753|gb|EAQ65026.1| ABC-type amino acid transport system, permease component [Marinomonas sp. MED121] Length = 371 Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 39/119 (32%), Positives = 70/119 (58%), Gaps = 3/119 (2%) Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 +AA AEI+R+GL A+P GQ EA+ ALG+ + + +V++PQ ++ IP + + ++ + K Sbjct: 249 SAASKAEIIRAGLQAIPVGQFEASAALGVGYWRTMSMVIMPQVLKVSIPAMLNSFIGMFK 308 Query: 337 NSSLAVAVGFADLVSVGGTIIN--QTGQ-AIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 ++SL +G D +SVG +N + G+ IE+ + IY + I+ F L ++ Sbjct: 309 DTSLVAIIGLLDFLSVGMATMNSDEWGKYGIEVYIFVAMIYFVILFTISRFSLTLEKQL 367 >gi|119387802|ref|YP_918836.1| polar amino acid ABC transporter, inner membrane subunit [Paracoccus denitrificans PD1222] gi|119378377|gb|ABL73140.1| amino acid ABC transporter membrane protein 2, PAAT family [Paracoccus denitrificans PD1222] Length = 218 Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 42/117 (35%), Positives = 63/117 (53%) Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 +A++ EI R + AVP GQ EAA AL L+++ R V+LPQAMR P + L+K Sbjct: 98 SAYLGEIWRGAIEAVPPGQTEAATALSLSYKDRMRHVVLPQAMRLATAPTVGFLVQLIKG 157 Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394 +SLA +GF +L G I N T + + +Y L ++L R+ A++ L Sbjct: 158 TSLASIIGFTELTRAGQIINNATFKPFLVFGTVAALYFVLCWPLSLLARRMEARMRL 214 >gi|317401750|gb|EFV82369.1| amino acid ABC transporter permease [Achromobacter xylosoxidans C54] Length = 218 Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 39/129 (30%), Positives = 69/129 (53%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P +++ AL+ ++ AF+AEI R + A+P+GQ EA+ +L L + + R V+LPQA+R Sbjct: 84 PPWLAAGAALTLWSGAFLAEIWRGCVEAIPKGQWEASASLALGYVQQMRYVVLPQALRIA 143 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 + P + ++K+++L +GF +L I N T + IY +L ++ Sbjct: 144 VAPTVGFAVQIVKSTALTSIIGFTELSKASTVITNATFSPFTVYACAALIYFALCWPLSR 203 Query: 384 FMNRLNAKI 392 RL K+ Sbjct: 204 LSLRLERKL 212 >gi|259909372|ref|YP_002649728.1| Putative amino acid ABC transporter, permease protein [Erwinia pyrifoliae Ep1/96] gi|224964994|emb|CAX56522.1| Putative amino acid ABC transporter, permease protein [Erwinia pyrifoliae Ep1/96] Length = 218 Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 38/108 (35%), Positives = 63/108 (58%), Gaps = 1/108 (0%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G +SP + + +AL+CYT+AF+ +I + A+P+GQ EA LGL+ + V+LPQ Sbjct: 80 GIDLSP-WAAAALALTCYTSAFLVDIWYGSIKALPKGQWEACRCLGLSSGQTLFRVVLPQ 138 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 A+R I P + ++K ++LA +GF +L G + N T Q ++ Sbjct: 139 ALRVAIAPTVGFAVQVVKGTALASIIGFIELTKAGTILNNVTYQPFKV 186 >gi|153011069|ref|YP_001372283.1| polar amino acid ABC transporter, inner membrane subunit [Ochrobactrum anthropi ATCC 49188] gi|151562957|gb|ABS16454.1| polar amino acid ABC transporter, inner membrane subunit [Ochrobactrum anthropi ATCC 49188] Length = 222 Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 46/153 (30%), Positives = 84/153 (54%), Gaps = 7/153 (4%) Query: 233 PTLVLIALKYQLHFDKPVLGQFNFI------GGSTVSPEFMSLYIALSCYTAAFIAEIVR 286 P ++I ++ + P L Q FI G +SP +L +AL A+ EI+R Sbjct: 51 PVRLIIDAYIEIIRNTPFLVQIFFIFFGLPSAGLRLSPNSAAL-LALVVNFGAYGTEIIR 109 Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346 +G+ ++ +GQ+EA ALGL+ + R V++ A+R++ P LTSQ++ L+ SS+ + Sbjct: 110 AGIESIHKGQVEAGTALGLSKLQVFRYVIMKPALRTVYPSLTSQFIYLMLTSSVVSVISA 169 Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379 +L + G + + T + E+ ++ +YL +SI Sbjct: 170 NELAAAGNDLQSATFASFEVYIVITLMYLVMSI 202 Score = 39.3 bits (90), Expect = 0.96, Method: Compositional matrix adjust. Identities = 22/61 (36%), Positives = 33/61 (54%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +LVG T L+ + M+ I+ + G+ S K V I Y+E+ RN P LV IFF+ Sbjct: 16 LLVGAWQTIELSCAAMVLGLIVSIVCALGKTSGPKPVRLIIDAYIEIIRNTPFLVQIFFI 75 Query: 149 Y 149 + Sbjct: 76 F 76 >gi|53725952|ref|YP_103705.1| His/Glu/Gln/Arg/opine ABC transporter permease [Burkholderia mallei ATCC 23344] gi|67643969|ref|ZP_00442712.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Burkholderia mallei GB8 horse 4] gi|121601039|ref|YP_992121.1| polar amino acid ABC transporter permease [Burkholderia mallei SAVP1] gi|124386639|ref|YP_001028567.1| polar amino acid ABC transporter permease [Burkholderia mallei NCTC 10229] gi|126450004|ref|YP_001081536.1| polar amino acid ABC transporter permease [Burkholderia mallei NCTC 10247] gi|166998336|ref|ZP_02264196.1| polar amino acid uptake ABC transporter, PAAT family, permease protein [Burkholderia mallei PRL-20] gi|254175602|ref|ZP_04882262.1| polar amino acid uptake ABC transporter, PAAT family, permease protein [Burkholderia mallei ATCC 10399] gi|254202403|ref|ZP_04908766.1| polar amino acid uptake ABC transporter, PAAT family, permease protein [Burkholderia mallei FMH] gi|254207734|ref|ZP_04914084.1| polar amino acid uptake ABC transporter, PAAT family, permease protein [Burkholderia mallei JHU] gi|254356366|ref|ZP_04972642.1| polar amino acid uptake ABC transporter, PAAT family, permease protein [Burkholderia mallei 2002721280] gi|52429375|gb|AAU49968.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Burkholderia mallei ATCC 23344] gi|121229849|gb|ABM52367.1| polar amino acid uptake ABC transporter, PAAT family, permease protein [Burkholderia mallei SAVP1] gi|124294659|gb|ABN03928.1| polar amino acid uptake ABC transporter, PAAT family, permease protein [Burkholderia mallei NCTC 10229] gi|126242874|gb|ABO05967.1| polar amino acid uptake ABC transporter, PAAT family, permease protein [Burkholderia mallei NCTC 10247] gi|147746650|gb|EDK53727.1| polar amino acid uptake ABC transporter, PAAT family, permease protein [Burkholderia mallei FMH] gi|147751628|gb|EDK58695.1| polar amino acid uptake ABC transporter, PAAT family, permease protein [Burkholderia mallei JHU] gi|148025363|gb|EDK83517.1| polar amino acid uptake ABC transporter, PAAT family, permease protein [Burkholderia mallei 2002721280] gi|160696646|gb|EDP86616.1| polar amino acid uptake ABC transporter, PAAT family, permease protein [Burkholderia mallei ATCC 10399] gi|238525444|gb|EEP88872.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Burkholderia mallei GB8 horse 4] gi|243065405|gb|EES47591.1| polar amino acid uptake ABC transporter, PAAT family, permease protein [Burkholderia mallei PRL-20] Length = 219 Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 58/207 (28%), Positives = 105/207 (50%), Gaps = 14/207 (6%) Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247 K V S VLG+++ L L R + A+ Y+S L+ G P LV + + +++ Sbjct: 23 KFAVASMVLGLIVGLLVA-LVRIGSNRLLSAIAQGYVS--LMRGTPLLVQM---FVVYYG 76 Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307 P +G ++ P ++ L+ A+++E +R ++ + RGQ A+ +LGLTH Sbjct: 77 LPDIG-------ISLDPTAAGIF-TLTLNAGAYLSENMRGAILGIGRGQWAASHSLGLTH 128 Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367 + R V+ PQA+R +P L + ++L+K++SL + +L+ +I T Q + + Sbjct: 129 VQTLRHVICPQALRLAVPSLGNTLISLIKDTSLVSVITVTELLRSTQEVIASTFQPLPLY 188 Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIAL 394 L IY LS ++A R+ + AL Sbjct: 189 LAAAAIYWVLSTLLARLQGRIETRCAL 215 Score = 37.7 bits (86), Expect = 3.6, Method: Compositional matrix adjust. Identities = 28/96 (29%), Positives = 45/96 (46%), Gaps = 12/96 (12%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151 G T A + M+ I+G LV R+ +N+L++ I + YV + R P LV +F +Y Sbjct: 17 GAALTMKFAVASMVLGLIVGLLVALVRIGSNRLLSAIAQGYVSLMRGTPLLVQMFVVYYG 76 Query: 152 VLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187 +PD G+ L+ TLT++ A Sbjct: 77 ------LPD------IGISLDPTAAGIFTLTLNAGA 100 >gi|330951075|gb|EGH51335.1| amino acid ABC transporter permease [Pseudomonas syringae Cit 7] Length = 277 Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 46/119 (38%), Positives = 74/119 (62%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IALS A+++EI R+G+I V GQ EAA+AL L + V LPQAMR+IIPP T+Q Sbjct: 148 IALSLNYGAYLSEIFRAGIIGVSAGQREAALALALRPAQIFWRVTLPQAMRTIIPPTTNQ 207 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 ++++LK+SSL +G +++ + + + + IE++ +Y +SI + L +RL Sbjct: 208 FISMLKDSSLISVMGVWEVMFLAQSYGRSSYRYIEMLTTAAVLYWIMSIGLELLQSRLE 266 >gi|302531068|ref|ZP_07283410.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces sp. AA4] gi|302439963|gb|EFL11779.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces sp. AA4] Length = 246 Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 37/122 (30%), Positives = 75/122 (61%), Gaps = 5/122 (4%) Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339 +I EI R+G+ +V +GQ+EA+ ALG+++ KA LV++PQ +R ++P L +Q++ L+K+S+ Sbjct: 112 YIGEIFRAGIQSVDKGQLEASRALGMSYTKAMLLVVIPQGVRRVLPALVNQFIALVKDST 171 Query: 340 LAVAVGF----ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395 L +GF +L +G + TG ++ + +YL +++ + +N ++ ++ Sbjct: 172 LVYFLGFLTSQRELFRIGQDLAANTGNLSPLVAAGV-VYLVITVPLTHLVNYIDKRLQTG 230 Query: 396 EK 397 K Sbjct: 231 RK 232 Score = 39.7 bits (91), Expect = 0.75, Method: Compositional matrix adjust. Identities = 18/61 (29%), Positives = 34/61 (55%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151 G +NT L+ + I T++G ++ LS + + W RVY ++FR +P ++ I + + Sbjct: 25 GLLNTLILSVAAAIIGTLLGMVLAVMGLSTKRWLRWPARVYTDIFRGLPAILTILVIGQG 84 Query: 152 V 152 V Sbjct: 85 V 85 >gi|312278252|gb|ADQ62909.1| Amino acid (Glutamine) ABC transporter, permease protein [Streptococcus thermophilus ND03] Length = 213 Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 33/91 (36%), Positives = 57/91 (62%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +A + AA+ AEI R G++A+P+GQ EAA L L+ + R ++LPQ ++ ++P + ++ Sbjct: 89 LAFTLNYAAYFAEIFRGGILAIPKGQYEAAKMLKLSSFQTIRYIILPQVVKIVLPSIFNE 148 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361 +NL+K+SSL +G DL+ T N+ Sbjct: 149 IINLVKDSSLVYVLGVGDLLLESRTAANRDA 179 >gi|170735289|ref|YP_001774403.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia cenocepacia MC0-3] gi|169821327|gb|ACA95908.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia cenocepacia MC0-3] Length = 225 Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 46/128 (35%), Positives = 69/128 (53%), Gaps = 4/128 (3%) Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282 Y T + G+P +++ + Y F L F G +SP F + IAL+ A+ + Sbjct: 52 YALTNFLRGIPEFLILLICY---FGLSHLLNAQFDGAIVISP-FSAGVIALAVVFGAYAS 107 Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342 E+ R IAVP GQ+EAA A G++ + V LPQA R +P L + + NLLK++SL Sbjct: 108 EMFRGAFIAVPAGQIEAARAYGMSRLQTLWHVRLPQAWRICLPSLNNMWQNLLKDTSLVS 167 Query: 343 AVGFADLV 350 VG D++ Sbjct: 168 IVGLEDML 175 >gi|62185155|ref|YP_219940.1| ABC transporter, membrane permease [Chlamydophila abortus S26/3] gi|62148222|emb|CAH63981.1| ABC transporter, membrane permease [Chlamydophila abortus S26/3] Length = 215 Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 55/189 (29%), Positives = 100/189 (52%), Gaps = 18/189 (9%) Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFN 255 LG+++ T SR+F + + L LY++ +I G P + I + Y F P + + + Sbjct: 32 LGVII---GTMTSRYFPCRITRCLGNLYVT--VIRGTPLFIQILIFY---FGLPSIIRLD 83 Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315 M+ IALS ++A++AE +R G+ A+ GQ E+A LG + ++ Sbjct: 84 -------PTPLMAGLIALSINSSAYLAENIRGGINALSVGQWESAKVLGYKKSQIFFYII 136 Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375 PQ ++I+P LT++++ L+K SS+ + VG +L V I+++ +E+ I +YL Sbjct: 137 YPQVFKNILPSLTNEFVALIKESSILMVVGVPELTKVSKDIVSRELNPMEMYSICAALYL 196 Query: 376 SLSIMIALF 384 +M +LF Sbjct: 197 ---LMTSLF 202 >gi|309776367|ref|ZP_07671354.1| arginine transport system permease protein ArtQ [Erysipelotrichaceae bacterium 3_1_53] gi|308915886|gb|EFP61639.1| arginine transport system permease protein ArtQ [Erysipelotrichaceae bacterium 3_1_53] Length = 217 Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 33/122 (27%), Positives = 73/122 (59%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + S + A+++EI+R+G+ + +GQ+EAA ALG++ + +++PQA R+++P + ++ Sbjct: 93 LVFSLNSGAYMSEIMRAGIDGIDKGQIEAAKALGVSGTDIAKDIIIPQAFRNVLPAVINE 152 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++ L K +S+ +G D++ + NQT E +LI +Y ++ +++L + Sbjct: 153 FITLTKETSIVSVLGLHDMMYWFYAVKNQTYADFEPLLIVFLVYYIMNKILSLIGKMIER 212 Query: 391 KI 392 K+ Sbjct: 213 KL 214 >gi|152970451|ref|YP_001335560.1| glutamate/aspartate ABC transporter membrane protein [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|150955300|gb|ABR77330.1| glutamate/aspartate transport protein (ABC superfamily, membrane) [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] Length = 308 Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 37/134 (27%), Positives = 76/134 (56%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 +F + + L+ +A+ AEI+R G + V GQ EAA ALGL + T ++LPQA+R+I+ Sbjct: 146 QFSTAVVGLTLVQSAYTAEIIRGGFLGVDHGQYEAAAALGLPAWRRTLRIILPQALRTIL 205 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 P ++ ++L K +++ + +L I N+T + I ++++ YL+++ +++ Sbjct: 206 PSGFNEIISLAKGTAMVYVLAMPELFYTIQMIYNRTQEVIPLLMVGAAWYLAITSVLSAI 265 Query: 385 MNRLNAKIALKEKK 398 + +A E++ Sbjct: 266 QYLVERGLARSERR 279 >gi|302188038|ref|ZP_07264711.1| polar amino acid ABC transporter, inner membrane subunit [Pseudomonas syringae pv. syringae 642] Length = 215 Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 40/133 (30%), Positives = 73/133 (54%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F++ + L TAA +AEI R L+A+P GQ EA+ LGL R V++PQ R +P Sbjct: 83 FVAAMLGLGLITAANLAEIYRGALLAIPHGQREASHVLGLGFRDRAMSVMVPQVFRYSLP 142 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 ++ + LLK++++A +G ++ V + QT + +EI + +YL +S +A Sbjct: 143 ACSTYAIGLLKDTAIASTIGVPEVAQVAYQLSQQTFKGLEIYALAGCLYLLVSFAMAWLS 202 Query: 386 NRLNAKIALKEKK 398 ++A + + ++ Sbjct: 203 RTVDANLRARIER 215 >gi|283479444|emb|CAY75360.1| putative ABC transport system, inner membrane component [Erwinia pyrifoliae DSM 12163] Length = 225 Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 38/108 (35%), Positives = 63/108 (58%), Gaps = 1/108 (0%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G +SP + + +AL+CYT+AF+ +I + A+P+GQ EA LGL+ + V+LPQ Sbjct: 87 GIDLSP-WAAAALALTCYTSAFLVDIWYGSIKALPKGQWEACRCLGLSSGQTLFRVVLPQ 145 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 A+R I P + ++K ++LA +GF +L G + N T Q ++ Sbjct: 146 ALRVAIAPTVGFAVQVVKGTALASIIGFIELTKAGTILNNVTYQPFKV 193 >gi|163795108|ref|ZP_02189076.1| polar amino acid uptake family ABC transporter, permease protein [alpha proteobacterium BAL199] gi|159179506|gb|EDP64035.1| polar amino acid uptake family ABC transporter, permease protein [alpha proteobacterium BAL199] Length = 239 Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 40/122 (32%), Positives = 68/122 (55%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 ++LS + AF EI RSG+ AVP EAA ALG +A ++LP A R +P L + Sbjct: 111 VSLSFFAGAFNVEIFRSGIEAVPESTREAAEALGYNRLQAYLYIVLPLAFRVCLPALNNN 170 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 +NL+K ++LA A+ +L+ V I + + E+++ + +Y++L ++ M+R Sbjct: 171 LVNLVKTTTLAYAIAVPELLYVSNQIWSDSVNVPEMMVTLLVLYVALVGLLVWGMHRWER 230 Query: 391 KI 392 I Sbjct: 231 AI 232 Score = 43.5 bits (101), Expect = 0.052, Method: Compositional matrix adjust. Identities = 30/82 (36%), Positives = 49/82 (59%), Gaps = 6/82 (7%) Query: 79 YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRV---YVEV 135 Y DS ++ GF T WL+ + +TIIG +VGA L ++ V W R+ Y+++ Sbjct: 12 YFYDSFDRARMIGGFFMTIWLSLVCLFFSTIIG-VVGAW-LQGSRFV-WTRRIAQGYIQL 68 Query: 136 FRNIPPLVVIFFLYKSVLSVLP 157 FRN PPLV ++F + ++ ++LP Sbjct: 69 FRNTPPLVQMYFFFFALGNLLP 90 >gi|71737879|ref|YP_273293.1| amino acid ABC transporter permease [Pseudomonas syringae pv. phaseolicola 1448A] gi|257482032|ref|ZP_05636073.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tabaci ATCC 11528] gi|71558432|gb|AAZ37643.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. phaseolicola 1448A] gi|320325714|gb|EFW81775.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. glycinea str. B076] gi|320327367|gb|EFW83381.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. glycinea str. race 4] gi|330881565|gb|EGH15714.1| amino acid ABC transporter permease [Pseudomonas syringae pv. glycinea str. race 4] gi|330887840|gb|EGH20501.1| amino acid ABC transporter permease [Pseudomonas syringae pv. mori str. 301020] gi|331008890|gb|EGH88946.1| amino acid ABC transporter permease [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 277 Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 46/119 (38%), Positives = 74/119 (62%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IALS A+++EI R+G+I V GQ EAA+AL L + V LPQAMR+IIPP T+Q Sbjct: 148 IALSLNYGAYLSEIFRAGIIGVAAGQREAALALALRPAQIFWRVTLPQAMRTIIPPTTNQ 207 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 ++++LK+SSL +G +++ + + + + IE++ +Y +SI + L +RL Sbjct: 208 FISMLKDSSLISVMGVWEVMFLAQSYGRSSYRYIEMLTTAAVLYWIMSIGLELLQSRLE 266 >gi|317053173|ref|YP_004119527.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea sp. At-9b] gi|316953500|gb|ADU72971.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea sp. At-9b] Length = 229 Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 37/123 (30%), Positives = 70/123 (56%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I++ AA++ EI+RSGL +V Q EAA+ L ++ + R V++PQ++ +IPP S Sbjct: 102 ISVCIIAAAYLGEIIRSGLESVHHNQWEAAVTLNFSYLQTLRYVIIPQSLTVVIPPTFSF 161 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++ +K+++LA +G +L S + ++ A + + + +Y +S ++ RL Sbjct: 162 FVMYIKDTTLASQIGVMELTSASKILSDKGYSATLVYAVVLMLYFIVSYPLSRLGKRLER 221 Query: 391 KIA 393 KIA Sbjct: 222 KIA 224 >gi|257387739|ref|YP_003177512.1| polar amino acid ABC transporter inner membrane subunit [Halomicrobium mukohataei DSM 12286] gi|257170046|gb|ACV47805.1| polar amino acid ABC transporter, inner membrane subunit [Halomicrobium mukohataei DSM 12286] Length = 238 Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 36/121 (29%), Positives = 73/121 (60%), Gaps = 3/121 (2%) Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 + A+ +++ R + ++ GQME A ++G++ +A R V+ PQA+R IP +++ +LK Sbjct: 113 SGAYQSQVFRGAIQSISEGQMEGARSIGMSKLQAIRHVIFPQAIRRSIPGFQNEFTIVLK 172 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQA---IEIILIWMFIYLSLSIMIALFMNRLNAKIA 393 ++S+A A+G A+L++ + Q G+ +E+IL IY L++ ++RL+ + A Sbjct: 173 DTSVAFAIGLAELLTRAENLYLQPGRGTAVMEVILTITAIYFVLTVATNRTLDRLHDRYA 232 Query: 394 L 394 + Sbjct: 233 I 233 >gi|254438844|ref|ZP_05052338.1| ABC transporter, permease protein [Octadecabacter antarcticus 307] gi|198254290|gb|EDY78604.1| ABC transporter, permease protein [Octadecabacter antarcticus 307] Length = 790 Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 41/115 (35%), Positives = 67/115 (58%), Gaps = 9/115 (7%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I ++ + AA+IAE++R GL A+ GQ E A +LGL++ ++ +L++LPQAM+ IP + + Sbjct: 661 IMVTLFAAAYIAEVIRGGLAALATGQYEGADSLGLSYWQSMQLIVLPQAMKISIPGIVNT 720 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI-ALF 384 ++ L K++ L V +G +D + I T W IY L + I ALF Sbjct: 721 FIGLFKDTVLVVFIGLSDPIGFSNLIRADTD--------WNGIYWELFVFIGALF 767 >gi|169334791|ref|ZP_02861984.1| hypothetical protein ANASTE_01197 [Anaerofustis stercorihominis DSM 17244] gi|169257529|gb|EDS71495.1| hypothetical protein ANASTE_01197 [Anaerofustis stercorihominis DSM 17244] Length = 222 Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 57/204 (27%), Positives = 99/204 (48%), Gaps = 21/204 (10%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVL-IALKYQLHFDKP 249 +FS V+GI S + F+ + PLL F+ FGLP L+ + ++L Sbjct: 37 LFSCVMGIS-SFKPFKAISKFYLWLIRGTPLLVQCFFVYFGLPQLIQSFGIDFRLT---- 91 Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309 + + I LS A+++EI R G+ AV +GQMEAA +LGL + Sbjct: 92 ---------------AYSAGIITLSLNAGAYMSEIFRGGIQAVDKGQMEAARSLGLPKGR 136 Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369 A V+LPQA++ IP L +Q++ LK++S+ + A++V I +T + + Sbjct: 137 AMIKVILPQALKICIPSLVNQFIITLKDTSIISTISLAEVVYAANIYIGRTMNSFATWTL 196 Query: 370 WMFIYLSLSIMIALFMNRLNAKIA 393 +YL + +++ N + +I+ Sbjct: 197 VGLMYLVVVTLLSSLSNYIERRIS 220 >gi|187919547|ref|YP_001888578.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia phytofirmans PsJN] gi|187717985|gb|ACD19208.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia phytofirmans PsJN] Length = 216 Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 47/125 (37%), Positives = 70/125 (56%), Gaps = 1/125 (0%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G VSP +L A+S +A++IAEI+R G ++VP G +EAA LGL+ R +L+PQ Sbjct: 81 GINVSPIVAALS-AVSLCSASYIAEILRGGFLSVPPGHLEAARMLGLSPFDMLRRILVPQ 139 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378 A R +P L ++ + L+K SSL VG A+L I T + +E + IY + Sbjct: 140 AFRLTLPSLVNEMVLLIKASSLISVVGVAELTRTAQNIAASTYRPLEAYVAAGLIYFVIC 199 Query: 379 IMIAL 383 +AL Sbjct: 200 GALAL 204 >gi|322516947|ref|ZP_08069840.1| polar amino acid uptake ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus vestibularis ATCC 49124] gi|322124492|gb|EFX95983.1| polar amino acid uptake ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus vestibularis ATCC 49124] Length = 213 Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 33/91 (36%), Positives = 57/91 (62%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +A + AA+ AEI R G++A+P+GQ EAA L L+ + R ++LPQ ++ ++P + ++ Sbjct: 89 LAFTLNYAAYFAEIFRGGILAIPKGQYEAAKMLKLSSFQTIRYIILPQVVKIVLPSIFNE 148 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361 +NL+K+SSL +G DL+ T N+ Sbjct: 149 IINLVKDSSLVYVLGVGDLLLESRTAANRDA 179 >gi|327395224|dbj|BAK12646.1| inner membrane amino-acid ABC transporter permease protein YecS [Pantoea ananatis AJ13355] Length = 308 Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 38/129 (29%), Positives = 75/129 (58%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 +F + I L+ AA+ AEI+R G + V GQ+EAA ALGL+ + T ++LPQA+R+II Sbjct: 146 QFPAAVIGLTLVQAAYSAEIIRGGFLGVDHGQVEAASALGLSASRRTFRIILPQALRAII 205 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 P ++ ++L K +++ + +L I N+ + I ++++ YL ++ ++++ Sbjct: 206 PTAFNEIISLAKGTAMVYVLAMPELFYTIQMIYNRNQEVIPLLMVGAAWYLIITTVLSVI 265 Query: 385 MNRLNAKIA 393 + + +A Sbjct: 266 QHSVERWLA 274 >gi|295699404|ref|YP_003607297.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia sp. CCGE1002] gi|295438617|gb|ADG17786.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. CCGE1002] Length = 257 Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 41/123 (33%), Positives = 70/123 (56%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 E + +A+S A+ EIVR+G+ ++ RGQ++AA ALGL R+ R V+LPQA+ ++ Sbjct: 89 EVQAAILAMSVNLGAYATEIVRAGIDSISRGQVQAAQALGLQGRQVFRYVVLPQALANVF 148 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 P L Q L ++ S++ + DL I ++ ++ E +I YL +SI++ Sbjct: 149 PALLGQVLIVMLGSAVVSQISVPDLTYAANFIQSRNFRSFESYVIITATYLLMSIVLRQL 208 Query: 385 MNR 387 +NR Sbjct: 209 LNR 211 >gi|27377336|ref|NP_768865.1| amino acid ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] gi|27350480|dbj|BAC47490.1| amino acid ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] Length = 217 Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 52/168 (30%), Positives = 89/168 (52%), Gaps = 11/168 (6%) Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287 +I G+P +VL+ + L+F P LG + S + + L IA S Y A E R+ Sbjct: 61 VIRGIPIIVLL---FYLYFVMPDLG----VTLSALQAAILGLGIAYSAYQA----ENFRA 109 Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347 G+ A+ +GQ+EAA ++G+ R V+LPQA+R ++PP + + +LK+SS A + A Sbjct: 110 GIEAIDKGQIEAAQSIGMGWWLTMRRVVLPQAVRIVLPPYGNVMIMMLKDSSQASTITVA 169 Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395 +L G I + T + + + +YL++SI + L + + K Sbjct: 170 ELALQGKLIASSTFKNTSVFTLVALMYLTMSIPLILLVRHFEKRAGKK 217 >gi|53729251|ref|ZP_00133781.2| COG0765: ABC-type amino acid transport system, permease component [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|126209068|ref|YP_001054293.1| amino acid ABC transporter permease [Actinobacillus pleuropneumoniae L20] gi|126097860|gb|ABN74688.1| hypothetical amino-acid ABC transporter permease protein [Actinobacillus pleuropneumoniae serovar 5b str. L20] Length = 227 Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 56/211 (26%), Positives = 109/211 (51%), Gaps = 25/211 (11%) Query: 193 SFVLGIVLS-----LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247 SF++G+ ++ + T ++ H + A+ +YIS +I G P LV I++ + + Sbjct: 31 SFIIGMAIAVGVALIRVTPVNGMLH-RIALAIVKVYIS--IIRGTPMLVQISVVF---YG 84 Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307 P +G + + P + I S A+ +E VR+ + +VP+GQ EA +G+T+ Sbjct: 85 LPAIGVY-------IDP-IPAAIIGFSLNIGAYGSETVRAAISSVPKGQWEAGYTIGMTY 136 Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI- 366 + R ++ PQA+R +IPPL++ ++ L K++SLA V ++ V + N + + + Sbjct: 137 MQTFRRIIAPQAIRVVIPPLSNTFIGLFKDTSLASVVTVTEMFRVAQQMANMSYDFLPVY 196 Query: 367 ----ILIWMFIYLSLSIMIALFMNRLNAKIA 393 ++ W F ++ L ++ A R N +A Sbjct: 197 IEAGLIYWCFCWV-LFLIQAKLERRFNCFVA 226 >gi|207722317|ref|YP_002252753.1| hypothetical protein RSMK04914 [Ralstonia solanacearum MolK2] gi|206587494|emb|CAQ18076.1| hypothetical protein RSMK04914 [Ralstonia solanacearum MolK2] Length = 143 Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 37/106 (34%), Positives = 62/106 (58%) Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335 Y AF +E +R+G+ AVP GQ+ AA++LG T A ++LPQA+R PL Q N L Sbjct: 10 YAGAFCSEELRAGIRAVPHGQLNAALSLGFTPHAAFVRIVLPQALRVAALPLLGQCANTL 69 Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 KN+SLA+ +G A+L + + A + + +Y ++++++ Sbjct: 70 KNTSLAMGIGLAELSYSARQVETDSLLAFQAFAVATLLYAAVTLLL 115 >gi|172062269|ref|YP_001809920.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria MC40-6] gi|171994786|gb|ACB65704.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria MC40-6] Length = 223 Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 41/112 (36%), Positives = 66/112 (58%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +AL AF AE R+G+ AVP+ ++AA+ALGL + T V+LPQA+R+ +P L + Sbjct: 96 LALGLNLTAFNAEAYRAGVQAVPKEHLDAAVALGLRPWQRTIFVVLPQALRTAMPVLLTN 155 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382 + L+ S+L V ADL+ V +I + + +E + +Y +LS+ IA Sbjct: 156 GIGSLQQSALVAIVAVADLMYVAKSIATEAYRPLETYSVVALVYFALSLPIA 207 >gi|330988581|gb|EGH86684.1| amino acid ABC transporter permease [Pseudomonas syringae pv. lachrymans str. M301315] Length = 277 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 46/119 (38%), Positives = 74/119 (62%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IALS A+++EI R+G+I V GQ EAA+AL L + V LPQAMR+IIPP T+Q Sbjct: 148 IALSLNYGAYLSEIFRAGIIGVAAGQREAALALALRPAQIFWRVTLPQAMRTIIPPTTNQ 207 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 ++++LK+SSL +G +++ + + + + IE++ +Y +SI + L +RL Sbjct: 208 FISMLKDSSLISVMGVWEVMFLAQSYGRSSYRYIEMLTTAAVLYWIMSIGLELLQSRLE 266 >gi|307129013|ref|YP_003881029.1| putative transporter membrane protein [Dickeya dadantii 3937] gi|306526542|gb|ADM96472.1| predicted transporter subunit: membrane component of ABC superfamily [Dickeya dadantii 3937] Length = 221 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 52/199 (26%), Positives = 100/199 (50%), Gaps = 14/199 (7%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 + SFVLG+++ + L R + K + Y+ ++I G P LV + L + Sbjct: 28 ILSFVLGLMIGVLVALL-RLYGPTPLKKICDFYV--WMIRGTPLLVQLFLIF-------- 76 Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 + F + I S A+ +EIVR +++VP+GQ AA +LG++ +A Sbjct: 77 ---YGLPNAGITLDAFPAALIGFSLNVGAYSSEIVRGAILSVPKGQWNAAYSLGMSGAQA 133 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370 R V++PQ++ +PPL + +++L+K++SLA + ++ I++ T + + + + Sbjct: 134 IRWVIVPQSVFVSLPPLANTFISLVKDTSLAAVITVPEMFLAAQRIVSVTYEPLILYIEA 193 Query: 371 MFIYLSLSIMIALFMNRLN 389 IYL S +++ RL Sbjct: 194 ALIYLLFSTVLSKLQTRLE 212 >gi|160894911|ref|ZP_02075685.1| hypothetical protein CLOL250_02461 [Clostridium sp. L2-50] gi|156863342|gb|EDO56773.1| hypothetical protein CLOL250_02461 [Clostridium sp. L2-50] Length = 243 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 35/122 (28%), Positives = 75/122 (61%) Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 + A+I+EI+RSG+++V GQME A+GL+ R +++PQA+++I+P L +++++L+K Sbjct: 121 SGAYISEIMRSGILSVDPGQMEGGRAMGLSFATTMRKIVIPQAVKNILPTLGNEFISLIK 180 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 +S+ VG DL I + + + + L+ IY+ + ++I+L + + + + Sbjct: 181 ETSVVSFVGATDLYVAFNYIGSNSYEFMIPYLVMALIYIVMVLLISLGIKLMERSLRKSD 240 Query: 397 KK 398 ++ Sbjct: 241 RR 242 >gi|319441563|ref|ZP_07990719.1| glutamate ABC transport system, permease protein [Corynebacterium variabile DSM 44702] Length = 229 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 45/140 (32%), Positives = 72/140 (51%), Gaps = 9/140 (6%) Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321 V F +A YT+ F+AE +RSG+ +P GQ EAA +LGLT + R V+ PQA+R Sbjct: 94 VDQNFRLAVVAFVAYTSTFVAESLRSGINTIPFGQAEAARSLGLTFMQNFRYVIFPQALR 153 Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 I PL + + L KN+++A +G ++ + T+ I +W+F +++ MI Sbjct: 154 GSIVPLGNTLIALTKNTTIASVIGVSEASLLMKTMTENYASDI----LWIFGIIAVGFMI 209 Query: 382 -----ALFMNRLNAKIALKE 396 LF + A+K Sbjct: 210 LTLPTGLFFGWAGKRWAVKR 229 >gi|256848427|ref|ZP_05553869.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Lactobacillus coleohominis 101-4-CHN] gi|256714694|gb|EEU29673.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Lactobacillus coleohominis 101-4-CHN] Length = 231 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 30/86 (34%), Positives = 55/86 (63%) Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 T A+ +E +R+ + ++PR Q EAA ++G+T+++ ++ PQA R IPPL++ ++ L+K Sbjct: 107 TGAYASETIRAAISSIPRSQWEAAYSIGMTYQQVLFKIIFPQAFRIAIPPLSNSFIGLVK 166 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQ 362 ++SLA + AD+ V I + Q Sbjct: 167 DTSLASTITIADMFLVSQQIASHNYQ 192 >gi|255994314|ref|ZP_05427449.1| glutamine ABC transporter, permease protein [Eubacterium saphenum ATCC 49989] gi|255993027|gb|EEU03116.1| glutamine ABC transporter, permease protein [Eubacterium saphenum ATCC 49989] Length = 224 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 36/122 (29%), Positives = 70/122 (57%) Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 +AA++AE++R GL +V GQMEAA +LG++ A RL+++PQA + I+P L ++++ L+K Sbjct: 102 SAAYVAEVIRGGLQSVDHGQMEAASSLGMSKFMALRLIIIPQAFKIIMPSLGNEFITLIK 161 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 +S+ G +++ G + E Y+ L+I ++ + + ++ E Sbjct: 162 ETSVLAFCGVPEILRQGELWASSNFNTFEAYTGVALAYMCLTIPLSRIVKLIEKRMKRNE 221 Query: 397 KK 398 +K Sbjct: 222 RK 223 >gi|209552184|ref|YP_002284100.1| polar amino acid ABC transporter inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209539777|gb|ACI59708.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 217 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 55/194 (28%), Positives = 96/194 (49%), Gaps = 16/194 (8%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 V F LG +L+L +R +A +IS ++ G+P + + + + + P Sbjct: 23 VTCFALGAILAL-PVSFARLSENGFARAFASTFIS--VVRGVPPITWL---FLIFYGLPQ 76 Query: 251 LG-QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309 LG +F+ + + V L+ A+IAE RSG +A+P GQ+EAA ALGLT Sbjct: 77 LGLKFSSLSAAVVG---------LTMMCTAYIAEFYRSGWLAMPAGQIEAAKALGLTEFA 127 Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369 A R V+ PQ ++P + ++ LLKNS++ +G +D+ + + + Sbjct: 128 AFRKVIAPQVFVIVLPMAITYFIALLKNSAVVSVIGVSDVTDRALSESRSAPDPFNVFIA 187 Query: 370 WMFIYLSLSIMIAL 383 F+Y+++S+ I L Sbjct: 188 AGFVYMAVSVPIGL 201 >gi|58337932|ref|YP_194517.1| amino acid ABC transporter permease protein [Lactobacillus acidophilus NCFM] gi|227902900|ref|ZP_04020705.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus acidophilus ATCC 4796] gi|58255249|gb|AAV43486.1| amino acid ABC transporter permease protein [Lactobacillus acidophilus NCFM] gi|227869316|gb|EEJ76737.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus acidophilus ATCC 4796] Length = 215 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 39/128 (30%), Positives = 69/128 (53%), Gaps = 1/128 (0%) Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321 V P + + A AA+ AEI R G ++ GQ EAA L LT + +++PQ ++ Sbjct: 82 VFPRYQAALFAFVLNYAAYFAEIFRGGFQSIDEGQFEAAKVLRLTRFQTMTKIIIPQVIK 141 Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 ++P + ++ +NL+K+SSL +G DL+ G + + + ++L+ + IYL L + Sbjct: 142 IVLPSIGNEVINLIKDSSLVYVIGLGDLLRAGNVAMARDVTLVPLVLVGI-IYLLLISIC 200 Query: 382 ALFMNRLN 389 A M +L Sbjct: 201 AFVMKKLE 208 >gi|83748011|ref|ZP_00945041.1| Transporter [Ralstonia solanacearum UW551] gi|207738691|ref|YP_002257084.1| amino-acid transmembrane protein [Ralstonia solanacearum IPO1609] gi|83725313|gb|EAP72461.1| Transporter [Ralstonia solanacearum UW551] gi|206592059|emb|CAQ58965.1| amino-acid transmembrane protein [Ralstonia solanacearum IPO1609] Length = 230 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 55/170 (32%), Positives = 88/170 (51%), Gaps = 15/170 (8%) Query: 205 TRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP 264 RLSR+ + + + + ++S I G P L+ + L Y + P+LG ++SP Sbjct: 50 ARLSRY---RLLRGMVMAWVSA--IRGTPALIHLLLAY--YVVPPLLGL-------SISP 95 Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 + AL+C T+A++ EI+R L +VP Q AA ALG+ + R VLLPQ I Sbjct: 96 LTAGIG-ALACNTSAYLVEILRGALSSVPDAQRAAAQALGMREPQVWRHVLLPQVFYRAI 154 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374 PPLTS++ LLK SSL + +L +V Q+ +++ + +Y Sbjct: 155 PPLTSEFTILLKASSLMSIIAVPELATVARNASLQSDLPLQVFAMTAAVY 204 >gi|284009201|emb|CBA76271.1| amino acid ABC transporter, permease protein [Arsenophonus nasoniae] Length = 244 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 31/86 (36%), Positives = 58/86 (67%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 PE ++ AL+ +A++A V++G++A+ +GQ +A ++LG T ++LPQA+R + Sbjct: 94 PELTTVICALALIASAYLAHGVKAGILAIGQGQWQAGMSLGFTRWAVLWHIILPQALRMM 153 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADL 349 +P +Q++ L+K++SLA VG A+L Sbjct: 154 LPSFINQWIALIKDTSLAYIVGVAEL 179 >gi|227504863|ref|ZP_03934912.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Corynebacterium striatum ATCC 6940] gi|227198554|gb|EEI78602.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Corynebacterium striatum ATCC 6940] Length = 228 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 43/122 (35%), Positives = 75/122 (61%), Gaps = 1/122 (0%) Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335 YT+AF+AE +RSG+ V GQ EAA +LGL+ + ++ PQA+R+ I PL + + L Sbjct: 107 YTSAFVAESLRSGINTVDFGQAEAARSLGLSFTQTFSTIVFPQAVRAAIVPLGNTLIALT 166 Query: 336 KNSSLAVAVGFADL-VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394 KN+++A +G A+ + + TI Q I LI+ ++ L++ + L + +L+ K+A+ Sbjct: 167 KNTTIASVIGVAEASLLMKSTIEFHASQLFVIFLIFAAGFIILTLPMGLGLGKLSEKLAV 226 Query: 395 KE 396 K+ Sbjct: 227 KK 228 >gi|315222682|ref|ZP_07864571.1| ABC transporter, permease protein [Streptococcus anginosus F0211] gi|315188368|gb|EFU22094.1| ABC transporter, permease protein [Streptococcus anginosus F0211] Length = 268 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 32/91 (35%), Positives = 56/91 (61%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IA + AA+ AEI R G++++P GQ EAA L T + R ++LPQ ++ ++P + ++ Sbjct: 144 IAFTLNYAAYFAEIFRGGILSIPAGQYEAAKVLKFTPFQTIRFIILPQVVKVVLPSVFNE 203 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361 + L+K++SL A+G +DL+ T N+ Sbjct: 204 VMTLVKDTSLVYALGVSDLILASRTAANRDA 234 >gi|73537533|ref|YP_297900.1| glutamine ABC transporter permease protein [Ralstonia eutropha JMP134] gi|72120870|gb|AAZ63056.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Ralstonia eutropha JMP134] Length = 218 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 35/90 (38%), Positives = 56/90 (62%) Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 + A+IAEIVR ++VPRG EA +ALGL + V+ P A+R + PPL +Q++ LK Sbjct: 100 SGAYIAEIVRGAFLSVPRGLREAGLALGLPPWRVLAFVVGPVALRRMTPPLGNQFIVSLK 159 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 ++SL + +G +L G ++ +A+EI Sbjct: 160 DTSLFIVIGVGELTRQGQEVMAANFRAVEI 189 >gi|330816514|ref|YP_004360219.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia gladioli BSR3] gi|327368907|gb|AEA60263.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia gladioli BSR3] Length = 259 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 59/173 (34%), Positives = 94/173 (54%), Gaps = 27/173 (15%) Query: 191 VFSFVLGI----VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246 VFS +LGI VL+L A +R +Y+ F GLP ++I Sbjct: 34 VFSTLLGILAGMVLALMAVSPTRWLTTPA-----RIYVDVFR--GLPAALVIL------- 79 Query: 247 DKPVLGQ-FNFIGGSTVSPEFMSLYI-ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304 V+GQ +G + P L I AL+ ++A+IAEI RSG+ +V RGQ+ A ALG Sbjct: 80 ---VVGQGLAPVGLALFGPNPYPLAIVALALISSAYIAEIFRSGIQSVGRGQLYACQALG 136 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF----ADLVSVG 353 +++ + R V++PQ +R I+P L +Q+++++K+SSL +G DL ++G Sbjct: 137 MSYWSSMRHVIVPQGIRRILPALANQFISIVKDSSLVYFLGLLTSQRDLFTIG 189 >gi|325576597|ref|ZP_08147315.1| L-cystine ABC superfamily ATP binding cassette transporter, membrane protein [Haemophilus parainfluenzae ATCC 33392] gi|325161160|gb|EGC73275.1| L-cystine ABC superfamily ATP binding cassette transporter, membrane protein [Haemophilus parainfluenzae ATCC 33392] Length = 238 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 41/131 (31%), Positives = 75/131 (57%), Gaps = 6/131 (4%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + IA S A+ AE VR+ ++A+P+GQ EA+ A+G+ + +A ++PQA+ +P Sbjct: 108 FPTAIIAFSINIGAYAAETVRASILAIPKGQWEASYAIGMNYTQAFVRTIMPQALHISVP 167 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW---MFIYLSLSIMIA 382 L++ +++ +K++SLA V A+L V N T + E ILI+ IY +++ Sbjct: 168 SLSNTFISTVKDTSLASLVWIAELFRVAQ---NITAENYEFILIYSEAALIYWVFCFVLS 224 Query: 383 LFMNRLNAKIA 393 + RL +++ Sbjct: 225 IGQTRLEKRLS 235 >gi|302868069|ref|YP_003836706.1| polar amino acid ABC transporter inner membrane subunit [Micromonospora aurantiaca ATCC 27029] gi|315505534|ref|YP_004084421.1| polar amino acid abc transporter, inner membrane subunit [Micromonospora sp. L5] gi|302570928|gb|ADL47130.1| polar amino acid ABC transporter, inner membrane subunit [Micromonospora aurantiaca ATCC 27029] gi|315412153|gb|ADU10270.1| polar amino acid ABC transporter, inner membrane subunit [Micromonospora sp. L5] Length = 256 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 42/126 (33%), Positives = 74/126 (58%), Gaps = 5/126 (3%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +ALS AA++ EI R+G+++V Q+E A ALG + +A RLV++PQ +R ++P +Q Sbjct: 106 LALSLIAAAYLGEIFRAGILSVEAAQLEGARALGFSWGEAMRLVIIPQGVRRVLPAWVNQ 165 Query: 331 YLNLLKNSSLAVAVGF----ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386 + L+K+SSL +G +L +G TG ++L +F YL L++ + +N Sbjct: 166 LIALIKDSSLVYFLGLLASQRELFRIGQDYAANTGNQSALLLAGLF-YLVLTVPLTHAVN 224 Query: 387 RLNAKI 392 L+ ++ Sbjct: 225 WLDRRL 230 Score = 40.0 bits (92), Expect = 0.70, Method: Compositional matrix adjust. Identities = 19/58 (32%), Positives = 30/58 (51%) Query: 91 VGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 VG NT LA S + +++G L+ +S + + W RVY +VFR +P I + Sbjct: 27 VGLPNTLTLAVSAALLGSVLGMLLAVAGISRTRWLRWPARVYTDVFRGLPAAATILLI 84 >gi|83952546|ref|ZP_00961277.1| ABC polar amino acid transporter, inner membrane subunit [Roseovarius nubinhibens ISM] gi|83836219|gb|EAP75517.1| ABC polar amino acid transporter, inner membrane subunit [Roseovarius nubinhibens ISM] Length = 232 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 37/98 (37%), Positives = 60/98 (61%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 FM L++ L+ AAF EI+ +G+ +V +GQ EAA + GL + V+LPQAMR IP Sbjct: 102 FMVLFVVLTLILAAFAEEILWAGITSVDKGQWEAARSTGLGFTQTLGYVILPQAMRLAIP 161 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363 PLT++ + + K ++L +G D+++ T + +G A Sbjct: 162 PLTNRAIAITKMTALGTVIGVPDILNQATTAQSFSGNA 199 Score = 36.2 bits (82), Expect = 9.4, Method: Compositional matrix adjust. Identities = 22/65 (33%), Positives = 37/65 (56%) Query: 85 YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144 YA +IL G T WL+ ++ +GTL+ R ++++ V+ +VFR +PPLVV Sbjct: 25 YAPSILAGVGVTVWLSVLIILVGMTLGTLLACLRAYRVGPLSFLIVVFADVFRALPPLVV 84 Query: 145 IFFLY 149 I ++ Sbjct: 85 ILLVF 89 >gi|319948859|ref|ZP_08022972.1| ABC amino acid transporter, permease component [Dietzia cinnamea P4] gi|319437461|gb|EFV92468.1| ABC amino acid transporter, permease component [Dietzia cinnamea P4] Length = 243 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 46/131 (35%), Positives = 68/131 (51%), Gaps = 1/131 (0%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G + P F + +AL A+ AE+VR L AVP Q EAA+AL T + ++ PQ Sbjct: 82 GYELDPLFCGI-LALGLNYGAYAAEVVRGSLAAVPAPQWEAALALNFTSWQRLYRIVFPQ 140 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378 A +IPPL + + LLK S+LA + DL G + TG + I + +Y ++ Sbjct: 141 AWVQMIPPLNNLLIQLLKGSALASFILLQDLTFHIGELRRVTGDTVFAFGIGLVLYFLIA 200 Query: 379 IMIALFMNRLN 389 ++ LFMN L Sbjct: 201 YVLTLFMNMLE 211 >gi|326775557|ref|ZP_08234822.1| polar amino acid ABC transporter, inner membrane subunit [Streptomyces cf. griseus XylebKG-1] gi|326655890|gb|EGE40736.1| polar amino acid ABC transporter, inner membrane subunit [Streptomyces cf. griseus XylebKG-1] Length = 295 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 62/214 (28%), Positives = 102/214 (47%), Gaps = 42/214 (19%) Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI---FGLPTLVLI 238 T+ A V S +LG VL++ RLS H L ++ST L+ +P LV+I Sbjct: 81 TLKAFAYAAVLSLLLGAVLAV--GRLSEHRV--------LRWLSTLLVEFFRAMPVLVMI 130 Query: 239 -----ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293 ALK Q +L L+ Y + +AE+ R+G+ +V Sbjct: 131 FFIFVALKVQ---------------------PLPALVAGLTLYNGSVLAEVFRTGINSVD 169 Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353 RGQ EAA ALG+ + T VL PQA+R+++P + SQ + LK++SL + + + + G Sbjct: 170 RGQREAAYALGMRKTQVTTFVLAPQAVRAMLPTIISQLVVALKDTSLGYLITYEEFLHAG 229 Query: 354 GTIINQTGQAIEIILIWMF---IYLSLSIMIALF 384 I + + I + M IY+ + ++++ F Sbjct: 230 KLIASNLDYDLPFIPVVMVISPIYIGMCMLLSWF 263 Score = 43.5 bits (101), Expect = 0.065, Method: Compositional matrix adjust. Identities = 20/51 (39%), Positives = 36/51 (70%), Gaps = 1/51 (1%) Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIP 159 ++G ++ GRLS ++++ W+ + VE FR +P LV+IFF++ + L V P+P Sbjct: 94 LLGAVLAVGRLSEHRVLRWLSTLLVEFFRAMPVLVMIFFIFVA-LKVQPLP 143 >gi|119383897|ref|YP_914953.1| polar amino acid ABC transporter, inner membrane subunit [Paracoccus denitrificans PD1222] gi|119373664|gb|ABL69257.1| amino acid ABC transporter membrane protein 2, PAAT family [Paracoccus denitrificans PD1222] Length = 240 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 37/126 (29%), Positives = 73/126 (57%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 PE + IAL+ Y + + +E++R ++AVP+GQ+EAA A+G+++ R V+ PQ +R + Sbjct: 86 PEPVVGGIALAFYASTYFSEVIRGAVLAVPKGQLEAARAVGMSYFMGMREVVAPQTLRLL 145 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 +PP T+ ++++K +S+ + A++ G + T E+ L +Y ++ A Sbjct: 146 LPPSTNTAISMIKETSVLSTITVAEITYQGLVVQGATFAPFEVFLTTAALYWLITSAFAH 205 Query: 384 FMNRLN 389 M+R+ Sbjct: 206 GMHRVE 211 >gi|322376869|ref|ZP_08051362.1| amino acid ABC transporter, permease protein [Streptococcus sp. M334] gi|321282676|gb|EFX59683.1| amino acid ABC transporter, permease protein [Streptococcus sp. M334] Length = 213 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 55/197 (27%), Positives = 93/197 (47%), Gaps = 21/197 (10%) Query: 215 TGKALPLLYISTFLIFGLPTLVLIALKYQLHFD---------------KPVLGQFNFIGG 259 +G ++ L + LIF +P VLIA Q+H+ P+L Q FI Sbjct: 13 SGASMTLQVFALVLIFSIPLGVLIAFALQVHWKPLHYLINIYIWIMRGTPLLLQLIFIYY 72 Query: 260 STVS-----PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLV 314 S + IA AA+ AEI R G+ +P+GQ EAA L + R + Sbjct: 73 VLPSIGIRLDRLPAAIIAFVLNYAAYFAEIFRGGIDTIPKGQYEAAKVLKFSPFATVRYI 132 Query: 315 LLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374 +LPQ + ++P + ++ ++L+K++SL A+G +DL+ T N+ + + L IY Sbjct: 133 ILPQVTKVVLPSVFNEVMSLVKDTSLVYALGISDLILASRTAANRDASLVPMFLAGA-IY 191 Query: 375 LSLSIMIALFMNRLNAK 391 L L ++ + ++ K Sbjct: 192 LILIGIVTILAKKVEKK 208 >gi|209546611|ref|YP_002278529.1| polar amino acid ABC transporter inner membrane protein [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209537855|gb|ACI57789.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 229 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 40/119 (33%), Positives = 66/119 (55%) Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 AA+ AE++R L+AVP+G++EA A GL+ K R + LP+A+R +P + + + LK Sbjct: 111 AAYEAEVLRGALLAVPKGELEAGRAFGLSPLKLVRRIWLPRAIRIALPTIAGEIVMQLKA 170 Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 + LA V DL +V + T E +L+ YL L+ +IA L A++ ++ Sbjct: 171 TPLAFTVTVMDLYAVANKVRQDTLLVYEPLLVVTVFYLVLTAVIARVFRGLEAQVPVRR 229 >gi|307705125|ref|ZP_07642002.1| binding-protein-dependent transport system inner membrane component family protein [Streptococcus mitis SK597] gi|307621321|gb|EFO00381.1| binding-protein-dependent transport system inner membrane component family protein [Streptococcus mitis SK597] Length = 213 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 55/197 (27%), Positives = 93/197 (47%), Gaps = 21/197 (10%) Query: 215 TGKALPLLYISTFLIFGLPTLVLIALKYQLHFD---------------KPVLGQFNFIGG 259 +G ++ L + LIF +P VLIA Q+H+ P+L Q FI Sbjct: 13 SGASMTLQVFALVLIFSIPLGVLIAFALQVHWKLLHHLINIYIWIMRGTPLLLQLIFIYY 72 Query: 260 STVS-----PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLV 314 S + IA AA+ AEI R G+ +P+GQ EAA L + R + Sbjct: 73 VLPSIGIRLDRLPAAIIAFVLNYAAYFAEIFRGGIDTIPKGQYEAAKVLKFSPFDTVRYI 132 Query: 315 LLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374 +LPQ + ++P + ++ ++L+K++SL A+G +DL+ T N+ + + L IY Sbjct: 133 ILPQVTKIVLPSVFNEVMSLVKDTSLVYALGISDLILASRTAANRDASLVPMFLAGA-IY 191 Query: 375 LSLSIMIALFMNRLNAK 391 L L ++ + ++ K Sbjct: 192 LILIGIVTILAKKVEKK 208 >gi|292487229|ref|YP_003530101.1| putative ABC transporter inner membrane protein [Erwinia amylovora CFBP1430] gi|292900396|ref|YP_003539765.1| ABC transporter permease [Erwinia amylovora ATCC 49946] gi|291200244|emb|CBJ47372.1| ABC transporter, permease protein [Erwinia amylovora ATCC 49946] gi|291552648|emb|CBA19693.1| putative ABC transport system, inner membrane component [Erwinia amylovora CFBP1430] gi|312171330|emb|CBX79589.1| putative ABC transport system, inner membrane component [Erwinia amylovora ATCC BAA-2158] Length = 227 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 60/214 (28%), Positives = 105/214 (49%), Gaps = 18/214 (8%) Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239 T T+ F LGIV++L +R + + + L Y+ +LI G P LV + Sbjct: 21 TFTIPLTLIAFTLGLSLGIVVAL-----ARLYGPRPLQNLVRFYV--WLIRGTPLLVQLF 73 Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299 L + + G F + I + A+ +EI+R+ L++VP+GQ EA Sbjct: 74 LIF-----------YALPGVGITIDAFPAAVIGFTLNIGAYTSEIIRATLLSVPKGQWEA 122 Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359 A ++G++ + R +++PQA R +PPL++ ++ L+K++SLA + +L I Sbjct: 123 AHSIGMSWGQTLRRIIMPQAARVAVPPLSNTFIALVKDTSLASVITVPELFLAAQRIAAV 182 Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393 T Q + + IYL LS +++ RL K+A Sbjct: 183 TYQPLILYTEAAIIYLLLSSVLSALQARLEKKLA 216 >gi|298294200|ref|YP_003696139.1| polar amino acid ABC transporter inner membrane subunit [Starkeya novella DSM 506] gi|296930711|gb|ADH91520.1| polar amino acid ABC transporter, inner membrane subunit [Starkeya novella DSM 506] Length = 226 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 47/156 (30%), Positives = 82/156 (52%), Gaps = 7/156 (4%) Query: 247 DKPVLGQ--FNFIG----GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300 + P LGQ F F G G + P F + +AL+ A+ EI+R+G+ A P GQ EAA Sbjct: 65 NTPFLGQIFFIFFGLPALGLRMDP-FTAALVALTINLTAYACEIIRAGIEATPAGQFEAA 123 Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 +LGL +A L+++P A + + P +TSQ + +L S+L + A+L I ++T Sbjct: 124 SSLGLKPAQAFFLIIIPPAFQRVWPAMTSQLVIMLLASALCSQISVAELSYEANMIASRT 183 Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 + E ++ +YL+L+++ + + + E Sbjct: 184 FRNFEAYIVVTIMYLALAVLFRELLTWVGRRFVFGE 219 Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust. Identities = 19/41 (46%), Positives = 23/41 (56%) Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 I+GTL L K + W R YVE FRN P L IFF++ Sbjct: 36 ILGTLCAWASLKGPKPLRWFIRAYVEFFRNTPFLGQIFFIF 76 >gi|225352760|ref|ZP_03743783.1| hypothetical protein BIFPSEUDO_04390 [Bifidobacterium pseudocatenulatum DSM 20438] gi|225156367|gb|EEG69936.1| hypothetical protein BIFPSEUDO_04390 [Bifidobacterium pseudocatenulatum DSM 20438] Length = 517 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 33/80 (41%), Positives = 54/80 (67%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + LS + A++AEIVR + +V GQME A +LGL H +A V++PQA +P + +Q Sbjct: 394 LTLSLNSGAYLAEIVRGAVQSVDSGQMEGARSLGLNHHQAMARVIMPQATAIAMPSIINQ 453 Query: 331 YLNLLKNSSLAVAVGFADLV 350 + ++K+SSL +A+GF +L+ Sbjct: 454 LVIMIKDSSLLLAIGFGELL 473 Score = 42.0 bits (97), Expect = 0.17, Method: Compositional matrix adjust. Identities = 22/62 (35%), Positives = 33/62 (53%) Query: 88 AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147 A+L G NT + + A +G G ++S NK++ + +VY+ VFR P LV FF Sbjct: 314 ALLTGLKNTLLITLLSFVIALALGVAFGLMKVSENKILRGVSKVYIAVFRGTPILVWAFF 373 Query: 148 LY 149 Y Sbjct: 374 FY 375 >gi|196230490|ref|ZP_03129352.1| polar amino acid ABC transporter, inner membrane subunit [Chthoniobacter flavus Ellin428] gi|196225420|gb|EDY19928.1| polar amino acid ABC transporter, inner membrane subunit [Chthoniobacter flavus Ellin428] Length = 247 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 51/162 (31%), Positives = 82/162 (50%), Gaps = 13/162 (8%) Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290 G P LV + + Y F + + I G+ + LS + A+I+EI R+G+ Sbjct: 93 GTPLLVQLFI-YWYAFGEKLSSDLRLIAGA----------LTLSFFEGAYISEIFRAGIE 141 Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 V Q+E A +LG + + R V+ P A+R +PPL Q+ +++K+SSL +G A+ Sbjct: 142 GVGASQLETARSLGFSRVQTYRYVIFPLALRQSLPPLAGQFASIIKDSSLLSVLGIAEF- 200 Query: 351 SVGGTIINQ-TGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 S+ T N T EI L YL L++ I+L+ RL + Sbjct: 201 SLAATQTNSITYTTFEIYLPVALGYLILTLPISLWTQRLEQR 242 >gi|238753991|ref|ZP_04615350.1| ABC-type amino acid transport system permease component [Yersinia ruckeri ATCC 29473] gi|238707743|gb|EEQ00102.1| ABC-type amino acid transport system permease component [Yersinia ruckeri ATCC 29473] Length = 259 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 43/136 (31%), Positives = 81/136 (59%), Gaps = 1/136 (0%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 PE ++ AL+ AA++A V++G++AV GQ +A ++LG + V+LPQA+R + Sbjct: 94 PEITTVVFALALIAAAYLAHAVKAGIMAVGEGQWQAGLSLGFNRWQVLAYVVLPQALRIM 153 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG-QAIEIILIWMFIYLSLSIMIA 382 +P +Q+++L+K++SLA VG +L + + N++ +E+ L IY L +M+ Sbjct: 154 VPSFINQWISLIKDTSLAYIVGVNELTFLATQVNNRSMVYPMEVFLFVGLIYFVLCLMLD 213 Query: 383 LFMNRLNAKIALKEKK 398 +F N +N + K+ + Sbjct: 214 VFANAINRRFNPKKNR 229 >gi|167837542|ref|ZP_02464425.1| polar amino acid uptake ABC transporter, PAAT family, permease protein [Burkholderia thailandensis MSMB43] Length = 219 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 40/140 (28%), Positives = 75/140 (53%), Gaps = 1/140 (0%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G ++ P ++ L+ A+++E +R ++ + RGQ A+ +LGLTH + R V+ PQ Sbjct: 81 GISLDPTAAGIF-TLTLNAGAYLSESMRGAILGIGRGQWAASHSLGLTHVQTLRHVICPQ 139 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378 A+R +P L + ++L+K++SL + +L+ +I T Q + + L IY +LS Sbjct: 140 ALRLAVPSLGNTLISLIKDTSLVSVITVTELLRSTQEVIASTFQPLPLYLAAAAIYWALS 199 Query: 379 IMIALFMNRLNAKIALKEKK 398 ++A R+ + AL Sbjct: 200 TLLARLQGRIETRCALPSAH 219 >gi|57237747|ref|YP_178995.1| amino acid ABC transporter, permease protein PEB1 [Campylobacter jejuni RM1221] gi|86150632|ref|ZP_01068854.1| amino acid ABC transporter, permease protein PEB1 [Campylobacter jejuni subsp. jejuni CF93-6] gi|86151103|ref|ZP_01069319.1| amino acid ABC transporter, permease protein PEB1 [Campylobacter jejuni subsp. jejuni 260.94] gi|86152473|ref|ZP_01070678.1| amino acid ABC transporter, permease protein [Campylobacter jejuni subsp. jejuni HB93-13] gi|88596150|ref|ZP_01099387.1| amino acid ABC transporter, permease protein PEB1 [Campylobacter jejuni subsp. jejuni 84-25] gi|121613743|ref|YP_001000593.1| amino acid ABC transporter, permease protein PEB1 [Campylobacter jejuni subsp. jejuni 81-176] gi|157415176|ref|YP_001482432.1| amino acid ABC transporter permease [Campylobacter jejuni subsp. jejuni 81116] gi|167005524|ref|ZP_02271282.1| putative polar amino acid transport system permease protein [Campylobacter jejuni subsp. jejuni 81-176] gi|205356402|ref|ZP_03223167.1| putative ABC type amino-acid transporter permease protein [Campylobacter jejuni subsp. jejuni CG8421] gi|218562538|ref|YP_002344317.1| putative ABC-type amino-acid transporter permease [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|315124412|ref|YP_004066416.1| putative ABC-type amino-acid transporter permease protein [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|57166551|gb|AAW35330.1| amino acid ABC transporter, permease protein PEB1 [Campylobacter jejuni RM1221] gi|85838893|gb|EAQ56160.1| amino acid ABC transporter, permease protein PEB1 [Campylobacter jejuni subsp. jejuni CF93-6] gi|85842273|gb|EAQ59519.1| amino acid ABC transporter, permease protein PEB1 [Campylobacter jejuni subsp. jejuni 260.94] gi|85843358|gb|EAQ60568.1| amino acid ABC transporter, permease protein [Campylobacter jejuni subsp. jejuni HB93-13] gi|87248909|gb|EAQ71872.1| amino acid ABC transporter, permease protein PEB1 [Campylobacter jejuni subsp. jejuni 81-176] gi|88190991|gb|EAQ94963.1| amino acid ABC transporter, permease protein PEB1 [Campylobacter jejuni subsp. jejuni 84-25] gi|112360244|emb|CAL35039.1| putative ABC-type amino-acid transporter permease protein [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|157386140|gb|ABV52455.1| putative polar amino acid transport system permease protein [Campylobacter jejuni subsp. jejuni 81116] gi|205345787|gb|EDZ32425.1| putative ABC type amino-acid transporter permease protein [Campylobacter jejuni subsp. jejuni CG8421] gi|284926152|gb|ADC28504.1| amino acid ABC transporter permease [Campylobacter jejuni subsp. jejuni IA3902] gi|315018134|gb|ADT66227.1| putative ABC-type amino-acid transporter permease protein [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|315058358|gb|ADT72687.1| Putative ABC-type amino-acid transporter permease protein [Campylobacter jejuni subsp. jejuni S3] gi|315927531|gb|EFV06864.1| amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Campylobacter jejuni subsp. jejuni DFVF1099] gi|315932600|gb|EFV11531.1| amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Campylobacter jejuni subsp. jejuni 327] Length = 219 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 62/224 (27%), Positives = 104/224 (46%), Gaps = 23/224 (10%) Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231 N + + F + KI + + ++ IV F +++++ ++ K L YI F Sbjct: 6 NAQNIEFLMQGLFLTLKIALATCIISIVFGTFLA-ITKNYGDRLSKFLAACYIDIFRNTP 64 Query: 232 LPTLVLIALKYQLHFDKPVL-GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290 L +L A F PV GQF P+ I S YT++ +AEI+R GL Sbjct: 65 LLLWMLAAC-----FVLPVFFGQF---------PQAFWGTIGFSLYTSSVMAEIIRGGLN 110 Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 ++P+GQ EAA + G ++LPQ R IIP L SQ + +K+++ +G A+L Sbjct: 111 SIPKGQFEAAYSQGFGKFFTLFYIILPQTFRKIIPALLSQIVTTVKDTAYLAGLGIAELT 170 Query: 351 SVGGTIINQTGQAIEIIL-------IWMFIYLSLSIMIALFMNR 387 TI+ + EI+ I+ I SLS+++ + + Sbjct: 171 YNSKTILAKLTSFEEILAMIGVVAGIYFIICFSLSMLVRYYAKK 214 >gi|194472335|ref|ZP_03078319.1| arginine ABC transporter, permease protein ArtQ [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|205358365|ref|ZP_02655854.2| arginine ABC transporter, permease protein ArtQ [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|194458699|gb|EDX47538.1| arginine ABC transporter, permease protein ArtQ [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|205334652|gb|EDZ21416.1| arginine ABC transporter, permease protein ArtQ [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] Length = 239 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 53/183 (28%), Positives = 94/183 (51%), Gaps = 2/183 (1%) Query: 217 KALPLLYISTFLIFGLPTLVL-IALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSC 275 + LP + + F+ FG L+L ++ + LH + I VSP F+ IALS Sbjct: 56 RGLPEILVVLFIYFGSSQLLLTLSDGFTLHLGFAQIPVQMEIENFDVSP-FLCGVIALSL 114 Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335 AA+ ++ +R L AVP GQ E+ ALGL+ +++PQ R +P L +Q+L LL Sbjct: 115 LYAAYASQTLRGALKAVPSGQWESGQALGLSKTAIFFRLVMPQMWRHALPGLGNQWLVLL 174 Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395 K+++L + DL+ +I +T + +I IYL ++++ + R++ + Sbjct: 175 KDTALVSLISVNDLMLQTKSIATRTQEPFNWYIIAAAIYLVITLISQYILKRIDLRATRF 234 Query: 396 EKK 398 E++ Sbjct: 235 ERR 237 >gi|118590274|ref|ZP_01547677.1| amino acid ABC transporter, permease protein [Stappia aggregata IAM 12614] gi|118437246|gb|EAV43884.1| amino acid ABC transporter, permease protein [Stappia aggregata IAM 12614] Length = 215 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 55/187 (29%), Positives = 90/187 (48%), Gaps = 18/187 (9%) Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALK---YQLHFDKPVLGQFNFIGGSTV 262 RL+ + + + LP L + FGL V + LK + +F+ +FI G Sbjct: 34 RLAANIYTTLFRGLPELLTLFLVYFGLQIAVQVLLKMAGFDFYFEVN-----SFIAG--- 85 Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322 IALS +++ +E S +P+GQ E ALGL+ K RLV+LPQ +R Sbjct: 86 -------VIALSFVFSSYTSEAFLSAFRGIPQGQYEGGYALGLSKGKTLRLVVLPQLIRL 138 Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382 +P L + +L LLK++SL +G +D++ G T + I IYL L+++ + Sbjct: 139 ALPALGNSWLVLLKDTSLVSVIGLSDVMRQSGIAARVTKEPFMFFGIACLIYLVLAMISS 198 Query: 383 LFMNRLN 389 + R+ Sbjct: 199 TGLVRIE 205 >gi|330719365|ref|ZP_08313965.1| polar amino acid ABC transporter permease [Leuconostoc fallax KCTC 3537] Length = 213 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 32/90 (35%), Positives = 55/90 (61%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P F + IA AA++AEI R GL +VP+GQ +AA LG + ++LPQ ++ + Sbjct: 82 PRFEAAVIAFIINYAAYLAEIFRGGLQSVPKGQYDAAKVLGFNKIQTFFKIILPQVIKIV 141 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353 +P + ++ +NL+K++SL +G D++ G Sbjct: 142 VPSVGNEVINLVKDTSLVYVIGLGDILRAG 171 >gi|330807874|ref|YP_004352336.1| histidine ABC transporter, permease component [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327375982|gb|AEA67332.1| histidine ABC transporter, permease component [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 242 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 52/151 (34%), Positives = 74/151 (49%), Gaps = 2/151 (1%) Query: 226 TFLIFGLPTLVLIALK-YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284 T LI G+P LVL+ L Y L L F + P F + I L A+ E Sbjct: 67 TTLIRGVPDLVLMLLIFYSLQTWLTSLTDFMEWEYIEIDP-FGAGVITLGFIYGAYFTET 125 Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344 R ++AVPRGQ+EAA A GL + R V+ PQ MR +P + + ++ +LK ++L + Sbjct: 126 FRGAILAVPRGQVEAATAYGLKRGQRFRFVVFPQMMRFALPGIGNNWMVMLKATALVSII 185 Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYL 375 G ADLV T Q +++ IYL Sbjct: 186 GLADLVKAAQDAGKSTYQLFYFLVLAALIYL 216 >gi|271501779|ref|YP_003334805.1| polar amino acid ABC transporter inner membrane subunit [Dickeya dadantii Ech586] gi|270345334|gb|ACZ78099.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya dadantii Ech586] Length = 218 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 39/108 (36%), Positives = 61/108 (56%), Gaps = 1/108 (0%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G VSP + + +AL+ +T+AF+ +I + A+P+GQ EA LGLT + V+ PQ Sbjct: 80 GIDVSP-WTAASLALTLFTSAFLLDIWHGSVQALPKGQWEACRCLGLTFTQTLTRVIAPQ 138 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 AMR I P + ++K ++LA +GF DL G + N T Q ++ Sbjct: 139 AMRIAIAPTVGFSVQVIKGTALASIIGFVDLTKAGTMLNNVTYQPFKV 186 >gi|207722495|ref|YP_002252931.1| amino-acid transmembrane protein [Ralstonia solanacearum MolK2] gi|206587676|emb|CAQ18258.1| amino-acid transmembrane protein [Ralstonia solanacearum MolK2] Length = 230 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 55/170 (32%), Positives = 88/170 (51%), Gaps = 15/170 (8%) Query: 205 TRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP 264 RLSR+ + + + + ++S I G P L+ + L Y + P+LG ++SP Sbjct: 50 ARLSRY---RLLRGMVMAWVSA--IRGTPALIHLLLAY--YVVPPLLGL-------SISP 95 Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 + AL+C T+A++ EI+R L +VP Q AA ALG+ + R VLLPQ I Sbjct: 96 LTAGIG-ALACNTSAYLVEILRGALSSVPDAQRAAAQALGMREPQVWRHVLLPQVFYRAI 154 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374 PPLTS++ LLK SSL + +L +V Q+ +++ + +Y Sbjct: 155 PPLTSEFTILLKASSLMSIIAVPELATVARNASLQSDLPLQVFAMTAAVY 204 >gi|223939003|ref|ZP_03630888.1| polar amino acid ABC transporter, inner membrane subunit [bacterium Ellin514] gi|223892299|gb|EEF58775.1| polar amino acid ABC transporter, inner membrane subunit [bacterium Ellin514] Length = 264 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 38/121 (31%), Positives = 74/121 (61%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + LS ++ A+I+E++R+G+ +V + Q+E+A A+GLT + R V++PQA+R +PPL Q Sbjct: 139 LTLSFFSGAYISEVIRAGIESVGKSQIESARAIGLTRAQTYRYVIVPQAIRQSLPPLAGQ 198 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 +++L+K+SSL + ++ + + T +E + YL L++ I+++ L Sbjct: 199 FVSLIKDSSLLSIISISEFTLNAQEVNSYTFSTLESYIPLAVGYLVLTLPISIWTRHLEQ 258 Query: 391 K 391 K Sbjct: 259 K 259 >gi|148926600|ref|ZP_01810282.1| putative ABC-type amino-acid transporter permease protein [Campylobacter jejuni subsp. jejuni CG8486] gi|145845294|gb|EDK22388.1| putative ABC-type amino-acid transporter permease protein [Campylobacter jejuni subsp. jejuni CG8486] gi|307747817|gb|ADN91087.1| Amino acid ABC transporter, permease protein PEB1 [Campylobacter jejuni subsp. jejuni M1] Length = 221 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 62/224 (27%), Positives = 104/224 (46%), Gaps = 23/224 (10%) Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231 N + + F + KI + + ++ IV F +++++ ++ K L YI F Sbjct: 8 NAQNIEFLMQGLFLTLKIALATCIISIVFGTFLA-ITKNYGDRLSKFLAACYIDIFRNTP 66 Query: 232 LPTLVLIALKYQLHFDKPVL-GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290 L +L A F PV GQF P+ I S YT++ +AEI+R GL Sbjct: 67 LLLWMLAAC-----FVLPVFFGQF---------PQAFWGTIGFSLYTSSVMAEIIRGGLN 112 Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 ++P+GQ EAA + G ++LPQ R IIP L SQ + +K+++ +G A+L Sbjct: 113 SIPKGQFEAAYSQGFGKFFTLFYIILPQTFRKIIPALLSQIVTTVKDTAYLAGLGIAELT 172 Query: 351 SVGGTIINQTGQAIEIIL-------IWMFIYLSLSIMIALFMNR 387 TI+ + EI+ I+ I SLS+++ + + Sbjct: 173 YNSKTILAKLTSFEEILAMIGVVAGIYFIICFSLSMLVRYYAKK 216 >gi|310778237|ref|YP_003966570.1| amino acid ABC transporter membrane protein, PAAT family [Ilyobacter polytropus DSM 2926] gi|309747560|gb|ADO82222.1| amino acid ABC transporter membrane protein, PAAT family [Ilyobacter polytropus DSM 2926] Length = 212 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 36/114 (31%), Positives = 71/114 (62%), Gaps = 1/114 (0%) Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 +A+ EI+R + ++P+GQ EA+ LG+ + K R ++LPQA+R +P L+++ +NL+K+ Sbjct: 95 SAYTCEILRGCIQSIPKGQYEASRVLGMNYFKTMRHIILPQALRMSLPALSNEAVNLVKD 154 Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 ++L ++G A+++ I+ + + IL + IYL++S +I L + K Sbjct: 155 TALISSIGMAEILRNSKEIVARDFTIMPFILCGL-IYLAVSSIIILIFKKAEDK 207 >gi|187924662|ref|YP_001896304.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia phytofirmans PsJN] gi|187715856|gb|ACD17080.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia phytofirmans PsJN] Length = 225 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 55/199 (27%), Positives = 99/199 (49%), Gaps = 14/199 (7%) Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252 SF +G+ L+ F L R F K A+ Y+ +L G P LV + + + + P +G Sbjct: 30 SFAIGLALA-FLVALVRLFGPKWAVAIVRFYV--WLFRGSPLLVQL---FVIFYGLPNVG 83 Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312 V + I S A+ +E++R + ++P+GQ EAA ++G+T +A R Sbjct: 84 --------IVLDPLTAAIIGFSLNVGAYNSEVIRGVIESIPKGQWEAAYSMGMTREQALR 135 Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372 +LPQA R +PPL++ ++ L+K++SLA + ++ I + T + + + Sbjct: 136 RAILPQAARVALPPLSNSFIALVKDTSLAAVLTVPEVFQAAQRIASVTYEPLILYTEAAL 195 Query: 373 IYLSLSIMIALFMNRLNAK 391 +YL S +++ RL K Sbjct: 196 VYLVFSSVLSSAQVRLERK 214 >gi|16759799|ref|NP_455416.1| arginine transporter permease subunit ArtQ [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|16764250|ref|NP_459865.1| arginine transporter permease subunit ArtQ [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|29142428|ref|NP_805770.1| arginine transporter permease ArtQ [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|56414021|ref|YP_151096.1| arginine transporter permease subunit ArtQ [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|62179451|ref|YP_215868.1| arginine transporter permease subunit ArtQ [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|161614846|ref|YP_001588811.1| arginine transporter permease subunit ArtQ [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|167550403|ref|ZP_02344160.1| arginine ABC transporter, permease protein ArtQ [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|167992142|ref|ZP_02573240.1| arginine ABC transporter, permease protein ArtQ [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|168236834|ref|ZP_02661892.1| arginine ABC transporter, permease protein ArtQ [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|168240770|ref|ZP_02665702.1| arginine ABC transporter, permease protein ArtQ [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|168263591|ref|ZP_02685564.1| arginine ABC transporter, permease protein ArtQ [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|168466507|ref|ZP_02700369.1| arginine ABC transporter, permease protein ArtQ [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|168819947|ref|ZP_02831947.1| arginine ABC transporter, permease protein ArtQ [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|194445319|ref|YP_002040127.1| arginine transporter permease subunit ArtQ [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194451872|ref|YP_002044919.1| arginine transporter permease subunit ArtQ [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194735457|ref|YP_002113982.1| arginine transporter permease subunit ArtQ [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197251860|ref|YP_002145842.1| arginine transporter permease subunit ArtQ [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197263220|ref|ZP_03163294.1| arginine ABC transporter, permease protein ArtQ [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197362944|ref|YP_002142581.1| arginine transporter permease subunit ArtQ [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|198242126|ref|YP_002214853.1| arginine transporter permease subunit ArtQ [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|200390813|ref|ZP_03217424.1| arginine ABC transporter, permease protein ArtQ [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204929852|ref|ZP_03220873.1| arginine ABC transporter, permease protein ArtQ [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205352138|ref|YP_002225939.1| arginine transporter permease ArtQ [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|207856321|ref|YP_002242972.1| arginine transporter permease subunit ArtQ [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|213052699|ref|ZP_03345577.1| arginine transporter permease subunit ArtQ [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213428040|ref|ZP_03360790.1| arginine transporter permease subunit ArtQ [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213609525|ref|ZP_03369351.1| arginine transporter permease subunit ArtQ [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] gi|224582739|ref|YP_002636537.1| arginine transporter permease subunit ArtQ [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|238913406|ref|ZP_04657243.1| arginine transporter permease subunit ArtQ [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|25296626|pir||AF0607 arginine transport system permease protein ArtQ STY0922 [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16419397|gb|AAL19824.1| arginine 3rd transport system [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|16502092|emb|CAD05328.1| arginine transport system permease protein ArtQ [Salmonella enterica subsp. enterica serovar Typhi] gi|29138058|gb|AAO69619.1| arginine transport system permease protein ArtQ [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|56128278|gb|AAV77784.1| arginine transport system permease protein ArtQ [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|62127084|gb|AAX64787.1| ABC superfamily (membrane), arginine 3rd transport system [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|161364210|gb|ABX67978.1| hypothetical protein SPAB_02599 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194403982|gb|ACF64204.1| arginine ABC transporter, permease protein ArtQ [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194410176|gb|ACF70395.1| arginine ABC transporter, permease protein ArtQ [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194710959|gb|ACF90180.1| arginine ABC transporter, permease protein ArtQ [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|195630931|gb|EDX49517.1| arginine ABC transporter, permease protein ArtQ [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197094421|emb|CAR59937.1| arginine transport system permease protein ArtQ [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|197215563|gb|ACH52960.1| arginine ABC transporter, permease protein ArtQ [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197241475|gb|EDY24095.1| arginine ABC transporter, permease protein ArtQ [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197290078|gb|EDY29435.1| arginine ABC transporter, permease protein ArtQ [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|197936642|gb|ACH73975.1| arginine ABC transporter, permease protein ArtQ [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|199603258|gb|EDZ01804.1| arginine ABC transporter, permease protein ArtQ [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204320846|gb|EDZ06047.1| arginine ABC transporter, permease protein ArtQ [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205271919|emb|CAR36762.1| arginine transport system permease protein ArtQ [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205324501|gb|EDZ12340.1| arginine ABC transporter, permease protein ArtQ [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205329604|gb|EDZ16368.1| arginine ABC transporter, permease protein ArtQ [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205339979|gb|EDZ26743.1| arginine ABC transporter, permease protein ArtQ [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205343089|gb|EDZ29853.1| arginine ABC transporter, permease protein ArtQ [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205347747|gb|EDZ34378.1| arginine ABC transporter, permease protein ArtQ [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|206708124|emb|CAR32417.1| arginine transport system permease protein ArtQ [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|224467266|gb|ACN45096.1| arginine transport system permease protein ArtQ [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|261246144|emb|CBG23947.1| arginine transport system permease protein ArtQ [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267992651|gb|ACY87536.1| arginine transporter permease subunit ArtQ [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301157471|emb|CBW16961.1| arginine transport system permease protein ArtQ [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312911916|dbj|BAJ35890.1| arginine ABC transporter permease protein ArtQ [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|320085163|emb|CBY94950.1| Arginine transport system permease protein artQ [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|321223250|gb|EFX48319.1| Arginine ABC transporter, permease protein ArtQ [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|322616363|gb|EFY13272.1| arginine transporter permease subunit ArtQ [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322619613|gb|EFY16488.1| arginine transporter permease subunit ArtQ [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322622691|gb|EFY19536.1| arginine transporter permease subunit ArtQ [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322628603|gb|EFY25390.1| arginine transporter permease subunit ArtQ [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322631540|gb|EFY28296.1| arginine transporter permease subunit ArtQ [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322637067|gb|EFY33770.1| arginine transporter permease subunit ArtQ [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322641734|gb|EFY38370.1| arginine transporter permease subunit ArtQ [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322644473|gb|EFY41013.1| arginine transporter permease subunit ArtQ [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322650066|gb|EFY46483.1| arginine transporter permease subunit ArtQ [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322654141|gb|EFY50464.1| arginine transporter permease subunit ArtQ [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322658056|gb|EFY54323.1| arginine transporter permease subunit ArtQ [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322663530|gb|EFY59732.1| arginine transporter permease subunit ArtQ [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322670266|gb|EFY66406.1| arginine transporter permease subunit ArtQ [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322671502|gb|EFY67624.1| arginine transporter permease subunit ArtQ [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322676858|gb|EFY72925.1| arginine transporter permease subunit ArtQ [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322682783|gb|EFY78802.1| arginine transporter permease subunit ArtQ [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322686462|gb|EFY82444.1| arginine transporter permease subunit ArtQ [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|322713920|gb|EFZ05491.1| arginine transporter permease subunit ArtQ [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] gi|323129193|gb|ADX16623.1| arginine transporter permease subunit ArtQ [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|323196084|gb|EFZ81247.1| arginine transporter permease subunit ArtQ [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323196770|gb|EFZ81914.1| arginine transporter permease subunit ArtQ [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323202951|gb|EFZ87985.1| arginine transporter permease subunit ArtQ [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323208991|gb|EFZ93928.1| arginine transporter permease subunit ArtQ [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323211896|gb|EFZ96724.1| arginine transporter permease subunit ArtQ [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323215172|gb|EFZ99917.1| arginine transporter permease subunit ArtQ [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323222375|gb|EGA06753.1| arginine transporter permease subunit ArtQ [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323223891|gb|EGA08190.1| arginine transporter permease subunit ArtQ [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323229850|gb|EGA13973.1| arginine transporter permease subunit ArtQ [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323233075|gb|EGA17171.1| arginine transporter permease subunit ArtQ [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323240810|gb|EGA24852.1| arginine transporter permease subunit ArtQ [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323243127|gb|EGA27147.1| arginine transporter permease subunit ArtQ [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323248669|gb|EGA32597.1| arginine transporter permease subunit ArtQ [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323251670|gb|EGA35537.1| arginine transporter permease subunit ArtQ [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323261930|gb|EGA45496.1| arginine transporter permease subunit ArtQ [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323271987|gb|EGA55402.1| arginine transporter permease subunit ArtQ [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] gi|326622606|gb|EGE28951.1| arginine transporter permease subunit ArtQ [Salmonella enterica subsp. enterica serovar Dublin str. 3246] gi|326627181|gb|EGE33524.1| arginine transporter permease subunit ArtQ [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 238 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 53/183 (28%), Positives = 94/183 (51%), Gaps = 2/183 (1%) Query: 217 KALPLLYISTFLIFGLPTLVL-IALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSC 275 + LP + + F+ FG L+L ++ + LH + I VSP F+ IALS Sbjct: 55 RGLPEILVVLFIYFGSSQLLLTLSDGFTLHLGFTQIPVQMEIENFDVSP-FLCGVIALSL 113 Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335 AA+ ++ +R L AVP GQ E+ ALGL+ +++PQ R +P L +Q+L LL Sbjct: 114 LYAAYASQTLRGALKAVPSGQWESGQALGLSKTAIFFRLVMPQMWRHALPGLGNQWLVLL 173 Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395 K+++L + DL+ +I +T + +I IYL ++++ + R++ + Sbjct: 174 KDTALVSLISVNDLMLQTKSIATRTQEPFNWYIIAAAIYLVITLISQYILKRIDLRATRF 233 Query: 396 EKK 398 E++ Sbjct: 234 ERR 236 >gi|283956262|ref|ZP_06373742.1| putative polar amino acid transport system permease protein [Campylobacter jejuni subsp. jejuni 1336] gi|283791982|gb|EFC30771.1| putative polar amino acid transport system permease protein [Campylobacter jejuni subsp. jejuni 1336] Length = 219 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 62/225 (27%), Positives = 104/225 (46%), Gaps = 23/225 (10%) Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230 N + + F + KI + + ++ IV F +++++ ++ K L YI F Sbjct: 5 FNAQNIEFLMQGLFLTLKIALATCIISIVFGTFLA-ITKNYGDRLSKFLAACYIDIFRNT 63 Query: 231 GLPTLVLIALKYQLHFDKPVL-GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289 L +L A F PV GQF P+ I S YT++ +AEI+R GL Sbjct: 64 PLLLWMLAAC-----FVLPVFFGQF---------PQAFWGTIGFSLYTSSVMAEIIRGGL 109 Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349 ++P+GQ EAA + G ++LPQ R IIP L SQ + +K+++ +G A+L Sbjct: 110 NSIPKGQFEAAYSQGFGKFFTLFYIILPQTFRKIIPALLSQIVTTVKDTAYLAGLGIAEL 169 Query: 350 VSVGGTIINQTGQAIEIIL-------IWMFIYLSLSIMIALFMNR 387 TI+ + EI+ I+ I SLS+++ + + Sbjct: 170 TYNSKTILAKLRSFEEILAMIGVVAGIYFIICFSLSMLVRYYAKK 214 >gi|319950337|ref|ZP_08024256.1| polar amino acid ABC transporter, inner membrane subunit [Dietzia cinnamea P4] gi|319436029|gb|EFV91230.1| polar amino acid ABC transporter, inner membrane subunit [Dietzia cinnamea P4] Length = 276 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 39/153 (25%), Positives = 81/153 (52%), Gaps = 4/153 (2%) Query: 250 VLGQFNFIGGSTVSPE----FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305 V F + S + P ++ AL+ Y A IAE+VRSG+ +P+GQ EA +++GL Sbjct: 123 VFAYFGYFATSDLVPNQHAPLAAVVTALTLYNGAVIAELVRSGVHGLPKGQSEAGLSVGL 182 Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365 T + R + LPQA+ +++P L Q + +LK+S+L + + +L++ T+ + + Sbjct: 183 TSGQVLRSIQLPQALTAMLPALVGQLVVVLKDSALGYGITYLELLNWSKTLGSAYANTVP 242 Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 ++ +++ ++ + F L ++ + + Sbjct: 243 AYIVAGILFIVINYSLTKFAVYLEGRMKKRRAR 275 Score = 46.2 bits (108), Expect = 0.009, Method: Compositional matrix adjust. Identities = 27/73 (36%), Positives = 39/73 (53%), Gaps = 1/73 (1%) Query: 78 PYTSDSSYATAILV-GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136 P+ +D T+ L+ G TF A ++ A + G L G GRLS + W C V VE F Sbjct: 54 PFVTDPEVWTSYLIPGLKGTFTAAGISIVLAVVFGLLFGMGRLSPFAPLRWFCSVIVEFF 113 Query: 137 RNIPPLVVIFFLY 149 R +P L+++ F Y Sbjct: 114 RAVPVLLMMVFAY 126 >gi|300698249|ref|YP_003748910.1| amino-acid ABC transporter protein [Ralstonia solanacearum CFBP2957] gi|299074973|emb|CBJ54542.1| putative amino-acid ABC transporter protein [Ralstonia solanacearum CFBP2957] Length = 230 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 59/189 (31%), Positives = 96/189 (50%), Gaps = 15/189 (7%) Query: 186 NAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH 245 A + F+ L + + L RLSR+ + + + + ++S I G P L+ + L Y + Sbjct: 31 GASVCAFALGLVLSVVLLWARLSRY---RLLRGMVMAWVSA--IRGTPALIHLLLAY--Y 83 Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305 P+LG ++SP + AL+C T+A++ EI+R L +VP Q AA ALG+ Sbjct: 84 VVPPLLGL-------SISPLTAGIG-ALACNTSAYLVEILRGALSSVPDAQRAAAQALGM 135 Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365 + R VLLPQ IPPLTS++ LLK SSL + +L +V Q+ ++ Sbjct: 136 REPQVWRHVLLPQVFYRAIPPLTSEFTILLKASSLLSIIAVPELATVARNASLQSDLPLQ 195 Query: 366 IILIWMFIY 374 + + +Y Sbjct: 196 VFAMTAAVY 204 >gi|307709175|ref|ZP_07645634.1| binding-protein-dependent transport system inner membrane component family protein [Streptococcus mitis SK564] gi|307620121|gb|EFN99238.1| binding-protein-dependent transport system inner membrane component family protein [Streptococcus mitis SK564] Length = 213 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 56/197 (28%), Positives = 92/197 (46%), Gaps = 21/197 (10%) Query: 215 TGKALPLLYISTFLIFGLPTLVLIALKYQLHFD---------------KPVLGQFNFIGG 259 +G ++ L LIF +P VLIA Q+H+ P+L Q FI Sbjct: 13 SGASMTLQVFVLVLIFSIPLGVLIAFALQVHWKLLHHLINIYIWIMRGTPLLLQLIFIYY 72 Query: 260 STVS-----PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLV 314 S + IA AA+ AEI R G+ +P+GQ EAA L T R + Sbjct: 73 VLPSIGIRLDRLPAAIIAFVLNYAAYFAEIFRGGIDTIPKGQYEAAKVLKFTPFATVRYI 132 Query: 315 LLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374 +LPQ + ++P + ++ ++L+K++SL A+G +DL+ T N+ + + L IY Sbjct: 133 ILPQVTKIVLPSVFNEVMSLVKDTSLVYALGISDLILASRTAANRDASLVPMFLAGA-IY 191 Query: 375 LSLSIMIALFMNRLNAK 391 L L ++ + ++ K Sbjct: 192 LILIGIVTILAKKVEKK 208 >gi|312115906|ref|YP_004013502.1| polar amino acid ABC transporter inner membrane protein [Rhodomicrobium vannielii ATCC 17100] gi|311221035|gb|ADP72403.1| polar amino acid ABC transporter, inner membrane subunit [Rhodomicrobium vannielii ATCC 17100] Length = 358 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 38/126 (30%), Positives = 71/126 (56%), Gaps = 11/126 (8%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G++V+ +L+ A++ + +A++AE++R GL +VP Q+ A ALGL + + LV+LPQ Sbjct: 216 GASVNKPARALF-AIAVFASAYMAEVIRGGLQSVPENQVTAGRALGLRYSQILALVILPQ 274 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV----------GGTIINQTGQAIEIIL 368 A+RS +P + ++ LLK+++L + +G D + + + TG A ++ Sbjct: 275 AIRSALPGIAGTFIGLLKDTTLVLVIGLFDFLGMIQLAAADPAWSASTTTLTGYAFAALV 334 Query: 369 IWMFIY 374 W Y Sbjct: 335 FWSLCY 340 >gi|260769234|ref|ZP_05878167.1| arginine ABC transporter permease protein ArtQ [Vibrio furnissii CIP 102972] gi|260614572|gb|EEX39758.1| arginine ABC transporter permease protein ArtQ [Vibrio furnissii CIP 102972] Length = 229 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 56/172 (32%), Positives = 94/172 (54%), Gaps = 12/172 (6%) Query: 228 LIFGLPTLVLIALKY----QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283 +I GLP L+++ Y Q+ F + G+F +SP F+S IALS A++ A+ Sbjct: 56 VIRGLPELLVVLFIYFGSTQVLF--LITGEFI-----EISP-FISGVIALSLIFASYAAQ 107 Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343 +R L AV RGQ EAA ALG++ +A ++LPQA+R +P L +Q+L LLK+++L Sbjct: 108 TLRGALKAVGRGQREAASALGISPGRAFFRIVLPQAVRHALPGLMNQWLVLLKDTALVSL 167 Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395 +G DL+ T +A +YL ++++ + ++ K A++ Sbjct: 168 IGVTDLLKQAQLTSAATHEAFTWYATAAAVYLVITLITQRAVKVIDKKFAVQ 219 >gi|221369462|ref|YP_002520558.1| Polar amino acid ABC transporter, inner membrane subunit [Rhodobacter sphaeroides KD131] gi|221162514|gb|ACM03485.1| Polar amino acid ABC transporter, inner membrane subunit [Rhodobacter sphaeroides KD131] Length = 226 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 53/164 (32%), Positives = 82/164 (50%), Gaps = 14/164 (8%) Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291 LP LVLI + Y F P LG P + L + L AAF EI +GL + Sbjct: 74 LPPLVLILIMY---FGLPGLG--------LRMPGPLVLILVLGTVLAAFAEEIFWAGLTS 122 Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 VP+GQ EA A GL + + LPQA R +PPL ++ L + K ++L +G ++++S Sbjct: 123 VPKGQWEAGRATGLGFTQTLVRIALPQAARLALPPLVNRVLAISKMTALGSVIGVSEILS 182 Query: 352 VGGTIINQTGQAIEIIL---IWMFIYLSLSIMIALFMNRLNAKI 392 V T + TG A + + ++ ++L L ++ L R K+ Sbjct: 183 VASTAQSFTGSAAPLTMGAIAYVIVFLPLVVLTRLLERRFAWKV 226 >gi|212716937|ref|ZP_03325065.1| hypothetical protein BIFCAT_01881 [Bifidobacterium catenulatum DSM 16992] gi|212660222|gb|EEB20797.1| hypothetical protein BIFCAT_01881 [Bifidobacterium catenulatum DSM 16992] Length = 517 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 33/80 (41%), Positives = 54/80 (67%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + LS + A++AEIVR + +V GQME A +LGL H +A V++PQA +P + +Q Sbjct: 394 LTLSLNSGAYLAEIVRGAVQSVDSGQMEGARSLGLNHHQAMARVIMPQAAAIAMPSIINQ 453 Query: 331 YLNLLKNSSLAVAVGFADLV 350 + ++K+SSL +A+GF +L+ Sbjct: 454 LVIMIKDSSLLLAIGFGELL 473 Score = 43.1 bits (100), Expect = 0.083, Method: Compositional matrix adjust. Identities = 23/62 (37%), Positives = 33/62 (53%) Query: 88 AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147 A+L G NT + A ++G G ++S NK++ I +VY+ VFR P LV FF Sbjct: 314 ALLTGLKNTLLITLLSFAIALVLGVAFGLMKVSENKILEGIAKVYIAVFRGTPILVWAFF 373 Query: 148 LY 149 Y Sbjct: 374 FY 375 >gi|33865376|ref|NP_896935.1| ABC transporter for amino acids, membrane component [Synechococcus sp. WH 8102] gi|33632545|emb|CAE07357.1| ABC transporter for amino acids, membrane component [Synechococcus sp. WH 8102] Length = 324 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 41/116 (35%), Positives = 67/116 (57%), Gaps = 3/116 (2%) Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339 +IAE VR GL A+P Q EAA LGL+ + +LV+LPQA+R +P LT+Q + LL+N+S Sbjct: 202 YIAEDVRGGLQAIPPTQREAASVLGLSPLQTLQLVVLPQALRVALPSLTNQAVGLLQNTS 261 Query: 340 LAVAVGFADLVSVGGTIINQT---GQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 L +G +L+ + +++ G+ +E+ L +Y +AL L ++ Sbjct: 262 LMAILGLVELLGISRSLLANPAFIGRYLEVYLWLAAVYWLACTAMALLARHLEVQL 317 >gi|327478628|gb|AEA81938.1| amino acid ABC transporter, permease protein [Pseudomonas stutzeri DSM 4166] Length = 219 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 39/126 (30%), Positives = 73/126 (57%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I ++ + A + AE+ R+GL AVPR Q EA AL + A R V+LPQA+R ++P L + Sbjct: 94 IGIALHYACYTAEVYRAGLDAVPRSQWEAVTALNMKPWTAYRDVILPQALRPVLPALGNY 153 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 +++LK++ + A+ +++ I +++ + +E I + +L LS+ +A + RL Sbjct: 154 LISILKDTPVLSAITVVEIMQRAKNIGSESFRYLEPITMVGVFFLILSLGLAWCVRRLEH 213 Query: 391 KIALKE 396 ++ L Sbjct: 214 RMELAR 219 >gi|251793713|ref|YP_003008443.1| glutamine-binding periplasmic protein/glutamine transport system permease [Aggregatibacter aphrophilus NJ8700] gi|247535110|gb|ACS98356.1| glutamine-binding periplasmic protein/glutamine transport system permease protein [Aggregatibacter aphrophilus NJ8700] Length = 225 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 57/220 (25%), Positives = 111/220 (50%), Gaps = 27/220 (12%) Query: 183 MDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL------YISTFLIFGLPTLV 236 +D + V SF G+ ++L + EK + LL Y+ST I G P LV Sbjct: 21 IDKTIPLAVISFFAGVAIALIVALI--RIVEKPNLGIRLLQILCRIYVST--IRGTPMLV 76 Query: 237 LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296 I + + + P +G + P F + IA S A+ +E +R+ ++++P+GQ Sbjct: 77 QI---FIIFYGLPEVG-------IKLDP-FPTAIIAFSINIGAYASETIRAAILSIPKGQ 125 Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356 EA+ ++G+ + + ++PQA+R +PPL + +++ +K++SLA V ++ V I Sbjct: 126 WEASYSIGMNYYQTFTRTIMPQALRVSVPPLANTFISNVKDTSLASLVLVTEMFRVAQNI 185 Query: 357 INQTGQAIEIILIW---MFIYLSLSIMIALFMNRLNAKIA 393 T + E I+I+ IY + ++++ +RL +++ Sbjct: 186 ---TAENYEFIMIYSEAALIYWCICLILSFAQDRLEKRLS 222 >gi|227500392|ref|ZP_03930454.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Anaerococcus tetradius ATCC 35098] gi|227217455|gb|EEI82774.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Anaerococcus tetradius ATCC 35098] Length = 491 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 55/215 (25%), Positives = 107/215 (49%), Gaps = 42/215 (19%) Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249 + SF+LG++++L + E + GLP +L+AL DK Sbjct: 292 LIISFILGLIIALVRSAKIDMADE---------------LSGLPKFILLAL------DK- 329 Query: 250 VLGQF-NFIGGSTVSPEFMSLY---------------IALSCYTAAFIAEIVRSGLIAVP 293 +LG F I G+ + + + ++ I+ + ++A++AE+ R G+ +V Sbjct: 330 ILGLFVTIIRGTPTTIQLLIMFNVILANLDNLVLVAIISFALNSSAYMAELFRGGINSVN 389 Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353 +G+ EAA +LGL++ + + V++PQA+++ +P L ++ + L K +S++ +G ADL Sbjct: 390 KGEKEAARSLGLSNFQTMKKVVMPQAIKNSLPALGNEVITLFKETSISGFIGLADLTRGA 449 Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388 +I+QT A IYL +I + M ++ Sbjct: 450 SIVISQTFDAATAYFSAAIIYL----IIVMLMEKI 480 >gi|154495952|ref|ZP_02034648.1| hypothetical protein BACCAP_00233 [Bacteroides capillosus ATCC 29799] gi|150274835|gb|EDN01891.1| hypothetical protein BACCAP_00233 [Bacteroides capillosus ATCC 29799] Length = 255 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 44/142 (30%), Positives = 77/142 (54%), Gaps = 5/142 (3%) Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315 F G S F ++ +A A + +EI R G+ +VP GQ EA LG+T + V Sbjct: 112 FTWGGGESSRFAAVAVAFIINYACYFSEIYRGGIQSVPVGQQEAGQVLGMTRTQIFFKVT 171 Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI-- 373 L Q ++ I+PP++++ + L+K++SLA A+ +++ V + + + Q I +L +F Sbjct: 172 LLQMIKRIVPPMSNEIITLVKDTSLARAISLKEVIWVAESFM-KGNQGISGLLWPLFFVA 230 Query: 374 --YLSLSIMIALFMNRLNAKIA 393 YL S ++ L + RL K+A Sbjct: 231 VYYLVFSGVVTLLLGRLEKKLA 252 >gi|310814816|ref|YP_003962780.1| polar amino acid ABC transporter, inner membrane subunit [Ketogulonicigenium vulgare Y25] gi|308753551|gb|ADO41480.1| polar amino acid ABC transporter, inner membrane subunit [Ketogulonicigenium vulgare Y25] Length = 216 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 40/122 (32%), Positives = 66/122 (54%) Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335 Y +A++ EI R + ++ + Q EAA ++GLT +A R V+LPQAMR PP + L+ Sbjct: 95 YASAYLGEIWRGCVQSIAKTQFEAAESMGLTRWQALRDVILPQAMRIATPPTVGFTVQLI 154 Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395 KN+SLA VGF +L I N + + I +Y ++ ++L+ L K+ + Sbjct: 155 KNTSLASVVGFLELTRAAQVINNSLFEPFLVFGIAAALYFAVCYPLSLWSRNLERKLNVG 214 Query: 396 EK 397 + Sbjct: 215 RR 216 >gi|297202814|ref|ZP_06920211.1| glutamate transporter permease [Streptomyces sviceus ATCC 29083] gi|297148211|gb|EFH28893.1| glutamate transporter permease [Streptomyces sviceus ATCC 29083] Length = 222 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 32/65 (49%), Positives = 46/65 (70%) Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335 YTAAF+ E +RSG+ VP GQ EAA A+GL + RL++LPQA R++I PL + + L Sbjct: 102 YTAAFVCEAIRSGINTVPLGQAEAARAIGLNFSQTLRLIVLPQAFRAVINPLANVLIALT 161 Query: 336 KNSSL 340 KN+++ Sbjct: 162 KNTTV 166 >gi|297627338|ref|YP_003689101.1| Polar amino acid ABC transporter, inner membrane subunit [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] gi|296923103|emb|CBL57690.1| Polar amino acid ABC transporter, inner membrane subunit [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] Length = 218 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 48/167 (28%), Positives = 85/167 (50%), Gaps = 13/167 (7%) Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFM-SLYIALSCYTAAFIAEIVRSGL 289 G+P LV++ Y ++F P + SP M IAL+ T + E +R GL Sbjct: 64 GVPALVML---YVVYFGLPAIHW---------SPTAMVCAVIALAFTTGGYTGEYIRGGL 111 Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349 ++V G EA +AL + R V++PQ MR IP L + + + +SLA ++ ++L Sbjct: 112 VSVGEGTWEAGLALAMPTADVLRFVVVPQGMRVAIPSLMGLAIQIFQATSLAYSITVSEL 171 Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 + +I + + +A+EI + IY ++I NR+ +++L+E Sbjct: 172 TAQAYSISSSSFRALEIFGLAGIIYAIITIPATWVANRVERRLSLRE 218 >gi|239944756|ref|ZP_04696693.1| putative glutamate ABC transporter permease protein [Streptomyces roseosporus NRRL 15998] gi|239991221|ref|ZP_04711885.1| putative glutamate ABC transporter permease protein [Streptomyces roseosporus NRRL 11379] gi|291448218|ref|ZP_06587608.1| glutamate transporter permease [Streptomyces roseosporus NRRL 15998] gi|291351165|gb|EFE78069.1| glutamate transporter permease [Streptomyces roseosporus NRRL 15998] Length = 313 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 57/197 (28%), Positives = 101/197 (51%), Gaps = 27/197 (13%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 V S VLG++L++ RLS H P+ +++T I +L L+ Y + Sbjct: 79 VGSLVLGVLLAV--GRLSDHK--------PIRWVATTFIELFRSLPLLITIYAIWV---- 124 Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 G +L LS Y AE++R+G+ +VP+GQ EAA ALG++ + Sbjct: 125 --------GFLTDYSMWALAAGLSVYNGCVQAEVLRAGINSVPKGQSEAAYALGMSKTQV 176 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT---GQ--AIE 365 VL+PQA+RS++P + SQ + LK++SL + + +L+ I + T GQ + Sbjct: 177 MTTVLMPQAIRSMLPTIISQLVVTLKDTSLGFIILYPELLQTARLIASNTQVNGQYPYVS 236 Query: 366 IILIWMFIYLSLSIMIA 382 I++ IY+++ ++++ Sbjct: 237 TIVVIGTIYIAMCLLLS 253 Score = 39.7 bits (91), Expect = 0.78, Method: Compositional matrix adjust. Identities = 14/41 (34%), Positives = 29/41 (70%) Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 ++G L+ GRLS +K + W+ ++E+FR++P L+ I+ ++ Sbjct: 83 VLGVLLAVGRLSDHKPIRWVATTFIELFRSLPLLITIYAIW 123 >gi|77465461|ref|YP_354964.1| ABC polar amino acid transporter, inner membrane subunit [Rhodobacter sphaeroides 2.4.1] gi|126463863|ref|YP_001044976.1| polar amino acid ABC transporter, inner membrane subunit [Rhodobacter sphaeroides ATCC 17029] gi|77389879|gb|ABA81063.1| ABC polar amino acid transporter, inner membrane subunit [Rhodobacter sphaeroides 2.4.1] gi|126105674|gb|ABN78204.1| polar amino acid ABC transporter, inner membrane subunit [Rhodobacter sphaeroides ATCC 17029] Length = 226 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 53/164 (32%), Positives = 82/164 (50%), Gaps = 14/164 (8%) Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291 LP LVLI + Y F P LG P + L + L AAF EI +GL + Sbjct: 74 LPPLVLILIMY---FGLPGLG--------LRMPGPLVLILVLGTVLAAFAEEIFWAGLTS 122 Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 VP+GQ EA A GL + + LPQA R +PPL ++ L + K ++L +G ++++S Sbjct: 123 VPKGQWEAGRATGLGFTQTLVQIALPQAARLALPPLVNRVLAISKMTALGSVIGVSEILS 182 Query: 352 VGGTIINQTGQAIEIIL---IWMFIYLSLSIMIALFMNRLNAKI 392 V T + TG A + + ++ ++L L ++ L R K+ Sbjct: 183 VASTAQSFTGSAAPLTMGAIAYVIVFLPLVVLTRLLERRFAWKV 226 >gi|261823280|ref|YP_003261386.1| polar amino acid ABC transporter inner membrane protein [Pectobacterium wasabiae WPP163] gi|261607293|gb|ACX89779.1| polar amino acid ABC transporter, inner membrane subunit [Pectobacterium wasabiae WPP163] Length = 244 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 48/163 (29%), Positives = 94/163 (57%), Gaps = 14/163 (8%) Query: 226 TFLIF--GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV-----SPEFMSLYIALSCYTA 278 T+++F G P LV + L Y LGQF ++ S + P + +L ++LS T Sbjct: 55 TYVLFFRGTPLLVQLFLIYY------GLGQFPWVRESMLWPFLREPHWCAL-LSLSLCTG 107 Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338 A+ +EI+R GL +VP GQ+E+A A G+ + ++ P A+R +P ++ ++++K++ Sbjct: 108 AYASEIIRGGLQSVPVGQIESARACGMPSFMIFKRIVFPLAIRQALPAYGNELISMVKST 167 Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 SLA + ++ + +I +T +A+E+ L+ IYL +++++ Sbjct: 168 SLASIITLMEITGIAARLIAETYRALEVFLVAGAIYLFINLIL 210 >gi|167855090|ref|ZP_02477863.1| polar amino acid ABC transporter, inner membrane subunit [Haemophilus parasuis 29755] gi|167853828|gb|EDS25069.1| polar amino acid ABC transporter, inner membrane subunit [Haemophilus parasuis 29755] Length = 238 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 46/169 (27%), Positives = 85/169 (50%), Gaps = 13/169 (7%) Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282 YIS +I G P LV I + + + P +G F + P ++ I S A+ + Sbjct: 76 YIS--IIRGTPMLVQICIVF---YGLPAIGIF-------IDPIPAAI-IGFSINIGAYGS 122 Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342 E +R+ +++VP+GQ EA +G+T+ + R ++ PQA R +PPL++ ++ L K++SLA Sbjct: 123 ETIRAAILSVPKGQWEAGYTIGMTYMQTFRRIIAPQAFRVAVPPLSNTFIGLFKDTSLAS 182 Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 V ++ V + N + + + + IY ++ RL + Sbjct: 183 VVTVTEMFRVAQQVANMSYDFLPVYIEAGLIYWCFCWVLFFIQARLEKR 231 >gi|163857136|ref|YP_001631434.1| putative inner membrane component of binding-protein-dependent transport system [Bordetella petrii DSM 12804] gi|163260864|emb|CAP43166.1| putative inner membrane component of binding-protein-dependent transport system [Bordetella petrii] Length = 197 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 39/128 (30%), Positives = 73/128 (57%), Gaps = 7/128 (5%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + L+ A+ AE+VR ++AV GQ EAA+AL +T + R ++LPQA +++PP + Sbjct: 73 VVLAANAGAYGAEVVRGAILAVAPGQREAAVALNMTPGRIMRRIVLPQAFPAMLPPAGNL 132 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 + LLKN++L + DL G + +T + E+ ++ + +Y +++++I A Sbjct: 133 LIELLKNTALVSLITITDLTFRGQMLRAETLRTTEVFILLLLLYFAVALVI-------TA 185 Query: 391 KIALKEKK 398 I L E++ Sbjct: 186 GIRLLERR 193 >gi|158424240|ref|YP_001525532.1| amino acid ABC transporter permease protein [Azorhizobium caulinodans ORS 571] gi|158331129|dbj|BAF88614.1| amino acid ABC transporter permease protein [Azorhizobium caulinodans ORS 571] Length = 234 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 64/217 (29%), Positives = 111/217 (51%), Gaps = 20/217 (9%) Query: 167 FGMFLNNRG--LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224 FG+ N R LS LT+ + V S VLG+ L + + + G+ + L Y+ Sbjct: 9 FGVIANYRDELLSGLLLTIQLS----VSSIVLGLALGIMLASVRAMYGGLIGRIIKL-YV 63 Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284 ++ P LV + + + F PVLG + + + + I L YT EI Sbjct: 64 E--VVRNTPFLVQL---FIIFFGLPVLG----VRVDATAAALIGMTINLGAYTT----EI 110 Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344 +R+G+ AV R Q+EA +LG+T + R +++P A+ + P L SQ++ + SS+ A+ Sbjct: 111 IRAGIDAVHRSQVEAGQSLGMTTYQIYRHIIIPPAIAKVYPALCSQFILMTLASSVCSAI 170 Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 +L SV I +Q+ ++ E+ +I IYL+LS+++ Sbjct: 171 SAEELSSVTAQIESQSYRSFEVYVIATLIYLALSMVL 207 >gi|119383823|ref|YP_914879.1| polar amino acid ABC transporter, inner membrane subunit [Paracoccus denitrificans PD1222] gi|119373590|gb|ABL69183.1| L-aspartate ABC transporter membrane protein / L-glutamate ABC transporter membrane protein [Paracoccus denitrificans PD1222] Length = 230 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 68/233 (29%), Positives = 112/233 (48%), Gaps = 19/233 (8%) Query: 160 DHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKAL 219 D S+V+ FL +GL F L A FV VLG L+L +H L Sbjct: 5 DFSVVVDALPFLW-KGLQFSLLL---TAVAFVAGLVLGTGLALV-----QHLQVPVLAQL 55 Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVS-PEFMSLYIALSCYTA 278 Y++ LI +P LI + + F P++ + F G + ++ ++ S + A Sbjct: 56 AKGYVA--LIRSIP---LIMVLFWFFFLVPLIAGWMFNNGRPMPVGGVLTAFLTFSLFEA 110 Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338 A+ +EI+R GL +V +GQ EAA AL L+ + R ++LPQ R P + SQ + L +++ Sbjct: 111 AYYSEIIRVGLRSVGKGQYEAADALSLSTLQTYRHIILPQVFRVTSPIILSQTIILFQDT 170 Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIIL----IWMFIYLSLSIMIALFMNR 387 SL + DLV + G+ +E+ L +++ I S S ++A+ R Sbjct: 171 SLVYVLSLTDLVGAASKVAQLNGRLVEMYLTVAAVYLVICTSASQLVAVLRKR 223 >gi|271498822|ref|YP_003331847.1| polar amino acid ABC transporter inner membrane subunit [Dickeya dadantii Ech586] gi|270342377|gb|ACZ75142.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya dadantii Ech586] Length = 221 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 56/207 (27%), Positives = 104/207 (50%), Gaps = 32/207 (15%) Query: 190 FVFSFVLGIVLSLF----ATRLSR--HFHEKTGKALPLLYISTFLIF-GLPTLVLIALKY 242 F+ ++G++++L AT L + F+ + PLL + FLIF GLP+ Sbjct: 31 FILGLMIGVLVALLRLYGATPLKKICDFYVWMIRGTPLL-VQLFLIFYGLPS-------- 81 Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302 G T+ F + I S A+ +EIVR +++VP+GQ AA + Sbjct: 82 ---------------AGITLD-AFPAALIGFSLNVGAYSSEIVRGAILSVPKGQWNAAYS 125 Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362 LG++ +A R V++PQ++ +PPL + +++L+K++SLA + ++ I++ T + Sbjct: 126 LGMSGAQAIRWVIVPQSVFVSLPPLANTFISLVKDTSLAAVITVPEMFLAAQRIVSVTYE 185 Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLN 389 + + + IYL S +++ RL Sbjct: 186 PLILYIEAALIYLMFSTVLSKLQTRLE 212 >gi|227542732|ref|ZP_03972781.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Corynebacterium glucuronolyticum ATCC 51866] gi|227181498|gb|EEI62470.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Corynebacterium glucuronolyticum ATCC 51866] Length = 226 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 45/146 (30%), Positives = 78/146 (53%), Gaps = 10/146 (6%) Query: 259 GSTVSPE---------FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309 G T++PE F +A YT+ F+AE +RSG+ V GQ EAA +LGL+ + Sbjct: 80 GLTLAPENDNFIKNNNFWLAVLAFVLYTSTFVAESLRSGINTVHFGQAEAARSLGLSFTQ 139 Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL-VSVGGTIINQTGQAIEIIL 368 R V+ PQA +S + PL + + L KN+++A +G A+ + + TI N I + + Sbjct: 140 TFRFVVFPQAFKSAVVPLGNTLIALTKNTTIASVIGVAEASLLMKSTIENHANHTILVFM 199 Query: 369 IWMFIYLSLSIMIALFMNRLNAKIAL 394 I+ ++ +++ + L R + A+ Sbjct: 200 IFALGFIIITLPMGLLFTRYTRRKAV 225 Score = 36.2 bits (82), Expect = 9.4, Method: Compositional matrix adjust. Identities = 27/81 (33%), Positives = 43/81 (53%), Gaps = 9/81 (11%) Query: 92 GFVNTFW----LAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147 G + FW L F I A I+G ++ A R+S ++ I R Y+E RN P ++I F Sbjct: 11 GLLGAFWVTIKLTFFSAIGAFILGVILTAMRVSPVAILRGIARFYIETVRNTPLTLIILF 70 Query: 148 ----LYKSV-LSVLPIPDHSI 163 LY+++ L++ P D+ I Sbjct: 71 CSIGLYQNLGLTLAPENDNFI 91 >gi|219852260|ref|YP_002466692.1| polar amino acid ABC transporter, inner membrane subunit [Methanosphaerula palustris E1-9c] gi|219546519|gb|ACL16969.1| polar amino acid ABC transporter, inner membrane subunit [Methanosphaerula palustris E1-9c] Length = 226 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 48/165 (29%), Positives = 84/165 (50%), Gaps = 13/165 (7%) Query: 228 LIFGLPTLVLIALKYQLHFDKPVLG-QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286 L+ G P L+L+ + ++F P +G +F+ F++ + A+ +E +R Sbjct: 61 LVKGCPLLILL---FIIYFGLPSVGIRFS---------AFVASVLGFILCNGAYTSEYIR 108 Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346 L ++ GQM AA+ALG+T R+A R V+LPQAMR IP + ++ + L+K SSLA + Sbjct: 109 GALGSIRDGQMTAALALGMTRRQAIRYVMLPQAMRRAIPGIANEMIYLIKYSSLAYMLTC 168 Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 ++ G + + E + +YL+L + N L + Sbjct: 169 IEVTGAGKIVAAKYFTYTETFAVVGLVYLALVTIATWMANYLEVR 213 >gi|153010818|ref|YP_001372032.1| polar amino acid ABC transporter, inner membrane subunit [Ochrobactrum anthropi ATCC 49188] gi|151562706|gb|ABS16203.1| polar amino acid ABC transporter, inner membrane subunit [Ochrobactrum anthropi ATCC 49188] Length = 215 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 55/173 (31%), Positives = 87/173 (50%), Gaps = 13/173 (7%) Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282 Y+S F G P L+ + + L+F P +G + P F + I L A+ A Sbjct: 56 YVSVFR--GTPCLLQL---FVLYFGGPQIG-------INLEP-FAAGAIGLGLNIGAYYA 102 Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342 E +R ++ V GQ EAA ++G ++ ++ R V+LPQA R +I L + L+K S+L Sbjct: 103 EAMRGAILTVDTGQNEAARSIGFSNGQSMRFVVLPQAARLMIRSLGVNTVMLIKGSALVS 162 Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395 A+ +L I T + EI I IY+ L ++A F++ L A+ ALK Sbjct: 163 AISVVELTYTAQRFIGSTYRPFEIFGIAAAIYMVLIYIVARFVDFLEARYALK 215 >gi|209516320|ref|ZP_03265177.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. H160] gi|209503256|gb|EEA03255.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. H160] Length = 254 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 41/125 (32%), Positives = 70/125 (56%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 E + +A++ A+ EIVRSG+ ++ RGQ++AA ALGL R+ R V+LPQA+ ++ Sbjct: 89 EIQAAILAMTVNLGAYATEIVRSGIDSISRGQVQAAQALGLHGRQVFRYVVLPQALANVF 148 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 P L Q L ++ S++ + DL I ++ ++ E +I YL +SI++ Sbjct: 149 PALLGQVLIVMLGSAVVSQISVPDLTYAANFIQSRNFRSFESYVIITATYLLMSIVLRQL 208 Query: 385 MNRLN 389 +NR Sbjct: 209 LNRFG 213 >gi|153952480|ref|YP_001398011.1| amino acid ABC transporter, permease protein PEB1 [Campylobacter jejuni subsp. doylei 269.97] gi|152939926|gb|ABS44667.1| amino acid ABC transporter, permease protein PEB1 [Campylobacter jejuni subsp. doylei 269.97] Length = 219 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 62/224 (27%), Positives = 104/224 (46%), Gaps = 23/224 (10%) Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231 N + + F + KI + + ++ IV F +++++ ++ K L YI F Sbjct: 6 NAQNIQFLMQGLFLTLKIALATCIISIVFGTFLA-ITKNYGDRLSKFLAACYIDIFRNTP 64 Query: 232 LPTLVLIALKYQLHFDKPVL-GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290 L +L A F PV GQF P+ I S YT++ +AEI+R GL Sbjct: 65 LLLWMLAAC-----FVLPVFFGQF---------PQAFWGTIGFSLYTSSVMAEIIRGGLN 110 Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 ++P+GQ EAA + G ++LPQ R IIP L SQ + +K+++ +G A+L Sbjct: 111 SIPKGQFEAAYSQGFGKFFTLFYIILPQTFRKIIPALLSQIVTTVKDTAYLAGLGIAELT 170 Query: 351 SVGGTIINQTGQAIEIIL-------IWMFIYLSLSIMIALFMNR 387 TI+ + EI+ I+ I SLS+++ + + Sbjct: 171 YNSKTILAKLTSFEEILAMIGVVAGIYFIICFSLSMLVRYYAKK 214 >gi|295693351|ref|YP_003601961.1| amino acid ABC transporter, permease protein [Lactobacillus crispatus ST1] gi|295031457|emb|CBL50936.1| Amino acid ABC transporter, permease protein [Lactobacillus crispatus ST1] Length = 223 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 55/193 (28%), Positives = 95/193 (49%), Gaps = 27/193 (13%) Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY-----QLHFDKPVLGQFNFIGGSTVS 263 R F + + + LY+ F I +PT+VL+ L Y LH + P Sbjct: 47 RTFKNRPLRFVLRLYLEFFRI--VPTVVLLYLVYYILPRSLHVNWPA------------- 91 Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 +M++ +A S + AA ++IVR L +VP+ Q E+ +ALGL + R VLLPQA++ Sbjct: 92 -TWMAV-LAFSMWVAAEFSDIVRGALESVPKTQRESGLALGLNRLQLFRYVLLPQAVKLE 149 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF-----IYLSLS 378 +P + ++K +SL + + ++++VG II Q + W++ +Y L Sbjct: 150 LPATINLATRVIKTTSLLMIINIMEVINVGQQIIEANNQQYPAGVFWVYGFIFILYFILD 209 Query: 379 IMIALFMNRLNAK 391 ++ + RL AK Sbjct: 210 YPLSAWAKRLTAK 222 Score = 37.4 bits (85), Expect = 4.6, Method: Compositional matrix adjust. Identities = 17/68 (25%), Positives = 38/68 (55%) Query: 82 DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141 + S ++ G + W+A ++ +GT+ G R N+ + ++ R+Y+E FR +P Sbjct: 11 EGSNFARLMAGLWTSIWIAALSLVIGLAVGTIFGILRTFKNRPLRFVLRLYLEFFRIVPT 70 Query: 142 LVVIFFLY 149 +V+++ +Y Sbjct: 71 VVLLYLVY 78 >gi|146280412|ref|YP_001170565.1| amino acid ABC transporter, permease protein [Pseudomonas stutzeri A1501] gi|145568617|gb|ABP77723.1| amino acid ABC transporter, permease protein [Pseudomonas stutzeri A1501] Length = 219 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 39/126 (30%), Positives = 73/126 (57%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I ++ + A + AE+ R+GL AVPR Q EA AL + A R V+LPQA+R ++P L + Sbjct: 94 IGIALHYACYTAEVYRAGLDAVPRSQWEAVTALNMKPWTAYRDVILPQALRPVMPALGNY 153 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 +++LK++ + A+ +++ I +++ + +E I + +L LS+ +A + RL Sbjct: 154 LISILKDTPVLSAITVVEIMQRAKNIGSESFRYLEPITMVGVFFLILSLGLAWCVRRLEH 213 Query: 391 KIALKE 396 ++ L Sbjct: 214 RMELAR 219 >gi|89074704|ref|ZP_01161162.1| Putative amino acid ABC transporter, permease protein [Photobacterium sp. SKA34] gi|89049468|gb|EAR55029.1| Putative amino acid ABC transporter, permease protein [Photobacterium sp. SKA34] Length = 216 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 61/208 (29%), Positives = 105/208 (50%), Gaps = 19/208 (9%) Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV-LI 238 TL M T IF S ++G++L+L R + L LYIS F G P LV L Sbjct: 22 TLLMATIGAIF--SLIVGLILALI-----RIYQLPLLNILTQLYISFFR--GTPLLVQLF 72 Query: 239 ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQME 298 L Y L P L + F + I LS + AA++AE +R+ + V R Q E Sbjct: 73 LLYYGLPQIIPSLVGLD---------AFSAAVIGLSLHFAAYMAESIRAAITGVDRSQRE 123 Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN 358 A++ +G+T + R ++LPQA R +P L + +++++K++SLA +G ++++ + Sbjct: 124 ASLTIGMTEWQTMRRIILPQATRIALPSLMNYFIDMIKSTSLAFTLGVPEIMAKAQMEAS 183 Query: 359 QTGQAIEIILIWMFIYLSLSIMIALFMN 386 + + E L IY ++ +++ + N Sbjct: 184 SSFKFFEAFLAVAMIYWAVVVVLTRYNN 211 >gi|328886198|emb|CCA59437.1| glutamate permease [Streptomyces venezuelae ATCC 10712] Length = 285 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 63/214 (29%), Positives = 100/214 (46%), Gaps = 42/214 (19%) Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI---FGLPTLVLI 238 T+ A V S LG VL+ RLS H L +IST L+ +P LV+I Sbjct: 71 TLKAFAYAAVLSLALGAVLA--TGRLSEH--------RALRWISTLLVEFFRAMPVLVMI 120 Query: 239 -----ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293 ALK Q +L L+ Y + +AE+ R+G+ AV Sbjct: 121 FFIFVALKVQ---------------------ALPALVAGLTLYNGSVLAEVFRTGIHAVA 159 Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353 RGQ EAA ALG+ + VL PQA+R+++P + SQ + LK++SL + + + + G Sbjct: 160 RGQGEAAYALGMRKTQVMTYVLAPQAVRAMLPAIISQLVVALKDTSLGFLITYEEFLHAG 219 Query: 354 GTIINQTGQA---IEIILIWMFIYLSLSIMIALF 384 I + I ++L+ IY+ + ++++ F Sbjct: 220 KLIASNLDYDLPFIPVVLVISPIYIGMCMLLSWF 253 Score = 40.4 bits (93), Expect = 0.43, Method: Compositional matrix adjust. Identities = 17/40 (42%), Positives = 28/40 (70%) Query: 110 IGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 +G ++ GRLS ++ + WI + VE FR +P LV+IFF++ Sbjct: 85 LGAVLATGRLSEHRALRWISTLLVEFFRAMPVLVMIFFIF 124 >gi|190150935|ref|YP_001969460.1| amino-acid ABC transporter permease protein [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|307264289|ref|ZP_07545878.1| Amino acid ABC transporter, permease protein [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|189916066|gb|ACE62318.1| hypothetical amino-acid ABC transporter permease protein [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|306870353|gb|EFN02108.1| Amino acid ABC transporter, permease protein [Actinobacillus pleuropneumoniae serovar 13 str. N273] Length = 238 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 56/211 (26%), Positives = 109/211 (51%), Gaps = 25/211 (11%) Query: 193 SFVLGIVLS-----LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247 SF++G+ ++ + T ++ H + A+ +YIS +I G P LV I++ + + Sbjct: 42 SFIIGMAIAVGVALIRVTPVNGMLH-RIALAIVKVYIS--IIRGTPMLVQISVVF---YG 95 Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307 P +G + + P + I S A+ +E VR+ + +VP+GQ EA +G+T+ Sbjct: 96 LPAIGVY-------IDP-IPAAIIGFSLNIGAYGSETVRAAISSVPKGQWEAGYTIGMTY 147 Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI- 366 + R ++ PQA+R +IPPL++ ++ L K++SLA V ++ V + N + + + Sbjct: 148 MQTFRRIIAPQAIRVVIPPLSNTFIGLFKDTSLASVVTVTEMFRVAQQMANMSYDFLPVY 207 Query: 367 ----ILIWMFIYLSLSIMIALFMNRLNAKIA 393 ++ W F ++ L ++ A R N +A Sbjct: 208 IEAGLIYWCFCWV-LFLIQAKLERRFNCFVA 237 >gi|323267946|gb|EGA51425.1| arginine transporter permease subunit ArtQ [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] Length = 245 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 53/183 (28%), Positives = 94/183 (51%), Gaps = 2/183 (1%) Query: 217 KALPLLYISTFLIFGLPTLVL-IALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSC 275 + LP + + F+ FG L+L ++ + LH + I VSP F+ IALS Sbjct: 62 RGLPEILVVLFIYFGSSQLLLTLSDGFTLHLGFTQIPVQMEIENFDVSP-FLCGVIALSL 120 Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335 AA+ ++ +R L AVP GQ E+ ALGL+ +++PQ R +P L +Q+L LL Sbjct: 121 LYAAYASQTLRGALKAVPSGQWESGQALGLSKTAIFFRLVMPQMWRHALPGLGNQWLVLL 180 Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395 K+++L + DL+ +I +T + +I IYL ++++ + R++ + Sbjct: 181 KDTALVSLISVNDLMLQTKSIATRTQEPFNWYIIAAAIYLVITLISQYILKRIDLRATRF 240 Query: 396 EKK 398 E++ Sbjct: 241 ERR 243 >gi|313771501|gb|EFS37467.1| conserved hypothetical protein [Propionibacterium acnes HL074PA1] gi|313811372|gb|EFS49086.1| conserved hypothetical protein [Propionibacterium acnes HL083PA1] gi|313830874|gb|EFS68588.1| conserved hypothetical protein [Propionibacterium acnes HL007PA1] gi|313833301|gb|EFS71015.1| conserved hypothetical protein [Propionibacterium acnes HL056PA1] gi|314973761|gb|EFT17857.1| conserved hypothetical protein [Propionibacterium acnes HL053PA1] gi|314976410|gb|EFT20505.1| conserved hypothetical protein [Propionibacterium acnes HL045PA1] gi|314983309|gb|EFT27401.1| conserved hypothetical protein [Propionibacterium acnes HL005PA1] gi|315096537|gb|EFT68513.1| conserved hypothetical protein [Propionibacterium acnes HL038PA1] gi|327326786|gb|EGE68569.1| amino acid ABC transporter, permease protein [Propionibacterium acnes HL096PA2] gi|327443012|gb|EGE89666.1| hypothetical protein HMPREF9570_02518 [Propionibacterium acnes HL043PA1] gi|327445134|gb|EGE91788.1| hypothetical protein HMPREF9571_02120 [Propionibacterium acnes HL043PA2] gi|328760217|gb|EGF73790.1| amino acid ABC transporter, permease protein [Propionibacterium acnes HL099PA1] Length = 182 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 46/127 (36%), Positives = 67/127 (52%), Gaps = 1/127 (0%) Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312 QF + V + I L A++AEI RSGL +V GQ EAA ALG+ R Sbjct: 7 QFASVETEKVVTALAAAIIGLGLNEGAYLAEITRSGLESVDVGQTEAAKALGMKPSLIVR 66 Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA-DLVSVGGTIINQTGQAIEIILIWM 371 ++PQAMR IIPP ++ + +LK +SL +A+ F DL I N T I ++++ Sbjct: 67 RAIIPQAMRVIIPPPGNETIGMLKTTSLVLALPFTLDLQYATSAIANCTYAPIPLLVVAA 126 Query: 372 FIYLSLS 378 YL ++ Sbjct: 127 CWYLVMT 133 >gi|159186208|ref|NP_356121.2| ABC transporter, membrane spanning protein (amino acid) [Agrobacterium tumefaciens str. C58] gi|159141342|gb|AAK88906.2| ABC transporter, membrane spanning protein (amino acid) [Agrobacterium tumefaciens str. C58] Length = 222 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 39/115 (33%), Positives = 69/115 (60%), Gaps = 1/115 (0%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IAL+ A+ EI+R G+ ++P+GQ+EA +ALGL + R ++L A+R++ P LTSQ Sbjct: 95 IALALNGGAYAIEIIRGGVDSIPKGQVEAGLALGLHRAQIFRHIILKPALRAVYPSLTSQ 154 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL-SIMIALF 384 ++ L +S+ ++ +L SV I T ++ E+ +YL + S+M+ +F Sbjct: 155 FIMLTLTTSVCTSIAAYELTSVAQKIEADTFRSFEVYFSITLLYLVISSLMMGIF 209 Score = 38.1 bits (87), Expect = 2.2, Method: Compositional matrix adjust. Identities = 24/61 (39%), Positives = 35/61 (57%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L+ + T LA +GM AT++G L R S KL+ + +VE RN P LV IFF+ Sbjct: 17 LLLACLATIGLAIAGMSLATVLGVLGVVARRSRFKLLRGLVIGFVEAIRNTPFLVQIFFI 76 Query: 149 Y 149 + Sbjct: 77 F 77 >gi|330942300|gb|EGH44928.1| amino acid ABC transporter permease [Pseudomonas syringae pv. pisi str. 1704B] Length = 277 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 46/119 (38%), Positives = 74/119 (62%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IALS A+++EI R+G+I V GQ EAA+AL L + V LPQAMR+IIPP T+Q Sbjct: 148 IALSLNYGAYLSEIFRAGIIGVSVGQREAALALALRPAQIFWRVTLPQAMRTIIPPTTNQ 207 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 ++++LK+SSL +G +++ + + + + IE++ +Y +SI + L +RL Sbjct: 208 FISMLKDSSLISVMGVWEVMFLAQSYGRSSYRYIEMLTTAAVLYWIMSIGLELLQSRLE 266 >gi|91784367|ref|YP_559573.1| ABC polar amino acid transporter, inner membrane subunit [Burkholderia xenovorans LB400] gi|296158455|ref|ZP_06841286.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. Ch1-1] gi|91688321|gb|ABE31521.1| amino acid ABC transporter membrane protein, PAAT family [Burkholderia xenovorans LB400] gi|295891399|gb|EFG71186.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. Ch1-1] Length = 225 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 55/199 (27%), Positives = 99/199 (49%), Gaps = 14/199 (7%) Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252 SF +G+ L+ F L R F K A+ Y+ +L G P LV + + + + P +G Sbjct: 30 SFAIGLALA-FLVALVRLFGPKWAVAIVRFYV--WLFRGSPLLVQL---FVIFYGLPNVG 83 Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312 V + I S A+ +E++R + ++P+GQ EAA ++G+T +A R Sbjct: 84 --------IVLDPLTAAIIGFSLNVGAYNSEVIRGVIESIPKGQWEAAYSMGMTREQALR 135 Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372 +LPQA R +PPL++ ++ L+K++SLA + ++ I + T + + + Sbjct: 136 RAILPQAARVALPPLSNSFIALVKDTSLAAVLTVPEVFQAAQRIASVTYEPLILYTEAAL 195 Query: 373 IYLSLSIMIALFMNRLNAK 391 +YL S +++ RL K Sbjct: 196 VYLVFSSVLSSAQVRLERK 214 >gi|325063884|gb|ADY67574.1| amino acid ABC transporter, membrane spanning protein [Agrobacterium sp. H13-3] Length = 222 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 39/115 (33%), Positives = 69/115 (60%), Gaps = 1/115 (0%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IAL+ A+ EI+R G+ ++P+GQ+EA +ALGL + R ++L A+R++ P LTSQ Sbjct: 95 IALALNGGAYAIEIIRGGVDSIPKGQVEAGLALGLHRAQIFRHIILKPALRAVYPSLTSQ 154 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL-SIMIALF 384 ++ L +S+ ++ +L SV I T ++ E+ +YL + S+M+ +F Sbjct: 155 FIMLTLTTSVCTSIAAYELTSVAQQIEADTFRSFEVYFSITLLYLVISSLMMGVF 209 Score = 39.3 bits (90), Expect = 0.96, Method: Compositional matrix adjust. Identities = 25/61 (40%), Positives = 35/61 (57%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L+ + T LA +GM AT+IG L R S KL+ + +VE RN P LV IFF+ Sbjct: 17 LLLACLATIGLAIAGMSLATVIGVLGVVARRSRFKLLRGLVIGFVEAIRNTPFLVQIFFI 76 Query: 149 Y 149 + Sbjct: 77 F 77 >gi|307544139|ref|YP_003896618.1| ABC transporter permease [Halomonas elongata DSM 2581] gi|307216163|emb|CBV41433.1| ABC-type transport system permease protein [Halomonas elongata DSM 2581] Length = 234 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 57/206 (27%), Positives = 95/206 (46%), Gaps = 34/206 (16%) Query: 188 KIFVFSFVLGIVLSLF--ATRLSRHF--HEKTGKALPLLYISTFLIFGLPTLVLIALKY- 242 ++ V S +L +VL L + ++SR++ H L LY T LI G+P LVL+ L + Sbjct: 20 ELAVLSLILAVVLGLITASAKMSRNWLLHR-----LGTLY--TTLIRGVPDLVLMMLLFF 72 Query: 243 -------------QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289 FD + N EF++ + + A++ E R Sbjct: 73 GGQIGVNMFTDWLYARFDIDIFININ---------EFVAGVVTIGLIFGAYMGETFRGAF 123 Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349 +AV GQ+EA A G++H R + PQ MR +P L++ ++ LLK ++L +G +D+ Sbjct: 124 LAVDNGQIEAGRAYGMSHWLVFRRIRFPQMMRHALPGLSNNWMVLLKTTALVSVIGLSDM 183 Query: 350 VSVGGTIINQTGQAIEIILIWMFIYL 375 V V T + ++I +YL Sbjct: 184 VRVAAEASKATREPFTFMIIVAIVYL 209 >gi|322385753|ref|ZP_08059397.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus cristatus ATCC 51100] gi|321270491|gb|EFX53407.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus cristatus ATCC 51100] Length = 213 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 60/188 (31%), Positives = 97/188 (51%), Gaps = 22/188 (11%) Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235 LS T+ A + VFS LGI+L+ S K + L L+I +++ G P L Sbjct: 12 LSGAATTLQVFALVLVFSIPLGIMLAF-----SMQIRLKPLQWL--LHIYIWIMRGTPLL 64 Query: 236 V-LIALKYQLHFDKPVLG-QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293 + LI + Y L P LG + + I + IA + AA+ AEI R G+ ++P Sbjct: 65 LQLIFIYYVL----PSLGIRLDRIPAAI---------IAFTLNYAAYFAEIFRGGISSIP 111 Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353 GQ EAA L T + RL++LPQ ++ ++P + ++ + L+K++SL A+G +DL+ Sbjct: 112 TGQYEAAKVLKFTPVQTIRLIILPQVVKIVLPSVFNEVMTLVKDTSLVYALGISDLILAS 171 Query: 354 GTIINQTG 361 T N+ Sbjct: 172 RTAANRDA 179 >gi|302189024|ref|ZP_07265697.1| arginine/ornithine ABC transporter, permease protein [Pseudomonas syringae pv. syringae 642] Length = 232 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 52/167 (31%), Positives = 86/167 (51%), Gaps = 11/167 (6%) Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL----YIALSCYTA 278 ++ T++I G P LV + L Y L QF+ + S + P S +A + T+ Sbjct: 56 WLYTYVIRGTPMLVQLFLIYY------GLAQFDAVRESFLWPWLSSATFCACLAFTINTS 109 Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338 A+ AEI+ L A P G++EAA A+G++ K R +LLP A+R +P +++ + +L+ + Sbjct: 110 AYTAEIIAGSLKATPAGEIEAARAMGMSKAKMYRRILLPSALRRALPQYSNEVIMMLQTT 169 Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS-IMIALF 384 SLA V D+ T+ Q E + YL L+ I++ LF Sbjct: 170 SLASIVTLIDITGAARTVNAQFYLPFEAYITAGVFYLCLTFILVRLF 216 >gi|227487311|ref|ZP_03917627.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Corynebacterium glucuronolyticum ATCC 51867] gi|227092737|gb|EEI28049.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Corynebacterium glucuronolyticum ATCC 51867] Length = 226 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 45/146 (30%), Positives = 78/146 (53%), Gaps = 10/146 (6%) Query: 259 GSTVSPE---------FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309 G T++PE F +A YT+ F+AE +RSG+ V GQ EAA +LGL+ + Sbjct: 80 GLTLAPENDNFIKNNNFWLAVLAFVLYTSTFVAESLRSGINTVHFGQAEAARSLGLSFTQ 139 Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL-VSVGGTIINQTGQAIEIIL 368 R V+ PQA +S + PL + + L KN+++A +G A+ + + TI N I + + Sbjct: 140 TFRFVVFPQAFKSAVVPLGNTLIALTKNTTIASVIGVAEASLLMKSTIENHANHTILVFM 199 Query: 369 IWMFIYLSLSIMIALFMNRLNAKIAL 394 I+ ++ +++ + L R + A+ Sbjct: 200 IFALGFIIITLPMGLLFTRYTRRKAV 225 >gi|148925846|ref|ZP_01809533.1| amino-acid ABC transporter integral membrane protein [Campylobacter jejuni subsp. jejuni CG8486] gi|145844832|gb|EDK21936.1| amino-acid ABC transporter integral membrane protein [Campylobacter jejuni subsp. jejuni CG8486] Length = 233 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 54/209 (25%), Positives = 107/209 (51%), Gaps = 18/209 (8%) Query: 191 VFSFVLG---IVLSLFATRLSRHFHE---KTGKALPLLYISTFLIFGLPTLVLIALKYQL 244 +FS ++G I++S F ++ + + + + PLL FL + LP K+ + Sbjct: 29 IFSLIIGLFCILMSYFKIKILENICKLYIEFSRNTPLLIQLFFLYYALP-------KFNI 81 Query: 245 HFDK-PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 H ++ P L T+ P F + + LS +++AE +R+G A+ + Q EA ++L Sbjct: 82 HLEQIPPLDLICLSVEETLRPSFACVIVGLSFLGGSYMAESLRAGFEAIRKQQFEAGLSL 141 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363 G + R V+LPQA+ +P +++ + L+K +S+ + DLV++ ++ + T + Sbjct: 142 GFSKFGNLRYVILPQALAISMPSISANIIFLIKETSVVSIIALPDLVNLMKSLNSLTYKT 201 Query: 364 IEIILI----WMFIYLSLSIMIALFMNRL 388 E++ + ++ I L LS ++ F RL Sbjct: 202 DELLFLLFMGYLCIILPLSFILLKFEKRL 230 Score = 38.1 bits (87), Expect = 2.6, Method: Compositional matrix adjust. Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 4/75 (5%) Query: 82 DSSYATAILVGFVNTFWL----AFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137 D + A F+ WL +F G+I + IIG K++ IC++Y+E R Sbjct: 2 DFDFILAQAPAFLTAAWLTIKLSFFGIIFSLIIGLFCILMSYFKIKILENICKLYIEFSR 61 Query: 138 NIPPLVVIFFLYKSV 152 N P L+ +FFLY ++ Sbjct: 62 NTPLLIQLFFLYYAL 76 >gi|255525600|ref|ZP_05392534.1| polar amino acid ABC transporter, inner membrane subunit [Clostridium carboxidivorans P7] gi|296185487|ref|ZP_06853897.1| ABC transporter, permease protein [Clostridium carboxidivorans P7] gi|255510690|gb|EET86996.1| polar amino acid ABC transporter, inner membrane subunit [Clostridium carboxidivorans P7] gi|296050321|gb|EFG89745.1| ABC transporter, permease protein [Clostridium carboxidivorans P7] Length = 221 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 66/234 (28%), Positives = 107/234 (45%), Gaps = 29/234 (12%) Query: 167 FGMFLNNRGLSFPTL--TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTG------KA 218 F F+N + P+L T++ + VF+ +L IV+S+ + G +A Sbjct: 5 FQWFINLFPIVLPSLKLTIEISLVSLVFTLLLSIVISIVRYYKVWGISQLFGVYITFFRA 64 Query: 219 LPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTA 278 PL+ L FGLP V+ ALK F V +AL+ TA Sbjct: 65 TPLVAQLFILYFGLPC-VIPALKSMTAFQATV--------------------VALTLNTA 103 Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338 +F+AE +R+ L +V GQ+EA ++ +T + V+LPQA +P L +Q++ ++K S Sbjct: 104 SFMAETLRAALESVEVGQLEACYSMSMTKYQTMMRVVLPQAFVVALPSLGNQFIGIIKGS 163 Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 +L VG AD+++ T + E L IYL + I + L +I Sbjct: 164 ALGFTVGLADIMAKAKMEAALTLRFFEAYLCVTLIYLVIVIFVEKIQRLLEKRI 217 >gi|28870093|ref|NP_792712.1| glutamine ABC transporter permease [Pseudomonas syringae pv. tomato str. DC3000] gi|28853339|gb|AAO56407.1| glutamine ABC transporter, permease protein [Pseudomonas syringae pv. tomato str. DC3000] Length = 246 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 41/133 (30%), Positives = 73/133 (54%), Gaps = 10/133 (7%) Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286 +++ G+P L++I Y F P+L N G F ++ L Y +A++ EI+ Sbjct: 69 YVMRGIPLLMVIFWTY---FLVPLLIGHNITG-------FTTMLCTLVVYQSAYLCEIIS 118 Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346 + A+P GQ EA+ ALG+ + + T V+LPQA+ + +P L SQ+++++K +SL + Sbjct: 119 GAIQALPAGQYEASRALGMGYLRTTVWVILPQALYNALPSLISQFISIIKETSLGYVINV 178 Query: 347 ADLVSVGGTIINQ 359 ++ I NQ Sbjct: 179 QEVTFAANQINNQ 191 >gi|78066234|ref|YP_369003.1| ABC polar amino acid transporter, inner membrane subunit [Burkholderia sp. 383] gi|77966979|gb|ABB08359.1| amino acid ABC transporter membrane protein 2, PAAT family [Burkholderia sp. 383] Length = 241 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 45/128 (35%), Positives = 71/128 (55%), Gaps = 10/128 (7%) Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291 +P L+LI Y F P+L + G +TV AL+ A++A V +G++A Sbjct: 72 IPVLMLIFWTY---FLMPMLLHMDVPGLATV-------VCALALIGGAYLAHAVHAGIVA 121 Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 GQ +A ++LGLT + R VLLPQA+R + P +Q++ L+K++SLA VG +L Sbjct: 122 AGDGQWQAGLSLGLTRWQTVRYVLLPQAIRIMTPSFVNQWVALVKDTSLAYIVGVPELSF 181 Query: 352 VGGTIINQ 359 V + N+ Sbjct: 182 VATQVNNR 189 >gi|323529954|ref|YP_004232106.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia sp. CCGE1001] gi|323386956|gb|ADX59046.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. CCGE1001] Length = 218 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 38/140 (27%), Positives = 74/140 (52%), Gaps = 1/140 (0%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G VSP +++ + L+ YT+A++ +I R + AVPRGQ A +LG+T + R ++ PQ Sbjct: 80 GVDVSP-WVAATVTLTLYTSAYLVDIWRGCVEAVPRGQWAAGASLGMTFSQQLRYIVWPQ 138 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378 A++ + P + ++K+++LA +GF +L G I N + I + IY ++ Sbjct: 139 ALKIAVAPTVGFLVQVVKSTALASIIGFTELTKTGTMITNAAFRPFPIYGMVAMIYFAMC 198 Query: 379 IMIALFMNRLNAKIALKEKK 398 + + L + + + + Sbjct: 199 FPLTWYARVLEKRNKVGQHR 218 >gi|237808728|ref|YP_002893168.1| polar amino acid ABC transporter, inner membrane subunit [Tolumonas auensis DSM 9187] gi|237500989|gb|ACQ93582.1| polar amino acid ABC transporter, inner membrane subunit [Tolumonas auensis DSM 9187] Length = 218 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 38/127 (29%), Positives = 69/127 (54%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +AL +++AF+ +I + ++P+GQ EA+ LGL+ + R V+LPQA+R I P Sbjct: 91 LALVLFSSAFLCDIWSGCIESLPKGQWEASRCLGLSFFQTMRYVILPQALRVAIAPTVGF 150 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 + ++K ++L +GF +L G + N T Q ++ + IY + ++LF L Sbjct: 151 SVQVVKGTALTSIIGFVELTKAGTMLNNATFQPFKVFALVALIYFMICYPLSLFSQFLER 210 Query: 391 KIALKEK 397 K+ + K Sbjct: 211 KLNVSGK 217 >gi|219872122|ref|YP_002476497.1| amino acid ABC transporter permease [Haemophilus parasuis SH0165] gi|219692326|gb|ACL33549.1| ABC-type amino acid transport system, permease component [Haemophilus parasuis SH0165] Length = 212 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 51/206 (24%), Positives = 101/206 (49%), Gaps = 23/206 (11%) Query: 193 SFVLGIVLSL-----FATRLSRHFHEKTGKALPLLYISTFL--IFGLPTLVLIALKYQLH 245 SF++G+ +++ T ++ FH L L ++ ++ I G P LV I + + Sbjct: 16 SFIIGMAIAVGVALVRVTSVNSAFHR-----LLLWFVKGYISIIRGTPMLVQICIVF--- 67 Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305 + P +G F + P ++ I S A+ +E +R+ +++VP+GQ EA +G+ Sbjct: 68 YGLPAIGIF-------IDPIPAAI-IGFSINIGAYGSETIRAAILSVPKGQWEAGYTIGM 119 Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365 T+ + R ++ PQA R +PPL++ ++ L K++SLA V ++ V + N + + Sbjct: 120 TYMQTFRRIIAPQAFRVAVPPLSNTFIGLFKDTSLASVVTVTEMFRVAQQVANMSYDFLP 179 Query: 366 IILIWMFIYLSLSIMIALFMNRLNAK 391 + + IY ++ RL + Sbjct: 180 VYIEAGLIYWCFCWVLFFIQARLEKR 205 >gi|212716943|ref|ZP_03325071.1| hypothetical protein BIFCAT_01887 [Bifidobacterium catenulatum DSM 16992] gi|212660228|gb|EEB20803.1| hypothetical protein BIFCAT_01887 [Bifidobacterium catenulatum DSM 16992] Length = 225 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 67/215 (31%), Positives = 102/215 (47%), Gaps = 27/215 (12%) Query: 191 VFSFVLGIVLSLF------ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244 +FS +LG++L + + R+ + + K LPL I F++ G Sbjct: 29 LFSTILGVILVMMRISPVASLRIVSGAYVELFKNLPLTIIMVFMVLG------------- 75 Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYI-ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 Q T + F L + LS YTAAF+ E +RSG+ VP GQ EA AL Sbjct: 76 -----AYAQLKLSFSDTFATNFFWLAVTGLSLYTAAFVCESLRSGINTVPLGQAEACRAL 130 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS--VGGTIINQTG 361 GL ++ ++LPQA R + PL + + LLKNS++A A A S + I ++ Sbjct: 131 GLNFMQSATQIILPQAFRGSVAPLGNTLIALLKNSTVAAAASVATETSSLMSEMIEYRSD 190 Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 I I LI+ F Y+ L I I + L+ K+A++ Sbjct: 191 VIIPIFLIFAFGYVILIIPIGMLTTYLSNKLAVRR 225 >gi|242238358|ref|YP_002986539.1| polar amino acid ABC transporter inner membrane subunit [Dickeya dadantii Ech703] gi|242130415|gb|ACS84717.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya dadantii Ech703] Length = 218 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 38/108 (35%), Positives = 62/108 (57%), Gaps = 1/108 (0%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G VSP + + +AL+ +T+AF+ +I ++A+P+GQ EA LGLT + V+ PQ Sbjct: 80 GIDVSP-WTAAALALTLFTSAFLVDIWHGSVLALPKGQWEACRCLGLTFTQTLTRVVAPQ 138 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 AMR I P + ++K ++LA +GF +L G + N T Q ++ Sbjct: 139 AMRIAIAPTVGFSVQVIKGTALASIIGFVELTKAGTMLNNVTFQPFKV 186 >gi|228477605|ref|ZP_04062238.1| ABC transporter, permease protein [Streptococcus salivarius SK126] gi|228250749|gb|EEK09947.1| ABC transporter, permease protein [Streptococcus salivarius SK126] Length = 213 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 33/91 (36%), Positives = 57/91 (62%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +A + AA+ AEI R G++A+P+GQ EAA L L+ + R ++LPQ ++ ++P + ++ Sbjct: 89 LAFTLNYAAYFAEIFRGGILAIPKGQYEAAKMLKLSPFQTIRYIILPQVVKIVLPSIFNE 148 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361 +NL+K+SSL +G DL+ T N+ Sbjct: 149 IINLVKDSSLVYVLGVGDLLLESRTAANRDA 179 >gi|171318717|ref|ZP_02907859.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria MEX-5] gi|171096084|gb|EDT41011.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria MEX-5] Length = 603 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 67/223 (30%), Positives = 111/223 (49%), Gaps = 28/223 (12%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLL----YISTFLIFGLPTLVLIALKYQLHF 246 V F L I L+L RLSR PLL + T+L +PT+VL+ L L + Sbjct: 92 VLGFALAIPLAL--ARLSRS---------PLLSSCSWAYTWLFRSIPTIVLLLLLNNLGY 140 Query: 247 --DKPVLG----QFNFIGGST---VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQM 297 D LG F+ G T ++P FM+ + L+ AAF AE +R G+++V GQ Sbjct: 141 LYDTVRLGIPFTDIVFLRGPTTDLITP-FMAAILGLTLTQAAFAAEAIRGGILSVDHGQR 199 Query: 298 EAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII 357 EAA ALGL + T ++LPQAMR+ +P + + L K +++ + DL + Sbjct: 200 EAAAALGLPRARQTWRIVLPQAMRATLPAAFNDVIGLAKGTAVVYILAMPDLFYTVQIVY 259 Query: 358 NQTGQAIEIIL---IWMFIYLSLSIMIALFMNRLNAKIALKEK 397 ++ + I +++ +W + L+ I + + R A+ A +++ Sbjct: 260 HRNLEVIPMLMVATVWYLVILTALSAIQVHIERHYARGATRDQ 302 >gi|150377557|ref|YP_001314152.1| polar amino acid ABC transporter, inner membrane subunit [Sinorhizobium medicae WSM419] gi|150032104|gb|ABR64219.1| polar amino acid ABC transporter, inner membrane subunit [Sinorhizobium medicae WSM419] Length = 307 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 52/190 (27%), Positives = 93/190 (48%), Gaps = 21/190 (11%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH----- 245 V +G+VL++ SR F + + + G+P LV + Y L Sbjct: 78 VLGLAIGVVLAIMRLSASRVFQVVS-------WGWIWFFRGVPPLVQMIFWYNLALLLPE 130 Query: 246 ------FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299 F P L +N ++P F + + L+ +A+ AE++R+G+ AV GQ EA Sbjct: 131 ISIGIPFGGPKLLSWN--TNQLITP-FSAAIMGLAFTESAYAAEMIRAGIQAVNAGQTEA 187 Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359 A LG+ + R ++LPQA+R +IPP+ + +++LK +SL + DL+ + + Sbjct: 188 AATLGMKRGQTLRRIVLPQALRIVIPPIGNDTISMLKFTSLVSVLALPDLLYSAQMVYAR 247 Query: 360 TGQAIEIILI 369 T Q + ++L+ Sbjct: 248 TYQTVPLLLV 257 Score = 45.1 bits (105), Expect = 0.021, Method: Compositional matrix adjust. Identities = 30/88 (34%), Positives = 50/88 (56%), Gaps = 3/88 (3%) Query: 81 SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140 ++ ++ AIL G T L F M+ IG ++ RLSA+++ + ++ FR +P Sbjct: 54 AEYMFSPAILSGLGMTLLLTFLAMVLGLAIGVVLAIMRLSASRVFQVVSWGWIWFFRGVP 113 Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFG 168 PLV + F Y L++L +P+ SI +PFG Sbjct: 114 PLVQMIFWYN--LALL-LPEISIGIPFG 138 >gi|319784006|ref|YP_004143482.1| polar amino acid ABC transporter inner membrane subunit [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317169894|gb|ADV13432.1| polar amino acid ABC transporter, inner membrane subunit [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 215 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 52/178 (29%), Positives = 87/178 (48%), Gaps = 13/178 (7%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 + + +Y+S F G P L+ + + L+F P +G + P F + I L Sbjct: 50 RTIGTVYVSLFR--GTPCLIQL---FVLYFGGPQIG-------INLEP-FAAGVIGLGLN 96 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 A++AE +R L+AV RGQ EAA +G + + R V+LPQA R +I PL + LLK Sbjct: 97 IGAYMAESIRGALVAVDRGQTEAARTIGFSRFQTLRKVVLPQAARLMIRPLGVNTVALLK 156 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394 S+L + +L I T + EI + +Y+ + +A ++ L+ + A+ Sbjct: 157 GSALVSTISVVELTYTAQRFIGSTYKPFEIFGVAALLYMIMVYAVARVVDLLDKRFAI 214 >gi|315102984|gb|EFT74960.1| conserved hypothetical protein [Propionibacterium acnes HL050PA2] Length = 198 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 51/152 (33%), Positives = 77/152 (50%), Gaps = 4/152 (2%) Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287 + +GL ++ L ++ F P QF I V + I L A++ EI RS Sbjct: 1 MFWGLLAVLYPTLPIEVPFGGP---QFASIETEKVVTTLATTIIGLDLNENAYLTEITRS 57 Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347 GL +V GQ EAA LG+ R V++PQ MR II PL ++ + +LK +SL +AV F Sbjct: 58 GLESVDVGQTEAAKTLGMKPSLIMRRVIIPQPMRVIILPLGNETIGMLKTTSLVLAVPFT 117 Query: 348 -DLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378 DL I N+ I ++++ F YL ++ Sbjct: 118 LDLQYATSAIANRIYAPIPLLVVTAFWYLVMT 149 >gi|300312809|ref|YP_003776901.1| glutamine ABC transporter permease [Herbaspirillum seropedicae SmR1] gi|300075594|gb|ADJ64993.1| ABC-type glutamine transport system, permease component protein [Herbaspirillum seropedicae SmR1] Length = 218 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 44/144 (30%), Positives = 73/144 (50%), Gaps = 18/144 (12%) Query: 252 GQFNFIGGSTVSPEFMSLYIALSCY------------------TAAFIAEIVRSGLIAVP 293 G F+ G+ + + M +Y AL + A+IAEIVR ++VP Sbjct: 57 GYVEFVRGTPIVVQVMFIYFALPVLLGIRVDPMTAAVTSIVVNSGAYIAEIVRGAFLSVP 116 Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353 RG EA +ALGL + V+ P A+R ++P + +Q++ LK++SL + +G +L G Sbjct: 117 RGLREAGLALGLPVWRVLAFVIGPVAIRRMVPAMGNQFIVSLKDTSLFIVIGVGELTRQG 176 Query: 354 GTIINQTGQAIEIILIWMFIYLSL 377 I+ +A+EI + IYL + Sbjct: 177 QEIMAANFRAVEIWIAVAAIYLCM 200 >gi|290956975|ref|YP_003488157.1| glutamate uptake system [Streptomyces scabiei 87.22] gi|260646501|emb|CBG69598.1| glutamate uptake system [Streptomyces scabiei 87.22] Length = 295 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 35/98 (35%), Positives = 64/98 (65%), Gaps = 1/98 (1%) Query: 260 STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319 +T + ++ L Y A+ +AE+VR+G++A+P+GQ EAA A+GL + +LLPQA Sbjct: 133 TTEQRQLWAVVAGLVLYNASVLAEVVRAGILALPKGQTEAAQAIGLRKGQTMSFILLPQA 192 Query: 320 MRSIIPPLTSQYLNLLKNSSL-AVAVGFADLVSVGGTI 356 + ++P + SQ + ++K+++L V +GF +L+S T+ Sbjct: 193 VTVMLPAIVSQLVVIVKDTALGGVMIGFTELLSGRATL 230 >gi|257869938|ref|ZP_05649591.1| amino acid ABC transporter [Enterococcus gallinarum EG2] gi|257804102|gb|EEV32924.1| amino acid ABC transporter [Enterococcus gallinarum EG2] Length = 489 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 28/67 (41%), Positives = 52/67 (77%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IAL+ +AA++AEI+R+G+ AV +GQ+EAA +LG+ +A R ++ PQA+++I+P L ++ Sbjct: 364 IALALNSAAYVAEIIRAGINAVNKGQLEAARSLGMNQVQAMRFIIFPQAIKNILPALGNE 423 Query: 331 YLNLLKN 337 ++ ++K Sbjct: 424 FVTVIKE 430 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 28/67 (41%), Positives = 40/67 (59%) Query: 83 SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142 S Y L G T +LAF G++ +I G+L+ +LSA+K++ WI VY+E R P L Sbjct: 280 SKYLPFYLSGAGYTIFLAFVGVLFGSIAGSLLAFMKLSASKILRWIAIVYIEYVRGTPLL 339 Query: 143 VVIFFLY 149 V IF +Y Sbjct: 340 VQIFIVY 346 >gi|302550658|ref|ZP_07303000.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces viridochromogenes DSM 40736] gi|302468276|gb|EFL31369.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces viridochromogenes DSM 40736] Length = 300 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 62/236 (26%), Positives = 115/236 (48%), Gaps = 33/236 (13%) Query: 168 GMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL-----FATRLSRHFHEKTGKALPLL 222 G++LN R L + A + V ++ I +L F R + + LPL+ Sbjct: 89 GLWLNVR------LLLVCGAAVLVLGMLIAIARTLRGPVFFPLRALAAAYTDFFRGLPLI 142 Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282 ++ G+P AL+ Q PVL +GG+ AL+ +A++A Sbjct: 143 INLMIVVLGVP-----ALRLQGVTVDPVL-----LGGT-----------ALTLTYSAYVA 181 Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342 E+ R+G+ +V Q AA +LGL++R+A R V+LPQA+R +PPL + ++L K++ L Sbjct: 182 EVFRAGIESVHPSQRAAARSLGLSNRQALRYVVLPQAVRRQVPPLLNDLVSLQKDTGLVS 241 Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 G D V I+ ++ I+ + ++++L+I + F + + A++ + + Sbjct: 242 IGGAVDAVRAADIIVGRSLNYTPYIVAGL-VFVALTIPMTRFTDWVTARMDRRRAQ 296 >gi|165977040|ref|YP_001652633.1| ABC-type amino acid transport system, permease component [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|165877141|gb|ABY70189.1| ABC-type amino acid transport system, permease component [Actinobacillus pleuropneumoniae serovar 3 str. JL03] Length = 217 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 49/171 (28%), Positives = 92/171 (53%), Gaps = 19/171 (11%) Query: 193 SFVLGIVLS-----LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247 SF++G+ ++ + T ++ H + A+ +YIS +I G P LV I++ + + Sbjct: 21 SFIIGMAIAVGVALIRVTPVNGMLH-RIALAIVKVYIS--IIRGTPMLVQISVVF---YG 74 Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307 P +G + + P + I S A+ +E VR+ + +VP+GQ EA +G+T+ Sbjct: 75 LPAIGVY-------IDP-IPAAIIGFSLNIGAYGSETVRAAISSVPKGQWEAGYTIGMTY 126 Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN 358 + R ++ PQA+R +IPPL++ ++ L K++SLA V ++ V + N Sbjct: 127 MQTFRWIIAPQAIRVVIPPLSNTFIGLFKDTSLASVVTVTEMFRVAQQMAN 177 >gi|251788516|ref|YP_003003237.1| polar amino acid ABC transporter inner membrane subunit [Dickeya zeae Ech1591] gi|247537137|gb|ACT05758.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya zeae Ech1591] Length = 218 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 39/108 (36%), Positives = 61/108 (56%), Gaps = 1/108 (0%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G VSP + + +AL+ +T+AF+ +I + A+PRGQ EA LGLT + V+ PQ Sbjct: 80 GIDVSP-WTAAALALTLFTSAFLVDIWHGSVQALPRGQWEACRCLGLTFTQTLTRVIAPQ 138 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 AMR I P + ++K ++LA +GF +L G + N T Q ++ Sbjct: 139 AMRIAIAPTVGFSVQVIKGTALASIIGFVELTKAGTMLNNVTYQPFKV 186 >gi|254386080|ref|ZP_05001394.1| glutamate transporter permease [Streptomyces sp. Mg1] gi|194344939|gb|EDX25905.1| glutamate transporter permease [Streptomyces sp. Mg1] Length = 297 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 43/120 (35%), Positives = 70/120 (58%), Gaps = 4/120 (3%) Query: 260 STVSPEFMSLY---IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316 S+VS + LY L Y +A IAEIVR+G+ ++PRGQ +AA A+G+ + VL+ Sbjct: 131 SSVSSDLRPLYAVVTGLVLYNSAVIAEIVRAGVQSLPRGQADAAKAIGMRKGQTMVHVLI 190 Query: 317 PQAMRSIIPPLTSQYLNLLKNSSL-AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375 PQA+ +++P L SQ + +LK+++L +G A+L+S+ I I + IY+ Sbjct: 191 PQAVTAMLPALVSQLVVILKDTALGGTLLGLAELLSMARQISANYSNTIATFTVIALIYI 250 Score = 45.4 bits (106), Expect = 0.017, Method: Compositional matrix adjust. Identities = 32/106 (30%), Positives = 52/106 (49%), Gaps = 2/106 (1%) Query: 43 WCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILV-GFVNTFWLAF 101 W + V+ + L +G +SE+ E D+ P+ +DS T L+ G + T Sbjct: 18 WIYSGVFVVLFALVLWWALGLMSEKGQLEADK-WTPFVTDSDVWTTFLIPGLLETLKAGV 76 Query: 102 SGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147 ++ A +G L+G GRLS + V +VE FR IP L+++ F Sbjct: 77 IAVVIALPLGALLGIGRLSDHAWVRVPVGAFVEFFRAIPVLMLMLF 122 >gi|167033609|ref|YP_001668840.1| polar amino acid ABC transporter inner membrane subunit [Pseudomonas putida GB-1] gi|166860097|gb|ABY98504.1| polar amino acid ABC transporter, inner membrane subunit [Pseudomonas putida GB-1] Length = 219 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 39/132 (29%), Positives = 74/132 (56%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P + I LS + A + A++++SG+ AV GQ+E A ++GL+ R +++PQA+R Sbjct: 87 PALAAGIIGLSLHFAVYNADVIKSGIEAVDPGQIEGARSIGLSKAMTQRYIIVPQALRKT 146 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 I PL + + LLK++SL +G A+LV +++T E + IY ++++ Sbjct: 147 IAPLGNNLIVLLKDTSLVSIIGIAELVYSAQLAVSETYSPFEFYIAVAVIYYVANLVLEA 206 Query: 384 FMNRLNAKIALK 395 ++ + AK+ + Sbjct: 207 GLHLIEAKVEMS 218 >gi|91787397|ref|YP_548349.1| amino acid ABC transporter permease [Polaromonas sp. JS666] gi|91696622|gb|ABE43451.1| amino acid ABC transporter membrane protein 2, PAAT family [Polaromonas sp. JS666] Length = 212 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 38/121 (31%), Positives = 64/121 (52%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I L+ Y +A++ EI R + A+ +GQ EA+ +L L++ + R V+LPQA R I P Sbjct: 91 ICLTLYASAYLTEIWRGCVNAIHKGQWEASTSLALSYTQQMRHVILPQAWRVAIAPTVGF 150 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 + ++K ++LA +GF +L G I N T Q +Y +L ++ + RL Sbjct: 151 LVQIIKGTALASVIGFVELTKAGQMISNATYQPFLAFTFVGLLYFALCYPLSWWSQRLEN 210 Query: 391 K 391 + Sbjct: 211 R 211 >gi|55820917|ref|YP_139359.1| polar amino acid ABC uptake transporter membrane-spanning protein [Streptococcus thermophilus LMG 18311] gi|55822837|ref|YP_141278.1| amino acid (glutamine) ABC transporter permease [Streptococcus thermophilus CNRZ1066] gi|55736902|gb|AAV60544.1| polar amino acid ABC uptake transporter membrane-spanning protein [Streptococcus thermophilus LMG 18311] gi|55738822|gb|AAV62463.1| amino acid (glutamine) ABC transporter, permease protein [Streptococcus thermophilus CNRZ1066] Length = 213 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 33/91 (36%), Positives = 57/91 (62%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +A + AA+ AEI R G++A+P+GQ EAA L L+ + R ++LPQ ++ ++P + ++ Sbjct: 89 LAFTLNYAAYFAEIFRGGILAIPKGQYEAAKMLKLSPFQTIRYIILPQVVKIVLPSIFNE 148 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361 +NL+K+SSL +G DL+ T N+ Sbjct: 149 IINLVKDSSLVYVLGVGDLLLESRTAANRDA 179 >gi|89898271|ref|YP_515381.1| ABC transporter of amino acids [Chlamydophila felis Fe/C-56] gi|89331643|dbj|BAE81236.1| ABC transporter of amino acids [Chlamydophila felis Fe/C-56] Length = 217 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 59/198 (29%), Positives = 108/198 (54%), Gaps = 18/198 (9%) Query: 195 VLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQF 254 +LG+V+ T SR+F + + + LY++ +I G P + I + Y F P Sbjct: 31 LLGLVI---GTMTSRYFPCRITRWMGNLYVT--VIRGTPLFIQILIFY---FGLP----- 77 Query: 255 NFIGGSTVSPE-FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313 + IG V P M+ IALS ++A++AE +R G+ A+ GQ E+A LG + Sbjct: 78 SIIG---VDPTPLMAGLIALSINSSAYLAENIRGGINALSVGQWESAKVLGYKKSQIFFY 134 Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI 373 ++ PQ ++I+P LT++++ L+K SS+ + VG +L V I+++ +E+ I + Sbjct: 135 IIYPQVFKNILPSLTNEFVALIKESSILMVVGVPELTKVSKDIVSRELNPMEMYSICAGL 194 Query: 374 YLSLSIMIALFMNRLNAK 391 YL ++ + + +++RL K Sbjct: 195 YLFMTSLFS-YVSRLLEK 211 >gi|116627710|ref|YP_820329.1| ABC-type amino acid transport system, permease component [Streptococcus thermophilus LMD-9] gi|116100987|gb|ABJ66133.1| ABC-type amino acid transport system, permease component [Streptococcus thermophilus LMD-9] Length = 213 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 33/91 (36%), Positives = 57/91 (62%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +A + AA+ AEI R G++A+P+GQ EAA L L+ + R ++LPQ ++ ++P + ++ Sbjct: 89 LAFTLNYAAYFAEIFRGGILAIPKGQYEAAKMLKLSPFQTIRYIILPQVVKIVLPSIFNE 148 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361 +NL+K+SSL +G DL+ T N+ Sbjct: 149 IINLVKDSSLVYVLGVGDLLLESRTAANRDA 179 >gi|257438672|ref|ZP_05614427.1| L-cystine ABC transporter, permease protein [Faecalibacterium prausnitzii A2-165] gi|257198901|gb|EEU97185.1| L-cystine ABC transporter, permease protein [Faecalibacterium prausnitzii A2-165] Length = 227 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 40/133 (30%), Positives = 76/133 (57%), Gaps = 7/133 (5%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + IA + A+ AE +R L +VP+GQ+EA +G+T + R ++LPQA+R+ +P Sbjct: 95 FPAAVIAFAFNEGAYCAETMRGALESVPQGQLEAGSCVGMTWWQIMRRIVLPQALRTAVP 154 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 L++ ++++K++SLA + A+L G + +T I++ IY ++++ LF Sbjct: 155 SLSNSLISMIKDTSLASNITVAELFMAGQRVAART-------YIFLPIYCEVAVVYLLFC 207 Query: 386 NRLNAKIALKEKK 398 + AL E++ Sbjct: 208 TIITKLQALVERQ 220 >gi|254386081|ref|ZP_05001395.1| glutamate transporter permease [Streptomyces sp. Mg1] gi|194344940|gb|EDX25906.1| glutamate transporter permease [Streptomyces sp. Mg1] Length = 224 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 35/83 (42%), Positives = 52/83 (62%) Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317 GG+ F + L+ YT F+ E +RSG+ VP GQ EAA ALGL+ + L++LP Sbjct: 85 GGTFKETGFRLAVLGLTAYTGTFVCEALRSGINTVPVGQAEAARALGLSFFQVLTLIVLP 144 Query: 318 QAMRSIIPPLTSQYLNLLKNSSL 340 QA R++I PLT+ + L KN+++ Sbjct: 145 QAFRAVIAPLTNVLIALTKNTTV 167 >gi|85703853|ref|ZP_01034956.1| glutamate/glutamine/aspartate/asparagine ABC transporter, permease protein [Roseovarius sp. 217] gi|85671173|gb|EAQ26031.1| glutamate/glutamine/aspartate/asparagine ABC transporter, permease protein [Roseovarius sp. 217] Length = 429 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 30/82 (36%), Positives = 57/82 (69%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I ++ +++A+IAE++R GL A+PRGQ EA +LGL + ++ +L++LPQA++ IP + + Sbjct: 299 IMITMFSSAYIAEVIRGGLAALPRGQYEAGDSLGLDYAQSMQLIILPQALKISIPGIVNV 358 Query: 331 YLNLLKNSSLAVAVGFADLVSV 352 + L K+++L + D+V + Sbjct: 359 AVGLFKDTTLVSVISMFDIVGM 380 >gi|329770549|ref|ZP_08261927.1| hypothetical protein HMPREF0433_01691 [Gemella sanguinis M325] gi|328836298|gb|EGF85967.1| hypothetical protein HMPREF0433_01691 [Gemella sanguinis M325] Length = 214 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 37/121 (30%), Positives = 70/121 (57%), Gaps = 1/121 (0%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IA + AA+ AEI R G+ ++P+GQ EAA L + R ++LPQ ++ ++P + ++ Sbjct: 89 IAFTLNYAAYFAEIFRGGINSIPKGQYEAAKVLKFNQFQTIRFIILPQVIKIVLPSVFNE 148 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++L+K++SL A+G +DL+ T N+ + + + M IYL L ++ + R+ Sbjct: 149 IMSLVKDTSLVYALGISDLILASRTAANRDASLLPMFVAGM-IYLILIGIVTVVSKRVEK 207 Query: 391 K 391 + Sbjct: 208 R 208 >gi|331005100|ref|ZP_08328503.1| ABC polar amino acid transporter inner membrane protein [gamma proteobacterium IMCC1989] gi|330421069|gb|EGG95332.1| ABC polar amino acid transporter inner membrane protein [gamma proteobacterium IMCC1989] Length = 173 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 35/115 (30%), Positives = 66/115 (57%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P F S I LS YT+A +A++ SG+ AVP A+ +LG+T+ + R ++ P +R++ Sbjct: 43 PAFWSGTIILSIYTSALVAQVALSGIEAVPLTTRRASRSLGMTYWQDMRYIVWPIGLRAV 102 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378 +P L++LK+S+L +G+ +L+ +I +T + ++ + Y +LS Sbjct: 103 LPAWVGVALSVLKDSALVSVIGYTELLKASQILITRTAETFTVLAVAGLFYFALS 157 >gi|222081928|ref|YP_002541293.1| amino acid ABC transporter [Agrobacterium radiobacter K84] gi|221726607|gb|ACM29696.1| amino acid ABC transporter [Agrobacterium radiobacter K84] Length = 217 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 50/170 (29%), Positives = 85/170 (50%), Gaps = 10/170 (5%) Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287 ++ G P LVL+ L Y F +LG F+ + P ++ L Y++ F+ EI R Sbjct: 58 IVQGTPLLVLLFLIY---FGIAILG-FDQV------PAIIAAAAGLIIYSSGFLGEIWRG 107 Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347 + +VP+ Q EAA L L+ + V+LPQA+R PP + ++KN+SLA VGF Sbjct: 108 CIESVPKTQWEAAECLALSRWQRMIKVILPQALRIATPPTVGFLVQIVKNTSLASVVGFV 167 Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 +L G I N + + ++ Y ++ ++L+ L K+ + + Sbjct: 168 ELSQAGKLINNSIFEPFTVFIVVAVFYFAMCFPLSLWSRNLERKLNVANR 217 >gi|160899041|ref|YP_001564623.1| polar amino acid ABC transporter inner membrane protein [Delftia acidovorans SPH-1] gi|160364625|gb|ABX36238.1| polar amino acid ABC transporter, inner membrane subunit [Delftia acidovorans SPH-1] Length = 360 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 41/128 (32%), Positives = 75/128 (58%), Gaps = 3/128 (2%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + L+ ++AA++AE+ R GL AVP+GQ+ AA A+G T + R V+LPQA+R I P S Sbjct: 233 VCLAAFSAAYLAEVFRGGLQAVPQGQVMAAQAMGFTRVQVLRHVVLPQALRVTIAPTVSN 292 Query: 331 YLNLLKNSSLAVAVGFADL---VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387 ++ +K++SL V D+ + + + + +E+ ++ +YL + + IA + Sbjct: 293 FIGAVKDTSLVAIVNIYDITGSLKMAMSDPHWIAYFVEMYMVVCTVYLLIGLGIARYGRF 352 Query: 388 LNAKIALK 395 L ++ AL+ Sbjct: 353 LESRYALQ 360 >gi|119383036|ref|YP_914092.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Paracoccus denitrificans PD1222] gi|119372803|gb|ABL68396.1| hydroxyectoine ABC transporter membrane protein / ectoine ABC transporter membrane protein [Paracoccus denitrificans PD1222] Length = 218 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 57/212 (26%), Positives = 105/212 (49%), Gaps = 22/212 (10%) Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240 LT+ +A V +FV G+ R+SRH + L YI F T + + L Sbjct: 21 LTLMGSALALVVAFVAGL------GRISRH---AAVRWLATAYIEFFR----GTSIFVQL 67 Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300 + ++F P + G+ ++P + +AL A+ AE+VR ++AVPR Q EA Sbjct: 68 -FWIYFVLP-------MTGAELTP-MQAGVMALGLNVGAYGAEVVRGAILAVPRDQHEAC 118 Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 +A+ LT + R ++LPQA+ ++P + + LLK +S+ + +D+ + +QT Sbjct: 119 VAVNLTRFQRMRHIILPQALPLMLPTFGNNAIELLKATSVVSLISLSDMTFQAQVVRSQT 178 Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 G + + + +Y ++S ++ M RL ++ Sbjct: 179 GSTLMPFVTILLLYFAMSSALSFGMRRLERRV 210 Score = 39.3 bits (90), Expect = 1.0, Method: Compositional matrix adjust. Identities = 22/67 (32%), Positives = 34/67 (50%) Query: 83 SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142 + Y T IL+G T L G A ++ + G GR+S + V W+ Y+E FR Sbjct: 5 AGYLTLILMGAWVTVKLTLMGSALALVVAFVAGLGRISRHAAVRWLATAYIEFFRGTSIF 64 Query: 143 VVIFFLY 149 V +F++Y Sbjct: 65 VQLFWIY 71 >gi|302558022|ref|ZP_07310364.1| glutamate permease [Streptomyces griseoflavus Tu4000] gi|302475640|gb|EFL38733.1| glutamate permease [Streptomyces griseoflavus Tu4000] Length = 300 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 37/127 (29%), Positives = 77/127 (60%), Gaps = 1/127 (0%) Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 L Y A+ +AE+VR+G++++P+GQ EAA A+GL + +LLPQA+ ++P + SQ Sbjct: 145 GLVLYNASVLAEVVRAGILSLPKGQGEAAQAIGLRKSQIMGNILLPQAVTVMLPAIVSQL 204 Query: 332 LNLLKNSSL-AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 + ++K+++L V +GF +L++ GT+ + ++ I++ L+ ++ F + L Sbjct: 205 VVIVKDTALGGVMLGFTELLNSRGTLAANYANVVPSFIVVAVIFIVLNFLLTSFASWLEG 264 Query: 391 KIALKEK 397 ++ ++ Sbjct: 265 RLRRSKR 271 >gi|313125640|ref|YP_004035910.1| amino acid ABC transporter membrane protein, paat family [Halogeometricum borinquense DSM 11551] gi|312292005|gb|ADQ66465.1| amino acid ABC transporter membrane protein, PAAT family [Halogeometricum borinquense DSM 11551] Length = 277 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 39/127 (30%), Positives = 73/127 (57%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 EF + IAL+ AA++ E VR G+ +VP GQMEAA +LG+++ ++ R V+LPQA R+ + Sbjct: 143 EFPTAIIALTLNHAAYVGEAVRGGINSVPEGQMEAARSLGMSYIQSMREVILPQAWRNAL 202 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 + + + L+K++SL + +L+ + + ++I YLS++I + Sbjct: 203 AAIGNDQVILVKDTSLMTVIALPELIQQFRDVNSAVFDPWTPLVIVAIAYLSITIPLGKL 262 Query: 385 MNRLNAK 391 ++ L + Sbjct: 263 VDHLENR 269 >gi|298346727|ref|YP_003719414.1| amino acid ABC transporter permease [Mobiluncus curtisii ATCC 43063] gi|304389571|ref|ZP_07371533.1| amino acid ABC superfamily ATP binding cassette transporter permease protein [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|315655272|ref|ZP_07908173.1| amino acid ABC superfamily ATP binding cassette transporter permease protein [Mobiluncus curtisii ATCC 51333] gi|315656814|ref|ZP_07909701.1| amino acid ABC superfamily ATP binding cassette transporter permease protein [Mobiluncus curtisii subsp. holmesii ATCC 35242] gi|298236788|gb|ADI67920.1| amino acid ABC superfamily ATP binding cassette transporter permease protein [Mobiluncus curtisii ATCC 43063] gi|304327124|gb|EFL94360.1| amino acid ABC superfamily ATP binding cassette transporter permease protein [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|315490527|gb|EFU80151.1| amino acid ABC superfamily ATP binding cassette transporter permease protein [Mobiluncus curtisii ATCC 51333] gi|315492769|gb|EFU82373.1| amino acid ABC superfamily ATP binding cassette transporter permease protein [Mobiluncus curtisii subsp. holmesii ATCC 35242] Length = 307 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 35/81 (43%), Positives = 51/81 (62%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F S + L A++AEIVR+GL +V GQ EAA ALG+ R +++PQAMR I+P Sbjct: 148 FWSAMLGLGLNEGAYLAEIVRAGLNSVNPGQWEAATALGMKRSMILRRIVIPQAMRVIVP 207 Query: 326 PLTSQYLNLLKNSSLAVAVGF 346 P ++ +++LK +SL V F Sbjct: 208 PTGNETISMLKTTSLVSVVPF 228 >gi|319942093|ref|ZP_08016412.1| hypothetical protein HMPREF9464_01631 [Sutterella wadsworthensis 3_1_45B] gi|319804477|gb|EFW01355.1| hypothetical protein HMPREF9464_01631 [Sutterella wadsworthensis 3_1_45B] Length = 225 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 41/132 (31%), Positives = 73/132 (55%), Gaps = 1/132 (0%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 + S I + + + ++VR LI++P+ Q E+A LGL+ + RLV+LPQA+R +IP Sbjct: 92 YWSAIIVFTFWGTGEMGDLVRGALISIPKTQYESAQVLGLSKLQTMRLVVLPQAVRQLIP 151 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 P + ++K +SL V +G +++ G II+ +W++ + L +A + Sbjct: 152 PSINLITRMIKTTSLVVLIGIVEVLKTGQQIIDANRFEYPTAALWVYGAVFLLYFLACWP 211 Query: 386 NRLNAKIALKEK 397 L AK AL++K Sbjct: 212 VSLAAK-ALEKK 222 >gi|331267078|ref|YP_004326708.1| ABC transporter, membrane-spanning permease-amino acid transport [Streptococcus oralis Uo5] gi|326683750|emb|CBZ01368.1| ABC transporter, membrane-spanning permease-amino acid transport [Streptococcus oralis Uo5] Length = 230 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 28/82 (34%), Positives = 55/82 (67%) Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 AA +AE+ ++ A+P+GQ EA +++GLT + ++ PQA + +P +T+ LNL+++ Sbjct: 109 AAIVAEVFKAAYQAIPKGQTEAGLSIGLTPSQTFWRIIFPQAFQVALPNITTAILNLMRD 168 Query: 338 SSLAVAVGFADLVSVGGTIINQ 359 ++LA +GF D++ G +I++ Sbjct: 169 AALAYTIGFVDVMGAGNLLISR 190 >gi|307727665|ref|YP_003910878.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia sp. CCGE1003] gi|307588190|gb|ADN61587.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. CCGE1003] Length = 216 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 45/133 (33%), Positives = 73/133 (54%), Gaps = 2/133 (1%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P ++ A+S +A++IAEI+R G +++P G +EAA LGL+ R +L+PQA R Sbjct: 85 PPLVAAISAVSLCSASYIAEILRGGFLSIPPGHIEAARMLGLSPFDTLRRILVPQAFRLT 144 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 +P L ++ + L+K SSL VG A+L I T + +E + IY + +AL Sbjct: 145 LPSLVNEMVLLIKASSLISVVGVAELTRTAQNIAASTYRPLEAYVAAGLIYFVICGALAL 204 Query: 384 FMNRLNAKIALKE 396 + A+ LK+ Sbjct: 205 VAH--AAEYRLKQ 215 >gi|237808616|ref|YP_002893056.1| polar amino acid ABC transporter, inner membrane subunit [Tolumonas auensis DSM 9187] gi|237500877|gb|ACQ93470.1| polar amino acid ABC transporter, inner membrane subunit [Tolumonas auensis DSM 9187] Length = 520 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 58/200 (29%), Positives = 100/200 (50%), Gaps = 14/200 (7%) Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL 228 +F N L ++ + ++ V G+VL+L ++ H + L YI +L Sbjct: 11 LFQNQDFWDASLLVVELSVATWLGGIVFGMVLAL-----AKQSHYRPLSWLAGSYI--WL 63 Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288 LP LVLI Y + QF +S F + +A+ +A+IAEI R G Sbjct: 64 FRSLPLLVLIIFIYNV-------PQFVPSSSDLLSSPFTAGLLAMILSESAYIAEIHRGG 116 Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348 L++V RGQ EA ALG+ RL+++PQA + +P L ++++ ++K +SL + A+ Sbjct: 117 LLSVHRGQTEAGRALGMRFIGIQRLIIIPQAFKIALPSLANEFVTIVKLTSLVSVISLAE 176 Query: 349 LVSVGGTIINQTGQAIEIIL 368 ++ VG + Q + +E +L Sbjct: 177 ILMVGQRLYTQNFKVMETLL 196 >gi|160895677|ref|YP_001561259.1| polar amino acid ABC transporter inner membrane protein [Delftia acidovorans SPH-1] gi|160361261|gb|ABX32874.1| polar amino acid ABC transporter, inner membrane subunit [Delftia acidovorans SPH-1] Length = 217 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 41/136 (30%), Positives = 77/136 (56%), Gaps = 1/136 (0%) Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316 + G +SP + + I L+ YT+A++AE+ R + ++P GQ EA+ +L + + + R V+L Sbjct: 79 MAGLDISP-WTAAAIGLTLYTSAYLAEVWRGCVESIPSGQWEASSSLAMGYLQQMRHVVL 137 Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376 PQA+R I P + ++K +++A +GF++L +G + N T Q I + Y Sbjct: 138 PQALRLSIAPTVGFSVQIIKGTAVASIIGFSELTKLGSMLANATFQPFLIYGLVAAGYFL 197 Query: 377 LSIMIALFMNRLNAKI 392 L ++L+ + L K+ Sbjct: 198 LCWPLSLYASHLEKKL 213 >gi|66046798|ref|YP_236639.1| amino acid ABC transporter permease [Pseudomonas syringae pv. syringae B728a] gi|63257505|gb|AAY38601.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Pseudomonas syringae pv. syringae B728a] gi|330897283|gb|EGH28702.1| amino acid ABC transporter permease [Pseudomonas syringae pv. japonica str. M301072PT] gi|330953617|gb|EGH53877.1| amino acid ABC transporter permease [Pseudomonas syringae Cit 7] gi|330972267|gb|EGH72333.1| amino acid ABC transporter permease [Pseudomonas syringae pv. aceris str. M302273PT] Length = 232 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 52/167 (31%), Positives = 86/167 (51%), Gaps = 11/167 (6%) Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL----YIALSCYTA 278 ++ T++I G P LV + L Y L QF+ + S + P S +A + T+ Sbjct: 56 WLYTYVIRGTPMLVQLFLIYY------GLAQFDAVRESFLWPWLSSATFCACLAFTINTS 109 Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338 A+ AEI+ L A P G++EAA A+G++ K R +LLP A+R +P +++ + +L+ + Sbjct: 110 AYTAEIIAGSLKATPAGEIEAARAMGMSKAKMYRRILLPSALRRALPQYSNEVIMMLQTT 169 Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS-IMIALF 384 SLA V D+ T+ Q E + YL L+ I++ LF Sbjct: 170 SLASIVTLIDITGAARTVNAQFYLPFEAYITAGVFYLGLTFILVRLF 216 >gi|328887002|emb|CCA60241.1| glutamate permease [Streptomyces venezuelae ATCC 10712] Length = 304 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 36/96 (37%), Positives = 65/96 (67%), Gaps = 4/96 (4%) Query: 260 STVSPEFMSLY---IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316 + +SPE LY L Y A+ +AE+VR+G++A+P GQ +AA A+G+ + VLL Sbjct: 134 TDISPETRPLYAVVTGLVLYNASVLAEVVRAGILALPTGQTDAAKAIGMRKGQTMTYVLL 193 Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVA-VGFADLVS 351 PQ++ +++P L SQ + ++K+++L A +GF++L++ Sbjct: 194 PQSVTAMLPALVSQLVVIVKDTALGGALLGFSELLA 229 Score = 36.6 bits (83), Expect = 6.6, Method: Compositional matrix adjust. Identities = 24/69 (34%), Positives = 35/69 (50%) Query: 79 YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138 +T + T IL NT A M+ A +G L+G RLS ++ V + VE FR Sbjct: 57 FTDGRVWDTYILPALKNTVIAAGLAMVIALPLGALLGVSRLSDHRSVRVVAGTVVEFFRA 116 Query: 139 IPPLVVIFF 147 IP L+++ F Sbjct: 117 IPVLILMLF 125 >gi|294670249|ref|ZP_06735142.1| glutamine/glutamate ABC transporter, permease protein [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291307986|gb|EFE49229.1| glutamine/glutamate ABC transporter, permease protein [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 251 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 40/105 (38%), Positives = 63/105 (60%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IAL+ A+++AE +R+G++AVP+GQ+EA A+GL + R V LPQA +P + + Sbjct: 123 IALTFLGASYMAEALRAGILAVPKGQIEAGKAIGLNRFQIFRYVELPQAWAVAVPAIGAN 182 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375 L L+K +S+ AVG A+L+ V II + E + + YL Sbjct: 183 ILFLMKETSVVSAVGIAELLFVTKDIIGMDYKTNEALFLLFASYL 227 >gi|241206674|ref|YP_002977770.1| polar amino acid ABC transcriptional regulator inner membrane protein [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240860564|gb|ACS58231.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 222 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 60/204 (29%), Positives = 94/204 (46%), Gaps = 34/204 (16%) Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRH----------FHEKTGKALPLLYISTFLIFGLPT 234 T + V + VLGIVLS+ R + + + P L F+ FGLP+ Sbjct: 23 TTLALTVSTSVLGIVLSILGAAARRGPYPWLRKVVGLYVEIMRNTPFLVQLFFIFFGLPS 82 Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294 L G + P + +A++ AA+ E+V +GL A+PR Sbjct: 83 L-----------------------GIRLDP-ITAAVLAMTLNMAAYTIEVVGAGLDAIPR 118 Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354 GQ EAA ALGL R ++LPQA+ I P LTSQ + ++ S++ + +L Sbjct: 119 GQKEAAQALGLRPRLVFFKIILPQAIAIIFPALTSQIIIMMLESAVVSQISVRELAQEAD 178 Query: 355 TIINQTGQAIEIILIWMFIYLSLS 378 + ++T ++ E L+ IYLS+S Sbjct: 179 LLQSRTFRSFETYLVATLIYLSMS 202 >gi|126737935|ref|ZP_01753665.1| ABC-type amino acid transport system, permease component [Roseobacter sp. SK209-2-6] gi|126721328|gb|EBA18032.1| ABC-type amino acid transport system, permease component [Roseobacter sp. SK209-2-6] Length = 222 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 42/141 (29%), Positives = 82/141 (58%), Gaps = 5/141 (3%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G +SP +MS IA+ + + +++E+ R G+ +VP+GQ EAAIAL +T + R V++PQ Sbjct: 83 GIRLSP-WMSGMIAIGLHYSCYLSEVYRGGIDSVPKGQWEAAIALNMTTVQKYRRVIIPQ 141 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378 A+ S + + + + + K++ + +G A+L+ I ++ + +E + I+L++S Sbjct: 142 AIPSALSGMGNYLVGIFKDTPMLSVIGVAELIHTANAIGSEHYRFLEPFTMVGIIFLAIS 201 Query: 379 I----MIALFMNRLNAKIALK 395 + +I L R+ K+ LK Sbjct: 202 LPAAGLIRLVEGRVRRKLGLK 222 >gi|120401318|ref|YP_951147.1| polar amino acid ABC transporter inner membrane subunit [Mycobacterium vanbaalenii PYR-1] gi|119954136|gb|ABM11141.1| amino acid ABC transporter membrane protein, PAAT family / amino acid ABC transporter ATP-binding protein, PAAT family [Mycobacterium vanbaalenii PYR-1] Length = 510 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 41/120 (34%), Positives = 68/120 (56%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P + +AL+ A FI+EI+RSG+ V GQ A ALGL RK R V+ PQA RS+ Sbjct: 84 PPVAAGSVALAMNEAVFISEILRSGIKGVDPGQSLAGRALGLEPRKLMRRVIAPQAFRSM 143 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 +P L +++++ +KNS+LA + +L + + T I +YL+L+ ++++ Sbjct: 144 VPALGNEFISTMKNSALASVIAVPELTLRTQQLASSTFDYFSIYFATAVMYLALTAVLSI 203 >gi|307257777|ref|ZP_07539534.1| Binding-protein-dependent transport system inner membrane component family protein [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|306863683|gb|EFM95609.1| Binding-protein-dependent transport system inner membrane component family protein [Actinobacillus pleuropneumoniae serovar 10 str. D13039] Length = 219 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 44/121 (36%), Positives = 67/121 (55%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IAL A+++AE +R+GL+AVP+GQ EAA A+GL + R V+ PQA IP + + Sbjct: 91 IALVFLGASYMAEALRAGLLAVPKGQTEAAKAIGLNRFQVFRYVIFPQAWAVSIPAIGAN 150 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 L L+K +S+ AV A+L+ V II + E + + YL + + I+L Sbjct: 151 VLFLIKETSVISAVAVAELMFVTKDIIGMDYKTNEALFLLFASYLVILLPISLLARHFEN 210 Query: 391 K 391 K Sbjct: 211 K 211 >gi|170694836|ref|ZP_02885986.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia graminis C4D1M] gi|170140196|gb|EDT08374.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia graminis C4D1M] Length = 265 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 40/108 (37%), Positives = 67/108 (62%), Gaps = 13/108 (12%) Query: 259 GSTVSPEFMSLY---------IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309 G ++P +SL+ +AL+ ++A+IAEI RSG+ +V R QM A ALG+T+ Sbjct: 82 GQGLAPVGLSLFGPNPYPLAIVALALVSSAYIAEIFRSGIQSVGRRQMSACQALGMTYWS 141 Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF----ADLVSVG 353 R V++PQ +R I+P L +Q+++++K+SSL +G DL ++G Sbjct: 142 GMRHVIVPQGVRRILPALANQFISIVKDSSLVYFLGLLTSQRDLFTIG 189 >gi|91778560|ref|YP_553768.1| polar amino acid ABC transporter inner membrane protein [Burkholderia xenovorans LB400] gi|91691220|gb|ABE34418.1| amino acid ABC transporter membrane protein 2, PAAT family [Burkholderia xenovorans LB400] Length = 247 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 33/85 (38%), Positives = 58/85 (68%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P ++ ALS A+++ V +G+++V GQ +AA++LGLT +A R V+LPQA+R + Sbjct: 94 PGLAAVVCALSLIGGAYLSHAVHAGIVSVGAGQQQAALSLGLTRWQALRYVVLPQAVRIM 153 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFAD 348 +P +Q+++L+K++SLA VG + Sbjct: 154 MPSFVNQWVSLVKDTSLAYIVGVPE 178 >gi|88800985|ref|ZP_01116535.1| ABC-type arginine transport system, permease component [Reinekea sp. MED297] gi|88776252|gb|EAR07477.1| ABC-type arginine transport system, permease component [Reinekea sp. MED297] Length = 235 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 56/219 (25%), Positives = 106/219 (48%), Gaps = 20/219 (9%) Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240 LTM+ A V +F LG++ ++ +LS++ + + Y T +I G+P LV + L Sbjct: 17 LTMELAALSLVLAFTLGLLGAM--GKLSKN---RMANGVATTY--TTIIRGVPDLVWMML 69 Query: 241 KYQLHFDKPVL--GQFNFIGGSTVSP--------EFMSLYIALSCYTAAFIAEIVRSGLI 290 L+F ++ F+++ +T EF+S + + A++ E R + Sbjct: 70 ---LYFGGQIMVNAFFDWLYNATDGQIDIFFPFNEFLSGVLTIGFIFGAYMTETFRGAFM 126 Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 AV GQ+EA A G++ + R + PQ MR +P + + + LLK ++L +G AD+V Sbjct: 127 AVDAGQIEAGKAYGMSSWQIFRRISFPQMMRHALPGIANNWQVLLKTTALVSIIGLADMV 186 Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 + TG+ + + +YL ++ + + +LN Sbjct: 187 RLATEAAKSTGEPFKFFIPVAIVYLGIAALSDVLFKKLN 225 >gi|320323221|gb|EFW79309.1| arginine/ornithine ABC transporter, permease protein [Pseudomonas syringae pv. glycinea str. B076] gi|320329748|gb|EFW85737.1| arginine/ornithine ABC transporter, permease protein [Pseudomonas syringae pv. glycinea str. race 4] gi|330881453|gb|EGH15602.1| arginine/ornithine ABC transporter permease [Pseudomonas syringae pv. glycinea str. race 4] Length = 232 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 52/167 (31%), Positives = 86/167 (51%), Gaps = 11/167 (6%) Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL----YIALSCYTA 278 ++ T++I G P LV + L Y L QF+ + S + P S +A + T+ Sbjct: 56 WLYTYVIRGTPMLVQLFLIYY------GLAQFDAVRESFLWPWLSSATFCACLAFTINTS 109 Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338 A+ AEI+ L A P G++EAA A+G++ K R +LLP A+R +P +++ + +L+ + Sbjct: 110 AYTAEIIAGSLKATPAGEIEAARAMGMSKAKMYRRILLPSALRRALPQYSNEVIMMLQTT 169 Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS-IMIALF 384 SLA V D+ T+ Q E + YL L+ I++ LF Sbjct: 170 SLASIVTLIDITGAARTVNAQFYLPFEAYVTAGVFYLCLTFILVRLF 216 >gi|239833797|ref|ZP_04682125.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium LMG 3301] gi|239821860|gb|EEQ93429.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium LMG 3301] Length = 241 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 61/193 (31%), Positives = 95/193 (49%), Gaps = 18/193 (9%) Query: 204 ATRLSRHFHEK-TGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV 262 A +LSR + + G A Y+S F G P L+ + + L+F P +G + Sbjct: 66 AAKLSRFWPLRFIGAA----YVSVFR--GTPCLLQL---FVLYFGGPQIG-------INL 109 Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322 P F + I L A+ AE +R ++ V GQ EAA ++G + ++ R V+LPQA R Sbjct: 110 EP-FAAGAIGLGLNIGAYYAEAMRGAILTVDAGQNEAARSIGFSSGQSMRFVVLPQAARL 168 Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382 +I L + L+K S+L A+ +L I T + EI I IY+ L ++A Sbjct: 169 MIRSLGVNTVMLIKGSALVSAISVVELTYTAQRFIGSTYRPFEIFGIAAAIYMVLIYIVA 228 Query: 383 LFMNRLNAKIALK 395 F++ L A+ ALK Sbjct: 229 RFVDFLEARYALK 241 >gi|237799097|ref|ZP_04587558.1| arginine/ornithine ABC transporter permease [Pseudomonas syringae pv. oryzae str. 1_6] gi|331021951|gb|EGI02008.1| arginine/ornithine ABC transporter permease [Pseudomonas syringae pv. oryzae str. 1_6] Length = 232 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 52/167 (31%), Positives = 86/167 (51%), Gaps = 11/167 (6%) Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL----YIALSCYTA 278 ++ T++I G P LV + L Y L QF+ + S + P S +A + T+ Sbjct: 56 WLYTYVIRGTPMLVQLFLIYY------GLAQFDAVRESFLWPWLSSATFCACLAFAINTS 109 Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338 A+ AEI+ L A P G++EAA A+G++ K R +LLP A+R +P +++ + +L+ + Sbjct: 110 AYTAEIIAGSLKATPAGEIEAARAMGMSKAKMYRRILLPSALRRALPQYSNEVIMMLQTT 169 Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS-IMIALF 384 SLA V D+ T+ Q E + YL L+ I++ LF Sbjct: 170 SLASIVTLIDITGAARTVNAQFYLPFEAYITAGVFYLCLTFILVRLF 216 >gi|307255512|ref|ZP_07537318.1| Amino acid ABC transporter, permease protein [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|307257682|ref|ZP_07539441.1| Amino acid ABC transporter, permease protein [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|307259963|ref|ZP_07541676.1| Amino acid ABC transporter, permease protein [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|306861554|gb|EFM93542.1| Amino acid ABC transporter, permease protein [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306863857|gb|EFM95781.1| Amino acid ABC transporter, permease protein [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|306865991|gb|EFM97866.1| Amino acid ABC transporter, permease protein [Actinobacillus pleuropneumoniae serovar 11 str. 56153] Length = 238 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 49/173 (28%), Positives = 93/173 (53%), Gaps = 19/173 (10%) Query: 193 SFVLGIVLS-----LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247 SF++G+ ++ + T ++ H + A+ +YIS +I G P LV I++ + + Sbjct: 42 SFIIGMAIAVGVALIRVTPVNGMLH-RIALAIVKVYIS--IIRGTPMLVQISVVF---YG 95 Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307 P +G + + P + I S A+ +E VR+ + +VP+GQ EA +G+T+ Sbjct: 96 LPAIGVY-------IDP-IPAAIIGFSLNIGAYGSETVRAAISSVPKGQWEAGYTIGMTY 147 Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 + R ++ PQA+R +IPPL++ ++ L K++SLA V ++ V + N + Sbjct: 148 MQTFRRIIAPQAIRVVIPPLSNTFIGLFKDTSLASVVTVTEMFRVAQQMANMS 200 >gi|307299191|ref|ZP_07578992.1| polar amino acid ABC transporter, inner membrane subunit [Thermotogales bacterium mesG1.Ag.4.2] gi|306914987|gb|EFN45373.1| polar amino acid ABC transporter, inner membrane subunit [Thermotogales bacterium mesG1.Ag.4.2] Length = 223 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 53/186 (28%), Positives = 98/186 (52%), Gaps = 18/186 (9%) Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240 +T++ V F++G++L++ ++ FH G A ++ I I G P LV + Sbjct: 21 VTLEMTLIAVVIGFIIGVILAIARVYGNKLFH---GVATAIIEI----IRGTPLLVQL-- 71 Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300 + L++ P LG +SP F + I + + + AE +R + ++ QM+AA Sbjct: 72 -FILYYGLPPLGM-------NLSP-FAAAIIGFAINSGCYQAEYLRGSIQSISGNQMKAA 122 Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 +LG+T +A +++PQA R +IP T++++ LLK +SLA VG +L++ I ++ Sbjct: 123 RSLGMTKWQAILQIIMPQAFRRVIPAWTNEFIYLLKYTSLAYIVGAPELMAQAKFIASRN 182 Query: 361 GQAIEI 366 Q E+ Sbjct: 183 FQFFEV 188 >gi|307262179|ref|ZP_07543830.1| Binding-protein-dependent transport system inner membrane component family protein [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|306868156|gb|EFM99981.1| Binding-protein-dependent transport system inner membrane component family protein [Actinobacillus pleuropneumoniae serovar 12 str. 1096] Length = 219 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 44/121 (36%), Positives = 67/121 (55%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IAL A+++AE +R+GL+AVP+GQ EAA A+GL + R V+ PQA IP + + Sbjct: 91 IALVFLGASYMAEALRAGLLAVPKGQTEAAKAIGLNRFQVFRYVIFPQAWAVSIPAIGAN 150 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 L L+K +S+ AV A+L+ V II + E + + YL + + I+L Sbjct: 151 VLFLIKETSVISAVAVAELMFVTKDIIGMDYKTNEALFLLFASYLVILLPISLLARHFEN 210 Query: 391 K 391 K Sbjct: 211 K 211 >gi|256784800|ref|ZP_05523231.1| glutamate permease [Streptomyces lividans TK24] Length = 205 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 46/126 (36%), Positives = 76/126 (60%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + L YT+AF+ E +RSG+ VP GQ EAA A+GL+ + RLV+LPQA RS + PL + Sbjct: 80 LGLVLYTSAFVCEALRSGINTVPVGQAEAARAIGLSFGQVLRLVVLPQAFRSTVGPLANV 139 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 + L+KN+++A A+G A+ ++ +I Q + I I ++ L++ L + + Sbjct: 140 LIALIKNTTVAAAIGVAEAAALMKDMIENEAQLLLISAIIAVGFVILTLPTGLILGWVGK 199 Query: 391 KIALKE 396 K+A+K Sbjct: 200 KVAVKR 205 >gi|167563744|ref|ZP_02356660.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Burkholderia oklahomensis EO147] Length = 219 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 57/207 (27%), Positives = 106/207 (51%), Gaps = 14/207 (6%) Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247 K V S VLG+++ L + R + + A+ Y+S L+ G P LV + + +++ Sbjct: 23 KFAVASMVLGLIVGLVVA-IVRIGNNRILSAVAQGYVS--LMRGTPLLVQM---FVVYYG 76 Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307 P +G ++ P ++ L+ A+++E +R ++ + RGQ A+ +LGLTH Sbjct: 77 LPDIG-------ISLDPTSAGIF-TLTLNAGAYLSESMRGAILGIGRGQWAASHSLGLTH 128 Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367 + R V+ PQA+R +P L + ++L+K++SL + +L+ +I T Q + + Sbjct: 129 VQTLRHVVCPQALRLAVPSLGNTLISLIKDTSLVSVITVTELLRSTQEVIASTFQPLPLY 188 Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIAL 394 L IY LS ++A R+ + AL Sbjct: 189 LAAAAIYWVLSTLLARLQGRIETRCAL 215 >gi|295697136|ref|YP_003590374.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus tusciae DSM 2912] gi|295412738|gb|ADG07230.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus tusciae DSM 2912] Length = 214 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 43/128 (33%), Positives = 71/128 (55%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + I LS Y A+ E+ R+GL ++P Q EA+ ALG++ R V+LPQA+ +I+P Sbjct: 84 FTAAAIWLSAYGGAYAVELFRAGLHSIPHEQREASAALGISRWTTLRKVILPQALATILP 143 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 + S + +KNSSLA +G D++ +N T QA + L+ + Y L+ ++ Sbjct: 144 AMVSFLVLQVKNSSLAFTIGVMDIMRRAELGVNATSQATLLYLMAVAAYFILNFPLSRLG 203 Query: 386 NRLNAKIA 393 L ++A Sbjct: 204 IALERRVA 211 >gi|302379711|ref|ZP_07268196.1| ABC transporter, permease protein [Finegoldia magna ACS-171-V-Col3] gi|302312618|gb|EFK94614.1| ABC transporter, permease protein [Finegoldia magna ACS-171-V-Col3] Length = 526 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 39/120 (32%), Positives = 72/120 (60%), Gaps = 1/120 (0%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G ++P +L+I +S T A+++E+VR G+ +V GQMEA ALG+TH ++ V+LPQ Sbjct: 376 GIDMAPISAALFI-VSVNTGAYLSEVVRGGINSVDVGQMEACKALGMTHSQSMINVILPQ 434 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378 A+++I+P + ++++ +K++S+ + +L V +I T E + IY L+ Sbjct: 435 AIKNILPSIGNEFVINIKDTSVLNVISVTELFFVSKSIAGSTYNIFETYAVTCVIYFVLT 494 >gi|288961242|ref|YP_003451581.1| polar amino acid transport system permease protein [Azospirillum sp. B510] gi|288913550|dbj|BAI75037.1| polar amino acid transport system permease protein [Azospirillum sp. B510] Length = 243 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 48/156 (30%), Positives = 83/156 (53%), Gaps = 3/156 (1%) Query: 227 FLIFGLPTLV-LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285 F+ G P L+ L + Y L +P L + S + +A++ TAA+ +EI+ Sbjct: 58 FVFRGTPLLIQLFMIYYGLGQFRPALQELGLW--SFFRDPYWCAVLAMAMNTAAYSSEII 115 Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345 R GL +VP G +EAA A G+ R ++LP A+R +P ++ + + K +SLA + Sbjct: 116 RGGLNSVPPGALEAASACGMRPLMRLRRIVLPLAIRQALPAYGNELVLMAKATSLASTIT 175 Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 ++ + G +I QT +A+EI IYL+L+ ++ Sbjct: 176 LMEVTGLAGKMIAQTYRAVEIFACAGIIYLALTFIL 211 >gi|222102717|ref|YP_002539756.1| ABC transporter membrane spanning protein [Agrobacterium vitis S4] gi|221739318|gb|ACM40051.1| ABC transporter membrane spanning protein [Agrobacterium vitis S4] Length = 240 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 36/88 (40%), Positives = 56/88 (63%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F++ I+L + E++R ++AV RGQ EAA A+GLT ++A LV++PQ + +P Sbjct: 107 FIAAAISLGVVQGGYSTEVLRGAIVAVARGQTEAAFAVGLTRKQAFFLVIIPQMLPLALP 166 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVG 353 L + +L +LK SSL +GF +LV VG Sbjct: 167 GLGNLWLIVLKESSLVSLIGFTELVLVG 194 >gi|209516392|ref|ZP_03265248.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. H160] gi|209503154|gb|EEA03154.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. H160] Length = 216 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 44/125 (35%), Positives = 68/125 (54%), Gaps = 1/125 (0%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G VSP ++ C +A++IAEI+R G +++P G +EAA LGL+ R +L+PQ Sbjct: 81 GINVSPAVAAISTVSLC-SASYIAEILRGGFLSIPPGHLEAARMLGLSPLDTLRRILVPQ 139 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378 A R +P L ++ + L+K SSL VG A+L I T + +E + IY + Sbjct: 140 AFRLTLPSLVNEMVLLIKASSLISVVGVAELTRTAQNIAASTYRPLEAYVAAGLIYFVIC 199 Query: 379 IMIAL 383 +AL Sbjct: 200 GALAL 204 >gi|146284416|ref|YP_001174569.1| amino acid ABC transporter, permease protein [Pseudomonas stutzeri A1501] gi|145572621|gb|ABP81727.1| amino acid ABC transporter, permease protein [Pseudomonas stutzeri A1501] Length = 231 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 42/141 (29%), Positives = 75/141 (53%), Gaps = 1/141 (0%) Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 LG+ I +SP F + IAL A+ E+ R L+A+P+G EA +ALGL R+ Sbjct: 82 LGELFGIANLALSP-FAAGTIALGLCFGAYATEVFRGALLAIPKGHREAGLALGLGKRRI 140 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370 ++LPQ R +P L + ++ L+K+++L +G +++ + + + L+ Sbjct: 141 FLRLILPQMWRLALPGLGNLFMILMKDTALVSVIGLEEIMRRSQIAVTASKEPFTFFLVA 200 Query: 371 MFIYLSLSIMIALFMNRLNAK 391 FIYL L+I+ + M+ L + Sbjct: 201 AFIYLCLTIVAMIGMHFLEKR 221 >gi|241205166|ref|YP_002976262.1| polar amino acid ABC transcriptional regulator inner membrane protein [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240859056|gb|ACS56723.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 220 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 61/204 (29%), Positives = 106/204 (51%), Gaps = 28/204 (13%) Query: 190 FVFSFVLGIVLSL-----FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244 F +FV G++LSL FA R+F LY++ ++ G+P L+A+ + + Sbjct: 34 FALAFVFGLLLSLCQKSSFAAL--RYFAA--------LYVT--IVRGVP---LLAVLFLI 78 Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304 +F P +G V F + L+ AA +AE+ R+GL A+P GQ EAA+A G Sbjct: 79 YFGLPGVG--------IVLDAFGAAIAGLALCFAAQVAELFRAGLKAIPAGQSEAALAAG 130 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364 T ++ L++LPQ R I+ P+ +++LLK+SSLA + +LV G ++ + + Sbjct: 131 FTPAQSFVLIILPQVARVILAPMIITFVSLLKDSSLASLITVNELVLTGRSMATEYFLPL 190 Query: 365 EIILIWMFIYLSLSIMIALFMNRL 388 +I + Y +++ ++ RL Sbjct: 191 QIYIAVGLCYFAIAWPFSVLSRRL 214 >gi|104782330|ref|YP_608828.1| arginine/ornithine ABC transporter permease [Pseudomonas entomophila L48] gi|95111317|emb|CAK16037.1| arginine/ornithine ABC transporter, permease protein [Pseudomonas entomophila L48] Length = 232 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 61/204 (29%), Positives = 99/204 (48%), Gaps = 18/204 (8%) Query: 188 KIFVFSFVLGIVLS--LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH 245 K+ + S G+VL+ L R+SR + ++ T++I G P LV QL Sbjct: 24 KVLLISLACGLVLAIPLALMRVSRSCLLRVPA-----WLYTYVIRGTPMLV------QLF 72 Query: 246 FDKPVLGQFNFIGGSTVSPEFMS----LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301 L QF + S + P S +A + T+A+ AE++ L A PRG++EAA Sbjct: 73 LIYYGLAQFEAVRQSPLWPYLSSATFCTCLAFAINTSAYSAELLAGSLRATPRGELEAAR 132 Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361 A+G++ R +LLP A+R +P +++ L +L+ +SLA V D+ T + Sbjct: 133 AMGMSRLTLYRRILLPSALRRALPQYSNEVLMMLQTTSLASIVTLVDITGAAKTFNARYY 192 Query: 362 QAIEIILIWMFIYLSLS-IMIALF 384 E + IYL L+ I++ LF Sbjct: 193 LPFEAFITAGLIYLVLTFILVRLF 216 >gi|271500408|ref|YP_003333433.1| polar amino acid ABC transporter inner membrane subunit [Dickeya dadantii Ech586] gi|270343963|gb|ACZ76728.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya dadantii Ech586] Length = 224 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 41/115 (35%), Positives = 69/115 (60%), Gaps = 9/115 (7%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +AL+ YTAA+ EI R+GL ++ + Q E A ALG+++ A R V+LPQ ++ ++P LT++ Sbjct: 96 LALTLYTAAYSTEIFRAGLQSMEQSQWEGAKALGMSYPLALRRVILPQVLQRMLPALTNR 155 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI---------ILIWMFIYLS 376 + L K +SLA + +L+ G + + T + +EI +LIW YL+ Sbjct: 156 LIELAKVTSLASMLAVNELMYQGRLLSSDTYRPLEILTVVALFYFVLIWPGSYLA 210 >gi|50842087|ref|YP_055314.1| ABC-type transporter, permease component [Propionibacterium acnes KPA171202] gi|289425866|ref|ZP_06427620.1| conserved hypothetical protein [Propionibacterium acnes SK187] gi|50839689|gb|AAT82356.1| ABC-type transporter, permease component [Propionibacterium acnes KPA171202] gi|289153809|gb|EFD02516.1| conserved hypothetical protein [Propionibacterium acnes SK187] gi|313763968|gb|EFS35332.1| conserved hypothetical protein [Propionibacterium acnes HL013PA1] gi|313791624|gb|EFS39742.1| conserved hypothetical protein [Propionibacterium acnes HL110PA1] gi|313802291|gb|EFS43517.1| conserved hypothetical protein [Propionibacterium acnes HL110PA2] gi|313812555|gb|EFS50269.1| conserved hypothetical protein [Propionibacterium acnes HL025PA1] gi|313814905|gb|EFS52619.1| conserved hypothetical protein [Propionibacterium acnes HL059PA1] gi|313828070|gb|EFS65784.1| conserved hypothetical protein [Propionibacterium acnes HL063PA2] gi|313839057|gb|EFS76771.1| conserved hypothetical protein [Propionibacterium acnes HL086PA1] gi|314914998|gb|EFS78829.1| conserved hypothetical protein [Propionibacterium acnes HL005PA4] gi|314918672|gb|EFS82503.1| conserved hypothetical protein [Propionibacterium acnes HL050PA1] gi|314920477|gb|EFS84308.1| conserved hypothetical protein [Propionibacterium acnes HL050PA3] gi|314932151|gb|EFS95982.1| conserved hypothetical protein [Propionibacterium acnes HL067PA1] gi|314954583|gb|EFS98989.1| conserved hypothetical protein [Propionibacterium acnes HL027PA1] gi|314958618|gb|EFT02720.1| conserved hypothetical protein [Propionibacterium acnes HL002PA1] gi|314962350|gb|EFT06451.1| conserved hypothetical protein [Propionibacterium acnes HL082PA1] gi|314968220|gb|EFT12319.1| conserved hypothetical protein [Propionibacterium acnes HL037PA1] gi|315077436|gb|EFT49496.1| conserved hypothetical protein [Propionibacterium acnes HL053PA2] gi|315080180|gb|EFT52156.1| conserved hypothetical protein [Propionibacterium acnes HL078PA1] gi|315098943|gb|EFT70919.1| conserved hypothetical protein [Propionibacterium acnes HL059PA2] gi|315100816|gb|EFT72792.1| conserved hypothetical protein [Propionibacterium acnes HL046PA1] gi|315107245|gb|EFT79221.1| conserved hypothetical protein [Propionibacterium acnes HL030PA1] gi|315108034|gb|EFT80010.1| conserved hypothetical protein [Propionibacterium acnes HL030PA2] gi|327450117|gb|EGE96771.1| hypothetical protein HMPREF9581_02565 [Propionibacterium acnes HL087PA3] gi|327455156|gb|EGF01811.1| hypothetical protein HMPREF9584_01111 [Propionibacterium acnes HL092PA1] gi|327455329|gb|EGF01984.1| hypothetical protein HMPREF9586_01365 [Propionibacterium acnes HL083PA2] gi|328752782|gb|EGF66398.1| hypothetical protein HMPREF9579_02325 [Propionibacterium acnes HL087PA1] gi|328759296|gb|EGF72912.1| hypothetical protein HMPREF9588_00140 [Propionibacterium acnes HL025PA2] Length = 182 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 46/127 (36%), Positives = 67/127 (52%), Gaps = 1/127 (0%) Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312 QF + V + I L A++AEI RSGL +V GQ EAA ALG+ R Sbjct: 7 QFASVETEKVVTALAAAIIGLGLNEGAYLAEITRSGLESVDVGQTEAAKALGMKPSLIMR 66 Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA-DLVSVGGTIINQTGQAIEIILIWM 371 ++PQAMR IIPP ++ + +LK +SL +A+ F DL I N T I ++++ Sbjct: 67 RAIIPQAMRVIIPPPGNETIGMLKTTSLVLALPFTLDLQYATSAIANCTYAPIPLLVVAA 126 Query: 372 FIYLSLS 378 YL ++ Sbjct: 127 CWYLVMT 133 >gi|71734665|ref|YP_275673.1| arginine/ornithine ABC transporter permease [Pseudomonas syringae pv. phaseolicola 1448A] gi|257482806|ref|ZP_05636847.1| arginine/ornithine ABC transporter, permease protein [Pseudomonas syringae pv. tabaci ATCC 11528] gi|289650401|ref|ZP_06481744.1| arginine/ornithine ABC transporter, permease protein [Pseudomonas syringae pv. aesculi str. 2250] gi|298488144|ref|ZP_07006181.1| Arginine/ornithine ABC transporter, permease protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|71555218|gb|AAZ34429.1| arginine/ornithine ABC transporter, permease protein [Pseudomonas syringae pv. phaseolicola 1448A] gi|298157423|gb|EFH98506.1| Arginine/ornithine ABC transporter, permease protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|330988693|gb|EGH86796.1| arginine/ornithine ABC transporter permease [Pseudomonas syringae pv. lachrymans str. M301315] gi|331012329|gb|EGH92385.1| arginine/ornithine ABC transporter permease [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 232 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 52/167 (31%), Positives = 86/167 (51%), Gaps = 11/167 (6%) Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL----YIALSCYTA 278 ++ T++I G P LV + L Y L QF+ + S + P S +A + T+ Sbjct: 56 WLYTYVIRGTPMLVQLFLIYY------GLAQFDAVRESFLWPWLSSATFCACLAFTINTS 109 Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338 A+ AEI+ L A P G++EAA A+G++ K R +LLP A+R +P +++ + +L+ + Sbjct: 110 AYTAEIIAGSLKATPAGEIEAARAMGMSKAKMYRRILLPSALRRALPQYSNEVIMMLQTT 169 Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS-IMIALF 384 SLA V D+ T+ Q E + YL L+ I++ LF Sbjct: 170 SLASIVTLIDITGAARTVNAQFYLPFEAYVTAGVFYLCLTFILVRLF 216 >gi|107022692|ref|YP_621019.1| amino acid ABC transporter permease [Burkholderia cenocepacia AU 1054] gi|116689641|ref|YP_835264.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia cenocepacia HI2424] gi|105892881|gb|ABF76046.1| amino acid ABC transporter membrane protein 2, PAAT family [Burkholderia cenocepacia AU 1054] gi|116647730|gb|ABK08371.1| amino acid ABC transporter membrane protein 2, PAAT family [Burkholderia cenocepacia HI2424] Length = 241 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 56/165 (33%), Positives = 87/165 (52%), Gaps = 17/165 (10%) Query: 195 VLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQF 254 VLG+ L + A L+R + L L +I F +P L+LI Y F PVL Sbjct: 42 VLGVALGI-AMALAR----GPARVLLLAFIGFFR--AIPVLMLIFWTY---FLMPVLLHM 91 Query: 255 NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLV 314 + G +TV AL+ A++A V +G++A GQ +A ++LGLT + R V Sbjct: 92 DVPGLATV-------VCALALIGGAYLAHAVHAGIVAAGDGQWQAGLSLGLTRWQTVRYV 144 Query: 315 LLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359 LLPQA+R + P +Q++ L+K++SLA VG +L + + N+ Sbjct: 145 LLPQAIRIMTPSFVNQWVALVKDTSLAYIVGVPELSFIATQVNNR 189 >gi|328947350|ref|YP_004364687.1| polar amino acid ABC transporter, inner membrane subunit [Treponema succinifaciens DSM 2489] gi|328447674|gb|AEB13390.1| polar amino acid ABC transporter, inner membrane subunit [Treponema succinifaciens DSM 2489] Length = 224 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 34/103 (33%), Positives = 62/103 (60%), Gaps = 3/103 (2%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 F + +A+ AA+ AEI R G+ ++P GQ EAA LG T + +++PQ ++ II Sbjct: 94 RFTAAIVAMVINYAAYFAEIYRGGIQSIPFGQYEAAKVLGFTKNQTFFRIIIPQVVKRII 153 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367 PP+ ++ + L+K+++L +G A+L V T Q+G+ + ++ Sbjct: 154 PPMGNEVITLVKDTALVQVLGVAELFHVAQT---QSGRLVSVM 193 >gi|261820367|ref|YP_003258473.1| polar amino acid ABC transporter inner membrane protein [Pectobacterium wasabiae WPP163] gi|261604380|gb|ACX86866.1| polar amino acid ABC transporter, inner membrane subunit [Pectobacterium wasabiae WPP163] Length = 237 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 44/142 (30%), Positives = 79/142 (55%), Gaps = 14/142 (9%) Query: 257 IGGSTVS-PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315 I G+ S P+++ +AL+ + + +EIVR GL ++P Q EAA AL + T ++ Sbjct: 93 IAGTWFSFPDWVKAVVALAIPVSGYTSEIVRGGLKSIPTTQWEAAAALAFGTVRTTLTII 152 Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ--------AIEII 367 LPQA+R ++PP + Y +++ +SLA VG +++++ TI+ + +I +I Sbjct: 153 LPQAIRQMVPPTMNLYCSVVMATSLANVVGVQEVMTITQTILTTETRPGLILPAYSITLI 212 Query: 368 LIWMFIYLSLSIMIALFMNRLN 389 L + F++ I+LF RL Sbjct: 213 LFFAFVF-----PISLFSRRLE 229 >gi|225378641|ref|ZP_03755862.1| hypothetical protein ROSEINA2194_04309 [Roseburia inulinivorans DSM 16841] gi|225209478|gb|EEG91832.1| hypothetical protein ROSEINA2194_04309 [Roseburia inulinivorans DSM 16841] Length = 247 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 59/213 (27%), Positives = 109/213 (51%), Gaps = 22/213 (10%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 + + ++G++L+L T+ + G +YIS LI G P +V + + Y F P+ Sbjct: 33 IIALIIGMLLALIKTKNIPLLKQIAG-----VYIS--LIRGTPVIVQLYIAY---FGIPM 82 Query: 251 LGQFNFIGG-----STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305 + ++ + S+ + F+ IALS +A+IAEI R L +V GQ+EAA A+G+ Sbjct: 83 ITKYIYQQNGWNYQSSTTSGFVYAIIALSINESAYIAEIFRGALASVNVGQIEAASAIGM 142 Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365 T+ + ++ P+ + +P L + ++ L+K +SLA ++ + G I +T + E Sbjct: 143 TYFQTFCRIIFPEMLSVALPGLGNSFIGLIKGTSLAFVCAVVEMTAQGKIIGGRTYRYFE 202 Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 +Y+SL+I+ + + I L EKK Sbjct: 203 -------VYVSLAIIYWVITFVIEQGIRLIEKK 228 >gi|213614416|ref|ZP_03371242.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] Length = 178 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 54/158 (34%), Positives = 88/158 (55%), Gaps = 18/158 (11%) Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251 F +LG VL+L R+S + + L YIS F G P LIA + +++ P Sbjct: 32 FGLLLGFVLALM--RMSPLWPVRW---LARFYISIFR--GTP---LIAQLFMIYYGLP-- 79 Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311 QF G + P + I LS TAA+ +E +R+ + A+ +GQ EAA ++G+T + Sbjct: 80 -QF----GIELDP-IPAAMIGLSLNTAAYTSETLRAAISAIDKGQWEAAASIGMTPWQTL 133 Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349 R +LPQA R +PPL++ +++L+K++SLA + +L Sbjct: 134 RRAILPQAARVALPPLSNSFISLVKDTSLAATIQVPEL 171 Score = 37.4 bits (85), Expect = 4.7, Method: Compositional matrix adjust. Identities = 29/103 (28%), Positives = 48/103 (46%), Gaps = 8/103 (7%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G V T L+ GM ++G ++ R+S V W+ R Y+ +FR P + +F + Sbjct: 15 LLKGAVFTLQLSIGGMFFGLLLGFVLALMRMSPLWPVRWLARFYISIFRGTPLIAQLFMI 74 Query: 149 YKSV----LSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187 Y + + + PIP I G+ LN + TL +A Sbjct: 75 YYGLPQFGIELDPIPAAMI----GLSLNTAAYTSETLRAAISA 113 >gi|306825910|ref|ZP_07459249.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sp. oral taxon 071 str. 73H25AP] gi|304432271|gb|EFM35248.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sp. oral taxon 071 str. 73H25AP] Length = 230 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 28/82 (34%), Positives = 55/82 (67%) Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 AA +AE+ ++ A+P+GQ EA +++GLT + ++ PQA + +P +T+ LNL+++ Sbjct: 109 AAIVAEVFKAAYQAIPKGQTEAGLSIGLTPSQTFWRIIFPQAFQVALPNITTAILNLMRD 168 Query: 338 SSLAVAVGFADLVSVGGTIINQ 359 ++LA +GF D++ G +I++ Sbjct: 169 AALAYTIGFVDVMGAGNLLISR 190 >gi|327482801|gb|AEA86111.1| amino acid ABC transporter, permease protein [Pseudomonas stutzeri DSM 4166] Length = 231 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 42/141 (29%), Positives = 75/141 (53%), Gaps = 1/141 (0%) Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 LG+ I +SP F + IAL A+ E+ R L+A+P+G EA +ALGL R+ Sbjct: 82 LGELFGIANLALSP-FAAGTIALGLCFGAYATEVFRGALLAIPKGHREAGLALGLGKRRI 140 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370 ++LPQ R +P L + ++ L+K+++L +G +++ + + + L+ Sbjct: 141 FLRLILPQMWRLALPGLGNLFMILMKDTALVSVIGLEEIMRRSQIAVTASKEPFTFFLVA 200 Query: 371 MFIYLSLSIMIALFMNRLNAK 391 FIYL L+I+ + M+ L + Sbjct: 201 AFIYLCLTIVAMIGMHFLEKR 221 >gi|306828836|ref|ZP_07462028.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus mitis ATCC 6249] gi|304429014|gb|EFM32102.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus mitis ATCC 6249] Length = 230 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 28/82 (34%), Positives = 55/82 (67%) Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 AA +AE+ ++ A+P+GQ EA +++GLT + ++ PQA + +P +T+ LNL+++ Sbjct: 109 AAIVAEVFKAAYQAIPKGQTEAGLSIGLTPSQTFWRIIFPQAFQVALPNITTAILNLMRD 168 Query: 338 SSLAVAVGFADLVSVGGTIINQ 359 ++LA +GF D++ G +I++ Sbjct: 169 AALAYTIGFVDVMGAGNLLISR 190 >gi|303234492|ref|ZP_07321129.1| ABC transporter, permease protein [Finegoldia magna BVS033A4] gi|302494326|gb|EFL54095.1| ABC transporter, permease protein [Finegoldia magna BVS033A4] Length = 526 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 39/120 (32%), Positives = 72/120 (60%), Gaps = 1/120 (0%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G ++P +L+I +S T A+++E+VR G+ +V GQMEA ALG+TH ++ V+LPQ Sbjct: 376 GIDMAPISAALFI-VSVNTGAYLSEVVRGGINSVDVGQMEACKALGMTHSQSMINVILPQ 434 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378 A+++I+P + ++++ +K++S+ + +L V +I T E + IY L+ Sbjct: 435 AIKNILPSIGNEFVINIKDTSVLNVISVTELFFVSKSIAGSTYNIFETYAVTCVIYFVLT 494 >gi|225352765|ref|ZP_03743788.1| hypothetical protein BIFPSEUDO_04395 [Bifidobacterium pseudocatenulatum DSM 20438] gi|225156372|gb|EEG69941.1| hypothetical protein BIFPSEUDO_04395 [Bifidobacterium pseudocatenulatum DSM 20438] Length = 225 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 66/215 (30%), Positives = 102/215 (47%), Gaps = 27/215 (12%) Query: 191 VFSFVLGIVLSLF------ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244 +FS +LG++L + + R+ + + K LPL I F++ G Sbjct: 29 LFSTILGVILVMMRISPVASLRMVSGAYVELFKNLPLTIIMVFMVLG------------- 75 Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYI-ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 Q T + F L + LS YTAAF+ E +RSG+ VP GQ EA AL Sbjct: 76 -----AYAQLKLSFSDTFATNFFWLAVTGLSLYTAAFVCESLRSGINTVPLGQAEACRAL 130 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS--VGGTIINQTG 361 GL ++ ++LPQA R + PL + + LLKNS++A A A S + I ++ Sbjct: 131 GLNFMQSATQIILPQAFRGSVAPLGNTLIALLKNSTVAAAASVATETSSLMSEMIEYRSD 190 Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 + I LI+ F Y+ L I I + L+ K+A++ Sbjct: 191 VIVPIFLIFAFGYVILIIPIGMLTTYLSNKLAVRR 225 >gi|190151021|ref|YP_001969546.1| aino acid ABC transporter permease [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|307264380|ref|ZP_07545967.1| Binding-protein-dependent transport system inner membrane component family protein [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|189916152|gb|ACE62404.1| putative ABC transporter, permease protein, amino acid [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|306870267|gb|EFN02024.1| Binding-protein-dependent transport system inner membrane component family protein [Actinobacillus pleuropneumoniae serovar 13 str. N273] Length = 219 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 44/121 (36%), Positives = 67/121 (55%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IAL A+++AE +R+GL+AVP+GQ EAA A+GL + R V+ PQA IP + + Sbjct: 91 IALVFLGASYMAEALRAGLLAVPKGQTEAAKAIGLNRFQVFRYVIFPQAWAVSIPAIGAN 150 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 L L+K +S+ AV A+L+ V II + E + + YL + + I+L Sbjct: 151 VLFLIKETSVISAVAVAELMFVTKDIIGMDYKTNEALFLLFASYLVILLPISLLARHFEN 210 Query: 391 K 391 K Sbjct: 211 K 211 >gi|116254852|ref|YP_770688.1| putative permease component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] gi|115259500|emb|CAK10638.1| putative permease component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] Length = 229 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 39/119 (32%), Positives = 66/119 (55%) Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 AA+ AE++R L+AVP+G++EA A GL+ R + LP+A+R +P + + + LK Sbjct: 111 AAYEAEVLRGALLAVPKGELEAGRAFGLSPWMLIRRIWLPRAIRIALPTIAGEIVMQLKA 170 Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 + LA V DL +V + T E +L+ YL+L+ +IA L A++ ++ Sbjct: 171 TPLAFTVTVMDLYAVANKVRQDTLLVYEPLLVVTLFYLALTAVIARVFRSLEAQVPVRR 229 >gi|319782289|ref|YP_004141765.1| binding-protein-dependent transport systems inner membrane component [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317168177|gb|ADV11715.1| binding-protein-dependent transport systems inner membrane component [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 359 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 44/125 (35%), Positives = 70/125 (56%), Gaps = 12/125 (9%) Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 +A+ AEIVR G+ V GQ EAA+ALG+ + + +LLPQAMR+ +P +Q++ K Sbjct: 237 SAYQAEIVRGGMQGVATGQEEAAMALGMRYWQRISRILLPQAMRNAMPATINQFVISFKE 296 Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA----LFMNRLNAKIA 393 +SL V VGF ++++ G TG+ W F Y+ + IA +F+ L+ A Sbjct: 297 TSLVVIVGFFEILASGNAAYG-TGE-------WRFAYVEVYAFIAFIYFIFVFSLSRYGA 348 Query: 394 LKEKK 398 E++ Sbjct: 349 FLERR 353 >gi|315930623|gb|EFV09650.1| L-cystine transport system permease protein TcyB [Campylobacter jejuni subsp. jejuni 305] Length = 141 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 40/124 (32%), Positives = 66/124 (53%), Gaps = 7/124 (5%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I S YT++ +AEI+R GL ++P+GQ EAA + G ++LPQ R IIP L SQ Sbjct: 13 IGFSLYTSSVMAEIIRGGLNSIPKGQFEAAYSQGFGKFFTLFYIILPQTFRKIIPALLSQ 72 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL-------IWMFIYLSLSIMIAL 383 + +K+++ +G A+L TI+ + EI+ I+ I SLS+++ Sbjct: 73 IVTTVKDTAYLAGLGIAELTYNSKTILAKLTSFEEILAMIGVVAGIYFIICFSLSMLVRY 132 Query: 384 FMNR 387 + + Sbjct: 133 YAKK 136 >gi|152977983|ref|YP_001343612.1| polar amino acid ABC transporter, inner membrane subunit [Actinobacillus succinogenes 130Z] gi|150839706|gb|ABR73677.1| polar amino acid ABC transporter, inner membrane subunit [Actinobacillus succinogenes 130Z] Length = 238 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 54/206 (26%), Positives = 103/206 (50%), Gaps = 19/206 (9%) Query: 193 SFVLGIVLSLFA-----TRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247 SF++G+++++ T ++ H T AL +YIS +I G P LV I++ + + Sbjct: 42 SFIIGMIIAVGVALIRITPVTGVLHRIT-LALVKIYIS--IIRGTPMLVQISVVF---YG 95 Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307 P +G F + P + I S A+ +E VR+ + +VP+GQ EA +G+ + Sbjct: 96 LPAIGIF-------IDP-IPAAIIGFSLNIGAYASETVRAAISSVPKGQWEAGYTIGMNY 147 Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367 + R ++ PQA R +PPL++ ++ L K++SLA V ++ V + N + + + Sbjct: 148 MQTFRRIIAPQAFRVAVPPLSNTFIGLFKDTSLASVVTVTEMFRVAQQMANMSYDFLPVY 207 Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIA 393 + +Y ++ RL ++A Sbjct: 208 IEAGLVYWCFCWILFFIQARLEKRMA 233 >gi|126437886|ref|YP_001073577.1| polar amino acid ABC transporter, inner membrane subunit [Mycobacterium sp. JLS] gi|126237686|gb|ABO01087.1| amino acid ABC transporter substrate-binding protein, PAAT family / amino acid ABC transporter membrane protein, PAAT family [Mycobacterium sp. JLS] Length = 489 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 51/151 (33%), Positives = 85/151 (56%), Gaps = 14/151 (9%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 V SF +G+V++L L+R + YIS +I G P LV + + + F P Sbjct: 296 VISFAIGLVIAL-GVALARLSPNVVLTNVARFYIS--IIRGTPLLVQL---FIVFFALP- 348 Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 +F G + P F + IA S + AEI+RS ++++P+GQ EAA +G+ + + Sbjct: 349 --EF----GIRIDP-FPAAVIAFSLNVGGYAAEIIRSAILSIPKGQWEAAETIGMNYPTS 401 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341 R ++LPQA R +PPL++ ++L+K++SLA Sbjct: 402 LRRIVLPQAARVAVPPLSNTLISLVKDTSLA 432 >gi|325062906|gb|ADY66596.1| ABC transporter, nucleotide binding/ATPase protein [Agrobacterium sp. H13-3] Length = 601 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 41/133 (30%), Positives = 73/133 (54%), Gaps = 3/133 (2%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + + L+ AAF +EIVR G+++V +GQ+EAA ALGL R+ ++LPQAMRSI+P Sbjct: 167 FAAAVLGLTLNQAAFASEIVRGGILSVDQGQLEAAAALGLPRRRQASRIVLPQAMRSILP 226 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL---IWMFIYLSLSIMIA 382 + + L K +S + +L I + + I +++ +W + L+ ++ Sbjct: 227 TAFNDIIGLAKGTSQVYILALPELFYTIQIIYRRNLEVIPLLMVATVWYLVILTALSIVQ 286 Query: 383 LFMNRLNAKIALK 395 + R ++ AL+ Sbjct: 287 HHIERHFSRGALR 299 >gi|296156736|ref|ZP_06839574.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. Ch1-1] gi|295893335|gb|EFG73115.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. Ch1-1] Length = 226 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 55/158 (34%), Positives = 83/158 (52%), Gaps = 12/158 (7%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 +AL +L++S LI G P L+ + + Y + P L N ++SP + AL+C Sbjct: 55 RALVVLWVS--LIRGTPALIHMLIAY---YMVPAL--LNI----SISPVTAGIA-ALACN 102 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 T+A+I EI+R L + GQ A ALG+ + R VLLPQ + IPPLTS++ LLK Sbjct: 103 TSAYIVEILRGSLGTISWGQRAAGYALGMRTAQVWRHVLLPQMIYRAIPPLTSEFTLLLK 162 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374 SSL + +L +V QT +++ I +Y Sbjct: 163 ASSLMSIIAVPELATVARNATLQTDLPLQVFTITAAVY 200 >gi|293364295|ref|ZP_06611021.1| amino acid ABC superfamily ATP binding cassette transporter, permease protein [Streptococcus oralis ATCC 35037] gi|307702739|ref|ZP_07639691.1| nopaline transport system permease protein nocM [Streptococcus oralis ATCC 35037] gi|315612440|ref|ZP_07887353.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis ATCC 49296] gi|322374986|ref|ZP_08049500.1| amino acid ABC transporter, permease protein [Streptococcus sp. C300] gi|291317141|gb|EFE57568.1| amino acid ABC superfamily ATP binding cassette transporter, permease protein [Streptococcus oralis ATCC 35037] gi|307623855|gb|EFO02840.1| nopaline transport system permease protein nocM [Streptococcus oralis ATCC 35037] gi|315315421|gb|EFU63460.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis ATCC 49296] gi|321280486|gb|EFX57525.1| amino acid ABC transporter, permease protein [Streptococcus sp. C300] Length = 230 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 28/82 (34%), Positives = 55/82 (67%) Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 AA +AE+ ++ A+P+GQ EA +++GLT + ++ PQA + +P +T+ LNL+++ Sbjct: 109 AAIVAEVFKAAYQAIPKGQTEAGLSIGLTPSQTFWRIIFPQAFQVALPNITTAILNLMRD 168 Query: 338 SSLAVAVGFADLVSVGGTIINQ 359 ++LA +GF D++ G +I++ Sbjct: 169 AALAYTIGFVDVMGAGNLLISR 190 >gi|259046945|ref|ZP_05737346.1| amino acid ABC superfamily ATP binding cassette transporter, permease protein [Granulicatella adiacens ATCC 49175] gi|259036388|gb|EEW37643.1| amino acid ABC superfamily ATP binding cassette transporter, permease protein [Granulicatella adiacens ATCC 49175] Length = 218 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 56/184 (30%), Positives = 89/184 (48%), Gaps = 21/184 (11%) Query: 228 LIFGLPTLVLIALKYQLHFD---------------KPVLGQFNFIGG--STVSPEFMSLY 270 LIF +P +LIA QL + P+L Q FI +V L Sbjct: 31 LIFSIPLGILIAFAMQLKWKPLNWLIHIYIWVMRGTPLLLQLIFIYYVLPSVGIRLDRLP 90 Query: 271 IALSCYT---AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327 AL +T AA+ AEI R G+ +P+GQ EAA L T R ++LPQ + ++P + Sbjct: 91 AALIAFTLNYAAYFAEIFRGGIDTIPKGQYEAAKVLKFTPGATIRYIVLPQVTKIVLPSV 150 Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387 ++ ++L+K++SL A+G +DL+ T N+ + + L IYL + ++ L R Sbjct: 151 FNEIMSLVKDTSLVYALGISDLILASRTAANRDASLVPMFLAGA-IYLIVIGVVTLVAKR 209 Query: 388 LNAK 391 + K Sbjct: 210 IEKK 213 >gi|108801905|ref|YP_642102.1| amino acid ABC transporter permease [Mycobacterium sp. MCS] gi|119871057|ref|YP_941009.1| polar amino acid ABC transporter, inner membrane subunit [Mycobacterium sp. KMS] gi|108772324|gb|ABG11046.1| amino acid ABC transporter membrane protein, PAAT family / amino acid ABC transporter substrate-binding protein, PAAT family [Mycobacterium sp. MCS] gi|119697146|gb|ABL94219.1| amino acid ABC transporter substrate-binding protein, PAAT family / amino acid ABC transporter membrane protein, PAAT family [Mycobacterium sp. KMS] Length = 489 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 51/151 (33%), Positives = 85/151 (56%), Gaps = 14/151 (9%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 V SF +G+V++L L+R + YIS +I G P LV + + + F P Sbjct: 296 VISFAIGLVIAL-GVALARLSPNVVLTNVARFYIS--IIRGTPLLVQL---FIVFFALP- 348 Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 +F G + P F + IA S + AEI+RS ++++P+GQ EAA +G+ + + Sbjct: 349 --EF----GIRIDP-FPAAVIAFSLNVGGYAAEIIRSAILSIPKGQWEAAETIGMNYPTS 401 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341 R ++LPQA R +PPL++ ++L+K++SLA Sbjct: 402 LRRIVLPQAARVAVPPLSNTLISLVKDTSLA 432 >gi|330468470|ref|YP_004406213.1| polar amino acid ABC transporter inner membrane subunit [Verrucosispora maris AB-18-032] gi|328811441|gb|AEB45613.1| polar amino acid abc transporter, inner membrane subunit [Verrucosispora maris AB-18-032] Length = 260 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 43/126 (34%), Positives = 74/126 (58%), Gaps = 5/126 (3%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +ALS +A+I EI RSG+ +V Q+EAA ALG + +A R V++PQ +R I+P +Q Sbjct: 106 LALSLIASAYIGEIFRSGIQSVEATQLEAARALGFSWGEAMRRVIIPQGIRRILPAWVNQ 165 Query: 331 YLNLLKNSSLAVAVGF----ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386 + L+K+SSL +G +L +G TG ++L +F YL+L++ + +N Sbjct: 166 LIALIKDSSLVYFLGLLASQRELFRIGQDYAANTGNQSALLLAGLF-YLALTVPLTHVVN 224 Query: 387 RLNAKI 392 ++ ++ Sbjct: 225 WIDRRL 230 Score = 36.6 bits (83), Expect = 7.8, Method: Compositional matrix adjust. Identities = 18/60 (30%), Positives = 30/60 (50%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 I VG NT LA + + + +G ++ +S + + W RVY +VFR +P I + Sbjct: 25 ITVGLPNTLILAVTAALLGSALGIVLAVAGISRTRWLRWPARVYTDVFRGLPAAATILLI 84 >gi|260461009|ref|ZP_05809258.1| polar amino acid ABC transporter, inner membrane subunit [Mesorhizobium opportunistum WSM2075] gi|259033043|gb|EEW34305.1| polar amino acid ABC transporter, inner membrane subunit [Mesorhizobium opportunistum WSM2075] Length = 230 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 38/123 (30%), Positives = 63/123 (51%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + S AF EI R + A+P+GQ EAA ALG + RLV++PQA+R ++PP Sbjct: 92 VTFSLNGGAFFGEIFRGAIEAIPKGQWEAATALGFRFVRTLRLVIIPQAVRLMLPPTVGF 151 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 + ++K +S+A +G +L + T Q + + IY +L ++L+ L Sbjct: 152 MVQIVKTTSIASLIGLTELARAATQVNTVTFQPVMVFGTVSIIYFALCWPLSLYAGYLER 211 Query: 391 KIA 393 + A Sbjct: 212 RFA 214 >gi|165977126|ref|YP_001652719.1| putative ABC transporter, permease protein [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|165877227|gb|ABY70275.1| putative ABC transporter, permease protein [Actinobacillus pleuropneumoniae serovar 3 str. JL03] Length = 219 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 44/121 (36%), Positives = 67/121 (55%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IAL A+++AE +R+GL+AVP+GQ EAA A+GL + R V+ PQA IP + + Sbjct: 91 IALVFLGASYMAEALRAGLLAVPKGQTEAAKAIGLNRFQVFRYVIFPQAWAVSIPAIGAN 150 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 L L+K +S+ AV A+L+ V II + E + + YL + + I+L Sbjct: 151 VLFLIKETSVISAVAVAELMFVTKDIIGMDYKTNEALFLLFASYLVILLPISLLARHFEN 210 Query: 391 K 391 K Sbjct: 211 K 211 >gi|241895708|ref|ZP_04783004.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Weissella paramesenteroides ATCC 33313] gi|241871075|gb|EER74826.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Weissella paramesenteroides ATCC 33313] Length = 214 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 31/90 (34%), Positives = 53/90 (58%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P F + + AA+ AEI R G+ ++P GQ + A LGL+ + R ++LPQ + + Sbjct: 83 PRFEAAVVTFILNYAAYFAEIFRGGIQSIPDGQYDGAKVLGLSKFQTMRKIVLPQVFKIV 142 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353 +P + ++ +NL+K+SSL +G DL+ G Sbjct: 143 MPSMGNEVVNLVKDSSLVYVIGLGDLMRAG 172 >gi|317403050|gb|EFV83587.1| glutamine transport system permease [Achromobacter xylosoxidans C54] Length = 218 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 52/165 (31%), Positives = 87/165 (52%), Gaps = 10/165 (6%) Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287 +I G P +V + Y F P+L V E+ ++ + L + A+I+EIVR Sbjct: 61 VIRGTPIVVQVMFIY---FALPLLANIR------VDAEWAAI-VTLIINSGAYISEIVRG 110 Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347 L++V +G EA A+GL K ++ P A R +IPPL +Q + LK+SSL + +G A Sbjct: 111 SLLSVHKGLKEAGQAMGLPFHKILFHIIGPVAFRRMIPPLGNQCIISLKDSSLFIVIGVA 170 Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 +L G I+ +A+EI +YL L+ +AL ++ + ++ Sbjct: 171 ELTRQGQEIMASNFRAVEIWSAIAIVYLILTGTMALILHLVEKRM 215 >gi|310766723|gb|ADP11673.1| Putative amino acid ABC transporter, permease protein [Erwinia sp. Ejp617] Length = 218 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 38/108 (35%), Positives = 63/108 (58%), Gaps = 1/108 (0%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G +SP + + +AL+CYT+AF+ +I + A+P+GQ EA LGL+ + V+LPQ Sbjct: 80 GIDLSP-WTAAALALTCYTSAFLVDIWYGSIRALPKGQWEACRCLGLSTGQTLFRVVLPQ 138 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 A+R I P + ++K ++LA +GF +L G + N T Q ++ Sbjct: 139 ALRIAIAPTVGFAVQVVKGTALASIIGFIELTKAGTILNNVTYQPFKV 186 >gi|56697508|ref|YP_167876.1| polar amino acid ABC transporter permease [Ruegeria pomeroyi DSS-3] gi|56679245|gb|AAV95911.1| polar amino acid uptake family ABC transporter, permease protein [Ruegeria pomeroyi DSS-3] Length = 267 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 44/125 (35%), Positives = 70/125 (56%), Gaps = 1/125 (0%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I+LS + AF EI RSG+ AVP +EA+ ALG+T + V+LP A R +P L + Sbjct: 138 ISLSFFAGAFNVEIFRSGIEAVPDATIEASEALGMTRLQTYSHVILPLAFRVSLPALNNN 197 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF-IYLSLSIMIALFMNRLN 389 +NL+K ++ A A+ +L+ TI N A ++ +F +Y+ L ++ L MNR Sbjct: 198 LVNLIKTTTQAFAIAVPELLYQAVTIWNDYPSAQYPAMLLLFVVYIGLVGIMVLGMNRWE 257 Query: 390 AKIAL 394 +A+ Sbjct: 258 RHLAI 262 >gi|311107900|ref|YP_003980753.1| amino ABC transporter permease, 3-TM region, His/Glu/Gln/Arg/opine family domain-containing protein 15 [Achromobacter xylosoxidans A8] gi|310762589|gb|ADP18038.1| amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family domain protein 15 [Achromobacter xylosoxidans A8] Length = 230 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 42/121 (34%), Positives = 72/121 (59%), Gaps = 8/121 (6%) Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292 P LV I Y +++ P+L + G+ E + +A++ + AA+++EI+R G+ +V Sbjct: 71 PLLVQI---YLVYYAVPML-----VPGAKGWSEMLLGIMAMTLHHAAYMSEIIRVGIESV 122 Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352 PRGQ+E A A G+ + + R V+LPQA + +PPL Q L+K++SL + +LV+ Sbjct: 123 PRGQIEGAKACGMNYGQRLRYVVLPQAFANTLPPLLGQTAVLIKDTSLLSLITVFELVAA 182 Query: 353 G 353 G Sbjct: 183 G 183 >gi|290961303|ref|YP_003492485.1| binding-protein-dependent ABC transporter transmembrane protein [Streptomyces scabiei 87.22] gi|260650829|emb|CBG73946.1| putative binding-protein-dependent transport system transmembrane subunit [Streptomyces scabiei 87.22] Length = 305 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 52/182 (28%), Positives = 96/182 (52%), Gaps = 22/182 (12%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 + LPL+ ++ G+P AL+ Q PVL +GG+ AL+ Sbjct: 142 RGLPLIINLMIVVLGVP-----ALRLQGVTVDPVL-----LGGT-----------ALTLT 180 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 +A++AE+ R+G+ +V Q AA +LGLT+R+A R V+LPQA+R +PPL + ++L K Sbjct: 181 YSAYVAEVFRAGIESVHPSQRAAARSLGLTNRQALRHVVLPQAVRRQVPPLLNDLVSLQK 240 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 ++ L G D V I+ ++ I+ + ++++L+I + F + + A++ + Sbjct: 241 DTGLVSIGGAIDAVRAADIIVGRSLNYTPYIVAGL-VFVALTIPMTRFTDWVTARMDRQR 299 Query: 397 KK 398 + Sbjct: 300 AQ 301 >gi|167760761|ref|ZP_02432888.1| hypothetical protein CLOSCI_03146 [Clostridium scindens ATCC 35704] gi|167661648|gb|EDS05778.1| hypothetical protein CLOSCI_03146 [Clostridium scindens ATCC 35704] Length = 221 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 49/187 (26%), Positives = 89/187 (47%), Gaps = 25/187 (13%) Query: 213 EKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQF-----NFIGGSTVSPEFM 267 E KALP+ T + F L ++ I + +F P+L + +F G+ + P+ Sbjct: 11 EAMMKALPVTLSLTGISFTLALVLAILIAIVEYFKVPILDRIFSLYVSFFRGTPLIPQLF 70 Query: 268 SLY--------------------IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307 LY + L+ +AA++ E+VR L++VP GQ EAA+A G++ Sbjct: 71 LLYFGIPTFVPALRNVSAYSVCVVGLTLNSAAYMKEVVRGSLLSVPEGQKEAALAHGMSS 130 Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367 + ++LPQA R IP L + ++++K +S+A +G ++ + T E Sbjct: 131 MQTMFRIVLPQAARVAIPSLFNNLVDIVKGTSMAFTIGVIEITAAANLRAAVTFNYFEAY 190 Query: 368 LIWMFIY 374 ++ M +Y Sbjct: 191 MVLMLLY 197 >gi|298485705|ref|ZP_07003784.1| Amino acid ABC transporter, permease protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298159731|gb|EFI00773.1| Amino acid ABC transporter, permease protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 198 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 46/119 (38%), Positives = 74/119 (62%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IALS A+++EI R+G+I V GQ EAA+AL L + V LPQAMR+IIPP T+Q Sbjct: 69 IALSLNYGAYLSEIFRAGIIGVAAGQREAALALALRPAQIFWRVTLPQAMRTIIPPTTNQ 128 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 ++++LK+SSL +G +++ + + + + IE++ +Y +SI + L +RL Sbjct: 129 FISMLKDSSLISVMGVWEVMFLAQSYGRSSYRYIEMLTTAAVLYWIMSIGLELLQSRLE 187 >gi|70731861|ref|YP_261603.1| arginine/ornithine transport system permease aotM [Pseudomonas fluorescens Pf-5] gi|68346160|gb|AAY93766.1| arginine/ornithine transport system permease protein aotM [Pseudomonas fluorescens Pf-5] Length = 232 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 52/167 (31%), Positives = 85/167 (50%), Gaps = 11/167 (6%) Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL----YIALSCYTA 278 ++ T++I G P LV + L Y L QF + S + P S +A + T+ Sbjct: 56 WLYTYVIRGTPMLVQLFLIYY------GLAQFEAVRESFLWPWLSSATFCACLAFAINTS 109 Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338 A+ AEI+ L A P G++EAA A+G++ K R +LLP A+R +P +++ + +L+ + Sbjct: 110 AYTAEIIAGSLKATPNGEIEAAKAMGMSRYKMYRRILLPSALRRALPQYSNEVIMMLQTT 169 Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS-IMIALF 384 SLA V D+ T+ Q E + YL L+ I++ LF Sbjct: 170 SLASIVTLIDITGAARTVNAQYYLPFEAYITAGVFYLCLTFILVRLF 216 >gi|67459548|ref|YP_247172.1| amino acid ABC transporter permease [Rickettsia felis URRWXCal2] gi|75536048|sp|Q4UKC4|GLNP_RICFE RecName: Full=Putative glutamine transport system permease protein glnP gi|67005081|gb|AAY62007.1| Amino acid ABC transporter permease protein [Rickettsia felis URRWXCal2] Length = 218 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 46/166 (27%), Positives = 88/166 (53%), Gaps = 29/166 (17%) Query: 191 VFSFVLGIVLSLF------ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244 +F V+G++L++ A RL +F+ + PLL + + F P + I +K+ + Sbjct: 31 IFGLVIGMLLAICKVNKNRALRLFANFYTSIFRGTPLLIQLSIIYFASPYI--IGVKFSV 88 Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304 FM+ I+ S + A+++E++R+G+ AV +GQ EAA+AL Sbjct: 89 ---------------------FMAGAISFSLNSGAYVSEVIRAGINAVDKGQFEAAVALA 127 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 + + ++LPQA+++I P L ++ +NL+K S++ +G DL+ Sbjct: 128 IPKFLIMKDIILPQAVKNIFPSLVNELVNLVKESAIISMLGEMDLM 173 >gi|319408774|emb|CBI82431.1| glutamate/aspartate transport system permease protein [Bartonella schoenbuchensis R1] Length = 238 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 54/206 (26%), Positives = 108/206 (52%), Gaps = 5/206 (2%) Query: 193 SFVL-GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251 S++L G++ S+F T + F G L ++ +S+ +F ++ I + +L Sbjct: 32 SYILPGLLFSVFLTLFATIFGLIFGILLAMMRLSSIKLFSSLAVIYITAMRSIPLVMVIL 91 Query: 252 GQF---NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308 F F+ G+++ +L I + + AA+ AEI+R+GL ++P+GQ A ALG+T+ Sbjct: 92 WFFVLLPFLTGTSIGANKSAL-ITFTAFEAAYFAEIMRAGLSSIPQGQKYAGQALGMTYW 150 Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368 + +VLLPQA R+++P +Q + L ++++L A+ L++ + N G E + Sbjct: 151 QNMYIVLLPQAFRNMLPVFLTQVIILFQDTTLVYAISGNSLLNGFDIVSNNFGVKQEAYI 210 Query: 369 IWMFIYLSLSIMIALFMNRLNAKIAL 394 + Y ++ ++ + L KI++ Sbjct: 211 LAAIFYFAICFTLSQVVLYLQKKISI 236 >gi|283784570|ref|YP_003364435.1| glutamine ABC transporter, permease protein [Citrobacter rodentium ICC168] gi|282948024|emb|CBG87588.1| glutamine ABC transporter, permease protein [Citrobacter rodentium ICC168] Length = 219 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 39/129 (30%), Positives = 76/129 (58%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + I + + A+IAEI R ++++ +G EA +ALGL+ R+ R V++P A+R ++P Sbjct: 90 FSAAVITIMINSGAYIAEITRGSVLSIHKGFSEAGLALGLSRRETIRHVIMPLALRRMLP 149 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 L +Q + +K++SL + +G A+L G II +A+EI +YL ++ ++ + + Sbjct: 150 SLGNQLIISIKDTSLFIVIGAAELTRSGQEIIAGNFRALEIWTAVGVVYLIITQVLNIVL 209 Query: 386 NRLNAKIAL 394 L ++ + Sbjct: 210 RSLERRMKI 218 >gi|121610411|ref|YP_998218.1| polar amino acid ABC transporter inner membrane subunit [Verminephrobacter eiseniae EF01-2] gi|121555051|gb|ABM59200.1| polar amino acid ABC transporter, inner membrane subunit [Verminephrobacter eiseniae EF01-2] Length = 249 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 32/83 (38%), Positives = 53/83 (63%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F S+ + L + A++++ +R+G+ A+ RGQ EAA A+G H A R V+ PQAMR++ P Sbjct: 96 FTSVLVTLVIFNGAYLSQTIRAGMQALHRGQYEAARAMGFGHLAALRRVVGPQAMRNVTP 155 Query: 326 PLTSQYLNLLKNSSLAVAVGFAD 348 + Q + L+K +SL +G A+ Sbjct: 156 SIVGQLVILIKETSLGSLIGLAE 178 >gi|330820138|ref|YP_004349000.1| ABC-type amino acid transport system, permease component [Burkholderia gladioli BSR3] gi|327372133|gb|AEA63488.1| ABC-type amino acid transport system, permease component [Burkholderia gladioli BSR3] Length = 216 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 34/97 (35%), Positives = 59/97 (60%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P +++ + L+ +T+A++AEI R + AVPRGQ EA+ +L +++ + R V+LPQA R Sbjct: 84 PPWVAATLGLTFFTSAYLAEIWRGCVEAVPRGQWEASASLAMSYLEQLRHVILPQAARIA 143 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 + P + +K+++L +GF +L G I N T Sbjct: 144 VGPTVGFGVQAVKDTALVSIIGFTELTRAGTVISNAT 180 >gi|289626773|ref|ZP_06459727.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289648366|ref|ZP_06479709.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. aesculi str. 2250] gi|330868474|gb|EGH03183.1| amino acid ABC transporter permease [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 277 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 45/119 (37%), Positives = 74/119 (62%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IALS A+++EI R+G+I V GQ EAA+AL L + V +PQAMR+IIPP T+Q Sbjct: 148 IALSLNYGAYLSEIFRAGIIGVSAGQREAALALALRPAQIFWRVTVPQAMRTIIPPTTNQ 207 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 ++++LK+SSL +G +++ + + + + IE++ +Y +SI + L +RL Sbjct: 208 FISMLKDSSLISVMGVWEVMFLAQSYGRSSYRYIEMLTTAAVLYWIMSIGLELLQSRLE 266 >gi|260662607|ref|ZP_05863502.1| glutamine ABC transporter permease component [Lactobacillus fermentum 28-3-CHN] gi|260553298|gb|EEX26241.1| glutamine ABC transporter permease component [Lactobacillus fermentum 28-3-CHN] Length = 462 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 49/177 (27%), Positives = 89/177 (50%), Gaps = 23/177 (12%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 + +P++ ++ F+ G+P+++ G + P F + + L Sbjct: 309 RGMPMIVLAFFIYIGMPSVI----------------------GHKI-PLFTAGILTLMLD 345 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 A+I IV+ G AV RGQ EAA +LGL + KA V++PQ ++ ++P L +Q + LK Sbjct: 346 EGAYIGAIVKGGFQAVDRGQWEAARSLGLPYYKALVKVIMPQGIKIMVPSLVNQLIITLK 405 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393 ++S+ A+G +L G II Q + ++ LI IY+ + ++ N + K+A Sbjct: 406 DTSILSAIGVMELTQTGTVIIAQNMEGFKMWLIIGVIYIIIITLLTWLSNYVQRKMA 462 >gi|295400465|ref|ZP_06810443.1| polar amino acid ABC transporter, inner membrane subunit [Geobacillus thermoglucosidasius C56-YS93] gi|312112430|ref|YP_003990746.1| polar amino acid ABC transporter inner membrane subunit [Geobacillus sp. Y4.1MC1] gi|294977368|gb|EFG52968.1| polar amino acid ABC transporter, inner membrane subunit [Geobacillus thermoglucosidasius C56-YS93] gi|311217531|gb|ADP76135.1| polar amino acid ABC transporter, inner membrane subunit [Geobacillus sp. Y4.1MC1] Length = 234 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 59/206 (28%), Positives = 102/206 (49%), Gaps = 11/206 (5%) Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247 +I S V GIV+ + A + R F L ++Y+S I G P L+ + L + + Sbjct: 26 QILAVSTVFGIVIGI-AAAIPRLFRIPILSQLVVVYVS--FIRGTPILIQLFL---IFYG 79 Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307 P L I + + P + + I S A +EI R + A+ GQ EAA ++G++ Sbjct: 80 VPALFLLFDIDLTRMDPLYFVM-ITYSLSNGAVFSEIFRGAIQAIDYGQTEAAYSVGMSD 138 Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367 + +++PQA+ P + + ++ LK++SLA +G D+V G T+I T A+E+ Sbjct: 139 SQTFFRIIIPQAIGIAFPNMANCIISSLKDTSLAFTIGVMDMVGRGETLIASTAHALEVY 198 Query: 368 ----LIWMFIYLSLSIMIALFMNRLN 389 +I+ + L L + LF R+N Sbjct: 199 ISLSIIYYIVVLVLEKLFRLFEKRVN 224 >gi|167895469|ref|ZP_02482871.1| polar amino acid uptake ABC transporter, PAAT family, permease protein [Burkholderia pseudomallei 7894] gi|167920093|ref|ZP_02507184.1| polar amino acid uptake ABC transporter, PAAT family, permease protein [Burkholderia pseudomallei BCC215] gi|254196113|ref|ZP_04902538.1| polar amino acid uptake ABC transporter, PAAT family, permease protein [Burkholderia pseudomallei S13] gi|169652857|gb|EDS85550.1| polar amino acid uptake ABC transporter, PAAT family, permease protein [Burkholderia pseudomallei S13] Length = 219 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 58/207 (28%), Positives = 105/207 (50%), Gaps = 14/207 (6%) Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247 K V S VLG+++ L L R + A+ Y+S L+ G P LV + + +++ Sbjct: 23 KFAVASMVLGLIVGLLVA-LVRIGSNRLLSAIAQGYVS--LMRGTPLLVQM---FVVYYG 76 Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307 P +G ++ P + + L+ A+++E +R ++ + RGQ A+ +LGLTH Sbjct: 77 LPDIG-------ISLDPTAAGI-LTLTLNAGAYLSESMRGAILGIGRGQWAASHSLGLTH 128 Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367 + R V+ PQA+R +P L + ++L+K++SL + +L+ +I T Q + + Sbjct: 129 VQTLRHVICPQALRLAVPSLGNTLISLIKDTSLVSVITVTELLRSTQEVIASTFQPLPLY 188 Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIAL 394 L IY LS ++A R+ + AL Sbjct: 189 LAAAAIYWVLSTLLARLQGRIETRCAL 215 Score = 38.5 bits (88), Expect = 2.0, Method: Compositional matrix adjust. Identities = 28/96 (29%), Positives = 45/96 (46%), Gaps = 12/96 (12%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151 G T A + M+ I+G LV R+ +N+L++ I + YV + R P LV +F +Y Sbjct: 17 GAALTMKFAVASMVLGLIVGLLVALVRIGSNRLLSAIAQGYVSLMRGTPLLVQMFVVYYG 76 Query: 152 VLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187 +PD G+ L+ TLT++ A Sbjct: 77 ------LPD------IGISLDPTAAGILTLTLNAGA 100 >gi|169824809|ref|YP_001692420.1| amino acid ABC transporter permease [Finegoldia magna ATCC 29328] gi|167831614|dbj|BAG08530.1| amino acid ABC transporter permease protein [Finegoldia magna ATCC 29328] Length = 526 Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 39/120 (32%), Positives = 72/120 (60%), Gaps = 1/120 (0%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G ++P +L+I +S T A+++E+VR G+ +V GQMEA ALG+TH ++ V+LPQ Sbjct: 376 GIDMAPISAALFI-VSVNTGAYLSEVVRGGINSVDVGQMEACKALGMTHSQSMINVILPQ 434 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378 A+++I+P + ++++ +K++S+ + +L V +I T E + IY L+ Sbjct: 435 AIKNILPSIGNEFVINIKDTSVLNVISVTELFFVSKSIAGSTYNIFETYAVTCVIYFVLT 494 >gi|331085656|ref|ZP_08334739.1| hypothetical protein HMPREF0987_01042 [Lachnospiraceae bacterium 9_1_43BFAA] gi|330406579|gb|EGG86084.1| hypothetical protein HMPREF0987_01042 [Lachnospiraceae bacterium 9_1_43BFAA] Length = 215 Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 41/148 (27%), Positives = 84/148 (56%), Gaps = 8/148 (5%) Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304 +F L Q N IGG ++ ++ + S AA+ AEI RSG+ ++P+GQ EAA LG Sbjct: 70 YFAPYYLWQMN-IGGYKLT----AILLGCSLNYAAYFAEIYRSGIESIPKGQYEAAALLG 124 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364 + ++ ++LPQ +++++P +T++ + L+K++SL ++ + ++ +V I + Sbjct: 125 YSRQQTFLRIVLPQMVKNVLPSVTNEVITLVKDTSLVYSLSYIEMFAVAKQIAAAQTTVV 184 Query: 365 EIILIWMFIYL---SLSIMIALFMNRLN 389 + +F Y+ +++ + LF +LN Sbjct: 185 PFFIAGVFYYIFNYAVAWGMELFEKKLN 212 >gi|307250982|ref|ZP_07532908.1| Binding-protein-dependent transport system inner membrane component family protein [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|306857010|gb|EFM89140.1| Binding-protein-dependent transport system inner membrane component family protein [Actinobacillus pleuropneumoniae serovar 4 str. M62] Length = 219 Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 44/121 (36%), Positives = 67/121 (55%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IAL A+++AE +R+GL+AVP+GQ EAA A+GL + R V+ PQA IP + + Sbjct: 91 IALVFLGASYMAEALRAGLLAVPKGQTEAAKAIGLNRFQVFRYVIFPQAWAVSIPAIGAN 150 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 L L+K +S+ AV A+L+ V II + E + + YL + + I+L Sbjct: 151 VLFLIKETSVISAVAVAELMFVTKDIIGMDYKTNEALFLLFASYLVILLPISLLARHFEN 210 Query: 391 K 391 K Sbjct: 211 K 211 >gi|294635975|ref|ZP_06714417.1| L-cystine ABC transporter, permease protein [Edwardsiella tarda ATCC 23685] gi|291090704|gb|EFE23265.1| L-cystine ABC transporter, permease protein [Edwardsiella tarda ATCC 23685] Length = 232 Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 38/124 (30%), Positives = 70/124 (56%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + I + A+ +EI+R +++VPRGQ EAA A+G++ + R V+LPQ++ +P Sbjct: 102 FPAALIGFTLNVGAYSSEIMRGAILSVPRGQWEAASAIGMSSSQTLRRVILPQSVFVSLP 161 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PL++ +++LLK++SLA + ++ I+ + + I IYL+ S ++ Sbjct: 162 PLSNSFISLLKDTSLAAVITVPEMFLAAQRIVAVNYEPLIIYSETALIYLAFSTLLGKLQ 221 Query: 386 NRLN 389 RL Sbjct: 222 LRLE 225 >gi|323526704|ref|YP_004228857.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia sp. CCGE1001] gi|323383706|gb|ADX55797.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. CCGE1001] Length = 225 Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 55/199 (27%), Positives = 99/199 (49%), Gaps = 14/199 (7%) Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252 SF +G+ L+ F L R F K A+ Y+ +L G P LV + + + + P +G Sbjct: 30 SFAIGLALA-FIVALVRLFGPKWAVAVVRFYV--WLFRGSPLLVQL---FVIFYGLPNVG 83 Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312 V + I S A+ +E++R + ++P+GQ EAA ++G+T +A R Sbjct: 84 --------IVLDPLTAAIIGFSLNVGAYNSEVIRGVIESIPKGQWEAAYSMGMTREQALR 135 Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372 +LPQA R +PPL++ ++ L+K++SLA + ++ I + T + + + Sbjct: 136 RAILPQAARVALPPLSNSFIALVKDTSLAAVLTVPEVFQAAQRIASVTYEPLILYTEAAL 195 Query: 373 IYLSLSIMIALFMNRLNAK 391 +YL S +++ RL K Sbjct: 196 VYLLFSSVLSSAQVRLERK 214 >gi|311898351|dbj|BAJ30759.1| putative amino acid ABC transporter substrate-binding protein [Kitasatospora setae KM-6054] Length = 315 Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 45/134 (33%), Positives = 78/134 (58%), Gaps = 9/134 (6%) Query: 258 GGSTVSPEFMSL-------YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH-RK 309 G S VS E M L + L+ + AA+ AEI+R G+++V GQ+EAA ALG+ R+ Sbjct: 146 GPSFVSFETMDLLGALGAAVLGLALHQAAYAAEIIRGGVLSVDAGQLEAAAALGIPKFRQ 205 Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369 A R+V +PQAMR I+P ++ ++L K +S+ + +L I +TG+ + ++++ Sbjct: 206 AWRIV-VPQAMRGILPNAANEVVSLFKGTSIVYVMAIGELFYQVQVIYGRTGRVVPLLMV 264 Query: 370 WMFIYLSLSIMIAL 383 Y+ L+ ++L Sbjct: 265 ATVWYVLLTTALSL 278 >gi|303253105|ref|ZP_07339254.1| putative ABC transporter, permease protein [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|307248741|ref|ZP_07530754.1| Binding-protein-dependent transport system inner membrane component family protein [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|302647787|gb|EFL77994.1| putative ABC transporter, permease protein [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|306854668|gb|EFM86858.1| Binding-protein-dependent transport system inner membrane component family protein [Actinobacillus pleuropneumoniae serovar 2 str. S1536] Length = 219 Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 44/121 (36%), Positives = 67/121 (55%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IAL A+++AE +R+GL+AVP+GQ EAA A+GL + R V+ PQA IP + + Sbjct: 91 IALVFLGASYMAEALRAGLLAVPKGQAEAAKAIGLNRFQVFRYVIFPQAWAVSIPAIGAN 150 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 L L+K +S+ AV A+L+ V II + E + + YL + + I+L Sbjct: 151 VLFLIKETSVISAVAVAELMFVTKDIIGMDYKTNEALFLLFASYLVILLPISLLARHFEN 210 Query: 391 K 391 K Sbjct: 211 K 211 >gi|289624565|ref|ZP_06457519.1| arginine/ornithine ABC transporter, permease protein [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|330866227|gb|EGH00936.1| arginine/ornithine ABC transporter permease [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 232 Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 52/167 (31%), Positives = 86/167 (51%), Gaps = 11/167 (6%) Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL----YIALSCYTA 278 ++ T++I G P LV + L Y L QF+ + S + P S +A + T+ Sbjct: 56 WLYTYVIRGTPMLVQLFLIYY------GLAQFDAVRESFLWPWLSSATFCACLAFTINTS 109 Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338 A+ AEI+ L A P G++EAA A+G++ K R +LLP A+R +P +++ + +L+ + Sbjct: 110 AYTAEIIAGSLKATPAGEIEAARAMGMSKAKMYRRILLPSALRRALPQYSNEVIMMLQTT 169 Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS-IMIALF 384 SLA V D+ T+ Q E + YL L+ I++ LF Sbjct: 170 SLASIVTLIDITGAARTVNAQFYLPFEAYVTAGVFYLCLTFILVRLF 216 >gi|307727762|ref|YP_003910975.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia sp. CCGE1003] gi|307588287|gb|ADN61684.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. CCGE1003] Length = 218 Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 38/140 (27%), Positives = 74/140 (52%), Gaps = 1/140 (0%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G VSP +++ + L+ YT+A++ +I R + AVPRGQ A +LG+T + R ++ PQ Sbjct: 80 GVDVSP-WVAATVTLTLYTSAYLVDIWRGCVEAVPRGQWAAGASLGMTFGQQLRYIVWPQ 138 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378 A++ + P + ++K+++LA +GF +L G I N + I + IY ++ Sbjct: 139 ALKIAVAPTVGFLVQVVKSTALASIIGFTELTKTGTMITNAAFRPFPIYGMVAMIYFAMC 198 Query: 379 IMIALFMNRLNAKIALKEKK 398 + + L + + + + Sbjct: 199 FPLTWYARVLEKRNKVGQHR 218 >gi|241203420|ref|YP_002974516.1| polar amino acid ABC transcriptional regulator inner membrane protein [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240857310|gb|ACS54977.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 230 Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 62/210 (29%), Positives = 107/210 (50%), Gaps = 23/210 (10%) Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL---YISTFLIF-GLPTLVLIALKY-- 242 IFVFS ++G SLFA R +PLL ++ ++F G+P +++I L Y Sbjct: 28 IFVFSTIVG---SLFAMVEYRR--------VPLLRELVVAYKVVFKGVPMVIVIFLAYYG 76 Query: 243 ---QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299 L F ++G ++ G ST P +++L +AL+ AAF AE+V+ L + GQ +A Sbjct: 77 LPPTLQFLTSLVG-IDYNGHST--PNWITLIVALTACVAAFQAEVVKGALNSFDNGQADA 133 Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359 A +LG + R V+LPQ + + IP L + + ++K SL A+ D+ + Sbjct: 134 AYSLGYKRSQVFRRVMLPQVIVAAIPDLANSIMVIMKALSLGFAIEVVDIFAQSQLTAAL 193 Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 +E LI + IY+ ++ ++ +R+ Sbjct: 194 NFYYLEAFLIAVVIYMVIAYIVTYAADRME 223 >gi|86360504|ref|YP_472392.1| amino acid ABC transporter permease [Rhizobium etli CFN 42] gi|86284606|gb|ABC93665.1| probable amino acid ABC transporter, permease protein [Rhizobium etli CFN 42] Length = 230 Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 63/213 (29%), Positives = 107/213 (50%), Gaps = 17/213 (7%) Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240 LT+ IFV S ++G SLFA + + + L + Y F G+P +V+I L Sbjct: 20 LTLAMALAIFVLSTIIG---SLFA--MVEYRRVPVLRQLVVAYKVAFK--GVPMVVVIFL 72 Query: 241 KY-----QLHFDKPVLG-QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294 Y L F ++G ++N G ST P +++L +AL+ AAF AE+V+ L + Sbjct: 73 AYYGLPSALQFLTSLVGVEYN--GHST--PNWVTLIVALTACVAAFQAEVVKGALNSFDT 128 Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354 GQ +AA +LG R+ R V+LPQ + + IP L + ++ ++K SL A+ D+ + Sbjct: 129 GQADAAYSLGYKKRQLFRRVMLPQVIVAAIPDLANSFMVIMKALSLGFAIEVVDIFAQSQ 188 Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387 +E L+ + IY+ ++ + +R Sbjct: 189 LTAALNFYYLEAFLVAVVIYMVIAYAVTQIADR 221 >gi|219669812|ref|YP_002460247.1| polar amino acid ABC transporter inner membrane subunit [Desulfitobacterium hafniense DCB-2] gi|219540072|gb|ACL21811.1| polar amino acid ABC transporter, inner membrane subunit [Desulfitobacterium hafniense DCB-2] Length = 262 Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 61/216 (28%), Positives = 109/216 (50%), Gaps = 26/216 (12%) Query: 180 TLTMDT---NAKIFVFSFVLGIVLSLFATRLS---RHFHEKTGKA--LPLLYISTF---L 228 TL +DT F+ F++ I+++ F+ LS F GK+ LPL Y S + Sbjct: 46 TLRLDTVYLYRTKFIDGFLMTIIIAFFSLILSLIIGSFLAFAGKSRFLPLHYFSKAYVEI 105 Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGST--VSPEFMSLYIALSCYTAAFIAEIVR 286 I G P LV I + F +I + +S ++ I LS ++ A+I EI+R Sbjct: 106 IRGTPLLVQIYV-------------FFYIIATAMHLSNRYVLGVIILSVFSGAYICEIIR 152 Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346 +G+ ++ Q+E A +LG T + R +++PQ + I+PPL Q ++L+K+SSL + Sbjct: 153 AGIESIEASQIETARSLGFTSYQRYRYIIIPQVFKRILPPLAGQLVSLIKDSSLLSVIAV 212 Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382 ++L + + T E ++ +Y+ L++ I+ Sbjct: 213 SELTKNVQEVDSFTFATFENYIVLALLYMILTVPIS 248 >gi|325661856|ref|ZP_08150477.1| hypothetical protein HMPREF0490_01215 [Lachnospiraceae bacterium 4_1_37FAA] gi|325471834|gb|EGC75051.1| hypothetical protein HMPREF0490_01215 [Lachnospiraceae bacterium 4_1_37FAA] Length = 215 Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 41/148 (27%), Positives = 84/148 (56%), Gaps = 8/148 (5%) Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304 +F L Q N IGG ++ ++ + S AA+ AEI RSG+ ++P+GQ EAA LG Sbjct: 70 YFAPYYLWQMN-IGGYKLT----AILLGCSLNYAAYFAEIYRSGIESIPKGQYEAAALLG 124 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364 + ++ ++LPQ +++++P +T++ + L+K++SL ++ + ++ +V I + Sbjct: 125 YSKQQTFLRIVLPQMVKNVLPSVTNEVITLVKDTSLVYSLSYIEMFAVAKQIAAAQTTVV 184 Query: 365 EIILIWMFIYL---SLSIMIALFMNRLN 389 + +F Y+ +++ + LF +LN Sbjct: 185 PFFIAGVFYYIFNYAVAWGMELFEKKLN 212 >gi|307246615|ref|ZP_07528686.1| Binding-protein-dependent transport system inner membrane component family protein [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|307255600|ref|ZP_07537405.1| Binding-protein-dependent transport system inner membrane component family protein [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|307260051|ref|ZP_07541763.1| Binding-protein-dependent transport system inner membrane component family protein [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|306852487|gb|EFM84721.1| Binding-protein-dependent transport system inner membrane component family protein [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306861449|gb|EFM93438.1| Binding-protein-dependent transport system inner membrane component family protein [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306865887|gb|EFM97763.1| Binding-protein-dependent transport system inner membrane component family protein [Actinobacillus pleuropneumoniae serovar 11 str. 56153] Length = 219 Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 44/121 (36%), Positives = 67/121 (55%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IAL A+++AE +R+GL+AVP+GQ EAA A+GL + R V+ PQA IP + + Sbjct: 91 IALVFLGASYMAEALRAGLLAVPKGQTEAAKAIGLNRFQVFRYVIFPQAWAVSIPAIGAN 150 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 L L+K +S+ AV A+L+ V II + E + + YL + + I+L Sbjct: 151 VLFLIKETSVISAVAVAELMFVTKDIIGMDYKTNEALFLLFASYLVILLPISLLARHFEN 210 Query: 391 K 391 K Sbjct: 211 K 211 >gi|271500847|ref|YP_003333872.1| polar amino acid ABC transporter inner membrane subunit [Dickeya dadantii Ech586] gi|270344402|gb|ACZ77167.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya dadantii Ech586] Length = 238 Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 42/137 (30%), Positives = 77/137 (56%), Gaps = 1/137 (0%) Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321 VSP F+ IALS AA+ ++ +R L AVP+GQ E+ ALG++ R +++PQ R Sbjct: 101 VSP-FLCGVIALSLLYAAYASQTLRGALKAVPQGQWESGQALGMSKGVIFRRLIMPQMWR 159 Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 +P L +Q+L LLK+++L + DL+ +I +T + +I IYL++++ Sbjct: 160 HALPGLGNQWLVLLKDTALVSLISVNDLMLQTKSIATRTQEPFTWYMIAAAIYLAITLFS 219 Query: 382 ALFMNRLNAKIALKEKK 398 + + ++ + E++ Sbjct: 220 QVILKKIETRATRFERR 236 >gi|170696519|ref|ZP_02887643.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia graminis C4D1M] gi|170138566|gb|EDT06770.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia graminis C4D1M] Length = 218 Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 38/140 (27%), Positives = 74/140 (52%), Gaps = 1/140 (0%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G VSP +++ + L+ YT+A++ +I R + AVPRGQ A +LG+T + R ++ PQ Sbjct: 80 GVDVSP-WVAATVTLTLYTSAYLVDIWRGCVEAVPRGQWAAGASLGMTFAQQLRYIVWPQ 138 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378 A++ + P + ++K+++LA +GF +L G I N + I + IY ++ Sbjct: 139 ALKIAVAPTVGFLVQVVKSTALASIIGFTELTKTGTMITNAAFRPFPIYGMVAMIYFAMC 198 Query: 379 IMIALFMNRLNAKIALKEKK 398 + + L + + + + Sbjct: 199 FPLTWYARVLEKRNKVGQHR 218 >gi|229592161|ref|YP_002874280.1| putative histidine transporter permease [Pseudomonas fluorescens SBW25] gi|229364027|emb|CAY51589.1| putative histidine transport system permease protein [Pseudomonas fluorescens SBW25] Length = 232 Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 52/167 (31%), Positives = 85/167 (50%), Gaps = 11/167 (6%) Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL----YIALSCYTA 278 ++ T++I G P LV + L Y L QF + S + P S +A + T+ Sbjct: 56 WLYTYVIRGTPMLVQLFLIYY------GLAQFEAVRESVLWPLLSSATFCACLAFAINTS 109 Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338 A+ AEI+ L A P G++EAA A+G++ K R +LLP A+R +P +++ + +L+ + Sbjct: 110 AYTAEIIAGSLKATPNGEIEAAKAMGMSRYKLYRRILLPSALRRALPQYSNEVIMMLQTT 169 Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS-IMIALF 384 SLA V D+ T+ Q E + YL L+ I++ LF Sbjct: 170 SLASIVTLIDITGAARTVNAQFYLPFEAYITAGVFYLCLTFILVRLF 216 >gi|284048144|ref|YP_003398483.1| polar amino acid ABC transporter, inner membrane subunit [Acidaminococcus fermentans DSM 20731] gi|283952365|gb|ADB47168.1| polar amino acid ABC transporter, inner membrane subunit [Acidaminococcus fermentans DSM 20731] Length = 263 Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 42/121 (34%), Positives = 65/121 (53%), Gaps = 7/121 (5%) Query: 249 PVLGQFNFIGGSTVSPEFM-SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307 P G +G S+V + + IAL+ + +A IAEI+R GL A+ +GQ EA A G Sbjct: 88 PAPGVRRMLGLSSVETKLLFKCTIALTIFESAIIAEIIRGGLNAISKGQFEAGYAQGFNM 147 Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS------VGGTIINQTG 361 + ++LPQA R IIP L SQ + ++K++S V +L++ G + N TG Sbjct: 148 VQVMWYIILPQAFRKIIPTLMSQVITIIKDTSFLANVATIELMARVNKVLSGAALYNGTG 207 Query: 362 Q 362 + Sbjct: 208 K 208 >gi|170722936|ref|YP_001750624.1| polar amino acid ABC transporter inner membrane subunit [Pseudomonas putida W619] gi|169760939|gb|ACA74255.1| polar amino acid ABC transporter, inner membrane subunit [Pseudomonas putida W619] Length = 232 Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 52/167 (31%), Positives = 84/167 (50%), Gaps = 11/167 (6%) Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL----YIALSCYTA 278 ++ T++I G P LV + L Y L QF + S P S +A + T+ Sbjct: 56 WLYTYVIRGTPMLVQLFLIYY------GLAQFEAVRESIFWPLLSSATFCACLAFAVNTS 109 Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338 A+ AEI+ L A P G++EAA A+G++ K R +LLP A+R +P +++ + +L+ + Sbjct: 110 AYTAEIIAGSLKATPHGEIEAAKAMGMSRMKMYRRILLPSALRRALPQYSNEVIMMLQTT 169 Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS-IMIALF 384 SLA V D+ T+ Q E + YL L+ I++ LF Sbjct: 170 SLASIVTLIDITGAARTVNAQYYLPFEAYITAGVFYLCLTFILVRLF 216 >gi|115376859|ref|ZP_01464082.1| amino acid ABC transporter binding protein and permease protein [Stigmatella aurantiaca DW4/3-1] gi|115366162|gb|EAU65174.1| amino acid ABC transporter binding protein and permease protein [Stigmatella aurantiaca DW4/3-1] Length = 441 Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 34/72 (47%), Positives = 51/72 (70%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + + L AA+ AE+ R+G++AVPRGQMEAA+ALG+T A R V++PQA R +P Sbjct: 312 FSAAILGLGLNYAAYEAEVYRAGVLAVPRGQMEAALALGMTTPLALRRVVVPQAFRVALP 371 Query: 326 PLTSQYLNLLKN 337 +T+ ++ LLK+ Sbjct: 372 GVTNDFIALLKD 383 >gi|320353113|ref|YP_004194452.1| PAAT family amino acid ABC transporter membrane protein 1 [Desulfobulbus propionicus DSM 2032] gi|320121615|gb|ADW17161.1| amino acid ABC transporter membrane protein 1, PAAT family [Desulfobulbus propionicus DSM 2032] Length = 226 Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 37/127 (29%), Positives = 73/127 (57%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F S+ + L T A+ A I R ++++PRGQ AA ALG++ + R ++LPQ +R IP Sbjct: 89 FFSVAVVLGMTTGAYQANIFRGAILSLPRGQFRAASALGMSDVQTIRSIILPQVLRLSIP 148 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 +++Y +LK+S+LA +G ++++ + ++T Q + + L +Y L+ + + Sbjct: 149 AWSNEYSIILKDSALAFVIGAPEIMARAQFVASRTYQHLPLYLTAGLLYFLLTWLGVWGL 208 Query: 386 NRLNAKI 392 +L ++ Sbjct: 209 RKLEQRL 215 >gi|310820157|ref|YP_003952515.1| amino acid ABC transporter permease [Stigmatella aurantiaca DW4/3-1] gi|309393229|gb|ADO70688.1| Amino acid ABC transporter, permease protein [Stigmatella aurantiaca DW4/3-1] Length = 482 Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 34/72 (47%), Positives = 51/72 (70%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + + L AA+ AE+ R+G++AVPRGQMEAA+ALG+T A R V++PQA R +P Sbjct: 353 FSAAILGLGLNYAAYEAEVYRAGVLAVPRGQMEAALALGMTTPLALRRVVVPQAFRVALP 412 Query: 326 PLTSQYLNLLKN 337 +T+ ++ LLK+ Sbjct: 413 GVTNDFIALLKD 424 >gi|309389820|gb|ADO77700.1| amino acid ABC transporter membrane protein, PAAT family [Halanaerobium praevalens DSM 2228] Length = 212 Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 34/114 (29%), Positives = 65/114 (57%), Gaps = 1/114 (0%) Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 A+ EI R G+ ++ +GQ EAA LG+ +R+ +++PQ ++ ++P +++ +NL+K+ Sbjct: 96 GAYFTEIFRGGIESIGQGQYEAAKVLGMNYRQTMSRIIIPQTIKRVLPATSNEAINLVKD 155 Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 S+L +G DL+ + + I I+ +F YL +S +I +L AK Sbjct: 156 SALVAVIGLGDLLRAAKVSVTRDFSIIPFIIAAVF-YLLISSVIVTVFRKLEAK 208 >gi|91778420|ref|YP_553628.1| polar amino acid ABC transporter inner membrane protein [Burkholderia xenovorans LB400] gi|296159867|ref|ZP_06842688.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. Ch1-1] gi|91691080|gb|ABE34278.1| amino acid ABC transporter membrane protein 2, PAAT family [Burkholderia xenovorans LB400] gi|295889850|gb|EFG69647.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. Ch1-1] Length = 218 Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 38/140 (27%), Positives = 74/140 (52%), Gaps = 1/140 (0%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G VSP +++ + L+ YT+A++ +I R + AVPRGQ A +LG+T + R ++ PQ Sbjct: 80 GVDVSP-WVAATVTLTLYTSAYLVDIWRGCVEAVPRGQWAAGASLGMTFGQQLRYIVWPQ 138 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378 A++ + P + ++K+++LA +GF +L G I N + I + IY ++ Sbjct: 139 ALKIAVAPTVGFLVQVVKSTALASIIGFTELTKTGTMITNAAFRPFPIYGMVAMIYFAMC 198 Query: 379 IMIALFMNRLNAKIALKEKK 398 + + L + + + + Sbjct: 199 FPLTWYARVLEKRQKVGQHR 218 >gi|302537324|ref|ZP_07289666.1| glutamate transporter permease [Streptomyces sp. C] gi|302446219|gb|EFL18035.1| glutamate transporter permease [Streptomyces sp. C] Length = 248 Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 36/86 (41%), Positives = 53/86 (61%) Query: 255 NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLV 314 N GG+ F +AL+ YT F+ E +RSG+ VP GQ EAA ALGL+ + L+ Sbjct: 106 NLGGGTFKEIGFRLAVLALTAYTGTFVCEALRSGINTVPVGQAEAARALGLSFFQVLTLI 165 Query: 315 LLPQAMRSIIPPLTSQYLNLLKNSSL 340 +LPQA R++I PL + + L KN+++ Sbjct: 166 VLPQAFRAVIAPLANVLIALTKNTTV 191 >gi|283852209|ref|ZP_06369482.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio sp. FW1012B] gi|283572435|gb|EFC20422.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio sp. FW1012B] Length = 237 Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 44/133 (33%), Positives = 78/133 (58%), Gaps = 4/133 (3%) Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321 +S F S + L +AA+ ++I R + +P GQ+ AA ALG++ A R ++LPQA+R Sbjct: 96 LSSGFFSAVVVLGLTSAAYQSQIFRGAIRGLPPGQLRAARALGMSDATAIRAIILPQALR 155 Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ--AIEIILIWMFIYLSLSI 379 IP +++Y LLK+S+LA +G ++++ ++ T Q + I+ +F +L+ + Sbjct: 156 LSIPAWSNEYSILLKDSALAFTIGVLEVMARTRSVAATTHQPLPLSILAGALFFFLTWAG 215 Query: 380 MIALFMNRLNAKI 392 + AL RL AK+ Sbjct: 216 IKAL--KRLEAKV 226 >gi|261493138|ref|ZP_05989673.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Mannheimia haemolytica serotype A2 str. BOVINE] gi|261495783|ref|ZP_05992219.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Mannheimia haemolytica serotype A2 str. OVINE] gi|261308548|gb|EEY09815.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Mannheimia haemolytica serotype A2 str. OVINE] gi|261311193|gb|EEY12361.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Mannheimia haemolytica serotype A2 str. BOVINE] Length = 227 Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 47/169 (27%), Positives = 85/169 (50%), Gaps = 13/169 (7%) Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282 YIS +I G P LV I + + + P +G F + P ++ I S A+ + Sbjct: 65 YIS--IIRGTPMLVQICIVF---YGLPAIGIF-------IDPIPAAI-IGFSLNIGAYGS 111 Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342 E +R+ + +VP+GQ EA +G+T+ + R ++ PQA R +PPL++ ++ L K++SLA Sbjct: 112 ETIRAAISSVPKGQWEAGYTIGMTYMQTFRRIIAPQAFRVAVPPLSNTFIGLFKDTSLAS 171 Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 V ++ V + N + + + + IY ++ L RL + Sbjct: 172 VVTVTEMFRVAQQVANMSYDFLPVYIEAGLIYWCFCWVLFLIQARLEVR 220 >gi|116254188|ref|YP_770026.1| transmembrane component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] gi|115258836|emb|CAK09942.1| putative transmembrane component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] Length = 222 Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 60/204 (29%), Positives = 94/204 (46%), Gaps = 34/204 (16%) Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRH----------FHEKTGKALPLLYISTFLIFGLPT 234 T + V + VLGIVLS+ R + + + P L F+ FGLP+ Sbjct: 23 TTLALTVSTSVLGIVLSILGAAARRGPYPWLRKLVGLYVEIMRNTPFLVQLFFIFFGLPS 82 Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294 L G + P + +A++ AA+ E+V +GL A+PR Sbjct: 83 L-----------------------GIRLDP-ITAAVLAMTLNMAAYTIEVVGAGLDAIPR 118 Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354 GQ EAA ALGL R ++LPQA+ I P LTSQ + ++ S++ + +L Sbjct: 119 GQKEAAQALGLRPRLVFFKIILPQAIAIIFPALTSQIIIMMLESAVVSQISVRELAQEAD 178 Query: 355 TIINQTGQAIEIILIWMFIYLSLS 378 + ++T ++ E L+ IYLS+S Sbjct: 179 LLQSRTFRSFETYLVATLIYLSMS 202 >gi|150017369|ref|YP_001309623.1| polar amino acid ABC transporter, inner membrane subunit [Clostridium beijerinckii NCIMB 8052] gi|149903834|gb|ABR34667.1| polar amino acid ABC transporter, inner membrane subunit [Clostridium beijerinckii NCIMB 8052] Length = 225 Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 43/136 (31%), Positives = 73/136 (53%), Gaps = 6/136 (4%) Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320 +S E +S+ I S + AA + +IVR L ++P+ Q+E+ ALGL + + R VL+PQA+ Sbjct: 88 NLSGEVVSV-IVFSLWGAAEMGDIVRGSLQSLPKHQIESGKALGLNYYQIYRYVLMPQAI 146 Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM-----FIYL 375 R +IP + ++K +SL V +G D+V +G II + W+ F+Y Sbjct: 147 RRMIPGTINLATRMIKTTSLVVLIGVIDVVKMGQQIIESSRFQFPTASFWIYGFIFFLYF 206 Query: 376 SLSIMIALFMNRLNAK 391 + ++ RL +K Sbjct: 207 IICYPLSKISKRLESK 222 >gi|291521932|emb|CBK80225.1| amino acid ABC transporter membrane protein, PAAT family (TC 3.A.1.3.-) [Coprococcus catus GD/7] Length = 236 Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 37/122 (30%), Positives = 76/122 (62%) Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 + A+I+EI+RSG+ +V GQMEA A+GL+ + +++PQA+++I+P L +++++L+K Sbjct: 114 SGAYISEIMRSGIQSVDPGQMEAGRAVGLSFGTSMIKIVIPQAVKNILPTLGNEFISLIK 173 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 +S+ VG ADL I + + + + L+ IY+ L ++I+L + + + + Sbjct: 174 ETSVVSFVGAADLYVAFNYIGSNSYEFMVPYLVMALIYIVLVLIISLLIKLMERSLKKSD 233 Query: 397 KK 398 ++ Sbjct: 234 RR 235 >gi|260222062|emb|CBA31251.1| Octopine transport system permease protein occM [Curvibacter putative symbiont of Hydra magnipapillata] Length = 231 Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 39/114 (34%), Positives = 65/114 (57%), Gaps = 4/114 (3%) Query: 251 LGQFNFIGGST----VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306 L QF ++ S + F +IAL+ AA++AE +R+G++A+P GQ EAA A G+ Sbjct: 82 LSQFEWVRASVAWVVLEDAFYCGFIALTLNIAAYMAEDIRAGILAIPVGQTEAARAFGMP 141 Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 R ++LPQA+R P L ++ ++LLK ++L + DL V + N++ Sbjct: 142 SGTLLRRIVLPQALRIATPALGNEVVSLLKATALVSTITVFDLTGVARRLSNES 195 >gi|237669674|ref|ZP_04529651.1| glutamine ABC transporter, permease/substrate-binding protein [Clostridium butyricum E4 str. BoNT E BL5262] gi|237654748|gb|EEP52311.1| glutamine ABC transporter, permease/substrate-binding protein [Clostridium butyricum E4 str. BoNT E BL5262] Length = 221 Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 39/120 (32%), Positives = 75/120 (62%), Gaps = 3/120 (2%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IAL+ A+++EI R+G+ AV GQMEA+ +LGL + K + V+LPQA++ +IP + +Q Sbjct: 93 IALALNAGAYMSEIFRAGIQAVDVGQMEASRSLGLGYLKTMQKVILPQAIKVMIPSIINQ 152 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE---IILIWMFIYLSLSIMIALFMNR 387 ++ +K++S+ + +L S G I+ + + +E I+ I FI ++ +++ ++ R Sbjct: 153 FIVTIKDTSILTVITIRELTSSGQIIVARNFKPLETYAIVGIMYFILITTLSILSKYIER 212 >gi|206560034|ref|YP_002230798.1| putative amino acid transport system, membrane protein [Burkholderia cenocepacia J2315] gi|198036075|emb|CAR51969.1| putative amino acid transport system, membrane protein [Burkholderia cenocepacia J2315] Length = 252 Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 45/128 (35%), Positives = 72/128 (56%), Gaps = 10/128 (7%) Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291 +P L+LI + +F PVL + G +TV AL+ A++A V +G++A Sbjct: 83 IPVLMLI---FWTYFLMPVLLHMDVPGLATV-------VCALALIGGAYLAHAVHAGIVA 132 Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 GQ +A ++LGLT + R VLLPQA+R + P +Q++ L+K++SLA VG +L Sbjct: 133 AGDGQWQAGLSLGLTRWQTVRYVLLPQAIRIMTPSFVNQWVALVKDTSLAYIVGVPELSF 192 Query: 352 VGGTIINQ 359 V + N+ Sbjct: 193 VATQVNNR 200 >gi|325570568|ref|ZP_08146294.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus casseliflavus ATCC 12755] gi|325156414|gb|EGC68594.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus casseliflavus ATCC 12755] Length = 493 Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 28/67 (41%), Positives = 52/67 (77%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IAL+ +AA++AEI+R+G+ AV +GQ+EAA +LG+ +A R ++ PQA+++I+P L ++ Sbjct: 368 IALALNSAAYVAEIIRAGINAVNKGQLEAARSLGMNQIQAMRFIIFPQAIKNILPALGNE 427 Query: 331 YLNLLKN 337 ++ ++K Sbjct: 428 FVTVIKE 434 Score = 37.4 bits (85), Expect = 4.4, Method: Compositional matrix adjust. Identities = 21/54 (38%), Positives = 32/54 (59%) Query: 96 TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 T +LA G++ +I G+L+ +LS +K + I VY+E R P LV IF +Y Sbjct: 297 TIFLALVGVLFGSIGGSLLAFMKLSKSKALKVIAAVYIEYVRGTPLLVQIFIVY 350 >gi|313115214|ref|ZP_07800698.1| ABC transporter, permease protein [Faecalibacterium cf. prausnitzii KLE1255] gi|310622492|gb|EFQ05963.1| ABC transporter, permease protein [Faecalibacterium cf. prausnitzii KLE1255] Length = 227 Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 39/133 (29%), Positives = 75/133 (56%), Gaps = 7/133 (5%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + IA + A+ AE +R L +VP+GQ+EA +G++ + R ++LPQA+R+ +P Sbjct: 95 FPAAVIAFAFNEGAYCAETMRGALESVPQGQLEAGYCVGMSWWQIMRRIVLPQALRTAVP 154 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 L++ + ++K++SLA + A+L G + +T I++ IY ++++ LF Sbjct: 155 ALSNSLIGMIKDTSLASNITVAELFMAGQRVAART-------YIFLPIYCEVAVVYLLFC 207 Query: 386 NRLNAKIALKEKK 398 + AL E++ Sbjct: 208 TVITKLQALLERR 220 >gi|182438505|ref|YP_001826224.1| putative amino acid ABC transporter permease protein [Streptomyces griseus subsp. griseus NBRC 13350] gi|178467021|dbj|BAG21541.1| putative amino acid ABC transporter permease protein [Streptomyces griseus subsp. griseus NBRC 13350] Length = 243 Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 41/112 (36%), Positives = 64/112 (57%) Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 A+ AE+VR + +VPRGQ EAAIAL L+ + V+LPQA +IP T+ + LLK Sbjct: 101 GAYGAEVVRGAINSVPRGQYEAAIALNLSPSRRLWKVILPQAWVQMIPSFTNLLIQLLKA 160 Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 + L + ADL++V + ++TG+ + L + Y L+ + + MN L Sbjct: 161 TPLLWLISAADLMTVIQQLRDRTGETLTAYLTLLAAYFVLAYALTMLMNLLE 212 >gi|167840668|ref|ZP_02467352.1| ABC transporter, inner-membrane component [Burkholderia thailandensis MSMB43] Length = 217 Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 53/183 (28%), Positives = 91/183 (49%), Gaps = 12/183 (6%) Query: 216 GKALPLLY-ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALS 274 G+A L Y + +LI G P L + + Y F P++G +TV ++L+ Sbjct: 44 GRAFALPYGVFIWLIRGTPYLSQLVIIY---FGLPMIGVTMSAVEATV--------VSLA 92 Query: 275 CYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNL 334 Y +A+ AEI R+ +VPRGQ+EAA A G++ R R + LPQA+ +P + +Q + + Sbjct: 93 LYASAYFAEIFRAAWASVPRGQLEAAAAFGVSRRATFRAIELPQALAFALPLIANQTILV 152 Query: 335 LKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394 +K S++A + +L ++ T I + + Y L+ ++L R A+I Sbjct: 153 IKESAVASIITVPELTMTASDVVASTYTYIGPYALLIACYWLLTQAVSLLAQRATARIPF 212 Query: 395 KEK 397 K Sbjct: 213 LRK 215 >gi|158321703|ref|YP_001514210.1| polar amino acid ABC transporter, inner membrane subunit [Alkaliphilus oremlandii OhILAs] gi|158141902|gb|ABW20214.1| polar amino acid ABC transporter, inner membrane subunit [Alkaliphilus oremlandii OhILAs] Length = 225 Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 53/185 (28%), Positives = 88/185 (47%), Gaps = 31/185 (16%) Query: 195 VLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY-------QLHFD 247 VLGIV L T S+ + + LY+ TF I +P LV + + Y +H D Sbjct: 38 VLGIVFGLIMTSKSKWI-----RFISRLYLETFRI--IPILVWLYIVYFGITSALNIHLD 90 Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307 ++ I S + A + +IVR L ++P+ QME+ ALGL+ Sbjct: 91 GEIVA-----------------IIVFSFWGIAEMGDIVRGSLESLPKHQMESGKALGLSF 133 Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367 + R VL+PQA+R ++P + ++K +SL +G ++V VG II+ + I+ Sbjct: 134 IQLYRYVLIPQAVRRMVPGAINLATRMVKTTSLVTLIGAVEVVKVGQQIIDASRFQIDTA 193 Query: 368 LIWMF 372 W++ Sbjct: 194 SFWIY 198 Score = 37.0 bits (84), Expect = 5.6, Method: Compositional matrix adjust. Identities = 23/67 (34%), Positives = 39/67 (58%), Gaps = 1/67 (1%) Query: 99 LAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPI 158 +AF ++ +++G + G S +K + +I R+Y+E FR IP LV ++ +Y + S L I Sbjct: 28 IAFISILIGSVLGIVFGLIMTSKSKWIRFISRLYLETFRIIPILVWLYIVYFGITSALNI 87 Query: 159 P-DHSIV 164 D IV Sbjct: 88 HLDGEIV 94 >gi|330820725|ref|YP_004349587.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia gladioli BSR3] gi|327372720|gb|AEA64075.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia gladioli BSR3] Length = 239 Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 59/187 (31%), Positives = 96/187 (51%), Gaps = 22/187 (11%) Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252 F GI L++ A R +R +PLL + F +P L+LI + +F P+L Sbjct: 45 GFAAGIALAM-AGRAAR---------VPLLVVIGFF-RAIPVLMLI---FWTYFLLPILF 90 Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312 + P ++ ALS A++A V +G++AV Q +A ++LGLT + R Sbjct: 91 HVDV-------PGLAAVVCALSLIGGAYLAHSVHAGIVAVGDAQWQAGLSLGLTRWQTLR 143 Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ-TGQAIEIILIWM 371 V+LPQA+R + P +Q+++L+K++SLA VG +L V + N+ I + L Sbjct: 144 EVVLPQAVRIMAPSFVNQWVSLVKDTSLAYIVGVNELSFVATQVNNRLMVYPIPVFLFVA 203 Query: 372 FIYLSLS 378 F+YL L Sbjct: 204 FLYLVLC 210 >gi|310640333|ref|YP_003945091.1| inner membrane amino-acid abc transporter permease protein yecs [Paenibacillus polymyxa SC2] gi|309245283|gb|ADO54850.1| Inner membrane amino-acid ABC transporter permease protein yecS [Paenibacillus polymyxa SC2] Length = 215 Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 56/205 (27%), Positives = 104/205 (50%), Gaps = 14/205 (6%) Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248 I + S + G+++ L ++R + + L +Y+S +I G P LV IA+ Y Sbjct: 22 ITIVSMLFGLIIGLIVA-VARLKGNRPVRWLARMYVS--IIRGTPVLVQIAVIYY----- 73 Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308 L + GS + +ALS T A+++E R ++AVP+GQ EAA A G++ Sbjct: 74 -GLDDYGISFGSLTAA-----CLALSINTGAYLSETFRGAILAVPQGQTEAAYATGMSPG 127 Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368 + ++LPQA+R I P+ + ++ +LK +SL +G ++L+ + Q + +L Sbjct: 128 QTMWRIILPQAVRIAIAPMGNTFVGMLKETSLVSVIGVSELMRQAQLLQAQYLLYMPFLL 187 Query: 369 IWMFIYLSLSIMIALFMNRLNAKIA 393 +Y +SI + + R+ ++A Sbjct: 188 EIALMYWIMSIGFSAILERVEKRLA 212 Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust. Identities = 29/94 (30%), Positives = 44/94 (46%), Gaps = 19/94 (20%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G T ++ M+ IIG +V RL N+ V W+ R+YV + R P LV I + Sbjct: 12 LLKGAYYTLYITIVSMLFGLIIGLIVAVARLKGNRPVRWLARMYVSIIRGTPVLVQIAVI 71 Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLT 182 Y +G L++ G+SF +LT Sbjct: 72 Y-----------------YG--LDDYGISFGSLT 86 >gi|121610492|ref|YP_998299.1| polar amino acid ABC transporter inner membrane subunit [Verminephrobacter eiseniae EF01-2] gi|121555132|gb|ABM59281.1| polar amino acid ABC transporter, inner membrane subunit [Verminephrobacter eiseniae EF01-2] Length = 219 Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 42/138 (30%), Positives = 78/138 (56%), Gaps = 1/138 (0%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G +SP +L +AL +A+ AE R+G+ ++ +GQ+EAA+A+G++ +A R V++PQ Sbjct: 83 GLQMSPLATAL-VALVLNISAYNAETFRAGINSIRKGQLEAALAMGMSRHQALRKVVIPQ 141 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378 A R I+P + S ++ L K++SL + +L I QT + +E++ IY + Sbjct: 142 ATRRILPVIASTWVALFKDTSLVSVIAVGELAYSAMQIRAQTFRVLELLTAMAAIYWLMG 201 Query: 379 IMIALFMNRLNAKIALKE 396 A ++ ++ +KE Sbjct: 202 YPQAKLVDWIHRHYGVKE 219 >gi|257876942|ref|ZP_05656595.1| amino acid ABC transporter [Enterococcus casseliflavus EC20] gi|257811108|gb|EEV39928.1| amino acid ABC transporter [Enterococcus casseliflavus EC20] Length = 493 Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 28/67 (41%), Positives = 52/67 (77%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IAL+ +AA++AEI+R+G+ AV +GQ+EAA +LG+ +A R ++ PQA+++I+P L ++ Sbjct: 368 IALALNSAAYVAEIIRAGINAVNKGQLEAARSLGMNQIQAMRFIIFPQAIKNILPALGNE 427 Query: 331 YLNLLKN 337 ++ ++K Sbjct: 428 FVTVIKE 434 Score = 37.4 bits (85), Expect = 4.4, Method: Compositional matrix adjust. Identities = 21/54 (38%), Positives = 32/54 (59%) Query: 96 TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 T +LA G++ +I G+L+ +LS +K + I VY+E R P LV IF +Y Sbjct: 297 TIFLALVGVLFGSIGGSLLAFMKLSKSKALKVIAAVYIEYVRGTPLLVQIFIVY 350 >gi|172060591|ref|YP_001808243.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia ambifaria MC40-6] gi|171993108|gb|ACB64027.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria MC40-6] Length = 241 Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 45/128 (35%), Positives = 72/128 (56%), Gaps = 10/128 (7%) Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291 +P L+LI + +F PVL + G +TV AL+ A++A V +G++A Sbjct: 72 IPVLMLI---FWTYFLMPVLLHMDVPGLATV-------VCALALVGGAYLAHAVHAGIVA 121 Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 GQ +A ++LGLT + R VLLPQA+R + P +Q++ L+K++SLA VG +L Sbjct: 122 AGDGQWQAGLSLGLTRWQTVRHVLLPQAIRIMTPSFVNQWVALVKDTSLAYIVGVPELSF 181 Query: 352 VGGTIINQ 359 V + N+ Sbjct: 182 VATQVNNR 189 >gi|90962038|ref|YP_535954.1| polar amino acid ABC transporter permease [Lactobacillus salivarius UCC118] gi|227891057|ref|ZP_04008862.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus salivarius ATCC 11741] gi|301300403|ref|ZP_07206605.1| ABC transporter, permease protein [Lactobacillus salivarius ACS-116-V-Col5a] gi|90821232|gb|ABD99871.1| Polar amino acid ABC transporter, permease protein [Lactobacillus salivarius UCC118] gi|227867146|gb|EEJ74567.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus salivarius ATCC 11741] gi|300214736|gb|ADJ79152.1| Polar amino acid ABC transporter, permease protein [Lactobacillus salivarius CECT 5713] gi|300852005|gb|EFK79687.1| ABC transporter, permease protein [Lactobacillus salivarius ACS-116-V-Col5a] Length = 213 Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 48/180 (26%), Positives = 93/180 (51%), Gaps = 25/180 (13%) Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269 F+ + PLL F+ +GLP L+ L LG+F+ +L Sbjct: 52 RFYVWLMRGTPLLLQLIFVFYGLP---LVGLT---------LGRFD-----------AAL 88 Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329 + + YTA F AEI R GL ++ +GQ E+A L LT+ + R ++ PQ ++ ++P + + Sbjct: 89 FAFILNYTAYF-AEIFRGGLQSIDKGQYESAKVLRLTYWQTIRKIVTPQVVKIVLPSIGN 147 Query: 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 + +NL+K+SSL +G DL+ G ++ + ++++ + +YL ++ ++ + +L Sbjct: 148 EVINLVKDSSLVYVIGIGDLLRAGNVATSRDVTLVPLVMVGV-VYLVMTAVLTFILRKLE 206 >gi|33597552|ref|NP_885195.1| glutamine ABC transporter permease protein [Bordetella parapertussis 12822] gi|33573980|emb|CAE38299.1| glutamine transport system permease protein [Bordetella parapertussis] Length = 219 Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 43/116 (37%), Positives = 67/116 (57%) Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 + A+IAEIVR L++V +G EA A+GL K ++ P A R +IPPL +Q + LK Sbjct: 101 SGAYIAEIVRGSLLSVHKGLKEAGQAMGLPFYKILLYIIGPVAFRRMIPPLGNQCIISLK 160 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 +SSL + +G A+L G I+ +A+EI +YL L+ +AL + L ++ Sbjct: 161 DSSLFIVIGVAELTRQGQEIMASNFRAVEIWSAVAIVYLILTGTMALGLRMLEKRM 216 >gi|326803632|ref|YP_004321450.1| ABC transporter, permease protein [Aerococcus urinae ACS-120-V-Col10a] gi|326651009|gb|AEA01192.1| ABC transporter, permease protein [Aerococcus urinae ACS-120-V-Col10a] Length = 497 Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 37/128 (28%), Positives = 70/128 (54%), Gaps = 1/128 (0%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + IA AA+ AEI R G+ +VP+GQ E+ LG+ ++ R ++LPQ M+ +P Sbjct: 370 FTAALIAFVVNYAAYFAEIFRGGITSVPQGQYESIKVLGIGWQRGFRRIILPQVMKITLP 429 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 + ++ + L+K++SL +G +L+ G N I ++ +F YL + + L + Sbjct: 430 SVGNEVIALVKDTSLVYVIGLGELLRAGSIAANTYATIIPYLVCGVF-YLIFTAFVTLAL 488 Query: 386 NRLNAKIA 393 R+ +++ Sbjct: 489 RRIEYRVS 496 >gi|257868053|ref|ZP_05647706.1| amino acid ABC transporter [Enterococcus casseliflavus EC30] gi|257874383|ref|ZP_05654036.1| amino acid ABC transporter [Enterococcus casseliflavus EC10] gi|257802136|gb|EEV31039.1| amino acid ABC transporter [Enterococcus casseliflavus EC30] gi|257808547|gb|EEV37369.1| amino acid ABC transporter [Enterococcus casseliflavus EC10] Length = 493 Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 28/67 (41%), Positives = 52/67 (77%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IAL+ +AA++AEI+R+G+ AV +GQ+EAA +LG+ +A R ++ PQA+++I+P L ++ Sbjct: 368 IALALNSAAYVAEIIRAGINAVNKGQLEAARSLGMNQIQAMRFIIFPQAIKNILPALGNE 427 Query: 331 YLNLLKN 337 ++ ++K Sbjct: 428 FVTVIKE 434 Score = 37.4 bits (85), Expect = 4.4, Method: Compositional matrix adjust. Identities = 21/54 (38%), Positives = 32/54 (59%) Query: 96 TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 T +LA G++ +I G+L+ +LS +K + I VY+E R P LV IF +Y Sbjct: 297 TIFLALVGVLFGSIGGSLLAFMKLSKSKALKVIAAVYIEYVRGTPLLVQIFIVY 350 >gi|121610493|ref|YP_998300.1| Fis family transcriptional regulator [Verminephrobacter eiseniae EF01-2] gi|121555133|gb|ABM59282.1| transcriptional regulator, Fis family [Verminephrobacter eiseniae EF01-2] Length = 221 Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 55/203 (27%), Positives = 106/203 (52%), Gaps = 17/203 (8%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 V S + G+V++L R + + + L + YI + + +P LV++ Y F P+ Sbjct: 31 VSSILAGLVITLL-----RLYGPRWLRPLLVFYIDS--MRAIPVLVVLVWIY---FAFPI 80 Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 L NF +P F + +AL+ + AA+ AE++R+G+ ++ GQ AA+ALG++ + Sbjct: 81 LVGLNF------AP-FWAALVALTLHIAAYAAEVIRAGIESIRPGQTRAALALGMSRAQI 133 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370 R VLLPQA ++P S +K++++A + +L+ T+ Q+ + +E+ Sbjct: 134 LRKVLLPQATIRMLPAFGSILTMAIKDTAIASVIAVPELMHKAETVAGQSYRPVEVSSAV 193 Query: 371 MFIYLSLSIMIALFMNRLNAKIA 393 M Y + + ++RL ++A Sbjct: 194 MLAYFLILFPVTRGVDRLYQRLA 216 >gi|104782882|ref|YP_609380.1| arginine/ornithine transport membrane protein AotM [Pseudomonas entomophila L48] gi|95111869|emb|CAK16593.1| arginine/ornithine transport membrane protein AotM [Pseudomonas entomophila L48] Length = 232 Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 52/167 (31%), Positives = 85/167 (50%), Gaps = 11/167 (6%) Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL----YIALSCYTA 278 ++ T++I G P LV + L Y L QF + S + P S +A + T+ Sbjct: 56 WLYTYVIRGTPMLVQLFLIYY------GLAQFEAVRESFLWPWLSSATFCACLAFAINTS 109 Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338 A+ AEI+ L A P G++EAA A+G++ K R +LLP A+R +P +++ + +L+ + Sbjct: 110 AYTAEIIAGSLKATPHGEIEAAKAIGMSRMKMYRRILLPSALRRALPQYSNEVIMMLQTT 169 Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS-IMIALF 384 SLA V D+ T+ Q E + YL L+ I++ LF Sbjct: 170 SLASIVTLIDITGAARTVNAQFYLPFEAYITAGVFYLCLTFILVRLF 216 >gi|110347319|ref|YP_666136.1| polar amino acid ABC transporter, inner membrane subunit [Mesorhizobium sp. BNC1] gi|110287495|gb|ABG65553.1| amino acid ABC transporter membrane protein 2, PAAT family [Chelativorans sp. BNC1] Length = 232 Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 41/128 (32%), Positives = 76/128 (59%), Gaps = 10/128 (7%) Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290 G+P L+LI + ++F PV G+ +SP F SL +A+ + A+++E++R+ + Sbjct: 70 GIPLLMLI---FWVYFFLPV------ALGTPISP-FWSLILAIVVFQTAYLSEVLRAAIE 119 Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 A+P+GQ EAA++LGL++ V LPQA+ + IP + +Q+ +++K +SL + +L Sbjct: 120 ALPKGQTEAALSLGLSYFPRIWKVTLPQALYNSIPGILNQFTSMIKETSLGYVLAVEELT 179 Query: 351 SVGGTIIN 358 + N Sbjct: 180 YAANKVNN 187 >gi|330811272|ref|YP_004355734.1| Putative ABC transporter, permease component [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327379380|gb|AEA70730.1| Putative ABC transporter, permease component [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 232 Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 52/167 (31%), Positives = 85/167 (50%), Gaps = 11/167 (6%) Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL----YIALSCYTA 278 ++ T++I G P LV + L Y L QF + S + P S +A + T+ Sbjct: 56 WLYTYVIRGTPMLVQLFLIYY------GLAQFAIVRESFLWPWLSSATFCACLAFAINTS 109 Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338 A+ AEI+ L A P G++EAA A+G++ K R +LLP A+R +P +++ + +L+ + Sbjct: 110 AYTAEIIAGSLRATPNGEIEAAKAMGMSRYKLYRRILLPSALRRALPQYSNEVIMMLQTT 169 Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS-IMIALF 384 SLA V D+ T+ Q E + YL L+ I++ LF Sbjct: 170 SLASIVTLIDITGAARTVNAQYYLPFEAYITAGVFYLCLTFILVRLF 216 >gi|307706790|ref|ZP_07643595.1| binding-protein-dependent transport system inner membrane component family protein [Streptococcus mitis SK321] gi|307617875|gb|EFN97037.1| binding-protein-dependent transport system inner membrane component family protein [Streptococcus mitis SK321] Length = 213 Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 50/174 (28%), Positives = 82/174 (47%), Gaps = 20/174 (11%) Query: 215 TGKALPLLYISTFLIFGLPTLVLIALKYQLHFD---------------KPVLGQFNFIGG 259 +G ++ L + LIF +P VLIA Q+H+ P+L Q FI Sbjct: 13 SGASMTLQVFALVLIFSIPLGVLIAFALQVHWKLLHHLINIYIWIMRGTPLLLQLIFIYY 72 Query: 260 STVS-----PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLV 314 S + IA AA+ AEI R G+ +P+GQ EAA L R + Sbjct: 73 VLPSIGIRLDRLPAAIIAFVLNYAAYFAEIFRGGIDTIPKGQYEAAKVLKFNPFATVRYI 132 Query: 315 LLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368 +LPQ + ++P + ++ ++L+K++SL A+G +DL+ T N+ + + L Sbjct: 133 ILPQVTKIVLPSVFNEVMSLVKDTSLVYALGISDLILASRTAANRDASLVPMFL 186 >gi|290473963|ref|YP_003466837.1| arginine ABC transporter membrane protein [Xenorhabdus bovienii SS-2004] gi|289173270|emb|CBJ80045.1| arginine transport protein (ABC superfamily, membrane) [Xenorhabdus bovienii SS-2004] Length = 240 Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 57/179 (31%), Positives = 91/179 (50%), Gaps = 8/179 (4%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFD-KPVLGQFNF---IGGSTVSPEFMSLYIA 272 + LP + + F+ FG L LI L FD ++ QF I VSP F+ IA Sbjct: 55 RGLPEILVVLFIYFGSSQL-LITLSE--GFDVNLIVWQFRIQMEIDNFDVSP-FLCGVIA 110 Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 LS +A+ ++ +R L AVP GQ EA ALGL+ + + +PQ R +P L +Q+L Sbjct: 111 LSLLYSAYASQTLRGALKAVPMGQREAGQALGLSQSRIFFRLTMPQMWRHALPGLGNQWL 170 Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 LLK+++L + DL+ +I +T + +I IYL ++++ + RL + Sbjct: 171 VLLKDTALVSLISVNDLMLQTKSIATRTQEPFTWYVIAAMIYLVITLVSQFILKRLEMR 229 >gi|261337914|ref|ZP_05965798.1| permease protein of ABC transporter [Bifidobacterium gallicum DSM 20093] gi|270277398|gb|EFA23252.1| permease protein of ABC transporter [Bifidobacterium gallicum DSM 20093] Length = 420 Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 37/98 (37%), Positives = 63/98 (64%), Gaps = 2/98 (2%) Query: 254 FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313 F FIG SP + ++ I+L Y + IAE+VRSG+ +P GQ EA++ALGLT ++ Sbjct: 135 FAFIGWD--SPSYWAVVISLVLYNGSVIAELVRSGVGNLPNGQREASLALGLTRTQSLMQ 192 Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 V +PQA+ +++P +Q + +LK+++L + + DL+ Sbjct: 193 VEVPQAIFAMLPAAVTQLVVVLKDTALGSIIMYTDLLQ 230 >gi|209551037|ref|YP_002282954.1| polar amino acid ABC transporter inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209536793|gb|ACI56728.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 222 Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 42/115 (36%), Positives = 66/115 (57%), Gaps = 1/115 (0%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IAL A+ EI+R G+ +V +GQ+EA ALGL RL++L A+R+I P LTSQ Sbjct: 95 IALGINGGAYAIEIIRGGVESVSKGQIEAGFALGLHKGDVFRLIVLKPALRAIYPSLTSQ 154 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS-IMIALF 384 ++ L +S+ ++ +L S I + T ++ E+ IYL +S +M+ LF Sbjct: 155 FVMLTLTTSVCTSIAAYELTSAAQRIESDTFRSFEVYFSVTTIYLVISTLMMGLF 209 >gi|152983662|ref|YP_001349725.1| ectoine/hydroxyectoine ABC transporter permease EhuD [Pseudomonas aeruginosa PA7] gi|150958820|gb|ABR80845.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD [Pseudomonas aeruginosa PA7] Length = 218 Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 60/207 (28%), Positives = 108/207 (52%), Gaps = 22/207 (10%) Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249 F + V G++ ++ R SRHF + P+ ++ F I P L+ Q++F Sbjct: 31 FTLAMVFGLLFAM--ARRSRHFW----LSWPVAWLIEF-IRSTPLLI------QVYFLFY 77 Query: 250 VLGQFNFIGGSTVSPEFMSLYIAL--SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307 VL + S V+ +L IAL +CYTA E+ R+GL +VPRGQ EA AL + Sbjct: 78 VLPSYGLSMTSLVAG---TLGIALHYACYTA----EVYRAGLDSVPRGQWEAVTALNFSP 130 Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367 +A R V+LPQA+R ++P L + + + K++ + A+ +++ + + + + +E I Sbjct: 131 WRAYRQVILPQAIRPVLPALGNYLIAMFKDTPVLSAITVVEIMQQAKNVGSDSFRYLEPI 190 Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIAL 394 + +L +SI +A + ++ + AL Sbjct: 191 TLVGVFFLLISIGLASVVRQVEKRTAL 217 >gi|115360320|ref|YP_777457.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria AMMD] gi|115285648|gb|ABI91123.1| amino acid ABC transporter membrane protein, PAAT family [Burkholderia ambifaria AMMD] Length = 218 Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 58/179 (32%), Positives = 90/179 (50%), Gaps = 22/179 (12%) Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL--IFGLPTLVLIALKYQLHFD 247 FV S VLG++L+L +R +TF+ I GLP +V + + ++F Sbjct: 28 FVLSTVLGLLLALMRVSDNRVLSNTA---------ATFINVIRGLPIIVQL---FYIYFV 75 Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307 P LG + S F+ L IA S Y A E R+G+ A+ GQ+EAA ++G+ Sbjct: 76 LPDLG----VQLSAFQAGFIGLGIAYSVYQA----ENFRAGIQAIDHGQIEAAQSIGMRG 127 Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 R V+LPQA R +PP + + +LK+SSLA + A++ G I + T Q + + Sbjct: 128 TMIMRRVVLPQAFRIALPPYGNTLVMMLKDSSLASTITVAEMTRAGQLIASSTFQNMTV 186 >gi|322373223|ref|ZP_08047759.1| amino acid ABC transporter, permease protein [Streptococcus sp. C150] gi|321278265|gb|EFX55334.1| amino acid ABC transporter, permease protein [Streptococcus sp. C150] Length = 230 Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 36/151 (23%), Positives = 83/151 (54%), Gaps = 17/151 (11%) Query: 264 PEFMSLYIALSCYT---------------AAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308 PEF++ ++ L +A I+E+ ++ A+P+GQ+EA +++GLT Sbjct: 80 PEFLNWWLGLDINNWSKLIFVLVTMVLLFSALISEVFKAAYQAIPKGQLEAGLSIGLTPE 139 Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ--TGQAIEI 366 +A ++ PQA + +P +T+ LNL+++++LA +GF D++ G +I++ ++E Sbjct: 140 QAFVRIVAPQAFKVALPNITTAILNLMRDAALAYTIGFIDVMGKGNLLISRHLGNYSLET 199 Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 +Y ++++++L ++++K + Sbjct: 200 YTAVALVYWGIALILSLISRMTEQQLSIKAR 230 >gi|113460399|ref|YP_718461.1| arginine transporter permease subunit ArtQ [Haemophilus somnus 129PT] gi|170717489|ref|YP_001783479.1| arginine ABC transporter permease [Haemophilus somnus 2336] gi|112822442|gb|ABI24531.1| amino acid ABC transporter membrane protein 1, PAAT family [Haemophilus somnus 129PT] gi|168825618|gb|ACA30989.1| polar amino acid ABC transporter, inner membrane subunit [Haemophilus somnus 2336] Length = 223 Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 59/207 (28%), Positives = 101/207 (48%), Gaps = 7/207 (3%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 V S +LG+ LS+F L H K P I T L+ GLP ++++ L Y F P Sbjct: 21 VCSLLLGLALSIFFVVLETHKWACIRK--PTATIVT-LLRGLPEILVVFLIY---FGVPE 74 Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 + ++ IG F +ALS A++ ++ +R + A+P GQ E+ ALGL+ Sbjct: 75 ILEW-VIGEYVEFGAFGCGVVALSIIFASYASQSLRGAIQAIPLGQWESGAALGLSRSYT 133 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370 +++PQ R +P L++Q+L LLK+++L +G DL+ I T Q Sbjct: 134 FIFLIMPQVWRHALPGLSNQWLVLLKDTALVSLIGVHDLMRQAELINTNTHQPFTWYGFA 193 Query: 371 MFIYLSLSIMIALFMNRLNAKIALKEK 397 +YL +++ + +L ++ E+ Sbjct: 194 ALLYLLITLFSQFIIRKLERRVTRFER 220 >gi|190404350|ref|YP_001960981.1| rcorf6 [Agrobacterium rhizogenes] gi|158322146|gb|ABW33563.1| rcorf6 [Agrobacterium rhizogenes] Length = 240 Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 59/208 (28%), Positives = 101/208 (48%), Gaps = 17/208 (8%) Query: 191 VFSFVLGIVLSLFAT---RLSRHFHEK---TGKALPLLYISTFLIFGLPTLVLIALKYQ- 243 V VLG+VLSLF R+ R F+ + PLL + FGLP L + L Q Sbjct: 35 VIGVVLGLVLSLFGLSRWRVLRWFNSAYIFVFRGTPLLVQVILIYFGLPYLTNVDLFPQD 94 Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 +H F FI ++S ++ A + + AA+ +EI R + +V GQ +A A+ Sbjct: 95 VHL-------FGFI---SISGAIVAGVTAFALHEAAYFSEISRGAIASVDHGQWDAGRAV 144 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363 G+T + ++LPQA+R ++PPL +Q + K +SL + +++ + + + T + Sbjct: 145 GMTPGLLMQRIILPQAIRIMLPPLGNQMNGMFKATSLLYLIAVPEMLFITDAVNSVTYKT 204 Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAK 391 E+ L YL+L+ + L + Sbjct: 205 FEVYLGVSIYYLALTTAWSFLQEALEKR 232 >gi|51244882|ref|YP_064766.1| amino acid ABC transporter, permease protein [Desulfotalea psychrophila LSv54] gi|50875919|emb|CAG35759.1| probable amino acid ABC transporter, permease protein [Desulfotalea psychrophila LSv54] Length = 228 Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 48/172 (27%), Positives = 97/172 (56%), Gaps = 12/172 (6%) Query: 223 YISTFLIF--GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280 +IS ++ F G+P L+L+ L Y G F +G + + +L + ++ +AA+ Sbjct: 60 FISLYVWFFRGVPILILMFLFY--------FGVFELLGLNLSALTTTALVLGMT--SAAY 109 Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340 ++I + ++++P GQ+ AA ALG+ +A ++LPQAMR IP +++Y +LK+S+L Sbjct: 110 QSQIFKGAILSLPHGQIRAAEALGMNRPQAICSIVLPQAMRVSIPAWSNEYSIILKDSAL 169 Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 A VG D+ + + ++T + + + + +YL ++++ + RL K+ Sbjct: 170 AYVVGAMDMFTRTHFVASRTYEHLTLFIFVGLLYLIITVIGVKVLARLEKKL 221 >gi|325271439|ref|ZP_08137964.1| polar amino acid ABC transporter inner membrane subunit [Pseudomonas sp. TJI-51] gi|324103421|gb|EGC00743.1| polar amino acid ABC transporter inner membrane subunit [Pseudomonas sp. TJI-51] Length = 232 Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 52/167 (31%), Positives = 83/167 (49%), Gaps = 11/167 (6%) Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL----YIALSCYTA 278 ++ T++I G P LV + L Y L QF + S P S +A T+ Sbjct: 56 WLYTYVIRGTPMLVQLFLIYY------GLAQFEAVRDSVFWPLLSSATFCACLAFGINTS 109 Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338 A+ AEI+ L A P G++EAA A+G++ K R +LLP A+R +P +++ + +L+ + Sbjct: 110 AYTAEIIAGSLKATPHGEIEAAKAMGMSRMKMYRRILLPSALRRALPQYSNEVIMMLQTT 169 Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS-IMIALF 384 SLA V D+ T+ Q E + YL L+ I++ LF Sbjct: 170 SLASIVTLIDITGAARTVNAQYYLPFEAYITAGVFYLCLTFILVRLF 216 >gi|171743316|ref|ZP_02919123.1| hypothetical protein BIFDEN_02447 [Bifidobacterium dentium ATCC 27678] gi|283455711|ref|YP_003360275.1| glutamate transport system permease gluC [Bifidobacterium dentium Bd1] gi|171278930|gb|EDT46591.1| hypothetical protein BIFDEN_02447 [Bifidobacterium dentium ATCC 27678] gi|283102345|gb|ADB09451.1| Glutamate transport system permease protein GluC [Bifidobacterium dentium Bd1] Length = 225 Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 66/215 (30%), Positives = 100/215 (46%), Gaps = 27/215 (12%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPTLVLIALKYQL 244 +FS +LG++L + G K LPL I F++ G Sbjct: 29 LFSTILGVILVMMRISPVSSLRAVAGAYVELFKNLPLTIIMVFMVLG------------- 75 Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYI-ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 Q T + F L + LS YTAAF+ E +RSG+ VP GQ EA+ AL Sbjct: 76 -----AYAQLKLSFSDTFATNFFWLAVTGLSLYTAAFVCESLRSGINTVPLGQAEASRAL 130 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS--VGGTIINQTG 361 GL+ ++ ++LPQA R + PL + + LLKNS++A A A S + I ++ Sbjct: 131 GLSFMQSATQIILPQAFRGSVAPLGNTLIALLKNSTVAAAASVATETSSLMSEMIEYRSD 190 Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 + I LI+ F Y+ L I I + L+ K+A++ Sbjct: 191 VIVPIFLIFAFGYVILIIPIGMLTTYLSNKLAVRR 225 >gi|29832824|ref|NP_827458.1| glutamine ABC transporter permease protein [Streptomyces avermitilis MA-4680] gi|29609945|dbj|BAC73993.1| putative polar amino acid ABC transporter permease protein [Streptomyces avermitilis MA-4680] Length = 317 Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 52/182 (28%), Positives = 96/182 (52%), Gaps = 22/182 (12%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 + LPL+ ++ G+P AL+ Q PVL +GG+ AL+ Sbjct: 154 RGLPLIINLMIVVLGVP-----ALRLQGVTVDPVL-----LGGT-----------ALTLT 192 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 +A++AE+ R+G+ +V Q AA +LGLT+R+A R V+LPQA+R +PPL + ++L K Sbjct: 193 YSAYVAEVFRAGIESVHPSQRAAARSLGLTNRQALRHVVLPQAVRRQVPPLLNDLVSLQK 252 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 ++ L G D V I+ ++ I+ + ++++L+I + F + + A++ + Sbjct: 253 DTGLVSIGGAVDAVRAADIIVGRSLNYTPYIVAGL-LFVALTIPMTRFTDWVTARMDRQR 311 Query: 397 KK 398 + Sbjct: 312 AQ 313 >gi|223933819|ref|ZP_03625787.1| polar amino acid ABC transporter, inner membrane subunit [Streptococcus suis 89/1591] gi|330833683|ref|YP_004402508.1| polar amino acid ABC transporter inner membrane subunit [Streptococcus suis ST3] gi|223897502|gb|EEF63895.1| polar amino acid ABC transporter, inner membrane subunit [Streptococcus suis 89/1591] gi|329307906|gb|AEB82322.1| polar amino acid ABC transporter, inner membrane subunit [Streptococcus suis ST3] Length = 219 Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 57/208 (27%), Positives = 101/208 (48%), Gaps = 21/208 (10%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 + SF G+++++ T L + K + YI +++ G P LV + Y + F P Sbjct: 29 ILSFTFGLLIAI-GTALVQIAQIPILKQVARFYI--WVVRGTPLLVQL---YVIFFGLPS 82 Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 LG V F S + S T A+ AE +R+ + +VP+GQ+EA ++G++ + Sbjct: 83 LG--------IVLDAFPSAVLVFSVNTGAYAAETIRASIESVPKGQLEAGYSVGMSFAQT 134 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370 R ++LPQA R PPL++ + L+K++SLA + ++ I +T + Sbjct: 135 MRRIILPQAFRVAFPPLSNTLIGLVKDTSLAANITVLEMFMATQQIAARTYEPFA----- 189 Query: 371 MFIYLSLSIMIALFMNRLNAKIALKEKK 398 +Y ++++ LF L A EKK Sbjct: 190 --LYCEVALVYLLFSTILTKLQAYGEKK 215 >gi|315181774|gb|ADT88687.1| arginine ABC transporter, permease protein [Vibrio furnissii NCTC 11218] Length = 229 Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 55/168 (32%), Positives = 90/168 (53%), Gaps = 4/168 (2%) Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287 +I GLP L+++ Y L +FI +SP F+S IALS A++ A+ +R Sbjct: 56 VIRGLPELLVVLFIYFGSTQVLFLITGDFI---EISP-FISGVIALSLIFASYAAQTLRG 111 Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347 L AV RGQ EAA ALG+ +A ++LPQA+R +P L +Q+L LLK+++L +G Sbjct: 112 ALKAVGRGQREAASALGIPPGRAFFRIVLPQAVRHALPGLMNQWLVLLKDTALVSLIGVT 171 Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395 DL+ T +A +YL ++++ + ++ K A++ Sbjct: 172 DLLKQAQLTSAATHEAFTWYATAAAVYLVITLITQRAVKVIDKKFAVQ 219 >gi|224369137|ref|YP_002603301.1| GlnP4 [Desulfobacterium autotrophicum HRM2] gi|223691854|gb|ACN15137.1| GlnP4 [Desulfobacterium autotrophicum HRM2] Length = 213 Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 37/87 (42%), Positives = 55/87 (63%), Gaps = 1/87 (1%) Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322 SP FMS +AL + A+ EI R +++VP+GQM AA +G+ KA R +++PQAMR Sbjct: 81 SP-FMSGALALGFASGAYQTEIFRGAILSVPQGQMTAARGIGMGRAKAIRCIIMPQAMRI 139 Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADL 349 IP L ++ +LK+SSL +G +L Sbjct: 140 AIPSLINEVSLVLKDSSLVFVIGVPEL 166 >gi|239918032|ref|YP_002957590.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Micrococcus luteus NCTC 2665] gi|281415789|ref|ZP_06247531.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Micrococcus luteus NCTC 2665] gi|239839239|gb|ACS31036.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Micrococcus luteus NCTC 2665] Length = 226 Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 56/150 (37%), Positives = 78/150 (52%), Gaps = 17/150 (11%) Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLI---ALKYQLHFDKP 249 SFVLG+VL+LF R + +AL Y++ L ++L+ A+ QL Sbjct: 33 SFVLGVVLALF-----RISPVPSLRALGTGYVNVVRNTPLTIIMLLGVLAVWGQLKISFS 87 Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309 NF F+ IALS Y AAF+ E +RSG+ VP GQ EAA ++GL Sbjct: 88 ADFTLNF---------FIYAVIALSLYHAAFMCEAIRSGVNTVPLGQAEAARSIGLGFLP 138 Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339 A R V+LPQA+R I PL + + L KN++ Sbjct: 139 AARHVILPQALRGAITPLGNTVIALTKNTT 168 >gi|89899770|ref|YP_522241.1| amino acid ABC transporter permease [Rhodoferax ferrireducens T118] gi|89344507|gb|ABD68710.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Rhodoferax ferrireducens T118] Length = 220 Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 35/130 (26%), Positives = 73/130 (56%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 + S L+ Y+ ++AE+ R+G+++VP+G EA A+GLT + +++P R+++ Sbjct: 89 DIESFVATLAIYSGGYLAEVFRAGMLSVPKGLSEAGQAIGLTRMQIRFSIIMPIMFRNVL 148 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 P L S ++L K++SLA A+ +L I ++ + +E +I +Y+ ++A+ Sbjct: 149 PALGSTVISLFKDTSLAAAIAVPELTYQARKINVESFRVVETWIIASLLYVCTCAVLAML 208 Query: 385 MNRLNAKIAL 394 R+ +A+ Sbjct: 209 FRRVERHLAI 218 >gi|222080875|ref|YP_002540238.1| amino acid ABC transporter [Agrobacterium radiobacter K84] gi|221725554|gb|ACM28643.1| amino acid ABC transporter [Agrobacterium radiobacter K84] Length = 220 Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 52/185 (28%), Positives = 86/185 (46%), Gaps = 24/185 (12%) Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273 + G+ P L + F+ FGLP++ G T+ F + IAL Sbjct: 60 EVGRGAPALVLLQFIYFGLPSV-----------------------GLTIE-SFAAAVIAL 95 Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333 + T A+ +EI+R+ L ++ GQ EAA ALGL R VLLPQ +R +P L + Sbjct: 96 AWNTGAYTSEIIRASLQSIAHGQREAAEALGLNRTDELRFVLLPQGLRVALPALLGFSIL 155 Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393 + + +SL + +LVS I + T + +L +Y +SI AL ++ + + + Sbjct: 156 IFQGTSLCFTIALPELVSRAYEIGSTTFRYFPALLCAGALYACISIPAALLVSHVEKRAS 215 Query: 394 LKEKK 398 L + Sbjct: 216 LYAQH 220 >gi|171318960|ref|ZP_02908090.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria MEX-5] gi|171095845|gb|EDT40789.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria MEX-5] Length = 241 Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 35/96 (36%), Positives = 58/96 (60%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P ++ AL+ A++A V +G++A GQ +A ++LGLT + R VLLPQA+R + Sbjct: 94 PGLATVVCALALIGGAYLAHAVHAGIVAAGDGQWQAGLSLGLTRWQTVRYVLLPQAIRIM 153 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359 P +Q++ L+K++SLA VG +L V + N+ Sbjct: 154 TPSFVNQWVALVKDTSLAYIVGVPELSFVATQVNNR 189 >gi|167646871|ref|YP_001684534.1| polar amino acid ABC transporter inner membrane subunit [Caulobacter sp. K31] gi|167349301|gb|ABZ72036.1| polar amino acid ABC transporter, inner membrane subunit [Caulobacter sp. K31] Length = 218 Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 54/157 (34%), Positives = 83/157 (52%), Gaps = 18/157 (11%) Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252 V+G L+L RLSR + A+ Y+S I G P LV + L Y + P LG Sbjct: 33 GLVIGFGLALM--RLSRSPLLRWPAAI---YVSA--IRGTPLLVQLFLIY---YGLPQLG 82 Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312 P ++ I S A+ EI+RS + AV +GQ EAA LG++ +A R Sbjct: 83 --------VQLPPLLAAGIGFSINIGAYAGEILRSAIAAVDKGQWEAASVLGMSRGQALR 134 Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349 V+LPQA R+ + PL++ +++L+K++SLA + +L Sbjct: 135 RVILPQAARTAVAPLSNSFISLVKDTSLAATIQVPEL 171 >gi|94500103|ref|ZP_01306637.1| ABC-type arginine transport system, permease component [Oceanobacter sp. RED65] gi|94427676|gb|EAT12652.1| ABC-type arginine transport system, permease component [Oceanobacter sp. RED65] Length = 220 Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 53/186 (28%), Positives = 86/186 (46%), Gaps = 11/186 (5%) Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKY---QLHFDKPVLGQFNFIGGSTVS-----PE 265 KT + + Y T LI G+P LVL+ L + Q+ F+ F + E Sbjct: 30 KTAQVVATTY--TTLIRGVPDLVLMMLIFFGGQIAFNS-FTEWLYFASDEQIDIFINIDE 86 Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F++ I + A++ E R IAV GQ+EAA A G+ + ++ PQ MR +P Sbjct: 87 FVAGVITIGFIFGAYMTETFRGAFIAVDVGQIEAAKAYGMNRWQVFTRIMFPQMMRHALP 146 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 L + + LLK ++L +G AD+V + TG+ ++ F+YL L+ + Sbjct: 147 GLGNNWQVLLKTTALVSVIGLADMVRLATEAAKTTGEPFLFLIPVAFVYLMLTAISEWVF 206 Query: 386 NRLNAK 391 RL + Sbjct: 207 KRLKKR 212 >gi|33592663|ref|NP_880307.1| glutamine ABC transporter permease protein [Bordetella pertussis Tohama I] gi|33601951|ref|NP_889511.1| glutamine ABC transporter permease protein [Bordetella bronchiseptica RB50] gi|33572309|emb|CAE41863.1| glutamine transport system permease protein [Bordetella pertussis Tohama I] gi|33576389|emb|CAE33467.1| glutamine transport system permease protein [Bordetella bronchiseptica RB50] Length = 219 Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 43/116 (37%), Positives = 67/116 (57%) Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 + A+IAEIVR L++V +G EA A+GL K ++ P A R +IPPL +Q + LK Sbjct: 101 SGAYIAEIVRGSLLSVHKGLKEAGQAMGLPFYKILLYIIGPVAFRRMIPPLGNQCIISLK 160 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 +SSL + +G A+L G I+ +A+EI +YL L+ +AL + L ++ Sbjct: 161 DSSLFIVIGVAELTRQGQEIMASNFRAVEIWSAVAIVYLILTGTMALGLRMLEKRM 216 >gi|312864574|ref|ZP_07724805.1| putative glutamine ABC transporter, permease protein GlnP [Streptococcus downei F0415] gi|311099701|gb|EFQ57914.1| putative glutamine ABC transporter, permease protein GlnP [Streptococcus downei F0415] Length = 216 Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 28/73 (38%), Positives = 52/73 (71%) Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 A + +T+A +AEI+R GL A+ +GQ EA ++ G T + R+++LPQA+R ++P + SQ+ Sbjct: 87 AFTIFTSAALAEIIRGGLNAIDQGQTEAGLSQGFTQFQVLRIIVLPQAIRKMLPSIISQF 146 Query: 332 LNLLKNSSLAVAV 344 + ++K++S +V Sbjct: 147 VTVVKDTSFLYSV 159 Score = 40.4 bits (93), Expect = 0.48, Method: Compositional matrix adjust. Identities = 20/58 (34%), Positives = 34/58 (58%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 G T +L+F ++ +TI G ++ R NK+V I +Y+E RN+P L+ IF ++ Sbjct: 16 GLWTTIYLSFIIIVLSTIFGMILAVMRNGKNKIVKLIASIYIEFVRNVPNLLWIFIVF 73 >gi|238020541|ref|ZP_04600967.1| hypothetical protein GCWU000324_00427 [Kingella oralis ATCC 51147] gi|237867521|gb|EEP68527.1| hypothetical protein GCWU000324_00427 [Kingella oralis ATCC 51147] Length = 227 Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 30/79 (37%), Positives = 53/79 (67%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IA S A+ +E VR+ +++VP+GQ EA ++G+T+ + R +++PQA+R +PPL++ Sbjct: 100 IAFSLNVGAYGSETVRAAILSVPKGQWEAGFSIGMTYMQTFRRIIVPQALRVAVPPLSNS 159 Query: 331 YLNLLKNSSLAVAVGFADL 349 ++ L K +SLA V +L Sbjct: 160 FIGLFKETSLASFVTVTEL 178 >gi|225025465|ref|ZP_03714657.1| hypothetical protein EIKCOROL_02363 [Eikenella corrodens ATCC 23834] gi|224941749|gb|EEG22958.1| hypothetical protein EIKCOROL_02363 [Eikenella corrodens ATCC 23834] Length = 229 Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 42/121 (34%), Positives = 73/121 (60%), Gaps = 2/121 (1%) Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 A++++E +R+GL++VP+GQ+EAA A+GL+ + R V+LPQA +P + + L L+K Sbjct: 108 ASYMSEALRAGLLSVPKGQVEAAKAIGLSRWQVFRFVVLPQAWAVSVPAVGANVLFLIKE 167 Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 +S+ AV A+L+ V II + E +L+ YL + + ++L A+ L+E Sbjct: 168 TSVVSAVAVAELMFVTKDIIGMDYKTNEALLLLFISYLIILLPVSLLARW--AERRLREA 225 Query: 398 K 398 K Sbjct: 226 K 226 >gi|254362205|ref|ZP_04978320.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Mannheimia haemolytica PHL213] gi|153093777|gb|EDN74716.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Mannheimia haemolytica PHL213] Length = 238 Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 47/169 (27%), Positives = 85/169 (50%), Gaps = 13/169 (7%) Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282 YIS +I G P LV I + + + P +G F + P ++ I S A+ + Sbjct: 76 YIS--IIRGTPMLVQICIVF---YGLPAIGIF-------IDPIPAAI-IGFSLNIGAYGS 122 Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342 E +R+ + +VP+GQ EA +G+T+ + R ++ PQA R +PPL++ ++ L K++SLA Sbjct: 123 ETIRAAISSVPKGQWEAGYTIGMTYMQTFRRIIAPQAFRVAVPPLSNTFIGLFKDTSLAS 182 Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 V ++ V + N + + + + IY ++ L RL + Sbjct: 183 VVTVTEMFRVAQQVANMSYDFLPVYIEAGLIYWCFCWVLFLIQARLEVR 231 >gi|170732943|ref|YP_001764890.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia cenocepacia MC0-3] gi|169816185|gb|ACA90768.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia cenocepacia MC0-3] Length = 241 Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 57/165 (34%), Positives = 87/165 (52%), Gaps = 17/165 (10%) Query: 195 VLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQF 254 VLG+ L + A L+R + L L +I F +P L+LI Y F PVL Sbjct: 42 VLGVALGV-AMALAR----GPARVLLLAFIGFFR--AIPVLMLIFWTY---FLMPVLLHM 91 Query: 255 NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLV 314 + G +TV AL+ A++A V +G++A GQ +A ++LGLT + R V Sbjct: 92 DVPGLATV-------VCALALIGGAYLAHAVHAGIVAAGDGQWQAGLSLGLTRWQTVRYV 144 Query: 315 LLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359 LLPQA+R + P +Q++ L+K++SLA VG +L V + N+ Sbjct: 145 LLPQAIRIMRPSFVNQWVALVKDTSLAYIVGVPELSFVATQVNNR 189 >gi|91783310|ref|YP_558516.1| polar amino acid ABC transporter inner membrane protein [Burkholderia xenovorans LB400] gi|91687264|gb|ABE30464.1| amino acid ABC transporter membrane protein, PAAT family [Burkholderia xenovorans LB400] Length = 219 Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 55/209 (26%), Positives = 102/209 (48%), Gaps = 18/209 (8%) Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249 +F + G VL+L H + + +Y+S ++ G P LV I + +++ P Sbjct: 29 MIFGLIAGAVLALMGVS-----HSRALNWIARIYVS--VMRGTPLLVQI---FVIYYGLP 78 Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309 G ++ P + IALS AA+++E +R ++ + +GQ AA +LGL+ R+ Sbjct: 79 SFG-------ISLDPTPAGV-IALSANVAAYLSESMRGAILGIHQGQWLAAYSLGLSRRQ 130 Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369 R V+ PQA+R +P L++ ++L+K++SL + +L+ II T Q + + L Sbjct: 131 TLRYVIAPQALRIAVPSLSNSLISLIKDTSLVSVITVTELLRSAQEIIASTYQPLPLYLA 190 Query: 370 WMFIYLSLSIMIALFMNRLNAKIALKEKK 398 +Y L M+ ++AL + Sbjct: 191 AAAVYWVLCQMLESVQRWYERRLALPSRH 219 Score = 36.2 bits (82), Expect = 8.2, Method: Compositional matrix adjust. Identities = 27/78 (34%), Positives = 38/78 (48%), Gaps = 4/78 (5%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151 G V T A MI I G ++ +S ++ + WI R+YV V R P LV IF +Y Sbjct: 17 GAVLTIKFAVLSMIFGLIAGAVLALMGVSHSRALNWIARIYVSVMRGTPLLVQIFVIYYG 76 Query: 152 V----LSVLPIPDHSIVL 165 + +S+ P P I L Sbjct: 77 LPSFGISLDPTPAGVIAL 94 >gi|330831727|ref|YP_004394679.1| putative amino-acid ABC transporter permease YckJ [Aeromonas veronii B565] gi|328806863|gb|AEB52062.1| Probable amino-acid ABC transporter permease protein YckJ [Aeromonas veronii B565] Length = 222 Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 43/133 (32%), Positives = 81/133 (60%), Gaps = 10/133 (7%) Query: 219 LPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTA 278 L +LYIS F G P LV + L L++ P L F+G F + + L+ + A Sbjct: 55 LAMLYISFFR--GTPLLVQLFL---LYYGLPQLFPI-FVGMDA----FTAAIVGLTLHFA 104 Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338 A++AE +R+ ++ + + QMEAA+++G++ +A + ++LPQA R P L + +++++K++ Sbjct: 105 AYMAESIRAAILGIHKSQMEAALSIGMSRYQAMQRIILPQAARIATPSLMNYFIDMIKST 164 Query: 339 SLAVAVGFADLVS 351 SLA +G A+++ Sbjct: 165 SLAFTLGVAEIMG 177 >gi|222151671|ref|YP_002560827.1| ABC-type amino acid transport system permease component [Macrococcus caseolyticus JCSC5402] gi|222120796|dbj|BAH18131.1| ABC-type amino acid transport system permease component [Macrococcus caseolyticus JCSC5402] Length = 242 Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 51/199 (25%), Positives = 107/199 (53%), Gaps = 13/199 (6%) Query: 205 TRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGS---- 260 T L R K +++ +Y+S +I G P LV + + + + P +G+ I G+ Sbjct: 52 TALMRVSRNKFARSIARIYVS--IIRGTPMLVQL---FIIFYGIPEVGRL--ITGNPDIK 104 Query: 261 -TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319 ++P ++ I LS A+ +EI+R G++++P GQ EAA ++G++ + ++LPQA Sbjct: 105 LNIAPVVAAI-IGLSLNVGAYASEIIRGGILSIPDGQKEAAYSIGMSEWMTMKRIVLPQA 163 Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379 +R IP L + +L+L+K++SL + A++ + T + + I ++ +Y + Sbjct: 164 IRVSIPALGNTFLSLIKDTSLLGFILVAEMFRKAQEVAATTYEFLSIYVLVGLMYWIVCF 223 Query: 380 MIALFMNRLNAKIALKEKK 398 +I++ + ++I K ++ Sbjct: 224 IISVVQGQYESRIERKYQR 242 >gi|302384917|ref|YP_003820739.1| polar amino acid ABC transporter, inner membrane subunit [Clostridium saccharolyticum WM1] gi|302195545|gb|ADL03116.1| polar amino acid ABC transporter, inner membrane subunit [Clostridium saccharolyticum WM1] Length = 220 Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 40/104 (38%), Positives = 59/104 (56%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + LS T AF++E +R L +V GQ EAA LG+T + ++LPQA R +P L + Sbjct: 95 LVLSLNTGAFMSESIRGALFSVEPGQKEAAAMLGMTELQTILRIVLPQAFRVALPSLFND 154 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374 +NLLK +SLA +G D++ + Q+ + EI L M IY Sbjct: 155 LINLLKATSLAFMLGIRDVMGQAKSEGAQSFRYFEIYLAVMLIY 198 >gi|319762081|ref|YP_004126018.1| polar amino acid abc transporter, inner membrane subunit [Alicycliphilus denitrificans BC] gi|317116642|gb|ADU99130.1| polar amino acid ABC transporter, inner membrane subunit [Alicycliphilus denitrificans BC] Length = 221 Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 64/223 (28%), Positives = 105/223 (47%), Gaps = 30/223 (13%) Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF------LIFGLPT 234 +T+ F+ S +G+VL+L GK P+ +S +I GLP Sbjct: 21 VTVQVTVLSFLLSSAIGLVLAL-------------GKLSPVRAVSVCASTVINVIRGLPI 67 Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294 +V + + ++F P +G I S + L IA S Y A E R+G+ AV Sbjct: 68 IVQL---FYIYFVLPDIG----IQLSAFQAGVIGLGIAYSAYQA----ENFRAGIEAVDP 116 Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354 GQ EAA+A+G+ R V+LPQA R +PP + + +LK+SSL + A++ G Sbjct: 117 GQREAALAMGMRPALLMRRVILPQAFRIALPPYGNTLVMMLKDSSLVSTITVAEMTRAGQ 176 Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 I + T Q + + + +YL++S+ + + RL + K Sbjct: 177 LIASSTFQNMTVYTLVALLYLAMSLPLVWSLRRLERRFGAGRK 219 >gi|326779151|ref|ZP_08238416.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC [Streptomyces cf. griseus XylebKG-1] gi|326659484|gb|EGE44330.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC [Streptomyces cf. griseus XylebKG-1] Length = 243 Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 41/112 (36%), Positives = 64/112 (57%) Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 A+ AE+VR + +VPRGQ EAAIAL L+ + V+LPQA +IP T+ + LLK Sbjct: 101 GAYGAEVVRGAINSVPRGQYEAAIALNLSPSRRLWKVILPQAWVQMIPSFTNLLIQLLKA 160 Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 + L + ADL++V + ++TG+ + L + Y L+ + + MN L Sbjct: 161 TPLLWLISAADLMTVIQQLRDRTGETLTAYLTLLAAYFVLAYALTMLMNLLE 212 >gi|302024590|ref|ZP_07249801.1| amino-acid ABC transporter permease protein [Streptococcus suis 05HAS68] Length = 219 Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 57/208 (27%), Positives = 101/208 (48%), Gaps = 21/208 (10%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 + SF G+++++ T L + K + YI +++ G P LV + Y + F P Sbjct: 29 ILSFTFGLLIAI-GTALVQIAQIPILKQVARFYI--WVVRGTPLLVQL---YVIFFGLPS 82 Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 LG V F S + S T A+ AE +R+ + +VP+GQ+EA ++G++ + Sbjct: 83 LG--------IVLDAFPSAVLVFSVNTGAYAAETIRASIESVPKGQLEAGYSVGMSFAQT 134 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370 R ++LPQA R PPL++ + L+K++SLA + ++ I +T + Sbjct: 135 MRRIILPQAFRVAFPPLSNTLIGLVKDTSLAANITVLEMFMATQQIAARTYEPFA----- 189 Query: 371 MFIYLSLSIMIALFMNRLNAKIALKEKK 398 +Y ++++ LF L A EKK Sbjct: 190 --LYCEVALVYLLFSTILTKLQAYGEKK 215 >gi|254430539|ref|ZP_05044242.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Cyanobium sp. PCC 7001] gi|197624992|gb|EDY37551.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Cyanobium sp. PCC 7001] Length = 418 Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 39/93 (41%), Positives = 64/93 (68%), Gaps = 5/93 (5%) Query: 251 LGQ--FNFIGGSTVSPE--FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306 LGQ F+ ++PE + + ++ L+ + AA++AE VRSGL AVP+GQ EAA +LGL Sbjct: 262 LGQNILGFLLPGGLAPERVWRAAWV-LTFFAAAYLAEAVRSGLAAVPKGQREAARSLGLG 320 Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339 + R V+LPQA+R +P + SQ+++LL++++ Sbjct: 321 PLQTLRHVVLPQALRVALPVMVSQFISLLQDTT 353 >gi|262274234|ref|ZP_06052046.1| ABC polar amino acid transporter inner membrane protein [Grimontia hollisae CIP 101886] gi|262222044|gb|EEY73357.1| ABC polar amino acid transporter inner membrane protein [Grimontia hollisae CIP 101886] Length = 201 Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 46/142 (32%), Positives = 83/142 (58%), Gaps = 12/142 (8%) Query: 211 FHEKTGKALPLLYISTFLIFGLPTLV-LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269 F K A+ ++YIS F G P LV L L Y L P+ F+G F + Sbjct: 24 FKVKGLDAVVIVYISFFR--GTPLLVQLFLLYYGLPQVFPI-----FVGMDA----FTAA 72 Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329 I LS + +A++AE +R ++ + + QMEA++++G+T +A + ++LPQA R P L + Sbjct: 73 VIGLSLHFSAYMAESIRGAILGIDKHQMEASLSVGMTEIQAMQRIILPQAARVATPSLMN 132 Query: 330 QYLNLLKNSSLAVAVGFADLVS 351 +++++K++SLA +G A++++ Sbjct: 133 YFIDMIKSTSLAFTLGVAEIMA 154 >gi|158425496|ref|YP_001526788.1| putative amino acid ABC transporter permease protein [Azorhizobium caulinodans ORS 571] gi|158332385|dbj|BAF89870.1| putative amino acid ABC transporter permease protein [Azorhizobium caulinodans ORS 571] Length = 235 Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 57/188 (30%), Positives = 92/188 (48%), Gaps = 31/188 (16%) Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFAT--RLSRHFHEKTGKALPLLYISTFLIFGL 232 GL+ TL T + S +LG++ +L + R S H + + +A+PL+ F+ F L Sbjct: 20 GLAVVTLLFST-----LVSLILGVMATLHSRMLRWSIHGYVEFFRAIPLIVNVFFVYFVL 74 Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292 PTL G +SP F ++ L+ + +A EIVR+G+ AV Sbjct: 75 PTL-----------------------GLDLSP-FAAVVFGLTLWGSANGIEIVRAGIEAV 110 Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352 P Q +A ALG+ + ++ PQA+R I+PP T L++ +SL VG + + V Sbjct: 111 PAHQWRSAWALGMRQWEVYWHIVAPQAIRLIVPPFTGLLTLLVQATSLGALVGVTEFLKV 170 Query: 353 GGTIINQT 360 G II ++ Sbjct: 171 GQIIIERS 178 >gi|329117370|ref|ZP_08246087.1| ABC transporter, permease protein [Streptococcus parauberis NCFD 2020] gi|326907775|gb|EGE54689.1| ABC transporter, permease protein [Streptococcus parauberis NCFD 2020] Length = 213 Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 32/91 (35%), Positives = 55/91 (60%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +A + AA+ AEI R G+ A+P+GQ EAA L ++ + R ++LPQ + ++P + ++ Sbjct: 89 LAFTMNYAAYFAEIFRGGIEAIPKGQYEAAKVLKMSQLQTIRHIILPQVFKIVLPSVFNE 148 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361 +NL+K+SSL +G DL+ T N+ Sbjct: 149 VINLVKDSSLVYVLGVGDLLLASKTAANRDA 179 >gi|306823261|ref|ZP_07456637.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Bifidobacterium dentium ATCC 27679] gi|309801906|ref|ZP_07696021.1| ABC transporter, permease protein [Bifidobacterium dentium JCVIHMP022] gi|304553893|gb|EFM41804.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Bifidobacterium dentium ATCC 27679] gi|308221462|gb|EFO77759.1| ABC transporter, permease protein [Bifidobacterium dentium JCVIHMP022] Length = 225 Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 66/215 (30%), Positives = 100/215 (46%), Gaps = 27/215 (12%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPTLVLIALKYQL 244 +FS +LG++L + G K LPL I F++ G Sbjct: 29 LFSTILGVILVMMRISPVSSLRAVAGAYVELFKNLPLTIIMVFMVLG------------- 75 Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYI-ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 Q T + F L + LS YTAAF+ E +RSG+ VP GQ EA+ AL Sbjct: 76 -----AYAQLKLSFSDTFATNFFWLAVTGLSLYTAAFVCESLRSGINTVPLGQAEASRAL 130 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS--VGGTIINQTG 361 GL+ ++ ++LPQA R + PL + + LLKNS++A A A S + I ++ Sbjct: 131 GLSFMQSATQIILPQAFRGSVAPLGNTLIALLKNSTVAAAASVATETSSLMSEMIEYRSD 190 Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 + I LI+ F Y+ L I I + L+ K+A++ Sbjct: 191 VIVPIFLIFAFGYVILIIPIGMLTTYLSNKLAVRR 225 >gi|293375605|ref|ZP_06621879.1| ABC transporter, permease protein [Turicibacter sanguinis PC909] gi|292645822|gb|EFF63858.1| ABC transporter, permease protein [Turicibacter sanguinis PC909] Length = 225 Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 51/192 (26%), Positives = 97/192 (50%), Gaps = 17/192 (8%) Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240 +T++ + + S VLG+V+ +F K + + LY++T I +P LVL+ L Sbjct: 24 VTLEISLISVMISVVLGLVMGMFM-----RVKTKVVRLICRLYLNTVRI--VPQLVLLFL 76 Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300 Y K G +S E S+ + S + A + ++VR L ++P+ Q E A Sbjct: 77 AY-FGLSKSF--------GINLSGEVASI-LVFSFWGIAEMGDLVRGALDSIPKHQYETA 126 Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 +A+GL R+ + +++PQ +R ++P + ++K +SL V +G ++V VG II + Sbjct: 127 LAIGLNQRQIYQYIIIPQTIRRLLPQTINLVTRIIKTTSLIVLIGVVEVVKVGQQIIEAS 186 Query: 361 GQAIEIILIWMF 372 + +W++ Sbjct: 187 RLTVPTAALWIY 198 >gi|206558855|ref|YP_002229615.1| putative amino acid ABC transporter permease [Burkholderia cenocepacia J2315] gi|198034892|emb|CAR50764.1| putative amino acid ABC transporter permease protein [Burkholderia cenocepacia J2315] Length = 226 Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 54/199 (27%), Positives = 100/199 (50%), Gaps = 14/199 (7%) Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252 SF +G++L+ F L+R F + +A+ YI +L G P LV + + + + P +G Sbjct: 30 SFAIGLLLA-FGAALTRLFGPRWAQAVVRFYI--WLFRGSPLLVQL---FVIFYGLPNVG 83 Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312 V + I S A+ AE++R + ++P+GQ EAA ++ +T +A R Sbjct: 84 --------IVLDPLTAAVIGFSLNVGAYNAEVIRGVIESMPKGQWEAAYSMSMTRAQALR 135 Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372 +LPQA R +P L++ +++L+K++SLA + ++ I T + + + Sbjct: 136 RAILPQAARVALPALSNSFISLVKDTSLAAVLTVPEIFQAAQRIAAVTYEPLILYTEAAL 195 Query: 373 IYLSLSIMIALFMNRLNAK 391 IYL S +++ RL + Sbjct: 196 IYLLFSSVLSTLQRRLETR 214 >gi|330809875|ref|YP_004354337.1| Amino-acid ABC transporter, permease component [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327377983|gb|AEA69333.1| Amino-acid ABC transporter, permease component [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 242 Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 48/131 (36%), Positives = 73/131 (55%), Gaps = 10/131 (7%) Query: 226 TFLIFGLPTLVLI-----ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280 T LI G+P LVL+ +L+ L LG + +I ++P F++ I L A+ Sbjct: 67 TTLIRGVPDLVLMLLIFYSLQTWLTVITVALG-WEYI---EINP-FVAGIITLGFIYGAY 121 Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340 E R ++AVPRGQ+EAA A GL+ + R V+ PQ MR +P L + ++ +LK ++L Sbjct: 122 FTETFRGAMLAVPRGQVEAATAYGLSRAQRFRFVVFPQMMRFALPGLGNNWMVILKATAL 181 Query: 341 AVAVGFADLVS 351 +G ADLV Sbjct: 182 VSIIGLADLVK 192 >gi|324997392|ref|ZP_08118504.1| glutamate permease [Pseudonocardia sp. P1] Length = 292 Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 35/85 (41%), Positives = 56/85 (65%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F ++ + L Y + +AE+ R+G+ AVPRGQ EAA ALGL + VLLPQA RS++P Sbjct: 136 FWAVVLGLMLYNGSVLAEVFRAGVNAVPRGQREAAYALGLRKTQVMTNVLLPQAFRSMLP 195 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLV 350 + SQ + +LK+++L + + +L+ Sbjct: 196 TILSQLVVVLKDTALGFIILYPELL 220 >gi|300868202|ref|ZP_07112834.1| Polar amino acid ABC transporter, inner membrane subunit [Oscillatoria sp. PCC 6506] gi|300333826|emb|CBN58018.1| Polar amino acid ABC transporter, inner membrane subunit [Oscillatoria sp. PCC 6506] Length = 478 Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 53/158 (33%), Positives = 89/158 (56%), Gaps = 19/158 (12%) Query: 194 FVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF-GLPTLVLIALKYQLHFDKPVLG 252 F+ GIVLSLF ++S T K L L IF G P ++ + L Y F P L Sbjct: 293 FIWGIVLSLF--KIS------TIKPLSLFANGYTSIFRGTPLILQLTLVY---FATPQLT 341 Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312 +N S + ++ ++ + A+I+E +R+G+ AV +GQ EAA +LG+ ++ Sbjct: 342 GYNI---SALQAGVITFFLN----SGAYISETIRAGIQAVDKGQKEAAESLGVPYKLMMG 394 Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 ++LPQA+++I+P L ++ + LLK+S+L +G DL+ Sbjct: 395 DIILPQALKNILPALVNESIALLKDSALVSVIGVEDLL 432 >gi|222102300|ref|YP_002546890.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Agrobacterium radiobacter K84] gi|221728417|gb|ACM31426.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Agrobacterium radiobacter K84] Length = 222 Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 46/149 (30%), Positives = 82/149 (55%), Gaps = 11/149 (7%) Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301 + L+F P LG + + V I S AA+ +E VR+ +++VP Q EAA+ Sbjct: 68 FWLYFAAPFLGMQLSVWEAAV--------IGCSLTHAAYSSEYVRAAVLSVPVSQTEAAV 119 Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361 AL ++ + R V+LPQA+ +++P + ++++ LLK +S+ +G A+L +II T Sbjct: 120 ALSMSAFQRVRYVVLPQALVALLPLMGNEFVMLLKGTSIVSLIGLAELTEQAHSIIVSTY 179 Query: 362 QAIEIILIWMFIYLSLS---IMIALFMNR 387 Q + ++L + IY L+ I + +M R Sbjct: 180 QPVPVLLTVLGIYFILAQALIRLTQWMER 208 >gi|299530121|ref|ZP_07043547.1| amino acid ABC transporter, permease protein PEB1 [Comamonas testosteroni S44] gi|298721778|gb|EFI62709.1| amino acid ABC transporter, permease protein PEB1 [Comamonas testosteroni S44] Length = 266 Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 41/123 (33%), Positives = 72/123 (58%), Gaps = 2/123 (1%) Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326 ++L I LS TAA +AE+ R+G++AVPRGQ +AA +LGLT + V+ PQA+R I+P Sbjct: 142 LTLPIGLS--TAAVVAEVYRAGVLAVPRGQTDAARSLGLTEVQVFFFVVFPQALRYIVPA 199 Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386 L +Q + ++K+++ V + +L+ +I + + L+ +Y ++ I+ Sbjct: 200 LVAQLVIVVKDTTFGYVVTYGELMQNAKVLIANYHSLVPVYLVVAALYCLVNYAISKASQ 259 Query: 387 RLN 389 RL Sbjct: 260 RLG 262 >gi|241895500|ref|ZP_04782796.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Weissella paramesenteroides ATCC 33313] gi|241871246|gb|EER74997.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Weissella paramesenteroides ATCC 33313] Length = 220 Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 39/110 (35%), Positives = 60/110 (54%), Gaps = 5/110 (4%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IA + ++AF++E+ RS +AV +GQ +AA +LGL +RK R V+ PQ R IP L + Sbjct: 98 IAFTISSSAFVSEVYRSSFLAVGQGQWDAAYSLGLPYRKVVRKVIFPQVFRISIPALGNI 157 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI-----ILIWMFIYL 375 L+L K +SLA + +++ I + I IL W F +L Sbjct: 158 LLDLFKGTSLAAMITVSEMFMKAQIIAGADQDYMTIYIMIAILYWFFCWL 207 >gi|313905462|ref|ZP_07838826.1| polar amino acid ABC transporter, inner membrane subunit [Eubacterium cellulosolvens 6] gi|313469646|gb|EFR64984.1| polar amino acid ABC transporter, inner membrane subunit [Eubacterium cellulosolvens 6] Length = 218 Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 41/140 (29%), Positives = 71/140 (50%), Gaps = 8/140 (5%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G +S F++ +A + + +EI R G+ ++P GQ EA LG+T + R V+L Q Sbjct: 82 GLGLSGRFIAALVAFVINYSCYFSEIYRGGIQSIPVGQYEAGQVLGMTKGQIFREVVLLQ 141 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378 ++ I+PP++++ + L+K++SLA + A+++ G G LIW Y Sbjct: 142 VIKRIVPPMSNEIITLVKDTSLANVISVAEIIFTGNAFSKSNG------LIWPLFY--TG 193 Query: 379 IMIALFMNRLNAKIALKEKK 398 + LF L + EKK Sbjct: 194 VFYLLFSGVLTMAFSFIEKK 213 >gi|295699312|ref|YP_003607205.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia sp. CCGE1002] gi|295438525|gb|ADG17694.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. CCGE1002] Length = 216 Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 45/134 (33%), Positives = 73/134 (54%), Gaps = 1/134 (0%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G VSP ++ A+S +A++IAEI+R G +++P G +EAA LGL+ R +L+PQ Sbjct: 81 GINVSPIVAAIS-AVSLCSASYIAEILRGGFLSIPPGHLEAARMLGLSPLDTLRRILVPQ 139 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378 A R +P L ++ + L+K SSL VG A+L I T + +E + IY + Sbjct: 140 AFRLTLPSLVNEMVLLIKASSLISVVGVAELTRTAQNIAASTYRPLEAYVAAGLIYFVIC 199 Query: 379 IMIALFMNRLNAKI 392 +AL + ++ Sbjct: 200 GSLALVAHAAEHRL 213 >gi|170740014|ref|YP_001768669.1| polar amino acid ABC transporter inner membrane subunit [Methylobacterium sp. 4-46] gi|168194288|gb|ACA16235.1| polar amino acid ABC transporter, inner membrane subunit [Methylobacterium sp. 4-46] Length = 223 Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 41/123 (33%), Positives = 75/123 (60%), Gaps = 1/123 (0%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G + P+ +L +AL A+ EI+R+G+ ++ GQ+EA LGL + R V+L Sbjct: 84 GLRLDPDSAAL-LALVVNVGAYGIEIIRAGIESIDHGQIEAGRTLGLRPLQIFRYVVLKP 142 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378 A+++I P LTSQ++ L+ NSS+ A+ ++L + G I ++ ++ E+ L+ IY +LS Sbjct: 143 AIQAIYPSLTSQFILLMLNSSVCSAIAASELTAAAGDIQSRNFRSFEVYLVVTGIYFALS 202 Query: 379 IMI 381 +++ Sbjct: 203 VVL 205 >gi|209518796|ref|ZP_03267610.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. H160] gi|209500766|gb|EEA00808.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. H160] Length = 226 Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 36/121 (29%), Positives = 70/121 (57%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I S A+ +E++R + ++P+GQ EAA ++G+T +A R V+LPQA R +PPL++ Sbjct: 94 IGFSLNVGAYNSEVIRGVIESIPKGQWEAAYSMGMTRAEALRRVILPQAARVALPPLSNS 153 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 +++L+K++SLA + ++ I + T + + + +YL S +++ RL Sbjct: 154 FISLVKDTSLAAVLTVPEVFQAAQRIASVTYEPLILYTQAALVYLLFSSVLSSVQVRLEQ 213 Query: 391 K 391 + Sbjct: 214 R 214 >gi|297199263|ref|ZP_06916660.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Streptomyces sviceus ATCC 29083] gi|197716445|gb|EDY60479.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Streptomyces sviceus ATCC 29083] Length = 249 Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 42/112 (37%), Positives = 67/112 (59%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + ++L + AA+++EI RS + V GQ EA ALGL ++LPQA+R +P Sbjct: 89 FTAGCLSLVVFYAAYLSEIFRSAISGVHAGQTEAGEALGLGRAGIFGHIVLPQAVRQALP 148 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377 + ++LLK++SL V V A+L+S G I + T +A+E+ L+ IY +L Sbjct: 149 GTNTMLVDLLKSTSLLVTVSAAELMSEGRLITSATFRALEVYLVISAIYFAL 200 >gi|21910444|ref|NP_664712.1| putative amino acid ABC transporter (permease protein) [Streptococcus pyogenes MGAS315] gi|28896019|ref|NP_802369.1| amino acid ABC transporter (permease protein) [Streptococcus pyogenes SSI-1] gi|21904642|gb|AAM79515.1| putative amino acid ABC transporter (permease protein) [Streptococcus pyogenes MGAS315] gi|28811269|dbj|BAC64202.1| putative amino acid ABC transporter (permease protein) [Streptococcus pyogenes SSI-1] Length = 213 Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 33/91 (36%), Positives = 54/91 (59%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +A + AA+ AEI R G+ A+P+GQ EAA L L + R ++LPQ + ++P + ++ Sbjct: 89 LAFTLNYAAYFAEIFRGGIEAIPKGQYEAAKVLKLKPLQTIRYIILPQVFKIVLPSVFNE 148 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361 +NL+K+SSL +G DL+ T N+ Sbjct: 149 VINLVKDSSLVYVLGVGDLLLASKTATNRDA 179 >gi|86153641|ref|ZP_01071844.1| amino-acid ABC transporter integral membrane protein [Campylobacter jejuni subsp. jejuni HB93-13] gi|85842602|gb|EAQ59814.1| amino-acid ABC transporter integral membrane protein [Campylobacter jejuni subsp. jejuni HB93-13] Length = 233 Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 54/209 (25%), Positives = 106/209 (50%), Gaps = 18/209 (8%) Query: 191 VFSFVLG---IVLSLFATRLSRHFHE---KTGKALPLLYISTFLIFGLPTLVLIALKYQL 244 +FS ++G I++S F ++ + + + + PLL FL + LP K+ + Sbjct: 29 IFSLIIGLFCILMSYFKIKILENICKLYIEFSRNTPLLIQLFFLYYALP-------KFNI 81 Query: 245 HFDK-PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 H ++ P L T+ P F + LS +++AE +R+G A+ + Q EA ++L Sbjct: 82 HLEQIPPLNLICLSVEETLRPSFACAIVGLSFLGGSYMAESLRAGFEAIRKQQFEAGLSL 141 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363 G + R V+LPQA+ +P +++ + L+K +S+ + DLV++ ++ + T + Sbjct: 142 GFSKFGNLRYVILPQALAISMPSISANIIFLIKETSVVSIIALPDLVNLMKSLNSLTYKT 201 Query: 364 IEIILI----WMFIYLSLSIMIALFMNRL 388 E++ + ++ I L LS ++ F RL Sbjct: 202 DELLFLLFMGYLCIILPLSFILLKFEKRL 230 Score = 38.1 bits (87), Expect = 2.6, Method: Compositional matrix adjust. Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 4/75 (5%) Query: 82 DSSYATAILVGFVNTFWL----AFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137 D + A F+ WL +F G+I + IIG K++ IC++Y+E R Sbjct: 2 DFDFILAQAPAFLTAAWLTIKLSFFGIIFSLIIGLFCILMSYFKIKILENICKLYIEFSR 61 Query: 138 NIPPLVVIFFLYKSV 152 N P L+ +FFLY ++ Sbjct: 62 NTPLLIQLFFLYYAL 76 >gi|209543091|ref|YP_002275320.1| polar amino acid ABC transporter inner membrane subunit [Gluconacetobacter diazotrophicus PAl 5] gi|209530768|gb|ACI50705.1| polar amino acid ABC transporter, inner membrane subunit [Gluconacetobacter diazotrophicus PAl 5] Length = 243 Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 39/119 (32%), Positives = 62/119 (52%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I LS AA++AEI+R+GL AVP GQ+ AA ALG+ + + + PQA R IIPPL + Sbjct: 96 IGLSLNEAAYLAEIIRAGLNAVPPGQIAAARALGMDEWQISSRIAFPQAFRLIIPPLGNS 155 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 LLK +S+ + +L+ ++ +E+ + YL ++ R+ Sbjct: 156 VNGLLKTTSVTSVISMEELMQRSQILVQDQFMVLELFSVAALYYLFMTTAWDFLQRRIE 214 >gi|241554175|ref|YP_002979388.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240863481|gb|ACS61143.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 229 Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 39/119 (32%), Positives = 66/119 (55%) Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 AA+ AE++R L+AVP+G++EA A GL+ R + LP+A+R +P + + + LK Sbjct: 111 AAYEAEVLRGALLAVPKGELEAGRAFGLSPWMLIRRIWLPRAIRIALPTIAGEIVMQLKA 170 Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 + LA V DL +V + T E +L+ YL+L+ +IA L A++ ++ Sbjct: 171 TPLAFTVTVMDLYAVANKVRQDTLLVYEPLLVVTLFYLALTAVIARVFRGLEAQVPVRR 229 >gi|118471268|ref|YP_887851.1| ectoine/hydroxyectoine ABC transporter permease protein EhuC [Mycobacterium smegmatis str. MC2 155] gi|118172555|gb|ABK73451.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC [Mycobacterium smegmatis str. MC2 155] Length = 237 Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 39/128 (30%), Positives = 70/128 (54%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + L A+ AEIVR + + PRGQ EAA+ALG+ + R +L+PQ++ ++P + Sbjct: 90 VVLGLNEGAYAAEIVRGAIASRPRGQTEAAVALGMKPAQRMRRILVPQSIPVMLPSFGNV 149 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++LLK + L +G AD + G I +T I+L + +Y L++++A L Sbjct: 150 AVDLLKATPLVYFIGVADFTANGLAIRTETQDTTTILLTLLVVYFILALILAAITRWLEN 209 Query: 391 KIALKEKK 398 + L+ ++ Sbjct: 210 RFGLEHRR 217 >gi|57237521|ref|YP_178535.1| His/Glu/Gln/Arg/opine ABC transporter permease [Campylobacter jejuni RM1221] gi|205355341|ref|ZP_03222112.1| amino-acid ABC transporter integral membrane protein [Campylobacter jejuni subsp. jejuni CG8421] gi|57166325|gb|AAW35104.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Campylobacter jejuni RM1221] gi|205346575|gb|EDZ33207.1| amino-acid ABC transporter integral membrane protein [Campylobacter jejuni subsp. jejuni CG8421] gi|315057887|gb|ADT72216.1| Amino-acid ABC transporter integral membrane protein [Campylobacter jejuni subsp. jejuni S3] Length = 233 Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 54/209 (25%), Positives = 106/209 (50%), Gaps = 18/209 (8%) Query: 191 VFSFVLG---IVLSLFATRLSRHFHE---KTGKALPLLYISTFLIFGLPTLVLIALKYQL 244 +FS ++G I++S F ++ + + + + PLL FL + LP K+ + Sbjct: 29 IFSLIIGLFCILMSYFKIKILENICKLYIEFSRNTPLLIQLFFLYYALP-------KFNI 81 Query: 245 HFDK-PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 H ++ P L T+ P F + LS +++AE +R+G A+ + Q EA ++L Sbjct: 82 HLEQIPPLNLICLSVEETLRPSFACAIVGLSFLGGSYMAESLRAGFEAIRKQQFEAGLSL 141 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363 G + R V+LPQA+ +P +++ + L+K +S+ + DLV++ ++ + T + Sbjct: 142 GFSKFGNLRYVILPQALAISMPSISANIIFLIKETSVVSIIALPDLVNLMKSLNSLTYKT 201 Query: 364 IEIILI----WMFIYLSLSIMIALFMNRL 388 E++ + ++ I L LS ++ F RL Sbjct: 202 DELLFLLFMGYLCIILPLSFILLKFEKRL 230 Score = 37.7 bits (86), Expect = 2.9, Method: Compositional matrix adjust. Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 4/75 (5%) Query: 82 DSSYATAILVGFVNTFWL----AFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137 D + A F+ WL +F G+I + IIG K++ IC++Y+E R Sbjct: 2 DFDFILAQAPAFLTAAWLTIKLSFFGIIFSLIIGLFCILMSYFKIKILENICKLYIEFSR 61 Query: 138 NIPPLVVIFFLYKSV 152 N P L+ +FFLY ++ Sbjct: 62 NTPLLIQLFFLYYAL 76 >gi|27381501|ref|NP_773030.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] gi|27354669|dbj|BAC51655.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] Length = 222 Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 40/113 (35%), Positives = 65/113 (57%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IAL A+ EI+R G+ ++ +GQ+EA ALGL + R ++L A+R+ P LT Q Sbjct: 95 IALGVNGGAYAIEIIRGGVQSIHKGQIEAGYALGLHKGQVFRFIVLKPALRASYPSLTGQ 154 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 ++ L SS+ AV +L SV I + T ++ E+ F+YL++S ++ L Sbjct: 155 FIMLTLTSSICSAVSAYELTSVAQRIESDTFRSFEVYFSVTFLYLAISWLLML 207 Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust. Identities = 27/65 (41%), Positives = 37/65 (56%), Gaps = 6/65 (9%) Query: 88 AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRV---YVEVFRNIPPLVV 144 A+L G V T LA +GM A +IG AG + + AW+ + +VE+ RN P LV Sbjct: 16 ALLWGCVGTLGLALAGMTLAMMIGV---AGVAARDAKAAWLRALVISFVEIVRNTPFLVQ 72 Query: 145 IFFLY 149 IFFL+ Sbjct: 73 IFFLF 77 >gi|300697250|ref|YP_003747911.1| amino acid ABC transporter permease [Ralstonia solanacearum CFBP2957] gi|299073974|emb|CBJ53511.1| amino acid ABC transporter, permease protein [Ralstonia solanacearum CFBP2957] Length = 262 Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 42/113 (37%), Positives = 66/113 (58%), Gaps = 1/113 (0%) Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321 ++P F ++ I LS + AAF AE +R+G+ AVP +EAA +LG R+ V LP A+R Sbjct: 112 LAPLFWAVAI-LSLHKAAFHAEALRAGIEAVPPAMLEAAASLGFGARERLWRVQLPLALR 170 Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374 + +P L + + L+K SSLA A+ +L I Q G A+E +++ + Y Sbjct: 171 AALPSLMNNTVELVKASSLASAIAVGELTYSALMIWTQRGNALECMVLLLLFY 223 >gi|296533472|ref|ZP_06896051.1| L-cystine ABC superfamily ATP binding cassette transporter, membrane protein [Roseomonas cervicalis ATCC 49957] gi|296266198|gb|EFH12244.1| L-cystine ABC superfamily ATP binding cassette transporter, membrane protein [Roseomonas cervicalis ATCC 49957] Length = 223 Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 61/212 (28%), Positives = 95/212 (44%), Gaps = 38/212 (17%) Query: 170 FLNNR--GLSFPTL------TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTG----- 216 FLN G ++P L T+ +A V G++L+L +T R Sbjct: 8 FLNGEILGQAWPILWQGFLYTLGLSAMTVPLGLVGGVMLALLSTAGPRSIRWLAAGWTDL 67 Query: 217 -KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSC 275 +A+P L + FL GLP F +G + + I Sbjct: 68 FRAIPPLVLLVFLYAGLP------------FAGLDVGAWGAVA------------IGFFL 103 Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335 T A+ E++R+G+ +VPRGQMEAA + GL +A V+LPQA+R+++P L S L ++ Sbjct: 104 NTGAYYGEVLRAGIESVPRGQMEAARSTGLNRAQALAHVVLPQAVRNVLPDLVSNTLEVV 163 Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367 K +S+A V +L+ N T A I+ Sbjct: 164 KLTSIASVVALPELLFQARQAQNATYNATPIV 195 >gi|260881811|ref|ZP_05405274.2| L-cystine ABC transporter, permease protein [Mitsuokella multacida DSM 20544] gi|260847944|gb|EEX67951.1| L-cystine ABC transporter, permease protein [Mitsuokella multacida DSM 20544] Length = 239 Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 33/123 (26%), Positives = 66/123 (53%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I L+ +T A+++EI R+ L +VP+GQ EAA A+G+T + R V+ PQA+ +P +Q Sbjct: 110 IGLTLHTGAYLSEIFRAALDSVPQGQFEAAEAMGMTSFQMYRRVIFPQAIVFALPLFANQ 169 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 +L+ +K++S+ + ++ Q E ++ +Y + I+ +L Sbjct: 170 FLSTMKSTSIVFVITVIEVFGAAKLFCEDNSQYFEAYIVAALLYWGMGILFEYLFTKLED 229 Query: 391 KIA 393 +++ Sbjct: 230 RLS 232 >gi|54309259|ref|YP_130279.1| arginine transporter permease subunit ArtQ [Photobacterium profundum SS9] gi|46913691|emb|CAG20477.1| Putative arginine ABC transporter, permease protein [Photobacterium profundum SS9] Length = 229 Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 39/89 (43%), Positives = 59/89 (66%), Gaps = 1/89 (1%) Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321 +SP F+S IALS A++ A+ +R L AV GQ EAA ALG++ + ++LPQA+R Sbjct: 87 ISP-FVSGVIALSLIFASYAAQTIRGALKAVNNGQREAASALGISKAHSFFRIILPQAVR 145 Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 +P LT+Q+L LLK+++L +G DL+ Sbjct: 146 HALPGLTNQWLVLLKDTALVSLIGVTDLL 174 Score = 40.4 bits (93), Expect = 0.47, Method: Compositional matrix adjust. Identities = 17/67 (25%), Positives = 39/67 (58%) Query: 83 SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142 S Y+ +++ T LAF+ ++ ++ + +G +S ++LVAW +V + R +P + Sbjct: 4 SGYSMSLVEASWMTIQLAFASLLVGLVLAVIFASGEMSRSRLVAWPTTAFVTILRGLPEI 63 Query: 143 VVIFFLY 149 +V+ F++ Sbjct: 64 LVVLFIF 70 >gi|157825310|ref|YP_001493030.1| amino acid ABC transporter permease protein [Rickettsia akari str. Hartford] gi|157799268|gb|ABV74522.1| amino acid ABC transporter permease protein [Rickettsia akari str. Hartford] Length = 218 Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 47/166 (28%), Positives = 86/166 (51%), Gaps = 29/166 (17%) Query: 191 VFSFVLGIVLSLF------ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244 + V+G++L++ A RL +F+ + PLL T + F P + I +K+ + Sbjct: 31 ILGLVIGMLLAICKVNKNRALRLCANFYTSIFRGTPLLIQLTIIYFASPYI--IGVKFSV 88 Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304 FM+ IA S + A+++E++R+G+ AV +GQ EAA AL Sbjct: 89 ---------------------FMAGAIAFSLNSGAYVSEVIRAGINAVDKGQFEAAEALA 127 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 + + ++LPQA+++I P L ++ +NL+K S++ +G DL+ Sbjct: 128 IPKFLIMKDIILPQAVKNIFPSLVNELVNLIKESAIISMLGEMDLM 173 >gi|327470643|gb|EGF16099.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK330] Length = 219 Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 37/127 (29%), Positives = 76/127 (59%), Gaps = 4/127 (3%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I+ + +T+A +AEI+R GL A+ GQ EA ++ G T + R ++LPQA+R ++P + SQ Sbjct: 89 ISFTVFTSAALAEIIRGGLNAIDPGQTEAGLSQGFTQFQILRFIILPQAIRKMLPAIISQ 148 Query: 331 YLNLLKNSSLAVAV-GFADLVSVGGTIINQTGQAIEIILIWMF---IYLSLSIMIALFMN 386 ++ ++K++SL +V +L ++ + +A ++ +++ IY ++ I+ F Sbjct: 149 FVTVIKDTSLLYSVIALQELFGSAQILMGRYFEAEQVFALYLLVAAIYFLINFAISSFSR 208 Query: 387 RLNAKIA 393 +L+ + A Sbjct: 209 KLSQRWA 215 Score = 41.2 bits (95), Expect = 0.27, Method: Compositional matrix adjust. Identities = 22/61 (36%), Positives = 36/61 (59%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 IL G T ++F ++ +TI GT++ R NKL+ I +Y+E RN+P L+ IF + Sbjct: 16 ILKGLWLTLQISFISIVLSTIFGTILAVMRNGKNKLLKLIASIYIEFVRNVPNLLWIFTI 75 Query: 149 Y 149 + Sbjct: 76 F 76 >gi|325265330|ref|ZP_08132055.1| amino acid ABC transporter, permease protein [Clostridium sp. D5] gi|324029509|gb|EGB90799.1| amino acid ABC transporter, permease protein [Clostridium sp. D5] Length = 218 Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 38/132 (28%), Positives = 74/132 (56%), Gaps = 1/132 (0%) Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320 T S ++ IA + AA+ AEI R G+ ++P GQ EAA LG + ++ PQ + Sbjct: 84 TASYRLTAVLIAFAINYAAYFAEIYRGGIESMPVGQYEAAKLLGYNRVQTFFRIIFPQVI 143 Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380 + I+P +T++ + L+K++SLA A+ +A++ + I + ++ +F YL +++ Sbjct: 144 KRILPSVTNEVITLVKDTSLAFAIAYAEMFTTAKQIAASQTSIVPLVAAGIFYYL-FNLI 202 Query: 381 IALFMNRLNAKI 392 +A+ M + K+ Sbjct: 203 VAVVMEFIEKKL 214 Score = 39.7 bits (91), Expect = 0.94, Method: Compositional matrix adjust. Identities = 20/59 (33%), Positives = 35/59 (59%), Gaps = 3/59 (5%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP---PLVVIFF 147 G + T + FS ++ + +G LV GR+S K++ WI +VY+ + R P L+V++F Sbjct: 15 GMIGTIGIFFSTVLFSLPLGLLVAFGRMSRIKVIQWIAKVYISIMRGTPLMLQLMVVYF 73 >gi|320546926|ref|ZP_08041228.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus equinus ATCC 9812] gi|320448444|gb|EFW89185.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus equinus ATCC 9812] Length = 230 Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 33/89 (37%), Positives = 57/89 (64%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +A++ A I+E+ +S A+P+GQ+EA +++GLT + +LLPQA R +P + + Sbjct: 102 LAMTLLFGASISEVFKSSYQALPKGQLEAGLSIGLTEYQTFIRILLPQAFRIALPNIVTA 161 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQ 359 +NLLK+ +LA +G DL+ G II++ Sbjct: 162 IINLLKDIALAYTIGLVDLMGEGNLIISR 190 >gi|239834034|ref|ZP_04682362.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium LMG 3301] gi|239822097|gb|EEQ93666.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium LMG 3301] Length = 240 Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 44/139 (31%), Positives = 78/139 (56%), Gaps = 7/139 (5%) Query: 247 DKPVLGQFNFI------GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300 + P L Q FI G +SP +L +AL A+ EI+R+G+ ++ +GQ+EA Sbjct: 83 NTPFLVQIFFIFFGLPSAGLRLSPNSAAL-LALIVNFGAYGTEIIRAGIESIHKGQVEAG 141 Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 ALGL+ + R V++ A+R++ P LTSQ++ L+ SS+ + +L + G + + T Sbjct: 142 TALGLSRLQVFRYVIMKPALRTVYPSLTSQFIYLMLTSSVVSVISANELAAAGNDLQSAT 201 Query: 361 GQAIEIILIWMFIYLSLSI 379 + E+ ++ +YL +SI Sbjct: 202 FASFEVYIVITLMYLVMSI 220 Score = 40.4 bits (93), Expect = 0.48, Method: Compositional matrix adjust. Identities = 21/61 (34%), Positives = 34/61 (55%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +LVG T L+ + M+ I+ + G+ S K V ++ Y+E+ RN P LV IFF+ Sbjct: 34 LLVGAWQTIELSCAAMVLGLIVSIICAVGKTSGPKPVRFVIDAYIEIIRNTPFLVQIFFI 93 Query: 149 Y 149 + Sbjct: 94 F 94 >gi|227529679|ref|ZP_03959728.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus vaginalis ATCC 49540] gi|227350469|gb|EEJ40760.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus vaginalis ATCC 49540] Length = 227 Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 68/235 (28%), Positives = 111/235 (47%), Gaps = 33/235 (14%) Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVF------SFVLGIVLSLFATRLSRHFHEKTGKALP 220 F M LN P+L + +F S LGI++SL T K P Sbjct: 11 FKMSLNYVSQILPSLIQGAGLTLQIFFWTLIVSIPLGIIVSL----------GLTSKVKP 60 Query: 221 L---LYISTFLIFGLPTLV-LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 L L I +L+ G P L+ LI + Y L P++G V + + +A Sbjct: 61 LKWILEIYVWLMRGTPLLLQLIFVFYGL----PIIG--------IVFQRYDAALVAFILN 108 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 AA+ AEI R G +V GQ EAA L L + + R +++PQ ++ +IP + ++ +NL+K Sbjct: 109 YAAYFAEIFRGGFQSVSVGQYEAAKVLRLNYWQTVRKIIIPQVVKIVIPSIGNEVINLVK 168 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 +SSL +G DL+ G ++ I ++L+ + IYL L + L + ++ + Sbjct: 169 DSSLVYVIGLGDLLRAGNVATSRDVTLIPLLLVGL-IYLILVGICTLVLRQVEKR 222 >gi|197284575|ref|YP_002150447.1| arginine transporter permease subunit ArtQ [Proteus mirabilis HI4320] gi|227356757|ref|ZP_03841142.1| arginine ABC superfamily ATP binding cassette transporter, permease protein [Proteus mirabilis ATCC 29906] gi|194682062|emb|CAR41587.1| arginine ABC transporter, permease protein [Proteus mirabilis HI4320] gi|227163047|gb|EEI47982.1| arginine ABC superfamily ATP binding cassette transporter, permease protein [Proteus mirabilis ATCC 29906] Length = 234 Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 63/226 (27%), Positives = 105/226 (46%), Gaps = 18/226 (7%) Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS-TFLIFGLPTLVLIALKY- 242 T + + + ++G+VL++ T + KA L LI GLP ++++ Y Sbjct: 13 TTVTLAISALIIGLVLAMLFT----AWESAKWKAFAFLGTCWVTLIRGLPEMLVVLFVYY 68 Query: 243 ------QLHFDKPVLG----QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292 + D LG QF+F G T S F IALS A++ ++ +R L AV Sbjct: 69 GTLQGVMMLMDGIELGPFTLQFDF--GDTESLPFYCGVIALSLLYASYASQTLRGALKAV 126 Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352 P GQ EA ALG+ ++PQ R +P L +Q+L LLK+++L + DL+ Sbjct: 127 PTGQWEAGQALGMGKITIFFRFIMPQMWRHALPGLGNQWLVLLKDTALVSLISVNDLMLQ 186 Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 +I N+T + I IYL+++++ + L + E+ Sbjct: 187 TQSIANRTQEPFTWYSIVALIYLAITLVSQYILKWLEMRTTRFERS 232 >gi|331084133|ref|ZP_08333239.1| hypothetical protein HMPREF0992_02163 [Lachnospiraceae bacterium 6_1_63FAA] gi|330401988|gb|EGG81561.1| hypothetical protein HMPREF0992_02163 [Lachnospiraceae bacterium 6_1_63FAA] Length = 215 Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 29/79 (36%), Positives = 55/79 (69%) Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 AA+ AEI RSG+ A+PRGQ EAA LG + ++ ++LPQ +++++P +T++ + L+K+ Sbjct: 98 AAYFAEIYRSGIEAIPRGQYEAAAILGYSGQQTFFRIILPQMIKNVLPAVTNEVITLVKD 157 Query: 338 SSLAVAVGFADLVSVGGTI 356 +SL ++ + ++ +V I Sbjct: 158 TSLVYSLSYVEMFAVAKQI 176 >gi|190891652|ref|YP_001978194.1| putative amino acid ABC transporter, permease protein [Rhizobium etli CIAT 652] gi|190696931|gb|ACE91016.1| putative amino acid ABC transporter, permease protein [Rhizobium etli CIAT 652] Length = 375 Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 40/130 (30%), Positives = 68/130 (52%), Gaps = 3/130 (2%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I + + +A++AE VRSGL AVPR Q AA +LG++ R ++LPQA+R ++ PL Sbjct: 246 IGFTIFYSAYVAEYVRSGLQAVPRAQTAAARSLGISEFDINRSIVLPQALRVVVAPLVGN 305 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIIN--QTG-QAIEIILIWMFIYLSLSIMIALFMNR 387 L++ ++ L +G D + G I+ Q G + E++ + Y + MI + Sbjct: 306 VLDIFNSAPLVFIIGLTDFLRAGQMILANPQYGDRTFEVLSFLLVTYFLVGSMITYAARK 365 Query: 388 LNAKIALKEK 397 L +A + Sbjct: 366 LEDHMATSAR 375 >gi|190404349|ref|YP_001960980.1| rcorf5 [Agrobacterium rhizogenes] gi|158322145|gb|ABW33562.1| rcorf5 [Agrobacterium rhizogenes] Length = 255 Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 49/151 (32%), Positives = 82/151 (54%), Gaps = 12/151 (7%) Query: 217 KALPLLYISTFLI-FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSC 275 + P+L + FLI FGLP L+ + + F + I G+ V+ F A S Sbjct: 67 RGTPIL-VQLFLIYFGLPYLIGVDI-----FPSTITTPAFSISGAIVAGIF-----AFSL 115 Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335 + AA+++EI R+G+ +V +GQ EAA ALG+ A R ++LPQA+R I+P L +Q + Sbjct: 116 HEAAYMSEITRAGIRSVEKGQSEAAQALGMLPSLAMRRIILPQALRIILPSLGNQCNMMF 175 Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 K ++ + +LV V ++ +Q + E+ Sbjct: 176 KTTAFLSVIAVPELVHVADSLRSQNFKTFEV 206 >gi|331701267|ref|YP_004398226.1| polar amino acid ABC transporter inner membrane subunit [Lactobacillus buchneri NRRL B-30929] gi|329128610|gb|AEB73163.1| polar amino acid ABC transporter, inner membrane subunit [Lactobacillus buchneri NRRL B-30929] Length = 214 Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 46/182 (25%), Positives = 88/182 (48%), Gaps = 25/182 (13%) Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269 +F+ + PLL F+ +GLP + ++ +Y F FI T Sbjct: 53 NFYVWIMRGTPLLLQLIFVFYGLPIIHIVFQRYDA-------AMFAFILNYT-------- 97 Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329 A+ EI R G +VP+GQ E+A L L++ + R +++PQ + ++P + + Sbjct: 98 ---------AYFGEIFRGGFQSVPKGQFESAKVLRLSYGQTIRKIVIPQVFKIVLPSIGN 148 Query: 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 + +NL+K+SSL +G DL+ G + + +IL+ + IYL+L+ + + + + Sbjct: 149 EVINLVKDSSLVYVIGLGDLLRAGNVATARDVTLLPLILVGI-IYLALTAVCTIVLKLIE 207 Query: 390 AK 391 + Sbjct: 208 KR 209 >gi|283955889|ref|ZP_06373379.1| LOW QUALITY PROTEIN: polar amino acid transport system permease protein [Campylobacter jejuni subsp. jejuni 1336] gi|283792549|gb|EFC31328.1| LOW QUALITY PROTEIN: polar amino acid transport system permease protein [Campylobacter jejuni subsp. jejuni 1336] Length = 233 Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 54/209 (25%), Positives = 106/209 (50%), Gaps = 18/209 (8%) Query: 191 VFSFVLG---IVLSLFATRLSRHFHE---KTGKALPLLYISTFLIFGLPTLVLIALKYQL 244 +FS ++G I++S F ++ + + + + PLL FL + LP K+ + Sbjct: 29 IFSLIIGLFCILMSYFKIKILENICKLYIEFSRNTPLLIQLFFLYYALP-------KFNI 81 Query: 245 HFDK-PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 H ++ P L T+ P F + LS +++AE +R+G A+ + Q EA ++L Sbjct: 82 HLEQIPPLDLICLSVEETLRPSFACAIVGLSFLGGSYMAESLRAGFEAIRKQQFEAGLSL 141 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363 G + R V+LPQA+ +P +++ + L+K +S+ + DLV++ ++ + T + Sbjct: 142 GFSKFGNLRYVILPQALAISMPSISANIIFLIKETSVVSIIALPDLVNLMKSLNSLTYKT 201 Query: 364 IEIILI----WMFIYLSLSIMIALFMNRL 388 E++ + ++ I L LS ++ F RL Sbjct: 202 DELLFLLFMGYLCIILPLSFILLKFEKRL 230 Score = 37.7 bits (86), Expect = 3.2, Method: Compositional matrix adjust. Identities = 24/67 (35%), Positives = 36/67 (53%) Query: 86 ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145 A A L T L+F G+I + IIG K++ IC++Y+E RN P L+ + Sbjct: 10 APAFLTAAWLTIKLSFFGIIFSLIIGLFCILMSYFKIKILENICKLYIEFSRNTPLLIQL 69 Query: 146 FFLYKSV 152 FFLY ++ Sbjct: 70 FFLYYAL 76 >gi|251781978|ref|YP_002996280.1| ABC transporter permease [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|242390607|dbj|BAH81066.1| ABC transporter permease protein [Streptococcus dysgalactiae subsp. equisimilis GGS_124] Length = 148 Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 30/73 (41%), Positives = 50/73 (68%) Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 A + +T+A +AEI+R GL AV GQ EA ++ G TH + L++ PQA R ++P + SQ+ Sbjct: 20 AFTVFTSAALAEIIRGGLNAVNHGQTEAGLSQGFTHFQVFCLIIFPQAFRKMLPAIISQF 79 Query: 332 LNLLKNSSLAVAV 344 + ++K++SL +V Sbjct: 80 VTVIKDTSLLYSV 92 >gi|116670305|ref|YP_831238.1| polar amino acid ABC transporter inner membrane subunit [Arthrobacter sp. FB24] gi|116610414|gb|ABK03138.1| amino acid ABC transporter membrane protein 1, PAAT family [Arthrobacter sp. FB24] Length = 232 Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 43/127 (33%), Positives = 71/127 (55%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +AL A+ AE+VR + + +GQ EA IALG+ R +++PQ++ +++PP + Sbjct: 89 LALGLNEGAYAAEVVRGAIASRAKGQTEACIALGMEPALRLRRIIIPQSIPAMLPPFGNV 148 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++LLKN+SL V ADL I + TGQ I + + +Y +LS ++ L + L Sbjct: 149 MVDLLKNTSLVSLVTVADLTFSAQMIRSTTGQTTAIFITILVMYFALSYLLTLLTSWLEK 208 Query: 391 KIALKEK 397 + AL K Sbjct: 209 RFALDRK 215 >gi|319945076|ref|ZP_08019338.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lautropia mirabilis ATCC 51599] gi|319741646|gb|EFV94071.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lautropia mirabilis ATCC 51599] Length = 224 Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 35/119 (29%), Positives = 66/119 (55%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I S TAA+ E +R+ + + GQ EAA +LG+ R R +++PQA R+ +PPL + Sbjct: 93 IGFSLNTAAYTCETLRAAIAQIDAGQWEAAASLGMNRRHTLRRIIVPQAARTALPPLGNS 152 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 ++ L+K++SLA + +L+ I +T + + + IY +++ +++ RL Sbjct: 153 FIALVKDTSLAATIQVPELLRQSQLITARTFEVFAMYISAALIYWAIASILSALQARLE 211 >gi|227514609|ref|ZP_03944658.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus fermentum ATCC 14931] gi|227087020|gb|EEI22332.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus fermentum ATCC 14931] Length = 223 Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 54/189 (28%), Positives = 96/189 (50%), Gaps = 12/189 (6%) Query: 198 IVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ---F 254 I+ SL L + K G L + ++ G P L+++ L Y + P L + Sbjct: 26 ILASLLGVALGWLYLRKNGLLSGLARVYLGIVRGTPPLLMLLLSY---YGLPALLKGVGI 82 Query: 255 NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLV 314 N G S ++ + L + S Y +AE RS +AV +GQ+EAA+A+G+T R+A + Sbjct: 83 NIDGWSKMTFGIIGLMVGWSAY----LAEAFRSAYLAVDQGQLEAALAVGITPRRAFFRI 138 Query: 315 LLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ--AIEIILIWMF 372 ++PQA +P + + ++ L+K +SL +G D+ + + NQT ++I +I Sbjct: 139 IVPQAALIALPNIENLFIGLVKGTSLVYVLGLYDMYNEASNLSNQTNGIYQLQIFIILAL 198 Query: 373 IYLSLSIMI 381 IY + ++I Sbjct: 199 IYWAFVLLI 207 >gi|116252666|ref|YP_768504.1| transmembrane component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] gi|115257314|emb|CAK08409.1| putative transmembrane component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] Length = 220 Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 55/176 (31%), Positives = 89/176 (50%), Gaps = 30/176 (17%) Query: 190 FVFSFVLGIVLSLF------ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243 F +FV G++LSL A R + + +PLL + L FGLP + ++ Sbjct: 34 FALAFVFGLLLSLCQKSSFAALRYFAALYVTIMRGVPLLAVLFLLYFGLPGIGVV----- 88 Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 F+ G + +AL C+ AA +AE+ R+GL A+P GQ EAA+A Sbjct: 89 ----------FDAFGAAIAG-------LAL-CF-AAQVAELFRAGLKAIPAGQSEAALAA 129 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359 G T ++ ++LPQ R I+ P+ +++LLK+SSLA + +LV G ++ + Sbjct: 130 GFTPAQSFVWIILPQVARVILAPMIITFVSLLKDSSLASLITVDELVLTGRSMATE 185 >gi|157414760|ref|YP_001482016.1| amino acid ABC transporter permease [Campylobacter jejuni subsp. jejuni 81116] gi|157385724|gb|ABV52039.1| polar amino acid transport system permease protein [Campylobacter jejuni subsp. jejuni 81116] gi|315931092|gb|EFV10066.1| amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Campylobacter jejuni subsp. jejuni 327] Length = 233 Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 54/209 (25%), Positives = 106/209 (50%), Gaps = 18/209 (8%) Query: 191 VFSFVLG---IVLSLFATRLSRHFHE---KTGKALPLLYISTFLIFGLPTLVLIALKYQL 244 +FS ++G I++S F ++ + + + + PLL FL + LP K+ + Sbjct: 29 IFSLIIGLFCILMSYFKIKILENICKLYIEFSRNTPLLIQLFFLYYALP-------KFNI 81 Query: 245 HFDK-PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 H ++ P L T+ P F + LS +++AE +R+G A+ + Q EA ++L Sbjct: 82 HLEQIPPLDLICLSVEETLRPSFACAIVGLSFLGGSYMAESLRAGFEAIRKQQFEAGLSL 141 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363 G + R V+LPQA+ +P +++ + L+K +S+ + DLV++ ++ + T + Sbjct: 142 GFSKFGNLRYVILPQALAISMPSISANIIFLIKETSVVSIIALPDLVNLMKSLNSLTYKT 201 Query: 364 IEIILI----WMFIYLSLSIMIALFMNRL 388 E++ + ++ I L LS ++ F RL Sbjct: 202 DELLFLLFMGYLCIILPLSFILLKFEKRL 230 Score = 37.7 bits (86), Expect = 3.2, Method: Compositional matrix adjust. Identities = 24/67 (35%), Positives = 36/67 (53%) Query: 86 ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145 A A L T L+F G+I + IIG K++ IC++Y+E RN P L+ + Sbjct: 10 APAFLTAAWLTIKLSFFGIIFSLIIGLFCILMSYFKIKILENICKLYIEFSRNTPLLIQL 69 Query: 146 FFLYKSV 152 FFLY ++ Sbjct: 70 FFLYYAL 76 >gi|89901104|ref|YP_523575.1| amino acid ABC transporter permease [Rhodoferax ferrireducens T118] gi|89345841|gb|ABD70044.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Rhodoferax ferrireducens T118] Length = 367 Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 29/89 (32%), Positives = 56/89 (62%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + ++ + AA+ AE++R GL A+P+GQ+EAA LGL++ + R ++LPQA+ ++P + + Sbjct: 236 VGITLFAAAYSAEVIRGGLQAIPKGQVEAAATLGLSYWQTQRKIVLPQALAMVVPGIMNN 295 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQ 359 +++ K++SL V +L +N Sbjct: 296 FISTFKDTSLVTIVSLYELTGAMSLALNS 324 >gi|88596920|ref|ZP_01100156.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Campylobacter jejuni subsp. jejuni 84-25] gi|218562122|ref|YP_002343901.1| amino-acid ABC transporter integral membrane protein [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|88190609|gb|EAQ94582.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Campylobacter jejuni subsp. jejuni 84-25] gi|112359828|emb|CAL34615.1| amino-acid ABC transporter integral membrane protein [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|284925734|gb|ADC28086.1| amino-acid ABC transporter integral membrane protein [Campylobacter jejuni subsp. jejuni IA3902] gi|315928204|gb|EFV07521.1| amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Campylobacter jejuni subsp. jejuni DFVF1099] gi|315929759|gb|EFV08929.1| amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Campylobacter jejuni subsp. jejuni 305] Length = 233 Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 54/209 (25%), Positives = 106/209 (50%), Gaps = 18/209 (8%) Query: 191 VFSFVLG---IVLSLFATRLSRHFHE---KTGKALPLLYISTFLIFGLPTLVLIALKYQL 244 +FS ++G I++S F ++ + + + + PLL FL + LP K+ + Sbjct: 29 IFSLIIGLFCILMSYFKIKILENICKLYIEFSRNTPLLIQLFFLYYALP-------KFNI 81 Query: 245 HFDK-PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 H ++ P L T+ P F + LS +++AE +R+G A+ + Q EA ++L Sbjct: 82 HLEQIPPLDLICLSVEETLRPSFACAIVGLSFLGGSYMAESLRAGFEAIRKQQFEAGLSL 141 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363 G + R V+LPQA+ +P +++ + L+K +S+ + DLV++ ++ + T + Sbjct: 142 GFSKFGNLRYVILPQALAISMPSISANIIFLIKETSVVSIIALPDLVNLMKSLNSLTYKT 201 Query: 364 IEIILI----WMFIYLSLSIMIALFMNRL 388 E++ + ++ I L LS ++ F RL Sbjct: 202 DELLFLLFMGYLCIILPLSFILLKFEKRL 230 Score = 38.1 bits (87), Expect = 2.6, Method: Compositional matrix adjust. Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 4/75 (5%) Query: 82 DSSYATAILVGFVNTFWL----AFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137 D + A F+ WL +F G+I + IIG K++ IC++Y+E R Sbjct: 2 DFDFILAQAPAFLTAAWLTIKLSFFGIIFSLIIGLFCILMSYFKIKILENICKLYIEFSR 61 Query: 138 NIPPLVVIFFLYKSV 152 N P L+ +FFLY ++ Sbjct: 62 NTPLLIQLFFLYYAL 76 >gi|319899108|ref|YP_004159201.1| Glutamate/aspartate transport system permease protein gltK [Bartonella clarridgeiae 73] gi|319403072|emb|CBI76627.1| Glutamate/aspartate transport system permease protein gltK [Bartonella clarridgeiae 73] Length = 178 Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 31/90 (34%), Positives = 60/90 (66%), Gaps = 1/90 (1%) Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315 FI G+++ S I + + AA+ AEI+R+G++++ +GQ +A ALG+T+ + R+V+ Sbjct: 39 FITGTSIGAN-KSALITFTAFEAAYFAEIMRAGILSISQGQKQAGQALGMTYWQNMRIVI 97 Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345 LPQA R+++P +Q + L ++++L A+ Sbjct: 98 LPQAFRNMLPVFLTQIIILFQDTTLVYAIS 127 >gi|297198908|ref|ZP_06916305.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces sviceus ATCC 29083] gi|197711171|gb|EDY55205.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces sviceus ATCC 29083] Length = 296 Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 51/182 (28%), Positives = 96/182 (52%), Gaps = 22/182 (12%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 + LPL+ ++ G+P AL+ Q PVL +GG+ AL+ Sbjct: 133 RGLPLIINLMIVVLGVP-----ALRLQGVTVDPVL-----LGGT-----------ALTLT 171 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 +A++AE+ R+G+ +V Q AA +LGL++R+A R V+LPQA+R +PPL + ++L K Sbjct: 172 YSAYVAEVFRAGIESVHPSQRAAARSLGLSNRQALRYVVLPQAVRRQVPPLLNDLVSLQK 231 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 ++ L G D V I+ ++ I+ + ++++L+I + F + + A++ + Sbjct: 232 DTGLVSIGGAIDAVRAADIIVGRSLNYTPYIVAGL-VFVALTIPMTRFTDWVTARMDRRR 290 Query: 397 KK 398 + Sbjct: 291 AQ 292 >gi|24114552|ref|NP_709062.1| putative transport system permease protein [Shigella flexneri 2a str. 301] gi|24053745|gb|AAN44769.1| putative transport system permease protein [Shigella flexneri 2a str. 301] Length = 163 Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 35/116 (30%), Positives = 62/116 (53%) Query: 30 QIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAI 89 QI+ + + I W N N+ ++ G FL AGF I Q ++ Y +Y Sbjct: 31 QILAVVAVVGIVGWLFQNTVTNLNNRGITSGFAFLDRGAGFGIVQHLIDYQQGDTYGRVF 90 Query: 90 LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145 +VG +NT ++ ++ A+++G +G RLS N L+ + +Y+E+FRNI L+++ Sbjct: 91 IVGLLNTLLVSALCIVFASVLGFFIGLARLSDNWLLRKLSTIYIEIFRNIANLLLV 146 >gi|328956045|ref|YP_004373378.1| amino acid ABC transporter membrane protein, PAAT family [Coriobacterium glomerans PW2] gi|328456369|gb|AEB07563.1| amino acid ABC transporter membrane protein, PAAT family [Coriobacterium glomerans PW2] Length = 421 Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 39/117 (33%), Positives = 70/117 (59%), Gaps = 1/117 (0%) Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 + A++ EI R+G+ ++ GQ EAA +LG+T + V++PQ R++IP LT++++ L K Sbjct: 283 SGAYLCEIFRAGIASIDIGQGEAARSLGMTRSQTMVDVIVPQMFRAVIPNLTNEFILLYK 342 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393 ++SL AVG +LV TI+ TG I+ F YL +++ ++ L +++ Sbjct: 343 DTSLLAAVGTMELVMYAKTIVANTGSITPYIVAAAF-YLVITLPLSKITRHLERRVS 398 >gi|315639957|ref|ZP_07895087.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus italicus DSM 15952] gi|315484282|gb|EFU74748.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus italicus DSM 15952] Length = 223 Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 67/220 (30%), Positives = 108/220 (49%), Gaps = 31/220 (14%) Query: 179 PTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTG-KALPLLYISTFLIFGLPTLVL 237 PT M + +F F+ ++G+V++L L R E G LYIS F G+PTLV Sbjct: 20 PTTLMLSIISMF-FAVIIGLVIAL----LKRS--EIPGLTQFATLYISLFR--GMPTLVQ 70 Query: 238 IALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY------IALSCYTAAFIAEIVRSGLIA 291 + + Y G + PE +L I S ++++AEI R+ L + Sbjct: 71 LFIIYY--------------GLPQIFPEMSNLQASQAAIIGFSLKESSYLAEIFRAALGS 116 Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 V +GQMEA +A+G+ K ++LPQA + +P + +++L+K SSLA +G +L + Sbjct: 117 VDKGQMEAGLAVGMKKVKIYTRIILPQAAVNALPATGNTFISLIKESSLAFTLGITELFA 176 Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 G + + + E L+ +Y L I+I F RL K Sbjct: 177 EGKMLAAASLRFFETYLVVGLVYWGL-IIIYSFFQRLVEK 215 >gi|257056915|ref|YP_003134747.1| amino acid ABC transporter membrane protein [Saccharomonospora viridis DSM 43017] gi|256586787|gb|ACU97920.1| amino acid ABC transporter membrane protein [Saccharomonospora viridis DSM 43017] Length = 219 Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 40/134 (29%), Positives = 74/134 (55%), Gaps = 1/134 (0%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G T+SP + + L + A + A++ R+G+ AVP+GQ EA++AL L R V+LPQ Sbjct: 83 GITLSPMVAGV-LGLGVHYACYCADVYRAGIEAVPKGQWEASLALQLPAHITWRRVVLPQ 141 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378 A+R+++P L + + + K + + +L+ TI T + +E + + I+L+ S Sbjct: 142 AVRNVLPALGNYAIAMFKETPFLALITVPELLRTARTIGGDTYEYLEPLTLAGLIFLAAS 201 Query: 379 IMIALFMNRLNAKI 392 AL + +L ++ Sbjct: 202 YPTALLLRKLENRM 215 >gi|260587478|ref|ZP_05853391.1| polar amino acid uptake family ABC transporter, permease protein [Blautia hansenii DSM 20583] gi|260541743|gb|EEX22312.1| polar amino acid uptake family ABC transporter, permease protein [Blautia hansenii DSM 20583] Length = 215 Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 29/79 (36%), Positives = 55/79 (69%) Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 AA+ AEI RSG+ A+PRGQ EAA LG + ++ ++LPQ +++++P +T++ + L+K+ Sbjct: 98 AAYFAEIYRSGIEAIPRGQYEAAAILGYSGQQTFFRIILPQMIKNVLPTVTNEVITLVKD 157 Query: 338 SSLAVAVGFADLVSVGGTI 356 +SL ++ + ++ +V I Sbjct: 158 TSLVYSLSYVEMFAVAKQI 176 >gi|242309233|ref|ZP_04808388.1| polar amino acid ABC transporter [Helicobacter pullorum MIT 98-5489] gi|239524274|gb|EEQ64140.1| polar amino acid ABC transporter [Helicobacter pullorum MIT 98-5489] Length = 217 Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 37/128 (28%), Positives = 69/128 (53%), Gaps = 5/128 (3%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + S + A + ++VR + ++PR Q E+ ALGL+ + ++LPQ+ R ++PPL + Sbjct: 90 LVFSLWGIAEMGDLVRGAISSLPRHQSESGRALGLSEMQIQIFIILPQSFRRLLPPLVNL 149 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF-----IYLSLSIMIALFM 385 + ++K +SLA +G +D++ VG II + W++ +Y L ++LF Sbjct: 150 FTRMIKTTSLAALIGVSDMLKVGQQIIEVNLISYPQASFWVYGGIFALYFMLCYPLSLFS 209 Query: 386 NRLNAKIA 393 L K+A Sbjct: 210 QHLERKLA 217 Score = 39.7 bits (91), Expect = 0.92, Method: Compositional matrix adjust. Identities = 23/68 (33%), Positives = 37/68 (54%) Query: 82 DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141 D+ +L G + TF +AF + + I G ++G NK++ +ICR Y+E R IP Sbjct: 6 DTQNIVRLLQGVLVTFQIAFIAIFFSCIFGFVLGYLMTLPNKILNFICRFYLETIRIIPI 65 Query: 142 LVVIFFLY 149 L +F +Y Sbjct: 66 LAWLFIVY 73 >gi|163759019|ref|ZP_02166105.1| ABC amino acid transporter, inner membrane subunit [Hoeflea phototrophica DFL-43] gi|162283423|gb|EDQ33708.1| ABC amino acid transporter, inner membrane subunit [Hoeflea phototrophica DFL-43] Length = 225 Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 50/170 (29%), Positives = 81/170 (47%), Gaps = 26/170 (15%) Query: 209 RHF---HEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265 RHF + + + PL+ F FGLP LV A + H Sbjct: 55 RHFATAYVEVIRNTPLIVQLFFFAFGLPLLVGYAWPFWAH-------------------- 94 Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 +AL+ + + +EI+R+G AVP GQ+EAA+ALG+ R V+ PQA+ ++ Sbjct: 95 ---ALLALTINFSGYFSEILRAGYAAVPAGQVEAAMALGVKKLTLFRKVIFPQAVAAMYS 151 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375 L SQ++ L + + +G DL S G I ++T ++ E+ + IY+ Sbjct: 152 SLNSQFIFLFLTTGVIAEIGVTDLTSAGLFIDSRTFRSFEVFITLTVIYI 201 >gi|126730763|ref|ZP_01746573.1| ABC-type amino acid transport system, permease component [Sagittula stellata E-37] gi|126708929|gb|EBA07985.1| ABC-type amino acid transport system, permease component [Sagittula stellata E-37] Length = 221 Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 40/121 (33%), Positives = 65/121 (53%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I L ++ +E+VR +++VPR Q E A+AL L+ ++ R V+LPQA+ S+IPP+ + Sbjct: 89 IVLGLNVGSYGSEVVRGAILSVPRDQTEGAVALNLSRFQSMRYVILPQALVSMIPPMGNL 148 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++LLK + L + ADL + QT I I + +Y LS +A + A Sbjct: 149 AIDLLKITPLVSLITIADLTFQAQVVRQQTNDTILIYGFVLVVYFILSSAVAHVFTKAGA 208 Query: 391 K 391 Sbjct: 209 H 209 >gi|282854428|ref|ZP_06263765.1| conserved hypothetical protein [Propionibacterium acnes J139] gi|282583881|gb|EFB89261.1| conserved hypothetical protein [Propionibacterium acnes J139] Length = 216 Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 55/170 (32%), Positives = 82/170 (48%), Gaps = 7/170 (4%) Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269 H H + P Y F +GL ++ L ++ F P QF I V + Sbjct: 4 HGHTSSCSEKPR-YTPVF--WGLLAVLYPTLPIEVPFGGP---QFASIETEQVVTTLATT 57 Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329 I L A++ EI RSGL +V GQ EAA LG+ R V++PQ MR II PL + Sbjct: 58 IIGLDLNENAYLTEITRSGLESVDVGQTEAAKTLGMKPSLIMRRVIIPQPMRVIILPLGN 117 Query: 330 QYLNLLKNSSLAVAVGFA-DLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378 + + +LK +SL +AV F DL + N+ I ++++ F YL ++ Sbjct: 118 ETIGMLKTTSLVLAVPFTLDLQYATSAMANRIYAPIPLLVVTAFWYLVMT 167 >gi|297587192|ref|ZP_06945837.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Finegoldia magna ATCC 53516] gi|297575173|gb|EFH93892.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Finegoldia magna ATCC 53516] Length = 526 Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 39/120 (32%), Positives = 72/120 (60%), Gaps = 1/120 (0%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G ++P +L+I +S T A+++E+VR G+ +V GQMEA ALG+TH ++ V+LPQ Sbjct: 376 GIDMAPISAALFI-VSVNTGAYLSEVVRGGINSVDVGQMEACKALGMTHGQSMINVILPQ 434 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378 A+++I+P + ++++ +K++S+ + +L V +I T E + IY L+ Sbjct: 435 AIKNILPSIGNEFVINIKDTSVLNVISVTELFFVSKSIAGSTYNIFETYAVTCVIYFVLT 494 >gi|256391966|ref|YP_003113530.1| polar amino acid ABC transporter inner membrane subunit [Catenulispora acidiphila DSM 44928] gi|256358192|gb|ACU71689.1| polar amino acid ABC transporter, inner membrane subunit [Catenulispora acidiphila DSM 44928] Length = 258 Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 41/118 (34%), Positives = 71/118 (60%), Gaps = 8/118 (6%) Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290 G+PTL+LI + + F P L + G+ P + + +AL+ A+++E+ R+GL Sbjct: 96 GVPTLLLILV---VGFGIPALQ----LSGTPKDPVVLGV-VALTLSYVAYVSEVFRAGLD 147 Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348 +V Q AA ALGL+ R+ R V+LPQA+R+++PPL + + L K+++L +G + Sbjct: 148 SVHPSQRAAATALGLSERQTLRFVVLPQAIRNVVPPLLNDFSALQKDTALVSTLGVVE 205 >gi|256380866|ref|YP_003104526.1| polar amino acid ABC transporter, inner membrane subunit [Actinosynnema mirum DSM 43827] gi|255925169|gb|ACU40680.1| polar amino acid ABC transporter, inner membrane subunit [Actinosynnema mirum DSM 43827] Length = 286 Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 48/144 (33%), Positives = 77/144 (53%), Gaps = 10/144 (6%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 +AL Y+ F GLP ++L+ Y + F P L +GG P + IAL Sbjct: 115 RALATGYVDLFR--GLPLIILL---YLVGFGLPAL----RLGGVPTDPVVLG-GIALVLT 164 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 +A++AE+ R+G+ ++ Q+ AA +LGL HR+ RLV+LPQA+R + P L + ++ L K Sbjct: 165 YSAYVAEVFRAGIESIHPSQIAAARSLGLDHRRTLRLVVLPQAVRRVTPALLNDFVALQK 224 Query: 337 NSSLAVAVGFADLVSVGGTIINQT 360 + L +G D V + +T Sbjct: 225 DCGLISVLGAVDAVRAAQIVQAKT 248 >gi|227543804|ref|ZP_03973853.1| ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus reuteri CF48-3A] gi|300908873|ref|ZP_07126336.1| glutamate ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus reuteri SD2112] gi|68160832|gb|AAY86862.1| lr1198 [Lactobacillus reuteri] gi|227186181|gb|EEI66252.1| ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus reuteri CF48-3A] gi|300894280|gb|EFK87638.1| glutamate ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus reuteri SD2112] Length = 487 Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 52/181 (28%), Positives = 91/181 (50%), Gaps = 23/181 (12%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF---GLPTLVLIALKYQLHFD 247 +F+ + G++L + ++ + +S+ LI+ G+P +VL Y Sbjct: 302 IFAMIFGVILGVLGIAQNKFANA----------VSSTLIYIFRGIPMIVLAFFIY----- 346 Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307 +G N IG P F++ + L+ A+I IV+ G +V GQ EAA +LGL + Sbjct: 347 ---MGIPNVIGHKV--PLFLAGILTLTFNEGAYIGAIVKGGFESVNIGQWEAARSLGLPY 401 Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367 KA V+ PQ + +IP L +Q++ LK++S+ A+G +L G II+Q + ++ Sbjct: 402 SKALIKVIAPQGFKLMIPSLVNQFIITLKDTSILSAIGVMELTQTGTVIISQNMEGFKMW 461 Query: 368 L 368 L Sbjct: 462 L 462 Score = 37.4 bits (85), Expect = 4.2, Method: Compositional matrix adjust. Identities = 34/124 (27%), Positives = 58/124 (46%), Gaps = 20/124 (16%) Query: 51 NME-KSNLSLGIGFLSERAGFEIDQGIVPYT-SDSSYAT----------------AILVG 92 N+E + ++ GI +L + ++DQ I YT SD + A+L G Sbjct: 232 NLELQKKMNDGIKWLKDTG--QMDQIIDKYTKSDKTTKDSATDRTILGLIRANYPALLRG 289 Query: 93 FVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSV 152 T L G+I A I G ++G ++ NK + + +FR IP +V+ FF+Y + Sbjct: 290 LWMTIELTVVGIIFAMIFGVILGVLGIAQNKFANAVSSTLIYIFRGIPMIVLAFFIYMGI 349 Query: 153 LSVL 156 +V+ Sbjct: 350 PNVI 353 >gi|322411895|gb|EFY02803.1| Amino acid ABC transporter, permease protein [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957] Length = 213 Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 33/91 (36%), Positives = 54/91 (59%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +A + AA+ AEI R G+ A+P+GQ EAA L L + R ++LPQ + ++P + ++ Sbjct: 89 LAFTLNYAAYFAEIFRGGIEAIPKGQYEAAKVLKLKPLQTIRYIILPQVFKIVLPSVFNE 148 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361 +NL+K+SSL +G DL+ T N+ Sbjct: 149 VINLVKDSSLVYVLGVGDLLLASKTAANRDA 179 >gi|283832471|ref|ZP_06352212.1| arginine ABC transporter, permease protein ArtQ [Citrobacter youngae ATCC 29220] gi|291072130|gb|EFE10239.1| arginine ABC transporter, permease protein ArtQ [Citrobacter youngae ATCC 29220] Length = 238 Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 56/187 (29%), Positives = 98/187 (52%), Gaps = 10/187 (5%) Query: 217 KALPLLYISTFLIFGLPTLVL-IALKYQLHF---DKPVLGQF-NFIGGSTVSPEFMSLYI 271 + LP + + F+ FG L+L +A + ++ D PV Q NF VSP F+ I Sbjct: 55 RGLPEILVVLFIYFGSSQLLLTLADGFTINLGFVDIPVQMQIENF----DVSP-FLCGVI 109 Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 ALS AA+ ++ +R L AVP GQ E+ ALGL+ +++PQ R +P L +Q+ Sbjct: 110 ALSLLYAAYASQTLRGALKAVPLGQWESGQALGLSKAAIFFRLVMPQMWRHALPGLGNQW 169 Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 L LLK+++L + DL+ +I +T + ++ IYL ++++ + R++ + Sbjct: 170 LVLLKDTALVSLISVNDLMLQTKSIATRTQEPFTWYIVAAAIYLVITLVSQYILKRIDLR 229 Query: 392 IALKEKK 398 E++ Sbjct: 230 ATRFERR 236 >gi|264678002|ref|YP_003277909.1| amino acid ABC transporter permease PEB1 [Comamonas testosteroni CNB-2] gi|262208515|gb|ACY32613.1| amino acid ABC transporter, permease protein PEB1 [Comamonas testosteroni CNB-2] Length = 266 Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 41/123 (33%), Positives = 72/123 (58%), Gaps = 2/123 (1%) Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326 ++L I LS TAA +AE+ R+G++AVPRGQ +AA +LGLT + V+ PQA+R I+P Sbjct: 142 LTLPIGLS--TAAVVAEVYRAGVLAVPRGQTDAARSLGLTEVQVFFFVVFPQALRYIVPA 199 Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386 L +Q + ++K+++ V + +L+ +I + + L+ +Y ++ I+ Sbjct: 200 LVAQLVIVVKDTTFGYVVTYGELMQNAKVLIANYHSLVPVYLVVAALYCLVNYAISKASQ 259 Query: 387 RLN 389 RL Sbjct: 260 RLG 262 >gi|291296961|ref|YP_003508359.1| polar amino acid ABC transporter inner membrane subunit [Meiothermus ruber DSM 1279] gi|290471920|gb|ADD29339.1| polar amino acid ABC transporter, inner membrane subunit [Meiothermus ruber DSM 1279] Length = 367 Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 50/161 (31%), Positives = 89/161 (55%), Gaps = 17/161 (10%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL---IFGLPTLVLIALKYQLHFD 247 VFS + G+V+++ ++ K + P+ +I+TF LP++++I Y + F Sbjct: 170 VFSLIWGLVVAI-----AKLLPGKPAQ--PIRFIATFYTDAFLSLPSIIVI---YLIGFG 219 Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307 P+ G IG P +AL+ A++AE+ R+GL ++ Q AA +LGL++ Sbjct: 220 LPLTG----IGFFRNLPLEALAVLALTLTYGAYMAEVYRAGLESIHPSQWAAARSLGLSY 275 Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348 + R V++PQA+R IIPPL + ++ + K+++L VG D Sbjct: 276 GQTLRFVVVPQAVRRIIPPLLNNFIGMQKDTALVNVVGVID 316 >gi|225574974|ref|ZP_03783584.1| hypothetical protein RUMHYD_03053 [Blautia hydrogenotrophica DSM 10507] gi|225037821|gb|EEG48067.1| hypothetical protein RUMHYD_03053 [Blautia hydrogenotrophica DSM 10507] Length = 220 Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 39/143 (27%), Positives = 82/143 (57%), Gaps = 2/143 (1%) Query: 252 GQFNFIGGS-TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 G + F G S T +++ I S AA+ AEI R G+ ++P GQ EAA LG + Sbjct: 76 GPYFFFGISITQGYSMIAVLIGFSLNYAAYFAEIYRGGIESMPVGQYEAAQILGYKKSQT 135 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370 ++LPQ ++ I+P +T++ + L+K++SLA + A++ ++ I + + ++ Sbjct: 136 FVHIILPQVIKRILPAVTNEVITLVKDTSLAFVLAVAEMFTIAKQIASSQTTMMPFVIAA 195 Query: 371 MFIYLSLSIMIALFMNRLNAKIA 393 +F Y+ ++++A+ M+++ +++ Sbjct: 196 VFYYV-FNLLVAVVMDKIEKRLS 217 >gi|168487564|ref|ZP_02712072.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae CDC1087-00] gi|183569640|gb|EDT90168.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae CDC1087-00] Length = 213 Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 48/161 (29%), Positives = 77/161 (47%), Gaps = 20/161 (12%) Query: 228 LIFGLPTLVLIALKYQLHFD---------------KPVLGQFNFIGGSTVS-----PEFM 267 L+F +P VLIA Q+H+ P+L Q FI S Sbjct: 26 LLFSIPLGVLIAFTLQVHWKPLHYLINIYIWVMRGTPLLLQLIFIYYVLPSIGIRLDRLP 85 Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327 + IA AA+ AEI R G+ +PRGQ EAA L + R ++LPQ + ++P + Sbjct: 86 AAIIAFVLNYAAYFAEIFRGGIDTIPRGQYEAAKVLKFSPFDRVRYIILPQVTKIVLPSV 145 Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368 ++ ++L+K++SL A+G +DL+ T N+ + + L Sbjct: 146 FNEVMSLVKDTSLVYALGISDLILASRTAANRDASLVPMFL 186 >gi|160933930|ref|ZP_02081317.1| hypothetical protein CLOLEP_02792 [Clostridium leptum DSM 753] gi|156866603|gb|EDO59975.1| hypothetical protein CLOLEP_02792 [Clostridium leptum DSM 753] Length = 213 Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 30/82 (36%), Positives = 53/82 (64%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +A + AA+ AEI R G+ ++P GQ EAA LG ++ ++LPQ ++ IIPP+ ++ Sbjct: 89 VAFALNYAAYFAEIYRGGIESIPDGQYEAAKVLGFNKKQTFFRIILPQVVKRIIPPMGNE 148 Query: 331 YLNLLKNSSLAVAVGFADLVSV 352 ++ L+K++SLA + +L+ V Sbjct: 149 FITLVKDTSLAQVIAVVELLKV 170 Score = 37.0 bits (84), Expect = 6.2, Method: Compositional matrix adjust. Identities = 19/63 (30%), Positives = 37/63 (58%) Query: 87 TAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIF 146 T +L G + T + FS ++ A +G LV GR+S K++ W R+++ + R P ++ + Sbjct: 8 TEMLQGTLMTLRIFFSTLVFALPLGLLVSLGRMSKIKIINWPVRLFILIMRGTPLMLQLL 67 Query: 147 FLY 149 F++ Sbjct: 68 FVF 70 >gi|94987161|ref|YP_595094.1| ABC-type amino acid transport system, permease component [Lawsonia intracellularis PHE/MN1-00] gi|94731410|emb|CAJ54773.1| ABC-type amino acid transport system, permease component [Lawsonia intracellularis PHE/MN1-00] Length = 228 Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 38/129 (29%), Positives = 70/129 (54%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 +++ I + T A+ +E +R L+++ +GQ++AA ALG T KA +++PQA R +P Sbjct: 89 YIAAVIGFTLCTGAYQSEYIRGALLSIKKGQLQAAYALGFTRLKAILFIIIPQATRYALP 148 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 ++ + L+K SSLA + +L +++QT + +EI I YLS + + Sbjct: 149 GCGNELVYLIKYSSLAYLITCIELTGEAKILVSQTVKPMEIYFIAAIYYLSFVSIATWIL 208 Query: 386 NRLNAKIAL 394 +L A+ Sbjct: 209 KKLETLYAI 217 >gi|329942893|ref|ZP_08291672.1| amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Chlamydophila psittaci Cal10] gi|313848065|emb|CBY17063.1| ABC transporter, membrane permease [Chlamydophila psittaci RD1] gi|325507119|gb|ADZ18757.1| amino ABC transporter, permease protein [Chlamydophila psittaci 6BC] gi|328815153|gb|EGF85142.1| amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Chlamydophila psittaci Cal10] gi|328914734|gb|AEB55567.1| amino acid ABC transporter, permease protein [Chlamydophila psittaci 6BC] Length = 215 Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 53/183 (28%), Positives = 96/183 (52%), Gaps = 15/183 (8%) Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGST 261 + T SR+F + + L LY++ +I G P + I + Y F P + + + Sbjct: 35 IIGTMTSRYFPCRITRWLGNLYVT--VIRGTPLFIQILIFY---FGLPSIIRLD------ 83 Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321 M+ IALS ++A++AE +R G+ A+ GQ E+A LG + ++ PQ + Sbjct: 84 -PTPLMAGLIALSINSSAYLAENIRGGINALSVGQWESAKVLGYKKSQIFFYIIYPQVFK 142 Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 +I+P LT++++ L+K SS+ + VG +L V I+++ +E+ I +YL +M Sbjct: 143 NILPSLTNEFVALIKESSILMVVGVPELTKVSKDIVSRELNPMEMYSICAALYL---LMT 199 Query: 382 ALF 384 +LF Sbjct: 200 SLF 202 >gi|295398059|ref|ZP_06808114.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Aerococcus viridans ATCC 11563] gi|294973708|gb|EFG49480.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Aerococcus viridans ATCC 11563] Length = 247 Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 41/129 (31%), Positives = 72/129 (55%) Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328 +YI TAAF +EI RS + +V Q EAA ++GLT + R ++LPQA+R IP Sbjct: 96 VYITYGLNTAAFFSEIFRSAISSVATDQKEAAASVGLTKLQTYRRIILPQAVRIAIPATG 155 Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388 + ++LL+++SLA ++G D++ + T +++E + I++ LSI++ L Sbjct: 156 TMIVSLLQDTSLAFSLGVIDVIGKVRALAALTYRSLEGYFVAAIIFIVLSIVLERVFAWL 215 Query: 389 NAKIALKEK 397 + + K Sbjct: 216 TKRFQFQSK 224 >gi|312196903|ref|YP_004016964.1| polar amino acid ABC transporter inner membrane protein [Frankia sp. EuI1c] gi|311228239|gb|ADP81094.1| polar amino acid ABC transporter, inner membrane subunit [Frankia sp. EuI1c] Length = 317 Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 46/134 (34%), Positives = 74/134 (55%), Gaps = 21/134 (15%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 + LP++ + FGLP AL+ Q PV+ +GG IAL+ Sbjct: 154 RGLPVILGLYLVGFGLP-----ALRLQGTPRDPVV-----LGG-----------IALTLT 192 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 A++AE++R+G+ +V Q+ AA +LGL++ K R V+LPQA+R ++PPL + ++L K Sbjct: 193 YTAYVAEVIRAGIESVHPSQVAAARSLGLSYAKTMRFVVLPQALRRVVPPLLNDAISLQK 252 Query: 337 NSSLAVAVGFADLV 350 +S L +G D V Sbjct: 253 DSGLVSVLGVVDAV 266 >gi|297567185|ref|YP_003686157.1| polar amino acid ABC transporter inner membrane subunit [Meiothermus silvanus DSM 9946] gi|296851634|gb|ADH64649.1| polar amino acid ABC transporter, inner membrane subunit [Meiothermus silvanus DSM 9946] Length = 364 Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 53/164 (32%), Positives = 90/164 (54%), Gaps = 23/164 (14%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLL---YISTFLIFGLPTLV---LIALKYQL 244 VF V G+V+++ +R + G + L Y F GLPT++ LIAL L Sbjct: 169 VFILVWGLVIAV-----ARMVPGRAGSPIRFLATVYTDAFR--GLPTIISIYLIALGLPL 221 Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304 + P++ + PE++++ +AL+ A++AE+ R+GL ++ Q AA +LG Sbjct: 222 A-NVPLVRDW--------PPEWLAV-LALTVSYGAYVAEVYRAGLDSIHPSQWAAARSLG 271 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348 L+ + R V++PQA+R IIPPL + ++ L K+++L VG D Sbjct: 272 LSFSQTLRFVIIPQAVRRIIPPLLNDFIALQKDTALVNVVGVID 315 >gi|256847114|ref|ZP_05552560.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Lactobacillus coleohominis 101-4-CHN] gi|256715778|gb|EEU30753.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Lactobacillus coleohominis 101-4-CHN] Length = 225 Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 53/180 (29%), Positives = 90/180 (50%), Gaps = 27/180 (15%) Query: 222 LYISTFLIFGLPTLVLIALKY-----QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 LY+ F I +PT+VL+ L Y Q D P +M++ +A + + Sbjct: 60 LYLEFFRI--VPTIVLLFLVYYILPRQFKIDLPA--------------TWMAV-LAFALW 102 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 AA ++IVR L +VP+ Q E+ +ALGL+ + R VLLPQA + +P + ++K Sbjct: 103 VAAEFSDIVRGALESVPKHQRESGLALGLSSCQLFRYVLLPQAFQLELPVTINLATRVIK 162 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF-----IYLSLSIMIALFMNRLNAK 391 +SL + + D+++VG II Q + W++ +Y + ++L+ RL AK Sbjct: 163 TTSLLMTISIMDVINVGQQIIEANNQTHPTGVFWVYGLIFILYFVVDYPLSLWAKRLTAK 222 >gi|170702188|ref|ZP_02893094.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria IOP40-10] gi|170132897|gb|EDT01319.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria IOP40-10] Length = 241 Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 35/96 (36%), Positives = 58/96 (60%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P ++ AL+ A++A V +G++A GQ +A ++LGLT + R VLLPQA+R + Sbjct: 94 PGLATVVCALALIGGAYLAHAVHAGIVAAGDGQWQAGLSLGLTRWQTVRYVLLPQAIRIM 153 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359 P +Q++ L+K++SLA VG +L V + N+ Sbjct: 154 TPSFVNQWVALVKDTSLAYIVGVPELSFVATQVNNR 189 >gi|15901349|ref|NP_345953.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae TIGR4] gi|111657054|ref|ZP_01407850.1| hypothetical protein SpneT_02001719 [Streptococcus pneumoniae TIGR4] gi|116516529|ref|YP_816792.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae D39] gi|148984846|ref|ZP_01818099.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP3-BS71] gi|148988547|ref|ZP_01819980.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP6-BS73] gi|148992613|ref|ZP_01822281.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP9-BS68] gi|148997437|ref|ZP_01825042.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP11-BS70] gi|149003284|ref|ZP_01828180.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP14-BS69] gi|149008125|ref|ZP_01831656.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP18-BS74] gi|149011737|ref|ZP_01832933.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP19-BS75] gi|149021769|ref|ZP_01835776.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP23-BS72] gi|168483888|ref|ZP_02708840.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae CDC1873-00] gi|168489663|ref|ZP_02713862.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP195] gi|168492572|ref|ZP_02716715.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae CDC0288-04] gi|168493402|ref|ZP_02717545.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae CDC3059-06] gi|168575958|ref|ZP_02721873.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae MLV-016] gi|169832498|ref|YP_001694909.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae Hungary19A-6] gi|194398715|ref|YP_002038132.1| ABC transporter permease [Streptococcus pneumoniae G54] gi|221232215|ref|YP_002511368.1| putative amino acid ABC transporter permease protein [Streptococcus pneumoniae ATCC 700669] gi|225854945|ref|YP_002736457.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae JJA] gi|225857128|ref|YP_002738639.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae P1031] gi|225859260|ref|YP_002740770.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae 70585] gi|225861336|ref|YP_002742845.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae Taiwan19F-14] gi|237649208|ref|ZP_04523460.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae CCRI 1974] gi|237821817|ref|ZP_04597662.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae CCRI 1974M2] gi|298230582|ref|ZP_06964263.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae str. Canada MDR_19F] gi|298255877|ref|ZP_06979463.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae str. Canada MDR_19A] gi|298503238|ref|YP_003725178.1| amino acid ABC superfamily transporter permease [Streptococcus pneumoniae TCH8431/19A] gi|303254159|ref|ZP_07340272.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae BS455] gi|303260725|ref|ZP_07346685.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP-BS293] gi|303263052|ref|ZP_07348984.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP14-BS292] gi|303264456|ref|ZP_07350376.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae BS397] gi|303267434|ref|ZP_07353288.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae BS457] gi|303269791|ref|ZP_07355540.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae BS458] gi|307068147|ref|YP_003877113.1| amino acid ABC transporter permease [Streptococcus pneumoniae AP200] gi|307126931|ref|YP_003878962.1| amino acid ABC transporter permeae [Streptococcus pneumoniae 670-6B] gi|14972991|gb|AAK75593.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae TIGR4] gi|116077105|gb|ABJ54825.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae D39] gi|147756492|gb|EDK63533.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP11-BS70] gi|147758744|gb|EDK65741.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP14-BS69] gi|147760431|gb|EDK67409.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP18-BS74] gi|147764168|gb|EDK71100.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP19-BS75] gi|147922868|gb|EDK73984.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP3-BS71] gi|147925748|gb|EDK76823.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP6-BS73] gi|147928630|gb|EDK79644.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP9-BS68] gi|147930005|gb|EDK80992.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP23-BS72] gi|168995000|gb|ACA35612.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae Hungary19A-6] gi|172042766|gb|EDT50812.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae CDC1873-00] gi|183571981|gb|EDT92509.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP195] gi|183573305|gb|EDT93833.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae CDC0288-04] gi|183576655|gb|EDT97183.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae CDC3059-06] gi|183578303|gb|EDT98831.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae MLV-016] gi|194358382|gb|ACF56830.1| ABC transporter, permease protein [Streptococcus pneumoniae G54] gi|220674676|emb|CAR69249.1| putative amino acid ABC transporter permease protein [Streptococcus pneumoniae ATCC 700669] gi|225720386|gb|ACO16240.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae 70585] gi|225723987|gb|ACO19840.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae JJA] gi|225726193|gb|ACO22045.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae P1031] gi|225727461|gb|ACO23312.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae Taiwan19F-14] gi|298238833|gb|ADI69964.1| amino acid ABC superfamily ATP binding cassette transporter permease [Streptococcus pneumoniae TCH8431/19A] gi|301794515|emb|CBW36957.1| putative amino acid ABC transporter permease protein [Streptococcus pneumoniae INV104] gi|301800339|emb|CBW32968.1| putative amino acid ABC transporter permease protein [Streptococcus pneumoniae OXC141] gi|301802223|emb|CBW34973.1| putative amino acid ABC transporter permease protein [Streptococcus pneumoniae INV200] gi|302598885|gb|EFL65918.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae BS455] gi|302635815|gb|EFL66318.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP14-BS292] gi|302638128|gb|EFL68603.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP-BS293] gi|302640684|gb|EFL71082.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae BS458] gi|302643025|gb|EFL73318.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae BS457] gi|302646268|gb|EFL76495.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae BS397] gi|306409684|gb|ADM85111.1| ABC-type amino acid transport system, permease component [Streptococcus pneumoniae AP200] gi|306483993|gb|ADM90862.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae 670-6B] gi|327389686|gb|EGE88031.1| amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Streptococcus pneumoniae GA04375] gi|332072294|gb|EGI82777.1| amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Streptococcus pneumoniae GA17570] gi|332073837|gb|EGI84315.1| amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Streptococcus pneumoniae GA41301] gi|332074251|gb|EGI84728.1| amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Streptococcus pneumoniae GA17545] Length = 213 Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 48/161 (29%), Positives = 77/161 (47%), Gaps = 20/161 (12%) Query: 228 LIFGLPTLVLIALKYQLHFD---------------KPVLGQFNFIGGSTVS-----PEFM 267 L+F +P VLIA Q+H+ P+L Q FI S Sbjct: 26 LLFSIPLGVLIAFALQVHWKPLHYLINIYIWVMRGTPLLLQLIFIYYVLPSIGIRLDRLP 85 Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327 + IA AA+ AEI R G+ +PRGQ EAA L + R ++LPQ + ++P + Sbjct: 86 AAIIAFVLNYAAYFAEIFRGGIDTIPRGQYEAAKVLKFSPFDRVRYIILPQVTKIVLPSV 145 Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368 ++ ++L+K++SL A+G +DL+ T N+ + + L Sbjct: 146 FNEVMSLVKDTSLVYALGISDLILASRTAANRDASLVPMFL 186 >gi|313648491|gb|EFS12933.1| general L-amino acid transport system permease aapQ domain protein [Shigella flexneri 2a str. 2457T] Length = 157 Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 35/116 (30%), Positives = 62/116 (53%) Query: 30 QIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAI 89 QI+ + + I W N N+ ++ G FL AGF I Q ++ Y +Y Sbjct: 25 QILAVVAVVGIVGWLFQNTVTNLNNRGITSGFAFLDRGAGFGIVQHLIDYQQGDTYGRVF 84 Query: 90 LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145 +VG +NT ++ ++ A+++G +G RLS N L+ + +Y+E+FRNI L+++ Sbjct: 85 IVGLLNTLLVSALCIVFASVLGFFIGLARLSDNWLLRKLSTIYIEIFRNIANLLLV 140 >gi|148543337|ref|YP_001270707.1| polar amino acid ABC transporter, inner membrane subunit [Lactobacillus reuteri DSM 20016] gi|184152747|ref|YP_001841088.1| glutamine ABC transporter substrate binding and permease components [Lactobacillus reuteri JCM 1112] gi|227364409|ref|ZP_03848499.1| glutamate ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus reuteri MM2-3] gi|325683609|ref|ZP_08163125.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus reuteri MM4-1A] gi|148530371|gb|ABQ82370.1| amino acid ABC transporter membrane protein, PAAT family / amino acid ABC transporter substrate-binding protein, PAAT family [Lactobacillus reuteri DSM 20016] gi|183224091|dbj|BAG24608.1| glutamine ABC transporter substrate binding and permease components [Lactobacillus reuteri JCM 1112] gi|227070502|gb|EEI08835.1| glutamate ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus reuteri MM2-3] gi|324977959|gb|EGC14910.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus reuteri MM4-1A] Length = 487 Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 52/181 (28%), Positives = 91/181 (50%), Gaps = 23/181 (12%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF---GLPTLVLIALKYQLHFD 247 +F+ + G++L + ++ + +S+ LI+ G+P +VL Y Sbjct: 302 IFAMIFGVILGVLGIAQNKFANA----------VSSTLIYIFRGIPMIVLAFFIY----- 346 Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307 +G N IG P F++ + L+ A+I IV+ G +V GQ EAA +LGL + Sbjct: 347 ---MGIPNVIGHKV--PLFLAGILTLTFNEGAYIGAIVKGGFESVNIGQWEAARSLGLPY 401 Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367 KA V+ PQ + +IP L +Q++ LK++S+ A+G +L G II+Q + ++ Sbjct: 402 SKALIKVIAPQGFKLMIPSLVNQFIITLKDTSILSAIGVMELTQTGTVIISQNMEGFKMW 461 Query: 368 L 368 L Sbjct: 462 L 462 Score = 37.0 bits (84), Expect = 6.0, Method: Compositional matrix adjust. Identities = 34/125 (27%), Positives = 58/125 (46%), Gaps = 20/125 (16%) Query: 50 NNME-KSNLSLGIGFLSERAGFEIDQGIVPYT-SDSSYAT----------------AILV 91 N+E + ++ GI +L + ++DQ I YT SD + A+L Sbjct: 231 KNLELQKKMNDGIKWLKDTG--QMDQIIDKYTKSDKTTKGSATDRTILGLIRANYPALLR 288 Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151 G T L G+I A I G ++G ++ NK + + +FR IP +V+ FF+Y Sbjct: 289 GLWMTIELTVVGIIFAMIFGVILGVLGIAQNKFANAVSSTLIYIFRGIPMIVLAFFIYMG 348 Query: 152 VLSVL 156 + +V+ Sbjct: 349 IPNVI 353 >gi|327461006|gb|EGF07339.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK1057] Length = 219 Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 37/127 (29%), Positives = 76/127 (59%), Gaps = 4/127 (3%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I+ + +T+A +AEI+R GL A+ GQ EA ++ G T + R ++LPQA+R ++P + SQ Sbjct: 89 ISFTVFTSAALAEIIRGGLNAIDSGQTEAGLSQGFTQFQILRYIILPQAIRKMLPAIISQ 148 Query: 331 YLNLLKNSSLAVAV-GFADLVSVGGTIINQTGQAIEIILIWMF---IYLSLSIMIALFMN 386 ++ ++K++SL +V +L ++ + +A ++ +++ IY ++ I+ F Sbjct: 149 FVTVIKDTSLLYSVIALQELFGSAQILMGRYFEAEQVFALYLLVAAIYFLINFAISSFSR 208 Query: 387 RLNAKIA 393 +L+ + A Sbjct: 209 KLSQRWA 215 Score = 41.6 bits (96), Expect = 0.23, Method: Compositional matrix adjust. Identities = 22/61 (36%), Positives = 36/61 (59%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 IL G T ++F ++ +TI GT++ R NKL+ I +Y+E RN+P L+ IF + Sbjct: 16 ILKGLWLTLQISFISIVLSTIFGTILAVMRNGKNKLLKLIASIYIEFVRNVPNLLWIFTI 75 Query: 149 Y 149 + Sbjct: 76 F 76 >gi|319794876|ref|YP_004156516.1| polar amino acid ABC transporter, inner membrane subunit [Variovorax paradoxus EPS] gi|315597339|gb|ADU38405.1| polar amino acid ABC transporter, inner membrane subunit [Variovorax paradoxus EPS] Length = 220 Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 46/155 (29%), Positives = 82/155 (52%), Gaps = 7/155 (4%) Query: 243 QLHFDKPVLGQFNFI------GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296 +L + P + Q FI G +SPE S+ IA+ A+ EI+R+G+ A P+GQ Sbjct: 62 ELIRNTPFIVQLFFIFFGLPAAGVKLSPEVASV-IAMVMNLGAYSTEIIRAGIEATPKGQ 120 Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356 +EAA++L L+ + V+LP A++ + P + SQ + ++ S++ + +L I Sbjct: 121 IEAAVSLALSKSQVFLRVVLPPALKKVWPSMVSQIIIVMLGSAVCGQISTEELSYAANLI 180 Query: 357 INQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 ++ +A E +I IYL+LS+ + +N K Sbjct: 181 QSRNFRAFEAFIIATLIYLALSVALRRLLNWAGPK 215 >gi|295835694|ref|ZP_06822627.1| glutamate permease [Streptomyces sp. SPB74] gi|197698112|gb|EDY45045.1| glutamate permease [Streptomyces sp. SPB74] Length = 298 Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 40/131 (30%), Positives = 74/131 (56%), Gaps = 1/131 (0%) Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327 +L L+ Y + +AE+ RSG+ +V RGQ EAA ALG+ + +L+PQA+R+++P + Sbjct: 143 ALVTGLTLYNGSVLAEVFRSGIASVDRGQREAAYALGMRKTQVMAYILIPQAVRAMLPSI 202 Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387 SQ + LK++SL + + + + G I + + I + M I L I + + ++ Sbjct: 203 ISQLVVALKDTSLGYLITYEEFLHAGKLIASNLDYDLPFIPVVMVI-APLYIGMCMVLSW 261 Query: 388 LNAKIALKEKK 398 L +A +E++ Sbjct: 262 LAHLLARRERR 272 Score = 38.1 bits (87), Expect = 2.6, Method: Compositional matrix adjust. Identities = 20/44 (45%), Positives = 28/44 (63%), Gaps = 1/44 (2%) Query: 116 AGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIP 159 GRLS ++ V W VE FR +P LV+IFF++ + L V P+P Sbjct: 100 VGRLSEHRPVRWPATALVEFFRAMPVLVMIFFVFIA-LKVQPLP 142 >gi|197295418|ref|YP_002153959.1| putative binding-protein-dependent transport system protein [Burkholderia cenocepacia J2315] gi|195944897|emb|CAR57506.1| putative binding-protein-dependent transport system component [Burkholderia cenocepacia J2315] Length = 216 Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 39/128 (30%), Positives = 70/128 (54%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P +++ L+ +T+A++AEI R + AVP+GQ EA+ +L +++ + R V+LPQA R Sbjct: 84 PPWVAATAGLTFFTSAYLAEIWRGCVEAVPKGQWEASASLAMSYVEQLRHVILPQAARIA 143 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 I P + +K+++L +GF +L VG I N T + + + IY +L + Sbjct: 144 IAPTVGFGVQAVKDTALVSIIGFTELTKVGIAISNATFRPFVVYGLVALIYFALCYPLTR 203 Query: 384 FMNRLNAK 391 + L + Sbjct: 204 YARTLQRR 211 >gi|187780000|ref|ZP_02996473.1| hypothetical protein CLOSPO_03596 [Clostridium sporogenes ATCC 15579] gi|187773625|gb|EDU37427.1| hypothetical protein CLOSPO_03596 [Clostridium sporogenes ATCC 15579] Length = 215 Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 33/113 (29%), Positives = 65/113 (57%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + + LS A+ AEI+R G+I+V +GQ EA ALG + + ++LPQ + IIP Sbjct: 86 FSAAILGLSLNAGAYTAEIIRGGIISVDKGQFEACRALGFNYFHTMKKIVLPQTFKIIIP 145 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378 L ++++ +LK++SL + +++ + + T + +E ++ +YL ++ Sbjct: 146 SLGNEFITMLKDTSLVSTIAMVEVMRSAQLLYSSTFKPMETFILTAVLYLIMT 198 >gi|68535731|ref|YP_250436.1| glutamate ABC transport system, permease protein [Corynebacterium jeikeium K411] gi|260578184|ref|ZP_05846104.1| glutamate transport system permease protein GluC [Corynebacterium jeikeium ATCC 43734] gi|68263330|emb|CAI36818.1| glutamate ABC transport system, permease protein [Corynebacterium jeikeium K411] gi|258603723|gb|EEW16980.1| glutamate transport system permease protein GluC [Corynebacterium jeikeium ATCC 43734] Length = 228 Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 34/78 (43%), Positives = 51/78 (65%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +A YT+ F+AE +RSG+ VP GQ EAA +LGL+ + R V+ PQA+R I PL + Sbjct: 102 LAFVAYTSCFVAESLRSGINTVPFGQAEAARSLGLSFGQNFRHVIFPQALRGAIVPLGNT 161 Query: 331 YLNLLKNSSLAVAVGFAD 348 + L KN+++A +G A+ Sbjct: 162 LIALTKNTTIASVIGVAE 179 >gi|296110805|ref|YP_003621186.1| amino acid ABC transporter, permease protein [Leuconostoc kimchii IMSNU 11154] gi|295832336|gb|ADG40217.1| amino acid ABC transporter, permease protein [Leuconostoc kimchii IMSNU 11154] Length = 237 Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 37/126 (29%), Positives = 68/126 (53%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + I S A+ +E VR+ L +VP+ Q EAA LGL+ R+ ++ PQA+R +P Sbjct: 96 FPAAVITFSLNVGAYASETVRAALDSVPQAQWEAAATLGLSRRQTIFEIIFPQAIRIALP 155 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PL+++++ L+K++SLA + ++ ++ I + Q + + I IY S ++ Sbjct: 156 PLSNEFIGLVKDTSLASTITIVEMFAITQQITAKNYQPLLMYSIVAVIYAFFSTILVFLQ 215 Query: 386 NRLNAK 391 L + Sbjct: 216 KYLEKR 221 >gi|224282756|ref|ZP_03646078.1| permease protein of ABC transporter for glutamate [Bifidobacterium bifidum NCIMB 41171] gi|313139916|ref|ZP_07802109.1| permease protein of ABC transporter for glutamate [Bifidobacterium bifidum NCIMB 41171] gi|313132426|gb|EFR50043.1| permease protein of ABC transporter for glutamate [Bifidobacterium bifidum NCIMB 41171] Length = 362 Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 35/98 (35%), Positives = 63/98 (64%), Gaps = 2/98 (2%) Query: 254 FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313 F F G S SP + ++ +AL Y + +AE+VRSG+ +P GQ EA++ALGLT ++ Sbjct: 134 FAFAGLS--SPSYWAVVLALVLYNGSVVAELVRSGVGNLPNGQREASLALGLTETQSLMQ 191 Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 + +PQA+ +++P +Q + +LK+++L + + DL+ Sbjct: 192 IEVPQAVYAMLPAAVTQLVVVLKDTALGSIIMYTDLLQ 229 >gi|221197901|ref|ZP_03570947.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia multivorans CGD2M] gi|221204541|ref|ZP_03577558.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia multivorans CGD2] gi|221175398|gb|EEE07828.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia multivorans CGD2] gi|221181833|gb|EEE14234.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia multivorans CGD2M] Length = 250 Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 49/143 (34%), Positives = 78/143 (54%), Gaps = 12/143 (8%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 +AL L +I F +P L+LI + +F P+L T P S+ AL+ Sbjct: 59 RALLLAFIGFFR--AIPVLMLI---FWTYFLMPILLH-------TDVPGLASVVCALALV 106 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 A++A V +G++A GQ +A ++LGLT + R VLLPQA+R + P +Q++ L+K Sbjct: 107 GGAYLAHAVHAGIVAAGAGQWQAGLSLGLTRWQTVRHVLLPQAVRIMTPSFVNQWVALVK 166 Query: 337 NSSLAVAVGFADLVSVGGTIINQ 359 ++SLA VG +L V + N+ Sbjct: 167 DTSLAYIVGVPELSFVATQVNNR 189 >gi|167828955|ref|ZP_02460426.1| amino acid ABC transporter, ATP-binding/permease protein [Burkholderia pseudomallei 9] Length = 300 Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 47/141 (33%), Positives = 81/141 (57%), Gaps = 6/141 (4%) Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH-RKATRLVLLPQAM 320 +SP F + + L+ AAF AE +R G+++V +GQ+EAA ALGL R+ATR+V LPQAM Sbjct: 149 ISP-FCAAVLGLTLNHAAFAAEGIRGGILSVDQGQLEAAAALGLPRARQATRIV-LPQAM 206 Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL---IWMFIYLSL 377 R+ +P + + L K SS+ + +L I + + I +++ +W I L++ Sbjct: 207 RAFLPVAFNDLIALAKGSSMVYVLAMPELFYTVQVIYRRNLEVIPLLMVATVWYLIILTV 266 Query: 378 SIMIALFMNRLNAKIALKEKK 398 ++ + R A+ A++E + Sbjct: 267 LSIVQAQVERRYARGAVREPE 287 >gi|229824368|ref|ZP_04450437.1| hypothetical protein GCWU000282_01689 [Catonella morbi ATCC 51271] gi|229786168|gb|EEP22282.1| hypothetical protein GCWU000282_01689 [Catonella morbi ATCC 51271] Length = 535 Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 35/123 (28%), Positives = 69/123 (56%) Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329 ++ +S T A+IAE+VR G+ A+ +GQ EAA A+G+ H + + V++PQ R+I+P + + Sbjct: 390 FLVVSINTGAYIAEVVRGGIYAIDKGQFEAARAIGMNHWQTMKEVVMPQVFRTILPSVGN 449 Query: 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 +++ +K++S+ + ++L TI + E + IY L+ I + + Sbjct: 450 EFVINVKDTSVLNVISVSELYFTTKTIAGNNFRYFETFFVTAVIYFILTFTITSLLRAIE 509 Query: 390 AKI 392 +I Sbjct: 510 KRI 512 >gi|146319722|ref|YP_001199434.1| ABC-type amino acid transport system, permease component [Streptococcus suis 05ZYH33] gi|146321918|ref|YP_001201629.1| ABC-type amino acid transport system, permease component [Streptococcus suis 98HAH33] gi|253752712|ref|YP_003025853.1| putative amino-acid ABC transporter permease protein [Streptococcus suis SC84] gi|253754538|ref|YP_003027679.1| amino-acid ABC transporter permease protein [Streptococcus suis P1/7] gi|253756471|ref|YP_003029611.1| amino-acid ABC transporter permease protein [Streptococcus suis BM407] gi|145690528|gb|ABP91034.1| ABC-type amino acid transport system, permease component [Streptococcus suis 05ZYH33] gi|145692724|gb|ABP93229.1| ABC-type amino acid transport system, permease component [Streptococcus suis 98HAH33] gi|251817001|emb|CAZ52650.1| putative amino-acid ABC transporter permease protein [Streptococcus suis SC84] gi|251818935|emb|CAZ56778.1| putative amino-acid ABC transporter permease protein [Streptococcus suis BM407] gi|251820784|emb|CAR47546.1| putative amino-acid ABC transporter permease protein [Streptococcus suis P1/7] gi|292559333|gb|ADE32334.1| Amino acid ABC transporter, permease protein [Streptococcus suis GZ1] gi|319759128|gb|ADV71070.1| ABC-type amino acid transport system, permease component [Streptococcus suis JS14] Length = 219 Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 52/186 (27%), Positives = 95/186 (51%), Gaps = 18/186 (9%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 + SF G+++++ T L + K + YI +++ G P LV + Y + F P Sbjct: 29 ILSFTFGLLIAI-GTALVQIAQIPILKQVARFYI--WVVRGTPLLVQL---YVIFFGLPS 82 Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 LG V F S + S T A+ AE +R+ + +VP+GQ+EA ++G++ + Sbjct: 83 LG--------IVLDAFPSAVLVFSVNTGAYAAETIRASIESVPKGQLEAGYSVGMSFAQT 134 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA----IEI 366 R ++LPQA R PPL++ + L+K++SLA + ++ I +T + E+ Sbjct: 135 MRRIILPQAFRVAFPPLSNTLIGLVKDTSLAANITVLEMFMATQQIAARTYEPFALYCEV 194 Query: 367 ILIWMF 372 L+++F Sbjct: 195 ALVYLF 200 >gi|134102704|ref|YP_001108365.1| putative amino acid ABC transporter permease protein [Saccharopolyspora erythraea NRRL 2338] gi|291007839|ref|ZP_06565812.1| putative amino acid ABC transporter permease protein [Saccharopolyspora erythraea NRRL 2338] gi|133915327|emb|CAM05440.1| putative amino acid ABC transporter permease protein [Saccharopolyspora erythraea NRRL 2338] Length = 235 Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 52/165 (31%), Positives = 83/165 (50%), Gaps = 14/165 (8%) Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFN 255 LG+V + FA L+R + + + +YI F +I L + + P LG Sbjct: 27 LGLVFA-FAAGLARGARSRVLRGIGFVYIEFFR-----GAAVIVLAFWFVYALPSLGW-- 78 Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315 + P + + +ALS A+ AE+VR + AVP+ Q+EAA AL +T + R V+ Sbjct: 79 -----QLEPLWAGI-LALSLNIGAYGAEVVRGAIRAVPQAQVEAATALNMTGWQRMRRVV 132 Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 LPQA +++PP T+ + LLK S++ V +L G + N T Sbjct: 133 LPQAFVAMVPPFTNNLIELLKASAVVSVVSIPELTLQGQLVRNGT 177 >gi|152985671|ref|YP_001349968.1| arginine/ornithine transport protein AotM [Pseudomonas aeruginosa PA7] gi|150960829|gb|ABR82854.1| arginine/ornithine transport protein AotM [Pseudomonas aeruginosa PA7] Length = 232 Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 49/167 (29%), Positives = 85/167 (50%), Gaps = 11/167 (6%) Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF----MSLYIALSCYTA 278 ++ T++I G P LV + L Y L QF+ + S + P +A + T+ Sbjct: 56 WLYTYVIRGTPMLVQLFLIYY------GLAQFDAVRESALWPWLSNASFCACLAFAINTS 109 Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338 A+ AEI+ L A P G++EAA A+G++ + R +LLP A+R +P +++ + +L+ + Sbjct: 110 AYTAEILAGSLKATPHGEIEAAKAMGMSRLQMYRRILLPSALRRALPQYSNEVIMMLQTT 169 Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS-IMIALF 384 SLA V D+ + +Q E + YL L+ I++ LF Sbjct: 170 SLASIVTLVDITGAARNVYSQYYLPFEAFITAGLFYLCLTFILVRLF 216 >gi|194467496|ref|ZP_03073483.1| polar amino acid ABC transporter, inner membrane subunit [Lactobacillus reuteri 100-23] gi|194454532|gb|EDX43429.1| polar amino acid ABC transporter, inner membrane subunit [Lactobacillus reuteri 100-23] Length = 487 Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 52/181 (28%), Positives = 91/181 (50%), Gaps = 23/181 (12%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF---GLPTLVLIALKYQLHFD 247 +F+ + G++L + ++ + +S+ LI+ G+P +VL Y Sbjct: 302 IFAMIFGVILGVLGIAQNKFANA----------VSSTLIYIFRGIPMIVLAFFIY----- 346 Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307 +G N IG P F++ + L+ A+I IV+ G +V GQ EAA +LGL + Sbjct: 347 ---MGIPNVIGHKV--PLFLAGILTLTFNEGAYIGAIVKGGFESVNIGQWEAARSLGLPY 401 Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367 KA V+ PQ + +IP L +Q++ LK++S+ A+G +L G II+Q + ++ Sbjct: 402 SKALIKVIAPQGFKLMIPSLVNQFIITLKDTSILSAIGVMELTQTGTVIISQNMEGFKMW 461 Query: 368 L 368 L Sbjct: 462 L 462 Score = 37.4 bits (85), Expect = 4.5, Method: Compositional matrix adjust. Identities = 34/124 (27%), Positives = 58/124 (46%), Gaps = 20/124 (16%) Query: 51 NME-KSNLSLGIGFLSERAGFEIDQGIVPYT-SDSSYAT----------------AILVG 92 N+E + ++ GI +L + ++DQ I YT SD + A+L G Sbjct: 232 NLELQKKMNDGIKWLKDTG--QMDQIIDKYTKSDKTTKDSATDRTILGLIRANYPALLRG 289 Query: 93 FVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSV 152 T L G+I A I G ++G ++ NK + + +FR IP +V+ FF+Y + Sbjct: 290 LWMTIELTVVGIIFAMIFGVILGVLGIAQNKFANAVSSTLIYIFRGIPMIVLAFFIYMGI 349 Query: 153 LSVL 156 +V+ Sbjct: 350 PNVI 353 >gi|94988718|ref|YP_596819.1| histidine transport system permease protein [Streptococcus pyogenes MGAS9429] gi|94992541|ref|YP_600640.1| histidine transport system permease protein hisM [Streptococcus pyogenes MGAS2096] gi|94542226|gb|ABF32275.1| histidine transport system permease protein [Streptococcus pyogenes MGAS9429] gi|94546049|gb|ABF36096.1| Histidine transport system permease protein hisM [Streptococcus pyogenes MGAS2096] Length = 213 Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 33/91 (36%), Positives = 54/91 (59%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +A + AA+ AEI R G+ A+P+GQ EAA L L + R ++LPQ + ++P + ++ Sbjct: 89 LAFTLNYAAYFAEIFRGGIEAIPKGQYEAAKVLKLKPLQTIRYIILPQVFKIVLPSVFNE 148 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361 +NL+K+SSL +G DL+ T N+ Sbjct: 149 VINLVKDSSLVYVLGVGDLLLASKTAANRDA 179 >gi|148253984|ref|YP_001238569.1| ABC transporter ATP-binding protein [Bradyrhizobium sp. BTAi1] gi|146406157|gb|ABQ34663.1| amino acid ABC transporter membrane protein, PAAT family / amino acid ABC transporter ATP-binding protein, PAAT family [Bradyrhizobium sp. BTAi1] Length = 598 Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 46/145 (31%), Positives = 78/145 (53%), Gaps = 4/145 (2%) Query: 254 FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313 F++ +SP F + + L+ AAF AEI+R G+++V GQ EAA ALGL + T Sbjct: 158 FSYSTTQLISP-FAAAVLGLALNQAAFAAEIIRGGILSVDHGQYEAAAALGLPRSRQTFR 216 Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL---IW 370 ++LPQAMRSI+P + + L K +S + +L I ++ + I +++ +W Sbjct: 217 IILPQAMRSILPGAFNDIIGLAKGTSNVYILALPELFYTVQVIFHRNLEVIPLLMVATVW 276 Query: 371 MFIYLSLSIMIALFMNRLNAKIALK 395 I L++ + + R A+ AL+ Sbjct: 277 YLIILTVLSALQFQVERHFARGALR 301 >gi|330812509|ref|YP_004356971.1| putative ABC transporter, permease component [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327380617|gb|AEA71967.1| putative ABC transporter, permease component [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 216 Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 35/104 (33%), Positives = 62/104 (59%), Gaps = 1/104 (0%) Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316 + G +SP +M+ IAL+ +T+A++AEI R + ++ GQ EA+ +L L + R V+L Sbjct: 78 LAGVEISP-WMAAAIALTLFTSAYLAEIWRGCVDSISHGQWEASASLALNPLEQLRYVIL 136 Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 PQA+R + P + ++K +++ +GF +L GG + N T Sbjct: 137 PQALRIAVAPTVGFSVQVVKGTAVTSIIGFTELTKTGGMLANAT 180 >gi|310287214|ref|YP_003938472.1| Glutamate transport system permease protein GluD [Bifidobacterium bifidum S17] gi|311064074|ref|YP_003970799.1| glutamate transport system permease GluD [Bifidobacterium bifidum PRL2010] gi|309251150|gb|ADO52898.1| Glutamate transport system permease protein GluD [Bifidobacterium bifidum S17] gi|310866393|gb|ADP35762.1| GluD Glutamate transport system permease protein [Bifidobacterium bifidum PRL2010] Length = 362 Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 35/98 (35%), Positives = 63/98 (64%), Gaps = 2/98 (2%) Query: 254 FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313 F F G S SP + ++ +AL Y + +AE+VRSG+ +P GQ EA++ALGLT ++ Sbjct: 134 FAFAGLS--SPSYWAVVLALVLYNGSVVAELVRSGVGNLPNGQREASLALGLTETQSLMQ 191 Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 + +PQA+ +++P +Q + +LK+++L + + DL+ Sbjct: 192 IEVPQAVYAMLPAAVTQLVVVLKDTALGSIIMYTDLLQ 229 >gi|307701964|ref|ZP_07638972.1| amino acid ABC transporter, permease protein [Streptococcus mitis NCTC 12261] gi|307616609|gb|EFN95798.1| amino acid ABC transporter, permease protein [Streptococcus mitis NCTC 12261] Length = 213 Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 54/198 (27%), Positives = 96/198 (48%), Gaps = 23/198 (11%) Query: 215 TGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF----IGGSTVSPEFMSLY 270 +G ++ L + LIF +P VLIA Q+H+ KP+ N + G+ + + + +Y Sbjct: 13 SGASMTLQVFALVLIFSIPLGVLIAFALQVHW-KPLHHLINIYIWIMRGTPLLLQLIFIY 71 Query: 271 -----------------IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313 IA AA+ AEI R G+ +P GQ EAA L + R Sbjct: 72 YVLPSIGIRLDRLPAAIIAFVLNYAAYFAEIFRGGIDTIPNGQYEAAKVLKFSPFATVRY 131 Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI 373 ++LPQ + ++P + ++ ++L+K++SL A+G +DL+ T N+ + + L I Sbjct: 132 IILPQVTKIVLPSVFNEVMSLVKDTSLVYALGISDLILASRTAANRDASLVPMFLAGA-I 190 Query: 374 YLSLSIMIALFMNRLNAK 391 YL L ++ + ++ K Sbjct: 191 YLILIGIVTILAKKVEKK 208 >gi|260662492|ref|ZP_05863387.1| amino acid ABC transporter permease component [Lactobacillus fermentum 28-3-CHN] gi|260553183|gb|EEX26126.1| amino acid ABC transporter permease component [Lactobacillus fermentum 28-3-CHN] Length = 245 Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 45/177 (25%), Positives = 94/177 (53%), Gaps = 12/177 (6%) Query: 189 IFVFSFVLGIVLSLFAT--RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246 I + SFV+G+V+++ R+S+ + + + +F ++ + L+ + + F Sbjct: 39 IAIISFVIGLVIAVITALIRISKPQGKFKAVWAVVRAVFSFYVWLFRSTPLLVQLFIVFF 98 Query: 247 DKPVLG-QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305 P +G QFN + + I S T A+ +E +R L+++P Q +AA ++G+ Sbjct: 99 GLPNVGIQFN---------AWTAGIITFSLNTGAYASETIRGALLSIPDSQWDAAYSIGM 149 Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362 T+R+ ++ PQA+R +PPL++ ++ L+K++SLA ++ ++ V I + Q Sbjct: 150 TYRQVLFRIVFPQALRVALPPLSNSFIGLVKDTSLASSITIVEMFMVSQQIASNNYQ 206 >gi|260467392|ref|ZP_05813564.1| polar amino acid ABC transporter, inner membrane subunit [Mesorhizobium opportunistum WSM2075] gi|259028852|gb|EEW30156.1| polar amino acid ABC transporter, inner membrane subunit [Mesorhizobium opportunistum WSM2075] Length = 219 Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 34/122 (27%), Positives = 72/122 (59%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + LS Y + ++AE+ ++G+ A+P+GQ EAA AL LT R V+ PQ +R++ PL + Sbjct: 92 LGLSLYYSGYLAEVFKAGIDAIPKGQQEAARALSLTRRDTVVFVIAPQMLRNVAAPLGNY 151 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 +++LK + + +++ I ++T + E + + ++L+L+++IA + R+ Sbjct: 152 LVSILKATPYLAILAVPEMLGRAFDIASETYRYAEPLTVAGIVFLALALLIAYGVKRIEQ 211 Query: 391 KI 392 ++ Sbjct: 212 RL 213 >gi|171316138|ref|ZP_02905363.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria MEX-5] gi|171098742|gb|EDT43536.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria MEX-5] Length = 216 Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 42/133 (31%), Positives = 73/133 (54%), Gaps = 1/133 (0%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G VSP +++ L+ +T+A++AEI R + AVP+GQ EA+ +L +++ + R V+LPQ Sbjct: 80 GLDVSP-WVAATAGLTFFTSAYLAEIWRGCVEAVPKGQWEASASLAMSYVEQLRHVILPQ 138 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378 A R I P + +K+++L +GF +L VG I N T + + + IY +L Sbjct: 139 AARIAIAPTVGFGVQAVKDTALVSIIGFTELTKVGVAISNATFRPFVVYGLVALIYFALC 198 Query: 379 IMIALFMNRLNAK 391 + + L + Sbjct: 199 YPLTRYARTLQRR 211 >gi|126737936|ref|ZP_01753666.1| ABC-type amino acid transport system, permease component [Roseobacter sp. SK209-2-6] gi|126721329|gb|EBA18033.1| ABC-type amino acid transport system, permease component [Roseobacter sp. SK209-2-6] Length = 221 Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 42/137 (30%), Positives = 76/137 (55%), Gaps = 5/137 (3%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 +F + Y+A+ A+ AE+VR G+++VP+GQ EAA+A+ ++ + + ++LPQA+ +++ Sbjct: 86 KFTAGYVAVGMNIGAYGAELVRGGILSVPKGQWEAALAINMSPAQRMQRIILPQALVNML 145 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT---GQAIEIILIWMFIYLSLSIMI 381 PP + + LLK ++L + ADL+ I + T QA L+ Y+ M+ Sbjct: 146 PPWGNLMIELLKGTALVSLISVADLMFETKQINSSTFLSAQAFGAALV--IYYILARFMV 203 Query: 382 ALFMNRLNAKIALKEKK 398 FM L +A K + Sbjct: 204 TPFMRWLEGYMARKMGR 220 >gi|91778290|ref|YP_553498.1| ABC amino acid transporter, inner membrane subunit [Burkholderia xenovorans LB400] gi|296160736|ref|ZP_06843550.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. Ch1-1] gi|91690950|gb|ABE34148.1| amino acid ABC transporter membrane protein 1, PAAT family [Burkholderia xenovorans LB400] gi|295889039|gb|EFG68843.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. Ch1-1] Length = 216 Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 43/116 (37%), Positives = 64/116 (55%), Gaps = 1/116 (0%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G VSP ++ C +A++IAEI+R G +++P G +EAA LGL+ R +L+PQ Sbjct: 81 GINVSPVVAAISTVSLC-SASYIAEILRGGFLSIPPGHLEAARMLGLSPFDMLRRILVPQ 139 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374 A R +P L ++ + L+K SSL VG A+L I T + +E L IY Sbjct: 140 AFRLTLPSLVNEMVLLIKASSLISVVGVAELTRTAQNIAASTYRPLEAYLAAGLIY 195 >gi|107023048|ref|YP_621375.1| amino acid ABC transporter permease [Burkholderia cenocepacia AU 1054] gi|116686711|ref|YP_839958.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia cenocepacia HI2424] gi|170735480|ref|YP_001774594.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia cenocepacia MC0-3] gi|254250728|ref|ZP_04944047.1| ABC polar amino acid transporter, inner membrane subunit [Burkholderia cenocepacia PC184] gi|105893237|gb|ABF76402.1| amino acid ABC transporter membrane protein 2, PAAT family [Burkholderia cenocepacia AU 1054] gi|116652426|gb|ABK13065.1| amino acid ABC transporter membrane protein 2, PAAT family [Burkholderia cenocepacia HI2424] gi|124879862|gb|EAY67218.1| ABC polar amino acid transporter, inner membrane subunit [Burkholderia cenocepacia PC184] gi|169821518|gb|ACA96099.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia cenocepacia MC0-3] Length = 216 Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 39/128 (30%), Positives = 70/128 (54%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P +++ L+ +T+A++AEI R + AVP+GQ EA+ +L +++ + R V+LPQA R Sbjct: 84 PPWVAATAGLTFFTSAYLAEIWRGCVEAVPKGQWEASASLAMSYVEQLRHVILPQAARIA 143 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 I P + +K+++L +GF +L VG I N T + + + IY +L + Sbjct: 144 IAPTVGFGVQAVKDTALVSIIGFTELTKVGIAISNATFRPFVVYGLVALIYFALCYPLTR 203 Query: 384 FMNRLNAK 391 + L + Sbjct: 204 YARTLQRR 211 >gi|326318471|ref|YP_004236143.1| polar amino acid ABC transporter inner membrane subunit [Acidovorax avenae subsp. avenae ATCC 19860] gi|323375307|gb|ADX47576.1| polar amino acid ABC transporter, inner membrane subunit [Acidovorax avenae subsp. avenae ATCC 19860] Length = 266 Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 40/126 (31%), Positives = 72/126 (57%), Gaps = 2/126 (1%) Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326 ++L I LS TAA +AE+ RSG++AVPRGQ +AA +LG+ + ++ PQA+R I+P Sbjct: 142 LTLPIGLS--TAAVVAEVYRSGVLAVPRGQADAARSLGMKETQVFFAIVFPQALRYIVPA 199 Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386 L +Q + ++K+++ V + +L+ +I + + LI +Y ++ I+ Sbjct: 200 LVAQLVIVVKDTTFGYVVTYGELMQNARVLIANYHSLVPVYLIVAALYCLVNYAISRASR 259 Query: 387 RLNAKI 392 RL + Sbjct: 260 RLGRPV 265 >gi|15903398|ref|NP_358948.1| amino acid ABC transporter permease [Streptococcus pneumoniae R6] gi|182684457|ref|YP_001836204.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae CGSP14] gi|15459002|gb|AAL00159.1| ABC transporter membrane-spanning permease - glutamine transport [Streptococcus pneumoniae R6] gi|182629791|gb|ACB90739.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae CGSP14] Length = 232 Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 48/161 (29%), Positives = 77/161 (47%), Gaps = 20/161 (12%) Query: 228 LIFGLPTLVLIALKYQLHFD---------------KPVLGQFNFIGGSTVS-----PEFM 267 L+F +P VLIA Q+H+ P+L Q FI S Sbjct: 45 LLFSIPLGVLIAFALQVHWKPLHYLINIYIWVMRGTPLLLQLIFIYYVLPSIGIRLDRLP 104 Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327 + IA AA+ AEI R G+ +PRGQ EAA L + R ++LPQ + ++P + Sbjct: 105 AAIIAFVLNYAAYFAEIFRGGIDTIPRGQYEAAKVLKFSPFDRVRYIILPQVTKIVLPSV 164 Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368 ++ ++L+K++SL A+G +DL+ T N+ + + L Sbjct: 165 FNEVMSLVKDTSLVYALGISDLILASRTAANRDASLVPMFL 205 >gi|319784007|ref|YP_004143483.1| polar amino acid ABC transporter inner membrane subunit [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317169895|gb|ADV13433.1| polar amino acid ABC transporter, inner membrane subunit [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 219 Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 37/133 (27%), Positives = 70/133 (52%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P + + L + A + A+I+R+G++AV GQ E A ++G + R V++PQA+R+ Sbjct: 87 PALAAGIVGLGLHFAVYNADIIRAGIVAVDVGQTEGARSIGFGKWQTLRHVVIPQAIRNT 146 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 PP+ + LLK SS+ +G A+LV I++T + E + +Y L++++ Sbjct: 147 APPIGGNLIALLKESSIVSVIGIAELVHSAQLAISETFRPFEFYITAAALYYILNLVLEA 206 Query: 384 FMNRLNAKIALKE 396 + R + + Sbjct: 207 ALRRFERHVEVSR 219 >gi|293393703|ref|ZP_06638012.1| arginine ABC superfamily ATP binding cassette transporter, permease protein [Serratia odorifera DSM 4582] gi|291423825|gb|EFE97045.1| arginine ABC superfamily ATP binding cassette transporter, permease protein [Serratia odorifera DSM 4582] Length = 242 Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 41/135 (30%), Positives = 81/135 (60%), Gaps = 1/135 (0%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 PE ++ AL+ AA++A V++G++A+ GQ +A ++LGLT + L++LPQA+R + Sbjct: 94 PEITTVVCALALIAAAYLAHAVKAGIVAIGPGQWQAGLSLGLTRWQTLALIVLPQALRMM 153 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT-GQAIEIILIWMFIYLSLSIMIA 382 +P +Q+++L+K++SLA VG +L + + N++ +E+ L +Y + + Sbjct: 154 VPSFINQWISLIKDTSLAYIVGVGELTFLATQVNNRSMAYPMEVFLFVALVYFVFCLALD 213 Query: 383 LFMNRLNAKIALKEK 397 L + LN + + + K Sbjct: 214 LLASGLNKRFSPQTK 228 >gi|289677305|ref|ZP_06498195.1| arginine/ornithine ABC transporter, permease protein [Pseudomonas syringae pv. syringae FF5] gi|330981782|gb|EGH79885.1| arginine/ornithine ABC transporter permease [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 232 Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 51/167 (30%), Positives = 86/167 (51%), Gaps = 11/167 (6%) Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL----YIALSCYTA 278 ++ T++I G P LV + L Y L QF+ + S + P S +A + T+ Sbjct: 56 WLYTYVIRGTPMLVQLFLIYY------GLAQFDAVRESFLWPWLSSATFCACLAFTINTS 109 Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338 A+ AEI+ L + P G++EAA A+G++ K R +LLP A+R +P +++ + +L+ + Sbjct: 110 AYTAEIIAGSLKSTPAGEIEAARAMGMSKAKMYRRILLPSALRRALPQYSNEVIMMLQTT 169 Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS-IMIALF 384 SLA V D+ T+ Q E + YL L+ I++ LF Sbjct: 170 SLASIVTLIDITGAARTVNAQFYLPFEAYITAGVFYLCLTFILVRLF 216 >gi|221212964|ref|ZP_03585940.1| ABC polar amino acid transporter, inner membrane subunit [Burkholderia multivorans CGD1] gi|221167177|gb|EED99647.1| ABC polar amino acid transporter, inner membrane subunit [Burkholderia multivorans CGD1] Length = 250 Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 49/143 (34%), Positives = 78/143 (54%), Gaps = 12/143 (8%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 +AL L +I F +P L+LI + +F P+L T P S+ AL+ Sbjct: 59 RALLLAFIGFFR--AIPVLMLI---FWTYFLMPILLH-------TDVPGLASVVCALALV 106 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 A++A V +G++A GQ +A ++LGLT + R VLLPQA+R + P +Q++ L+K Sbjct: 107 GGAYLAHAVHAGIVAAGAGQWQAGLSLGLTRWQTVRHVLLPQAVRIMTPSFVNQWVALVK 166 Query: 337 NSSLAVAVGFADLVSVGGTIINQ 359 ++SLA VG +L V + N+ Sbjct: 167 DTSLAYIVGVPELSFVATQVNNR 189 >gi|210629973|ref|ZP_03296196.1| hypothetical protein COLSTE_00080 [Collinsella stercoris DSM 13279] gi|210160724|gb|EEA91695.1| hypothetical protein COLSTE_00080 [Collinsella stercoris DSM 13279] Length = 212 Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 36/124 (29%), Positives = 68/124 (54%), Gaps = 3/124 (2%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +A + +T+A +AEIVR+GL A+P GQ EAA + G R ++LPQ ++I P L Q Sbjct: 85 LAFTLFTSAVMAEIVRAGLNAIPAGQFEAAQSQGFGFFATMRYIILPQTFKTITPALFGQ 144 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI---YLSLSIMIALFMNR 387 ++K+SS + A+ + ++ ++++++ F+ Y +L+ I+L + R Sbjct: 145 CTTVIKDSSYLSGINVAEFMYTTNVVMAHAVSLDQVLMLYGFVFALYFALNFGISLLVRR 204 Query: 388 LNAK 391 + Sbjct: 205 FQRR 208 Score = 37.0 bits (84), Expect = 5.8, Method: Compositional matrix adjust. Identities = 19/64 (29%), Positives = 37/64 (57%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 I+ GFV T ++ ++ + I+GT++ + + + W+ Y+E+FR P L+ I F+ Sbjct: 12 IMGGFVKTIEISALSIVCSVILGTVLALVKAYGPRPLRWLVSAYIELFRCTPNLLWILFI 71 Query: 149 YKSV 152 Y +V Sbjct: 72 YFTV 75 >gi|15675231|ref|NP_269405.1| putative amino acid ABC transporter permease [Streptococcus pyogenes M1 GAS] gi|71903621|ref|YP_280424.1| histidine transport system permease protein M [Streptococcus pyogenes MGAS6180] gi|71910797|ref|YP_282347.1| histidine transporter permease [Streptococcus pyogenes MGAS5005] gi|94990607|ref|YP_598707.1| histidine transport system permease protein hisM [Streptococcus pyogenes MGAS10270] gi|209559536|ref|YP_002286008.1| Amino acid ABC transporter, permease protein [Streptococcus pyogenes NZ131] gi|251782501|ref|YP_002996803.1| histidine transport system permease [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|13622400|gb|AAK34126.1| putative amino acid ABC transporter (permease protein) [Streptococcus pyogenes M1 GAS] gi|71802716|gb|AAX72069.1| histidine transport system permease protein M [Streptococcus pyogenes MGAS6180] gi|71853579|gb|AAZ51602.1| histidine transport system permease protein [Streptococcus pyogenes MGAS5005] gi|94544115|gb|ABF34163.1| Histidine transport system permease protein hisM [Streptococcus pyogenes MGAS10270] gi|209540737|gb|ACI61313.1| Amino acid ABC transporter, permease protein [Streptococcus pyogenes NZ131] gi|242391130|dbj|BAH81589.1| histidine transport system permease protein [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|323127387|gb|ADX24684.1| Amino acid ABC transporter, permease protein [Streptococcus dysgalactiae subsp. equisimilis ATCC 12394] Length = 213 Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 33/91 (36%), Positives = 54/91 (59%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +A + AA+ AEI R G+ A+P+GQ EAA L L + R ++LPQ + ++P + ++ Sbjct: 89 LAFTLNYAAYFAEIFRGGIEAIPKGQYEAAKVLKLKPLQTIRYIILPQVFKIVLPSVFNE 148 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361 +NL+K+SSL +G DL+ T N+ Sbjct: 149 VINLVKDSSLVYVLGVGDLLLASKTAANRDA 179 >gi|330719149|ref|ZP_08313749.1| L-cystine permease [Leuconostoc fallax KCTC 3537] Length = 248 Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 49/142 (34%), Positives = 76/142 (53%), Gaps = 8/142 (5%) Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGST--VSPEFMSLYIALSCYTAAFIAE 283 T I G P L+ + L Y + P L N+IG +T V+P + L+I AAF++E Sbjct: 61 TSFIRGTPILIQMFLVY---YGLPFL--LNYIGVNTDNVNP-LIYLFITYGLNMAAFLSE 114 Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343 I+R+ L +VP Q EAA+ G T R+ ++ PQAM IP + ++LL+++SLA Sbjct: 115 IIRAALESVPATQREAALTSGYTKRQMYMKIIFPQAMVIAIPSFATMVISLLQDTSLAFT 174 Query: 344 VGFADLVSVGGTIINQTGQAIE 365 +G D+V + T +E Sbjct: 175 IGVLDVVGKAKALGTATFHTVE 196 >gi|167589674|ref|ZP_02382062.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ubonensis Bu] Length = 216 Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 39/128 (30%), Positives = 70/128 (54%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P +++ L+ +T+A++AEI R + AVP+GQ EA+ +L +++ + R V+LPQA R Sbjct: 84 PPWVAATAGLTFFTSAYLAEIWRGCVEAVPKGQWEASASLAMSYIEQLRHVILPQAARIA 143 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 I P + +K+++L +GF +L VG I N T + + + IY +L + Sbjct: 144 IAPTVGFGVQAVKDTALVSIIGFTELTKVGIAISNATFRPFVVYGLVALIYFALCYPLTR 203 Query: 384 FMNRLNAK 391 + L + Sbjct: 204 YARTLQRR 211 >gi|33599679|ref|NP_887239.1| putative permease component of ABC transporter [Bordetella bronchiseptica RB50] gi|33567276|emb|CAE31189.1| putative permease component of ABC transporter [Bordetella bronchiseptica RB50] Length = 216 Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 37/123 (30%), Positives = 75/123 (60%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +ALS +AA+++E RSG++ V RGQ+EAA +LG+ ++ ++LPQA+R P + ++ Sbjct: 90 LALSLCSAAYLSENFRSGILGVDRGQIEAAQSLGMGAARSLFRIILPQAIRIAAPTMGTR 149 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 Y+ L+K++SLA + +L + + + T + +E+ +I +Y ++ M+ + + Sbjct: 150 YIALMKDTSLASTITVVELTKMAEQVGSNTFRYMEMFIIAGALYWVINQMLTFIQVWVES 209 Query: 391 KIA 393 K+ Sbjct: 210 KLG 212 >gi|59802319|ref|YP_209031.1| putative ABC transporter, permease protein, amino acid [Neisseria gonorrhoeae FA 1090] gi|194099717|ref|YP_002002852.1| Putative ABC transporter, permease protein, amino acid [Neisseria gonorrhoeae NCCP11945] gi|239999906|ref|ZP_04719830.1| Putative ABC transporter, permease protein, amino acid [Neisseria gonorrhoeae 35/02] gi|240013147|ref|ZP_04720060.1| Putative ABC transporter, permease protein, amino acid [Neisseria gonorrhoeae DGI18] gi|240015590|ref|ZP_04722130.1| Putative ABC transporter, permease protein, amino acid [Neisseria gonorrhoeae FA6140] gi|240081802|ref|ZP_04726345.1| Putative ABC transporter, permease protein, amino acid [Neisseria gonorrhoeae FA19] gi|240114081|ref|ZP_04728571.1| Putative ABC transporter, permease protein, amino acid [Neisseria gonorrhoeae MS11] gi|240114680|ref|ZP_04728742.1| Putative ABC transporter, permease protein, amino acid [Neisseria gonorrhoeae PID18] gi|240116882|ref|ZP_04730944.1| Putative ABC transporter, permease protein, amino acid [Neisseria gonorrhoeae PID1] gi|240120218|ref|ZP_04733180.1| Putative ABC transporter, permease protein, amino acid [Neisseria gonorrhoeae PID24-1] gi|240126636|ref|ZP_04739522.1| Putative ABC transporter, permease protein, amino acid [Neisseria gonorrhoeae SK-92-679] gi|240127226|ref|ZP_04739887.1| Putative ABC transporter, permease protein, amino acid [Neisseria gonorrhoeae SK-93-1035] gi|254492736|ref|ZP_05105907.1| amino acid ABC transporter [Neisseria gonorrhoeae 1291] gi|268595715|ref|ZP_06129882.1| ABC-type amino acid transport system protein [Neisseria gonorrhoeae 35/02] gi|268597901|ref|ZP_06132068.1| ABC-type amino acid transport system protein [Neisseria gonorrhoeae FA19] gi|268600151|ref|ZP_06134318.1| ABC-type amino acid transport system protein [Neisseria gonorrhoeae MS11] gi|268600324|ref|ZP_06134491.1| ABC-type amino acid transport system protein [Neisseria gonorrhoeae PID18] gi|268602556|ref|ZP_06136723.1| ABC-type amino acid transport system protein [Neisseria gonorrhoeae PID1] gi|268685217|ref|ZP_06152079.1| ABC-type amino acid transport system protein [Neisseria gonorrhoeae SK-92-679] gi|268685585|ref|ZP_06152447.1| ABC-type amino acid transport system protein [Neisseria gonorrhoeae SK-93-1035] gi|293397954|ref|ZP_06642160.1| polar amino acid transport system permease [Neisseria gonorrhoeae F62] gi|59719214|gb|AAW90619.1| putative ABC transporter, permease protein, amino acid [Neisseria gonorrhoeae FA 1090] gi|193935007|gb|ACF30831.1| Putative ABC transporter, permease protein, amino acid [Neisseria gonorrhoeae NCCP11945] gi|226511776|gb|EEH61121.1| amino acid ABC transporter [Neisseria gonorrhoeae 1291] gi|268549104|gb|EEZ44522.1| ABC-type amino acid transport system protein [Neisseria gonorrhoeae 35/02] gi|268551689|gb|EEZ46708.1| ABC-type amino acid transport system protein [Neisseria gonorrhoeae FA19] gi|268584282|gb|EEZ48958.1| ABC-type amino acid transport system protein [Neisseria gonorrhoeae MS11] gi|268584455|gb|EEZ49131.1| ABC-type amino acid transport system protein [Neisseria gonorrhoeae PID18] gi|268586687|gb|EEZ51363.1| ABC-type amino acid transport system protein [Neisseria gonorrhoeae PID1] gi|268625501|gb|EEZ57901.1| ABC-type amino acid transport system protein [Neisseria gonorrhoeae SK-92-679] gi|268625869|gb|EEZ58269.1| ABC-type amino acid transport system protein [Neisseria gonorrhoeae SK-93-1035] gi|291611900|gb|EFF40969.1| polar amino acid transport system permease [Neisseria gonorrhoeae F62] gi|317165201|gb|ADV08742.1| putative ABC transporter, permease protein, amino acid [Neisseria gonorrhoeae TCDC-NG08107] Length = 219 Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 53/181 (29%), Positives = 92/181 (50%), Gaps = 16/181 (8%) Query: 228 LIFGLPTLVLIALKY-----------QLHFDKPVLGQ--FNFIGGSTVSPE---FMSLYI 271 L+FGLP V+ A + +L + P+L Q F + G + + F I Sbjct: 32 LLFGLPVAVVTAYRIRPFYALARAYIELSRNTPLLIQLFFLYYGLPKMGIKWDGFTCGVI 91 Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 AL A+++AE VR+G++AVP+GQ+ A A+GL+ + R V LPQ +P + + Sbjct: 92 ALVFLGASYMAEAVRAGILAVPKGQVGAGKAIGLSRFQVFRYVELPQVWAVAVPAIGANI 151 Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 L L+K +S+ VG A+L+ V +I + E + + YL + + ++L R+ + Sbjct: 152 LFLMKETSVVSTVGIAELLFVTKDVIGMDYKTNEALFLLFAAYLIILLPVSLLARRIENR 211 Query: 392 I 392 + Sbjct: 212 V 212 >gi|260461733|ref|ZP_05809979.1| polar amino acid ABC transporter, inner membrane subunit [Mesorhizobium opportunistum WSM2075] gi|319785285|ref|YP_004144761.1| polar amino acid ABC transporter inner membrane subunit [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|259032374|gb|EEW33639.1| polar amino acid ABC transporter, inner membrane subunit [Mesorhizobium opportunistum WSM2075] gi|317171173|gb|ADV14711.1| polar amino acid ABC transporter, inner membrane subunit [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 268 Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 57/209 (27%), Positives = 96/209 (45%), Gaps = 13/209 (6%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 VF FVL + L L A + + KA +I G P L+ I L Y + + Sbjct: 67 VFGFVLALPLGL-AQVVGPSWLSLPAKAF------CTVIRGTPLLLQIWLLY--YGLGSL 117 Query: 251 LGQFNFIGGSTVSPEFMSLY----IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306 Q+ +I S + P + +AL+ A ++ E++R VP GQ+EA A G+ Sbjct: 118 FPQYPWIRESDIWPLVRQAWPYAVLALTLSFAGYVGEVMRGAFAGVPSGQLEAGRAFGMN 177 Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 K R V LPQA+ +P L + + LK++ L + DL +V + T E Sbjct: 178 RWKLFRRVWLPQAIHKALPTLAGETVMQLKSTPLVATITVVDLYAVSARVRQDTLVIYEP 237 Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALK 395 +L+ Y+ L+ ++ +R+ A+I ++ Sbjct: 238 LLLLALTYMVLTGLLVWIFSRIEARIPVR 266 >gi|167619033|ref|ZP_02387664.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Burkholderia thailandensis Bt4] Length = 219 Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 56/211 (26%), Positives = 105/211 (49%), Gaps = 14/211 (6%) Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247 K V S VLG+++ L + R + + A+ Y+S L+ G P LV + + +++ Sbjct: 23 KFAVASMVLGLIVGLVVA-IVRIGNNRFLSAIAQGYVS--LMRGTPLLVQM---FVVYYG 76 Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307 P +G ++ P ++ L+ A+++E +R ++ + RGQ A+ +LGLTH Sbjct: 77 LPDIG-------ISLDPTSAGIF-TLTLNAGAYLSESMRGAILGIGRGQWAASHSLGLTH 128 Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367 + R V+ PQA+R +P L + ++L+K++SL + +L+ +I T Q + + Sbjct: 129 AQTLRYVICPQALRLAVPSLGNTLISLIKDTSLVSVITVTELLRSTQEVIASTFQPLPLY 188 Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 L IY LS ++ R+ + AL Sbjct: 189 LAAAAIYWVLSTLLVRLQGRIETRCALPSTH 219 >gi|148261727|ref|YP_001235854.1| polar amino acid ABC transporter, inner membrane subunit [Acidiphilium cryptum JF-5] gi|326405221|ref|YP_004285303.1| putative ABC transporter permease [Acidiphilium multivorum AIU301] gi|146403408|gb|ABQ31935.1| amino acid ABC transporter membrane protein, PAAT family [Acidiphilium cryptum JF-5] gi|325052083|dbj|BAJ82421.1| putative ABC transporter permease protein [Acidiphilium multivorum AIU301] Length = 242 Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 42/116 (36%), Positives = 69/116 (59%), Gaps = 8/116 (6%) Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290 GLP ++ I Y + P+ G + G T + + +L I L A++AEI R+GL Sbjct: 75 GLPHILTI---YLIGQGLPIAG-LSLFGNDTYA--YAALSIGL--IEGAYMAEIFRAGLQ 126 Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346 +V RGQ+EAA LG+T + R ++LPQ +R ++PPLT Q++ ++K ++L +G Sbjct: 127 SVERGQIEAARTLGMTRWQTMRDIILPQGIRRVLPPLTGQFILVIKGTALVFLLGL 182 Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust. Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 4/77 (5%) Query: 87 TAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIF 146 T + VG NT LA + ++G + G L+ +V CRVYV++ R +P ++ I+ Sbjct: 24 TLLRVGLPNTILLAVLASLIGMVVGLAIATGLLARPAVVRLACRVYVDILRGLPHILTIY 83 Query: 147 FLYKSVLSVLPIPDHSI 163 + + LPI S+ Sbjct: 84 LIGQG----LPIAGLSL 96 >gi|167724446|ref|ZP_02407682.1| amino acid ABC transporter, permease/ATP-binding protein, His/Glu/Gln/Arg/opine family [Burkholderia pseudomallei DM98] Length = 229 Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 47/141 (33%), Positives = 81/141 (57%), Gaps = 6/141 (4%) Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH-RKATRLVLLPQAM 320 +SP F + + L+ AAF AE +R G+++V +GQ+EAA ALGL R+ATR+V LPQAM Sbjct: 81 ISP-FCAAVLGLTLNHAAFAAEGIRGGILSVDQGQLEAAAALGLPRARQATRIV-LPQAM 138 Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL---IWMFIYLSL 377 R+ +P + + L K SS+ + +L I + + I +++ +W I L++ Sbjct: 139 RAFLPVAFNDLIALAKGSSMVYVLAMPELFYTVQVIYRRNLEVIPLLMVATVWYLIILTV 198 Query: 378 SIMIALFMNRLNAKIALKEKK 398 ++ + R A+ A++E + Sbjct: 199 LSIVQAQVERRYARGAVREPE 219 >gi|91789328|ref|YP_550280.1| amino acid ABC transporter permease [Polaromonas sp. JS666] gi|91698553|gb|ABE45382.1| amino acid ABC transporter membrane protein 1, PAAT family [Polaromonas sp. JS666] Length = 220 Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 40/134 (29%), Positives = 75/134 (55%), Gaps = 1/134 (0%) Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317 G +SPE S+ IA+ +A+ EI+R+G+ A P+GQ+EAA++L L + V+LP Sbjct: 83 AGIKLSPEVASI-IAMVINLSAYATEIIRAGIDATPKGQIEAAMSLALNRMQTFVRVVLP 141 Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377 A+R + P L SQ + ++ S++ + +L I ++ +A E ++ +YL+L Sbjct: 142 PALRKVWPSLVSQIIIVMLGSAVCGQISTEELSYAANLIQSRNFRAFEAYIVATLVYLTL 201 Query: 378 SIMIALFMNRLNAK 391 ++ + +N L + Sbjct: 202 AVGVRQLLNWLGPR 215 >gi|19746201|ref|NP_607337.1| putative amino acid ABC transporter (permease protein) [Streptococcus pyogenes MGAS8232] gi|94994530|ref|YP_602628.1| Histidine transport system permease protein hisM [Streptococcus pyogenes MGAS10750] gi|139473660|ref|YP_001128376.1| putative amino acid ABC transporter permease protein [Streptococcus pyogenes str. Manfredo] gi|306827253|ref|ZP_07460540.1| polar amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus pyogenes ATCC 10782] gi|19748383|gb|AAL97836.1| putative amino acid ABC transporter (permease protein) [Streptococcus pyogenes MGAS8232] gi|94548038|gb|ABF38084.1| Histidine transport system permease protein hisM [Streptococcus pyogenes MGAS10750] gi|134271907|emb|CAM30145.1| putative amino acid ABC transporter permease protein [Streptococcus pyogenes str. Manfredo] gi|304430400|gb|EFM33422.1| polar amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus pyogenes ATCC 10782] Length = 213 Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 33/91 (36%), Positives = 54/91 (59%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +A + AA+ AEI R G+ A+P+GQ EAA L L + R ++LPQ + ++P + ++ Sbjct: 89 LAFTLNYAAYFAEIFRGGIEAIPKGQYEAAKVLKLKPLQTIRYIILPQVFKIVLPSVFNE 148 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361 +NL+K+SSL +G DL+ T N+ Sbjct: 149 VINLVKDSSLVYVLGVGDLLLASKTAANRDA 179 >gi|325694842|gb|EGD36747.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK150] Length = 219 Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 37/127 (29%), Positives = 76/127 (59%), Gaps = 4/127 (3%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I+ + +T+A +AEI+R GL A+ GQ EA ++ G T + R ++LPQA+R ++P + SQ Sbjct: 89 ISFTVFTSAALAEIIRGGLNAIDPGQTEAGLSQGFTQFQILRFIILPQAIRKMLPAIISQ 148 Query: 331 YLNLLKNSSLAVAV-GFADLVSVGGTIINQTGQAIEIILIWMF---IYLSLSIMIALFMN 386 ++ ++K++SL +V +L ++ + +A ++ +++ IY ++ I+ F Sbjct: 149 FVTVIKDTSLLYSVIALQELFGSAQILMGRYFEAEQVFALYLLVAAIYFLINFAISSFSR 208 Query: 387 RLNAKIA 393 +L+ + A Sbjct: 209 KLSQRWA 215 Score = 41.2 bits (95), Expect = 0.27, Method: Compositional matrix adjust. Identities = 22/61 (36%), Positives = 36/61 (59%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 IL G T ++F ++ +TI GT++ R NKL+ I +Y+E RN+P L+ IF + Sbjct: 16 ILKGLWLTLQISFISIVLSTIFGTILAVMRNGKNKLLKLIASIYIEFVRNVPNLLWIFTI 75 Query: 149 Y 149 + Sbjct: 76 F 76 >gi|253574816|ref|ZP_04852156.1| L-cystine ABC transporter, permease [Paenibacillus sp. oral taxon 786 str. D14] gi|251845862|gb|EES73870.1| L-cystine ABC transporter, permease [Paenibacillus sp. oral taxon 786 str. D14] Length = 214 Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 49/168 (29%), Positives = 87/168 (51%), Gaps = 18/168 (10%) Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251 F ++G+V+++ RL ++ + + +Y+S +I G P LV I + Y D Sbjct: 28 FGLIIGLVVAI--ARLKGNWLVR---GIARVYVS--VIRGTPLLVQIFIVYYGVVDY--- 77 Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311 G T+ P + Y+ALS A+++E R + ++P+GQ EAA A G+T Sbjct: 78 -------GITLGP-LTAAYVALSINVGAYLSETFRGAIQSIPKGQTEAAYATGMTGWMTM 129 Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359 R ++LPQA R I P+ + ++ +LK ++L A+ +L+ +I Q Sbjct: 130 RRIILPQAARVAIAPMGNTFIGMLKETALVSAITVTELLRSAQLLIAQ 177 Score = 40.8 bits (94), Expect = 0.38, Method: Compositional matrix adjust. Identities = 26/57 (45%), Positives = 30/57 (52%), Gaps = 6/57 (10%) Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVL 165 IIG +V RL N LV I RVYV V R P LV IF +Y V+ D+ I L Sbjct: 31 IIGLVVAIARLKGNWLVRGIARVYVSVIRGTPLLVQIFIVYYGVV------DYGITL 81 >gi|296158385|ref|ZP_06841216.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. Ch1-1] gi|295891329|gb|EFG71116.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. Ch1-1] Length = 218 Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 65/211 (30%), Positives = 106/211 (50%), Gaps = 22/211 (10%) Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL--IFGLPTLVLIALKYQLHFD 247 FV S VLG+VL+L +R +TF+ I GLP +V + + ++F Sbjct: 28 FVLSTVLGLVLALMRVSDNRAVSNAA---------ATFINVIRGLPIIVQL---FYIYFV 75 Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307 P LG + S F+ L +A S Y A E R+G+ A+ GQ+EAA ++G+ Sbjct: 76 LPDLG----VQLSAFQAGFIGLGVAYSVYQA----ENFRAGIQAIDPGQIEAAQSIGMRG 127 Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367 R V+LPQA R +P + + +LK+SSLA + A++ G I + T Q + + Sbjct: 128 AMIMRRVVLPQAFRISLPAYGNTLVMMLKDSSLASTITVAEMTRAGQLIASSTFQNMTVF 187 Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 + +YL LS+ + + R+ ++ LK K+ Sbjct: 188 TLVALLYLGLSLPLVYGLRRIERRLGLKGKR 218 >gi|295103462|emb|CBL01006.1| amino acid ABC transporter membrane protein, PAAT family (TC 3.A.1.3.-) [Faecalibacterium prausnitzii SL3/3] Length = 227 Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 39/133 (29%), Positives = 75/133 (56%), Gaps = 7/133 (5%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + IA + A+ AE +R L +VP+GQ+EA +G++ + R ++LPQA+R+ +P Sbjct: 95 FPAAVIAFAFNEGAYCAETMRGALESVPQGQLEAGYCVGMSWWQIMRRIVLPQALRTAVP 154 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 L++ + ++K++SLA + A+L G + +T I++ IY ++++ LF Sbjct: 155 ALSNSLIGMIKDTSLASNITVAELFMAGQRVAART-------YIFLPIYCEVAVVYLLFC 207 Query: 386 NRLNAKIALKEKK 398 + AL E++ Sbjct: 208 TVITKLQALLERQ 220 >gi|254389485|ref|ZP_05004712.1| glutamate transport system permease protein gluD [Streptomyces clavuligerus ATCC 27064] gi|294815862|ref|ZP_06774505.1| Putative glutamate ABC transporter permease [Streptomyces clavuligerus ATCC 27064] gi|326444204|ref|ZP_08218938.1| glutamate transporter permease [Streptomyces clavuligerus ATCC 27064] gi|197703199|gb|EDY49011.1| glutamate transport system permease protein gluD [Streptomyces clavuligerus ATCC 27064] gi|294328461|gb|EFG10104.1| Putative glutamate ABC transporter permease [Streptomyces clavuligerus ATCC 27064] Length = 291 Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 39/120 (32%), Positives = 69/120 (57%), Gaps = 3/120 (2%) Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327 +L L+ Y + +AE+ R+G+ +V RGQ EAA ALGL + VL+PQA+R+++P + Sbjct: 134 ALVAGLTLYNGSVLAEVFRAGVHSVDRGQREAAYALGLRKTQVMTYVLVPQAVRAMLPAI 193 Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF---IYLSLSIMIALF 384 SQ + LK++SL + + + + G I + + I + M IY+ L ++++ F Sbjct: 194 ISQLVVALKDTSLGYLITYEEFLHAGKLIASNLDYDLPFIPVVMVISPIYIGLCMLLSWF 253 >gi|73537419|ref|YP_297786.1| amino acid ABC transporter permease [Ralstonia eutropha JMP134] gi|72120756|gb|AAZ62942.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Ralstonia eutropha JMP134] Length = 223 Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 37/128 (28%), Positives = 71/128 (55%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + L+ A+++E +R ++ + RGQ AA +LGL+H + R ++ PQA+R +P L + Sbjct: 96 LTLTANAGAYLSESMRGAILGISRGQWSAAHSLGLSHLQTLRYIVCPQALRLAVPSLGNT 155 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++L+K++SL + +L+ II T Q + + L IY LS ++ R+ A Sbjct: 156 LISLIKDTSLVSVITVTELLRSSQEIIASTFQPLPLYLSVAAIYWLLSTGLSWVQRRIEA 215 Query: 391 KIALKEKK 398 ++ L+ + Sbjct: 216 RLTLRVTR 223 >gi|220908737|ref|YP_002484048.1| polar amino acid ABC transporter inner membrane subunit [Cyanothece sp. PCC 7425] gi|219865348|gb|ACL45687.1| polar amino acid ABC transporter, inner membrane subunit [Cyanothece sp. PCC 7425] Length = 221 Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 33/81 (40%), Positives = 56/81 (69%) Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 +L+ AA+ +E+ R+GL +V RGQ EAA++LGLT ++ ++LPQA+ +IPPL + + Sbjct: 96 SLALNYAAYESEVFRAGLASVDRGQNEAALSLGLTGEQSFTRIILPQAIPLMIPPLVNDF 155 Query: 332 LNLLKNSSLAVAVGFADLVSV 352 + +LK+S++ + DL SV Sbjct: 156 IYMLKDSAIVSVIAGTDLTSV 176 >gi|309973357|gb|ADO96558.1| Arginine ABC transporter, permease protein ArtQ [Haemophilus influenzae R2846] Length = 221 Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 57/209 (27%), Positives = 103/209 (49%), Gaps = 13/209 (6%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY--QLHFDK 248 V S +LG+ LSL L + GK + + L+ GLP ++++ L Y + Sbjct: 21 VCSLILGLFLSLIFVALEAN--RFVGKPMTVFVA---LLRGLPEIIVVLLVYFGSTELVE 75 Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308 + G++ G F +ALS AA+ ++ +R + A+P+GQ E+ ALGL+ Sbjct: 76 MLTGEYIEFGA------FGCGVLALSLIFAAYASQTLRGAIQAIPKGQWESGAALGLSKS 129 Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368 +++PQ R +P L++Q+L LLK+++L +G DL+ I T Q Sbjct: 130 YTFIHIVMPQVWRHALPGLSTQWLVLLKDTALVSLIGVDDLMHQADLINTNTHQPFTWYG 189 Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKEK 397 I IYL+++++ + + +L + E+ Sbjct: 190 IAALIYLAVTLISQVGIRKLELRFTRFER 218 >gi|118587809|ref|ZP_01545219.1| ABC amino acid transporter, inner membrane subunit [Stappia aggregata IAM 12614] gi|118439431|gb|EAV46062.1| ABC amino acid transporter, inner membrane subunit [Stappia aggregata IAM 12614] Length = 211 Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 57/173 (32%), Positives = 84/173 (48%), Gaps = 27/173 (15%) Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279 PL+ F+ FGLP L L YQ F L +ALS +A Sbjct: 55 PLIVQMFFVAFGLPLL----LGYQWPFWAHAL-------------------LALSINFSA 91 Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339 + AEI+R+GL ++ GQ EAA ALGL + V LPQA+ ++ P L SQ++ L + Sbjct: 92 YFAEILRAGLASLGAGQAEAADALGLPRWLSFVKVCLPQAVAAMYPSLNSQFIFLFLTTG 151 Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI----MIALFMNRL 388 + +G DL G I ++ ++ EI IYL +S+ ++AL +RL Sbjct: 152 IISEIGVTDLTWAGLVIDSRNFRSFEIFFTLTIIYLLMSLGFKTLLALLHDRL 204 >gi|187924720|ref|YP_001896362.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia phytofirmans PsJN] gi|187715914|gb|ACD17138.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia phytofirmans PsJN] Length = 218 Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 58/179 (32%), Positives = 90/179 (50%), Gaps = 22/179 (12%) Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL--IFGLPTLVLIALKYQLHFD 247 FV S VLG++L+L +R +TF+ I GLP +V + + ++F Sbjct: 28 FVLSTVLGLLLALMRVSDNRVVSNAA---------ATFINVIRGLPIIVQL---FYIYFV 75 Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307 P LG + S F+ L IA S Y A E R+G+ A+ GQ+EAA ++G+ Sbjct: 76 LPDLG----VQLSAFQAGFIGLGIAYSVYQA----ENFRAGIQAIDHGQIEAAQSIGMRG 127 Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 R V+LPQA R +PP + + +LK+SSLA + A++ G I + T Q + + Sbjct: 128 AMIMRRVVLPQAFRIALPPYGNTLVMMLKDSSLASTITVAEMTRAGQLIASSTFQNMTV 186 Score = 37.0 bits (84), Expect = 5.5, Method: Compositional matrix adjust. Identities = 18/61 (29%), Positives = 36/61 (59%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G V T + F + +T++G L+ R+S N++V+ ++ V R +P +V +F++ Sbjct: 13 LLKGAVVTIEITFCSFVLSTVLGLLLALMRVSDNRVVSNAAATFINVIRGLPIIVQLFYI 72 Query: 149 Y 149 Y Sbjct: 73 Y 73 >gi|116334030|ref|YP_795557.1| ABC-type amino acid transport system, permease component [Lactobacillus brevis ATCC 367] gi|116099377|gb|ABJ64526.1| ABC-type amino acid transport system, permease component [Lactobacillus brevis ATCC 367] Length = 229 Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 56/208 (26%), Positives = 95/208 (45%), Gaps = 19/208 (9%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 V +F L + + T L++ H + L YIS + G+P LV++ + Y Sbjct: 35 VMAFGLATIWGMLLT-LAQLSHVRVLHGLARAYIS--FMRGVPMLVVLFIVY-------- 83 Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 F F G T P + I+ + AAF++E+ RS + + GQ EAA ++GL +RK Sbjct: 84 ---FGF--GLTAVPAAI---ISFTLGAAAFVSEVFRSAFLGIDHGQYEAAYSIGLPYRKV 135 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370 R +++PQA R IP L + L++ K +SLA + D+ + + I + Sbjct: 136 MRFIIIPQAFRISIPALGNILLDMFKGTSLAAMITVTDMFMQAKIVAGANQDYMTIYITI 195 Query: 371 MFIYLSLSIMIALFMNRLNAKIALKEKK 398 +Y ++I N+L + K Sbjct: 196 AILYWLCCVVITTGQNQLERWLDFDRPK 223 >gi|326803651|ref|YP_004321469.1| ABC transporter, permease protein [Aerococcus urinae ACS-120-V-Col10a] gi|326651650|gb|AEA01833.1| ABC transporter, permease protein [Aerococcus urinae ACS-120-V-Col10a] Length = 230 Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 54/183 (29%), Positives = 90/183 (49%), Gaps = 28/183 (15%) Query: 189 IFVFSFVLGIVLSL---FATRLSRHFHEKTGKALPLLYIST------FLIF-GLPTLVLI 238 I + SF LG +L L + + ++++ K + T FL+F GLP L+ Sbjct: 26 ILIISFTLGNLLGLILAYGLEAKQRWYQQITKTYIFIMRCTPPIVMIFLVFYGLPQLLKW 85 Query: 239 ALKYQLH-FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQM 297 LK +H F + V + IAL+ A I+ + ++ AV +GQ Sbjct: 86 WLKINIHDFSQAVF-----------------VIIALTLLYGANISVVFKASYDAVNKGQR 128 Query: 298 EAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII 357 EA +ALGL+ + +LLPQA+R +P + + ++LLKN++LA +G D++ G I Sbjct: 129 EAGLALGLSEARTFFRILLPQALRIALPNIGNSTVSLLKNTALAYTIGLIDVMGAGQLFI 188 Query: 358 NQT 360 N+ Sbjct: 189 NRN 191 >gi|307729124|ref|YP_003906348.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia sp. CCGE1003] gi|307583659|gb|ADN57057.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. CCGE1003] Length = 225 Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 55/199 (27%), Positives = 98/199 (49%), Gaps = 14/199 (7%) Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252 SF +G+ L+ F L R F K A Y+ +L G P LV + + + + P +G Sbjct: 30 SFAIGLALA-FIVALVRLFGPKWAVAAVRFYV--WLFRGSPLLVQL---FVIFYGLPNVG 83 Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312 V + I S A+ +E++R + ++P+GQ EAA ++G+T +A R Sbjct: 84 --------IVLDPLTAAIIGFSLNVGAYNSEVIRGVIESIPKGQWEAAYSMGMTREQALR 135 Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372 +LPQA R +PPL++ ++ L+K++SLA + ++ I + T + + + Sbjct: 136 RAILPQAARVALPPLSNSFIALVKDTSLAAVLTVPEVFQAAQRIASVTYEPLILYTEAAL 195 Query: 373 IYLSLSIMIALFMNRLNAK 391 +YL S +++ RL K Sbjct: 196 VYLLFSSVLSSAQVRLERK 214 >gi|229918160|ref|YP_002886806.1| polar amino acid ABC transporter inner membrane subunit [Exiguobacterium sp. AT1b] gi|229469589|gb|ACQ71361.1| polar amino acid ABC transporter, inner membrane subunit [Exiguobacterium sp. AT1b] Length = 216 Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 37/129 (28%), Positives = 73/129 (56%) Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326 +L L + AA+I+E R+ + +V +GQ+EA++ALG+ K + ++ PQA+ IPP Sbjct: 88 QALIFGLGFHFAAYISEAFRAAINSVDKGQVEASVALGIPKMKRFKDIIFPQALSRAIPP 147 Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386 +++ ++++K++SL + +L V I T + ++L IY LS +I + Sbjct: 148 VSNSVIDIIKSTSLGSVIAVQELTYVSDQIAATTYLVMPLLLFSASIYWILSTLIQAGQH 207 Query: 387 RLNAKIALK 395 +L + A++ Sbjct: 208 KLEQRYAIR 216 >gi|270292830|ref|ZP_06199041.1| amino acid ABC transporter, permease protein [Streptococcus sp. M143] gi|270278809|gb|EFA24655.1| amino acid ABC transporter, permease protein [Streptococcus sp. M143] Length = 229 Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 51/176 (28%), Positives = 83/176 (47%), Gaps = 24/176 (13%) Query: 215 TGKALPLLYISTFLIFGLPTLVLIALKYQLHFD---------------KPVLGQFNFIGG 259 +G ++ L LIF +P VLIA Q+H+ P+L Q FI Sbjct: 29 SGASMTLQVFVLVLIFSIPLGVLIAFALQVHWKLLHYLINIYIWIMRGTPLLLQLIFI-- 86 Query: 260 STVSP-------EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312 V P + IA AA+ AEI R G+ +P+GQ EAA L + R Sbjct: 87 YYVLPNIGIRLDRLPAAIIAFVLNYAAYFAEIFRGGIDTIPKGQYEAAKVLKFSPFATVR 146 Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368 ++LPQ + ++P + ++ ++L+K++SL A+G +DL+ T N+ + + L Sbjct: 147 YIILPQVTKIVLPSVFNEVMSLVKDTSLVYALGISDLILASRTAANRDASLVPMFL 202 >gi|170693091|ref|ZP_02884252.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC [Burkholderia graminis C4D1M] gi|170142089|gb|EDT10256.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC [Burkholderia graminis C4D1M] Length = 219 Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 38/123 (30%), Positives = 67/123 (54%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + L + A+ +EI+R L +VP GQ EAA+AL ++ R ++LPQAM + +PP T+ Sbjct: 88 VGLGLHYGAYGSEILRGALRSVPGGQFEAALALNMSPLTRMRRIILPQAMINALPPATNL 147 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 + LLK +SL + +DL + T + EI ++ + IY L+ ++ M Sbjct: 148 MIELLKGTSLVSLITLSDLTFRARQLDEATFKTAEIFMLTLVIYFVLAQILVALMRHFEH 207 Query: 391 KIA 393 +++ Sbjct: 208 RVS 210 >gi|167820594|ref|ZP_02452274.1| amino acid ABC transporter, permease/ATP-binding protein, His/Glu/Gln/Arg/opine family [Burkholderia pseudomallei 91] Length = 313 Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 47/141 (33%), Positives = 81/141 (57%), Gaps = 6/141 (4%) Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH-RKATRLVLLPQAM 320 +SP F + + L+ AAF AE +R G+++V +GQ+EAA ALGL R+ATR+V LPQAM Sbjct: 164 ISP-FCAAVLGLTLNHAAFAAEGIRGGILSVDQGQLEAAAALGLPRARQATRIV-LPQAM 221 Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL---IWMFIYLSL 377 R+ +P + + L K SS+ + +L I + + I +++ +W I L++ Sbjct: 222 RAFLPVAFNDLIALAKGSSMVYVLAMPELFYTVQVIYRRNLEVIPLLMVATVWYLIILTV 281 Query: 378 SIMIALFMNRLNAKIALKEKK 398 ++ + R A+ A++E + Sbjct: 282 LSIVQAQVERRYARGAVREPE 302 >gi|311280751|ref|YP_003942982.1| binding-protein-dependent transport systems inner membrane component [Enterobacter cloacae SCF1] gi|308749946|gb|ADO49698.1| binding-protein-dependent transport systems inner membrane component [Enterobacter cloacae SCF1] Length = 226 Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 47/136 (34%), Positives = 77/136 (56%), Gaps = 10/136 (7%) Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280 LLY +I G+P + +I + L + P L + G TV+ +AL+ +T+A Sbjct: 63 LLYGWAEVIRGIPLIFVI---FWLWYLLPWLTGSDLPGAVTVT-------LALAWFTSAA 112 Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340 + V +G+ A+ GQ EAA+A G + + R VLLPQA+R+++P L ++LLK++SL Sbjct: 113 VMHTVYAGVQALHDGQREAALAQGFSGGQTLRRVLLPQALRNVLPSLVGIGISLLKDTSL 172 Query: 341 AVAVGFADLVSVGGTI 356 A V +L +V G + Sbjct: 173 AFIVNVPELTTVAGQV 188 >gi|260462849|ref|ZP_05811054.1| polar amino acid ABC transporter, inner membrane subunit [Mesorhizobium opportunistum WSM2075] gi|259031493|gb|EEW32764.1| polar amino acid ABC transporter, inner membrane subunit [Mesorhizobium opportunistum WSM2075] Length = 269 Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 47/172 (27%), Positives = 85/172 (49%), Gaps = 6/172 (3%) Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY----IALSCYTAAFIAE 283 +I G P L+ + L Y + + Q+ +I S + P + +AL+ A + E Sbjct: 98 VIRGTPLLIQLWLLY--YGLGSLFPQYPWIRESWMWPYLRQAWPYGVLALTLSFAGYEGE 155 Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343 ++R VP+GQ+EAA A G++ K R + LPQA +P LT + + LK++ L Sbjct: 156 VMRGAFAGVPKGQLEAARAFGMSRWKIFRRIWLPQAFYRALPTLTGETVLQLKSTPLVAT 215 Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395 + D+ +V + T E +L+ IY++++ ++ R+ A+I K Sbjct: 216 ISVIDIFAVSSKVRQDTYLTYEPLLLLALIYMTITGILVFAFGRIEARIPNK 267 >gi|160943011|ref|ZP_02090249.1| hypothetical protein FAEPRAM212_00488 [Faecalibacterium prausnitzii M21/2] gi|158445705|gb|EDP22708.1| hypothetical protein FAEPRAM212_00488 [Faecalibacterium prausnitzii M21/2] Length = 227 Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 39/133 (29%), Positives = 75/133 (56%), Gaps = 7/133 (5%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + IA + A+ AE +R L +VP+GQ+EA +G++ + R ++LPQA+R+ +P Sbjct: 95 FPAAVIAFAFNEGAYCAETMRGALESVPQGQLEAGYCVGMSWWQIMRRIVLPQALRTAVP 154 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 L++ + ++K++SLA + A+L G + +T I++ IY ++++ LF Sbjct: 155 ALSNSLIGMIKDTSLASNITVAELFMAGQRVAART-------YIFLPIYCEVAVVYLLFC 207 Query: 386 NRLNAKIALKEKK 398 + AL E++ Sbjct: 208 TVITKLQALLERQ 220 >gi|86149175|ref|ZP_01067407.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Campylobacter jejuni subsp. jejuni CF93-6] gi|85840533|gb|EAQ57790.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Campylobacter jejuni subsp. jejuni CF93-6] Length = 233 Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 54/209 (25%), Positives = 106/209 (50%), Gaps = 18/209 (8%) Query: 191 VFSFVLG---IVLSLFATRLSRHFHE---KTGKALPLLYISTFLIFGLPTLVLIALKYQL 244 +FS ++G I++S F ++ + + + + PLL FL + LP K+ + Sbjct: 29 IFSLIIGLFCILMSYFKIKILENICKLYIEFSRNTPLLIQLFFLYYALP-------KFNI 81 Query: 245 HFDK-PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 H ++ P L T+ P F + LS +++AE +R+G A+ + Q EA ++L Sbjct: 82 HLEQIPPLDLICLSIEETLRPSFACAIVGLSFLGGSYMAESLRAGFEAIRKQQFEAGLSL 141 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363 G + R V+LPQA+ +P +++ + L+K +S+ + DLV++ ++ + T + Sbjct: 142 GFSKFGNLRYVILPQALAISMPSISANIIFLIKETSVVSIIALPDLVNLMKSLNSLTYKT 201 Query: 364 IEIILI----WMFIYLSLSIMIALFMNRL 388 E++ + ++ I L LS ++ F RL Sbjct: 202 DELLFLLFMGYLCIILPLSFILLKFEKRL 230 Score = 38.1 bits (87), Expect = 2.6, Method: Compositional matrix adjust. Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 4/75 (5%) Query: 82 DSSYATAILVGFVNTFWL----AFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137 D + A F+ WL +F G+I + IIG K++ IC++Y+E R Sbjct: 2 DFDFILAQAPAFLTAAWLTIKLSFFGIIFSLIIGLFCILMSYFKIKILENICKLYIEFSR 61 Query: 138 NIPPLVVIFFLYKSV 152 N P L+ +FFLY ++ Sbjct: 62 NTPLLIQLFFLYYAL 76 >gi|239816392|ref|YP_002945302.1| polar amino acid ABC transporter inner membrane subunit [Variovorax paradoxus S110] gi|239802969|gb|ACS20036.1| polar amino acid ABC transporter, inner membrane subunit [Variovorax paradoxus S110] Length = 223 Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 37/111 (33%), Positives = 68/111 (61%), Gaps = 1/111 (0%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G SP+ +L +A+ A+ EI+R+G+ ++P+GQ+EA AL L + R V++ Sbjct: 84 GLRWSPQTAAL-VAMVVNLGAYATEIIRAGIESIPKGQIEAGRALNLKPWEIFRFVIIKP 142 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369 A+++I P LTSQ++ L+ +S++ + DL SV + +QT ++ EI ++ Sbjct: 143 ALKAIYPALTSQFILLMLSSAVVSVISADDLTSVAANLQSQTFRSFEIYIV 193 >gi|170696019|ref|ZP_02887157.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia graminis C4D1M] gi|170139099|gb|EDT07289.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia graminis C4D1M] Length = 225 Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 55/199 (27%), Positives = 98/199 (49%), Gaps = 14/199 (7%) Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252 SF +G+ L+ F L R F K A Y+ +L G P LV + + + + P +G Sbjct: 30 SFAIGLALA-FIVALVRLFGPKWAVAAVRFYV--WLFRGSPLLVQL---FVIFYGLPNVG 83 Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312 V + I S A+ +E++R + ++P+GQ EAA ++G+T +A R Sbjct: 84 --------IVLDPLTAAIIGFSLNVGAYNSEVIRGVIESIPKGQWEAAYSMGMTREQALR 135 Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372 +LPQA R +PPL++ ++ L+K++SLA + ++ I + T + + + Sbjct: 136 RAILPQATRVALPPLSNSFIALVKDTSLAAVLTVPEVFQAAQRIASVTYEPLILYTEAAL 195 Query: 373 IYLSLSIMIALFMNRLNAK 391 +YL S +++ RL K Sbjct: 196 VYLLFSSVLSSAQVRLERK 214 >gi|116250818|ref|YP_766656.1| transmembrane component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] gi|115255466|emb|CAK06542.1| putative transmembrane component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] Length = 230 Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 62/210 (29%), Positives = 107/210 (50%), Gaps = 23/210 (10%) Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL---YISTFLIF-GLPTLVLIALKY-- 242 IFVFS ++G SLFA R +PLL ++ ++F G+P +++I L Y Sbjct: 28 IFVFSTIVG---SLFAMVEYRR--------VPLLRELVVAYKVVFKGVPMVIVIFLAYYG 76 Query: 243 ---QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299 L F ++G ++ G ST P +++L +AL+ AAF AE+V+ L + GQ +A Sbjct: 77 LPPTLQFLTSLVG-IDYNGHST--PNWITLIVALTACVAAFQAEVVKGALNSFDNGQADA 133 Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359 A +LG + R V+LPQ + + IP L + + ++K SL A+ D+ + Sbjct: 134 AYSLGYKRSQLFRRVMLPQVIVAAIPDLANSIMVIMKALSLGFAIEVVDIFAQSQLTAAL 193 Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 +E LI + IY+ ++ ++ +R+ Sbjct: 194 NFYYLEAFLIAVVIYMVIAYIVTYAADRME 223 >gi|327184148|gb|AEA32595.1| amino acid ABC transporter permease [Lactobacillus amylovorus GRL 1118] Length = 215 Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 38/128 (29%), Positives = 69/128 (53%), Gaps = 1/128 (0%) Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321 V P + + A AA+ AEI R G ++ +GQ EAA L L + +++PQ ++ Sbjct: 82 VFPRYQAALFAFVLNYAAYFAEIFRGGFQSIDQGQFEAAQVLHLNRWQTMTKIVIPQVIK 141 Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 ++P + ++ +NL+K+SSL +G DL+ G + + + ++L+ + IYL L + Sbjct: 142 IVLPSIGNEVINLVKDSSLVYVIGLGDLLRAGNVAMARDVTLVPLVLVGV-IYLFLISIC 200 Query: 382 ALFMNRLN 389 A + RL Sbjct: 201 AFILKRLE 208 >gi|314922832|gb|EFS86663.1| conserved hypothetical protein [Propionibacterium acnes HL001PA1] gi|314966263|gb|EFT10362.1| conserved hypothetical protein [Propionibacterium acnes HL082PA2] gi|314980789|gb|EFT24883.1| conserved hypothetical protein [Propionibacterium acnes HL110PA3] gi|315090238|gb|EFT62214.1| conserved hypothetical protein [Propionibacterium acnes HL110PA4] gi|315093427|gb|EFT65403.1| conserved hypothetical protein [Propionibacterium acnes HL060PA1] gi|327327044|gb|EGE68825.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Propionibacterium acnes HL103PA1] Length = 198 Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 50/152 (32%), Positives = 77/152 (50%), Gaps = 4/152 (2%) Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287 + +GL ++ L ++ F P QF I V + I L A++ EI RS Sbjct: 1 MFWGLLAVLYPTLPIEVPFGGP---QFASIETEQVVTTLATTIIGLDLNENAYLTEITRS 57 Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347 GL +V GQ EAA LG+ R V++PQ MR II PL ++ + +LK +SL +AV F Sbjct: 58 GLESVDVGQTEAAKTLGMKPSLIMRRVIIPQPMRVIILPLGNETIGMLKTTSLVLAVPFT 117 Query: 348 -DLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378 DL + N+ I ++++ F YL ++ Sbjct: 118 LDLQYATSAMANRIYAPIPLLVVTAFWYLVMT 149 >gi|309390079|gb|ADO77959.1| amino acid ABC transporter membrane protein 2, PAAT family [Halanaerobium praevalens DSM 2228] Length = 214 Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 32/118 (27%), Positives = 68/118 (57%) Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 + + AE +R + ++ Q++AA ++G+T + R ++LPQA+R +IP T++++ ++K Sbjct: 96 SGVYQAEYLRGSIQSISGSQLKAAQSIGMTKWQGIRYIILPQALRRVIPAWTNEFIYMIK 155 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394 SSLA +G +L++ + ++ Q + + IYL++ + NRL K+ + Sbjct: 156 YSSLAYVIGAKELMTEAKLLASRNYQFFNVYFLVALIYLAVIMFFVYLFNRLEKKVTI 213 Score = 38.1 bits (87), Expect = 2.4, Method: Compositional matrix adjust. Identities = 19/67 (28%), Positives = 36/67 (53%) Query: 83 SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142 S Y L G T ++ TI+G+L+ G++ NK+++ + R+++ + R P L Sbjct: 6 SEYYPLFLRGLGVTVFVTIISCFSGTILGSLLALGKIYGNKVISTLVRIFISIIRGTPLL 65 Query: 143 VVIFFLY 149 V +F +Y Sbjct: 66 VQLFIIY 72 >gi|167850428|ref|ZP_02475936.1| ABC-type polar amino acid transport system, ATPase component [Burkholderia pseudomallei B7210] Length = 302 Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 47/141 (33%), Positives = 81/141 (57%), Gaps = 6/141 (4%) Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH-RKATRLVLLPQAM 320 +SP F + + L+ AAF AE +R G+++V +GQ+EAA ALGL R+ATR+V LPQAM Sbjct: 151 ISP-FCAAVLGLTLNHAAFAAEGIRGGILSVDQGQLEAAAALGLPRARQATRIV-LPQAM 208 Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL---IWMFIYLSL 377 R+ +P + + L K SS+ + +L I + + I +++ +W I L++ Sbjct: 209 RAFLPVAFNDLIALAKGSSMVYVLAMPELFYTVQVIYRRNLEVIPLLMVATVWYLIILTV 268 Query: 378 SIMIALFMNRLNAKIALKEKK 398 ++ + R A+ A++E + Sbjct: 269 LSIVQAQVERRYARGAVREPE 289 >gi|116070916|ref|ZP_01468185.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Synechococcus sp. BL107] gi|116066321|gb|EAU72078.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Synechococcus sp. BL107] Length = 324 Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 40/116 (34%), Positives = 67/116 (57%), Gaps = 3/116 (2%) Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339 +IAE VR GL A+ Q EAA+ LGL+ R+ +LV+LPQA R +P LT+Q + LL+N+S Sbjct: 202 YIAEDVRGGLQAISPTQREAAMVLGLSPRQTLQLVVLPQAFRVALPSLTNQAVGLLQNTS 261 Query: 340 LAVAVGFADLVSVGGTIINQT---GQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 L +G +L+ + +++ G+ +E+ + +Y +AL L ++ Sbjct: 262 LMAILGLVELLGISRSLLANPEFIGRYLEVYIWLAAVYWLACTAMALLARHLEIQL 317 >gi|77457436|ref|YP_346941.1| amino acid ABC transporter permease [Pseudomonas fluorescens Pf0-1] gi|77381439|gb|ABA72952.1| amino acid ABC transporter membrane protein 1, PAAT family [Pseudomonas fluorescens Pf0-1] Length = 242 Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 50/151 (33%), Positives = 74/151 (49%), Gaps = 2/151 (1%) Query: 226 TFLIFGLPTLVLIALK-YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284 T LI G+P LVL+ L Y L L + + P F + + L A+ E Sbjct: 67 TTLIRGVPDLVLMLLIFYSLQTWLTTLTDYLEWEYIEIDP-FSAGVLTLGFIYGAYFTET 125 Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344 R ++AVPRGQ+EAA A GL + R V+ PQ MR +P + + ++ +LK ++L + Sbjct: 126 FRGAILAVPRGQVEAATAYGLKRGQRFRFVVFPQMMRFALPGIGNNWMVMLKATALVSII 185 Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYL 375 G ADLV T Q +++ IYL Sbjct: 186 GLADLVKAAQDAGKSTYQLFYFLVLAALIYL 216 >gi|302522780|ref|ZP_07275122.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces sp. SPB78] gi|318059837|ref|ZP_07978560.1| putative glutamate ABC transporter permease protein [Streptomyces sp. SA3_actG] gi|318077306|ref|ZP_07984638.1| putative glutamate ABC transporter permease protein [Streptomyces sp. SA3_actF] gi|302431675|gb|EFL03491.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces sp. SPB78] Length = 298 Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 39/131 (29%), Positives = 74/131 (56%), Gaps = 1/131 (0%) Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327 +L L+ Y + +AE+ RSG+ +V RGQ EAA ALG+ + +L+PQA+R+++P + Sbjct: 143 ALVTGLTLYNGSVLAEVFRSGIASVDRGQREAAYALGMRKTQVMAYILIPQAVRAMLPSI 202 Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387 SQ + LK++SL + + + + G I + + I + M I + I + + ++ Sbjct: 203 ISQLVVALKDTSLGYLITYEEFLHAGKLIASNLDYDLPFIPVVMVIS-PVYIGMCMLLSW 261 Query: 388 LNAKIALKEKK 398 L +A +E++ Sbjct: 262 LAQGLARRERR 272 Score = 40.4 bits (93), Expect = 0.46, Method: Compositional matrix adjust. Identities = 21/43 (48%), Positives = 29/43 (67%), Gaps = 1/43 (2%) Query: 117 GRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIP 159 GRLS ++LV W VE FR +P LV+IFF++ + L V P+P Sbjct: 101 GRLSEHRLVRWPATALVEFFRAMPVLVMIFFVFIA-LKVQPLP 142 >gi|170749710|ref|YP_001755970.1| polar amino acid ABC transporter, inner membrane subunit [Methylobacterium radiotolerans JCM 2831] gi|170656232|gb|ACB25287.1| polar amino acid ABC transporter, inner membrane subunit [Methylobacterium radiotolerans JCM 2831] Length = 249 Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 45/117 (38%), Positives = 70/117 (59%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I+LS + AF EI RSG+ AVPR +EAA ALG T KA R V+LP A+R +P L + Sbjct: 121 ISLSLFAGAFNVEIFRSGIEAVPRTTVEAAEALGYTRFKAYRYVVLPLALRVCLPALNNN 180 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387 +NLLK ++LA A+ + + I +++ +E++L+ + Y L ++ M+R Sbjct: 181 LINLLKTTTLAYAIAVPETLYAVKQIWSESQNVLEMMLVLLATYAVLVGVLVWIMHR 237 Score = 38.1 bits (87), Expect = 2.7, Method: Compositional matrix adjust. Identities = 29/94 (30%), Positives = 44/94 (46%), Gaps = 5/94 (5%) Query: 64 LSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK 123 L E GF PY D A G T L S ++ + +IG + + ++ Sbjct: 12 LYETTGFNFTVFYDPYDWDRYVA-----GLRMTLLLGISTILASLVIGAVGALLQSGPSR 66 Query: 124 LVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLP 157 ++ + +V VFRN PPLV IFF Y + ++LP Sbjct: 67 VLRALVNGFVVVFRNTPPLVQIFFFYFGLGTLLP 100 >gi|220923580|ref|YP_002498882.1| polar amino acid ABC transporter inner membrane subunit [Methylobacterium nodulans ORS 2060] gi|219948187|gb|ACL58579.1| polar amino acid ABC transporter, inner membrane subunit [Methylobacterium nodulans ORS 2060] Length = 223 Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 38/111 (34%), Positives = 70/111 (63%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +AL A+ EI+R+G+ ++ GQ+EA +LGL + R V+L A+++I P LTSQ Sbjct: 95 LALVVNVGAYGIEIIRAGIDSIDPGQIEAGKSLGLKPLQIFRYVVLKPAIQAIYPALTSQ 154 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 ++ L+ NSS+ A+ ++L + G I ++ ++ E+ L+ IY +LS+++ Sbjct: 155 FILLMLNSSVCSAIAASELTAAAGDIQSRNFRSFEVYLVVTGIYFALSVVL 205 >gi|115351570|ref|YP_773409.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia ambifaria AMMD] gi|115281558|gb|ABI87075.1| amino acid ABC transporter membrane protein 2, PAAT family [Burkholderia ambifaria AMMD] Length = 241 Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 35/96 (36%), Positives = 58/96 (60%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P ++ AL+ A++A V +G++A GQ +A ++LGLT + R VLLPQA+R + Sbjct: 94 PGLATVVCALALIGGAYLAHAVHAGIVAAGDGQWQAGLSLGLTRWQTVRYVLLPQAIRIM 153 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359 P +Q++ L+K++SLA VG +L V + N+ Sbjct: 154 TPSFVNQWVALVKDTSLAYIVGVPELSFVATQVNNR 189 >gi|315039015|ref|YP_004032583.1| amino acid ABC transporter, permease protein [Lactobacillus amylovorus GRL 1112] gi|325957440|ref|YP_004292852.1| amino acid ABC transporter permease [Lactobacillus acidophilus 30SC] gi|312277148|gb|ADQ59788.1| Amino acid ABC transporter, permease protein [Lactobacillus amylovorus GRL 1112] gi|325334005|gb|ADZ07913.1| amino acid ABC transporter, permease protein [Lactobacillus acidophilus 30SC] Length = 219 Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 38/128 (29%), Positives = 69/128 (53%), Gaps = 1/128 (0%) Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321 V P + + A AA+ AEI R G ++ +GQ EAA L L + +++PQ ++ Sbjct: 86 VFPRYQAALFAFVLNYAAYFAEIFRGGFQSIDQGQFEAAQVLHLNRWQTMTKIVIPQVIK 145 Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 ++P + ++ +NL+K+SSL +G DL+ G + + + ++L+ + IYL L + Sbjct: 146 IVLPSIGNEVINLVKDSSLVYVIGLGDLLRAGNVAMARDVTLVPLVLVGV-IYLFLISIC 204 Query: 382 ALFMNRLN 389 A + RL Sbjct: 205 AFILKRLE 212 >gi|289426755|ref|ZP_06428483.1| conserved hypothetical protein [Propionibacterium acnes J165] gi|289160081|gb|EFD08257.1| conserved hypothetical protein [Propionibacterium acnes J165] gi|314979159|gb|EFT23253.1| conserved hypothetical protein [Propionibacterium acnes HL072PA2] gi|315089120|gb|EFT61096.1| conserved hypothetical protein [Propionibacterium acnes HL072PA1] Length = 182 Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 43/109 (39%), Positives = 62/109 (56%), Gaps = 1/109 (0%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I L A++AEI RSGL +V GQ EAA ALG+ R ++PQAMR IIPP ++ Sbjct: 25 IGLGLNEGAYLAEITRSGLESVDVGQTEAAKALGMKPSLIMRRTIIPQAMRVIIPPPGNE 84 Query: 331 YLNLLKNSSLAVAVGFA-DLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378 + +LK +SL +A+ F DL I N T I ++++ YL ++ Sbjct: 85 TIGMLKTTSLVLALPFTLDLQYATSAIANCTYAPIPLLVVAACWYLVMT 133 >gi|152987100|ref|YP_001348448.1| putative amino acid permease [Pseudomonas aeruginosa PA7] gi|150962258|gb|ABR84283.1| probable amino acid permease [Pseudomonas aeruginosa PA7] Length = 225 Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 42/129 (32%), Positives = 70/129 (54%), Gaps = 1/129 (0%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P ++ ALS A++A V +G+ ++P GQ AA ALGL + RLV+LPQA+ + Sbjct: 94 PALATVVCALSLIGGAYLAHSVYAGIHSLPAGQWAAARALGLRPWQVLRLVILPQALPVM 153 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG-QAIEIILIWMFIYLSLSIMIA 382 +P +Q+++L+K++SLA +G +L V + N+ EI L +Y + Sbjct: 154 LPSFLNQWVSLIKDTSLAYVIGVGELSFVATQVSNRVMVHPTEIFLFVALLYFLFCTSLD 213 Query: 383 LFMNRLNAK 391 LF L+ + Sbjct: 214 LFAGFLSRR 222 >gi|90410449|ref|ZP_01218465.1| Putative arginine ABC transporter, permease protein [Photobacterium profundum 3TCK] gi|90328690|gb|EAS44974.1| Putative arginine ABC transporter, permease protein [Photobacterium profundum 3TCK] Length = 229 Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 38/89 (42%), Positives = 59/89 (66%), Gaps = 1/89 (1%) Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321 +SP F+S +ALS A++ A+ +R L AV GQ EAA ALG++ + ++LPQA+R Sbjct: 87 ISP-FVSGVVALSLIFASYAAQTIRGALKAVNNGQREAASALGISKAHSFFRIILPQAVR 145 Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 +P LT+Q+L LLK+++L +G DL+ Sbjct: 146 HALPGLTNQWLVLLKDTALVSLIGVTDLL 174 Score = 40.4 bits (93), Expect = 0.45, Method: Compositional matrix adjust. Identities = 17/67 (25%), Positives = 39/67 (58%) Query: 83 SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142 S Y+ +++ T LAF+ ++ ++ + +G +S ++LVAW +V + R +P + Sbjct: 4 SGYSMSLVEASWMTIQLAFTSLLVGLVLAVIFASGEMSRSRLVAWPTTAFVTILRGLPEI 63 Query: 143 VVIFFLY 149 +V+ F++ Sbjct: 64 LVVLFIF 70 >gi|29828502|ref|NP_823136.1| glutamate transporter permease [Streptomyces avermitilis MA-4680] gi|29605605|dbj|BAC69671.1| putative glutamate ABC transporter permease [Streptomyces avermitilis MA-4680] Length = 296 Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 38/127 (29%), Positives = 72/127 (56%), Gaps = 3/127 (2%) Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327 +L L+ Y + +AE+ RSG+ +V RGQ EAA ALG+ + VL+PQA+R+++P + Sbjct: 138 ALVAGLTLYNGSVLAEVFRSGVESVERGQREAAFALGMRKTQVMAHVLVPQAVRAMLPAI 197 Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF---IYLSLSIMIALF 384 SQ + LK++SL + + + + G I + + I + M IY+ + ++++ F Sbjct: 198 ISQLVVALKDTSLGYLITYEEFLHAGKLIASNLDYDLPFIPVVMVISPIYIGMCMLLSWF 257 Query: 385 MNRLNAK 391 ++ + Sbjct: 258 AQWVSRR 264 Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust. Identities = 20/43 (46%), Positives = 29/43 (67%), Gaps = 1/43 (2%) Query: 117 GRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIP 159 GRLS + V W+ + VE FR +P LV+IFF++ + L V P+P Sbjct: 96 GRLSDHAPVRWVATLVVEFFRAMPVLVMIFFIFVA-LKVQPLP 137 >gi|53719420|ref|YP_108406.1| putative amino acid transport system, membrane protein [Burkholderia pseudomallei K96243] gi|121598906|ref|YP_992992.1| ABC transporter, permease protein [Burkholderia mallei SAVP1] gi|254178126|ref|ZP_04884781.1| ABC polar amino acid transporter, inner membrane subunit [Burkholderia mallei ATCC 10399] gi|52209834|emb|CAH35806.1| putative amino acid transport system, membrane protein [Burkholderia pseudomallei K96243] gi|121227716|gb|ABM50234.1| ABC transporter, permease protein [Burkholderia mallei SAVP1] gi|160699165|gb|EDP89135.1| ABC polar amino acid transporter, inner membrane subunit [Burkholderia mallei ATCC 10399] Length = 247 Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 37/96 (38%), Positives = 58/96 (60%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P ++ ALS A++A V +G+ A GQ +A +ALGLT + R VLLPQA+R + Sbjct: 94 PGLAAVVCALSLVGGAYLAHSVHAGIRAAGDGQWQAGLALGLTRWQTVRHVLLPQAVRIM 153 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359 P +Q+++L+K++SLA VG +L V + N+ Sbjct: 154 TPSFVNQWVSLVKDTSLAYIVGVPELSFVATQVNNR 189 >gi|56808075|ref|ZP_00365870.1| COG0765: ABC-type amino acid transport system, permease component [Streptococcus pyogenes M49 591] Length = 219 Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 33/91 (36%), Positives = 54/91 (59%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +A + AA+ AEI R G+ A+P+GQ EAA L L + R ++LPQ + ++P + ++ Sbjct: 95 LAFTLNYAAYFAEIFRGGIEAIPKGQYEAAKVLKLKPLQTIRYIILPQVFKIVLPSVFNE 154 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361 +NL+K+SSL +G DL+ T N+ Sbjct: 155 VINLVKDSSLVYVLGVGDLLLASKTAANRDA 185 >gi|317049371|ref|YP_004117019.1| polar amino acid ABC transporter inner membrane subunit [Pantoea sp. At-9b] gi|316950988|gb|ADU70463.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea sp. At-9b] Length = 216 Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 54/170 (31%), Positives = 89/170 (52%), Gaps = 13/170 (7%) Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281 LY+S L+ G P +V + + + F P LG +GG ++ +A+ + A++ Sbjct: 56 LYVS--LMRGTPAIVQL---FVVFFTLPRLG----LGGQ----PMLAAVVAIGLNSGAYV 102 Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341 AEI+R V RGQ+EAA LGL+ V+ PQ MR+ +P L +++ LLK + LA Sbjct: 103 AEILRVNRSLVTRGQLEAARTLGLSRALTWWYVINPQVMRASLPMLVNEFTILLKTTPLA 162 Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 V +L G +I +T A +++L+ YL +++ + RL AK Sbjct: 163 SVVALTELTYAGQIVIARTYDATQVLLLVAAGYLVIALPLISAARRLEAK 212 >gi|239834626|ref|ZP_04682954.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium LMG 3301] gi|239822689|gb|EEQ94258.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium LMG 3301] Length = 216 Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 64/205 (31%), Positives = 101/205 (49%), Gaps = 22/205 (10%) Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249 F F + G+V++L T R + L YI F G P L+ + + ++F P Sbjct: 28 FTFGGMGGLVVALGRTSAKRWL-----RYLMATYIQIFQ--GTPLLIQL---FFVYFGLP 77 Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309 +LG I +++L I LS + +AF+ EI R + AV GQ EAA ALG+ + Sbjct: 78 ILGIRVDI--------WVALIIGLSLHASAFLGEIWRGSIQAVSTGQDEAARALGIGYFH 129 Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII-- 367 + V+LPQA R +P +NL+K ++LA +G +L G + N T + +++ Sbjct: 130 RMKDVVLPQAFRIGLPATIGFLVNLIKGTALAALLGLTELTRSGQLMANITFEPMKVYGT 189 Query: 368 --LIWMFIYLSLSIMIALFMNRLNA 390 LI+ I + L+ A RLNA Sbjct: 190 VGLIYFIICVPLTYYSARIEKRLNA 214 >gi|257070103|ref|YP_003156358.1| amino acid ABC transporter membrane protein [Brachybacterium faecium DSM 4810] gi|256560921|gb|ACU86768.1| amino acid ABC transporter membrane protein [Brachybacterium faecium DSM 4810] Length = 232 Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 43/116 (37%), Positives = 67/116 (57%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P F + L+ +AAF+ E VRSG+ VP G EAA ++GL RLV+LPQA RS+ Sbjct: 82 PYFWCGVLGLTLSSAAFVCENVRSGINTVPIGHAEAARSIGLGFFGTLRLVVLPQAFRSM 141 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379 + PL + ++ + S+L A+ ++ V T+ + QA+ + LI +YL LS+ Sbjct: 142 VQPLVNVFIGTVIGSALCSAIAVQEVTWVTQTLNIRYAQAVLMFLIAGAVYLILSL 197 >gi|261339173|ref|ZP_05967031.1| hypothetical protein ENTCAN_05397 [Enterobacter cancerogenus ATCC 35316] gi|288319018|gb|EFC57956.1| arginine ABC transporter, permease protein ArtQ [Enterobacter cancerogenus ATCC 35316] Length = 238 Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 55/187 (29%), Positives = 96/187 (51%), Gaps = 10/187 (5%) Query: 217 KALPLLYISTFLIFGLPTLVLI---ALKYQLHFDK-PVLGQF-NFIGGSTVSPEFMSLYI 271 + LP + + F+ FG L+L L F + PV Q NF VSP F+ I Sbjct: 55 RGLPEILVVLFIYFGSSQLLLTLSDGFNINLGFAQIPVQMQIENF----DVSP-FLCGVI 109 Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 ALS +A+ ++ +R L AVP+GQ E+ ALGL+ +++PQ R +P L +Q+ Sbjct: 110 ALSLLYSAYASQTLRGALKAVPQGQWESGQALGLSKAAIFFRLVMPQMWRHALPGLGNQW 169 Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 L LLK+++L + DL+ +I +T + ++ IYL ++++ + R++ + Sbjct: 170 LVLLKDTALVSLISVNDLMLQTKSIATRTQEPFTWYIVAAAIYLVITLLSQYILKRIDLR 229 Query: 392 IALKEKK 398 E++ Sbjct: 230 ATRFERR 236 >gi|319792872|ref|YP_004154512.1| polar amino acid ABC transporter, inner membrane subunit [Variovorax paradoxus EPS] gi|315595335|gb|ADU36401.1| polar amino acid ABC transporter, inner membrane subunit [Variovorax paradoxus EPS] Length = 223 Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 37/111 (33%), Positives = 68/111 (61%), Gaps = 1/111 (0%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G SP+ +L +A+ A+ EI+R+G+ ++P+GQ+EA AL L + R V++ Sbjct: 84 GLRWSPQTAAL-VAMVVNLGAYATEIIRAGIESIPKGQIEAGRALNLKPWEIFRFVIIKP 142 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369 A+++I P LTSQ++ L+ +S++ + DL SV + +QT ++ EI ++ Sbjct: 143 ALKAIYPALTSQFILLMLSSAVVSVISADDLTSVAANLQSQTFRSFEIYIV 193 >gi|307727081|ref|YP_003910294.1| ectoine/hydroxyectoine ABC transporter permease EhuC [Burkholderia sp. CCGE1003] gi|307587606|gb|ADN61003.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC [Burkholderia sp. CCGE1003] Length = 219 Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 38/123 (30%), Positives = 67/123 (54%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + L + A+ +EI+R L +VP GQ EAA+AL ++ R ++LPQAM + +PP T+ Sbjct: 88 VGLGLHYGAYGSEILRGALRSVPGGQFEAALALNMSPLTRMRRIVLPQAMINALPPATNL 147 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 + LLK +SL + +DL + T + EI ++ + IY L+ ++ M Sbjct: 148 MIELLKGTSLVSLITLSDLTFRARQLDEATFKTAEIFMLTLVIYFVLAQILVALMRHFER 207 Query: 391 KIA 393 +++ Sbjct: 208 RVS 210 >gi|167923549|ref|ZP_02510640.1| ABC-type polar amino acid transport system, ATPase component [Burkholderia pseudomallei BCC215] Length = 324 Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 47/141 (33%), Positives = 81/141 (57%), Gaps = 6/141 (4%) Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH-RKATRLVLLPQAM 320 +SP F + + L+ AAF AE +R G+++V +GQ+EAA ALGL R+ATR+V LPQAM Sbjct: 164 ISP-FCAAVLGLTLNHAAFAAEGIRGGILSVDQGQLEAAAALGLPRARQATRIV-LPQAM 221 Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL---IWMFIYLSL 377 R+ +P + + L K SS+ + +L I + + I +++ +W I L++ Sbjct: 222 RAFLPVAFNDLIALAKGSSMVYVLAMPELFYTVQVIYRRNLEVIPLLMVATVWYLIILTV 281 Query: 378 SIMIALFMNRLNAKIALKEKK 398 ++ + R A+ A++E + Sbjct: 282 LSIVQAQVERRYARGAVREPE 302 >gi|187919665|ref|YP_001888696.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia phytofirmans PsJN] gi|187718103|gb|ACD19326.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia phytofirmans PsJN] Length = 218 Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 38/140 (27%), Positives = 73/140 (52%), Gaps = 1/140 (0%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G VSP +++ + L+ YT+A++ +I R + AVPRGQ A +LG+T + R ++ PQ Sbjct: 80 GVDVSP-WVAATVTLTLYTSAYLVDIWRGCVEAVPRGQWSAGASLGMTFGQQLRYIVWPQ 138 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378 A + + P + ++K+++LA +GF +L G I N + I + IY ++ Sbjct: 139 ARKIAVAPTVGFLVQVVKSTALASIIGFTELTKTGTMITNAAFRPFPIYGMVAMIYFAMC 198 Query: 379 IMIALFMNRLNAKIALKEKK 398 + + L + + + + Sbjct: 199 FPLTWYARVLEKRQKVGQHR 218 >gi|313808161|gb|EFS46635.1| conserved hypothetical protein [Propionibacterium acnes HL087PA2] gi|313818928|gb|EFS56642.1| conserved hypothetical protein [Propionibacterium acnes HL046PA2] gi|313820757|gb|EFS58471.1| conserved hypothetical protein [Propionibacterium acnes HL036PA1] gi|313822478|gb|EFS60192.1| conserved hypothetical protein [Propionibacterium acnes HL036PA2] gi|313825726|gb|EFS63440.1| conserved hypothetical protein [Propionibacterium acnes HL063PA1] gi|314925672|gb|EFS89503.1| conserved hypothetical protein [Propionibacterium acnes HL036PA3] gi|314959775|gb|EFT03877.1| conserved hypothetical protein [Propionibacterium acnes HL002PA2] gi|314986713|gb|EFT30805.1| conserved hypothetical protein [Propionibacterium acnes HL005PA2] gi|314989456|gb|EFT33547.1| conserved hypothetical protein [Propionibacterium acnes HL005PA3] gi|315084061|gb|EFT56037.1| conserved hypothetical protein [Propionibacterium acnes HL027PA2] gi|315085263|gb|EFT57239.1| conserved hypothetical protein [Propionibacterium acnes HL002PA3] gi|327330517|gb|EGE72264.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Propionibacterium acnes HL096PA3] gi|327446854|gb|EGE93508.1| hypothetical protein HMPREF9568_00811 [Propionibacterium acnes HL013PA2] gi|328752530|gb|EGF66146.1| hypothetical protein HMPREF9563_02260 [Propionibacterium acnes HL020PA1] Length = 182 Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 43/109 (39%), Positives = 62/109 (56%), Gaps = 1/109 (0%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I L A++AEI RSGL +V GQ EAA ALG+ R ++PQAMR IIPP ++ Sbjct: 25 IGLGLNEGAYLAEITRSGLESVDVGQTEAAKALGMKPSLIMRRAIIPQAMRVIIPPPGNE 84 Query: 331 YLNLLKNSSLAVAVGFA-DLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378 + +LK +SL +A+ F DL I N T I ++++ YL ++ Sbjct: 85 TIGMLKTTSLVLALPFTLDLQYATSAIANCTYAPIPLLVVAACWYLVMT 133 >gi|257125147|ref|YP_003163261.1| polar amino acid ABC transporter inner membrane protein [Leptotrichia buccalis C-1013-b] gi|257049086|gb|ACV38270.1| polar amino acid ABC transporter, inner membrane subunit [Leptotrichia buccalis C-1013-b] Length = 225 Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 56/215 (26%), Positives = 100/215 (46%), Gaps = 34/215 (15%) Query: 191 VFSFVLGIVLSLFATRLSR------HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244 VFS +LG++L + T ++ F+ ++ + +PLL + FG +A + L Sbjct: 34 VFSILLGLILGIVMTSKNKIIYGVLKFYLESMRIIPLLVWLFIIYFG------VAKGFDL 87 Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304 H D + I + A + +IVR +I++P+ Q E+A ALG Sbjct: 88 HIDSET-----------------TTIIVFVIWGTAEMMDIVRGAIISLPKIQGESAKALG 130 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364 L + R VLLPQA+R I P + ++K +SLA+ + A+++ +G II + + Sbjct: 131 LDTIQVYRYVLLPQAVRRIAPAAVNLITRMIKTTSLAIFIEVAEVLKIGRQIIEFSSRKN 190 Query: 365 EIILIWM-----FIYLSLSIMIALFMNRLNAKIAL 394 + W+ F+Y + I L ++ K A+ Sbjct: 191 PMAPFWVYLFIFFLYFIICYPITLLSKKMEKKWAV 225 >gi|34498542|ref|NP_902757.1| histidine transport system membrane protein M [Chromobacterium violaceum ATCC 12472] gi|34104398|gb|AAQ60756.1| histidine transport system membrane protein M [Chromobacterium violaceum ATCC 12472] Length = 221 Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 40/145 (27%), Positives = 75/145 (51%), Gaps = 4/145 (2%) Query: 251 LGQFNFIGGSTVSPEFMSLYI----ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306 L QF+++ S Y+ A + TAA+ EI+ + A G++EAA ++G++ Sbjct: 67 LAQFDWVRDSWAWHYLQDAYVCAILAFTLNTAAYTTEIIAGQIRATHWGEIEAARSMGMS 126 Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 H R ++LP A+R +P +++ + +L+++++A V ADL V I +++ E Sbjct: 127 HWLMLRRIVLPSALRRALPAYSNEVIMMLQSTAIAGLVTLADLTGVARRIYSESYMPFEP 186 Query: 367 ILIWMFIYLSLSIMIALFMNRLNAK 391 L IYL+L+ + M R + Sbjct: 187 FLTAALIYLALTFALVWLMKRAERR 211 >gi|222081570|ref|YP_002540934.1| amino acid ABC transporter [Agrobacterium radiobacter K84] gi|221726249|gb|ACM29338.1| amino acid ABC transporter [Agrobacterium radiobacter K84] Length = 230 Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 61/216 (28%), Positives = 109/216 (50%), Gaps = 19/216 (8%) Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF-GLPTLVLIA 239 +T+ IF+ S ++G SLFA R L L ++ ++F G+P +++I Sbjct: 20 VTLAMALAIFILSTIVG---SLFAMAEYRRV-----PVLRELVVAYKIVFKGVPMVIVIF 71 Query: 240 LKY-----QLHFDKPVLG-QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293 L Y LHF ++G +FN G +T P +++L +AL+ AAF AE+V+ L + Sbjct: 72 LAYYGLPPALHFLSSLVGVEFN--GHAT--PNWVTLIVALTLCVAAFQAEVVKGALNSFD 127 Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353 GQ +AA +LG + R V+LPQ + + IP L + + ++K SL A+ D+ + Sbjct: 128 TGQADAAYSLGYKRSQLFRRVMLPQVIVAAIPDLANSIMVIMKALSLGFAIEVVDIFAQS 187 Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 +E LI + +Y+ ++ ++ +R+ Sbjct: 188 QLTAALNFYYLEAFLIAVVVYMVIAYVVTFAADRME 223 >gi|167899022|ref|ZP_02486423.1| ABC-type polar amino acid transport system, ATPase component [Burkholderia pseudomallei 7894] Length = 307 Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 47/141 (33%), Positives = 81/141 (57%), Gaps = 6/141 (4%) Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH-RKATRLVLLPQAM 320 +SP F + + L+ AAF AE +R G+++V +GQ+EAA ALGL R+ATR+V LPQAM Sbjct: 153 ISP-FCAAVLGLTLNHAAFAAEGIRGGILSVDQGQLEAAAALGLPRARQATRIV-LPQAM 210 Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL---IWMFIYLSL 377 R+ +P + + L K SS+ + +L I + + I +++ +W I L++ Sbjct: 211 RAFLPVAFNDLIALAKGSSMVYVLAMPELFYTVQVIYRRNLEVIPLLMVATVWYLIILTV 270 Query: 378 SIMIALFMNRLNAKIALKEKK 398 ++ + R A+ A++E + Sbjct: 271 LSIVQAQVERRYARGAVREPE 291 >gi|167719667|ref|ZP_02402903.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Burkholderia pseudomallei DM98] Length = 223 Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 47/143 (32%), Positives = 74/143 (51%), Gaps = 23/143 (16%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 +A+P+L + + F LP L LH D P L ++ ALS Sbjct: 66 RAIPVLMLIFWTYFLLPVL--------LHADVPGLA---------------AVVCALSLV 102 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 A++A V +G+ A GQ +A ++LGLT + R VLLPQA+R + P +Q+++L+K Sbjct: 103 GGAYLAHSVHAGIRAAGDGQWQAGLSLGLTRWQTVRHVLLPQAVRIMTPSFVNQWVSLVK 162 Query: 337 NSSLAVAVGFADLVSVGGTIINQ 359 ++SLA VG +L V + N+ Sbjct: 163 DTSLAYIVGVPELSFVATQVNNR 185 >gi|331700615|ref|YP_004397574.1| polar amino acid ABC transporter inner membrane subunit [Lactobacillus buchneri NRRL B-30929] gi|329127958|gb|AEB72511.1| polar amino acid ABC transporter, inner membrane subunit [Lactobacillus buchneri NRRL B-30929] Length = 229 Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 59/221 (26%), Positives = 104/221 (47%), Gaps = 32/221 (14%) Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240 +T+ A + +LGI+L + R F + + + LY+ F I +PT+VL+ L Sbjct: 24 VTVKIAAVALIVGLILGIILGVL-----RTFKNRPLRVVLRLYLEFFRI--VPTVVLLFL 76 Query: 241 KY-----QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295 Y QL+F+ P + +L AL + AA +++IVR LI+VP+ Sbjct: 77 FYYILPRQLNFNLP-------------GDQLATLVFAL--WVAAEMSDIVRGALISVPQH 121 Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355 Q E+ A+GL + R VL+PQA+ IP + ++K +SL + + D++++G Sbjct: 122 QRESGKAIGLNRYQLYRYVLIPQAISLEIPATINLATRVIKTTSLLMLISVMDVINIGQQ 181 Query: 356 IINQTGQAIEIILIWMF-----IYLSLSIMIALFMNRLNAK 391 II + W++ Y + ++ + RL K Sbjct: 182 IIEANNHTHPTGVFWVYGLIFLFYFLIDYPLSWWAKRLEKK 222 >gi|313497725|gb|ADR59091.1| Polar amino acid ABC transporter inner membrane subunit [Pseudomonas putida BIRD-1] Length = 232 Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 52/167 (31%), Positives = 83/167 (49%), Gaps = 11/167 (6%) Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL----YIALSCYTA 278 ++ T++I G P LV + L Y L QF + S P S +A T+ Sbjct: 56 WLYTYVIRGTPMLVQLFLIYY------GLAQFEAVRESIFWPLLSSATFCACLAFGINTS 109 Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338 A+ AEI+ L A P G++EAA A+G++ K R +LLP A+R +P +++ + +L+ + Sbjct: 110 AYTAEIIAGSLKATPHGEIEAAKAMGMSRMKMYRRILLPSALRRALPQYSNEVIMMLQTT 169 Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS-IMIALF 384 SLA V D+ T+ Q E + YL L+ I++ LF Sbjct: 170 SLASIVTLIDITGAARTVNAQYYLPFEAYITAGVFYLCLTFILVRLF 216 >gi|260904822|ref|ZP_05913144.1| polar amino acid ABC transporter, inner membrane subunit [Brevibacterium linens BL2] Length = 245 Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 57/209 (27%), Positives = 108/209 (51%), Gaps = 17/209 (8%) Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240 LT++ + V S ++ I L+L R + + + L LYI F T +L+ L Sbjct: 23 LTVEIAVIVIVLSMIIAIPLALL-----RMSNIEVVRWLAQLYIEIFRC----TPLLVQL 73 Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300 + +++ P L G T+ P +S IAL+ AF+AE RSG +VP Q+EA Sbjct: 74 -FWVYYALPTLT------GITI-PGTISAIIALTLNLTAFMAEAYRSGFQSVPPEQVEAG 125 Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 L LT + R +++PQA++ +P + S +++ K+++L + ADL+ I ++ Sbjct: 126 KMLRLTRFQQIRHIIVPQALKQQLPVIMSLNISIFKDTALVSTIAVADLMFTANKISTES 185 Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLN 389 +A+EI+ + +Y ++ +L ++++ Sbjct: 186 YRALEILTVAALMYFIIAFPASLILSKIE 214 >gi|302521615|ref|ZP_07273957.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Streptomyces sp. SPB78] gi|302430510|gb|EFL02326.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Streptomyces sp. SPB78] Length = 244 Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 45/131 (34%), Positives = 69/131 (52%), Gaps = 1/131 (0%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G ++P F + +A A+ +E+VR L AVPR Q EAA+AL + + R V+LPQ Sbjct: 83 GYQLNPLFCGV-VAFGINYGAYGSEVVRGALNAVPRAQFEAAVALNFSPVQRMRKVILPQ 141 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378 A +IP TS + LLK + L + D+ +V + ++TG L + IY L+ Sbjct: 142 AWVQMIPSFTSLLIMLLKATPLLWLITAVDITAVVQQMRDRTGATAPAYLTLLVIYFVLA 201 Query: 379 IMIALFMNRLN 389 ++ L MN L Sbjct: 202 YLLTLGMNALE 212 >gi|222102718|ref|YP_002539757.1| ABC transporter membrane spanning protein [Agrobacterium vitis S4] gi|221739319|gb|ACM40052.1| ABC transporter membrane spanning protein [Agrobacterium vitis S4] Length = 228 Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 40/126 (31%), Positives = 69/126 (54%) Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329 Y+ LS TAA+ AEI R ++ +P GQ EA +LGL+ ++ T +LLPQA R +P + Sbjct: 102 YVVLSLNTAAYCAEIWRGAILGLPIGQSEAGRSLGLSKQRITVSILLPQAFRLALPAIGG 161 Query: 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 Q + LLK ++L A+ + ++ + QT + E +L +Y L+ +I + Sbjct: 162 QNILLLKGTALTAAITVFETMATANLVRAQTFRTYEPLLAAALVYFVLASIITSGFKYME 221 Query: 390 AKIALK 395 ++A + Sbjct: 222 TRLASR 227 >gi|186472111|ref|YP_001859453.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia phymatum STM815] gi|184194443|gb|ACC72407.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia phymatum STM815] Length = 218 Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 41/128 (32%), Positives = 70/128 (54%), Gaps = 7/128 (5%) Query: 237 LIALKYQLHFDKPVLGQF--NFIG----GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290 ++ L +L P+L Q F G G VSP +++ + L+ YT+A++ +I R + Sbjct: 52 IVVLYVELFQGTPLLMQLFLAFFGLPLMGVDVSP-WVAATVTLTLYTSAYLVDIWRGCVE 110 Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 AVPRGQ A +LG+T + R V+ PQA++ + P + ++K+++L +GF +L Sbjct: 111 AVPRGQWAAGASLGMTFAQQLRYVVWPQALKIAVAPTVGFLVQVVKSTALTSIIGFTELT 170 Query: 351 SVGGTIIN 358 G I N Sbjct: 171 KTGTMITN 178 >gi|104781004|ref|YP_607502.1| amino acid ABC transporter permease [Pseudomonas entomophila L48] gi|95109991|emb|CAK14696.1| putative amino acid ABC transporter, permease protein [Pseudomonas entomophila L48] Length = 235 Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 54/168 (32%), Positives = 87/168 (51%), Gaps = 14/168 (8%) Query: 226 TFLIFGLPTLVLI-----ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280 T LI +P LVLI +++ L+ LG ++++ + P F + I L A+ Sbjct: 60 TTLIRSVPDLVLILLIFYSMQIWLNDLTEALG-WDYV---EIDP-FGAGVITLGFIYGAY 114 Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340 E R +++VP GQ+EAA A GL+ + RLVL PQ MR +P L + +L LLK+++L Sbjct: 115 FTENFRGAILSVPAGQLEAATAYGLSRAQRFRLVLFPQLMRFALPGLGNNWLVLLKSTAL 174 Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388 +G ADLV G+ +L ++ + + ++I NRL Sbjct: 175 VSIIGLADLVKAA----QNAGKTTNDVLFFLSLAGLVYLLITTLSNRL 218 >gi|229817230|ref|ZP_04447512.1| hypothetical protein BIFANG_02490 [Bifidobacterium angulatum DSM 20098] gi|229785019|gb|EEP21133.1| hypothetical protein BIFANG_02490 [Bifidobacterium angulatum DSM 20098] Length = 367 Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 35/98 (35%), Positives = 63/98 (64%), Gaps = 2/98 (2%) Query: 254 FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313 F F+G SP + S+ +AL Y + +AE+VRSG+ +P GQ EA++ALGLT ++ Sbjct: 135 FAFVG--LPSPAYWSVVLALIIYNGSVVAELVRSGVGNLPDGQREASLALGLTQTQSLMQ 192 Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 + +PQA+ +++P +Q + +LK+++L + + DL+ Sbjct: 193 IEVPQAIVAMLPAAVTQLVVVLKDTALGSIIMYTDLLQ 230 >gi|167034984|ref|YP_001670215.1| polar amino acid ABC transporter inner membrane subunit [Pseudomonas putida GB-1] gi|166861472|gb|ABY99879.1| polar amino acid ABC transporter, inner membrane subunit [Pseudomonas putida GB-1] Length = 232 Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 52/167 (31%), Positives = 83/167 (49%), Gaps = 11/167 (6%) Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL----YIALSCYTA 278 ++ T++I G P LV + L Y L QF + S P S +A T+ Sbjct: 56 WLYTYVIRGTPMLVQLFLIYY------GLAQFEAVRESIFWPLLSSATFCACLAFGINTS 109 Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338 A+ AEI+ L A P G++EAA A+G++ K R +LLP A+R +P +++ + +L+ + Sbjct: 110 AYTAEIIAGSLKATPHGEIEAAKAMGMSRMKMYRRILLPSALRRALPQYSNEVIMMLQTT 169 Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS-IMIALF 384 SLA V D+ T+ Q E + YL L+ I++ LF Sbjct: 170 SLASIVTLIDITGAARTVNAQYYLPFEAYITAGVFYLCLTFILVRLF 216 >gi|330826100|ref|YP_004389403.1| polar amino acid ABC transporter inner membrane subunit [Alicycliphilus denitrificans K601] gi|329311472|gb|AEB85887.1| polar amino acid ABC transporter, inner membrane subunit [Alicycliphilus denitrificans K601] Length = 221 Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 64/223 (28%), Positives = 105/223 (47%), Gaps = 30/223 (13%) Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF------LIFGLPT 234 +T+ F+ S +G+VL+L GK P+ +S +I GLP Sbjct: 21 VTVQVTVLSFLLSSAIGLVLAL-------------GKLSPVRAVSVCASTVINVIRGLPI 67 Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294 +V + + ++F P +G I S + L IA S Y A E R+G+ AV Sbjct: 68 IVQL---FYIYFVLPDIG----IQLSAFQAGVIGLGIAYSAYQA----ENFRAGIEAVDP 116 Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354 GQ EAA+A+G+ R V+LPQA R +PP + + +LK+SSL + A++ G Sbjct: 117 GQREAALAMGMRPALLMRRVILPQAFRIALPPYGNTLVMMLKDSSLISTITVAEMTRAGQ 176 Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 I + T Q + + + +YL++S+ + + RL + K Sbjct: 177 LIASSTFQNMTVYTLVALLYLAMSLPLVWSLRRLERRFGAGRK 219 >gi|254381563|ref|ZP_04996927.1| polar amino acid ABC transporter [Streptomyces sp. Mg1] gi|194340472|gb|EDX21438.1| polar amino acid ABC transporter [Streptomyces sp. Mg1] Length = 314 Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 45/124 (36%), Positives = 74/124 (59%), Gaps = 10/124 (8%) Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281 +Y+ F G+PTL+L+ L + F P L + G+ P + + IAL AA++ Sbjct: 145 VYVDVFR--GVPTLLLVFL---VGFGLPAL----RLQGTPSQPWVLGV-IALVLSYAAYV 194 Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341 E++R+GL +V Q AA ALGL R+ R V+LPQA+R+++PPL + ++ L K+++L Sbjct: 195 GEVLRAGLNSVHPAQRNAARALGLGERQTLRYVVLPQAVRNVLPPLLNDFIALQKDTALV 254 Query: 342 VAVG 345 +G Sbjct: 255 AVLG 258 >gi|167570892|ref|ZP_02363766.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Burkholderia oklahomensis C6786] Length = 219 Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 57/211 (27%), Positives = 105/211 (49%), Gaps = 14/211 (6%) Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247 K V S VLG+++ L + R + + A+ Y+S L+ G P LV + + +++ Sbjct: 23 KFAVASMVLGLIVGLVVA-IVRIGNNRILSAVAQGYVS--LMRGTPLLVQM---FVVYYG 76 Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307 P +G ++ P ++ L+ A+++E +R ++ + RGQ A+ +LGLTH Sbjct: 77 LPDIG-------ISLDPTSAGIF-TLTLNAGAYLSESMRGAILGIGRGQWAASHSLGLTH 128 Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367 + R V+ PQA+R +P L + ++L+K++SL + +L+ +I T Q + + Sbjct: 129 VQTLRHVVCPQALRLAVPSLGNTLISLIKDTSLVSVITVTELLRSTQEVIASTFQPLPLY 188 Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 L IY LS ++A R+ AL Sbjct: 189 LAAAAIYWVLSTLLARLQGRIETHCALPSTH 219 >gi|229816579|ref|ZP_04446878.1| hypothetical protein COLINT_03637 [Collinsella intestinalis DSM 13280] gi|229807914|gb|EEP43717.1| hypothetical protein COLINT_03637 [Collinsella intestinalis DSM 13280] Length = 247 Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 36/116 (31%), Positives = 67/116 (57%), Gaps = 1/116 (0%) Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 AA+ AEI RSGL +VPRGQ EAA LG + + +++PQ ++ I+P + ++ + L+K+ Sbjct: 129 AAYFAEIYRSGLQSVPRGQYEAAEVLGYSKFQTLVHIVVPQVVKRIMPAIGNEVITLVKD 188 Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393 +SLA A+G ++ S ++ + + I IY + + + L + + ++A Sbjct: 189 TSLAFAIGVGEMFSTAKALVASQVSMVPFV-IAAAIYWAFNFAVELVLGSIEKRLA 243 >gi|167915708|ref|ZP_02502799.1| ABC-type polar amino acid transport system, ATPase component [Burkholderia pseudomallei 112] Length = 320 Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 47/141 (33%), Positives = 81/141 (57%), Gaps = 6/141 (4%) Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH-RKATRLVLLPQAM 320 +SP F + + L+ AAF AE +R G+++V +GQ+EAA ALGL R+ATR+V LPQAM Sbjct: 164 ISP-FCAAVLGLTLNHAAFAAEGIRGGILSVDQGQLEAAAALGLPRARQATRIV-LPQAM 221 Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL---IWMFIYLSL 377 R+ +P + + L K SS+ + +L I + + I +++ +W I L++ Sbjct: 222 RAFLPVAFNDLIALAKGSSMVYVLAMPELFYTVQVIYRRNLEVIPLLMVATVWYLIILTV 281 Query: 378 SIMIALFMNRLNAKIALKEKK 398 ++ + R A+ A++E + Sbjct: 282 LSIVQAQVERRYARGAVREPE 302 >gi|308067558|ref|YP_003869163.1| Hypothetical amino-acid ABC transporter permease protein [Paenibacillus polymyxa E681] gi|305856837|gb|ADM68625.1| Hypothetical amino-acid ABC transporter permease protein [Paenibacillus polymyxa E681] Length = 215 Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 55/202 (27%), Positives = 103/202 (50%), Gaps = 18/202 (8%) Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251 F ++G+V+++ +R + + L +Y+S +I G P LV IA+ Y L Sbjct: 29 FGLIIGLVVAV-----ARLKGNRPVRWLARMYVS--IIRGTPVLVQIAVIYY------GL 75 Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311 + GS + +ALS T A+++E R ++AVP+GQ EAA A G++ + Sbjct: 76 DDYGISFGSLTAA-----CLALSINTGAYLSETFRGAILAVPQGQTEAAYATGMSPGQTM 130 Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371 ++LPQA+R I P+ + ++ +LK +SL +G ++L+ + Q + +L Sbjct: 131 WRIILPQAVRIAIAPMGNTFVGMLKETSLVSVIGVSELMRQAQLLQAQYLLYMPFLLEIG 190 Query: 372 FIYLSLSIMIALFMNRLNAKIA 393 +Y +SI + + R+ ++A Sbjct: 191 LMYWIMSIGFSAILERVEKRLA 212 Score = 41.2 bits (95), Expect = 0.31, Method: Compositional matrix adjust. Identities = 28/94 (29%), Positives = 41/94 (43%), Gaps = 19/94 (20%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G T ++ M IIG +V RL N+ V W+ R+YV + R P LV I + Sbjct: 12 LLKGAYYTLYITIVSMFFGLIIGLVVAVARLKGNRPVRWLARMYVSIIRGTPVLVQIAVI 71 Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLT 182 Y L++ G+SF +LT Sbjct: 72 YYG-------------------LDDYGISFGSLT 86 >gi|271970517|ref|YP_003344713.1| glutamine ABC transporter permease [Streptosporangium roseum DSM 43021] gi|270513692|gb|ACZ91970.1| glutamine ABC transporter, permease protein, putative [Streptosporangium roseum DSM 43021] Length = 282 Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 43/129 (33%), Positives = 75/129 (58%), Gaps = 10/129 (7%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 +AL + Y F G+PT+++I Y + F P LG + G + + IAL+ Sbjct: 112 RALAVAYTDVFR--GVPTILVI---YLVGFGLPALG----LQGMPTDLATLGV-IALTLS 161 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 A++AE+ R+G+ +V Q AA +LGL+H + R V++PQA R ++PPL + +++L K Sbjct: 162 YGAYVAEVFRAGIDSVHPSQWAAARSLGLSHGRTMRYVVVPQAARRVVPPLLNDFVSLQK 221 Query: 337 NSSLAVAVG 345 +++L +G Sbjct: 222 DTALVATIG 230 >gi|167743406|ref|ZP_02416180.1| ABC-type polar amino acid transport system, ATPase component [Burkholderia pseudomallei 14] Length = 316 Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 47/141 (33%), Positives = 81/141 (57%), Gaps = 6/141 (4%) Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH-RKATRLVLLPQAM 320 +SP F + + L+ AAF AE +R G+++V +GQ+EAA ALGL R+ATR+V LPQAM Sbjct: 164 ISP-FCAAVLGLTLNHAAFAAEGIRGGILSVDQGQLEAAAALGLPRARQATRIV-LPQAM 221 Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL---IWMFIYLSL 377 R+ +P + + L K SS+ + +L I + + I +++ +W I L++ Sbjct: 222 RAFLPVAFNDLIALAKGSSMVYVLAMPELFYTVQVIYRRNLEVIPLLMVATVWYLIILTV 281 Query: 378 SIMIALFMNRLNAKIALKEKK 398 ++ + R A+ A++E + Sbjct: 282 LSIVQAQVERRYARGAVREPE 302 >gi|27378421|ref|NP_769950.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] gi|27351569|dbj|BAC48575.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] Length = 243 Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 44/112 (39%), Positives = 62/112 (55%) Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 AA++AEIVRSG +AV GQ EAA AL L+ R V LPQA R +IPPL + +LLK Sbjct: 103 AAYLAEIVRSGFMAVSAGQREAAWALSLSPWVTFRRVTLPQAFRLMIPPLGNSINSLLKA 162 Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 +SLA + +L+ ++ + Q +E+ YL L+ + RL Sbjct: 163 TSLASVISVEELMRRSDMLMQEHFQILEVYAAATAYYLILTSVWDAVQRRLE 214 >gi|26991170|ref|NP_746595.1| polar amino acid ABC transporter inner membrane subunit [Pseudomonas putida KT2440] gi|148546671|ref|YP_001266773.1| polar amino acid ABC transporter inner membrane subunit [Pseudomonas putida F1] gi|24986215|gb|AAN70059.1|AE016645_5 basic amino acid ABC transporter, permease protein [Pseudomonas putida KT2440] gi|148510729|gb|ABQ77589.1| polar amino acid ABC transporter, inner membrane subunit [Pseudomonas putida F1] Length = 232 Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 52/167 (31%), Positives = 83/167 (49%), Gaps = 11/167 (6%) Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL----YIALSCYTA 278 ++ T++I G P LV + L Y L QF + S P S +A T+ Sbjct: 56 WLYTYVIRGTPMLVQLFLIYY------GLAQFEAVRESIFWPLLSSATFCACLAFGINTS 109 Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338 A+ AEI+ L A P G++EAA A+G++ K R +LLP A+R +P +++ + +L+ + Sbjct: 110 AYTAEIIAGSLKATPHGEIEAAKAMGMSRMKMYRRILLPSALRRALPQYSNEVIMMLQTT 169 Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS-IMIALF 384 SLA V D+ T+ Q E + YL L+ I++ LF Sbjct: 170 SLASIVTLIDITGAARTVNAQYYLPFEAYITAGVFYLCLTFILVRLF 216 >gi|318057584|ref|ZP_07976307.1| putative amino acid ABC transporter permease protein [Streptomyces sp. SA3_actG] gi|318076839|ref|ZP_07984171.1| putative amino acid ABC transporter permease protein [Streptomyces sp. SA3_actF] Length = 244 Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 45/131 (34%), Positives = 68/131 (51%), Gaps = 1/131 (0%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G + P F + +A A+ +E+VR L AVPR Q EAA+AL + + R V+LPQ Sbjct: 83 GYQLDPLFCGV-VAFGINYGAYGSEVVRGALNAVPRAQFEAAVALNFSPVQRMRKVILPQ 141 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378 A +IP TS + LLK + L + D+ +V + ++TG L + IY L+ Sbjct: 142 AWVQMIPSFTSLLIMLLKATPLLWLITAVDITAVVQQMRDRTGATAPAYLTLLVIYFVLA 201 Query: 379 IMIALFMNRLN 389 ++ L MN L Sbjct: 202 YLLTLGMNALE 212 >gi|297156306|gb|ADI06018.1| glutamate transporter permease [Streptomyces bingchenggensis BCW-1] Length = 287 Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 39/134 (29%), Positives = 74/134 (55%), Gaps = 7/134 (5%) Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327 +L L+ Y + +AE+ R+G+ +V RGQ EAA +LGL + VL+PQ +R+++P + Sbjct: 134 ALVAGLTLYNGSVLAEVFRAGVNSVERGQREAAYSLGLRKTQVMAYVLVPQGVRAMLPAI 193 Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI---YLSLSIMIALF 384 SQ + LK++SL + + + + G I + I + M I Y+ + ++++ F Sbjct: 194 ISQLVVALKDTSLGFLITYEEFLHAGKLIAGNLDYGLPFIPVVMVISPVYIGMCMLLSWF 253 Query: 385 MNRLNAKIALKEKK 398 N +A +E++ Sbjct: 254 AN----WVAKRERR 263 Score = 39.7 bits (91), Expect = 0.86, Method: Compositional matrix adjust. Identities = 20/43 (46%), Positives = 29/43 (67%), Gaps = 1/43 (2%) Query: 117 GRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIP 159 GRLS + V W+ + VE FR +P LV+IFF++ + L V P+P Sbjct: 92 GRLSDHGPVRWVATIVVEFFRAMPVLVMIFFIFVA-LKVQPLP 133 >gi|170691132|ref|ZP_02882298.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia graminis C4D1M] gi|170144381|gb|EDT12543.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia graminis C4D1M] Length = 238 Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 62/218 (28%), Positives = 103/218 (47%), Gaps = 30/218 (13%) Query: 181 LTMDTNAKIFVFSFVLGIVLSLFAT---RLSRHFHEKTGKAL---PLLYISTFLIFGLPT 234 LT+ FV S VLG++ +L + RL R +A+ P+L + FGLP+ Sbjct: 21 LTLQVTLLAFVLSMVLGLLTALASASRVRLLRGIASVYIEAIRNTPVLLQIFIVFFGLPS 80 Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294 L G T++ + + IAL A++AE+ R+G+ +VPR Sbjct: 81 L-----------------------GITLN-AYTAGVIALGVNVGAYLAEVFRAGIQSVPR 116 Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354 GQ+EAA LGL + V+LPQA R++ P + + + LL +SL A+ +L Sbjct: 117 GQLEAASILGLERSQIFMEVVLPQAARAVYPAIVNNLIQLLLGTSLLSAIALPELSGTAT 176 Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 I +T I+ I + YL LS +++ ++ ++ Sbjct: 177 VINARTLLYIQTFTITLIAYLFLSNVLSWVAGQIGVRV 214 >gi|170721982|ref|YP_001749670.1| polar amino acid ABC transporter inner membrane subunit [Pseudomonas putida W619] gi|169759985|gb|ACA73301.1| polar amino acid ABC transporter, inner membrane subunit [Pseudomonas putida W619] Length = 239 Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 60/184 (32%), Positives = 95/184 (51%), Gaps = 23/184 (12%) Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTF--LIFGLP---TLVLIALKYQLHFDKPV 250 LG+V++L A ++ K LP + +TF + GLP TL++I Q+ + + Sbjct: 40 LGLVVALAA---------RSRKRLPRAWSTTFSTVFRGLPELLTLLIIYYGCQIAAQQ-L 89 Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 L + G ++ F++ IA S AAF +EI + +P+GQ+EA ALGL R A Sbjct: 90 LAAMGYQGEFLIN-TFLAAMIAFSLVFAAFSSEIWLAAFKTLPKGQLEACAALGLGKRTA 148 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370 V+LPQ R +P L++ +L+LLK++SL + DL + QT A+ + Sbjct: 149 FFKVVLPQLTRIALPGLSNNWLSLLKDTSLVSTISLVDL-------MRQTNLAVSVTKEP 201 Query: 371 MFIY 374 MF Y Sbjct: 202 MFFY 205 >gi|319780313|ref|YP_004139789.1| polar amino acid ABC transporter inner membrane subunit [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317166201|gb|ADV09739.1| polar amino acid ABC transporter, inner membrane subunit [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 215 Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 37/125 (29%), Positives = 68/125 (54%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + L+ + +A++AEI RSG+ A+P GQ +A +LGL + + RL++LPQA P Sbjct: 91 LGLTFFASAYLAEIWRSGVAALPLGQWDAGASLGLHYLQELRLIILPQAFSITRAPTVGF 150 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 + L+K+++L +GF +LV I N T + ++ + I+ + + + RL Sbjct: 151 LVQLIKSTALTSIIGFEELVRTSNAINNATFEPFKVYGLVALIFFVMCFPLTQYARRLEK 210 Query: 391 KIALK 395 + A + Sbjct: 211 QAAAR 215 >gi|260891039|ref|ZP_05902302.1| amino acid ABC transporter, permease protein [Leptotrichia hofstadii F0254] gi|260859066|gb|EEX73566.1| amino acid ABC transporter, permease protein [Leptotrichia hofstadii F0254] Length = 225 Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 55/215 (25%), Positives = 99/215 (46%), Gaps = 34/215 (15%) Query: 191 VFSFVLGIVLSLFATRLSR------HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244 VFS + G++L + T ++ F+ ++ + +PLL + FG +A + L Sbjct: 34 VFSILFGLILGIVMTSKNKIIYGILKFYLESMRIIPLLVWLFIIYFG------VAKGFDL 87 Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304 H D + I + A + +IVR +I++P+ Q E+A ALG Sbjct: 88 HIDSET-----------------TTIIVFVIWGTAEMMDIVRGAIISLPKIQGESAKALG 130 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364 L + R VLLPQA+R I P + ++K +SLA+ + A+++ +G II + + Sbjct: 131 LDTSQVYRYVLLPQAVRRIAPAAVNLITRMIKTTSLAIFIEVAEVLKIGRQIIEFSSRKN 190 Query: 365 EIILIWM-----FIYLSLSIMIALFMNRLNAKIAL 394 + W+ F+Y + I L ++ K A+ Sbjct: 191 PMAPFWVYLFIFFLYFIICYPITLLSKKMEKKWAI 225 >gi|317488403|ref|ZP_07946956.1| His/Glu/Gln/Arg/opine family amino ABC transporter [Eggerthella sp. 1_3_56FAA] gi|316912447|gb|EFV34003.1| His/Glu/Gln/Arg/opine family amino ABC transporter [Eggerthella sp. 1_3_56FAA] Length = 324 Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 30/70 (42%), Positives = 51/70 (72%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +A+ Y +I+E+VRSG+ ++ RGQ EAA + G ++ ++ +++LPQA+R I+PPL Q Sbjct: 98 LAIGIYHGGYISEVVRSGIGSIHRGQFEAAKSQGFSYWQSMFVIILPQAIRIIMPPLAVQ 157 Query: 331 YLNLLKNSSL 340 NL+KN+S+ Sbjct: 158 AANLVKNTSV 167 >gi|226200044|ref|ZP_03795593.1| amino acid ABC transporter, ATP-binding/permease protein [Burkholderia pseudomallei Pakistan 9] gi|225927896|gb|EEH23934.1| amino acid ABC transporter, ATP-binding/permease protein [Burkholderia pseudomallei Pakistan 9] Length = 582 Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 47/141 (33%), Positives = 81/141 (57%), Gaps = 6/141 (4%) Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH-RKATRLVLLPQAM 320 +SP F + + L+ AAF AE +R G+++V +GQ+EAA ALGL R+ATR+V LPQAM Sbjct: 110 ISP-FCAAVLGLTLNHAAFAAEGIRGGILSVDQGQLEAAAALGLPRARQATRIV-LPQAM 167 Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL---IWMFIYLSL 377 R+ +P + + L K SS+ + +L I + + I +++ +W I L++ Sbjct: 168 RAFLPVAFNDLIALAKGSSMVYVLAMPELFYTVQVIYRRNLEVIPLLMVATVWYLIILTV 227 Query: 378 SIMIALFMNRLNAKIALKEKK 398 ++ + R A+ A++E + Sbjct: 228 LSIVQAQVERRYARGAVREPE 248 >gi|260588159|ref|ZP_05854072.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Blautia hansenii DSM 20583] gi|331082275|ref|ZP_08331402.1| hypothetical protein HMPREF0992_00326 [Lachnospiraceae bacterium 6_1_63FAA] gi|260541686|gb|EEX22255.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Blautia hansenii DSM 20583] gi|330403069|gb|EGG82634.1| hypothetical protein HMPREF0992_00326 [Lachnospiraceae bacterium 6_1_63FAA] Length = 236 Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 37/122 (30%), Positives = 76/122 (62%) Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 + A+I+EI+RSG+ +V GQ+EA A+GL+ + +++PQA+++I+P L +++++L+K Sbjct: 114 SGAYISEIMRSGIQSVDAGQLEAGRAVGLSFSVSMVKIVIPQAVKNILPTLGNEFISLIK 173 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 +S+ VG ADL I + + + + L+ IY+ L ++I+L + L + + Sbjct: 174 ETSIVSFVGAADLYVAFSYIGSNSYEFMVPYLVMALIYIVLVLIISLLVKLLERSLKKSD 233 Query: 397 KK 398 ++ Sbjct: 234 RR 235 Score = 39.7 bits (91), Expect = 0.93, Method: Compositional matrix adjust. Identities = 26/92 (28%), Positives = 44/92 (47%), Gaps = 5/92 (5%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN-----KLVAWICRVYVEVFRNIPPLV 143 ++ G NT +A G+I +IGTL+ R+ +++ IC YV +FR P +V Sbjct: 24 VIEGLQNTLMIAIVGLIVGILIGTLIATVRVLPKYKRLPRILNGICSFYVALFRGTPMVV 83 Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRG 175 + Y +L ++ I V+ +F N G Sbjct: 84 QLLVFYYVLLPIMGIRTSGEVVAMAVFGLNSG 115 >gi|328463948|gb|EGF35458.1| amino acid ABC transporter, permease protein [Lactobacillus helveticus MTCC 5463] Length = 215 Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 37/132 (28%), Positives = 72/132 (54%), Gaps = 1/132 (0%) Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321 V P + + +A AA+ AEI R G ++ GQ EAA L L+ + +++PQ ++ Sbjct: 82 VFPRYQAALLAFVLNYAAYFAEIFRGGFQSIDEGQFEAAKVLHLSRWQTMTKIVIPQVIK 141 Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 ++P + ++ +NL+K+SSL +G DL+ G + + + ++L+ + IYL L + Sbjct: 142 IVLPSIGNEVINLVKDSSLVYVIGLGDLLRAGNVAMARDVTLVPLVLVGV-IYLLLISIC 200 Query: 382 ALFMNRLNAKIA 393 A + +L ++ Sbjct: 201 AFVLKKLEKHVS 212 >gi|222153141|ref|YP_002562318.1| amino acid ABC transporter permease [Streptococcus uberis 0140J] gi|222113954|emb|CAR42213.1| putative amino acid ABC transporter permease protein [Streptococcus uberis 0140J] Length = 213 Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 33/91 (36%), Positives = 55/91 (60%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +A + AA+ AEI R G+ A+P+GQ EAA L LT + + ++LPQ + ++P + ++ Sbjct: 89 LAFTMNYAAYFAEIFRGGIEAIPKGQYEAAKVLKLTPFQTIQHIILPQVFKIVLPSVFNE 148 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361 +NL+K+SSL +G DL+ T N+ Sbjct: 149 VINLVKDSSLVYVLGVGDLLLASKTAANRDA 179 >gi|310830296|ref|YP_003965396.1| polar amino acid ABC transporter, inner membrane subunit [Ketogulonicigenium vulgare Y25] gi|308753202|gb|ADO44345.1| polar amino acid ABC transporter, inner membrane subunit [Ketogulonicigenium vulgare Y25] Length = 218 Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 40/115 (34%), Positives = 61/115 (53%) Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 +A++ EI R + AVP+GQ EAA AL L++ R V+LPQAMR P + L+K Sbjct: 98 SAYLGEIWRGAIEAVPQGQSEAATALSLSYPDRMRHVILPQAMRVATAPTVGFLVQLIKG 157 Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 +SLA +GF +L G + N T Q + +Y L ++L + A++ Sbjct: 158 TSLASIIGFTELTRAGQIVNNATFQPFLVFGTVAALYFILCWPLSLLARHMEARM 212 >gi|110635477|ref|YP_675685.1| polar amino acid ABC transporter, inner membrane subunit [Mesorhizobium sp. BNC1] gi|110286461|gb|ABG64520.1| amino acid ABC transporter membrane protein, PAAT family [Chelativorans sp. BNC1] Length = 295 Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 62/218 (28%), Positives = 115/218 (52%), Gaps = 16/218 (7%) Query: 176 LSFPTLTMD--TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTG---KALPLLYISTFLIF 230 LSFP + N IFV + + +V L ++R KT +A+ LY F Sbjct: 78 LSFPLILKAFWVNIYIFVVAEICVLVWGLIVA-VARLIPGKTAAPIRAIATLYTDIFR-- 134 Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290 G+P ++ I Y + F P+ G +S E ++ IAL+ A++AE+ R+G+ Sbjct: 135 GMPAIITI---YLIGFGLPLSGLPIL---KDLSVETYAI-IALTLTFGAYVAEVYRAGIE 187 Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 ++ Q+ AA +LGLT+ + R V++PQA+R I+PPL + ++ L K+++L +G D Sbjct: 188 SIHWSQVAAARSLGLTYMQTMRYVIVPQAVRRIVPPLLNDFIGLQKDTALVNVIGSIDAF 247 Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388 + I++ + + + F+++ ++I A F++R+ Sbjct: 248 N-QAKILSSNYFNLSPVTVVAFLFVVITIPQARFVDRI 284 >gi|300716668|ref|YP_003741471.1| Putative ABC transporter, permease [Erwinia billingiae Eb661] gi|299062504|emb|CAX59621.1| Putative ABC transporter, permease [Erwinia billingiae Eb661] Length = 306 Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 38/129 (29%), Positives = 75/129 (58%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 +F + I L+ AA+ AEI+R G + V GQ EAA ALGL+ + T ++LPQA+R+II Sbjct: 144 QFPAAIIGLTLVQAAYSAEIIRGGFLGVDFGQHEAASALGLSAFRRTFRIILPQALRAII 203 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 P ++ ++L K +++ + +L I N+ + I ++++ YL ++ ++++ Sbjct: 204 PTAFNEIISLAKGTAMVYVLAMPELFYTIQMIYNRNQEVIPLLMVGAAWYLIITTVLSVI 263 Query: 385 MNRLNAKIA 393 + + + +A Sbjct: 264 QHNVESWLA 272 >gi|289705233|ref|ZP_06501632.1| ABC transporter, permease protein [Micrococcus luteus SK58] gi|289557983|gb|EFD51275.1| ABC transporter, permease protein [Micrococcus luteus SK58] Length = 226 Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 36/74 (48%), Positives = 48/74 (64%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+ IALS Y AAF+ E +RSG+ VP GQ EAA ++GL A R V+LPQA+R I Sbjct: 95 FIYAVIALSLYHAAFMCEAIRSGVNTVPLGQAEAARSIGLGFLPAARHVILPQALRGAIT 154 Query: 326 PLTSQYLNLLKNSS 339 PL + + L KN++ Sbjct: 155 PLGNTVIALTKNTT 168 >gi|118587044|ref|ZP_01544475.1| ABC-type amino acid transport system, permease [Oenococcus oeni ATCC BAA-1163] gi|290890987|ref|ZP_06554051.1| hypothetical protein AWRIB429_1441 [Oenococcus oeni AWRIB429] gi|118432565|gb|EAV39300.1| ABC-type amino acid transport system, permease [Oenococcus oeni ATCC BAA-1163] gi|290479386|gb|EFD88046.1| hypothetical protein AWRIB429_1441 [Oenococcus oeni AWRIB429] Length = 231 Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 38/137 (27%), Positives = 78/137 (56%), Gaps = 3/137 (2%) Query: 259 GSTVS---PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315 GS++ P + IA++ ++A+++E +R+G ++ +GQ EAA +LGL + R V+ Sbjct: 92 GSSIEINIPTIPAGIIAVAINSSAYVSEAIRAGFNSIDKGQTEAARSLGLPKKLTMRYVI 151 Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375 +PQA+++I P L ++++ L+K SS+ + +G D++ I T + + +++ IY Sbjct: 152 IPQALKNIWPALGNEFVALIKESSIVLVIGTPDIMYQINNIRAVTFEPVAPLILSAVIYF 211 Query: 376 SLSIMIALFMNRLNAKI 392 L+ + M K+ Sbjct: 212 VLTFGLTRIMKHFEGKM 228 >gi|12831454|gb|AAK08609.1| GtpD [Agrobacterium tumefaciens] Length = 240 Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 41/102 (40%), Positives = 62/102 (60%), Gaps = 1/102 (0%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G +++P F S +++S + A A I+R+GL++VP GQ EAA++ GL K LV+LPQ Sbjct: 77 GLSLNP-FWSSALSVSVWGGANGAHIIRAGLLSVPIGQREAALSSGLRSWKGLLLVVLPQ 135 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 AM I+PP S L++ SSL +G +L+ +I QT Sbjct: 136 AMPIILPPYVSLVTGLVQASSLGSVLGVNELLRSAQILIEQT 177 >gi|167815880|ref|ZP_02447560.1| ABC transporter, permease protein [Burkholderia pseudomallei 91] Length = 262 Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 37/96 (38%), Positives = 58/96 (60%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P ++ ALS A++A V +G+ A GQ +A +ALGLT + R VLLPQA+R + Sbjct: 109 PGLAAVVCALSLVGGAYLAHSVHAGIRAAGDGQWQAGLALGLTRWQTVRHVLLPQAVRIM 168 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359 P +Q+++L+K++SLA VG +L V + N+ Sbjct: 169 TPSFVNQWVSLVKDTSLAYIVGVPELSFVATQVNNR 204 >gi|317486177|ref|ZP_07945016.1| His/Glu/Gln/Arg/opine family amino ABC transporter [Bilophila wadsworthia 3_1_6] gi|316922568|gb|EFV43815.1| His/Glu/Gln/Arg/opine family amino ABC transporter [Bilophila wadsworthia 3_1_6] Length = 224 Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 62/222 (27%), Positives = 111/222 (50%), Gaps = 21/222 (9%) Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232 NRGL + +A I FVLG++ T ++R F K ++L + + F G+ Sbjct: 18 NRGLVMSIALIVPSATI---GFVLGVL-----TGVARVFGPKWLRSLGNGFTTIFR--GV 67 Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292 P +V + + L+F P LG + + P S+ + C T A+ +E VR L+++ Sbjct: 68 PLVVQLMI---LYFGLPNLGIY-------LEPYPASVLGFILC-TGAYQSEYVRGALLSI 116 Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352 +GQ++AA ALG T + V++PQA R +P ++ + L+K SSLA + +L Sbjct: 117 RQGQIKAAYALGFTKLQTILWVVIPQAARRALPGCGNEIIYLIKYSSLAYIITCIELTGE 176 Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394 +++++ + E+ ++ YL L F+ +L K A+ Sbjct: 177 AKVLVSRSFRPTEVYIVAGIYYLVLVSFATWFLQKLERKFAI 218 >gi|291550028|emb|CBL26290.1| amino acid ABC transporter membrane protein, PAAT family (TC 3.A.1.3.-) [Ruminococcus torques L2-14] Length = 228 Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 48/179 (26%), Positives = 93/179 (51%), Gaps = 10/179 (5%) Query: 220 PLLYISTFLIF---GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 PL YI+ +++ G P ++ + + Y +F VLG N I G S F++ +A Sbjct: 50 PLSYITNIIVWIVRGTPLMIQMLIIY--YFPGLVLG--NPIWGGGESGRFLAASVAFIFN 105 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 A + + I R G+ +P+GQ EA + LG+T + V L Q ++ I+PP++++ + L+K Sbjct: 106 YACYFSVIYRGGIQGIPQGQTEAGLVLGMTKHQIFFKVKLLQMVKRIVPPMSNEIITLVK 165 Query: 337 NSSLAVAVGFADLVSVGGTIINQT---GQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 ++SLA + +++ G + + AI + F YL + ++ + + +L K+ Sbjct: 166 DTSLARIIALQEIIWAGQAFLKGSQGISGAIWPMFFTAFYYLIFNGILTVLLGKLEKKL 224 >gi|317049370|ref|YP_004117018.1| polar amino acid ABC transporter inner membrane subunit [Pantoea sp. At-9b] gi|316950987|gb|ADU70462.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea sp. At-9b] Length = 221 Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 46/151 (30%), Positives = 74/151 (49%), Gaps = 24/151 (15%) Query: 218 ALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT 277 ALPLL + L F LP +Y + PV+G +AL+ Y Sbjct: 62 ALPLLVVIYLLYFVLP-------EYDITLSSPVVG-----------------VLALTLYY 97 Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 A +IA+++R+ + A+P+GQ EA LGL+ + R V+LPQ + ++ PL + L+K+ Sbjct: 98 APYIAQVIRAAIGALPKGQWEACRVLGLSRSEQLRDVVLPQTLPQMLSPLVGLTIGLIKD 157 Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368 S+L V + + I+ T +EI L Sbjct: 158 SALLSIVSVQEFMYAAKQAISATYAPLEIYL 188 >gi|227431661|ref|ZP_03913695.1| amino acid ABC superfamily ATP binding cassette transporter, pemease component [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] gi|227352582|gb|EEJ42774.1| amino acid ABC superfamily ATP binding cassette transporter, pemease component [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] Length = 186 Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 34/81 (41%), Positives = 55/81 (67%), Gaps = 4/81 (4%) Query: 268 SLYIA----LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 +LYIA LS AA+IAE RSG+ ++ GQ EA+ LGL+ R +++PQA++ + Sbjct: 87 NLYIAGALSLSLNAAAYIAETFRSGIQSISEGQREASRTLGLSQFDTMRFIIVPQAIKIV 146 Query: 324 IPPLTSQYLNLLKNSSLAVAV 344 IP L +++++L+K+SSL A+ Sbjct: 147 IPALGNEFISLIKDSSLVSAI 167 Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust. Identities = 19/62 (30%), Positives = 33/62 (53%) Query: 84 SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143 YA + G + T + G++ TI G ++ GR+S N +++ I + Y+ +FR P V Sbjct: 10 DYAPFFMHGLLYTLLFSLCGVVFGTIFGLIIALGRMSKNPVISGIFKTYIGLFRGTPLFV 69 Query: 144 VI 145 I Sbjct: 70 QI 71 >gi|259909459|ref|YP_002649815.1| Putative amino-acid transport system permease protein [Erwinia pyrifoliae Ep1/96] gi|224965081|emb|CAX56613.1| Putative amino-acid transport system permease protein [Erwinia pyrifoliae Ep1/96] gi|283479532|emb|CAY75448.1| putative ABC transport system, inner membrane component [Erwinia pyrifoliae DSM 12163] Length = 227 Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 41/128 (32%), Positives = 74/128 (57%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + I + A+ +EI+R+ L++VP+GQ EAA ++G++ + R +++PQA R +P Sbjct: 89 FPAAVIGFTLNIGAYTSEIIRATLLSVPKGQWEAAHSIGMSWGQTLRRIVMPQAARVAVP 148 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PL++ ++ L+K++SLA + +L I T Q + + IYL LS +++ Sbjct: 149 PLSNTFIALVKDTSLASVITVPELFLAAQRIAAVTYQPLILYTEAAIIYLLLSSVLSALQ 208 Query: 386 NRLNAKIA 393 RL K+A Sbjct: 209 ARLEKKLA 216 >gi|218515610|ref|ZP_03512450.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium etli 8C-3] Length = 169 Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 40/106 (37%), Positives = 68/106 (64%), Gaps = 10/106 (9%) Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290 G+P L+LI Y F P+L G+ V P F+++ L Y +AF++E+VR+G++ Sbjct: 74 GVPLLMLILWSY---FLVPLLT------GADV-PSFVTMLTTLVVYQSAFLSEVVRAGIV 123 Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 A+ GQM+AA ALG ++ A R ++LPQA+ ++IP + S +++ +K Sbjct: 124 ALGSGQMDAARALGHSYIGAMRYIILPQALYNMIPSILSTFVSTIK 169 >gi|187477188|ref|YP_785212.1| amino acid ABC transporter permease [Bordetella avium 197N] gi|115421774|emb|CAJ48285.1| amino acid ABC transporter, permease protein [Bordetella avium 197N] Length = 225 Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 35/103 (33%), Positives = 64/103 (62%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+ +I+LS AA+ E V +G+ ++P GQMEAA + GL+ +A R V+LPQA+R +P Sbjct: 97 FLVTWISLSLVLAAYAEESVWAGIASLPPGQMEAARSSGLSWWQAMRWVILPQAVRRAVP 156 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368 LT++ +++ KN++L V +L++ + +G +++ Sbjct: 157 TLTNRIISITKNTALGSVVSLHELLNAAQGASSLSGNPTPLMM 199 >gi|307299985|ref|ZP_07579770.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD [Sinorhizobium meliloti BL225C] gi|306904874|gb|EFN35457.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD [Sinorhizobium meliloti BL225C] Length = 220 Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 41/135 (30%), Positives = 73/135 (54%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P ++ I L + + AE+ R+G+ VPRGQ EAA A LT R+ V+LPQA+ + Sbjct: 86 PALVAGVIGLGIHYGTYAAEVYRAGIENVPRGQWEAAKATNLTARQTWIHVILPQAIPPM 145 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 IP L + + + K + L A+ +L++ +I N + IE + + +L +S++ Sbjct: 146 IPALANYLIAMFKETPLLSAITVLELMNQAKSIANSNYRYIEPMTLVGVFFLIMSLISVF 205 Query: 384 FMNRLNAKIALKEKK 398 F+ L A+ + E++ Sbjct: 206 FLRWLEARYSRVEER 220 >gi|157964196|ref|YP_001499020.1| amino acid ABC transporter permease [Rickettsia massiliae MTU5] gi|157843972|gb|ABV84473.1| Amino acid ABC transporter permease protein [Rickettsia massiliae MTU5] Length = 218 Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 46/166 (27%), Positives = 87/166 (52%), Gaps = 29/166 (17%) Query: 191 VFSFVLGIVLSLF------ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244 +F V+G++L++ A RL +F+ + PLL + + F P + I +K+ + Sbjct: 31 IFGLVIGMLLAICKVNKNRALRLFANFYTSIFRGTPLLIQLSIIYFASPYI--IGVKFSV 88 Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304 FM+ I+ S + A+++E++R+G+ V +GQ EAA AL Sbjct: 89 ---------------------FMAGAISFSLNSGAYVSEVIRAGINTVDKGQFEAAEALA 127 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 + T+ ++LPQA+++I P L ++ +NL+K S++ +G DL+ Sbjct: 128 IPKFLITKDIILPQAVKNIFPSLVNELVNLIKESAIISMLGEMDLM 173 >gi|116618335|ref|YP_818706.1| ABC-type amino acid transport system, pemease component [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] gi|116097182|gb|ABJ62333.1| amino acid ABC transporter membrane protein, PAAT family [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] Length = 219 Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 31/74 (41%), Positives = 52/74 (70%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 ++LS AA+IAE RSG+ ++ GQ EAA LGL+ R +++PQA++ +IP L ++ Sbjct: 94 LSLSLNAAAYIAETFRSGIQSISEGQREAARTLGLSQFDTMRFIIVPQAIKIVIPALGNE 153 Query: 331 YLNLLKNSSLAVAV 344 +++L+K+SSL A+ Sbjct: 154 FISLIKDSSLVSAI 167 Score = 38.1 bits (87), Expect = 2.4, Method: Compositional matrix adjust. Identities = 19/62 (30%), Positives = 33/62 (53%) Query: 84 SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143 YA + G + T + G++ TI G ++ GR+S N +++ I + Y+ +FR P V Sbjct: 10 DYAPFFMHGLLYTLLFSLCGVVFGTIFGLIIALGRMSKNPVISGIFKTYIGLFRGTPLFV 69 Query: 144 VI 145 I Sbjct: 70 QI 71 >gi|329118223|ref|ZP_08246933.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Neisseria bacilliformis ATCC BAA-1200] gi|327465644|gb|EGF11919.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Neisseria bacilliformis ATCC BAA-1200] Length = 239 Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 53/156 (33%), Positives = 81/156 (51%), Gaps = 16/156 (10%) Query: 219 LPLLYISTFLIFGLPTLVLIALKY-----------QLHFDKPVLGQFNFI-----GGSTV 262 L L I+ L+FGL V+ A K +L + P+L Q F+ Sbjct: 43 LSLYGIALSLLFGLAVAVVTAYKIRPLYAPARAYIELSRNTPLLIQLFFLYYGLPKAGIK 102 Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322 F IAL+ A+++AE +R+G++AVP+GQ+EA A+GL+ + R V LPQA Sbjct: 103 WDGFTCGVIALAFLGASYMAEALRAGILAVPQGQIEAGKAVGLSRWQVFRYVELPQAWAV 162 Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN 358 +P + + L L+K +S+ AVG A+L+ V II Sbjct: 163 ALPAVGANVLFLIKETSVVSAVGVAELLFVTKDIIG 198 >gi|311108045|ref|YP_003980898.1| amino ABC transporter permease, 3-TM region, His/Glu/Gln/Arg/opine family domain-containing protein 17 [Achromobacter xylosoxidans A8] gi|310762734|gb|ADP18183.1| amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family domain protein 17 [Achromobacter xylosoxidans A8] Length = 216 Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 51/164 (31%), Positives = 77/164 (46%), Gaps = 10/164 (6%) Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287 L+ G+P L L+ Y F PV F+G P ++ +A YTAAF+ +I Sbjct: 58 LVQGVPLLGLLMFFY---FGMPV-----FLGIEV--PALTAVSVAFIIYTAAFLGQIWYG 107 Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347 G+ AV Q EAA LGL+ R V+ PQA R +PP + L+K +SLA VGF Sbjct: 108 GIQAVKHEQWEAAACLGLSKWHQFRHVIAPQAFRLSLPPTVGFLVQLIKGTSLASVVGFV 167 Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 +L G T Q + + +Y + + + ++ L + Sbjct: 168 ELARAGQIASAATFQPLLVYSCVALLYFAACLPLTMWARNLEGR 211 >gi|292492726|ref|YP_003528165.1| ectoine/hydroxyectoine ABC transporter permease protein EhuD [Nitrosococcus halophilus Nc4] gi|291581321|gb|ADE15778.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD [Nitrosococcus halophilus Nc4] Length = 217 Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 43/151 (28%), Positives = 85/151 (56%), Gaps = 5/151 (3%) Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302 QL+F VL +F G T+SP F++ + L + + + +E+ R+G+ VP GQ EAAIA Sbjct: 70 QLYFLFFVLPEF----GVTLSP-FLTGVVGLGLHYSTYTSEVYRAGIEGVPEGQWEAAIA 124 Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362 L ++ + ++LPQA+ +IP L + + + K++ L A+ +L+ +T + Sbjct: 125 LNMSRFHIWKAIILPQAIPPVIPALGNYLIAMFKDTPLLAAITVMELLQTAKLSGAETFR 184 Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393 +E + + ++L +S++ + + +L A+ A Sbjct: 185 YLEPLTLVGLLFLVISLLSSRLIRKLEARFA 215 Score = 38.5 bits (88), Expect = 2.1, Method: Compositional matrix adjust. Identities = 34/108 (31%), Positives = 50/108 (46%), Gaps = 11/108 (10%) Query: 82 DSSYATAILVGFVNTFWLA----FSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137 D YA IL + FW+ F GM A I+G R SA +++A I VE R Sbjct: 4 DWQYALDILPDLLRGFWVTIQATFWGMTAALILGLAWAILRRSAIRIMATITAWVVEFIR 63 Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIVL-PFGMFLNNRGLSFPTLTMD 184 + P LV ++FL+ +P+ + L PF + GL + T T + Sbjct: 64 STPLLVQLYFLF------FVLPEFGVTLSPFLTGVVGLGLHYSTYTSE 105 >gi|13470759|ref|NP_102328.1| ABC transporter permease [Mesorhizobium loti MAFF303099] gi|14021502|dbj|BAB48114.1| probable permease of ABC transporter [Mesorhizobium loti MAFF303099] Length = 239 Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 48/176 (27%), Positives = 88/176 (50%), Gaps = 14/176 (7%) Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVS-P 264 RL+ + + + LP L FG+P L L++ + + +P +T+ Sbjct: 58 RLAANIYTTVFRGLPELVTLFLFFFGMPIL----LQHLIRYFRP---------EATIDVN 104 Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 F++ I LS +++ +E+ S A+P+GQ E ++GL+ + RLV+LPQ +R Sbjct: 105 SFVAGMIVLSLIFSSYASEVFLSAFRAIPKGQYEGGYSIGLSKWQTMRLVILPQLLRIAF 164 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380 P L + +L+LLK++SL VG A+ + G T + I ++L L+++ Sbjct: 165 PGLENCWLSLLKDTSLVSVVGLAETLRNAGVAARVTKHSFLFYSIAALVFLGLAVV 220 >gi|331697743|ref|YP_004333982.1| polar amino acid ABC transporter inner membrane subunit [Pseudonocardia dioxanivorans CB1190] gi|326952432|gb|AEA26129.1| polar amino acid ABC transporter, inner membrane subunit [Pseudonocardia dioxanivorans CB1190] Length = 299 Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 33/85 (38%), Positives = 57/85 (67%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 + SL + L Y + +AE+ R+G+ A+PRGQ EAA ALGL + VLLPQ++R+++P Sbjct: 136 YWSLVLGLMLYNGSVLAEVFRAGVRALPRGQSEAAYALGLRKTQVMTNVLLPQSLRAMLP 195 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLV 350 + SQ + +LK+++L + + +L+ Sbjct: 196 TIVSQLVVVLKDTALGFIILYPELL 220 >gi|324991488|gb|EGC23421.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK353] Length = 219 Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 37/127 (29%), Positives = 76/127 (59%), Gaps = 4/127 (3%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I+ + +T+A +AEI+R GL A+ GQ EA ++ G T + R ++LPQA+R ++P + SQ Sbjct: 89 ISFTVFTSAALAEIIRGGLNAIDPGQTEAGLSQGFTQFQILRYIILPQAIRKMLPAIISQ 148 Query: 331 YLNLLKNSSLAVAV-GFADLVSVGGTIINQTGQAIEIILIWMF---IYLSLSIMIALFMN 386 ++ ++K++SL +V +L ++ + +A ++ +++ IY ++ I+ F Sbjct: 149 FVTVIKDTSLLYSVIALQELFGSAQILMGRYFEAEQVFALYLLVAVIYFLINFAISSFSR 208 Query: 387 RLNAKIA 393 +L+ + A Sbjct: 209 KLSQRWA 215 Score = 41.2 bits (95), Expect = 0.26, Method: Compositional matrix adjust. Identities = 22/61 (36%), Positives = 36/61 (59%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 IL G T ++F ++ +TI GT++ R NKL+ I +Y+E RN+P L+ IF + Sbjct: 16 ILKGLWLTLQISFISIVLSTIFGTILAVMRNGKNKLLKLIASIYIEFVRNVPNLLWIFTI 75 Query: 149 Y 149 + Sbjct: 76 F 76 >gi|312962619|ref|ZP_07777109.1| amino acid ABC transporter, permease protein [Pseudomonas fluorescens WH6] gi|311283199|gb|EFQ61790.1| amino acid ABC transporter, permease protein [Pseudomonas fluorescens WH6] Length = 232 Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 52/167 (31%), Positives = 85/167 (50%), Gaps = 11/167 (6%) Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL----YIALSCYTA 278 ++ T++I G P LV + L Y L QF + S + P S +A + T+ Sbjct: 56 WLYTYVIRGTPMLVQLFLIYY------GLAQFEAVRESFLWPLLSSATFCACLAFAINTS 109 Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338 A+ AEI+ L A P G++EAA A+G++ K R +LLP A+R +P +++ + +L+ + Sbjct: 110 AYTAEIIAGSLKATPNGEIEAAKAMGMSRYKLYRRILLPSALRRALPQYSNEVIMMLQTT 169 Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS-IMIALF 384 SLA V D+ T+ Q E + YL L+ I++ LF Sbjct: 170 SLASIVTLIDITGAARTVNAQFYLPFEAYITAGAFYLCLTFILVRLF 216 >gi|167908583|ref|ZP_02495788.1| amino acid ABC transporter, permease/ATP-binding protein [Burkholderia pseudomallei NCTC 13177] Length = 340 Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 47/141 (33%), Positives = 81/141 (57%), Gaps = 6/141 (4%) Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH-RKATRLVLLPQAM 320 +SP F + + L+ AAF AE +R G+++V +GQ+EAA ALGL R+ATR+V LPQAM Sbjct: 181 ISP-FCAAVLGLTLNHAAFAAEGIRGGILSVDQGQLEAAAALGLPRARQATRIV-LPQAM 238 Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL---IWMFIYLSL 377 R+ +P + + L K SS+ + +L I + + I +++ +W I L++ Sbjct: 239 RAFLPVAFNDLIALAKGSSMVYVLAMPELFYTVQVIYRRNLEVIPLLMVATVWYLIILTV 298 Query: 378 SIMIALFMNRLNAKIALKEKK 398 ++ + R A+ A++E + Sbjct: 299 LSIVQAQVERRYARGAVREPE 319 >gi|302537787|ref|ZP_07290129.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces sp. C] gi|302446682|gb|EFL18498.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces sp. C] Length = 292 Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 57/220 (25%), Positives = 102/220 (46%), Gaps = 30/220 (13%) Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALK 241 T+ A V S VLG VL+ RLS H + L + + + + + +ALK Sbjct: 79 TLKAFAYASVLSLVLGAVLA--TGRLSVHRPVRWAATLCVEFFRAMPVLVMIFFIFVALK 136 Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301 Q +L L+ Y + +AE+ R+G+ AV +GQ EAA Sbjct: 137 VQ---------------------PLPALVAGLTLYNGSVLAEVFRTGVNAVEKGQREAAY 175 Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361 ALG+ + VL PQA+R+++P + SQ + LK++SL + + + + G I + Sbjct: 176 ALGMRKTQVMTFVLAPQAVRAMLPTIISQLVVALKDTSLGFLITYEEFLHAGKLIASNLD 235 Query: 362 QA---IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 I +++I IY+ + ++++ F +A +E++ Sbjct: 236 YDLPFIPVVMIISPIYIGMCMLLSWFAT----WVARRERR 271 Score = 43.9 bits (102), Expect = 0.044, Method: Compositional matrix adjust. Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 4/93 (4%) Query: 70 FEIDQGIVPYTSDSSYA---TAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVA 126 F+ DQ S Y +L G NT + + ++G ++ GRLS ++ V Sbjct: 50 FDTDQFTAAKWSPFEYEGIQELLLKGLGNTLKAFAYASVLSLVLGAVLATGRLSVHRPVR 109 Query: 127 WICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIP 159 W + VE FR +P LV+IFF++ + L V P+P Sbjct: 110 WAATLCVEFFRAMPVLVMIFFIFVA-LKVQPLP 141 >gi|227877754|ref|ZP_03995788.1| ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus crispatus JV-V01] gi|256843607|ref|ZP_05549095.1| ABC amino acid transporter [Lactobacillus crispatus 125-2-CHN] gi|256850083|ref|ZP_05555513.1| amino acid ABC transporter permease [Lactobacillus crispatus MV-1A-US] gi|312984336|ref|ZP_07791678.1| amino acid ABC transporter, permease protein [Lactobacillus crispatus CTV-05] gi|227862657|gb|EEJ70142.1| ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus crispatus JV-V01] gi|256615027|gb|EEU20228.1| ABC amino acid transporter [Lactobacillus crispatus 125-2-CHN] gi|256713055|gb|EEU28046.1| amino acid ABC transporter permease [Lactobacillus crispatus MV-1A-US] gi|310894261|gb|EFQ43341.1| amino acid ABC transporter, permease protein [Lactobacillus crispatus CTV-05] Length = 223 Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 53/180 (29%), Positives = 90/180 (50%), Gaps = 27/180 (15%) Query: 222 LYISTFLIFGLPTLVLIALKY-----QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 LY+ F I +PT+VL+ L Y LH + P +M++ +A S + Sbjct: 60 LYLEFFRI--VPTVVLLYLVYYILPRSLHVNWPA--------------TWMAV-LAFSMW 102 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 AA ++IVR L +VP+ Q E+ +ALGL + R VLLPQA++ +P + ++K Sbjct: 103 VAAEFSDIVRGALESVPKTQRESGLALGLNRLQLFRYVLLPQAVKLELPATINLATRVIK 162 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF-----IYLSLSIMIALFMNRLNAK 391 +SL + + ++++VG II Q + W++ +Y L ++ + RL AK Sbjct: 163 TTSLLMIINIMEVINVGQQIIEANNQQYPAGVFWVYGFIFILYFILDYPLSAWAKRLTAK 222 Score = 38.5 bits (88), Expect = 1.7, Method: Compositional matrix adjust. Identities = 18/68 (26%), Positives = 38/68 (55%) Query: 82 DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141 + S ++ G + W+A +I +GT+ G R N+ + ++ R+Y+E FR +P Sbjct: 11 EGSNFARLMAGLWTSIWIAALSLIIGLAVGTIFGILRTLKNRPIRFVLRLYLEFFRIVPT 70 Query: 142 LVVIFFLY 149 +V+++ +Y Sbjct: 71 VVLLYLVY 78 >gi|330958424|gb|EGH58684.1| amino acid ABC transporter permease [Pseudomonas syringae pv. maculicola str. ES4326] Length = 216 Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 36/121 (29%), Positives = 60/121 (49%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I L CY AA+IAE R + +P GQ EAA AL R ++LPQA++ ++P L + Sbjct: 93 IGLGCYYAAYIAEACRGAIEDIPAGQWEAARALDFDRGDTWRRIILPQALKPMLPVLGNY 152 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 + + K + L + +L I T + E + ++L++S+ +L N L Sbjct: 153 LIGMFKETPLLAVITIPELFQAAKQIAGMTYRYNEPYTVMALMFLAISVPTSLLFNYLER 212 Query: 391 K 391 + Sbjct: 213 R 213 >gi|323126802|gb|ADX24099.1| hypothetical protein SDE12394_02845 [Streptococcus dysgalactiae subsp. equisimilis ATCC 12394] Length = 215 Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 30/73 (41%), Positives = 50/73 (68%) Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 A + +T+A +AEI+R GL AV GQ EA ++ G TH + L++ PQA R ++P + SQ+ Sbjct: 87 AFTVFTSAALAEIIRGGLNAVNHGQTEAGLSQGFTHFQVFCLIIFPQAFRKMLPAIISQF 146 Query: 332 LNLLKNSSLAVAV 344 + ++K++SL +V Sbjct: 147 VTVIKDTSLLYSV 159 >gi|160941548|ref|ZP_02088880.1| hypothetical protein CLOBOL_06446 [Clostridium bolteae ATCC BAA-613] gi|158435513|gb|EDP13280.1| hypothetical protein CLOBOL_06446 [Clostridium bolteae ATCC BAA-613] Length = 234 Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 38/126 (30%), Positives = 76/126 (60%), Gaps = 8/126 (6%) Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 A+ +EI+R+ ++++P+GQ EAA++LG+++ + ++LPQA + +PPL + ++ L+K+ Sbjct: 102 GAYSSEIIRAAILSIPKGQWEAAMSLGMSYPQQLLRIILPQAFKISVPPLFNSFIALVKD 161 Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM---FIYLSLSIMIALFMNRLNAKIAL 394 +SLA + ++ I T + E +L+++ FIYL ++ NR+ K+ L Sbjct: 162 TSLAANITIPEMFLTTQRI---TARNYEPLLMYIEVGFIYLIFCTVLNYVQNRIENKLML 218 Query: 395 --KEKK 398 +KK Sbjct: 219 TPTDKK 224 >gi|52425331|ref|YP_088468.1| ArtM protein [Mannheimia succiniciproducens MBEL55E] gi|52307383|gb|AAU37883.1| ArtM protein [Mannheimia succiniciproducens MBEL55E] Length = 238 Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 46/159 (28%), Positives = 83/159 (52%), Gaps = 18/159 (11%) Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281 +YIS +I G P LV I++ + + P LG F + P + I S A+ Sbjct: 75 VYIS--IIRGTPMLVQISVVF---YGLPALGIF-------IDP-IPAAIIGFSLNIGAYA 121 Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341 +E VR+ + +VP+GQ EA +G+++ + R ++ PQA R +PPL++ ++ L K++SLA Sbjct: 122 SETVRAAISSVPKGQWEAGYTIGMSYMQTFRRIIAPQAFRVAVPPLSNTFIGLFKDTSLA 181 Query: 342 VAVGFADLVSVGGTIINQTGQAIEI-----ILIWMFIYL 375 V ++ V + N + + I ++ W F ++ Sbjct: 182 SVVTVTEMFRVAQQMANMSYDFLPIYIEAGLIYWCFCWV 220 >gi|327478629|gb|AEA81939.1| amino acid ABC transporter, permease protein [Pseudomonas stutzeri DSM 4166] Length = 219 Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 42/123 (34%), Positives = 65/123 (52%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + L A+ AE++R + +V RGQ EA AL +T R ++LPQA+ + IPP T+ Sbjct: 88 VGLGLNIGAYGAEVLRGAIRSVHRGQHEACHALNMTPLTRMRRIILPQALLAAIPPGTNL 147 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 + LLKN+SL + +DL + T +EI + + IY L+ I M RL Sbjct: 148 LIELLKNTSLVSLITLSDLAFRARQLDQATLMTLEIFGLALVIYFVLAQTINFAMRRLEQ 207 Query: 391 KIA 393 ++A Sbjct: 208 RLA 210 >gi|241764989|ref|ZP_04762986.1| polar amino acid ABC transporter, inner membrane subunit [Acidovorax delafieldii 2AN] gi|241365423|gb|EER60210.1| polar amino acid ABC transporter, inner membrane subunit [Acidovorax delafieldii 2AN] Length = 266 Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 51/160 (31%), Positives = 87/160 (54%), Gaps = 13/160 (8%) Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFM-SLYIALSCYTAAFIAEIVRSGL 289 G PTL+LI + + VL Q G +S +M +L + LS TAA +AE+ R+G+ Sbjct: 115 GTPTLLLIYVCFL------VLPQ----AGIKLSTYWMLTLPVGLS--TAAVVAEVYRAGV 162 Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349 +AVPRGQ AA +LGLT + ++ PQA+R I+P L +Q + ++K+++ V + +L Sbjct: 163 LAVPRGQTNAARSLGLTEAQVFFHIVFPQALRYIVPALVAQLVIVVKDTTFGYVVTYGEL 222 Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 + II + + L+ +Y ++ I+ R+ Sbjct: 223 MQNAKVIIANYHALVPVYLVVAALYCLVNYAISRASKRIG 262 >gi|217422535|ref|ZP_03454038.1| ABC-type polar amino acid transport system, ATPase component [Burkholderia pseudomallei 576] gi|217394766|gb|EEC34785.1| ABC-type polar amino acid transport system, ATPase component [Burkholderia pseudomallei 576] Length = 617 Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 47/141 (33%), Positives = 81/141 (57%), Gaps = 6/141 (4%) Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH-RKATRLVLLPQAM 320 +SP F + + L+ AAF AE +R G+++V +GQ+EAA ALGL R+ATR+V LPQAM Sbjct: 164 ISP-FCAAVLGLTLNHAAFAAEGIRGGILSVDQGQLEAAAALGLPRARQATRIV-LPQAM 221 Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL---IWMFIYLSL 377 R+ +P + + L K SS+ + +L I + + I +++ +W I L++ Sbjct: 222 RAFLPVAFNDLIALAKGSSMVYVLAMPELFYTVQVIYRRNLEVIPLLMVATVWYLIILTV 281 Query: 378 SIMIALFMNRLNAKIALKEKK 398 ++ + R A+ A++E + Sbjct: 282 LSIVQAQVERRYARGAVREPE 302 >gi|149191816|ref|ZP_01870053.1| amino acid ABC transporter, permease protein [Vibrio shilonii AK1] gi|148834334|gb|EDL51334.1| amino acid ABC transporter, permease protein [Vibrio shilonii AK1] Length = 246 Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 61/231 (26%), Positives = 110/231 (47%), Gaps = 30/231 (12%) Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY---QL 244 ++ + S +L + L + L++ K +A+ LY T +I G+P LVL+ L + Q+ Sbjct: 20 EVAILSLLLAMFLGMLGA-LAKLAPYKWARAIATLY--TTIIRGIPDLVLMMLIFFGGQI 76 Query: 245 HFDKPVLGQFNFIGGSTVSPE-------FMSLYIALSCYTA----------AFIAEIVRS 287 + + ++ +S + ++ YI +S + A A++AE R Sbjct: 77 LLNNSLYAVNEWLNNWFMSSDPNHEWTSYLPDYIDVSPFVAGVLTIGFIFGAYMAETFRG 136 Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347 ++AV +G+MEAA A G++ A R +LLPQ +R +P + +L LLK ++L +G Sbjct: 137 AIMAVDKGEMEAAKAYGMSSVLAFRRILLPQMIRHALPGFGNNWLVLLKTTALVSIIGLE 196 Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 D+V V T Y+S++I+ LF + + L E+K Sbjct: 197 DMVRVSSLAAGSTKMPFT-------FYMSVAIIFLLFTSISTGFLKLVERK 240 >gi|139439229|ref|ZP_01772671.1| Hypothetical protein COLAER_01685 [Collinsella aerofaciens ATCC 25986] gi|133775253|gb|EBA39073.1| Hypothetical protein COLAER_01685 [Collinsella aerofaciens ATCC 25986] Length = 217 Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 37/123 (30%), Positives = 72/123 (58%), Gaps = 6/123 (4%) Query: 256 FIGGSTVSPE--FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313 ++ G +++P+ + + +A A + AEI RSGL ++PRGQ EAA LG + + Sbjct: 75 YVFGISLTPDSKWTACVVAFIINYAGYFAEIYRSGLQSIPRGQYEAAEVLGYSRVQTFLY 134 Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII-NQTGQ---AIEIILI 369 +++PQ + I+P + ++ + L+K++SLA A+G ++ S ++ +Q AI ++ Sbjct: 135 IVMPQVAKRILPAMGNEIITLVKDTSLAFAIGVGEMFSTAKALVASQVSMVPFAIAALIY 194 Query: 370 WMF 372 W+F Sbjct: 195 WVF 197 >gi|113868712|ref|YP_727201.1| ABC transporter permease [Ralstonia eutropha H16] gi|113527488|emb|CAJ93833.1| ABC-type transporter, permease component: PAAT family [Ralstonia eutropha H16] Length = 227 Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 57/195 (29%), Positives = 93/195 (47%), Gaps = 30/195 (15%) Query: 181 LTMDTNAKIFVFSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIFGLPT 234 LT+ + VF FVLG L++ T R + + PL+ + +L FGL Sbjct: 23 LTLRMSVATIVFGFVLGTALAVVRTQGPAWARRCVTVYVDVIRNTPLVIQAFWLFFGLAA 82 Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294 + P + +AL +A+ EIVR+G+ +VPR Sbjct: 83 V------------------------QVRVPAMAAAVVALVVNVSAYTTEIVRAGIESVPR 118 Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354 GQ+EAA LGL+ + RLV+LPQA+ + P L SQ++ ++ +S+ + +L +VG Sbjct: 119 GQLEAASCLGLSRWQMLRLVVLPQAVERMYPALISQFVLMMLATSIMSQISAEELTAVGY 178 Query: 355 TIINQTGQAIEIILI 369 I ++T + EI L+ Sbjct: 179 RIQSETFRGFEIYLV 193 >gi|73661927|ref|YP_300708.1| ABC-type amino acid transport system permease component [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] gi|72494442|dbj|BAE17763.1| ABC-type amino acid transport system permease component [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] Length = 232 Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 45/174 (25%), Positives = 92/174 (52%), Gaps = 13/174 (7%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKY-QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSC 275 ++ PL+ + +GLP +L ++ Q H + + SP ++ +I S Sbjct: 59 RSTPLIVQLFIVYYGLPAFILFLNEHLQWHINPDIF-----------SPLIIA-FIVFSL 106 Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335 + A+++E ++SGL +V Q+EAA ++GLT + ++LPQA +P + +Q++ L+ Sbjct: 107 HAVAYLSESIKSGLQSVDYEQIEAAQSVGLTRFHIYKEIVLPQAFAYALPNIENQFIMLI 166 Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 K +SLA AV ++++V I N+ + I + + Y L++++ N++ Sbjct: 167 KGTSLAFAVQVTEIMAVSHIIANEGYRFITVYTVAAMFYWLLAMILEYIFNKME 220 >gi|323528627|ref|YP_004230779.1| ectoine/hydroxyectoine ABC transporter permease EhuC [Burkholderia sp. CCGE1001] gi|323385629|gb|ADX57719.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC [Burkholderia sp. CCGE1001] Length = 219 Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 39/123 (31%), Positives = 67/123 (54%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + L + A+ +EI+R L +VP GQ EAA+AL L+ R ++LPQAM + +PP T+ Sbjct: 88 VGLGLHYGAYGSEILRGALRSVPGGQFEAALALNLSPLTRMRRIVLPQAMINALPPATNL 147 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 + LLK +SL + +DL + T + EI ++ + IY L+ ++ M Sbjct: 148 MIELLKGTSLVSLITLSDLTFRARQLDEATFRTAEIFMLTLVIYFVLAQVLVAVMRHFER 207 Query: 391 KIA 393 +++ Sbjct: 208 RVS 210 >gi|291548167|emb|CBL21275.1| amino acid ABC transporter membrane protein, PAAT family (TC 3.A.1.3.-) [Ruminococcus sp. SR1/5] Length = 211 Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 39/136 (28%), Positives = 80/136 (58%), Gaps = 3/136 (2%) Query: 256 FIGGSTVSPEF--MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313 FI G +S + ++++IA + AA+ AEI R G+ ++P GQ EAA LG + Sbjct: 70 FIFGIRISMGYSLIAVFIAFAINYAAYFAEIYRGGIESMPVGQYEAAKILGYNKVQTFFR 129 Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI 373 ++LPQ ++ I+P +T++ + L+K++SLA V A++ ++ I + + ++ +F Sbjct: 130 IILPQVIKRILPSITNEVITLVKDTSLAFVVAVAEMFTIAKQIASAQTTMMPFVIAAIFY 189 Query: 374 YLSLSIMIALFMNRLN 389 Y+ ++++A+ M ++ Sbjct: 190 YV-FNLIVAVVMQKVE 204 >gi|270292047|ref|ZP_06198262.1| amino acid ABC transporter, permease protein [Streptococcus sp. M143] gi|270279575|gb|EFA25417.1| amino acid ABC transporter, permease protein [Streptococcus sp. M143] Length = 230 Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 27/82 (32%), Positives = 55/82 (67%) Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 +A +AE+ ++ A+P+GQ EA +++GLT + ++ PQA + +P +T+ LNL+++ Sbjct: 109 SAIVAEVFKAAYQAIPKGQTEAGLSIGLTPSQTFWRIIFPQAFQVALPNITTAILNLMRD 168 Query: 338 SSLAVAVGFADLVSVGGTIINQ 359 ++LA +GF D++ G +I++ Sbjct: 169 AALAYTIGFVDVMGAGNLLISR 190 >gi|167840667|ref|ZP_02467351.1| ABC transporter, inner-membrane component [Burkholderia thailandensis MSMB43] Length = 220 Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 35/119 (29%), Positives = 71/119 (59%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P F++ I LS T A+ ++I+ +G A+ GQ+EAA+ LT R+ + +PQ MR+ Sbjct: 88 PGFVAAAIGLSLNTGAYQSQILGAGFRAIAPGQIEAALTFNLTRRQVLWHIEVPQVMRAT 147 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382 +P L S+ ++++K S++ + DL+ VG + + + + +E+ + YL+++ ++A Sbjct: 148 LPALVSEMIDIVKASAVVSVISVTDLMRVGQQLSSSSYRPLEVYSLAAVFYLAITSLLA 206 >gi|113866799|ref|YP_725288.1| ABC transporter permease [Ralstonia eutropha H16] gi|113525575|emb|CAJ91920.1| ABC-type transporter, permease component: PAAT family [Ralstonia eutropha H16] Length = 219 Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 58/209 (27%), Positives = 104/209 (49%), Gaps = 18/209 (8%) Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249 VF +LG V++L H + KA Y+S ++ G P LV I + +++ P Sbjct: 29 MVFGLMLGTVVALMGIS-----HSRVLKAAARTYVS--IMRGTPLLVQI---FVVYYGLP 78 Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309 +G + P + + LS A+++E +R ++ V RGQ AA +LGLT + Sbjct: 79 GIG-------IALEPTPAGV-LTLSLNVGAYLSESMRGAILGVSRGQWLAAYSLGLTPAQ 130 Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369 A R V+ PQA+R +P L++ ++L+K++SL + +L+ +I T Q + + L Sbjct: 131 ALRYVIGPQALRLAVPSLSNSLISLIKDTSLVSVITVTELLRTAQEVIAATYQPLPLYLA 190 Query: 370 WMFIYLSLSIMIALFMNRLNAKIALKEKK 398 IY LS ++ + L +++L + Sbjct: 191 VAAIYWVLSTGLSGVQHMLERRLSLPGRH 219 >gi|16264164|ref|NP_436956.1| putative amino acid ABC transporter permease protein [Sinorhizobium meliloti 1021] gi|15140289|emb|CAC48816.1| EhuD [Sinorhizobium meliloti 1021] Length = 220 Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 41/135 (30%), Positives = 73/135 (54%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P ++ I L + + AE+ R+G+ VPRGQ EAA A LT R+ V+LPQA+ + Sbjct: 86 PALVAGVIGLGIHYGTYAAEVYRAGIENVPRGQWEAAKATNLTARQTWIHVILPQAIPPM 145 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 IP L + + + K + L A+ +L++ +I N + IE + + +L +S++ Sbjct: 146 IPALANYLIAMFKETPLLSAITVLELMNQAKSIANSNYRYIEPMTLVGVFFLIMSLISVF 205 Query: 384 FMNRLNAKIALKEKK 398 F+ L A+ + E++ Sbjct: 206 FLRWLEARYSRVEER 220 >gi|125718376|ref|YP_001035509.1| ABC transporter membrane-spanning permease, arginine/histidine transport, putative [Streptococcus sanguinis SK36] gi|323351207|ref|ZP_08086863.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis VMC66] gi|125498293|gb|ABN44959.1| ABC transporter membrane-spanning permease, arginine/histidine transport, putative [Streptococcus sanguinis SK36] gi|322122431|gb|EFX94142.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis VMC66] Length = 219 Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 37/127 (29%), Positives = 76/127 (59%), Gaps = 4/127 (3%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I+ + +T+A +AEI+R GL A+ GQ EA ++ G T + R ++LPQA+R ++P + SQ Sbjct: 89 ISFTVFTSAALAEIIRGGLNAIDPGQTEAGLSQGFTQFQILRYIILPQAIRKMLPAIISQ 148 Query: 331 YLNLLKNSSLAVAV-GFADLVSVGGTIINQTGQAIEIILIWMF---IYLSLSIMIALFMN 386 ++ ++K++SL +V +L ++ + +A ++ +++ IY ++ I+ F Sbjct: 149 FVTVIKDTSLLYSVIALQELFGSAQILMGRYFEAEQVFALYLLVAAIYFLINFAISSFSR 208 Query: 387 RLNAKIA 393 +L+ + A Sbjct: 209 KLSQRWA 215 Score = 41.2 bits (95), Expect = 0.26, Method: Compositional matrix adjust. Identities = 22/61 (36%), Positives = 36/61 (59%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 IL G T ++F ++ +TI GT++ R NKL+ I +Y+E RN+P L+ IF + Sbjct: 16 ILKGLWLTLQISFISIVLSTIFGTILAVMRNGKNKLLKLIASIYIEFVRNVPNLLWIFTI 75 Query: 149 Y 149 + Sbjct: 76 F 76 >gi|209516319|ref|ZP_03265176.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. H160] gi|209503255|gb|EEA03254.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. H160] Length = 218 Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 38/140 (27%), Positives = 73/140 (52%), Gaps = 1/140 (0%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G VSP + + + L+ YT+A++ +I R + AVPRGQ A +LG+T + R ++ PQ Sbjct: 80 GIDVSP-WAAATVTLTLYTSAYLVDIWRGCVEAVPRGQWAAGASLGMTFGQQLRYIVWPQ 138 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378 A++ + P + ++K+++LA +GF +L G I N + I + IY ++ Sbjct: 139 ALKIAVAPTVGFLVQVVKSTALASIIGFTELTKTGTMITNAAFRPFPIYGMVAMIYFAMC 198 Query: 379 IMIALFMNRLNAKIALKEKK 398 + + L + + + + Sbjct: 199 FPLTWYARVLEKRQKVGQHR 218 >gi|325924206|ref|ZP_08185766.1| amino acid ABC transporter membrane protein, PAAT family [Xanthomonas gardneri ATCC 19865] gi|325545337|gb|EGD16631.1| amino acid ABC transporter membrane protein, PAAT family [Xanthomonas gardneri ATCC 19865] Length = 583 Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 33/76 (43%), Positives = 51/76 (67%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 +F + + LS AAF AEI+R G+++V +GQ EA+ ALGL + R ++LPQAMR+I+ Sbjct: 163 QFAAAVLGLSLNQAAFSAEIIRGGILSVDQGQFEASAALGLPRVRQIRRIVLPQAMRTIL 222 Query: 325 PPLTSQYLNLLKNSSL 340 P + +NL K +S+ Sbjct: 223 PGAFNDVINLAKGTSV 238 >gi|296532450|ref|ZP_06895174.1| ABC superfamily ATP binding cassette transporter, membrane protein [Roseomonas cervicalis ATCC 49957] gi|296267225|gb|EFH13126.1| ABC superfamily ATP binding cassette transporter, membrane protein [Roseomonas cervicalis ATCC 49957] Length = 226 Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 39/119 (32%), Positives = 66/119 (55%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P F + IAL+ + A +AE +R + +VP GQMEAA A+GL + V+LPQA+R + Sbjct: 93 PAFWAGVIALTAFATAHVAETLRGAVESVPAGQMEAAKAIGLRFPQRLAYVVLPQALRRM 152 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382 +PP + L ++K ++L +G +L+ ++ + I+ L YL ++ IA Sbjct: 153 LPPWVNTGLEVVKGTTLLSVIGVVELLLASQQVMARNYLIIDFYLTAGLFYLVINAAIA 211 >gi|261823279|ref|YP_003261385.1| polar amino acid ABC transporter inner membrane protein [Pectobacterium wasabiae WPP163] gi|261607292|gb|ACX89778.1| polar amino acid ABC transporter, inner membrane subunit [Pectobacterium wasabiae WPP163] Length = 238 Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 53/187 (28%), Positives = 89/187 (47%), Gaps = 12/187 (6%) Query: 220 PLLYIS---TFLIFGLPTLVLIALKY-----QLHFDKPVLGQFNFIGGSTVSPEFMSLYI 271 P+ Y++ T LI G+P L++I L Y L + G F G P F++ + Sbjct: 56 PVRYLADGYTTLIRGVPDLLIIYLLYFGGSSALTLLAKLFGSNEFFG----FPGFLAGVL 111 Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 A+ + A E+ R AV +G++EAA A G+ R +++P +R IPPL + + Sbjct: 112 AVGISSGAQQTEVYRGAFYAVSKGEIEAAKACGMPTLLRLRRIIIPLLLRHAIPPLGNVW 171 Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 +LK S+L G A+L++ T TG+ + + +YL +SI M R + Sbjct: 172 QLVLKTSALVSVTGVAELMTQSQTGAGSTGKPFDFFMAAALLYLLISICSGWIMRRAESH 231 Query: 392 IALKEKK 398 + K+ Sbjct: 232 YSRGVKR 238 Score = 38.5 bits (88), Expect = 1.8, Method: Compositional matrix adjust. Identities = 18/69 (26%), Positives = 35/69 (50%) Query: 81 SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140 + + +L+G T LA G + +IGT+ ++ N+ V ++ Y + R +P Sbjct: 13 GEHGWGKLLLIGAGMTIALAIGGFLLGAVIGTIGAWSKICGNRPVRYLADGYTTLIRGVP 72 Query: 141 PLVVIFFLY 149 L++I+ LY Sbjct: 73 DLLIIYLLY 81 >gi|238919597|ref|YP_002933112.1| L-cystine transport system permease protein TcyB [Edwardsiella ictaluri 93-146] gi|238869166|gb|ACR68877.1| L-cystine transport system permease protein TcyB [Edwardsiella ictaluri 93-146] Length = 232 Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 53/185 (28%), Positives = 90/185 (48%), Gaps = 26/185 (14%) Query: 206 RLSRHFHEKTGKALPLLYISTFLIF-GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP 264 RL F+ + PLL + FLIF GLP+ G T+ Sbjct: 66 RLCADFYIWVFRGTPLL-VQLFLIFYGLPS-----------------------AGITLD- 100 Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 F + I + A+ +EIVR +++VP+GQ EAA A+G++ +A R V+LPQ+ + Sbjct: 101 AFPAALIGFTLNVGAYSSEIVRGAILSVPQGQWEAASAIGMSSSQAMRRVILPQSAFVSL 160 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 PPL++ +++L+K++SLA + ++ I+ + + I IYL+ S ++ Sbjct: 161 PPLSNVFISLIKDTSLAAVITVPEMFLAAQRIVAVNYEPLIIYSETALIYLAFSTLLGKL 220 Query: 385 MNRLN 389 RL Sbjct: 221 QLRLE 225 >gi|227544223|ref|ZP_03974272.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus reuteri CF48-3A] gi|300908218|ref|ZP_07125684.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus reuteri SD2112] gi|227185794|gb|EEI65865.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus reuteri CF48-3A] gi|300894645|gb|EFK88001.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus reuteri SD2112] Length = 215 Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 36/112 (32%), Positives = 67/112 (59%), Gaps = 1/112 (0%) Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 AA+ AEI R G +V +GQ EAA L L++ + R +++PQ ++ +IP + ++ +NL+K+ Sbjct: 98 AAYFAEIFRGGFQSVDQGQFEAARVLRLSYWQTLRKIIIPQVIKIVIPSIGNEVINLVKD 157 Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 SSL +G DL+ G ++ + ++L+ + IYL L + L + ++ Sbjct: 158 SSLVYVIGLGDLLRAGNVATSRDVTLVPLMLVGL-IYLILVGICTLILRQVE 208 >gi|212213032|ref|YP_002303968.1| arginine transport system permease protein [Coxiella burnetii CbuG_Q212] gi|212011442|gb|ACJ18823.1| arginine transport system permease protein [Coxiella burnetii CbuG_Q212] Length = 223 Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 51/173 (29%), Positives = 91/173 (52%), Gaps = 10/173 (5%) Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNF----IGGSTVSPEFMSLYIALSCYTAAFIA 282 F+I G P LV I + Y GQF++ I S + F IAL+ T+A+ Sbjct: 55 FIIRGTPLLVQIFIIYYGS------GQFHWLRETILWSVLKRPFGCAIIALAINTSAYTT 108 Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342 ++R + ++P GQ+EAA ALGL+ KA + +++P+A+ ++P +++ + +LK +SLA Sbjct: 109 VLLRGAIRSIPTGQIEAAKALGLSRWKAYQRIIIPRAICIVLPAYSNEVIMILKGTSLAG 168 Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395 + D++ V +I T + I + + IY L+ +I L K+ + Sbjct: 169 TITLMDIMGVTRHLIAMTYEVIPLFFLAGIIYFVLNALIMSVFYFLEKKLTFQ 221 >gi|91778282|ref|YP_553490.1| ABC amino acid transporter, inner membrane subunit [Burkholderia xenovorans LB400] gi|91690942|gb|ABE34140.1| amino acid ABC transporter membrane protein 1, PAAT family [Burkholderia xenovorans LB400] Length = 240 Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 55/199 (27%), Positives = 98/199 (49%), Gaps = 12/199 (6%) Query: 204 ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL----GQFNFIGG 259 A +LSR +T + + +Y + F G+P L++I Y +F L GQ+ G Sbjct: 45 AAKLSRL---RTLRVIGDIYTTVFR--GVPELLVI---YLFYFGGSTLVTNVGQWFGAEG 96 Query: 260 STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319 P F+ +A+ + A+ AE+ RS ++AV RG++EAA A+G+ R +L+PQ Sbjct: 97 FVGVPPFVIGALAVGMISGAYQAEVYRSAVLAVSRGELEAARAIGMPTLTMARRILIPQV 156 Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379 +R +P + + + LK+S+L G A+L+ T Q ++ +YL ++ Sbjct: 157 LRFALPGIGNVWQLSLKDSALISVTGLAELLRTSQVAAGSTHQYFTFFVVGGALYLLMTS 216 Query: 380 MIALFMNRLNAKIALKEKK 398 + NR A++ K+ Sbjct: 217 ISNRVFNRAEARVGRSFKR 235 >gi|154245547|ref|YP_001416505.1| polar amino acid ABC transporter, inner membrane subunit [Xanthobacter autotrophicus Py2] gi|154159632|gb|ABS66848.1| polar amino acid ABC transporter, inner membrane subunit [Xanthobacter autotrophicus Py2] Length = 227 Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 41/125 (32%), Positives = 72/125 (57%), Gaps = 1/125 (0%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G+ + P F + IAL A+ AEI+R+G ++P+GQ+EAA L LT +A V LPQ Sbjct: 84 GAKIGP-FPAAVIALVVNVGAYTAEIMRAGFRSIPKGQIEAAHCLALTPTQALWSVQLPQ 142 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378 A+ + P L SQ++ ++ +++ + +L V I + T + E+ L+ IYL+++ Sbjct: 143 AVERVYPALVSQFVLMMLATAIMSQISAEELTGVAYMIQSFTFRGFEVYLVIAVIYLAMA 202 Query: 379 IMIAL 383 ++ L Sbjct: 203 SLLRL 207 Score = 37.7 bits (86), Expect = 3.4, Method: Compositional matrix adjust. Identities = 23/75 (30%), Positives = 34/75 (45%), Gaps = 4/75 (5%) Query: 79 YTSDSSYATAILVGFVNTFWLAF----SGMIPATIIGTLVGAGRLSANKLVAWICRVYVE 134 Y D S+ +N WL + ++P I+GTL GRL V YVE Sbjct: 3 YEFDFSFLNEYWPDLLNGVWLTLGMTVASVLPGFILGTLCAVGRLYGPPYVQRAVVFYVE 62 Query: 135 VFRNIPPLVVIFFLY 149 RN P ++ +F+L+ Sbjct: 63 AIRNTPLIIQVFWLF 77 >gi|328462992|gb|EGF34795.1| amino acid ABC transporter permease [Lactobacillus rhamnosus MTCC 5462] Length = 136 Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 30/76 (39%), Positives = 49/76 (64%) Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 AA+ AEI R G A+ GQ EA+ L +T +A R V++PQ ++ ++P + ++ +NL+K+ Sbjct: 4 AAYFAEIFRGGFGAIDEGQFEASTVLNMTRWQALRFVVIPQVVKIVLPSIGNEVINLVKD 63 Query: 338 SSLAVAVGFADLVSVG 353 SSL +G DL+ G Sbjct: 64 SSLVYVIGLGDLLRAG 79 >gi|242240716|ref|YP_002988897.1| polar amino acid ABC transporter inner membrane subunit [Dickeya dadantii Ech703] gi|242132773|gb|ACS87075.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya dadantii Ech703] Length = 502 Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 57/210 (27%), Positives = 106/210 (50%), Gaps = 10/210 (4%) Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247 ++ V ++ GIVL L L + + L +YI +L LP LVL+ + L Sbjct: 26 QLSVLTWCAGIVLGLLVA-LGKQSRLSGVRRLASVYI--WLFRSLPLLVLLIFIFNL--- 79 Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307 P + F G P F + IAL A+IAEI R GL++V +GQ EA ALGL Sbjct: 80 -PQI--FPLTAGLLSDP-FSAGLIALIVSETAYIAEIHRGGLLSVQKGQFEAGRALGLRA 135 Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367 + +++PQA+R +P L ++++ ++K +SL + ++++ VG + + + +E + Sbjct: 136 AQIRFYIVIPQALRISLPTLVNEFITIVKLTSLVSVISLSEILMVGQRLYTENFKVLETL 195 Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 L Y+ + + + L ++ ++++ Sbjct: 196 LAVACYYVLIVTLFERLIGWLEKRMDVQQR 225 >gi|190894701|ref|YP_001984994.1| putative amino acid ABC transporter permease [Rhizobium etli CIAT 652] gi|190700362|gb|ACE94444.1| probable amino acid ABC transporter, permease protein [Rhizobium etli CIAT 652] Length = 219 Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 53/169 (31%), Positives = 85/169 (50%), Gaps = 11/169 (6%) Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285 T +I G P LVL+ Y + V G + P F + +AL+ + ++ + EIV Sbjct: 60 TDIIRGTPVLVLVLASY--YVSAAV--------GLDLGP-FSAGVLALAVFCSSHVGEIV 108 Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345 R L A+P+GQ EAA A+GLT + VL PQAMR +P + ++K S+L VG Sbjct: 109 RGALQAIPKGQTEAAKAIGLTFTQTFTSVLWPQAMRQCLPAWVNTAAEMVKASTLLSVVG 168 Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394 A+L+ II++ +++ + +Y ++ I F + K AL Sbjct: 169 VAELLLRTQEIISRNFMSLQFYFLAGGLYFIVNYGIEHFGKYVERKTAL 217 >gi|325696133|gb|EGD38024.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK160] Length = 219 Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 37/127 (29%), Positives = 76/127 (59%), Gaps = 4/127 (3%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I+ + +T+A +AEI+R GL A+ GQ EA ++ G T + R ++LPQA+R ++P + SQ Sbjct: 89 ISFTVFTSAALAEIIRGGLNAIDPGQTEAGLSQGFTQFQILRYIILPQAIRKMLPAIISQ 148 Query: 331 YLNLLKNSSLAVAV-GFADLVSVGGTIINQTGQAIEIILIWMF---IYLSLSIMIALFMN 386 ++ ++K++SL +V +L ++ + +A ++ +++ IY ++ I+ F Sbjct: 149 FVTVIKDTSLLYSVIALQELFGSAQILMGRYFEAEQVFALYLLVAAIYFLINFAISSFSR 208 Query: 387 RLNAKIA 393 +L+ + A Sbjct: 209 KLSQRWA 215 Score = 41.2 bits (95), Expect = 0.26, Method: Compositional matrix adjust. Identities = 22/61 (36%), Positives = 36/61 (59%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 IL G T ++F ++ +TI GT++ R NKL+ I +Y+E RN+P L+ IF + Sbjct: 16 ILKGLWLTLQISFISIVLSTIFGTILAVMRNGKNKLLKLIASIYIEFVRNVPNLLWIFTI 75 Query: 149 Y 149 + Sbjct: 76 F 76 >gi|325690798|gb|EGD32799.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK115] gi|327463112|gb|EGF09433.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK1] Length = 219 Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 37/127 (29%), Positives = 76/127 (59%), Gaps = 4/127 (3%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I+ + +T+A +AEI+R GL A+ GQ EA ++ G T + R ++LPQA+R ++P + SQ Sbjct: 89 ISFTVFTSAALAEIIRGGLNAIDPGQTEAGLSQGFTQFQILRYIILPQAIRKMLPAIISQ 148 Query: 331 YLNLLKNSSLAVAV-GFADLVSVGGTIINQTGQAIEIILIWMF---IYLSLSIMIALFMN 386 ++ ++K++SL +V +L ++ + +A ++ +++ IY ++ I+ F Sbjct: 149 FVTVIKDTSLLYSVIALQELFGSAQILMGRYFEAEQVFALYLLVAAIYFLINFAISSFSR 208 Query: 387 RLNAKIA 393 +L+ + A Sbjct: 209 KLSQRWA 215 Score = 40.8 bits (94), Expect = 0.39, Method: Compositional matrix adjust. Identities = 21/61 (34%), Positives = 36/61 (59%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 IL G T ++F ++ +T+ GT++ R NKL+ I +Y+E RN+P L+ IF + Sbjct: 16 ILKGLWLTLQISFISIVLSTVFGTILAVMRNGKNKLLKLIASIYIEFVRNVPNLLWIFTI 75 Query: 149 Y 149 + Sbjct: 76 F 76 >gi|325267600|ref|ZP_08134252.1| arginine ABC superfamily ATP binding cassette transporter, membrane protein [Kingella denitrificans ATCC 33394] gi|324980950|gb|EGC16610.1| arginine ABC superfamily ATP binding cassette transporter, membrane protein [Kingella denitrificans ATCC 33394] Length = 219 Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 63/219 (28%), Positives = 102/219 (46%), Gaps = 32/219 (14%) Query: 181 LTMDTNAKIFVFSFVLGIVLSLFAT-------RLSRHFHEKTGKALPLLYISTFLIFGLP 233 LT++ A V S +G+ ++ RLSR + E + + PLL FL +GLP Sbjct: 19 LTLELAAYGIVLSLAVGLAAAVCMAYRLPVLDRLSRGYVELS-RNTPLLIQLFFLYYGLP 77 Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293 K + D F IAL ++AE +R+GL+AVP Sbjct: 78 -------KIGIKIDG-----------------FTCGVIALVFLGGGYMAEALRAGLLAVP 113 Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353 +GQ EAA A+GL + + R V+LPQA +P + + L L+K +S+ AV A+L+ V Sbjct: 114 KGQTEAAKAIGLGNVQIFRYVVLPQAWAVSLPAIAANVLFLIKETSVIGAVSVAELMFVT 173 Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 II + E + + YL + + ++++ K+ Sbjct: 174 KDIIGMDYKTNEALFLLFVSYLIILLPVSVWARYAERKV 212 >gi|153010172|ref|YP_001371386.1| polar amino acid ABC transporter, inner membrane subunit [Ochrobactrum anthropi ATCC 49188] gi|151562060|gb|ABS15557.1| polar amino acid ABC transporter, inner membrane subunit [Ochrobactrum anthropi ATCC 49188] Length = 215 Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 60/210 (28%), Positives = 100/210 (47%), Gaps = 18/210 (8%) Query: 188 KIFVFSFVLGIVLS--LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH 245 +I + +LG ++ L A RLSR + L Y+S F G P LV + + L+ Sbjct: 22 QISALALILGFAVAAILVAGRLSRS---PILRGLAAAYVSVFR--GTPCLVQL---FILY 73 Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305 F P +G + P F + I L A+++E +R + +V RGQ EAA ++G Sbjct: 74 FGGPQIG-------INLEP-FAAGVIGLGLNIGAYMSESIRGAIQSVDRGQSEAARSIGF 125 Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365 + R V+LPQA R +I PL + LLK S+L + +L I T + E Sbjct: 126 GRGQTMRFVVLPQAARLMIRPLGVNAIALLKGSALVSTISVVELTYTAQRFIGSTYKPFE 185 Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIALK 395 I + +Y+ + ++A ++ L+ + A + Sbjct: 186 IFGVAAVLYMIIIYIVARGVDLLDKRFAAQ 215 >gi|134295678|ref|YP_001119413.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia vietnamiensis G4] gi|134138835|gb|ABO54578.1| amino acid ABC transporter membrane protein 2, PAAT family [Burkholderia vietnamiensis G4] Length = 241 Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 45/128 (35%), Positives = 71/128 (55%), Gaps = 10/128 (7%) Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291 +P L+LI Y F P+L + G +TV AL+ A++A V +G++A Sbjct: 72 IPVLMLIFWTY---FLMPMLLHMDVPGLATV-------VCALALIGGAYLAHAVHAGIVA 121 Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 GQ +A ++LGLT + R VLLPQA+R + P +Q++ L+K++SLA VG +L Sbjct: 122 AGEGQRQAGLSLGLTRWQTVRHVLLPQAIRIMTPSFVNQWVALVKDTSLAYIVGVPELSF 181 Query: 352 VGGTIINQ 359 V + N+ Sbjct: 182 VATQVNNR 189 >gi|167738654|ref|ZP_02411428.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Burkholderia pseudomallei 14] Length = 176 Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 47/143 (32%), Positives = 74/143 (51%), Gaps = 23/143 (16%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 +A+P+L + + F LP L LH D P L ++ ALS Sbjct: 15 RAIPVLMLIFWTYFLLPVL--------LHADVPGLA---------------AVVCALSLV 51 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 A++A V +G+ A GQ +A ++LGLT + R VLLPQA+R + P +Q+++L+K Sbjct: 52 GGAYLAHSVHAGIRAAGAGQWQAGLSLGLTRWQTVRHVLLPQAVRIMTPSFVNQWVSLVK 111 Query: 337 NSSLAVAVGFADLVSVGGTIINQ 359 ++SLA VG +L V + N+ Sbjct: 112 DTSLAYIVGVPELSFVATQVNNR 134 >gi|163795107|ref|ZP_02189075.1| polar amino acid uptake family ABC transporter, permease protein [alpha proteobacterium BAL199] gi|159179505|gb|EDP64034.1| polar amino acid uptake family ABC transporter, permease protein [alpha proteobacterium BAL199] Length = 300 Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 38/140 (27%), Positives = 75/140 (53%), Gaps = 10/140 (7%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P+++ L+ A ++E+VR + ++P GQ E+A +L R+ +++LPQ ++ + Sbjct: 164 PDWVKATFGLALPVMANVSELVRGAIQSIPSGQWESAESLAFNRRQTLWMIILPQCVKRM 223 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI-------ILIWMFIYLS 376 +PP + Y L + LA VG ++++++ G +++ G ++ IL+W F+Y Sbjct: 224 LPPWMNLYAILTMATVLASVVGVSEVMTLTGRVLSAEGGRTDLLVPFYSYILLWFFLY-- 281 Query: 377 LSIMIALFMNRLNAKIALKE 396 IAL RL + A+K Sbjct: 282 -CYPIALLTVRLERRFAVKS 300 >gi|134278590|ref|ZP_01765304.1| amino acid ABC transporter, permease/ATP-binding protein [Burkholderia pseudomallei 305] gi|134250374|gb|EBA50454.1| amino acid ABC transporter, permease/ATP-binding protein [Burkholderia pseudomallei 305] Length = 636 Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 47/141 (33%), Positives = 81/141 (57%), Gaps = 6/141 (4%) Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH-RKATRLVLLPQAM 320 +SP F + + L+ AAF AE +R G+++V +GQ+EAA ALGL R+ATR+V LPQAM Sbjct: 164 ISP-FCAAVLGLTLNHAAFAAEGIRGGILSVDQGQLEAAAALGLPRARQATRIV-LPQAM 221 Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL---IWMFIYLSL 377 R+ +P + + L K SS+ + +L I + + I +++ +W I L++ Sbjct: 222 RAFLPVAFNDLIALAKGSSMVYVLAMPELFYTVQVIYRRNLEVIPLLMVATVWYLIILTV 281 Query: 378 SIMIALFMNRLNAKIALKEKK 398 ++ + R A+ A++E + Sbjct: 282 LSIVQAQVERRYARGAVREPE 302 >gi|170695841|ref|ZP_02886982.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia graminis C4D1M] gi|170139265|gb|EDT07452.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia graminis C4D1M] Length = 216 Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 44/125 (35%), Positives = 70/125 (56%), Gaps = 1/125 (0%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G VSP ++ A+S +A++IAEI+R G +++P G +EAA LGL+ R +L+PQ Sbjct: 81 GINVSP-LVAAISAVSLCSASYIAEILRGGFLSIPPGHIEAARMLGLSPFDTLRRILVPQ 139 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378 A R +P L ++ + L+K SSL VG A+L + T + +E + IY + Sbjct: 140 AFRLTLPSLVNEMVLLIKASSLISVVGVAELTRTAQNLAASTYRPLEAYVAAGLIYFVIC 199 Query: 379 IMIAL 383 +AL Sbjct: 200 GALAL 204 >gi|76817435|ref|YP_335895.1| amino acid ABC transporter ATP-binding/permease [Burkholderia pseudomallei 1710b] gi|254262714|ref|ZP_04953579.1| amino acid ABC transporter, ATP-binding/permease protein [Burkholderia pseudomallei 1710a] gi|254301318|ref|ZP_04968762.1| amino acid ABC transporter, permease/ATP-binding protein, His/Glu/Gln/Arg/opine family [Burkholderia pseudomallei 406e] gi|76581908|gb|ABA51382.1| amino acid ABC transporter, ATP-binding/permease protein [Burkholderia pseudomallei 1710b] gi|157811491|gb|EDO88661.1| amino acid ABC transporter, permease/ATP-binding protein, His/Glu/Gln/Arg/opine family [Burkholderia pseudomallei 406e] gi|254213716|gb|EET03101.1| amino acid ABC transporter, ATP-binding/permease protein [Burkholderia pseudomallei 1710a] Length = 636 Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 47/141 (33%), Positives = 81/141 (57%), Gaps = 6/141 (4%) Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH-RKATRLVLLPQAM 320 +SP F + + L+ AAF AE +R G+++V +GQ+EAA ALGL R+ATR+V LPQAM Sbjct: 164 ISP-FCAAVLGLTLNHAAFAAEGIRGGILSVDQGQLEAAAALGLPRARQATRIV-LPQAM 221 Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL---IWMFIYLSL 377 R+ +P + + L K SS+ + +L I + + I +++ +W I L++ Sbjct: 222 RAFLPVAFNDLIALAKGSSMVYVLAMPELFYTVQVIYRRNLEVIPLLMVATVWYLIILTV 281 Query: 378 SIMIALFMNRLNAKIALKEKK 398 ++ + R A+ A++E + Sbjct: 282 LSIVQAQVERRYARGAVREPE 302 >gi|324993848|gb|EGC25767.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK405] gi|324994831|gb|EGC26744.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK678] gi|325687272|gb|EGD29294.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK72] Length = 219 Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 37/127 (29%), Positives = 76/127 (59%), Gaps = 4/127 (3%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I+ + +T+A +AEI+R GL A+ GQ EA ++ G T + R ++LPQA+R ++P + SQ Sbjct: 89 ISFTVFTSAALAEIIRGGLNAIDPGQTEAGLSQGFTQFQILRYIILPQAIRKMLPAIISQ 148 Query: 331 YLNLLKNSSLAVAV-GFADLVSVGGTIINQTGQAIEIILIWMF---IYLSLSIMIALFMN 386 ++ ++K++SL +V +L ++ + +A ++ +++ IY ++ I+ F Sbjct: 149 FVTVIKDTSLLYSVIALQELFGSAQILMGRYFEAEQVFALYLLVAAIYFLINFAISSFSR 208 Query: 387 RLNAKIA 393 +L+ + A Sbjct: 209 KLSQRWA 215 Score = 41.2 bits (95), Expect = 0.26, Method: Compositional matrix adjust. Identities = 22/61 (36%), Positives = 36/61 (59%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 IL G T ++F ++ +TI GT++ R NKL+ I +Y+E RN+P L+ IF + Sbjct: 16 ILKGLWLTLQISFISIVLSTIFGTILAVMRNGKNKLLKLIASIYIEFVRNVPNLLWIFTI 75 Query: 149 Y 149 + Sbjct: 76 F 76 >gi|240145778|ref|ZP_04744379.1| L-cystine ABC transporter, permease protein [Roseburia intestinalis L1-82] gi|257202110|gb|EEV00395.1| L-cystine ABC transporter, permease protein [Roseburia intestinalis L1-82] Length = 230 Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 49/177 (27%), Positives = 93/177 (52%), Gaps = 12/177 (6%) Query: 227 FLIFGLPTLVLIALKYQLHF-DKPVLGQFNFIGGSTVSP----EFMSLYIALSCYTAAFI 281 F+I +P L IA Y F P+L Q + +P ++++ ALS A+ Sbjct: 56 FIINKIPVLKQIAGIYIWVFRGTPLLVQLFIMYWGICNPLGINKWVACISALSLNVGAYS 115 Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341 AE +R+ ++++ +GQ EA +LG+++++ R +++PQA IPPL + ++ L+K++SLA Sbjct: 116 AETIRAAILSINKGQWEAGYSLGMSYQQTFRRIIIPQAATVSIPPLFNTFIGLVKDTSLA 175 Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 + G + + +A L +++IY+ ++++ LF L EKK Sbjct: 176 STIMI-------GEMFRKAQEAAASSLEYLWIYIEVALIYLLFCTLLTGLQKWIEKK 225 >gi|225420154|ref|ZP_03762457.1| hypothetical protein CLOSTASPAR_06497 [Clostridium asparagiforme DSM 15981] gi|225041211|gb|EEG51457.1| hypothetical protein CLOSTASPAR_06497 [Clostridium asparagiforme DSM 15981] Length = 219 Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 37/115 (32%), Positives = 68/115 (59%), Gaps = 1/115 (0%) Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 AA+ AEI RSG+ ++P+GQ EAA LG + + ++LPQ ++ I+P +T++ + L+K+ Sbjct: 102 AAYFAEIYRSGIQSMPQGQYEAAKILGYSRGQTFFKIILPQVIKRILPSVTNEVITLVKD 161 Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 +SLA + ++ S+ + I I +F Y+ ++++AL M L K+ Sbjct: 162 TSLAFTLSVMEMFSIAKMLAASQSNMIPFIAAGLFYYV-FNLIVALAMEGLEKKL 215 >gi|242311107|ref|ZP_04810124.1| amino acid ABC transporter, permease/ATP-binding protein, His/Glu/Gln/Arg/opine family [Burkholderia pseudomallei 1106b] gi|242134346|gb|EES20749.1| amino acid ABC transporter, permease/ATP-binding protein, His/Glu/Gln/Arg/opine family [Burkholderia pseudomallei 1106b] Length = 636 Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 47/141 (33%), Positives = 81/141 (57%), Gaps = 6/141 (4%) Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH-RKATRLVLLPQAM 320 +SP F + + L+ AAF AE +R G+++V +GQ+EAA ALGL R+ATR+V LPQAM Sbjct: 164 ISP-FCAAVLGLTLNHAAFAAEGIRGGILSVDQGQLEAAAALGLPRARQATRIV-LPQAM 221 Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL---IWMFIYLSL 377 R+ +P + + L K SS+ + +L I + + I +++ +W I L++ Sbjct: 222 RAFLPVAFNDLIALAKGSSMVYVLAMPELFYTVQVIYRRNLEVIPLLMVATVWYLIILTV 281 Query: 378 SIMIALFMNRLNAKIALKEKK 398 ++ + R A+ A++E + Sbjct: 282 LSIVQAQVERRYARGAVREPE 302 >gi|307243525|ref|ZP_07525673.1| ABC transporter, permease protein [Peptostreptococcus stomatis DSM 17678] gi|306493081|gb|EFM65086.1| ABC transporter, permease protein [Peptostreptococcus stomatis DSM 17678] Length = 205 Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 52/172 (30%), Positives = 87/172 (50%), Gaps = 16/172 (9%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 +FS LGIV++ RLS + K ++ YI +++ G P L+ Q+ F V Sbjct: 17 IFSIPLGIVVAF--VRLS---NNKIASSVSSFYI--WIMRGSPLLL------QMMFFYYV 63 Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 L I V + +IA AA+ AEI R GL+++ +GQ EAA LG Sbjct: 64 LP---IISPKLVFDQLTVAFIAFVINYAAYYAEIFRGGLLSIDKGQFEAAKVLGFDKITM 120 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362 + ++LPQ + ++PP++++ + L+K++SL +G DL+ V N+ Sbjct: 121 YKRIILPQLTKRVLPPVSNELITLVKDTSLVYILGLNDLLRVATAASNREAS 172 >gi|239931079|ref|ZP_04688032.1| amino acid ABC transporter transmembrane protein [Streptomyces ghanaensis ATCC 14672] gi|291439449|ref|ZP_06578839.1| amino acid ABC transporter permease protein [Streptomyces ghanaensis ATCC 14672] gi|291342344|gb|EFE69300.1| amino acid ABC transporter permease protein [Streptomyces ghanaensis ATCC 14672] Length = 238 Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 41/122 (33%), Positives = 63/122 (51%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +AL A+ +EIVR L AV Q E IAL T + RL+LLPQA+ +IPP ++ Sbjct: 88 LALGLTYGAYGSEIVRGALAAVDPAQREGGIALSFTPWQRMRLILLPQAVPEMIPPFSNL 147 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 + LLK ++L +G DL G + ++ EI + IY ++ ++ M L Sbjct: 148 LVELLKGTALVSIMGMGDLAFSGNLVRLALQESAEIYTYILLIYFVIAFLLTRLMRGLEK 207 Query: 391 KI 392 K+ Sbjct: 208 KL 209 >gi|194016486|ref|ZP_03055100.1| L-cystine transport system permease protein TcyL [Bacillus pumilus ATCC 7061] gi|194011959|gb|EDW21527.1| L-cystine transport system permease protein TcyL [Bacillus pumilus ATCC 7061] Length = 253 Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 41/113 (36%), Positives = 65/113 (57%) Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328 LYI TAA+ +EI RS L +VP Q EAA ++GLT + R L+PQA + +P + Sbjct: 100 LYITYGLNTAAYFSEIFRSALSSVPASQYEAAASIGLTKWQIYRRTLIPQAGKIALPNIG 159 Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 +NLL+N+SLA +G D++ T+ + +E I I++ LS+++ Sbjct: 160 VAIVNLLQNTSLAFTLGVMDIIGKVQTLGALYYRVLEGYFIAAVIFIMLSLLL 212 >gi|251799197|ref|YP_003013928.1| polar amino acid ABC transporter inner membrane protein [Paenibacillus sp. JDR-2] gi|247546823|gb|ACT03842.1| polar amino acid ABC transporter, inner membrane subunit [Paenibacillus sp. JDR-2] Length = 262 Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 36/108 (33%), Positives = 66/108 (61%) Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 A+++E +R+ ++AV RGQ+EAA A+G+T +A ++LPQA+ +P T+ + +LK+ Sbjct: 109 GAYVSETIRAAVLAVNRGQVEAAYAVGMTGYQAFTRIVLPQAVGIAVPVFTNLVIAMLKD 168 Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 +SLA +G ++ T+ + + IE + IYL +SI++ M Sbjct: 169 TSLAFTLGVMEMTGKAQTLGSLSQHFIETYIALALIYLVMSIVLERLM 216 >gi|330966765|gb|EGH67025.1| arginine/ornithine ABC transporter permease [Pseudomonas syringae pv. actinidiae str. M302091] Length = 232 Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 52/167 (31%), Positives = 85/167 (50%), Gaps = 11/167 (6%) Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL----YIALSCYTA 278 ++ T++I G P LV + L Y L QF+ + S P S +A + T+ Sbjct: 56 WLYTYVIRGTPMLVQLFLIYY------GLAQFSAVRESFFWPWLSSATFCACLAFAINTS 109 Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338 A+ AEI+ L A P G++EAA A+G++ K R +LLP A+R +P +++ + +L+ + Sbjct: 110 AYTAEIIAGSLKATPAGEIEAARAMGMSKAKMYRRILLPSALRRALPQYSNEVIMMLQTT 169 Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS-IMIALF 384 SLA V D+ T+ Q E + YL L+ I++ LF Sbjct: 170 SLASIVTLIDITGAARTVNAQFYLPFEAYVTAGVFYLCLTFILVRLF 216 >gi|254252391|ref|ZP_04945709.1| ABC-type amino acid transport system permease component [Burkholderia dolosa AUO158] gi|124895000|gb|EAY68880.1| ABC-type amino acid transport system permease component [Burkholderia dolosa AUO158] Length = 252 Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 44/133 (33%), Positives = 71/133 (53%), Gaps = 23/133 (17%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 +A+P+L + + F +PTL LH D P L ++ AL+ Sbjct: 81 RAIPVLMLIFWTYFLMPTL--------LHMDVPGLA---------------TVVCALALV 117 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 A++A V +G++A GQ +A ++LGLT + R VLLPQA+R + P +Q++ L+K Sbjct: 118 GGAYLAHAVHAGIVAAGAGQRQAGLSLGLTRWQTVRYVLLPQAIRIMTPSFVNQWVALVK 177 Query: 337 NSSLAVAVGFADL 349 ++SLA VG +L Sbjct: 178 DTSLAYIVGVPEL 190 >gi|291534358|emb|CBL07470.1| amino acid ABC transporter membrane protein, PAAT family (TC 3.A.1.3.-) [Roseburia intestinalis M50/1] Length = 230 Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 49/177 (27%), Positives = 93/177 (52%), Gaps = 12/177 (6%) Query: 227 FLIFGLPTLVLIALKYQLHF-DKPVLGQFNFIGGSTVSP----EFMSLYIALSCYTAAFI 281 F+I +P L IA Y F P+L Q + +P ++++ ALS A+ Sbjct: 56 FIINKIPVLKQIAGIYIWVFRGTPLLVQLFIMYWGICNPLGINKWVACISALSLNVGAYS 115 Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341 AE +R+ ++++ +GQ EA +LG+++++ R +++PQA IPPL + ++ L+K++SLA Sbjct: 116 AETIRAAILSINKGQWEAGYSLGMSYQQTFRRIIIPQAATVSIPPLFNTFIGLVKDTSLA 175 Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 + G + + +A L +++IY+ ++++ LF L EKK Sbjct: 176 STIMI-------GEMFRKAQEAAASSLEYLWIYIEVALIYLLFCTLLTGLQKWIEKK 225 >gi|186475920|ref|YP_001857390.1| glutamine ABC transporter permease [Burkholderia phymatum STM815] gi|184192379|gb|ACC70344.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia phymatum STM815] Length = 218 Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 37/101 (36%), Positives = 59/101 (58%) Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 + A+IAEIVR ++VPRG EA +ALG+ + V+ P A+R + P L +Q++ LK Sbjct: 100 SGAYIAEIVRGAFLSVPRGLKEAGLALGMPMWRVLAFVIGPVAIRRMTPSLGNQFIVSLK 159 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377 ++SL + +G +L G I+ +A+EI IYL + Sbjct: 160 DTSLFIVIGVGELTRQGQEIMASNFRAVEIWTAVAAIYLCM 200 >gi|126444102|ref|YP_001063396.1| amino acid ABC transporter permease/ATP-binding protein [Burkholderia pseudomallei 668] gi|126223593|gb|ABN87098.1| amino acid ABC transporter, permease/ATP-binding protein [Burkholderia pseudomallei 668] Length = 636 Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 47/141 (33%), Positives = 81/141 (57%), Gaps = 6/141 (4%) Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH-RKATRLVLLPQAM 320 +SP F + + L+ AAF AE +R G+++V +GQ+EAA ALGL R+ATR+V LPQAM Sbjct: 164 ISP-FCAAVLGLTLNHAAFAAEGIRGGILSVDQGQLEAAAALGLPRARQATRIV-LPQAM 221 Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL---IWMFIYLSL 377 R+ +P + + L K SS+ + +L I + + I +++ +W I L++ Sbjct: 222 RAFLPVAFNDLIALAKGSSMVYVLAMPELFYTVQVIYRRNLEVIPLLMVATVWYLIILTV 281 Query: 378 SIMIALFMNRLNAKIALKEKK 398 ++ + R A+ A++E + Sbjct: 282 LSIVQAQVERRYARGAVREPE 302 >gi|307316662|ref|ZP_07596105.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD [Sinorhizobium meliloti AK83] gi|306897860|gb|EFN28603.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD [Sinorhizobium meliloti AK83] Length = 221 Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 41/135 (30%), Positives = 73/135 (54%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P ++ I L + + AE+ R+G+ VPRGQ EAA A LT R+ V+LPQA+ + Sbjct: 86 PALVAGVIGLGIHYGTYAAEVYRAGIENVPRGQWEAAKATNLTARQTWIHVILPQAIPPM 145 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 IP L + + + K + L A+ +L++ +I N + IE + + +L +S++ Sbjct: 146 IPALANYLIAMFKETPLLSAITVLELMNQAKSIANSNYRYIEPMTLVGVFFLIISLISVF 205 Query: 384 FMNRLNAKIALKEKK 398 F+ L A+ + E++ Sbjct: 206 FLRWLEARYSRVEER 220 >gi|296160744|ref|ZP_06843558.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. Ch1-1] gi|295889047|gb|EFG68851.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. Ch1-1] Length = 240 Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 55/199 (27%), Positives = 98/199 (49%), Gaps = 12/199 (6%) Query: 204 ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL----GQFNFIGG 259 A +LSR +T + + +Y + F G+P L++I Y +F L GQ+ G Sbjct: 45 AAKLSRL---RTLRVIGDIYTTVFR--GVPELLVI---YLFYFGGSTLVTTVGQWFGAEG 96 Query: 260 STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319 P F+ +A+ + A+ AE+ RS ++AV RG++EAA A+G+ R +L+PQ Sbjct: 97 FVGVPPFVIGALAVGMISGAYQAEVYRSAVLAVSRGELEAARAIGMPTLTMARRILIPQV 156 Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379 +R +P + + + LK+S+L G A+L+ T Q ++ +YL ++ Sbjct: 157 LRFALPGIGNVWQLSLKDSALISVTGLAELLRTSQVAAGSTHQYFTFFVVGGALYLLMTS 216 Query: 380 MIALFMNRLNAKIALKEKK 398 + NR A++ K+ Sbjct: 217 ISNRVFNRAEARVGRSFKR 235 >gi|15889179|ref|NP_354860.1| ABC transporter, membrane spanning protein (amino acid) [Agrobacterium tumefaciens str. C58] gi|15156998|gb|AAK87645.1| ABC transporter, membrane spanning protein (amino acid) [Agrobacterium tumefaciens str. C58] Length = 267 Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 54/195 (27%), Positives = 104/195 (53%), Gaps = 10/195 (5%) Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY---QLHFDKPVLGQFNFIGG 259 F L+ EK+ + +Y + F GLP L+ + + Y Q+ + V G F G Sbjct: 72 FLIALAAQSEEKSLRLAAGIYTTIFR--GLPELLTLFIVYYGVQMLL-QSVAGYVGFSGP 128 Query: 260 STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319 ++ F++ +ALS +++ +E++ S A+P+GQ EA ALGL+ + L+++PQ Sbjct: 129 VEINA-FVAGMLALSVVFSSYASEVLLSAFKAIPKGQYEAGDALGLSRSRTMVLIIIPQL 187 Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379 +R +P +T+ ++ LLK++S +G AD++ G + +A I +YL L++ Sbjct: 188 VRIALPGMTNLWVILLKDTSYVSIIGLADIIRQTGIAARVSKEAFFFYGIACLLYLILAL 247 Query: 380 MIAL---FMNRLNAK 391 + ++ F++R + K Sbjct: 248 ISSVGIGFIDRWSRK 262 >gi|260102961|ref|ZP_05753198.1| glutamine ABC superfamily ATP binding cassette transporter, permease protein [Lactobacillus helveticus DSM 20075] gi|260083246|gb|EEW67366.1| glutamine ABC superfamily ATP binding cassette transporter, permease protein [Lactobacillus helveticus DSM 20075] Length = 215 Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 37/132 (28%), Positives = 72/132 (54%), Gaps = 1/132 (0%) Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321 V P + + +A AA+ AEI R G ++ GQ EAA L L+ + +++PQ ++ Sbjct: 82 VFPRYQAALLAFVLNYAAYFAEIFRGGFQSIDEGQFEAAKVLRLSRWQTMTKIVIPQVIK 141 Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 ++P + ++ +NL+K+SSL +G DL+ G + + + ++L+ + IYL L + Sbjct: 142 IVLPSIGNEVINLVKDSSLVYVIGLGDLLRAGNVAMARDVTLVPLVLVGV-IYLLLISIC 200 Query: 382 ALFMNRLNAKIA 393 A + +L ++ Sbjct: 201 AFVLKKLEKHVS 212 >gi|308234441|ref|ZP_07665178.1| amino acid ABC transporter permease protein [Atopobium vaginae DSM 15829] gi|328944287|ref|ZP_08241751.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Atopobium vaginae DSM 15829] gi|327491206|gb|EGF22981.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Atopobium vaginae DSM 15829] Length = 585 Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 58/206 (28%), Positives = 110/206 (53%), Gaps = 20/206 (9%) Query: 194 FVLGIVLSLFAT-RLSRHFH-----EKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247 F++G++++++ T ++S+H K+ L +YI F G P +V L + + Sbjct: 381 FLIGLLIAIYQTIQVSKHHRIRYMLYKSVAVLIRIYIEVFR--GTPMMVQAML---IFYG 435 Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307 +L FN +SP S + +S + A+++E VR G++ V +GQ+E A ALGL H Sbjct: 436 SKLL--FNL----DLSP-LTSAFFIVSVNSGAYLSETVRGGILGVSKGQLEGAHALGLNH 488 Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNL-LKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 ++LPQA+ SI+P + ++ LN+ +K++S+ + ++L + +I T Q + Sbjct: 489 WDTMVHIILPQAVISILPSVGNE-LNMNIKDTSVLNVIAVSELFFITKSIAGTTYQTFQT 547 Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKI 392 LI IY +L+ + +L + + I Sbjct: 548 YLIASVIYFALTFLASLGLKYVEKHI 573 >gi|239820275|ref|YP_002947460.1| polar amino acid ABC transporter, inner membrane subunit [Variovorax paradoxus S110] gi|239805128|gb|ACS22194.1| polar amino acid ABC transporter, inner membrane subunit [Variovorax paradoxus S110] Length = 241 Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 65/223 (29%), Positives = 102/223 (45%), Gaps = 18/223 (8%) Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226 FG N LS T+ V+G L+L RLSRH A YI Sbjct: 11 FGYLFNPYILSGAFTTLWLTLAAIAGGLVVGCALAL--ARLSRH---DWLAAPAHFYIWV 65 Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286 F G P LV + + Y P LG + S V + L + AA++AE+VR Sbjct: 66 FR--GTPLLVQLIIIYT---GLPQLG----LKLSVVESALLGLILN----EAAYLAEVVR 112 Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346 G+ +VP GQ AA A+G + ++ R +++PQAMR IIP L + LLK +S+ + Sbjct: 113 GGIQSVPAGQTNAARAVGFSSAQSMRYIVMPQAMRLIIPTLGNSINGLLKTTSITSVISM 172 Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 +L+ +I + +E+ ++ YL ++ + + R+ Sbjct: 173 EELLRRTQVLIQEKFMVLELFIVAAIYYLLMTTVWDVIQRRIE 215 >gi|148543750|ref|YP_001271120.1| polar amino acid ABC transporter, inner membrane subunit [Lactobacillus reuteri DSM 20016] gi|184153156|ref|YP_001841497.1| glutamine ABC transporter permease component [Lactobacillus reuteri JCM 1112] gi|194468312|ref|ZP_03074298.1| polar amino acid ABC transporter, inner membrane subunit [Lactobacillus reuteri 100-23] gi|227363270|ref|ZP_03847402.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus reuteri MM2-3] gi|325682122|ref|ZP_08161640.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus reuteri MM4-1A] gi|148530784|gb|ABQ82783.1| amino acid ABC transporter membrane protein, PAAT family [Lactobacillus reuteri DSM 20016] gi|183224500|dbj|BAG25017.1| glutamine ABC transporter permease component [Lactobacillus reuteri JCM 1112] gi|194453165|gb|EDX42063.1| polar amino acid ABC transporter, inner membrane subunit [Lactobacillus reuteri 100-23] gi|227071726|gb|EEI10017.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus reuteri MM2-3] gi|324978766|gb|EGC15715.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus reuteri MM4-1A] Length = 215 Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 36/112 (32%), Positives = 67/112 (59%), Gaps = 1/112 (0%) Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 AA+ AEI R G +V +GQ EAA L L++ + R +++PQ ++ +IP + ++ +NL+K+ Sbjct: 98 AAYFAEIFRGGFQSVDQGQFEAARVLRLSYWQTLRKIIIPQVIKIVIPSIGNEVINLVKD 157 Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 SSL +G DL+ G ++ + ++L+ + IYL L + L + ++ Sbjct: 158 SSLVYVIGLGDLLRAGNVATSRDVTLVPLMLVGL-IYLILVGICTLILRQVE 208 >gi|87309628|ref|ZP_01091762.1| putative inner membrane component of binding-protein-dependent transport system [Blastopirellula marina DSM 3645] gi|87287392|gb|EAQ79292.1| putative inner membrane component of binding-protein-dependent transport system [Blastopirellula marina DSM 3645] Length = 211 Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 59/200 (29%), Positives = 99/200 (49%), Gaps = 13/200 (6%) Query: 198 IVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFI 257 +V SL A L R + + +Y+ TF G +VL+ Y +F P I Sbjct: 20 LVSSLLAG-LGRDSRDPIVRWTATIYVETF--RGASAIVLL---YWFYFAMP-----GLI 68 Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317 G S P ++ + L A+ AE+VR+ + +VP GQ AA AL LT + R ++LP Sbjct: 69 GVSM--PAMVAGIVILGLNIGAYGAEVVRAAIHSVPVGQRIAAQALNLTPWQTMRYIVLP 126 Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377 QA + PPL + + LLK+++L + DL +G + +T +++ I + + IY L Sbjct: 127 QAALAATPPLGNLMIELLKSTALVSMITVVDLTQMGMFLRTETHRSLAIFSMLLLIYFVL 186 Query: 378 SIMIALFMNRLNAKIALKEK 397 S IA + ++ ++A + Sbjct: 187 SQCIAAAVRQIEHRLARGQD 206 Score = 37.4 bits (85), Expect = 4.4, Method: Compositional matrix adjust. Identities = 19/61 (31%), Positives = 31/61 (50%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G T + G+ A + L G GR S + +V W +YVE FR +V++++ Sbjct: 1 MLQGLWVTILITLGGIAVALVSSLLAGLGRDSRDPIVRWTATIYVETFRGASAIVLLYWF 60 Query: 149 Y 149 Y Sbjct: 61 Y 61 >gi|327474723|gb|EGF20128.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK408] gi|327490280|gb|EGF22068.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK1058] gi|328946747|gb|EGG40885.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK1087] Length = 219 Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 37/127 (29%), Positives = 76/127 (59%), Gaps = 4/127 (3%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I+ + +T+A +AEI+R GL A+ GQ EA ++ G T + R ++LPQA+R ++P + SQ Sbjct: 89 ISFTVFTSAALAEIIRGGLNAIDPGQTEAGLSQGFTQFQILRYIILPQAIRKMLPAIISQ 148 Query: 331 YLNLLKNSSLAVAV-GFADLVSVGGTIINQTGQAIEIILIWMF---IYLSLSIMIALFMN 386 ++ ++K++SL +V +L ++ + +A ++ +++ IY ++ I+ F Sbjct: 149 FVTVIKDTSLLYSVIALQELFGSAQILMGRYFEAEQVFALYLLVAAIYFLINFAISSFSR 208 Query: 387 RLNAKIA 393 +L+ + A Sbjct: 209 KLSQRWA 215 Score = 41.2 bits (95), Expect = 0.26, Method: Compositional matrix adjust. Identities = 22/61 (36%), Positives = 36/61 (59%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 IL G T ++F ++ +TI GT++ R NKL+ I +Y+E RN+P L+ IF + Sbjct: 16 ILKGLWLTLQISFISIVLSTIFGTILAVMRNGKNKLLKLIASIYIEFVRNVPNLLWIFTI 75 Query: 149 Y 149 + Sbjct: 76 F 76 >gi|323141718|ref|ZP_08076592.1| ABC transporter, permease protein [Phascolarctobacterium sp. YIT 12067] gi|322413793|gb|EFY04638.1| ABC transporter, permease protein [Phascolarctobacterium sp. YIT 12067] Length = 264 Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 40/131 (30%), Positives = 72/131 (54%), Gaps = 1/131 (0%) Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321 +SP F ++ +S T A++AE VR G+ +V GQ EAAIA+G+ H + R V+LPQA+R Sbjct: 103 MSPLFAG-FLVVSINTGAYMAETVRGGIESVDPGQKEAAIAIGMDHIQTMRCVILPQALR 161 Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 +++P L + + +K++S+ + +L + + EI I IY ++ Sbjct: 162 NVMPQLGNNLIINIKDTSVLNVISVTELYFASKSAAGVYYKYFEIFFITCVIYFIMTFTA 221 Query: 382 ALFMNRLNAKI 392 + + L +K+ Sbjct: 222 SRLLRWLESKM 232 >gi|53716338|ref|YP_106253.1| amino acid ABC transporter, ATP-binding/permease protein [Burkholderia mallei ATCC 23344] gi|67640783|ref|ZP_00439578.1| amino acid ABC transporter, permease/ATP-binding protein, His/Glu/Gln/Arg/opine family [Burkholderia mallei GB8 horse 4] gi|121597406|ref|YP_991279.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease/periplasmic amino acid-binding protein [Burkholderia mallei SAVP1] gi|124382596|ref|YP_001025690.1| amino acid ABC transporter, permease/ATP-binding protein [Burkholderia mallei NCTC 10229] gi|126446129|ref|YP_001077766.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease/periplasmic amino acid-binding protein [Burkholderia mallei NCTC 10247] gi|254176105|ref|ZP_04882763.1| amino acid ABC transporter, permease/ATP-binding protein, His/Glu/Gln/Arg/opine family [Burkholderia mallei ATCC 10399] gi|254201135|ref|ZP_04907500.1| amino acid ABC transporter, permease/ATP-binding protein, His/Glu/Gln/Arg/opine family [Burkholderia mallei FMH] gi|254205104|ref|ZP_04911457.1| amino acid ABC transporter, permease/ATP-binding protein, His/Glu/Gln/Arg/opine family [Burkholderia mallei JHU] gi|254359229|ref|ZP_04975501.1| amino acid ABC transporter, permease/ATP-binding protein, His/Glu/Gln/Arg/opine family [Burkholderia mallei 2002721280] gi|52422308|gb|AAU45878.1| amino acid ABC transporter, ATP-binding/permease protein [Burkholderia mallei ATCC 23344] gi|121225204|gb|ABM48735.1| amino acid ABC transporter, permease/ATP-binding protein, His/Glu/Gln/Arg/opine family [Burkholderia mallei SAVP1] gi|126238983|gb|ABO02095.1| amino acid ABC transporter, permease/ATP-binding protein, His/Glu/Gln/Arg/opine family [Burkholderia mallei NCTC 10247] gi|147748747|gb|EDK55822.1| amino acid ABC transporter, permease/ATP-binding protein, His/Glu/Gln/Arg/opine family [Burkholderia mallei FMH] gi|147754690|gb|EDK61754.1| amino acid ABC transporter, permease/ATP-binding protein, His/Glu/Gln/Arg/opine family [Burkholderia mallei JHU] gi|148028416|gb|EDK86376.1| amino acid ABC transporter, permease/ATP-binding protein, His/Glu/Gln/Arg/opine family [Burkholderia mallei 2002721280] gi|160697147|gb|EDP87117.1| amino acid ABC transporter, permease/ATP-binding protein, His/Glu/Gln/Arg/opine family [Burkholderia mallei ATCC 10399] gi|238521567|gb|EEP85018.1| amino acid ABC transporter, permease/ATP-binding protein, His/Glu/Gln/Arg/opine family [Burkholderia mallei GB8 horse 4] Length = 636 Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 47/141 (33%), Positives = 81/141 (57%), Gaps = 6/141 (4%) Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH-RKATRLVLLPQAM 320 +SP F + + L+ AAF AE +R G+++V +GQ+EAA ALGL R+ATR+V LPQAM Sbjct: 164 ISP-FCAAVLGLTLNHAAFAAEGIRGGILSVDQGQLEAAAALGLPRARQATRIV-LPQAM 221 Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL---IWMFIYLSL 377 R+ +P + + L K SS+ + +L I + + I +++ +W I L++ Sbjct: 222 RAFLPVAFNDLIALAKGSSMVYVLAMPELFYTVQVIYRRNLEVIPLLMVATVWYLIILTV 281 Query: 378 SIMIALFMNRLNAKIALKEKK 398 ++ + R A+ A++E + Sbjct: 282 LSIVQAQVERRYARGAVREPE 302 >gi|330810056|ref|YP_004354518.1| ABC transporter, permease component [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327378164|gb|AEA69514.1| ABC transporter, permease component [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 216 Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 38/128 (29%), Positives = 73/128 (57%), Gaps = 4/128 (3%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I L Y AA+ EIVR G++AVP A+ +LGL++ + R ++LP A R P + Sbjct: 91 IVLGVYAAAYFTEIVRGGVLAVPLSTRRASRSLGLSYVQDLRFIVLPIATRVAFPGWLNL 150 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 L ++K+++L + +G +L+ TI+ + + + ++ I IY +S+++A RL A Sbjct: 151 VLGVMKDTALVMWIGIVELLRASQTIVTRIQEPLLVLCIAGLIYYVMSLVVA----RLGA 206 Query: 391 KIALKEKK 398 ++ + ++ Sbjct: 207 RLERRWQE 214 >gi|225352766|ref|ZP_03743789.1| hypothetical protein BIFPSEUDO_04396 [Bifidobacterium pseudocatenulatum DSM 20438] gi|225156373|gb|EEG69942.1| hypothetical protein BIFPSEUDO_04396 [Bifidobacterium pseudocatenulatum DSM 20438] Length = 380 Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 35/98 (35%), Positives = 63/98 (64%), Gaps = 2/98 (2%) Query: 254 FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313 F F G S SP + ++ +AL Y + +AE+VRSG+ +P GQ EA++ALGLT ++ Sbjct: 134 FAFAGMS--SPAYWAVVLALVIYNGSVVAELVRSGVGNLPNGQREASLALGLTRTQSLME 191 Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 + +PQA+ +++P +Q + +LK+++L + + DL+ Sbjct: 192 IEVPQAIYAMLPAAVTQLVVVLKDTALGSIIMYTDLLQ 229 >gi|322388046|ref|ZP_08061652.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus infantis ATCC 700779] gi|321141067|gb|EFX36566.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus infantis ATCC 700779] Length = 238 Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 48/174 (27%), Positives = 82/174 (47%), Gaps = 20/174 (11%) Query: 215 TGKALPLLYISTFLIFGLPTLVLIALKYQLHFD---------------KPVLGQFNFIGG 259 +G + L + L+F +P +L+A Q+H+ P+L Q FI Sbjct: 38 SGATMTLQVFALVLLFSIPLGILVAFCLQVHWKPLHYMIDVYIWVMRGTPLLLQLIFIYY 97 Query: 260 STVS-----PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLV 314 S + IA + AA+ AEI R G+ +P+GQ EAA L R + Sbjct: 98 VLPSIGIRLDRVPAAIIAFTLNYAAYFAEIFRGGIATIPQGQYEAAKVLKFKPIDTVRYI 157 Query: 315 LLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368 +LPQ + ++P + ++ ++L+K++SL A+G +DL+ T N+ I + L Sbjct: 158 ILPQVTKIVLPSVFNEVMSLVKDTSLVYALGISDLILASRTAANRDASLIPMFL 211 >gi|294631808|ref|ZP_06710368.1| glutamate permease [Streptomyces sp. e14] gi|292835141|gb|EFF93490.1| glutamate permease [Streptomyces sp. e14] Length = 308 Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 47/154 (30%), Positives = 85/154 (55%), Gaps = 5/154 (3%) Query: 250 VLGQFNFIGGSTVSPEFMSLY---IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306 + G F + VS + LY L Y A+ +AEIVR+G++A+P+GQ EAA A+GL Sbjct: 122 IFGNALFAQYTDVSSDDRPLYAVVTGLVLYNASVLAEIVRAGILALPKGQTEAAQAIGLR 181 Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV-GFADLVSVGGTIINQTG-QAI 364 + +LLPQA+ +++P + SQ + ++K+++L A+ F +L++ G + + G I Sbjct: 182 KTQVMTSILLPQAVTAMLPAIVSQLVVIVKDTALGGAILTFPELLASVGPMSSYYGANTI 241 Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 + IY+ L+ + F + L ++ +K Sbjct: 242 ACFTVVAVIYVVLNFALTSFASWLERRLRRGKKS 275 >gi|146280413|ref|YP_001170566.1| amino acid ABC transporter, permease protein [Pseudomonas stutzeri A1501] gi|145568618|gb|ABP77724.1| amino acid ABC transporter, permease protein [Pseudomonas stutzeri A1501] Length = 234 Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 42/123 (34%), Positives = 65/123 (52%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + L A+ AE++R + +V RGQ EA AL +T R ++LPQA+ + IPP T+ Sbjct: 103 VGLGLNIGAYGAEVLRGAIRSVHRGQHEACHALNMTPLTRMRRIILPQALLAAIPPGTNL 162 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 + LLKN+SL + +DL + T +EI + + IY L+ I M RL Sbjct: 163 LIELLKNTSLVSLITLSDLAFRARQLDQATLMTLEIFGLALVIYFVLAQTINFAMRRLEQ 222 Query: 391 KIA 393 ++A Sbjct: 223 RLA 225 >gi|58337336|ref|YP_193921.1| ABC transporter [Lactobacillus acidophilus NCFM] gi|227903960|ref|ZP_04021765.1| ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus acidophilus ATCC 4796] gi|58254653|gb|AAV42890.1| ABC transporter [Lactobacillus acidophilus NCFM] gi|227868351|gb|EEJ75772.1| ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus acidophilus ATCC 4796] Length = 224 Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 50/175 (28%), Positives = 93/175 (53%), Gaps = 17/175 (9%) Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281 LY+ F I +PT+VL+ Y +++ P N+ S +M++ +A + + AA Sbjct: 60 LYLEFFRI--VPTIVLL---YLVYYILPRTFHVNW------SATWMAV-LAFALWVAAEF 107 Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341 ++IVR L +VP+ Q E+ +ALGL++ + R VLLPQA++ +P + ++K +SL Sbjct: 108 SDIVRGALESVPKNQRESGLALGLSNIQLFRYVLLPQAIKLELPATINLATRVIKTTSLL 167 Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMF-----IYLSLSIMIALFMNRLNAK 391 + + ++++VG II Q + W++ +Y L ++ + RL A Sbjct: 168 MVINIMEVINVGQQIIEANNQKYPTGVFWIYGFIFILYFILDYPLSAWAKRLTAN 222 >gi|312171453|emb|CBX79711.1| putative ABC transport system, inner membrane component [Erwinia amylovora ATCC BAA-2158] Length = 221 Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 39/102 (38%), Positives = 60/102 (58%) Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 A+ EI+R+G+ P+GQ EAA LGLT ++ V+LP AM+ I P L SQ + ++ Sbjct: 102 GAYSTEIIRAGIRVTPKGQWEAARVLGLTRQQTFIRVVLPPAMKRIYPALVSQCIIVMLG 161 Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379 SS+ V F +L I ++T + E+ L+ +YL+LSI Sbjct: 162 SSVVSQVSFEELTFAANLIQSRTFLSFEVYLVTTLLYLALSI 203 >gi|302335554|ref|YP_003800761.1| amino acid ABC transporter membrane protein, PAAT family [Olsenella uli DSM 7084] gi|301319394|gb|ADK67881.1| amino acid ABC transporter membrane protein, PAAT family [Olsenella uli DSM 7084] Length = 217 Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 36/121 (29%), Positives = 69/121 (57%), Gaps = 6/121 (4%) Query: 256 FIGGSTVSPEFM--SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313 ++ G P +M ++ IA AA+ AEI RSG+ ++P+GQ EAA LG + + Sbjct: 75 YVFGQQTGPSYMFVAVMIAFIVNYAAYFAEIYRSGIQSMPQGQYEAAQVLGYSRSQTFFG 134 Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII----NQTGQAIEIILI 369 ++LPQ + I+P + ++ + L+K++SLA ++G A++ + ++ N A+ ++ Sbjct: 135 IILPQVFKRILPAMGNEVVTLVKDTSLAFSIGIAEMFTTSRALVASQRNMAPFALAALIY 194 Query: 370 W 370 W Sbjct: 195 W 195 >gi|241113593|ref|YP_002973428.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240861801|gb|ACS59467.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 219 Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 52/169 (30%), Positives = 85/169 (50%), Gaps = 11/169 (6%) Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285 T +I G P LVL+ Y + V G + P F + +AL+ + ++ + EIV Sbjct: 60 TDIIRGTPVLVLVLASY--YVSAAV--------GLDLGP-FSAGVLALAVFCSSHVGEIV 108 Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345 R L A+P+GQ EAA A+GLT + VL PQAMR +P + ++K S+L +G Sbjct: 109 RGALQAIPKGQTEAAKAIGLTFTQTFTSVLWPQAMRQCLPAWVNTAAEMVKASTLLSVIG 168 Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394 A+L+ II++ +++ + +Y ++ I F + K AL Sbjct: 169 VAELLLRTQEIISRNFMSLQFYFLAGGLYFIINYGIEHFGKYVERKTAL 217 >gi|220929053|ref|YP_002505962.1| polar amino acid ABC transporter inner membrane subunit [Clostridium cellulolyticum H10] gi|219999381|gb|ACL75982.1| polar amino acid ABC transporter, inner membrane subunit [Clostridium cellulolyticum H10] Length = 227 Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 56/215 (26%), Positives = 101/215 (46%), Gaps = 36/215 (16%) Query: 193 SFVLGIVLSLFATRLSRHFHEK--------TGKALPLLYISTFLIFGLPTLVLIALKYQL 244 F+LG+ L+L R+S++ + +ALPLL I + F +P L Sbjct: 39 GFILGLFLAL--GRISKNIVIRRIVTCVIEITRALPLLLIVFWFYFFIPLLA-------- 88 Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304 +P+ P +S Y++L+ Y+A AEI R GL ++ +GQ + A G Sbjct: 89 --GRPL-------------PILLSAYLSLTFYSAVNQAEIFRGGLTSIDKGQWQVASCTG 133 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364 L+H + ++LPQ +R ++P ++L K++S+ +G DL +G + + + Sbjct: 134 LSHYQCMTYIILPQVLRMMLPSFVGFLISLFKDTSVIYIIGIIDLTQIGIMLSQREPDKL 193 Query: 365 --EIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 IL+ M +Y L +++ F + +K A K Sbjct: 194 IFSYILVAM-LYFILCFILSHFAKKWESKQARWSK 227 >gi|53722691|ref|YP_111676.1| ABC transport system, ATP-binding protein [Burkholderia pseudomallei K96243] gi|52213105|emb|CAH39144.1| putative ABC transport system, ATP-binding protein [Burkholderia pseudomallei K96243] Length = 636 Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 47/141 (33%), Positives = 81/141 (57%), Gaps = 6/141 (4%) Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH-RKATRLVLLPQAM 320 +SP F + + L+ AAF AE +R G+++V +GQ+EAA ALGL R+ATR+V LPQAM Sbjct: 164 ISP-FCAAVLGLTLNHAAFAAEGIRGGILSVDQGQLEAAAALGLPRARQATRIV-LPQAM 221 Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL---IWMFIYLSL 377 R+ +P + + L K SS+ + +L I + + I +++ +W I L++ Sbjct: 222 RAFLPVAFNDLIALAKGSSMVYVLAMPELFYTVQVIYRRNLEVIPLLMVATVWYLIILTV 281 Query: 378 SIMIALFMNRLNAKIALKEKK 398 ++ + R A+ A++E + Sbjct: 282 LSIVQAQVERRYARGAVREPE 302 >gi|52425742|ref|YP_088879.1| ArtM protein [Mannheimia succiniciproducens MBEL55E] gi|52307794|gb|AAU38294.1| ArtM protein [Mannheimia succiniciproducens MBEL55E] Length = 223 Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 56/218 (25%), Positives = 107/218 (49%), Gaps = 30/218 (13%) Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHE------KTGKALPLLYISTFLIFGLPT 234 LT++ + +FS ++G++ ++ + R + + PLL FL FGL Sbjct: 23 LTLELSFWAILFSVIIGVICAVVMSYRVRGLQTIVKAYIELSRNTPLLIQIFFLYFGLSK 82 Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294 I +K + F V+G F+GGS ++AE VR+G+ +V + Sbjct: 83 ---IGVKLE-GFTCAVIG-LAFLGGS-------------------YMAEAVRAGIESVSK 118 Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354 GQ+E+A+++GLT + R V+ PQA P + + L L+K +S+ A+ A+L+ + Sbjct: 119 GQVESALSIGLTPMQTFRYVVFPQAFAVATPAIGANCLFLMKETSVVSAIAIAELMFMAK 178 Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 II + E + + + YL + + +++F+ L ++ Sbjct: 179 EIIGMDYKTNEALFLLVVFYLIILLPVSVFIGYLERRL 216 >gi|325289251|ref|YP_004265432.1| amino acid ABC transporter membrane protein 1, PAAT family [Syntrophobotulus glycolicus DSM 8271] gi|324964652|gb|ADY55431.1| amino acid ABC transporter membrane protein 1, PAAT family [Syntrophobotulus glycolicus DSM 8271] Length = 233 Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 34/81 (41%), Positives = 52/81 (64%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I S + AAF++E +RS +AV GQ+EAA ++GL +A RLV+LPQ + +P L + Sbjct: 101 ITFSLHIAAFLSEAIRSSYLAVGNGQLEAAYSIGLNDFQALRLVMLPQVLNLSLPTLGNN 160 Query: 331 YLNLLKNSSLAVAVGFADLVS 351 L LLK +S+A +G D++ Sbjct: 161 ALILLKETSVAFTIGLVDIMG 181 >gi|227509546|ref|ZP_03939595.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227190908|gb|EEI70975.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 190 Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 60/188 (31%), Positives = 91/188 (48%), Gaps = 24/188 (12%) Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252 SF+ ++L LF T L++ H K +IS + G+P LVL+ + Y Sbjct: 9 SFIGALILGLFLT-LAQMSHFKLLHWPARAFIS--FMRGVPMLVLLFIIY---------- 55 Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312 F F G+ P + IA + +AF++E+ RS AV RGQ EAA +LGL +R Sbjct: 56 -FGF--GANALP---AAVIAFTINCSAFVSEVFRSSFSAVDRGQWEAAYSLGLPYRTVIA 109 Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI-----I 367 V+ PQA R IP L + L+L K++SLA + +++ I + I I Sbjct: 110 KVIFPQAFRIAIPALGNILLDLFKSTSLAAMITVSEMFMDAKIIAGAYQDYMSIYIVMAI 169 Query: 368 LIWMFIYL 375 + W F +L Sbjct: 170 IYWFFCWL 177 >gi|166999442|ref|ZP_02265281.1| amino acid ABC transporter, permease/ATP-binding protein, His/Glu/Gln/Arg/opine family [Burkholderia mallei PRL-20] gi|243064504|gb|EES46690.1| amino acid ABC transporter, permease/ATP-binding protein, His/Glu/Gln/Arg/opine family [Burkholderia mallei PRL-20] Length = 636 Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 47/141 (33%), Positives = 81/141 (57%), Gaps = 6/141 (4%) Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH-RKATRLVLLPQAM 320 +SP F + + L+ AAF AE +R G+++V +GQ+EAA ALGL R+ATR+V LPQAM Sbjct: 164 ISP-FCAAVLGLTLNHAAFAAEGIRGGILSVDQGQLEAAAALGLPRARQATRIV-LPQAM 221 Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL---IWMFIYLSL 377 R+ +P + + L K SS+ + +L I + + I +++ +W I L++ Sbjct: 222 RAFLPVAFNDLIALAKGSSMVYVLAMPELFYTVQVIYRRNLEVIPLLMVATVWYLIILTV 281 Query: 378 SIMIALFMNRLNAKIALKEKK 398 ++ + R A+ A++E + Sbjct: 282 LSIVQAQVERRYARGAVREPE 302 >gi|126179310|ref|YP_001047275.1| polar amino acid ABC transporter, inner membrane subunit [Methanoculleus marisnigri JR1] gi|125862104|gb|ABN57293.1| amino acid ABC transporter membrane protein 2, PAAT family [Methanoculleus marisnigri JR1] Length = 228 Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 41/116 (35%), Positives = 65/116 (56%) Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338 A+ AE +R LI++ GQM AA ALG+T +A R V+LPQA+R IP L+++++ L+K S Sbjct: 101 AYNAEYIRGALISIKEGQMVAAQALGMTRWQAIRNVILPQALRRAIPGLSNEFIYLIKYS 160 Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394 SLA + +L G + + E +YL L + +N L ++A+ Sbjct: 161 SLAYMITVIELSGAGKLVATKYFTYTESFAAVGIVYLVLVTITTFAVNILEKRVAV 216 >gi|90418081|ref|ZP_01225993.1| permease protein, ABC-type amino acid transporter [Aurantimonas manganoxydans SI85-9A1] gi|90337753|gb|EAS51404.1| permease protein, ABC-type amino acid transporter [Aurantimonas manganoxydans SI85-9A1] Length = 236 Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 40/102 (39%), Positives = 58/102 (56%), Gaps = 7/102 (6%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 F+S IAL +AF +E+ S A+P GQ E A ALGL + LV+LPQ +R + Sbjct: 102 SFVSGMIALGFVFSAFASEVFLSAFRAIPHGQREGAAALGLGPARIMILVILPQIIRIAL 161 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 P L + ++NLLK+++L +G AD I+ QTG A + Sbjct: 162 PGLANLWMNLLKDTALVSVIGLAD-------IMRQTGIAARV 196 >gi|32266982|ref|NP_861014.1| putative ABC-type amino-acid transporter permease protein [Helicobacter hepaticus ATCC 51449] gi|32263034|gb|AAP78080.1| putative ABC-type amino-acid transporter permease protein [Helicobacter hepaticus ATCC 51449] Length = 219 Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 38/118 (32%), Positives = 62/118 (52%), Gaps = 7/118 (5%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I S YT++ +AEI+R GL +VP+GQ EAA + G + ++LPQ R +IP + SQ Sbjct: 91 IGFSLYTSSVMAEIIRGGLNSVPKGQFEAAYSQGFSQFFTLFYIILPQTFRKVIPSMLSQ 150 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL-------IWMFIYLSLSIMI 381 + K++S + A+L I+ Q EI+ ++ I SLS+++ Sbjct: 151 IITTFKDTSFLAGLQIAELTYQSKIILAQLASFQEILAMIGLIAGVYFVICFSLSVLV 208 >gi|326790344|ref|YP_004308165.1| polar amino acid ABC transporter inner membrane protein [Clostridium lentocellum DSM 5427] gi|326541108|gb|ADZ82967.1| polar amino acid ABC transporter, inner membrane subunit [Clostridium lentocellum DSM 5427] Length = 215 Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 33/105 (31%), Positives = 60/105 (57%) Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 + + +T+A +AEIVR GL ++P+GQ E A + G + ++LPQ +SIIP L SQ Sbjct: 90 SFTLFTSAVVAEIVRGGLNSIPKGQFEGAASQGFNFAQTLIYIILPQTFKSIIPALLSQV 149 Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376 + ++K++S V A+ ++ +II+++ F+ L+ Sbjct: 150 ITIIKDTSFLKVVDIAEFTRNSNVVLGSLRGFGQIIMLYGFVALT 194 >gi|332088879|gb|EGI93991.1| arginine transport system permease protein artQ [Shigella boydii 5216-82] Length = 238 Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 55/186 (29%), Positives = 96/186 (51%), Gaps = 8/186 (4%) Query: 217 KALPLLYISTFLIFGLPTLVLI---ALKYQLHFDK-PVLGQFNFIGGSTVSPEFMSLYIA 272 + LP + + F+ FG L+L L F + PV Q + I VSP F+ IA Sbjct: 55 RGLPEILVVLFIYFGSSQLLLTLSDGFTINLGFVQIPV--QMD-IENFDVSP-FLCGVIA 110 Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 LS AA+ ++ +R L AVP GQ E+ +ALGL+ +++PQ R +P L +Q+L Sbjct: 111 LSLLYAAYASQTLRGALKAVPMGQWESGLALGLSKSAIFFRLVMPQMWRHALPGLGNQWL 170 Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 LLK+++L + DL+ +I +T + ++ IYL ++++ + R++ + Sbjct: 171 VLLKDTALVSLISVNDLMLQTKSIATRTQEPFTWYIVAAAIYLVITLLSQYILKRIDLRA 230 Query: 393 ALKEKK 398 E++ Sbjct: 231 TRFERR 236 >gi|300715447|ref|YP_003740250.1| amino acid ABC transporter, permease protein [Erwinia billingiae Eb661] gi|299061283|emb|CAX58392.1| amino acid ABC transporter, permease protein [Erwinia billingiae Eb661] Length = 218 Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 38/108 (35%), Positives = 63/108 (58%), Gaps = 1/108 (0%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G VSP + + +AL+ YT+AF+ +I ++A+P+GQ EA+ LGL + V+LPQ Sbjct: 80 GIDVSP-WTAASLALTFYTSAFLVDIWHGSILALPKGQWEASRCLGLNFGQTLFRVVLPQ 138 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 A+R I P + ++K ++LA +GF +L G + N T Q ++ Sbjct: 139 ALRIGIAPTVGFAVQVIKGTALASIIGFIELTKAGTILNNVTYQPFKV 186 >gi|292487347|ref|YP_003530219.1| putative ABC transporter inner membrane protein [Erwinia amylovora CFBP1430] gi|292898592|ref|YP_003537961.1| ABC transporter permease [Erwinia amylovora ATCC 49946] gi|291198440|emb|CBJ45548.1| ABC transporter, permease protein [Erwinia amylovora ATCC 49946] gi|291552766|emb|CBA19811.1| putative ABC transport system, inner membrane component [Erwinia amylovora CFBP1430] Length = 221 Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 39/102 (38%), Positives = 60/102 (58%) Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 A+ EI+R+G+ P+GQ EAA LGLT ++ V+LP AM+ I P L SQ + ++ Sbjct: 102 GAYSTEIIRAGIRVTPKGQWEAARVLGLTRQQTFIRVVLPPAMKRIYPALVSQCIIVMLG 161 Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379 SS+ V F +L I ++T + E+ L+ +YL+LSI Sbjct: 162 SSVVSQVSFEELTFAANLIQSRTFLSFEVYLVTTLLYLALSI 203 >gi|209516862|ref|ZP_03265712.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. H160] gi|209502678|gb|EEA02684.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. H160] Length = 600 Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 41/129 (31%), Positives = 72/129 (55%), Gaps = 4/129 (3%) Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321 +SP F++ + L+ AAF AE++R G+ +V GQ+EAA ALGL + ++LPQAMR Sbjct: 163 ISP-FLAAVLGLTLNHAAFSAEVIRGGIQSVDHGQLEAAAALGLPRERQAWRIVLPQAMR 221 Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL---IWMFIYLSLS 378 +I+P + + L K SS+ + +L I + + I +++ +W I L++ Sbjct: 222 AILPTAFNDLIALAKGSSMVYVLAMPELFYTVQIIYRRNLEVIPLLMVATVWYLIILTVL 281 Query: 379 IMIALFMNR 387 I +++ R Sbjct: 282 SAIQVYVER 290 >gi|319404434|emb|CBI78037.1| glutamate/aspartate transport system permease protein [Bartonella rochalimae ATCC BAA-1498] Length = 235 Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 27/75 (36%), Positives = 52/75 (69%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I + + AA+ AEI+R+G++++ +GQ A ALG+T+ + R+V+LPQA R+++P +Q Sbjct: 110 ITFTAFEAAYFAEIIRAGILSISQGQKHAGQALGMTYWQNMRIVILPQAFRNMLPVFLTQ 169 Query: 331 YLNLLKNSSLAVAVG 345 + L ++++L A+ Sbjct: 170 IIILFQDTTLVYAIS 184 >gi|207724366|ref|YP_002254763.1| amino acid transmembrane protein [Ralstonia solanacearum MolK2] gi|207739075|ref|YP_002257468.1| amino acid transmembrane protein [Ralstonia solanacearum IPO1609] gi|206589584|emb|CAQ36545.1| amino acid transmembrane protein [Ralstonia solanacearum MolK2] gi|206592447|emb|CAQ59353.1| amino acid transmembrane protein [Ralstonia solanacearum IPO1609] Length = 261 Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 42/113 (37%), Positives = 66/113 (58%), Gaps = 1/113 (0%) Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321 ++P F ++ I LS + AAF AE +R+G+ AVP +EAA +LG R+ V LP A+R Sbjct: 112 LAPLFWAVAI-LSLHKAAFHAEALRAGIDAVPPAMLEAAASLGFGARERLWRVQLPLALR 170 Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374 + +P L + + L+K SSLA A+ +L I Q G A+E +++ + Y Sbjct: 171 AALPSLMNNTVELVKASSLASAIAVGELTYSTLMIWTQRGNALECMVLLLLFY 223 >gi|224369139|ref|YP_002603303.1| GlnP5 [Desulfobacterium autotrophicum HRM2] gi|223691856|gb|ACN15139.1| GlnP5 [Desulfobacterium autotrophicum HRM2] Length = 226 Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 57/227 (25%), Positives = 116/227 (51%), Gaps = 16/227 (7%) Query: 170 FLNNRGLSFPTLTMDT--NAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF 227 FL ++ P + T K+ + ++GI++ L L R + K + Y++ F Sbjct: 4 FLAYAAMALPEMLQGTVITLKLTAGALLIGILIGL-PLSLVRVYGGKLLQPFCSAYLTLF 62 Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287 G P LV + + +++ P LG I S ++ F++L C +AA+ E R Sbjct: 63 R--GTPLLVQL---FVVYYGLPELG----ISFSRMTAAFLTL----GCNSAAYQCEYFRG 109 Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347 + AV +GQM AA +G++ + R ++LPQA+R +IP +++++ ++K +++ + Sbjct: 110 AIQAVSKGQMRAARGIGMSKLQGIRHIILPQALRLVIPAWSNEFIAMVKYTAIVFLIAVP 169 Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394 DL+S + +Q I+ ++ IYL L ++L ++ + ++A+ Sbjct: 170 DLMSRAKILSSQNFAPIQTYILVALIYLVLVGTLSLGLHFVQQRLAV 216 >gi|188534744|ref|YP_001908541.1| Putative amino acid ABC transporter, permease protein [Erwinia tasmaniensis Et1/99] gi|188029786|emb|CAO97665.1| Putative amino acid ABC transporter, permease protein [Erwinia tasmaniensis Et1/99] Length = 218 Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 38/108 (35%), Positives = 63/108 (58%), Gaps = 1/108 (0%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G +SP + + +AL+CYT+AF+ +I + A+P+GQ EA LGL+ + V+LPQ Sbjct: 80 GIDLSP-WAAAALALTCYTSAFLVDIWFGSIRALPKGQWEACRCLGLSTGQTLFRVVLPQ 138 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 A+R I P + ++K ++LA +GF +L G + N T Q ++ Sbjct: 139 ALRIGIAPTVGFAVQVVKGTALASIIGFIELTKAGTILNNVTYQPFKV 186 >gi|16273100|ref|NP_439334.1| arginine transporter permease subunit ArtQ [Haemophilus influenzae Rd KW20] gi|260581121|ref|ZP_05848942.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Haemophilus influenzae RdAW] gi|1168526|sp|P45090|ARTQ_HAEIN RecName: Full=Arginine ABC transporter permease protein ArtQ gi|972902|gb|AAA95979.1| ArtQ [Haemophilus influenzae] gi|1574103|gb|AAC22829.1| arginine ABC transporter, permease protein (artQ) [Haemophilus influenzae Rd KW20] gi|260092250|gb|EEW76192.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Haemophilus influenzae RdAW] Length = 221 Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 47/172 (27%), Positives = 88/172 (51%), Gaps = 8/172 (4%) Query: 228 LIFGLPTLVLIALKY--QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285 L+ GLP ++++ L Y + + G++ G F +ALS AA+ ++ + Sbjct: 53 LLRGLPEIIVVLLVYFGSTELVEMLTGEYIEFGA------FGCGVLALSLIFAAYASQTL 106 Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345 R + A+P+GQ E+ ALGL+ +++PQ R +P L++Q+L LLK+++L +G Sbjct: 107 RGAIQAIPKGQWESGAALGLSKSYTFIHIVMPQVWRHALPGLSTQWLVLLKDTALVSLIG 166 Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 DL+ I T Q I IYL+++++ + + +L + E+ Sbjct: 167 VDDLMHQADLINTNTHQPFTWYGIAALIYLAVTLISQVGIRKLELRFTRFER 218 >gi|326803801|ref|YP_004321619.1| ABC transporter, permease protein [Aerococcus urinae ACS-120-V-Col10a] gi|326651293|gb|AEA01476.1| ABC transporter, permease protein [Aerococcus urinae ACS-120-V-Col10a] Length = 548 Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 41/120 (34%), Positives = 68/120 (56%), Gaps = 1/120 (0%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G +S F +L I +S T A++AE++R G+I V GQ EAA A+G+ H + V+LPQ Sbjct: 395 GIDMSSMFAALLI-VSVNTGAYLAEVIRGGIIGVDDGQSEAAKAIGMNHFQTMTYVVLPQ 453 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378 A+RSI+P L ++++ +K++S+ + +L V + T + I IY L+ Sbjct: 454 AIRSILPALGNEFVINIKDTSVLNVIAVTELFFVSKSAAGTTYLTFQTFFITAIIYFVLT 513 >gi|222081149|ref|YP_002540512.1| amino acid ABC transporter [Agrobacterium radiobacter K84] gi|221725828|gb|ACM28917.1| amino acid ABC transporter [Agrobacterium radiobacter K84] Length = 219 Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 49/166 (29%), Positives = 84/166 (50%), Gaps = 13/166 (7%) Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV 262 FA L+R K + YI +I G+P L+++ L Y + + G F Sbjct: 37 FAVALARTSSIKAVRIAAGTYIQ--VIQGIPVLMILFLSY---YGLSLAG-FEL------ 84 Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322 P ++ +++ Y + ++AEI R + AVP+ Q EA+ +L +T + R V+LPQA+R Sbjct: 85 -PPLIAAGASMTIYASGYLAEIWRGCIQAVPKQQWEASESLAMTRLQQYRYVILPQAVRI 143 Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368 +PP + ++KN+S+ +GF +L G I N T Q + + Sbjct: 144 SLPPTVGFAVQVVKNTSITSIIGFVELARAGQLINNATFQPFRVFI 189 >gi|116254189|ref|YP_770027.1| transmembrane component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] gi|115258837|emb|CAK09943.1| putative transmembrane component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] Length = 215 Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 43/121 (35%), Positives = 68/121 (56%) Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 L+ Y +A++AEI RSG+ AVPRGQ +AA +LGL RL++LPQA R P + Sbjct: 93 LTFYASAYLAEIWRSGVEAVPRGQWDAAASLGLHRLLELRLIILPQAFRITRAPTVGFLV 152 Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 L+K+++LA +GF +L+ I N T + ++ + I+ +L + + L K Sbjct: 153 QLIKSTALASILGFDELLKTANAINNATFEPFKVYGLVALIFFALCYPLTQYARFLEKKA 212 Query: 393 A 393 A Sbjct: 213 A 213 >gi|254194309|ref|ZP_04900741.1| amino acid ABC transporter, permease/ATP-binding protein, His/Glu/Gln/Arg/opine family [Burkholderia pseudomallei S13] gi|169651060|gb|EDS83753.1| amino acid ABC transporter, permease/ATP-binding protein, His/Glu/Gln/Arg/opine family [Burkholderia pseudomallei S13] Length = 636 Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 47/141 (33%), Positives = 81/141 (57%), Gaps = 6/141 (4%) Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH-RKATRLVLLPQAM 320 +SP F + + L+ AAF AE +R G+++V +GQ+EAA ALGL R+ATR+V LPQAM Sbjct: 164 ISP-FCAAVLGLTLNHAAFAAEGIRGGILSVDQGQLEAAAALGLPRARQATRIV-LPQAM 221 Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL---IWMFIYLSL 377 R+ +P + + L K SS+ + +L I + + I +++ +W I L++ Sbjct: 222 RAFLPVAFNDLIALAKGSSMVYVLAMPELFYTVQVIYRRNLEVIPLLMVATVWYLIILTV 281 Query: 378 SIMIALFMNRLNAKIALKEKK 398 ++ + R A+ A++E + Sbjct: 282 LSIVQAQVERRYARGAVREPE 302 >gi|126457623|ref|YP_001076298.1| polar amino acid ABC transporter ATPase [Burkholderia pseudomallei 1106a] gi|126231391|gb|ABN94804.1| amino acid ABC transporter, permease/ATP-binding protein, His/Glu/Gln/Arg/opine family [Burkholderia pseudomallei 1106a] Length = 636 Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 47/141 (33%), Positives = 81/141 (57%), Gaps = 6/141 (4%) Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH-RKATRLVLLPQAM 320 +SP F + + L+ AAF AE +R G+++V +GQ+EAA ALGL R+ATR+V LPQAM Sbjct: 164 ISP-FCAAVLGLTLNHAAFAAEGIRGGILSVDQGQLEAAAALGLPRARQATRIV-LPQAM 221 Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL---IWMFIYLSL 377 R+ +P + + L K SS+ + +L I + + I +++ +W I L++ Sbjct: 222 RAFLPVAFNDLIALAKGSSMVYVLAMPELFYTVQVIYRRNLEVIPLLMVATVWYLIILTV 281 Query: 378 SIMIALFMNRLNAKIALKEKK 398 ++ + R A+ A++E + Sbjct: 282 LSIVQAQVERRYARGAVREPE 302 >gi|186473900|ref|YP_001861242.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia phymatum STM815] gi|184196232|gb|ACC74196.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia phymatum STM815] Length = 216 Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 45/125 (36%), Positives = 69/125 (55%), Gaps = 1/125 (0%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G VSP ++ A+S +A++IAEI+R G + +P GQ+EAA LGL+ R + +PQ Sbjct: 81 GINVSPIVAAIS-AVSLCSASYIAEILRGGFMNIPPGQIEAARMLGLSPLDMLRRIQVPQ 139 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378 A R +P L ++ + L+K SSL VG A++ I T + +E L IY + Sbjct: 140 AFRMTLPSLVNEMVLLIKASSLISVVGVAEITRTAQNIAASTYRPLEAYLAAGLIYFVIC 199 Query: 379 IMIAL 383 +AL Sbjct: 200 GALAL 204 >gi|50123002|ref|YP_052169.1| octopine transport system permease [Pectobacterium atrosepticum SCRI1043] gi|49613528|emb|CAG76979.1| octopine transport system permease protein [Pectobacterium atrosepticum SCRI1043] Length = 242 Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 53/187 (28%), Positives = 89/187 (47%), Gaps = 12/187 (6%) Query: 220 PLLYIS---TFLIFGLPTLVLIALKY-----QLHFDKPVLGQFNFIGGSTVSPEFMSLYI 271 P+ Y++ T LI G+P L++I L Y L + G F G P F++ + Sbjct: 60 PVRYLADGYTTLIRGVPDLLIIYLLYFGGSSALTLLAKLFGSNEFFG----FPGFLAGVL 115 Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 A+ + A E+ R AV +G++EAA A G+ R +++P +R IPPL + + Sbjct: 116 AVGISSGAQQTEVYRGAFYAVSKGEIEAAKACGMPMLLRLRRIIVPLLLRHAIPPLGNVW 175 Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 +LK S+L G A+L++ T TG+ + + +YL +SI M R + Sbjct: 176 QLVLKTSALVSVTGVAELMTQSQTGAGSTGKPFDFFMAAALLYLLISICSGWIMRRAESH 235 Query: 392 IALKEKK 398 + K+ Sbjct: 236 YSRGVKR 242 Score = 37.4 bits (85), Expect = 4.5, Method: Compositional matrix adjust. Identities = 18/69 (26%), Positives = 34/69 (49%) Query: 81 SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140 + + +L+G T LA G + IGT+ ++ N+ V ++ Y + R +P Sbjct: 17 GEHGWGKLLLIGAGMTLALAICGFLLGAAIGTIGAWSKICGNRPVRYLADGYTTLIRGVP 76 Query: 141 PLVVIFFLY 149 L++I+ LY Sbjct: 77 DLLIIYLLY 85 >gi|25028402|ref|NP_738456.1| glutamate transport system permiase GluC [Corynebacterium efficiens YS-314] gi|259507459|ref|ZP_05750359.1| glutamate transport system permease protein GluC [Corynebacterium efficiens YS-314] gi|23493687|dbj|BAC18656.1| glutamate transport system permiase GluC [Corynebacterium efficiens YS-314] gi|259164947|gb|EEW49501.1| glutamate transport system permease protein GluC [Corynebacterium efficiens YS-314] Length = 249 Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 44/123 (35%), Positives = 73/123 (59%), Gaps = 3/123 (2%) Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335 YT+AF+AE +RSG+ V GQ EAA +LGL R ++ PQA+R+ I PL + + L Sbjct: 128 YTSAFVAESLRSGINTVHFGQAEAARSLGLGFSDIFRSIIFPQAVRAAIIPLGNTLIALT 187 Query: 336 KNSSLA--VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393 KN+++A + VG A L+ + TI N + I+ ++ L++ + L + +L K+A Sbjct: 188 KNTTIASVIGVGEASLL-MKSTIENHANMLFVVFAIFAVGFMILTLPMGLGLGKLAEKMA 246 Query: 394 LKE 396 +K+ Sbjct: 247 VKK 249 >gi|295096441|emb|CBK85531.1| L-arginine ABC transporter membrane protein [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 238 Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 55/187 (29%), Positives = 96/187 (51%), Gaps = 10/187 (5%) Query: 217 KALPLLYISTFLIFGLPTLVLI---ALKYQLHFDK-PVLGQF-NFIGGSTVSPEFMSLYI 271 + LP + + F+ FG L+L L F + PV Q NF VSP F+ I Sbjct: 55 RGLPEILVVLFIYFGSSQLLLTLSDGFTINLGFAQIPVQMQIENF----DVSP-FLCGVI 109 Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 ALS +A+ ++ +R L AVP+GQ E+ ALGL+ +++PQ R +P L +Q+ Sbjct: 110 ALSLLYSAYASQTLRGALKAVPQGQWESGQALGLSKAAIFFRLVMPQMWRHALPGLGNQW 169 Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 L LLK+++L + DL+ +I +T + ++ IYL ++++ + R++ + Sbjct: 170 LVLLKDTALVSLISVNDLMLQTKSIATRTQEPFTWYIVAAAIYLVITLLSQYVLKRIDLR 229 Query: 392 IALKEKK 398 E++ Sbjct: 230 ATRFERR 236 >gi|257870618|ref|ZP_05650271.1| amino acid ABC transporter [Enterococcus gallinarum EG2] gi|257804782|gb|EEV33604.1| amino acid ABC transporter [Enterococcus gallinarum EG2] Length = 528 Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 39/107 (36%), Positives = 62/107 (57%) Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 +S T A+++EIVR G+ AV GQ EAA A+G+TH + V+LPQ MR+I+P ++ + Sbjct: 394 VSINTGAYMSEIVRGGIFAVDDGQFEAAQAIGMTHWQTMFKVVLPQVMRNILPATGNEII 453 Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379 +K++++ + ADL G + Q + I IYL L+I Sbjct: 454 INIKDTAVLSVISVADLFFQGTSAAGTNYQYFQTFAIIGAIYLVLTI 500 >gi|299821271|ref|ZP_07053159.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Listeria grayi DSM 20601] gi|299816936|gb|EFI84172.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Listeria grayi DSM 20601] Length = 254 Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 60/211 (28%), Positives = 102/211 (48%), Gaps = 18/211 (8%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY---QLHFD 247 +F F++ I++S + H + + + Y+S F P ++ I L Y L D Sbjct: 50 LFGFLIAILMSFIQIK-----HVRILEPISKFYVSFFR--STPAILHIMLIYLGIPLIVD 102 Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307 K + QF+ + P + + IALS +++ E +RSG+IAV GQ+EAA ++G+TH Sbjct: 103 K-LSSQFDLGLSANKIPVAIFVIIALSFTAGSYLTESIRSGIIAVDAGQIEAAYSIGMTH 161 Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367 R+ R VL PQA +P T+ + L +S+A V ++ + + ++ Sbjct: 162 REMLRRVLFPQAFIIALPNFTNLAIGFLHTTSIAAIVAVPEITGTATIVASDNYAFLDAF 221 Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 + IY L+++I A AL EKK Sbjct: 222 IAAAIIYWLLTMII-------EAIHALLEKK 245 >gi|146317962|ref|YP_001197674.1| ABC-type amino acid transport system, permease component [Streptococcus suis 05ZYH33] gi|146320149|ref|YP_001199860.1| ABC-type amino acid transport system, permease component [Streptococcus suis 98HAH33] gi|253751185|ref|YP_003024326.1| transport system membrane protein [Streptococcus suis SC84] gi|253753086|ref|YP_003026226.1| transport system membrane protein [Streptococcus suis P1/7] gi|253754908|ref|YP_003028048.1| transport system membrane protein [Streptococcus suis BM407] gi|145688768|gb|ABP89274.1| ABC-type amino acid transport system, permease component [Streptococcus suis 05ZYH33] gi|145690955|gb|ABP91460.1| ABC-type amino acid transport system, permease component [Streptococcus suis 98HAH33] gi|251815474|emb|CAZ51052.1| transport system membrane protein [Streptococcus suis SC84] gi|251817372|emb|CAZ55108.1| transport system membrane protein [Streptococcus suis BM407] gi|251819331|emb|CAR44693.1| transport system membrane protein [Streptococcus suis P1/7] gi|292557745|gb|ADE30746.1| Amino acid ABC transporter, permease protein [Streptococcus suis GZ1] gi|319757454|gb|ADV69396.1| ABC-type amino acid transport system, permease component [Streptococcus suis JS14] Length = 223 Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 45/167 (26%), Positives = 88/167 (52%), Gaps = 13/167 (7%) Query: 228 LIFGLPTLVLIALKYQLHFDKPVLG-QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286 L+ G+P +VL+ + ++F P +G Q + I S IA + ++A+I+EI+R Sbjct: 67 LMRGIPLMVLL---FFIYFGLPFMGLQLDAISASI---------IAFTSMSSAYISEIIR 114 Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346 + L A+ +GQ EAA +LGL R +++PQA R +PPL++ L+++K++SL + Sbjct: 115 ASLSAIDKGQWEAARSLGLRTNVIHRKIIIPQAFRIALPPLSNVLLDMVKSTSLTAMITV 174 Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393 ++ + + + + + IY + + A +L ++A Sbjct: 175 PEIFNKAKIVGGAKSDYMTVYICVALIYWVICTLYAFGQLKLEKRLA 221 >gi|322513148|ref|ZP_08066280.1| polar amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Actinobacillus ureae ATCC 25976] gi|322121080|gb|EFX92903.1| polar amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Actinobacillus ureae ATCC 25976] Length = 238 Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 52/204 (25%), Positives = 103/204 (50%), Gaps = 19/204 (9%) Query: 193 SFVLGIVLS-----LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247 SF++G+ ++ + T ++ H + A+ +YIS +I G P LV I++ + + Sbjct: 42 SFIIGMAIAVGVALIRVTPVNGMLH-RIALAIVKVYIS--IIRGTPMLVQISVVF---YG 95 Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307 P +G + + P + I S A+ +E VR+ + +VP+GQ EA +G+T+ Sbjct: 96 LPAIGVY-------IDP-IPAAIIGFSLNIGAYGSETVRAAISSVPKGQWEAGYTIGMTY 147 Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367 + R ++ PQA+R +PPL++ ++ L K++SLA V ++ V + N + + + Sbjct: 148 MQTFRRIIAPQAIRVAVPPLSNTFIGLFKDTSLASVVTVTEMFRVAQQMANMSYDFLPVY 207 Query: 368 LIWMFIYLSLSIMIALFMNRLNAK 391 + IY ++ L +L + Sbjct: 208 IEAGLIYWCFCWVLFLIQAKLECR 231 >gi|260889042|ref|ZP_05900305.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Leptotrichia hofstadii F0254] gi|260861102|gb|EEX75602.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Leptotrichia hofstadii F0254] Length = 521 Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 34/132 (25%), Positives = 78/132 (59%), Gaps = 1/132 (0%) Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320 +SP +L+I +S T A+++EI+R G+ ++ GQ EAA A+G+T+ + + ++ PQ Sbjct: 374 NLSPMVAALFI-VSINTGAYMSEIIRGGIDSIDNGQFEAAKAIGMTNFQLMQSIIFPQMF 432 Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380 R+I+P + ++ + +K++S+ + +L + +++ + E+ +I IY L+ Sbjct: 433 RNILPMIGNELIVNIKDTSVLNVISVTELFFISNSVVGTYSRYYEVFIITSVIYFFLTFT 492 Query: 381 IALFMNRLNAKI 392 ++L + ++ +I Sbjct: 493 LSLILKQIEKRI 504 >gi|237510507|ref|ZP_04523222.1| ABC-type polar amino acid transport system, ATPase component [Burkholderia pseudomallei MSHR346] gi|235002712|gb|EEP52136.1| ABC-type polar amino acid transport system, ATPase component [Burkholderia pseudomallei MSHR346] Length = 636 Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 47/141 (33%), Positives = 81/141 (57%), Gaps = 6/141 (4%) Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH-RKATRLVLLPQAM 320 +SP F + + L+ AAF AE +R G+++V +GQ+EAA ALGL R+ATR+V LPQAM Sbjct: 164 ISP-FCAAVLGLTLNHAAFAAEGIRGGILSVDQGQLEAAAALGLPRARQATRIV-LPQAM 221 Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL---IWMFIYLSL 377 R+ +P + + L K SS+ + +L I + + I +++ +W I L++ Sbjct: 222 RAFLPVAFNDLIALAKGSSMVYVLAMPELFYTVQVIYRRNLEVIPLLMVATVWYLIILTV 281 Query: 378 SIMIALFMNRLNAKIALKEKK 398 ++ + R A+ A++E + Sbjct: 282 LSIVQAQVERRYARGAVREPE 302 >gi|222082286|ref|YP_002541651.1| amino acid ABC transporter [Agrobacterium radiobacter K84] gi|221726965|gb|ACM30054.1| amino acid ABC transporter [Agrobacterium radiobacter K84] Length = 221 Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 38/117 (32%), Positives = 65/117 (55%) Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340 ++E++R+G+ +V RGQ EAA + G+T + R V+ PQA+R ++PP Y+ LK SSL Sbjct: 97 MSEVMRAGIESVGRGQWEAAQSSGMTFGQTMRHVVGPQALRVVLPPSVGVYVTTLKESSL 156 Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 A +G+ +L G + TG +L+ +Y ++ I+L L + + K Sbjct: 157 ASIIGYVELTKTGLLVRESTGGGFAPLLMLGVLYFLINYGISLAGGVLERRYNVGTK 213 >gi|329927203|ref|ZP_08281501.1| putative arginine ABC transporter, permease protein ArtQ [Paenibacillus sp. HGF5] gi|328938603|gb|EGG34986.1| putative arginine ABC transporter, permease protein ArtQ [Paenibacillus sp. HGF5] Length = 219 Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 36/103 (34%), Positives = 60/103 (58%) Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316 IG V F++ +A AA+ AEI R GL+A+ +GQ EA+ LGL + T V+L Sbjct: 82 IGEYLVLDRFVAACLAFVLNYAAYFAEIFRGGLLAIDKGQYEASKVLGLNRWQTTTKVIL 141 Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359 PQ R +P ++++ + L+K+++L AV +L+ T +N+ Sbjct: 142 PQMFRVALPAVSNESITLVKDTALLYAVAVPELLHFAYTAVNR 184 >gi|330811618|ref|YP_004356080.1| Putative ABC transporter, permease component [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327379726|gb|AEA71076.1| Putative ABC transporter, permease component [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 218 Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 34/97 (35%), Positives = 58/97 (59%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + + + A +IAE+ RSGL AVPR Q EA AL + A R ++LPQA+R I+PPL + Sbjct: 94 LGIGLHYACYIAEVYRSGLDAVPRAQWEAVTALNIAPYDAYRNIILPQALRPIVPPLGNY 153 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367 + +LK++ + A+ +++ I ++ + +E I Sbjct: 154 LVAMLKDTPVLSAITVVEIMQQAKNIGSENFRYLEPI 190 >gi|119964017|ref|YP_946818.1| amino acid ABC transporter permease [Arthrobacter aurescens TC1] gi|119950876|gb|ABM09787.1| putative amino acid ABC transporter, permease protein [Arthrobacter aurescens TC1] Length = 219 Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 48/160 (30%), Positives = 81/160 (50%), Gaps = 34/160 (21%) Query: 190 FVFSFVLGIVLSLFATRLSRH--------FHEKTGKALPLLYISTFLIFGLPTLVLIALK 241 F F VL +V++L RLS + F+ + PLL + FGLP++ Sbjct: 29 FAFGLVLALVVALM--RLSPNWLLSGIGRFYVSVIRGTPLLVQLFVIFFGLPSI------ 80 Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301 G + P + S IA S + AEI+R+ +++VP+GQ EA Sbjct: 81 -----------------GIRLDP-WPSAIIAFSLNVGGYAAEIIRAAILSVPKGQWEAGH 122 Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341 +G++ +A ++LPQA R +PPL++ +++L+K++SLA Sbjct: 123 TIGMSRPQALVRIILPQAARVSVPPLSNTFISLVKDTSLA 162 >gi|145627845|ref|ZP_01783646.1| arginine transporter permease subunit ArtQ [Haemophilus influenzae 22.1-21] gi|145639302|ref|ZP_01794908.1| arginine transporter permease subunit ArtQ [Haemophilus influenzae PittII] gi|144979620|gb|EDJ89279.1| arginine transporter permease subunit ArtQ [Haemophilus influenzae 22.1-21] gi|145271605|gb|EDK11516.1| arginine transporter permease subunit ArtQ [Haemophilus influenzae PittII] gi|309751178|gb|ADO81162.1| Arginine ABC transporter, permease protein ArtQ [Haemophilus influenzae R2866] Length = 221 Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 47/172 (27%), Positives = 88/172 (51%), Gaps = 8/172 (4%) Query: 228 LIFGLPTLVLIALKY--QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285 L+ GLP ++++ L Y + + G++ G F +ALS AA+ ++ + Sbjct: 53 LLRGLPEIIVVLLVYFGSTELVEMLTGEYIEFGA------FGCGVLALSLIFAAYASQTL 106 Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345 R + A+P+GQ E+ ALGL+ +++PQ R +P L++Q+L LLK+++L +G Sbjct: 107 RGAIQAIPKGQWESGAALGLSKSYTFIHIVMPQVWRHALPGLSTQWLVLLKDTALVSLIG 166 Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 DL+ I T Q I IYL+++++ + + +L + E+ Sbjct: 167 VDDLMHQADLINTNTHQPFTWYGIAALIYLAVTLISQVGIRKLELRFTRFER 218 >gi|70730911|ref|YP_260652.1| amino acid ABC transporter permease [Pseudomonas fluorescens Pf-5] gi|68345210|gb|AAY92816.1| amino acid ABC transporter, permease protein [Pseudomonas fluorescens Pf-5] Length = 220 Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 50/180 (27%), Positives = 86/180 (47%), Gaps = 24/180 (13%) Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273 + G+ P L + + FGLP+ G T+S F + +AL Sbjct: 60 ELGRGAPALILLQYFYFGLPS-----------------------AGLTLS-SFWAAALAL 95 Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333 + TAA+ +EI+R G+ AV +GQ EAA +GL A R ++LPQAMR +P L + Sbjct: 96 AYCTAAYTSEIIRGGIEAVAQGQNEAAEVIGLNRFDALRFIILPQAMRVALPSLLGFSIM 155 Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393 + + +SL + ++VS I + T + + ++ + +Y ++ L + L K+A Sbjct: 156 MFQAASLCFTIALPEIVSRASAIGSSTFEYMPVLTLAGLMYAAVCAPATLGVAALEKKLA 215 >gi|317498348|ref|ZP_07956645.1| binding-protein-dependent transport system inner membrane component [Lachnospiraceae bacterium 5_1_63FAA] gi|316894370|gb|EFV16555.1| binding-protein-dependent transport system inner membrane component [Lachnospiraceae bacterium 5_1_63FAA] Length = 218 Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 44/129 (34%), Positives = 73/129 (56%), Gaps = 10/129 (7%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I S AA+ AEI RSG+ A+P+GQ EAA LG + ++LPQ ++ I P L S+ Sbjct: 94 IGFSLNYAAYFAEIYRSGIQAIPKGQYEAAKVLGFNRSQTFFKIILPQVVKIITPSLGSE 153 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 + L+K++SLA +G ++ V NQ ++ + IYL ++ + L MN + + Sbjct: 154 CMTLVKDTSLAHVIGVMEIYVVA---TNQMARSRGM------IYLVVAGIFYLIMNAIVS 204 Query: 391 KI-ALKEKK 398 K+ ++ EK+ Sbjct: 205 KVFSVIEKR 213 >gi|119945246|ref|YP_942926.1| ABC polar amino acid transporter inner membrane protein [Psychromonas ingrahamii 37] gi|119863850|gb|ABM03327.1| ABC polar amino acid transporter inner membrane protein [Psychromonas ingrahamii 37] Length = 216 Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 39/136 (28%), Positives = 78/136 (57%), Gaps = 1/136 (0%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G +SP F++ I LS YT AF++E+ RSG +VP A+ +LG+T+ + + +P Sbjct: 82 GHPLSP-FIAGSIILSLYTMAFMSEVFRSGFDSVPTSMRTASRSLGMTYLQTVIHIRVPI 140 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378 MR++ P L+++K+S+L +G+ +L+ G +I++T + + I++ Y +S Sbjct: 141 GMRAVFPSWLGVALSVIKDSALVSVIGYMELLRTGEQLISRTQEPLMILIGIGLFYFMIS 200 Query: 379 IMIALFMNRLNAKIAL 394 ++ + + K+A+ Sbjct: 201 YPLSRYGKHVERKMAI 216 Score = 36.2 bits (82), Expect = 8.3, Method: Compositional matrix adjust. Identities = 21/79 (26%), Positives = 45/79 (56%), Gaps = 4/79 (5%) Query: 81 SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140 +DS + IL G +NT +++ ++ TI+G L+G R +NK V + ++++ R++ Sbjct: 10 NDSGF---ILTGILNTIYISVVAIVIGTILGLLIGFLRAESNKSVNLVLGGFLDILRSV- 65 Query: 141 PLVVIFFLYKSVLSVLPIP 159 PL++ L+ + + + P Sbjct: 66 PLIIQLILFSTYVGAMGHP 84 >gi|307248651|ref|ZP_07530665.1| Amino acid ABC transporter, permease protein [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|306854862|gb|EFM87051.1| Amino acid ABC transporter, permease protein [Actinobacillus pleuropneumoniae serovar 2 str. S1536] Length = 138 Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 37/128 (28%), Positives = 69/128 (53%), Gaps = 6/128 (4%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I S A+ +E VR+ + +VP+GQ EA +G+T+ + R ++ PQA+R +PPL++ Sbjct: 11 IGFSLNIGAYGSETVRAAISSVPKGQWEAGYTIGMTYMQTFRRIIAPQAIRVAVPPLSNT 70 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI-----ILIWMFIYLSLSIMIALFM 385 ++ L K++SLA V ++ V + N + + + ++ W F + L ++ A Sbjct: 71 FIGLFKDTSLASVVTVTEMFRVAQQMANMSYDFLPVYIEAGLIYWCFCW-GLFLIQAKLE 129 Query: 386 NRLNAKIA 393 R N +A Sbjct: 130 RRFNRFVA 137 >gi|228477743|ref|ZP_04062372.1| ABC-type amino acid transport permease component [Streptococcus salivarius SK126] gi|228250632|gb|EEK09843.1| ABC-type amino acid transport permease component [Streptococcus salivarius SK126] Length = 228 Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 39/125 (31%), Positives = 70/125 (56%), Gaps = 1/125 (0%) Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321 V+P + + +I S T ++EI+RS L+ V +GQ+EAA A+GLT R+A ++ PQA++ Sbjct: 96 VNPLYYA-FIIYSLMTTGSLSEIIRSALLTVDKGQLEAAQAIGLTTRQAYLRIVFPQALK 154 Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 S +P L + +N++K +SL + D+ ++ Q E + +YL + +I Sbjct: 155 SALPNLCNLVINIVKGTSLVFVMTIKDITAIARVEAAYGYQYFESYFVIFILYLIICGII 214 Query: 382 ALFMN 386 + N Sbjct: 215 QVLFN 219 >gi|70729566|ref|YP_259304.1| amino acid ABC transporter permease [Pseudomonas fluorescens Pf-5] gi|68343865|gb|AAY91471.1| amino acid ABC transporter, permease protein [Pseudomonas fluorescens Pf-5] Length = 239 Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 51/153 (33%), Positives = 80/153 (52%), Gaps = 5/153 (3%) Query: 231 GLP---TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287 GLP TL++I Q+ K +LG + G ++ F++ IA S AAF +EI + Sbjct: 68 GLPELLTLLIIYYGCQIAAQK-ILGALGYPGEVAIN-TFVAAMIAFSLVFAAFSSEIWLA 125 Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347 +P+GQ EAA AL L+ R VLLPQ R +P L++ +L+LLK++SL + Sbjct: 126 AFKTLPKGQYEAARALSLSRRTTFNRVLLPQLTRIALPGLSNNWLSLLKDTSLVSTISLV 185 Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380 DL+ ++ T + + + F YL S + Sbjct: 186 DLMRQTNLAVSVTKEPMLFYSVACFGYLFFSAL 218 >gi|148257735|ref|YP_001242320.1| ABC transporter permease/ATP-binding protein [Bradyrhizobium sp. BTAi1] gi|146409908|gb|ABQ38414.1| amino acid ABC transporter ATP-binding protein, PAAT family / amino acid ABC transporter membrane protein, PAAT family [Bradyrhizobium sp. BTAi1] Length = 536 Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 40/111 (36%), Positives = 62/111 (55%) Query: 275 CYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNL 334 C A FIAE++RSG++ V RGQ+ A ALG+T R ++ PQA+R++IP ++ ++ Sbjct: 95 CNEAPFIAEMLRSGVLGVDRGQLLAGQALGMTPGVLMRRIIAPQAIRTMIPAFGNEAVSA 154 Query: 335 LKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 LKNSSLA + +L + + T I IYL L+ I++ Sbjct: 155 LKNSSLASVIAVQELTLRSTQLASSTFDFFSIFFASGLIYLVLTGAISVIQ 205 >gi|310766634|gb|ADP11584.1| Putative amino-acid transport system permease protein [Erwinia sp. Ejp617] Length = 227 Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 40/128 (31%), Positives = 74/128 (57%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + I + A+ +EI+R+ L++VP+GQ EAA ++G++ + R +++PQA R +P Sbjct: 89 FPAAVIGFTLNIGAYTSEIIRATLLSVPKGQWEAAHSIGMSWSQTLRRIVMPQAARVAVP 148 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 PL++ ++ L+K++SLA + +L I T Q + + IYL LS +++ Sbjct: 149 PLSNTFIALVKDTSLASVITVPELFLAAQRIAAVTYQPLILYTEAAIIYLLLSSVLSALQ 208 Query: 386 NRLNAKIA 393 RL ++A Sbjct: 209 ARLEKRLA 216 >gi|304407617|ref|ZP_07389269.1| polar amino acid ABC transporter, inner membrane subunit [Paenibacillus curdlanolyticus YK9] gi|304343568|gb|EFM09410.1| polar amino acid ABC transporter, inner membrane subunit [Paenibacillus curdlanolyticus YK9] Length = 261 Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 41/136 (30%), Positives = 72/136 (52%) Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320 T +P + + S ++ A+I+E++R ++AV RGQ EAA A+G+ +A ++LPQA+ Sbjct: 93 TRTPALFFVILTYSLHSGAYISEVIRGAVMAVDRGQAEAAYAVGMNGFQAFSRIVLPQAI 152 Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380 IP + + LK++SLA +G D+ TI + + IE L +Y +S Sbjct: 153 SLSIPVFGNVVIANLKDTSLAFTLGILDISGKAKTIGTLSQRFIETYLSLAVLYFIISFA 212 Query: 381 IALFMNRLNAKIALKE 396 + +RL ++ E Sbjct: 213 LQKLFDRLEKRMLRHE 228 >gi|261337915|ref|ZP_05965799.1| glutamate permease [Bifidobacterium gallicum DSM 20093] gi|270277399|gb|EFA23253.1| glutamate permease [Bifidobacterium gallicum DSM 20093] Length = 225 Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 33/67 (49%), Positives = 44/67 (65%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + LS YTAAF+ E +RSG+ VP GQ EA ALGL ++ L++LPQA R + PL + Sbjct: 98 VGLSLYTAAFVCESLRSGINTVPLGQAEAGRALGLNFFQSATLIILPQAFRGSVAPLGNT 157 Query: 331 YLNLLKN 337 + LLKN Sbjct: 158 LIALLKN 164 >gi|209517852|ref|ZP_03266686.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. H160] gi|209501685|gb|EEA01707.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. H160] Length = 229 Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 39/133 (29%), Positives = 67/133 (50%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F++ I L A+ E R +AVPRGQ+EA A G++ R+ +L PQ MR +P Sbjct: 94 FLAGVITLGFIYGAYFTETFRGAFLAVPRGQIEAGFAYGMSARRVFTRILFPQMMRFALP 153 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 + + + L+K ++L +G AD+V T L IYL+++ + L + Sbjct: 154 GIGNNWQVLVKATALVSIIGLADVVKASQDAGKSTQSFFFFTLATGAIYLAITTISNLVL 213 Query: 386 NRLNAKIALKEKK 398 NRL + ++ ++ Sbjct: 214 NRLEKRYSIGVRR 226 >gi|153814547|ref|ZP_01967215.1| hypothetical protein RUMTOR_00761 [Ruminococcus torques ATCC 27756] gi|317500589|ref|ZP_07958810.1| hypothetical protein HMPREF1026_00753 [Lachnospiraceae bacterium 8_1_57FAA] gi|331089310|ref|ZP_08338211.1| hypothetical protein HMPREF1025_01794 [Lachnospiraceae bacterium 3_1_46FAA] gi|145848041|gb|EDK24959.1| hypothetical protein RUMTOR_00761 [Ruminococcus torques ATCC 27756] gi|316898022|gb|EFV20072.1| hypothetical protein HMPREF1026_00753 [Lachnospiraceae bacterium 8_1_57FAA] gi|330405491|gb|EGG85023.1| hypothetical protein HMPREF1025_01794 [Lachnospiraceae bacterium 3_1_46FAA] Length = 228 Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 48/180 (26%), Positives = 94/180 (52%), Gaps = 12/180 (6%) Query: 220 PLLYISTFLIF---GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 PL Y++ +++ G P ++ + + Y F V+G N I G + F++ +A Sbjct: 50 PLSYLTKIIVWIIRGTPLMIQLLIIY--FFPGLVMG--NNIWGGGEAGRFLAAAVAFIFN 105 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 A + +EI R G+ VP GQ EA + LG+T + V L Q ++ I+PP++++ + L+K Sbjct: 106 YACYFSEIYRGGIQGVPHGQEEAGLVLGMTRSQIFFKVTLLQMVKRIVPPMSNEIITLVK 165 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI----YLSLSIMIALFMNRLNAKI 392 ++SLA + +++ G + + Q I ++ +F YL + ++ + + RL K+ Sbjct: 166 DTSLARIIALQEIIWAGQAFLKGS-QGIAGVIWPLFFTAVYYLIFNGILTVLLGRLEKKL 224 >gi|330900315|gb|EGH31734.1| amino acid ABC transporter permease [Pseudomonas syringae pv. japonica str. M301072PT] Length = 175 Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 38/117 (32%), Positives = 67/117 (57%), Gaps = 11/117 (9%) Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292 P LVLI L Y F P LG + S + LS Y A++ E+ R+GL+++ Sbjct: 68 PILVLILLIY---FALPGLG--------IRLDKLASFIVTLSLYAGAYLTEVFRAGLLSI 116 Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349 +GQ EA +A+GL + +++P +R+++P L++ +++L K++SLA A+ +L Sbjct: 117 HKGQREAGLAIGLGEWQVRAYIIVPVMLRNVLPALSNNFISLFKDTSLAAAIAVPEL 173 >gi|325832049|ref|ZP_08165146.1| ABC transporter, permease protein [Eggerthella sp. HGA1] gi|325486370|gb|EGC88822.1| ABC transporter, permease protein [Eggerthella sp. HGA1] Length = 370 Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 30/70 (42%), Positives = 51/70 (72%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +A+ Y +I+E+VRSG+ ++ RGQ EAA + G ++ ++ +++LPQA+R I+PPL Q Sbjct: 98 LAIGIYHGGYISEVVRSGIGSIHRGQFEAAKSQGFSYWQSMFVIILPQAIRIIMPPLAVQ 157 Query: 331 YLNLLKNSSL 340 NL+KN+S+ Sbjct: 158 AANLVKNTSV 167 >gi|306833383|ref|ZP_07466510.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus bovis ATCC 700338] gi|304424153|gb|EFM27292.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus bovis ATCC 700338] Length = 213 Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 32/91 (35%), Positives = 53/91 (58%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +A + AA+ AEI R G+ A+P+GQ EAA L L + ++LPQ + ++P + ++ Sbjct: 89 LAFTLNYAAYFAEIFRGGIAAIPKGQYEAAKVLKLNQLQTIHYIILPQVFKIVLPSVFNE 148 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361 +NL+K+SSL +G DL+ T N+ Sbjct: 149 IINLVKDSSLVYVLGVGDLLLASKTAANRDA 179 >gi|149912071|ref|ZP_01900662.1| amino acid ABC transproter, permease protein [Moritella sp. PE36] gi|149804867|gb|EDM64904.1| amino acid ABC transproter, permease protein [Moritella sp. PE36] Length = 189 Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 51/152 (33%), Positives = 84/152 (55%), Gaps = 17/152 (11%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV-LIALKYQLHFDKP 249 VF+ ++ I L++ R F L +L+IS F G P LV L L Y L P Sbjct: 7 VFALIIAIGLAVV-----RTFKVPVLNQLAMLFISFFR--GTPLLVQLFLLYYGLPRVFP 59 Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309 +L + F + I L+ + AA+ AE +R+ ++AV + QMEAA+++G+T + Sbjct: 60 ILIHMD---------AFTASVIGLTLHFAAYKAESIRAAIMAVDKSQMEAALSIGMTTSQ 110 Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341 A R ++LPQA R P L + +++++K++SLA Sbjct: 111 AMRRIVLPQAARIATPSLMNYFIDMIKSTSLA 142 >gi|167766390|ref|ZP_02438443.1| hypothetical protein CLOSS21_00895 [Clostridium sp. SS2/1] gi|167711799|gb|EDS22378.1| hypothetical protein CLOSS21_00895 [Clostridium sp. SS2/1] gi|291560833|emb|CBL39633.1| amino acid ABC transporter membrane protein, PAAT family (TC 3.A.1.3.-) [butyrate-producing bacterium SSC/2] Length = 218 Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 44/129 (34%), Positives = 73/129 (56%), Gaps = 10/129 (7%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I S AA+ AEI RSG+ A+P+GQ EAA LG + ++LPQ ++ I P L S+ Sbjct: 94 IGFSLNYAAYFAEIYRSGIQAIPKGQYEAAKVLGFNRSQTFFKIILPQVVKIITPSLGSE 153 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 + L+K++SLA +G ++ V NQ ++ + IYL ++ + L MN + + Sbjct: 154 CMTLVKDTSLAHVIGVMEIYVVA---TNQMARSRGM------IYLVVAGIFYLIMNAIVS 204 Query: 391 KI-ALKEKK 398 K+ ++ EK+ Sbjct: 205 KVFSVIEKR 213 >gi|149376081|ref|ZP_01893847.1| ABC-type arginine transport system, permease component [Marinobacter algicola DG893] gi|149359718|gb|EDM48176.1| ABC-type arginine transport system, permease component [Marinobacter algicola DG893] Length = 234 Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 61/216 (28%), Positives = 97/216 (44%), Gaps = 30/216 (13%) Query: 192 FSFVLGIVLSLF--ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY---QLH- 245 FS L +VL L + +LS K+ A+ + T LI G+P LV++ L Y Q+ Sbjct: 24 FSLALALVLGLIGASAKLS-----KSRVAIGIATTYTTLIRGVPDLVMMLLFYYGGQVAV 78 Query: 246 ----------FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295 +D QF+ F+S I + A++AE R +AV G Sbjct: 79 NNLSDYLYDAYDIDFFFQFD---------PFISGVITIGLIFGAYMAETFRGAFLAVESG 129 Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355 Q+EAA A G + + ++LPQ +R +P + + + LLK ++L +G D+V V Sbjct: 130 QIEAARAYGFSRWRTFHRIILPQMLRHALPGIGNNWQVLLKTTALVSIIGLTDMVRVAEE 189 Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 + F+YLSL+ LF+ LN + Sbjct: 190 AAKAERMPFHFFIPVAFVYLSLTAGSELFIKWLNKR 225 >gi|119718791|ref|YP_925756.1| polar amino acid ABC transporter, inner membrane subunit [Nocardioides sp. JS614] gi|119539452|gb|ABL84069.1| amino acid ABC transporter membrane protein, PAAT family [Nocardioides sp. JS614] Length = 241 Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 42/130 (32%), Positives = 76/130 (58%), Gaps = 9/130 (6%) Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 AL A++AE++R+G+ +V Q+ +A ALGL+ +A R V+LPQ +R ++PPL + + Sbjct: 114 ALVLSYGAYVAEVIRAGIDSVHPSQVASAEALGLSRAQAMRFVVLPQGVRRVVPPLINDF 173 Query: 332 LNLLKNSSLAVAVG-FADLVSV---GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387 ++L K+++L AVG F L + G N T L+ +++L+I IA F + Sbjct: 174 VSLQKDTALVGAVGVFESLFAAQDYGNFNFNYTP-----YLVTAAFFVALTIPIARFTDW 228 Query: 388 LNAKIALKEK 397 + ++ +E+ Sbjct: 229 MGRRMMERER 238 >gi|331017120|gb|EGH97176.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 159 Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 52/155 (33%), Positives = 82/155 (52%), Gaps = 17/155 (10%) Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239 TLT++ A + +L I + + R SRH+ + ALP YI F G P LV + Sbjct: 18 TLTLELVAIAVIAGLILAIPMGI--ARASRHWPVR---ALPYAYI--FFFRGTPLLVQLF 70 Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295 L Y L QF+ + + P F + ++ +TAA+IAEI+R + AVP G Sbjct: 71 LVYY------GLAQFDAVRQGPLWPYLRDPFWCAVVTMTLHTAAYIAEILRGAIQAVPVG 124 Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 ++EAA ALG++ KA ++LP+A R +P +++ Sbjct: 125 EVEAARALGMSKWKALFYIVLPRAARIGLPAYSNE 159 >gi|330432866|gb|AEC17925.1| glutamine ABC transporter permease protein [Gallibacterium anatis UMN179] Length = 220 Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 55/209 (26%), Positives = 100/209 (47%), Gaps = 32/209 (15%) Query: 191 VFSFVLGIVLSLFATRLSRHFHE---KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247 +F ++GI ++ RL R+F + + + PLL + FGL A + LH + Sbjct: 35 IFGTLMGIAMTS-KNRLIRYFCQIYLEIVRVTPLLALLFVSYFGL------AKWFNLHLN 87 Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307 ++ F FI T A + ++VR + ++ R Q E+A+ALGL+ Sbjct: 88 SELVCIFVFIFWGT-----------------AEMGDLVRGAITSIDRHQSESALALGLSK 130 Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367 + R +LLP +++ +PP+ + + ++K SSLA+ +G +++ VG II + A+ Sbjct: 131 AQTFRYILLPLSVKRALPPVINLFTRMVKTSSLAMLIGTLEVIKVGQQIIETSLFAMPTA 190 Query: 368 LIW-----MFIYLSLSIMIALFMNRLNAK 391 W M +Y + ++ F RL K Sbjct: 191 SFWIYGLIMLMYFVICYPLSWFAGRLEKK 219 Score = 40.8 bits (94), Expect = 0.37, Method: Compositional matrix adjust. Identities = 20/61 (32%), Positives = 36/61 (59%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G T +++F + + I GTL+G S N+L+ + C++Y+E+ R P L ++F Sbjct: 15 LLEGLGLTIYISFVAIFFSAIFGTLMGIAMTSKNRLIRYFCQIYLEIVRVTPLLALLFVS 74 Query: 149 Y 149 Y Sbjct: 75 Y 75 >gi|307262089|ref|ZP_07543743.1| Amino acid ABC transporter, permease protein [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|306868268|gb|EFN00091.1| Amino acid ABC transporter, permease protein [Actinobacillus pleuropneumoniae serovar 12 str. 1096] Length = 238 Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 55/211 (26%), Positives = 108/211 (51%), Gaps = 25/211 (11%) Query: 193 SFVLGIVLS-----LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247 SF++G+ ++ + T ++ H + A+ +YIS +I G P LV I++ + + Sbjct: 42 SFIIGMAIAVGVALIRVTPVNGMLH-RIALAIVKVYIS--IIRGTPMLVQISVVF---YG 95 Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307 P +G + + P + I S A+ +E VR+ + +VP+GQ EA +G+T+ Sbjct: 96 LPAIGVY-------IDP-IPAAIIGFSLNIGAYGSETVRAAISSVPKGQWEAGYTIGMTY 147 Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI- 366 + R ++ PQA+R +PPL++ ++ L K++SLA V ++ V + N + + + Sbjct: 148 MQTFRRIIAPQAIRVAVPPLSNTFIGLFKDTSLASVVTVTEMFRVAQQMANMSYDFLPVY 207 Query: 367 ----ILIWMFIYLSLSIMIALFMNRLNAKIA 393 ++ W F ++ L ++ A R N +A Sbjct: 208 IEAGLIYWCFCWV-LFLIQAKLERRFNCFVA 237 >gi|284044553|ref|YP_003394893.1| polar amino acid ABC transporter inner membrane subunit [Conexibacter woesei DSM 14684] gi|283948774|gb|ADB51518.1| polar amino acid ABC transporter, inner membrane subunit [Conexibacter woesei DSM 14684] Length = 279 Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 50/169 (29%), Positives = 91/169 (53%), Gaps = 9/169 (5%) Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280 LL + T ++ G+PT++L+ Y + F P L + G P + AL +A+ Sbjct: 106 LLAVYTDVLRGIPTILLV---YLVGFGIPALA----LNGLPTDPVVLG-GAALVLTYSAY 157 Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340 +AE+ R+GL +V Q AA+A+GL +A R V+LPQA+R +IPPL + +++L K+ +L Sbjct: 158 VAEVYRAGLDSVHPSQRAAALAVGLNRVQALRFVVLPQAVRRVIPPLLNDFISLQKDVAL 217 Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 +G + V + +I +Y+ +++ +A F++R+ Sbjct: 218 ISVLGPLEAFRVAQIEASSNFNYTPLIAA-ALLYICVTVPLARFVDRMQ 265 >gi|116751319|ref|YP_848006.1| polar amino acid ABC transporter inner membrane subunit [Syntrophobacter fumaroxidans MPOB] gi|116700383|gb|ABK19571.1| polar amino acid ABC transporter, inner membrane subunit [Syntrophobacter fumaroxidans MPOB] Length = 222 Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 39/125 (31%), Positives = 76/125 (60%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I L ++A+ ++I R ++++P GQ++AA ALG++ KA V+LPQA+R IP +++ Sbjct: 94 IVLGSISSAYQSQIFRGAILSLPEGQLKAARALGMSDAKAVFFVILPQALRLSIPGWSNE 153 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 Y +LK+S++ A+G A++++ + +T Q + + + IYL L+ + L + Sbjct: 154 YSIVLKDSAVTYALGVAEIMARTHFVATRTYQHLPLYMAAGAIYLLLTYAGVKGLRLLES 213 Query: 391 KIALK 395 K+ +K Sbjct: 214 KVRIK 218 >gi|288905199|ref|YP_003430421.1| amino acid ABC transporter, permease protein [Streptococcus gallolyticus UCN34] gi|306831269|ref|ZP_07464429.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|325978173|ref|YP_004287889.1| polar amino acid ABC transporter membrane protein [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] gi|288731925|emb|CBI13490.1| Putative amino acid ABC transporter, permease protein [Streptococcus gallolyticus UCN34] gi|304426505|gb|EFM29617.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|325178101|emb|CBZ48145.1| polar amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] Length = 213 Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 32/91 (35%), Positives = 53/91 (58%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +A + AA+ AEI R G+ A+P+GQ EAA L L + ++LPQ + ++P + ++ Sbjct: 89 LAFTLNYAAYFAEIFRGGIAAIPKGQYEAAKVLKLNQLQTIHYIILPQVFKIVLPSVFNE 148 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361 +NL+K+SSL +G DL+ T N+ Sbjct: 149 IINLVKDSSLVYVLGVGDLLLASKTAANRDA 179 >gi|262038365|ref|ZP_06011742.1| amino acid ABC transporter, amino acid-binding/permease protein [Leptotrichia goodfellowii F0264] gi|261747583|gb|EEY35045.1| amino acid ABC transporter, amino acid-binding/permease protein [Leptotrichia goodfellowii F0264] Length = 523 Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 39/142 (27%), Positives = 78/142 (54%), Gaps = 6/142 (4%) Query: 256 FIGGSTV-----SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 F G S V SP +L+I +S T A++ EI+R G+ ++ +GQ EAA A+G+TH + Sbjct: 363 FYGSSQVLNWNLSPLGAALFI-VSINTGAYMCEIIRGGIDSIDKGQFEAAQAIGMTHFQM 421 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370 + ++ PQ R I+P + ++++ +K++S+ + +L V ++ + E+ +I Sbjct: 422 MKNIIFPQVFRIILPSIGNEFIINIKDTSVLSVISVTELFFVSKSVAGTYSKYYEVFIIT 481 Query: 371 MFIYLSLSIMIALFMNRLNAKI 392 IY L+ ++ + + K+ Sbjct: 482 CVIYFFLTFTLSALLKYVEKKM 503 >gi|225386717|ref|ZP_03756481.1| hypothetical protein CLOSTASPAR_00465 [Clostridium asparagiforme DSM 15981] gi|225047195|gb|EEG57441.1| hypothetical protein CLOSTASPAR_00465 [Clostridium asparagiforme DSM 15981] Length = 223 Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 33/105 (31%), Positives = 60/105 (57%) Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 A + +T A +AEI+R GL +P+GQ E+A + G + + ++LPQ +SIIP + SQ Sbjct: 94 ACTLFTTAVMAEIIRGGLNGIPKGQFESAASQGFSFFQTLFYIVLPQTYKSIIPAMLSQV 153 Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376 + ++K++S V A+ + ++ + II+++ FI L Sbjct: 154 ITVIKDTSFLKVVDIAEFMRNSYVVMGKLSAPAHIIMLYSFIALC 198 >gi|27378209|ref|NP_769738.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] gi|27351356|dbj|BAC48363.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] Length = 231 Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 65/208 (31%), Positives = 99/208 (47%), Gaps = 15/208 (7%) Query: 160 DHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKAL 219 D SIVL +L + GL F ++ A FV +LG L+L +HF + Sbjct: 5 DFSIVLQAWPYLWS-GLLF---SLALTAVAFVVGMILGTCLALL-----QHFEVPVIGKV 55 Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKP-VLGQFNFIGGSTVSPEFMSLYIALSCYTA 278 YI+ LI +P LI + + F P VLG + G + +I + A Sbjct: 56 VRGYIA--LIRSIP---LILVLFWFFFLVPIVLGHLSGNGRPIPIGATWTAFITFGLFEA 110 Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338 A+ +EI+R GL AV RGQ EA AL L+ + R V+LPQ +R P + SQ + L +++ Sbjct: 111 AYYSEIIRVGLRAVNRGQFEACQALALSTFETYRSVILPQVLRVASPIILSQTIILFQDT 170 Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEI 366 SL + DL+ + G+ +E+ Sbjct: 171 SLVYVLSLTDLLGAASKLAQLNGRLVEM 198 >gi|254250415|ref|ZP_04943734.1| ABC-type amino acid transport system, permease component [Burkholderia cenocepacia PC184] gi|124879549|gb|EAY66905.1| ABC-type amino acid transport system, permease component [Burkholderia cenocepacia PC184] Length = 244 Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 40/127 (31%), Positives = 74/127 (58%), Gaps = 1/127 (0%) Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316 +GG+ ++P F+ I +S + AF AE +R+GL AVPR +EAA +LG + R+ V L Sbjct: 103 LGGNPLTP-FIWSVIVISLHKGAFHAEALRAGLEAVPRATLEAAQSLGYSRRQRLWHVQL 161 Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376 P A+R +P L + ++L+K +++A A+ D+ I Q +E++++ + + + Sbjct: 162 PLAVRFALPALVNNLVDLVKMTTVASAIAVGDVTYASIMIWTQRDNVLELMILILLFFGA 221 Query: 377 LSIMIAL 383 L+ + L Sbjct: 222 LTFTVNL 228 >gi|119356996|ref|YP_911640.1| polar amino acid ABC transporter, inner membrane subunit [Chlorobium phaeobacteroides DSM 266] gi|119354345|gb|ABL65216.1| amino acid ABC transporter membrane protein, PAAT family [Chlorobium phaeobacteroides DSM 266] Length = 340 Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 59/218 (27%), Positives = 105/218 (48%), Gaps = 19/218 (8%) Query: 183 MDTNAKIFVFSFVLGIVLSLFAT--RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240 + T I VFS VLG L R+SR+ + + YIS ++ G P LV + L Sbjct: 134 LKTTVIISVFSTVLGTFLGAMICFMRMSRN---RLLSVIAKSYIS--ILRGTPVLVFLML 188 Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300 + + F ++P +S+ IA AA++AEI R+G+ ++ +GQ EA Sbjct: 189 MFYVVF-----------ASVDINPVIVSV-IAFGMNFAAYVAEIYRAGINSIDKGQAEAG 236 Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 IA+G T ++LPQ + I+P ++++L+K +S+ + DL I ++T Sbjct: 237 IAMGFTKVNTFLFIILPQTVLRILPVYKGEFISLVKMTSVVGYIAVQDLTKASDIIRSRT 296 Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 A +++ +Y +S ++ LF+ + K K+ Sbjct: 297 FDAFFPLVMVAILYFCISWVLMLFLEYVERLADPKSKR 334 >gi|261407769|ref|YP_003244010.1| polar amino acid ABC transporter inner membrane subunit [Paenibacillus sp. Y412MC10] gi|261284232|gb|ACX66203.1| polar amino acid ABC transporter, inner membrane subunit [Paenibacillus sp. Y412MC10] Length = 219 Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 37/111 (33%), Positives = 64/111 (57%), Gaps = 6/111 (5%) Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308 PV+G++ V F++ +A AA+ AEI R GL+A+ +GQ EA+ LGL Sbjct: 80 PVIGEY------LVLDRFVAACLAFVLNYAAYFAEIFRGGLLAIDKGQYEASKVLGLNRW 133 Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359 + T V+LPQ R +P ++++ + L+K+++L AV +L+ T +N+ Sbjct: 134 QTTTKVILPQMFRVALPAVSNESITLVKDTALLYAVAVPELLHFAYTAVNR 184 >gi|77460511|ref|YP_350018.1| amino acid ABC transporter permease [Pseudomonas fluorescens Pf0-1] gi|77384514|gb|ABA76027.1| L-arginine ABC transporter membrane protein / L-ornithine ABC transporter membrane protein [Pseudomonas fluorescens Pf0-1] Length = 232 Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 51/167 (30%), Positives = 85/167 (50%), Gaps = 11/167 (6%) Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL----YIALSCYTA 278 ++ T++I G P LV + L Y L QF + S + P S +A + T+ Sbjct: 56 WLYTYVIRGTPMLVQLFLIYY------GLAQFEAVRESFLWPWLSSATFCACLAFAINTS 109 Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338 A+ AEI+ L A P G++EAA A+G++ K + +LLP A+R +P +++ + +L+ + Sbjct: 110 AYTAEIIAGSLKATPNGEIEAAKAMGMSRVKMYKRILLPSALRRALPQYSNEVIMMLQTT 169 Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS-IMIALF 384 SLA V D+ T+ Q E + YL L+ I++ LF Sbjct: 170 SLASIVTLIDITGAARTVNAQFYLPFEAYITAGVFYLCLTFILVRLF 216 >gi|227819411|ref|YP_002823382.1| ABC transporter permease [Sinorhizobium fredii NGR234] gi|227338410|gb|ACP22629.1| putative permease component of ABC transporter [Sinorhizobium fredii NGR234] Length = 219 Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 60/215 (27%), Positives = 103/215 (47%), Gaps = 20/215 (9%) Query: 183 MDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY 242 + + I + S V+G VL +F L+ + + K L Y T I G P LVL+ Y Sbjct: 20 LGVSISISLLSIVVGTVLGVFVG-LALTYGYRPVKWLVRGY--TDFIRGTPVLVLVLASY 76 Query: 243 QLHFDKPVLGQFNFIGGSTVSPE---FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299 + STV + F + +AL+ + ++ + E+VR L ++P+GQ EA Sbjct: 77 YVL--------------STVGIDLGPFQAGILALAVFCSSHVGELVRGALQSIPKGQTEA 122 Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359 A A+GLT + VL PQA+R +P + ++K S+L +G +L+ +I++ Sbjct: 123 AKAIGLTFPQTFAYVLGPQALRQALPAWVNTAAEMVKASTLLSIIGVGELLLRTQEVISR 182 Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394 T ++E F+Y ++ I F + K A+ Sbjct: 183 TFMSLEFYFFAGFLYFVINYGIERFGRYVERKTAV 217 >gi|332041715|gb|EGI78067.1| polar amino acid ABC transporter inner membrane subunit [Hylemonella gracilis ATCC 19624] Length = 222 Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 43/131 (32%), Positives = 77/131 (58%), Gaps = 8/131 (6%) Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327 S I + AA+ +EI+R+G+ ++PRGQ+ A A+G+++ + + V+LPQA R+++P L Sbjct: 94 SAVITFIAFEAAYFSEIMRAGIQSIPRGQVFAGYAMGMSYAQNMKFVILPQAFRNMLPVL 153 Query: 328 TSQYLNLLKNSSLAVAVGFADLV---SVGGTIINQTGQA-IEIILIWMFIYLSLSIMIAL 383 +Q + L +++SL + DL+ +V G ++ +A I L++ I SLS + Sbjct: 154 MTQTIILFQDTSLVYIITAHDLLHGFTVAGNNLSHPREAYILAALLYFVICYSLSNAV-- 211 Query: 384 FMNRLNAKIAL 394 RL KIA+ Sbjct: 212 --KRLQQKIAI 220 >gi|227833321|ref|YP_002835028.1| glutamate ABC transport system, permease protein [Corynebacterium aurimucosum ATCC 700975] gi|262184305|ref|ZP_06043726.1| glutamate ABC transport system, permease protein [Corynebacterium aurimucosum ATCC 700975] gi|227454337|gb|ACP33090.1| glutamate ABC transport system, permease protein [Corynebacterium aurimucosum ATCC 700975] Length = 228 Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 41/122 (33%), Positives = 74/122 (60%), Gaps = 1/122 (0%) Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335 YT+AF+AE +RSG+ V GQ EAA +LGL+ + ++ PQA+R+ I PL + + L Sbjct: 107 YTSAFVAESLRSGINTVDFGQAEAARSLGLSFSQTFSTIIFPQAVRAAIVPLGNTLIALT 166 Query: 336 KNSSLAVAVGFADL-VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394 KN+++A A+G A+ + + TI Q I I+ ++ L++ + + + +L+ +A+ Sbjct: 167 KNTTIASAIGVAEASLLMKSTIEMHASQLFLIFFIFAAGFIILTLPMGVGLGKLSETLAV 226 Query: 395 KE 396 K+ Sbjct: 227 KK 228 Score = 37.0 bits (84), Expect = 5.2, Method: Compositional matrix adjust. Identities = 25/74 (33%), Positives = 38/74 (51%), Gaps = 8/74 (10%) Query: 96 TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF----LYKS 151 TFW A I A ++GT++ A R+S ++ WI Y+ RN P ++I F LY++ Sbjct: 23 TFWSA----IGAMLLGTILTAMRVSPVGILRWIATTYITTVRNTPLTLIILFCSFGLYQN 78 Query: 152 VLSVLPIPDHSIVL 165 + L D S L Sbjct: 79 LGLTLASKDSSTFL 92 >gi|116248749|ref|YP_764590.1| putative permease component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] gi|115253399|emb|CAK11787.1| putative permease component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] Length = 219 Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 52/169 (30%), Positives = 85/169 (50%), Gaps = 11/169 (6%) Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285 T +I G P LVL+ Y + V G + P F + +AL+ + ++ + EIV Sbjct: 60 TDIIRGTPVLVLVLASY--YVSAAV--------GLDLGP-FSAGVLALAIFCSSHVGEIV 108 Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345 R L A+P+GQ EAA A+GLT + VL PQAMR +P + ++K S+L +G Sbjct: 109 RGALQAIPKGQTEAAKAIGLTFTQTFTSVLWPQAMRQCLPAWVNTAAEMVKASTLLSVIG 168 Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394 A+L+ II++ +++ + +Y ++ I F + K AL Sbjct: 169 VAELLLRTQEIISRNFMSLQFYFLAGGLYFIINYGIEHFGKYVERKTAL 217 >gi|295699403|ref|YP_003607296.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia sp. CCGE1002] gi|295438616|gb|ADG17785.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. CCGE1002] Length = 218 Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 38/140 (27%), Positives = 73/140 (52%), Gaps = 1/140 (0%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G VSP + + + L+ YT+A++ +I R + AVPRGQ A +LG+T + R ++ PQ Sbjct: 80 GIDVSP-WAAATVTLTLYTSAYLVDIWRGCVEAVPRGQWAAGASLGMTFGQQLRYIVWPQ 138 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378 A++ + P + ++K+++LA +GF +L G I N + I + IY ++ Sbjct: 139 ALKIAVAPTVGFLVQVVKSTALASIIGFIELTKTGTMITNAAFRPFPIYGMVAMIYFAMC 198 Query: 379 IMIALFMNRLNAKIALKEKK 398 + + L + + + + Sbjct: 199 FPLTWYARVLEKRQKVGQHR 218 >gi|146338610|ref|YP_001203658.1| ABC transporter permease/ATP-binding protein [Bradyrhizobium sp. ORS278] gi|146191416|emb|CAL75421.1| Putative ABC transporter (ATP-binding/permease protein) [Bradyrhizobium sp. ORS278] Length = 542 Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 39/111 (35%), Positives = 62/111 (55%) Query: 275 CYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNL 334 C A FIAE++RSG++ V RGQ+ A ALG+T R ++ PQA+R++IP ++ ++ Sbjct: 95 CNEAPFIAEMLRSGVLGVDRGQLLAGQALGMTPGVLMRRIIAPQAIRTMIPAFGNEAVSA 154 Query: 335 LKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 LKNSSLA + +L + + T I +YL L+ I++ Sbjct: 155 LKNSSLASVIAVQELTLRSTQLASSTFDFFSIFFASGLLYLGLTGAISVIQ 205 >gi|116252500|ref|YP_768338.1| transmembrane permease component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] gi|115257148|emb|CAK08243.1| putative transmembrane permease component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] Length = 268 Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 54/191 (28%), Positives = 96/191 (50%), Gaps = 18/191 (9%) Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240 L + + + + +G+ + F L + EK + +Y + F GLP L+ + Sbjct: 51 LGLQVTVSVAIVTLPIGLAIG-FLVALGQQSEEKPLRLAAGIYTTIFR--GLPELLTL-- 105 Query: 241 KYQLHFDKPVLGQ--FNFIGGSTVSPE---FMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295 + +++ +L Q F+G E F++ IALS +A+ +E++ S A+P+G Sbjct: 106 -FIIYYGMQMLIQSLLTFVGYDGPPIEINAFLAGVIALSVVFSAYCSEVLLSAFHAIPKG 164 Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355 Q EA ALGL + RL++LPQ +R +P LT+ ++ LLK++S + AD Sbjct: 165 QYEAGDALGLHRGRTLRLIILPQLVRIALPGLTNLWMVLLKDTSYVSIISLAD------- 217 Query: 356 IINQTGQAIEI 366 I+ QT A+ + Sbjct: 218 ILRQTSVAVRV 228 >gi|153952019|ref|YP_001398496.1| His/Glu/Gln/Arg/opine ABC transporter permease [Campylobacter jejuni subsp. doylei 269.97] gi|152939465|gb|ABS44206.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Campylobacter jejuni subsp. doylei 269.97] Length = 233 Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 54/209 (25%), Positives = 106/209 (50%), Gaps = 18/209 (8%) Query: 191 VFSFVLG---IVLSLFATRLSRHFHE---KTGKALPLLYISTFLIFGLPTLVLIALKYQL 244 +FS ++G I++S F ++ + + + + PLL FL + LP K+ + Sbjct: 29 IFSLIIGLFCILMSYFKIKILENICKLYIEFSRNTPLLIQLFFLYYALP-------KFNI 81 Query: 245 HFDK-PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 H ++ P L T+ P F + LS +++AE +R+G A+ + Q EA ++L Sbjct: 82 HLEQIPPLSLICLSVEETLIPSFACAIVGLSFLGGSYMAESLRAGFEAIRKHQFEAGLSL 141 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363 G + R V+LPQA+ +P +++ + L+K +S+ + DLV++ ++ + T + Sbjct: 142 GFSKFGNLRYVILPQALAISMPSISANIIFLIKETSVVSIIALPDLVNLMKSLNSLTYKT 201 Query: 364 IEIILI----WMFIYLSLSIMIALFMNRL 388 E++ + ++ I L LS ++ F RL Sbjct: 202 DELLFLLFMGYLCIILPLSFILLKFEKRL 230 Score = 38.1 bits (87), Expect = 2.7, Method: Compositional matrix adjust. Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 4/75 (5%) Query: 82 DSSYATAILVGFVNTFWL----AFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137 D + A F+ WL +F G+I + IIG K++ IC++Y+E R Sbjct: 2 DFDFILAQAPAFLTAAWLTIKLSFFGIIFSLIIGLFCILMSYFKIKILENICKLYIEFSR 61 Query: 138 NIPPLVVIFFLYKSV 152 N P L+ +FFLY ++ Sbjct: 62 NTPLLIQLFFLYYAL 76 >gi|326789760|ref|YP_004307581.1| polar amino acid ABC transporter inner membrane protein [Clostridium lentocellum DSM 5427] gi|326540524|gb|ADZ82383.1| polar amino acid ABC transporter, inner membrane subunit [Clostridium lentocellum DSM 5427] Length = 256 Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 29/68 (42%), Positives = 50/68 (73%) Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 +S T A++AEIVR G+I+V +GQ EAA A+G+ H + R V+LPQ +R+I+P ++++ Sbjct: 108 VSINTGAYMAEIVRGGIISVDKGQFEAAQAIGMNHLQTMRHVVLPQVIRNILPATGNEFV 167 Query: 333 NLLKNSSL 340 +K++S+ Sbjct: 168 INIKDTSV 175 >gi|260461849|ref|ZP_05810095.1| polar amino acid ABC transporter, inner membrane subunit [Mesorhizobium opportunistum WSM2075] gi|319785374|ref|YP_004144850.1| polar amino acid ABC transporter inner membrane subunit [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|259032490|gb|EEW33755.1| polar amino acid ABC transporter, inner membrane subunit [Mesorhizobium opportunistum WSM2075] gi|317171262|gb|ADV14800.1| polar amino acid ABC transporter, inner membrane subunit [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 253 Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 31/78 (39%), Positives = 54/78 (69%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +A+S A+++AE++R+GL +V +GQ EAA + GL + ++ + ++LPQA+ +++P L SQ Sbjct: 127 VAMSIIAASYLAEVIRAGLYSVDKGQWEAAASTGLNNWQSFKWIILPQAISNMMPALLSQ 186 Query: 331 YLNLLKNSSLAVAVGFAD 348 + L K +SL VG D Sbjct: 187 VIMLFKTTSLVSMVGVID 204 >gi|209547537|ref|YP_002279455.1| polar amino acid ABC transporter inner membrane protein [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209538781|gb|ACI58715.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 219 Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 52/169 (30%), Positives = 85/169 (50%), Gaps = 11/169 (6%) Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285 T +I G P LVL+ Y + V G + P F + +AL+ + ++ + EIV Sbjct: 60 TDIIRGTPVLVLVLASY--YVSAAV--------GLDLGP-FSAGVLALAIFCSSHVGEIV 108 Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345 R L A+P+GQ EAA A+GLT + VL PQAMR +P + ++K S+L +G Sbjct: 109 RGALQAIPKGQTEAAKAIGLTFTQTFTSVLWPQAMRQCLPAWVNTAAEMVKASTLLSVIG 168 Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394 A+L+ II++ +++ + +Y ++ I F + K AL Sbjct: 169 VAELLLRTQEIISRNFMSLQFYFLAGGLYFIVNYGIEHFGKYVERKTAL 217 >gi|15618116|ref|NP_224401.1| amino acid ABC transporter ATPase [Chlamydophila pneumoniae CWL029] gi|16752848|ref|NP_445118.1| amino acid ABC transporter, permease protein [Chlamydophila pneumoniae AR39] gi|33241530|ref|NP_876471.1| ABC amino acid transporter permease [Chlamydophila pneumoniae TW-183] gi|4376462|gb|AAD18345.1| ABC Amino Acid Transporter Permease [Chlamydophila pneumoniae CWL029] gi|7189487|gb|AAF38393.1| amino acid ABC transporter, permease protein [Chlamydophila pneumoniae AR39] gi|33236038|gb|AAP98128.1| ABC amino acid transporter permease [Chlamydophila pneumoniae TW-183] Length = 217 Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 38/121 (31%), Positives = 74/121 (61%), Gaps = 1/121 (0%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IALS +AA++AE +R G+ ++ GQ E+A+ LG + ++ PQ ++I+P LT++ Sbjct: 92 IALSMNSAAYLAENIRGGINSLSIGQWESAMVLGYKKYQIFVYIIYPQVFKNILPSLTNE 151 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 +++L+K SS+ + VG +L V I+++ +E+ LI +Y ++ + ++RL+ Sbjct: 152 FVSLIKESSILMVVGVPELTKVTKDIVSRELNPMEMYLICAGLYFLMTTSFSC-ISRLSE 210 Query: 391 K 391 K Sbjct: 211 K 211 >gi|27379575|ref|NP_771104.1| ABC transporter permease ATP-binding protein [Bradyrhizobium japonicum USDA 110] gi|27352727|dbj|BAC49729.1| blr4464 [Bradyrhizobium japonicum USDA 110] Length = 540 Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 40/111 (36%), Positives = 62/111 (55%) Query: 275 CYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNL 334 C A FIAE++R+G++ V RGQ+ A ALG+T R V+ PQA+R++IP ++ ++ Sbjct: 95 CNEAPFIAEMLRAGVLGVDRGQVTAGQALGMTPRILMWRVIAPQAIRTMIPAFGNEAVSA 154 Query: 335 LKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 LKNSSLA V +L + + T I +YL L+ I++ Sbjct: 155 LKNSSLASVVAVQELTLRSTQLASSTFDFFSIFFASGLLYLVLTATISVIQ 205 >gi|222823696|ref|YP_002575270.1| ABC transporter, His/Glu/Gln/Arg/opine family (permease protein) [Campylobacter lari RM2100] gi|222538918|gb|ACM64019.1| conserved hypothetical protein, ABC transporter, His/Glu/Gln/Arg/opine family (permease protein) [Campylobacter lari RM2100] Length = 215 Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 36/122 (29%), Positives = 72/122 (59%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I LS +++AE +R+G+ AV + Q E+ ++LGL+ + R +++PQA+ +P +++ Sbjct: 91 IGLSFLGGSYMAESLRAGMEAVKKQQYESGLSLGLSKWQNFRYIIMPQALGIAMPSISAN 150 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 + LLK +S+ + ADLV V +I ++ E + + YL L + ++L +NR+ Sbjct: 151 IIFLLKETSVVSIIALADLVYVAKDLIGLYYKSNEALFALVLCYLILILPLSLVLNRIEK 210 Query: 391 KI 392 ++ Sbjct: 211 RL 212 >gi|259502845|ref|ZP_05745747.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus antri DSM 16041] gi|312870480|ref|ZP_07730600.1| arginine ABC transporter, permease protein ArtQ [Lactobacillus oris PB013-T2-3] gi|259169212|gb|EEW53707.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus antri DSM 16041] gi|311094037|gb|EFQ52361.1| arginine ABC transporter, permease protein ArtQ [Lactobacillus oris PB013-T2-3] Length = 213 Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 30/76 (39%), Positives = 49/76 (64%) Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 AA+ AEI R G A+ GQ EAA L L++ + R +++PQ ++ +IP + ++ +NL+K+ Sbjct: 96 AAYFAEIFRGGFQAIDEGQFEAARVLRLSYWQTLRKIVIPQVVKIVIPSIGNEVINLVKD 155 Query: 338 SSLAVAVGFADLVSVG 353 SSL +G DL+ G Sbjct: 156 SSLVYVIGLGDLLRAG 171 >gi|153855979|ref|ZP_01996920.1| hypothetical protein DORLON_02945 [Dorea longicatena DSM 13814] gi|149751779|gb|EDM61710.1| hypothetical protein DORLON_02945 [Dorea longicatena DSM 13814] Length = 220 Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 38/123 (30%), Positives = 68/123 (55%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + +S AF++E +R L++V GQ EAA +LG+T+ + +++PQA+R +PPL + Sbjct: 95 VVMSFNMGAFMSESIRGALLSVDEGQKEAAYSLGMTNFQLVTRIVIPQAVRVALPPLFND 154 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 +NL+K +SLA +G D++ +T + EI M +Y + ++ + L Sbjct: 155 IINLIKMTSLAFMLGVPDIMGAAKIEGARTFRYFEIYAAVMLVYWLIIFVLGILHKLLEK 214 Query: 391 KIA 393 K A Sbjct: 215 KCA 217 >gi|52424276|ref|YP_087413.1| arginine transporter permease subunit ArtQ [Mannheimia succiniciproducens MBEL55E] gi|52306328|gb|AAU36828.1| ArtM protein [Mannheimia succiniciproducens MBEL55E] Length = 223 Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 48/172 (27%), Positives = 87/172 (50%), Gaps = 8/172 (4%) Query: 228 LIFGLPTLVLIALKY--QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285 L+ GLP ++++ L Y + + G++ SP F+ IAL+ AA+ ++ + Sbjct: 55 LLRGLPEILVVLLIYFGSTELVEKLTGEY-----IEFSP-FLCGVIALAIIFAAYASQTL 108 Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345 R + A+P GQ E+ ALGL+ ++LPQ R +P L++Q+L LLK+++L +G Sbjct: 109 RGAIQAIPLGQWESGAALGLSRGYTFVNIILPQVWRHALPGLSNQWLVLLKDTALVSLIG 168 Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 DL+ + T Q +YL ++++ FM +L + E+ Sbjct: 169 VDDLMRQASLVNTNTHQPFTWYSFAALLYLIITLVSQFFMRKLEMRFTRFER 220 >gi|227873127|ref|ZP_03991419.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Oribacterium sinus F0268] gi|227841021|gb|EEJ51359.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Oribacterium sinus F0268] Length = 216 Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 35/126 (27%), Positives = 72/126 (57%), Gaps = 1/126 (0%) Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327 ++YI AA+ AEI RSG+ ++ RGQ EAA LG + + ++LPQ + I+P + Sbjct: 89 AVYIGFILNYAAYFAEIYRSGIQSMDRGQYEAAEILGYSKMQCFFRIILPQVWKKILPSI 148 Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387 T++ ++L+K++SLA ++ ++ + + + +I+ + Y+ + ++A M + Sbjct: 149 TNEVISLVKDTSLAFSISVMEMFTQAKALSSSQSSMFPLIMAGVLYYI-FNFVVAFIMEQ 207 Query: 388 LNAKIA 393 + K+A Sbjct: 208 MEKKMA 213 >gi|213417551|ref|ZP_03350693.1| arginine transporter permease subunit ArtQ [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 177 Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 43/137 (31%), Positives = 75/137 (54%), Gaps = 1/137 (0%) Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321 VSP F+ IALS AA+ ++ +R L AVP GQ E+ ALGL+ +++PQ R Sbjct: 40 VSP-FLCGVIALSLLYAAYASQTLRGALKAVPSGQWESGQALGLSKTAIFFRLVMPQMWR 98 Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 +P L +Q+L LLK+++L + DL+ +I +T + +I IYL ++++ Sbjct: 99 HALPGLGNQWLVLLKDTALVSLISVNDLMLQTKSIATRTQEPFNWYIIAAAIYLVITLIS 158 Query: 382 ALFMNRLNAKIALKEKK 398 + R++ + E++ Sbjct: 159 QYILKRIDLRATRFERR 175 >gi|329944506|ref|ZP_08292671.1| ABC transporter, permease protein [Actinomyces sp. oral taxon 170 str. F0386] gi|328530271|gb|EGF57150.1| ABC transporter, permease protein [Actinomyces sp. oral taxon 170 str. F0386] Length = 218 Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 38/89 (42%), Positives = 56/89 (62%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P F S+ +AL ++ F+ E VRSG+ +V +GQ+EAA ALG+ R ++LPQA+ Sbjct: 82 PLFWSVIVALIFSSSGFVCETVRSGINSVSKGQIEAARALGMPFGLIIRGIVLPQALART 141 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSV 352 I PL + ++ L SSLA AVG +L +V Sbjct: 142 IQPLVNIFIACLIGSSLAAAVGVVELTAV 170 >gi|242241097|ref|YP_002989278.1| polar amino acid ABC transporter inner membrane subunit [Dickeya dadantii Ech703] gi|242133154|gb|ACS87456.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya dadantii Ech703] Length = 221 Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 51/199 (25%), Positives = 97/199 (48%), Gaps = 14/199 (7%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 + SF+LG+ + + L R + K K Y+ ++I G P LV + L + Sbjct: 28 ILSFILGLAVGVIVALL-RLYGPKPLKWFCDFYV--WVIRGTPLLVQLFLIF-------- 76 Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 + F + I + A+ +EIVR +++VP+GQ AA +LG+ +A Sbjct: 77 ---YGLPNAGITLDAFPAALIGFTLNVGAYTSEIVRGAILSVPKGQWNAAYSLGMNGAQA 133 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370 R V++PQ++ +PPL++ +++L+K++SLA + ++ I++ T + + + + Sbjct: 134 IRWVIVPQSVFVSLPPLSNTFISLIKDTSLAAVITVPEMFLAAQRIVSVTYEPLILYVEA 193 Query: 371 MFIYLSLSIMIALFMNRLN 389 IYL S + RL Sbjct: 194 ALIYLLFSTFLGKIQVRLE 212 >gi|210615936|ref|ZP_03290859.1| hypothetical protein CLONEX_03078 [Clostridium nexile DSM 1787] gi|210150029|gb|EEA81038.1| hypothetical protein CLONEX_03078 [Clostridium nexile DSM 1787] Length = 216 Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 57/210 (27%), Positives = 110/210 (52%), Gaps = 23/210 (10%) Query: 189 IFVFSFVL----GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244 IF F+ +L GIV+S R+S++ +T + +YIS ++ G P ++ + Y Sbjct: 20 IFAFTLILSLPLGIVVSF--GRMSKNVVIRT---IVKVYIS--IMRGTPLILQLMFIY-- 70 Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALS--CYTAAFIAEIVRSGLIAVPRGQMEAAIA 302 G++ ++ ++PE+M+ + L AA+ AEI R G+ ++P GQ EAA Sbjct: 71 ------FGRY-YVLKMQMTPEWMNTAVILGFVLNYAAYFAEIYRGGIESMPIGQYEAAEI 123 Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362 LG T + ++ PQ M+ I+P +T++ + L+K++S+A + ++ +V I Sbjct: 124 LGYTKVQTFVKIIFPQVMKRILPSITNEVITLVKDTSIAYVLSVQEMFTVAKAISASQAS 183 Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 +I+ +F Y+ + ++A M R+ K+ Sbjct: 184 VSPLIIAAVFYYV-FNFIVAFVMERIEKKM 212 Score = 38.1 bits (87), Expect = 2.2, Method: Compositional matrix adjust. Identities = 17/58 (29%), Positives = 34/58 (58%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 G + +FW+ +I + +G +V GR+S N ++ I +VY+ + R P ++ + F+Y Sbjct: 13 GMIKSFWIFAFTLILSLPLGIVVSFGRMSKNVVIRTIVKVYISIMRGTPLILQLMFIY 70 >gi|312864828|ref|ZP_07725059.1| putative arginine ABC transporter, permease protein ArtQ [Streptococcus downei F0415] gi|311099955|gb|EFQ58168.1| putative arginine ABC transporter, permease protein ArtQ [Streptococcus downei F0415] Length = 213 Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 39/121 (32%), Positives = 68/121 (56%), Gaps = 1/121 (0%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +A + AA+ AEI R G+ A+P+GQ EAA L + R ++LPQ ++ ++P + ++ Sbjct: 89 LAFTLNYAAYFAEIFRGGIDAIPKGQYEAAKVLKFNQIQTIRYIILPQVVKIVLPSVFNE 148 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 +NL+K+SSL +G DL+ T N+ ++ + + IYL L ++ L R+ Sbjct: 149 VINLVKDSSLVYVLGVGDLLLESRTASNRDA-SLAPMFVAGAIYLFLVGVVTLASKRIEK 207 Query: 391 K 391 K Sbjct: 208 K 208 >gi|227894181|ref|ZP_04011986.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus ultunensis DSM 16047] gi|227864011|gb|EEJ71432.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus ultunensis DSM 16047] Length = 168 Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 37/129 (28%), Positives = 68/129 (52%), Gaps = 1/129 (0%) Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321 V P + + A AA+ AEI R G ++ GQ EAA L L + +++PQ ++ Sbjct: 35 VFPRYQAALFAFVLNYAAYFAEIFRGGFQSIDEGQFEAAKVLRLNRWQTMTKIIIPQVIK 94 Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 ++P + ++ +NL+K+SSL +G DL+ G + + + ++L+ + IYL L + Sbjct: 95 IVLPSIGNEVINLVKDSSLVYVIGLGDLLRAGNVAMARDVTLVPLVLVGV-IYLILISVC 153 Query: 382 ALFMNRLNA 390 A + +L Sbjct: 154 AFILKKLEG 162 >gi|164686605|ref|ZP_02210633.1| hypothetical protein CLOBAR_00197 [Clostridium bartlettii DSM 16795] gi|164604334|gb|EDQ97799.1| hypothetical protein CLOBAR_00197 [Clostridium bartlettii DSM 16795] Length = 252 Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 32/91 (35%), Positives = 60/91 (65%), Gaps = 1/91 (1%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G + F +++I +S T A++AEIVR G+I++ +GQ EAA A+G+ H + V+LPQ Sbjct: 95 GIDMDRTFAAIFI-VSINTGAYMAEIVRGGIISIDKGQFEAAQAIGMNHIQTMINVVLPQ 153 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349 +R+I+P ++++ +K++S+ +G +L Sbjct: 154 VIRNILPATGNEFVINIKDTSVLNVIGVTEL 184 >gi|86357910|ref|YP_469802.1| amino acid ABC transporter permease [Rhizobium etli CFN 42] gi|86282012|gb|ABC91075.1| probable amino acid ABC transporter, permease protein [Rhizobium etli CFN 42] Length = 222 Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 41/115 (35%), Positives = 66/115 (57%), Gaps = 1/115 (0%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IAL A+ EI+R G+ +V +GQ+EA ALGL RL++L A+R+I P LTSQ Sbjct: 95 IALGINGGAYAIEIIRGGVESVNKGQVEAGFALGLHKADVFRLIVLKPALRAIYPSLTSQ 154 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL-SIMIALF 384 ++ L +S+ ++ +L S I + T ++ E+ IYL + S+M+ +F Sbjct: 155 FVMLTLTTSVCTSIAAYELTSAAQRIESDTFRSFEVYFSVTAIYLVISSLMMGIF 209 Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust. Identities = 29/58 (50%), Positives = 34/58 (58%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 G + T LA +GMI A IG L A R S NKLV +VE+ RN P LV IFF+Y Sbjct: 20 GSLGTLGLAVAGMILALAIGILGVAARTSKNKLVQSPVIAFVEIVRNTPFLVQIFFIY 77 >gi|325576796|ref|ZP_08147411.1| arginine ABC superfamily ATP binding cassette transporter, membrane protein [Haemophilus parainfluenzae ATCC 33392] gi|325161002|gb|EGC73120.1| arginine ABC superfamily ATP binding cassette transporter, membrane protein [Haemophilus parainfluenzae ATCC 33392] Length = 219 Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 47/154 (30%), Positives = 85/154 (55%), Gaps = 5/154 (3%) Query: 243 QLHFDKPVLGQ--FNFIGGSTVSPE---FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQM 297 +L + P+L Q F + G S + + F I L+ +++AE +R GL AV +GQ+ Sbjct: 58 ELSRNTPLLIQVFFLYFGLSKIGLKLDGFTCGIIGLAFLGGSYMAEAIRGGLEAVSKGQI 117 Query: 298 EAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII 357 E+A+++GLT +A R V+ PQA P + + L L+K +S+ AV A+L+ V +I Sbjct: 118 ESALSIGLTPFQAFRYVIFPQAFAIATPAIGANCLFLMKETSVISAVAVAELMFVAKEVI 177 Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 + E + + + YL + + ++LF++ L + Sbjct: 178 GLDYKTNEALFLLVVFYLIILLPMSLFISYLERR 211 Score = 38.1 bits (87), Expect = 2.4, Method: Compositional matrix adjust. Identities = 19/54 (35%), Positives = 31/54 (57%) Query: 96 TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 T LAF G++ + +IG + K + W+ + Y+E+ RN P L+ +FFLY Sbjct: 20 TLHLAFWGILLSLVIGVICAVITTYKVKSLTWLVKGYIELSRNTPLLIQVFFLY 73 >gi|24636877|sp|Q8RQL5|GLUC_COREF RecName: Full=Glutamate transport system permease protein gluC gi|20126699|dbj|BAB88900.1| gluC [Corynebacterium efficiens] Length = 228 Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 44/123 (35%), Positives = 73/123 (59%), Gaps = 3/123 (2%) Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335 YT+AF+AE +RSG+ V GQ EAA +LGL R ++ PQA+R+ I PL + + L Sbjct: 107 YTSAFVAESLRSGINTVHFGQAEAARSLGLGFSDIFRSIIFPQAVRAAIIPLGNTLIALT 166 Query: 336 KNSSLA--VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393 KN+++A + VG A L+ + TI N + I+ ++ L++ + L + +L K+A Sbjct: 167 KNTTIASVIGVGEASLL-MKSTIENHANMLFVVFAIFAVGFMILTLPMGLGLGKLAEKMA 225 Query: 394 LKE 396 +K+ Sbjct: 226 VKK 228 >gi|312963773|ref|ZP_07778244.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Pseudomonas fluorescens WH6] gi|311281808|gb|EFQ60418.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Pseudomonas fluorescens WH6] Length = 222 Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 47/179 (26%), Positives = 87/179 (48%), Gaps = 24/179 (13%) Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279 P L F+ FGLP+L L ++Q +++ I L Y+ Sbjct: 68 PFLVQLFFIFFGLPSLGLKITEWQ--------------------AAVLAMVINLGAYS-- 105 Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339 EI+R+G+ A+PRGQ+EAA AL +T +A R V+L A+ + P L+SQ + ++ S+ Sbjct: 106 --TEIIRAGIQAIPRGQLEAAAALAMTRFEAFRHVVLLPALGKVWPALSSQIIIVMLGSA 163 Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 + + +L I ++ +A E + +YL +++MI +N + + ++ + Sbjct: 164 VCSQIATEELSFAANFIQSRNFRAFETYALTTLVYLCMALMIRQLLNWIGRRFVMRNSR 222 >gi|261866998|ref|YP_003254920.1| glutamine-binding periplasmic protein/glutamine transport system permease [Aggregatibacter actinomycetemcomitans D11S-1] gi|261412330|gb|ACX81701.1| glutamine-binding periplasmic protein/glutamine transport system permease protein [Aggregatibacter actinomycetemcomitans D11S-1] Length = 240 Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 54/218 (24%), Positives = 111/218 (50%), Gaps = 23/218 (10%) Query: 183 MDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTG----KALPLLYISTFLIFGLPTLVLI 238 +D + + SF G+V++L + G + L +Y+S +I G P LV I Sbjct: 34 IDKTIPLAIISFFAGLVIALGVAVIRTMPKSSIGLLVLQLLCRIYVS--IIRGTPMLVQI 91 Query: 239 ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQME 298 + + + P +G + P F + IA S A+ +E +R+ ++++P+GQ E Sbjct: 92 ---FIIFYGLPEVG-------IKLDP-FPTAIIAFSINIGAYASETIRAAILSIPKGQWE 140 Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN 358 A+ ++G+ + + ++PQA+R +PPL++ +++ +K++SLA V ++ V I Sbjct: 141 ASYSIGMNYFQTFTRTIMPQALRVSVPPLSNTFISNVKDTSLASLVLVTEMFRVAQNI-- 198 Query: 359 QTGQAIEIILIW---MFIYLSLSIMIALFMNRLNAKIA 393 T + E I+I+ IY + ++++ RL +++ Sbjct: 199 -TAENYEFIMIYSEAALIYWCICLVLSFAQERLEKRLS 235 >gi|148379137|ref|YP_001253678.1| ABC transporter, permease protein [Clostridium botulinum A str. ATCC 3502] gi|148288621|emb|CAL82702.1| ABC transporter, permease protein [Clostridium botulinum A str. ATCC 3502] Length = 221 Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 40/127 (31%), Positives = 69/127 (54%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + IAL+ TA+F+AE +R+ L +V GQ+EA ++G+T + V+LPQA +P Sbjct: 91 FQATVIALTLNTASFMAETLRASLESVDVGQLEACYSMGMTRYQTMMRVVLPQAFVVALP 150 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 + +Q++ ++K S+L VG AD+++ + + E L IYL + I + Sbjct: 151 SIGNQFIGIIKGSALGFTVGLADIMAKAKMEAALSIRFFEAYLCVTLIYLVIVIFVEKIQ 210 Query: 386 NRLNAKI 392 L +I Sbjct: 211 RLLEKRI 217 >gi|107029118|ref|YP_626213.1| amino acid ABC transporter permease [Burkholderia cenocepacia AU 1054] gi|116686986|ref|YP_840233.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia cenocepacia HI2424] gi|170734709|ref|YP_001773823.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia cenocepacia MC0-3] gi|105898282|gb|ABF81240.1| amino acid ABC transporter membrane protein 2, PAAT family [Burkholderia cenocepacia AU 1054] gi|116652701|gb|ABK13340.1| amino acid ABC transporter membrane protein 2, PAAT family [Burkholderia cenocepacia HI2424] gi|169820747|gb|ACA95328.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia cenocepacia MC0-3] Length = 229 Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 39/129 (30%), Positives = 72/129 (55%), Gaps = 2/129 (1%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +++S +A++ EIVRSGL +V Q EAA+ L + K R V++PQA R I+PP Sbjct: 102 VSVSLIASAYLGEIVRSGLESVHPNQREAAVTLNFGYLKMLRYVVVPQAWRVIVPPTFGF 161 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL-IWMFIYLSLSIMIALFMNRLN 389 ++ +K+++LA +G +L S G ++N G + ++ + +Y ++S ++ F L Sbjct: 162 FVMFIKDTALASQIGVMELTS-AGKVLNDKGFSAGLVYGAILLLYFAMSYPLSRFGKHLE 220 Query: 390 AKIALKEKK 398 +A + Sbjct: 221 KSLAATRNR 229 >gi|303253452|ref|ZP_07339594.1| ABC-type amino acid transport system, permease component [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|302647696|gb|EFL77910.1| ABC-type amino acid transport system, permease component [Actinobacillus pleuropneumoniae serovar 2 str. 4226] Length = 153 Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 37/128 (28%), Positives = 69/128 (53%), Gaps = 6/128 (4%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I S A+ +E VR+ + +VP+GQ EA +G+T+ + R ++ PQA+R +PPL++ Sbjct: 26 IGFSLNIGAYGSETVRAAISSVPKGQWEAGYTIGMTYMQTFRRIIAPQAIRVAVPPLSNT 85 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI-----ILIWMFIYLSLSIMIALFM 385 ++ L K++SLA V ++ V + N + + + ++ W F + L ++ A Sbjct: 86 FIGLFKDTSLASVVTVTEMFRVAQQMANMSYDFLPVYIEAGLIYWCFCW-GLFLIQAKLE 144 Query: 386 NRLNAKIA 393 R N +A Sbjct: 145 RRFNRFVA 152 >gi|283852207|ref|ZP_06369480.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio sp. FW1012B] gi|283572433|gb|EFC20420.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio sp. FW1012B] Length = 230 Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 41/130 (31%), Positives = 71/130 (54%), Gaps = 1/130 (0%) Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321 V P + I + + A+ +E +R GL+++ RGQ+ AA ALG+T V+LPQA R Sbjct: 90 VLPPMWAAIIGFALCSGAYQSEYIRGGLLSIKRGQLRAAQALGMTPLTTVTSVVLPQAFR 149 Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 +P ++ + L+K SSLA + DL +G ++ + + E+ ++ YL+L + + Sbjct: 150 RALPGCGNEIIYLIKYSSLASIITVNDLTGMGRSLAKSSFRNTEVFVVVGLYYLAL-VTV 208 Query: 382 ALFMNRLNAK 391 A F+ R K Sbjct: 209 ATFVLRAVEK 218 >gi|229814979|ref|ZP_04445317.1| hypothetical protein COLINT_02022 [Collinsella intestinalis DSM 13280] gi|229809466|gb|EEP45230.1| hypothetical protein COLINT_02022 [Collinsella intestinalis DSM 13280] Length = 397 Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 38/122 (31%), Positives = 71/122 (58%) Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 + A++ E++R G+ +V GQMEAA +LGL+ +A R V+ PQ ++ IP L+++ + +K Sbjct: 262 STAYMMEVLRGGIESVDAGQMEAARSLGLSQWEAMRKVVFPQGVKFAIPGLSNELVINIK 321 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 +SS+ +G DL+ T+ E L+ +YL L++ + + RL +++ +K Sbjct: 322 DSSVLSVIGTFDLMFATTTVGGIYYAKFEAALVTSVMYLCLTMFASWLLGRLASRLDVKS 381 Query: 397 KK 398 K Sbjct: 382 VK 383 >gi|292492727|ref|YP_003528166.1| ectoine/hydroxyectoine ABC transporter permease protein EhuC [Nitrosococcus halophilus Nc4] gi|291581322|gb|ADE15779.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC [Nitrosococcus halophilus Nc4] Length = 214 Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 39/116 (33%), Positives = 69/116 (59%) Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338 A+ AE+VR + AVP+ Q EAAIAL T R+ +++PQA+ +++PP + + LLK++ Sbjct: 97 AYGAEVVRGAIQAVPQEQREAAIALNFTPRQTLWRIIIPQAIPAMLPPFGNLLIELLKST 156 Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394 +L + ++L G + T ++ EI + + +Y L+ +IA + RL K A+ Sbjct: 157 ALVSMITLSELTFQGQMLRASTLRSAEIFALVLVLYFLLAQIIAFIIRRLERKFAV 212 >gi|282881858|ref|ZP_06290509.1| probable amino-acid ABC transporter permease protein [Peptoniphilus lacrimalis 315-B] gi|300814772|ref|ZP_07095020.1| ABC transporter, permease protein [Peptoniphilus sp. oral taxon 836 str. F0141] gi|281298267|gb|EFA90712.1| probable amino-acid ABC transporter permease protein [Peptoniphilus lacrimalis 315-B] gi|300511159|gb|EFK38411.1| ABC transporter, permease protein [Peptoniphilus sp. oral taxon 836 str. F0141] Length = 240 Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 30/96 (31%), Positives = 61/96 (63%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 + ++ YI +S T A+++E+VR G+I++ +GQ EA+ A GL+H + V+ PQ +R+I+ Sbjct: 97 KILTAYIIVSVNTGAYMSEVVRGGIISIDKGQWEASRASGLSHIQTMLYVIGPQTLRNIL 156 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 P ++++ +K++S+ +G +L T+ Q+ Sbjct: 157 PATGNEFVINIKDTSVLNVIGVGELFFAAKTVAGQS 192 >gi|269303067|gb|ACZ33167.1| amino acid ABC transporter, permease protein [Chlamydophila pneumoniae LPCoLN] Length = 217 Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 38/121 (31%), Positives = 74/121 (61%), Gaps = 1/121 (0%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IALS +AA++AE +R G+ ++ GQ E+A+ LG + ++ PQ ++I+P LT++ Sbjct: 92 IALSMNSAAYLAENIRGGINSLSIGQWESAMVLGYKKYQIFIYIIYPQVFKNILPSLTNE 151 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 +++L+K SS+ + VG +L V I+++ +E+ LI +Y ++ + ++RL+ Sbjct: 152 FVSLIKESSILMVVGVPELTKVTKDIVSRELNPMEMYLICAGLYFLMTTAFSC-ISRLSE 210 Query: 391 K 391 K Sbjct: 211 K 211 >gi|262370797|ref|ZP_06064121.1| histidine transport system permease hisQ [Acinetobacter johnsonii SH046] gi|262314159|gb|EEY95202.1| histidine transport system permease hisQ [Acinetobacter johnsonii SH046] Length = 229 Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 67/235 (28%), Positives = 114/235 (48%), Gaps = 14/235 (5%) Query: 169 MFLNNRGLSFPTLTMDT--NAKIFVFSFVLGIVLSLF--ATRLSRHFHEKTGKALPLLYI 224 MFL+ G P L T ++ + S VL I++ LF + +LSR + + + LY Sbjct: 1 MFLSGYG---PVLLSGTWMTIQLALLSLVLSIIIGLFGASAKLSRI---QILRHVATLY- 53 Query: 225 STFLIFGLPTLV-LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283 T LI +P LV ++ L Y L + + + ++P F++ I L+ A+ E Sbjct: 54 -TTLIRSVPDLVIMLLLFYSLQLGLNSITESIHMEQIDINP-FVAGVITLAFIYGAYFTE 111 Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343 R AVP+GQ+EAA A G+T + R VL PQ MR +P + + + L+K ++L Sbjct: 112 TFRGAFQAVPKGQLEAAYAYGMTPFQVFRRVLFPQMMRFALPGIGNNWQVLIKATALVSL 171 Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 +G D+V + + Q ++ IYL+++ + L + L + + KK Sbjct: 172 IGLTDIVKITQDAGRSSMQVFYFSIVAAVIYLAITTLSNLILMWLERRYSAGVKK 226 >gi|257125489|ref|YP_003163603.1| polar amino acid ABC transporter inner membrane protein [Leptotrichia buccalis C-1013-b] gi|257049428|gb|ACV38612.1| polar amino acid ABC transporter, inner membrane subunit [Leptotrichia buccalis C-1013-b] Length = 521 Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 56/213 (26%), Positives = 109/213 (51%), Gaps = 25/213 (11%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGK----------ALPLLYISTFLIFGLPTLVLIAL 240 V F++G+V++LF S E+T K L +YI+ F G P +V + Sbjct: 306 VVGFLIGLVVALFRHSESET-DEQTQKYKKYGLKFINTLSSVYIAVFR--GTPMIVQSMV 362 Query: 241 KYQLHFDKPVLGQ-FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299 Y L Q FN +SP +L+I +S T A+++EI+R G+ ++ GQ EA Sbjct: 363 IYY------GLSQVFNI----NLSPMVAALFI-VSINTGAYMSEIIRGGIDSIDNGQFEA 411 Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359 A A+G+T+ + + ++ PQ R+I+P + ++ + +K++S+ + +L + ++ Sbjct: 412 AKAIGMTNFQLMQSIIFPQMFRNILPMIGNELIVNIKDTSVLNVISVTELFFISKSVAGT 471 Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 + E+ +I IY L+ ++L + ++ +I Sbjct: 472 YSRYYEVFIITSVIYFFLTFTLSLILKQIEKRI 504 >gi|167824250|ref|ZP_02455721.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Burkholderia pseudomallei 9] Length = 250 Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 36/96 (37%), Positives = 58/96 (60%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P ++ ALS A++A V +G+ A GQ +A ++LGLT + R VLLPQA+R + Sbjct: 109 PGLAAVVCALSLVGGAYLAHSVHAGIRAAGDGQWQAGLSLGLTRWQTVRHVLLPQAVRIM 168 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359 P +Q+++L+K++SLA VG +L V + N+ Sbjct: 169 TPSFVNQWVSLVKDTSLAYIVGVPELSFVATQVNNR 204 >gi|153012128|ref|YP_001373338.1| polar amino acid ABC transporter, inner membrane subunit [Ochrobactrum anthropi ATCC 49188] gi|151564016|gb|ABS17509.1| polar amino acid ABC transporter, inner membrane subunit [Ochrobactrum anthropi ATCC 49188] Length = 220 Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 55/162 (33%), Positives = 85/162 (52%), Gaps = 11/162 (6%) Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287 +I G+P LV QL + VL +F I S + + L IA S Y A E R+ Sbjct: 61 VIRGIPILV------QLFYIYFVLPEFG-IALSALQAGIIGLGIAYSAYQA----ENFRA 109 Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347 G+ A+ GQ EAA ++G+ R V+LPQA+R I+PP + + LLK+SS A A+ A Sbjct: 110 GIEAIDHGQTEAAQSIGMGWFMTMRRVILPQAVRVILPPYGNIMVMLLKDSSQASAITVA 169 Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 +L G + + T + + + + YL LS+ + + + RL Sbjct: 170 ELTLQGQLLASSTFKNMSVYTLVAMFYLCLSLPLMMAVGRLE 211 >gi|321312471|ref|YP_004204758.1| sulfur-containing amino acid ABC transporter permease [Bacillus subtilis BSn5] gi|320018745|gb|ADV93731.1| sulfur-containing amino acid ABC transporter (permease) [Bacillus subtilis BSn5] Length = 235 Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 41/130 (31%), Positives = 69/130 (53%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P M + +ALS A++ EI+RSG++A+ GQ+EAA ++GLTH + R V+LPQA+ Sbjct: 99 PVSMFVIMALSLTAGAYLTEIIRSGILAMDTGQVEAAYSIGLTHSQTFRRVILPQALMVS 158 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 IP T+ + L +S+A V ++ + + +E + IY L++++ Sbjct: 159 IPNFTNLGIGFLHTTSIAAIVAVPEITGTATIVASDNYAFLEAFIGAAIIYWVLTLILES 218 Query: 384 FMNRLNAKIA 393 L K A Sbjct: 219 VNGVLERKAA 228 >gi|238028317|ref|YP_002912548.1| amino acid ABC transporter permease [Burkholderia glumae BGR1] gi|237877511|gb|ACR29844.1| Amino acid ABC transporter, permease protein [Burkholderia glumae BGR1] Length = 229 Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 60/189 (31%), Positives = 95/189 (50%), Gaps = 16/189 (8%) Query: 169 MFLNNRG---LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225 MFL G LS T+ F+FVLG++ + A +LSR+ + L LY Sbjct: 1 MFLQGYGPLILSGTWQTIKLAVLSLAFAFVLGLLGA--AAKLSRN---RITNGLGTLY-- 53 Query: 226 TFLIFGLPTLVLIALK-YQLHFDKPVLGQF-NFIGGSTVSPE-FMSLYIALSCYTAAFIA 282 T LI G+P LVL+ L Y L L QF + + + + F + + L A+ Sbjct: 54 TTLIRGVPDLVLMLLLFYSLQI---WLNQFTDMMNWDQIDIDPFAAGVLVLGFIYGAYFT 110 Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342 E R ++VPRGQ+EA A G+++ + V+ PQ MR +P + + + L+K+++L Sbjct: 111 ETFRGAFLSVPRGQLEAGAAYGMSNWRVFSRVMFPQMMRFALPGIGNNWQVLVKSTALVS 170 Query: 343 AVGFADLVS 351 +G AD+V Sbjct: 171 IIGLADVVK 179 >gi|213966203|ref|ZP_03394388.1| glutamate ABC transport system, permease protein [Corynebacterium amycolatum SK46] gi|213951138|gb|EEB62535.1| glutamate ABC transport system, permease protein [Corynebacterium amycolatum SK46] Length = 220 Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 34/87 (39%), Positives = 53/87 (60%) Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321 V F +A YT+ F+AE +R+G+ VP GQ EAA +LGL+ ++ R ++ PQA R Sbjct: 85 VKQNFRLAVLAFVAYTSCFVAESLRAGINTVPFGQAEAARSLGLSFGQSFRYIIFPQAFR 144 Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFAD 348 I PL + + L KN+++A +G A+ Sbjct: 145 GAIVPLGNTLIALTKNTTIASVIGVAE 171 >gi|161524792|ref|YP_001579804.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia multivorans ATCC 17616] gi|189350454|ref|YP_001946082.1| polar amino acid transporter permease [Burkholderia multivorans ATCC 17616] gi|160342221|gb|ABX15307.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia multivorans ATCC 17616] gi|189334476|dbj|BAG43546.1| polar amino acid transport system permease protein [Burkholderia multivorans ATCC 17616] Length = 250 Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 35/96 (36%), Positives = 58/96 (60%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P ++ AL+ A++A V +G++A GQ +A ++LGLT + R VLLPQA+R + Sbjct: 94 PGLATVVCALALVGGAYLAHAVHAGIVAAGAGQWQAGLSLGLTRWQTVRHVLLPQAVRIM 153 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359 P +Q++ L+K++SLA VG +L V + N+ Sbjct: 154 TPSFVNQWVALVKDTSLAYIVGVPELSFVATQVNNR 189 >gi|15601513|ref|NP_233144.1| arginine transporter permease subunit ArtQ [Vibrio cholerae O1 biovar eltor str. N16961] gi|147672019|ref|YP_001215536.1| arginine transporter permease subunit ArtQ [Vibrio cholerae O395] gi|153818658|ref|ZP_01971325.1| membrane protein [Vibrio cholerae NCTC 8457] gi|229506085|ref|ZP_04395594.1| arginine ABC transporter permease protein ArtQ [Vibrio cholerae BX 330286] gi|229510058|ref|ZP_04399538.1| arginine ABC transporter permease protein ArtQ [Vibrio cholerae B33] gi|229516381|ref|ZP_04405828.1| arginine ABC transporter permease protein ArtQ [Vibrio cholerae RC9] gi|229605616|ref|YP_002876320.1| arginine transporter permease subunit ArtQ [Vibrio cholerae MJ-1236] gi|254849919|ref|ZP_05239269.1| conserved hypothetical protein [Vibrio cholerae MO10] gi|255746481|ref|ZP_05420428.1| arginine ABC transporter permease protein ArtQ [Vibrio cholera CIRS 101] gi|262152376|ref|ZP_06028509.1| arginine ABC transporter permease protein ArtQ [Vibrio cholerae INDRE 91/1] gi|262168600|ref|ZP_06036296.1| arginine ABC transporter permease protein ArtQ [Vibrio cholerae RC27] gi|9658180|gb|AAF96656.1| arginine ABC transporter, permease protein [Vibrio cholerae O1 biovar El Tor str. N16961] gi|126510811|gb|EAZ73405.1| membrane protein [Vibrio cholerae NCTC 8457] gi|146314402|gb|ABQ18942.1| arginine ABC transporter, permease protein [Vibrio cholerae O395] gi|227015181|gb|ACP11390.1| arginine ABC transporter, permease protein [Vibrio cholerae O395] gi|229346262|gb|EEO11233.1| arginine ABC transporter permease protein ArtQ [Vibrio cholerae RC9] gi|229352503|gb|EEO17443.1| arginine ABC transporter permease protein ArtQ [Vibrio cholerae B33] gi|229356436|gb|EEO21354.1| arginine ABC transporter permease protein ArtQ [Vibrio cholerae BX 330286] gi|229372102|gb|ACQ62524.1| arginine ABC transporter permease protein ArtQ [Vibrio cholerae MJ-1236] gi|254845624|gb|EET24038.1| conserved hypothetical protein [Vibrio cholerae MO10] gi|255736235|gb|EET91633.1| arginine ABC transporter permease protein ArtQ [Vibrio cholera CIRS 101] gi|262023129|gb|EEY41834.1| arginine ABC transporter permease protein ArtQ [Vibrio cholerae RC27] gi|262030827|gb|EEY49458.1| arginine ABC transporter permease protein ArtQ [Vibrio cholerae INDRE 91/1] Length = 229 Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 50/129 (38%), Positives = 74/129 (57%), Gaps = 16/129 (12%) Query: 228 LIFGLPTLVLIALKY----QLHFDKPVLGQFNFIGGS--TVSPEFMSLYIALSCYTAAFI 281 +I GLP L+++ Y Q+ F FI G +SP F+S IALS A++ Sbjct: 56 VIRGLPELLVVLFIYFGSTQVLF---------FITGEFIEISP-FISGVIALSLIFASYA 105 Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341 ++ +R L AV RGQ EAA ALG+ A ++LPQA+R +P L +Q+L LLK+++L Sbjct: 106 SQTLRGALKAVGRGQREAASALGIPPSHAFIRIVLPQAVRHALPGLMNQWLVLLKDTALV 165 Query: 342 VAVGFADLV 350 +G DL+ Sbjct: 166 SLIGVTDLL 174 >gi|330432867|gb|AEC17926.1| glutamine ABC transporter permease protein [Gallibacterium anatis UMN179] Length = 219 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 54/208 (25%), Positives = 101/208 (48%), Gaps = 32/208 (15%) Query: 191 VFSFVLGIVLSLFA-------TRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243 +FS ++GI+ ++ +R+++ + E + PLL FL FG+ L + + Sbjct: 29 LFSLIIGIICAVLLVYPVRVLSRIAKAYIE-ISRNTPLLIQIFFLYFGVAKLGI-----K 82 Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 L + F+GGS ++AE R GL+AV +GQ+E+A+++ Sbjct: 83 LDSITCAIISLAFLGGS-------------------YMAEAFRGGLLAVSKGQIESALSI 123 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363 GLT + R V+ PQA IP + + L L+K +S+ A+ +L+ + II + Sbjct: 124 GLTPFQVFRYVIFPQAFAVAIPAIGANCLFLIKETSIVSAIAITELMFLAKEIIGMDYKT 183 Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAK 391 E + + M YL + + +++F+ L + Sbjct: 184 NEALFLLMLFYLIVLLPLSIFVRYLEKR 211 Score = 37.4 bits (85), Expect = 3.7, Method: Compositional matrix adjust. Identities = 20/57 (35%), Positives = 35/57 (61%) Query: 96 TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSV 152 T +LA +G++ + IIG + + ++++ I + Y+E+ RN P L+ IFFLY V Sbjct: 20 TLYLAGAGILFSLIIGIICAVLLVYPVRVLSRIAKAYIEISRNTPLLIQIFFLYFGV 76 >gi|229593271|ref|YP_002875390.1| putative ABC transporter membrane protein [Pseudomonas fluorescens SBW25] gi|229365137|emb|CAY53375.1| putative ABC transport system, membrane protein [Pseudomonas fluorescens SBW25] Length = 222 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 47/179 (26%), Positives = 87/179 (48%), Gaps = 24/179 (13%) Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279 P L F+ FGLP+L L ++Q +++ I L Y+ Sbjct: 68 PFLVQLFFIFFGLPSLGLKITEWQ--------------------AAVLAMVINLGAYS-- 105 Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339 EI+R+G+ A+PRGQ+EAA AL +T +A R V+L A+ + P L+SQ + ++ S+ Sbjct: 106 --TEIIRAGIQAIPRGQLEAAAALAMTRFEAFRHVVLLPALGKVWPALSSQIIIVMLGSA 163 Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 + + +L I ++ +A E + +YL +++MI +N + + ++ + Sbjct: 164 VCSQIATEELSFAANFIQSRNFRAFETYALTTLVYLCMALMIRQLLNWIGRRFVMRNSR 222 >gi|150019161|ref|YP_001311415.1| polar amino acid ABC transporter, inner membrane subunit [Clostridium beijerinckii NCIMB 8052] gi|149905626|gb|ABR36459.1| polar amino acid ABC transporter, inner membrane subunit [Clostridium beijerinckii NCIMB 8052] Length = 235 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 63/218 (28%), Positives = 106/218 (48%), Gaps = 34/218 (15%) Query: 191 VFSFVLGIVLSLFAT--RLSR---------HFHEKTGKALPLLYISTFLIFGLPTLVLIA 239 VF F L I+L LF R+S+ F E + PLL ++ + +P LV I Sbjct: 32 VFGFFLAIILGLFIAIGRISKIKILRGFLLVFLEFI-RGTPLLVQLVYMYYVVPLLVSII 90 Query: 240 LK-----YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294 ++ YQ V G + L I CY I+E++RS ++++ Sbjct: 91 VQIWNPGYQFKISSLVAGT-------------IGLGINYGCY----ISEVIRSSILSIDG 133 Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354 GQ EAA+ALGLT+ + +++PQA+R++IP + + +LK++SL V ++L+ Sbjct: 134 GQTEAALALGLTNNQTMFRIIIPQALRNVIPVFGNYLVMMLKDTSLLAYVSVSELLLRTQ 193 Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 + +Q+ IE I YL LS+ +A + + K+ Sbjct: 194 SYASQSFLTIESYTILAGFYLILSLPLAQLVKLVEKKM 231 >gi|145631225|ref|ZP_01786998.1| arginine ABC transporter permease protein [Haemophilus influenzae R3021] gi|144983152|gb|EDJ90647.1| arginine ABC transporter permease protein [Haemophilus influenzae R3021] Length = 221 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 47/172 (27%), Positives = 88/172 (51%), Gaps = 8/172 (4%) Query: 228 LIFGLPTLVLIALKY--QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285 L+ GLP ++++ L Y + + G++ G F +ALS AA+ ++ + Sbjct: 53 LLRGLPEIIVVLLVYFGSTELVEMLTGEYIEFGA------FGCGVLALSLIFAAYASQTL 106 Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345 R + A+P+GQ E+ ALGL+ +++PQ R +P L++Q+L LLK+++L +G Sbjct: 107 RGAIQAIPKGQWESGAALGLSKSYTFIHIVMPQVWRHALPGLSNQWLVLLKDTALVSLIG 166 Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 DL+ I T Q I IYL+++++ + + +L + E+ Sbjct: 167 VDDLMRQADLINTNTHQPFTWYGIAALIYLAVTLISQVGIRKLELRFTRFER 218 >gi|150376015|ref|YP_001312611.1| polar amino acid ABC transporter inner membrane subunit [Sinorhizobium medicae WSM419] gi|150030562|gb|ABR62678.1| polar amino acid ABC transporter, inner membrane subunit [Sinorhizobium medicae WSM419] Length = 217 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 42/126 (33%), Positives = 68/126 (53%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + + LS YTAAF AEIVR G+ +VP AA +LG+T + R ++ P A R +P Sbjct: 87 FTTSGVVLSLYTAAFCAEIVRGGISSVPVTTRRAARSLGMTWWQDMRYIVAPLATRVSLP 146 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 L ++K+S+L + +G +L+ ++ + + + I+LI IY LS +A F Sbjct: 147 SWIGLTLGVMKDSALVLWLGLVELLRASQILVTRLQEPLFILLICGAIYFLLSFPVARFG 206 Query: 386 NRLNAK 391 L + Sbjct: 207 GYLEKR 212 >gi|158426029|ref|YP_001527321.1| amino acid ABC transporter, permease protein [Azorhizobium caulinodans ORS 571] gi|158332918|dbj|BAF90403.1| amino acid ABC transporter, permease protein [Azorhizobium caulinodans ORS 571] Length = 224 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 39/113 (34%), Positives = 71/113 (62%), Gaps = 2/113 (1%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA-TRLVLLPQAMRSIIPPLTS 329 +A+ A+ EIVR+G+ + +GQ+EA +ALGL + T +V+ P A+++I P LTS Sbjct: 95 LAMVVNIGAYATEIVRAGIETIHKGQIEAGLALGLKPVQVFTYIVIFP-ALKAIYPALTS 153 Query: 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382 Q++ L+ SS+ A+ +L ++ + QT ++ EI ++ +YL++S+M A Sbjct: 154 QFILLMLTSSVVSAISAEELTAIANNLQAQTFRSFEIYIVVTAMYLAMSLMFA 206 >gi|288561032|ref|YP_003424518.1| amino acid ABC transporter permease protein [Methanobrevibacter ruminantium M1] gi|288543742|gb|ADC47626.1| amino acid ABC transporter permease protein [Methanobrevibacter ruminantium M1] Length = 217 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 38/139 (27%), Positives = 80/139 (57%), Gaps = 3/139 (2%) Query: 256 FIGGSTVSPEF--MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313 +I G T+S ++ +++ IA + AA+ AEI R G+ ++P GQ EAA LG T + + Sbjct: 75 YIFGMTLSRDYRMIAVIIAFTINYAAYFAEIFRGGIESIPNGQYEAAQVLGYTRVQTFFI 134 Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI 373 ++LPQ ++ ++P +T++ + L+K++SL+ + ++ +V I +++ F Sbjct: 135 IILPQVVKIVLPSITNEVITLVKDTSLSFVLAIPEMFTVAKQIAAAEASISALLIAGGFY 194 Query: 374 YLSLSIMIALFMNRLNAKI 392 Y+ + ++A+ M R ++ Sbjct: 195 YV-FNALVAIIMERFEKRL 212 >gi|261212507|ref|ZP_05926792.1| arginine ABC transporter permease protein ArtQ [Vibrio sp. RC341] gi|260838438|gb|EEX65094.1| arginine ABC transporter permease protein ArtQ [Vibrio sp. RC341] Length = 229 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 40/89 (44%), Positives = 58/89 (65%), Gaps = 1/89 (1%) Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321 +SP F+S IALS A++ A+ +R L AV RGQ EAA ALG+ A ++LPQA+R Sbjct: 87 ISP-FISGVIALSLIFASYAAQTLRGALKAVGRGQREAASALGIPPAHAFFRIVLPQAVR 145 Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 +P L +Q+L LLK+++L +G DL+ Sbjct: 146 HALPGLMNQWLVLLKDTALVSLIGVTDLL 174 >gi|227514517|ref|ZP_03944566.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus fermentum ATCC 14931] gi|227087074|gb|EEI22386.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus fermentum ATCC 14931] Length = 224 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 29/76 (38%), Positives = 50/76 (65%) Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 AA+ AEI R GL ++ +GQ E A L L++ + R +++PQ ++ +IP + ++ +NL+K+ Sbjct: 107 AAYFAEIFRGGLQSISQGQYEGARVLRLSYWQTVRKIVIPQVVKIVIPSIGNEVINLIKD 166 Query: 338 SSLAVAVGFADLVSVG 353 SSL +G DL+ G Sbjct: 167 SSLVYVIGLGDLLRAG 182 >gi|218462542|ref|ZP_03502633.1| ABC transporter, membrane spanning protein [Rhizobium etli Kim 5] Length = 174 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 37/104 (35%), Positives = 60/104 (57%) Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 AA+ AE++R L+AVP+G++EA A G+TH R + LP+A+R +P + + + LK Sbjct: 56 AAYEAEVLRGALLAVPKGELEAGRAFGMTHWTLLRRIWLPRAIRIALPTIAGEVVLQLKA 115 Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 + LA V DL +V I T E +++ Y+ L+I+I Sbjct: 116 TPLAFTVTVMDLYAVAYKIRQDTLLVYEPLIVVTIFYVCLTIVI 159 >gi|28871279|ref|NP_793898.1| amino acid ABC transporter permease [Pseudomonas syringae pv. tomato str. DC3000] gi|28854529|gb|AAO57593.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tomato str. DC3000] Length = 237 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 53/156 (33%), Positives = 80/156 (51%), Gaps = 8/156 (5%) Query: 224 ISTFLIFGLPTLVLIALK-YQLHFDKPVLG---QFNFIGGSTVSPEFMSLYIALSCYTAA 279 I T LI G+P LVL+ L Y L +L ++ +I ++P F + I+L A Sbjct: 60 IYTTLIRGIPDLVLMLLIFYSLQTWLTMLTDAMEWEYI---EINP-FGAGVISLGFIYGA 115 Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339 + E R +++VPRGQ+EAA A GL + R V+ PQ MR +P + + + LLK ++ Sbjct: 116 YFTETFRGAILSVPRGQVEAATAYGLKRGQRFRYVVFPQMMRYALPGIGNNWQVLLKATA 175 Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375 L +G ADLV T Q +++ IYL Sbjct: 176 LVSIIGLADLVKASQDAGKSTYQLFYFLVLAALIYL 211 >gi|57242095|ref|ZP_00370035.1| amino acid ABC transporter, permease protein [Campylobacter upsaliensis RM3195] gi|315638190|ref|ZP_07893372.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Campylobacter upsaliensis JV21] gi|57017287|gb|EAL54068.1| amino acid ABC transporter, permease protein [Campylobacter upsaliensis RM3195] gi|315481726|gb|EFU72348.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Campylobacter upsaliensis JV21] Length = 219 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 37/124 (29%), Positives = 65/124 (52%), Gaps = 7/124 (5%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I S YT++ +AEI+R GL ++P+GQ EAA + G ++LPQ R ++P + SQ Sbjct: 91 IGFSLYTSSVMAEIIRGGLNSIPKGQFEAAYSQGFGKFFTLFYIILPQTFRRVVPSMLSQ 150 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL-------IWMFIYLSLSIMIAL 383 + +K+++ +G A+L TI+ EI+ I+ I SLS+++ Sbjct: 151 IITTIKDTAYLAGLGIAELTYKSKTILANLKSFEEILAIIGFVAGIYFVICFSLSMLVRY 210 Query: 384 FMNR 387 + + Sbjct: 211 YAKK 214 >gi|307250883|ref|ZP_07532811.1| Amino acid ABC transporter, permease protein [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|306857133|gb|EFM89261.1| Amino acid ABC transporter, permease protein [Actinobacillus pleuropneumoniae serovar 4 str. M62] Length = 238 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 48/173 (27%), Positives = 92/173 (53%), Gaps = 19/173 (10%) Query: 193 SFVLGIVLS-----LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247 SF++G+ ++ + T ++ H + A+ +YIS +I G P LV I++ + + Sbjct: 42 SFIIGMAIAVGVALIRVTPVNGMLH-RIALAIVKVYIS--IIRGTPMLVQISVVF---YG 95 Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307 P +G + + P + I S A+ +E VR+ + +VP+GQ EA +G+T+ Sbjct: 96 LPAIGVY-------IDP-IPAAIIGFSLNIGAYGSETVRAAISSVPKGQWEAGYTIGMTY 147 Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 + R ++ PQA+R +PPL++ ++ L K++SLA V ++ V + N + Sbjct: 148 MQTFRRIIAPQAIRVAVPPLSNTFIGLFKDTSLASVVTVTEMFRVAQQMANMS 200 >gi|257876242|ref|ZP_05655895.1| amino acid ABC transporter [Enterococcus casseliflavus EC20] gi|257810408|gb|EEV39228.1| amino acid ABC transporter [Enterococcus casseliflavus EC20] Length = 529 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 39/107 (36%), Positives = 62/107 (57%) Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 +S T A+++EIVR G+ AV GQ EAA A+G+TH + V+LPQ MR+I+P ++ + Sbjct: 394 VSINTGAYMSEIVRGGIFAVDDGQFEAAQAIGMTHWQTMIKVVLPQVMRNILPATGNEII 453 Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379 +K++++ + ADL G + Q + I IYL L+I Sbjct: 454 INIKDTAVLSVISVADLFFQGTSAAGTNFQYFQTFAIIGVIYLVLTI 500 >gi|170770015|ref|ZP_02904468.1| arginine ABC transporter, permease protein ArtQ [Escherichia albertii TW07627] gi|170121081|gb|EDS90012.1| arginine ABC transporter, permease protein ArtQ [Escherichia albertii TW07627] Length = 238 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 56/186 (30%), Positives = 95/186 (51%), Gaps = 8/186 (4%) Query: 217 KALPLLYISTFLIFGLPTLVLI---ALKYQLHFDK-PVLGQFNFIGGSTVSPEFMSLYIA 272 + LP + + F+ FG L+L L F + PV Q N I VSP F+ IA Sbjct: 55 RGLPEILVVLFIYFGSSQLLLTLSDGFTINLGFVQIPV--QMN-IENFDVSP-FLCGVIA 110 Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 LS AA+ ++ +R L AVP GQ E+ ALGL+ +++PQ R +P L +Q+L Sbjct: 111 LSLLYAAYASQTLRGALKAVPVGQWESGQALGLSKSAIFFRLVMPQMWRHALPGLGNQWL 170 Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 LLK+++L + DL+ +I +T + ++ IYL ++++ + R++ + Sbjct: 171 VLLKDTALVSLISVNDLMLQTKSIATRTQEPFTWYIVAAAIYLVITLLSQYILKRIDLRA 230 Query: 393 ALKEKK 398 E++ Sbjct: 231 TRFERR 236 >gi|326795939|ref|YP_004313759.1| polar amino acid ABC transporter inner membrane subunit [Marinomonas mediterranea MMB-1] gi|326546703|gb|ADZ91923.1| polar amino acid ABC transporter, inner membrane subunit [Marinomonas mediterranea MMB-1] Length = 516 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 36/133 (27%), Positives = 76/133 (57%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F++ ++L AA++AEI R+GL+++ +GQ EA AL + RL+++PQA+R +P Sbjct: 94 FIAGLVSLVITEAAYMAEIHRTGLLSIGKGQREAGHALSIGFLGVQRLIVIPQALRISMP 153 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 L ++Y+ ++K SSL A+ ++++ G + +Q +E +L Y+ + + + Sbjct: 154 ALINEYVTVIKLSSLVSAISLSEILQTGQRLYSQNFLVMETLLAVAVYYVGIVTIFGSVL 213 Query: 386 NRLNAKIALKEKK 398 + ++ + +K Sbjct: 214 QWIERRMDVPSRK 226 >gi|325567258|ref|ZP_08143925.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus casseliflavus ATCC 12755] gi|325158691|gb|EGC70837.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus casseliflavus ATCC 12755] Length = 529 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 39/107 (36%), Positives = 62/107 (57%) Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 +S T A+++EIVR G+ AV GQ EAA A+G+TH + V+LPQ MR+I+P ++ + Sbjct: 394 VSINTGAYMSEIVRGGIFAVDDGQFEAAQAIGMTHWQTMIKVVLPQVMRNILPATGNEII 453 Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379 +K++++ + ADL G + Q + I IYL L+I Sbjct: 454 INIKDTAVLSVISVADLFFQGTSAAGTNFQYFQTFAIIGVIYLVLTI 500 >gi|315635241|ref|ZP_07890518.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Aggregatibacter segnis ATCC 33393] gi|315475987|gb|EFU66742.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Aggregatibacter segnis ATCC 33393] Length = 219 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 47/154 (30%), Positives = 85/154 (55%), Gaps = 5/154 (3%) Query: 243 QLHFDKPVLGQ--FNFIGGSTVSPE---FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQM 297 +L + P+L Q F + G S + + F I L+ +++AE +R GL AV +GQ+ Sbjct: 58 ELSRNTPLLIQVFFLYFGLSKIGLKLDGFTCGIIGLAFLGGSYMAEAIRGGLEAVSKGQI 117 Query: 298 EAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII 357 E+A+++GLT +A R V+ PQA P + + L L+K +S+ AV A+L+ V +I Sbjct: 118 ESALSIGLTPFQAFRYVIFPQAFAIATPAIGANCLFLMKETSVISAVAVAELMFVAKEVI 177 Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 + E + + + YL + + ++LF++ L + Sbjct: 178 GLDYKTNEALFLLVVFYLIILLPMSLFISYLERR 211 Score = 38.1 bits (87), Expect = 2.5, Method: Compositional matrix adjust. Identities = 19/54 (35%), Positives = 31/54 (57%) Query: 96 TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 T LAF G++ + +IG + K + W+ + Y+E+ RN P L+ +FFLY Sbjct: 20 TLHLAFWGILLSLVIGVICAVITTYKVKSLTWLVKGYIELSRNTPLLIQVFFLY 73 >gi|311894709|dbj|BAJ27117.1| putative amino acid ABC transporter permease protein [Kitasatospora setae KM-6054] Length = 293 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 44/129 (34%), Positives = 75/129 (58%), Gaps = 10/129 (7%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 +A LY+ F G+PT++LI L + F P + + G+ SP + + Y Sbjct: 119 RATAALYVDVFR--GVPTMLLIFL---IGFGVPAMQ----LQGTPKSPVVLGAIALVVSY 169 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 TA ++AE+ R+GL +V Q AA ALGL+ ++ R V+LPQA+R+++P L + ++ L K Sbjct: 170 TA-YVAEVFRAGLTSVHPAQHNAARALGLSRQQTMRSVVLPQAVRNVLPALLNDFIALQK 228 Query: 337 NSSLAVAVG 345 +++L +G Sbjct: 229 DTALVAVLG 237 >gi|302339788|ref|YP_003804994.1| polar amino acid ABC transporter inner membrane subunit [Spirochaeta smaragdinae DSM 11293] gi|301636973|gb|ADK82400.1| polar amino acid ABC transporter, inner membrane subunit [Spirochaeta smaragdinae DSM 11293] Length = 357 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 36/125 (28%), Positives = 68/125 (54%), Gaps = 3/125 (2%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + ++C+ +A++AE++R GL ++P+GQ EA+ +LG L++LPQ ++ + + Sbjct: 223 VGMTCFQSAYLAEVIRGGLQSIPKGQYEASDSLGFGFSLQQYLIILPQVLKVTVANIGGI 282 Query: 331 YLNLLKNSSLAVAVGFADL---VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387 ++ LK+++L + +G DL VS + N G E L IY + I+ NR Sbjct: 283 SISFLKDTTLVLIIGMFDLLGMVSPLASDSNWLGMEPEGYLFAGLIYWLICFTISRITNR 342 Query: 388 LNAKI 392 + K+ Sbjct: 343 IEEKV 347 >gi|260459413|ref|ZP_05807668.1| polar amino acid ABC transporter, inner membrane subunit [Mesorhizobium opportunistum WSM2075] gi|259034967|gb|EEW36223.1| polar amino acid ABC transporter, inner membrane subunit [Mesorhizobium opportunistum WSM2075] Length = 239 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 48/176 (27%), Positives = 88/176 (50%), Gaps = 14/176 (7%) Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVS-P 264 RL+ + + + LP L FG+P L L++ + + +P +T+ Sbjct: 58 RLAANIYTTVFRGLPELVTLFLFFFGVPIL----LQHLIRYFRPE---------ATIDVN 104 Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 F++ I LS +++ +E+ S A+P+GQ E A+GL++ + R V+LPQ +R Sbjct: 105 SFVAGMIVLSLIFSSYASEVFLSAFRAIPKGQYEGGYAIGLSYGQTMRKVILPQLLRIAF 164 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380 P L + +L+LLK++SL VG A+ + G T + + ++L L+I+ Sbjct: 165 PGLENCWLSLLKDTSLVSVVGLAETLRNAGVAARVTKHSFLFYGVAALVFLGLAIV 220 >gi|221218202|ref|YP_002524229.1| ABC amino acid transporter, inner membrane subunit [Rhodobacter sphaeroides KD131] gi|221163229|gb|ACM04195.1| ABC amino acid transporter, inner membrane subunit [Rhodobacter sphaeroides KD131] Length = 243 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 39/95 (41%), Positives = 53/95 (55%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F S +A+S + A A+I+R+GL +V RGQ E A A G K LV LPQAM I+P Sbjct: 84 FWSCCLAISVWGGANGAQILRAGLASVGRGQRETAAAFGFGPVKTLLLVTLPQAMPVIVP 143 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 P L++ +SL VG +L+ G +I QT Sbjct: 144 PYVGLLTALVQATSLGAVVGAQELLRTGQVLIEQT 178 >gi|170700297|ref|ZP_02891310.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria IOP40-10] gi|170134784|gb|EDT03099.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria IOP40-10] Length = 244 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 39/125 (31%), Positives = 73/125 (58%), Gaps = 1/125 (0%) Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316 +GG+ ++P F+ I +S + AF AE +R+GL AVPR +EAA +LG + R+ V L Sbjct: 103 LGGNPLTP-FIWSVIVISLHKGAFHAEALRAGLEAVPRATLEAAQSLGYSRRQRLWHVQL 161 Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376 P A+R +P L + ++L+K +++A A+ D+ I Q +E++++ + + + Sbjct: 162 PLAVRFALPALVNNLVDLVKMTTVASAIAVGDVTYASIMIWTQRDNVLELMILILLFFGA 221 Query: 377 LSIMI 381 L+ + Sbjct: 222 LTFTV 226 >gi|77404678|ref|YP_345252.1| ABC amino acid transporter, inner membrane subunit [Rhodobacter sphaeroides 2.4.1] gi|77390328|gb|ABA81511.1| ABC amino acid transporter, inner membrane subunit [Rhodobacter sphaeroides 2.4.1] Length = 243 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 39/95 (41%), Positives = 53/95 (55%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F S +A+S + A A+I+R+GL +V RGQ E A A G K LV LPQAM I+P Sbjct: 84 FWSCCLAISVWGGANGAQILRAGLASVGRGQRETAAAFGFGPVKTLLLVTLPQAMPVIVP 143 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 P L++ +SL VG +L+ G +I QT Sbjct: 144 PYVGLLTALVQATSLGAVVGAQELLRTGQVLIEQT 178 >gi|308178341|ref|YP_003917747.1| L-cystine ABC transporter inner membrane subunit TcyB [Arthrobacter arilaitensis Re117] gi|307745804|emb|CBT76776.1| L-cystine ABC transporter, inner membrane subunit TcyB [Arthrobacter arilaitensis Re117] Length = 221 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 37/134 (27%), Positives = 74/134 (55%), Gaps = 1/134 (0%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G T+ P + S IA S + AEI+R+ +++VP+GQ EA LG++ + ++LPQ Sbjct: 83 GLTIDP-WPSAIIAFSLNIGGYAAEIIRAAILSVPQGQWEAGYTLGMSRTRTLYRLILPQ 141 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378 A R +PPL++ +++L+K++SLA + ++ I T + + + IY + Sbjct: 142 ATRVAVPPLSNSFISLVKDTSLASTILVTEMFRKAQEITASTYEFLLLYCEAAAIYWVIC 201 Query: 379 IMIALFMNRLNAKI 392 ++++ N + ++ Sbjct: 202 LVLSALQNSVEGRL 215 >gi|303250830|ref|ZP_07337024.1| hypothetical amino-acid ABC transporter permease protein [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307253267|ref|ZP_07535141.1| Amino acid ABC transporter, permease protein [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|302650343|gb|EFL80505.1| hypothetical amino-acid ABC transporter permease protein [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306859254|gb|EFM91293.1| Amino acid ABC transporter, permease protein [Actinobacillus pleuropneumoniae serovar 6 str. Femo] Length = 238 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 48/173 (27%), Positives = 92/173 (53%), Gaps = 19/173 (10%) Query: 193 SFVLGIVLS-----LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247 SF++G+ ++ + T ++ H + A+ +YIS +I G P LV I++ + + Sbjct: 42 SFIIGMAIAVGVALIRVTPVNGMLH-RIALAIVKVYIS--IIRGTPMLVQISVVF---YG 95 Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307 P +G + + P + I S A+ +E VR+ + +VP+GQ EA +G+T+ Sbjct: 96 LPAIGVY-------IDP-IPAAIIGFSLNIGAYGSETVRAAISSVPKGQWEAGYTIGMTY 147 Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 + R ++ PQA+R +PPL++ ++ L K++SLA V ++ V + N + Sbjct: 148 MQTFRRIIAPQAIRVAVPPLSNTFIGLFKDTSLASVVTVTEMFRVAQQMANMS 200 >gi|184154979|ref|YP_001843319.1| glutamine ABC transporter permease component [Lactobacillus fermentum IFO 3956] gi|260663374|ref|ZP_05864265.1| glutamine ABC transporter permease component [Lactobacillus fermentum 28-3-CHN] gi|183226323|dbj|BAG26839.1| glutamine ABC transporter permease component [Lactobacillus fermentum IFO 3956] gi|260552226|gb|EEX25278.1| glutamine ABC transporter permease component [Lactobacillus fermentum 28-3-CHN] gi|299782992|gb|ADJ40990.1| Glutamine ABC transporter permease component [Lactobacillus fermentum CECT 5716] Length = 215 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 29/76 (38%), Positives = 50/76 (65%) Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 AA+ AEI R GL ++ +GQ E A L L++ + R +++PQ ++ +IP + ++ +NL+K+ Sbjct: 98 AAYFAEIFRGGLQSISQGQYEGARVLRLSYWQTVRKIVIPQVVKIVIPSIGNEVINLIKD 157 Query: 338 SSLAVAVGFADLVSVG 353 SSL +G DL+ G Sbjct: 158 SSLVYVIGLGDLLRAG 173 >gi|171779323|ref|ZP_02920287.1| hypothetical protein STRINF_01168 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] gi|171281940|gb|EDT47371.1| hypothetical protein STRINF_01168 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] Length = 213 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 32/91 (35%), Positives = 53/91 (58%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +A + AA+ AEI R G+ A+P+GQ EAA L L + ++LPQ + ++P + ++ Sbjct: 89 LAFTLNYAAYFAEIFRGGIAAIPKGQYEAAKVLKLNQLQTIHYIILPQVFKIVLPSVFNE 148 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361 +NL+K+SSL +G DL+ T N+ Sbjct: 149 IINLVKDSSLVYVLGVGDLLLASKTAANRDA 179 >gi|167911014|ref|ZP_02498105.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Burkholderia pseudomallei 112] Length = 193 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 36/96 (37%), Positives = 58/96 (60%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P ++ ALS A++A V +G+ A GQ +A ++LGLT + R VLLPQA+R + Sbjct: 40 PGLAAVVCALSLVGGAYLAHSVHAGIRAAGAGQWQAGLSLGLTRWQTVRHVLLPQAVRIM 99 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359 P +Q+++L+K++SLA VG +L V + N+ Sbjct: 100 TPSFVNQWVSLVKDTSLAYIVGVPELSFVATQVNNR 135 >gi|110636300|ref|YP_676508.1| polar amino acid ABC transporter, inner membrane subunit [Mesorhizobium sp. BNC1] gi|110287284|gb|ABG65343.1| amino acid ABC transporter membrane protein 1, PAAT family [Chelativorans sp. BNC1] Length = 234 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 38/119 (31%), Positives = 70/119 (58%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +AL A+ AEI R+G ++P Q EAA +L L+ + V+LPQA+R+I PL+ Q Sbjct: 94 VALVINCGAYSAEIFRAGFQSIPPAQKEAAESLALSKIQTFVYVILPQALRNIWVPLSGQ 153 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 ++ ++ SS+ + +L + I +QT ++ E+ ++ +YL+LSI++ + R+ Sbjct: 154 FILIMLASSIVSQISAEELTAAASQIQSQTFRSFEVYVVLAALYLALSIVLKTVLVRMG 212 >gi|327189353|gb|EGE56521.1| putative amino acid ABC transporter, permease protein [Rhizobium etli CNPAF512] Length = 268 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 54/212 (25%), Positives = 104/212 (49%), Gaps = 5/212 (2%) Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV-LI 238 L + + + + +G+ + F L + EK + +Y + F GLP L+ L Sbjct: 50 ALGLQVTVSVAIVTLPIGLAIG-FLVALGQQSEEKPLRLAAGIYTTIFR--GLPELLTLF 106 Query: 239 ALKYQLH-FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQM 297 + Y + + +L ++G F++ IALS +A+ +E++ S A+P+GQ Sbjct: 107 IIYYGMQMLIQSLLELAGYVGPPIEINAFLAGVIALSVVFSAYCSEVLLSAFRAIPKGQY 166 Query: 298 EAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII 357 EA +LGL + RL++LPQ +R +P LT+ ++ LLK++S + AD++ + Sbjct: 167 EAGDSLGLHRGRTLRLIILPQLVRIALPGLTNLWMVLLKDTSYVSIISLADILRQTSVAV 226 Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 T + I +YL L+I+ + + ++ Sbjct: 227 RVTKEPFFFYGIACCLYLVLAILSSFLLVHID 258 >gi|325062399|gb|ADY66089.1| polar amino acid uptake family ABC transporter, permease protein [Agrobacterium sp. H13-3] Length = 270 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 57/211 (27%), Positives = 102/211 (48%), Gaps = 17/211 (8%) Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKA---------LPLLYISTFLIFGLPTLVLIALKYQ 243 F+L I+LS+ + ++ G A LP ++ FL ++L A+ Y Sbjct: 61 GFILNILLSIASMAVATTLGTVMGLATLAKSPFIRLPAFFVMNFLRNSPWLVLLFAMLYI 120 Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 L F+ + F F+ P F+ I L+ TAA +E++R + ++ GQ EA+ +L Sbjct: 121 LPFEMKI---FGFV---VPFPPFVKAVIGLALPTAANFSEVIRGAVQSIHSGQWEASRSL 174 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363 G T + R V+LPQA+R +IP + Y L+ ++LA G D++++ T + + Sbjct: 175 GYTQLQIYRYVILPQALRRMIPGWMNLYALLMIATALATVTGIQDVLTILNTSLAMESER 234 Query: 364 --IEIILIWMFIYLSLSIMIALFMNRLNAKI 392 + L +F++ + IA+F RL + Sbjct: 235 ALVYFYLTILFLFFAYCYPIAIFARRLEHAV 265 >gi|302551653|ref|ZP_07303995.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Streptomyces viridochromogenes DSM 40736] gi|302469271|gb|EFL32364.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Streptomyces viridochromogenes DSM 40736] Length = 238 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 41/122 (33%), Positives = 63/122 (51%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +AL A+ +EIVR L AV Q E IAL T + RL+LLPQA+ +IPP ++ Sbjct: 88 LALGLTYGAYGSEIVRGALSAVDPAQKEGGIALSFTPWQRMRLILLPQAVPEMIPPFSNL 147 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 + LLK ++L +G DL G + ++ EI + IY ++ ++ M L Sbjct: 148 LIELLKGTALVSIMGMGDLAFSGNLVRLALQESAEIYTYILLIYFVIAFLLTRVMRGLEK 207 Query: 391 KI 392 K+ Sbjct: 208 KL 209 >gi|255261957|ref|ZP_05341299.1| histidine transport system permease protein HisQ [Thalassiobium sp. R2A62] gi|255104292|gb|EET46966.1| histidine transport system permease protein HisQ [Thalassiobium sp. R2A62] Length = 237 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 54/171 (31%), Positives = 85/171 (49%), Gaps = 20/171 (11%) Query: 191 VFSFVLGIV--LSLFATRLSR-----HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243 ++S LG+V L L A +LSR F E T I G+P +++ + + Sbjct: 31 LWSMTLGLVMGLGLAALKLSRFVLLRWFAEGY----------TLFIRGMPEFLILLIVF- 79 Query: 244 LHFDKPVLGQFNFIGGSTVS--PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301 D+ + N G + P+F++ LS AA+ EI R +AVP GQ+EAA Sbjct: 80 FGSDQLINALLNAFGSDARAEVPKFVAAVAGLSAIFAAYACEIFRGAYLAVPAGQIEAAQ 139 Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352 A+GL+ K R V PQ R IP L + ++ +LK++SLA + +L+ + Sbjct: 140 AVGLSVGKVFRRVRFPQMWRYAIPGLGNLWMVVLKDTSLAAVIALDELLRI 190 >gi|241205009|ref|YP_002976105.1| polar amino acid ABC transcriptional regulator inner membrane protein [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240858899|gb|ACS56566.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 268 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 48/161 (29%), Positives = 81/161 (50%), Gaps = 18/161 (11%) Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265 RL+ + + LP L + +G+ L+ L + + +D P + F+ G Sbjct: 86 RLAAGIYTTIFRGLPELLTLFIIYYGMQMLIQSLLTF-VGYDGPPIEINAFLAG------ 138 Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 IALS +A+ +E++ S A+P+GQ EA ALGL + RL++LPQ +R +P Sbjct: 139 ----VIALSVVFSAYCSEVLLSAFRAIPKGQYEAGDALGLHRGRTLRLIVLPQLVRIALP 194 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 LT+ ++ LLK++S + AD I+ QT A+ + Sbjct: 195 GLTNLWMVLLKDTSYVSIISLAD-------ILRQTSVAVRV 228 >gi|301630317|ref|XP_002944268.1| PREDICTED: hypothetical protein LOC100492530 [Xenopus (Silurana) tropicalis] Length = 511 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 31/74 (41%), Positives = 55/74 (74%) Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 AA+ +EI+R+G+ ++ RGQ+ A ALG+T+ + RLV+LPQA+R+++P L +Q + L ++ Sbjct: 159 AAYFSEIMRAGIQSIARGQVFAGQALGMTYGQNMRLVILPQALRNMLPVLLTQTIILFQD 218 Query: 338 SSLAVAVGFADLVS 351 +SL A+G D++ Sbjct: 219 TSLVYAIGAYDMLK 232 >gi|282862285|ref|ZP_06271347.1| polar amino acid ABC transporter, inner membrane subunit [Streptomyces sp. ACTE] gi|282562624|gb|EFB68164.1| polar amino acid ABC transporter, inner membrane subunit [Streptomyces sp. ACTE] Length = 291 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 54/197 (27%), Positives = 101/197 (51%), Gaps = 27/197 (13%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 V S VLG+VL++ RLS H P+ +++T I ++ L+ Y + Sbjct: 79 VGSLVLGVVLAV--GRLSDHK--------PVRWLATGFIELFRSIPLLITIYAIWV---- 124 Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 G +L LS Y AE++R+G+ +VP+GQ EAA ALG++ + Sbjct: 125 --------GFLTDYSMWALAAGLSVYNGCVQAEVLRAGVNSVPKGQSEAAYALGMSKTQV 176 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS-----VGGTIINQTGQAIE 365 VL+PQA+R+++P + SQ + LK++SL + + +L++ T++N + Sbjct: 177 MVGVLIPQAVRAMLPTIISQLVVTLKDTSLGYIILYPELLNSARLIASNTLVNGQYPYVS 236 Query: 366 IILIWMFIYLSLSIMIA 382 I++ IY+++ ++++ Sbjct: 237 TIVVIGVIYVAMCLLLS 253 Score = 38.1 bits (87), Expect = 2.2, Method: Compositional matrix adjust. Identities = 16/46 (34%), Positives = 31/46 (67%) Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLS 154 ++G ++ GRLS +K V W+ ++E+FR+IP L+ I+ ++ L+ Sbjct: 83 VLGVVLAVGRLSDHKPVRWLATGFIELFRSIPLLITIYAIWVGFLT 128 >gi|222109051|ref|YP_002551317.1| ABC transporter membrane spanning protein (opine) [Agrobacterium radiobacter K84] gi|221727973|gb|ACM31023.1| ABC transporter membrane spanning protein (opine) [Agrobacterium radiobacter K84] Length = 241 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 60/210 (28%), Positives = 110/210 (52%), Gaps = 10/210 (4%) Query: 177 SFPTL--TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234 SFP L + T + S ++G V+S+ L R + ++ Y+ +LI P Sbjct: 9 SFPKLIAAVPTTLALAFISLLIGFVVSV-PVALMRLSKNRIVSSVAYGYV--YLIRSTPL 65 Query: 235 LVLIALKYQLHFDKPVLGQFNFIG--GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292 LV + L Y + G IG S P F ++ +AL+ TAA+ +EI+R G+ AV Sbjct: 66 LVQMFLIY--YGSAQFRGFLTEIGLWSSFREPWFCAI-LALALNTAAYTSEIIRGGIQAV 122 Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352 P GQ+EAA A+G++ R ++ P A+R +P ++ + ++K++SLA + ++ + Sbjct: 123 PLGQIEAARAVGMSTVLQFRRIVFPIAIRQALPAYGNEVMLIIKSTSLASTITIVEVTGL 182 Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIA 382 II+ T +E+ ++ IYL ++ +++ Sbjct: 183 AKQIISATYSPVEVFIVAGAIYLFITFIVS 212 >gi|197302609|ref|ZP_03167664.1| hypothetical protein RUMLAC_01338 [Ruminococcus lactaris ATCC 29176] gi|197298507|gb|EDY33052.1| hypothetical protein RUMLAC_01338 [Ruminococcus lactaris ATCC 29176] Length = 228 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 48/180 (26%), Positives = 95/180 (52%), Gaps = 12/180 (6%) Query: 220 PLLYISTFLIF---GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 PL YI+ +++ G P ++ + + Y +F VL N + G S F++ +A Sbjct: 50 PLKYITNIIVWVVRGTPLMIQMLIIY--YFPGLVLN--NVVWGGGESGRFVAASVAFIFN 105 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 A + + I R G+ +VP+GQ EA + LG+T + + L Q ++ I+PP++++ + L+K Sbjct: 106 YACYFSVIYRGGIQSVPQGQTEAGLVLGMTKSQIFFKITLMQMIKRIVPPMSNEIITLVK 165 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI----YLSLSIMIALFMNRLNAKI 392 ++SLA + +++ G + + + Q I + MF YL + ++ + + RL K+ Sbjct: 166 DTSLARIIALQEIIWAGQSFLKGS-QGISGAIWPMFFAAVYYLVFNGILTVLLGRLEKKL 224 >gi|167919030|ref|ZP_02506121.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Burkholderia pseudomallei BCC215] Length = 242 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 36/96 (37%), Positives = 58/96 (60%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P ++ ALS A++A V +G+ A GQ +A ++LGLT + R VLLPQA+R + Sbjct: 109 PGLAAVVCALSLVGGAYLAHSVHAGIRAAGAGQWQAGLSLGLTRWQTVRHVLLPQAVRIM 168 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359 P +Q+++L+K++SLA VG +L V + N+ Sbjct: 169 TPSFVNQWVSLVKDTSLAYIVGVPELSFVATQVNNR 204 >gi|330427241|gb|AEC18575.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Pusillimonas sp. T7-7] Length = 279 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 41/110 (37%), Positives = 65/110 (59%) Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 + A+I+EIVR L++VP+G EA A+GL K ++ P A+R +IP + +Q + LK Sbjct: 161 SGAYISEIVRGALLSVPKGLKEAGQAMGLPFYKILAYIIGPVALRRMIPAMGNQCIISLK 220 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386 +SSL + +G A+L G II +++EI +YL L+ IAL + Sbjct: 221 DSSLFIVIGVAELTRQGQEIIASNFRSVEIWGAVAVLYLILTGFIALTLK 270 >gi|260461090|ref|ZP_05809339.1| polar amino acid ABC transporter, inner membrane subunit [Mesorhizobium opportunistum WSM2075] gi|259033124|gb|EEW34386.1| polar amino acid ABC transporter, inner membrane subunit [Mesorhizobium opportunistum WSM2075] Length = 215 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 37/119 (31%), Positives = 65/119 (54%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I L+ + +A++AEI RSG+ A+P GQ +A +LGL + + RL++LPQA P Sbjct: 91 IGLTFFASAYLAEIWRSGVDALPLGQWDAGASLGLHYLQELRLIILPQAFSITRAPTVGF 150 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 + L+K+++L +GF +LV I N T + ++ + I+ + + + RL Sbjct: 151 LVQLIKSTALTSIIGFEELVRTSNAINNATFEPFKVYGLVALIFFVMCFPLTQYARRLE 209 >gi|210630039|ref|ZP_03296224.1| hypothetical protein COLSTE_00108 [Collinsella stercoris DSM 13279] gi|210160716|gb|EEA91687.1| hypothetical protein COLSTE_00108 [Collinsella stercoris DSM 13279] Length = 229 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 31/80 (38%), Positives = 52/80 (65%) Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 AA+ AEI RSGL ++PRGQ EAA LG + + + LPQ ++ I+P + ++ + L+K+ Sbjct: 111 AAYFAEIYRSGLQSIPRGQYEAAEVLGYSKPQTFCYIALPQLIKRIMPAIGNEVITLVKD 170 Query: 338 SSLAVAVGFADLVSVGGTII 357 +SLA A+G ++ S ++ Sbjct: 171 TSLAFAIGVGEMFSTAKALV 190 >gi|190892106|ref|YP_001978648.1| probable amino acid ABC transporter, permease protein [Rhizobium etli CIAT 652] gi|190697385|gb|ACE91470.1| probable amino acid ABC transporter, permease protein [Rhizobium etli CIAT 652] Length = 268 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 54/212 (25%), Positives = 104/212 (49%), Gaps = 5/212 (2%) Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV-LI 238 L + + + + +G+ + F L + EK + +Y + F GLP L+ L Sbjct: 50 ALGLQVTVSVAIVTLPIGLAIG-FLVALGQQSEEKPLRLASGIYTTIFR--GLPELLTLF 106 Query: 239 ALKYQLH-FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQM 297 + Y + + +L ++G F++ IALS +A+ +E++ S A+P+GQ Sbjct: 107 IIYYGMQMLIQSLLELAGYVGPPIEINAFLAGVIALSVVFSAYCSEVLLSAFRAIPKGQY 166 Query: 298 EAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII 357 EA +LGL + RL++LPQ +R +P LT+ ++ LLK++S + AD++ + Sbjct: 167 EAGDSLGLHRGRTLRLIILPQLVRIALPGLTNLWMVLLKDTSYVSIISLADILRQTSVAV 226 Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 T + I +YL L+I+ + + ++ Sbjct: 227 RVTKEPFFFYGIACCLYLVLAILSSFLLVHID 258 >gi|241206675|ref|YP_002977771.1| polar amino acid ABC transcriptional regulator inner membrane protein [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240860565|gb|ACS58232.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 215 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 43/121 (35%), Positives = 68/121 (56%) Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 L+ Y +A++AEI RSG+ AVPRGQ +AA +LGL RL++LPQA R P + Sbjct: 93 LTFYASAYLAEIWRSGVEAVPRGQWDAAASLGLHRLLELRLIILPQAFRITRAPTVGFLV 152 Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 L+K+++LA +GF +L+ I N T + ++ + I+ +L + + L K Sbjct: 153 QLIKSTALASILGFDELLKTANAINNATFEPFKVYGLVAVIFFALCYPLTQYARFLEKKA 212 Query: 393 A 393 A Sbjct: 213 A 213 >gi|145637071|ref|ZP_01792734.1| arginine transporter permease subunit ArtQ [Haemophilus influenzae PittHH] gi|145269725|gb|EDK09665.1| arginine transporter permease subunit ArtQ [Haemophilus influenzae PittHH] Length = 221 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 47/172 (27%), Positives = 88/172 (51%), Gaps = 8/172 (4%) Query: 228 LIFGLPTLVLIALKY--QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285 L+ GLP ++++ L Y + + G++ G F +ALS AA+ ++ + Sbjct: 53 LLRGLPEIIVVLLVYFGSTELVEMLTGEYIEFGA------FGCGVLALSLIFAAYASQTL 106 Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345 R + A+P+GQ E+ ALGL+ +++PQ R +P L++Q+L LLK+++L +G Sbjct: 107 RGAIQAIPKGQWESGAALGLSKSYTFIHIVMPQVWRHALPGLSNQWLVLLKDTALVSLIG 166 Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 DL+ I T Q I IYL+++++ + + +L + E+ Sbjct: 167 VDDLMRQADLINTNTHQPFTWYGIAALIYLAVTLISQVGIRKLELRFTRFER 218 >gi|86151590|ref|ZP_01069804.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Campylobacter jejuni subsp. jejuni 260.94] gi|121612476|ref|YP_001000174.1| His/Glu/Gln/Arg/opine ABC transporter permease [Campylobacter jejuni subsp. jejuni 81-176] gi|167005132|ref|ZP_02270890.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Campylobacter jejuni subsp. jejuni 81-176] gi|85841219|gb|EAQ58467.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Campylobacter jejuni subsp. jejuni 260.94] gi|87250268|gb|EAQ73226.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Campylobacter jejuni subsp. jejuni 81-176] Length = 233 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 54/209 (25%), Positives = 105/209 (50%), Gaps = 18/209 (8%) Query: 191 VFSFVLG---IVLSLFATRLSRHFHE---KTGKALPLLYISTFLIFGLPTLVLIALKYQL 244 +FS ++G I++S F ++ + + + + PLL FL + LP K+ + Sbjct: 29 IFSLIIGLFCILMSYFKIKILENICKLYIEFSRNTPLLIQLFFLYYALP-------KFNI 81 Query: 245 HFDK-PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 H ++ P L T+ P F LS +++AE +R+G A+ + Q EA ++L Sbjct: 82 HLEQIPPLDLICLSVEETLRPSFACAIAGLSFLGGSYMAESLRAGFEAIRKQQFEAGLSL 141 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363 G + R V+LPQA+ +P +++ + L+K +S+ + DLV++ ++ + T + Sbjct: 142 GFSKFGNLRYVILPQALAISMPSISANIIFLIKETSVVSIIALPDLVNLMKSLNSLTYKT 201 Query: 364 IEIILI----WMFIYLSLSIMIALFMNRL 388 E++ + ++ I L LS ++ F RL Sbjct: 202 DELLFLLFMGYLCIILPLSFILLKFEKRL 230 Score = 37.7 bits (86), Expect = 3.1, Method: Compositional matrix adjust. Identities = 24/67 (35%), Positives = 36/67 (53%) Query: 86 ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145 A A L T L+F G+I + IIG K++ IC++Y+E RN P L+ + Sbjct: 10 APAFLTAAWLTIKLSFFGIIFSLIIGLFCILMSYFKIKILENICKLYIEFSRNTPLLIQL 69 Query: 146 FFLYKSV 152 FFLY ++ Sbjct: 70 FFLYYAL 76 >gi|326693557|ref|ZP_08230562.1| amino acid ABC transporter permease [Leuconostoc argentinum KCTC 3773] Length = 232 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 37/116 (31%), Positives = 69/116 (59%) Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333 S T A+ +E VR+ + +VPR Q+EAA +LG+ + V+LPQA R IPPL++ + Sbjct: 109 SLNTGAYASESVRAAISSVPRVQIEAAESLGMNRWQVFADVILPQAARISIPPLSNALIG 168 Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 LLK++SLA + ++ + I + Q + + ++ F+Y L+ ++++ ++L Sbjct: 169 LLKDTSLASVITIVEMFYLSQQIAAENYQILTMYILAAFVYAVLTTILSIAQHQLE 224 >gi|315124013|ref|YP_004066017.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|315017735|gb|ADT65828.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Campylobacter jejuni subsp. jejuni ICDCCJ07001] Length = 233 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 54/209 (25%), Positives = 105/209 (50%), Gaps = 18/209 (8%) Query: 191 VFSFVLG---IVLSLFATRLSRHFHE---KTGKALPLLYISTFLIFGLPTLVLIALKYQL 244 +FS ++G I++S F ++ + + + + PLL FL + LP K+ + Sbjct: 29 IFSLIIGLFCILMSYFKIKILENICKLYIEFSRNTPLLIQLFFLYYALP-------KFNI 81 Query: 245 HFDK-PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 H ++ P L T+ P F LS +++AE +R+G A+ + Q EA ++L Sbjct: 82 HLEQIPPLDLICLSVEETLRPSFACAIAGLSFLGGSYMAESLRAGFEAIRKQQFEAGLSL 141 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363 G + R V+LPQA+ +P +++ + L+K +S+ + DLV++ ++ + T + Sbjct: 142 GFSKFGNLRYVILPQALAISMPSISANIIFLIKETSVVSIIALPDLVNLMKSLNSLTYKT 201 Query: 364 IEIILI----WMFIYLSLSIMIALFMNRL 388 E++ + ++ I L LS ++ F RL Sbjct: 202 DELLFLLFMGYLCIILPLSFILLKFEKRL 230 Score = 37.4 bits (85), Expect = 3.8, Method: Compositional matrix adjust. Identities = 21/57 (36%), Positives = 33/57 (57%) Query: 96 TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSV 152 T L+F G+I + IIG K++ IC++Y+E RN P L+ +FFLY ++ Sbjct: 20 TIKLSFFGIIFSLIIGLFCILMSYFKIKILENICKLYIEFSRNTPLLIQLFFLYYAL 76 >gi|300722506|ref|YP_003711796.1| arginine ABC transporter membrane protein [Xenorhabdus nematophila ATCC 19061] gi|297629013|emb|CBJ89598.1| arginine transport protein (ABC superfamily, membrane) [Xenorhabdus nematophila ATCC 19061] Length = 238 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 54/185 (29%), Positives = 93/185 (50%), Gaps = 6/185 (3%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF---IGGSTVSPEFMSLYIAL 273 + LP + + F+ FG + LI L + ++ QF I VSP F+ IAL Sbjct: 55 RGLPEILVVLFIYFG-SSQFLITLSEGFEVNL-IVWQFKVQMDINSFDVSP-FLCGVIAL 111 Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333 S +A+ ++ +R L AVP GQ EA ALGL+ + +++PQ R +P L +Q+L Sbjct: 112 SLLYSAYASQTLRGALKAVPIGQWEAGQALGLSQSRIFFRLVMPQMWRHALPGLGNQWLV 171 Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393 LLK+++L + DL+ +I +T + + IYL+++++ + RL + Sbjct: 172 LLKDTALVSLISVNDLMLQTKSIATRTQEPFTWYVTVAAIYLAITLISQFILRRLEMRAT 231 Query: 394 LKEKK 398 E+ Sbjct: 232 RFERS 236 >gi|222082285|ref|YP_002541650.1| amino acid ABC transporter [Agrobacterium radiobacter K84] gi|221726964|gb|ACM30053.1| amino acid ABC transporter [Agrobacterium radiobacter K84] Length = 224 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 56/187 (29%), Positives = 95/187 (50%), Gaps = 18/187 (9%) Query: 195 VLGIVLSLF---ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251 VL I+LS+ + R + + + + YI ++ P LV++ Y ++F P + Sbjct: 29 VLAIILSVIIGCGLAIMRRSQSRFARFVAVAYIE--VMRNTPLLVIL---YIVYFALPAM 83 Query: 252 G-QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 G +F+ F + I L+ +A ++AEI+R+GL+A+ GQ EAA A G + Sbjct: 84 GLRFS---------SFAAASIGLTLNSAGYMAEIIRAGLVAIAHGQFEAARAQGFNPVQT 134 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370 R ++L Q R I PL +Q + ++ SSLA AV D+ S T+ + + + E L+ Sbjct: 135 YRHIILQQVFRVIYAPLGNQVIAVILASSLASAVAVEDVASWMQTVGSTSFRFFETFLVA 194 Query: 371 MFIYLSL 377 +YL L Sbjct: 195 AAVYLVL 201 >gi|86360896|ref|YP_472783.1| amino acid ABC transporter permease [Rhizobium etli CFN 42] gi|86284998|gb|ABC94056.1| probable amino acid ABC transporter, permease protein [Rhizobium etli CFN 42] Length = 219 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 52/169 (30%), Positives = 85/169 (50%), Gaps = 11/169 (6%) Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285 T +I G P LVL+ Y + V G + P F + +AL+ + ++ + EIV Sbjct: 60 TDIIRGTPVLVLVLASY--YVSAAV--------GLDLGP-FSAGVLALAVFCSSHVGEIV 108 Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345 R L A+P+GQ EAA A+GLT + VL PQAMR +P + ++K S+L +G Sbjct: 109 RGALQAIPKGQTEAAKAIGLTFAQTFTSVLWPQAMRQCLPAWVNTAAEMVKASTLLSVIG 168 Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394 A+L+ II++ +++ + +Y ++ I F + K AL Sbjct: 169 VAELLLRTQEIISRNFMSLQFYFLAGGLYFIVNYGIEHFGKYVERKTAL 217 >gi|134290994|ref|YP_001114763.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia vietnamiensis G4] gi|134134183|gb|ABO58508.1| amino acid ABC transporter membrane protein 1, PAAT family [Burkholderia vietnamiensis G4] Length = 240 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 53/197 (26%), Positives = 97/197 (49%), Gaps = 12/197 (6%) Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL----GQFNFIGGST 261 +LSRH ++ + L LY + F G+P L++I Y +F L GQ+ G Sbjct: 47 KLSRH---RSARLLGDLYTTVFR--GVPELLVI---YLFYFGGSTLVTAVGQWFGADGFI 98 Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321 P F+ +A+ + A+ AE+ R+ ++AV +G++EAA ++G+ R +L+PQ +R Sbjct: 99 GVPPFVIGALAVGMISGAYQAEVYRAAVLAVAKGELEAARSIGMPRGMVLRRILVPQVLR 158 Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 +P + + + LK+S+L G A+L+ N T Q + +YL ++ + Sbjct: 159 FALPGIGNVWQLSLKDSALISVTGLAELLRTSQVAANSTHQYFLFFVAGGALYLLMTALS 218 Query: 382 ALFMNRLNAKIALKEKK 398 NR A + ++ Sbjct: 219 NRVFNRAEALVGRSFRR 235 >gi|229526721|ref|ZP_04416125.1| arginine ABC transporter permease protein ArtQ [Vibrio cholerae bv. albensis VL426] gi|229336879|gb|EEO01897.1| arginine ABC transporter permease protein ArtQ [Vibrio cholerae bv. albensis VL426] Length = 229 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 50/129 (38%), Positives = 74/129 (57%), Gaps = 16/129 (12%) Query: 228 LIFGLPTLVLIALKY----QLHFDKPVLGQFNFIGGS--TVSPEFMSLYIALSCYTAAFI 281 +I GLP L+++ Y Q+ F FI G +SP F+S IALS A++ Sbjct: 56 VIRGLPELLVVLFIYFGSTQVLF---------FITGEFIEISP-FISGVIALSLIFASYA 105 Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341 ++ +R L AV RGQ EAA ALG+ A ++LPQA+R +P L +Q+L LLK+++L Sbjct: 106 SQTLRGALKAVGRGQREAASALGIPPSHAFIRIVLPQAVRHALPGLMNQWLVLLKDTALV 165 Query: 342 VAVGFADLV 350 +G DL+ Sbjct: 166 SLIGVTDLL 174 >gi|225868657|ref|YP_002744605.1| amino acid ABC transporter permease protein [Streptococcus equi subsp. zooepidemicus] gi|225870390|ref|YP_002746337.1| amino acid ABC transporter permease protein [Streptococcus equi subsp. equi 4047] gi|225699794|emb|CAW93605.1| putative amino acid ABC transporter permease protein [Streptococcus equi subsp. equi 4047] gi|225701933|emb|CAW99456.1| putative amino acid ABC transporter permease protein [Streptococcus equi subsp. zooepidemicus] Length = 213 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 33/91 (36%), Positives = 53/91 (58%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +A + AA+ AEI R G+ +P GQ EAA L L+ + R V+LPQ + ++P + ++ Sbjct: 89 LAFTLNYAAYFAEIFRGGIETIPNGQYEAAKVLKLSPVQTVRYVILPQVFKIVLPSVFNE 148 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361 +NL+K+SSL +G DL+ T N+ Sbjct: 149 VINLVKDSSLVYVLGVGDLLLASKTAANRDA 179 >gi|163857187|ref|YP_001631485.1| putative amino-acid ABC transporter, permease protein [Bordetella petrii DSM 12804] gi|163260915|emb|CAP43217.1| putative amino-acid ABC transporter, permease protein [Bordetella petrii] Length = 226 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 56/201 (27%), Positives = 97/201 (48%), Gaps = 14/201 (6%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 + SF G+VL+ F L R F AL Y+ +LI G P LV + + + + P Sbjct: 28 LLSFAGGLVLA-FIVALIRLFGPAPLVALVRFYV--WLIRGTPLLVQL---FVIFYGLPS 81 Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 +G V + I + A+ +E++R + ++P+GQ EAA +L +T +A Sbjct: 82 VG--------IVLDPLPAALIGFTLNVGAYNSEVIRGAIESIPKGQWEAAYSLSMTRGQA 133 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370 R +LPQA R +PPL + +++L+K++SLA + ++ I T + + + Sbjct: 134 MRRTVLPQAARVAVPPLANSFISLVKDTSLAAVLTVPEIFQAAQRIAAVTYEPLILYTEA 193 Query: 371 MFIYLSLSIMIALFMNRLNAK 391 IYL S ++ RL + Sbjct: 194 ALIYLVFSSALSAAQTRLERR 214 >gi|229528369|ref|ZP_04417760.1| arginine ABC transporter permease protein ArtQ [Vibrio cholerae 12129(1)] gi|254285779|ref|ZP_04960742.1| arginine ABC transporter, permease protein [Vibrio cholerae AM-19226] gi|150424276|gb|EDN16214.1| arginine ABC transporter, permease protein [Vibrio cholerae AM-19226] gi|229334731|gb|EEO00217.1| arginine ABC transporter permease protein ArtQ [Vibrio cholerae 12129(1)] gi|327485764|gb|AEA80170.1| Arginine ABC transporter, permease protein ArtQ [Vibrio cholerae LMA3894-4] Length = 229 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 50/129 (38%), Positives = 74/129 (57%), Gaps = 16/129 (12%) Query: 228 LIFGLPTLVLIALKY----QLHFDKPVLGQFNFIGGS--TVSPEFMSLYIALSCYTAAFI 281 +I GLP L+++ Y Q+ F FI G +SP F+S IALS A++ Sbjct: 56 VIRGLPELLVVLFIYFGSTQVLF---------FITGEFIEISP-FISGVIALSLIFASYA 105 Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341 ++ +R L AV RGQ EAA ALG+ A ++LPQA+R +P L +Q+L LLK+++L Sbjct: 106 SQTLRGALKAVGRGQREAASALGIPPSHAFIRIVLPQAVRHALPGLMNQWLVLLKDTALV 165 Query: 342 VAVGFADLV 350 +G DL+ Sbjct: 166 SLIGVTDLL 174 >gi|89214060|gb|ABD64372.1| amino acid ABC transporter permease protein 2 [Pseudomonas chlororaphis] Length = 215 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 34/102 (33%), Positives = 61/102 (59%), Gaps = 1/102 (0%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G +SP +++ IAL+ +T+A++AEI R + ++P GQ EA+ +L L + R V+LPQ Sbjct: 79 GVDISP-WLAAAIALTLFTSAYLAEIWRGCVDSIPNGQWEASSSLALNPYEQLRHVILPQ 137 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 A+R + P + ++K +++ +G +L GG + N T Sbjct: 138 ALRIAVAPTVGFSVQVVKGTAVTSIIGLTELTKTGGMLANAT 179 >gi|260463585|ref|ZP_05811784.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC [Mesorhizobium opportunistum WSM2075] gi|259030676|gb|EEW31953.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC [Mesorhizobium opportunistum WSM2075] Length = 242 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 57/204 (27%), Positives = 103/204 (50%), Gaps = 14/204 (6%) Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247 +I + +L +++ + A L+R + + L +Y+ F G LV QL + Sbjct: 42 EIAILGSLLAVIMGVLAA-LARLYGPAPLRWLATVYVEIFR--GTSALV------QLFWL 92 Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307 VL QF G T+ F+ +AL A+ +E+VR +++V RGQ E AL ++ Sbjct: 93 FFVLPQF----GVTLD-AFLVAVVALGLNVGAYGSEVVRGAILSVGRGQWEGCTALNMSR 147 Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367 + R V+LPQA ++IPP + ++ LLK++SL + +DL + T + I I Sbjct: 148 AQMLRRVILPQAFVAMIPPWGNLFIELLKSTSLVSLITLSDLAFKAQQMNQNTFKTIPIF 207 Query: 368 LIWMFIYLSLSIMIALFMNRLNAK 391 + + +YL +S+++ + M L + Sbjct: 208 TLVLLMYLVMSLVLTIGMRLLERR 231 Score = 39.7 bits (91), Expect = 0.94, Method: Compositional matrix adjust. Identities = 24/67 (35%), Positives = 35/67 (52%) Query: 83 SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142 S + +L G V T +A G + A I+G L RL + W+ VYVE+FR L Sbjct: 27 SLFLPGLLQGAVLTIEIAILGSLLAVIMGVLAALARLYGPAPLRWLATVYVEIFRGTSAL 86 Query: 143 VVIFFLY 149 V +F+L+ Sbjct: 87 VQLFWLF 93 >gi|209547731|ref|YP_002279648.1| polar amino acid ABC transporter inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209533487|gb|ACI53422.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 219 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 38/108 (35%), Positives = 65/108 (60%) Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340 IAE+ R+GL A+P GQ EAA+A+GLT ++ RL++ PQ +R I+ P+ ++ LLK+SSL Sbjct: 107 IAELFRAGLKAIPAGQGEAALAVGLTPVQSFRLIIFPQVVRVILAPMIVTFVALLKDSSL 166 Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388 A + +LV G + + ++I + Y +++ ++ RL Sbjct: 167 ASLITVNELVLTGRAMATEYFLPLQIYVAVGLCYFAIAWPFSVVSRRL 214 >gi|29831772|ref|NP_826406.1| amino acid ABC transporter permease protein [Streptomyces avermitilis MA-4680] gi|29608889|dbj|BAC72941.1| putative polar amino acid ABC transporter substrate-binding protein [Streptomyces avermitilis MA-4680] Length = 249 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 36/116 (31%), Positives = 60/116 (51%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + L C A+ +EIVR + AV Q EA IAL T + R ++LPQA ++PP + Sbjct: 91 LTLGCTYGAYGSEIVRGAVAAVAPAQREAGIALSFTPAQRLRKIILPQAWPEMVPPFNNL 150 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386 + LLK ++L +G D+ + N TGQ+ + + + +Y L+ ++ M Sbjct: 151 LIELLKGTALVSVLGVGDITFAAQLVRNATGQSAPVYTVILVMYFVLAFLLTRVMR 206 >gi|319407435|emb|CBI81086.1| glutamate/aspartate transport system permease protein [Bartonella sp. 1-1C] Length = 233 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 35/124 (28%), Positives = 71/124 (57%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I + + AA+ AEI+R+G++++ +GQ A ALG+T+ + R+V+LPQA R+++P +Q Sbjct: 108 ITFTAFEAAYFAEIMRAGILSISQGQKHAGQALGMTYWQNMRIVILPQAFRNMLPVFLTQ 167 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 + L ++++L A+ L++ + N G E ++ Y + ++ + L Sbjct: 168 IIILFQDTTLVYAISGNSLLNGFDIVSNNFGVKQEAYILAAIFYFVICFTLSQIVLLLQK 227 Query: 391 KIAL 394 KI++ Sbjct: 228 KISI 231 >gi|301155143|emb|CBW14607.1| unnamed protein product [Haemophilus parainfluenzae T3T1] Length = 219 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 47/154 (30%), Positives = 83/154 (53%), Gaps = 5/154 (3%) Query: 243 QLHFDKPVLGQ--FNFIGGSTVSPE---FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQM 297 +L + P+L Q F + G S + + F I L+ +++AE R GL AV +GQ+ Sbjct: 58 ELSRNTPLLIQVFFLYFGLSKIGLKLDGFTCGIIGLAFLGGSYMAEAFRGGLEAVSKGQI 117 Query: 298 EAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII 357 E+A+++GLT +A R V+ PQA P + + L L+K +S+ AV A+L+ V +I Sbjct: 118 ESALSIGLTPYQAFRYVIFPQAFAIATPAIGANCLFLMKETSVISAVAVAELMFVAKEVI 177 Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 + E + + + YL + + ++LF+ L + Sbjct: 178 GLDYKTNEALFLLVVFYLIILLPMSLFIGHLERR 211 Score = 38.1 bits (87), Expect = 2.4, Method: Compositional matrix adjust. Identities = 19/54 (35%), Positives = 31/54 (57%) Query: 96 TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 T LAF G++ + +IG + K + W+ + Y+E+ RN P L+ +FFLY Sbjct: 20 TLHLAFWGILLSLVIGVICAVITTYKVKSLTWLVKGYIELSRNTPLLIQVFFLY 73 >gi|261416889|ref|YP_003250572.1| polar amino acid ABC transporter, inner membrane subunit [Fibrobacter succinogenes subsp. succinogenes S85] gi|261373345|gb|ACX76090.1| polar amino acid ABC transporter, inner membrane subunit [Fibrobacter succinogenes subsp. succinogenes S85] gi|302326258|gb|ADL25459.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Fibrobacter succinogenes subsp. succinogenes S85] Length = 219 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 37/128 (28%), Positives = 70/128 (54%), Gaps = 3/128 (2%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 F ++ +A S AA+ AEI R G+ ++P+GQ EAA LGLT + ++LPQ ++ ++ Sbjct: 89 RFPAVIVAFSINYAAYFAEIFRGGIQSIPKGQYEAAAMLGLTRGQTFYRIILPQVVKRVV 148 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS---LSIMI 381 P ++ + L+K++SLA + +L ++ + + +F Y++ LS++ Sbjct: 149 PASANEVITLVKDTSLAQVIAVTELFALAKKQQAAYASIYPLFVAGVFYYIANLLLSVLF 208 Query: 382 ALFMNRLN 389 A +LN Sbjct: 209 AYVERKLN 216 >gi|331017447|gb|EGH97503.1| arginine/ornithine ABC transporter, permease protein [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 232 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 52/167 (31%), Positives = 85/167 (50%), Gaps = 11/167 (6%) Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL----YIALSCYTA 278 ++ T++I G P LV + L Y L QF + S + P S +A + T+ Sbjct: 56 WLYTYVIRGTPMLVQLFLIYY------GLAQFAAVRESFLWPWLSSATFCACLAFAINTS 109 Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338 A+ AEI+ L A P G++EAA A+G++ K R +LLP A+R +P +++ + +L+ + Sbjct: 110 AYTAEIIAGSLKATPAGEIEAARAMGMSKVKMYRRILLPSALRRALPQYSNEVIMMLQTT 169 Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS-IMIALF 384 SLA V D+ T+ Q E + YL L+ I++ LF Sbjct: 170 SLASIVTLIDITGAARTVNAQFYLPFEAYVTAGVFYLCLTFILVRLF 216 >gi|227485353|ref|ZP_03915669.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Anaerococcus lactolyticus ATCC 51172] gi|227236644|gb|EEI86659.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Anaerococcus lactolyticus ATCC 51172] Length = 524 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 40/123 (32%), Positives = 69/123 (56%), Gaps = 4/123 (3%) Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 +S T A+++E+VR G+ AV GQ EA A+GLT+ +A ++LPQ +++I+P L ++++ Sbjct: 384 VSINTGAYLSEVVRGGINAVDSGQFEACKAIGLTNWQAMTGIILPQTIKTILPSLGNEFV 443 Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA----LFMNRL 388 +K++S+ + +L + +I T Q LI IYL L+ I L R Sbjct: 444 INIKDTSVLNVISVTELFFMSKSIAGSTYQYFPTYLITAVIYLVLTFTITRLLLLIERRF 503 Query: 389 NAK 391 N + Sbjct: 504 NDR 506 >gi|213968636|ref|ZP_03396778.1| arginine/ornithine ABC transporter, permease protein [Pseudomonas syringae pv. tomato T1] gi|302059835|ref|ZP_07251376.1| arginine/ornithine ABC transporter, permease protein [Pseudomonas syringae pv. tomato K40] gi|302132496|ref|ZP_07258486.1| arginine/ornithine ABC transporter, permease protein [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213926569|gb|EEB60122.1| arginine/ornithine ABC transporter, permease protein [Pseudomonas syringae pv. tomato T1] Length = 232 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 52/167 (31%), Positives = 85/167 (50%), Gaps = 11/167 (6%) Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL----YIALSCYTA 278 ++ T++I G P LV + L Y L QF + S + P S +A + T+ Sbjct: 56 WLYTYVIRGTPMLVQLFLIYY------GLAQFAAVRESFLWPWLSSATFCACLAFAINTS 109 Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338 A+ AEI+ L A P G++EAA A+G++ K R +LLP A+R +P +++ + +L+ + Sbjct: 110 AYTAEIIAGSLKATPAGEIEAARAMGMSKVKMYRRILLPSALRRALPQYSNEVIMMLQTT 169 Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS-IMIALF 384 SLA V D+ T+ Q E + YL L+ I++ LF Sbjct: 170 SLASIVTLIDITGAARTVNAQFYLPFEAYVTAGVFYLCLTFILVRLF 216 >gi|323528628|ref|YP_004230780.1| ectoine/hydroxyectoine ABC transporter permease EhuD [Burkholderia sp. CCGE1001] gi|323385630|gb|ADX57720.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD [Burkholderia sp. CCGE1001] Length = 219 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 47/153 (30%), Positives = 81/153 (52%), Gaps = 8/153 (5%) Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301 Y L + PV G I S ++ + + + +CYT+ E+ R+GL V RGQ EAA Sbjct: 74 YVLFYVLPVYG----ITMSALTAGTVGIALHYACYTS----EVYRAGLNGVARGQWEAAC 125 Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361 AL L+ + R V+LPQA+R +IP L + + + K++ + A+ +L+ I ++T Sbjct: 126 ALSLSPWRTYRGVILPQAIRPVIPALGNYLVAMFKDTPVLSAITVVELMQQAKNIGSETF 185 Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394 + +E I + +L +S+ A + RL + L Sbjct: 186 RYLEPITLAGIFFLLISVTFAQLVRRLEYGLRL 218 >gi|89094512|ref|ZP_01167451.1| ABC basic amino acid transporter, inner membrane subunit [Oceanospirillum sp. MED92] gi|89081248|gb|EAR60481.1| ABC basic amino acid transporter, inner membrane subunit [Oceanospirillum sp. MED92] Length = 230 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 45/159 (28%), Positives = 81/159 (50%), Gaps = 12/159 (7%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 + +P L + + FG + VL+A+ +D+ + +SP F++ ALS Sbjct: 58 RGMPELLLVLTIYFG-SSAVLMAIASLFGYDEYI----------ELSP-FVAGVTALSIA 105 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 A+ E+ RS ++ +P+GQ EAA+ALG+T + R ++LPQ R +P L + +L LLK Sbjct: 106 FGAYATEVFRSAMMEIPKGQREAAVALGMTRFQTFRRIVLPQVWRLALPGLGNLFLVLLK 165 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375 +++L +G +L+ + T + +YL Sbjct: 166 DTALVSVIGLNELMRQTAVAVGNTKEPFTFYFAAAMVYL 204 >gi|182683630|ref|YP_001835377.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae CGSP14] gi|182628964|gb|ACB89912.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae CGSP14] Length = 305 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 69/290 (23%), Positives = 130/290 (44%), Gaps = 28/290 (9%) Query: 98 WLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLP 157 ++A G + + ++G +V R ++A + Y+E+ RN P L+ +FFLY + + Sbjct: 2 YIAVWGSLGSFLLGLIVSIIRHYRIPVLAQVATAYIELSRNTPLLIQLFFLYFGLPRIGI 61 Query: 158 IPDHSIVLPFGM-FLNNRGLS---FPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHF-- 211 + + G+ FL + L N + + I +S+ + LS F Sbjct: 62 VLSSEVYATLGLVFLGGSAMQDSGIQVLFQGNNLLRILQGLGVTIGISILSVLLSMMFGT 121 Query: 212 --------HEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF-IGGSTV 262 H + + L LY+ I +P LVL+ + Y + FN I G T Sbjct: 122 VMGIIMTSHSRIIRFLTRLYLEFIRI--MPQLVLLFIVY-----FGLARNFNINISGET- 173 Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322 S+ I + + A + ++VR + ++P+ Q E+ ALGLT+ + +++PQ +R Sbjct: 174 -----SVIIVFTLWGTAEMGDLVRGAITSLPKHQFESGQALGLTNVQLYYHIIIPQVLRR 228 Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372 ++P + ++K +SL V +G ++ VG II+ I W++ Sbjct: 229 LLPQAINLVTRMIKTTSLVVLIGVVEVTKVGQQIIDSNRLTIPTTSFWIY 278 >gi|121590873|ref|ZP_01678197.1| membrane protein [Vibrio cholerae 2740-80] gi|121728658|ref|ZP_01681676.1| arginine ABC transporter, permease protein [Vibrio cholerae V52] gi|153824338|ref|ZP_01977005.1| arginine ABC transporter, permease protein [Vibrio cholerae MZO-2] gi|227812325|ref|YP_002812335.1| arginine ABC transporter, permease protein [Vibrio cholerae M66-2] gi|229522318|ref|ZP_04411734.1| arginine ABC transporter permease protein ArtQ [Vibrio cholerae TM 11079-80] gi|254226189|ref|ZP_04919784.1| arginine ABC transporter, permease protein [Vibrio cholerae V51] gi|262189843|ref|ZP_06048176.1| arginine ABC transporter permease protein ArtQ [Vibrio cholerae CT 5369-93] gi|297580208|ref|ZP_06942135.1| membrane protein [Vibrio cholerae RC385] gi|298499554|ref|ZP_07009360.1| membrane protein [Vibrio cholerae MAK 757] gi|121547280|gb|EAX57401.1| membrane protein [Vibrio cholerae 2740-80] gi|121629069|gb|EAX61515.1| arginine ABC transporter, permease protein [Vibrio cholerae V52] gi|125621291|gb|EAZ49630.1| arginine ABC transporter, permease protein [Vibrio cholerae V51] gi|149741892|gb|EDM55921.1| arginine ABC transporter, permease protein [Vibrio cholerae MZO-2] gi|227011467|gb|ACP07678.1| arginine ABC transporter, permease protein [Vibrio cholerae M66-2] gi|229340303|gb|EEO05309.1| arginine ABC transporter permease protein ArtQ [Vibrio cholerae TM 11079-80] gi|262034274|gb|EEY52681.1| arginine ABC transporter permease protein ArtQ [Vibrio cholerae CT 5369-93] gi|297535854|gb|EFH74688.1| membrane protein [Vibrio cholerae RC385] gi|297541535|gb|EFH77586.1| membrane protein [Vibrio cholerae MAK 757] Length = 229 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 50/129 (38%), Positives = 74/129 (57%), Gaps = 16/129 (12%) Query: 228 LIFGLPTLVLIALKY----QLHFDKPVLGQFNFIGGS--TVSPEFMSLYIALSCYTAAFI 281 +I GLP L+++ Y Q+ F FI G +SP F+S IALS A++ Sbjct: 56 VIRGLPELLVVLFIYFGSTQVLF---------FITGEFIEISP-FISGVIALSLIFASYA 105 Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341 ++ +R L AV RGQ EAA ALG+ A ++LPQA+R +P L +Q+L LLK+++L Sbjct: 106 SQTLRGALKAVGRGQREAASALGIPPSHAFIRIVLPQAVRHALPGLMNQWLVLLKDTALV 165 Query: 342 VAVGFADLV 350 +G DL+ Sbjct: 166 SLIGVTDLL 174 >gi|295102636|emb|CBL00181.1| amino acid ABC transporter membrane protein, PAAT family (TC 3.A.1.3.-) [Faecalibacterium prausnitzii L2-6] Length = 227 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 38/133 (28%), Positives = 74/133 (55%), Gaps = 7/133 (5%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + IA + A+ AE +R L +VP+GQ+EA +G++ + R ++LPQA+R+ +P Sbjct: 95 FPAAVIAFAFNEGAYCAETMRGALESVPQGQLEAGCCVGMSWWQIMRRIVLPQALRTAVP 154 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 L++ + ++K++SLA + A+L G + +T I++ IY ++++ LF Sbjct: 155 ALSNSLIGMVKDTSLASNITVAELFMAGQRVAART-------YIFLPIYCEVAVVYLLFC 207 Query: 386 NRLNAKIALKEKK 398 + L E++ Sbjct: 208 TVITKLQGLLERQ 220 >gi|319780314|ref|YP_004139790.1| polar amino acid ABC transporter inner membrane subunit [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317166202|gb|ADV09740.1| polar amino acid ABC transporter, inner membrane subunit [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 218 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 49/148 (33%), Positives = 81/148 (54%), Gaps = 7/148 (4%) Query: 238 IALKYQLHFDKPVLGQ--FNFIG----GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291 IA ++ + P L Q F F G G + P ++ +A++ AA+ EIV +GL A Sbjct: 53 IACYVEVMRNTPFLVQLFFIFFGLPSLGVRLDP-LLAAMLAMTLNMAAYTIEIVGAGLDA 111 Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 VP GQ EAA+ALGL R+ ++LPQA++ I P LTSQ + ++ S++ + +L Sbjct: 112 VPGGQTEAALALGLRPRQVFVKIVLPQALKIIYPALTSQIVIMMLESAVVSQIAVRELTY 171 Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSI 379 + +T ++ E + +YL+LS+ Sbjct: 172 EADMLQARTFRSFETYFVVTLVYLALSM 199 >gi|301169917|emb|CBW29521.1| arginine transporter subunit [Haemophilus influenzae 10810] Length = 221 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 47/172 (27%), Positives = 87/172 (50%), Gaps = 8/172 (4%) Query: 228 LIFGLPTLVLIALKY--QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285 L+ GLP ++++ L Y + + G++ G F ALS AA+ ++ + Sbjct: 53 LLRGLPEIIVVLLVYFGSTELVEMLTGEYIEFGA------FGCGVFALSLIFAAYASQTL 106 Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345 R + A+P+GQ E+ ALGL+ +++PQ R +P L++Q+L LLK+++L +G Sbjct: 107 RGAIQAIPKGQWESGAALGLSKSYTFIHIVMPQVWRHALPGLSTQWLVLLKDTALVSLIG 166 Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 DL+ I T Q I IYL+++++ + + +L + E+ Sbjct: 167 VDDLMHQADLINTNTHQPFTWYGIAALIYLAVTLISQVGIRKLELRFTRFER 218 >gi|229514204|ref|ZP_04403665.1| arginine ABC transporter permease protein ArtQ [Vibrio cholerae TMA 21] gi|229348184|gb|EEO13142.1| arginine ABC transporter permease protein ArtQ [Vibrio cholerae TMA 21] Length = 229 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 50/129 (38%), Positives = 74/129 (57%), Gaps = 16/129 (12%) Query: 228 LIFGLPTLVLIALKY----QLHFDKPVLGQFNFIGGS--TVSPEFMSLYIALSCYTAAFI 281 +I GLP L+++ Y Q+ F FI G +SP F+S IALS A++ Sbjct: 56 VIRGLPELLVVLFIYFGSTQVLF---------FITGEFIEISP-FISGVIALSLIFASYA 105 Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341 ++ +R L AV RGQ EAA ALG+ A ++LPQA+R +P L +Q+L LLK+++L Sbjct: 106 SQTLRGALKAVGRGQREAASALGIPPSHAFIRIVLPQAVRHALPGLMNQWLVLLKDTALV 165 Query: 342 VAVGFADLV 350 +G DL+ Sbjct: 166 SLIGVTDLL 174 >gi|293378561|ref|ZP_06624724.1| ABC transporter, permease protein [Enterococcus faecium PC4.1] gi|292642890|gb|EFF61037.1| ABC transporter, permease protein [Enterococcus faecium PC4.1] Length = 159 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 36/128 (28%), Positives = 74/128 (57%), Gaps = 1/128 (0%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 F + IA AA+ AEI R G+ ++P+GQ EAA L L+ + +++PQ + ++ Sbjct: 29 RFEAALIAFILNYAAYFAEIFRGGIQSIPQGQYEAAQVLQLSPFQTVTKIVIPQVTKIVL 88 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 P + ++ +NL+K+SSL +G D++ G + + + ++ + + IYL+L+ ++ + Sbjct: 89 PSVGNEVINLVKDSSLIYILGLGDVMRAGKIAMERDATLLPLLGVAI-IYLTLTGILTIV 147 Query: 385 MNRLNAKI 392 M ++ K+ Sbjct: 148 MKQVEGKL 155 >gi|330825797|ref|YP_004389100.1| polar amino acid ABC transporter inner membrane subunit [Alicycliphilus denitrificans K601] gi|329311169|gb|AEB85584.1| polar amino acid ABC transporter, inner membrane subunit [Alicycliphilus denitrificans K601] Length = 220 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 42/126 (33%), Positives = 73/126 (57%), Gaps = 4/126 (3%) Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328 L +AL C +AF A+ +RSG+ +P GQ+EAA++LGL + V+LPQA+R+++ P+T Sbjct: 93 LTLALVC--SAFTADYLRSGINTIPGGQIEAALSLGLRPMRIISAVVLPQALRAVVQPMT 150 Query: 329 SQYLNLLKNSSLAVAVGFA--DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386 S + L+ ++SLA V F +L ++ I + I + +Y++ ++IA Sbjct: 151 SLLIALMLSTSLASQVPFPGRELTALVSKIATDSAAGIPAFAVAAAMYVATGLLIAWAGA 210 Query: 387 RLNAKI 392 L K+ Sbjct: 211 ALEKKV 216 >gi|308068847|ref|YP_003870452.1| Probable amino-acid ABC transporter permease protein ytmM [Paenibacillus polymyxa E681] gi|305858126|gb|ADM69914.1| Probable amino-acid ABC transporter permease protein ytmM [Paenibacillus polymyxa E681] Length = 236 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 46/176 (26%), Positives = 87/176 (49%), Gaps = 11/176 (6%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 + P+L + F LP L+ K HF P+ S P + I+ S Sbjct: 63 RGTPMLMHLLLIYFSLPLLIDAGAK---HFGWPL--------QSKDVPYMVFALISFSIT 111 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 + A+++E+VRSG+ +V +GQ+EAA A+G+T + R ++ PQA +P LT+ + +L Sbjct: 112 SGAYMSEVVRSGIQSVNKGQIEAAYAVGMTTWQVLRRIVFPQAFVVSLPNLTNSVIGMLH 171 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 S+LA V ++ + + + + +E+ + ++ L+++I + KI Sbjct: 172 GSTLAFTVSVTEIQAQAEILASTNWKYLEVYIAAALLFWGLTVLIERISGLVEKKI 227 >gi|312114909|ref|YP_004012505.1| polar amino acid ABC transporter inner membrane protein [Rhodomicrobium vannielii ATCC 17100] gi|311220038|gb|ADP71406.1| polar amino acid ABC transporter, inner membrane subunit [Rhodomicrobium vannielii ATCC 17100] Length = 214 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 41/126 (32%), Positives = 73/126 (57%), Gaps = 1/126 (0%) Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321 VSP F++ +AL+ A+ +E++ + L AV RGQ+EAA + G++ R+ R V LPQ +R Sbjct: 77 VSP-FVAGLVALALVFGAYSSEVILAALNAVERGQIEAARSFGMSPRQVFRRVRLPQMLR 135 Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 +P L + +L LLK++SL + +DL+ + T + + + IYL+++ + Sbjct: 136 FALPGLGNNWLVLLKDTSLVSVIALSDLLRETTIAVQATREPFKFYAVACVIYLAMTALS 195 Query: 382 ALFMNR 387 L + R Sbjct: 196 TLAIAR 201 >gi|302560484|ref|ZP_07312826.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Streptomyces griseoflavus Tu4000] gi|302478102|gb|EFL41195.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Streptomyces griseoflavus Tu4000] Length = 233 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 41/122 (33%), Positives = 63/122 (51%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +AL A+ AEIVR L AV Q E IAL T + +L+LLPQA+ +IPP ++ Sbjct: 88 LALGLTYGAYGAEIVRGALAAVDPAQREGGIALSFTPWQRMKLILLPQAVPEMIPPFSNL 147 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 + LLK ++L +G DL G + ++ EI + IY ++ ++ M L Sbjct: 148 LIELLKGTALVSIMGMGDLAFSGNLVRLALQESAEIYTYILLIYFVIAFLLTRSMRGLEK 207 Query: 391 KI 392 K+ Sbjct: 208 KL 209 >gi|218659451|ref|ZP_03515381.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium etli IE4771] Length = 128 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 40/124 (32%), Positives = 68/124 (54%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +AL+ + ++ + EIVR L A+P+GQ EAA A+GLT + VL PQAMR +P + Sbjct: 3 LALAIFCSSHVGEIVRGALQAIPKGQTEAAKAIGLTFTQTFTSVLWPQAMRQCLPAWVNT 62 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++K S+L +G A+L+ II++ +++ + +Y ++ I F + Sbjct: 63 AAEMVKASTLLSVIGVAELLLRTQEIISRNFMSLQFYFLAGGLYFIVNYGIEHFGKYVER 122 Query: 391 KIAL 394 K AL Sbjct: 123 KTAL 126 >gi|312963774|ref|ZP_07778245.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Pseudomonas fluorescens WH6] gi|311281809|gb|EFQ60419.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Pseudomonas fluorescens WH6] Length = 216 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 34/102 (33%), Positives = 61/102 (59%), Gaps = 1/102 (0%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G +SP +++ IAL+ +T+A++AEI R + ++ GQ EA+ +L L + R V+LPQ Sbjct: 80 GVDISP-WLAAAIALTLFTSAYLAEIWRGCVDSIAHGQWEASASLALNPLEQLRYVILPQ 138 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 A+R + P + ++K +++ +GF +L GG + N T Sbjct: 139 ALRIAVAPTVGFSVQVVKGTAVTSIIGFTELTKTGGMLANAT 180 >gi|284163417|ref|YP_003401696.1| polar amino acid ABC transporter inner membrane protein [Haloterrigena turkmenica DSM 5511] gi|284013072|gb|ADB59023.1| polar amino acid ABC transporter, inner membrane subunit [Haloterrigena turkmenica DSM 5511] Length = 339 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 53/172 (30%), Positives = 90/172 (52%), Gaps = 5/172 (2%) Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT---AAFIA 282 T LI G P L + + Y + L + IG V PE+ + +IA+ +T +A+ A Sbjct: 148 TELIRGTPLLAQLFVLYYTPYLSVRLSDVDLIGRGFV-PEY-AFWIAIVGFTINGSAYQA 205 Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342 E +R L +V GQ+ AA A+GL+ + R V+LPQ +R IP T++ + L+K SSLA Sbjct: 206 EYIRGALESVDEGQLTAARAIGLSKLEGIRHVVLPQTLRYGIPAWTNELVYLIKYSSLAG 265 Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394 + +L I + T + I ++ +Y+ L + M+R+ ++A+ Sbjct: 266 FITVPELYYRASDIASSTFEYTPIYVLLGLVYIGLVLSATNVMSRVERRVAV 317 >gi|218458226|ref|ZP_03498317.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium etli Kim 5] Length = 202 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 38/108 (35%), Positives = 61/108 (56%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IAL A+ EI+R G+ ++ +GQ+EA ALGL RL++L A+R+I P LTSQ Sbjct: 95 IALGINGGAYAIEIIRGGVESISKGQIEAGFALGLHKGDVFRLIVLKPALRAIYPSLTSQ 154 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378 ++ L +S+ ++ +L S I + T ++ E+ IYL +S Sbjct: 155 FVMLTLTTSVCTSIAAYELTSAAQRIESDTFRSFEVYFTVTAIYLVIS 202 >gi|167847334|ref|ZP_02472842.1| thiamine monophosphate kinase [Burkholderia pseudomallei B7210] Length = 373 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 36/96 (37%), Positives = 58/96 (60%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P ++ ALS A++A V +G+ A GQ +A ++LGLT + R VLLPQA+R + Sbjct: 239 PGLAAVVCALSLVGGAYLAHSVHAGIRAAGDGQWQAGLSLGLTRWQTVRHVLLPQAVRIM 298 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359 P +Q+++L+K++SLA VG +L V + N+ Sbjct: 299 TPSFVNQWVSLVKDTSLAYIVGVPELSFVATQVNNR 334 >gi|15835727|ref|NP_300251.1| ABC amino acid transporter permease [Chlamydophila pneumoniae J138] gi|8978565|dbj|BAA98402.1| ABC amino acid transporter permease [Chlamydophila pneumoniae J138] Length = 217 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 35/104 (33%), Positives = 65/104 (62%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IALS +AA++AE +R G+ ++ GQ E+A+ LG + ++ PQ ++I+P LT++ Sbjct: 92 IALSMNSAAYLAENIRGGINSLSIGQWESAMVLGYKKYQIFVYIIYPQVFKNILPSLTNE 151 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374 +++L+K SS+ + VG +L V I+++ +E+ LI +Y Sbjct: 152 FVSLIKESSILMVVGVPELTKVTKDIVSRELNPMEMYLICAGLY 195 >gi|308235036|ref|ZP_07665773.1| ABC transporter, permease protein [Gardnerella vaginalis ATCC 14018] Length = 225 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 73/216 (33%), Positives = 106/216 (49%), Gaps = 29/216 (13%) Query: 191 VFSFVLGIVLSLF------ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244 +FS +LG++L + + R+ + + K +PL I F++ G V LK Sbjct: 29 LFSTILGVILVMMRICPIHSLRIIASAYVEFFKNMPLTIIMVFMVLG----VYAQLK--- 81 Query: 245 HFDKPVLGQFNFIGGSTV-SPEFMSLYIA-LSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302 +G STV S F L IA LS YTAAF+ E +RSGL VP GQ EA A Sbjct: 82 ------------LGFSTVFSVNFFWLAIAGLSFYTAAFVCESLRSGLNTVPLGQAEACRA 129 Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS--VGGTIINQT 360 LGL ++ V+LPQ + PL + ++ LLKNS++A A A S + I Sbjct: 130 LGLNFFQSAFNVILPQTFCGSVAPLGNTFIALLKNSTVAAAASVATETSTLMSEMIERHA 189 Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 + I LI+ Y+ L I I +F L+ K+A++ Sbjct: 190 DLIVPIFLIFACGYIVLIIPIGIFTTYLSNKLAVRR 225 >gi|227878268|ref|ZP_03996232.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus crispatus JV-V01] gi|256844162|ref|ZP_05549649.1| ABC transporter [Lactobacillus crispatus 125-2-CHN] gi|256850466|ref|ZP_05555893.1| amino acid ABC transporter permease [Lactobacillus crispatus MV-1A-US] gi|262047795|ref|ZP_06020746.1| amino acid ABC transporter permease [Lactobacillus crispatus MV-3A-US] gi|293381403|ref|ZP_06627402.1| ABC transporter, permease protein [Lactobacillus crispatus 214-1] gi|312976725|ref|ZP_07788474.1| amino acid ABC transporter, permease protein [Lactobacillus crispatus CTV-05] gi|227862138|gb|EEJ69693.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus crispatus JV-V01] gi|256614067|gb|EEU19269.1| ABC transporter [Lactobacillus crispatus 125-2-CHN] gi|256712671|gb|EEU27665.1| amino acid ABC transporter permease [Lactobacillus crispatus MV-1A-US] gi|260571924|gb|EEX28494.1| amino acid ABC transporter permease [Lactobacillus crispatus MV-3A-US] gi|290922011|gb|EFD99014.1| ABC transporter, permease protein [Lactobacillus crispatus 214-1] gi|310896053|gb|EFQ45118.1| amino acid ABC transporter, permease protein [Lactobacillus crispatus CTV-05] Length = 215 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 37/128 (28%), Positives = 69/128 (53%), Gaps = 1/128 (0%) Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321 V P + + A AA+ AEI R G ++ GQ EAA L L+ + +++PQ ++ Sbjct: 82 VFPRYQAALFAFVLNYAAYFAEIFRGGFQSIDEGQFEAAKVLRLSRWQTMTKIIIPQVIK 141 Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 ++P + ++ +NL+K+SSL +G DL+ G + + + ++L+ + IYL L + Sbjct: 142 IVLPSIGNEVINLVKDSSLVYVIGLGDLLRAGNVAMARDVTLVPLVLVGV-IYLLLISIC 200 Query: 382 ALFMNRLN 389 A + +L Sbjct: 201 AFVLKKLE 208 >gi|226196429|ref|ZP_03792011.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Burkholderia pseudomallei Pakistan 9] gi|225931646|gb|EEH27651.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Burkholderia pseudomallei Pakistan 9] Length = 247 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 36/96 (37%), Positives = 58/96 (60%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P ++ ALS A++A V +G+ A GQ +A ++LGLT + R VLLPQA+R + Sbjct: 94 PGLAAVVCALSLVGGAYLAHSVHAGIRAAGDGQWQAGLSLGLTRWQTVRHVLLPQAVRIM 153 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359 P +Q+++L+K++SLA VG +L V + N+ Sbjct: 154 TPSFVNQWVSLVKDTSLAYIVGVPELSFVATQVNNR 189 >gi|222081581|ref|YP_002540945.1| amino acid ABC transporter [Agrobacterium radiobacter K84] gi|221726260|gb|ACM29349.1| amino acid ABC transporter [Agrobacterium radiobacter K84] Length = 216 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 39/111 (35%), Positives = 63/111 (56%), Gaps = 3/111 (2%) Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339 F +EI R+GL+AVPRGQ+EAA LGLT + + +PQA+R+++P L + L+KNSS Sbjct: 98 FQSEIYRAGLLAVPRGQIEAAEMLGLTAAQTFLCIEVPQAVRTMLPALVGEMQALVKNSS 157 Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA---LFMNR 387 L + D+ + T + +E + +Y+++ +A L M R Sbjct: 158 LVSVIAVMDVTRRAQQVAASTFRPLEAYASALLLYVAVGAALAGIGLLMER 208 >gi|300858067|ref|YP_003783050.1| glutamate ABC transporter permease [Corynebacterium pseudotuberculosis FRC41] gi|300685521|gb|ADK28443.1| glutamate ABC transport system permease protein [Corynebacterium pseudotuberculosis FRC41] gi|302205789|gb|ADL10131.1| glutamate ABC-type transporter, permease component [Corynebacterium pseudotuberculosis C231] gi|302330348|gb|ADL20542.1| glutamate ABC-type transporter, permease component [Corynebacterium pseudotuberculosis 1002] gi|308276024|gb|ADO25923.1| glutamate ABC-type transporter, permease component [Corynebacterium pseudotuberculosis I19] Length = 228 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 41/123 (33%), Positives = 74/123 (60%), Gaps = 3/123 (2%) Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335 YT+AF++E +RSG+ V GQ EAA +LGL+ + ++ PQA+R+ I PL + + L Sbjct: 107 YTSAFVSECLRSGINTVDFGQAEAARSLGLSFSQTFNKIIFPQAIRAAIVPLGNTLIALT 166 Query: 336 KNSSLA--VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393 KN+++A + VG A L+ + I N Q I + +++L++ + F+ L+ ++A Sbjct: 167 KNTTIASVIGVGEASLL-MKEVIENHASQLFVIFGCFALGFMALTLPMRYFLGALSTRMA 225 Query: 394 LKE 396 +K+ Sbjct: 226 VKK 228 >gi|298290397|ref|YP_003692336.1| polar amino acid ABC transporter inner membrane subunit [Starkeya novella DSM 506] gi|296926908|gb|ADH87717.1| polar amino acid ABC transporter, inner membrane subunit [Starkeya novella DSM 506] Length = 238 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 40/123 (32%), Positives = 67/123 (54%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 ++LS + A E RSGL ++P EAA +LG + R + +P A R +P LT+ Sbjct: 108 VSLSLFGGALCIEAFRSGLESLPHSVTEAARSLGYSRWARFRRIEMPIASRICLPALTNI 167 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 NL K +S A + +L+ G I N T + E++L+ + IY+SL +++ M+R+ Sbjct: 168 LTNLFKTTSQASVITVPELMYYAGQIYNDTFRTAEVMLLVLLIYVSLVSLLSWGMSRIEQ 227 Query: 391 KIA 393 +A Sbjct: 228 ALA 230 Score = 40.0 bits (92), Expect = 0.64, Method: Compositional matrix adjust. Identities = 42/150 (28%), Positives = 70/150 (46%), Gaps = 20/150 (13%) Query: 79 YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGA-GRLSANKLVAWI---CRVYVE 134 + SD Y +L G + T LA + ++ I L+GA G L+ + +AW+ ++VE Sbjct: 8 WLSDPVYQDWLLRGTLTTIGLALA----SSAIAILIGAFGALALSLRIAWLDALIELFVE 63 Query: 135 VFRNIPPLVVIFFLYKSVLSV-LPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFS 193 +FRN PPL+ + F Y ++ ++ L + D + GLS P L+ A + + Sbjct: 64 LFRNTPPLLQMLFFYFTLSTIGLRVTDPAT-----------GLSVPLLSAFDCALVSLSL 112 Query: 194 FVLGIVLSLFATRLSRHFHEKTGKALPLLY 223 F + + F + L H T A L Y Sbjct: 113 FGGALCIEAFRSGLESLPHSVTEAARSLGY 142 >gi|296157668|ref|ZP_06840502.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. Ch1-1] gi|295891914|gb|EFG71698.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. Ch1-1] Length = 219 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 55/209 (26%), Positives = 104/209 (49%), Gaps = 18/209 (8%) Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249 +F + G VL+L H + + +Y+S ++ G P LV I + +++ P Sbjct: 29 MIFGLIAGAVLALMGVS-----HSRVLNWIARIYVS--VMRGTPLLVQI---FVIYYGLP 78 Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309 +F G ++ P + IALS AA+++E +R ++ + +GQ AA +LGL+ R+ Sbjct: 79 -----SF--GISLDPTPAGV-IALSANVAAYLSESMRGAILGIHQGQWLAAYSLGLSRRQ 130 Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369 R V+ PQA+R +P L++ ++L+K++SL + +L+ II T Q + + L Sbjct: 131 TLRYVIAPQALRIAVPSLSNSLISLIKDTSLVSVITVTELLRSAQEIIASTYQPLPLYLA 190 Query: 370 WMFIYLSLSIMIALFMNRLNAKIALKEKK 398 +Y L ++ ++AL + Sbjct: 191 AAAVYWVLCQVLESVQRWYERRLALPSRH 219 Score = 37.0 bits (84), Expect = 6.2, Method: Compositional matrix adjust. Identities = 27/78 (34%), Positives = 39/78 (50%), Gaps = 4/78 (5%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151 G V T A MI I G ++ +S ++++ WI R+YV V R P LV IF +Y Sbjct: 17 GAVLTVKFAVLSMIFGLIAGAVLALMGVSHSRVLNWIARIYVSVMRGTPLLVQIFVIYYG 76 Query: 152 V----LSVLPIPDHSIVL 165 + +S+ P P I L Sbjct: 77 LPSFGISLDPTPAGVIAL 94 >gi|254518098|ref|ZP_05130154.1| amino acid permease [Clostridium sp. 7_2_43FAA] gi|226911847|gb|EEH97048.1| amino acid permease [Clostridium sp. 7_2_43FAA] Length = 224 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 51/213 (23%), Positives = 101/213 (47%), Gaps = 30/213 (14%) Query: 191 VFSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244 V S +LG++ + T ++ + ++ + +PL+ FG+PTL+ + Sbjct: 34 VLSTILGVIFGIIMTSKRKVVKVISTIYLESIRIIPLMVWLFLFYFGVPTLL------NI 87 Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304 H + ++G YI + + A I ++VR + ++P+ E+A+AL Sbjct: 88 HLESTIVG-----------------YIVFTLWGTAEIGDLVRGAITSIPKIYYESAMALS 130 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364 L K R +++P ++R ++P + + ++K ++L +G DLV VG II +T Sbjct: 131 LNKIKTYRYIIIPVSIRRVMPGIINLSTRMIKTTTLMTLIGAVDLVKVGQQIIERTVLTE 190 Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 + W++ L + + F L AK AL++K Sbjct: 191 PLASFWIYGVLLIIYFLICFPISLGAK-ALEKK 222 >gi|89258356|gb|ABD65399.1| putative amino acid ABC transporter permease protein [Ochrobactrum anthropi] Length = 254 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 59/204 (28%), Positives = 98/204 (48%), Gaps = 18/204 (8%) Query: 188 KIFVFSFVLGIVLS--LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH 245 +I + +LG+ ++ L A RLSR + L Y+S F G P LV + + L+ Sbjct: 22 QISALALILGLAVAAILVAGRLSR---SPILRGLAAAYVSVFR--GTPCLVQL---FILY 73 Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305 F P +G + P F + I L A+++E +R + +V RGQ EAA ++G Sbjct: 74 FGGPQIG-------INLEP-FAAGVIGLGLNIGAYMSESIRGAIQSVDRGQSEAARSIGF 125 Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365 + R V+LPQA R +I PL + LLK S+L + +L I T + E Sbjct: 126 GRGQTMRFVVLPQAARLMIRPLGVNAIALLKGSALVSTISVVELTYTAQRFIGSTYKPFE 185 Query: 366 IILIWMFIYLSLSIMIALFMNRLN 389 I + +Y+ + ++A ++ L+ Sbjct: 186 IFGVAAVLYMIIIYIVARGVDLLD 209 >gi|34499507|ref|NP_903722.1| amino acid ABC transporter permease [Chromobacterium violaceum ATCC 12472] gi|34105357|gb|AAQ61712.1| probable amino acid ABC transporter, permease protein [Chromobacterium violaceum ATCC 12472] Length = 220 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 37/128 (28%), Positives = 71/128 (55%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +AL+ AA+++E +R G+ V +GQ +AA +LG T + R ++ PQA+R +P L++ Sbjct: 93 LALTLNVAAYLSESLRGGIAGVAKGQWDAAFSLGFTWWQTMRHIIAPQALRLSVPSLSNS 152 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++L+K++SL + +L+ +I QT Q + + L IY LS + + Sbjct: 153 LISLIKDTSLVSVITVTELMLATKEVIAQTFQPLPLYLAAAAIYWLLSALFERLQRHVEN 212 Query: 391 KIALKEKK 398 ++ L ++ Sbjct: 213 RLNLAHQR 220 >gi|320546644|ref|ZP_08040956.1| polar amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus equinus ATCC 9812] gi|320448699|gb|EFW89430.1| polar amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus equinus ATCC 9812] Length = 213 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 32/91 (35%), Positives = 53/91 (58%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +A + AA+ AEI R G+ A+P+GQ EAA L L + ++LPQ + ++P + ++ Sbjct: 89 LAFTLNYAAYFAEIFRGGISAIPKGQYEAAKVLKLNQLQTIHYIILPQVFKIVLPSVFNE 148 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361 +NL+K+SSL +G DL+ T N+ Sbjct: 149 IINLVKDSSLVYVLGVGDLLLASKTAANRDA 179 >gi|28869033|ref|NP_791652.1| arginine/ornithine ABC transporter permease [Pseudomonas syringae pv. tomato str. DC3000] gi|28852273|gb|AAO55347.1| arginine/ornithine ABC transporter, permease protein [Pseudomonas syringae pv. tomato str. DC3000] Length = 232 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 52/167 (31%), Positives = 85/167 (50%), Gaps = 11/167 (6%) Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL----YIALSCYTA 278 ++ T++I G P LV + L Y L QF + S + P S +A + T+ Sbjct: 56 WLYTYVIRGTPMLVQLFLIYY------GLAQFAAVRESFLWPWLSSATFCACLAFAINTS 109 Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338 A+ AEI+ L A P G++EAA A+G++ K R +LLP A+R +P +++ + +L+ + Sbjct: 110 AYTAEIIAGSLKATPAGEIEAARAMGMSKVKMYRRILLPSALRRALPQYSNEVIMMLQTT 169 Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS-IMIALF 384 SLA V D+ T+ Q E + YL L+ I++ LF Sbjct: 170 SLASIVTLIDITGAARTVNAQFYLPFEAYVTAGVFYLCLTFILVRLF 216 >gi|330879703|gb|EGH13852.1| arginine/ornithine ABC transporter permease [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 232 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 52/167 (31%), Positives = 84/167 (50%), Gaps = 11/167 (6%) Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL----YIALSCYTA 278 ++ T++I G P LV + L Y L QF + S P S +A + T+ Sbjct: 56 WLYTYVIRGTPMLVQLFLIYY------GLAQFAAVRESFFWPWLSSATFCACLAFAINTS 109 Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338 A+ AEI+ L A P G++EAA A+G++ K R +LLP A+R +P +++ + +L+ + Sbjct: 110 AYTAEIIAGSLKATPAGEIEAARAMGMSKAKMYRRILLPSALRRALPQYSNEVIMMLQTT 169 Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS-IMIALF 384 SLA V D+ T+ Q E + YL L+ I++ LF Sbjct: 170 SLASIVTLIDITGAARTVNAQFYLPFEAYVTAGVFYLCLTFILVRLF 216 >gi|283954241|ref|ZP_06371765.1| LOW QUALITY PROTEIN: polar amino acid transport system permease protein [Campylobacter jejuni subsp. jejuni 414] gi|283794259|gb|EFC33004.1| LOW QUALITY PROTEIN: polar amino acid transport system permease protein [Campylobacter jejuni subsp. jejuni 414] Length = 449 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 49/194 (25%), Positives = 97/194 (50%), Gaps = 14/194 (7%) Query: 191 VFSFVLG---IVLSLFATRLSRH---FHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244 +FS ++G I++ F ++ + + + + PLL FL + LP K+ + Sbjct: 29 IFSLIIGLFCILMGYFKIKILENICKLYIEFSRNTPLLIQLFFLYYALP-------KFNI 81 Query: 245 HFDK-PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 H ++ P L T+ P F + LS +++AE +R+G A+ + Q EA +AL Sbjct: 82 HLEQIPPLNLICLSVEETLRPSFACAIVGLSFLGGSYMAESLRAGFEAIKKQQFEAGLAL 141 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363 G + R V+LPQA+ +P +++ + L+K +S+ + DLV++ ++ + T + Sbjct: 142 GFSKFGNLRYVILPQALAISMPSISANIIFLIKETSVVSIIALPDLVNLMKSLNSLTYKT 201 Query: 364 IEIILIWMFIYLSL 377 E++ + YL + Sbjct: 202 DELLFLLFMGYLCI 215 Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 38/125 (30%), Positives = 67/125 (53%), Gaps = 4/125 (3%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I S + + ++VR L ++P+ Q E+A +LGL ++ V++PQA+R + P + Sbjct: 323 IVFSIWGCFEMMDLVRISLQSIPKHQYESASSLGLNTVQSFVYVIIPQAVRRLTPMSMNL 382 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTII---NQTGQAIEIIL-IWMFIYLSLSIMIALFMN 386 ++K+++ A +G +LV VG II N+ A II + FI+ +L I L+ Sbjct: 383 LTRMIKSTTFAYLIGAVELVKVGQQIIEFHNRNDFAPFIIYGLIFFIFFTLCYPITLYSR 442 Query: 387 RLNAK 391 +L K Sbjct: 443 KLEKK 447 >gi|257063425|ref|YP_003143097.1| amino acid ABC transporter membrane protein [Slackia heliotrinireducens DSM 20476] gi|256791078|gb|ACV21748.1| amino acid ABC transporter membrane protein [Slackia heliotrinireducens DSM 20476] Length = 220 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 32/99 (32%), Positives = 60/99 (60%), Gaps = 4/99 (4%) Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 +A+ EI RSG+ ++PRGQ EAA LG T + ++LPQ ++ I+P + ++ + L+K+ Sbjct: 102 SAYFGEIYRSGIQSIPRGQYEAAEVLGYTKVQTFMYIILPQVIKRILPAMGNEIIALVKD 161 Query: 338 SSLAVAVGFADLVSVGGTI----INQTGQAIEIILIWMF 372 +SLA +G A++ + + ++ AI ++ W+F Sbjct: 162 TSLAFVLGVAEMFTFAKALAAKHVSMLPYAIAAVIYWIF 200 >gi|163856555|ref|YP_001630853.1| glutamine ABC transporter permease protein [Bordetella petrii DSM 12804] gi|163260283|emb|CAP42585.1| glutamine transport system permease protein [Bordetella petrii] Length = 219 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 61/192 (31%), Positives = 97/192 (50%), Gaps = 14/192 (7%) Query: 177 SFPTLTMDT--NAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234 S P L T KI + V G +L A ++R + + A+ +YI+ +I G P Sbjct: 11 SMPNLLDGTLMTVKITFWGLVGGFLLGALAG-VARAYGPRLLSAIAQVYIA--VIRGTPI 67 Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294 +V + Y F P++ + G V + ++ L + A+IAEIVR L++V + Sbjct: 68 VVQVMFIY---FALPLM-----VPGLRVDAIWAAIA-TLIINSGAYIAEIVRGSLLSVHK 118 Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354 G EA A+GL K ++ P A R +IPPL +Q + LK+SSL + +G A+L G Sbjct: 119 GLKEAGQAMGLPFYKILLHIIGPVAFRRMIPPLGNQCIISLKDSSLFIVIGVAELTRQGQ 178 Query: 355 TIINQTGQAIEI 366 I+ +A+EI Sbjct: 179 EIMASNFRAVEI 190 Score = 36.2 bits (82), Expect = 8.8, Method: Compositional matrix adjust. Identities = 19/61 (31%), Positives = 34/61 (55%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G + T + F G++ ++G L G R +L++ I +VY+ V R P +V + F+ Sbjct: 15 LLDGTLMTVKITFWGLVGGFLLGALAGVARAYGPRLLSAIAQVYIAVIRGTPIVVQVMFI 74 Query: 149 Y 149 Y Sbjct: 75 Y 75 >gi|111221812|ref|YP_712606.1| amino acid ABC transporter membrane protein [Frankia alni ACN14a] gi|111149344|emb|CAJ61032.1| putative amino acid transport protein (ABC superfamily, membrane) [Frankia alni ACN14a] Length = 248 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 45/134 (33%), Positives = 73/134 (54%), Gaps = 21/134 (15%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 + LP++ + + FG+P L L L P++ +GG+ AL Sbjct: 69 RGLPVILVLYLVGFGVPALRLRGLP-----TDPLV-----LGGA-----------ALVLT 107 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 +A++AE+ R+G+ +V Q+ AA +LGLTH + R V+LPQA+R + PPL + ++L K Sbjct: 108 YSAYVAEVFRAGIESVHPSQVAAARSLGLTHAQTMRRVVLPQAVRRVTPPLLNDAISLQK 167 Query: 337 NSSLAVAVGFADLV 350 +SSL +G D V Sbjct: 168 DSSLVSVLGVVDAV 181 >gi|153829863|ref|ZP_01982530.1| arginine ABC transporter, permease protein [Vibrio cholerae 623-39] gi|148874664|gb|EDL72799.1| arginine ABC transporter, permease protein [Vibrio cholerae 623-39] Length = 229 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 50/129 (38%), Positives = 74/129 (57%), Gaps = 16/129 (12%) Query: 228 LIFGLPTLVLIALKY----QLHFDKPVLGQFNFIGGS--TVSPEFMSLYIALSCYTAAFI 281 +I GLP L+++ Y Q+ F FI G +SP F+S IALS A++ Sbjct: 56 VIRGLPELLVVLFIYFGSTQVLF---------FITGEFIEISP-FISGVIALSLIFASYA 105 Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341 ++ +R L AV RGQ EAA ALG+ A ++LPQA+R +P L +Q+L LLK+++L Sbjct: 106 SQTLRGALKAVGRGQREAASALGIPPSHAFIRIVLPQAVRHALPGLMNQWLVLLKDTALV 165 Query: 342 VAVGFADLV 350 +G DL+ Sbjct: 166 SLIGVTDLL 174 >gi|91787333|ref|YP_548285.1| amino acid ABC transporter permease [Polaromonas sp. JS666] gi|91696558|gb|ABE43387.1| amino acid ABC transporter membrane protein, PAAT family [Polaromonas sp. JS666] Length = 216 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 52/164 (31%), Positives = 86/164 (52%), Gaps = 11/164 (6%) Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287 L+ G+P +V++ + L+F P +G I S + + L IA S Y A E R+ Sbjct: 61 LLRGIPIIVIL---FFLYFVMPDVG----ISLSALQAGILGLGIAYSAYQA----ENFRA 109 Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347 G+ AV GQ+EAA A+G++ R V+LPQA++ ++PP + + +LK+SS A + A Sbjct: 110 GIEAVDHGQVEAARAMGMSWGLMMRRVVLPQAVKIVLPPYGNIMIMMLKDSSQASTITVA 169 Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 +L G I T Q + + IYL + + + L + L + Sbjct: 170 ELALQGKMIATSTFQNATVFTLVALIYLVMCVPLILLVRHLEKR 213 >gi|76809245|ref|YP_333449.1| putative amino acid transport system, membrane protein [Burkholderia pseudomallei 1710b] gi|126440194|ref|YP_001058921.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Burkholderia pseudomallei 668] gi|126451643|ref|YP_001066164.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Burkholderia pseudomallei 1106a] gi|134282328|ref|ZP_01769033.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Burkholderia pseudomallei 305] gi|217421609|ref|ZP_03453113.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Burkholderia pseudomallei 576] gi|242317304|ref|ZP_04816320.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Burkholderia pseudomallei 1106b] gi|254188734|ref|ZP_04895245.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Burkholderia pseudomallei Pasteur 52237] gi|254198163|ref|ZP_04904585.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Burkholderia pseudomallei S13] gi|254260903|ref|ZP_04951957.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Burkholderia pseudomallei 1710a] gi|76578698|gb|ABA48173.1| putative amino acid transport system, membrane protein [Burkholderia pseudomallei 1710b] gi|126219687|gb|ABN83193.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Burkholderia pseudomallei 668] gi|126225285|gb|ABN88825.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Burkholderia pseudomallei 1106a] gi|134246366|gb|EBA46455.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Burkholderia pseudomallei 305] gi|157936413|gb|EDO92083.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Burkholderia pseudomallei Pasteur 52237] gi|169654904|gb|EDS87597.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Burkholderia pseudomallei S13] gi|217395351|gb|EEC35369.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Burkholderia pseudomallei 576] gi|242140543|gb|EES26945.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Burkholderia pseudomallei 1106b] gi|254219592|gb|EET08976.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Burkholderia pseudomallei 1710a] Length = 247 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 36/96 (37%), Positives = 58/96 (60%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P ++ ALS A++A V +G+ A GQ +A ++LGLT + R VLLPQA+R + Sbjct: 94 PGLAAVVCALSLVGGAYLAHSVHAGIRAAGDGQWQAGLSLGLTRWQTVRHVLLPQAVRIM 153 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359 P +Q+++L+K++SLA VG +L V + N+ Sbjct: 154 TPSFVNQWVSLVKDTSLAYIVGVPELSFVATQVNNR 189 >gi|116050135|ref|YP_791048.1| amino acid ABC transporter permease [Pseudomonas aeruginosa UCBPP-PA14] gi|296389385|ref|ZP_06878860.1| amino acid ABC transporter permease [Pseudomonas aeruginosa PAb1] gi|313110964|ref|ZP_07796804.1| putative amino acid permease [Pseudomonas aeruginosa 39016] gi|115585356|gb|ABJ11371.1| putative amino acid transport system permease [Pseudomonas aeruginosa UCBPP-PA14] gi|310883306|gb|EFQ41900.1| putative amino acid permease [Pseudomonas aeruginosa 39016] Length = 225 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 35/97 (36%), Positives = 59/97 (60%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P ++ ALS A++A V +G+ ++P GQ AA ALGL + RLV+LPQA+ + Sbjct: 94 PALATVVCALSLIGGAYLAHSVYAGIHSLPAGQWAAARALGLRPWQVLRLVILPQALPVM 153 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 +P +Q+++L+K++SLA +G +L V + N+ Sbjct: 154 LPSFLNQWVSLIKDTSLAYVIGVGELSFVATQVSNRV 190 >gi|330957731|gb|EGH57991.1| amino acid ABC transporter permease [Pseudomonas syringae pv. maculicola str. ES4326] Length = 242 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 53/156 (33%), Positives = 79/156 (50%), Gaps = 8/156 (5%) Query: 224 ISTFLIFGLPTLVLIALK-YQLHFDKPVLG---QFNFIGGSTVSPEFMSLYIALSCYTAA 279 I T LI G+P LVL+ L Y L +L ++ +I ++P F + I L A Sbjct: 65 IYTTLIRGIPDLVLMLLIFYSLQTWLTMLTDAMEWEYI---EINP-FGAGVITLGFIYGA 120 Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339 + E R +++VPRGQ+EAA A GL + R V+ PQ MR +P + + + LLK ++ Sbjct: 121 YFTETFRGAILSVPRGQIEAATAYGLKRGQRFRYVVFPQMMRYALPGIGNNWQVLLKATA 180 Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375 L +G ADLV T Q +++ IYL Sbjct: 181 LVSIIGLADLVKASQDAGKSTYQLFYFLVLAALIYL 216 >gi|257870688|ref|ZP_05650341.1| polar amino acid ABC transporter [Enterococcus gallinarum EG2] gi|257804852|gb|EEV33674.1| polar amino acid ABC transporter [Enterococcus gallinarum EG2] Length = 214 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 54/206 (26%), Positives = 102/206 (49%), Gaps = 31/206 (15%) Query: 193 SFVLGIVLS-LFATRLS-----RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246 S LGI+L+ + A+RL + + PLL F+ +GLP L ++ F Sbjct: 30 SIPLGIILAFILASRLRILKAIVQVYVWLMRGTPLLLQLIFVFYGLPILNIV-------F 82 Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306 D+ F + IA AA+ AEI R G+ ++P GQ EAA L L Sbjct: 83 DR-----------------FEAALIAFIINYAAYYAEIFRGGIQSIPAGQYEAAKVLRLA 125 Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 + R +++PQ ++ +P + ++ +NL+K++SL +G +D++ +G + + + + Sbjct: 126 PLQTIRKIIIPQVVKITLPSVGNEVINLVKDTSLVYILGLSDVMRIGKIAMERDSTLVPL 185 Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKI 392 + + + IYL ++ + L + +L K+ Sbjct: 186 LGVAL-IYLMMTGIFTLILKQLETKL 210 >gi|153954685|ref|YP_001395450.1| hypothetical protein CKL_2067 [Clostridium kluyveri DSM 555] gi|146347543|gb|EDK34079.1| Hypothetical protein CKL_2067 [Clostridium kluyveri DSM 555] Length = 253 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 56/208 (26%), Positives = 105/208 (50%), Gaps = 11/208 (5%) Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247 +I FS V+ +V+ + T ++ K + + +YIS + G P +V + L + Sbjct: 40 EILFFSVVIALVVGMILT-YAKVGKNKVVRCIASIYIS--FMRGTPMIVQLLLAF---IG 93 Query: 248 KPVLGQFNFIGGSTVS-PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306 P++ + G ST + + IA S AAF AEI RS + + +GQ+EA ++G+T Sbjct: 94 IPLI--LDSFGISTANWNNIIYAIIAFSLNEAAFFAEIFRSAYLDIDKGQIEAGQSIGMT 151 Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI-INQTG-QAI 364 + R ++ Q +P T+ + L+KN+SL +A+G DL+ + I N G Sbjct: 152 KFQTFRRIIFVQVAAKALPNTTNMIIELMKNTSLGIAIGVTDLMGMAKQISYNNYGVGQT 211 Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKI 392 E ++ FIY + +++ + + + A++ Sbjct: 212 ETFIVAAFIYWIMGLILTIVSSNITARL 239 >gi|126434726|ref|YP_001070417.1| polar amino acid ABC transporter, inner membrane subunit [Mycobacterium sp. JLS] gi|126234526|gb|ABN97926.1| amino acid ABC transporter membrane protein 2, PAAT family [Mycobacterium sp. JLS] Length = 292 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 42/118 (35%), Positives = 72/118 (61%) Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 L+ Y A IAEIVR+G+ A+PRGQ EAA ALGL + R +LLPQA+ S++P L SQ Sbjct: 146 GLTLYNGAVIAEIVRAGVKALPRGQAEAASALGLRWGQTQRSILLPQAVTSMLPVLVSQL 205 Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 + +LK++++ + F ++V G + + G I +++ + +S++ ++ +L Sbjct: 206 VVVLKDTAIGYQITFVEMVRQGTVVGSSYGNYIPALMVIAVLMISVNFALSALATKLE 263 Score = 46.2 bits (108), Expect = 0.009, Method: Compositional matrix adjust. Identities = 37/128 (28%), Positives = 63/128 (49%), Gaps = 19/128 (14%) Query: 23 RVHNISVQIILALLLTVIFLWCVNNVYNNME-KSNLSLGIGFLSERAGFEIDQGIVPYTS 81 R N+ + +I L +T + +W V Y+ ++ K L+ A +E P+ + Sbjct: 15 RRRNVVITLI-TLAITALIVWVV---YSRLDAKGQLT--------AAKWE------PFLT 56 Query: 82 DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141 + + T +L G T A ++ A I+G +G GRLS + W+C V VE FR +P Sbjct: 57 PNLWTTYVLPGVQGTLTAAAVSIVLALILGFGLGVGRLSVITPIRWVCAVIVEFFRAVPV 116 Query: 142 LVVIFFLY 149 L+++ F Y Sbjct: 117 LIMMIFAY 124 >gi|15597398|ref|NP_250892.1| amino acid permease [Pseudomonas aeruginosa PAO1] gi|107101629|ref|ZP_01365547.1| hypothetical protein PaerPA_01002673 [Pseudomonas aeruginosa PACS2] gi|218891845|ref|YP_002440712.1| putative amino acid permease [Pseudomonas aeruginosa LESB58] gi|254235228|ref|ZP_04928551.1| hypothetical protein PACG_01119 [Pseudomonas aeruginosa C3719] gi|254240624|ref|ZP_04933946.1| hypothetical protein PA2G_01283 [Pseudomonas aeruginosa 2192] gi|9948224|gb|AAG05590.1|AE004646_11 probable amino acid permease [Pseudomonas aeruginosa PAO1] gi|126167159|gb|EAZ52670.1| hypothetical protein PACG_01119 [Pseudomonas aeruginosa C3719] gi|126194002|gb|EAZ58065.1| hypothetical protein PA2G_01283 [Pseudomonas aeruginosa 2192] gi|218772071|emb|CAW27850.1| probable amino acid permease [Pseudomonas aeruginosa LESB58] Length = 225 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 35/97 (36%), Positives = 59/97 (60%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P ++ ALS A++A V +G+ ++P GQ AA ALGL + RLV+LPQA+ + Sbjct: 94 PALATVVCALSLIGGAYLAHSVYAGIHSLPAGQWAAARALGLRPWQVLRLVILPQALPVM 153 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 +P +Q+++L+K++SLA +G +L V + N+ Sbjct: 154 LPSFLNQWVSLIKDTSLAYVIGVGELSFVATQVSNRV 190 >gi|195978013|ref|YP_002123257.1| amino acid ABC transporter membrane-spanning permease [Streptococcus equi subsp. zooepidemicus MGCS10565] gi|195974718|gb|ACG62244.1| amino acid ABC transporter membrane-spanning permease [Streptococcus equi subsp. zooepidemicus MGCS10565] Length = 209 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 33/91 (36%), Positives = 53/91 (58%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +A + AA+ AEI R G+ +P GQ EAA L L+ + R V+LPQ + ++P + ++ Sbjct: 85 LAFTLNYAAYFAEIFRGGIETIPNGQYEAAKVLKLSPVQTVRYVILPQVFKIVLPSVFNE 144 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361 +NL+K+SSL +G DL+ T N+ Sbjct: 145 VINLVKDSSLVYVLGVGDLLLASKTAANRDA 175 >gi|325836760|ref|ZP_08166227.1| ABC transporter, permease protein [Turicibacter sp. HGF1] gi|325491138|gb|EGC93427.1| ABC transporter, permease protein [Turicibacter sp. HGF1] Length = 225 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 51/190 (26%), Positives = 95/190 (50%), Gaps = 13/190 (6%) Query: 183 MDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY 242 + +I + S ++ +VL L L R K + + LY++T I +P LVL+ L Y Sbjct: 22 LGVTLEISLISVMISVVLGLVMGMLMR-VKTKVVRLICRLYLNTVRI--VPQLVLLFLAY 78 Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302 K G +S E S+ + S + A + ++VR L ++P+ Q E A+A Sbjct: 79 -FGLSKSF--------GINLSGEVASI-LVFSFWGIAEMGDLVRGALDSIPKHQYETALA 128 Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362 +GL R+ + +++PQ +R ++P + ++K +SL V +G ++V VG II + Sbjct: 129 IGLNQRQIYQYIIIPQTIRRLLPQTINLVTRIIKTTSLIVLIGVVEVVKVGQQIIEASRL 188 Query: 363 AIEIILIWMF 372 + +W++ Sbjct: 189 TVPTAALWIY 198 >gi|261820368|ref|YP_003258474.1| polar amino acid ABC transporter inner membrane protein [Pectobacterium wasabiae WPP163] gi|261604381|gb|ACX86867.1| polar amino acid ABC transporter, inner membrane subunit [Pectobacterium wasabiae WPP163] Length = 249 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 41/116 (35%), Positives = 68/116 (58%), Gaps = 1/116 (0%) Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321 VSP F + IALS AF+AEI+R+G+ AVPR +EAA +LG +A ++LP A R Sbjct: 113 VSP-FQFVVIALSLQYGAFVAEILRAGIEAVPRTTVEAAESLGYNRPRAMIHIILPLAFR 171 Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377 + +P L + ++K+++LA A+ + + V I + +E++ + + YL L Sbjct: 172 TSLPALGNNMAQIVKSTALAYAIAVPEALYVAHEIWTEHFNVLEMMNVVLLSYLGL 227 >gi|315640083|ref|ZP_07895208.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus italicus DSM 15952] gi|315484211|gb|EFU74682.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus italicus DSM 15952] Length = 536 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 30/81 (37%), Positives = 53/81 (65%) Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 +S T A+++EIVR G+ AV +GQ EAA A+G+ HR+ V+LPQ +R+I+P + ++ + Sbjct: 400 VSINTGAYMSEIVRGGIFAVDKGQFEAAQAIGMNHRQTMTKVVLPQVLRNILPAIGNETV 459 Query: 333 NLLKNSSLAVAVGFADLVSVG 353 +K++++ + DL G Sbjct: 460 INIKDTAVLSVISVTDLFFAG 480 >gi|268608242|ref|ZP_06141969.1| polar amino acid ABC transporter, inner membrane subunit [Ruminococcus flavefaciens FD-1] Length = 164 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 38/141 (26%), Positives = 77/141 (54%), Gaps = 4/141 (2%) Query: 247 DKPVLGQFNFIGGSTVSPE---FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 D P Q NF+ G + + F + +A AA+ AEI R G+ +VP GQ EAA AL Sbjct: 14 DVPXFLQ-NFLNGIDIKTDTYTFRMILVAFVLNYAAYFAEIFRGGIESVPIGQYEAAGAL 72 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363 G + + ++LPQ ++ ++P +++ + L+K++SLA A+ + +++ + + Sbjct: 73 GFSRTQTFFRIILPQVIKRVVPASSNEIITLVKDTSLASAIPYMEVMYIAKKQVPTYASL 132 Query: 364 IEIILIWMFIYLSLSIMIALF 384 + + + +F ++ +++ LF Sbjct: 133 MPLFMAGLFYFIFATVLTLLF 153 >gi|161524064|ref|YP_001579076.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia multivorans ATCC 17616] gi|189351175|ref|YP_001946803.1| polar amino acid transporter permease [Burkholderia multivorans ATCC 17616] gi|160341493|gb|ABX14579.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia multivorans ATCC 17616] gi|189335197|dbj|BAG44267.1| polar amino acid transport system permease protein [Burkholderia multivorans ATCC 17616] Length = 229 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 50/164 (30%), Positives = 86/164 (52%), Gaps = 17/164 (10%) Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLI-----ALKYQLHFD 247 SF+LG+V + A +LSR+ + + +Y T LI G+P LVL+ +L+ L+ Sbjct: 28 SFLLGLVGA--AAKLSRN---RIANGVGTVY--TTLIRGVPDLVLMLLLFYSLQIWLNMA 80 Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307 LG + P F++ + L A+ E R ++VPRGQ+EA A G+T+ Sbjct: 81 TDALGWDQI----DIDP-FLAGVLVLGFIYGAYFTETFRGAFLSVPRGQLEAGSAYGMTN 135 Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 + ++ PQ MR +P + + + L+K+++L +G AD+V Sbjct: 136 WQVFTRIMFPQMMRFALPGIGNNWQVLVKSTALVSIIGLADVVK 179 >gi|70730425|ref|YP_260166.1| amino acid ABC transporter permease [Pseudomonas fluorescens Pf-5] gi|68344724|gb|AAY92330.1| amino acid ABC transporter, permease protein [Pseudomonas fluorescens Pf-5] Length = 241 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 47/128 (36%), Positives = 67/128 (52%), Gaps = 2/128 (1%) Query: 226 TFLIFGLPTLVLIALK-YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284 T LI G+P LVL+ L Y L L + + P F++ + L A+ E Sbjct: 66 TTLIRGVPDLVLMLLIFYSLQGWLTALTELLDWPYMEIDP-FVAGIVTLGFIYGAYFTET 124 Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344 R +++VPRGQ EAA A GL+ + R V+ PQ MR +P L + +L LLK ++L + Sbjct: 125 FRGAILSVPRGQQEAAAAFGLSRMQRFRHVVFPQMMRFALPSLGNNWLVLLKATALVSII 184 Query: 345 GFADLVSV 352 G DLV V Sbjct: 185 GLTDLVKV 192 >gi|284032886|ref|YP_003382817.1| polar amino acid ABC transporter inner membrane subunit [Kribbella flavida DSM 17836] gi|283812179|gb|ADB34018.1| polar amino acid ABC transporter, inner membrane subunit [Kribbella flavida DSM 17836] Length = 293 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 30/80 (37%), Positives = 54/80 (67%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +AL ++++AE+ R+G+ ++ Q AA +LGL+HR+ R V+LPQA+R ++PPL + Sbjct: 163 VALVLTYSSYVAEVFRAGIESIHPSQRAAARSLGLSHRQTLRFVVLPQAVRRVLPPLLND 222 Query: 331 YLNLLKNSSLAVAVGFADLV 350 +++L K+S L +G D + Sbjct: 223 FVSLQKDSGLIAVLGVIDAI 242 >gi|224371423|ref|YP_002605587.1| GltK2 [Desulfobacterium autotrophicum HRM2] gi|223694140|gb|ACN17423.1| GltK2 [Desulfobacterium autotrophicum HRM2] Length = 221 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 45/168 (26%), Positives = 87/168 (51%), Gaps = 10/168 (5%) Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290 G+P +++I + ++F PV F+G S E ++ ++ Y AA+ AEI+R+G+ Sbjct: 62 GIPLILVI---FWIYFLVPV-----FLGRSL--GELPAVVLSFILYEAAYFAEIIRAGIQ 111 Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 AVP GQ A +A GL T V+LPQA+ ++P L + + + +++SLA +G + + Sbjct: 112 AVPVGQKRAGLATGLRPWDLTVHVILPQALSKMVPALITHCVVVFQDTSLAYVIGLREFL 171 Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 + + +++E+ L +Y + + + + L + KE Sbjct: 172 RRVNLVDAREARSVELYLFAACVYFIICTLGSFLGHYLEHRSKAKEAS 219 Score = 41.6 bits (96), Expect = 0.21, Method: Compositional matrix adjust. Identities = 22/58 (37%), Positives = 35/58 (60%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 G TF +A + + G L+G GRLS+ +LV + +Y+ FR IP ++VIF++Y Sbjct: 16 GLWLTFEIAVMAITGGLVWGILLGLGRLSSIRLVYYPASIYIHFFRGIPLILVIFWIY 73 >gi|256832816|ref|YP_003161543.1| polar amino acid ABC transporter, inner membrane subunit [Jonesia denitrificans DSM 20603] gi|256686347|gb|ACV09240.1| polar amino acid ABC transporter, inner membrane subunit [Jonesia denitrificans DSM 20603] Length = 224 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 33/67 (49%), Positives = 45/67 (67%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 ++LS Y A+F E +RSG+ VP GQ EAA A+GL+ A RLV++PQA R I PL + Sbjct: 98 LSLSVYHASFFCEAIRSGVNTVPVGQAEAARAIGLSFLPAARLVIMPQAFRGAIAPLGNT 157 Query: 331 YLNLLKN 337 + L+KN Sbjct: 158 IIALIKN 164 >gi|167903853|ref|ZP_02491058.1| polar amino acid uptake ABC transporter, PAAT family, permease protein [Burkholderia pseudomallei NCTC 13177] Length = 219 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 57/211 (27%), Positives = 104/211 (49%), Gaps = 14/211 (6%) Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247 K V S VLG+++ L L R + A+ Y+S L+ G P LV + + +++ Sbjct: 23 KFAVASMVLGLIVGLLVA-LVRIGSNRLLSAIAQGYVS--LMRGTPLLVQM---FVVYYG 76 Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307 P +G ++ P ++ L+ A+++E +R ++ + RGQ A+ +LGLTH Sbjct: 77 LPDIG-------ISLDPTAAGIF-TLTLNAGAYLSESMRGAILGIGRGQWAASHSLGLTH 128 Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367 + R V+ PQA+ +P L + ++L+K++SL + +L+ +I T Q + + Sbjct: 129 VQTLRHVICPQALCLAVPSLGNTLISLIKDTSLVSVITVTELLRSTQEVIASTFQPLPLY 188 Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 L IY LS ++A R+ + AL Sbjct: 189 LAAAAIYWVLSTLLARLQGRIETRCALPSAH 219 Score = 37.7 bits (86), Expect = 3.5, Method: Compositional matrix adjust. Identities = 28/96 (29%), Positives = 45/96 (46%), Gaps = 12/96 (12%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151 G T A + M+ I+G LV R+ +N+L++ I + YV + R P LV +F +Y Sbjct: 17 GAALTMKFAVASMVLGLIVGLLVALVRIGSNRLLSAIAQGYVSLMRGTPLLVQMFVVYYG 76 Query: 152 VLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187 +PD G+ L+ TLT++ A Sbjct: 77 ------LPD------IGISLDPTAAGIFTLTLNAGA 100 >gi|329124092|ref|ZP_08252639.1| arginine ABC superfamily ATP binding cassette transporter, permease protein [Haemophilus aegyptius ATCC 11116] gi|327467517|gb|EGF13015.1| arginine ABC superfamily ATP binding cassette transporter, permease protein [Haemophilus aegyptius ATCC 11116] Length = 221 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 47/172 (27%), Positives = 87/172 (50%), Gaps = 8/172 (4%) Query: 228 LIFGLPTLVLIALKY--QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285 L+ GLP ++++ L Y + + G++ G F ALS AA+ ++ + Sbjct: 53 LLRGLPEIIVVLLVYFGSTELVEMLTGEYIEFGA------FGCGVFALSLIFAAYASQTL 106 Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345 R + A+P+GQ E+ ALGL+ +++PQ R +P L++Q+L LLK+++L +G Sbjct: 107 RGAIQAIPKGQWESGAALGLSKSYTFIHIVMPQVWRHALPGLSNQWLVLLKDTALVSLIG 166 Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 DL+ I T Q I IYL+++++ + + +L + E+ Sbjct: 167 VDDLMRQADLINTNTHQPFTWYGIAALIYLAVTLISQVGIRKLELRFTRFER 218 >gi|222152717|ref|YP_002561893.1| amino acid ABC transporter permease [Streptococcus uberis 0140J] gi|222113529|emb|CAR41315.1| putative amino acid ABC transporter, permease protein [Streptococcus uberis 0140J] Length = 215 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 39/126 (30%), Positives = 71/126 (56%), Gaps = 4/126 (3%) Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 A + +T+A +AEI+R GL V GQ EA +A G + + L++ PQA R ++P + SQ+ Sbjct: 87 AFTVFTSAALAEIIRGGLNGVDAGQTEAGLAQGFSASQVFLLIVFPQAYRKMLPAIISQF 146 Query: 332 LNLLKNSSLAVAV-GFADLVSVGGTIINQTGQAIEIILIW---MFIYLSLSIMIALFMNR 387 + ++K++SL +V +L ++ + QA ++ ++ FIY ++ +I+ R Sbjct: 147 VTVIKDTSLLYSVIAIQELFGKSQILMGKYFQAEQVFALYALITFIYFVINFIISSLSRR 206 Query: 388 LNAKIA 393 L K A Sbjct: 207 LAKKWA 212 >gi|212716944|ref|ZP_03325072.1| hypothetical protein BIFCAT_01888 [Bifidobacterium catenulatum DSM 16992] gi|212660229|gb|EEB20804.1| hypothetical protein BIFCAT_01888 [Bifidobacterium catenulatum DSM 16992] Length = 380 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 34/98 (34%), Positives = 62/98 (63%), Gaps = 2/98 (2%) Query: 254 FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313 F F G SP + ++ +AL Y + +AE+VRSG+ +P GQ EA++ALGLT ++ Sbjct: 134 FAFAG--LASPAYWAVVLALVIYNGSVVAELVRSGVGNLPNGQREASLALGLTRTQSLME 191 Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 + +PQA+ +++P +Q + +LK+++L + + DL+ Sbjct: 192 IEVPQAIYAMLPAAVTQLVVVLKDTALGSIIMYTDLLQ 229 >gi|269121061|ref|YP_003309238.1| polar amino acid ABC transporter inner membrane subunit [Sebaldella termitidis ATCC 33386] gi|268614939|gb|ACZ09307.1| polar amino acid ABC transporter, inner membrane subunit [Sebaldella termitidis ATCC 33386] Length = 239 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 30/85 (35%), Positives = 57/85 (67%) Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315 FI V +F+ I ++A+++EI+RSG+ ++ +GQMEAA ALG+ + + ++ Sbjct: 100 FILSGVVQSKFLIAVIGFGINSSAYVSEIIRSGIESLDKGQMEAARALGMPYSMSMFEII 159 Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSL 340 +PQA+R+I+P L ++++ L K +S+ Sbjct: 160 IPQAVRNILPALINEFIALFKETSV 184 >gi|51595218|ref|YP_069409.1| amino acid ABC transporter, permease protein [Yersinia pseudotuberculosis IP 32953] gi|153949446|ref|YP_001402148.1| amino acid ABC transporter permease [Yersinia pseudotuberculosis IP 31758] gi|170025544|ref|YP_001722049.1| polar amino acid ABC transporter inner membrane subunit [Yersinia pseudotuberculosis YPIII] gi|186894235|ref|YP_001871347.1| polar amino acid ABC transporter inner membrane subunit [Yersinia pseudotuberculosis PB1/+] gi|51588500|emb|CAH20108.1| putative amino acid ABC transporter, permease protein [Yersinia pseudotuberculosis IP 32953] gi|152960941|gb|ABS48402.1| amino acid ABC transporter, permease protein [Yersinia pseudotuberculosis IP 31758] gi|169752078|gb|ACA69596.1| polar amino acid ABC transporter, inner membrane subunit [Yersinia pseudotuberculosis YPIII] gi|186697261|gb|ACC87890.1| polar amino acid ABC transporter, inner membrane subunit [Yersinia pseudotuberculosis PB1/+] Length = 217 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 37/108 (34%), Positives = 62/108 (57%), Gaps = 1/108 (0%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G VSP + + +AL+ +T+AF+ +I + A+P+GQ EA+ LGL+ + V+ PQ Sbjct: 79 GIDVSP-WTAAAMALTLFTSAFLVDIWCGSIAALPKGQWEASRCLGLSFHQTLFRVIAPQ 137 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 AMR I P + ++K ++LA +GF +L G + N T Q ++ Sbjct: 138 AMRIAIAPTVGFSVQVIKGTALASIIGFVELTKAGTMLNNVTYQPFKV 185 >gi|237798794|ref|ZP_04587255.1| amino acid ABC transporter permease [Pseudomonas syringae pv. oryzae str. 1_6] gi|331021647|gb|EGI01704.1| amino acid ABC transporter permease [Pseudomonas syringae pv. oryzae str. 1_6] Length = 242 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 62/195 (31%), Positives = 93/195 (47%), Gaps = 11/195 (5%) Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALK-YQLHF 246 K+ V S L IVL L + +P I T LI G+P LVL+ L Y L Sbjct: 32 KLAVLSLALSIVLGLIGA--TAKLSSSALLRIPA-QIYTTLIRGVPDLVLMLLIFYSLQT 88 Query: 247 DKPVLG---QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 +L ++ +I ++P F + I L A+ E R +++VPRGQ+EAA A Sbjct: 89 WLTMLTDAMEWEYI---EINP-FGAGVITLGFIYGAYFTETFRGAILSVPRGQVEAATAY 144 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363 GL + R V+ PQ MR +P + + + LLK ++L +G ADLV T Q Sbjct: 145 GLKRGQRFRYVVFPQMMRYALPGIGNNWQVLLKATALVSIIGLADLVKASQDAGKSTYQL 204 Query: 364 IEIILIWMFIYLSLS 378 +++ IYL ++ Sbjct: 205 FYFLILAALIYLMIT 219 >gi|158319771|ref|YP_001512278.1| polar amino acid ABC transporter, inner membrane subunit [Alkaliphilus oremlandii OhILAs] gi|158139970|gb|ABW18282.1| polar amino acid ABC transporter, inner membrane subunit [Alkaliphilus oremlandii OhILAs] Length = 266 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 37/122 (30%), Positives = 73/122 (59%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I +S T A+++EIVR G++++ +GQ EAA A+G+ H + V+LPQ +R+I+P ++ Sbjct: 106 IIVSINTGAYMSEIVRGGILSIDKGQFEAAEAIGMNHIQTMINVVLPQVIRNILPATGNE 165 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++ +K++S+ + +L +I T + E LI IYL+++I+I + + Sbjct: 166 FVINIKDTSVLNVISVTELFFQTKSISGATFKFFEPYLITSVIYLTMTIVITRILRYIER 225 Query: 391 KI 392 ++ Sbjct: 226 RM 227 >gi|330836287|ref|YP_004410928.1| amino acid ABC transporter membrane protein, PAAT family [Spirochaeta coccoides DSM 17374] gi|329748190|gb|AEC01546.1| amino acid ABC transporter membrane protein, PAAT family [Spirochaeta coccoides DSM 17374] Length = 211 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 31/89 (34%), Positives = 54/89 (60%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 F ++ IA + AA+ AEI R G+ ++P+GQ EA LG T + + +PQ ++ II Sbjct: 81 RFTAVIIAFTVNYAAYFAEIYRGGIQSIPKGQHEATHVLGFTPWQTFTRITMPQVVKRII 140 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVG 353 P + ++ + L+K+++LA +G A+L V Sbjct: 141 PSMGNEVITLVKDTALAQTIGVAELFRVA 169 >gi|295697439|ref|YP_003590677.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus tusciae DSM 2912] gi|295413041|gb|ADG07533.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus tusciae DSM 2912] Length = 232 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 38/114 (33%), Positives = 65/114 (57%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + I L +++E+ RS L+A+ +GQ+EA +ALG THR+A +++PQ+ +P Sbjct: 102 FAASVIGLGINYGCYLSEVFRSSLLAIDKGQIEACLALGYTHRQAMFHIVIPQSFLISLP 161 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379 PL + + +LK++SL + +++ +QT IE I IYL +SI Sbjct: 162 PLGNYFNAMLKDTSLCAFITLGEIILKTQAYASQTFLTIESYTIAAGIYLIVSI 215 >gi|167748156|ref|ZP_02420283.1| hypothetical protein ANACAC_02900 [Anaerostipes caccae DSM 14662] gi|317472312|ref|ZP_07931640.1| His/Glu/Gln/Arg/opine family amino ABC transporter [Anaerostipes sp. 3_2_56FAA] gi|167652148|gb|EDR96277.1| hypothetical protein ANACAC_02900 [Anaerostipes caccae DSM 14662] gi|316900269|gb|EFV22255.1| His/Glu/Gln/Arg/opine family amino ABC transporter [Anaerostipes sp. 3_2_56FAA] Length = 225 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 40/138 (28%), Positives = 74/138 (53%), Gaps = 6/138 (4%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G + EF+S+ + + + A + +IVR + ++PR Q E+ ++LGLT + R +L+PQ Sbjct: 86 GIHLEGEFISI-VVFTMWGTAEMGDIVRGAVTSMPRHQTESGLSLGLTKLQIYRYILVPQ 144 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG-----GTIINQTGQAIEIILIWMFI 373 +R ++P + ++K +SL V +G +++ VG G I+N + + F+ Sbjct: 145 TVRRVLPGAINLATRMVKTTSLVVIIGVVEVLKVGQQIIEGGILNTPAAPLWVYGFIFFL 204 Query: 374 YLSLSIMIALFMNRLNAK 391 Y L I++ RL AK Sbjct: 205 YFILCYPISIVAKRLEAK 222 >gi|121609114|ref|YP_996921.1| amino acid ABC transporter permease [Verminephrobacter eiseniae EF01-2] gi|121553754|gb|ABM57903.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Verminephrobacter eiseniae EF01-2] Length = 220 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 54/205 (26%), Positives = 105/205 (51%), Gaps = 18/205 (8%) Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249 F + VLG++L++ +R + T + F+ F T +LI + Y L + P Sbjct: 33 FAIALVLGLMLAIMRRSETRFIAKPT---------AFFIEFIRSTPLLIQV-YMLFYVAP 82 Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309 + G I S ++ + + + +CY ++E+ R+GL V RGQ EAA AL L+ + Sbjct: 83 LYG----ITMSALTAGTLGIAVHYACY----VSEVYRAGLNGVARGQWEAACALSLSPWR 134 Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369 ++LPQA+R I+P L + ++ + K++ + A+ +L+ I ++T + +E I + Sbjct: 135 TYSGIILPQAIRPILPALGNYFVAMFKDTPVLSAITVVELMQQAKNIGSETFRFLEPITL 194 Query: 370 WMFIYLSLSIMIALFMNRLNAKIAL 394 +L +S+ A + +L ++ L Sbjct: 195 AGLFFLLISVTCASCLRQLEHRVRL 219 >gi|167902770|ref|ZP_02489975.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Burkholderia pseudomallei NCTC 13177] Length = 262 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 36/96 (37%), Positives = 58/96 (60%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P ++ ALS A++A V +G+ A GQ +A ++LGLT + R VLLPQA+R + Sbjct: 109 PGLAAVVCALSLVGGAYLAHSVHAGIRAAGDGQWQAGLSLGLTRWQTVRHVLLPQAVRIM 168 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359 P +Q+++L+K++SLA VG +L V + N+ Sbjct: 169 TPSFVNQWVSLVKDTSLAYIVGVPELSFVATQVNNR 204 >gi|229593272|ref|YP_002875391.1| putative ABC transporter membrane protein [Pseudomonas fluorescens SBW25] gi|229365138|emb|CAY53377.1| putative ABC transport system, membrane protein [Pseudomonas fluorescens SBW25] Length = 216 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 34/102 (33%), Positives = 61/102 (59%), Gaps = 1/102 (0%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G +SP +++ IAL+ +T+A++AEI R + ++ GQ EA+ +L L + R V+LPQ Sbjct: 80 GVDISP-WLAAAIALTLFTSAYLAEIWRGCVDSIAHGQWEASASLALNPLEQLRYVILPQ 138 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 A+R + P + ++K +++ +GF +L GG + N T Sbjct: 139 ALRIAVAPTVGFSVQVVKGTAVTSIIGFTELTKTGGMLANAT 180 >gi|255659864|ref|ZP_05405273.1| polar amino acid uptake family ABC transporter, permease protein [Mitsuokella multacida DSM 20544] gi|260847943|gb|EEX67950.1| polar amino acid uptake family ABC transporter, permease protein [Mitsuokella multacida DSM 20544] Length = 235 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 65/208 (31%), Positives = 103/208 (49%), Gaps = 9/208 (4%) Query: 177 SFPTLTMDTNAKIFV--FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234 SFPTL + + V FS ++GI+L L PLL I + G P Sbjct: 13 SFPTLLGMVHITLLVTIFSAIVGILLGAAIAVLRIQCVPVIA---PLLRIFISFMRGTPF 69 Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294 LV + L Y F P + I V P L + + + AA+ AEI+RS ++AVP Sbjct: 70 LVQLFLAY---FGVPEILAHVGISMKGVPPLAFVLAV-FTLHMAAYGAEILRSSILAVPV 125 Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354 G+ EAA++LG+T + R V+LPQA + +P L + + ++K +SL VG D++ Sbjct: 126 GEKEAAMSLGMTSFQMYRRVVLPQAFQMAMPALINTVIGVVKGTSLIFNVGVVDIMRKAE 185 Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIA 382 + + +++E+ + IY L +IA Sbjct: 186 LMAGNSQRSLELYVDVAVIYGILIFLIA 213 >gi|26991431|ref|NP_746856.1| amino acid ABC transporter, permease protein [Pseudomonas putida KT2440] gi|24986504|gb|AAN70320.1|AE016673_5 amino acid ABC transporter, permease protein [Pseudomonas putida KT2440] Length = 213 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 45/137 (32%), Positives = 74/137 (54%), Gaps = 3/137 (2%) Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320 ++SP F + + L TAA ++E+ R A+P GQ EAA L L+ + V+LPQ + Sbjct: 77 SLSP-FTAAVVGLGLITAAHMSEVYRGAFAAIPAGQFEAAYVLNLSAPQRFFDVVLPQLV 135 Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380 R IP + + LLK+S++A +G ++ + QT Q + + +YL LS+ Sbjct: 136 RIAIPTSATYAIGLLKDSAVASTIGVGEISFQAYQVSQQTFQGLSVYTAAAVVYLVLSVP 195 Query: 381 IALFMNRLNAKIALKEK 397 +ALF L+A LK++ Sbjct: 196 VALFSRWLSAT--LKQR 210 >gi|330981546|gb|EGH79649.1| amino acid ABC transporter permease [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 242 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 53/156 (33%), Positives = 79/156 (50%), Gaps = 8/156 (5%) Query: 224 ISTFLIFGLPTLVLIALK-YQLHFDKPVLG---QFNFIGGSTVSPEFMSLYIALSCYTAA 279 I T LI G+P LVL+ L Y L +L ++ +I ++P F + I L A Sbjct: 65 IYTTLIRGVPDLVLMLLIFYSLQTWLTMLTDAMEWEYI---EINP-FGAGVITLGFIYGA 120 Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339 + E R +++VPRGQ+EAA A GL + R V+ PQ MR +P + + + LLK ++ Sbjct: 121 YFTETFRGAILSVPRGQVEAATAYGLKRGQRFRYVVFPQMMRYALPGIGNNWQVLLKATA 180 Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375 L +G ADLV T Q +++ IYL Sbjct: 181 LVSIIGLADLVKASQDAGKSTYQLFYFLVLAALIYL 216 >gi|163793473|ref|ZP_02187448.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [alpha proteobacterium BAL199] gi|159181275|gb|EDP65790.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [alpha proteobacterium BAL199] Length = 220 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 60/212 (28%), Positives = 101/212 (47%), Gaps = 22/212 (10%) Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALK 241 TM+ +A + V + G++ L + K + L LY+ ++ G+P LVLI Sbjct: 23 TMEISAIVIVIGLIAGMIGGLLLV-----YGPKPVRLLMRLYVD--VLRGIPVLVLILFS 75 Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301 Y + +LG +S + + +AL+ + +A ++E R + ++P GQ EAA Sbjct: 76 Y---YGLALLG-------VNIS-AYTAGVVALAGFCSAHMSETFRGAIDSIPVGQTEAAK 124 Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361 A+GLT ++ VLLPQA R I+PP + + ++K ++L +G D++ I + Sbjct: 125 AIGLTFQQRFIYVLLPQAARRIVPPAINTAVEMVKGTTLLSIIGVLDVLLATQQTIARNY 184 Query: 362 QAIEIILIWMFIY----LSLSIMIALFMNRLN 389 IE M Y +LS M A F R Sbjct: 185 MVIEFYATAMLFYFVLNFTLSRMGAYFERRFG 216 >gi|49081924|gb|AAT50362.1| PA2202 [synthetic construct] Length = 226 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 44/132 (33%), Positives = 70/132 (53%), Gaps = 5/132 (3%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P ++ ALS A++A V +G+ ++P GQ AA ALGL + RLV+LPQA+ + Sbjct: 94 PALATVVCALSLIGGAYLAHSVYAGIHSLPAGQWAAARALGLRPWQVLRLVILPQALPVM 153 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG-QAIEIILIWMFIYL----SLS 378 +P +Q+++L+K++SLA +G +L V + N+ EI L +Y SL Sbjct: 154 LPSFLNQWVSLIKDTSLAYVIGVGELSFVATQVSNRVMVHPTEIFLFVALLYFLLCTSLD 213 Query: 379 IMIALFMNRLNA 390 + A R A Sbjct: 214 LAAAFLARRRQA 225 >gi|307321919|ref|ZP_07601302.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD [Sinorhizobium meliloti AK83] gi|306892432|gb|EFN23235.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD [Sinorhizobium meliloti AK83] Length = 217 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 38/119 (31%), Positives = 65/119 (54%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + LS + + F +E+ R+G+ +VPRGQ EAA ALGL K ++ PQA++ I+P L + Sbjct: 93 LGLSIHYSTFFSEVYRAGIASVPRGQFEAADALGLHTTKKWMFIVGPQAIKPILPVLGNY 152 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 + + K + L A+ +L I QT + E L+ I+L +S+ + + +L Sbjct: 153 LVGMFKETPLLAAITVVELFGKAQNIAGQTYRYNEPYLMVALIFLIISVPCSFAIRKLE 211 >gi|300935047|ref|ZP_07150079.1| ABC transporter, permease protein [Escherichia coli MS 21-1] gi|300459710|gb|EFK23203.1| ABC transporter, permease protein [Escherichia coli MS 21-1] Length = 238 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 55/186 (29%), Positives = 95/186 (51%), Gaps = 8/186 (4%) Query: 217 KALPLLYISTFLIFGLPTLVLI---ALKYQLHFDK-PVLGQFNFIGGSTVSPEFMSLYIA 272 + LP + + F+ FG L+L L F + PV Q + I VSP F+ IA Sbjct: 55 RGLPEILVVLFIYFGSSQLLLTLSDGFTINLGFVQIPV--QMD-IENFDVSP-FLCGVIA 110 Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 LS AA+ ++ +R L AVP GQ E+ ALGL+ +++PQ R +P L +Q+L Sbjct: 111 LSLLYAAYASQTLRGALKAVPVGQWESGQALGLSKSAIFFRLVMPQMWRHALPGLGNQWL 170 Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 LLK+++L + DL+ +I +T + ++ IYL ++++ + R++ + Sbjct: 171 VLLKDTALVSLISVNDLMLQTKSIATRTQEPFTWYIVAAAIYLGITLLSQYILKRIDLRA 230 Query: 393 ALKEKK 398 E++ Sbjct: 231 TRFERR 236 >gi|239624577|ref|ZP_04667608.1| polar amino acid ABC transporter [Clostridiales bacterium 1_7_47_FAA] gi|239520963|gb|EEQ60829.1| polar amino acid ABC transporter [Clostridiales bacterium 1_7_47FAA] Length = 219 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 59/215 (27%), Positives = 112/215 (52%), Gaps = 21/215 (9%) Query: 183 MDTNAKIF----VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLI 238 M T+ +IF VFS LG+V++ R+S++ K +A+ +YIS ++ G P ++ + Sbjct: 17 MGTSIQIFMVTLVFSLPLGLVVAF--GRMSKN---KYLQAIVKVYIS--IMRGTPLMLQL 69 Query: 239 ALKYQLHFDKPVLGQFNFIGGSTVSP-EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQM 297 + Y G + G S + +I AA+ AEI RSG+ ++P GQ Sbjct: 70 MVVY--------FGPYYLFGLKMGSGYRLWAAFIGFVINYAAYFAEIYRSGIQSMPVGQY 121 Query: 298 EAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII 357 EAA LG + + ++LPQ ++ I+P +T++ + L+K++SLA + A++ S+ + Sbjct: 122 EAAQILGYSRFQTFFKIILPQVIKRILPSVTNEVITLVKDTSLAFTLSVAEMFSIAKGLA 181 Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 I + +F Y+ ++++A+ M + K+ Sbjct: 182 ASQTNMIPFVAAGLFYYI-FNLVVAVGMEWVEKKL 215 >gi|218517085|ref|ZP_03513925.1| probable amino acid ABC transporter, permease protein [Rhizobium etli 8C-3] Length = 219 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 44/125 (35%), Positives = 67/125 (53%), Gaps = 11/125 (8%) Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285 T +I G P LVL+ Y + V G + P F + +AL+ + ++ + EIV Sbjct: 60 TDIIRGTPVLVLVLASY--YVSAAV--------GLDLGP-FSAGVLALAIFCSSHVGEIV 108 Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345 R L A+P+GQ EAA A+GLT + VL PQAMR +P + ++K S+L +G Sbjct: 109 RGALQAIPKGQTEAAKAIGLTFTQTFTSVLWPQAMRQCLPAWVNTAAEMVKASTLLSVIG 168 Query: 346 FADLV 350 A+L+ Sbjct: 169 VAELL 173 >gi|148826212|ref|YP_001290965.1| arginine transporter permease subunit ArtQ [Haemophilus influenzae PittEE] gi|229846209|ref|ZP_04466321.1| arginine transporter permease subunit ArtQ [Haemophilus influenzae 7P49H1] gi|148716372|gb|ABQ98582.1| arginine transporter permease subunit ArtQ [Haemophilus influenzae PittEE] gi|229811213|gb|EEP46930.1| arginine transporter permease subunit ArtQ [Haemophilus influenzae 7P49H1] Length = 221 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 47/172 (27%), Positives = 87/172 (50%), Gaps = 8/172 (4%) Query: 228 LIFGLPTLVLIALKY--QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285 L+ GLP ++++ L Y + + G++ G F ALS AA+ ++ + Sbjct: 53 LLRGLPEIIVVLLVYFGSTELVEMLTGEYIEFGA------FGCGVFALSLIFAAYASQTL 106 Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345 R + A+P+GQ E+ ALGL+ +++PQ R +P L++Q+L LLK+++L +G Sbjct: 107 RGAIQAIPKGQWESGAALGLSKSYTFIHIVMPQVWRHALPGLSNQWLVLLKDTALVSLIG 166 Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 DL+ I T Q I IYL+++++ + + +L + E+ Sbjct: 167 VDDLMRQADLINTNTHQPFTWYGIAALIYLAVTLISQVGIQKLELRFTRFER 218 >gi|186476288|ref|YP_001857758.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia phymatum STM815] gi|184192747|gb|ACC70712.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia phymatum STM815] Length = 225 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 36/121 (29%), Positives = 68/121 (56%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I S A+ +E++R + ++P+GQ EAA ++G+T +A R +LPQA R +PPL++ Sbjct: 94 IGFSLNVGAYNSEVIRGVIESIPKGQWEAAYSMGMTRAQALRRAILPQAARVALPPLSNS 153 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++ L+K++SLA + ++ I + T + + + IYL S +++ RL Sbjct: 154 FIALVKDTSLAAVLTVPEIFQAAQRIASVTYEPLILYTEAALIYLVFSSVLSSAQVRLER 213 Query: 391 K 391 + Sbjct: 214 R 214 >gi|22124842|ref|NP_668265.1| ABC transporter permease [Yersinia pestis KIM 10] gi|45440529|ref|NP_992068.1| putative amino acid ABC transporter permease [Yersinia pestis biovar Microtus str. 91001] gi|108808737|ref|YP_652653.1| putative amino acid ABC transporter permease [Yersinia pestis Antiqua] gi|108811006|ref|YP_646773.1| amino acid ABC transporter, permease protein [Yersinia pestis Nepal516] gi|145600150|ref|YP_001164226.1| amino acid ABC transporter, permease protein [Yersinia pestis Pestoides F] gi|149364904|ref|ZP_01886939.1| putative amino acid ABC transporter, permease protein [Yersinia pestis CA88-4125] gi|162420579|ref|YP_001607783.1| amino acid ABC transporter permease [Yersinia pestis Angola] gi|165926615|ref|ZP_02222447.1| amino acid ABC transporter, permease protein [Yersinia pestis biovar Orientalis str. F1991016] gi|165935981|ref|ZP_02224551.1| amino acid ABC transporter, permease protein [Yersinia pestis biovar Orientalis str. IP275] gi|166010969|ref|ZP_02231867.1| amino acid ABC transporter, permease protein [Yersinia pestis biovar Antiqua str. E1979001] gi|166213024|ref|ZP_02239059.1| amino acid ABC transporter, permease protein [Yersinia pestis biovar Antiqua str. B42003004] gi|167399700|ref|ZP_02305224.1| amino acid ABC transporter, permease protein [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167421515|ref|ZP_02313268.1| amino acid ABC transporter, permease protein [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167423383|ref|ZP_02315136.1| amino acid ABC transporter, permease protein [Yersinia pestis biovar Mediaevalis str. K1973002] gi|167468794|ref|ZP_02333498.1| amino acid ABC transporter, permease protein [Yersinia pestis FV-1] gi|218930280|ref|YP_002348155.1| putative amino acid ABC transporter permease [Yersinia pestis CO92] gi|229838866|ref|ZP_04459025.1| putative amino acid ABC transporter, permease protein [Yersinia pestis biovar Orientalis str. PEXU2] gi|229896359|ref|ZP_04511528.1| putative amino acid ABC transporter, permease protein [Yersinia pestis Pestoides A] gi|229899435|ref|ZP_04514578.1| putative amino acid ABC transporter, permease protein [Yersinia pestis biovar Orientalis str. India 195] gi|229901225|ref|ZP_04516347.1| putative amino acid ABC transporter, permease protein [Yersinia pestis Nepal516] gi|270489413|ref|ZP_06206487.1| ABC transporter, permease protein [Yersinia pestis KIM D27] gi|294504971|ref|YP_003569033.1| putative amino acid ABC transporter, permease protein [Yersinia pestis Z176003] gi|21957671|gb|AAM84516.1|AE013696_9 putative permease of ABC transporter [Yersinia pestis KIM 10] gi|45435386|gb|AAS60945.1| putative amino acid ABC transporter, permease protein [Yersinia pestis biovar Microtus str. 91001] gi|108774654|gb|ABG17173.1| amino acid ABC transporter, permease protein [Yersinia pestis Nepal516] gi|108780650|gb|ABG14708.1| putative amino acid ABC transporter, permease protein [Yersinia pestis Antiqua] gi|115348891|emb|CAL21848.1| putative amino acid ABC transporter, permease protein [Yersinia pestis CO92] gi|145211846|gb|ABP41253.1| amino acid ABC transporter, permease protein [Yersinia pestis Pestoides F] gi|149291317|gb|EDM41391.1| putative amino acid ABC transporter, permease protein [Yersinia pestis CA88-4125] gi|162353394|gb|ABX87342.1| amino acid ABC transporter, permease protein [Yersinia pestis Angola] gi|165916126|gb|EDR34733.1| amino acid ABC transporter, permease protein [Yersinia pestis biovar Orientalis str. IP275] gi|165921543|gb|EDR38740.1| amino acid ABC transporter, permease protein [Yersinia pestis biovar Orientalis str. F1991016] gi|165989969|gb|EDR42270.1| amino acid ABC transporter, permease protein [Yersinia pestis biovar Antiqua str. E1979001] gi|166205811|gb|EDR50291.1| amino acid ABC transporter, permease protein [Yersinia pestis biovar Antiqua str. B42003004] gi|166960434|gb|EDR56455.1| amino acid ABC transporter, permease protein [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167052204|gb|EDR63612.1| amino acid ABC transporter, permease protein [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167057553|gb|EDR67299.1| amino acid ABC transporter, permease protein [Yersinia pestis biovar Mediaevalis str. K1973002] gi|229681154|gb|EEO77248.1| putative amino acid ABC transporter, permease protein [Yersinia pestis Nepal516] gi|229687837|gb|EEO79910.1| putative amino acid ABC transporter, permease protein [Yersinia pestis biovar Orientalis str. India 195] gi|229695232|gb|EEO85279.1| putative amino acid ABC transporter, permease protein [Yersinia pestis biovar Orientalis str. PEXU2] gi|229700635|gb|EEO88665.1| putative amino acid ABC transporter, permease protein [Yersinia pestis Pestoides A] gi|262363035|gb|ACY59756.1| putative amino acid ABC transporter, permease protein [Yersinia pestis D106004] gi|262366959|gb|ACY63516.1| putative amino acid ABC transporter, permease protein [Yersinia pestis D182038] gi|270337917|gb|EFA48694.1| ABC transporter, permease protein [Yersinia pestis KIM D27] gi|294355430|gb|ADE65771.1| putative amino acid ABC transporter, permease protein [Yersinia pestis Z176003] gi|320016444|gb|ADW00016.1| putative amino acid ABC transporter, permease protein [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 217 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 37/108 (34%), Positives = 62/108 (57%), Gaps = 1/108 (0%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G VSP + + +AL+ +T+AF+ +I + A+P+GQ EA+ LGL+ + V+ PQ Sbjct: 79 GIDVSP-WTAAAMALTLFTSAFLVDIWCGSIAALPKGQWEASRCLGLSFHQTLFRVIAPQ 137 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 AMR I P + ++K ++LA +GF +L G + N T Q ++ Sbjct: 138 AMRIAIAPTVGFSVQVIKGTALASIIGFVELTKAGTMLNNVTYQPFKV 185 >gi|302541693|ref|ZP_07294035.1| glutamate transport system permease GluD [Streptomyces hygroscopicus ATCC 53653] gi|302459311|gb|EFL22404.1| glutamate transport system permease GluD [Streptomyces himastatinicus ATCC 53653] Length = 286 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 37/122 (30%), Positives = 68/122 (55%), Gaps = 3/122 (2%) Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327 +L L+ Y + +AE+ R+G+ AV RGQ EAA +LGL + VL+PQ +R+++P + Sbjct: 134 ALVTGLTLYNGSVLAEVFRAGVAAVDRGQREAAYSLGLRKTQVMTYVLVPQGVRAMLPAI 193 Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI---YLSLSIMIALF 384 SQ + LK++SL + + + + G I + + I + M I Y+ + ++++ Sbjct: 194 ISQLVVALKDTSLGFLITYEEFLHAGKLIASNLDYDLPFIPVVMVISPVYIGMCMLLSWC 253 Query: 385 MN 386 N Sbjct: 254 AN 255 Score = 42.0 bits (97), Expect = 0.19, Method: Compositional matrix adjust. Identities = 26/71 (36%), Positives = 42/71 (59%), Gaps = 1/71 (1%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G NT + + +G ++ AGRLS ++ V W+ + VE FR +P LV+IFF+ Sbjct: 64 LLRGLANTLKAFALAAVLSLALGAVLAAGRLSDHRPVRWLATLVVEFFRAMPVLVMIFFV 123 Query: 149 YKSVLSVLPIP 159 + + L V P+P Sbjct: 124 FVA-LKVQPLP 133 >gi|311114713|ref|YP_003985934.1| amino acid ABC transporter membrane protein [Gardnerella vaginalis ATCC 14019] gi|310946207|gb|ADP38911.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Gardnerella vaginalis ATCC 14019] Length = 231 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 73/216 (33%), Positives = 106/216 (49%), Gaps = 29/216 (13%) Query: 191 VFSFVLGIVLSLF------ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244 +FS +LG++L + + R+ + + K +PL I F++ G V LK Sbjct: 35 LFSTILGVILVMMRICPIHSLRIIASAYVEFFKNMPLTIIMVFMVLG----VYAQLK--- 87 Query: 245 HFDKPVLGQFNFIGGSTV-SPEFMSLYIA-LSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302 +G STV S F L IA LS YTAAF+ E +RSGL VP GQ EA A Sbjct: 88 ------------LGFSTVFSVNFFWLAIAGLSFYTAAFVCESLRSGLNTVPLGQAEACRA 135 Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS--VGGTIINQT 360 LGL ++ V+LPQ + PL + ++ LLKNS++A A A S + I Sbjct: 136 LGLNFFQSAFNVILPQTFCGSVAPLGNTFIALLKNSTVAAAASVATETSTLMSEMIERHA 195 Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 + I LI+ Y+ L I I +F L+ K+A++ Sbjct: 196 DLIVPIFLIFACGYIVLIIPIGIFTTYLSNKLAVRR 231 >gi|209519717|ref|ZP_03268505.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. H160] gi|209499861|gb|EDZ99928.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. H160] Length = 218 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 37/101 (36%), Positives = 59/101 (58%) Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 + A+IAEIVR ++VPRG EA +ALG+ + V+ P A+R + P L +Q++ LK Sbjct: 100 SGAYIAEIVRGSFLSVPRGLKEAGLALGMPMWRVLGFVVGPVAIRRMTPALGNQFIVSLK 159 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377 ++SL + +G +L G I+ +A+EI IYL + Sbjct: 160 DTSLFIVIGVGELTRQGQEIMAANFRAVEIWTAVAAIYLCM 200 >gi|150376685|ref|YP_001313281.1| polar amino acid ABC transporter inner membrane subunit [Sinorhizobium medicae WSM419] gi|150031232|gb|ABR63348.1| polar amino acid ABC transporter, inner membrane subunit [Sinorhizobium medicae WSM419] Length = 219 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 38/129 (29%), Positives = 70/129 (54%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + +AL+ + ++ + E+VR L ++P+GQ EAA A+GLT + VL PQA+R +P Sbjct: 89 FQAGVLALAVFCSSHVGELVRGALQSIPKGQTEAAKAIGLTFAQTFAYVLGPQALRQALP 148 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 + ++K S+L +G +L+ +I++T ++E F+Y ++ I F Sbjct: 149 AWVNTAAEMVKASTLLSIIGVGELLLRTQEVISRTFMSLEFYFFAGFLYFVINYGIERFG 208 Query: 386 NRLNAKIAL 394 + K A+ Sbjct: 209 RYVERKTAV 217 >gi|319897354|ref|YP_004135550.1| arginine transporter subunit [Haemophilus influenzae F3031] gi|317432859|emb|CBY81224.1| arginine transporter subunit [Haemophilus influenzae F3031] Length = 221 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 47/172 (27%), Positives = 87/172 (50%), Gaps = 8/172 (4%) Query: 228 LIFGLPTLVLIALKY--QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285 L+ GLP ++++ L Y + + G++ G F ALS AA+ ++ + Sbjct: 53 LLRGLPEIIVVLLVYFGSTELVEMLTGEYIEFGA------FGCGVFALSLIFAAYASQTL 106 Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345 R + A+P+GQ E+ ALGL+ +++PQ R +P L++Q+L LLK+++L +G Sbjct: 107 RGAIQAIPKGQWESGAALGLSKSYTFIHIVMPQVWRHALPGLSNQWLVLLKDTALVSLIG 166 Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 DL+ I T Q I IYL+++++ + + +L + E+ Sbjct: 167 VDDLMHQADLINTNTHQPFTWYGIAALIYLAVTLISQVGIRKLELRFTRFER 218 >gi|302336263|ref|YP_003801470.1| amino acid ABC transporter membrane protein 2, PAAT family [Olsenella uli DSM 7084] gi|301320103|gb|ADK68590.1| amino acid ABC transporter membrane protein 2, PAAT family [Olsenella uli DSM 7084] Length = 280 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 35/118 (29%), Positives = 66/118 (55%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P F + + + + +AE+ R+G+ AVP+GQ EAA +LG+ K ++ PQA+R + Sbjct: 139 PSFWMITLPVGLAASGVLAEVFRAGVNAVPQGQSEAAYSLGMRRMKVMFKIVFPQAVRYV 198 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 IP L SQ + ++K++++A V + D++ +I+ + + IY+ L+ I Sbjct: 199 IPSLISQLVVVVKDTTVAYVVSYPDMLQNARVLISNYSALVSTYFVVAIIYILLNYAI 256 Score = 41.6 bits (96), Expect = 0.20, Method: Compositional matrix adjust. Identities = 19/75 (25%), Positives = 44/75 (58%), Gaps = 6/75 (8%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151 GF+ T ++ + + A +G ++ GR+S ++++ +CRV + FR +P L++I+F + Sbjct: 71 GFLGTMEVSLTAGLIAIALGFVLMLGRVSGSRILGGLCRVVINFFRGVPSLLLIYFFF-- 128 Query: 152 VLSVLPIPDHSIVLP 166 + +P + + +P Sbjct: 129 ----MVVPQYGVRMP 139 >gi|257486647|ref|ZP_05640688.1| amino acid ABC transporter permease [Pseudomonas syringae pv. tabaci ATCC 11528] gi|289625251|ref|ZP_06458205.1| amino acid ABC transporter permease [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289647248|ref|ZP_06478591.1| amino acid ABC transporter permease [Pseudomonas syringae pv. aesculi str. 2250] gi|298488754|ref|ZP_07006782.1| histidine ABC transporter, permease protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298156672|gb|EFH97764.1| histidine ABC transporter, permease protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|320325646|gb|EFW81708.1| amino acid ABC transporter permease [Pseudomonas syringae pv. glycinea str. B076] gi|320327071|gb|EFW83085.1| amino acid ABC transporter permease [Pseudomonas syringae pv. glycinea str. race 4] gi|330867262|gb|EGH01971.1| amino acid ABC transporter permease [Pseudomonas syringae pv. aesculi str. 0893_23] gi|330876918|gb|EGH11067.1| amino acid ABC transporter permease [Pseudomonas syringae pv. glycinea str. race 4] gi|330889585|gb|EGH22246.1| amino acid ABC transporter permease [Pseudomonas syringae pv. mori str. 301020] gi|331010125|gb|EGH90181.1| amino acid ABC transporter permease [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 242 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 53/156 (33%), Positives = 79/156 (50%), Gaps = 8/156 (5%) Query: 224 ISTFLIFGLPTLVLIALK-YQLHFDKPVLG---QFNFIGGSTVSPEFMSLYIALSCYTAA 279 I T LI G+P LVL+ L Y L +L ++ +I ++P F + I L A Sbjct: 65 IYTTLIRGIPDLVLMLLIFYSLQTWLTMLTDAMEWEYI---EINP-FGAGVITLGFIYGA 120 Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339 + E R +++VPRGQ+EAA A GL + R V+ PQ MR +P + + + LLK ++ Sbjct: 121 YFTETFRGAILSVPRGQVEAATAYGLKRGQRFRYVVFPQMMRYALPGIGNNWQVLLKATA 180 Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375 L +G ADLV T Q +++ IYL Sbjct: 181 LVSIIGLADLVKASQDAGKSTYQLFYFLVLAALIYL 216 >gi|222082708|ref|YP_002542073.1| amino acid ABC transporter [Agrobacterium radiobacter K84] gi|221727387|gb|ACM30476.1| amino acid ABC transporter [Agrobacterium radiobacter K84] Length = 221 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 45/125 (36%), Positives = 66/125 (52%), Gaps = 11/125 (8%) Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285 T I G P LVL+ Y VL G + P F + AL+ + ++ + EIV Sbjct: 62 TDFIRGTPVLVLVLASYY------VLSTI----GIDLGP-FQAGVFALAIFCSSHVGEIV 110 Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345 R GL A+P+GQ EAA A+GLT + VL PQA+R +P + ++K S+L +G Sbjct: 111 RGGLQAIPKGQTEAAKAIGLTFGQTFAYVLWPQALRQFLPAWVNTAAEMVKASTLLSVIG 170 Query: 346 FADLV 350 A+L+ Sbjct: 171 VAELL 175 >gi|186470876|ref|YP_001862194.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia phymatum STM815] gi|184197185|gb|ACC75148.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia phymatum STM815] Length = 220 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 34/119 (28%), Positives = 70/119 (58%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P ++ I LS TAA+ ++I+ +G ++ RGQ+EAA+ LT R+ + +PQ +R Sbjct: 88 PGIVAAAIGLSMNTAAYQSQILGAGFRSIARGQIEAAVTFNLTRRQVLWHIEVPQVVRVT 147 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382 +P L S+ ++++K S++ + DL+ VG + + T + +E+ YL+++ +++ Sbjct: 148 LPALVSEMIDIVKASAVVSVISVTDLMRVGQQLSSSTYRPLEVYTCAALFYLAITTLLS 206 >gi|330984857|gb|EGH82960.1| amino acid ABC transporter permease [Pseudomonas syringae pv. lachrymans str. M301315] Length = 242 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 53/156 (33%), Positives = 79/156 (50%), Gaps = 8/156 (5%) Query: 224 ISTFLIFGLPTLVLIALK-YQLHFDKPVLG---QFNFIGGSTVSPEFMSLYIALSCYTAA 279 I T LI G+P LVL+ L Y L +L ++ +I ++P F + I L A Sbjct: 65 IYTTLIRGIPDLVLMLLIFYSLQTWLTMLTDAMEWEYI---EINP-FGAGAITLGFIYGA 120 Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339 + E R +++VPRGQ+EAA A GL + R V+ PQ MR +P + + + LLK ++ Sbjct: 121 YFTETFRGAILSVPRGQVEAATAYGLKRGQRFRYVVFPQMMRYALPGIGNNWQVLLKATA 180 Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375 L +G ADLV T Q +++ IYL Sbjct: 181 LVSIIGLADLVKASQDAGKSTYQLFYFLVLAALIYL 216 >gi|325523104|gb|EGD01507.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. TJI49] Length = 257 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 35/119 (29%), Positives = 70/119 (58%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P F + + LS A+++E+ R+ + ++ GQ EA + +G+++ R V+LPQAM+ Sbjct: 87 PGFWAGVLGLSLNLGAYLSEVFRAAIQSIDHGQREAGMTIGMSNAMIYRRVILPQAMKVA 146 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382 +P + +++L+K+SSL + +L+ G II +T ++++ L+ IY ++S A Sbjct: 147 LPTVGGYFISLMKDSSLVSFIAVNELLRHGTIIIAETFMSMQVYLMVAIIYFAMSFAAA 205 Score = 41.6 bits (96), Expect = 0.22, Method: Compositional matrix adjust. Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 3/72 (4%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP---PLVVI 145 +L G T L+ M A ++G V GRLS + +AW + YVE++R++P L+VI Sbjct: 16 LLKGAWITIELSLISMTGAILLGLAVAIGRLSPRRWIAWPLQCYVEIWRDVPLVVQLLVI 75 Query: 146 FFLYKSVLSVLP 157 +F + LP Sbjct: 76 YFTLPQIGLTLP 87 >gi|219855154|ref|YP_002472276.1| hypothetical protein CKR_1811 [Clostridium kluyveri NBRC 12016] gi|219568878|dbj|BAH06862.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 230 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 56/209 (26%), Positives = 105/209 (50%), Gaps = 13/209 (6%) Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247 +I FS V+ +V+ + T ++ K + + +YIS + G P +V + L + Sbjct: 17 EILFFSVVIALVVGMILT-YAKVGKNKVVRCIASIYIS--FMRGTPMIVQLLLAF---IG 70 Query: 248 KPVLGQFNFIGGSTVS-PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306 P++ + G ST + + IA S AAF AEI RS + + +GQ+EA ++G+T Sbjct: 71 IPLI--LDSFGISTANWNNIIYAIIAFSLNEAAFFAEIFRSAYLDIDKGQIEAGQSIGMT 128 Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT---GQA 363 + R ++ Q +P T+ + L+KN+SL +A+G DL+ + I GQ Sbjct: 129 KFQTFRRIIFVQVAAKALPNTTNMIIELMKNTSLGIAIGVTDLMGMAKQISYNNYGVGQT 188 Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392 E ++ FIY + +++ + + + A++ Sbjct: 189 -ETFIVAAFIYWIMGLILTIVSSNITARL 216 >gi|145635027|ref|ZP_01790733.1| arginine ABC transporter permease protein [Haemophilus influenzae PittAA] gi|260582108|ref|ZP_05849902.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Haemophilus influenzae NT127] gi|319776578|ref|YP_004139066.1| arginine transporter subunit [Haemophilus influenzae F3047] gi|145267635|gb|EDK07633.1| arginine ABC transporter permease protein [Haemophilus influenzae PittAA] gi|260094740|gb|EEW78634.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Haemophilus influenzae NT127] gi|317451169|emb|CBY87402.1| arginine transporter subunit [Haemophilus influenzae F3047] Length = 221 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 47/172 (27%), Positives = 87/172 (50%), Gaps = 8/172 (4%) Query: 228 LIFGLPTLVLIALKY--QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285 L+ GLP ++++ L Y + + G++ G F ALS AA+ ++ + Sbjct: 53 LLRGLPEIIVVLLVYFGSTELVEMLTGEYIEFGA------FGCGVFALSLIFAAYASQTL 106 Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345 R + A+P+GQ E+ ALGL+ +++PQ R +P L++Q+L LLK+++L +G Sbjct: 107 RGAIQAIPKGQWESGAALGLSKSYTFIHIVMPQVWRHALPGLSNQWLVLLKDTALVSLIG 166 Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 DL+ I T Q I IYL+++++ + + +L + E+ Sbjct: 167 VDDLMRQADLINTNTHQPFTWYGIAALIYLAVTLISQVGIRKLELRFTRFER 218 >gi|254500818|ref|ZP_05112969.1| ABC transporter, permease protein, putative [Labrenzia alexandrii DFL-11] gi|222436889|gb|EEE43568.1| ABC transporter, permease protein, putative [Labrenzia alexandrii DFL-11] Length = 237 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 40/124 (32%), Positives = 68/124 (54%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F++ +ALS +++ +E S +P+GQ E ALGL+ K R ++LPQ +R +P Sbjct: 104 FVAGMVALSLVFSSYASEAFLSAFNGIPQGQYEGGYALGLSRYKTMRFIILPQLIRLALP 163 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 L + +L LLK +SL +G ADLV G T + + + IYL L+++ ++ + Sbjct: 164 ALGNLWLILLKETSLVSVIGLADLVREAGIAARVTKEPFLFFGLVLVIYLLLTMISSVGL 223 Query: 386 NRLN 389 R+ Sbjct: 224 LRIE 227 >gi|213970886|ref|ZP_03399009.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tomato T1] gi|213924409|gb|EEB57981.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tomato T1] Length = 237 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 53/156 (33%), Positives = 79/156 (50%), Gaps = 8/156 (5%) Query: 224 ISTFLIFGLPTLVLIALK-YQLHFDKPVLG---QFNFIGGSTVSPEFMSLYIALSCYTAA 279 I T LI G+P LVL+ L Y L +L ++ +I ++P F + I L A Sbjct: 60 IYTTLIRGIPDLVLMLLIFYSLQTWLTMLTDAMEWEYI---EINP-FGAGVITLGFIYGA 115 Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339 + E R +++VPRGQ+EAA A GL + R V+ PQ MR +P + + + LLK ++ Sbjct: 116 YFTETFRGAILSVPRGQVEAATAYGLKRGQRFRYVVFPQMMRYALPGIGNNWQVLLKATA 175 Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375 L +G ADLV T Q +++ IYL Sbjct: 176 LVSIIGLADLVKASQDAGKSTYQLFYFLVLAALIYL 211 >gi|210631313|ref|ZP_03296856.1| hypothetical protein COLSTE_00741 [Collinsella stercoris DSM 13279] gi|210160080|gb|EEA91051.1| hypothetical protein COLSTE_00741 [Collinsella stercoris DSM 13279] Length = 399 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 39/119 (32%), Positives = 71/119 (59%), Gaps = 4/119 (3%) Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 + A++ E++R G+ +V GQ EAA +LGL+ +A R V+ PQ ++ IP L+++ + +K Sbjct: 264 STAYMMEVLRGGIESVDAGQTEAARSLGLSQWEAMRTVVFPQGVKFAIPGLSNELVINIK 323 Query: 337 NSSLAVAVGFADLV----SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 +SS+ +G DL+ +VGG + A+ +I++ + + S ++ F NRLN K Sbjct: 324 DSSVLSVIGTFDLMFATTTVGGIYYAKFEAALVTSVIYLCLTMFASWLLGRFANRLNVK 382 >gi|254179862|ref|ZP_04886461.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Burkholderia pseudomallei 1655] gi|184210402|gb|EDU07445.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Burkholderia pseudomallei 1655] Length = 246 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 45/129 (34%), Positives = 70/129 (54%), Gaps = 1/129 (0%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P ++ ALS A++A V +G+ A GQ +A ++LGLT + R VLLPQA+R + Sbjct: 94 PGLAAVVCALSLVGGAYLAHSVHAGIRAAGAGQWQAGLSLGLTRWQTVRHVLLPQAVRIM 153 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ-TGQAIEIILIWMFIYLSLSIMIA 382 P +Q+++L+K++SLA VG +L V + N+ +I L IYL L + Sbjct: 154 TPSFVNQWVSLVKDTSLAYIVGVPELSFVATQVNNRLMVYPAQIFLFVGVIYLILCTALD 213 Query: 383 LFMNRLNAK 391 + RL A Sbjct: 214 VAATRLLAH 222 >gi|16264464|ref|NP_437256.1| putative amino acid uptake ABC transporter permease protein [Sinorhizobium meliloti 1021] gi|307306765|ref|ZP_07586506.1| polar amino acid ABC transporter, inner membrane subunit [Sinorhizobium meliloti BL225C] gi|15140601|emb|CAC49116.1| ABC transporter, permease [Sinorhizobium meliloti 1021] gi|306902056|gb|EFN32654.1| polar amino acid ABC transporter, inner membrane subunit [Sinorhizobium meliloti BL225C] Length = 219 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 38/129 (29%), Positives = 71/129 (55%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + +AL+ + ++ + E+VR L ++P+GQ EAA A+GLT + VL PQA+R +P Sbjct: 89 FQAGVLALAVFCSSHVGELVRGALQSIPKGQTEAAKAIGLTFAQTFTYVLGPQALRQALP 148 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 + ++K S+L +G ++L+ +I++T ++E F+Y ++ I F Sbjct: 149 AWVNTAAEMVKASTLLSIIGVSELLLRTQELISRTFMSLEFYFFAGFLYFVINYGIERFG 208 Query: 386 NRLNAKIAL 394 + K A+ Sbjct: 209 RYVERKTAV 217 >gi|329910724|ref|ZP_08275365.1| amino acid ABC transporter, permease protein [Oxalobacteraceae bacterium IMCC9480] gi|327546104|gb|EGF31167.1| amino acid ABC transporter, permease protein [Oxalobacteraceae bacterium IMCC9480] Length = 198 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 38/108 (35%), Positives = 61/108 (56%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + L A+ AE++R L +VPRGQ+EAA+AL ++ ++LPQA+ + IPP T+ Sbjct: 68 LGLGLNIGAYGAEVMRGALSSVPRGQIEAAVALNISPFHRFFNIVLPQALANAIPPSTNL 127 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378 + LLK +SL + ADL ++ T + EI I + IY ++ Sbjct: 128 LIELLKGTSLVSLITLADLTFRANQLVEATFRTTEIFTIALVIYFVIA 175 >gi|307289497|ref|ZP_07569443.1| ABC transporter, permease protein [Enterococcus faecalis TX0109] gi|306499515|gb|EFM68886.1| ABC transporter, permease protein [Enterococcus faecalis TX0109] gi|315164602|gb|EFU08619.1| ABC transporter, permease protein [Enterococcus faecalis TX1302] Length = 214 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 30/76 (39%), Positives = 50/76 (65%) Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 AA+ AEI R G+ A+P+GQ EAA L LT + ++LPQ ++ ++P + ++ +NL+K+ Sbjct: 97 AAYFAEIFRGGIQAIPQGQYEAAKVLRLTRFQTVTRIILPQVVKIVLPSVGNEIINLVKD 156 Query: 338 SSLAVAVGFADLVSVG 353 +SL +G DL+ G Sbjct: 157 TSLIYVLGLGDLLRAG 172 >gi|306829413|ref|ZP_07462603.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus mitis ATCC 6249] gi|304428499|gb|EFM31589.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus mitis ATCC 6249] Length = 213 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 61/214 (28%), Positives = 110/214 (51%), Gaps = 23/214 (10%) Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV-LI 238 ++T+ A + +FS LGI+++ FA ++ H K L LYI +++ G P L+ LI Sbjct: 16 SMTIQVFALVLIFSIPLGIIIA-FALQI----HWKPLHYLIDLYI--WVMRGTPLLLQLI 68 Query: 239 ALKYQLHFDKPVLG-QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQM 297 + Y L P +G + + + + IA AA+ AEI R G+ +P+GQ Sbjct: 69 FIYYVL----PSIGIRLDRLPAAV---------IAFVLNYAAYFAEIFRGGIETIPKGQY 115 Query: 298 EAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII 357 EAA L + R ++LPQ + ++P + ++ ++L+K++SL A+G +DL+ T Sbjct: 116 EAAKVLKFSPVATVRYIILPQVTKIVLPSVFNEIMSLVKDTSLVYALGISDLILASRTAA 175 Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 N+ + + L IYL + ++ + +L K Sbjct: 176 NRDANLVPMFLAGA-IYLIMIGLVTIVAKKLEKK 208 >gi|186473892|ref|YP_001861234.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia phymatum STM815] gi|184196224|gb|ACC74188.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia phymatum STM815] Length = 240 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 53/199 (26%), Positives = 98/199 (49%), Gaps = 12/199 (6%) Query: 204 ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL----GQFNFIGG 259 A +LSR+ +T + L LY + F G+P L++I Y +F L GQ+ G Sbjct: 45 AAKLSRY---RTARVLGDLYTTVFR--GVPELLVI---YLFYFGGSTLVTTVGQWFGAEG 96 Query: 260 STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319 P F+ +A+ + A+ AE+ RS ++AV +G++EAA ++G+ R +L+PQ Sbjct: 97 FVGVPPFVIGALAVGMISGAYQAEVYRSAVLAVSKGELEAARSIGMPTMTMARRILIPQV 156 Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379 +R +P + + + LK+S+L G A+L+ T Q ++ +YL ++ Sbjct: 157 LRFALPGIGNVWQLSLKDSALISVTGLAELLRASQIAAGSTHQYFLFFVVGGALYLVMTG 216 Query: 380 MIALFMNRLNAKIALKEKK 398 + N A++ ++ Sbjct: 217 ISNRVFNHAEARVGRSFRR 235 >gi|108799120|ref|YP_639317.1| amino acid ABC transporter permease [Mycobacterium sp. MCS] gi|119868235|ref|YP_938187.1| polar amino acid ABC transporter, inner membrane subunit [Mycobacterium sp. KMS] gi|108769539|gb|ABG08261.1| amino acid ABC transporter membrane protein 2, PAAT family [Mycobacterium sp. MCS] gi|119694324|gb|ABL91397.1| amino acid ABC transporter membrane protein 2, PAAT family [Mycobacterium sp. KMS] Length = 292 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 42/118 (35%), Positives = 72/118 (61%) Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 L+ Y A IAEIVR+G+ A+PRGQ EAA ALGL + R +LLPQA+ S++P L SQ Sbjct: 146 GLTLYNGAVIAEIVRAGVKALPRGQAEAASALGLRWGQTQRSILLPQAVTSMLPVLVSQL 205 Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 + +LK++++ + F ++V G + + G I +++ + +S++ ++ +L Sbjct: 206 VVVLKDTAIGYQITFVEMVRQGTVVGSSYGNYIPALIVIAVLMISVNFALSALATKLE 263 Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust. Identities = 38/128 (29%), Positives = 63/128 (49%), Gaps = 19/128 (14%) Query: 23 RVHNISVQIILALLLTVIFLWCVNNVYNNME-KSNLSLGIGFLSERAGFEIDQGIVPYTS 81 R NI + +I L +T + +W V Y+ ++ K L+ A +E P+ + Sbjct: 15 RRRNIVITLI-TLAITALIVWVV---YSRLDAKGQLT--------AAKWE------PFLT 56 Query: 82 DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141 + + T +L G T A ++ A I+G +G GRLS + W+C V VE FR +P Sbjct: 57 PNLWTTYVLPGVQGTLTAAAVSIVLALILGFGLGVGRLSVITPIRWVCAVIVEFFRAVPV 116 Query: 142 LVVIFFLY 149 L+++ F Y Sbjct: 117 LIMMIFAY 124 >gi|326329396|ref|ZP_08195720.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Nocardioidaceae bacterium Broad-1] gi|325952722|gb|EGD44738.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Nocardioidaceae bacterium Broad-1] Length = 284 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 40/120 (33%), Positives = 73/120 (60%), Gaps = 8/120 (6%) Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285 T L G+P+++++ + P LG + G T S +++ + + CY A++AE+ Sbjct: 120 TDLFRGVPSIMVVVI---CGIGIPALG----LSGVTSSLFWLTTFALVLCY-GAYVAEVF 171 Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345 R+G++A+ Q+ +A AL LT + R V+LPQA+R ++PPL + ++L K+++L AVG Sbjct: 172 RAGILAIHPTQVASAEALALTRAQTMRFVVLPQAVRRVVPPLMNDLVSLQKDTALISAVG 231 >gi|313500661|gb|ADR62027.1| Amino acid ABC transporter, permease protein [Pseudomonas putida BIRD-1] Length = 213 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 45/137 (32%), Positives = 74/137 (54%), Gaps = 3/137 (2%) Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320 ++SP F + + L TAA ++E+ R A+P GQ EAA L L+ + V+LPQ + Sbjct: 77 SLSP-FTAAVVGLGLITAAHMSEVYRGAFAAIPAGQFEAAYVLNLSAPQRFFDVVLPQLV 135 Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380 R IP + + LLK+S++A +G ++ + QT Q + + +YL LS+ Sbjct: 136 RIAIPTSATYAIGLLKDSAVASTIGVGEISFQAYQVSQQTFQGLSVYSAAAVVYLVLSVP 195 Query: 381 IALFMNRLNAKIALKEK 397 +ALF L+A LK++ Sbjct: 196 VALFSRWLSAT--LKQR 210 >gi|301630238|ref|XP_002944229.1| PREDICTED: glutamine transport ATP-binding protein glnQ-like [Xenopus (Silurana) tropicalis] Length = 444 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 57/206 (27%), Positives = 97/206 (47%), Gaps = 18/206 (8%) Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249 F+ + G+ L+L R R TG Y+ L+ G+P V++ L Y F Sbjct: 27 FIGGALTGLPLALARARGGRWLRVLTGA-----YVQ--LVQGIPLPVIMFLAY---FGIS 76 Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309 + G F+ P ++ +A++ Y++A++ EI + + AVP+ Q EAA L LT + Sbjct: 77 IAG-FDL-------PSLVAAGLAMTAYSSAYLGEIWKGCIQAVPKTQWEAAACLALTPWQ 128 Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369 V+LPQA R + P + ++KNSS AV +GF DL + N T + + Sbjct: 129 RAVHVVLPQAARIAVAPTVGFLVQIVKNSSYAVVIGFFDLTYSARVVNNSTFAPFVVFSL 188 Query: 370 WMFIYLSLSIMIALFMNRLNAKIALK 395 +Y ++ ++ RL ++ K Sbjct: 189 AAVLYFAICYPLSTLSYRLEKRLVRK 214 >gi|237812178|ref|YP_002896629.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Burkholderia pseudomallei MSHR346] gi|254297702|ref|ZP_04965155.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Burkholderia pseudomallei 406e] gi|157806935|gb|EDO84105.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Burkholderia pseudomallei 406e] gi|237504085|gb|ACQ96403.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Burkholderia pseudomallei MSHR346] Length = 247 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 36/96 (37%), Positives = 58/96 (60%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P ++ ALS A++A V +G+ A GQ +A ++LGLT + R VLLPQA+R + Sbjct: 94 PGLAAVVCALSLVGGAYLAHSVHAGIRAAGAGQWQAGLSLGLTRWQTVRHVLLPQAVRIM 153 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359 P +Q+++L+K++SLA VG +L V + N+ Sbjct: 154 TPSFVNQWVSLVKDTSLAYIVGVPELSFVATQVNNR 189 >gi|29375395|ref|NP_814549.1| amino acid ABC transporter, permease protein [Enterococcus faecalis V583] gi|255971263|ref|ZP_05421849.1| amino acid ABC transporter, permease [Enterococcus faecalis T1] gi|255973883|ref|ZP_05424469.1| ABC-type amino acid transport system [Enterococcus faecalis T2] gi|256617691|ref|ZP_05474537.1| ABC-type amino acid transport system [Enterococcus faecalis ATCC 4200] gi|256761568|ref|ZP_05502148.1| amino acid ABC transporter, permease [Enterococcus faecalis T3] gi|256854333|ref|ZP_05559697.1| amino acid ABC transporter [Enterococcus faecalis T8] gi|256957329|ref|ZP_05561500.1| ABC-type amino acid transport system [Enterococcus faecalis DS5] gi|256959935|ref|ZP_05564106.1| ABC-type amino acid transporter [Enterococcus faecalis Merz96] gi|256964361|ref|ZP_05568532.1| ABC-type amino acid transporter [Enterococcus faecalis HIP11704] gi|257077675|ref|ZP_05572036.1| ABC-type amino acid transporter [Enterococcus faecalis JH1] gi|257081063|ref|ZP_05575424.1| ABC-type amino acid transport system [Enterococcus faecalis E1Sol] gi|257086160|ref|ZP_05580521.1| ABC-type amino acid transport system [Enterococcus faecalis D6] gi|257089233|ref|ZP_05583594.1| ABC amino acid transporter permease [Enterococcus faecalis CH188] gi|257415374|ref|ZP_05592368.1| ABC-type amino acid transport system [Enterococcus faecalis AR01/DG] gi|257418408|ref|ZP_05595402.1| ABC amino acid transporter [Enterococcus faecalis T11] gi|257421057|ref|ZP_05598047.1| ABC amino acid transporter [Enterococcus faecalis X98] gi|29342855|gb|AAO80619.1| amino acid ABC transporter, permease protein [Enterococcus faecalis V583] gi|255962281|gb|EET94757.1| amino acid ABC transporter, permease [Enterococcus faecalis T1] gi|255966755|gb|EET97377.1| ABC-type amino acid transport system [Enterococcus faecalis T2] gi|256597218|gb|EEU16394.1| ABC-type amino acid transport system [Enterococcus faecalis ATCC 4200] gi|256682819|gb|EEU22514.1| amino acid ABC transporter, permease [Enterococcus faecalis T3] gi|256709893|gb|EEU24937.1| amino acid ABC transporter [Enterococcus faecalis T8] gi|256947825|gb|EEU64457.1| ABC-type amino acid transport system [Enterococcus faecalis DS5] gi|256950431|gb|EEU67063.1| ABC-type amino acid transporter [Enterococcus faecalis Merz96] gi|256954857|gb|EEU71489.1| ABC-type amino acid transporter [Enterococcus faecalis HIP11704] gi|256985705|gb|EEU73007.1| ABC-type amino acid transporter [Enterococcus faecalis JH1] gi|256989093|gb|EEU76395.1| ABC-type amino acid transport system [Enterococcus faecalis E1Sol] gi|256994190|gb|EEU81492.1| ABC-type amino acid transport system [Enterococcus faecalis D6] gi|256998045|gb|EEU84565.1| ABC amino acid transporter permease [Enterococcus faecalis CH188] gi|257157202|gb|EEU87162.1| ABC-type amino acid transport system [Enterococcus faecalis ARO1/DG] gi|257160236|gb|EEU90196.1| ABC amino acid transporter [Enterococcus faecalis T11] gi|257162881|gb|EEU92841.1| ABC amino acid transporter [Enterococcus faecalis X98] gi|295113979|emb|CBL32616.1| amino acid ABC transporter membrane protein, PAAT family (TC 3.A.1.3.-) [Enterococcus sp. 7L76] Length = 213 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 30/76 (39%), Positives = 50/76 (65%) Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 AA+ AEI R G+ A+P+GQ EAA L LT + ++LPQ ++ ++P + ++ +NL+K+ Sbjct: 96 AAYFAEIFRGGIQAIPQGQYEAAKVLRLTRFQTVTRIILPQVVKIVLPSVGNEIINLVKD 155 Query: 338 SSLAVAVGFADLVSVG 353 +SL +G DL+ G Sbjct: 156 TSLIYVLGLGDLLRAG 171 >gi|303257952|ref|ZP_07343961.1| amino acid ABC transporter, permease protein [Burkholderiales bacterium 1_1_47] gi|331000077|ref|ZP_08323772.1| ABC transporter, permease protein [Parasutterella excrementihominis YIT 11859] gi|302859295|gb|EFL82377.1| amino acid ABC transporter, permease protein [Burkholderiales bacterium 1_1_47] gi|329572961|gb|EGG54581.1| ABC transporter, permease protein [Parasutterella excrementihominis YIT 11859] Length = 222 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 47/167 (28%), Positives = 82/167 (49%), Gaps = 11/167 (6%) Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286 ++I G P LV + Y + F P +G + F++ I S A+ AE +R Sbjct: 62 WVIRGTPLLVQL---YVVFFGLPSIG--------IMVDAFLAAVIVFSINEGAYNAETIR 110 Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346 L +VP+GQMEA +GL + + V+LPQA R+ P L + ++++K++SLA + Sbjct: 111 GALESVPQGQMEAGRCVGLNYFQIMWHVVLPQAFRTAFPALGNSMISMVKDTSLAANITV 170 Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393 A++ I +T + + + + IYL S ++ R K+ Sbjct: 171 AEMFFQAQRIAGRTYETMAVYIEVALIYLIFSTILEYLQRRGEKKLG 217 >gi|224437529|ref|ZP_03658487.1| polar amino acid ABC transporter, inner membrane subunit [Helicobacter cinaedi CCUG 18818] gi|313143980|ref|ZP_07806173.1| polar amino acid ABC transporter [Helicobacter cinaedi CCUG 18818] gi|313129011|gb|EFR46628.1| polar amino acid ABC transporter [Helicobacter cinaedi CCUG 18818] Length = 235 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 28/73 (38%), Positives = 53/73 (72%) Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 + A+++EI+RSG++++ +GQ EAA ALGL+ + R ++ PQA+++ +P L ++++ LLK Sbjct: 114 SGAYVSEIIRSGILSIDKGQDEAARALGLSSSLSMRYIIFPQALKNSLPTLGNEFIALLK 173 Query: 337 NSSLAVAVGFADL 349 +S+A + DL Sbjct: 174 ETSVANYITVHDL 186 >gi|163747480|ref|ZP_02154831.1| ABC transporter, membrane spanning protein (amino acid) [Oceanibulbus indolifex HEL-45] gi|161379236|gb|EDQ03654.1| ABC transporter, membrane spanning protein (amino acid) [Oceanibulbus indolifex HEL-45] Length = 217 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 43/138 (31%), Positives = 75/138 (54%), Gaps = 1/138 (0%) Query: 254 FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313 F I G +SP F++ I L+ YT+A+ EIVR + AVP AA +LG+T + Sbjct: 76 FQAIAGWGISP-FVTSCIVLALYTSAYCTEIVRGAIEAVPSVTRRAARSLGMTWGQDLTQ 134 Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI 373 ++ P A+R +P L ++K+S+L + +G +L+ ++ + + + I+L+ I Sbjct: 135 IVFPMALRVGLPSWIGLTLGVMKDSALVMWLGIIELLRSSQILVTRLQEPMFILLVTGAI 194 Query: 374 YLSLSIMIALFMNRLNAK 391 Y +LS IA +RL + Sbjct: 195 YFALSFPIARLGSRLEKR 212 >gi|317053311|ref|YP_004119078.1| binding-protein-dependent transport systems inner membrane component [Pantoea sp. At-9b] gi|316953050|gb|ADU72522.1| binding-protein-dependent transport systems inner membrane component [Pantoea sp. At-9b] Length = 232 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 60/207 (28%), Positives = 99/207 (47%), Gaps = 19/207 (9%) Query: 194 FVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ 253 F GI L+ A R S G LL++ LI G+P + +I + + + P L Sbjct: 43 FPGGIALACLAWRFS-------GVVRSLLFLWAELIRGIPLIFVI---FWMWYLLPALTG 92 Query: 254 FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313 + G TV+ +AL+ +T+A + +GL A+P GQ AA++ G + K Sbjct: 93 SDMPGALTVA-------LALAWFTSASVMHSTLAGLQALPPGQHHAALSQGFSAGKLLWH 145 Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN--QTGQAIEIILIWM 371 +LLPQ +R+I P L +NL+K++SLA + +L ++ G + N Q A + + Sbjct: 146 ILLPQTLRNIRPSLAGIGINLIKDTSLAFILNVPELTTLAGQVNNRVQVYPAALFVFTGL 205 Query: 372 FIYLSLSIMIALFMNRLNAKIALKEKK 398 YL + + L R N +I K+ Sbjct: 206 VYYLLCTGLANLVQRRWNDQIRSCRKE 232 >gi|227517777|ref|ZP_03947826.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus faecalis TX0104] gi|227554922|ref|ZP_03984969.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus faecalis HH22] gi|229546661|ref|ZP_04435386.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus faecalis TX1322] gi|229548747|ref|ZP_04437472.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus faecalis ATCC 29200] gi|293383501|ref|ZP_06629412.1| amino acid ABC transporter, permease protein [Enterococcus faecalis R712] gi|293386673|ref|ZP_06631247.1| amino acid ABC transporter, permease protein [Enterococcus faecalis S613] gi|294779832|ref|ZP_06745218.1| ABC transporter, permease protein [Enterococcus faecalis PC1.1] gi|300859984|ref|ZP_07106072.1| ABC transporter, permease protein [Enterococcus faecalis TUSoD Ef11] gi|307270135|ref|ZP_07551452.1| ABC transporter, permease protein [Enterococcus faecalis TX4248] gi|307271415|ref|ZP_07552689.1| ABC transporter, permease protein [Enterococcus faecalis TX0855] gi|307276212|ref|ZP_07557342.1| ABC transporter, permease protein [Enterococcus faecalis TX2134] gi|307284361|ref|ZP_07564526.1| ABC transporter, permease protein [Enterococcus faecalis TX0860] gi|312901656|ref|ZP_07760926.1| ABC transporter, permease protein [Enterococcus faecalis TX0470] gi|312905049|ref|ZP_07764174.1| ABC transporter, permease protein [Enterococcus faecalis TX0635] gi|312907119|ref|ZP_07766112.1| ABC transporter, permease protein [Enterococcus faecalis DAPTO 512] gi|312951823|ref|ZP_07770714.1| ABC transporter, permease protein [Enterococcus faecalis TX0102] gi|312979302|ref|ZP_07791000.1| ABC transporter, permease protein [Enterococcus faecalis DAPTO 516] gi|227074774|gb|EEI12737.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus faecalis TX0104] gi|227175948|gb|EEI56920.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus faecalis HH22] gi|229306140|gb|EEN72136.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus faecalis ATCC 29200] gi|229308228|gb|EEN74215.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus faecalis TX1322] gi|291079135|gb|EFE16499.1| amino acid ABC transporter, permease protein [Enterococcus faecalis R712] gi|291083890|gb|EFE20853.1| amino acid ABC transporter, permease protein [Enterococcus faecalis S613] gi|294453106|gb|EFG21522.1| ABC transporter, permease protein [Enterococcus faecalis PC1.1] gi|300850802|gb|EFK78551.1| ABC transporter, permease protein [Enterococcus faecalis TUSoD Ef11] gi|306503301|gb|EFM72553.1| ABC transporter, permease protein [Enterococcus faecalis TX0860] gi|306507124|gb|EFM76264.1| ABC transporter, permease protein [Enterococcus faecalis TX2134] gi|306511910|gb|EFM80906.1| ABC transporter, permease protein [Enterococcus faecalis TX0855] gi|306513504|gb|EFM82119.1| ABC transporter, permease protein [Enterococcus faecalis TX4248] gi|310626896|gb|EFQ10179.1| ABC transporter, permease protein [Enterococcus faecalis DAPTO 512] gi|310630226|gb|EFQ13509.1| ABC transporter, permease protein [Enterococcus faecalis TX0102] gi|310631628|gb|EFQ14911.1| ABC transporter, permease protein [Enterococcus faecalis TX0635] gi|311287896|gb|EFQ66452.1| ABC transporter, permease protein [Enterococcus faecalis DAPTO 516] gi|311291267|gb|EFQ69823.1| ABC transporter, permease protein [Enterococcus faecalis TX0470] gi|315027598|gb|EFT39530.1| ABC transporter, permease protein [Enterococcus faecalis TX2137] gi|315030507|gb|EFT42439.1| ABC transporter, permease protein [Enterococcus faecalis TX4000] gi|315031301|gb|EFT43233.1| ABC transporter, permease protein [Enterococcus faecalis TX0017] gi|315035305|gb|EFT47237.1| ABC transporter, permease protein [Enterococcus faecalis TX0027] gi|315145197|gb|EFT89213.1| ABC transporter, permease protein [Enterococcus faecalis TX2141] gi|315148312|gb|EFT92328.1| ABC transporter, permease protein [Enterococcus faecalis TX4244] gi|315151625|gb|EFT95641.1| ABC transporter, permease protein [Enterococcus faecalis TX0012] gi|315154250|gb|EFT98266.1| ABC transporter, permease protein [Enterococcus faecalis TX0031] gi|315154877|gb|EFT98893.1| ABC transporter, permease protein [Enterococcus faecalis TX0043] gi|315159961|gb|EFU03978.1| ABC transporter, permease protein [Enterococcus faecalis TX0312] gi|315161884|gb|EFU05901.1| ABC transporter, permease protein [Enterococcus faecalis TX0645] gi|315166987|gb|EFU11004.1| ABC transporter, permease protein [Enterococcus faecalis TX1341] gi|315170860|gb|EFU14877.1| ABC transporter, permease protein [Enterococcus faecalis TX1342] gi|315172709|gb|EFU16726.1| ABC transporter, permease protein [Enterococcus faecalis TX1346] gi|315573427|gb|EFU85618.1| ABC transporter, permease protein [Enterococcus faecalis TX0309B] gi|315576571|gb|EFU88762.1| ABC transporter, permease protein [Enterococcus faecalis TX0630] gi|315581345|gb|EFU93536.1| ABC transporter, permease protein [Enterococcus faecalis TX0309A] gi|323479998|gb|ADX79437.1| amino acid ABC transporter, permease protein [Enterococcus faecalis 62] gi|327534392|gb|AEA93226.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus faecalis OG1RF] gi|329577681|gb|EGG59109.1| ABC transporter, permease protein [Enterococcus faecalis TX1467] Length = 214 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 30/76 (39%), Positives = 50/76 (65%) Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 AA+ AEI R G+ A+P+GQ EAA L LT + ++LPQ ++ ++P + ++ +NL+K+ Sbjct: 97 AAYFAEIFRGGIQAIPQGQYEAAKVLRLTRFQTVTRIILPQVVKIVLPSVGNEIINLVKD 156 Query: 338 SSLAVAVGFADLVSVG 353 +SL +G DL+ G Sbjct: 157 TSLIYVLGLGDLLRAG 172 >gi|330970980|gb|EGH71046.1| amino acid ABC transporter permease [Pseudomonas syringae pv. aceris str. M302273PT] Length = 242 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 53/156 (33%), Positives = 79/156 (50%), Gaps = 8/156 (5%) Query: 224 ISTFLIFGLPTLVLIALK-YQLHFDKPVLG---QFNFIGGSTVSPEFMSLYIALSCYTAA 279 I T LI G+P LVL+ L Y L +L ++ +I ++P F + I L A Sbjct: 65 IYTTLIRGVPDLVLMLLIFYSLQTWLTMLTDAMEWEYI---EINP-FGAGVITLGFIYGA 120 Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339 + E R +++VPRGQ+EAA A GL + R V+ PQ MR +P + + + LLK ++ Sbjct: 121 YFTETFRGAILSVPRGQVEAATAYGLKRGQRFRYVVFPQMMRYALPGIGNNWQVLLKATA 180 Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375 L +G ADLV T Q +++ IYL Sbjct: 181 LVSIIGLADLVKASQDAGKSTYQLFYFLVLAALIYL 216 >gi|291459981|ref|ZP_06599371.1| L-cystine ABC transporter, permease protein [Oribacterium sp. oral taxon 078 str. F0262] gi|291417322|gb|EFE91041.1| L-cystine ABC transporter, permease protein [Oribacterium sp. oral taxon 078 str. F0262] Length = 223 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 52/185 (28%), Positives = 95/185 (51%), Gaps = 20/185 (10%) Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251 FS V I+L++ R + + AL LY+S F G P + QL + L Sbjct: 33 FSLVFAILLAII-----RQYRIRGLYALSSLYVSFFR--GTPFVA------QLFWFYYGL 79 Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311 Q F +SP F +L I +S AAF++E +R+ L +V + Q EA +++G+ + Sbjct: 80 TQI-FDAIKVMSP-FTALVICMSANYAAFMSEDIRAALNSVSKAQYEAGLSIGMHPLQTV 137 Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT-----GQAIEI 366 + ++LPQA R P L++ ++ + K++S+ +G+ D+++ G ++ G + I Sbjct: 138 QRIILPQAARVAAPGLSNHFIGIFKSTSIGFMIGYKDMMAAVGLETSKAYRFLEGYTVSI 197 Query: 367 ILIWM 371 I+ W+ Sbjct: 198 IVYWV 202 >gi|254473461|ref|ZP_05086858.1| polar amino acid ABC transporter, inner membrane subunit [Pseudovibrio sp. JE062] gi|211957577|gb|EEA92780.1| polar amino acid ABC transporter, inner membrane subunit [Pseudovibrio sp. JE062] Length = 236 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 42/125 (33%), Positives = 70/125 (56%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F++ IALS +++ +E S A+ +GQ E A ALGL + RLV+LPQ +R +P Sbjct: 103 FIAGMIALSLVFSSYASEAFLSAFRAIKQGQYEGAAALGLGYAHTMRLVILPQLVRLALP 162 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 L++ +L LLK +SL +G AD++ T + + IYL L+++ + + Sbjct: 163 ALSNLWLILLKETSLVSIIGLADIIRYSNMAARTTKEPFLFFSVACAIYLVLAVISSGGI 222 Query: 386 NRLNA 390 +RL+A Sbjct: 223 SRLDA 227 >gi|153215607|ref|ZP_01950052.1| arginine ABC transporter, permease protein [Vibrio cholerae 1587] gi|124114695|gb|EAY33515.1| arginine ABC transporter, permease protein [Vibrio cholerae 1587] Length = 229 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 39/89 (43%), Positives = 58/89 (65%), Gaps = 1/89 (1%) Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321 +SP F+S IALS A++ ++ +R L AV RGQ EAA ALG+ A ++LPQA+R Sbjct: 87 ISP-FISGVIALSLIFASYASQTLRGALKAVGRGQREAASALGIPPSHAFIRIVLPQAVR 145 Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 +P L +Q+L LLK+++L +G DL+ Sbjct: 146 HALPGLMNQWLVLLKDTALVSLIGVTDLL 174 >gi|301383764|ref|ZP_07232182.1| amino acid ABC transporter permease [Pseudomonas syringae pv. tomato Max13] gi|302059460|ref|ZP_07251001.1| amino acid ABC transporter permease [Pseudomonas syringae pv. tomato K40] gi|302133660|ref|ZP_07259650.1| amino acid ABC transporter permease [Pseudomonas syringae pv. tomato NCPPB 1108] gi|330966543|gb|EGH66803.1| amino acid ABC transporter permease [Pseudomonas syringae pv. actinidiae str. M302091] gi|331015689|gb|EGH95745.1| amino acid ABC transporter permease [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 242 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 53/156 (33%), Positives = 79/156 (50%), Gaps = 8/156 (5%) Query: 224 ISTFLIFGLPTLVLIALK-YQLHFDKPVLG---QFNFIGGSTVSPEFMSLYIALSCYTAA 279 I T LI G+P LVL+ L Y L +L ++ +I ++P F + I L A Sbjct: 65 IYTTLIRGIPDLVLMLLIFYSLQTWLTMLTDAMEWEYI---EINP-FGAGVITLGFIYGA 120 Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339 + E R +++VPRGQ+EAA A GL + R V+ PQ MR +P + + + LLK ++ Sbjct: 121 YFTETFRGAILSVPRGQVEAATAYGLKRGQRFRYVVFPQMMRYALPGIGNNWQVLLKATA 180 Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375 L +G ADLV T Q +++ IYL Sbjct: 181 LVSIIGLADLVKASQDAGKSTYQLFYFLVLAALIYL 216 >gi|257083726|ref|ZP_05578087.1| ABC-type amino acid transport system [Enterococcus faecalis Fly1] gi|256991756|gb|EEU79058.1| ABC-type amino acid transport system [Enterococcus faecalis Fly1] Length = 213 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 30/76 (39%), Positives = 50/76 (65%) Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 AA+ AEI R G+ A+P+GQ EAA L LT + ++LPQ ++ ++P + ++ +NL+K+ Sbjct: 96 AAYFAEIFRGGIQAIPQGQYEAAKVLRLTRFQTVTRIILPQVVKIVLPSVGNEIINLVKD 155 Query: 338 SSLAVAVGFADLVSVG 353 +SL +G DL+ G Sbjct: 156 TSLIYVLGLGDLLRAG 171 >gi|209552106|ref|YP_002284022.1| polar amino acid ABC transporter inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209539699|gb|ACI59630.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 220 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 42/114 (36%), Positives = 61/114 (53%), Gaps = 3/114 (2%) Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338 AF AE R+ + +P +AAIALGL R V++PQA R+ +P L + + + S Sbjct: 103 AFNAEAYRASIQGIPPAHHDAAIALGLGKRVTAMYVIMPQAARNAMPVLVTNAIGAFQQS 162 Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM---IALFMNRLN 389 +L VG ADL+ G + QT + IE IYL +S++ IA F+ R N Sbjct: 163 ALVALVGVADLMYQGKLLSTQTYRPIEAYTSVAIIYLVISVIFGQIAGFIERRN 216 >gi|145633092|ref|ZP_01788824.1| arginine transporter permease subunit ArtQ [Haemophilus influenzae 3655] gi|144986318|gb|EDJ92897.1| arginine transporter permease subunit ArtQ [Haemophilus influenzae 3655] Length = 221 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 47/172 (27%), Positives = 87/172 (50%), Gaps = 8/172 (4%) Query: 228 LIFGLPTLVLIALKY--QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285 L+ GLP ++++ L Y + + G++ G F ALS AA+ ++ + Sbjct: 53 LLRGLPEIIVVLLVYFGSTELVEMLTGEYIEFGA------FGCGVFALSLIFAAYASQTL 106 Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345 R + A+P+GQ E+ ALGL+ +++PQ R +P L++Q+L LLK+++L +G Sbjct: 107 RGAIQAIPKGQWESGAALGLSKSYTFIHIVMPQVWRHALPGLSNQWLVLLKDTALVSLIG 166 Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 DL+ I T Q I IYL+++++ + + +L + E+ Sbjct: 167 VDDLMRQADLINTNTHQPFTWYGIAALIYLAVTLISQVGIRKLELRFTRFER 218 >gi|317050659|ref|YP_004111775.1| polar amino acid ABC transporter inner membrane subunit [Desulfurispirillum indicum S5] gi|316945743|gb|ADU65219.1| polar amino acid ABC transporter, inner membrane subunit [Desulfurispirillum indicum S5] Length = 260 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 35/119 (29%), Positives = 70/119 (58%) Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 L+ ++ A+I+EI+R+G+ ++ + Q+++A +LG T + R V++PQ +R I+PPL Q+ Sbjct: 137 LALFSGAYISEIIRAGVESISQSQIDSARSLGFTPWQIYRHVIIPQVLRRILPPLAGQFA 196 Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 +L+K+SSL + ++ + T +E L YL L++ ++L+ + K Sbjct: 197 SLIKDSSLLSIIAISEFTLNAQEVNAFTFSTLESYLPLALGYLILTLPVSLYSRHMERK 255 >gi|190891792|ref|YP_001978334.1| octopine ABC transporter, permease protein [Rhizobium etli CIAT 652] gi|190697071|gb|ACE91156.1| octopine ABC transporter, permease protein [Rhizobium etli CIAT 652] Length = 241 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 59/231 (25%), Positives = 111/231 (48%), Gaps = 22/231 (9%) Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS---TFLIFGL 232 L+ +T+ + F+ ++G V++ +LSRH LP+ +++ T ++ G+ Sbjct: 23 LTAAAMTIGVSVCGFLTGTLIGTVITFM--QLSRH--------LPIRWLADCYTTVLRGV 72 Query: 233 PTLVLIALKYQ-----LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287 P L++I L Y L + G FIG P F++ +AL +AA+ AE+ R Sbjct: 73 PDLLVIYLFYFGGSAFLGSLGGLFGYHGFIG----MPAFLTGTLALGVVSAAYQAEVFRG 128 Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347 +V RG++EAA A+G+ R ++ P +R IP L + + +LK S+L G Sbjct: 129 AYRSVARGELEAASAVGMRPWPKFRRIVAPLVLRYAIPGLGNTWQLVLKESALISVTGLV 188 Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 +L+ T + E L + +YL ++ + ++ R+ A+ ++ Sbjct: 189 ELLRQSQIAAGSTRRPFEFYLTAVVLYLVITWLSSILFRRMEARTIQGTRR 239 Score = 37.7 bits (86), Expect = 3.0, Method: Compositional matrix adjust. Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 13/73 (17%) Query: 90 LVGFVNTFW-------------LAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136 LVGF T W ++ G + T+IGT++ +LS + + W+ Y V Sbjct: 10 LVGFEQTGWGWLLLTAAAMTIGVSVCGFLTGTLIGTVITFMQLSRHLPIRWLADCYTTVL 69 Query: 137 RNIPPLVVIFFLY 149 R +P L+VI+ Y Sbjct: 70 RGVPDLLVIYLFY 82 >gi|171320701|ref|ZP_02909715.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria MEX-5] gi|171094061|gb|EDT39157.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria MEX-5] Length = 244 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 42/117 (35%), Positives = 69/117 (58%), Gaps = 2/117 (1%) Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316 +GG+ ++P F+ I +S + AF AE +R+GL AVPR +EAA +LG + R+ V L Sbjct: 103 LGGNPLTP-FVWSVIVISLHKGAFHAEALRAGLEAVPRATLEAAQSLGYSRRQRLWHVQL 161 Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI-ILIWMF 372 P A+R +P L + ++L+K +++A A+ D+ I Q +E+ ILI +F Sbjct: 162 PLAVRFALPALVNNLVDLVKMTTVASAIAVGDVTYASIMIWTQRDNVLELMILILLF 218 >gi|325523118|gb|EGD01519.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia sp. TJI49] Length = 185 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 35/95 (36%), Positives = 60/95 (63%), Gaps = 4/95 (4%) Query: 251 LGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306 +GQF+F+ S + P ++ IAL+ TA + AEI+R GL+AVP GQ+EA ++GL+ Sbjct: 78 VGQFDFVRHSLLWPVLREPYLCAVIALALCTAGYTAEIIRGGLMAVPVGQIEAGYSIGLS 137 Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341 R ++ P A+R +P T++ + +K+++LA Sbjct: 138 GFALLRRIIAPIALRQCLPAYTTEAILQVKSTALA 172 >gi|227820555|ref|YP_002824526.1| amino acid ABC transporter permease [Sinorhizobium fredii NGR234] gi|227339554|gb|ACP23773.1| amino acid ABC transporter, permease protein [Sinorhizobium fredii NGR234] Length = 220 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 40/135 (29%), Positives = 73/135 (54%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P ++ I L + + AE+ R+G+ VPRGQ EAA A LT R+ V+LPQA+ + Sbjct: 86 PALVAGVIGLGIHYGTYAAEVYRAGIENVPRGQWEAAKATNLTARQTWIHVILPQAIPPM 145 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 IP L + + + K + L A+ +L++ +I N + IE + + +L +S++ + Sbjct: 146 IPALANYLIAMFKETPLLSAITVLELMNQAKSIANSNYRYIEPMTLVGVFFLVMSLISVI 205 Query: 384 FMNRLNAKIALKEKK 398 F+ L + A +++ Sbjct: 206 FLRWLEERYARVDER 220 >gi|150375847|ref|YP_001312443.1| ectoine/hydroxyectoine ABC transporter permease EhuD [Sinorhizobium medicae WSM419] gi|150030394|gb|ABR62510.1| Ectoine/hydroxyectoine ABC transporter permease protein EhuD [Sinorhizobium medicae WSM419] Length = 220 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 40/135 (29%), Positives = 73/135 (54%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P ++ I L + + AE+ R+G+ VPRGQ EAA A LT R+ V+LPQA+ + Sbjct: 86 PALVAGVIGLGIHYGTYAAEVYRAGIENVPRGQWEAAKATNLTARQTWIHVILPQAIPPM 145 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 IP L + + + K + L A+ +L++ +I N + IE + + +L +S++ + Sbjct: 146 IPALANYLIAMFKETPLLSAITVLELMNQAKSIANSNYRYIEPMTLVGVFFLIMSLISVV 205 Query: 384 FMNRLNAKIALKEKK 398 F+ L + + E++ Sbjct: 206 FLRWLEERYSRVEQR 220 >gi|319778835|ref|YP_004129748.1| Histidine ABC transporter, permease protein HisQ [Taylorella equigenitalis MCE9] gi|317108859|gb|ADU91605.1| Histidine ABC transporter, permease protein HisQ [Taylorella equigenitalis MCE9] Length = 228 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 39/125 (31%), Positives = 68/125 (54%), Gaps = 8/125 (6%) Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 AF E R +AVP+GQ EA+IA GL+ + ++ PQ MR +P + + +L +LK Sbjct: 105 GAFFGETFRGAFLAVPKGQYEASIAYGLSQHRTMWHIMFPQMMRYALPGVGNNWLIVLKA 164 Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF----IYLSLSIMIALFMNRLNAKIA 393 ++L +G DLV V + G+A + + +++F IYL L+ + +F+ L + + Sbjct: 165 TALVSILGLQDLVLV----TQEAGRATQKMFLFIFVAGVIYLLLTTISNIFLYWLERRYS 220 Query: 394 LKEKK 398 K+ Sbjct: 221 AGIKE 225 >gi|239983306|ref|ZP_04705830.1| glutamate transporter permease [Streptomyces albus J1074] Length = 290 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 59/221 (26%), Positives = 105/221 (47%), Gaps = 42/221 (19%) Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI---FGLPTLVLI 238 T+ A V S VLG VL++ RLS H P+ +++T ++ +P LV+I Sbjct: 76 TLKAFAYASVLSLVLGGVLAV--GRLSDH--------RPVRWVATVIVEFFRAMPVLVMI 125 Query: 239 -----ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293 AL+ Q +L L+ Y + +AE+ RSG+ +V Sbjct: 126 FFVFVALQVQ---------------------ALPALVTGLTLYNGSVLAEVFRSGVNSVD 164 Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353 +GQ EAA ALG+ + VL PQA+R+++P + SQ + LK++SL + + + + G Sbjct: 165 KGQREAAYALGMRKTQVMVQVLAPQALRAMLPAIISQLVVALKDTSLGYLITYEEFLHAG 224 Query: 354 GTIINQTGQAIEIILIWMF---IYLSLSIMIALFMNRLNAK 391 I + + I + M IY+ + ++++ F ++ + Sbjct: 225 KLIASNLDYDLPFIPVVMVISPIYIGMCMLLSWFAQWVSRR 265 Score = 41.6 bits (96), Expect = 0.21, Method: Compositional matrix adjust. Identities = 18/41 (43%), Positives = 29/41 (70%) Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 ++G ++ GRLS ++ V W+ V VE FR +P LV+IFF++ Sbjct: 89 VLGGVLAVGRLSDHRPVRWVATVIVEFFRAMPVLVMIFFVF 129 >gi|256830363|ref|YP_003159091.1| polar amino acid ABC transporter, inner membrane subunit [Desulfomicrobium baculatum DSM 4028] gi|256579539|gb|ACU90675.1| polar amino acid ABC transporter, inner membrane subunit [Desulfomicrobium baculatum DSM 4028] Length = 249 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 55/196 (28%), Positives = 90/196 (45%), Gaps = 23/196 (11%) Query: 220 PLLYI----STF--LIFGLPTLVLIALKYQLHFDK--PVLGQFN---------------F 256 P LY+ ST+ L LP LVLI L Y D+ P +G + Sbjct: 48 PSLYLRLVGSTYVELCRNLPPLVLIFLCYFFLADQIAPTIGLQDALRTAPDTVKAVAGVL 107 Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316 IG F++ L Y A++AEIVR G+ +V GQ EA A G +++ Sbjct: 108 IGRLDQVDAFVTAAFTLGLYEGAYVAEIVRGGIRSVDAGQWEAGRAQGFPRFGLMVFIIM 167 Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376 PQA+R++IPPL Q ++ +K+S++ + +L G ++ T +E+ +Y Sbjct: 168 PQAVRNMIPPLAGQIISTIKDSAIVSVISIQELTFQGMQLMATTYLTMEVWTCVALLYFV 227 Query: 377 LSIMIALFMNRLNAKI 392 L+ ++ RL ++ Sbjct: 228 LTFSCSMGAARLEHRL 243 >gi|294791035|ref|ZP_06756193.1| glutamate transport system permease protein GluD [Scardovia inopinata F0304] gi|294458932|gb|EFG27285.1| glutamate transport system permease protein GluD [Scardovia inopinata F0304] Length = 443 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 32/88 (36%), Positives = 60/88 (68%) Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322 S + ++ I+L Y + +AE+VRSG+ ++P GQ EAA+ALGLT ++ L+ +PQA+ + Sbjct: 147 SSSYWAVTISLILYNGSVVAELVRSGVGSLPDGQREAALALGLTRTRSLMLIEVPQALYA 206 Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLV 350 ++P +Q + +LK+++L + + DL+ Sbjct: 207 MLPAAITQLVVVLKDTALGSIILYTDLL 234 >gi|154502490|ref|ZP_02039550.1| hypothetical protein RUMGNA_00303 [Ruminococcus gnavus ATCC 29149] gi|153796886|gb|EDN79306.1| hypothetical protein RUMGNA_00303 [Ruminococcus gnavus ATCC 29149] Length = 215 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 35/112 (31%), Positives = 68/112 (60%), Gaps = 5/112 (4%) Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304 +F L Q N IGG ++ ++ + S AA+ AEI RSG+ ++P+GQ EAA LG Sbjct: 70 YFAPYYLWQMN-IGGYKLT----AILLGCSLNYAAYFAEIYRSGIESIPKGQYEAATLLG 124 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356 + + ++LPQ +++++P +T++ + L+K++SL ++ + ++ +V I Sbjct: 125 YSRGQTFFRIVLPQMVKNVLPSVTNEVITLVKDTSLVYSLSYIEMFAVAKQI 176 >gi|66047102|ref|YP_236943.1| amino acid ABC transporter permease [Pseudomonas syringae pv. syringae B728a] gi|289676779|ref|ZP_06497669.1| amino acid ABC transporter permease [Pseudomonas syringae pv. syringae FF5] gi|302188857|ref|ZP_07265530.1| amino acid ABC transporter permease [Pseudomonas syringae pv. syringae 642] gi|63257809|gb|AAY38905.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Pseudomonas syringae pv. syringae B728a] gi|330898593|gb|EGH30012.1| amino acid ABC transporter permease [Pseudomonas syringae pv. japonica str. M301072PT] gi|330949982|gb|EGH50242.1| amino acid ABC transporter permease [Pseudomonas syringae Cit 7] Length = 242 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 53/156 (33%), Positives = 79/156 (50%), Gaps = 8/156 (5%) Query: 224 ISTFLIFGLPTLVLIALK-YQLHFDKPVLG---QFNFIGGSTVSPEFMSLYIALSCYTAA 279 I T LI G+P LVL+ L Y L +L ++ +I ++P F + I L A Sbjct: 65 IYTTLIRGVPDLVLMLLIFYSLQTWLTMLTDAMEWEYI---EINP-FGAGVITLGFIYGA 120 Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339 + E R +++VPRGQ+EAA A GL + R V+ PQ MR +P + + + LLK ++ Sbjct: 121 YFTETFRGAILSVPRGQVEAATAYGLKRGQRFRYVVFPQMMRYALPGIGNNWQVLLKATA 180 Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375 L +G ADLV T Q +++ IYL Sbjct: 181 LVSIIGLADLVKASQDAGKSTYQLFYFLVLAALIYL 216 >gi|15800617|ref|NP_286631.1| arginine transporter permease subunit ArtQ [Escherichia coli O157:H7 EDL933] gi|15830199|ref|NP_308972.1| arginine transporter permease subunit ArtQ [Escherichia coli O157:H7 str. Sakai] gi|168750051|ref|ZP_02775073.1| arginine ABC transporter, permease protein ArtQ [Escherichia coli O157:H7 str. EC4113] gi|168756661|ref|ZP_02781668.1| arginine ABC transporter, permease protein ArtQ [Escherichia coli O157:H7 str. EC4401] gi|168763283|ref|ZP_02788290.1| arginine ABC transporter, permease protein ArtQ [Escherichia coli O157:H7 str. EC4501] gi|168767377|ref|ZP_02792384.1| arginine ABC transporter, permease protein ArtQ [Escherichia coli O157:H7 str. EC4486] gi|168776408|ref|ZP_02801415.1| arginine ABC transporter, permease protein ArtQ [Escherichia coli O157:H7 str. EC4196] gi|168779419|ref|ZP_02804426.1| arginine ABC transporter, permease protein ArtQ [Escherichia coli O157:H7 str. EC4076] gi|168787088|ref|ZP_02812095.1| arginine ABC transporter, permease protein ArtQ [Escherichia coli O157:H7 str. EC869] gi|168799851|ref|ZP_02824858.1| arginine ABC transporter, permease protein ArtQ [Escherichia coli O157:H7 str. EC508] gi|195936911|ref|ZP_03082293.1| arginine transporter permease subunit ArtQ [Escherichia coli O157:H7 str. EC4024] gi|208805959|ref|ZP_03248296.1| arginine ABC transporter, permease protein ArtQ [Escherichia coli O157:H7 str. EC4206] gi|208815342|ref|ZP_03256521.1| arginine ABC transporter, permease protein ArtQ [Escherichia coli O157:H7 str. EC4045] gi|208822579|ref|ZP_03262898.1| arginine ABC transporter, permease protein ArtQ [Escherichia coli O157:H7 str. EC4042] gi|209398007|ref|YP_002269535.1| arginine ABC transporter, permease protein ArtQ [Escherichia coli O157:H7 str. EC4115] gi|217326489|ref|ZP_03442573.1| arginine ABC transporter, permease protein ArtQ [Escherichia coli O157:H7 str. TW14588] gi|254792061|ref|YP_003076898.1| arginine transporter permease subunit ArtQ [Escherichia coli O157:H7 str. TW14359] gi|261225516|ref|ZP_05939797.1| arginine transporter subunit; membrane component of ABC superfamily protein [Escherichia coli O157:H7 str. FRIK2000] gi|261258515|ref|ZP_05951048.1| arginine transporter subunit; membrane component of ABC superfamily protein [Escherichia coli O157:H7 str. FRIK966] gi|291281864|ref|YP_003498682.1| Arginine ABC transporter permease protein ArtQ [Escherichia coli O55:H7 str. CB9615] gi|12513883|gb|AAG55241.1|AE005267_6 arginine 3rd transport system permease protein [Escherichia coli O157:H7 str. EDL933] gi|13360404|dbj|BAB34368.1| arginine 3rd transport system permease protein [Escherichia coli O157:H7 str. Sakai] gi|187768204|gb|EDU32048.1| arginine ABC transporter, permease protein ArtQ [Escherichia coli O157:H7 str. EC4196] gi|188015744|gb|EDU53866.1| arginine ABC transporter, permease protein ArtQ [Escherichia coli O157:H7 str. EC4113] gi|189002709|gb|EDU71695.1| arginine ABC transporter, permease protein ArtQ [Escherichia coli O157:H7 str. EC4076] gi|189356305|gb|EDU74724.1| arginine ABC transporter, permease protein ArtQ [Escherichia coli O157:H7 str. EC4401] gi|189363468|gb|EDU81887.1| arginine ABC transporter, permease protein ArtQ [Escherichia coli O157:H7 str. EC4486] gi|189366539|gb|EDU84955.1| arginine ABC transporter, permease protein ArtQ [Escherichia coli O157:H7 str. EC4501] gi|189372987|gb|EDU91403.1| arginine ABC transporter, permease protein ArtQ [Escherichia coli O157:H7 str. EC869] gi|189377763|gb|EDU96179.1| arginine ABC transporter, permease protein ArtQ [Escherichia coli O157:H7 str. EC508] gi|208725760|gb|EDZ75361.1| arginine ABC transporter, permease protein ArtQ [Escherichia coli O157:H7 str. EC4206] gi|208731990|gb|EDZ80678.1| arginine ABC transporter, permease protein ArtQ [Escherichia coli O157:H7 str. EC4045] gi|208738064|gb|EDZ85747.1| arginine ABC transporter, permease protein ArtQ [Escherichia coli O157:H7 str. EC4042] gi|209159407|gb|ACI36840.1| arginine ABC transporter, permease protein ArtQ [Escherichia coli O157:H7 str. EC4115] gi|209775308|gb|ACI85966.1| arginine 3rd transport system permease protein [Escherichia coli] gi|209775310|gb|ACI85967.1| arginine 3rd transport system permease protein [Escherichia coli] gi|209775312|gb|ACI85968.1| arginine 3rd transport system permease protein [Escherichia coli] gi|209775314|gb|ACI85969.1| arginine 3rd transport system permease protein [Escherichia coli] gi|209775316|gb|ACI85970.1| arginine 3rd transport system permease protein [Escherichia coli] gi|217322710|gb|EEC31134.1| arginine ABC transporter, permease protein ArtQ [Escherichia coli O157:H7 str. TW14588] gi|254591461|gb|ACT70822.1| arginine transporter subunit; membrane component of ABC superfamily [Escherichia coli O157:H7 str. TW14359] gi|290761737|gb|ADD55698.1| Arginine ABC transporter, permease protein ArtQ [Escherichia coli O55:H7 str. CB9615] gi|320192653|gb|EFW67294.1| Arginine ABC transporter, permease protein ArtQ [Escherichia coli O157:H7 str. EC1212] gi|320637732|gb|EFX07524.1| arginine transporter permease subunit ArtQ [Escherichia coli O157:H7 str. G5101] gi|320642855|gb|EFX12056.1| arginine transporter permease subunit ArtQ [Escherichia coli O157:H- str. 493-89] gi|320648312|gb|EFX16967.1| arginine transporter permease subunit ArtQ [Escherichia coli O157:H- str. H 2687] gi|320654150|gb|EFX22218.1| arginine transporter permease subunit ArtQ [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320659774|gb|EFX27330.1| arginine transporter permease subunit ArtQ [Escherichia coli O55:H7 str. USDA 5905] gi|320664244|gb|EFX31395.1| arginine transporter permease subunit ArtQ [Escherichia coli O157:H7 str. LSU-61] gi|326338244|gb|EGD62073.1| Arginine ABC transporter, permease protein ArtQ [Escherichia coli O157:H7 str. 1125] gi|326346221|gb|EGD69959.1| Arginine ABC transporter, permease protein ArtQ [Escherichia coli O157:H7 str. 1044] Length = 238 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 54/187 (28%), Positives = 98/187 (52%), Gaps = 10/187 (5%) Query: 217 KALPLLYISTFLIFGLPTLVL-IALKYQLHF---DKPVLGQF-NFIGGSTVSPEFMSLYI 271 + LP + + F+ FG L+L ++ + ++ + PV Q NF VSP F+ I Sbjct: 55 RGLPEILVVLFIYFGSSQLLLTLSDGFTINLGIVEIPVQMQIENF----DVSP-FLCGVI 109 Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 ALS AA+ ++ +R L AVP GQ E+ ALGL+ +++PQ R +P L +Q+ Sbjct: 110 ALSLLYAAYASQTLRGALKAVPMGQWESGQALGLSKSAIFFRLVMPQMWRHALPGLGNQW 169 Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 L LLK+++L + DL+ +I +T + ++ IYL ++++ + R++ + Sbjct: 170 LVLLKDTALVSLISVNDLMLQTKSIATRTQEPFTWYIVAAAIYLVITLLSQYILKRIDLR 229 Query: 392 IALKEKK 398 E++ Sbjct: 230 ATRFERR 236 >gi|170734488|ref|YP_001766435.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia cenocepacia MC0-3] gi|169817730|gb|ACA92313.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia cenocepacia MC0-3] Length = 226 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 47/149 (31%), Positives = 83/149 (55%), Gaps = 14/149 (9%) Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252 SF +G++L+ F T L+R F + +A+ YI +L G P LV + + + + P +G Sbjct: 30 SFAIGLLLA-FGTALTRLFGPRWAQAVVRFYI--WLFRGSPLLVQL---FVIFYGLPNVG 83 Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312 V + I S A+ AE++R + ++P+GQ EAA ++ +T +A R Sbjct: 84 --------IVLDPLTAAVIGFSLNVGAYNAEVIRGVIESMPKGQWEAAYSMSMTRAQALR 135 Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341 +LPQA R +P L++ +++L+K++SLA Sbjct: 136 RAILPQAARVALPALSNSFISLVKDTSLA 164 >gi|19553157|ref|NP_601159.1| glutamate ABC-type transporter, permease component [Corynebacterium glutamicum ATCC 13032] gi|62390792|ref|YP_226194.1| glutamate permease [Corynebacterium glutamicum ATCC 13032] gi|22002045|sp|P48244|GLUC_CORGL RecName: Full=Glutamate transport system permease protein gluC gi|21324722|dbj|BAB99345.1| ABC-type transporter, permease components (glutamate) [Corynebacterium glutamicum ATCC 13032] gi|41326130|emb|CAF20293.1| GLUTAMATE PERMEASE [Corynebacterium glutamicum ATCC 13032] Length = 228 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 42/123 (34%), Positives = 73/123 (59%), Gaps = 3/123 (2%) Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335 YT+ F+AE +RSG+ V GQ EAA +LGL R ++ PQA+R+ I PL + + L Sbjct: 107 YTSTFVAESLRSGINTVHFGQAEAARSLGLGFGATFRSIIFPQAVRAAIVPLGNTLIALT 166 Query: 336 KNSSLA--VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393 KN+++A + VG A L+ + TI N + I+ ++ L++ + L + +L+ ++A Sbjct: 167 KNTTIASVIGVGEASLL-MKATIENHANMLFVVFAIFAVGFMILTLPMGLGLGKLSERLA 225 Query: 394 LKE 396 +K+ Sbjct: 226 VKK 228 >gi|315650944|ref|ZP_07903984.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Eubacterium saburreum DSM 3986] gi|315486790|gb|EFU77132.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Eubacterium saburreum DSM 3986] Length = 216 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 34/115 (29%), Positives = 67/115 (58%), Gaps = 1/115 (0%) Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 AA+ AEI RSG+ ++ GQ EAA LG T + +++LPQ ++ I+P +T++ + L+K+ Sbjct: 99 AAYFAEIYRSGIQSMSGGQYEAAKILGYTKSQTFFVIILPQVIKRILPSVTNEVITLVKD 158 Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 +SLA + A++ ++ + + T + +F Y+ + ++A M + K+ Sbjct: 159 TSLAFTISVAEMFTMAKALASSTTSMYPFVCAALFYYI-FNAIVAFVMEFIEKKL 212 >gi|323526411|ref|YP_004228564.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia sp. CCGE1001] gi|323383413|gb|ADX55504.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. CCGE1001] Length = 218 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 37/116 (31%), Positives = 65/116 (56%) Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 + A+IAEIVR ++VPRG EA +ALG+ + V+ P A+R + P L +Q++ LK Sbjct: 100 SGAYIAEIVRGSFLSVPRGLKEAGLALGMPAWRVLAFVVGPVAIRRMTPALGNQFIVSLK 159 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 ++SL + +G +L G I+ +A+EI +YL + + + R+ ++ Sbjct: 160 DTSLFIVIGVGELTRQGQEIMASNFRAVEIWTAVAALYLCMIGTLTYCLRRMERRM 215 >gi|262403804|ref|ZP_06080362.1| arginine ABC transporter permease protein ArtQ [Vibrio sp. RC586] gi|262350308|gb|EEY99443.1| arginine ABC transporter permease protein ArtQ [Vibrio sp. RC586] Length = 229 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 39/89 (43%), Positives = 58/89 (65%), Gaps = 1/89 (1%) Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321 +SP F+S IALS A++ ++ +R L AV RGQ EAA ALG+ A ++LPQA+R Sbjct: 87 ISP-FISGVIALSLIFASYASQTLRGALKAVGRGQREAASALGIPPSHAFIRIVLPQAVR 145 Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 +P L +Q+L LLK+++L +G DL+ Sbjct: 146 HALPGLMNQWLVLLKDTALVSLIGVTDLL 174 >gi|218886665|ref|YP_002435986.1| polar amino acid ABC transporter inner membrane protein [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218757619|gb|ACL08518.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 226 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 37/127 (29%), Positives = 77/127 (60%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + + L +AA+ ++I R ++A+P+GQ+ AA ALG++ A R ++LPQA+R IP Sbjct: 89 FTASCLVLGMTSAAYQSQIFRGAILALPQGQLRAARALGMSDGTAIRSIVLPQALRLSIP 148 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 +++Y LLK+S+LA +G ++++ + ++T + + + + +Y ++++ + Sbjct: 149 GWSNEYSILLKDSALAFVLGTPEIMARTHFVASRTYEHLPLYMTAGALYFVITLIGLKVL 208 Query: 386 NRLNAKI 392 RL K+ Sbjct: 209 RRLEHKL 215 >gi|167589673|ref|ZP_02382061.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ubonensis Bu] Length = 228 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 43/139 (30%), Positives = 69/139 (49%), Gaps = 24/139 (17%) Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286 F+ FGLP L +H D E+ + +A++ A+ EIVR Sbjct: 78 FIFFGLPAL-------GVHID-----------------EYTAAILAMTLNLGAYSVEIVR 113 Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346 +G+ AVP G +EAA AL ++ + R V+LPQA+ + P L+SQ + + S++ + Sbjct: 114 AGVAAVPNGHLEAASALAMSRAQMLRHVVLPQALAKVFPALSSQIVITMLGSAVVSQISV 173 Query: 347 ADLVSVGGTIINQTGQAIE 365 ADL G I ++ +A E Sbjct: 174 ADLTYAAGYIQSRNFRAFE 192 >gi|326317639|ref|YP_004235311.1| polar amino acid ABC transporter inner membrane subunit [Acidovorax avenae subsp. avenae ATCC 19860] gi|323374475|gb|ADX46744.1| polar amino acid ABC transporter, inner membrane subunit [Acidovorax avenae subsp. avenae ATCC 19860] Length = 272 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 51/194 (26%), Positives = 89/194 (45%), Gaps = 28/194 (14%) Query: 186 NAKIFVFSFVLGIVLSL----------FATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235 N +I V + LG + L A R++ H + + P+L + F + P Sbjct: 68 NIEISVLAVALGTAVGLVVGALSLSPVHAVRVAARCHVQVFRNAPILVLIYFTTYVFP-- 125 Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295 +++H V F F P+++ + + L+ T+A +AEI R + ++P Sbjct: 126 ------FEVHL---VQWTFPF-------PDWVKVVLGLALPTSANVAEIFRGAIQSIPAA 169 Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355 Q EAA +L + RLV+LPQ +R ++PP + Y ++ ++SLA VG D+V Sbjct: 170 QWEAAQSLAFRRSQIFRLVVLPQCVRRMLPPWMNLYASITMSTSLASLVGVHDVVDTAQI 229 Query: 356 IINQTGQAIEIILI 369 N + IL+ Sbjct: 230 ASNTVARTDFTILV 243 >gi|168218287|ref|ZP_02643912.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Clostridium perfringens NCTC 8239] gi|182379709|gb|EDT77188.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Clostridium perfringens NCTC 8239] Length = 213 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 37/127 (29%), Positives = 69/127 (54%), Gaps = 1/127 (0%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 F + IA + AA+ EI RSG+ + RGQ EA+ LGL+ + ++LPQ+ + + Sbjct: 83 RFPAAIIAFTLNYAAYFGEIFRSGIKDIDRGQFEASKILGLSKWFTFKKIILPQSFKKTL 142 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 P + ++ + L+K++SL VG +L+ G N+ + + I + L ++++ +F Sbjct: 143 PSIANEVITLVKDTSLVYVVGIGELLRAGKIASNRDASLLPLFSIGIIYLLLIAVLTKIF 202 Query: 385 MNRLNAK 391 +RL K Sbjct: 203 -DRLEKK 208 >gi|147678666|ref|YP_001212881.1| ABC-type amino acid transport/signal transduction system [Pelotomaculum thermopropionicum SI] gi|146274763|dbj|BAF60512.1| ABC-type amino acid transport/signal transduction system [Pelotomaculum thermopropionicum SI] Length = 762 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 36/113 (31%), Positives = 66/113 (58%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IA A+++E+ R+G+ +V RGQ EA IA+G T K ++LPQA R+I+P + Sbjct: 629 IAFGMNFGAYVSEMFRTGIESVDRGQTEAGIAMGFTRVKTFLYIVLPQAARNILPVYKGE 688 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 +++L+K +S+ + DL G I ++T A +++ +Y +S +++L Sbjct: 689 FISLVKMTSVVGYIAVQDLTKAGDIIRSRTFDAFFPLVMVAVLYFFISWLLSL 741 >gi|71737589|ref|YP_273644.1| amino acid ABC transporter permease [Pseudomonas syringae pv. phaseolicola 1448A] gi|71558142|gb|AAZ37353.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. phaseolicola 1448A] Length = 237 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 53/156 (33%), Positives = 79/156 (50%), Gaps = 8/156 (5%) Query: 224 ISTFLIFGLPTLVLIALK-YQLHFDKPVLG---QFNFIGGSTVSPEFMSLYIALSCYTAA 279 I T LI G+P LVL+ L Y L +L ++ +I ++P F + I L A Sbjct: 60 IYTTLIRGIPDLVLMLLIFYSLQTWLTMLTDAMEWEYI---EINP-FGAGVITLGFIYGA 115 Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339 + E R +++VPRGQ+EAA A GL + R V+ PQ MR +P + + + LLK ++ Sbjct: 116 YFTETFRGAILSVPRGQVEAATAYGLKRGQRFRYVVFPQMMRYALPGIGNNWQVLLKATA 175 Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375 L +G ADLV T Q +++ IYL Sbjct: 176 LVSIIGLADLVKASQDAGKSTYQLFYFLVLAALIYL 211 >gi|307320839|ref|ZP_07600249.1| polar amino acid ABC transporter, inner membrane subunit [Sinorhizobium meliloti AK83] gi|306893549|gb|EFN24325.1| polar amino acid ABC transporter, inner membrane subunit [Sinorhizobium meliloti AK83] Length = 219 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 38/129 (29%), Positives = 71/129 (55%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + +AL+ + ++ + E+VR L ++P+GQ EAA A+GLT + VL PQA+R +P Sbjct: 89 FQAGVLALAVFCSSHVGELVRGALQSIPKGQTEAAKAIGLTFAQTFTYVLGPQALRQALP 148 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 + ++K S+L +G ++L+ +I++T ++E F+Y ++ I F Sbjct: 149 AWVNTAAEMVKASTLLSIIGVSELLLRTQELISRTFMSLEFYFFAGFLYFVINYGIERFG 208 Query: 386 NRLNAKIAL 394 + K A+ Sbjct: 209 RYVERKTAV 217 >gi|184154545|ref|YP_001842885.1| glutamine ABC transporter permease component [Lactobacillus fermentum IFO 3956] gi|183225889|dbj|BAG26405.1| glutamine ABC transporter permease component [Lactobacillus fermentum IFO 3956] Length = 418 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 47/177 (26%), Positives = 88/177 (49%), Gaps = 23/177 (12%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 + +P++ ++ F+ G+P+++ G + P F + + L Sbjct: 265 RGMPMIVLAFFIYIGMPSVI----------------------GHKI-PLFTAGILTLMLD 301 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 A++ IV+ G AV RGQ EAA +LGL + K V++PQ ++ ++P L +Q + LK Sbjct: 302 EGAYVGAIVKGGFQAVDRGQWEAARSLGLPYYKTLVKVIMPQGIKIMVPSLVNQLIITLK 361 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393 ++S+ A+G +L G II + + +I LI IY+ + ++ N + K+A Sbjct: 362 DTSILSAIGVMELTQTGTVIIARNMEGFKIWLIIGVIYIIIITLLTWLSNYVQRKMA 418 >gi|297199925|ref|ZP_06917322.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Streptomyces sviceus ATCC 29083] gi|197710393|gb|EDY54427.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Streptomyces sviceus ATCC 29083] Length = 231 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 40/122 (32%), Positives = 62/122 (50%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +AL A+ +EIVR L AV Q E IAL T + RL+LLPQA+ +IPP ++ Sbjct: 88 LALGLTYGAYGSEIVRGALGAVDPAQQEGGIALSFTPWQRMRLILLPQAVPEMIPPFSNL 147 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 + LLK ++L +G DL G + ++ I + IY ++ ++ M L Sbjct: 148 LIELLKGTALVSVMGMGDLAFSGNLVRLALQESAGIYTYLLLIYFVIAFLLTRLMRGLEK 207 Query: 391 KI 392 K+ Sbjct: 208 KL 209 >gi|119025600|ref|YP_909445.1| permease protein of ABC transporter for glutamate [Bifidobacterium adolescentis ATCC 15703] gi|154487062|ref|ZP_02028469.1| hypothetical protein BIFADO_00900 [Bifidobacterium adolescentis L2-32] gi|118765184|dbj|BAF39363.1| permease protein of ABC transporter for glutamate [Bifidobacterium adolescentis ATCC 15703] gi|154084925|gb|EDN83970.1| hypothetical protein BIFADO_00900 [Bifidobacterium adolescentis L2-32] Length = 375 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 31/89 (34%), Positives = 59/89 (66%) Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322 SP + ++ +AL Y + +AE+VRSG+ +P GQ EA++ALGLT ++ + +PQA+ + Sbjct: 141 SPAYWAVVLALVIYNGSVVAELVRSGVGNLPNGQREASLALGLTRTQSLLQIEVPQAIYA 200 Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 ++P +Q + +LK+++L + + DL+ Sbjct: 201 MLPAAVTQLVVVLKDTALGSIIMYTDLLQ 229 >gi|50086542|ref|YP_048052.1| amino acid ABC transporter membrane protein [Acinetobacter sp. ADP1] gi|49532516|emb|CAG70230.1| putative amino acid transport protein (ABC superfamily, membrane) [Acinetobacter sp. ADP1] Length = 221 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 45/135 (33%), Positives = 71/135 (52%), Gaps = 8/135 (5%) Query: 233 PTLVLIALKYQLHFD-KPVLGQF--NFIG----GSTVSPEFMSLYIALSCYTAAFIAEIV 285 P L +A+ Y F P+L Q F G G +SP + + +L+ Y AA+ AEI Sbjct: 49 PILQKVAIVYIEFFQGTPLLIQLFMTFFGLSLLGIDISP-WTAAAFSLTAYAAAYFAEIW 107 Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345 R + ++P GQ EAA +L +T + R V+LPQA+R I P + ++K +++ +G Sbjct: 108 RGCVQSIPVGQWEAAASLAMTRLQQFRYVILPQAIRIAIAPTVGFSVQIVKATAVTSIIG 167 Query: 346 FADLVSVGGTIINQT 360 F +L G + N T Sbjct: 168 FTELTKTGSVLANAT 182 >gi|154246381|ref|YP_001417339.1| polar amino acid ABC transporter, inner membrane subunit [Xanthobacter autotrophicus Py2] gi|154160466|gb|ABS67682.1| polar amino acid ABC transporter, inner membrane subunit [Xanthobacter autotrophicus Py2] Length = 219 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 35/105 (33%), Positives = 59/105 (56%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P ++ +++S Y + ++ EI R + AVP+ Q E+ +L LT + ++LPQA+R Sbjct: 85 PAIVAAGLSMSIYASGYLGEIWRGCIQAVPKPQWESGESLALTIPQQYLYIILPQAIRIS 144 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368 +PP + L+KN+S+A +GF +L G I N T Q + L Sbjct: 145 LPPTVGFLVQLVKNTSIAALIGFVELTRAGQLINNATFQPFRVFL 189 >gi|322373222|ref|ZP_08047758.1| ABC-type amino acid transport system permease component [Streptococcus sp. C150] gi|321278264|gb|EFX55333.1| ABC-type amino acid transport system permease component [Streptococcus sp. C150] Length = 228 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 38/125 (30%), Positives = 70/125 (56%), Gaps = 1/125 (0%) Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321 V+P + + +I S T ++EI+RS L+ V +GQ+EAA A+GLT R+A ++ PQA++ Sbjct: 96 VNPLYYA-FIIYSLMTTGSLSEIIRSALLTVDKGQLEAAQAIGLTTRQAYLRIVFPQALK 154 Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 + +P L + +N++K +SL + D+ ++ Q E + +YL + +I Sbjct: 155 AALPNLCNLVINIVKGTSLVFVMTIKDITAIARVEAAYGYQYFESYFVIFILYLIICGII 214 Query: 382 ALFMN 386 + N Sbjct: 215 QVLFN 219 >gi|302339795|ref|YP_003805001.1| polar amino acid ABC transporter inner membrane subunit [Spirochaeta smaragdinae DSM 11293] gi|301636980|gb|ADK82407.1| polar amino acid ABC transporter, inner membrane subunit [Spirochaeta smaragdinae DSM 11293] Length = 213 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 33/103 (32%), Positives = 61/103 (59%), Gaps = 1/103 (0%) Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316 I G ++SP F++ + A+ EI R G+ ++ GQ EAA AL + + + R ++L Sbjct: 76 IFGISLSP-FLAASLTFVLNYGAYFMEIFRGGIESIDSGQYEAAKALNMNYWQTMRRIIL 134 Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359 PQA+R ++PP T++ + L+K+++L V +G +L+ I + Sbjct: 135 PQAVRVVLPPTTNEAITLVKDTALVVVIGMGELLRSAKEIFTR 177 >gi|293365295|ref|ZP_06612012.1| amino acid ABC superfamily ATP binding cassette transporter, permease protein [Streptococcus oralis ATCC 35037] gi|291316745|gb|EFE57181.1| amino acid ABC superfamily ATP binding cassette transporter, permease protein [Streptococcus oralis ATCC 35037] Length = 210 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 61/217 (28%), Positives = 107/217 (49%), Gaps = 29/217 (13%) Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF---GLPTLV 236 ++T+ A + +FS LGIV++ FA ++ PL Y+ I+ G P L+ Sbjct: 13 SMTLQVFALVLIFSIPLGIVVA-FALQVRWE---------PLHYLIDLYIWVMRGTPLLL 62 Query: 237 -LIALKYQLHFDKPVLG-QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294 LI + Y L P +G + + + + IA AA+ AEI R G+ +P+ Sbjct: 63 QLIFIYYVL----PSIGIRLDRLPAAV---------IAFVLNYAAYFAEIFRGGIETIPK 109 Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354 GQ EAA L + R ++LPQ + ++P + ++ ++L+K++SL A+G +DL+ Sbjct: 110 GQYEAAKVLKFSPFDTVRYIILPQVTKIVLPSVFNEIMSLVKDTSLVYALGISDLILASR 169 Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 T N+ + + L IYL + ++ + RL K Sbjct: 170 TAANRDASLVPMFLAGA-IYLIMIGLVTIVAKRLEKK 205 >gi|239616534|ref|YP_002939856.1| polar amino acid ABC transporter, inner membrane subunit [Kosmotoga olearia TBF 19.5.1] gi|239505365|gb|ACR78852.1| polar amino acid ABC transporter, inner membrane subunit [Kosmotoga olearia TBF 19.5.1] Length = 224 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 61/202 (30%), Positives = 106/202 (52%), Gaps = 21/202 (10%) Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233 RGL +T++ V F++GI+L+L +R + K + + I +I G P Sbjct: 18 RGLG---VTLEMTLISVVAGFLIGILLAL-----ARVYGNALLKGIATVIIE--VIRGTP 67 Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293 LV + + L++ P G +++P +L I S + A+ AE +RS + ++ Sbjct: 68 LLVQL---FILYYGLPPYG-------VSLTPLTAAL-IGFSINSGAYQAEYLRSAINSIQ 116 Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353 QM AA +LG+T +A ++LPQA+R +IP ++++ LLK +SLA VG +L++ Sbjct: 117 HTQMLAARSLGMTKWQAIFNIILPQALRRVIPAWANEFIYLLKYTSLAYIVGAPELMAKA 176 Query: 354 GTIINQTGQAIEIILIWMFIYL 375 I ++ Q E+ L+ IYL Sbjct: 177 KFIASRNFQFFEVYLVVALIYL 198 >gi|169833411|ref|YP_001694086.1| ABC transporter membrane-spanning permease - glutamine transport [Streptococcus pneumoniae Hungary19A-6] gi|168995913|gb|ACA36525.1| ABC transporter membrane-spanning permease - glutamine transport [Streptococcus pneumoniae Hungary19A-6] Length = 219 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 29/73 (39%), Positives = 51/73 (69%) Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 A + +T+A +AEI+R GL AV +GQ EA ++ G T + ++LPQA+R ++P + SQ+ Sbjct: 90 AFTLFTSAALAEIIRGGLNAVDKGQYEAGMSQGFTSDQILYYIILPQAIRKMLPAIISQF 149 Query: 332 LNLLKNSSLAVAV 344 + ++K++SL +V Sbjct: 150 VTVIKDTSLLYSV 162 Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust. Identities = 21/61 (34%), Positives = 36/61 (59%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 I GF T +++ +I +TIIGT++ R N ++ I +Y+E RN+P L+ IF + Sbjct: 16 IFKGFGLTLYISLIAIILSTIIGTVLAVMRNGKNPVLRIISSIYIEFVRNVPNLLWIFTI 75 Query: 149 Y 149 + Sbjct: 76 F 76 >gi|78065759|ref|YP_368528.1| ABC polar amino acid transporter, inner membrane subunit [Burkholderia sp. 383] gi|77966504|gb|ABB07884.1| amino acid ABC transporter membrane protein 1, PAAT family [Burkholderia sp. 383] Length = 229 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 50/189 (26%), Positives = 94/189 (49%), Gaps = 6/189 (3%) Query: 212 HEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQF-NFIGGSTVSPE-FMSL 269 H + +A+ Y T LI +P LVL+ L + + + L QF +F+G + + F++ Sbjct: 42 HNRVLRAIATGY--TTLIRSVPDLVLMLLLF--YSIQIWLNQFTDFVGWDQIDIDPFVAG 97 Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329 + L A+ E R ++VPRGQ+EA A G++ + ++ PQ MR +P + + Sbjct: 98 VLTLGFIYGAYFTETFRGAFLSVPRGQLEAGAAYGMSGARVFARIMFPQMMRFALPGIGN 157 Query: 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 + L+K ++L +G AD+V T IL+ IYL+++ + L + +L Sbjct: 158 NWQVLVKATALVSIIGLADVVKAAQDAGKSTFNMFFFILVAALIYLAITTVSNLVLIQLE 217 Query: 390 AKIALKEKK 398 + ++ + Sbjct: 218 KRYSMGVRH 226 >gi|306823260|ref|ZP_07456636.1| glutamine ABC superfamily ATP binding cassette transporter, permease protein [Bifidobacterium dentium ATCC 27679] gi|309801915|ref|ZP_07696030.1| ABC transporter, permease protein [Bifidobacterium dentium JCVIHMP022] gi|304553892|gb|EFM41803.1| glutamine ABC superfamily ATP binding cassette transporter, permease protein [Bifidobacterium dentium ATCC 27679] gi|308221471|gb|EFO77768.1| ABC transporter, permease protein [Bifidobacterium dentium JCVIHMP022] Length = 377 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 31/89 (34%), Positives = 59/89 (66%) Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322 SP + ++ +AL Y + +AE+VRSG+ +P GQ EA++ALGLT ++ + +PQA+ + Sbjct: 141 SPAYWAVVLALVIYNGSVVAELVRSGVGNLPNGQREASLALGLTRTQSLMQIEVPQAIYA 200 Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 ++P +Q + +LK+++L + + DL+ Sbjct: 201 MLPAAVTQLVVVLKDTALGSIIMYTDLLQ 229 >gi|257790888|ref|YP_003181494.1| polar amino acid ABC transporter, inner membrane subunit [Eggerthella lenta DSM 2243] gi|257474785|gb|ACV55105.1| polar amino acid ABC transporter, inner membrane subunit [Eggerthella lenta DSM 2243] Length = 566 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 30/70 (42%), Positives = 51/70 (72%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +A+ Y +I+E+VRSG+ ++ RGQ EAA + G ++ ++ +++LPQA+R I+PPL Q Sbjct: 98 LAIGIYHGGYISEVVRSGIGSIHRGQFEAAKSQGFSYWQSMFVIILPQAIRIIMPPLAVQ 157 Query: 331 YLNLLKNSSL 340 NL+KN+S+ Sbjct: 158 AANLVKNTSV 167 >gi|23501836|ref|NP_697963.1| amino acid ABC transporter permease [Brucella suis 1330] gi|161618909|ref|YP_001592796.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Brucella canis ATCC 23365] gi|163843221|ref|YP_001627625.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Brucella suis ATCC 23445] gi|254701712|ref|ZP_05163540.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Brucella suis bv. 5 str. 513] gi|254704254|ref|ZP_05166082.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Brucella suis bv. 3 str. 686] gi|254719050|ref|ZP_05180861.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Brucella sp. 83/13] gi|256061052|ref|ZP_05451208.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Brucella neotomae 5K33] gi|256369378|ref|YP_003106886.1| amino acid ABC transporter, permease protein [Brucella microti CCM 4915] gi|260566497|ref|ZP_05836967.1| polar amino acid ABC transporter [Brucella suis bv. 4 str. 40] gi|261325053|ref|ZP_05964250.1| polar amino acid ABC transporter [Brucella neotomae 5K33] gi|261752263|ref|ZP_05995972.1| polar amino acid ABC transporter [Brucella suis bv. 5 str. 513] gi|261754922|ref|ZP_05998631.1| polar amino acid ABC transporter [Brucella suis bv. 3 str. 686] gi|265984042|ref|ZP_06096777.1| polar amino acid ABC transporter [Brucella sp. 83/13] gi|297248902|ref|ZP_06932616.1| polar amino acid transport system permease [Brucella abortus bv. 5 str. B3196] gi|306838981|ref|ZP_07471803.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Brucella sp. NF 2653] gi|306840464|ref|ZP_07473223.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Brucella sp. BO2] gi|306843854|ref|ZP_07476449.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Brucella sp. BO1] gi|23347772|gb|AAN29878.1| amino acid ABC transporter, permease protein [Brucella suis 1330] gi|161335720|gb|ABX62025.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Brucella canis ATCC 23365] gi|163673944|gb|ABY38055.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Brucella suis ATCC 23445] gi|255999538|gb|ACU47937.1| amino acid ABC transporter, permease protein [Brucella microti CCM 4915] gi|260156015|gb|EEW91095.1| polar amino acid ABC transporter [Brucella suis bv. 4 str. 40] gi|261301033|gb|EEY04530.1| polar amino acid ABC transporter [Brucella neotomae 5K33] gi|261742016|gb|EEY29942.1| polar amino acid ABC transporter [Brucella suis bv. 5 str. 513] gi|261744675|gb|EEY32601.1| polar amino acid ABC transporter [Brucella suis bv. 3 str. 686] gi|264662634|gb|EEZ32895.1| polar amino acid ABC transporter [Brucella sp. 83/13] gi|297174266|gb|EFH33617.1| polar amino acid transport system permease [Brucella abortus bv. 5 str. B3196] gi|306275609|gb|EFM57333.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Brucella sp. BO1] gi|306289479|gb|EFM60697.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Brucella sp. BO2] gi|306405948|gb|EFM62205.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Brucella sp. NF 2653] Length = 240 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 37/123 (30%), Positives = 69/123 (56%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F++ +AL +++ +E+ S A+P GQ E A+GL+ R+ R+V+ PQ +R +P Sbjct: 104 FVAGMVALGFVFSSYSSEVFLSAFRAIPHGQYEGGYAVGLSRRQTMRMVIFPQLIRIALP 163 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 L + +L LLK++SL + +D++ T + I +YL+L+I+ + F+ Sbjct: 164 GLANLWLVLLKDTSLVSVITLSDILRQTSIAARVTKEPFLFFGIACLLYLALAIISSYFI 223 Query: 386 NRL 388 NR+ Sbjct: 224 NRI 226 >gi|114567254|ref|YP_754408.1| amino acid ABC transporter permease [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|114338189|gb|ABI69037.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 195 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 39/128 (30%), Positives = 66/128 (51%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + S +A+ AEI R+ + A +GQ+EAA ALG + V LPQAM I+P + Sbjct: 50 VGFSLNFSAYAAEIFRTAIDATDKGQLEAAYALGFSQYAGFFKVTLPQAMLHILPIYKGE 109 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 +++++K +S+ + DL + I ++T A + FIY L+ + M R+ Sbjct: 110 FVSMVKMTSVVGYIAIQDLTKMSDIIRSRTFDAFFPLFATAFIYFVLTYLFIYLMGRVEI 169 Query: 391 KIALKEKK 398 +I K +K Sbjct: 170 QIDPKRRK 177 >gi|307132298|ref|YP_003884314.1| putative amino acid ABC transporter permease [Dickeya dadantii 3937] gi|306529827|gb|ADM99757.1| Putative amino acid ABC transporter, permease protein [Dickeya dadantii 3937] Length = 218 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 37/108 (34%), Positives = 61/108 (56%), Gaps = 1/108 (0%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G VSP + + +AL+ +T+AF+ +I + A+P+GQ EA LGL+ + V+ PQ Sbjct: 80 GIDVSP-WTAAALALTLFTSAFLLDIWHGSVQALPKGQWEACRCLGLSFTQTLTRVIAPQ 138 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 AMR I P + ++K ++LA +GF +L G + N T Q ++ Sbjct: 139 AMRIAIAPTVGFSVQVIKGTALASIIGFVELTKAGTMLNNVTFQPFKV 186 >gi|260770437|ref|ZP_05879370.1| ABC polar amino acid transporter inner membrane protein [Vibrio furnissii CIP 102972] gi|260615775|gb|EEX40961.1| ABC polar amino acid transporter inner membrane protein [Vibrio furnissii CIP 102972] gi|315181508|gb|ADT88421.1| ABC polar amino acid transporter inner membrane protein [Vibrio furnissii NCTC 11218] Length = 216 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 43/160 (26%), Positives = 81/160 (50%), Gaps = 5/160 (3%) Query: 237 LIALKYQLHFDKPVLGQF--NFIGGSTVSPE---FMSLYIALSCYTAAFIAEIVRSGLIA 291 +I L +L P+L Q F G S V E + + ++L+ +++AF +I R + + Sbjct: 52 VIKLYVELFQGTPLLMQLFLAFFGLSLVGVEVSAWTAAVLSLTLFSSAFFHDIWRGCIES 111 Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 +P+GQ EA LGL++ + R ++ PQA R I P + ++K ++LA +GF +L Sbjct: 112 LPKGQWEACRTLGLSYLQTMRYIIAPQAARLAIAPTVGFSVQIVKGTALASIIGFVELTK 171 Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 G + N T Q ++ + +Y ++ ++ L + Sbjct: 172 AGTMLNNATFQPFKVFALVALLYFAICFPLSALARYLETR 211 >gi|188534745|ref|YP_001908542.1| Putative amino acid ABC transporter, permease protein [Erwinia tasmaniensis Et1/99] gi|188029787|emb|CAO97666.1| Putative amino acid ABC transporter, permease protein [Erwinia tasmaniensis Et1/99] Length = 221 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 37/102 (36%), Positives = 59/102 (57%) Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 A+ EI+R+G+ P+GQ EA LGLT R+ V+LP A++ I P L SQ + ++ Sbjct: 102 GAYSTEIIRAGIQVTPKGQWEAGRVLGLTRRQTFMRVVLPPALKRIYPALVSQCIIVMLG 161 Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379 SS+ V + +L I ++T + E+ L+ +YL+LSI Sbjct: 162 SSVVSQVSYEELTFAANLIQSRTFLSFEVYLVTTLMYLALSI 203 >gi|209543096|ref|YP_002275325.1| polar amino acid ABC transporter inner membrane subunit [Gluconacetobacter diazotrophicus PAl 5] gi|209530773|gb|ACI50710.1| polar amino acid ABC transporter, inner membrane subunit [Gluconacetobacter diazotrophicus PAl 5] Length = 219 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 41/123 (33%), Positives = 72/123 (58%), Gaps = 1/123 (0%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G VSP F S++I ++ AA++A+IV +GL VP +AA +LGLT R+A V+ P Sbjct: 83 GVMVSP-FASVFIGMALNAAAYLADIVTTGLGRVPPLYHDAAASLGLTRRQAYMRVIFPH 141 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378 A++++ P L + + ++ SS+A G DL + + T + +E++L+ +Y LS Sbjct: 142 ALQTMAPALANHFQIMILGSSMASIFGVEDLTGRAYDVGSTTFRILEVMLVAGVLYALLS 201 Query: 379 IMI 381 + + Sbjct: 202 VAL 204 >gi|295130174|ref|YP_003580837.1| hypothetical protein HMPREF0675_3666 [Propionibacterium acnes SK137] gi|291376703|gb|ADE00558.1| conserved hypothetical protein [Propionibacterium acnes SK137] Length = 182 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 45/127 (35%), Positives = 66/127 (51%), Gaps = 1/127 (0%) Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312 QF + V + I L A++AEI SGL +V GQ EAA ALG+ R Sbjct: 7 QFASVETEKVVTALAAAIIGLGLNEGAYLAEITGSGLESVDVGQTEAAKALGMKPSLIVR 66 Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA-DLVSVGGTIINQTGQAIEIILIWM 371 ++PQAMR IIPP ++ + +LK +SL +A+ F DL I N T I ++++ Sbjct: 67 RAIIPQAMRVIIPPPGNETIGMLKTTSLVLALPFTLDLQYATSAIANCTYAPIPLLVVAA 126 Query: 372 FIYLSLS 378 YL ++ Sbjct: 127 CWYLVMT 133 >gi|229829990|ref|ZP_04456059.1| hypothetical protein GCWU000342_02096 [Shuttleworthia satelles DSM 14600] gi|229791288|gb|EEP27402.1| hypothetical protein GCWU000342_02096 [Shuttleworthia satelles DSM 14600] Length = 216 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 33/105 (31%), Positives = 63/105 (60%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IA + AA+ AEI RSG+ ++P GQ EAA LG + + ++LPQ ++ I+P +T++ Sbjct: 92 IAFALNYAAYFAEIYRSGIESMPAGQYEAARVLGYSGSQTFFKIILPQVIKRILPSVTNE 151 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375 + L+K++SLA ++ +A++ + + + +I +F Y+ Sbjct: 152 VITLVKDTSLAFSIAYAEMFTQAKALAASAHNVLPLIAAGIFYYV 196 >gi|229593009|ref|YP_002875128.1| putative amino acid ABC transporter membrane protein [Pseudomonas fluorescens SBW25] gi|229364875|emb|CAY52939.1| putative amino acid BAC transport system, membrane protein [Pseudomonas fluorescens SBW25] Length = 239 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 44/127 (34%), Positives = 71/127 (55%), Gaps = 8/127 (6%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F++ IA S AAF +EI S L +P+GQ+EAA LGL+ R V+LPQ R +P Sbjct: 104 FVAAMIAFSLVFAAFSSEIWLSALKTLPKGQLEAAAMLGLSKGTTFRRVVLPQLTRIALP 163 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 L++ +L+LLK++SL + DL + QT A+ + M Y +++ + LF Sbjct: 164 GLSNNWLSLLKDTSLVSTISLVDL-------MRQTSLAVSVTKEPMLFY-TVACLGYLFF 215 Query: 386 NRLNAKI 392 + L+ ++ Sbjct: 216 SALSGRV 222 >gi|227514192|ref|ZP_03944241.1| glutamate ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus fermentum ATCC 14931] gi|227087455|gb|EEI22767.1| glutamate ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus fermentum ATCC 14931] Length = 484 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 47/177 (26%), Positives = 88/177 (49%), Gaps = 23/177 (12%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 + +P++ ++ F+ G+P+++ G + P F + + L Sbjct: 331 RGMPMIVLAFFIYIGMPSVI----------------------GHKI-PLFTAGILTLMLD 367 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 A++ IV+ G AV RGQ EAA +LGL + K V++PQ ++ ++P L +Q + LK Sbjct: 368 EGAYVGAIVKGGFQAVDRGQWEAARSLGLPYYKTLVKVIMPQGIKIMVPSLVNQLIITLK 427 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393 ++S+ A+G +L G II + + +I LI IY+ + ++ N + K+A Sbjct: 428 DTSILSAIGVMELTQTGTVIIARNMEGFKIWLIIGVIYIIIITLLTWLSNYVQRKMA 484 >gi|330902473|gb|EGH33506.1| amino acid ABC transporter permease [Pseudomonas syringae pv. japonica str. M301072PT] Length = 192 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 39/103 (37%), Positives = 57/103 (55%), Gaps = 3/103 (2%) Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 +A+ AEI+RS LI V +GQ +A AL A R ++LPQA+ +IPP+ +Q + LLK Sbjct: 70 SAYGAEIIRSALINVSQGQRDAVRALDFGPISAFRRIILPQALPFMIPPMGNQLVELLKT 129 Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380 +SL + DL G +I GQ LIW + + +M Sbjct: 130 TSLVSLITLTDLTFTGSQLITTLGQQ---TLIWSIVLVCYFVM 169 >gi|328885477|emb|CCA58716.1| putative glutamate transport protein [Streptomyces venezuelae ATCC 10712] Length = 224 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 42/127 (33%), Positives = 68/127 (53%), Gaps = 1/127 (0%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + L YT F+ E +RSG+ VP GQ EAA ALGL + LV+LPQA R+ + PL + Sbjct: 98 LGLIAYTGTFVCEALRSGINTVPPGQAEAARALGLNFVQVLTLVVLPQAFRAAVAPLANV 157 Query: 331 YLNLLKNSSL-AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 + L KN+++ A V + I N+T + ++ F ++ L++ LF+ Sbjct: 158 LIALTKNTTVAAAIGAAEAAVLMKEMIENETDALFAVFAVFAFGFIVLTLPTGLFLGWAA 217 Query: 390 AKIALKE 396 ++A+K Sbjct: 218 KRLAVKR 224 >gi|307331404|ref|ZP_07610523.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC [Streptomyces violaceusniger Tu 4113] gi|306882963|gb|EFN14030.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC [Streptomyces violaceusniger Tu 4113] Length = 249 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 42/121 (34%), Positives = 64/121 (52%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +AL A+ +EIVR + +V Q EAAIAL T + R V+LPQA+ +IPP + Sbjct: 89 LALGLTYGAYGSEIVRGAIASVAPAQREAAIALSFTPAQRMRRVILPQAIPEMIPPFNNL 148 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 + LLK ++L AV AD+ TG ++EI I + +Y L+ ++ M L Sbjct: 149 LIELLKATALVSAVSVADITFAAQLSRLATGDSLEIYAIILVLYFVLAFVLTRLMRLLER 208 Query: 391 K 391 + Sbjct: 209 R 209 >gi|239835031|ref|ZP_04683359.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium LMG 3301] gi|239823094|gb|EEQ94663.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium LMG 3301] Length = 220 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 55/162 (33%), Positives = 84/162 (51%), Gaps = 11/162 (6%) Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287 +I G+P LV QL + VL +F I S + + L IA S Y A E R+ Sbjct: 61 VIRGIPILV------QLFYIYFVLPEFG-IALSALQAGIIGLGIAYSAYQA----ENFRA 109 Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347 G+ A+ GQ EAA ++G+ R V+LPQA+R I+PP + + LLK+SS A A+ A Sbjct: 110 GIEAIDHGQTEAAQSIGMGWFMTMRRVILPQAVRVILPPYGNIMVMLLKDSSQASAITVA 169 Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 +L G + T + + + + YL LS+ + + + RL Sbjct: 170 ELTLQGQLLAASTFKNMSVYTLVAMFYLCLSLPLMMAVGRLE 211 >gi|257056920|ref|YP_003134752.1| amino acid ABC transporter membrane protein [Saccharomonospora viridis DSM 43017] gi|256586792|gb|ACU97925.1| amino acid ABC transporter membrane protein [Saccharomonospora viridis DSM 43017] Length = 223 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 35/93 (37%), Positives = 56/93 (60%), Gaps = 1/93 (1%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G T+SP + I L + A + AE+ R+G+ AVP+GQ EAA AL L + V+LPQ Sbjct: 84 GITLSPMVTGV-IGLGLHYATYTAEVYRAGIEAVPKGQWEAATALSLPRTRTWTAVILPQ 142 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 A+ ++P L + +++ K + L +A+G D+V Sbjct: 143 AITRVLPALGNYTISMFKETPLLLAIGVLDIVG 175 >gi|291457471|ref|ZP_06596861.1| glutamate transport system permease protein GluC [Bifidobacterium breve DSM 20213] gi|291381306|gb|EFE88824.1| glutamate transport system permease protein GluC [Bifidobacterium breve DSM 20213] Length = 225 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 50/154 (32%), Positives = 72/154 (46%), Gaps = 25/154 (16%) Query: 191 VFSFVLGIVLSLF------ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244 +FS +LG++L + + R + + K LPL I F++ G Sbjct: 29 LFSMILGVILVVMRISPISSLRTVAGAYVELFKNLPLTIIMVFMVLG------------- 75 Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYI-ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 Q T + F L + LS YTAAF+ E +RSG+ VP GQ EAA AL Sbjct: 76 -----AYAQLKLSFSDTFATNFFWLAVTGLSLYTAAFVCESLRSGINTVPLGQAEAARAL 130 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 GL ++ ++LPQA R + PL + + LLKN Sbjct: 131 GLGFMQSATEIILPQAFRGSVAPLGNTLIALLKN 164 >gi|157146481|ref|YP_001453800.1| arginine transporter permease subunit ArtQ [Citrobacter koseri ATCC BAA-895] gi|157083686|gb|ABV13364.1| hypothetical protein CKO_02241 [Citrobacter koseri ATCC BAA-895] Length = 238 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 64/222 (28%), Positives = 111/222 (50%), Gaps = 18/222 (8%) Query: 191 VFSFVLGIVLSL-FATRLSRHFH--EKTGKA-------LPLLYISTFLIFGLPTLVLI-- 238 V + ++G+VL++ FA S + TG A LP + + F+ FG L+L+ Sbjct: 19 VCALIIGLVLAMIFAVWESVKWRPIAWTGSAVVTILRGLPEILVVLFIYFGSSQLLLMLS 78 Query: 239 -ALKYQLHFDK-PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296 L F + P+ Q I VSP F+ IALS AA+ ++ +R L AVP GQ Sbjct: 79 DGFTINLGFVQIPLQMQ---IEDFDVSP-FLCGVIALSLLYAAYASQTLRGALKAVPSGQ 134 Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356 E+ ALGL+ +++PQ R +P L +Q+L LLK+++L + DL+ +I Sbjct: 135 WESGQALGLSKTAIFFRLVMPQMWRHALPGLGNQWLVLLKDTALVSLISVNDLMLQTKSI 194 Query: 357 INQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 +T + ++ IYL ++++ + R++ + E++ Sbjct: 195 ATRTQEPFTWYIVAAAIYLVITLVSQYILKRIDLRATRFERR 236 >gi|134291670|ref|YP_001115439.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia vietnamiensis G4] gi|134134859|gb|ABO59184.1| amino acid ABC transporter membrane protein 2, PAAT family [Burkholderia vietnamiensis G4] Length = 216 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 37/128 (28%), Positives = 69/128 (53%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P +++ L+ +T+A++AEI R + AVP+GQ EA+ +L +++ + R V+LPQA R Sbjct: 84 PPWVAATAGLTFFTSAYLAEIWRGCVEAVPKGQWEASASLAMSYVEQLRHVILPQAARIA 143 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 + P + +K+++L +GF +L G I N T + + + IY +L + Sbjct: 144 VAPTVGFGVQAVKDTALVSIIGFTELTKAGIAISNATFRPFVVYGLVALIYFALCYPLTR 203 Query: 384 FMNRLNAK 391 + L + Sbjct: 204 YARTLQRR 211 >gi|307246527|ref|ZP_07528599.1| Amino acid ABC transporter, permease protein [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306852590|gb|EFM84823.1| Amino acid ABC transporter, permease protein [Actinobacillus pleuropneumoniae serovar 1 str. 4074] Length = 238 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 48/173 (27%), Positives = 92/173 (53%), Gaps = 19/173 (10%) Query: 193 SFVLGIVLS-----LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247 SF++G+ ++ + T ++ H + A+ +YIS +I G P LV I++ + + Sbjct: 42 SFIIGMAIAVGVALIRVTPVNGMLH-RIALAIVKVYIS--IIRGTPMLVQISVVF---YG 95 Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307 P +G + + P + I S A+ +E VR+ + +VP+GQ EA + +T+ Sbjct: 96 LPAIGVY-------IDP-IPAAIIGFSLNIGAYGSETVRAAISSVPKGQWEAGYTICMTY 147 Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 + R ++ PQA+R +IPPL++ ++ L K++SLA V ++ V + N + Sbjct: 148 MQTFRRIIAPQAIRVVIPPLSNTFIGLFKDTSLASVVTVTEMFRVAQQMANMS 200 >gi|124486253|ref|YP_001030869.1| hypothetical protein Mlab_1437 [Methanocorpusculum labreanum Z] gi|124363794|gb|ABN07602.1| polar amino acid ABC transporter, inner membrane subunit [Methanocorpusculum labreanum Z] Length = 228 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 41/135 (30%), Positives = 75/135 (55%), Gaps = 7/135 (5%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P F L +AA+ ++I R + ++ GQM AA +LG+T +A R ++LPQ++R Sbjct: 87 PVFGVAVTVLGLRSAAYQSQIFRGAIQSLSEGQMLAARSLGMTKWQAIRSIILPQSLRLS 146 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 +P +++Y LL +S++A +G A+L++ +I++TG+ M +YL+ +++ L Sbjct: 147 LPGWSNEYPVLLTDSAVAYVIGVAELLTRTSQVISRTGEP-------MLLYLTCAVIFIL 199 Query: 384 FMNRLNAKIALKEKK 398 I EKK Sbjct: 200 LNYGGMMIIQYIEKK 214 >gi|315612722|ref|ZP_07887633.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis ATCC 49296] gi|315314832|gb|EFU62873.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis ATCC 49296] Length = 219 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 29/73 (39%), Positives = 51/73 (69%) Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 A + +T+A +AEI+R GL AV +GQ EA ++ G T + ++LPQA+R ++P + SQ+ Sbjct: 90 AFTLFTSAALAEIIRGGLNAVDKGQYEAGMSQGFTSTQILYYIILPQAIRKMLPAIISQF 149 Query: 332 LNLLKNSSLAVAV 344 + ++K++SL +V Sbjct: 150 VTVIKDTSLLYSV 162 Score = 37.4 bits (85), Expect = 4.7, Method: Compositional matrix adjust. Identities = 19/61 (31%), Positives = 36/61 (59%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 I GF T +++ ++ +T+IGT++ R N ++ I +Y+E RN+P L+ IF + Sbjct: 16 IFKGFGLTLYISLIAIVLSTLIGTVLAVMRNGKNPVLRIISSIYIEFVRNVPNLLWIFTI 75 Query: 149 Y 149 + Sbjct: 76 F 76 >gi|312142892|ref|YP_003994338.1| polar amino acid ABC transporter, inner membrane subunit [Halanaerobium sp. 'sapolanicus'] gi|311903543|gb|ADQ13984.1| polar amino acid ABC transporter, inner membrane subunit [Halanaerobium sp. 'sapolanicus'] Length = 229 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 39/135 (28%), Positives = 75/135 (55%), Gaps = 7/135 (5%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P F + + + ++A+ ++I R + +V Q++AA++LG+ A ++ PQA+R Sbjct: 86 PVFRAAVLGIGLRSSAYQSQIYRGAIQSVSGSQLKAAMSLGMNKLTAFSHIIAPQAIRIA 145 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 IPP+T++ +LK++SLA +G +LV G I + + M IYL+++ + + Sbjct: 146 IPPVTNESAIVLKDTSLAFTIGVVELVRQGDYFIATSNEP-------MVIYLTVAAIYFI 198 Query: 384 FMNRLNAKIALKEKK 398 +N ++L EKK Sbjct: 199 LTTTINLALSLFEKK 213 >gi|119946457|ref|YP_944137.1| ABC polar amino acid transporter inner membrane protein [Psychromonas ingrahamii 37] gi|119865061|gb|ABM04538.1| ABC polar amino acid transporter inner membrane protein [Psychromonas ingrahamii 37] Length = 246 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 40/138 (28%), Positives = 66/138 (47%), Gaps = 10/138 (7%) Query: 270 YIALSCYTA----------AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319 YI +S Y A A++AE R +AV +GQ+EAA A G+ K V+ PQ Sbjct: 109 YINISPYIAGIITIGFIFGAYMAETFRGAFLAVEKGQLEAATAYGMNKYKLFLRVMFPQM 168 Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379 MR +P + + +L LLK ++L +G D+V + G T Q + ++L + Sbjct: 169 MRHALPGIGNNWLVLLKTTALVSVIGLQDMVKIAGDAGGSTQQPFTFYIAIALVFLFFTS 228 Query: 380 MIALFMNRLNAKIALKEK 397 + +L + K +K + Sbjct: 229 VSSLLFSWAERKYTIKTR 246 >gi|91781327|ref|YP_556534.1| polar amino acid ABC transporter inner membrane protein [Burkholderia xenovorans LB400] gi|91693987|gb|ABE37184.1| amino acid ABC transporter membrane protein 1, PAAT family [Burkholderia xenovorans LB400] Length = 227 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 50/170 (29%), Positives = 89/170 (52%), Gaps = 13/170 (7%) Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281 LYIS + G P LV + + L F P++G +GG ++ + L + A+ Sbjct: 56 LYIS--FMRGTPALVQL---FMLFFTLPLIG----LGGR----PMLAAALTLGLNSGAYT 102 Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341 AEI+R L V GQ +AAIALG++ + + LPQ +++ +P L +++ LLK + LA Sbjct: 103 AEILRGNLRVVTTGQYDAAIALGMSPSRIALRIALPQMLKASLPALINEFTILLKTTPLA 162 Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 V +L G +I +T + +++L+ YL++++ + R+ K Sbjct: 163 SVVAVTELTYAGQIVIARTYTSTQVMLLVSVGYLAVALPVIYAARRMQRK 212 >gi|227546750|ref|ZP_03976799.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Bifidobacterium longum subsp. infantis ATCC 55813] gi|227212712|gb|EEI80593.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Bifidobacterium longum subsp. infantis ATCC 55813] Length = 225 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 65/215 (30%), Positives = 97/215 (45%), Gaps = 27/215 (12%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPTLVLIALKYQL 244 +FS +LG++L + G K LPL I F++ G Sbjct: 29 LFSLILGVILVVMRISPISSLRAVAGAYVELFKNLPLTIIMVFMVLG------------- 75 Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYI-ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 Q T + F L + LS YTAAF+ E +RSG+ VP GQ EAA AL Sbjct: 76 -----AYAQLKLSFSDTFTTNFFWLAVTGLSLYTAAFVCESLRSGINTVPIGQAEAARAL 130 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN-SSLAVAVGFADLVSVGGTIIN-QTG 361 GL ++ ++LPQA R + PL + + LLKN + A A + S+ +I + Sbjct: 131 GLGFMQSATEIILPQAFRGSVAPLGNTLIALLKNSTVAAAASVATETSSLMSEMIEFRPD 190 Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 I+I LI+ Y+ L I I + L+ K+A++ Sbjct: 191 VIIQIFLIFALGYVILIIPIGMLTTYLSNKLAVRR 225 >gi|218283496|ref|ZP_03489486.1| hypothetical protein EUBIFOR_02076 [Eubacterium biforme DSM 3989] gi|218215764|gb|EEC89302.1| hypothetical protein EUBIFOR_02076 [Eubacterium biforme DSM 3989] Length = 218 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 40/128 (31%), Positives = 68/128 (53%), Gaps = 7/128 (5%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I S T A+ AE +R + +VP+GQMEA +G+++ + ++LPQA RS P L + Sbjct: 90 IVFSLNTGAYCAETIRGSIESVPQGQMEAGYCVGMSYMQIMMHIILPQAFRSAFPSLFNN 149 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++L+K++SLA + ++ I +T Q +++ + F+YL +F L Sbjct: 150 LISLVKDTSLAANITVTEMFMQTERIAGRTYQFMQLYIEVAFVYL-------IFCTVLTW 202 Query: 391 KIALKEKK 398 A EKK Sbjct: 203 LQAWGEKK 210 >gi|171743315|ref|ZP_02919122.1| hypothetical protein BIFDEN_02446 [Bifidobacterium dentium ATCC 27678] gi|283455712|ref|YP_003360276.1| glutamate transport system permease gluD [Bifidobacterium dentium Bd1] gi|171278929|gb|EDT46590.1| hypothetical protein BIFDEN_02446 [Bifidobacterium dentium ATCC 27678] gi|283102346|gb|ADB09452.1| Glutamate transport system permease protein GluD [Bifidobacterium dentium Bd1] Length = 377 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 31/89 (34%), Positives = 59/89 (66%) Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322 SP + ++ +AL Y + +AE+VRSG+ +P GQ EA++ALGLT ++ + +PQA+ + Sbjct: 141 SPAYWAVVLALVIYNGSVVAELVRSGVGNLPNGQREASLALGLTRTQSLMQIEVPQAIYA 200 Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 ++P +Q + +LK+++L + + DL+ Sbjct: 201 MLPAAVTQLVVVLKDTALGSIIMYTDLLQ 229 >gi|153815715|ref|ZP_01968383.1| hypothetical protein RUMTOR_01953 [Ruminococcus torques ATCC 27756] gi|317501901|ref|ZP_07960085.1| amino acid ABC transporter [Lachnospiraceae bacterium 8_1_57FAA] gi|331088284|ref|ZP_08337203.1| hypothetical protein HMPREF1025_00786 [Lachnospiraceae bacterium 3_1_46FAA] gi|145846956|gb|EDK23874.1| hypothetical protein RUMTOR_01953 [Ruminococcus torques ATCC 27756] gi|316896581|gb|EFV18668.1| amino acid ABC transporter [Lachnospiraceae bacterium 8_1_57FAA] gi|330408528|gb|EGG87994.1| hypothetical protein HMPREF1025_00786 [Lachnospiraceae bacterium 3_1_46FAA] Length = 236 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 30/73 (41%), Positives = 53/73 (72%) Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 + A+I+EI+RSG+ +V GQMEA A+GL+ + +++PQA+++I+P L ++++ L+K Sbjct: 114 SGAYISEIMRSGIQSVDAGQMEAGRAVGLSFGASMMKIVIPQAVKNILPTLGNEFIALIK 173 Query: 337 NSSLAVAVGFADL 349 +S+ VG ADL Sbjct: 174 ETSVVSFVGAADL 186 Score = 37.0 bits (84), Expect = 6.1, Method: Compositional matrix adjust. Identities = 23/91 (25%), Positives = 46/91 (50%), Gaps = 6/91 (6%) Query: 71 EIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN-----KLV 125 ++D+ I + + Y ++ G NT +A G++ +IGT++ R+ +++ Sbjct: 7 KVDKFIEIFIDQNGY-VKVVQGLQNTVLIAIVGLVIGILIGTVIATARVLPKYKVLPRVL 65 Query: 126 AWICRVYVEVFRNIPPLVVIFFLYKSVLSVL 156 IC VYV +FR P +V + Y +L ++ Sbjct: 66 NGICSVYVAMFRGTPMVVQLLVFYYVLLPII 96 >gi|315635186|ref|ZP_07890464.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Aggregatibacter segnis ATCC 33393] gi|315476148|gb|EFU66902.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Aggregatibacter segnis ATCC 33393] Length = 240 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 56/220 (25%), Positives = 110/220 (50%), Gaps = 27/220 (12%) Query: 183 MDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL------YISTFLIFGLPTLV 236 +D + V SF G+ ++L + EK + LL Y+ST I G P LV Sbjct: 34 IDKTIPLAVISFFAGVAIALIVALI--RIVEKPNLGMRLLQILCRIYVST--IRGTPMLV 89 Query: 237 LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296 I + + + P +G + P F + IA S A+ +E +R+ ++++P+GQ Sbjct: 90 QI---FIIFYGLPEVG-------IKLDP-FPTAIIAFSINIGAYASETIRAAILSIPKGQ 138 Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356 EA+ ++G+ + + ++ QA+R +PPL + +++ +K++SLA V ++ V I Sbjct: 139 WEASYSIGMNYYQTFTRTIMTQALRVSVPPLANTFISNVKDTSLASLVLVTEMFRVAQNI 198 Query: 357 INQTGQAIEIILIW---MFIYLSLSIMIALFMNRLNAKIA 393 T + E I+I+ IY + ++++ +RL +++ Sbjct: 199 ---TAENYEFIMIYSEAALIYWCICLILSFAQDRLEQRLS 235 >gi|307703835|ref|ZP_07640776.1| binding-protein-dependent transport system inner membrane component family protein [Streptococcus oralis ATCC 35037] gi|307622670|gb|EFO01666.1| binding-protein-dependent transport system inner membrane component family protein [Streptococcus oralis ATCC 35037] Length = 213 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 61/217 (28%), Positives = 107/217 (49%), Gaps = 29/217 (13%) Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF---GLPTLV 236 ++T+ A + +FS LGIV++ FA ++ PL Y+ I+ G P L+ Sbjct: 16 SMTLQVFALVLIFSIPLGIVVA-FALQVRWE---------PLHYLIDLYIWVMRGTPLLL 65 Query: 237 -LIALKYQLHFDKPVLG-QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294 LI + Y L P +G + + + + IA AA+ AEI R G+ +P+ Sbjct: 66 QLIFIYYVL----PSIGIRLDRLPAAV---------IAFVLNYAAYFAEIFRGGIETIPK 112 Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354 GQ EAA L + R ++LPQ + ++P + ++ ++L+K++SL A+G +DL+ Sbjct: 113 GQYEAAKVLKFSPFDTVRYIILPQVTKIVLPSVFNEIMSLVKDTSLVYALGISDLILASR 172 Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 T N+ + + L IYL + ++ + RL K Sbjct: 173 TAANRDASLVPMFLAGA-IYLIMIGLVTIVAKRLEKK 208 >gi|291455132|ref|ZP_06594522.1| glutamate transporter permease [Streptomyces albus J1074] gi|291358081|gb|EFE84983.1| glutamate transporter permease [Streptomyces albus J1074] Length = 412 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 56/212 (26%), Positives = 101/212 (47%), Gaps = 42/212 (19%) Query: 188 KIFVFSFVLGIVLS--LFATRLSRHFHEKTGKALPLLYISTFLI---FGLPTLVLI---- 238 K F ++ VL +VL L RLS H P+ +++T ++ +P LV+I Sbjct: 200 KAFAYASVLSLVLGGVLAVGRLSDH--------RPVRWVATVIVEFFRAMPVLVMIFFVF 251 Query: 239 -ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQM 297 AL+ Q +L L+ Y + +AE+ RSG+ +V +GQ Sbjct: 252 VALQVQ---------------------ALPALVTGLTLYNGSVLAEVFRSGVNSVDKGQR 290 Query: 298 EAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII 357 EAA ALG+ + VL PQA+R+++P + SQ + LK++SL + + + + G I Sbjct: 291 EAAYALGMRKTQVMVQVLAPQALRAMLPAIISQLVVALKDTSLGYLITYEEFLHAGKLIA 350 Query: 358 NQTGQA---IEIILIWMFIYLSLSIMIALFMN 386 + I ++++ IY+ + ++++ F Sbjct: 351 SNLDYDLPFIPVVMVISPIYIGMCMLLSWFAQ 382 Score = 42.0 bits (97), Expect = 0.17, Method: Compositional matrix adjust. Identities = 22/61 (36%), Positives = 36/61 (59%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G NT + + ++G ++ GRLS ++ V W+ V VE FR +P LV+IFF+ Sbjct: 191 LLRGLGNTLKAFAYASVLSLVLGGVLAVGRLSDHRPVRWVATVIVEFFRAMPVLVMIFFV 250 Query: 149 Y 149 + Sbjct: 251 F 251 >gi|225374846|ref|ZP_03752067.1| hypothetical protein ROSEINA2194_00469 [Roseburia inulinivorans DSM 16841] gi|225213307|gb|EEG95661.1| hypothetical protein ROSEINA2194_00469 [Roseburia inulinivorans DSM 16841] Length = 216 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 36/123 (29%), Positives = 68/123 (55%), Gaps = 1/123 (0%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IA + AA+ AEI R G+ ++P GQ EAA LG + ++LPQ ++ I+P +T++ Sbjct: 92 IAFAINYAAYFAEIYRGGIESMPVGQYEAAKVLGYGKTQTFVKIILPQVIKRILPSVTNE 151 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 + L+K++SLA ++ +A++ S + I + +F Y+ + ++A M Sbjct: 152 VITLVKDTSLAFSIAYAEMFSQAKALAASQKSMIPFVAAAIFYYV-FNYVVAFIMEFFEK 210 Query: 391 KIA 393 K++ Sbjct: 211 KMS 213 >gi|186472703|ref|YP_001860045.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD [Burkholderia phymatum STM815] gi|184195035|gb|ACC72999.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD [Burkholderia phymatum STM815] Length = 219 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 38/124 (30%), Positives = 70/124 (56%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I ++ + A + +E+ R+GL V RGQ EAA AL L+ + V+LPQA+R +IP L + Sbjct: 95 IGIALHYACYTSEVYRAGLNGVARGQWEAACALSLSPWRTYSGVILPQAVRPVIPALGNY 154 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 + + K++ + A+ +L+ + ++T + +E I + +L +SI A + RL Sbjct: 155 LVAMFKDTPVLSAITVVELMQQAKNVGSETFRYLEPITLAGLFFLVISITFAQLVRRLEF 214 Query: 391 KIAL 394 ++ L Sbjct: 215 RLRL 218 >gi|299782729|gb|ADJ40727.1| Glutamate ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus fermentum CECT 5716] Length = 484 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 47/177 (26%), Positives = 88/177 (49%), Gaps = 23/177 (12%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 + +P++ ++ F+ G+P+++ G + P F + + L Sbjct: 331 RGMPMIVLAFFIYIGMPSVI----------------------GHKI-PLFTAGILTLMLD 367 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 A++ IV+ G AV RGQ EAA +LGL + K V++PQ ++ ++P L +Q + LK Sbjct: 368 EGAYVGAIVKGGFQAVDRGQWEAARSLGLPYYKTLVKVIMPQGIKIMVPSLVNQLIITLK 427 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393 ++S+ A+G +L G II + + +I LI IY+ + ++ N + K+A Sbjct: 428 DTSILSAIGVMELTQTGTVIIARNMEGFKIWLIIGVIYIIIITLLTWLSNYVQRKMA 484 >gi|295836793|ref|ZP_06823726.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces sp. SPB74] gi|197697533|gb|EDY44466.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces sp. SPB74] Length = 213 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 39/134 (29%), Positives = 73/134 (54%), Gaps = 1/134 (0%) Query: 260 STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319 STV P + + + L + + +++E R+G+ AVP+GQ EAA AL L+ + R V+LPQA Sbjct: 80 STVDPLTIGI-VVLGVHYSTYMSEAYRAGIDAVPKGQWEAARALSLSPGRTWRAVILPQA 138 Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379 +R+++P L + + + K + L A+ ++V ++ E+ + I+L S Sbjct: 139 VRNVLPALGNYAIAMFKETPLLAAITVGEMVYEAREYASEHFVYAEVFTLAGLIFLVASY 198 Query: 380 MIALFMNRLNAKIA 393 +L M +L ++ Sbjct: 199 PTSLLMRKLENRLG 212 >gi|169837461|ref|ZP_02870649.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [candidate division TM7 single-cell isolate TM7a] Length = 417 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 34/132 (25%), Positives = 77/132 (58%), Gaps = 1/132 (0%) Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320 +SP +L+I +S T A+++EI+R G+ ++ GQ EAA A+G+T+ + + ++ PQ Sbjct: 270 NLSPLIAALFI-VSINTGAYMSEIIRGGIDSIDTGQFEAAKAIGMTNFQLMKSIIFPQMF 328 Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380 R+I+P + ++ + +K++S+ + +L + ++ + E+ +I IY L+ Sbjct: 329 RNILPMIGNELIVNIKDTSVLNVISVTELFFISNSVAGTYSRYYEVFIITSVIYFFLTFT 388 Query: 381 IALFMNRLNAKI 392 ++L + ++ +I Sbjct: 389 LSLILKQIEKRI 400 >gi|145295857|ref|YP_001138678.1| hypothetical protein cgR_1782 [Corynebacterium glutamicum R] gi|140845777|dbj|BAF54776.1| hypothetical protein [Corynebacterium glutamicum R] Length = 228 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 42/123 (34%), Positives = 73/123 (59%), Gaps = 3/123 (2%) Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335 YT+ F+AE +RSG+ V GQ EAA +LGL R ++ PQA+R+ I PL + + L Sbjct: 107 YTSTFVAESLRSGINTVHFGQAEAARSLGLGFGATFRSIIFPQAVRAAIVPLGNTLIALT 166 Query: 336 KNSSLA--VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393 KN+++A + VG A L+ + TI N + I+ ++ L++ + L + +L+ ++A Sbjct: 167 KNTTIASVIGVGEASLL-MKATIENHANMLFVVFAIFAVGFMILTLPMGLGLGKLSERLA 225 Query: 394 LKE 396 +K+ Sbjct: 226 VKK 228 >gi|296454519|ref|YP_003661662.1| polar amino acid ABC transporter inner membrane subunit [Bifidobacterium longum subsp. longum JDM301] gi|296183950|gb|ADH00832.1| polar amino acid ABC transporter, inner membrane subunit [Bifidobacterium longum subsp. longum JDM301] Length = 220 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 48/149 (32%), Positives = 74/149 (49%), Gaps = 14/149 (9%) Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252 SF LG++L++ L R + YI F G P LV + + + F P +G Sbjct: 31 SFALGLILAI-VVALVRVAKVPVASQIAWFYIWVFR--GTPLLVQL---FVIFFGLPSVG 84 Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312 P S IA S A+ AE +R ++AVP+GQ+EA +A + + R Sbjct: 85 --------ITIPALPSAVIAFSLNVGAYAAETLRGAILAVPKGQLEAGLAANMPYVTIMR 136 Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341 ++LPQA RS P L + ++ L+K++SLA Sbjct: 137 RIILPQAFRSAFPALFNSFIALVKDTSLA 165 >gi|258623969|ref|ZP_05718922.1| arginine ABC transporter, permease protein [Vibrio mimicus VM603] gi|258583763|gb|EEW08559.1| arginine ABC transporter, permease protein [Vibrio mimicus VM603] Length = 229 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 48/123 (39%), Positives = 72/123 (58%), Gaps = 4/123 (3%) Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287 +I GLP L+++ Y L +FI +SP F+S IALS A++ ++ +R Sbjct: 56 VIRGLPELLVVLFIYFGSTQVLFLITGDFI---EISP-FISGVIALSLIFASYASQTLRG 111 Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347 L AV RGQ EAA ALG+ A ++LPQA+R +P L +Q+L LLK+++L +G Sbjct: 112 ALKAVGRGQREAASALGIPPAHAFFRIVLPQAVRHALPGLMNQWLVLLKDTALVSLIGVT 171 Query: 348 DLV 350 DL+ Sbjct: 172 DLL 174 >gi|332040825|gb|EGI77197.1| polar amino acid ABC transporter, inner membrane subunit [Hylemonella gracilis ATCC 19624] Length = 226 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 42/109 (38%), Positives = 61/109 (55%), Gaps = 5/109 (4%) Query: 255 NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLV 314 +F G +SP F + AL+ +A+ AE+ R A+P+GQ+EAA +LGL + V Sbjct: 81 HFDGAIDLSP-FAAGVFALALVFSAYAAEVFRGSFAAIPKGQIEAAQSLGLRPAQTFFAV 139 Query: 315 LLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363 LPQA R +P L + + +LLK++SL VG DL+ N GQA Sbjct: 140 RLPQAWRIALPSLGNLWQSLLKDTSLVSVVGLEDLLKKA----NMAGQA 184 >gi|298379950|ref|ZP_06989555.1| arginine transporter permease subunit ArtQ [Escherichia coli FVEC1302] gi|298279648|gb|EFI21156.1| arginine transporter permease subunit ArtQ [Escherichia coli FVEC1302] Length = 226 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 55/186 (29%), Positives = 95/186 (51%), Gaps = 8/186 (4%) Query: 217 KALPLLYISTFLIFGLPTLVLI---ALKYQLHFDK-PVLGQFNFIGGSTVSPEFMSLYIA 272 + LP + + F+ FG L+L L F + PV Q + I VSP F+ IA Sbjct: 43 RGLPEILVVLFIYFGSSQLLLTLSDGFTINLGFVQIPV--QMD-IENFDVSP-FLCGVIA 98 Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 LS AA+ ++ +R L AVP GQ E+ ALGL+ +++PQ R +P L +Q+L Sbjct: 99 LSLLYAAYASQTLRGALKAVPMGQWESGQALGLSKSAIFFRLVMPQMWRHALPGLGNQWL 158 Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 LLK+++L + DL+ +I +T + ++ IYL ++++ + R++ + Sbjct: 159 VLLKDTALVSLISVNDLMLQTKSIATRTQEPFTWYIVAAAIYLVITLLSQYILKRIDLRA 218 Query: 393 ALKEKK 398 E++ Sbjct: 219 TRFERR 224 >gi|213691657|ref|YP_002322243.1| polar amino acid ABC transporter, inner membrane subunit [Bifidobacterium longum subsp. infantis ATCC 15697] gi|317481626|ref|ZP_07940661.1| His/Glu/Gln/Arg/opine family amino ABC transporter [Bifidobacterium sp. 12_1_47BFAA] gi|213523118|gb|ACJ51865.1| polar amino acid ABC transporter, inner membrane subunit [Bifidobacterium longum subsp. infantis ATCC 15697] gi|316916916|gb|EFV38303.1| His/Glu/Gln/Arg/opine family amino ABC transporter [Bifidobacterium sp. 12_1_47BFAA] gi|320457746|dbj|BAJ68367.1| putative amino acid ABC transporter permease component [Bifidobacterium longum subsp. infantis ATCC 15697] Length = 220 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 59/209 (28%), Positives = 96/209 (45%), Gaps = 27/209 (12%) Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252 SF LG++L++ L R + YI F G P LV + + + F P +G Sbjct: 31 SFALGLILAI-VVALVRVAKVPVASQIAWFYIWVFR--GTPLLVQL---FVIFFGLPSVG 84 Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312 P S IA S A+ AE +R ++AVP+GQ+EA +A + + R Sbjct: 85 --------ITIPALPSAVIAFSLNVGAYAAETLRGAILAVPKGQLEAGLAANMPYVTIMR 136 Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW-- 370 ++LPQA RS P L + ++ L+K++SLA + T++ A I+ I+ Sbjct: 137 RIILPQAFRSAFPALFNSFIALVKDTSLAANI----------TVVEMFMTAQRIVAIYYE 186 Query: 371 -MFIYLSLSIMIALFMNRLNAKIALKEKK 398 + +Y+ + ++ LF L EKK Sbjct: 187 PLVLYIEVGLIYLLFCTLLGWLQDYCEKK 215 >gi|260430643|ref|ZP_05784615.1| L-cystine transport system permease protein TcyL [Silicibacter lacuscaerulensis ITI-1157] gi|260418084|gb|EEX11342.1| L-cystine transport system permease protein TcyL [Silicibacter lacuscaerulensis ITI-1157] Length = 224 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 48/145 (33%), Positives = 77/145 (53%), Gaps = 12/145 (8%) Query: 208 SRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP-VLGQFNFIGGSTVSPEF 266 R F L LL+IS F G P LV + L Y + P V+ I G T + Sbjct: 44 ERVFRVPVLDQLVLLFISFFR--GTPLLVQLFLFY---YGLPQVMSFLTAIDGVTAA--- 95 Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326 + L+ + AA++AE +R+ +I V R Q EAA ++G+T + R V+LPQA R P Sbjct: 96 ---IMGLTLHFAAYMAETIRAAIIGVDRSQWEAAQSIGMTQGQMMRRVILPQAARVAAPT 152 Query: 327 LTSQYLNLLKNSSLAVAVGFADLVS 351 L + +++++K +SLA +G +++ Sbjct: 153 LVNYFIDMIKGTSLAFTLGVTEMMG 177 >gi|225387881|ref|ZP_03757645.1| hypothetical protein CLOSTASPAR_01651 [Clostridium asparagiforme DSM 15981] gi|225046008|gb|EEG56254.1| hypothetical protein CLOSTASPAR_01651 [Clostridium asparagiforme DSM 15981] Length = 263 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 36/120 (30%), Positives = 65/120 (54%) Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 LS T A++AE VR G++++ GQ E A ++G+TH + V+LPQA+R+I+P + + + Sbjct: 113 LSINTGAYMAETVRGGILSIDPGQTEGAKSIGMTHVQTMIYVILPQALRNIMPQIGNNLI 172 Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 +K+S + +G A+L+ E I M +Y ++ + + RL K+ Sbjct: 173 INIKDSCVLSVIGLAELLYKTKAAAGALYMNFETYTITMIMYFIMTFTCSRILRRLENKM 232 >gi|114769151|ref|ZP_01446777.1| putative amino acid ABC transporter permease protein [alpha proteobacterium HTCC2255] gi|114550068|gb|EAU52949.1| putative amino acid ABC transporter permease protein [alpha proteobacterium HTCC2255] Length = 222 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 59/198 (29%), Positives = 100/198 (50%), Gaps = 22/198 (11%) Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240 LT+ + + SF +G+ RLSRH+ +A+ +Y+ F G +V + Sbjct: 21 LTLASGVVALIISFTVGL------ARLSRHW---VVRAIATIYLEFFR--GTSAIVQM-- 67 Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300 + ++F P+LG F P M+ +A A+ +E+VR+ + +V R Q EAA Sbjct: 68 -FFMYFVLPLLGVF--------LPALMAGIVACGFNLGAYGSEVVRASVQSVGREQREAA 118 Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 AL T+ + R VL+PQA+ +IP + + LLK +++A + +DL + I QT Sbjct: 119 KALNYTNFQLYRHVLIPQAIPVMIPSFGNLVIELLKLTAVASLITISDLTFMSQIIRVQT 178 Query: 361 GQAIEIILIWMFIYLSLS 378 +E +++ M IY LS Sbjct: 179 ALTLEPLILIMVIYFILS 196 >gi|23336346|ref|ZP_00121567.1| COG0765: ABC-type amino acid transport system, permease component [Bifidobacterium longum DJO10A] gi|189438885|ref|YP_001953966.1| amino acid ABC transporter permease [Bifidobacterium longum DJO10A] gi|296454583|ref|YP_003661726.1| polar amino acid ABC transporter inner membrane subunit [Bifidobacterium longum subsp. longum JDM301] gi|317481690|ref|ZP_07940723.1| binding-protein-dependent transport system inner membrane component [Bifidobacterium sp. 12_1_47BFAA] gi|322691617|ref|YP_004221187.1| glutamate ABC transporter permease [Bifidobacterium longum subsp. longum JCM 1217] gi|189427320|gb|ACD97468.1| ABC-type amino acid transport system permease component [Bifidobacterium longum DJO10A] gi|291516217|emb|CBK69833.1| amino acid ABC transporter membrane protein 1, PAAT family (TC 3.A.1.3.-) [Bifidobacterium longum subsp. longum F8] gi|296184014|gb|ADH00896.1| polar amino acid ABC transporter, inner membrane subunit [Bifidobacterium longum subsp. longum JDM301] gi|316916869|gb|EFV38258.1| binding-protein-dependent transport system inner membrane component [Bifidobacterium sp. 12_1_47BFAA] gi|320456473|dbj|BAJ67095.1| glutamate ABC transporter permease component [Bifidobacterium longum subsp. longum JCM 1217] Length = 225 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 65/215 (30%), Positives = 97/215 (45%), Gaps = 27/215 (12%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPTLVLIALKYQL 244 +FS +LG++L + G K LPL I F++ G Sbjct: 29 LFSLILGVILVVMRISPISSLRAVAGAYVELFKNLPLTIIMVFMVLG------------- 75 Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYI-ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 Q T + F L + LS YTAAF+ E +RSG+ VP GQ EAA AL Sbjct: 76 -----AYAQLKLSFSDTFTTNFFWLAVTGLSLYTAAFVCESLRSGINTVPIGQAEAARAL 130 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN-SSLAVAVGFADLVSVGGTIIN-QTG 361 GL ++ ++LPQA R + PL + + LLKN + A A + S+ +I + Sbjct: 131 GLGFMQSATEIILPQAFRGSVAPLGNTLIALLKNSTVAAAASVATETSSLMSEMIEFRPD 190 Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 I+I LI+ Y+ L I I + L+ K+A++ Sbjct: 191 VIIQIFLIFALGYVILIIPIGMLTTYLSNKLAVRR 225 >gi|85705013|ref|ZP_01036113.1| polar amino acid uptake family ABC transporter, permease protein [Roseovarius sp. 217] gi|85670335|gb|EAQ25196.1| polar amino acid uptake family ABC transporter, permease protein [Roseovarius sp. 217] Length = 261 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 46/175 (26%), Positives = 88/175 (50%), Gaps = 6/175 (3%) Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY----IALSCYTAAFIAE 283 +I G P L+ I L Y + + Q+ +I GS + P + +AL+ A + E Sbjct: 88 IIRGTPLLLQIWLLY--YGLGSLFPQYPWIRGSELWPYLRQAWPYAVLALTLSYAGYEGE 145 Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343 ++R G +V +GQ+EAA A G+ R + LPQA+R+++P L + + LK + L Sbjct: 146 VMRGGFASVQKGQLEAARAFGMPRFTIFRRIWLPQAIRNVLPTLGGETILQLKATPLVAT 205 Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 + ++ SV + T E +L+ +Y+ ++ +IAL + ++ + ++ Sbjct: 206 ITVIEIYSVSNRVRADTFIVYEPLLLLALVYMIIAGLIALMFRWVENRVPTRRQQ 260 >gi|304405414|ref|ZP_07387073.1| polar amino acid ABC transporter, inner membrane subunit [Paenibacillus curdlanolyticus YK9] gi|304345453|gb|EFM11288.1| polar amino acid ABC transporter, inner membrane subunit [Paenibacillus curdlanolyticus YK9] Length = 305 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 36/108 (33%), Positives = 67/108 (62%) Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333 +T AFI+E +R+G+ AV RGQ EAA+A+G+T ++ ++LPQA+ +P + + + Sbjct: 105 GLHTGAFISETIRAGVGAVDRGQTEAALAIGMTGYQSFLRIVLPQAVAVSMPVVANLVIA 164 Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 LK++SLA ++G ++ T+ T IE+ + IY ++S+++ Sbjct: 165 NLKDTSLAFSLGVMEMTGKSQTLGQATQHFIEVYIALSAIYFAVSMVL 212 >gi|302023524|ref|ZP_07248735.1| amino acid ABC transporter permease protein [Streptococcus suis 05HAS68] Length = 174 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 31/91 (34%), Positives = 56/91 (61%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +A + AA+ +EI R G+ A+P+GQ EAA L T + R ++LPQ ++ ++P + ++ Sbjct: 50 LAFTLNYAAYFSEIFRGGIEAIPKGQYEAAKVLKFTPVQTIRYIVLPQVVKIVLPSVFNE 109 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361 + L+K++SL A+G +DL+ T N+ Sbjct: 110 VMTLVKDTSLVYALGVSDLLLASRTAANRDA 140 >gi|295693564|ref|YP_003602174.1| amino acid ABC transporter, permease protein [Lactobacillus crispatus ST1] gi|295031670|emb|CBL51149.1| Amino acid ABC transporter, permease protein [Lactobacillus crispatus ST1] Length = 215 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 37/128 (28%), Positives = 68/128 (53%), Gaps = 1/128 (0%) Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321 V P + + A AA+ AEI R G ++ GQ EAA L L + +++PQ ++ Sbjct: 82 VFPRYQAALFAFVLNYAAYFAEIFRGGFQSIDEGQFEAAKVLRLNRWQTMTKIIIPQVIK 141 Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 ++P + ++ +NL+K+SSL +G DL+ G + + + ++L+ + IYL L + Sbjct: 142 IVLPSIGNEVINLVKDSSLVYVIGLGDLLRAGNVAMARDVTLVPLVLVGV-IYLLLIGIC 200 Query: 382 ALFMNRLN 389 A + +L Sbjct: 201 AFVLKKLE 208 >gi|222480219|ref|YP_002566456.1| polar amino acid ABC transporter, inner membrane subunit [Halorubrum lacusprofundi ATCC 49239] gi|222453121|gb|ACM57386.1| polar amino acid ABC transporter, inner membrane subunit [Halorubrum lacusprofundi ATCC 49239] Length = 308 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 67/224 (29%), Positives = 107/224 (47%), Gaps = 20/224 (8%) Query: 179 PTLTMDT--NAKIFVFSFVLG--IVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234 P L+ T I S VLG I + L TR+ F L L Y T L+ G P Sbjct: 88 PALSRGTWLTVVITAMSLVLGFFIAVPLAVTRVYGRFS----AWLSLAY--TELLRGTPL 141 Query: 235 LV-LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT---AAFIAEIVRSGLI 290 L L L Y L+ V G + + V +++A+ +T AA+ AE +R L Sbjct: 142 LAQLFVLYYGLNLASYVPGSVSGVFARDV------VWVAILGFTLNGAAYQAEYIRGALE 195 Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 +V GQ+ A A+GL+ + V+LPQ +R IP T++++ L+K SSLA + +L Sbjct: 196 SVEEGQITAGRAIGLSKVETIYYVVLPQGLRYAIPSWTNEFVYLIKYSSLAAFITVPELY 255 Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394 I ++T + I ++ YL+L + + M R+ ++A+ Sbjct: 256 YRADQIASETFRYTLIFVVTGLTYLALVLTASKLMERVEERVAI 299 >gi|330833059|ref|YP_004401884.1| amino acid (glutamine) ABC transporter permease [Streptococcus suis ST3] gi|329307282|gb|AEB81698.1| amino acid (glutamine) ABC transporter, permease protein [Streptococcus suis ST3] Length = 213 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 31/91 (34%), Positives = 56/91 (61%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +A + AA+ +EI R G+ A+P+GQ EAA L T + R ++LPQ ++ ++P + ++ Sbjct: 89 LAFTLNYAAYFSEIFRGGIEAIPKGQYEAAKVLKFTPVQTIRYIVLPQVVKIVLPSVFNE 148 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361 + L+K++SL A+G +DL+ T N+ Sbjct: 149 VMTLVKDTSLVYALGVSDLLLASRTAANRDA 179 >gi|293380807|ref|ZP_06626848.1| ABC transporter, permease protein [Lactobacillus crispatus 214-1] gi|290922631|gb|EFD99592.1| ABC transporter, permease protein [Lactobacillus crispatus 214-1] Length = 216 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 52/180 (28%), Positives = 89/180 (49%), Gaps = 27/180 (15%) Query: 222 LYISTFLIFGLPTLVLIALKY-----QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 LY+ F I +PT+VL+ L Y LH + P +M++ +A S + Sbjct: 53 LYLEFFRI--VPTVVLLYLVYYILPRSLHVNWPA--------------TWMAV-LAFSMW 95 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 AA ++IVR L + P+ Q E+ +ALGL + R VLLPQA++ +P + ++K Sbjct: 96 VAAEFSDIVRGALESFPKTQRESGLALGLNRLQLFRYVLLPQAVKLELPATINLATRVIK 155 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF-----IYLSLSIMIALFMNRLNAK 391 +SL + + ++++VG II Q + W++ +Y L ++ + RL AK Sbjct: 156 TTSLLMIINIMEVINVGQQIIEANNQQYPAGVFWVYGFIFILYFILDYPLSAWAKRLTAK 215 Score = 38.5 bits (88), Expect = 2.1, Method: Compositional matrix adjust. Identities = 18/68 (26%), Positives = 38/68 (55%) Query: 82 DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141 + S ++ G + W+A +I +GT+ G R N+ + ++ R+Y+E FR +P Sbjct: 4 EGSNFARLMAGLWTSIWIAALSLIIGLAVGTIFGILRTLKNRPIRFVLRLYLEFFRIVPT 63 Query: 142 LVVIFFLY 149 +V+++ +Y Sbjct: 64 VVLLYLVY 71 >gi|297520268|ref|ZP_06938654.1| arginine transporter permease subunit ArtQ [Escherichia coli OP50] Length = 177 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 42/137 (30%), Positives = 75/137 (54%), Gaps = 1/137 (0%) Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321 VSP F+ IALS AA+ ++ +R L AVP GQ E+ ALGL+ +++PQ R Sbjct: 40 VSP-FLCGVIALSLLYAAYASQTLRGALKAVPVGQWESGQALGLSKSAIFFRLVMPQMWR 98 Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 +P L +Q+L LLK+++L + DL+ +I +T + ++ IYL ++++ Sbjct: 99 HALPGLGNQWLVLLKDTALVSLISVNDLMLQTKSIATRTQEPFTWYIVAAAIYLVITLLS 158 Query: 382 ALFMNRLNAKIALKEKK 398 + R++ + E++ Sbjct: 159 QYILKRIDLRATRFERR 175 >gi|167836672|ref|ZP_02463555.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Burkholderia thailandensis MSMB43] Length = 249 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 35/96 (36%), Positives = 58/96 (60%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P ++ ALS A++A V +G+ A GQ +A ++LGLT + R VLLPQA++ + Sbjct: 109 PGLAAVVCALSLVGGAYLAHSVHAGIRAAGDGQWQAGLSLGLTRWQTVRHVLLPQAVKIM 168 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359 P +Q+++L+K++SLA VG +L V + N+ Sbjct: 169 TPSFVNQWVSLVKDTSLAYIVGVPELSFVATQVNNR 204 >gi|86357760|ref|YP_469652.1| octopine ABC transporter, permease protein [Rhizobium etli CFN 42] gi|86281862|gb|ABC90925.1| octopine ABC transporter, permease protein [Rhizobium etli CFN 42] Length = 241 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 60/225 (26%), Positives = 111/225 (49%), Gaps = 10/225 (4%) Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235 L+ +T+ + F+ ++G V++ +LSRH T + L Y T ++ G+P L Sbjct: 23 LTAAAMTIGVSVCGFLTGTLIGTVVTFM--QLSRHL---TIRWLADCY--TTVLRGVPDL 75 Query: 236 VLIALKY--QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293 ++I L Y F + G F + G + P F++ +AL +AA+ AE+ R +V Sbjct: 76 LVIYLFYFGGSAFLGSLGGMFGYQGFIGM-PAFLTGTLALGAVSAAYQAEVFRGAYRSVA 134 Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353 RG++EAAIA+G+ R ++ P +R IP L + + +LK S+L G +L+ Sbjct: 135 RGEIEAAIAVGMRPWPKFRRIVAPLVLRYAIPGLGNTWQLVLKESALISVTGLVELLRQS 194 Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 T + E L + +YL ++ + ++ R+ A+ ++ Sbjct: 195 QIGAGSTRRPFEFYLTAVVLYLVITWLSSILFRRMEARTIQGTRR 239 Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust. Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 13/73 (17%) Query: 90 LVGFVNTFW-------------LAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136 LVGF T W ++ G + T+IGT+V +LS + + W+ Y V Sbjct: 10 LVGFGQTGWGWLLLTAAAMTIGVSVCGFLTGTLIGTVVTFMQLSRHLTIRWLADCYTTVL 69 Query: 137 RNIPPLVVIFFLY 149 R +P L+VI+ Y Sbjct: 70 RGVPDLLVIYLFY 82 >gi|266625817|ref|ZP_06118752.1| ABC transporter, permease protein, polar amino acid uptake family [Clostridium hathewayi DSM 13479] gi|288862281|gb|EFC94579.1| ABC transporter, permease protein, polar amino acid uptake family [Clostridium hathewayi DSM 13479] Length = 200 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 47/139 (33%), Positives = 72/139 (51%), Gaps = 5/139 (3%) Query: 260 STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319 S V P ++ AL+ AA+ +EI R+ L AV GQ EAA ++G+T +A ++ PQA Sbjct: 60 SVVPPAVYAI-AALTLDQAAYSSEIFRAALGAVDEGQREAAYSVGMTKLQAMTRIVFPQA 118 Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379 M +P L +L L+K +SLA VG ++ + + IE LI IY Sbjct: 119 MAVAMPNLGGLFLGLVKGTSLAYYVGVYEITATANLLAMPALNFIEAYLITTVIYE---- 174 Query: 380 MIALFMNRLNAKIALKEKK 398 +I+ F NRL + + K+ Sbjct: 175 LISFFFNRLFGTVETRLKR 193 >gi|237732153|ref|ZP_04562634.1| arginine transporter permease subunit ArtQ [Citrobacter sp. 30_2] gi|226907692|gb|EEH93610.1| arginine transporter permease subunit ArtQ [Citrobacter sp. 30_2] Length = 238 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 56/187 (29%), Positives = 95/187 (50%), Gaps = 10/187 (5%) Query: 217 KALPLLYISTFLIFGLPTLVLI---ALKYQLHFDK-PVLGQF-NFIGGSTVSPEFMSLYI 271 + LP + + F+ FG L+L L F + PV Q NF VSP F+ I Sbjct: 55 RGLPEILVVLFIYFGSSQLLLTLADGFTINLGFVQIPVQMQIENF----DVSP-FLCGVI 109 Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 ALS AA+ ++ +R L AVP GQ E+ ALGL+ +++PQ R +P L +Q+ Sbjct: 110 ALSLLYAAYASQTLRGALKAVPLGQWESGQALGLSKAAIFFRLVMPQMWRHALPGLGNQW 169 Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 L LLK+++L + DL+ +I +T + ++ IYL ++++ + R++ + Sbjct: 170 LVLLKDTALVSLISVNDLMLQTKSIATRTQEPFTWYIVAAAIYLVITLVSQYILKRIDLR 229 Query: 392 IALKEKK 398 E++ Sbjct: 230 ATRFERR 236 >gi|225854140|ref|YP_002735652.1| ABC transporter membrane-spanning permease - glutamine transport [Streptococcus pneumoniae JJA] gi|225723253|gb|ACO19106.1| ABC transporter membrane-spanning permease - glutamine transport [Streptococcus pneumoniae JJA] Length = 219 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 29/73 (39%), Positives = 51/73 (69%) Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 A + +T+A +AEI+R GL AV +GQ EA ++ G T + ++LPQA+R ++P + SQ+ Sbjct: 90 AFTLFTSAALAEIIRGGLNAVDKGQYEAGMSQGFTSAQILYYIILPQAIRKMLPAIISQF 149 Query: 332 LNLLKNSSLAVAV 344 + ++K++SL +V Sbjct: 150 VTVIKDTSLLYSV 162 Score = 39.3 bits (90), Expect = 0.99, Method: Compositional matrix adjust. Identities = 21/61 (34%), Positives = 36/61 (59%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 I GF T +++ +I +TIIGT++ R N ++ I +Y+E RN+P L+ IF + Sbjct: 16 IFKGFGLTLYISLIAIILSTIIGTVLAVMRNGKNSVLRIISSIYIEFVRNVPNLLWIFTI 75 Query: 149 Y 149 + Sbjct: 76 F 76 >gi|167841845|ref|ZP_02468529.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia thailandensis MSMB43] Length = 229 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 39/129 (30%), Positives = 71/129 (55%), Gaps = 2/129 (1%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +++S +A++ EIVRSGL +V Q EAA+ L + K R V++PQA R I+PP Sbjct: 102 VSVSLIASAYLGEIVRSGLESVHPNQREAAVTLNFGYLKMLRYVVVPQAWRVIVPPTFGF 161 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL-IWMFIYLSLSIMIALFMNRLN 389 ++ +K+++LA +G +L S G ++N G + ++ + +Y +S ++ F L Sbjct: 162 FVMFIKDTALASQIGVMELTS-AGKVLNDKGFSAGLVYGAILLLYFVMSYPLSRFGKHLE 220 Query: 390 AKIALKEKK 398 +A + Sbjct: 221 KSLAATRNR 229 >gi|153812543|ref|ZP_01965211.1| hypothetical protein RUMOBE_02942 [Ruminococcus obeum ATCC 29174] gi|149831468|gb|EDM86556.1| hypothetical protein RUMOBE_02942 [Ruminococcus obeum ATCC 29174] Length = 215 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 37/142 (26%), Positives = 76/142 (53%), Gaps = 1/142 (0%) Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 G F G + + +F ++ + S AA+ AEI RSG+ ++P GQ EAA LG + Sbjct: 71 FGPFYLWGMNIGNYKFTAIILGCSLNYAAYFAEIYRSGIESIPVGQYEAAQLLGYNKSQT 130 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370 ++LPQ ++ ++P +T++ + L+K++SL +V + ++ ++ I + ++ Sbjct: 131 FFKIVLPQVVKIVLPSVTNEVITLVKDTSLVYSVSYIEMFALAKQIAAAQTTVVPFVIAG 190 Query: 371 MFIYLSLSIMIALFMNRLNAKI 392 +F Y+ + ++A M K+ Sbjct: 191 VFYYI-FNFVVAWVMEWFEKKL 211 >gi|146278102|ref|YP_001168261.1| polar amino acid ABC transporter, inner membrane subunit [Rhodobacter sphaeroides ATCC 17025] gi|145556343|gb|ABP70956.1| polar amino acid ABC transporter, inner membrane subunit [Rhodobacter sphaeroides ATCC 17025] Length = 221 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 38/93 (40%), Positives = 59/93 (63%), Gaps = 1/93 (1%) Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317 G +SP F ++ +A +A+ AEI R+G+ +VP GQ EAA A GLT + V+LP Sbjct: 87 AGLAISP-FAAVAVAFFLNNSAYYAEIYRAGIQSVPTGQTEAARACGLTTGQTLAHVVLP 145 Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 QA+R+++P L S + ++K +SLA V A+L+ Sbjct: 146 QAVRNVLPDLLSNTVEVVKLTSLASVVSLAELL 178 >gi|293364949|ref|ZP_06611666.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus oralis ATCC 35037] gi|307703200|ref|ZP_07640146.1| binding-protein-dependent transport system inner membrane component family protein [Streptococcus oralis ATCC 35037] gi|291316399|gb|EFE56835.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus oralis ATCC 35037] gi|307623275|gb|EFO02266.1| binding-protein-dependent transport system inner membrane component family protein [Streptococcus oralis ATCC 35037] Length = 219 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 29/73 (39%), Positives = 51/73 (69%) Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 A + +T+A +AEI+R GL AV +GQ EA ++ G T + ++LPQA+R ++P + SQ+ Sbjct: 90 AFTLFTSAALAEIIRGGLNAVDKGQYEAGMSQGFTSAQILYYIILPQAIRKMLPAIISQF 149 Query: 332 LNLLKNSSLAVAV 344 + ++K++SL +V Sbjct: 150 VTVIKDTSLLYSV 162 Score = 37.4 bits (85), Expect = 3.9, Method: Compositional matrix adjust. Identities = 19/61 (31%), Positives = 36/61 (59%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 I GF T +++ ++ +T+IGT++ R N ++ I +Y+E RN+P L+ IF + Sbjct: 16 IFKGFGLTLYISLIAIVLSTLIGTVLAVMRNGKNPILRIISSIYIEFVRNVPNLLWIFTI 75 Query: 149 Y 149 + Sbjct: 76 F 76 >gi|317053915|ref|YP_004117940.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea sp. At-9b] gi|316951910|gb|ADU71384.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea sp. At-9b] Length = 227 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 38/123 (30%), Positives = 72/123 (58%), Gaps = 4/123 (3%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IAL AA+ +EI+R GL AV +EAA G++ R + LP A+R +P +++ Sbjct: 98 IALILNDAAYTSEILRGGLNAVSVQSLEAAKVCGMSRFTTLRRITLPIAIRQALPAYSNE 157 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM----IALFMN 386 ++++K++SL + ++ + +I+++T +A+E+ L IYL L+++ +AL Sbjct: 158 IISMIKSTSLVSTISLMEMTGIADSIVSETFRALEVFLSAAIIYLLLTVLVSKGVALLER 217 Query: 387 RLN 389 RL+ Sbjct: 218 RLS 220 >gi|224418905|ref|ZP_03656911.1| hypothetical protein HcanM9_06475 [Helicobacter canadensis MIT 98-5491] gi|253827858|ref|ZP_04870743.1| ABC-type amino acid transport system, permease component [Helicobacter canadensis MIT 98-5491] gi|313142419|ref|ZP_07804612.1| polar amino acid ABC transporter [Helicobacter canadensis MIT 98-5491] gi|253511264|gb|EES89923.1| ABC-type amino acid transport system, permease component [Helicobacter canadensis MIT 98-5491] gi|313131450|gb|EFR49067.1| polar amino acid ABC transporter [Helicobacter canadensis MIT 98-5491] Length = 217 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 46/171 (26%), Positives = 85/171 (49%), Gaps = 29/171 (16%) Query: 191 VFSFVLGIVLSL---FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247 +F FVLG +++L F + L R F+ ++ + +P+L + FG + + Sbjct: 33 IFGFVLGYLMTLPNRFLSFLCR-FYLESIRIIPILAWLFIVYFGFSSFL----------- 80 Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307 N IG + S + A + ++VR + ++PR Q E+ ALGL+ Sbjct: 81 -----NLNGIGACI---------LVFSLWGIAEMGDLVRGAISSLPRHQSESGRALGLSE 126 Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN 358 + ++LPQ+ R ++PPL + + ++K +SLA +G +D++ VG II Sbjct: 127 IQIQVFIILPQSFRRLLPPLVNLFTRMIKTTSLAALIGVSDMLKVGQQIIE 177 >gi|163742836|ref|ZP_02150220.1| amino acid ABC transporter, permease protein [Phaeobacter gallaeciensis 2.10] gi|161383800|gb|EDQ08185.1| amino acid ABC transporter, permease protein [Phaeobacter gallaeciensis 2.10] Length = 446 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 31/80 (38%), Positives = 53/80 (66%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + + + +A++AE VR GL V GQ EAA +LGL + K LV+LPQA++++IP + S Sbjct: 314 VGVCLFFSAYMAETVRGGLQVVAVGQTEAAKSLGLGYWKTMYLVVLPQALKAMIPNIVSN 373 Query: 331 YLNLLKNSSLAVAVGFADLV 350 ++ L K+++L +G D++ Sbjct: 374 FIALFKDTTLVSIIGLYDML 393 >gi|146318204|ref|YP_001197916.1| amino acid (glutamine) ABC transporter, permease protein [Streptococcus suis 05ZYH33] gi|146320398|ref|YP_001200109.1| amino acid (glutamine) ABC transporter, permease protein [Streptococcus suis 98HAH33] gi|253751386|ref|YP_003024527.1| putative amino acid ABC transporter permease protein [Streptococcus suis SC84] gi|253753287|ref|YP_003026427.1| amino acid ABC transporter permease protein [Streptococcus suis P1/7] gi|253755882|ref|YP_003029022.1| amino acid ABC transporter permease protein [Streptococcus suis BM407] gi|145689010|gb|ABP89516.1| amino acid (glutamine) ABC transporter, permease protein [Streptococcus suis 05ZYH33] gi|145691204|gb|ABP91709.1| amino acid (glutamine) ABC transporter, permease protein [Streptococcus suis 98HAH33] gi|251815675|emb|CAZ51263.1| putative amino acid ABC transporter permease protein [Streptococcus suis SC84] gi|251818346|emb|CAZ56170.1| putative amino acid ABC transporter permease protein [Streptococcus suis BM407] gi|251819532|emb|CAR45120.1| putative amino acid ABC transporter permease protein [Streptococcus suis P1/7] gi|292558005|gb|ADE31006.1| amino acid (glutamine) ABC transporter, permease protein [Streptococcus suis GZ1] gi|319757672|gb|ADV69614.1| amino acid (glutamine) ABC transporter, permease protein [Streptococcus suis JS14] Length = 213 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 31/91 (34%), Positives = 56/91 (61%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +A + AA+ +EI R G+ A+P+GQ EAA L T + R ++LPQ ++ ++P + ++ Sbjct: 89 LAFTLNYAAYFSEIFRGGIEAIPKGQYEAAKVLKFTPVQTIRYIVLPQVVKIVLPSVFNE 148 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361 + L+K++SL A+G +DL+ T N+ Sbjct: 149 VMTLVKDTSLVYALGVSDLLLASRTAANRDA 179 >gi|49079084|gb|AAT49852.1| PA1257 [synthetic construct] Length = 215 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 37/128 (28%), Positives = 74/128 (57%), Gaps = 4/128 (3%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + L Y AA+ AE+VR G+++VP AA +LGL++R+ ++LP A R P + Sbjct: 91 LVLGVYAAAYCAEVVRGGVLSVPPSVRRAARSLGLSYRQDLFHIVLPMAARVAFPGWVNL 150 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 L+++K++SL + +G +L+ TI+ + + + ++ I +Y +S ++A RL A Sbjct: 151 TLSVMKDTSLVLWIGIVELLRASQTIVTRIQEPLFVLCIAGLVYYLMSWVVA----RLGA 206 Query: 391 KIALKEKK 398 ++ + ++ Sbjct: 207 RLERRWQQ 214 >gi|126463864|ref|YP_001044977.1| polar amino acid ABC transporter, inner membrane subunit [Rhodobacter sphaeroides ATCC 17029] gi|126105675|gb|ABN78205.1| polar amino acid ABC transporter, inner membrane subunit [Rhodobacter sphaeroides ATCC 17029] Length = 221 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 38/93 (40%), Positives = 59/93 (63%), Gaps = 1/93 (1%) Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317 G +SP F ++ +A +A+ AEI R+G+ +VP GQ EAA A GLT + V+LP Sbjct: 87 AGLAISP-FAAVAVAFFLNNSAYYAEIYRAGIQSVPAGQTEAARACGLTTGQTLAHVVLP 145 Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 QA+R+++P L S + ++K +SLA V A+L+ Sbjct: 146 QAVRNVLPDLLSNTVEVVKLTSLASVVSLAELL 178 >gi|296102998|ref|YP_003613144.1| allantoate transport membrane protein [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295057457|gb|ADF62195.1| allantoate transport membrane protein [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 219 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 38/108 (35%), Positives = 62/108 (57%), Gaps = 1/108 (0%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G VSP + + +AL+ YT+AF+ +I + A+P+GQ EA+ LGLT + V+ PQ Sbjct: 81 GIDVSP-WTAASLALTFYTSAFLLDIWFGSIRALPKGQWEASRCLGLTFGQTLYRVVAPQ 139 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 A+R I P + ++K ++LA +GF +L G + N T Q ++ Sbjct: 140 ALRIAIAPTVGFAVQVIKGTALASIIGFIELTKAGTMLTNVTYQPFKV 187 >gi|218704289|ref|YP_002411808.1| arginine permease ArtQ [Escherichia coli UMN026] gi|293404167|ref|ZP_06648161.1| arginine transporter permease subunit ArtQ [Escherichia coli FVEC1412] gi|300901229|ref|ZP_07119330.1| ABC transporter, permease protein [Escherichia coli MS 198-1] gi|301020604|ref|ZP_07184681.1| ABC transporter, permease protein [Escherichia coli MS 69-1] gi|331662274|ref|ZP_08363197.1| arginine transport system permease protein ArtQ [Escherichia coli TA143] gi|218431386|emb|CAR12264.1| arginine transporter subunit ;membrane component of ABC superfamily [Escherichia coli UMN026] gi|291428753|gb|EFF01778.1| arginine transporter permease subunit ArtQ [Escherichia coli FVEC1412] gi|300355303|gb|EFJ71173.1| ABC transporter, permease protein [Escherichia coli MS 198-1] gi|300398622|gb|EFJ82160.1| ABC transporter, permease protein [Escherichia coli MS 69-1] gi|331060696|gb|EGI32660.1| arginine transport system permease protein ArtQ [Escherichia coli TA143] Length = 238 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 55/186 (29%), Positives = 95/186 (51%), Gaps = 8/186 (4%) Query: 217 KALPLLYISTFLIFGLPTLVLI---ALKYQLHFDK-PVLGQFNFIGGSTVSPEFMSLYIA 272 + LP + + F+ FG L+L L F + PV Q + I VSP F+ IA Sbjct: 55 RGLPEILVVLFIYFGSSQLLLTLSDGFTINLGFVQIPV--QMD-IENFDVSP-FLCGVIA 110 Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 LS AA+ ++ +R L AVP GQ E+ ALGL+ +++PQ R +P L +Q+L Sbjct: 111 LSLLYAAYASQTLRGALKAVPMGQWESGQALGLSKSAIFFRLVMPQMWRHALPGLGNQWL 170 Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 LLK+++L + DL+ +I +T + ++ IYL ++++ + R++ + Sbjct: 171 VLLKDTALVSLISVNDLMLQTKSIATRTQEPFTWYIVAAAIYLVITLLSQYILKRIDLRA 230 Query: 393 ALKEKK 398 E++ Sbjct: 231 TRFERR 236 >gi|91209896|ref|YP_539882.1| arginine transporter permease subunit ArtQ [Escherichia coli UTI89] gi|110641063|ref|YP_668793.1| arginine transporter permease subunit ArtQ [Escherichia coli 536] gi|117623042|ref|YP_851955.1| arginine transporter permease subunit ArtQ [Escherichia coli APEC O1] gi|191172131|ref|ZP_03033675.1| arginine ABC transporter, permease protein ArtQ [Escherichia coli F11] gi|218557766|ref|YP_002390679.1| arginine transporter permease subunit ArtQ [Escherichia coli S88] gi|218688644|ref|YP_002396856.1| arginine transporter permease subunit ArtQ [Escherichia coli ED1a] gi|237707174|ref|ZP_04537655.1| arginine transporter permease subunit ArtQ [Escherichia sp. 3_2_53FAA] gi|300991844|ref|ZP_07179669.1| ABC transporter, permease protein [Escherichia coli MS 200-1] gi|306812689|ref|ZP_07446882.1| arginine transporter permease subunit ArtQ [Escherichia coli NC101] gi|91071470|gb|ABE06351.1| arginine 3rd transport system permease protein [Escherichia coli UTI89] gi|110342655|gb|ABG68892.1| arginine transport system permease protein ArtQ [Escherichia coli 536] gi|115512166|gb|ABJ00241.1| arginine 3rd transport system permease protein [Escherichia coli APEC O1] gi|190907658|gb|EDV67253.1| arginine ABC transporter, permease protein ArtQ [Escherichia coli F11] gi|218364535|emb|CAR02217.1| arginine transporter subunit ;membrane component of ABC superfamily [Escherichia coli S88] gi|218426208|emb|CAR07032.1| arginine transporter subunit ;membrane component of ABC superfamily [Escherichia coli ED1a] gi|226898384|gb|EEH84643.1| arginine transporter permease subunit ArtQ [Escherichia sp. 3_2_53FAA] gi|294493134|gb|ADE91890.1| arginine ABC transporter, permease protein ArtQ [Escherichia coli IHE3034] gi|300305454|gb|EFJ59974.1| ABC transporter, permease protein [Escherichia coli MS 200-1] gi|305853452|gb|EFM53891.1| arginine transporter permease subunit ArtQ [Escherichia coli NC101] gi|307627729|gb|ADN72033.1| arginine transporter permease subunit ArtQ [Escherichia coli UM146] gi|315287306|gb|EFU46717.1| ABC transporter, permease protein [Escherichia coli MS 110-3] gi|315299389|gb|EFU58641.1| ABC transporter, permease protein [Escherichia coli MS 16-3] gi|320196643|gb|EFW71266.1| Arginine ABC transporter, permease protein ArtQ [Escherichia coli WV_060327] gi|323953434|gb|EGB49300.1| inner membrane transport system [Escherichia coli H252] gi|323958151|gb|EGB53860.1| inner membrane transport system [Escherichia coli H263] gi|324009772|gb|EGB78991.1| ABC transporter, permease protein [Escherichia coli MS 57-2] gi|324013024|gb|EGB82243.1| ABC transporter, permease protein [Escherichia coli MS 60-1] Length = 238 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 55/186 (29%), Positives = 95/186 (51%), Gaps = 8/186 (4%) Query: 217 KALPLLYISTFLIFGLPTLVLI---ALKYQLHFDK-PVLGQFNFIGGSTVSPEFMSLYIA 272 + LP + + F+ FG L+L L F + PV Q + I VSP F+ IA Sbjct: 55 RGLPEILVVLFIYFGSSQLLLTLSDGFTINLGFVQIPV--QMD-IENFDVSP-FLCGVIA 110 Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 LS AA+ ++ +R L AVP GQ E+ ALGL+ +++PQ R +P L +Q+L Sbjct: 111 LSLLYAAYASQTLRGALKAVPVGQWESGQALGLSKSAIFFRLVMPQMWRHALPGLGNQWL 170 Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 LLK+++L + DL+ +I +T + ++ IYL ++++ + R++ + Sbjct: 171 VLLKDTALVSLISVNDLMLQTKSIATRTQEPFTWYIVAAVIYLVITLLSQYILKRIDLRA 230 Query: 393 ALKEKK 398 E++ Sbjct: 231 TRFERR 236 >gi|53718672|ref|YP_107658.1| histidine transport system permease [Burkholderia pseudomallei K96243] gi|76809678|ref|YP_332658.1| histidine transport system permease [Burkholderia pseudomallei 1710b] gi|126439463|ref|YP_001058139.1| histidine ABC transporter, permease protein HisQ [Burkholderia pseudomallei 668] gi|126455408|ref|YP_001065374.1| histidine ABC transporter, permease protein HisQ [Burkholderia pseudomallei 1106a] gi|134281279|ref|ZP_01767988.1| histidine ABC transporter, permease protein HisQ [Burkholderia pseudomallei 305] gi|167718615|ref|ZP_02401851.1| histidine ABC transporter, permease protein HisQ [Burkholderia pseudomallei DM98] gi|167737643|ref|ZP_02410417.1| histidine ABC transporter, permease protein HisQ [Burkholderia pseudomallei 14] gi|167814778|ref|ZP_02446458.1| histidine ABC transporter, permease protein HisQ [Burkholderia pseudomallei 91] gi|167823232|ref|ZP_02454703.1| histidine ABC transporter, permease protein HisQ [Burkholderia pseudomallei 9] gi|167851714|ref|ZP_02477222.1| histidine ABC transporter, permease protein HisQ [Burkholderia pseudomallei B7210] gi|167900311|ref|ZP_02487712.1| histidine ABC transporter, permease protein HisQ [Burkholderia pseudomallei 7894] gi|167908463|ref|ZP_02495668.1| histidine ABC transporter, permease protein HisQ [Burkholderia pseudomallei NCTC 13177] gi|167916791|ref|ZP_02503882.1| histidine ABC transporter, permease protein HisQ [Burkholderia pseudomallei 112] gi|167918057|ref|ZP_02505148.1| histidine ABC transporter, permease protein HisQ [Burkholderia pseudomallei BCC215] gi|217420034|ref|ZP_03451540.1| histidine ABC transporter, permease protein HisQ [Burkholderia pseudomallei 576] gi|226194409|ref|ZP_03790007.1| histidine ABC transporter, permease protein HisQ [Burkholderia pseudomallei Pakistan 9] gi|237811358|ref|YP_002895809.1| histidine transport system permease protein HisQ [Burkholderia pseudomallei MSHR346] gi|242315876|ref|ZP_04814892.1| histidine ABC transporter, permease protein HisQ [Burkholderia pseudomallei 1106b] gi|254181369|ref|ZP_04887966.1| histidine ABC transporter, permease protein HisQ [Burkholderia pseudomallei 1655] gi|254190769|ref|ZP_04897276.1| histidine ABC transporter, permease protein HisQ [Burkholderia pseudomallei Pasteur 52237] gi|254196202|ref|ZP_04902626.1| histidine ABC transporter, permease protein HisQ [Burkholderia pseudomallei S13] gi|254258583|ref|ZP_04949637.1| histidine ABC transporter, permease protein HisQ [Burkholderia pseudomallei 1710a] gi|254298304|ref|ZP_04965756.1| histidine ABC transporter, permease protein HisQ [Burkholderia pseudomallei 406e] gi|52209086|emb|CAH35027.1| histidine transport system permease protein [Burkholderia pseudomallei K96243] gi|76579131|gb|ABA48606.1| histidine transport system permease protein [Burkholderia pseudomallei 1710b] gi|126218956|gb|ABN82462.1| histidine ABC transporter, permease protein HisQ [Burkholderia pseudomallei 668] gi|126229050|gb|ABN92590.1| histidine ABC transporter, permease protein HisQ [Burkholderia pseudomallei 1106a] gi|134247585|gb|EBA47670.1| histidine ABC transporter, permease protein HisQ [Burkholderia pseudomallei 305] gi|157808176|gb|EDO85346.1| histidine ABC transporter, permease protein HisQ [Burkholderia pseudomallei 406e] gi|157938444|gb|EDO94114.1| histidine ABC transporter, permease protein HisQ [Burkholderia pseudomallei Pasteur 52237] gi|169652945|gb|EDS85638.1| histidine ABC transporter, permease protein HisQ [Burkholderia pseudomallei S13] gi|184211907|gb|EDU08950.1| histidine ABC transporter, permease protein HisQ [Burkholderia pseudomallei 1655] gi|217397338|gb|EEC37354.1| histidine ABC transporter, permease protein HisQ [Burkholderia pseudomallei 576] gi|225933494|gb|EEH29483.1| histidine ABC transporter, permease protein HisQ [Burkholderia pseudomallei Pakistan 9] gi|237503472|gb|ACQ95790.1| histidine transport system permease protein HisQ [Burkholderia pseudomallei MSHR346] gi|242139115|gb|EES25517.1| histidine ABC transporter, permease protein HisQ [Burkholderia pseudomallei 1106b] gi|254217272|gb|EET06656.1| histidine ABC transporter, permease protein HisQ [Burkholderia pseudomallei 1710a] Length = 229 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 52/160 (32%), Positives = 82/160 (51%), Gaps = 9/160 (5%) Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALK-YQLHFDKPVL 251 SF+LG+V + A +LSR+ + + LY T LI G+P LVL+ L Y L L Sbjct: 28 SFLLGLVGA--AAKLSRN---RVSNGIGTLY--TTLIRGVPDLVLMLLLFYSLQIWLNQL 80 Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311 + P F + + L A+ E R ++VPRGQ+EA A G+T+ + Sbjct: 81 TDLMNWDQIDIDP-FAAGVLVLGFIYGAYFTETFRGAFLSVPRGQLEAGSAYGMTNWQVF 139 Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 V+ PQ MR +P + + + L+K+++L +G AD+V Sbjct: 140 ARVMFPQMMRFALPGIGNNWQVLVKSTALVSIIGLADVVK 179 >gi|149909992|ref|ZP_01898641.1| amino acid ABC transporter, permease protein [Moritella sp. PE36] gi|149807006|gb|EDM66965.1| amino acid ABC transporter, permease protein [Moritella sp. PE36] Length = 254 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 57/228 (25%), Positives = 106/228 (46%), Gaps = 29/228 (12%) Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL------- 240 K+ +FS V+ ++L L T ++R+ K L + Y S L+ G+P LVL+ L Sbjct: 20 KLAIFSLVIAVLLGLI-TAVARYSGGKISSVLAVSYTS--LVRGVPDLVLMMLIYFGLQV 76 Query: 241 --------KYQLHFDKPVLGQFNFIGGSTVS-----------PEFMSLYIALSCYTAAFI 281 Y+LH + + G T+S EF + + + A++ Sbjct: 77 GLNNFSEWLYELHETYAINAFYIEHGWLTLSAFYEDGMYFNIDEFSAGVLTIGFIFGAYM 136 Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341 E R L++V +GQ+EAA A G++ + V+ PQ MR +P + + +L L+K ++L Sbjct: 137 GETFRGALLSVDKGQLEAATAYGMSDWQVFHRVMFPQMMRFALPGIGNNWLVLVKTTALV 196 Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 +G +D+V + T + + F+YL+++ + + + L Sbjct: 197 SIIGLSDMVKLAKEAAMTTFEPFLFFIPVAFVYLAITTVSEIVLKYLE 244 >gi|15596454|ref|NP_249948.1| amino acid ABC transporter membrane protein [Pseudomonas aeruginosa PAO1] gi|107100706|ref|ZP_01364624.1| hypothetical protein PaerPA_01001733 [Pseudomonas aeruginosa PACS2] gi|9947189|gb|AAG04646.1|AE004555_6 amino acid ABC transporter membrane protein [Pseudomonas aeruginosa PAO1] Length = 214 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 37/128 (28%), Positives = 74/128 (57%), Gaps = 4/128 (3%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + L Y AA+ AE+VR G+++VP AA +LGL++R+ ++LP A R P + Sbjct: 91 LVLGVYAAAYCAEVVRGGVLSVPPSVRRAARSLGLSYRQDLFHIVLPMAARVAFPGWVNL 150 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 L+++K++SL + +G +L+ TI+ + + + ++ I +Y +S ++A RL A Sbjct: 151 TLSVMKDTSLVLWIGIVELLRASQTIVTRIQEPLFVLCIAGLVYYLMSWVVA----RLGA 206 Query: 391 KIALKEKK 398 ++ + ++ Sbjct: 207 RLERRWQQ 214 >gi|194433150|ref|ZP_03065432.1| arginine ABC transporter, permease protein ArtQ [Shigella dysenteriae 1012] gi|194418647|gb|EDX34734.1| arginine ABC transporter, permease protein ArtQ [Shigella dysenteriae 1012] gi|320177804|gb|EFW52790.1| Arginine ABC transporter, permease protein ArtQ [Shigella boydii ATCC 9905] gi|332091031|gb|EGI96121.1| arginine transport system permease protein artQ [Shigella dysenteriae 155-74] Length = 238 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 55/186 (29%), Positives = 95/186 (51%), Gaps = 8/186 (4%) Query: 217 KALPLLYISTFLIFGLPTLVLI---ALKYQLHFDK-PVLGQFNFIGGSTVSPEFMSLYIA 272 + LP + + F+ FG L+L L F + PV Q + I VSP F+ IA Sbjct: 55 RGLPEILVVLFIYFGSSQLLLTLSDGFTINLGFVQIPV--QMD-IENFDVSP-FLCGVIA 110 Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 LS AA+ ++ +R L AVP GQ E+ ALGL+ +++PQ R +P L +Q+L Sbjct: 111 LSLLYAAYASQTLRGALKAVPMGQWESGQALGLSKSAIFFRLVMPQMWRHALPGLGNQWL 170 Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 LLK+++L + DL+ +I +T + ++ IYL ++++ + R++ + Sbjct: 171 VLLKDTALVSLISVNDLMLQTKSIATRTQEPFTWYIVAAAIYLVITLLSQYILKRIDLRA 230 Query: 393 ALKEKK 398 E++ Sbjct: 231 TRFERR 236 >gi|23464651|ref|NP_695254.1| permease protein of ABC transporter for glutamate [Bifidobacterium longum NCC2705] gi|239620727|ref|ZP_04663758.1| glutamate transport system permease protein gluC [Bifidobacterium longum subsp. infantis CCUG 52486] gi|312132338|ref|YP_003999677.1| hism1 [Bifidobacterium longum subsp. longum BBMN68] gi|322689656|ref|YP_004209390.1| glutamate ABC transporter permease [Bifidobacterium longum subsp. infantis 157F] gi|23325210|gb|AAN23890.1| permease protein of ABC transporter for glutamate [Bifidobacterium longum NCC2705] gi|239516303|gb|EEQ56170.1| glutamate transport system permease protein gluC [Bifidobacterium longum subsp. infantis CCUG 52486] gi|311773869|gb|ADQ03357.1| HisM1 [Bifidobacterium longum subsp. longum BBMN68] gi|320460992|dbj|BAJ71612.1| glutamate ABC transporter permease component [Bifidobacterium longum subsp. infantis 157F] Length = 225 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 66/215 (30%), Positives = 100/215 (46%), Gaps = 27/215 (12%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPTLVLIALKYQL 244 +FS +LG++L + G K LPL I F++ G + +L Sbjct: 29 LFSLILGVILVVMRISPISSLRAVAGAYVELFKNLPLTIIMVFMVLGAYA------QLKL 82 Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYI-ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 F T + F L + LS YTAAF+ E +RSG+ VP GQ EAA AL Sbjct: 83 SFSD------------TFATNFFWLAVTGLSLYTAAFVCESLRSGINTVPIGQAEAARAL 130 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN-SSLAVAVGFADLVSVGGTIIN-QTG 361 GL ++ ++LPQA R + PL + + LLKN + A A + S+ +I + Sbjct: 131 GLGFMQSATEIILPQAFRGSVAPLGNTLIALLKNSTVAAAASVATETSSLMSEMIEFRPD 190 Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 I+I LI+ Y+ L I I + L+ K+A++ Sbjct: 191 VIIQIFLIFALGYVILIIPIGMLTTYLSNKLAVRR 225 >gi|257125144|ref|YP_003163258.1| polar amino acid ABC transporter inner membrane protein [Leptotrichia buccalis C-1013-b] gi|257049083|gb|ACV38267.1| polar amino acid ABC transporter, inner membrane subunit [Leptotrichia buccalis C-1013-b] Length = 237 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 50/178 (28%), Positives = 93/178 (52%), Gaps = 15/178 (8%) Query: 217 KALPLLYISTFLIFGLPTLV-LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSC 275 + PLL +GLP ++ I LKY + D N I P + +Y+A Sbjct: 68 RGTPLLVQIYLAYYGLPKILDYIHLKYGFNID------VNNI------PAIIFVYVAFIL 115 Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335 + +++E R+ + +V +GQ+EAA+++G+T +A R ++LPQA+ P + +++L+ Sbjct: 116 NVSGYLSETFRAAIQSVDKGQVEAALSIGMTKWQAMRRIVLPQAIIITFPNFGNTFISLI 175 Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAI-EIILIWMFIYLSLSIMIALFMNRLNAKI 392 K+SSLA V +++ II+ +G I E ++ IY + I++ M + K+ Sbjct: 176 KDSSLAFTVSIVEMMG-KAKIISASGLDIFEAYIVVAGIYWVVCIIVEKVMGIVEKKL 232 >gi|221369463|ref|YP_002520559.1| Polar amino acid ABC transporter, inner membrane subunit [Rhodobacter sphaeroides KD131] gi|221162515|gb|ACM03486.1| Polar amino acid ABC transporter, inner membrane subunit [Rhodobacter sphaeroides KD131] Length = 221 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 38/93 (40%), Positives = 59/93 (63%), Gaps = 1/93 (1%) Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317 G +SP F ++ +A +A+ AEI R+G+ +VP GQ EAA A GLT + V+LP Sbjct: 87 AGLAISP-FAAVAVAFFLNNSAYYAEIYRAGIQSVPAGQTEAARACGLTTGQTLAHVVLP 145 Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 QA+R+++P L S + ++K +SLA V A+L+ Sbjct: 146 QAVRNVLPDLLSNTVEVVKLTSLASVVSLAELL 178 >gi|167562818|ref|ZP_02355734.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Burkholderia oklahomensis EO147] Length = 206 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 46/143 (32%), Positives = 74/143 (51%), Gaps = 23/143 (16%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 +A+P+L + + F LP L LH D P L ++ ALS Sbjct: 29 RAIPVLMLIFWTYFLLPVL--------LHADVPGLA---------------AVVCALSLV 65 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 A++A V +G+ A GQ +A ++LGLT + R VLLPQA++ + P +Q+++L+K Sbjct: 66 GGAYLAHSVHAGIRAAGAGQWQAGLSLGLTRWQTVRYVLLPQAVKIMTPSFVNQWVSLVK 125 Query: 337 NSSLAVAVGFADLVSVGGTIINQ 359 ++SLA VG +L V + N+ Sbjct: 126 DTSLAYIVGVPELSFVATQVNNR 148 >gi|149005716|ref|ZP_01829455.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP18-BS74] gi|303260099|ref|ZP_07346072.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP-BS293] gi|303261283|ref|ZP_07347231.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP14-BS292] gi|303263948|ref|ZP_07349869.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae BS397] gi|303265939|ref|ZP_07351835.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae BS457] gi|303268321|ref|ZP_07354118.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae BS458] gi|307126806|ref|YP_003878837.1| glutamine ABC transporter membrane-spanning permease [Streptococcus pneumoniae 670-6B] gi|147762656|gb|EDK69616.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP18-BS74] gi|302637417|gb|EFL67904.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP14-BS292] gi|302638794|gb|EFL69256.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP-BS293] gi|302642159|gb|EFL72509.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae BS458] gi|302644523|gb|EFL74774.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae BS457] gi|302646353|gb|EFL76579.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae BS397] gi|306483868|gb|ADM90737.1| ABC transporter membrane-spanning permease - glutamine transport [Streptococcus pneumoniae 670-6B] gi|332077037|gb|EGI87499.1| amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Streptococcus pneumoniae GA17545] Length = 219 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 29/73 (39%), Positives = 51/73 (69%) Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 A + +T+A +AEI+R GL AV +GQ EA ++ G T + ++LPQA+R ++P + SQ+ Sbjct: 90 AFTLFTSAALAEIIRGGLNAVDKGQYEAGMSQGFTSAQILYYIILPQAIRKMLPAIISQF 149 Query: 332 LNLLKNSSLAVAV 344 + ++K++SL +V Sbjct: 150 VTVIKDTSLLYSV 162 Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust. Identities = 21/61 (34%), Positives = 36/61 (59%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 I GF T +++ +I +TIIGT++ R N ++ I +Y+E RN+P L+ IF + Sbjct: 16 IFKGFGLTLYISLIAIILSTIIGTVLAVMRNGKNPILRIISSIYIEFVRNVPNLLWIFTI 75 Query: 149 Y 149 + Sbjct: 76 F 76 >gi|16079987|ref|NP_390813.1| sulfur-containing amino acid ABC transporter permease [Bacillus subtilis subsp. subtilis str. 168] gi|221310879|ref|ZP_03592726.1| hypothetical protein Bsubs1_16021 [Bacillus subtilis subsp. subtilis str. 168] gi|221315204|ref|ZP_03597009.1| hypothetical protein BsubsN3_15917 [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221320122|ref|ZP_03601416.1| hypothetical protein BsubsJ_15833 [Bacillus subtilis subsp. subtilis str. JH642] gi|221324404|ref|ZP_03605698.1| hypothetical protein BsubsS_15992 [Bacillus subtilis subsp. subtilis str. SMY] gi|7674451|sp|O34931|TCYM_BACSU RecName: Full=L-cystine transport system permease protein tcyM gi|2293250|gb|AAC00328.1| transporter [Bacillus subtilis] gi|2635400|emb|CAB14895.1| sulfur-containing amino acid ABC transporter (permease) [Bacillus subtilis subsp. subtilis str. 168] Length = 235 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 37/118 (31%), Positives = 67/118 (56%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P M + +ALS A++ EI+RSG++A+ GQ+EAA ++GLT+ + R V+LPQA++ Sbjct: 99 PVSMFVIMALSLTAGAYLTEIIRSGILAMDTGQVEAAYSIGLTYSQTFRRVILPQALKVS 158 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 IP T+ + L +S+A V ++ + + +E + IY L++++ Sbjct: 159 IPNFTNLGIGFLHTTSIAAIVAVPEITGTATIVASDNYAFLEAFIGAAIIYWVLTLIL 216 >gi|225860605|ref|YP_002742114.1| ABC transporter membrane-spanning permease - glutamine transport [Streptococcus pneumoniae Taiwan19F-14] gi|225727812|gb|ACO23663.1| ABC transporter membrane-spanning permease - glutamine transport [Streptococcus pneumoniae Taiwan19F-14] gi|327390342|gb|EGE88683.1| amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Streptococcus pneumoniae GA04375] Length = 219 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 29/73 (39%), Positives = 51/73 (69%) Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 A + +T+A +AEI+R GL AV +GQ EA ++ G T + ++LPQA+R ++P + SQ+ Sbjct: 90 AFTLFTSAALAEIIRGGLNAVDKGQYEAGMSQGFTSAQILYYIILPQAIRKMLPAIISQF 149 Query: 332 LNLLKNSSLAVAV 344 + ++K++SL +V Sbjct: 150 VTVIKDTSLLYSV 162 Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust. Identities = 21/61 (34%), Positives = 36/61 (59%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 I GF T +++ +I +TIIGT++ R N ++ I +Y+E RN+P L+ IF + Sbjct: 16 IFKGFGLTLYISLIAIILSTIIGTVLAVMRNGKNPILRIISSIYIEFVRNVPNLLWIFTI 75 Query: 149 Y 149 + Sbjct: 76 F 76 >gi|209515404|ref|ZP_03264270.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. H160] gi|209504124|gb|EEA04114.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. H160] Length = 218 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 56/198 (28%), Positives = 96/198 (48%), Gaps = 34/198 (17%) Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTG--------KALPLLYISTFLIFGLPTLVLIALK 241 + S VLG+ +L ++SR+ H G + LP++ + ++ F LP Sbjct: 28 LLLSTVLGLTWALL--KMSRYPHVVRGVSAMINVVRGLPMIVLLFYIYFVLP-------- 77 Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301 +H L Q + IG L + +IAEI R+G+ AV GQ EAA Sbjct: 78 -DIHIQVTAL-QASIIG--------------LGFGYSTYIAEIFRAGIEAVDPGQYEAAQ 121 Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361 ++G+ K V+LPQA++ +PP ++ + +LK+SSLA + A++ G I + T Sbjct: 122 SIGMGRVKTMVRVILPQAIKVALPPYSNTLVMMLKDSSLASTITVAEMTREGQLIASSTF 181 Query: 362 QAIEIILIWMFIYLSLSI 379 Q + + + YL++S+ Sbjct: 182 QNLTVYTLVALGYLAMSL 199 >gi|68249725|ref|YP_248837.1| arginine transporter permease subunit ArtQ [Haemophilus influenzae 86-028NP] gi|68057924|gb|AAX88177.1| arginine transport system permease protein [Haemophilus influenzae 86-028NP] Length = 221 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 46/172 (26%), Positives = 87/172 (50%), Gaps = 8/172 (4%) Query: 228 LIFGLPTLVLIALKY--QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285 L+ GLP ++++ L Y + + G++ G F ALS AA+ ++ + Sbjct: 53 LLRGLPEIIVVLLVYFGSTELVEILTGEYIEFGA------FGCGVFALSLIFAAYASQTL 106 Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345 R + A+P+GQ E+ ALGL+ +++PQ R +P L++Q+L LLK+++L +G Sbjct: 107 RGAIQAIPKGQWESGAALGLSKSYTFIHIVMPQVWRHALPGLSNQWLVLLKDTALVSLIG 166 Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 DL+ + T Q I IYL+++++ + + +L + E+ Sbjct: 167 VDDLIHQADLMNTNTHQPFTWYGIAALIYLAVTLISQVGIRKLELRFTRFER 218 >gi|33595040|ref|NP_882683.1| glutamate/aspartate transport system permease protein [Bordetella parapertussis 12822] gi|33565117|emb|CAE35912.1| glutamate/aspartate transport system permease protein [Bordetella parapertussis] Length = 227 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 42/150 (28%), Positives = 81/150 (54%), Gaps = 15/150 (10%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 ++LPL+ + + F LP L L++ ++P+ + G+T S ++ + Sbjct: 65 RSLPLVLVIFLIYFILPYL----LQWITQAERPI------VLGATGSA-----FVTFILF 109 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 AA+ +EI+R+G+ +V GQ A ALGLTH + R V+LPQA+R+++P L +Q + + + Sbjct: 110 EAAYFSEIIRAGIGSVGPGQYAAGSALGLTHGQVLRKVILPQAVRNMLPVLLTQVIVIFQ 169 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 ++L + D + I + + +E+ Sbjct: 170 ETALVYVLSLPDFLGAATKIAQRDNRLVEM 199 Score = 42.4 bits (98), Expect = 0.13, Method: Compositional matrix adjust. Identities = 20/60 (33%), Positives = 33/60 (55%) Query: 90 LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 L G + L S ++G L+ RL + VAW+ +YV +FR++P ++VIF +Y Sbjct: 18 LTGLRFSLLLTLSSAAGGVVLGALLAIARLYGRRWVAWLAAIYVNLFRSLPLVLVIFLIY 77 >gi|183396653|dbj|BAG28252.1| permease protein of amino acid ABC transporter [Desulfotignum balticum] Length = 220 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 61/212 (28%), Positives = 104/212 (49%), Gaps = 28/212 (13%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV--LIALKYQLHFDK 248 VFSFVL + +S+ L ++G+ LP +V L+ + ++ + Sbjct: 27 VFSFVLALAVSVLVGVL------RSGR--------------LPWIVDFLLGVYVEIFRNT 66 Query: 249 PVLGQFNFI--GGST---VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 P+L Q FI G T V P + I LS + A+++E VR+ + +V +GQ EAA +L Sbjct: 67 PLLIQLFFIYYGLPTFGIVLPPVTAAVIGLSLNSGAYMSEAVRAAISSVNKGQYEAAFSL 126 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363 G + ++LPQA R +P L + + ++K +SL + A+L VG I +T Sbjct: 127 GYNRYQVFLHIVLPQAFRIALPTLMNYFTTMIKETSLVSVLSIAELTRVGNQIYARTLGP 186 Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395 EI + +Y ++ +AL ++R K +K Sbjct: 187 FEIYITIGAVYFVMTYSVAL-VSRWVEKKGIK 217 >gi|330816746|ref|YP_004360451.1| Amino acid ABC transporter, permease protein [Burkholderia gladioli BSR3] gi|327369139|gb|AEA60495.1| Amino acid ABC transporter, permease protein [Burkholderia gladioli BSR3] Length = 219 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 57/208 (27%), Positives = 104/208 (50%), Gaps = 18/208 (8%) Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249 VF VL +VL+L +R + A+ +Y+S L+ G P LV I + +++ P Sbjct: 29 MVFGLVLAVVLALMGIARNRVLN-----AIARVYVS--LMRGTPLLVQI---FVIYYGLP 78 Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309 LG ++ P + IALS AA+++E +R ++ + GQ A+ +LGL+ + Sbjct: 79 SLG-------ISLDPTPAGV-IALSANVAAYMSESMRGAILGIESGQWLASYSLGLSWGQ 130 Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369 R V+ PQA+R +P L++ ++L+K++SL + +L+ II T Q + + L Sbjct: 131 TLRYVIGPQALRIAVPSLSNSLISLIKDTSLVSVITVTELLRSAQEIIASTYQPLPLYLA 190 Query: 370 WMFIYLSLSIMIALFMNRLNAKIALKEK 397 +Y L ++ ++AL + Sbjct: 191 AAAVYWVLCQVLEWVQRWWERRLALPTR 218 >gi|325478268|gb|EGC81387.1| ABC transporter, permease protein [Anaerococcus prevotii ACS-065-V-Col13] Length = 521 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 36/124 (29%), Positives = 69/124 (55%) Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 +S T A+++E+VR G+ ++ +GQ EA A+GL+ + V+LPQ +R+I+P L ++++ Sbjct: 386 VSINTGAYLSEVVRGGINSIDKGQFEACKAIGLSEAQTMTSVILPQTIRTILPSLGNEFV 445 Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 +K++S+ + +L + ++ T Q LI IY L+ I + L K Sbjct: 446 INIKDTSVLNVISVTELFFMSKSVAGSTYQYFPTYLITAVIYFVLTFTITRILLLLERKF 505 Query: 393 ALKE 396 + K+ Sbjct: 506 SDKD 509 >gi|297160232|gb|ADI09944.1| amino acid ABC transporter permease protein [Streptomyces bingchenggensis BCW-1] Length = 250 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 50/152 (32%), Positives = 77/152 (50%), Gaps = 7/152 (4%) Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299 L + L F P+ QF + P + ++ +AL A+ +EIVR + AV Q EA Sbjct: 65 LMFWLFFVMPLGFQFQLL------PMWAAV-LALGLTYGAYGSEIVRGAIGAVAPAQREA 117 Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359 AIAL T + R V+LPQA+ +IPP + + LLK ++L AV AD+ Sbjct: 118 AIALSFTPAQRMRRVILPQAIPEMIPPFNNLLIELLKATALVSAVSVADITFAAQLSRLA 177 Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 TG ++EI I + +Y L+ ++ M L + Sbjct: 178 TGDSLEIYSIILVLYFVLAFVLTRLMRLLERR 209 >gi|229587874|ref|YP_002869993.1| putative amino acid ABC transporter permease [Pseudomonas fluorescens SBW25] gi|229359740|emb|CAY46589.1| putative amino acid ABC transport system, permease [Pseudomonas fluorescens SBW25] Length = 230 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 37/128 (28%), Positives = 69/128 (53%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + IAL A+ E++R +IA+P+G EA +ALGL+ + +++PQ R +P Sbjct: 96 FAAGVIALGLCYGAYATEVLRGAIIAIPKGHREAGLALGLSKTRIFTRLIMPQMWRIALP 155 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 L + ++ L+K+++L +G +++ + T Q L+ FIYL L+ + + M Sbjct: 156 GLGNLFMILMKDTALVTVIGLEEIMRHAQIAVTVTRQPFTFYLVAAFIYLGLTSLSMVGM 215 Query: 386 NRLNAKIA 393 + L + A Sbjct: 216 HFLEQRAA 223 >gi|207722318|ref|YP_002252754.1| amino acid transmembrane protein [Ralstonia solanacearum MolK2] gi|206587495|emb|CAQ18077.1| amino acid transmembrane protein [Ralstonia solanacearum MolK2] Length = 259 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 37/96 (38%), Positives = 63/96 (65%), Gaps = 1/96 (1%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 PE ++ AL+ AA+IA+ +++GL AV GQ AA+ALG++ +A V+LPQA R + Sbjct: 101 PETATVVTALAAVGAAYIAQSMQAGLRAVGTGQRNAALALGMSPGQALLAVVLPQAWRIM 160 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359 +P + +Q+++ +K++SLA VG +L S + +N Sbjct: 161 LPSVANQWVSTVKDTSLAYIVGVVEL-STAASQVNS 195 >gi|153009566|ref|YP_001370781.1| polar amino acid ABC transporter inner membrane subunit [Ochrobactrum anthropi ATCC 49188] gi|151561454|gb|ABS14952.1| polar amino acid ABC transporter, inner membrane subunit [Ochrobactrum anthropi ATCC 49188] Length = 240 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 38/118 (32%), Positives = 66/118 (55%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +AL +++ +E+ S A+PRGQ E A+GL+H + R V+LPQ +R +P L + Sbjct: 109 VALGFVFSSYSSEVFLSAFRAIPRGQYEGGYAVGLSHWQTMRKVILPQLIRIALPGLANL 168 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388 +L LLK++SL + +D++ T + I +YL L+I+ + F+NR+ Sbjct: 169 WLVLLKDTSLVSVITLSDILRQTSIAARVTKEPFLFFGIACLLYLVLAIISSYFINRI 226 >gi|152979605|ref|YP_001345234.1| polar amino acid ABC transporter, inner membrane subunit [Actinobacillus succinogenes 130Z] gi|150841328|gb|ABR75299.1| polar amino acid ABC transporter, inner membrane subunit [Actinobacillus succinogenes 130Z] Length = 219 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 50/156 (32%), Positives = 87/156 (55%), Gaps = 9/156 (5%) Query: 243 QLHFDKPVLGQ--FNFIGGSTVS---PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQM 297 +L + P+L Q F + G S + F I L+ +++AE R+GL AV +GQ+ Sbjct: 58 ELSRNTPLLIQVFFLYFGLSKIGIRLDGFTCGIIGLAFLGGSYMAEAFRAGLEAVSKGQI 117 Query: 298 EAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII 357 E+A++LGLT ++A R V+ PQA P + + L L+K +S+ A+ A+L+ + II Sbjct: 118 ESALSLGLTPQQAFRYVIFPQAFAISTPAIGANCLFLMKETSVISAIAVAELMFLAKDII 177 Query: 358 N---QTGQAIEIILI-WMFIYLSLSIMIALFMNRLN 389 +T +A+ +++I ++ I L +S+ I RL Sbjct: 178 GMDYKTNEALFLLVIFYLIILLPVSVYIRYLERRLR 213 >gi|296532449|ref|ZP_06895173.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Roseomonas cervicalis ATCC 49957] gi|296267224|gb|EFH13125.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Roseomonas cervicalis ATCC 49957] Length = 222 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 42/152 (27%), Positives = 75/152 (49%), Gaps = 23/152 (15%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 + PLL + F+ FGLP +F G +F S + LS Y Sbjct: 66 RCTPLLLLIFFIYFGLP-------------------EFGIYGMD----KFQSFVLTLSLY 102 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 A+++E+ R+GL ++P+ +EAA A+G+ + V+LP R +P +++ ++L K Sbjct: 103 AGAYMSEVFRAGLASIPKQYVEAAKAIGMRPWQRQVYVVLPVMFRITLPSISNNLISLFK 162 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368 ++SLA A+ +L V + T + +E+ L Sbjct: 163 DTSLAAAIAIPELTFVARQVNANTFRVMEVWL 194 >gi|119383777|ref|YP_914833.1| polar amino acid ABC transporter, inner membrane subunit [Paracoccus denitrificans PD1222] gi|119373544|gb|ABL69137.1| amino acid ABC transporter membrane protein 1, PAAT family [Paracoccus denitrificans PD1222] Length = 221 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 49/151 (32%), Positives = 75/151 (49%), Gaps = 7/151 (4%) Query: 243 QLHFDKPVLGQ--FNFIG----GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296 +L + P L Q F F G G +SP ++++ IAL A ++AEI R GL V Q Sbjct: 62 ELARNTPCLAQIYFFFYGLGAFGIFLSP-WLAVGIALCFNNAGYLAEIFRGGLNGVNANQ 120 Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356 M+ A +LGL A R ++ PQ R+ + +Q++ L N+SL +G DL V Sbjct: 121 MKGARSLGLGPVGAYRYIVFPQVFRNTFSSIGNQFIWALLNTSLGALIGLYDLSGVAMDY 180 Query: 357 INQTGQAIEIILIWMFIYLSLSIMIALFMNR 387 ++T + E L IY L+ ++ NR Sbjct: 181 QSRTFKTFEFFLAIAVIYFILAKLVLFLANR 211 >gi|332076440|gb|EGI86903.1| amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein [Streptococcus pneumoniae GA41301] Length = 219 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 29/73 (39%), Positives = 51/73 (69%) Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 A + +T+A +AEI+R GL AV +GQ EA ++ G T + ++LPQA+R ++P + SQ+ Sbjct: 90 AFTLFTSAALAEIIRGGLNAVDKGQYEAGMSQGFTSAQILYYIILPQAIRKMLPAIISQF 149 Query: 332 LNLLKNSSLAVAV 344 + ++K++SL +V Sbjct: 150 VTVIKDTSLLYSV 162 Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust. Identities = 21/61 (34%), Positives = 36/61 (59%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 I GF T +++ +I +TIIGT++ R N ++ I +Y+E RN+P L+ IF + Sbjct: 16 IFKGFGLTLYISLIAIILSTIIGTVLAVMRNGKNPILRIISSIYIEFVRNVPNLLWIFTI 75 Query: 149 Y 149 + Sbjct: 76 F 76 >gi|312602225|ref|YP_004022070.1| Amino acid ABC transporter permease [Burkholderia rhizoxinica HKI 454] gi|312169539|emb|CBW76551.1| Amino acid ABC transporter permease protein [Burkholderia rhizoxinica HKI 454] Length = 231 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 43/133 (32%), Positives = 71/133 (53%), Gaps = 23/133 (17%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 +A+P+L + + F LP + LH D P GQ + ALS Sbjct: 72 RAIPVLMLMFWTYFLLPVV--------LHIDAP--GQLTVV-------------CALSLI 108 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 A+++ V +G+ AV Q++A ++LG T +A R V+LPQA+R + P +Q+++L+K Sbjct: 109 GGAYLSHAVYAGIRAVGAAQLQAGLSLGFTRMQALRFVVLPQALRIMAPSFINQWVSLIK 168 Query: 337 NSSLAVAVGFADL 349 ++SLA VG +L Sbjct: 169 DTSLAYIVGVPEL 181 >gi|317053174|ref|YP_004119528.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea sp. At-9b] gi|316953501|gb|ADU72972.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea sp. At-9b] Length = 222 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 50/193 (25%), Positives = 101/193 (52%), Gaps = 14/193 (7%) Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247 ++ V +F G+V+++ T + R+ + GK I+ +++F T L+ + Y L F Sbjct: 24 QLAVLAFAFGMVIAMICTSILRYGPKLAGKC-----INAYVVFATNTPQLVQI-YFLFFA 77 Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307 P +G +SP F ++ I + A++ EI R+G +V R ++EAA LG + Sbjct: 78 LPEVGIL-------LSP-FTAVLIGATFNAGAYLCEIQRAGFDSVRRMEIEAAEVLGFSR 129 Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367 + R V+LP ++ + PL++Q++ + +S+A G +L + +QT ++E Sbjct: 130 VQIIRYVILPHVIKVMFRPLSNQFIVMTLGTSMASMFGVEELTGRTYNLSSQTYLSVESF 189 Query: 368 LIWMFIYLSLSIM 380 + IY++++I+ Sbjct: 190 SVAAVIYIAITIV 202 >gi|239627706|ref|ZP_04670737.1| amino acid ABC transporter [Clostridiales bacterium 1_7_47_FAA] gi|239517852|gb|EEQ57718.1| amino acid ABC transporter [Clostridiales bacterium 1_7_47FAA] Length = 267 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 40/134 (29%), Positives = 69/134 (51%), Gaps = 23/134 (17%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 + P++ + F+ FGL L L D + G NFI LS Sbjct: 80 RGTPMMAQAMFIYFGLLPL--------LGIDMSMWGAANFI---------------LSIN 116 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 T A++AE VR G++++ GQ E A ++G+TH + V+LPQA+R+I+P + + + +K Sbjct: 117 TGAYMAETVRGGILSIDPGQTEGAKSIGMTHVQTMIYVILPQALRNIMPQIGNNLIINIK 176 Query: 337 NSSLAVAVGFADLV 350 +S + +G +L+ Sbjct: 177 DSCVLSVIGVTELL 190 >gi|158424110|ref|YP_001525402.1| amino acid ABC transporter permease protein [Azorhizobium caulinodans ORS 571] gi|158330999|dbj|BAF88484.1| amino acid ABC transporter permease protein [Azorhizobium caulinodans ORS 571] Length = 227 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 35/105 (33%), Positives = 64/105 (60%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P F L++ LS AAF E+ +G+++V +GQ EA GLT + R ++LPQA+R Sbjct: 95 PSFAVLWLVLSLVLAAFAEEVFWAGIVSVRKGQWEAGRCTGLTEFQTLRYIVLPQAIRLT 154 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368 +PPLT++ + + KN++L +G ++++ T + +G A +++ Sbjct: 155 VPPLTNRTIAITKNTALGTVIGVPEILNQATTAQSFSGSATPLMM 199 >gi|148983987|ref|ZP_01817306.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP3-BS71] gi|225856306|ref|YP_002737817.1| ABC transporter membrane-spanning permease - glutamine transport [Streptococcus pneumoniae P1031] gi|147924134|gb|EDK75246.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP3-BS71] gi|225724961|gb|ACO20813.1| ABC transporter membrane-spanning permease - glutamine transport [Streptococcus pneumoniae P1031] gi|301799653|emb|CBW32213.1| putative amino acid ABC transporter, permease protein [Streptococcus pneumoniae OXC141] Length = 219 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 29/73 (39%), Positives = 51/73 (69%) Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 A + +T+A +AEI+R GL AV +GQ EA ++ G T + ++LPQA+R ++P + SQ+ Sbjct: 90 AFTLFTSAALAEIIRGGLNAVDKGQYEAGMSQGFTSAQILYYIILPQAIRKMLPAIISQF 149 Query: 332 LNLLKNSSLAVAV 344 + ++K++SL +V Sbjct: 150 VTVIKDTSLLYSV 162 Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust. Identities = 21/61 (34%), Positives = 36/61 (59%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 I GF T +++ +I +TIIGT++ R N ++ I +Y+E RN+P L+ IF + Sbjct: 16 IFKGFGLTLYISLIAIILSTIIGTVLAVMRNGKNPILRIISSIYIEFVRNVPNLLWIFTI 75 Query: 149 Y 149 + Sbjct: 76 F 76 >gi|15596086|ref|NP_249580.1| arginine/ornithine transport protein AotQ [Pseudomonas aeruginosa PAO1] gi|107100347|ref|ZP_01364265.1| hypothetical protein PaerPA_01001372 [Pseudomonas aeruginosa PACS2] gi|116048813|ref|YP_792387.1| arginine/ornithine transport protein AotQ [Pseudomonas aeruginosa UCBPP-PA14] gi|218893142|ref|YP_002442011.1| arginine/ornithine transport protein AotQ [Pseudomonas aeruginosa LESB58] gi|254239242|ref|ZP_04932565.1| arginine/ornithine transport protein AotQ [Pseudomonas aeruginosa C3719] gi|254245176|ref|ZP_04938498.1| arginine/ornithine transport protein AotQ [Pseudomonas aeruginosa 2192] gi|296390757|ref|ZP_06880232.1| arginine/ornithine transport protein AotQ [Pseudomonas aeruginosa PAb1] gi|313105772|ref|ZP_07792035.1| arginine/ornithine transport protein AotQ [Pseudomonas aeruginosa 39016] gi|9946789|gb|AAG04278.1|AE004523_6 arginine/ornithine transport protein AotQ [Pseudomonas aeruginosa PAO1] gi|115584034|gb|ABJ10049.1| arginine/ornithine transport protein AotQ [Pseudomonas aeruginosa UCBPP-PA14] gi|126171173|gb|EAZ56684.1| arginine/ornithine transport protein AotQ [Pseudomonas aeruginosa C3719] gi|126198554|gb|EAZ62617.1| arginine/ornithine transport protein AotQ [Pseudomonas aeruginosa 2192] gi|218773370|emb|CAW29182.1| arginine/ornithine transport protein AotQ [Pseudomonas aeruginosa LESB58] gi|310878537|gb|EFQ37131.1| arginine/ornithine transport protein AotQ [Pseudomonas aeruginosa 39016] Length = 229 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 42/125 (33%), Positives = 70/125 (56%), Gaps = 9/125 (7%) Query: 231 GLPTLVLIALKYQ-----LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285 G+P LVLI L + L++ P LG ++I ++P F+S L A+++E Sbjct: 58 GIPDLVLILLIFYGGQGLLNWVAPQLGYDDYI---DLNP-FVSGVGTLGFIFGAYLSETF 113 Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345 R +A+P+GQ EA A G++HR+ + +PQ +R IP T+ +L L+K ++L VG Sbjct: 114 RGAFMAIPKGQGEAGYAYGMSHRQVFFRIQVPQMIRLAIPGFTNNWLVLVKATALISVVG 173 Query: 346 FADLV 350 D++ Sbjct: 174 LQDMM 178 >gi|260891036|ref|ZP_05902299.1| polar amino acid uptake family ABC transporter, permease protein [Leptotrichia hofstadii F0254] gi|260859063|gb|EEX73563.1| polar amino acid uptake family ABC transporter, permease protein [Leptotrichia hofstadii F0254] Length = 237 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 50/178 (28%), Positives = 93/178 (52%), Gaps = 15/178 (8%) Query: 217 KALPLLYISTFLIFGLPTLV-LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSC 275 + PLL +GLP ++ I LKY + D N I P + +Y+A Sbjct: 68 RGTPLLVQIYLAYYGLPKILDYIHLKYGFNID------VNNI------PAIVFVYVAFIL 115 Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335 + +++E R+ + +V +GQ+EAA+++G+T +A R ++LPQA+ P + +++L+ Sbjct: 116 NVSGYLSETFRAAIQSVDKGQVEAALSIGMTKWQAMRRIVLPQAIIITFPNFGNTFISLI 175 Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAI-EIILIWMFIYLSLSIMIALFMNRLNAKI 392 K+SSLA V +++ II+ +G I E ++ IY + I++ M + K+ Sbjct: 176 KDSSLAFTVSIVEMMG-KAKIISASGLDIFEAYIVVAGIYWVVCIIVEKVMGIVEKKL 232 >gi|149010775|ref|ZP_01832146.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP19-BS75] gi|147765256|gb|EDK72185.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP19-BS75] Length = 219 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 29/73 (39%), Positives = 51/73 (69%) Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 A + +T+A +AEI+R GL AV +GQ EA ++ G T + ++LPQA+R ++P + SQ+ Sbjct: 90 AFTLFTSAALAEIIRGGLNAVDKGQYEAGMSQGFTSAQILYYIILPQAIRKMLPAIISQF 149 Query: 332 LNLLKNSSLAVAV 344 + ++K++SL +V Sbjct: 150 VTVIKDTSLLYSV 162 Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust. Identities = 21/61 (34%), Positives = 36/61 (59%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 I GF T +++ +I +TIIGT++ R N ++ I +Y+E RN+P L+ IF + Sbjct: 16 IFKGFGLTLYISLIAIILSTIIGTVLAVMRNGKNPILRIISSIYIEFVRNVPNLLWIFTI 75 Query: 149 Y 149 + Sbjct: 76 F 76 >gi|13488462|ref|NP_109469.1| ABC transporter [Mesorhizobium loti MAFF303099] gi|14028216|dbj|BAB54808.1| ABC transporter [Mesorhizobium loti MAFF303099] Length = 219 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 47/185 (25%), Positives = 97/185 (52%), Gaps = 9/185 (4%) Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273 + G P L + FLI + + ++A Y L+F P G +G TV + L Sbjct: 44 RRGGGAPGLAVR-FLIDFIRSTPVLAWLYFLYFVMPFYGIR--LGAMTVG------VMGL 94 Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333 S Y + ++AE+ ++G+ A+P+GQ EAA AL L+ R V+ PQ +R++ PL + ++ Sbjct: 95 SLYYSGYLAEVFKAGIDAIPKGQQEAARALSLSRRDTVVFVIAPQMLRNVAAPLGNYVVS 154 Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393 +LK + + +++ I ++T + E + + ++L+L++++A + R+ ++ Sbjct: 155 ILKATPYLAILAVPEMLGRAFDIASETYRYAEPLTVAGILFLALALIVAYGVKRIEQRLL 214 Query: 394 LKEKK 398 ++ Sbjct: 215 ASGRR 219 >gi|227522632|ref|ZP_03952681.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus hilgardii ATCC 8290] gi|227090212|gb|EEI25524.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus hilgardii ATCC 8290] Length = 204 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 60/194 (30%), Positives = 93/194 (47%), Gaps = 36/194 (18%) Query: 193 SFVLGIVLSLFAT--RLSR----HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246 SF+ ++L LF T ++SR H+ + +IS + G+P LVL+ + Y Sbjct: 23 SFIGALILGLFLTLAQMSRFKLLHWSARA-------FIS--FMRGVPMLVLLFIIY---- 69 Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306 F F G+ P + IA + +AF++E+ RS AV RGQ EAA +LGL Sbjct: 70 -------FGF--GANALP---AAVIAFTINCSAFVSEVFRSSFSAVDRGQWEAAYSLGLP 117 Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 +R V+ PQA R IP L + L+L K++SLA + +++ I + I Sbjct: 118 YRTVIAKVIFPQAFRIAIPALGNILLDLFKSTSLAAMITVSEMFMDAKIIAGAYQDYMSI 177 Query: 367 -----ILIWMFIYL 375 I+ W F +L Sbjct: 178 YIVMAIIYWFFCWL 191 Score = 37.7 bits (86), Expect = 3.3, Method: Compositional matrix adjust. Identities = 20/61 (32%), Positives = 33/61 (54%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 IL GF + +L I A I+G + ++S KL+ W R ++ R +P LV++F + Sbjct: 9 ILAGFPMSLYLTAISFIGALILGLFLTLAQMSRFKLLHWSARAFISFMRGVPMLVLLFII 68 Query: 149 Y 149 Y Sbjct: 69 Y 69 >gi|15900515|ref|NP_345119.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae TIGR4] gi|111656912|ref|ZP_01407736.1| hypothetical protein SpneT_02001839 [Streptococcus pneumoniae TIGR4] gi|14972082|gb|AAK74759.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae TIGR4] Length = 219 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 29/73 (39%), Positives = 51/73 (69%) Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 A + +T+A +AEI+R GL AV +GQ EA ++ G T + ++LPQA+R ++P + SQ+ Sbjct: 90 AFTLFTSAALAEIIRGGLNAVDKGQYEAGMSQGFTSAQILYYIILPQAIRKMLPAIISQF 149 Query: 332 LNLLKNSSLAVAV 344 + ++K++SL +V Sbjct: 150 VTVIKDTSLLYSV 162 Score = 39.3 bits (90), Expect = 0.98, Method: Compositional matrix adjust. Identities = 21/61 (34%), Positives = 36/61 (59%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 I GF T +++ +I +TIIGT++ R N ++ I +Y+E RN+P L+ IF + Sbjct: 16 IFKGFGLTLYISLIAIILSTIIGTVLAVTRNGKNPVLRIISSIYIEFVRNVPNLLWIFTI 75 Query: 149 Y 149 + Sbjct: 76 F 76 >gi|15902576|ref|NP_358126.1| amino acid ABC transporter permease [Streptococcus pneumoniae R6] gi|116516319|ref|YP_816030.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae D39] gi|182683538|ref|YP_001835285.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae CGSP14] gi|303253932|ref|ZP_07340053.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae BS455] gi|15458107|gb|AAK99336.1| ABC transporter membrane-spanning permease - glutamine transport [Streptococcus pneumoniae R6] gi|116076895|gb|ABJ54615.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae D39] gi|182628872|gb|ACB89820.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae CGSP14] gi|301801476|emb|CBW34168.1| putative amino acid ABC transporter, permease protein [Streptococcus pneumoniae INV200] gi|302599108|gb|EFL66133.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae BS455] Length = 219 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 29/73 (39%), Positives = 51/73 (69%) Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 A + +T+A +AEI+R GL AV +GQ EA ++ G T + ++LPQA+R ++P + SQ+ Sbjct: 90 AFTLFTSAALAEIIRGGLNAVDKGQYEAGMSQGFTSAQILYYIILPQAIRKMLPAIISQF 149 Query: 332 LNLLKNSSLAVAV 344 + ++K++SL +V Sbjct: 150 VTVIKDTSLLYSV 162 Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust. Identities = 21/61 (34%), Positives = 36/61 (59%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 I GF T +++ +I +TIIGT++ R N ++ I +Y+E RN+P L+ IF + Sbjct: 16 IFKGFGLTLYISLIAIILSTIIGTVLAVMRNGKNPILRIISSIYIEFVRNVPNLLWIFTI 75 Query: 149 Y 149 + Sbjct: 76 F 76 >gi|213691607|ref|YP_002322193.1| polar amino acid ABC transporter, inner membrane subunit [Bifidobacterium longum subsp. infantis ATCC 15697] gi|213523068|gb|ACJ51815.1| polar amino acid ABC transporter, inner membrane subunit [Bifidobacterium longum subsp. infantis ATCC 15697] gi|320457694|dbj|BAJ68315.1| glutamate ABC transporter permease component [Bifidobacterium longum subsp. infantis ATCC 15697] Length = 225 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 50/127 (39%), Positives = 72/127 (56%), Gaps = 2/127 (1%) Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 LS YTAAF+ E +RSG+ VP GQ EAA ALGL ++ ++LPQA R + PL + Sbjct: 99 GLSLYTAAFVCESLRSGINTVPIGQAEAARALGLGFMQSATEIILPQAFRGSVAPLGNTL 158 Query: 332 LNLLKNSSLAVAVGFADLVS--VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 + LLKNS++A A A S + I + I+I LI+ Y+ L I I + L+ Sbjct: 159 IALLKNSTVAAAASVATETSSLMSEMIEFRPDVIIQIFLIFALGYVILIIPIGMLTTYLS 218 Query: 390 AKIALKE 396 K+A++ Sbjct: 219 NKLAVRR 225 >gi|260438223|ref|ZP_05792039.1| amino acid ABC transporter, permease protein [Butyrivibrio crossotus DSM 2876] gi|292809415|gb|EFF68620.1| amino acid ABC transporter, permease protein [Butyrivibrio crossotus DSM 2876] Length = 228 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 54/186 (29%), Positives = 91/186 (48%), Gaps = 19/186 (10%) Query: 177 SFPTLTMDTNA------KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS---TF 227 FP + N K+F+ + + I L L T S T K PL YI+ + Sbjct: 7 QFPVVVKALNTGFLQTLKLFIVTLIGAIPLGLIITFGS------TSKFPPLKYITKIFVW 60 Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287 +I G P ++I L +F VL N + G S FM+ +A A + +EI R Sbjct: 61 IIRGTP--LMIQLLIIFYFPGLVLN--NPVWGGGESGRFMAAAVAFIINYACYFSEIYRG 116 Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347 G+ ++P GQ EA + LG+ + V L Q ++ I+PP++++ + L+K++SLA + Sbjct: 117 GIESIPVGQDEAGLVLGMKKSQIFFKVKLKQMIKRIVPPMSNEIITLVKDTSLARIIALQ 176 Query: 348 DLVSVG 353 +++ G Sbjct: 177 EIIWAG 182 >gi|258620247|ref|ZP_05715286.1| arginine ABC transporter, permease protein [Vibrio mimicus VM573] gi|262164884|ref|ZP_06032622.1| arginine ABC transporter permease protein ArtQ [Vibrio mimicus VM223] gi|258587605|gb|EEW12315.1| arginine ABC transporter, permease protein [Vibrio mimicus VM573] gi|262027264|gb|EEY45931.1| arginine ABC transporter permease protein ArtQ [Vibrio mimicus VM223] Length = 229 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 39/89 (43%), Positives = 58/89 (65%), Gaps = 1/89 (1%) Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321 +SP F+S IALS A++ ++ +R L AV RGQ EAA ALG+ A ++LPQA+R Sbjct: 87 ISP-FISGVIALSLIFASYASQTLRGALKAVGRGQREAASALGIPPAHAFFRIVLPQAVR 145 Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 +P L +Q+L LLK+++L +G DL+ Sbjct: 146 HALPGLMNQWLVLLKDTALVSLIGVTDLL 174 >gi|194397718|ref|YP_002037266.1| ABC transporter permease [Streptococcus pneumoniae G54] gi|194357385|gb|ACF55833.1| ABC transporter, permease protein [Streptococcus pneumoniae G54] Length = 219 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 29/73 (39%), Positives = 51/73 (69%) Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 A + +T+A +AEI+R GL AV +GQ EA ++ G T + ++LPQA+R ++P + SQ+ Sbjct: 90 AFTLFTSAALAEIIRGGLNAVDKGQYEAGMSQGFTSAQILYYIILPQAIRKMLPAIISQF 149 Query: 332 LNLLKNSSLAVAV 344 + ++K++SL +V Sbjct: 150 VTVIKDTSLLYSV 162 Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust. Identities = 21/61 (34%), Positives = 36/61 (59%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 I GF T +++ +I +TIIGT++ R N ++ I +Y+E RN+P L+ IF + Sbjct: 16 IFKGFGLTLYISLIAIILSTIIGTVLAVMRNGKNPVLRIISSIYIEFVRNVPNLLWIFTI 75 Query: 149 Y 149 + Sbjct: 76 F 76 >gi|167720786|ref|ZP_02404022.1| polar amino acid uptake ABC transporter, PAAT family, permease protein [Burkholderia pseudomallei DM98] Length = 208 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 56/200 (28%), Positives = 101/200 (50%), Gaps = 14/200 (7%) Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247 K V S VLG+++ L L R + A+ Y+S L+ G P LV + + +++ Sbjct: 23 KFAVASMVLGLIVGLLVA-LVRIGSNRLLSAIAQGYVS--LMRGTPLLVQM---FVVYYG 76 Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307 P +G ++ P ++ L+ A+++E +R ++ + RGQ A+ +LGLTH Sbjct: 77 LPDIG-------ISLDPTAAGIF-TLTLNAGAYLSESMRGAILGIGRGQWAASHSLGLTH 128 Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367 + R V+ PQA+R +P L + ++L+K++SL + +L+ +I T Q + + Sbjct: 129 VQTLRHVICPQALRLAVPSLGNTLISLIKDTSLVSVITVTELLRSTQEVIASTFQPLPLY 188 Query: 368 LIWMFIYLSLSIMIALFMNR 387 L IY LS ++A R Sbjct: 189 LAAAAIYWVLSTLLARLQGR 208 Score = 37.7 bits (86), Expect = 3.3, Method: Compositional matrix adjust. Identities = 28/96 (29%), Positives = 45/96 (46%), Gaps = 12/96 (12%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151 G T A + M+ I+G LV R+ +N+L++ I + YV + R P LV +F +Y Sbjct: 17 GAALTMKFAVASMVLGLIVGLLVALVRIGSNRLLSAIAQGYVSLMRGTPLLVQMFVVYYG 76 Query: 152 VLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187 +PD G+ L+ TLT++ A Sbjct: 77 ------LPD------IGISLDPTAAGIFTLTLNAGA 100 >gi|300921107|ref|ZP_07137491.1| ABC transporter, permease protein [Escherichia coli MS 115-1] gi|300411958|gb|EFJ95268.1| ABC transporter, permease protein [Escherichia coli MS 115-1] Length = 238 Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 55/186 (29%), Positives = 95/186 (51%), Gaps = 8/186 (4%) Query: 217 KALPLLYISTFLIFGLPTLVLI---ALKYQLHFDK-PVLGQFNFIGGSTVSPEFMSLYIA 272 + LP + + F+ FG L+L L F + PV Q + I VSP F+ IA Sbjct: 55 RGLPEILVVLFIYFGSSQLLLTLSDGFTINLGFVQIPV--QMD-IENFDVSP-FLCGVIA 110 Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 LS AA+ ++ +R L AVP GQ E+ ALGL+ +++PQ R +P L +Q+L Sbjct: 111 LSLLYAAYASQTLRGALKAVPVGQWESGQALGLSKSAIFFRLVMPQMWRHALPGLGNQWL 170 Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 LLK+++L + DL+ +I +T + ++ IYL ++++ + R++ + Sbjct: 171 VLLKDTALVSLISVNDLMLQTKSIATRTQEPFTWYIVAAAIYLVITLLSQYILKRIDLRA 230 Query: 393 ALKEKK 398 E++ Sbjct: 231 TRFERR 236 >gi|292487348|ref|YP_003530220.1| putative ABC transporter inner membrane protein [Erwinia amylovora CFBP1430] gi|292898593|ref|YP_003537962.1| ABC transporter permease [Erwinia amylovora ATCC 49946] gi|291198441|emb|CBJ45549.1| ABC transporter, permease protein [Erwinia amylovora ATCC 49946] gi|291552767|emb|CBA19812.1| putative ABC transport system, inner membrane component [Erwinia amylovora CFBP1430] gi|312171454|emb|CBX79712.1| putative ABC transport system, inner membrane component [Erwinia amylovora ATCC BAA-2158] Length = 218 Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 38/108 (35%), Positives = 62/108 (57%), Gaps = 1/108 (0%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G +SP + + +AL+CYT+AF+ +I + A+P+GQ EA LGL + V+LPQ Sbjct: 80 GLDLSP-WAAAALALTCYTSAFLLDIWYGSIKALPKGQWEACRCLGLGIGQTLFRVVLPQ 138 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 A+R I P + ++K ++LA +GF +L G + N T Q ++ Sbjct: 139 ALRIGIAPTVGFAVQVVKGTALASIIGFIELTKAGTILNNVTYQPFKV 186 >gi|87309629|ref|ZP_01091763.1| amino acid ABC transporter, permease protein [Blastopirellula marina DSM 3645] gi|87287393|gb|EAQ79293.1| amino acid ABC transporter, permease protein [Blastopirellula marina DSM 3645] Length = 219 Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 42/124 (33%), Positives = 70/124 (56%), Gaps = 4/124 (3%) Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333 SCYTA E+ R+GL VP+GQ AA AL LT + R V+LPQA+ I+P L + + Sbjct: 100 SCYTA----EVYRAGLNGVPQGQWIAAKALNLTTWQTYRHVVLPQAIPPILPALGNYLIA 155 Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393 + K++ L A+ D++ + NQ+ + E + I I+L+LSI+ + ++ L ++ Sbjct: 156 MFKDAPLLSAITVLDVLQRAKIVGNQSFRYQEPLTIVGIIFLTLSILSGVGVSWLKRRVE 215 Query: 394 LKEK 397 + Sbjct: 216 ASQS 219 >gi|328957173|ref|YP_004374559.1| putative amino acid ABC transporter, membrane-spanning subunit [Carnobacterium sp. 17-4] gi|328673497|gb|AEB29543.1| putative amino acid ABC transporter, membrane-spanning subunit [Carnobacterium sp. 17-4] Length = 211 Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 35/114 (30%), Positives = 64/114 (56%), Gaps = 1/114 (0%) Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 AA+ AEI R G++++P+GQ EA LG+ R +++PQ MR ++P + ++ + L+K+ Sbjct: 96 AAYYAEIFRGGILSIPKGQFEAIRVLGIGKINGFRKIIIPQVMRVVLPSVGNEVIALVKD 155 Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 +SL +G +L+ G N I + IYL ++ ++ L +N + K Sbjct: 156 TSLIYILGIGELLRAGQIAANTYASLIPYAAVGA-IYLVVTGLVTLLLNAIEKK 208 >gi|310640486|ref|YP_003945244.1| amino acid abc transporter, permease protein [Paenibacillus polymyxa SC2] gi|309245436|gb|ADO55003.1| Amino acid ABC transporter, permease protein [Paenibacillus polymyxa SC2] Length = 219 Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 38/143 (26%), Positives = 79/143 (55%), Gaps = 7/143 (4%) Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308 PV+G++ + +T + +A AA+ AEI R G++++ +GQ EA+ LGL+ Sbjct: 80 PVIGEYLVLDRTTAA------VLAFVLNYAAYFAEIFRGGMLSIDKGQYEASQVLGLSKS 133 Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368 + V++PQ +R +P +T++ L+K+++L AV +L+ T +N+ + + Sbjct: 134 QTLIRVIVPQMVRIALPAVTNEATTLVKDTALLYAVAVPELLHFANTAVNRDFSIVPYV- 192 Query: 369 IWMFIYLSLSIMIALFMNRLNAK 391 + IYL +++++ +F L + Sbjct: 193 VAAVIYLLMALVLTIFFRALEKR 215 >gi|167569999|ref|ZP_02362873.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Burkholderia oklahomensis C6786] Length = 247 Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 35/96 (36%), Positives = 58/96 (60%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P ++ ALS A++A V +G+ A GQ +A ++LGLT + R VLLPQA++ + Sbjct: 94 PGLAAVVCALSLVGGAYLAHSVHAGIRAAGAGQWQAGLSLGLTRWQTVRYVLLPQAVKIM 153 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359 P +Q+++L+K++SLA VG +L V + N+ Sbjct: 154 TPSFVNQWVSLVKDTSLAYIVGVPELSFVATQVNNR 189 >gi|160937964|ref|ZP_02085322.1| hypothetical protein CLOBOL_02858 [Clostridium bolteae ATCC BAA-613] gi|158439190|gb|EDP16944.1| hypothetical protein CLOBOL_02858 [Clostridium bolteae ATCC BAA-613] Length = 267 Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 38/126 (30%), Positives = 71/126 (56%), Gaps = 6/126 (4%) Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329 Y LS T A++AE VR G++++ GQ E A A+G+TH + V+LPQA+R+I+P + + Sbjct: 110 YFILSINTGAYMAETVRGGILSIDPGQTEGAKAIGMTHVQTMLYVILPQALRNIMPQIGN 169 Query: 330 QYLNLLKNSSLAVAVGFADLV-----SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 + +K+S + +G +L+ + G +N I +I I+ + + S ++ + Sbjct: 170 NLIINIKDSCVLSVIGVTELLYKTKAAAGALYMNFEAYTITMI-IYFIMTFTCSRILRWW 228 Query: 385 MNRLNA 390 NR++ Sbjct: 229 ENRMDG 234 >gi|46190371|ref|ZP_00121566.2| COG0765: ABC-type amino acid transport system, permease component [Bifidobacterium longum DJO10A] gi|189438886|ref|YP_001953967.1| amino acid ABC transporter permease [Bifidobacterium longum DJO10A] gi|189427321|gb|ACD97469.1| ABC-type amino acid transport system permease component [Bifidobacterium longum DJO10A] Length = 366 Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 31/89 (34%), Positives = 59/89 (66%) Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322 SP + ++ +AL Y + +AE+VRSG+ +P GQ EA++ALGLT ++ + +PQA+ + Sbjct: 141 SPSYWAVVLALVLYNGSVVAELVRSGVGNLPGGQREASLALGLTETQSLMEIEVPQAVYA 200 Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 ++P +Q + +LK+++L + + DL+ Sbjct: 201 MLPAAVTQLVVVLKDTALGSIIMYTDLLQ 229 >gi|260441513|ref|ZP_05795329.1| Putative ABC transporter, permease protein, amino acid [Neisseria gonorrhoeae DGI2] gi|291044876|ref|ZP_06570585.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2] gi|291011770|gb|EFE03766.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2] Length = 219 Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 52/181 (28%), Positives = 91/181 (50%), Gaps = 16/181 (8%) Query: 228 LIFGLPTLVLIALKY-----------QLHFDKPVLGQ--FNFIGGSTVSPE---FMSLYI 271 L+FGLP V+ A + +L + P+L Q F + G + + F I Sbjct: 32 LLFGLPVAVVTAYRIRPFYALARAYIELSRNTPLLIQLFFLYYGLPKMGIKWDGFTCGVI 91 Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 AL A+++AE VR+ ++AVP+GQ+ A A+GL+ + R V LPQ +P + + Sbjct: 92 ALVFLGASYMAEAVRADILAVPKGQVGAGKAIGLSRFQVFRYVELPQVWAVAVPAIGANI 151 Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 L L+K +S+ VG A+L+ V +I + E + + YL + + ++L R+ + Sbjct: 152 LFLMKETSVVSTVGIAELLFVTKDVIGMDYKTNEALFLLFAAYLIILLPVSLLARRIENR 211 Query: 392 I 392 + Sbjct: 212 V 212 >gi|187732498|ref|YP_001880941.1| arginine transporter permease subunit ArtQ [Shigella boydii CDC 3083-94] gi|187429490|gb|ACD08764.1| arginine ABC transporter, permease protein ArtQ [Shigella boydii CDC 3083-94] gi|320175302|gb|EFW50408.1| Arginine ABC transporter, permease protein ArtQ [Shigella dysenteriae CDC 74-1112] gi|320183198|gb|EFW58056.1| Arginine ABC transporter, permease protein ArtQ [Shigella flexneri CDC 796-83] gi|332097215|gb|EGJ02198.1| arginine transport system permease protein artQ [Shigella boydii 3594-74] Length = 238 Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 55/186 (29%), Positives = 95/186 (51%), Gaps = 8/186 (4%) Query: 217 KALPLLYISTFLIFGLPTLVLI---ALKYQLHFDK-PVLGQFNFIGGSTVSPEFMSLYIA 272 + LP + + F+ FG L+L L F + PV Q + I VSP F+ IA Sbjct: 55 RGLPEILVVLFIYFGSSQLLLTLSDGFTINLGFVQIPV--QMD-IENFDVSP-FLCGVIA 110 Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 LS AA+ ++ +R L AVP GQ E+ ALGL+ +++PQ R +P L +Q+L Sbjct: 111 LSLLYAAYASQTLRGALKAVPVGQWESGQALGLSKSAIFFRLVMPQMWRHALPGLGNQWL 170 Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 LLK+++L + DL+ +I +T + ++ IYL ++++ + R++ + Sbjct: 171 VLLKDTALVSLISVNDLMLQTKSIATRTQEPFTWYIVAAAIYLVITLLSQYILKRIDLRA 230 Query: 393 ALKEKK 398 E++ Sbjct: 231 TRFERR 236 >gi|77465462|ref|YP_354965.1| ABC polar amino acid transporter, inner membrane subunit [Rhodobacter sphaeroides 2.4.1] gi|77389880|gb|ABA81064.1| ABC polar amino acid transporter, inner membrane subunit [Rhodobacter sphaeroides 2.4.1] Length = 221 Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 38/93 (40%), Positives = 59/93 (63%), Gaps = 1/93 (1%) Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317 G +SP F ++ +A +A+ AEI R+G+ +VP GQ EAA A GLT + V+LP Sbjct: 87 AGLAISP-FAAVAVAFFLNNSAYYAEIYRAGIQSVPAGQTEAARACGLTTGQTLAHVVLP 145 Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 QA+R+++P L S + ++K +SLA V A+L+ Sbjct: 146 QAVRNVLPDLLSNTVEVVKLTSLASVVSLAELL 178 >gi|226330764|ref|ZP_03806282.1| hypothetical protein PROPEN_04684 [Proteus penneri ATCC 35198] gi|225201559|gb|EEG83913.1| hypothetical protein PROPEN_04684 [Proteus penneri ATCC 35198] Length = 234 Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 62/226 (27%), Positives = 104/226 (46%), Gaps = 18/226 (7%) Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS-TFLIFGLPTLVLIALKY- 242 T + + + ++G+VL++ T + KA L LI GLP ++++ Y Sbjct: 13 TTVTLAISALIIGLVLAMLFT----AWESARWKAFAFLGTCWVTLIRGLPEMLVVLFVYY 68 Query: 243 ------QLHFDKPVLG----QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292 + D LG Q +F G T S F IALS A++ ++ +R L AV Sbjct: 69 GTLQGVMMLMDGIDLGAFTLQIDF--GDTESLPFYCGVIALSLLYASYASQTLRGALKAV 126 Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352 P GQ EA ALG+ ++PQ R +P L +Q+L LLK+++L + DL+ Sbjct: 127 PTGQWEAGQALGMGRITIFFRFIMPQMWRHALPGLGNQWLVLLKDTALVSLISVNDLMLQ 186 Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 +I N+T + I IYL+++++ + L + E+ Sbjct: 187 TQSIANRTQEPFTWYSIVALIYLAITLVSQYILKWLEMRTTRFERS 232 >gi|312970986|ref|ZP_07785165.1| arginine transport system permease protein artQ [Escherichia coli 1827-70] gi|310336747|gb|EFQ01914.1| arginine transport system permease protein artQ [Escherichia coli 1827-70] gi|323172171|gb|EFZ57809.1| arginine transport system permease protein artQ [Escherichia coli LT-68] gi|324116076|gb|EGC10000.1| inner membrane transport system [Escherichia coli E1167] Length = 226 Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 55/186 (29%), Positives = 95/186 (51%), Gaps = 8/186 (4%) Query: 217 KALPLLYISTFLIFGLPTLVLI---ALKYQLHFDK-PVLGQFNFIGGSTVSPEFMSLYIA 272 + LP + + F+ FG L+L L F + PV Q + I VSP F+ IA Sbjct: 43 RGLPEILVVLFIYFGSSQLLLTLSDGFTINLGFVQIPV--QMD-IENFDVSP-FLCGVIA 98 Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 LS AA+ ++ +R L AVP GQ E+ ALGL+ +++PQ R +P L +Q+L Sbjct: 99 LSLLYAAYASQTLRGALKAVPVGQWESGQALGLSKSAIFFRLVMPQMWRHALPGLGNQWL 158 Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 LLK+++L + DL+ +I +T + ++ IYL ++++ + R++ + Sbjct: 159 VLLKDTALVSLISVNDLMLQTKSIATRTQEPFTWYIVAAAIYLVITLLSQYILKRIDLRA 218 Query: 393 ALKEKK 398 E++ Sbjct: 219 TRFERR 224 >gi|326382188|ref|ZP_08203880.1| ABC transporter permease protein [Gordonia neofelifaecis NRRL B-59395] gi|326198918|gb|EGD56100.1| ABC transporter permease protein [Gordonia neofelifaecis NRRL B-59395] Length = 243 Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 43/133 (32%), Positives = 70/133 (52%), Gaps = 1/133 (0%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G + P F + +AL A+ AE+VR L AVP Q+EAA+AL + R+ V+ PQ Sbjct: 82 GYQLDPVFCGI-LALGLNYGAYGAEVVRGALTAVPAAQVEAAVALNFSARQRLTRVVFPQ 140 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378 A +IP L + ++LLK ++ A + DL + + TG + + + IYL L+ Sbjct: 141 AWAMMIPSLGNLLIHLLKGTAFASFITLQDLTAGIVDLQKTTGDTLFSFGVGLVIYLILA 200 Query: 379 IMIALFMNRLNAK 391 ++ L +N A+ Sbjct: 201 YLVTLLINLAEAR 213 >gi|294679056|ref|YP_003579666.1| polar amino acid ABC transporter permease [Rhodobacter capsulatus SB 1003] gi|294477872|gb|ADE87259.1| polar amino acid ABC transporter, permease protein [Rhodobacter capsulatus SB 1003] Length = 243 Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 39/95 (41%), Positives = 53/95 (55%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F S A+S + A A+I+R+GL +V GQ E A A G + K L+ LPQAM IIP Sbjct: 84 FWSCCAAISIWGGANGAQILRAGLTSVSAGQRETAAAFGFSPLKGLLLITLPQAMPVIIP 143 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 P S L++ +SL VG +L+ G +I QT Sbjct: 144 PYVSLLTALVQATSLGAVVGAQELLRSGQVVIEQT 178 >gi|221199371|ref|ZP_03572415.1| histidine ABC transporter, permease protein HisQ [Burkholderia multivorans CGD2M] gi|221205727|ref|ZP_03578742.1| histidine ABC transporter, permease protein HisQ [Burkholderia multivorans CGD2] gi|221211584|ref|ZP_03584563.1| histidine ABC transporter, permease protein HisQ [Burkholderia multivorans CGD1] gi|221168945|gb|EEE01413.1| histidine ABC transporter, permease protein HisQ [Burkholderia multivorans CGD1] gi|221174565|gb|EEE06997.1| histidine ABC transporter, permease protein HisQ [Burkholderia multivorans CGD2] gi|221180656|gb|EEE13059.1| histidine ABC transporter, permease protein HisQ [Burkholderia multivorans CGD2M] Length = 229 Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 49/164 (29%), Positives = 86/164 (52%), Gaps = 17/164 (10%) Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLI-----ALKYQLHFD 247 SF+LG+V + A +LSR+ + + +Y T LI G+P LVL+ +++ L+ Sbjct: 28 SFLLGLVGA--AAKLSRN---RIANGVGTVY--TTLIRGVPDLVLMLLLFYSIQIWLNMA 80 Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307 LG + P F++ + L A+ E R ++VPRGQ+EA A G+T+ Sbjct: 81 TDALGWDQI----DIDP-FLAGVLVLGFIYGAYFTETFRGAFLSVPRGQLEAGSAYGMTN 135 Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 + ++ PQ MR +P + + + L+K+++L +G AD+V Sbjct: 136 WQVFTRIMFPQMMRFALPGIGNNWQVLVKSTALVSIIGLADVVK 179 >gi|78355232|ref|YP_386681.1| amino acid ABC transporter permease [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78217637|gb|ABB36986.1| amino acid ABC transporter membrane protein 1, PAAT family [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 222 Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 41/119 (34%), Positives = 72/119 (60%), Gaps = 10/119 (8%) Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290 G+P LVL+ L Y G F +G + + +L + ++ +AA+ ++I R + Sbjct: 64 GVPILVLMFLFY--------FGVFELLGLNLSAISATALVLGMT--SAAYQSQIFRGSIQ 113 Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349 A+P GQ++AA A+G++ +A R V+LPQA+R +P +++Y +LK+S+LA VG D+ Sbjct: 114 ALPAGQLKAARAMGMSDSQAIRAVILPQALRLSLPGWSNEYSIILKDSALAYVVGAMDI 172 >gi|330882783|gb|EGH16932.1| amino acid ABC transporter permease [Pseudomonas syringae pv. glycinea str. race 4] Length = 217 Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 39/103 (37%), Positives = 57/103 (55%), Gaps = 3/103 (2%) Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 +A+ AEI+RS LI V +GQ +A AL A R ++LPQA+ +IPP+ +Q + LLK Sbjct: 103 SAYGAEIIRSALINVSQGQRDAVRALDFGPISAFRRIILPQALPFMIPPMGNQLVELLKT 162 Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380 +SL + DL G +I GQ LIW + + +M Sbjct: 163 TSLVSLITLTDLTFTGSQLITTLGQQ---TLIWSIVLVCYFVM 202 >gi|307323373|ref|ZP_07602583.1| polar amino acid ABC transporter, inner membrane subunit [Streptomyces violaceusniger Tu 4113] gi|306890862|gb|EFN21838.1| polar amino acid ABC transporter, inner membrane subunit [Streptomyces violaceusniger Tu 4113] Length = 334 Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 63/218 (28%), Positives = 111/218 (50%), Gaps = 19/218 (8%) Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF-GLPTLVLIALKYQLHFD 247 + V F+LGI L++ RLS T L +L IF P LV + + + Sbjct: 94 VMVLGFLLGIPLAVM--RLS------TNPVLSILSWGYVWIFRSTPLLVQLLFWFNIGAL 145 Query: 248 KPVLG-------QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300 P LG QF + + ++ I L+ + AA+ AE++R G+++V GQ EAA Sbjct: 146 YPTLGLGLPFGPQFVTVKTVNLLGPTLTAVIGLTLHEAAYAAEVIRGGILSVDSGQTEAA 205 Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 ALGL R+ R +++PQAMRSI+P + + LK +S+ + DL+ + NQ+ Sbjct: 206 QALGLGRRRTLRRIVIPQAMRSIVPTAGNMLIGTLKGTSIVSVLAVHDLLYSVQLVYNQS 265 Query: 361 GQAIEIILIWMFIYLSLSIMIA---LFMNRLNAKIALK 395 Q I ++++ Y++++ +++ ++ R A+ A + Sbjct: 266 YQVIPLLMVATLWYIAVTTVLSAGQFYVERYYARGAAR 303 >gi|257866637|ref|ZP_05646290.1| amino acid ABC transporter [Enterococcus casseliflavus EC30] gi|257872847|ref|ZP_05652500.1| amino acid ABC transporter [Enterococcus casseliflavus EC10] gi|257800595|gb|EEV29623.1| amino acid ABC transporter [Enterococcus casseliflavus EC30] gi|257807011|gb|EEV35833.1| amino acid ABC transporter [Enterococcus casseliflavus EC10] Length = 529 Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 38/107 (35%), Positives = 62/107 (57%) Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 +S T A+++EIVR G+ AV GQ EAA A+G++H + V+LPQ MR+I+P ++ + Sbjct: 394 VSINTGAYMSEIVRGGIFAVDDGQFEAAQAIGMSHWQTMIKVVLPQVMRNILPATGNEII 453 Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379 +K++++ + ADL G + Q + I IYL L+I Sbjct: 454 INIKDTAVLSVISVADLFFQGTSAAGTNFQYFQTFAIIGVIYLVLTI 500 >gi|33592469|ref|NP_880113.1| putative amino-acid ABC transporter, permease protein [Bordetella pertussis Tohama I] gi|33601481|ref|NP_889041.1| putative amino-acid ABC transporter, permease protein [Bordetella bronchiseptica RB50] gi|33572115|emb|CAE41655.1| putative amino-acid ABC transporter, permease protein [Bordetella pertussis Tohama I] gi|33575917|emb|CAE32996.1| putative amino-acid ABC transporter, permease protein [Bordetella bronchiseptica RB50] Length = 226 Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 36/121 (29%), Positives = 64/121 (52%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I + A+ +E++R + ++PRGQ EAA +L +T +A R +LPQA R +PPL + Sbjct: 94 IGFTLNVGAYNSEVIRGAIESIPRGQWEAAYSLSMTRGQAMRRTVLPQAARVAVPPLANS 153 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++ L+K++SLA + ++ I T + + + IYL S ++ RL Sbjct: 154 FIALVKDTSLAAVLTVPEIFQAAQRIAAVTYEPLILYTEAALIYLVFSSALSSLQVRLEK 213 Query: 391 K 391 + Sbjct: 214 R 214 >gi|259909373|ref|YP_002649729.1| Putative amino acid ABC transporter, permease protein [Erwinia pyrifoliae Ep1/96] gi|224964995|emb|CAX56523.1| Putative amino acid ABC transporter, permease protein [Erwinia pyrifoliae Ep1/96] gi|283479445|emb|CAY75361.1| putative ABC transport system, inner membrane component [Erwinia pyrifoliae DSM 12163] Length = 221 Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 36/102 (35%), Positives = 59/102 (57%) Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 A+ EI+R+G+ P+GQ EA LG+T R+ V+LP A++ I P L SQ + ++ Sbjct: 102 GAYSTEIIRAGIQVTPKGQWEAGRVLGMTRRQTFMRVVLPPALKRIYPALVSQCIIVMLG 161 Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379 SS+ V + +L I ++T + E+ L+ +YL+LSI Sbjct: 162 SSVVSQVSYEELTFAANLIQSRTFLSFEVYLVTTLMYLALSI 203 >gi|190892981|ref|YP_001979523.1| probable amino acid ABC transporter, permease protein [Rhizobium etli CIAT 652] gi|190698260|gb|ACE92345.1| probable amino acid ABC transporter, permease protein [Rhizobium etli CIAT 652] Length = 230 Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 59/217 (27%), Positives = 104/217 (47%), Gaps = 25/217 (11%) Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHF---------HEKTGKALPLLYISTFLIFG 231 LT+ IFV S ++G SLFA R ++ K +P++ + +G Sbjct: 20 LTLAMALVIFVLSTIIG---SLFAMVEYRRIPVLRQLVVAYKVAFKGVPMVVVIFLAYYG 76 Query: 232 LPTLVLIALKYQLHFDKPVLG-QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290 LP+ L F ++G ++N G ST P +++L +AL+ AAF AE+V+ L Sbjct: 77 LPS--------TLQFLTSLVGGEYN--GHST--PNWVTLIVALTACVAAFQAEVVKGALN 124 Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 + GQ +AA +LG + R V+LPQ + + IP L + ++ ++K SL A+ D+ Sbjct: 125 SFDTGQADAAYSLGYRKSQLFRRVMLPQVVVAAIPDLANSFMVIMKALSLGFAIEVVDIF 184 Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387 + +E L+ + IY+ ++ + +R Sbjct: 185 AQSQLTAALNFYYLEAFLVAVVIYMVIAYAVTQIADR 221 >gi|126667886|ref|ZP_01738852.1| amino acid ABC transproter, permease protein [Marinobacter sp. ELB17] gi|126627702|gb|EAZ98333.1| amino acid ABC transproter, permease protein [Marinobacter sp. ELB17] Length = 224 Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 31/91 (34%), Positives = 60/91 (65%), Gaps = 2/91 (2%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + L+ + +A++AE +R+ +I V R Q EAA+++G+T+ + R ++LPQA R +P L + Sbjct: 97 MGLTLHFSAYMAESIRAAIIGVDRSQTEAALSIGMTNSQLMRRIILPQATRVALPTLMNY 156 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361 +++++K +SLA +G +L +G T +G Sbjct: 157 FIDMIKATSLAFTLGVTEL--MGATQKEASG 185 >gi|187919539|ref|YP_001888570.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia phytofirmans PsJN] gi|187717977|gb|ACD19200.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia phytofirmans PsJN] Length = 240 Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 54/199 (27%), Positives = 96/199 (48%), Gaps = 12/199 (6%) Query: 204 ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL----GQFNFIGG 259 A +LSR +T + + +Y + F G+P L++I Y +F L GQ G Sbjct: 45 AAKLSRF---RTLRVIGDIYTTVFR--GVPELLVI---YLFYFGGSTLVTSVGQLFGAEG 96 Query: 260 STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319 P F+ +A+ + A+ AE+ RS ++AV RG++EAA ++G+ R +L+PQ Sbjct: 97 FVGVPPFVVGALAVGMISGAYQAEVYRSAVLAVSRGELEAARSIGMPTLTMARRILIPQV 156 Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379 +R +P + + + LK+S+L G A+L+ T Q ++ +YL ++ Sbjct: 157 LRFALPGIGNVWQLSLKDSALISVTGLAELLRTSQVAAGSTHQYFTFFVVGGALYLIMTS 216 Query: 380 MIALFMNRLNAKIALKEKK 398 + NR A + K+ Sbjct: 217 ISNRVFNRAEAHVGRSFKR 235 >gi|327440167|dbj|BAK16532.1| ABC-type amino acid transport system, permease component [Solibacillus silvestris StLB046] Length = 248 Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 34/122 (27%), Positives = 67/122 (54%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 F++ + +S T A++AE VR G++++ +GQ EAA A+G+ H + ++LPQ R+I Sbjct: 99 DRFLAASVVISLNTGAYMAEYVRGGIVSIDKGQFEAAQAIGMNHLQTMIHIVLPQVARNI 158 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 +P +Q++ +K+SS+ + +L +I + IE I +Y ++ + Sbjct: 159 LPATGNQFVMNIKDSSVLSVISVVELFFTANSIAGSNYKYIEAFFIATILYFIMTFTVTR 218 Query: 384 FM 385 F+ Sbjct: 219 FL 220 >gi|330939242|gb|EGH42645.1| amino acid ABC transporter permease [Pseudomonas syringae pv. pisi str. 1704B] Length = 225 Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 39/103 (37%), Positives = 57/103 (55%), Gaps = 3/103 (2%) Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 +A+ AEI+RS LI V +GQ +A AL A R ++LPQA+ +IPP+ +Q + LLK Sbjct: 103 SAYGAEIIRSALINVSQGQRDAVRALDFGPISAFRQIILPQALPFMIPPMGNQLVELLKT 162 Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380 +SL + DL G +I GQ LIW + + +M Sbjct: 163 TSLVSLITLTDLTFTGSQLITTLGQQ---TLIWSIVLVCYFVM 202 >gi|298489316|ref|ZP_07007331.1| Arginine ABC transporter, permease protein ArtQ [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298156167|gb|EFH97272.1| Arginine ABC transporter, permease protein ArtQ [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 231 Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 50/180 (27%), Positives = 89/180 (49%), Gaps = 23/180 (12%) Query: 214 KTGKALPLLYI-STF--LIFGLPTLVLIALKY-----QLH-----FDKPVLGQFNFIGGS 260 KT PL ++ ST+ L+ G+P L+ + L Y +H FD P L F G Sbjct: 41 KTSPYKPLQWLGSTYSTLVRGIPELLWVLLIYFGTVNGMHALGKLFDIPDLALSAFSAG- 99 Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320 IAL A+ E+ R ++A+P+G EA +ALG++ + ++LPQ Sbjct: 100 ---------VIALGICFGAYATEVFRGAILAIPKGHREAGLALGMSRSRILFKLVLPQMW 150 Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380 R +P L + ++ L+K+++L +G +++ + T QA ++ F+YL L+++ Sbjct: 151 RIALPGLGNLFMILMKDTALVSVIGLEEIMRHAQIAVGFTKQAFTFYMVAAFMYLGLTVL 210 >gi|330877312|gb|EGH11461.1| amino acid ABC transporter permease [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 242 Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 52/156 (33%), Positives = 79/156 (50%), Gaps = 8/156 (5%) Query: 224 ISTFLIFGLPTLVLIALK-YQLHFDKPVLG---QFNFIGGSTVSPEFMSLYIALSCYTAA 279 I T LI G+P LVL+ L Y L +L ++ +I ++P F + I L A Sbjct: 65 IYTTLIRGIPDLVLMLLIFYSLQTWLTMLTDAMEWEYI---EINP-FGAGVITLGFIYGA 120 Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339 + E R +++VPRGQ+EAA A GL + R V+ PQ MR +P + + + +LK ++ Sbjct: 121 YFTETFRGAILSVPRGQVEAATAYGLKRGQRFRYVVFPQMMRYALPGIGNNWQVMLKATA 180 Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375 L +G ADLV T Q +++ IYL Sbjct: 181 LVSIIGLADLVKASQDAGKSTYQLFYFLVLAALIYL 216 >gi|306829072|ref|ZP_07462262.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus mitis ATCC 6249] gi|304428158|gb|EFM31248.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus mitis ATCC 6249] Length = 219 Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 29/73 (39%), Positives = 51/73 (69%) Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 A + +T+A +AEI+R GL AV +GQ EA ++ G T + ++LPQA+R ++P + SQ+ Sbjct: 90 AFTLFTSAALAEIIRGGLNAVDKGQYEAGMSQGFTSAQILYYIILPQAIRKMLPAIISQF 149 Query: 332 LNLLKNSSLAVAV 344 + ++K++SL +V Sbjct: 150 VTVIKDTSLLYSV 162 Score = 37.0 bits (84), Expect = 4.8, Method: Compositional matrix adjust. Identities = 19/61 (31%), Positives = 36/61 (59%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 I GF T +++ ++ +T+IGT++ R N ++ I +Y+E RN+P L+ IF + Sbjct: 16 IFKGFGLTLYISLIAIVLSTLIGTVLAVMRNGKNPVLRIISSIYIEFVRNVPNLLWIFTI 75 Query: 149 Y 149 + Sbjct: 76 F 76 >gi|146311036|ref|YP_001176110.1| arginine transporter permease subunit ArtQ [Enterobacter sp. 638] gi|145317912|gb|ABP60059.1| L-arginine ABC transporter membrane protein [Enterobacter sp. 638] Length = 238 Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 55/187 (29%), Positives = 95/187 (50%), Gaps = 10/187 (5%) Query: 217 KALPLLYISTFLIFGLPTLVLI---ALKYQLHFDK-PVLGQF-NFIGGSTVSPEFMSLYI 271 + LP + + F+ FG L+L L F + PV Q NF VSP F+ I Sbjct: 55 RGLPEILVVLFIYFGSSQLLLTLSDGFTLNLGFAQIPVQMQIENF----DVSP-FLCGVI 109 Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 ALS +A+ ++ +R L AVP GQ E+ ALGL+ +++PQ R +P L +Q+ Sbjct: 110 ALSLLYSAYASQTLRGALKAVPIGQWESGQALGLSKTAIFFRLVMPQMWRHALPGLGNQW 169 Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 L LLK+++L + DL+ +I +T + ++ IYL ++++ + R++ + Sbjct: 170 LVLLKDTALVSLISVNDLMLQTKSIATRTQEPFTWYIVAAAIYLVITLLSQYVLKRIDLR 229 Query: 392 IALKEKK 398 E++ Sbjct: 230 ATRFERR 236 >gi|319938930|ref|ZP_08013294.1| inner membrane amino-acid ABC transporter permease YecS [Streptococcus anginosus 1_2_62CV] gi|319811980|gb|EFW08246.1| inner membrane amino-acid ABC transporter permease YecS [Streptococcus anginosus 1_2_62CV] Length = 213 Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 31/92 (33%), Positives = 55/92 (59%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IA + AA+ AEI R G++++P GQ EAA L T + ++LPQ ++ ++P + ++ Sbjct: 89 IAFTLNYAAYFAEIFRGGILSIPAGQYEAAKVLKFTPFQTIWFIILPQVVKVVLPSVFNE 148 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362 + L+K++SL A+G +DL+ T N+ Sbjct: 149 VMTLVKDTSLVYALGVSDLILASRTAANRDAS 180 >gi|99078017|ref|YP_611275.1| amino acid ABC transporter permease [Ruegeria sp. TM1040] gi|99035155|gb|ABF62013.1| Amino acid ABC transporter permease protein 3-TM region His/Glu/Gln/Arg/opine [Ruegeria sp. TM1040] Length = 216 Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 48/146 (32%), Positives = 78/146 (53%), Gaps = 12/146 (8%) Query: 207 LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP-VLGQFNFIGGSTVSPE 265 + R F A L+IS F G P LV + L Y + P VLG I G T + Sbjct: 35 VERVFQIPVLDAFVRLFISFFR--GTPLLVQLFLFY---YGLPQVLGFLGSIDGVTAT-- 87 Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 + L+ + +A++AE +R+ ++ V R Q EAA A+G+T + R ++LPQA R P Sbjct: 88 ----IMGLTLHFSAYMAESIRAAILGVDRSQWEAAQAVGMTQGQMMRQIILPQAARVAAP 143 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVS 351 L + +++++K +SLA +G +L+ Sbjct: 144 TLVNYFIDMIKGTSLAFTLGVTELMG 169 >gi|33591940|ref|NP_879584.1| glutamate/aspartate transport system permease protein [Bordetella pertussis Tohama I] gi|33599320|ref|NP_886880.1| glutamate/aspartate transport system permease protein [Bordetella bronchiseptica RB50] gi|33571584|emb|CAE41073.1| glutamate/aspartate transport system permease protein [Bordetella pertussis Tohama I] gi|33575366|emb|CAE30829.1| glutamate/aspartate transport system permease protein [Bordetella bronchiseptica RB50] Length = 227 Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 42/150 (28%), Positives = 81/150 (54%), Gaps = 15/150 (10%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 ++LPL+ + + F LP L L++ ++P+ + G+T S ++ + Sbjct: 65 RSLPLVLVIFLIYFILPYL----LQWITQAERPI------VLGATGSA-----FVTFILF 109 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 AA+ +EI+R+G+ +V GQ A ALGLTH + R V+LPQA+R+++P L +Q + + + Sbjct: 110 EAAYFSEIIRAGIGSVGPGQYAAGSALGLTHGQVLRKVILPQAVRNMLPVLLTQVIVIFQ 169 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 ++L + D + I + + +E+ Sbjct: 170 ETALVYVLSLPDFLGAATKIAQRDNRLVEM 199 Score = 40.4 bits (93), Expect = 0.47, Method: Compositional matrix adjust. Identities = 20/60 (33%), Positives = 32/60 (53%) Query: 90 LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 L G + L S ++G L+ RL + VAW +YV +FR++P ++VIF +Y Sbjct: 18 LTGLRFSLLLTLSSAAGGVVLGALLAIARLYGRRWVAWPAAIYVNLFRSLPLVLVIFLIY 77 >gi|16128830|ref|NP_415383.1| arginine transporter subunit [Escherichia coli str. K-12 substr. MG1655] gi|24112232|ref|NP_706742.1| arginine transporter permease subunit ArtQ [Shigella flexneri 2a str. 301] gi|26246885|ref|NP_752925.1| arginine transporter permease subunit ArtQ [Escherichia coli CFT073] gi|30062344|ref|NP_836515.1| arginine transporter permease subunit ArtQ [Shigella flexneri 2a str. 2457T] gi|74311406|ref|YP_309825.1| arginine transporter permease subunit ArtQ [Shigella sonnei Ss046] gi|82543350|ref|YP_407297.1| arginine transporter permease subunit ArtQ [Shigella boydii Sb227] gi|89107713|ref|AP_001493.1| arginine transporter subunit [Escherichia coli str. K-12 substr. W3110] gi|110804859|ref|YP_688379.1| arginine transporter permease subunit ArtQ [Shigella flexneri 5 str. 8401] gi|157157070|ref|YP_001462060.1| arginine transporter permease subunit ArtQ [Escherichia coli E24377A] gi|157160385|ref|YP_001457703.1| arginine transporter permease subunit ArtQ [Escherichia coli HS] gi|170020735|ref|YP_001725689.1| arginine transporter permease subunit ArtQ [Escherichia coli ATCC 8739] gi|170080521|ref|YP_001729841.1| arginine ABC transporter membrane protein [Escherichia coli str. K-12 substr. DH10B] gi|170680675|ref|YP_001742970.1| arginine transporter permease subunit ArtQ [Escherichia coli SMS-3-5] gi|188493002|ref|ZP_03000272.1| arginine ABC transporter, permease protein ArtQ [Escherichia coli 53638] gi|191166206|ref|ZP_03028040.1| arginine ABC transporter, permease protein ArtQ [Escherichia coli B7A] gi|193064495|ref|ZP_03045576.1| arginine ABC transporter, permease protein ArtQ [Escherichia coli E22] gi|194428219|ref|ZP_03060762.1| arginine ABC transporter, permease protein ArtQ [Escherichia coli B171] gi|194438384|ref|ZP_03070474.1| arginine ABC transporter, permease protein ArtQ [Escherichia coli 101-1] gi|209918111|ref|YP_002292195.1| arginine transporter permease subunit ArtQ [Escherichia coli SE11] gi|215485993|ref|YP_002328424.1| arginine transporter permease subunit ArtQ [Escherichia coli O127:H6 str. E2348/69] gi|218553448|ref|YP_002386361.1| arginine transporter permease subunit ArtQ [Escherichia coli IAI1] gi|218694336|ref|YP_002402003.1| arginine transporter permease subunit ArtQ [Escherichia coli 55989] gi|218699238|ref|YP_002406867.1| arginine transporter permease subunit ArtQ [Escherichia coli IAI39] gi|227884174|ref|ZP_04001979.1| arginine transporter subunit [Escherichia coli 83972] gi|238900121|ref|YP_002925917.1| arginine transporter subunit [Escherichia coli BW2952] gi|253774108|ref|YP_003036939.1| arginine transporter permease subunit ArtQ [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254160977|ref|YP_003044085.1| arginine transporter permease ArtQ [Escherichia coli B str. REL606] gi|256021017|ref|ZP_05434882.1| arginine transporter permease subunit ArtQ [Shigella sp. D9] gi|256023511|ref|ZP_05437376.1| arginine transporter permease subunit ArtQ [Escherichia sp. 4_1_40B] gi|260843113|ref|YP_003220891.1| arginine 3rd transport system permease protein ArtQ [Escherichia coli O103:H2 str. 12009] gi|260854154|ref|YP_003228045.1| arginine 3rd transport system permease protein ArtQ [Escherichia coli O26:H11 str. 11368] gi|260867035|ref|YP_003233437.1| arginine 3rd transport system permease protein ArtQ [Escherichia coli O111:H- str. 11128] gi|293414143|ref|ZP_06656792.1| arginine transporter permease subunit ArtQ [Escherichia coli B185] gi|293433160|ref|ZP_06661588.1| arginine transporter permease subunit ArtQ [Escherichia coli B088] gi|300817038|ref|ZP_07097257.1| ABC transporter, permease protein [Escherichia coli MS 107-1] gi|300824003|ref|ZP_07104125.1| ABC transporter, permease protein [Escherichia coli MS 119-7] gi|300902395|ref|ZP_07120378.1| ABC transporter, permease protein [Escherichia coli MS 84-1] gi|300924471|ref|ZP_07140441.1| ABC transporter, permease protein [Escherichia coli MS 182-1] gi|300929328|ref|ZP_07144802.1| ABC transporter, permease protein [Escherichia coli MS 187-1] gi|300947047|ref|ZP_07161269.1| ABC transporter, permease protein [Escherichia coli MS 116-1] gi|300957066|ref|ZP_07169311.1| ABC transporter, permease protein [Escherichia coli MS 175-1] gi|300993466|ref|ZP_07180408.1| ABC transporter, permease protein [Escherichia coli MS 45-1] gi|301027624|ref|ZP_07190945.1| ABC transporter, permease protein [Escherichia coli MS 196-1] gi|301051210|ref|ZP_07198039.1| ABC transporter, permease protein [Escherichia coli MS 185-1] gi|301305366|ref|ZP_07211461.1| ABC transporter, permease protein [Escherichia coli MS 124-1] gi|301325870|ref|ZP_07219303.1| ABC transporter, permease protein [Escherichia coli MS 78-1] gi|301646302|ref|ZP_07246192.1| ABC transporter, permease protein [Escherichia coli MS 146-1] gi|307137490|ref|ZP_07496846.1| arginine transporter permease subunit ArtQ [Escherichia coli H736] gi|307311750|ref|ZP_07591390.1| polar amino acid ABC transporter, inner membrane subunit [Escherichia coli W] gi|309795343|ref|ZP_07689761.1| ABC transporter, permease protein [Escherichia coli MS 145-7] gi|312969071|ref|ZP_07783278.1| arginine transport system permease protein artQ [Escherichia coli 2362-75] gi|331641383|ref|ZP_08342518.1| arginine transport system permease protein ArtQ [Escherichia coli H736] gi|331646130|ref|ZP_08347233.1| arginine transport system permease protein ArtQ [Escherichia coli M605] gi|331651880|ref|ZP_08352899.1| arginine transport system permease protein ArtQ [Escherichia coli M718] gi|331667236|ref|ZP_08368101.1| arginine transport system permease protein ArtQ [Escherichia coli TA271] gi|331676650|ref|ZP_08377346.1| arginine transport system permease protein ArtQ [Escherichia coli H591] gi|331682371|ref|ZP_08382990.1| arginine transport system permease protein ArtQ [Escherichia coli H299] gi|83287906|sp|P0AE35|ARTQ_ECOL6 RecName: Full=Arginine ABC transporter permease protein ArtQ gi|83287907|sp|P0AE34|ARTQ_ECOLI RecName: Full=Arginine ABC transporter permease protein ArtQ gi|83287908|sp|P0AE36|ARTQ_SHIFL RecName: Full=Arginine ABC transporter permease protein ArtQ gi|26107285|gb|AAN79468.1|AE016758_72 Arginine transport system permease protein artQ [Escherichia coli CFT073] gi|1651395|dbj|BAA35576.1| arginine transporter subunit [Escherichia coli str. K12 substr. W3110] gi|1787087|gb|AAC73949.1| arginine transporter subunit [Escherichia coli str. K-12 substr. MG1655] gi|24051079|gb|AAN42449.1| arginine 3rd transport system permease protein [Shigella flexneri 2a str. 301] gi|30040589|gb|AAP16321.1| arginine 3rd transport system permease protein [Shigella flexneri 2a str. 2457T] gi|73854883|gb|AAZ87590.1| arginine 3rd transport system permease protein [Shigella sonnei Ss046] gi|81244761|gb|ABB65469.1| arginine 3rd transport system permease protein [Shigella boydii Sb227] gi|110614407|gb|ABF03074.1| arginine 3rd transport system permease protein [Shigella flexneri 5 str. 8401] gi|157066065|gb|ABV05320.1| arginine ABC transporter, permease protein ArtQ [Escherichia coli HS] gi|157079100|gb|ABV18808.1| arginine ABC transporter, permease protein ArtQ [Escherichia coli E24377A] gi|169755663|gb|ACA78362.1| polar amino acid ABC transporter, inner membrane subunit [Escherichia coli ATCC 8739] gi|169888356|gb|ACB02063.1| arginine transporter subunit; membrane component of ABC superfamily [Escherichia coli str. K-12 substr. DH10B] gi|170518393|gb|ACB16571.1| arginine ABC transporter, permease protein ArtQ [Escherichia coli SMS-3-5] gi|188488201|gb|EDU63304.1| arginine ABC transporter, permease protein ArtQ [Escherichia coli 53638] gi|190903815|gb|EDV63530.1| arginine ABC transporter, permease protein ArtQ [Escherichia coli B7A] gi|192928957|gb|EDV82570.1| arginine ABC transporter, permease protein ArtQ [Escherichia coli E22] gi|194413779|gb|EDX30058.1| arginine ABC transporter, permease protein ArtQ [Escherichia coli B171] gi|194422608|gb|EDX38605.1| arginine ABC transporter, permease protein ArtQ [Escherichia coli 101-1] gi|209911370|dbj|BAG76444.1| arginine ABC transporter permease component [Escherichia coli SE11] gi|215264065|emb|CAS08407.1| arginine 3rd transport system permease protein ArtQ; membrane component of ABC superfamily [Escherichia coli O127:H6 str. E2348/69] gi|218351068|emb|CAU96772.1| arginine transporter subunit ;membrane component of ABC superfamily [Escherichia coli 55989] gi|218360216|emb|CAQ97766.1| arginine transporter subunit ;membrane component of ABC superfamily [Escherichia coli IAI1] gi|218369224|emb|CAR16979.1| arginine transporter subunit ;membrane component of ABC superfamily [Escherichia coli IAI39] gi|222032591|emb|CAP75330.1| Arginine transport system permease protein artQ [Escherichia coli LF82] gi|227838926|gb|EEJ49392.1| arginine transporter subunit [Escherichia coli 83972] gi|238860008|gb|ACR62006.1| arginine transporter subunit [Escherichia coli BW2952] gi|242376678|emb|CAQ31390.1| artQ, subunit of arginine ABC transporter [Escherichia coli BL21(DE3)] gi|253325152|gb|ACT29754.1| polar amino acid ABC transporter, inner membrane subunit [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253972878|gb|ACT38549.1| arginine transporter subunit [Escherichia coli B str. REL606] gi|253977092|gb|ACT42762.1| arginine transporter subunit [Escherichia coli BL21(DE3)] gi|257752803|dbj|BAI24305.1| arginine 3rd transport system permease protein ArtQ [Escherichia coli O26:H11 str. 11368] gi|257758260|dbj|BAI29757.1| arginine 3rd transport system permease protein ArtQ [Escherichia coli O103:H2 str. 12009] gi|257763391|dbj|BAI34886.1| arginine 3rd transport system permease protein ArtQ [Escherichia coli O111:H- str. 11128] gi|260449991|gb|ACX40413.1| polar amino acid ABC transporter, inner membrane subunit [Escherichia coli DH1] gi|281177997|dbj|BAI54327.1| arginine ABC transporter permease component [Escherichia coli SE15] gi|281600185|gb|ADA73169.1| Arginine 3rd transport system permease protein [Shigella flexneri 2002017] gi|291323979|gb|EFE63401.1| arginine transporter permease subunit ArtQ [Escherichia coli B088] gi|291434201|gb|EFF07174.1| arginine transporter permease subunit ArtQ [Escherichia coli B185] gi|299879260|gb|EFI87471.1| ABC transporter, permease protein [Escherichia coli MS 196-1] gi|300297117|gb|EFJ53502.1| ABC transporter, permease protein [Escherichia coli MS 185-1] gi|300316151|gb|EFJ65935.1| ABC transporter, permease protein [Escherichia coli MS 175-1] gi|300405542|gb|EFJ89080.1| ABC transporter, permease protein [Escherichia coli MS 84-1] gi|300406580|gb|EFJ90118.1| ABC transporter, permease protein [Escherichia coli MS 45-1] gi|300419356|gb|EFK02667.1| ABC transporter, permease protein [Escherichia coli MS 182-1] gi|300453330|gb|EFK16950.1| ABC transporter, permease protein [Escherichia coli MS 116-1] gi|300462747|gb|EFK26240.1| ABC transporter, permease protein [Escherichia coli MS 187-1] gi|300523514|gb|EFK44583.1| ABC transporter, permease protein [Escherichia coli MS 119-7] gi|300530390|gb|EFK51452.1| ABC transporter, permease protein [Escherichia coli MS 107-1] gi|300839384|gb|EFK67144.1| ABC transporter, permease protein [Escherichia coli MS 124-1] gi|300847384|gb|EFK75144.1| ABC transporter, permease protein [Escherichia coli MS 78-1] gi|301075459|gb|EFK90265.1| ABC transporter, permease protein [Escherichia coli MS 146-1] gi|306908305|gb|EFN38804.1| polar amino acid ABC transporter, inner membrane subunit [Escherichia coli W] gi|307552705|gb|ADN45480.1| arginine transport system permease protein [Escherichia coli ABU 83972] gi|308120993|gb|EFO58255.1| ABC transporter, permease protein [Escherichia coli MS 145-7] gi|309701140|emb|CBJ00438.1| arginine ABC transporter, permease protein [Escherichia coli ETEC H10407] gi|312286473|gb|EFR14386.1| arginine transport system permease protein artQ [Escherichia coli 2362-75] gi|312945379|gb|ADR26206.1| arginine transporter permease subunit ArtQ [Escherichia coli O83:H1 str. NRG 857C] gi|313650231|gb|EFS14643.1| arginine transport system permease protein artQ [Shigella flexneri 2a str. 2457T] gi|315060147|gb|ADT74474.1| arginine transporter subunit [Escherichia coli W] gi|315135511|dbj|BAJ42670.1| arginine transporter permease subunit ArtQ [Escherichia coli DH1] gi|315257898|gb|EFU37866.1| ABC transporter, permease protein [Escherichia coli MS 85-1] gi|315292537|gb|EFU51889.1| ABC transporter, permease protein [Escherichia coli MS 153-1] gi|315619869|gb|EFV00388.1| arginine transport system permease protein artQ [Escherichia coli 3431] gi|320199097|gb|EFW73694.1| Arginine ABC transporter, permease protein ArtQ [Escherichia coli EC4100B] gi|323155764|gb|EFZ41933.1| arginine transport system permease protein artQ [Escherichia coli EPECa14] gi|323159684|gb|EFZ45663.1| arginine transport system permease protein artQ [Escherichia coli E128010] gi|323165795|gb|EFZ51581.1| arginine transport system permease protein artQ [Shigella sonnei 53G] gi|323175516|gb|EFZ61111.1| arginine transport system permease protein artQ [Escherichia coli 1180] gi|323185174|gb|EFZ70539.1| arginine transport system permease protein artQ [Escherichia coli 1357] gi|323190684|gb|EFZ75953.1| arginine transport system permease protein artQ [Escherichia coli RN587/1] gi|323379295|gb|ADX51563.1| polar amino acid ABC transporter, inner membrane subunit [Escherichia coli KO11] gi|323937969|gb|EGB34231.1| inner membrane transport system [Escherichia coli E1520] gi|323942779|gb|EGB38944.1| inner membrane transport system [Escherichia coli E482] gi|323947114|gb|EGB43125.1| inner membrane transport system [Escherichia coli H120] gi|323962975|gb|EGB58547.1| inner membrane transport system [Escherichia coli H489] gi|323969574|gb|EGB64862.1| inner membrane transport system [Escherichia coli TA007] gi|324015940|gb|EGB85159.1| ABC transporter, permease protein [Escherichia coli MS 117-3] gi|331038181|gb|EGI10401.1| arginine transport system permease protein ArtQ [Escherichia coli H736] gi|331044882|gb|EGI17009.1| arginine transport system permease protein ArtQ [Escherichia coli M605] gi|331050158|gb|EGI22216.1| arginine transport system permease protein ArtQ [Escherichia coli M718] gi|331065592|gb|EGI37485.1| arginine transport system permease protein ArtQ [Escherichia coli TA271] gi|331075339|gb|EGI46637.1| arginine transport system permease protein ArtQ [Escherichia coli H591] gi|331080002|gb|EGI51181.1| arginine transport system permease protein ArtQ [Escherichia coli H299] gi|332104596|gb|EGJ07942.1| arginine transporter permease subunit ArtQ [Shigella sp. D9] Length = 238 Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 55/186 (29%), Positives = 95/186 (51%), Gaps = 8/186 (4%) Query: 217 KALPLLYISTFLIFGLPTLVLI---ALKYQLHFDK-PVLGQFNFIGGSTVSPEFMSLYIA 272 + LP + + F+ FG L+L L F + PV Q + I VSP F+ IA Sbjct: 55 RGLPEILVVLFIYFGSSQLLLTLSDGFTINLGFVQIPV--QMD-IENFDVSP-FLCGVIA 110 Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 LS AA+ ++ +R L AVP GQ E+ ALGL+ +++PQ R +P L +Q+L Sbjct: 111 LSLLYAAYASQTLRGALKAVPVGQWESGQALGLSKSAIFFRLVMPQMWRHALPGLGNQWL 170 Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 LLK+++L + DL+ +I +T + ++ IYL ++++ + R++ + Sbjct: 171 VLLKDTALVSLISVNDLMLQTKSIATRTQEPFTWYIVAAAIYLVITLLSQYILKRIDLRA 230 Query: 393 ALKEKK 398 E++ Sbjct: 231 TRFERR 236 >gi|260583461|ref|ZP_05851209.1| amino acid ABC transporter amino acid-binding/permease [Granulicatella elegans ATCC 700633] gi|260158087|gb|EEW93155.1| amino acid ABC transporter amino acid-binding/permease [Granulicatella elegans ATCC 700633] Length = 257 Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 33/120 (27%), Positives = 70/120 (58%), Gaps = 1/120 (0%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G + F +++I +S T A+++EIVR G+I++ +GQ EAA A+G+TH + V+ PQ Sbjct: 95 GIDMDRTFAAIFI-VSINTGAYMSEIVRGGIISIDKGQFEAAQAIGMTHTQTMMNVVFPQ 153 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378 +R+I+P ++++ +K++S+ + ++L T+ + E + + +Y ++ Sbjct: 154 VIRNILPATGNEFVINIKDTSVLNVISVSELYFATKTVAGANFRYFETFFVTLILYFIMT 213 >gi|260222061|emb|CBA31249.1| hypothetical protein Csp_C27600 [Curvibacter putative symbiont of Hydra magnipapillata] Length = 226 Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 57/197 (28%), Positives = 96/197 (48%), Gaps = 11/197 (5%) Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240 +T+ V V G+VL+ A +LSRH + A + T ++ G+P +++ + Sbjct: 17 MTVQLACAALVCGLVFGLVLA--ACQLSRHAWLRRPVA-----VLTGVLRGVPEFLVVLV 69 Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300 Y F L +F +SP F + ++L+ A+ +E+ R +A+ RGQ+EAA Sbjct: 70 CY---FGLSNLINNHFDSAFDISPFFAGV-VSLALVLGAYASEVFRGSFVALERGQLEAA 125 Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 +LGL+ + LV LPQA R I L + + +LLK++SL VG DL+ + Sbjct: 126 RSLGLSPVQTFFLVRLPQAWRIAILSLGNLWQSLLKDTSLVSVVGLEDLLKKSNMAAQAS 185 Query: 361 GQAIEIILIWMFIYLSL 377 Q ++ +Y L Sbjct: 186 HQPFLFLMAAAVMYFCL 202 >gi|311107043|ref|YP_003979896.1| amino ABC transporter permease, 3-TM region, His/Glu/Gln/Arg/opine family domain-containing protein 12 [Achromobacter xylosoxidans A8] gi|310761732|gb|ADP17181.1| amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family domain protein 12 [Achromobacter xylosoxidans A8] Length = 227 Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 35/126 (27%), Positives = 68/126 (53%) Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327 S +I + AA+ +EI+R+G+ +V GQ A ALGL H + R V+LPQA R+++P L Sbjct: 101 SAFITFILFEAAYFSEIIRAGVGSVGPGQYAAGSALGLRHGQVLRKVILPQAFRNMLPVL 160 Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387 +Q + + + ++L + D + I + + +E+ ++ ++ +S + + Sbjct: 161 LTQVIVIFQETALVYVLSLTDFLGAATKIAQRDNRLVEMYMLVALVFFVISFTASRGVRA 220 Query: 388 LNAKIA 393 L A+I Sbjct: 221 LRARIG 226 Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust. Identities = 18/45 (40%), Positives = 29/45 (64%) Query: 105 IPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 + ++GTL+ RL +L AW VYV +FR++P ++VIF +Y Sbjct: 33 VGGVLLGTLLAVARLYGGRLAAWPATVYVNLFRSLPLVLVIFLIY 77 >gi|153011889|ref|YP_001373102.1| polar amino acid ABC transporter, inner membrane subunit [Ochrobactrum anthropi ATCC 49188] gi|151563777|gb|ABS17273.1| polar amino acid ABC transporter, inner membrane subunit [Ochrobactrum anthropi ATCC 49188] Length = 222 Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 43/142 (30%), Positives = 73/142 (51%), Gaps = 1/142 (0%) Query: 254 FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313 F I +SP F+S IAL+ YT+A +E R+ L ++ + Q +A ALGL+ Sbjct: 79 FPIIFDVELSP-FISAVIALTLYTSAITSESFRAALGSIGQDQHDACKALGLSRFSKMMY 137 Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI 373 V+ PQ + IP L S ++L K S+L AVG +L+ I N T + +E++ + Sbjct: 138 VVAPQTIVRAIPNLMSNLVSLFKESALVSAVGVVELMYTAQNISNVTARPVEVLTTAALV 197 Query: 374 YLSLSIMIALFMNRLNAKIALK 395 Y + ++ +N ++ +K Sbjct: 198 YFVIGWVLTRLVNAAETRLLVK 219 Score = 45.8 bits (107), Expect = 0.011, Method: Compositional matrix adjust. Identities = 23/66 (34%), Positives = 36/66 (54%) Query: 84 SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143 Y A+L G V T + + + + G L+G GR S + V W C +YVEV R P L+ Sbjct: 11 QYGPALLKGLVLTLQITVLCGLASVVFGFLIGVGRKSNVRPVRWACSLYVEVLRGTPVLI 70 Query: 144 VIFFLY 149 +F+++ Sbjct: 71 TLFWVF 76 >gi|186471955|ref|YP_001863273.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia phymatum STM815] gi|184198264|gb|ACC76227.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia phymatum STM815] Length = 246 Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 59/197 (29%), Positives = 95/197 (48%), Gaps = 30/197 (15%) Query: 197 GIVLSLFATRLSRHFHEKT----GKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252 GI LS+ TR + H T +A+P+L + + F +P L LH D P L Sbjct: 48 GIALSM--TRGATHLALVTIVGFFRAIPVLMLIFWTFFLMPML--------LHVDVPGLA 97 Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312 ++ AL+ A+++ V++G+ AV GQ +AA +LGLT + R Sbjct: 98 ---------------AVVCALALVGGAYLSHSVQAGIAAVGAGQRQAAASLGLTCWQTLR 142 Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ-TGQAIEIILIWM 371 VLLPQA+R + P +Q+++L K++SLA VG + + + N+ ++I L Sbjct: 143 YVLLPQAVRIMTPSFVNQWVSLTKDTSLAYIVGVPEFTFLANQVNNRLMVYPVQIFLFVG 202 Query: 372 FIYLSLSIMIALFMNRL 388 +YL L + RL Sbjct: 203 LVYLLLCSALQFVATRL 219 >gi|266622948|ref|ZP_06115883.1| amino acid ABC transporter, permease protein [Clostridium hathewayi DSM 13479] gi|288865281|gb|EFC97579.1| amino acid ABC transporter, permease protein [Clostridium hathewayi DSM 13479] Length = 216 Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 33/115 (28%), Positives = 66/115 (57%), Gaps = 1/115 (0%) Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 AA+ AEI RSG+ ++P GQ EAA LG + + ++ PQ M+ I+P +T++ + L+K+ Sbjct: 99 AAYFAEIYRSGIQSMPVGQYEAAKLLGYSKTQTFFRIIFPQVMKRILPSVTNEVITLVKD 158 Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 +SLA + ++ +V + + I + +F Y+ ++++A+ M ++ Sbjct: 159 TSLAFTISVLEMFAVAKALASSQTSLIPFVAAGLFYYI-FNLLVAVIMEYAEKRL 212 >gi|310766722|gb|ADP11672.1| Putative amino acid ABC transporter, permease protein [Erwinia sp. Ejp617] Length = 221 Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 36/102 (35%), Positives = 59/102 (57%) Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 A+ EI+R+G+ P+GQ EA LG+T R+ V+LP A++ I P L SQ + ++ Sbjct: 102 GAYSTEIIRAGIQVTPKGQWEAGRVLGMTRRQTFMRVVLPPALKRIYPALVSQCIIVMLG 161 Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379 SS+ V + +L I ++T + E+ L+ +YL+LSI Sbjct: 162 SSVVSQVSYEELTFAANLIQSRTFLSFEVYLVTTLMYLALSI 203 >gi|296162379|ref|ZP_06845172.1| binding-protein-dependent transport systems inner membrane component [Burkholderia sp. Ch1-1] gi|295887412|gb|EFG67237.1| binding-protein-dependent transport systems inner membrane component [Burkholderia sp. Ch1-1] Length = 280 Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 46/130 (35%), Positives = 67/130 (51%), Gaps = 10/130 (7%) Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSP--EFMSLYIALSCYTAAFIAEIVRSGLIAV 292 + L A+ Y L F V G TV P F+ + LS A +AE +R G+ A+ Sbjct: 123 IALYAMLYLLPFYVAVFG--------TVIPFSPFVKAVVGLSLPVTANVAEAMRGGIEAI 174 Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352 P GQ E+A ALG + R ++LPQA+ ++P + + Y L +SLAV G +D++SV Sbjct: 175 PSGQWESARALGYRKNQILRYIVLPQAIPLLMPNMMTVYAGLFIGTSLAVVTGTSDVLSV 234 Query: 353 GGTIINQTGQ 362 TI G Sbjct: 235 ANTITASDGS 244 >gi|258545834|ref|ZP_05706068.1| amino acid ABC superfamily ATP binding cassette transporter, permease protein [Cardiobacterium hominis ATCC 15826] gi|258518850|gb|EEV87709.1| amino acid ABC superfamily ATP binding cassette transporter, permease protein [Cardiobacterium hominis ATCC 15826] Length = 231 Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 35/116 (30%), Positives = 62/116 (53%) Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 TAA+ AEIVR + P+G++EAA ALG+ R+ ++LP A R +P ++ + +L Sbjct: 112 TAAYTAEIVRGAIETTPKGEIEAAKALGMNRRQIQWRIILPGAARRALPAYGNEIIFMLH 171 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 S++A D+ V T+ +T + L IYL++++ I R+ ++ Sbjct: 172 GSAIASTATLLDITGVANTLYTRTYEPFAPFLTAAVIYLAITLCIVGIFRRIEKRL 227 >gi|320324765|gb|EFW80839.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. glycinea str. B076] Length = 225 Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 39/103 (37%), Positives = 57/103 (55%), Gaps = 3/103 (2%) Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 +A+ AEI+RS LI V +GQ +A AL A R ++LPQA+ +IPP+ +Q + LLK Sbjct: 103 SAYGAEIIRSALINVSQGQRDAVRALDFGPISAFRRIILPQALPFMIPPMGNQLVELLKT 162 Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380 +SL + DL G +I GQ LIW + + +M Sbjct: 163 TSLVSLITLTDLTFTGSQLITTLGQQ---TLIWSIVLVCYFVM 202 >gi|121609113|ref|YP_996920.1| beta tubulin [Verminephrobacter eiseniae EF01-2] gi|121553753|gb|ABM57902.1| Beta tubulin, autoregulation binding site [Verminephrobacter eiseniae EF01-2] Length = 222 Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 37/123 (30%), Positives = 66/123 (53%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + L + A+ +E++R L +VP GQ EAA+AL ++ R ++LPQA+ + +PP T+ Sbjct: 88 VGLGLHYGAYGSELLRGALHSVPNGQYEAALALNMSAATRMRRIVLPQALLNALPPATNL 147 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 + LLK +SL + +DL + T + EI + + IY L+ I+ M + Sbjct: 148 MIELLKGTSLVSLITLSDLTFRARQLDESTFRTAEIFSLTLVIYFVLAQTISYAMRHVER 207 Query: 391 KIA 393 ++ Sbjct: 208 RLG 210 >gi|330817216|ref|YP_004360921.1| ABC polar amino acid transporter, inner membrane subunit [Burkholderia gladioli BSR3] gi|327369609|gb|AEA60965.1| ABC polar amino acid transporter, inner membrane subunit [Burkholderia gladioli BSR3] Length = 218 Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 55/187 (29%), Positives = 95/187 (50%), Gaps = 20/187 (10%) Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240 +T++ FV S ++G+ +L +R +G A ++ + I GLP +V + Sbjct: 19 VTVEITVCSFVLSTLIGLAFALMRVSPNRLL---SGGAAAVINV----IRGLPIIVQL-- 69 Query: 241 KYQLHFDKPVLG-QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299 + ++F P LG Q + F + I L +A+ AE R+G+ A+ RGQ+EA Sbjct: 70 -FYIYFVLPDLGVQLS---------AFQAGCIGLGIAYSAYQAENFRAGIEAIDRGQIEA 119 Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359 A ++G+ R V+LPQA R +PP + + +LK+SSLA + A++ G I + Sbjct: 120 AQSIGMRGAMIMRRVVLPQAFRIALPPYGNTLVMMLKDSSLASTITVAEMTRAGQLIASS 179 Query: 360 TGQAIEI 366 T Q + + Sbjct: 180 TFQNMTV 186 >gi|329116585|ref|ZP_08245302.1| putative glutamine ABC transporter, permease protein GlnP [Streptococcus parauberis NCFD 2020] gi|326906990|gb|EGE53904.1| putative glutamine ABC transporter, permease protein GlnP [Streptococcus parauberis NCFD 2020] Length = 215 Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 39/126 (30%), Positives = 71/126 (56%), Gaps = 4/126 (3%) Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 + + +T+A +AEIVR GL V GQ EA ++ GL + L++ PQA+R ++P + SQ+ Sbjct: 87 SFTVFTSAALAEIVRGGLNGVDNGQTEAGLSQGLKPSQVFLLIVFPQAIRKMLPAIISQF 146 Query: 332 LNLLKNSSLAVAV-GFADLVSVGGTIINQTGQAIEIILIWMF---IYLSLSIMIALFMNR 387 + ++K++SL +V +L ++ + QA E+ ++ IY ++ +I+ R Sbjct: 147 VTVIKDTSLLYSVIAIQELFGKSQILMGKFFQAKEVFALYALVTGIYFIINFIISTLSRR 206 Query: 388 LNAKIA 393 L K A Sbjct: 207 LAKKWA 212 Score = 46.2 bits (108), Expect = 0.009, Method: Compositional matrix adjust. Identities = 25/63 (39%), Positives = 38/63 (60%) Query: 87 TAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIF 146 T IL GF T +++F +I +TI GT++ R NKL I +Y+E RN+P L+ IF Sbjct: 11 TFILKGFALTLYISFVSIILSTIFGTILAIMRNGKNKLFKVISGIYIEFVRNVPNLLWIF 70 Query: 147 FLY 149 ++ Sbjct: 71 IIF 73 >gi|319405907|emb|CBI79539.1| Glutamate/aspartate transport system permease protein gltK [Bartonella sp. AR 15-3] Length = 178 Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 38/139 (27%), Positives = 78/139 (56%), Gaps = 1/139 (0%) Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315 FI G+++ S I + + AA+ AEI+R+G++++ +GQ A ALG+T+ + +V+ Sbjct: 39 FIIGTSIGAN-KSALITFTAFEAAYFAEIMRAGILSISQGQKHAGQALGMTYWQNMSIVI 97 Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375 LPQA R+++P +Q + L ++++L A+ L++ + N G E ++ Y Sbjct: 98 LPQAFRNMLPVFLTQIIILFQDTTLVYAISGNSLLNGFDIVSNNFGVKQEAYILAAIFYF 157 Query: 376 SLSIMIALFMNRLNAKIAL 394 + ++ ++ L KI++ Sbjct: 158 VICFTLSQIVSFLQKKISI 176 >gi|315122675|ref|YP_004063164.1| general L-amino acid transport system permease protein [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313496077|gb|ADR52676.1| general L-amino acid transport system permease protein [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 386 Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 26/82 (31%), Positives = 54/82 (65%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + ++ + +A+IAE+ R GL ++ +GQ EAA +LGL + + R +++PQ ++ +IP + + Sbjct: 254 LGVAAFASAYIAEVFRGGLQSISKGQFEAANSLGLNYFQTMRFIIIPQTIKRVIPGIVNT 313 Query: 331 YLNLLKNSSLAVAVGFADLVSV 352 ++ L K+S+L + D++ V Sbjct: 314 FIGLFKDSTLISIINMFDILGV 335 >gi|302186712|ref|ZP_07263385.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. syringae 642] Length = 225 Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 39/103 (37%), Positives = 57/103 (55%), Gaps = 3/103 (2%) Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 +A+ AEI+RS LI V +GQ +A AL A R ++LPQA+ +IPP+ +Q + LLK Sbjct: 103 SAYGAEIIRSALINVSQGQRDAVRALDFGPISAFRRIILPQALPFMIPPMGNQLVELLKT 162 Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380 +SL + DL G +I GQ LIW + + +M Sbjct: 163 TSLVSLITLTDLTFTGSQLITTLGQQ---TLIWSIVLVCYFVM 202 >gi|293409237|ref|ZP_06652813.1| arginine transporter permease subunit ArtQ [Escherichia coli B354] gi|331672401|ref|ZP_08373192.1| arginine transport system permease protein ArtQ [Escherichia coli TA280] gi|284920715|emb|CBG33778.1| arginine ABC transporter, permease protein [Escherichia coli 042] gi|291469705|gb|EFF12189.1| arginine transporter permease subunit ArtQ [Escherichia coli B354] gi|331070596|gb|EGI41960.1| arginine transport system permease protein ArtQ [Escherichia coli TA280] Length = 238 Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 55/186 (29%), Positives = 95/186 (51%), Gaps = 8/186 (4%) Query: 217 KALPLLYISTFLIFGLPTLVLI---ALKYQLHFDK-PVLGQFNFIGGSTVSPEFMSLYIA 272 + LP + + F+ FG L+L L F + PV Q + I VSP F+ IA Sbjct: 55 RGLPEILVVLFIYFGSSQLLLTLSDGFTINLGFVQIPV--QMD-IENFDVSP-FLCGVIA 110 Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 LS AA+ ++ +R L AVP GQ E+ ALGL+ +++PQ R +P L +Q+L Sbjct: 111 LSLLYAAYASQTLRGALKAVPVGQWESGQALGLSKSAIFFRLVMPQMWRHALPGLGNQWL 170 Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 LLK+++L + DL+ +I +T + ++ IYL ++++ + R++ + Sbjct: 171 VLLKDTALVSLISVNDLMLQTKSIATRTQEPFTWYIVAAAIYLVITLLSQYILKRIDLRA 230 Query: 393 ALKEKK 398 E++ Sbjct: 231 TRFERR 236 >gi|257485080|ref|ZP_05639121.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tabaci ATCC 11528] gi|289625714|ref|ZP_06458668.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289646323|ref|ZP_06477666.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. aesculi str. 2250] gi|289672939|ref|ZP_06493829.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. syringae FF5] gi|330869651|gb|EGH04360.1| amino acid ABC transporter permease [Pseudomonas syringae pv. aesculi str. 0893_23] gi|330890405|gb|EGH23066.1| amino acid ABC transporter permease [Pseudomonas syringae pv. mori str. 301020] gi|330982502|gb|EGH80605.1| amino acid ABC transporter permease [Pseudomonas syringae pv. aptata str. DSM 50252] gi|330987289|gb|EGH85392.1| amino acid ABC transporter permease [Pseudomonas syringae pv. lachrymans str. M301315] gi|331010993|gb|EGH91049.1| amino acid ABC transporter permease [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 225 Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 39/103 (37%), Positives = 57/103 (55%), Gaps = 3/103 (2%) Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 +A+ AEI+RS LI V +GQ +A AL A R ++LPQA+ +IPP+ +Q + LLK Sbjct: 103 SAYGAEIIRSALINVSQGQRDAVRALDFGPISAFRRIILPQALPFMIPPMGNQLVELLKT 162 Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380 +SL + DL G +I GQ LIW + + +M Sbjct: 163 TSLVSLITLTDLTFTGSQLITTLGQQ---TLIWSIVLVCYFVM 202 >gi|187923718|ref|YP_001895360.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia phytofirmans PsJN] gi|187714912|gb|ACD16136.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia phytofirmans PsJN] Length = 219 Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 53/209 (25%), Positives = 101/209 (48%), Gaps = 18/209 (8%) Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249 +F + G VL+L H + + +Y+S ++ G P LV I + +++ P Sbjct: 29 MIFGLIAGAVLALMGVS-----HNRVLNWIARIYVS--VMRGTPLLVQI---FVIYYGLP 78 Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309 G ++ P + IALS AA+++E +R ++ + GQ AA +LGL+ R+ Sbjct: 79 SFG-------ISLDPTPAGV-IALSANVAAYLSESMRGAILGIHNGQWLAAYSLGLSRRQ 130 Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369 R V+ PQA+R +P +++ ++L+K++SL + +L+ II T Q + + L Sbjct: 131 TLRYVIAPQALRIAVPSMSNSLISLIKDTSLVSVITVTELLRSAQEIIASTYQPLPLYLA 190 Query: 370 WMFIYLSLSIMIALFMNRLNAKIALKEKK 398 +Y L ++ ++AL + Sbjct: 191 AAAVYWVLCQVLESVQRWYERRLALPSRH 219 Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust. Identities = 28/78 (35%), Positives = 39/78 (50%), Gaps = 4/78 (5%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151 G V T A MI I G ++ +S N+++ WI R+YV V R P LV IF +Y Sbjct: 17 GAVLTVKFAVLSMIFGLIAGAVLALMGVSHNRVLNWIARIYVSVMRGTPLLVQIFVIYYG 76 Query: 152 V----LSVLPIPDHSIVL 165 + +S+ P P I L Sbjct: 77 LPSFGISLDPTPAGVIAL 94 >gi|255527439|ref|ZP_05394312.1| polar amino acid ABC transporter, inner membrane subunit [Clostridium carboxidivorans P7] gi|296187468|ref|ZP_06855863.1| ABC transporter, permease protein [Clostridium carboxidivorans P7] gi|255508885|gb|EET85252.1| polar amino acid ABC transporter, inner membrane subunit [Clostridium carboxidivorans P7] gi|296047990|gb|EFG87429.1| ABC transporter, permease protein [Clostridium carboxidivorans P7] Length = 235 Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 43/143 (30%), Positives = 82/143 (57%), Gaps = 4/143 (2%) Query: 259 GSTVSPEFMS-LYIALSCYT---AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLV 314 G VSP +S + IAL +T AA+++E +RS L +V +GQ+EAA ++G+T +A R + Sbjct: 90 GWKVSPNGISHISIALIAFTLNAAAYLSENIRSALSSVNKGQLEAAYSIGMTSFEAYRRI 149 Query: 315 LLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374 +LPQA+ + +P ++ ++ + K++SLA +V ++++V + +E L IY Sbjct: 150 ILPQALVAALPNFSNVFIQITKDTSLAFSVMVVEIMAVSSVEAASGYKYLEAYLDAAIIY 209 Query: 375 LSLSIMIALFMNRLNAKIALKEK 397 + + A L ++ + +K Sbjct: 210 FIVCYIFAKLFTALENRLKVYKK 232 >gi|257067919|ref|YP_003154174.1| amino acid ABC transporter membrane protein [Brachybacterium faecium DSM 4810] gi|256558737|gb|ACU84584.1| amino acid ABC transporter membrane protein [Brachybacterium faecium DSM 4810] Length = 219 Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 38/121 (31%), Positives = 66/121 (54%) Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 L + ++AE+ R+G+ +VP GQ EAA AL L + R V++PQA+R+ +P L + + Sbjct: 99 LGIHYTTYMAEVYRAGIDSVPTGQWEAATALSLPRVRTWRAVVVPQAIRNTLPALGNYAI 158 Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 ++ K + V + +LV V + + E I + I+L+ S +L + RL K+ Sbjct: 159 SMFKETPFFVVIYIPELVRVAQQYGSSYFRYTEAITLAGLIFLAASYPTSLLIRRLEKKL 218 Query: 393 A 393 A Sbjct: 219 A 219 >gi|167841347|ref|ZP_02468031.1| amino acid ABC transporter, permease/ATP-binding protein, His/Glu/Gln/Arg/opine family [Burkholderia thailandensis MSMB43] Length = 294 Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 45/139 (32%), Positives = 80/139 (57%), Gaps = 6/139 (4%) Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH-RKATRLVLLPQAM 320 +SP F + + L+ AAF AE +R G+++V +GQ+EAA ALGL R+ATR+V LPQAM Sbjct: 100 ISP-FCAAVLGLTLNHAAFAAEGIRGGILSVDQGQLEAAAALGLPRVRQATRIV-LPQAM 157 Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL---IWMFIYLSL 377 R+ +P + ++L K +S+ + +L I + + I +++ +W I L++ Sbjct: 158 RAFLPVAFNDLISLAKGTSMVYVLAMPELFYTVQVIYRRNLEVIPLLMVATVWYLIILTV 217 Query: 378 SIMIALFMNRLNAKIALKE 396 ++ + R A+ A++ Sbjct: 218 LSIVQAQVERRYARGAVRH 236 >gi|163815177|ref|ZP_02206558.1| hypothetical protein COPEUT_01335 [Coprococcus eutactus ATCC 27759] gi|158449586|gb|EDP26581.1| hypothetical protein COPEUT_01335 [Coprococcus eutactus ATCC 27759] Length = 236 Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 37/142 (26%), Positives = 80/142 (56%), Gaps = 2/142 (1%) Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316 +GG + L L+ + A+I+EI+R G+++V GQME A+GL+ +++ Sbjct: 96 VGGHMTGVQVAMLVFGLN--SGAYISEIMRGGILSVDPGQMEGGRAMGLSFSTTMLKIVI 153 Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376 PQA+++I+P L +++++L+K +S+ VG DL I + + + + L+ IY+ Sbjct: 154 PQAVKNILPTLGNEFISLIKETSVVSFVGATDLYVAFNYIGSNSYEFMVPYLVMALIYIV 213 Query: 377 LSIMIALFMNRLNAKIALKEKK 398 + ++I+L + + + +++ Sbjct: 214 MVLLISLGIKLMERSLRKSDRR 235 >gi|240850318|ref|YP_002971711.1| amino acid ABC transporter, permease protein [Bartonella grahamii as4aup] gi|240267441|gb|ACS51029.1| amino acid ABC transporter, permease protein [Bartonella grahamii as4aup] Length = 240 Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 53/187 (28%), Positives = 89/187 (47%), Gaps = 5/187 (2%) Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQ--LHFDKPVLGQFNFIGGSTVSPEFMSLYI 271 K KA+ L+ + F GLP L+ + L Y + V FNF +++ F++ + Sbjct: 53 KMAKAMARLFSTVFR--GLPELLTLFLVYYGLQSLIQNVFDYFNFEIMFSINA-FVAGVL 109 Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 ALS AAF E+ +GQ EAA ALGL+ ++ PQ +R+ +P L++ + Sbjct: 110 ALSMVLAAFSCEVWLGAFNIFDKGQYEAAKALGLSRSTTFFRIVFPQLIRNALPGLSNNW 169 Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 L LLK++SL + DL+ + T + + L+ +YL S + + L Sbjct: 170 LTLLKDTSLVSTIALVDLMRQTNLAVAATNKPMLFYLVACLLYLLFSAVFTAILRHLETY 229 Query: 392 IALKEKK 398 + +KK Sbjct: 230 TQIGDKK 236 >gi|212704551|ref|ZP_03312679.1| hypothetical protein DESPIG_02611 [Desulfovibrio piger ATCC 29098] gi|212671950|gb|EEB32433.1| hypothetical protein DESPIG_02611 [Desulfovibrio piger ATCC 29098] Length = 275 Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 46/179 (25%), Positives = 91/179 (50%), Gaps = 13/179 (7%) Query: 216 GKALPLLYISTFLIF--GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273 G AL + ++ F G+P LVL+ L L G + P +S + + Sbjct: 84 GNALARRLVGLYVWFFRGVPILVLLFLSQGLFLSM----------GWILEPFLLSCLV-M 132 Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333 C + A+ ++I R + ++P+GQ++AA ALG+ A ++LPQA+R IP +++ Sbjct: 133 GCISTAYQSQIFRGAIESLPQGQLKAARALGMRDMTAITCIILPQALRLSIPGWANEFSI 192 Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 LLK+S++ +G ++++ + +T + + + IY L++++ + RL K+ Sbjct: 193 LLKDSAVCYLLGTMEIMARVNAVAQRTHEHLAFFALAGVIYFVLTLIVLKLLRRLENKV 251 >gi|220925011|ref|YP_002500313.1| polar amino acid ABC transporter inner membrane subunit [Methylobacterium nodulans ORS 2060] gi|219949618|gb|ACL60010.1| polar amino acid ABC transporter, inner membrane subunit [Methylobacterium nodulans ORS 2060] Length = 238 Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 49/155 (31%), Positives = 80/155 (51%), Gaps = 9/155 (5%) Query: 227 FLIFGLPTLVLIALKY----QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282 F+ G P LV + L Y Q + LG + F P + +L +ALS T A+ A Sbjct: 59 FVFRGTPLLVQLFLIYYGLGQFRYGLQALGLWWFF----REPYWCAL-LALSLNTGAYTA 113 Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342 EI R G++AVP G + A A G++ R V LP A R +P ++ ++++K ++LA Sbjct: 114 EIFRGGVLAVPHGALLAGRACGMSRLTLLRRVTLPLAARQALPAYGNEIISVVKATALAS 173 Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377 + +L + +I Q+ +A+EI L YL++ Sbjct: 174 TITILELTGIAQKLIAQSFRALEIFLCAAAFYLAI 208 >gi|322369616|ref|ZP_08044180.1| ABC-type transport system permease protein (probable substrate glutamine) [Haladaptatus paucihalophilus DX253] gi|320550786|gb|EFW92436.1| ABC-type transport system permease protein (probable substrate glutamine) [Haladaptatus paucihalophilus DX253] Length = 272 Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 35/128 (27%), Positives = 74/128 (57%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I LS AA+ E ++ G+ ++P GQMEAA +LG+++ A R ++LPQA R+ + + + Sbjct: 145 IGLSLNHAAYSGEAIKGGINSIPDGQMEAARSLGMSYISAMRKIILPQAFRNSLAAVGND 204 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 + L+K++SL + ++L+S+ + + A +++ YL++++ + + L Sbjct: 205 QIILVKDTSLLSVIAVSELISLFRNVNSNQFDAWTPLVLVAIAYLAITLPLGKLVRMLEE 264 Query: 391 KIALKEKK 398 + A E++ Sbjct: 265 RAAWGEQR 272 >gi|167041374|gb|ABZ06127.1| putative binding-protein-dependent transport system inner membrane component [uncultured marine microorganism HF4000_005K23] Length = 420 Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 27/83 (32%), Positives = 56/83 (67%) Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315 F+ T + + + IA++ + AA++AE++R GL A+P+GQ +A+ +LG+ + + L++ Sbjct: 277 FLPDGTYMDKLVRVIIAITLFEAAYMAEVIRGGLQALPKGQYDASKSLGMGYWRMHLLII 336 Query: 316 LPQAMRSIIPPLTSQYLNLLKNS 338 LPQA++ IP + + ++ L K++ Sbjct: 337 LPQALKITIPGIANTFIALFKDT 359 >gi|83746650|ref|ZP_00943699.1| Hypothetical Protein RRSL_03560 [Ralstonia solanacearum UW551] gi|207739615|ref|YP_002258008.1| amino acid transmembrane protein [Ralstonia solanacearum IPO1609] gi|83726603|gb|EAP73732.1| Hypothetical Protein RRSL_03560 [Ralstonia solanacearum UW551] gi|206592995|emb|CAQ59901.1| amino acid transmembrane protein [Ralstonia solanacearum IPO1609] Length = 259 Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 37/96 (38%), Positives = 63/96 (65%), Gaps = 1/96 (1%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 PE ++ AL+ AA+IA+ +++GL AV GQ AA+ALG++ +A V+LPQA R + Sbjct: 101 PETATVVTALATVGAAYIAQSMQAGLRAVGTGQRNAALALGMSPGQALLAVVLPQAWRIM 160 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359 +P + +Q+++ +K++SLA VG +L S + +N Sbjct: 161 LPSVANQWVSTVKDTSLAYIVGVVEL-STAASQVNS 195 >gi|330969960|gb|EGH70026.1| amino acid ABC transporter permease [Pseudomonas syringae pv. aceris str. M302273PT] Length = 197 Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 39/103 (37%), Positives = 57/103 (55%), Gaps = 3/103 (2%) Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 +A+ AEI+RS LI V +GQ +A AL A R ++LPQA+ +IPP+ +Q + LLK Sbjct: 75 SAYGAEIIRSALINVSQGQRDALRALDFGPINAFRRIILPQALPFMIPPMGNQLVELLKT 134 Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380 +SL + DL G +I GQ LIW + + +M Sbjct: 135 TSLVSLITLTDLTFTGSQLITTLGQQ---TLIWSIVLVCYFVM 174 >gi|260575377|ref|ZP_05843376.1| polar amino acid ABC transporter, inner membrane subunit [Rhodobacter sp. SW2] gi|259022297|gb|EEW25594.1| polar amino acid ABC transporter, inner membrane subunit [Rhodobacter sp. SW2] Length = 295 Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 40/84 (47%), Positives = 56/84 (66%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+S A+ Y AAFIAEI+R+G+ AV GQMEAA ALG+ A R V+LPQA+ + Sbjct: 165 FLSAAAAIGLYAAAFIAEIIRAGVNAVGTGQMEAAQALGMGWASAMRRVILPQALARVWA 224 Query: 326 PLTSQYLNLLKNSSLAVAVGFADL 349 PL ++++ ++K S+LA V DL Sbjct: 225 PLANEFILMIKFSALASLVSVPDL 248 Score = 39.3 bits (90), Expect = 1.0, Method: Compositional matrix adjust. Identities = 23/61 (37%), Positives = 33/61 (54%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 IL+G T LA G + A ++G +G R+ + + VYV + RNIPPLV +F Sbjct: 64 ILLGLFTTLRLALWGGVVALVVGLAIGLMRVVPSPTARTLAAVYVGLIRNIPPLVFLFIF 123 Query: 149 Y 149 Y Sbjct: 124 Y 124 >gi|296103153|ref|YP_003613299.1| arginine transporter permease subunit ArtQ [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295057612|gb|ADF62350.1| arginine transporter permease subunit ArtQ [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 238 Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 53/187 (28%), Positives = 98/187 (52%), Gaps = 10/187 (5%) Query: 217 KALPLLYISTFLIFGLPTLVL-IALKYQLHF---DKPVLGQF-NFIGGSTVSPEFMSLYI 271 + LP + + F+ FG L+L ++ + L+ PV Q NF VSP F+ I Sbjct: 55 RGLPEILVVLFIYFGSSQLLLTLSDGFTLNLGVVQIPVQMQIENF----DVSP-FLCGVI 109 Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 ALS +A+ ++ +R L AVP+GQ E+ ALG++ +++PQ R +P L +Q+ Sbjct: 110 ALSLLYSAYASQTLRGALKAVPQGQWESGQALGMSKAAIFFRLVMPQMWRHALPGLGNQW 169 Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 L LLK+++L + DL+ +I +T + ++ IYL ++++ + R++ + Sbjct: 170 LVLLKDTALVSLISVNDLMLQTKSIATRTQEPFTWYIVAAAIYLVITLLSQYILKRIDLR 229 Query: 392 IALKEKK 398 E++ Sbjct: 230 ATRFERR 236 >gi|218133963|ref|ZP_03462767.1| hypothetical protein BACPEC_01852 [Bacteroides pectinophilus ATCC 43243] gi|217991338|gb|EEC57344.1| hypothetical protein BACPEC_01852 [Bacteroides pectinophilus ATCC 43243] Length = 230 Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 32/79 (40%), Positives = 53/79 (67%) Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 T A++AE VR+G+ ++ GQ E A+ALG++ KA +V++PQA R+IIP + + +L LK Sbjct: 98 TGAYMAETVRAGIKSIDVGQREGALALGMSPLKAMVVVIIPQAFRNIIPEMANMFLTNLK 157 Query: 337 NSSLAVAVGFADLVSVGGT 355 +S+ +G ++L V T Sbjct: 158 MTSVLNVIGVSELFLVAKT 176 >gi|42519234|ref|NP_965164.1| ABC transporter permease component [Lactobacillus johnsonii NCC 533] gi|41583522|gb|AAS09130.1| ABC transporter permease component [Lactobacillus johnsonii NCC 533] gi|329667256|gb|AEB93204.1| ABC transporter permease component [Lactobacillus johnsonii DPC 6026] Length = 225 Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 61/213 (28%), Positives = 111/213 (52%), Gaps = 20/213 (9%) Query: 185 TNAKIFVFSFVLGIVL-SLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243 T+ I V S ++G+ L +LF + R + K + +Y+ F I +PT+VL+ L Y Sbjct: 24 TSVWIAVLSLIIGLALGALFG--VLRTSKSRLVKVIFRIYLEFFRI--VPTVVLLFLFYY 79 Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 + + QFN ++V M++ IA + + +A ++IVR LI+VP+ Q E+ +AL Sbjct: 80 I-----LPRQFNLNWPASV----MAV-IAFALWVSAEFSDIVRGALISVPKIQRESGLAL 129 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363 GL + VLLPQA + +P + ++K +SL + + D+++VG I+ Q Sbjct: 130 GLNKWQLFIYVLLPQAFQLELPATINLATRVIKTTSLLMMISVMDVINVGQQIVEANNQT 189 Query: 364 IEIILIWM-----FIYLSLSIMIALFMNRLNAK 391 + W+ F+Y + ++L+ RL+ + Sbjct: 190 NPNGVFWVYGLIFFLYFIVDYPLSLWAKRLSKR 222 Score = 42.7 bits (99), Expect = 0.092, Method: Compositional matrix adjust. Identities = 23/63 (36%), Positives = 36/63 (57%) Query: 87 TAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIF 146 T +L G + W+A +I +G L G R S ++LV I R+Y+E FR +P +V++F Sbjct: 16 TRLLGGLWTSVWIAVLSLIIGLALGALFGVLRTSKSRLVKVIFRIYLEFFRIVPTVVLLF 75 Query: 147 FLY 149 Y Sbjct: 76 LFY 78 >gi|330950462|gb|EGH50722.1| amino acid ABC transporter permease [Pseudomonas syringae Cit 7] Length = 225 Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 39/103 (37%), Positives = 57/103 (55%), Gaps = 3/103 (2%) Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 +A+ AEI+RS LI V +GQ +A AL A R ++LPQA+ +IPP+ +Q + LLK Sbjct: 103 SAYGAEIIRSALINVSQGQRDAVRALDFGPISAFRRIILPQALPFMIPPMGNQLVELLKT 162 Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380 +SL + DL G +I GQ LIW + + +M Sbjct: 163 TSLVSLITLTDLTFTGSQLITTLGQQ---TLIWSIVLVCYFVM 202 >gi|331266848|ref|YP_004326478.1| ABC transporter membrane-spanning permease,polar amino acid transport system; glutamine transport,putative [Streptococcus oralis Uo5] gi|326683520|emb|CBZ01138.1| ABC transporter membrane-spanning permease,polar amino acid transport system; glutamine transport,putative [Streptococcus oralis Uo5] Length = 219 Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 29/73 (39%), Positives = 51/73 (69%) Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 A + +T+A +AEI+R GL AV +GQ EA ++ G T + ++LPQA+R ++P + SQ+ Sbjct: 90 AFTLFTSAALAEIIRGGLNAVDKGQYEAGMSQGFTSVQILYYIILPQAIRKMLPAIISQF 149 Query: 332 LNLLKNSSLAVAV 344 + ++K++SL +V Sbjct: 150 VTVIKDTSLLYSV 162 Score = 37.0 bits (84), Expect = 5.0, Method: Compositional matrix adjust. Identities = 19/61 (31%), Positives = 36/61 (59%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 I GF T +++ ++ +T+IGT++ R N ++ I +Y+E RN+P L+ IF + Sbjct: 16 IFKGFGLTLYISLIAIVLSTLIGTVLAVMRNGKNPVLRIISSIYIEFVRNVPNLLWIFTI 75 Query: 149 Y 149 + Sbjct: 76 F 76 >gi|283784629|ref|YP_003364494.1| arginine ABC transporter, permease protein [Citrobacter rodentium ICC168] gi|282948083|emb|CBG87648.1| arginine ABC transporter, permease protein [Citrobacter rodentium ICC168] Length = 238 Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 43/137 (31%), Positives = 75/137 (54%), Gaps = 1/137 (0%) Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321 VSP F+ IALS AA+ ++ +R L AVP GQ E+ ALGL+ +++PQ R Sbjct: 101 VSP-FLCGVIALSLLYAAYASQTLRGALKAVPVGQWESGQALGLSKTAIFFRLVMPQMWR 159 Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 +P L +Q+L LLK+++L + DL+ +I +T + +I IYL ++++ Sbjct: 160 HALPGLGNQWLVLLKDTALVSLISVNDLMLQTKSIATRTQEPFNWYIIAAAIYLVITLIS 219 Query: 382 ALFMNRLNAKIALKEKK 398 + R++ + E++ Sbjct: 220 QYILRRIDLRATRFERR 236 >gi|71735859|ref|YP_274486.1| amino acid ABC transporter permease [Pseudomonas syringae pv. phaseolicola 1448A] gi|71556412|gb|AAZ35623.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. phaseolicola 1448A] gi|320328872|gb|EFW84871.1| amino acid ABC transporter, permease protein [Pseudomonas syringae pv. glycinea str. race 4] Length = 225 Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 39/103 (37%), Positives = 57/103 (55%), Gaps = 3/103 (2%) Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 +A+ AEI+RS LI V +GQ +A AL A R ++LPQA+ +IPP+ +Q + LLK Sbjct: 103 SAYGAEIIRSALINVSQGQRDAVRALDFGPISAFRRIILPQALPFMIPPMGNQLVELLKT 162 Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380 +SL + DL G +I GQ LIW + + +M Sbjct: 163 TSLVSLITLTDLTFTGSQLITTLGQQ---TLIWSIVLVCYFVM 202 >gi|121603938|ref|YP_981267.1| polar amino acid ABC transporter inner membrane subunit [Polaromonas naphthalenivorans CJ2] gi|120592907|gb|ABM36346.1| amino acid ABC transporter membrane protein, PAAT family [Polaromonas naphthalenivorans CJ2] Length = 216 Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 52/164 (31%), Positives = 85/164 (51%), Gaps = 11/164 (6%) Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287 L+ G+P +V++ + L+F P +G I S + + L IA S Y A E R+ Sbjct: 61 LLRGIPIIVIL---FFLYFVMPDVG----ISLSALQAGILGLGIAYSAYQA----ENFRA 109 Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347 G+ AV GQ+EAA A+G+ R V+LPQA++ ++PP + + +LK+SS A + A Sbjct: 110 GIEAVDHGQVEAARAMGMGWGLMMRRVVLPQAVKIVLPPYGNIMIMMLKDSSQASTITVA 169 Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 +L G I T Q + + IYL + + + L + L + Sbjct: 170 ELALQGKMIATSTFQNATVFTLVALIYLVMCVPLILLVRHLEKR 213 >gi|171778289|ref|ZP_02919495.1| hypothetical protein STRINF_00337 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] gi|171282989|gb|EDT48413.1| hypothetical protein STRINF_00337 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] Length = 242 Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 29/84 (34%), Positives = 53/84 (63%) Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329 Y+ T ++EI+RS ++ V +GQ+EAA+A+GLT ++A ++ PQA+R +P L + Sbjct: 116 YVIFGLMTTGSLSEIIRSAILTVNKGQLEAALAIGLTAKQAYLRIVFPQAIRQALPNLCN 175 Query: 330 QYLNLLKNSSLAVAVGFADLVSVG 353 +NL+K +SL + D+ ++ Sbjct: 176 LVINLVKGTSLVFVMTVKDITAIA 199 >gi|146305345|ref|YP_001185810.1| polar amino acid ABC transporter, inner membrane subunit [Pseudomonas mendocina ymp] gi|145573546|gb|ABP83078.1| amino acid ABC transporter membrane protein 2, PAAT family [Pseudomonas mendocina ymp] Length = 215 Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 34/102 (33%), Positives = 61/102 (59%), Gaps = 1/102 (0%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G VSP +++ AL+ +T+AF+AEI R + ++ RGQ EA+ +L ++ + R V+LPQ Sbjct: 79 GVDVSP-WLAAATALTLFTSAFLAEIWRGCVESIGRGQWEASESLAMSRLETLRHVVLPQ 137 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 A+R + P + ++K +++ +GF +L G + N T Sbjct: 138 ALRIAVAPTVGFSVQVIKGTAVTSIIGFTELTKTGSMLANAT 179 >gi|29375693|ref|NP_814847.1| amino acid ABC transporter, permease protein [Enterococcus faecalis V583] gi|227518372|ref|ZP_03948421.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus faecalis TX0104] gi|227552901|ref|ZP_03982950.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus faecalis HH22] gi|229550389|ref|ZP_04439114.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus faecalis ATCC 29200] gi|293383316|ref|ZP_06629231.1| amino acid ABC transporter, permease protein [Enterococcus faecalis R712] gi|293387527|ref|ZP_06632076.1| amino acid ABC transporter, permease protein [Enterococcus faecalis S613] gi|294780988|ref|ZP_06746340.1| ABC transporter, permease protein [Enterococcus faecalis PC1.1] gi|300859666|ref|ZP_07105754.1| ABC transporter, permease protein [Enterococcus faecalis TUSoD Ef11] gi|307268769|ref|ZP_07550137.1| ABC transporter, permease protein [Enterococcus faecalis TX4248] gi|307273808|ref|ZP_07555030.1| ABC transporter, permease protein [Enterococcus faecalis TX0855] gi|307274581|ref|ZP_07555761.1| ABC transporter, permease protein [Enterococcus faecalis TX2134] gi|307278847|ref|ZP_07559910.1| ABC transporter, permease protein [Enterococcus faecalis TX0860] gi|307288578|ref|ZP_07568562.1| ABC transporter, permease protein [Enterococcus faecalis TX0109] gi|312899592|ref|ZP_07758918.1| ABC transporter, permease protein [Enterococcus faecalis TX0470] gi|312903650|ref|ZP_07762826.1| ABC transporter, permease protein [Enterococcus faecalis TX0635] gi|312905823|ref|ZP_07764843.1| ABC transporter, permease protein [Enterococcus faecalis DAPTO 512] gi|312909122|ref|ZP_07767981.1| ABC transporter, permease protein [Enterococcus faecalis DAPTO 516] gi|312951369|ref|ZP_07770267.1| ABC transporter, permease protein [Enterococcus faecalis TX0102] gi|29343154|gb|AAO80917.1| amino acid ABC transporter, permease protein [Enterococcus faecalis V583] gi|227074050|gb|EEI12013.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus faecalis TX0104] gi|227177973|gb|EEI58945.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus faecalis HH22] gi|229304511|gb|EEN70507.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus faecalis ATCC 29200] gi|291079339|gb|EFE16703.1| amino acid ABC transporter, permease protein [Enterococcus faecalis R712] gi|291083037|gb|EFE20000.1| amino acid ABC transporter, permease protein [Enterococcus faecalis S613] gi|294451934|gb|EFG20384.1| ABC transporter, permease protein [Enterococcus faecalis PC1.1] gi|295112701|emb|CBL31338.1| amino acid ABC transporter membrane protein 2, PAAT family (TC 3.A.1.3.-) [Enterococcus sp. 7L76] gi|300850484|gb|EFK78233.1| ABC transporter, permease protein [Enterococcus faecalis TUSoD Ef11] gi|306500485|gb|EFM69818.1| ABC transporter, permease protein [Enterococcus faecalis TX0109] gi|306504518|gb|EFM73725.1| ABC transporter, permease protein [Enterococcus faecalis TX0860] gi|306508733|gb|EFM77823.1| ABC transporter, permease protein [Enterococcus faecalis TX2134] gi|306509493|gb|EFM78541.1| ABC transporter, permease protein [Enterococcus faecalis TX0855] gi|306514897|gb|EFM83444.1| ABC transporter, permease protein [Enterococcus faecalis TX4248] gi|310628162|gb|EFQ11445.1| ABC transporter, permease protein [Enterococcus faecalis DAPTO 512] gi|310630629|gb|EFQ13912.1| ABC transporter, permease protein [Enterococcus faecalis TX0102] gi|310633003|gb|EFQ16286.1| ABC transporter, permease protein [Enterococcus faecalis TX0635] gi|311290546|gb|EFQ69102.1| ABC transporter, permease protein [Enterococcus faecalis DAPTO 516] gi|311293271|gb|EFQ71827.1| ABC transporter, permease protein [Enterococcus faecalis TX0470] gi|315028074|gb|EFT40006.1| ABC transporter, permease protein [Enterococcus faecalis TX2137] gi|315031595|gb|EFT43527.1| ABC transporter, permease protein [Enterococcus faecalis TX0017] gi|315034963|gb|EFT46895.1| ABC transporter, permease protein [Enterococcus faecalis TX0027] gi|315148454|gb|EFT92470.1| ABC transporter, permease protein [Enterococcus faecalis TX4244] gi|315150403|gb|EFT94419.1| ABC transporter, permease protein [Enterococcus faecalis TX0012] gi|315153640|gb|EFT97656.1| ABC transporter, permease protein [Enterococcus faecalis TX0031] gi|315156542|gb|EFU00559.1| ABC transporter, permease protein [Enterococcus faecalis TX0043] gi|315158368|gb|EFU02385.1| ABC transporter, permease protein [Enterococcus faecalis TX0312] gi|315160939|gb|EFU04956.1| ABC transporter, permease protein [Enterococcus faecalis TX0645] gi|315165528|gb|EFU09545.1| ABC transporter, permease protein [Enterococcus faecalis TX1302] gi|315170968|gb|EFU14985.1| ABC transporter, permease protein [Enterococcus faecalis TX1342] gi|315573709|gb|EFU85900.1| ABC transporter, permease protein [Enterococcus faecalis TX0309B] gi|315577478|gb|EFU89669.1| ABC transporter, permease protein [Enterococcus faecalis TX0630] gi|315582676|gb|EFU94867.1| ABC transporter, permease protein [Enterococcus faecalis TX0309A] gi|327534748|gb|AEA93582.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus faecalis OG1RF] gi|329576392|gb|EGG57905.1| putative glutamine ABC transporter permease protein GlnP [Enterococcus faecalis TX1467] Length = 221 Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 39/127 (30%), Positives = 72/127 (56%), Gaps = 4/127 (3%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 ++ + +T A +AEI+R GL V +GQ+EAA + G ++ + ++LPQA+R+++P + SQ Sbjct: 92 VSFTVFTTAALAEIIRGGLNGVDKGQIEAARSQGFSNWQILYHIVLPQAIRNVLPAIVSQ 151 Query: 331 YLNLLKNSS-LAVAVGFADLVSVGGTIIN---QTGQAIEIILIWMFIYLSLSIMIALFMN 386 ++ ++K++S L + +L ++ QTGQ I I IY ++ I+ F Sbjct: 152 FVTVIKDTSFLYSVIALQELFGKSYILMGRYAQTGQVFTIYGIVALIYFIINFSISQFSR 211 Query: 387 RLNAKIA 393 L+ A Sbjct: 212 WLSRNWA 218 Score = 36.2 bits (82), Expect = 9.9, Method: Compositional matrix adjust. Identities = 21/58 (36%), Positives = 35/58 (60%), Gaps = 3/58 (5%) Query: 96 TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV---VIFFLYK 150 T +++F +I +TI GT++ R + + + +YVEV RNIP L+ VIF ++K Sbjct: 26 TLYISFVSIILSTIFGTILAVLRNQTHGPLKLLASIYVEVVRNIPNLLWIYVIFLIFK 83 >gi|107023049|ref|YP_621376.1| amino acid ABC transporter permease [Burkholderia cenocepacia AU 1054] gi|116686710|ref|YP_839957.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia cenocepacia HI2424] gi|170735479|ref|YP_001774593.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia cenocepacia MC0-3] gi|105893238|gb|ABF76403.1| amino acid ABC transporter membrane protein 1, PAAT family [Burkholderia cenocepacia AU 1054] gi|116652425|gb|ABK13064.1| amino acid ABC transporter membrane protein 1, PAAT family [Burkholderia cenocepacia HI2424] gi|169821517|gb|ACA96098.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia cenocepacia MC0-3] Length = 228 Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 42/139 (30%), Positives = 69/139 (49%), Gaps = 24/139 (17%) Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286 F+ FGLP L +H D E+ + +A++ A+ EIVR Sbjct: 78 FIFFGLPAL-------GVHID-----------------EYTAAILAMTLNLGAYSVEIVR 113 Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346 +G+ AVP+G +EAA AL ++ + R V+LPQA+ + P L+SQ + + S++ + Sbjct: 114 AGVAAVPKGHLEAASALAMSRAQMLRHVVLPQALAKVFPALSSQIVITMLGSAVVSQISV 173 Query: 347 ADLVSVGGTIINQTGQAIE 365 ADL I ++ +A E Sbjct: 174 ADLTYAASYIQSRNFRAFE 192 >gi|315168385|gb|EFU12402.1| ABC transporter, permease protein [Enterococcus faecalis TX1341] Length = 221 Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 39/127 (30%), Positives = 72/127 (56%), Gaps = 4/127 (3%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 ++ + +T A +AEI+R GL V +GQ+EAA + G ++ + ++LPQA+R+++P + SQ Sbjct: 92 VSFTVFTTAALAEIIRGGLNGVDKGQIEAARSQGFSNWQILYHIVLPQAIRNVLPAIVSQ 151 Query: 331 YLNLLKNSS-LAVAVGFADLVSVGGTIIN---QTGQAIEIILIWMFIYLSLSIMIALFMN 386 ++ ++K++S L + +L ++ QTGQ I I IY ++ I+ F Sbjct: 152 FVTVIKDTSFLYSVIALQELFGKSYILMGRYAQTGQVFTIYGIVALIYFIINFSISQFSR 211 Query: 387 RLNAKIA 393 L+ A Sbjct: 212 WLSRNWA 218 Score = 36.2 bits (82), Expect = 8.9, Method: Compositional matrix adjust. Identities = 21/58 (36%), Positives = 35/58 (60%), Gaps = 3/58 (5%) Query: 96 TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV---VIFFLYK 150 T +++F +I +TI GT++ R + + + +YVEV RNIP L+ VIF ++K Sbjct: 26 TLYISFVSIILSTIFGTILAVLRNQTHGPLKLLASIYVEVVRNIPNLLWIYVIFLIFK 83 >gi|255973160|ref|ZP_05423746.1| amino acid ABC transporter, permease [Enterococcus faecalis T1] gi|255976203|ref|ZP_05426789.1| amino acid ABC transporter permease [Enterococcus faecalis T2] gi|256618701|ref|ZP_05475547.1| polar amino acid ABC uptake transporter membrane-spanning protein [Enterococcus faecalis ATCC 4200] gi|256762125|ref|ZP_05502705.1| amino acid ABC transporter, permease [Enterococcus faecalis T3] gi|256958614|ref|ZP_05562785.1| polar amino acid ABC uptake transporter membrane-spanning protein [Enterococcus faecalis DS5] gi|256962287|ref|ZP_05566458.1| amino acid ABC transporter permease [Enterococcus faecalis Merz96] gi|256965482|ref|ZP_05569653.1| ABC-type amino acid transporter [Enterococcus faecalis HIP11704] gi|257078032|ref|ZP_05572393.1| amino acid ABC transporter permease [Enterococcus faecalis JH1] gi|257085622|ref|ZP_05579983.1| polar amino acid ABC uptake transporter membrane-spanning protein [Enterococcus faecalis Fly1] gi|257086472|ref|ZP_05580833.1| amino acid ABC transporter permease [Enterococcus faecalis D6] gi|257089529|ref|ZP_05583890.1| ABC polar amino acid transporter permease [Enterococcus faecalis CH188] gi|257415731|ref|ZP_05592725.1| amino acid ABC transporter permease [Enterococcus faecalis AR01/DG] gi|257422966|ref|ZP_05599956.1| ABC amino acid transporter [Enterococcus faecalis X98] gi|255964178|gb|EET96654.1| amino acid ABC transporter, permease [Enterococcus faecalis T1] gi|255969075|gb|EET99697.1| amino acid ABC transporter permease [Enterococcus faecalis T2] gi|256598228|gb|EEU17404.1| polar amino acid ABC uptake transporter membrane-spanning protein [Enterococcus faecalis ATCC 4200] gi|256683376|gb|EEU23071.1| amino acid ABC transporter, permease [Enterococcus faecalis T3] gi|256949110|gb|EEU65742.1| polar amino acid ABC uptake transporter membrane-spanning protein [Enterococcus faecalis DS5] gi|256952783|gb|EEU69415.1| amino acid ABC transporter permease [Enterococcus faecalis Merz96] gi|256955978|gb|EEU72610.1| ABC-type amino acid transporter [Enterococcus faecalis HIP11704] gi|256986062|gb|EEU73364.1| amino acid ABC transporter permease [Enterococcus faecalis JH1] gi|256993652|gb|EEU80954.1| polar amino acid ABC uptake transporter membrane-spanning protein [Enterococcus faecalis Fly1] gi|256994502|gb|EEU81804.1| amino acid ABC transporter permease [Enterococcus faecalis D6] gi|256998341|gb|EEU84861.1| ABC polar amino acid transporter permease [Enterococcus faecalis CH188] gi|257157559|gb|EEU87519.1| amino acid ABC transporter permease [Enterococcus faecalis ARO1/DG] gi|257164790|gb|EEU94750.1| ABC amino acid transporter [Enterococcus faecalis X98] gi|323480356|gb|ADX79795.1| ABC transporter, permease protein [Enterococcus faecalis 62] Length = 215 Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 39/127 (30%), Positives = 72/127 (56%), Gaps = 4/127 (3%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 ++ + +T A +AEI+R GL V +GQ+EAA + G ++ + ++LPQA+R+++P + SQ Sbjct: 86 VSFTVFTTAALAEIIRGGLNGVDKGQIEAARSQGFSNWQILYHIVLPQAIRNVLPAIVSQ 145 Query: 331 YLNLLKNSS-LAVAVGFADLVSVGGTIIN---QTGQAIEIILIWMFIYLSLSIMIALFMN 386 ++ ++K++S L + +L ++ QTGQ I I IY ++ I+ F Sbjct: 146 FVTVIKDTSFLYSVIALQELFGKSYILMGRYAQTGQVFTIYGIVALIYFIINFSISQFSR 205 Query: 387 RLNAKIA 393 L+ A Sbjct: 206 WLSRNWA 212 Score = 36.2 bits (82), Expect = 9.9, Method: Compositional matrix adjust. Identities = 21/58 (36%), Positives = 35/58 (60%), Gaps = 3/58 (5%) Query: 96 TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV---VIFFLYK 150 T +++F +I +TI GT++ R + + + +YVEV RNIP L+ VIF ++K Sbjct: 20 TLYISFVSIILSTIFGTILAVLRNQTHGPLKLLASIYVEVVRNIPNLLWIYVIFLIFK 77 >gi|116326668|ref|YP_796442.1| ABC-type amino acid transport system, permease component [Lactobacillus casei ATCC 334] gi|116106486|gb|ABJ71627.1| ABC-type amino acid transport system, permease component [Lactobacillus casei ATCC 334] Length = 229 Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 58/221 (26%), Positives = 103/221 (46%), Gaps = 32/221 (14%) Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240 +T+ A + +LGI+L + R F + + + LY+ F I +PT+VL+ L Sbjct: 24 VTVKIAAVALIVGLILGIILGVL-----RTFKNRPLRVVLRLYLEFFRI--VPTVVLLFL 76 Query: 241 KY-----QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295 Y QL+F+ P + +L AL + AA +++IVR L +VP+ Sbjct: 77 FYYILPRQLNFNLP-------------GDQLATLVFAL--WVAAEMSDIVRGALSSVPQH 121 Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355 Q E+ A+GL + R VL+PQA+ IP + ++K +SL + + D++++G Sbjct: 122 QRESGKAIGLNRYQLYRYVLIPQAISLEIPATINLATRVIKTTSLLMLISVMDVINIGQQ 181 Query: 356 IINQTGQAIEIILIWMF-----IYLSLSIMIALFMNRLNAK 391 II + W++ Y + ++ + RL K Sbjct: 182 IIEANNHTHPTGVFWVYGLIFLFYFLIDYPLSWWAKRLEKK 222 >gi|116255414|ref|YP_771247.1| putative permease component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] gi|115260062|emb|CAK03161.1| putative permease component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] Length = 234 Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 43/135 (31%), Positives = 76/135 (56%), Gaps = 4/135 (2%) Query: 251 LGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306 LGQF FI S + P + ++L+ TA + AEI R G+ AV ++EAA ++G++ Sbjct: 76 LGQFGFIRYSFLWPFLREPMVCAVLSLALCTAGYTAEIFRGGIRAVSPKEIEAARSIGMS 135 Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 R +L P A R +P +++ + ++K+++LA V ++ V +I+QT + +E+ Sbjct: 136 GFLLVRRILAPIAFRHALPAYSTEIVLMMKSTALASLVTVWEVTGVAQRLISQTYRTMEV 195 Query: 367 ILIWMFIYLSLSIMI 381 L IYL L+ +I Sbjct: 196 FLCAAIIYLVLNFII 210 >gi|116254798|ref|YP_770634.1| putative permease component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] gi|115259446|emb|CAK10584.1| putative permease component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] Length = 222 Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 35/107 (32%), Positives = 59/107 (55%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I LS Y AA+ +EI RSG AVP+G +EA I +GLT + R +LLP+ ++PP + Sbjct: 93 IGLSIYGAAYFSEIFRSGFAAVPKGHIEAGICVGLTQGQIIRRILLPEMTMLVLPPSVNM 152 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377 + L+K +++ + +L + I +Q +E + + Y +L Sbjct: 153 TVILMKETAVLSIITVPELTATLSAIGSQQYAFVEALFVLALFYWAL 199 >gi|23464652|ref|NP_695255.1| permease protein of ABC transporter for glutamate [Bifidobacterium longum NCC2705] gi|23325211|gb|AAN23891.1| permease protein of ABC transporter for glutamate [Bifidobacterium longum NCC2705] Length = 366 Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 31/89 (34%), Positives = 59/89 (66%) Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322 SP + ++ +AL Y + +AE+VRSG+ +P GQ EA++ALGLT ++ + +PQA+ + Sbjct: 141 SPSYWAVVLALVLYNGSVVAELVRSGVGNLPGGQREASLALGLTETQSLMEIEVPQAVYA 200 Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 ++P +Q + +LK+++L + + DL+ Sbjct: 201 MLPAAVTQLVVVLKDTALGSIIMYTDLLQ 229 >gi|310779669|ref|YP_003968002.1| amino acid ABC transporter membrane protein, PAAT family [Ilyobacter polytropus DSM 2926] gi|309748992|gb|ADO83654.1| amino acid ABC transporter membrane protein, PAAT family [Ilyobacter polytropus DSM 2926] Length = 281 Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 48/182 (26%), Positives = 88/182 (48%), Gaps = 18/182 (9%) Query: 219 LPLLYISTF---LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGS--TVSPEFMSLYIAL 273 LP+ Y S F I G P +V I L F ++ G+ ++ ++ + + Sbjct: 112 LPVYYFSKFYVEFIRGTPLIVQIYL-------------FFYVVGTAFNITDRYIMGILIM 158 Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333 + ++ A++AEI+RSG+ ++ Q+E A AL T + ++LPQ ++ I PPL Q+ + Sbjct: 159 ASFSGAYVAEIIRSGIESISASQLETAKALAFTPFQTYVYIILPQVVKRITPPLAGQFAS 218 Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393 L+K+SSL + + + + T +E I YL L+ I+ + L K + Sbjct: 219 LIKDSSLLSIIAVNEFTKNVQEVDSLTFAPVENYFILAVGYLLLTYPISHYSKYLERKFS 278 Query: 394 LK 395 + Sbjct: 279 YE 280 >gi|256831908|ref|YP_003160635.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD [Jonesia denitrificans DSM 20603] gi|256685439|gb|ACV08332.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD [Jonesia denitrificans DSM 20603] Length = 218 Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 34/116 (29%), Positives = 67/116 (57%) Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 A ++AE+ R+G+ +VP+GQ EA AL ++ + V++PQA+R+ +P L + +++ K+ Sbjct: 100 ATYMAEVYRAGIDSVPQGQWEATTALSMSRARTWIAVIIPQAVRATVPALGNYVISMFKD 159 Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393 + +A+ ++V T IE I + I+L+ S +L ++RL ++A Sbjct: 160 TPFLIAITVTEIVRAAQTYGGNHFTYIEAITLTGVIFLASSYPTSLLISRLEKRLA 215 >gi|227546751|ref|ZP_03976800.1| ABC superfamily ATP binding cassette transporter, permease protein [Bifidobacterium longum subsp. infantis ATCC 55813] gi|322689655|ref|YP_004209389.1| glutamate ABC transporter permease [Bifidobacterium longum subsp. infantis 157F] gi|227212713|gb|EEI80594.1| ABC superfamily ATP binding cassette transporter, permease protein [Bifidobacterium longum subsp. infantis ATCC 55813] gi|320460991|dbj|BAJ71611.1| glutamate ABC transporter permease component [Bifidobacterium longum subsp. infantis 157F] Length = 366 Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 31/89 (34%), Positives = 59/89 (66%) Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322 SP + ++ +AL Y + +AE+VRSG+ +P GQ EA++ALGLT ++ + +PQA+ + Sbjct: 141 SPSYWAVVLALVLYNGSVVAELVRSGVGNLPGGQREASLALGLTETQSLMEIEVPQAVYA 200 Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 ++P +Q + +LK+++L + + DL+ Sbjct: 201 MLPAAVTQLVVVLKDTALGSIIMYTDLLQ 229 >gi|209518060|ref|ZP_03266890.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. H160] gi|209501466|gb|EEA01492.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. H160] Length = 240 Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 54/199 (27%), Positives = 95/199 (47%), Gaps = 12/199 (6%) Query: 204 ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL----GQFNFIGG 259 A +LSRH ++ + + Y + F G+P L++I Y +F L GQ+ G Sbjct: 45 AAKLSRH---RSLRVIGDFYTTVFR--GVPELLVI---YLFYFGGSTLLTTVGQWFGAEG 96 Query: 260 STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319 P F +A+ + A+ AE+ RS ++AV +G++EAA A G+ R +L+PQ Sbjct: 97 FVGVPPFAIGALAVGMISGAYQAEVYRSAVLAVSKGELEAARATGMHTLLVARRILIPQV 156 Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379 +R +P + + + LK+S+L G A+L+ T Q + + IYL ++ Sbjct: 157 LRFALPGIGNVWQLSLKDSALISVTGLAELLRTSQIAAGSTHQYLTFFAVGGAIYLVMTG 216 Query: 380 MIALFMNRLNAKIALKEKK 398 + N A++ K+ Sbjct: 217 ISNRVFNHAEARVGRSFKR 235 >gi|182435532|ref|YP_001823251.1| putative glutamate ABC transporter permease protein [Streptomyces griseus subsp. griseus NBRC 13350] gi|326776169|ref|ZP_08235434.1| polar amino acid ABC transporter, inner membrane subunit [Streptomyces cf. griseus XylebKG-1] gi|178464048|dbj|BAG18568.1| putative glutamate ABC transporter permease protein [Streptomyces griseus subsp. griseus NBRC 13350] gi|326656502|gb|EGE41348.1| polar amino acid ABC transporter, inner membrane subunit [Streptomyces cf. griseus XylebKG-1] Length = 313 Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 34/93 (36%), Positives = 57/93 (61%) Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327 +L LS Y AE++R+G+ +VP+GQ EAA ALG++ + VL+PQA+RS++P + Sbjct: 134 ALAAGLSVYNGCVQAEVLRAGINSVPKGQSEAAYALGMSKTQVMVSVLMPQAVRSMLPTI 193 Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 Q + LK++SL + + +L+ I + T Sbjct: 194 IGQLVVTLKDTSLGFIILYPELLQTARLIASNT 226 >gi|241113571|ref|YP_002973406.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240861779|gb|ACS59445.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 219 Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 35/95 (36%), Positives = 56/95 (58%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I + + A + AE+ R+G+ VPRGQ EAA A LT R+A V+LPQA+ +IP L + Sbjct: 93 IGMGIHYATYTAEVYRAGIENVPRGQWEAAKATNLTTRQAWIHVILPQAIPPMIPALANY 152 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365 ++ + K + L A+ +L++ +I N + IE Sbjct: 153 FIAMFKETPLLSAITVLELMNQAKSIANSNYRYIE 187 >gi|183601788|ref|ZP_02963158.1| permease protein of ABC transporter for glutamate [Bifidobacterium animalis subsp. lactis HN019] gi|219683682|ref|YP_002470065.1| permease protein of ABC transporter for glutamate [Bifidobacterium animalis subsp. lactis AD011] gi|241190714|ref|YP_002968108.1| glutamate ABC transporter permease [Bifidobacterium animalis subsp. lactis Bl-04] gi|241196120|ref|YP_002969675.1| glutamate ABC transporter permease [Bifidobacterium animalis subsp. lactis DSM 10140] gi|183219394|gb|EDT90035.1| permease protein of ABC transporter for glutamate [Bifidobacterium animalis subsp. lactis HN019] gi|219621332|gb|ACL29489.1| permease protein of ABC transporter for glutamate [Bifidobacterium animalis subsp. lactis AD011] gi|240249106|gb|ACS46046.1| permease protein of ABC transporter for glutamate [Bifidobacterium animalis subsp. lactis Bl-04] gi|240250674|gb|ACS47613.1| permease protein of ABC transporter for glutamate [Bifidobacterium animalis subsp. lactis DSM 10140] gi|289178452|gb|ADC85698.1| GluD [Bifidobacterium animalis subsp. lactis BB-12] gi|295793703|gb|ADG33238.1| permease protein of ABC transporter for glutamate [Bifidobacterium animalis subsp. lactis V9] Length = 363 Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 30/89 (33%), Positives = 59/89 (66%) Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322 SP + ++ I+L Y + +AE++RSG+ +P GQ EAA+ALG+T ++ + +PQA+ + Sbjct: 142 SPSYWAVVISLVFYNGSVVAELIRSGVGNLPGGQHEAAVALGMTRTQSLMSIEVPQAIYA 201 Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 ++P +Q + +LK+++L + + DL+ Sbjct: 202 MLPAAVTQLVVVLKDTALGSIIMYTDLLQ 230 Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust. Identities = 20/74 (27%), Positives = 39/74 (52%) Query: 78 PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137 P +++ L G T AF +I + + G + G GRL +++V IC + +E R Sbjct: 61 PALDGEAWSDFYLPGLWATLRAAFLAVIGSVVFGLVFGIGRLLPSRIVQGICAIVIEFCR 120 Query: 138 NIPPLVVIFFLYKS 151 +P L+++ F +++ Sbjct: 121 AVPVLIMMIFFWRA 134 >gi|154497089|ref|ZP_02035785.1| hypothetical protein BACCAP_01382 [Bacteroides capillosus ATCC 29799] gi|150273488|gb|EDN00616.1| hypothetical protein BACCAP_01382 [Bacteroides capillosus ATCC 29799] Length = 182 Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 47/193 (24%), Positives = 96/193 (49%), Gaps = 17/193 (8%) Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265 RLSRH + + YI +I G+P +V + + Y N + + + Sbjct: 7 RLSRH---RILRGPATAYID--IIRGIPVVVQLLIMY------------NVVLLNVTDNK 49 Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 + IA ++A++AEI RSG+ AV GQMEA +LGL+ + ++ PQA+++ +P Sbjct: 50 TLVAIIAFGLNSSAYMAEIYRSGINAVDPGQMEAGRSLGLSRAQTMWHIIFPQAIKNCLP 109 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 TS+++ L+K +++ + DL V ++ + T A + I Y +++ +++ Sbjct: 110 TYTSEFIVLVKETAVVGYIALVDLTKVYSSVQSLTYDAAAPLFIIAVAYFAITKTLSIIF 169 Query: 386 NRLNAKIALKEKK 398 + ++ +++ Sbjct: 170 GYMERRLRESDRR 182 >gi|89096759|ref|ZP_01169651.1| amino acid (glutamine) ABC transporter substrate binding protein/permease protein [Bacillus sp. NRRL B-14911] gi|89088774|gb|EAR67883.1| amino acid (glutamine) ABC transporter substrate binding protein/permease protein [Bacillus sp. NRRL B-14911] Length = 243 Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 32/122 (26%), Positives = 68/122 (55%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I +S T A++AEIVR G++++ +GQ EAA A+G+ H + V+LPQ +R+I+P + Sbjct: 106 IVVSINTGAYMAEIVRGGIVSIDKGQFEAAQAIGMNHYQTMWNVVLPQVIRNILPATGNH 165 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++ +K++S+ + ++L + ++ + E + IY ++ ++ + Sbjct: 166 FVINIKDTSVLNVISVSELYFMTKSVAGNNFRYFESFFVACVIYFVMTFIVTRILRYFER 225 Query: 391 KI 392 K+ Sbjct: 226 KL 227 >gi|116617492|ref|YP_817863.1| ABC-type amino acid transport system, permease component [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] gi|116096339|gb|ABJ61490.1| amino acid ABC transporter membrane protein 1, PAAT family [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] Length = 248 Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 44/140 (31%), Positives = 72/140 (51%), Gaps = 4/140 (2%) Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285 T I G P L+ + L Y + P+ + I VSP + L+I AAF++EI+ Sbjct: 61 TSFIRGTPILIQMFLVY---YGLPMFLGYVGINTDDVSP-LIYLFITYGLNMAAFLSEII 116 Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345 R+ L +VP Q EAA+ G T R+ ++ PQA+ +P + ++LL+++SLA +G Sbjct: 117 RAALESVPASQREAALTSGYTKRQMYFKIIFPQAVIIAVPSFATMVISLLQDTSLAFTIG 176 Query: 346 FADLVSVGGTIINQTGQAIE 365 D+V + T +E Sbjct: 177 VLDVVGKAKALGTATFHTVE 196 >gi|315144630|gb|EFT88646.1| ABC transporter, permease protein [Enterococcus faecalis TX2141] Length = 221 Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 39/127 (30%), Positives = 72/127 (56%), Gaps = 4/127 (3%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 ++ + +T A +AEI+R GL V +GQ+EAA + G ++ + ++LPQA+R+++P + SQ Sbjct: 92 VSFTVFTTAALAEIIRGGLNGVDKGQIEAARSQGFSNWQILYHIVLPQAIRNVLPAIVSQ 151 Query: 331 YLNLLKNSS-LAVAVGFADLVSVGGTIIN---QTGQAIEIILIWMFIYLSLSIMIALFMN 386 ++ ++K++S L + +L ++ QTGQ I I IY ++ I+ F Sbjct: 152 FVTVIKDTSFLYSVIALQELFGKSYILMGRYAQTGQVFTIYGIVALIYFIINFSISQFSR 211 Query: 387 RLNAKIA 393 L+ A Sbjct: 212 WLSRNWA 218 Score = 36.2 bits (82), Expect = 9.7, Method: Compositional matrix adjust. Identities = 21/58 (36%), Positives = 35/58 (60%), Gaps = 3/58 (5%) Query: 96 TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV---VIFFLYK 150 T +++F +I +TI GT++ R + + + +YVEV RNIP L+ VIF ++K Sbjct: 26 TLYISFVSIILSTIFGTILAVLRNQTHGPLKLLASIYVEVVRNIPNLLWIYVIFLIFK 83 >gi|189349963|ref|YP_001945591.1| polar amino acid transporter permease [Burkholderia multivorans ATCC 17616] gi|189333985|dbj|BAG43055.1| polar amino acid transport system permease protein [Burkholderia multivorans ATCC 17616] Length = 229 Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 62/234 (26%), Positives = 111/234 (47%), Gaps = 12/234 (5%) Query: 169 MFLNNRGLSFPTLTMDT--NAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226 MFL G P L T ++ V S + L L +++ H + +A+ Y T Sbjct: 1 MFLYGFG---PVLWAGTVQTIELSVLSLATAVALGLIGA-VAKLSHNRVLRAIATGY--T 54 Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQF-NFIGGSTVSPE-FMSLYIALSCYTAAFIAEI 284 LI +P LVL+ L + + + L QF + +G + + + F++ + L A+ E Sbjct: 55 TLIRSVPDLVLMLLLF--YSIQIWLNQFTDLVGWTQIDIDPFVAGVLTLGFIYGAYFTET 112 Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344 R +AVPRGQ+EA A G++ + +L PQ MR +P + + + L+K ++L + Sbjct: 113 FRGAFLAVPRGQLEAGAAYGMSGARVFVRILFPQMMRFALPGIGNNWQVLVKATALVSII 172 Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 G AD+V T IL+ IYL+++ + L + +L + ++ + Sbjct: 173 GLADVVKAAQDAGKSTFNMFFFILVAALIYLAITTVSNLVLIQLEKRYSMGVRH 226 >gi|170695849|ref|ZP_02886990.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia graminis C4D1M] gi|170139273|gb|EDT07460.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia graminis C4D1M] Length = 240 Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 47/172 (27%), Positives = 85/172 (49%), Gaps = 7/172 (4%) Query: 231 GLPTLVLIALKYQLHFDKPVL----GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286 G+P L++I Y +F L GQ+ G P F+ +A+ + A+ AE+ R Sbjct: 67 GVPELLVI---YLFYFGGSTLVTTVGQWFGAEGFVGVPPFVIGALAVGMISGAYQAEVYR 123 Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346 S ++AV RG++EAA ++G+ R +L+PQ +R +P + + + LK+S+L G Sbjct: 124 SAVLAVSRGELEAARSIGMPTLTMARRILIPQVLRFALPGIGNVWQLSLKDSALISVTGL 183 Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 A+L+ T Q ++ +YL ++ + NR A++ K+ Sbjct: 184 AELLRTSQVAAGSTHQYFTFFVVGGALYLLMTSISNRVFNRAEARVGRSFKR 235 >gi|317481689|ref|ZP_07940722.1| binding-protein-dependent transport system inner membrane component [Bifidobacterium sp. 12_1_47BFAA] gi|316916868|gb|EFV38257.1| binding-protein-dependent transport system inner membrane component [Bifidobacterium sp. 12_1_47BFAA] Length = 366 Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 31/89 (34%), Positives = 59/89 (66%) Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322 SP + ++ +AL Y + +AE+VRSG+ +P GQ EA++ALGLT ++ + +PQA+ + Sbjct: 141 SPSYWAVVLALVLYNGSVVAELVRSGVGNLPGGQREASLALGLTETQSLMEIEVPQAVYA 200 Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 ++P +Q + +LK+++L + + DL+ Sbjct: 201 MLPAAVTQLVVVLKDTALGSIIMYTDLLQ 229 >gi|323529255|ref|YP_004231407.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia sp. CCGE1001] gi|323386257|gb|ADX58347.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. CCGE1001] Length = 238 Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 41/122 (33%), Positives = 67/122 (54%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IAL A++AE+ R+G+ +VPRGQ+EAA LGL + V+LPQA R++ P + + Sbjct: 93 IALGVNVGAYLAEVFRAGIQSVPRGQVEAASILGLERSQIFMEVVLPQAARAVYPAIVNN 152 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 + LL +SL A+ +L I +T I+ I + YL LS +++ + A Sbjct: 153 LIQLLLGTSLLSAIALPELSGTATVINARTLLYIQTFTITLIAYLFLSNVLSWVAGLIGA 212 Query: 391 KI 392 ++ Sbjct: 213 RM 214 >gi|227529474|ref|ZP_03959523.1| L-cystine ABC superfamily ATP binding cassette transporter, membrane protein YckJ [Lactobacillus vaginalis ATCC 49540] gi|227350559|gb|EEJ40850.1| L-cystine ABC superfamily ATP binding cassette transporter, membrane protein YckJ [Lactobacillus vaginalis ATCC 49540] Length = 231 Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 47/199 (23%), Positives = 100/199 (50%), Gaps = 2/199 (1%) Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252 SF G++++L T L R H++ G + L + F ++ + L+ + + F P L Sbjct: 27 SFFFGLIIAL-VTALIRLSHQR-GPFMILKWFVQFYVWLFRSTPLLVQLFIVFFGLPYLR 84 Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312 + F + I S T ++ +E +R+ + +V GQ EA A+G+T + Sbjct: 85 IRGILPHGIKLEPFTAGIITFSLNTGSYASETIRAAISSVDHGQWEAGAAIGMTRLQILW 144 Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372 +++PQA+R +PPL++ +++L+K++SLA ++ ++ V I Q + + + Sbjct: 145 RIIIPQALRVALPPLSNSFISLVKDTSLAASITIMEMFEVSQQIAAANYQPLLMYTLVAL 204 Query: 373 IYLSLSIMIALFMNRLNAK 391 IY + ++++ + L + Sbjct: 205 IYAVFTTVLSVLQHYLEKR 223 >gi|88800986|ref|ZP_01116536.1| ABC-type arginine/histidine transport system, permease component [Reinekea sp. MED297] gi|88776253|gb|EAR07478.1| ABC-type arginine/histidine transport system, permease component [Reinekea sp. MED297] Length = 233 Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 38/127 (29%), Positives = 65/127 (51%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F IA TAA+ EI R + A PRG++EAA A G++ K + ++LP A R IP Sbjct: 100 FYPCLIAFVLNTAAYTTEIFRGAIEATPRGEIEAAKAYGMSWGKRMKRIILPSAFRRAIP 159 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 +++ + +L S++A V ADL++ G I + + + +YL L+ I Sbjct: 160 AYSNEVVFMLHASAIASTVTIADLLNAGRMIYARYYAPFDGFIFAALVYLCLTFGILAVF 219 Query: 386 NRLNAKI 392 ++ ++ Sbjct: 220 KQIEKRM 226 >gi|330965817|gb|EGH66077.1| amino acid ABC transporter permease [Pseudomonas syringae pv. actinidiae str. M302091] Length = 225 Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 39/103 (37%), Positives = 57/103 (55%), Gaps = 3/103 (2%) Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 +A+ AEI+RS LI V +GQ +A AL A R ++LPQA+ +IPP+ +Q + LLK Sbjct: 103 SAYGAEIIRSALINVSQGQRDALRALDFGPVSAFRRIILPQALPFMIPPMGNQLVELLKT 162 Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380 +SL + DL G +I GQ LIW + + +M Sbjct: 163 TSLVSLITLTDLTFTGSQLITTLGQQ---TLIWSIVLVCYFVM 202 >gi|209516019|ref|ZP_03264879.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. H160] gi|209503479|gb|EEA03475.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. H160] Length = 229 Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 57/189 (30%), Positives = 91/189 (48%), Gaps = 16/189 (8%) Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLF--ATRLSRHFHEKTGKALPLLYIST 226 MFL G + T T K+ VFS L VL L A +LS++ + + +Y T Sbjct: 1 MFLQGYGPLLLSGTWQT-VKLAVFSLALAFVLGLLGAAAKLSKN---RLSNGIGTVY--T 54 Query: 227 FLIFGLPTLVLIALKY---QLHFDKPVLGQFNFIGGSTVSPE-FMSLYIALSCYTAAFIA 282 L+ G+P LVL+ L + Q+ + + G + + F++ L A+ Sbjct: 55 TLVRGVPDLVLMLLLFYSIQIWLNNLT----DAFGWDQIDIDPFVAGVAVLGFIYGAYFT 110 Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342 E R IAVPRGQ+EA A G+T + V+ PQ MR +P + + + ++K ++L Sbjct: 111 ETFRGAFIAVPRGQLEAGAAYGMTGWQVFSRVMFPQMMRFALPGIGNNWQVMVKATALVS 170 Query: 343 AVGFADLVS 351 +G AD+V Sbjct: 171 IIGLADVVK 179 >gi|160901202|ref|YP_001566784.1| polar amino acid ABC transporter inner membrane protein [Delftia acidovorans SPH-1] gi|160366786|gb|ABX38399.1| polar amino acid ABC transporter, inner membrane subunit [Delftia acidovorans SPH-1] Length = 273 Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 34/118 (28%), Positives = 64/118 (54%) Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312 + +G + P+++ + + L+ T+A +AEI R + ++P Q EAA +L + R Sbjct: 128 ELKLVGWTFPFPDWVKVVLGLALPTSANVAEIFRGAIQSIPSAQWEAAQSLAFRRSEIFR 187 Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370 L++LPQ +R ++PP + Y ++ ++SLA VG D+V N + IL++ Sbjct: 188 LIVLPQCVRRMLPPWMNLYASITMSTSLASLVGVHDVVDTAQIASNTVARTDFTILVY 245 >gi|327193819|gb|EGE60696.1| polar amino acid ABC transporter inner membrane subunit [Rhizobium etli CNPAF512] Length = 104 Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 36/85 (42%), Positives = 53/85 (62%) Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356 MEAA ALG + A R V++PQ +R+ +PPL + ++L KNSSLAV +G ++L I Sbjct: 1 MEAARALGHGYVSAMRFVIMPQGVRNALPPLINHSVSLFKNSSLAVVIGASELTHAVKEI 60 Query: 357 INQTGQAIEIILIWMFIYLSLSIMI 381 N + + EI LI +YL S++I Sbjct: 61 ENLSFRTFEIYLIGTVLYLFFSLVI 85 >gi|317407717|gb|EFV87647.1| hypothetical protein HMPREF0005_03582 [Achromobacter xylosoxidans C54] Length = 223 Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 38/122 (31%), Positives = 72/122 (59%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +AL + A + AE+ R+G+ AVPRGQ+EAA AL ++ + V+LPQA+ ++P L + Sbjct: 95 VALGLHYATYCAEVYRAGIEAVPRGQLEAARALNMSPWRTAVGVVLPQAIPPVVPALGNY 154 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 + + K++ L A+ +L+ I + T + E + + ++L+LS++ A + L A Sbjct: 155 LVAMFKDTPLLSAITVVELLQQSKMIGSTTFRYTEPLTLVGVLFLALSLIAAWGVRGLEA 214 Query: 391 KI 392 ++ Sbjct: 215 RL 216 >gi|317047033|ref|YP_004114681.1| polar amino acid ABC transporter inner membrane subunit [Pantoea sp. At-9b] gi|316948650|gb|ADU68125.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea sp. At-9b] Length = 218 Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 37/108 (34%), Positives = 62/108 (57%), Gaps = 1/108 (0%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G V+P + + +AL+ YT+AF+ +I + A+P+GQ EA+ LGLT + V+ PQ Sbjct: 80 GIDVAP-WTAASLALTLYTSAFLVDIWYGSIRALPKGQWEASRCLGLTFGQTLYRVVAPQ 138 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 A+R I P + ++K ++LA +GF +L G + N T Q ++ Sbjct: 139 AIRIAIAPTVGFAVQVVKGTALASIIGFVELTKAGTILNNVTYQPFKV 186 >gi|229546204|ref|ZP_04434929.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus faecalis TX1322] gi|256852767|ref|ZP_05558137.1| amino acid ABC transporter [Enterococcus faecalis T8] gi|307291100|ref|ZP_07570985.1| ABC transporter, permease protein [Enterococcus faecalis TX0411] gi|229308728|gb|EEN74715.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus faecalis TX1322] gi|256711226|gb|EEU26264.1| amino acid ABC transporter [Enterococcus faecalis T8] gi|306497754|gb|EFM67286.1| ABC transporter, permease protein [Enterococcus faecalis TX0411] gi|315030717|gb|EFT42649.1| ABC transporter, permease protein [Enterococcus faecalis TX4000] Length = 221 Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 39/127 (30%), Positives = 72/127 (56%), Gaps = 4/127 (3%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 ++ + +T A +AEI+R GL V +GQ+EAA + G ++ + ++LPQA+R+++P + SQ Sbjct: 92 VSFTVFTTAALAEIIRGGLNGVDKGQIEAARSQGFSNWQILYHIVLPQAIRNVLPAIVSQ 151 Query: 331 YLNLLKNSS-LAVAVGFADLVSVGGTIIN---QTGQAIEIILIWMFIYLSLSIMIALFMN 386 ++ ++K++S L + +L ++ QTGQ I I IY ++ I+ F Sbjct: 152 FVTVIKDTSFLYSVIALQELFGKSYILMGRYAQTGQVFTIYGIVALIYFIINFSISQFSR 211 Query: 387 RLNAKIA 393 L+ A Sbjct: 212 WLSRNWA 218 Score = 38.1 bits (87), Expect = 2.4, Method: Compositional matrix adjust. Identities = 22/58 (37%), Positives = 35/58 (60%), Gaps = 3/58 (5%) Query: 96 TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV---VIFFLYK 150 T +++F +I +TI GT++ R N + + +YVEV RNIP L+ VIF ++K Sbjct: 26 TLYISFVSIILSTIFGTILAVLRNQTNGPLKLLASIYVEVVRNIPNLLWIYVIFLIFK 83 >gi|218678695|ref|ZP_03526592.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium etli CIAT 894] Length = 219 Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 51/169 (30%), Positives = 84/169 (49%), Gaps = 11/169 (6%) Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285 T +I G P LVL+ Y + V G + P F + +AL+ + ++ + EIV Sbjct: 60 TDIIRGTPVLVLVLASY--YVSAAV--------GLDLGP-FSAGVLALAVFCSSHVGEIV 108 Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345 R L A+P+GQ EAA A+GLT + VL PQ MR +P + ++K S+L +G Sbjct: 109 RGALQAIPKGQTEAAKAIGLTFTQTFTSVLWPQDMRQCLPAWVNTAAEMVKASTLLSVIG 168 Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394 A+L+ II++ +++ + +Y ++ I F + K AL Sbjct: 169 VAELLLRTQEIISRNFMSLQFYFLAGGLYFIVNYGIEHFGKYVERKTAL 217 >gi|306825706|ref|ZP_07459045.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sp. oral taxon 071 str. 73H25AP] gi|304432067|gb|EFM35044.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sp. oral taxon 071 str. 73H25AP] Length = 219 Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 29/73 (39%), Positives = 51/73 (69%) Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 A + +T+A +AEI+R GL AV +GQ EA ++ G T + ++LPQA+R ++P + SQ+ Sbjct: 90 AFTLFTSAALAEIIRGGLNAVDKGQYEAGMSQGFTSAQILYHIILPQAIRKMLPAIISQF 149 Query: 332 LNLLKNSSLAVAV 344 + ++K++SL +V Sbjct: 150 VTVIKDTSLLYSV 162 Score = 37.4 bits (85), Expect = 4.3, Method: Compositional matrix adjust. Identities = 19/61 (31%), Positives = 36/61 (59%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 I GF T +++ ++ +T+IGT++ R N ++ I +Y+E RN+P L+ IF + Sbjct: 16 IFKGFGLTLYISLIAIVLSTLIGTVLAVMRNGKNPVLRIISSIYIEFVRNVPNLLWIFTI 75 Query: 149 Y 149 + Sbjct: 76 F 76 >gi|253990334|ref|YP_003041690.1| arginine permease ArtQ [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253781784|emb|CAQ84947.1| arginine transport system permease protein artq [Photorhabdus asymbiotica] Length = 238 Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 38/129 (29%), Positives = 74/129 (57%), Gaps = 1/129 (0%) Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320 +V+P F+ IALS +A+ ++ +R + A+P GQ EA +ALGL + +++PQ Sbjct: 100 SVNP-FLCGVIALSLLYSAYASQTLRGAIKAIPAGQWEAGLALGLGRAEIFFRLIMPQMW 158 Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380 R +P L++Q+L LLK+++L + DL+ +I +T + +I IYL+++++ Sbjct: 159 RHALPGLSNQWLVLLKDTALVSLISVNDLMLQTKSIATRTQEPFTWYMIVALIYLAITLI 218 Query: 381 IALFMNRLN 389 + ++ Sbjct: 219 SQFILKKIE 227 >gi|219852262|ref|YP_002466694.1| polar amino acid ABC transporter, inner membrane subunit [Methanosphaerula palustris E1-9c] gi|219546521|gb|ACL16971.1| polar amino acid ABC transporter, inner membrane subunit [Methanosphaerula palustris E1-9c] Length = 225 Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 38/120 (31%), Positives = 70/120 (58%), Gaps = 1/120 (0%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G V P F+ + + L + A+ ++I R + ++ GQM AA +LG++ +A V+LPQ Sbjct: 83 GLDVDPFFVGI-VVLGLRSGAYQSQIFRGAIQSIGDGQMLAARSLGMSRVQAITSVILPQ 141 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378 A R +P +++Y LL +S++ A+G ++++ I+ QT Q + + LI IY+ L+ Sbjct: 142 AFRIALPGWSNEYPILLTDSAVCYAIGIMEILTRANNIVTQTYQPMPVFLICAGIYILLN 201 >gi|312132339|ref|YP_003999678.1| hism2 [Bifidobacterium longum subsp. longum BBMN68] gi|311773877|gb|ADQ03365.1| HisM2 [Bifidobacterium longum subsp. longum BBMN68] Length = 366 Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 31/89 (34%), Positives = 59/89 (66%) Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322 SP + ++ +AL Y + +AE+VRSG+ +P GQ EA++ALGLT ++ + +PQA+ + Sbjct: 141 SPSYWAVVLALVLYNGSVVAELVRSGVGNLPGGQREASLALGLTETQSLMEIEVPQAVYA 200 Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 ++P +Q + +LK+++L + + DL+ Sbjct: 201 MLPAAVTQLVVVLKDTALGSIIMYTDLLQ 229 >gi|307747399|gb|ADN90669.1| glutamine ABC transporter, permease protein [Campylobacter jejuni subsp. jejuni M1] Length = 233 Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 53/209 (25%), Positives = 105/209 (50%), Gaps = 18/209 (8%) Query: 191 VFSFVLG---IVLSLFATRLSRHFHE---KTGKALPLLYISTFLIFGLPTLVLIALKYQL 244 +FS ++G I++S F ++ + + + + PLL FL + LP K+ + Sbjct: 29 IFSLIIGLFCILMSYFKIKILENICKLYIEFSRNTPLLIQLFFLYYALP-------KFNI 81 Query: 245 HFDK-PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 H ++ P L T+ P F + LS +++AE +R+G A+ + Q EA ++L Sbjct: 82 HLEQIPPLDLICLSVEETLRPSFACAIVGLSFLGGSYMAESLRAGFEAIRKQQFEAGLSL 141 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363 G + V+LPQA+ +P +++ + L+K +S+ + DLV++ ++ + T + Sbjct: 142 GFSKFGNLCYVILPQALAISMPSISANIIFLIKETSVVSIIALPDLVNLMKSLNSLTYKT 201 Query: 364 IEIILI----WMFIYLSLSIMIALFMNRL 388 E++ + ++ I L LS ++ F RL Sbjct: 202 DELLFLLFMGYLCIILPLSFILLKFEKRL 230 Score = 37.7 bits (86), Expect = 3.4, Method: Compositional matrix adjust. Identities = 24/67 (35%), Positives = 36/67 (53%) Query: 86 ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145 A A L T L+F G+I + IIG K++ IC++Y+E RN P L+ + Sbjct: 10 APAFLTAAWLTIKLSFFGIIFSLIIGLFCILMSYFKIKILENICKLYIEFSRNTPLLIQL 69 Query: 146 FFLYKSV 152 FFLY ++ Sbjct: 70 FFLYYAL 76 >gi|239982050|ref|ZP_04704574.1| amino acid ABC transporter transmembrane protein [Streptomyces albus J1074] gi|291453902|ref|ZP_06593292.1| amino acid ABC transporter permease [Streptomyces albus J1074] gi|291356851|gb|EFE83753.1| amino acid ABC transporter permease [Streptomyces albus J1074] Length = 245 Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 41/130 (31%), Positives = 69/130 (53%), Gaps = 3/130 (2%) Query: 265 EFMSLY---IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321 +F+ +Y +AL A+ AE+VR L +V Q EA +AL T + RL+LLPQA+ Sbjct: 80 QFVPMYAAVLALGLSYGAYGAEVVRGALNSVTPAQREAGVALSFTPWQRMRLILLPQAVP 139 Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 +IPP + + LLK +++ +G D+ + T ++ +I I + IY ++ ++ Sbjct: 140 EMIPPFNNLLIELLKGTAIVSLLGVGDVSFAAYLVRLATQESAQIYTISLLIYFVIAFVL 199 Query: 382 ALFMNRLNAK 391 M L AK Sbjct: 200 TRGMRALEAK 209 >gi|241666824|ref|YP_002984908.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240862281|gb|ACS59946.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 234 Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 43/135 (31%), Positives = 76/135 (56%), Gaps = 4/135 (2%) Query: 251 LGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306 LGQF FI S + P + ++L+ TA + AEI R G+ AV ++EAA ++G++ Sbjct: 76 LGQFGFIRYSFLWPFLREPMVCAVLSLALCTAGYTAEIFRGGIRAVSPKEIEAARSIGMS 135 Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 R +L P A R +P +++ + ++K+++LA V ++ V +I+QT + +E+ Sbjct: 136 GFLLVRRILAPIAFRHALPAYSTEIVLMMKSTALASLVTVWEVTGVAQRLISQTYRTMEV 195 Query: 367 ILIWMFIYLSLSIMI 381 L IYL L+ +I Sbjct: 196 FLCAAIIYLVLNFII 210 >gi|186470875|ref|YP_001862193.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia phymatum STM815] gi|184197184|gb|ACC75147.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia phymatum STM815] Length = 221 Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 49/166 (29%), Positives = 83/166 (50%), Gaps = 11/166 (6%) Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286 +LI G+P L + + Y F P G +TV ++L+ Y +A+ AEI R Sbjct: 56 WLIRGMPYLSQLMIVY---FGLPAFGITMTAVQATV--------VSLAIYASAYFAEIFR 104 Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346 + +VPRGQ+EAA A G++ A R + LPQA+ +P L +Q + ++K S++A + Sbjct: 105 AAWASVPRGQIEAAQAFGVSRWAAFRAIELPQALAFAVPLLANQIILVIKESAVASVITV 164 Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 +L I+ T + + + Y L+ ++L + R A I Sbjct: 165 PELTMTASDIVASTYTYVGPYTLLIVSYWLLTQAVSLLVQRATAMI 210 >gi|108760413|ref|YP_633646.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease/periplasmic amino acid-binding protein [Myxococcus xanthus DK 1622] gi|108464293|gb|ABF89478.1| amino acid ABC transporter, permease protein/periplasmic amino acid-binding protein, His/Glu/Gln/Arg/opine family [Myxococcus xanthus DK 1622] Length = 481 Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 31/67 (46%), Positives = 48/67 (71%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + L AA+ +E+ R+G++AVPRGQ+EAA+ALG+ R A R V+LPQA R +P + + Sbjct: 357 LGLGLNYAAYESEVYRAGVLAVPRGQLEAAMALGMPLRLALRRVILPQAFRVALPGVAND 416 Query: 331 YLNLLKN 337 ++ LLK+ Sbjct: 417 FIALLKD 423 >gi|15893668|ref|NP_347017.1| amino acid ABC transporter permease [Clostridium acetobutylicum ATCC 824] gi|15023226|gb|AAK78357.1|AE007552_7 Amino acid (glutamine) ABC transporter, permease component [Clostridium acetobutylicum ATCC 824] Length = 216 Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 35/125 (28%), Positives = 69/125 (55%), Gaps = 1/125 (0%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII-PPLTS 329 + LS + A+IAEI+R G+IA+ +GQ EA+ ALG + + +I PP+ + Sbjct: 91 LGLSLNSGAYIAEIIRGGIIAIDKGQFEASKALGFPEGPTNEEGYICLKLLEVINPPMGN 150 Query: 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 +++ L+K++SL + +L+ +++ +G A+ +I YL L+ + +R+ Sbjct: 151 EFIALIKDTSLVSVITMEELLRKAQLLVSSSGDAVTPYVITGVFYLVLTTVFTFLFSRIE 210 Query: 390 AKIAL 394 K++L Sbjct: 211 KKLSL 215 >gi|312797032|ref|YP_004029954.1| Histidine transport system permease protein hisQ [Burkholderia rhizoxinica HKI 454] gi|312168807|emb|CBW75810.1| Histidine transport system permease protein hisQ [Burkholderia rhizoxinica HKI 454] Length = 229 Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 59/188 (31%), Positives = 92/188 (48%), Gaps = 14/188 (7%) Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLF--ATRLSRHFHEKTGKALPLLYIST 226 MFL G T T K+ + S + ++ L A RLSR + + + +Y T Sbjct: 1 MFLQGYGPVIAAGTWQT-IKLSLLSLAVAFMIGLLGAAARLSR---SRMPRMVGTVY--T 54 Query: 227 FLIFGLPTLVLIALKY---QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283 LI G+P LVL+ L + Q+ + L I + P F + + L A+ E Sbjct: 55 TLIRGVPDLVLMLLVFFSMQIWLNH--LTDLMQIEQIDIDP-FTAGVLTLGFIYGAYFTE 111 Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343 R ++VPRGQMEAA A G+T +A V+ PQ MR +P + + + L+K+++L Sbjct: 112 TFRGAFLSVPRGQMEAAAAYGMTSWQAFSRVMFPQMMRFALPGIGNNWQVLVKSTALVSI 171 Query: 344 VGFADLVS 351 +G AD+V Sbjct: 172 IGLADVVK 179 >gi|331656935|ref|ZP_08357897.1| arginine transport system permease protein ArtQ [Escherichia coli TA206] gi|331055183|gb|EGI27192.1| arginine transport system permease protein ArtQ [Escherichia coli TA206] Length = 238 Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 55/186 (29%), Positives = 95/186 (51%), Gaps = 8/186 (4%) Query: 217 KALPLLYISTFLIFGLPTLVLI---ALKYQLHFDK-PVLGQFNFIGGSTVSPEFMSLYIA 272 + LP + + F+ FG L+L L F + PV Q + I VSP F+ IA Sbjct: 55 RGLPEILVVLFIYFGSSQLLLTLSDGFTINLGFVQIPV--QMD-IENFDVSP-FLCGVIA 110 Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 LS AA+ ++ +R L AVP GQ E+ ALGL+ +++PQ R +P L +Q+L Sbjct: 111 LSLLYAAYASQTLRGALKAVPVGQWESGQALGLSKSAIFFRLVMPQMWRHALPGLGNQWL 170 Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 LLK+++L + DL+ +I +T + ++ IYL ++++ + R++ + Sbjct: 171 VLLKDTALVSLISVNDLMLQTKSIATRTQEPFTWYIVAAAIYLVITLLSQYILKRIDLRA 230 Query: 393 ALKEKK 398 E++ Sbjct: 231 TRFERR 236 >gi|124384742|ref|YP_001026324.1| glutamine ABC transporter [Burkholderia mallei NCTC 10229] gi|126451385|ref|YP_001080402.1| amino acid ABC transporter, permease protein [Burkholderia mallei NCTC 10247] gi|254358531|ref|ZP_04974804.1| ABC polar amino acid transporter, inner membrane subunit [Burkholderia mallei 2002721280] gi|124292762|gb|ABN02031.1| glutamine ABC transporter [Burkholderia mallei NCTC 10229] gi|126244255|gb|ABO07348.1| amino acid ABC transporter, permease protein [Burkholderia mallei NCTC 10247] gi|148027658|gb|EDK85679.1| ABC polar amino acid transporter, inner membrane subunit [Burkholderia mallei 2002721280] Length = 247 Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 36/96 (37%), Positives = 57/96 (59%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P ++ AL A++A V +G+ A GQ +A +ALGLT + R VLLPQA+R + Sbjct: 94 PGLAAVVCALLLVGGAYLAHSVHAGIRAAGDGQWQAGLALGLTRWQTVRHVLLPQAVRIM 153 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359 P +Q+++L+K++SLA VG +L V + N+ Sbjct: 154 TPSFVNQWVSLVKDTSLAYIVGVPELSFVATQVNNR 189 >gi|82777622|ref|YP_403971.1| arginine transporter permease subunit ArtQ [Shigella dysenteriae Sd197] gi|309785093|ref|ZP_07679726.1| arginine transport system permease protein artQ [Shigella dysenteriae 1617] gi|81241770|gb|ABB62480.1| arginine 3rd transport system permease protein [Shigella dysenteriae Sd197] gi|308927463|gb|EFP72937.1| arginine transport system permease protein artQ [Shigella dysenteriae 1617] Length = 238 Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 55/186 (29%), Positives = 95/186 (51%), Gaps = 8/186 (4%) Query: 217 KALPLLYISTFLIFGLPTLVLI---ALKYQLHFDK-PVLGQFNFIGGSTVSPEFMSLYIA 272 + LP + + F+ FG L+L L F + PV Q + I VSP F+ IA Sbjct: 55 RGLPEILVVLFIYFGSSQLLLTLSDGFTINLGFVQIPV--QMD-IENFDVSP-FLCGVIA 110 Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 LS AA+ ++ +R L AVP GQ E+ ALGL+ +++PQ R +P L +Q+L Sbjct: 111 LSLLYAAYASQTLRGALKAVPVGQWESGQALGLSKSAIFFRLVMPQMWRHALPGLGNQWL 170 Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 LLK+++L + DL+ +I +T + ++ IYL ++++ + R++ + Sbjct: 171 VLLKDTALVSLISVNDLMLQTKSIATRTQEPFTWYIVVAAIYLVITLLSQYILKRIDLRA 230 Query: 393 ALKEKK 398 E++ Sbjct: 231 TRFERR 236 >gi|315174636|gb|EFU18653.1| ABC transporter, permease protein [Enterococcus faecalis TX1346] Length = 221 Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 39/127 (30%), Positives = 72/127 (56%), Gaps = 4/127 (3%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 ++ + +T A +AEI+R GL V +GQ+EAA + G ++ + ++LPQA+R+++P + SQ Sbjct: 92 VSFTVFTTAALAEIIRGGLNGVDKGQIEAARSQGFSNWQILYHIVLPQAIRNVLPAIVSQ 151 Query: 331 YLNLLKNSS-LAVAVGFADLVSVGGTIIN---QTGQAIEIILIWMFIYLSLSIMIALFMN 386 ++ ++K++S L + +L ++ QTGQ I I IY ++ I+ F Sbjct: 152 FVTVIKDTSFLYSVIALQELFGKSYILMGRYAQTGQVFTIYGIVALIYFIINFSISQFSR 211 Query: 387 RLNAKIA 393 L+ A Sbjct: 212 WLSRNWA 218 >gi|257418946|ref|ZP_05595940.1| ABC amino acid transporter permease [Enterococcus faecalis T11] gi|257160774|gb|EEU90734.1| ABC amino acid transporter permease [Enterococcus faecalis T11] Length = 215 Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 39/127 (30%), Positives = 72/127 (56%), Gaps = 4/127 (3%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 ++ + +T A +AEI+R GL V +GQ+EAA + G ++ + ++LPQA+R+++P + SQ Sbjct: 86 VSFTVFTTAALAEIIRGGLNGVDKGQIEAARSQGFSNWQILYHIVLPQAIRNVLPAIVSQ 145 Query: 331 YLNLLKNSS-LAVAVGFADLVSVGGTIIN---QTGQAIEIILIWMFIYLSLSIMIALFMN 386 ++ ++K++S L + +L ++ QTGQ I I IY ++ I+ F Sbjct: 146 FVTVIKDTSFLYSVIALQELFGKSYILMGRYAQTGQVFTIYGIVALIYFIINFSISQFSR 205 Query: 387 RLNAKIA 393 L+ A Sbjct: 206 WLSRNWA 212 Score = 38.1 bits (87), Expect = 2.5, Method: Compositional matrix adjust. Identities = 22/58 (37%), Positives = 35/58 (60%), Gaps = 3/58 (5%) Query: 96 TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV---VIFFLYK 150 T +++F +I +TI GT++ R N + + +YVEV RNIP L+ VIF ++K Sbjct: 20 TLYISFVSIILSTIFGTILAVLRNQTNGPLKLLASIYVEVVRNIPNLLWIYVIFLIFK 77 >gi|213691608|ref|YP_002322194.1| polar amino acid ABC transporter, inner membrane subunit [Bifidobacterium longum subsp. infantis ATCC 15697] gi|213523069|gb|ACJ51816.1| polar amino acid ABC transporter, inner membrane subunit [Bifidobacterium longum subsp. infantis ATCC 15697] gi|320457695|dbj|BAJ68316.1| glutamate ABC transporter permease component [Bifidobacterium longum subsp. infantis ATCC 15697] Length = 366 Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 31/89 (34%), Positives = 59/89 (66%) Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322 SP + ++ +AL Y + +AE+VRSG+ +P GQ EA++ALGLT ++ + +PQA+ + Sbjct: 141 SPSYWAVVLALVLYNGSVVAELVRSGVGNLPGGQREASLALGLTETQSLMEIEVPQAVYA 200 Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 ++P +Q + +LK+++L + + DL+ Sbjct: 201 MLPAAVTQLVVVLKDTALGSIIMYTDLLQ 229 >gi|193069396|ref|ZP_03050351.1| arginine ABC transporter, permease protein ArtQ [Escherichia coli E110019] gi|192957349|gb|EDV87797.1| arginine ABC transporter, permease protein ArtQ [Escherichia coli E110019] Length = 238 Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 42/137 (30%), Positives = 75/137 (54%), Gaps = 1/137 (0%) Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321 VSP F+ IALS AA+ ++ +R L AVP GQ E+ ALGL+ +++PQ R Sbjct: 101 VSP-FLCGVIALSLLYAAYASQTLRGALKAVPVGQWESGQALGLSKSAIFFRLVMPQMWR 159 Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 +P L +Q+L LLK+++L + DL+ +I +T + ++ IYL ++++ Sbjct: 160 HALPGLGNQWLVLLKDTALVSLISVNDLMLQTKSIATRTQEPFTWYIVAAAIYLVITLLS 219 Query: 382 ALFMNRLNAKIALKEKK 398 + R++ + E++ Sbjct: 220 QYILKRIDLRATRFERR 236 >gi|302545137|ref|ZP_07297479.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces hygroscopicus ATCC 53653] gi|302462755|gb|EFL25848.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces himastatinicus ATCC 53653] Length = 216 Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 30/81 (37%), Positives = 51/81 (62%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IAL + + + AE+ R+G+ VP GQ EAA AL L+ + + V+LPQA+R ++P L + Sbjct: 93 IALGLHYSTYTAEVYRAGIDGVPVGQWEAATALSLSRGRTWQAVILPQAIRRVVPALGNY 152 Query: 331 YLNLLKNSSLAVAVGFADLVS 351 + +LK+S + +G D++ Sbjct: 153 VIAMLKDSPMLALIGVVDMLQ 173 >gi|239620728|ref|ZP_04663759.1| glutamate transport system permease protein gluD [Bifidobacterium longum subsp. infantis CCUG 52486] gi|239516304|gb|EEQ56171.1| glutamate transport system permease protein gluD [Bifidobacterium longum subsp. infantis CCUG 52486] Length = 366 Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 31/89 (34%), Positives = 59/89 (66%) Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322 SP + ++ +AL Y + +AE+VRSG+ +P GQ EA++ALGLT ++ + +PQA+ + Sbjct: 141 SPSYWAVVLALVLYNGSVVAELVRSGVGNLPGGQREASLALGLTETQSLMEIEVPQAVYA 200 Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 ++P +Q + +LK+++L + + DL+ Sbjct: 201 MLPAAVTQLVVVLKDTALGSIIMYTDLLQ 229 >gi|197295419|ref|YP_002153960.1| putative binding-protein-dependent transport system protein [Burkholderia cenocepacia J2315] gi|195944898|emb|CAR57507.1| putative binding-protein-dependent transport system component [Burkholderia cenocepacia J2315] Length = 228 Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 42/139 (30%), Positives = 69/139 (49%), Gaps = 24/139 (17%) Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286 F+ FGLP L +H D E+ + +A++ A+ EIVR Sbjct: 78 FIFFGLPAL-------GVHID-----------------EYTAAILAMTLNLGAYSVEIVR 113 Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346 +G+ AVP+G +EAA AL ++ + R V+LPQA+ + P L+SQ + + S++ + Sbjct: 114 AGVAAVPKGHLEAASALAMSRAQMLRHVVLPQALAKVFPALSSQIVITMLGSAVVSQISV 173 Query: 347 ADLVSVGGTIINQTGQAIE 365 ADL I ++ +A E Sbjct: 174 ADLTYAASYIQSRNFRAFE 192 >gi|322374751|ref|ZP_08049265.1| amino acid ABC transporter, permease protein [Streptococcus sp. C300] gi|321280251|gb|EFX57290.1| amino acid ABC transporter, permease protein [Streptococcus sp. C300] Length = 219 Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 29/73 (39%), Positives = 51/73 (69%) Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 A + +T+A +AEI+R GL AV +GQ EA ++ G T + ++LPQA+R ++P + SQ+ Sbjct: 90 AFTLFTSAALAEIIRGGLNAVDKGQYEAGMSQGFTSVQILYYIILPQAIRKMLPAIISQF 149 Query: 332 LNLLKNSSLAVAV 344 + ++K++SL +V Sbjct: 150 VTVIKDTSLLYSV 162 Score = 37.4 bits (85), Expect = 4.7, Method: Compositional matrix adjust. Identities = 19/61 (31%), Positives = 36/61 (59%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 I GF T +++ ++ +T+IGT++ R N ++ I +Y+E RN+P L+ IF + Sbjct: 16 IFKGFGLTLYISLIAIVLSTLIGTVLAVMRNGKNPVLRIISSIYIEFVRNVPNLLWIFTI 75 Query: 149 Y 149 + Sbjct: 76 F 76 >gi|221201395|ref|ZP_03574434.1| putative arginine/ornithine ABC transporter, permease protein [Burkholderia multivorans CGD2M] gi|221208876|ref|ZP_03581874.1| putative arginine/ornithine ABC transporter, permease protein [Burkholderia multivorans CGD2] gi|221171332|gb|EEE03781.1| putative arginine/ornithine ABC transporter, permease protein [Burkholderia multivorans CGD2] gi|221178663|gb|EEE11071.1| putative arginine/ornithine ABC transporter, permease protein [Burkholderia multivorans CGD2M] Length = 246 Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 55/206 (26%), Positives = 101/206 (49%), Gaps = 7/206 (3%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 V S + L L +++ H + +A+ Y T LI +P LVL+ L + + + Sbjct: 39 VLSLTTAVALGLIGA-VAKLSHNRVLRAIATGY--TTLIRSVPDLVLMLLLF--YSIQIW 93 Query: 251 LGQF-NFIGGSTVSPE-FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308 L QF + +G + + + F++ + L A+ E R +AVPRGQ+EA A G++ Sbjct: 94 LNQFTDLVGWTQIDIDPFVAGVLTLGFIYGAYFTETFRGAFLAVPRGQLEAGAAYGMSGA 153 Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368 + +L PQ MR +P + + + L+K ++L +G AD+V T IL Sbjct: 154 RVFVRILFPQMMRFALPGIGNNWQVLVKATALVSIIGLADVVKAAQDAGKSTFNMFFFIL 213 Query: 369 IWMFIYLSLSIMIALFMNRLNAKIAL 394 + IYL+++ + L + +L + ++ Sbjct: 214 VAALIYLAITTVSNLVLIQLEKRYSM 239 >gi|54288344|gb|AAV31632.1| predicted abc-type amino acid transport system permease component [uncultured alpha proteobacterium EBAC2C11] Length = 224 Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 39/125 (31%), Positives = 70/125 (56%), Gaps = 4/125 (3%) Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321 V P + +AL+ + + AEI+RSG + +GQ+EAA AL L++R +++PQ + Sbjct: 88 VWPFWCHALLALTINFSGYFAEILRSGFASTQKGQLEAAAALNLSNRTIFGSIIVPQTLI 147 Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 + P L+SQ++ L + + +G DL G I ++T ++ E+ + IY++ I Sbjct: 148 KMYPSLSSQFIFLFLTTGVISEIGVEDLTHAGLYIDSRTFRSFEVFITLTAIYVA----I 203 Query: 382 ALFMN 386 ALF+ Sbjct: 204 ALFLR 208 >gi|303328127|ref|ZP_07358566.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Desulfovibrio sp. 3_1_syn3] gi|302861953|gb|EFL84888.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Desulfovibrio sp. 3_1_syn3] Length = 230 Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 38/121 (31%), Positives = 67/121 (55%), Gaps = 11/121 (9%) Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290 G+P LVL+ L Y L FI + F+ + L C + A+ ++I R + Sbjct: 63 GVPILVLLFLCYGL-----------FISLGLPADPFLICCLVLGCTSTAYQSQIFRGAIE 111 Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 ++P+GQ++AA ALG+ R ++LPQA+R IP +++ LLK+S++ +G D++ Sbjct: 112 SLPQGQLKAARALGMNDFTGIRCIVLPQALRLSIPGWANEFSILLKDSAICYVLGTQDIM 171 Query: 351 S 351 + Sbjct: 172 A 172 >gi|83720821|ref|YP_441445.1| amino acid ABC transporter permease [Burkholderia thailandensis E264] gi|257139879|ref|ZP_05588141.1| amino acid ABC transporter, permease protein [Burkholderia thailandensis E264] gi|83654646|gb|ABC38709.1| amino acid ABC transporter, permease protein [Burkholderia thailandensis E264] Length = 229 Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 52/162 (32%), Positives = 85/162 (52%), Gaps = 13/162 (8%) Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALK-YQLHFDKPVL 251 SF+LG+V + A +LSR+ + + LY T LI G+P LVL+ L Y L L Sbjct: 28 SFLLGLVGA--AAKLSRN---RISNGIGTLY--TTLIRGVPDLVLMLLLFYSLQI---WL 77 Query: 252 GQF-NFIGGSTVSPE-FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309 QF + + + + F + + L A+ E R ++VPRGQ+EA A G+T + Sbjct: 78 NQFTDLMNWDQIDIDPFAAGVLVLGFIYGAYFTETFRGAFLSVPRGQLEAGSAYGMTDWQ 137 Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 ++ PQ MR +P + + + L+K+++L +G AD+V Sbjct: 138 VFARIMFPQMMRFALPGIGNNWQVLVKSTALVSIIGLADVVK 179 >gi|254251721|ref|ZP_04945039.1| Amino acid ABC transporter [Burkholderia dolosa AUO158] gi|124894330|gb|EAY68210.1| Amino acid ABC transporter [Burkholderia dolosa AUO158] Length = 229 Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 49/164 (29%), Positives = 86/164 (52%), Gaps = 17/164 (10%) Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLI-----ALKYQLHFD 247 SF+LG+V + A +LSR+ + + +Y T LI G+P LVL+ +++ L+ Sbjct: 28 SFLLGLVGA--AAKLSRN---RVTNGIGTVY--TTLIRGVPDLVLMLLLFYSIQIWLNVA 80 Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307 LG + P F++ + L A+ E R ++VPRGQ+EA A G+T+ Sbjct: 81 TDALGWDQI----DIDP-FLAGVLVLGFIYGAYFTETFRGAFLSVPRGQLEAGSAYGMTN 135 Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 + ++ PQ MR +P + + + L+K+++L +G AD+V Sbjct: 136 WQVFARIMFPQMMRFALPGIGNNWQVLVKSTALVSIIGLADVVK 179 >gi|307544385|ref|YP_003896864.1| ABC transporter permease [Halomonas elongata DSM 2581] gi|307216409|emb|CBV41679.1| ABC-type transport system permease protein [Halomonas elongata DSM 2581] Length = 224 Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 44/136 (32%), Positives = 78/136 (57%), Gaps = 12/136 (8%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQF-NFIGGSTVSPEFMSLYIALSC 275 A +L+IS F G P LV + L Y + P L F I G T + + L+ Sbjct: 53 NAATMLFISFFR--GTPLLVQLFLFY---YGLPQLLDFLTQINGITAT------IMGLTL 101 Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335 + +A++AE +R+ ++ V R Q EAA+++G+T+ + R ++LPQA R +P L + +++++ Sbjct: 102 HFSAYMAESIRAAIVGVDRSQTEAALSIGMTNGQLMRRIVLPQATRVAVPTLMNYFIDMI 161 Query: 336 KNSSLAVAVGFADLVS 351 K +SLA +G +L+ Sbjct: 162 KATSLAFTLGVTELMG 177 >gi|154508367|ref|ZP_02044009.1| hypothetical protein ACTODO_00864 [Actinomyces odontolyticus ATCC 17982] gi|153798001|gb|EDN80421.1| hypothetical protein ACTODO_00864 [Actinomyces odontolyticus ATCC 17982] Length = 219 Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 50/170 (29%), Positives = 88/170 (51%), Gaps = 8/170 (4%) Query: 230 FGLPTLVLIALKY-QLHFDKPVLGQFNFI------GGSTVSPEFMSLYIALSCYTAAFIA 282 + +P IA+ Y +L + P+L Q FI G S E ++ + L A++A Sbjct: 44 YRIPVATQIAVAYVELSRNTPLLVQLFFIYFGLPRVGIKWSGETCAI-VGLIFLGGAYMA 102 Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342 E +RSGL ++ Q E++ ALGLT + R V LPQA+ + +PPL + + L+K +S+ Sbjct: 103 EALRSGLDSIATIQWESSAALGLTRTQTLRHVALPQAIATSVPPLAANVIFLIKETSVVS 162 Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 V DLV V +I + E +++ + YL + + +++ + K+ Sbjct: 163 VVALPDLVYVAKDLIGMSYNTSEALILLVIAYLVILLPVSIAARLIEKKV 212 >gi|120612398|ref|YP_972076.1| polar amino acid ABC transporter inner membrane subunit [Acidovorax citrulli AAC00-1] gi|120590862|gb|ABM34302.1| amino acid ABC transporter membrane protein 1, PAAT family [Acidovorax citrulli AAC00-1] Length = 220 Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 51/170 (30%), Positives = 89/170 (52%), Gaps = 36/170 (21%) Query: 188 KIFVFSFVLGIVLSLFATRLSRHF-----------HEKTGKALPLLYISTFLIFGLPTLV 236 K+ SFV G++L + A + R F + +T + +P + + F++F LP L Sbjct: 24 KLTALSFVPGVLLGM-AVAMLRLFPLPPLRWVLTLYVETFRNIPSVALLIFIVFALPDL- 81 Query: 237 LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296 ++ + ++ V+ L + L C +AF A+ VRSG+ +P GQ Sbjct: 82 ----EFVIDYEPSVV-----------------LTLVLVC--SAFTADYVRSGINTIPGGQ 118 Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346 +EAA++LG+ + V+LPQA+RS++ P+TS + L+ ++SLA V F Sbjct: 119 IEAALSLGMRPARIIWSVVLPQALRSVVQPMTSLLIALMLSTSLASQVPF 168 >gi|322691616|ref|YP_004221186.1| glutamate ABC transporter permease [Bifidobacterium longum subsp. longum JCM 1217] gi|320456472|dbj|BAJ67094.1| glutamate ABC transporter permease component [Bifidobacterium longum subsp. longum JCM 1217] Length = 366 Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 31/89 (34%), Positives = 59/89 (66%) Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322 SP + ++ +AL Y + +AE+VRSG+ +P GQ EA++ALGLT ++ + +PQA+ + Sbjct: 141 SPSYWAVVLALVLYNGSVVAELVRSGVGNLPGGQREASLALGLTETQSLMEIEVPQAVYA 200 Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 ++P +Q + +LK+++L + + DL+ Sbjct: 201 MLPAAVTQLVVVLKDTALGSIIMYTDLLQ 229 >gi|296156266|ref|ZP_06839105.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. Ch1-1] gi|295893772|gb|EFG73551.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. Ch1-1] Length = 247 Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 32/85 (37%), Positives = 56/85 (65%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P ++ ALS A+++ V +G+ +V Q +AA++LGLT +A R V+LPQA+R + Sbjct: 94 PGLAAVVCALSLIGGAYLSHAVHAGIASVGAAQQQAALSLGLTRWQALRYVVLPQAVRIM 153 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFAD 348 +P +Q+++L+K++SLA VG + Sbjct: 154 MPSFVNQWVSLVKDTSLAYIVGVPE 178 >gi|294787059|ref|ZP_06752313.1| glutamate transport system permease protein GluD [Parascardovia denticolens F0305] gi|315226709|ref|ZP_07868497.1| glutamate ABC superfamily ATP binding cassette transporter, permease protein [Parascardovia denticolens DSM 10105] gi|294485892|gb|EFG33526.1| glutamate transport system permease protein GluD [Parascardovia denticolens F0305] gi|315120841|gb|EFT83973.1| glutamate ABC superfamily ATP binding cassette transporter, permease protein [Parascardovia denticolens DSM 10105] Length = 419 Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 36/133 (27%), Positives = 78/133 (58%) Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322 S + ++ ++L Y + +AE+VRSG+ ++P GQ EAA+ALGLT ++ LV +PQA+ + Sbjct: 146 SASYWAVTLSLVLYNGSVVAELVRSGVGSLPGGQHEAALALGLTRTRSLMLVEVPQAIYA 205 Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382 ++P +Q + +LK+++L + + DL+ + + ++ + + +Y + +++ Sbjct: 206 MLPAAVTQLVVVLKDTALGSIILYTDLLQQSRRLGSMYFNILQTLFMAGILYFIMCFIVS 265 Query: 383 LFMNRLNAKIALK 395 L A++A + Sbjct: 266 RIAETLPARMAAR 278 Score = 39.3 bits (90), Expect = 0.96, Method: Compositional matrix adjust. Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 1/85 (1%) Query: 78 PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137 P ++ L G V T A ++ + + G L G GRL N V W+ + VE R Sbjct: 65 PALDSEAWTDFYLPGLVQTLAAAGVAIVGSVLFGLLFGIGRLIPNGFVRWLSGIVVEFCR 124 Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHS 162 +P L+++ F+++ S L +P S Sbjct: 125 AVPVLLMMIFMWRWFAS-LDVPSAS 148 >gi|186471431|ref|YP_001862749.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia phymatum STM815] gi|184197740|gb|ACC75703.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia phymatum STM815] Length = 241 Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 40/122 (32%), Positives = 67/122 (54%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IAL A++AE+ R+G+ +VPRGQ+EAA LGL + V+LPQA R++ P + + Sbjct: 95 IALGVNVGAYMAEVFRAGIQSVPRGQIEAAGILGLGRSQVFIEVVLPQAARAVYPAIVNN 154 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 + LL +SL A+ +L I +T I+ + + YL LS ++ ++ A Sbjct: 155 LIQLLLGTSLLSAIALPELTGTATVINARTLLYIQTFSVTLIAYLILSNCLSWVAAQIGA 214 Query: 391 KI 392 ++ Sbjct: 215 RV 216 >gi|257082920|ref|ZP_05577281.1| ABC-type amino acid transport system [Enterococcus faecalis E1Sol] gi|256990950|gb|EEU78252.1| ABC-type amino acid transport system [Enterococcus faecalis E1Sol] Length = 215 Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 39/127 (30%), Positives = 72/127 (56%), Gaps = 4/127 (3%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 ++ + +T A +AEI+R GL V +GQ+EAA + G ++ + ++LPQA+R+++P + SQ Sbjct: 86 VSFTVFTTAALAEIIRGGLNGVDKGQIEAARSQGFSNWQILYHIVLPQAIRNVLPAIVSQ 145 Query: 331 YLNLLKNSS-LAVAVGFADLVSVGGTIIN---QTGQAIEIILIWMFIYLSLSIMIALFMN 386 ++ ++K++S L + +L ++ QTGQ I I IY ++ I+ F Sbjct: 146 FVTVIKDTSFLYSVIALQELFGKSYILMGRYAQTGQVFTIYGIVALIYFIINFSISQFSR 205 Query: 387 RLNAKIA 393 L+ A Sbjct: 206 WLSRNWA 212 Score = 38.1 bits (87), Expect = 2.7, Method: Compositional matrix adjust. Identities = 22/58 (37%), Positives = 35/58 (60%), Gaps = 3/58 (5%) Query: 96 TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV---VIFFLYK 150 T +++F +I +TI GT++ R N + + +YVEV RNIP L+ VIF ++K Sbjct: 20 TLYISFVSIILSTIFGTILAVLRNQTNGPLKLLASIYVEVVRNIPNLLWIYVIFLIFK 77 >gi|254519389|ref|ZP_05131445.1| amino acid ABC transporter [Clostridium sp. 7_2_43FAA] gi|226913138|gb|EEH98339.1| amino acid ABC transporter [Clostridium sp. 7_2_43FAA] Length = 482 Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 48/159 (30%), Positives = 86/159 (54%), Gaps = 17/159 (10%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP- 249 + + V+G++++L R + K K L +YIS + G P LV + L L+F P Sbjct: 293 IIALVIGVIIALI-----RINNIKILKQLVEVYIS--FLRGTPLLVQLFL---LYFGLPQ 342 Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309 ++ Q I T + I L+ +A+IAE +R A+ +GQMEAA+++G+T + Sbjct: 343 IIPQLKGITAYTAA------VIGLALNASAYIAESLRGAFDAIDKGQMEAALSVGMTKMQ 396 Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348 + +++PQ R +P L + +++ +K SSLA +G + Sbjct: 397 GMKRIVMPQMFRVAVPSLGNVFVDNIKGSSLAFTLGVTE 435 Score = 37.0 bits (84), Expect = 5.0, Method: Compositional matrix adjust. Identities = 21/70 (30%), Positives = 37/70 (52%) Query: 88 AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147 +I+ G T L+ MI A +IG ++ R++ K++ + VY+ R P LV +F Sbjct: 276 SIISGLKTTLSLSIISMIIALVIGVIIALIRINNIKILKQLVEVYISFLRGTPLLVQLFL 335 Query: 148 LYKSVLSVLP 157 LY + ++P Sbjct: 336 LYFGLPQIIP 345 >gi|254250730|ref|ZP_04944049.1| ABC polar amino acid transporter, inner membrane subunit [Burkholderia cenocepacia PC184] gi|124879864|gb|EAY67220.1| ABC polar amino acid transporter, inner membrane subunit [Burkholderia cenocepacia PC184] Length = 245 Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 42/139 (30%), Positives = 69/139 (49%), Gaps = 24/139 (17%) Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286 F+ FGLP L +H D E+ + +A++ A+ EIVR Sbjct: 95 FIFFGLPAL-------GVHID-----------------EYTAAILAMTLNLGAYSVEIVR 130 Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346 +G+ AVP+G +EAA AL ++ + R V+LPQA+ + P L+SQ + + S++ + Sbjct: 131 AGVAAVPKGHLEAASALAMSRAQMLRHVVLPQALAKVFPALSSQIVITMLGSAVVSQISV 190 Query: 347 ADLVSVGGTIINQTGQAIE 365 ADL I ++ +A E Sbjct: 191 ADLTYAASYIQSRNFRAFE 209 >gi|153800770|ref|ZP_01955356.1| membrane protein [Vibrio cholerae MZO-3] gi|124123745|gb|EAY42488.1| membrane protein [Vibrio cholerae MZO-3] Length = 229 Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 49/129 (37%), Positives = 73/129 (56%), Gaps = 16/129 (12%) Query: 228 LIFGLPTLVLIALKY----QLHFDKPVLGQFNFIGGS--TVSPEFMSLYIALSCYTAAFI 281 +I GLP L+++ Y Q+ F FI G +SP F+S IALS A++ Sbjct: 56 VIRGLPELLVVLFIYFGSTQVLF---------FITGEFIEISP-FISGVIALSLIFASYA 105 Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341 ++ +R L AV RGQ E A ALG+ A ++LPQA+R +P L +Q+L LLK+++L Sbjct: 106 SQTLRGALKAVGRGQRETASALGIPPSHAFIRIVLPQAVRHALPGLMNQWLVLLKDTALV 165 Query: 342 VAVGFADLV 350 +G DL+ Sbjct: 166 SLIGVTDLL 174 >gi|325567192|ref|ZP_08143859.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus casseliflavus ATCC 12755] gi|325158625|gb|EGC70771.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Enterococcus casseliflavus ATCC 12755] Length = 214 Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 44/176 (25%), Positives = 90/176 (51%), Gaps = 25/176 (14%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 + PLL F+ +GLP L ++ FD+ F + IA Sbjct: 60 RGTPLLLQLIFVFYGLPILGIV-------FDR-----------------FEAALIAFIIN 95 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 AA+ AEI R G+ ++P GQ EAA L L+ + + +++PQ ++ +P + ++ +NL+K Sbjct: 96 YAAYFAEIFRGGIQSIPAGQYEAAKVLRLSPIQTIQKIIIPQVVKITLPSVGNEVINLVK 155 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 ++SL +G +D++ +G + + + ++ + + IYL ++ + L + ++ K+ Sbjct: 156 DTSLVYILGLSDVMRIGKIAMERDSTLLPLVGVGL-IYLVMTGVFTLLLKQIETKL 210 >gi|241762911|ref|ZP_04760974.1| polar amino acid ABC transporter, inner membrane subunit [Acidovorax delafieldii 2AN] gi|241368086|gb|EER62291.1| polar amino acid ABC transporter, inner membrane subunit [Acidovorax delafieldii 2AN] Length = 273 Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 34/106 (32%), Positives = 59/106 (55%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P+++ + + L+ T+A +AEI R + ++P Q EAA +L + RLV+LPQ +R + Sbjct: 139 PDWVKVVLGLALPTSANVAEIFRGAIQSIPSAQWEAAQSLAFRRSQIFRLVVLPQCVRRM 198 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369 +PP + Y ++ ++SLA VG D+V N + IL+ Sbjct: 199 LPPWMNLYASITMSTSLASLVGVHDVVDTAQIASNTVARTDFTILV 244 Score = 36.6 bits (83), Expect = 7.1, Method: Compositional matrix adjust. Identities = 30/76 (39%), Positives = 39/76 (51%), Gaps = 7/76 (9%) Query: 108 TIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDH--SIVL 165 T +G +VGA LS V + R YV+VFRN P LV+I+F V P H S Sbjct: 81 TAVGLVVGALSLSPVHAVRVVVRSYVQVFRNAPILVLIYF----TTYVFPFEVHLVSWTF 136 Query: 166 PFGMFLN-NRGLSFPT 180 PF ++ GL+ PT Sbjct: 137 PFPDWVKVVLGLALPT 152 >gi|218516893|ref|ZP_03513733.1| probable amino acid ABC transporter, permease protein [Rhizobium etli 8C-3] Length = 102 Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 40/102 (39%), Positives = 59/102 (57%), Gaps = 4/102 (3%) Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356 M+A +ALGL R V+LPQA+ IP L S ++L K S+L AVG ADL+ VG I Sbjct: 1 MDACVALGLPQRVQVVNVVLPQAVLRAIPTLLSNCVSLFKESALVSAVGMADLMFVGQNI 60 Query: 357 INQTGQAIEII----LIWMFIYLSLSIMIALFMNRLNAKIAL 394 N T + +E++ LI+ I L+ ++L R+ K+A+ Sbjct: 61 SNNTARPVEVLTVVALIYFVIAFPLTRAVSLMEGRILKKLAI 102 >gi|323967297|gb|EGB62720.1| inner membrane transport system [Escherichia coli M863] gi|327253649|gb|EGE65278.1| arginine transport system permease protein artQ [Escherichia coli STEC_7v] Length = 238 Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 42/137 (30%), Positives = 75/137 (54%), Gaps = 1/137 (0%) Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321 VSP F+ IALS AA+ ++ +R L AVP GQ E+ ALGL+ +++PQ R Sbjct: 101 VSP-FLCGVIALSLLYAAYASQTLRGALKAVPVGQWESGQALGLSKSAIFFRLVMPQMWR 159 Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 +P L +Q+L LLK+++L + DL+ +I +T + ++ IYL ++++ Sbjct: 160 HALPGLGNQWLVLLKDTALVSLISVNDLMLQTKSIATRTQEPFTWYIVAAAIYLVITLLS 219 Query: 382 ALFMNRLNAKIALKEKK 398 + R++ + E++ Sbjct: 220 QYILKRIDLRATRFERR 236 >gi|306825322|ref|ZP_07458664.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sp. oral taxon 071 str. 73H25AP] gi|304432758|gb|EFM35732.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sp. oral taxon 071 str. 73H25AP] Length = 213 Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 60/217 (27%), Positives = 107/217 (49%), Gaps = 29/217 (13%) Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF---GLPTLV 236 ++T+ A + +FS LGIV++ FA ++ PL Y+ I+ G P L+ Sbjct: 16 SMTLQVFALVLIFSIPLGIVVA-FALQVRWK---------PLHYLIDLYIWVMRGTPLLL 65 Query: 237 -LIALKYQLHFDKPVLG-QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294 LI + Y L P +G + + + + IA AA+ AEI R G+ +P+ Sbjct: 66 QLIFIYYVL----PSIGIRLDRLPAAV---------IAFVLNYAAYFAEIFRGGIETIPK 112 Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354 GQ EAA L + R ++LPQ + ++P + ++ ++L+K++SL A+G +DL+ Sbjct: 113 GQYEAAKVLKFSSFDTVRYIILPQVTKIVLPSVFNEIMSLVKDTSLVYALGISDLILASR 172 Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 T N+ + + L IYL + ++ + +L K Sbjct: 173 TAANRDASLVPMFLAGA-IYLIMIGLVTIIAKKLEKK 208 >gi|238027409|ref|YP_002911640.1| ABC amino acid transporter, inner membrane subunit [Burkholderia glumae BGR1] gi|237876603|gb|ACR28936.1| ABC amino acid transporter, inner membrane subunit [Burkholderia glumae BGR1] Length = 241 Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 50/151 (33%), Positives = 80/151 (52%), Gaps = 12/151 (7%) Query: 204 ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL----GQFNFIGG 259 A +LSR +T + L Y + F G+P L++I Y +F L GQ+ G Sbjct: 46 ALKLSRR---RTLRVLGDAYTTVFR--GVPELLVI---YLFYFGGSSLVTTVGQWFGADG 97 Query: 260 STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319 P F +A+ + A+ AE+ R+ ++AV RG++EAA A+G+ A R VL+PQ Sbjct: 98 FVGVPPFAIGAVAVGMISGAYQAEVYRAAVLAVSRGELEAARAIGMPRLTAVRRVLIPQV 157 Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 +R +P L + + LK+S+L G A+L+ Sbjct: 158 LRFALPGLGNVWQLSLKDSALISVTGLAELL 188 Score = 37.7 bits (86), Expect = 3.3, Method: Compositional matrix adjust. Identities = 20/69 (28%), Positives = 35/69 (50%) Query: 81 SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140 + + +L+G + T L S + ++ G LV A +LS + + + Y VFR +P Sbjct: 11 GSQGWGSVLLLGALMTIVLTLSALAIGSVFGGLVAALKLSRRRTLRVLGDAYTTVFRGVP 70 Query: 141 PLVVIFFLY 149 L+VI+ Y Sbjct: 71 ELLVIYLFY 79 >gi|161525299|ref|YP_001580311.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia multivorans ATCC 17616] gi|221214043|ref|ZP_03587016.1| putative arginine/ornithine ABC transporter, permease protein [Burkholderia multivorans CGD1] gi|160342728|gb|ABX15814.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia multivorans ATCC 17616] gi|221166220|gb|EED98693.1| putative arginine/ornithine ABC transporter, permease protein [Burkholderia multivorans CGD1] Length = 260 Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 55/209 (26%), Positives = 103/209 (49%), Gaps = 7/209 (3%) Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247 ++ V S + L L +++ H + +A+ Y T LI +P LVL+ L + + Sbjct: 50 ELSVLSLATAVALGLIGA-VAKLSHNRVLRAIATGY--TTLIRSVPDLVLMLLLF--YSI 104 Query: 248 KPVLGQF-NFIGGSTVSPE-FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305 + L QF + +G + + + F++ + L A+ E R +AVPRGQ+EA A G+ Sbjct: 105 QIWLNQFTDLVGWTQIDIDPFVAGVLTLGFIYGAYFTETFRGAFLAVPRGQLEAGAAYGM 164 Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365 + + +L PQ MR +P + + + L+K ++L +G AD+V T Sbjct: 165 SGARVFVRILFPQMMRFALPGIGNNWQVLVKATALVSIIGLADVVKAAQDAGKSTFNMFF 224 Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIAL 394 IL+ IYL+++ + L + +L + ++ Sbjct: 225 FILVAALIYLAITTVSNLVLIQLEKRYSM 253 >gi|330807009|ref|YP_004351471.1| Putative ABC transporter, permease component [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327375117|gb|AEA66467.1| Putative ABC transporter, permease component [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 231 Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 48/193 (24%), Positives = 91/193 (47%), Gaps = 23/193 (11%) Query: 214 KTGKALPLLYIS---TFLIFGLPTLVLIALKY----------QLHFDKPVLGQFNFIGGS 260 KT PL ++ + L+ G+P L+ + L Y +F KP L F G Sbjct: 41 KTSPYKPLQWLGGTYSTLVRGIPELLWVLLIYFGTVNLMRALGEYFGKPDLALDAFAAG- 99 Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320 IAL A+ E+ R ++A+P+G EA +ALGL+ + +++PQ Sbjct: 100 ---------VIALGLCFGAYATEVFRGAILAIPKGHREAGVALGLSKWRIFTRLIMPQMW 150 Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380 R +P L + ++ L+K+++L +G +++ + + Q ++ F+YL L+++ Sbjct: 151 RIALPGLGNLFMILMKDTALVSVIGLEEIMRHAQIGVTVSKQPFTFYMVAAFMYLGLTVL 210 Query: 381 IALFMNRLNAKIA 393 + M+ L + A Sbjct: 211 AMIGMHLLERRAA 223 >gi|323163915|gb|EFZ49724.1| glutamate/aspartate ABC transporter, permease protein GltJ [Shigella sonnei 53G] Length = 99 Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 33/92 (35%), Positives = 55/92 (59%) Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362 +GLT +A R VLLP A R I+PP+TS+ +NL+KNS++A +G D+ + G +++ + Sbjct: 1 MGLTLPQAYRYVLLPNAYRVIVPPMTSEMMNLVKNSAIASTIGLVDMAAQAGKLLDYSAH 60 Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394 A E Y+ ++ +I L M + K+ L Sbjct: 61 AWESFTAITLAYVLINAVIMLVMTLVERKVRL 92 >gi|218548381|ref|YP_002382172.1| arginine transporter permease subunit ArtQ [Escherichia fergusonii ATCC 35469] gi|218355922|emb|CAQ88537.1| arginine transporter subunit ;membrane component of ABC superfamily [Escherichia fergusonii ATCC 35469] gi|323976753|gb|EGB71841.1| inner membrane transport system [Escherichia coli TW10509] gi|324112656|gb|EGC06632.1| inner membrane transport system [Escherichia fergusonii B253] gi|325496804|gb|EGC94663.1| arginine transporter permease subunit ArtQ [Escherichia fergusonii ECD227] Length = 238 Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 42/137 (30%), Positives = 75/137 (54%), Gaps = 1/137 (0%) Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321 VSP F+ IALS AA+ ++ +R L AVP GQ E+ ALGL+ +++PQ R Sbjct: 101 VSP-FLCGVIALSLLYAAYASQTLRGALKAVPVGQWESGQALGLSKSAIFFRLVMPQMWR 159 Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 +P L +Q+L LLK+++L + DL+ +I +T + ++ IYL ++++ Sbjct: 160 HALPGLGNQWLVLLKDTALVSLISVNDLMLQTKSIATRTQEPFTWYIVAAAIYLVITLLS 219 Query: 382 ALFMNRLNAKIALKEKK 398 + R++ + E++ Sbjct: 220 QYILKRIDLRATRFERR 236 >gi|330501278|ref|YP_004378147.1| polar amino acid ABC transporter inner membrane subunit [Pseudomonas mendocina NK-01] gi|328915564|gb|AEB56395.1| polar amino acid ABC transporter, inner membrane subunit [Pseudomonas mendocina NK-01] Length = 215 Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 34/102 (33%), Positives = 61/102 (59%), Gaps = 1/102 (0%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G VSP +++ AL+ +T+AF+AEI R + ++ RGQ EA+ +L ++ + R V+LPQ Sbjct: 79 GIDVSP-WLAAATALTLFTSAFLAEIWRGCVESISRGQWEASESLAMSRLETLRHVVLPQ 137 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 A+R + P + ++K +++ +GF +L G + N T Sbjct: 138 ALRIAVAPTVGFSVQVVKGTAVTSIIGFTELTKTGSMLANAT 179 >gi|303233085|ref|ZP_07319760.1| ABC transporter, permease protein [Atopobium vaginae PB189-T1-4] gi|302480860|gb|EFL43945.1| ABC transporter, permease protein [Atopobium vaginae PB189-T1-4] Length = 564 Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 56/208 (26%), Positives = 104/208 (50%), Gaps = 24/208 (11%) Query: 194 FVLGIVLSLFAT-RLSRHFHE-----KTGKALPLLYISTFLIFGLPTLV---LIALKYQL 244 F++G+++++F + ++RH KT + +YI F G P +V LI +L Sbjct: 360 FLIGLLIAIFQSLHVARHHRSTYALYKTLDIIIKVYIEIFR--GTPMMVQAMLIFYGSKL 417 Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304 F G +SP S ++ +S + A+++E VR G++ V GQ+E A ALG Sbjct: 418 FF------------GIDLSP-LTSAFLIVSINSGAYLSETVRGGILGVSAGQLEGAKALG 464 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364 L H ++LPQA+ SI+P + ++ +K++S+ + ++L V +I T Q Sbjct: 465 LGHWDTMVHIILPQAIVSILPSVGNELNMNIKDTSVLNVIAVSELFFVTKSIAGTTYQTF 524 Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKI 392 + LI IY L+ ++ + ++ + Sbjct: 525 QTYLITSVIYFILTFAASIMLTQIERHV 552 >gi|293391094|ref|ZP_06635428.1| glutamine-binding periplasmic protein/glutamine transport system permease protein [Aggregatibacter actinomycetemcomitans D7S-1] gi|290951628|gb|EFE01747.1| glutamine-binding periplasmic protein/glutamine transport system permease protein [Aggregatibacter actinomycetemcomitans D7S-1] Length = 227 Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 35/131 (26%), Positives = 76/131 (58%), Gaps = 6/131 (4%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + IA S A+ +E +R+ ++++P+GQ EA+ ++G+ + + ++PQA+R +P Sbjct: 95 FPTAIIAFSINIGAYASETIRAAILSIPKGQWEASYSIGMNYFQTFIRTIMPQALRVSVP 154 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW---MFIYLSLSIMIA 382 PL++ +++ +K++SLA V ++ V I T + E I+I+ IY + ++++ Sbjct: 155 PLSNTFISNVKDTSLASLVLVTEMFRVAQNI---TAENYEFIMIYSEAALIYWCICLVLS 211 Query: 383 LFMNRLNAKIA 393 RL +++ Sbjct: 212 FAQERLEKRLS 222 >gi|323339555|ref|ZP_08079830.1| ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus ruminis ATCC 25644] gi|323093035|gb|EFZ35632.1| ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus ruminis ATCC 25644] Length = 227 Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 49/156 (31%), Positives = 80/156 (51%), Gaps = 22/156 (14%) Query: 222 LYISTFLIFGLPTLVLIALKY-----QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 LY+ F I +PT+VL+ L Y Q H + VS E+M++ +A S + Sbjct: 60 LYLEFFRI--VPTIVLLFLVYYILPRQFHVE--------------VSAEWMAV-LAFSLW 102 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 +A ++IVR L +VP+ Q EA +ALGLT + VL+PQA +P + ++K Sbjct: 103 VSAEFSDIVRGALESVPKHQREAGLALGLTKGQLFVHVLMPQAFMLELPAAINLATRVVK 162 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372 +SL + + D+++VG II Q + W++ Sbjct: 163 TTSLLMIISVMDVINVGQQIIEANNQQYPSGVFWIY 198 >gi|237736050|ref|ZP_04566531.1| polar amino acid ABC transporter, inner membrane subunit [Fusobacterium mortiferum ATCC 9817] gi|229421864|gb|EEO36911.1| polar amino acid ABC transporter, inner membrane subunit [Fusobacterium mortiferum ATCC 9817] Length = 255 Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 34/120 (28%), Positives = 67/120 (55%) Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 +S T A+++EIVR G+I+V +GQ EAA A+G+ H + V+LPQ +R+I+P ++++ Sbjct: 108 VSINTGAYMSEIVRGGIISVDKGQFEAAQAIGMNHFQTMTNVVLPQVVRNILPATGNEFV 167 Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 +K++S+ + ++L T+ + E I +Y ++ I + + K+ Sbjct: 168 INIKDTSVLNVISVSELFFQTKTVAGNNFRYFETFFITCILYFVMTFTITRILRYIEVKL 227 >gi|307331405|ref|ZP_07610524.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD [Streptomyces violaceusniger Tu 4113] gi|306882964|gb|EFN14031.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD [Streptomyces violaceusniger Tu 4113] Length = 216 Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 30/81 (37%), Positives = 50/81 (61%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IAL + + + AE+ R+G+ VP GQ EAA AL L+ + V+LPQA+R ++P L + Sbjct: 93 IALGLHYSTYTAEVYRAGIDGVPNGQWEAATALSLSRGRTWTAVILPQAIRRVVPALGNY 152 Query: 331 YLNLLKNSSLAVAVGFADLVS 351 + +LK+S + +G D++ Sbjct: 153 VIAMLKDSPMLALIGVVDMLQ 173 >gi|289168424|ref|YP_003446693.1| ABC-type amino acid transporter, membrane-spanning permease [Streptococcus mitis B6] gi|307704347|ref|ZP_07641264.1| binding-protein-dependent transport system inner membrane component family protein [Streptococcus mitis SK597] gi|288907991|emb|CBJ22831.1| ABC-type amino acid transporter, membrane-spanning permease [Streptococcus mitis B6] gi|307622107|gb|EFO01127.1| binding-protein-dependent transport system inner membrane component family protein [Streptococcus mitis SK597] Length = 219 Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 29/73 (39%), Positives = 51/73 (69%) Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 A + +T+A +AEI+R GL AV +GQ EA ++ G T + ++LPQA+R ++P + SQ+ Sbjct: 90 AFTLFTSAALAEIIRGGLNAVDKGQYEAGMSQGFTSAQILYHIILPQAIRKMLPAIISQF 149 Query: 332 LNLLKNSSLAVAV 344 + ++K++SL +V Sbjct: 150 VTVIKDTSLLYSV 162 Score = 37.4 bits (85), Expect = 4.1, Method: Compositional matrix adjust. Identities = 19/61 (31%), Positives = 36/61 (59%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 I GF T +++ ++ +T+IGT++ R N ++ I +Y+E RN+P L+ IF + Sbjct: 16 IFKGFGLTLYISLIAIVLSTLIGTVLAVMRNGKNPVLRIISSIYIEFVRNVPNLLWIFTI 75 Query: 149 Y 149 + Sbjct: 76 F 76 >gi|317048144|ref|YP_004115792.1| polar amino acid ABC transporter inner membrane subunit [Pantoea sp. At-9b] gi|316949761|gb|ADU69236.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea sp. At-9b] Length = 502 Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 54/181 (29%), Positives = 94/181 (51%), Gaps = 10/181 (5%) Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247 ++ V +++ GIVL L L++ + YI +L LP LVL+ + L Sbjct: 26 QLSVLTWLGGIVLGL-GVALAKQSRNAVLRNAATCYI--WLFRSLPLLVLLIFIFNL--- 79 Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307 P + F G +P F + +AL A+IAEI R GL++V RGQ EA ALGL Sbjct: 80 -PQI--FPATSGMLSNP-FAAGLLALIISETAYIAEIHRGGLLSVQRGQFEAGRALGLNT 135 Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367 + +++PQA+R +P L ++++ ++K +SL + ++++ VG + + +E + Sbjct: 136 AQIRLSIIIPQALRISLPTLVNEFITIVKMTSLVSVISLSEILMVGERLYTDNFKVMETL 195 Query: 368 L 368 L Sbjct: 196 L 196 >gi|162148487|ref|YP_001602948.1| hypothetical protein GDI_2708 [Gluconacetobacter diazotrophicus PAl 5] gi|161787064|emb|CAP56651.1| putative membrane protein [Gluconacetobacter diazotrophicus PAl 5] Length = 144 Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 43/139 (30%), Positives = 73/139 (52%), Gaps = 1/139 (0%) Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316 + G VS ++++ A+ +IAEIV GL +VP Q+EAA+ L L R V++ Sbjct: 7 VAGLDVSERTVAIW-AIGMIATGYIAEIVHGGLRSVPTDQVEAAVTLNLPLLARWRHVIV 65 Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376 PQA+ I+PP + +K+++LA VG +L G + N+ I++ L + +Y + Sbjct: 66 PQALPVIVPPAVGYLVLFIKDTALASQVGVLELNQAGVILSNRGLPTIQVFLAVLGLYFA 125 Query: 377 LSIMIALFMNRLNAKIALK 395 LS + L ++AL Sbjct: 126 LSYPLTRLSRMLEKRLALS 144 >gi|163792348|ref|ZP_02186325.1| ABC polar amino acid transporter, inner membrane subunit [alpha proteobacterium BAL199] gi|159182053|gb|EDP66562.1| ABC polar amino acid transporter, inner membrane subunit [alpha proteobacterium BAL199] Length = 227 Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 56/172 (32%), Positives = 91/172 (52%), Gaps = 14/172 (8%) Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256 GI L L + R F + L +L++ ++ LP LVLI + Y F P +G Sbjct: 42 GIALGLLLAAV-RSFRVRPVNVLIVLFVD--VLRALPPLVLILIIY---FGLPSVG-IRL 94 Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316 G F L++ LS AAF EI SG++++ +GQ EAA + GLT + V+L Sbjct: 95 SG-------FAVLWLVLSLVLAAFAEEIFWSGILSIRKGQWEAARSTGLTFLQTLTHVIL 147 Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368 PQA+R +PPLT++ + + KN++L +G +++ T + +G A ++L Sbjct: 148 PQAVRMTVPPLTNRTIAITKNTALGAVIGVPEILMQAQTAQSFSGNATPLLL 199 >gi|67639860|ref|ZP_00438690.1| histidine transport system permease protein HisQ [Burkholderia mallei GB8 horse 4] gi|121600455|ref|YP_992327.1| histidine ABC transporter, permease protein [Burkholderia mallei SAVP1] gi|124385405|ref|YP_001028961.1| histidine ABC transporter, permease protein [Burkholderia mallei NCTC 10229] gi|126449260|ref|YP_001081124.1| histidine ABC transporter, permease protein [Burkholderia mallei NCTC 10247] gi|166999939|ref|ZP_02265768.1| histidine ABC transporter, permease protein HisQ [Burkholderia mallei PRL-20] gi|254177473|ref|ZP_04884128.1| histidine ABC transporter, permease protein HisQ [Burkholderia mallei ATCC 10399] gi|254199421|ref|ZP_04905787.1| histidine ABC transporter, permease protein HisQ [Burkholderia mallei FMH] gi|254205736|ref|ZP_04912088.1| histidine ABC transporter, permease protein HisQ [Burkholderia mallei JHU] gi|254357893|ref|ZP_04974166.1| histidine ABC transporter, permease protein HisQ [Burkholderia mallei 2002721280] gi|121229265|gb|ABM51783.1| histidine ABC transporter, permease protein [Burkholderia mallei SAVP1] gi|124293425|gb|ABN02694.1| histidine ABC transporter, permease protein [Burkholderia mallei NCTC 10229] gi|126242130|gb|ABO05223.1| histidine ABC transporter, permease protein [Burkholderia mallei NCTC 10247] gi|147749017|gb|EDK56091.1| histidine ABC transporter, permease protein HisQ [Burkholderia mallei FMH] gi|147753179|gb|EDK60244.1| histidine ABC transporter, permease protein HisQ [Burkholderia mallei JHU] gi|148027020|gb|EDK85041.1| histidine ABC transporter, permease protein HisQ [Burkholderia mallei 2002721280] gi|160698512|gb|EDP88482.1| histidine ABC transporter, permease protein HisQ [Burkholderia mallei ATCC 10399] gi|238520468|gb|EEP83928.1| histidine transport system permease protein HisQ [Burkholderia mallei GB8 horse 4] gi|243064057|gb|EES46243.1| histidine ABC transporter, permease protein HisQ [Burkholderia mallei PRL-20] Length = 229 Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 59/186 (31%), Positives = 89/186 (47%), Gaps = 12/186 (6%) Query: 169 MFLNNRG---LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225 MFL G LS T+ SF+LG+V + A +LSR + + LY Sbjct: 1 MFLQGYGPLILSGTWQTVKLAVLSLALSFLLGLVGA--AAKLSR---SRVSNGIGTLY-- 53 Query: 226 TFLIFGLPTLVLIALK-YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284 T LI G+P LVL+ L Y L L + P F + + L A+ E Sbjct: 54 TTLIRGVPDLVLMLLLFYSLQIWLNQLTDLMNWDQIDIDP-FAAGVLVLGFIYGAYFTET 112 Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344 R ++VPRGQ+EA A G+T+ + V+ PQ MR +P + + + L+K+++L + Sbjct: 113 FRGAFLSVPRGQLEAGSAYGMTNWQVFARVMFPQMMRFALPGIGNNWQVLVKSTALVSII 172 Query: 345 GFADLV 350 G AD+V Sbjct: 173 GLADVV 178 >gi|209543095|ref|YP_002275324.1| polar amino acid ABC transporter inner membrane subunit [Gluconacetobacter diazotrophicus PAl 5] gi|209530772|gb|ACI50709.1| polar amino acid ABC transporter, inner membrane subunit [Gluconacetobacter diazotrophicus PAl 5] Length = 217 Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 43/139 (30%), Positives = 73/139 (52%), Gaps = 1/139 (0%) Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316 + G VS ++++ A+ +IAEIV GL +VP Q+EAA+ L L R V++ Sbjct: 80 VAGLDVSERTVAIW-AIGMIATGYIAEIVHGGLRSVPTDQVEAAVTLNLPLLARWRHVIV 138 Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376 PQA+ I+PP + +K+++LA VG +L G + N+ I++ L + +Y + Sbjct: 139 PQALPVIVPPAVGYLVLFIKDTALASQVGVLELNQAGVILSNRGLPTIQVFLAVLGLYFA 198 Query: 377 LSIMIALFMNRLNAKIALK 395 LS + L ++AL Sbjct: 199 LSYPLTRLSRMLEKRLALS 217 >gi|161503949|ref|YP_001571061.1| arginine transporter permease subunit ArtQ [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160865296|gb|ABX21919.1| hypothetical protein SARI_02041 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 238 Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 53/187 (28%), Positives = 95/187 (50%), Gaps = 10/187 (5%) Query: 217 KALPLLYISTFLIFGLPTLVLI---ALKYQLHFDK-PVLGQF-NFIGGSTVSPEFMSLYI 271 + LP + + F+ FG L+L + L F + PV + NF VSP F+ + Sbjct: 55 RGLPEILVVLFIYFGSSQLLLTLSDGVTLNLGFAQIPVQMEIENF----DVSP-FLCGVV 109 Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 ALS AA+ ++ +R L A+P GQ E+ ALGL+ +++PQ R +P L +Q+ Sbjct: 110 ALSLLYAAYASQTLRGALKAIPSGQWESGQALGLSKTAIFFRLVMPQMWRHALPGLGNQW 169 Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 L LLK+++L + DL+ +I +T ++ IYL ++++ + R++ + Sbjct: 170 LVLLKDTALVSLISVNDLMLQTKSIATRTQDPFNWYILAAAIYLVITLISQYILKRIDLR 229 Query: 392 IALKEKK 398 E++ Sbjct: 230 ATRFERR 236 >gi|311107287|ref|YP_003980140.1| ectoine/hydroxyectoine ABC transporter permease EhuD [Achromobacter xylosoxidans A8] gi|310761976|gb|ADP17425.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD [Achromobacter xylosoxidans A8] Length = 223 Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 38/121 (31%), Positives = 70/121 (57%) Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 AL + A + AE+ R+G+ AVPRGQ EAA AL ++ + V+LPQA+ ++P L + Sbjct: 96 ALGLHYATYCAEVYRAGIEAVPRGQWEAATALNMSRWRTAVGVVLPQAIPPVVPALGNYL 155 Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 + + K++ L A+ +L+ I + T + E + + ++L+LS++ A + L A+ Sbjct: 156 VAMFKDTPLLSAITVVELLQQSKMIGSATFRYTEPLTLVGLLFLALSLVAAWGVRGLEAR 215 Query: 392 I 392 + Sbjct: 216 L 216 >gi|310641778|ref|YP_003946536.1| sulfur-containing amino acid abc transporter, permease protein tcym [Paenibacillus polymyxa SC2] gi|309246728|gb|ADO56295.1| Sulfur-containing amino acid ABC transporter, permease protein TcyM [Paenibacillus polymyxa SC2] Length = 236 Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 55/209 (26%), Positives = 105/209 (50%), Gaps = 11/209 (5%) Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248 I V S + G+V+ + T L+R ++ + Y++ I G P L+ + L Y F Sbjct: 25 ITVVSVLAGLVIGII-TALARIYNVPVLSQISHGYVT--FIRGTPMLMHLLLIY---FSL 78 Query: 249 PVL-----GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 P+L F + S P + I+ S + A+++E+VRSG+ +V +GQ+EAA A+ Sbjct: 79 PLLIDAGAKHFGWSLQSKDVPYMVFALISFSITSGAYMSEVVRSGIQSVNKGQIEAAYAV 138 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363 G+T + R ++ PQA +P LT+ + +L S+LA V ++ + + + + Sbjct: 139 GMTTWQVLRRIVFPQAFVVSLPNLTNSVIGMLHGSTLAFTVSVTEIQAQAEILASTNWKY 198 Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392 +E+ + ++ L+++I + KI Sbjct: 199 LEVYIAAALLFWGLTVLIERISGLVEKKI 227 >gi|309779618|ref|ZP_07674377.1| amino acid ABC transporter, permease protein [Ralstonia sp. 5_7_47FAA] gi|308921559|gb|EFP67197.1| amino acid ABC transporter, permease protein [Ralstonia sp. 5_7_47FAA] Length = 248 Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 40/113 (35%), Positives = 64/113 (56%), Gaps = 1/113 (0%) Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321 ++P F ++ + LS + AAF AE +R+G+ AVP +EAA +LG + R+ V LP A+R Sbjct: 100 LTPFFWAVTL-LSLHKAAFHAEALRAGIEAVPPAMLEAATSLGFSARERLWRVQLPLALR 158 Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374 + P L + + L+K SSLA A+ DL I Q +E +++ + Y Sbjct: 159 AAWPSLMNNTVELVKASSLASAIAVGDLTYSALMIWTQRDNVLECMVLLLLFY 211 >gi|311694312|gb|ADP97185.1| ABC transporter, membrane spanning protein [marine bacterium HP15] Length = 217 Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 41/142 (28%), Positives = 80/142 (56%), Gaps = 3/142 (2%) Query: 255 NFIG--GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312 F+G G+ ++P F++ I LS YT AF++E+ RSG +V AA +LG+T + Sbjct: 77 TFVGAMGNPLAP-FVAGSIVLSLYTMAFMSEVFRSGFESVSPSMQTAARSLGMTKWQTIY 135 Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372 + LP +R++ P L+++K+S+L +G+ +L+ +I++T Q +EI++ Sbjct: 136 HIRLPIGLRAVFPSWLGVALSVIKDSALVSVIGYMELLRTSEQLISRTQQPLEILIGVGI 195 Query: 373 IYLSLSIMIALFMNRLNAKIAL 394 Y +S ++ + + K+A+ Sbjct: 196 FYFIISYPLSHYGRYVERKMAI 217 >gi|242239704|ref|YP_002987885.1| arginine transporter permease subunit ArtQ [Dickeya dadantii Ech703] gi|242131761|gb|ACS86063.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya dadantii Ech703] Length = 238 Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 56/188 (29%), Positives = 98/188 (52%), Gaps = 12/188 (6%) Query: 217 KALPLLYISTFLIFGLPTLVL-IALKYQLHFDKPVLGQFNF-----IGGSTVSPEFMSLY 270 + LP + + F+ FG L+L +A + L+ LG F I VSP F+ Sbjct: 55 RGLPEILVVLFIYFGSSQLLLTLADGFTLN-----LGVVQFPVKLNIENFEVSP-FLCGV 108 Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IAL+ AA+ ++ +R L AVPRGQ E+ ALG++ R +++PQ R +P L +Q Sbjct: 109 IALALLYAAYASQTLRGALKAVPRGQWESGQALGMSKSVIFRRLIMPQMWRHALPGLGNQ 168 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 +L LLK+++L + DL+ +I +T + +I IYL+++++ + R+ Sbjct: 169 WLVLLKDTALVSLISVNDLMLQTKSIATRTQEPFTWYMIAAAIYLAITLLSQAILQRIET 228 Query: 391 KIALKEKK 398 + E++ Sbjct: 229 RATRFERR 236 >gi|241554229|ref|YP_002979442.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240863535|gb|ACS61197.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 222 Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 34/107 (31%), Positives = 59/107 (55%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I LS Y AA+ +EI RSG AVP+G +EA + +GLT + R +LLP+ ++PP + Sbjct: 93 IGLSIYGAAYFSEIFRSGFAAVPKGHIEAGLCVGLTQGQIVRRILLPEMTMLVLPPSVNM 152 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377 + L+K +++ + +L + I +Q +E + + Y +L Sbjct: 153 TIILMKETAVLSIITVPELTATLSAIGSQQYAFVEALFVLALFYWAL 199 >gi|327394993|dbj|BAK12415.1| probable amino-acid ABC transporter permease protein YckJ [Pantoea ananatis AJ13355] Length = 245 Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 41/128 (32%), Positives = 71/128 (55%), Gaps = 1/128 (0%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G T+S F + +AL A++AE+ R+G+ +VP+GQ+EAA LG++ R+ V++PQ Sbjct: 82 GITMS-AFTAGVLALGINVGAYLAEVFRAGIQSVPKGQLEAAWILGISRRQRFLNVVMPQ 140 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378 A R++ P + + + LL +SL A+ +L I +T I+ + +YL LS Sbjct: 141 AARAVWPAIINNLIQLLLGTSLLSAIALPELTGTATVINARTLLYIQTFSVVALVYLFLS 200 Query: 379 IMIALFMN 386 + + N Sbjct: 201 NLFSWLGN 208 >gi|291618613|ref|YP_003521355.1| YckJ [Pantoea ananatis LMG 20103] gi|291153643|gb|ADD78227.1| YckJ [Pantoea ananatis LMG 20103] Length = 245 Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 41/128 (32%), Positives = 71/128 (55%), Gaps = 1/128 (0%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G T+S F + +AL A++AE+ R+G+ +VP+GQ+EAA LG++ R+ V++PQ Sbjct: 82 GITMS-AFTAGVLALGINVGAYLAEVFRAGIQSVPKGQLEAAWILGISRRQRFLNVVMPQ 140 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378 A R++ P + + + LL +SL A+ +L I +T I+ + +YL LS Sbjct: 141 AARAVWPAIINNLIQLLLGTSLLSAIALPELTGTATVINARTLLYIQTFSVVALVYLFLS 200 Query: 379 IMIALFMN 386 + + N Sbjct: 201 NLFSWLGN 208 >gi|257455730|ref|ZP_05620958.1| histidine transport system permease protein HisQ [Enhydrobacter aerosaccus SK60] gi|257446858|gb|EEV21873.1| histidine transport system permease protein HisQ [Enhydrobacter aerosaccus SK60] Length = 239 Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 44/132 (33%), Positives = 65/132 (49%), Gaps = 1/132 (0%) Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309 +L QF G VSP F + ALS A+ E R +P+GQ EAA A+G+ + Sbjct: 81 ILSQFGNTGYVDVSP-FWAGVTALSVAFGAYATETFRMAFQEIPKGQAEAAQAIGMKKFQ 139 Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369 V LPQ R +P L + +L LLK+++L VG D++ T T + Sbjct: 140 ILWRVTLPQVWRIALPGLGNLFLVLLKDTALVSVVGLEDIMRHAKTAATSTQSPFTFYMA 199 Query: 370 WMFIYLSLSIMI 381 +YLSL+++I Sbjct: 200 AALLYLSLTVII 211 >gi|209547516|ref|YP_002279434.1| ectoine/hydroxyectoine ABC transporter permease EhuD [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209538760|gb|ACI58694.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 219 Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 35/95 (36%), Positives = 56/95 (58%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I + + A + AE+ R+G+ VPRGQ EAA A LT R+A V+LPQA+ +IP L + Sbjct: 93 IGMGIHYATYTAEVYRAGIENVPRGQWEAAKATNLTTRQAWIHVVLPQAIPPMIPALANY 152 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365 ++ + K + L A+ +L++ +I N + IE Sbjct: 153 FIAMFKETPLLSAITVLELMNQAKSIANSNYRYIE 187 >gi|157369179|ref|YP_001477168.1| polar amino acid ABC transporter inner membrane subunit [Serratia proteamaculans 568] gi|157320943|gb|ABV40040.1| polar amino acid ABC transporter, inner membrane subunit [Serratia proteamaculans 568] Length = 218 Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 36/108 (33%), Positives = 63/108 (58%), Gaps = 1/108 (0%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G VSP + + +AL+ +T+AF+ +I + A+P+GQ EA+ LGL+ + V++PQ Sbjct: 80 GIDVSP-WTAAALALTLFTSAFLVDIWSGSIAALPKGQWEASHCLGLSFGQTLVRVIVPQ 138 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 A+R I P + ++K ++LA +GF +L G + N T Q ++ Sbjct: 139 AVRIAIAPTVGFSVQVIKGTALASIIGFVELTKAGTMLNNVTYQPFKV 186 >gi|152986120|ref|YP_001349969.1| arginine/ornithine transport protein AotQ [Pseudomonas aeruginosa PA7] gi|150961278|gb|ABR83303.1| arginine/ornithine transport protein AotQ [Pseudomonas aeruginosa PA7] Length = 229 Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 42/125 (33%), Positives = 69/125 (55%), Gaps = 9/125 (7%) Query: 231 GLPTLVLIALKYQ-----LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285 G+P LVLI L + L++ P G ++I ++P F+S L A+++E Sbjct: 58 GIPDLVLILLIFYGGQALLNWVAPQFGYDDYI---DLNP-FVSGVGTLGFIFGAYLSETF 113 Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345 R +A+P+GQ EA A G++HR+ V +PQ +R IP T+ +L L+K ++L VG Sbjct: 114 RGAFMAIPKGQGEAGYAYGMSHRQVFFRVQVPQMIRLAIPGFTNNWLVLVKATALISVVG 173 Query: 346 FADLV 350 D++ Sbjct: 174 LQDMM 178 >gi|330500964|ref|YP_004377833.1| amino acid ABC transporter permease [Pseudomonas mendocina NK-01] gi|328915250|gb|AEB56081.1| amino acid ABC transporter, permease protein [Pseudomonas mendocina NK-01] Length = 220 Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 34/94 (36%), Positives = 58/94 (61%), Gaps = 4/94 (4%) Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333 +CYTA E+ R+GL AVPRGQ EA AL ++ A R ++LPQA+R I+P L + + Sbjct: 101 ACYTA----EVYRAGLDAVPRGQWEAVTALNMSPLSAYRQIILPQALRPILPALGNYLVA 156 Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367 +LK++ + A+ +++ I +++ + +E I Sbjct: 157 MLKDTPVLSAITVVEIMQQAKNIGSESFRYLEPI 190 >gi|298504919|gb|ADI83642.1| ABC transporter, membrane protein [Geobacter sulfurreducens KN400] Length = 340 Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 43/182 (23%), Positives = 86/182 (47%), Gaps = 25/182 (13%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 + PLL F+ +GLP+L G T+ P + I L Sbjct: 184 RGTPLLLQLFFIYYGLPSL-----------------------GITLKP-ITAAVIGLGLN 219 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 +A++ EI+R + ++ GQ EAA ALG+T+ + R V++PQ + ++PP+ ++++ L+K Sbjct: 220 YSAYLGEIIRGAIQSIDHGQTEAAKALGMTYGQTMRRVVIPQTYKRLMPPIGNEFIALIK 279 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 +++L + +L+ + N +IL + IYL + ++ + + E Sbjct: 280 DTALVSTIAMVELMRAADQMFNTYFNVTALILAAV-IYLIFTTFFTFLFEKIEHRAGIYE 338 Query: 397 KK 398 ++ Sbjct: 339 RR 340 Score = 37.0 bits (84), Expect = 5.5, Method: Compositional matrix adjust. Identities = 29/101 (28%), Positives = 47/101 (46%), Gaps = 8/101 (7%) Query: 50 NNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDS-SYATAILVGFVNTFWLAFSGMIPAT 108 +N E N + + ER E G V + D + +L G V T L M + Sbjct: 103 DNSEAKNFTASV----ER---EKKPGYVTFLQDCLKFLPVLLKGAVMTLLLVLCTMFISP 155 Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 I G L+ GR+S + ++ +C + +FR P L+ +FF+Y Sbjct: 156 IGGLLIALGRISTFRPLSALCWFVIWLFRGTPLLLQLFFIY 196 >gi|237807674|ref|YP_002892114.1| polar amino acid ABC transporter, inner membrane subunit [Tolumonas auensis DSM 9187] gi|237499935|gb|ACQ92528.1| polar amino acid ABC transporter, inner membrane subunit [Tolumonas auensis DSM 9187] Length = 246 Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 39/136 (28%), Positives = 68/136 (50%), Gaps = 1/136 (0%) Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321 VSP F++ +++ A++AE R ++AV RGQ+EAA A G++ + R VL PQ +R Sbjct: 112 VSP-FIAGVLSIGFIFGAYMAETFRGAILAVERGQLEAAYAYGMSPWQVFRRVLFPQMVR 170 Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 +P + +L LLK ++L +G D+V G T + I+L + + Sbjct: 171 HALPGFGNNWLVLLKTTALVSVIGLDDMVRKAGLAAGSTQLPFTFYMAVALIFLGFTAIS 230 Query: 382 ALFMNRLNAKIALKEK 397 + + A+K + Sbjct: 231 TALLRWAEVRYAIKTR 246 >gi|78067959|ref|YP_370728.1| amino acid ABC transporter inner membrane protein [Burkholderia sp. 383] gi|77968704|gb|ABB10084.1| amino acid ABC transporter membrane protein, PAAT family [Burkholderia sp. 383] Length = 226 Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 46/149 (30%), Positives = 81/149 (54%), Gaps = 14/149 (9%) Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252 SF +G++L+ F L+R F + +A YI +L G P LV + + + + P +G Sbjct: 30 SFAIGLLLA-FGAALTRLFGPRWAQAAVRFYI--WLFRGSPLLVQL---FVIFYGLPSVG 83 Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312 V + I S A+ AE++R + ++P+GQ EAA ++ +T +A R Sbjct: 84 --------IVLDPLTAAVIGFSLNVGAYNAEVIRGVIESIPKGQWEAAYSMAMTRPQALR 135 Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341 +LPQA R +P L++ +++L+K++SLA Sbjct: 136 RAILPQAARVALPALSNSFISLVKDTSLA 164 >gi|311695923|gb|ADP98796.1| amino acid ABC transporter, inner membrane subunit [marine bacterium HP15] Length = 247 Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 38/126 (30%), Positives = 61/126 (48%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+S + + A++ E R +AV GQ+EAA A G T R ++LPQ MR +P Sbjct: 113 FISGVVTIGLIFGAYMTETFRGAFLAVETGQIEAARAYGFTRFHTFRRIMLPQMMRHALP 172 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 L + + LLK ++L +G D+V V + F+YL+L+ LF+ Sbjct: 173 GLGNNWQVLLKTTALVSIIGLTDMVRVAEEAAKAERMPFHFFIPVAFVYLALTAGSELFI 232 Query: 386 NRLNAK 391 L+ + Sbjct: 233 KWLDKR 238 >gi|24379911|ref|NP_721866.1| putative amino acid ABC transporter, integral membrane protein [Streptococcus mutans UA159] gi|290580109|ref|YP_003484501.1| putative amino acid ABC transporter integral membrane protein [Streptococcus mutans NN2025] gi|24377890|gb|AAN59172.1|AE014984_7 putative amino acid ABC transporter, integral membrane protein [Streptococcus mutans UA159] gi|254997008|dbj|BAH87609.1| putative amino acid ABC transporter integral membrane protein [Streptococcus mutans NN2025] Length = 216 Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 36/124 (29%), Positives = 72/124 (58%), Gaps = 4/124 (3%) Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 A + +T+A +AEI+R GL A+ GQ EA +A GLT+ + ++ PQA+R ++P + SQ+ Sbjct: 87 AFTVFTSAALAEIIRGGLNAIDNGQTEAGLAQGLTNSQIFIYIIFPQAIRKMLPAIISQF 146 Query: 332 LNLLKNSS-LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI---YLSLSIMIALFMNR 387 + ++K++S L + +L ++ + +A ++ ++ + Y ++ +I+ F R Sbjct: 147 VTVIKDTSFLYSVIALQELFGKSQILMGKYFEADQVFALYGIVAVTYFIINFIISSFSRR 206 Query: 388 LNAK 391 L K Sbjct: 207 LAKK 210 Score = 44.7 bits (104), Expect = 0.023, Method: Compositional matrix adjust. Identities = 21/61 (34%), Positives = 38/61 (62%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L G T +++F ++ +TI+GT++ R NK + WI +Y+E RN+P L+ IF + Sbjct: 13 LLQGLWLTLYISFISIVLSTILGTILAVMRNGKNKPLRWIASIYIEFVRNVPNLLWIFIV 72 Query: 149 Y 149 + Sbjct: 73 F 73 >gi|13474097|ref|NP_105665.1| amino acid ABC transporter, permease protein [Mesorhizobium loti MAFF303099] gi|14024849|dbj|BAB51451.1| amino acid ABC transporter, permease protein [Mesorhizobium loti MAFF303099] Length = 218 Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 38/109 (34%), Positives = 65/109 (59%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +A++ AA+ EIV +GL AVP GQ EAA+ALGL R+ ++LPQA++ I P LTSQ Sbjct: 91 LAMTLNMAAYTIEIVGAGLDAVPGGQTEAALALGLRPRQVFIKIVLPQALKIIYPALTSQ 150 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379 + ++ S++ + +L + +T ++ E + +YL++S+ Sbjct: 151 IVIMMLESAVVSQIAVRELTYEADMLQARTFRSFETYFVVTLVYLAMSM 199 >gi|322377818|ref|ZP_08052307.1| amino acid ABC transporter, permease protein [Streptococcus sp. M334] gi|321281241|gb|EFX58252.1| amino acid ABC transporter, permease protein [Streptococcus sp. M334] Length = 219 Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 29/73 (39%), Positives = 51/73 (69%) Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 A + +T+A +AEI+R GL AV +GQ EA ++ G T + ++LPQA+R ++P + SQ+ Sbjct: 90 AFTLFTSAALAEIIRGGLNAVDKGQYEAGMSQGFTSAQILYHIILPQAIRKMLPAIISQF 149 Query: 332 LNLLKNSSLAVAV 344 + ++K++SL +V Sbjct: 150 VTVIKDTSLLYSV 162 Score = 38.9 bits (89), Expect = 1.5, Method: Compositional matrix adjust. Identities = 20/61 (32%), Positives = 36/61 (59%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 I GF T +++ ++ AT+IGT++ R N ++ I +Y+E RN+P L+ IF + Sbjct: 16 IFKGFGLTLYISLIAIVLATLIGTVLAVMRNGKNPILRIISSIYIEFVRNVPNLLWIFTI 75 Query: 149 Y 149 + Sbjct: 76 F 76 >gi|300718065|ref|YP_003742868.1| octopine ABC transporter, permease protein [Erwinia billingiae Eb661] gi|299063901|emb|CAX61021.1| octopine ABC transporter, permease protein [Erwinia billingiae Eb661] Length = 228 Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 45/159 (28%), Positives = 83/159 (52%), Gaps = 10/159 (6%) Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY----IALSCYTAAFIA 282 FL G P L+ I + Y LG + I S + P Y +AL AA+ + Sbjct: 56 FLFRGTPLLIQIFMIYY------GLGNISAIRHSFLWPFLRDPYWCGLLALILNDAAYTS 109 Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342 EI+R G+ AVP G +EAA G++ + + LP A+R +P +++ +++ K++SL Sbjct: 110 EILRGGIRAVPAGAIEAARVCGMSKFTILKRITLPIAVRQALPAYSNEVISMAKSTSLVS 169 Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 + D+ + ++ T +A+E+ + IYL++S+++ Sbjct: 170 TISLMDVTGIANAEVSSTYRALEVFISAAVIYLAISLIV 208 >gi|293396872|ref|ZP_06641146.1| arginine ABC superfamily ATP binding cassette transporter, permease protein [Serratia odorifera DSM 4582] gi|291420343|gb|EFE93598.1| arginine ABC superfamily ATP binding cassette transporter, permease protein [Serratia odorifera DSM 4582] Length = 238 Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 54/185 (29%), Positives = 98/185 (52%), Gaps = 8/185 (4%) Query: 217 KALPLLYISTFLIFGLPTLVLI-ALKYQLH---FDKPVLGQFNFIGGSTVSPEFMSLYIA 272 + LP + + F+ FG L+LI + + L+ F+ P+ Q + I VSP F+ IA Sbjct: 55 RGLPEILVVLFIYFGSSQLLLILSDGFTLNLGLFELPI--QID-IENFEVSP-FLCGVIA 110 Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 L+ +A+ ++ +R L AVP+GQ E+ ALGL+ +++PQ R +P L +Q+L Sbjct: 111 LALLYSAYASQTLRGALKAVPQGQWESGQALGLSKAAIFFRLIMPQMWRHALPGLGNQWL 170 Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 LLK+++L + DL+ +I +T + +I IYL ++++ + R+ + Sbjct: 171 VLLKDTALVSLISVNDLMLQTKSIATRTQEPFTWYVIAAAIYLLVTLLSQYVIKRIELRT 230 Query: 393 ALKEK 397 E+ Sbjct: 231 TRFER 235 >gi|291457472|ref|ZP_06596862.1| permease protein of ABC transporter [Bifidobacterium breve DSM 20213] gi|291381307|gb|EFE88825.1| permease protein of ABC transporter [Bifidobacterium breve DSM 20213] Length = 366 Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 31/89 (34%), Positives = 59/89 (66%) Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322 SP + ++ +AL Y + +AE+VRSG+ +P GQ EA++ALGLT ++ + +PQA+ + Sbjct: 141 SPSYWAVVLALVLYNGSVVAELVRSGVGNLPGGQREASLALGLTETQSLIQIEVPQAVYA 200 Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 ++P +Q + +LK+++L + + DL+ Sbjct: 201 MLPAAVTQLVVVLKDTALGSIIMYTDLLQ 229 >gi|190891145|ref|YP_001977687.1| probable amino acid ABC transporter, permease protein [Rhizobium etli CIAT 652] gi|190696424|gb|ACE90509.1| probable amino acid ABC transporter, permease protein [Rhizobium etli CIAT 652] Length = 263 Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 47/163 (28%), Positives = 79/163 (48%), Gaps = 10/163 (6%) Query: 233 PTLVLI-ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291 P LVLI A Y F+ V G + P+++ I L+ +A++AEI R +++ Sbjct: 100 PHLVLIFATTYIFPFEIVVFGNY------LPFPDWLKAVIGLAIPASAYVAEITRGAILS 153 Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 +P Q EAA LG + +A R ++LPQ +R +PP + ++ +SLA VG +L+ Sbjct: 154 IPTTQWEAAKGLGFSRSQALRWIILPQCLRRSLPPWMNILASITMGTSLASLVGVHELLH 213 Query: 352 V---GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 T + + I ++ M + +L IA RL + Sbjct: 214 AATDASTAVRRLDFTIIAYIVVMAAFFTLCYPIARLTRRLERR 256 Score = 36.6 bits (83), Expect = 6.4, Method: Compositional matrix adjust. Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 7/76 (9%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIF----- 146 GF+ ++ S M T++GT+ G +L + V + YV+ FRN P LV+IF Sbjct: 52 GFLMNVVISLSAMTLGTVVGTIFGILQLMPYRPVRYPVVAYVQAFRNAPHLVLIFATTYI 111 Query: 147 FLYKSVL--SVLPIPD 160 F ++ V+ + LP PD Sbjct: 112 FPFEIVVFGNYLPFPD 127 >gi|66046194|ref|YP_236035.1| amino acid ABC transporter permease [Pseudomonas syringae pv. syringae B728a] gi|63256901|gb|AAY37997.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Pseudomonas syringae pv. syringae B728a] Length = 225 Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 39/103 (37%), Positives = 57/103 (55%), Gaps = 3/103 (2%) Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 +A+ AEI+RS LI V +GQ +A AL A R ++LPQA+ +IPP+ +Q + LLK Sbjct: 103 SAYGAEIIRSALINVSQGQRDALRALDFGPISAFRRIILPQALPFMIPPMGNQLVELLKT 162 Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380 +SL + DL G +I GQ LIW + + +M Sbjct: 163 TSLVSLITLTDLTFTGSQLITTLGQQ---TLIWSIVLVCYFVM 202 >gi|117928847|ref|YP_873398.1| polar amino acid ABC transporter, inner membrane subunit [Acidothermus cellulolyticus 11B] gi|117649310|gb|ABK53412.1| amino acid ABC transporter ATP-binding protein, PAAT family / amino acid ABC transporter membrane protein, PAAT family [Acidothermus cellulolyticus 11B] Length = 559 Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 58/167 (34%), Positives = 84/167 (50%), Gaps = 18/167 (10%) Query: 185 TNAKIFVFSFVLGIVLSLFAT--RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY 242 T +I V SF L I S+ RLS+ + LL+ +++ G P L+ Sbjct: 19 TAVEITVISFALAIPPSIAVALMRLSKWRSVRV-----LLWPYVWVMRGTPLLL------ 67 Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302 QL F +L F VSP F + IAL AF EI++ G+ AV Q EA +A Sbjct: 68 QLLFWFDILPTLGF----RVSP-FTTAVIALVLNEIAFSGEIIKGGISAVKSAQREAGLA 122 Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349 LG++ V+LPQA RSI P L+++ + +LKN+SLA + +L Sbjct: 123 LGMSRWTILHRVILPQAFRSIAPALSNELIIMLKNTSLASVIAVDEL 169 >gi|307706134|ref|ZP_07642953.1| binding-protein-dependent transport system inner membrane component family protein [Streptococcus mitis SK321] gi|307618534|gb|EFN97682.1| binding-protein-dependent transport system inner membrane component family protein [Streptococcus mitis SK321] Length = 219 Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 29/73 (39%), Positives = 51/73 (69%) Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 A + +T+A +AEI+R GL AV +GQ EA ++ G T + ++LPQA+R ++P + SQ+ Sbjct: 90 AFTLFTSAALAEIIRGGLNAVDKGQYEAGMSQGFTSAQILYHIILPQAIRKMLPAIISQF 149 Query: 332 LNLLKNSSLAVAV 344 + ++K++SL +V Sbjct: 150 VTVIKDTSLLYSV 162 Score = 38.9 bits (89), Expect = 1.5, Method: Compositional matrix adjust. Identities = 20/61 (32%), Positives = 36/61 (59%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 I GF T +++ ++ AT+IGT++ R N ++ I +Y+E RN+P L+ IF + Sbjct: 16 IFKGFGLTLYISLIAIVLATLIGTVLAVMRNGKNPILRIISSIYIEFVRNVPNLLWIFTI 75 Query: 149 Y 149 + Sbjct: 76 F 76 >gi|229844866|ref|ZP_04465004.1| arginine transporter permease subunit ArtQ [Haemophilus influenzae 6P18H1] gi|229812247|gb|EEP47938.1| arginine transporter permease subunit ArtQ [Haemophilus influenzae 6P18H1] Length = 221 Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 47/172 (27%), Positives = 86/172 (50%), Gaps = 8/172 (4%) Query: 228 LIFGLPTLVLIALKY--QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285 L+ GLP ++++ L Y + + G++ G F ALS AA+ ++ + Sbjct: 53 LLRGLPEIIVVLLVYFGSTELVEMLTGEYIEFGA------FGCGVFALSLIFAAYASQTL 106 Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345 R + A+P GQ E+ ALGL+ +++PQ R +P L++Q+L LLK+++L +G Sbjct: 107 RGAIQAIPTGQWESGAALGLSKSYTFIHIVMPQVWRHALPGLSNQWLVLLKDTALVSLIG 166 Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 DL+ I T Q I IYL+++++ + + +L + E+ Sbjct: 167 VDDLMRQADLINTNTHQPFTWYGIAALIYLAVTLISQVGIRKLELRFTRFER 218 >gi|330812508|ref|YP_004356970.1| putative ABC transporter, permease component [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327380616|gb|AEA71966.1| putative ABC transporter, permease component [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 226 Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 38/134 (28%), Positives = 73/134 (54%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 E+ + +A+ A+ EI+R+G+ A+PRGQ+EAA AL ++ +A R V+L A+ + Sbjct: 89 EWQAAVLAMVINLGAYSTEIIRAGIQAIPRGQLEAAAALAMSRFEAFRHVVLLPALGKVW 148 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 P L+SQ + ++ S++ + +L I ++ +A E + IYL ++++I F Sbjct: 149 PALSSQIIIVMLGSAVCSQIATEELSFAANFIQSRNFRAFETYALTTLIYLCMALLIRQF 208 Query: 385 MNRLNAKIALKEKK 398 +N + + K Sbjct: 209 LNWVGRRCLYKSSN 222 >gi|291561847|emb|CBL40647.1| amino acid ABC transporter membrane protein, PAAT family (TC 3.A.1.3.-) [butyrate-producing bacterium SS3/4] Length = 219 Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 34/115 (29%), Positives = 68/115 (59%), Gaps = 1/115 (0%) Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 AA+ AEI RSG+ ++P GQ EAA LG T + ++LPQ ++ I+P +T++ + L+K+ Sbjct: 102 AAYFAEIYRSGIQSMPIGQYEAAQILGYTKAQTFFKIILPQVIKRILPSITNEVITLVKD 161 Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 +SL+ + A++ ++ + I + +F Y+ ++++A+ M + K+ Sbjct: 162 TSLSFTLSVAEMFTIAKALAASQTNMIPFVAAGIFYYV-FNLIVAVVMEWIEKKL 215 >gi|282857470|ref|ZP_06266702.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Pyramidobacter piscolens W5455] gi|282584689|gb|EFB90025.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Pyramidobacter piscolens W5455] Length = 150 Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 41/130 (31%), Positives = 72/130 (55%), Gaps = 10/130 (7%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + L+ + A+++EI+R +AV RGQ+EAA ++ LT + RL+++PQA+ +P + + Sbjct: 24 LTLALNSGAYMSEIIRGAFLAVDRGQIEAAKSINLTRMQTLRLIVIPQAVPVAVPGIVNN 83 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM---IALFMNR 387 ++ +K SSLA +G D+ +V Q G I + Y+S+ IM I L + + Sbjct: 84 LIDAIKGSSLAFTIGILDITAVAKI---QAG----ITFRYFEAYMSMVIMYWLIVLALEQ 136 Query: 388 LNAKIALKEK 397 L + K K Sbjct: 137 LQKRCEDKLK 146 >gi|218892769|ref|YP_002441638.1| putative permease of ABC transporter [Pseudomonas aeruginosa LESB58] gi|218772997|emb|CAW28809.1| probable permease of ABC transporter [Pseudomonas aeruginosa LESB58] Length = 214 Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 37/128 (28%), Positives = 73/128 (57%), Gaps = 4/128 (3%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + L Y AA+ E+VR G+++VP AA +LGL++R+ ++LP A R P + Sbjct: 91 LVLGVYAAAYCTEVVRGGVLSVPPSVRRAARSLGLSYRQDLFHIVLPMAARVAFPGWVNL 150 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 L+++K++SL + +G +L+ TI+ + + + ++ I +Y +S +IA RL A Sbjct: 151 TLSVMKDTSLVLWIGIVELLRASQTIVTRIQEPLFVLCIAGLVYYLMSWVIA----RLGA 206 Query: 391 KIALKEKK 398 ++ + ++ Sbjct: 207 RLERRWQQ 214 >gi|324992109|gb|EGC24031.1| ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK405] gi|324994203|gb|EGC26117.1| ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK678] gi|325693722|gb|EGD35641.1| ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK150] gi|327459420|gb|EGF05766.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK1] gi|327472828|gb|EGF18255.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK408] Length = 225 Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 48/185 (25%), Positives = 88/185 (47%), Gaps = 23/185 (12%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY---QLHFD 247 + S +LG + + T H K + L Y+ I +P LVL+ L Y +FD Sbjct: 34 IISLILGTIFGIIMTS-----HSKVVRFLSRAYLE--FIRVMPQLVLLFLVYFGLARNFD 86 Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307 + G+ +S I S + A + ++VR + ++P+ Q E+ ALGL+ Sbjct: 87 INISGE-------------LSAIIVFSLWGTAEMGDLVRGAITSLPKHQFESGQALGLSQ 133 Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367 R+ +++PQ +R ++P + ++K +SL V +G ++V VG II+ +I Sbjct: 134 RQLYVYIIIPQVLRRLLPQAINLITRMIKTTSLIVLIGVIEVVKVGQQIIDSNRLSIPSA 193 Query: 368 LIWMF 372 W++ Sbjct: 194 AFWIY 198 >gi|158423461|ref|YP_001524753.1| polar amino acid ABC transporter permease [Azorhizobium caulinodans ORS 571] gi|158330350|dbj|BAF87835.1| polar amino acid uptake family ABC transporter permease protein 1 [Azorhizobium caulinodans ORS 571] Length = 252 Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 45/124 (36%), Positives = 69/124 (55%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I+LS + A+ EI RSGL AVPR EAA ALG T R VLLP A+R +P L + Sbjct: 120 ISLSLFAGAYNVEIFRSGLEAVPRTTSEAAEALGYTRIGVYRHVLLPLALRICLPALNNN 179 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 +NLLK ++LA A+ + + V I N + ++++ + +Y L ++ M+R Sbjct: 180 LVNLLKTTTLAYAIAVPETLYVSKQIWNDSQNVPVMMVVLLLVYTGLVGILVYIMHRWER 239 Query: 391 KIAL 394 +A+ Sbjct: 240 ALAI 243 >gi|302337440|ref|YP_003802646.1| polar amino acid ABC transporter inner membrane subunit [Spirochaeta smaragdinae DSM 11293] gi|301634625|gb|ADK80052.1| polar amino acid ABC transporter, inner membrane subunit [Spirochaeta smaragdinae DSM 11293] Length = 217 Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 33/97 (34%), Positives = 54/97 (55%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P F I ++ AFI+EI+R + A+PRG EA +LGL+ R +LPQA+R Sbjct: 86 PAFFCGLIGVALNEGAFISEIIRGYIEALPRGDWEAGESLGLSRFSVIRYAILPQALRDS 145 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 +P +T Q ++K++SL + ++L +I +T Sbjct: 146 VPAVTGQISIIIKDTSLFSMIMISELTRTANSIYTRT 182 >gi|257876302|ref|ZP_05655955.1| amino acid ABC transporter [Enterococcus casseliflavus EC20] gi|257810468|gb|EEV39288.1| amino acid ABC transporter [Enterococcus casseliflavus EC20] Length = 214 Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 44/176 (25%), Positives = 90/176 (51%), Gaps = 25/176 (14%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 + PLL F+ +GLP L ++ FD+ F + IA Sbjct: 60 RGTPLLLQLIFVFYGLPILGIV-------FDR-----------------FEAALIAFIIN 95 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 AA+ AEI R G+ ++P GQ EAA L L+ + + +++PQ ++ +P + ++ +NL+K Sbjct: 96 YAAYFAEIFRGGIQSIPAGQYEAAKVLRLSPIQTIQKIIIPQVVKITLPSVGNEVINLVK 155 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 ++SL +G +D++ +G + + + ++ + + IYL ++ + L + ++ K+ Sbjct: 156 DTSLVYILGLSDVMRIGKIAMERDSTLLPLVGVGL-IYLVMTGVFTLLLKQIETKL 210 >gi|148545554|ref|YP_001265656.1| polar amino acid ABC transporter inner membrane subunit [Pseudomonas putida F1] gi|167031322|ref|YP_001666553.1| polar amino acid ABC transporter inner membrane subunit [Pseudomonas putida GB-1] gi|148509612|gb|ABQ76472.1| polar amino acid ABC transporter, inner membrane subunit [Pseudomonas putida F1] gi|166857810|gb|ABY96217.1| polar amino acid ABC transporter, inner membrane subunit [Pseudomonas putida GB-1] gi|313496644|gb|ADR58010.1| Polar amino acid ABC transporter, inner membrane subunit [Pseudomonas putida BIRD-1] Length = 230 Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 49/188 (26%), Positives = 92/188 (48%), Gaps = 13/188 (6%) Query: 214 KTGKALPLLYISTF---LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP-----E 265 KT PL ++ F L+ G+P L+ + L Y F +G N +G + P Sbjct: 41 KTSPLKPLQWLGGFYSTLVRGVPELLWVLLIY---FG--TVGLMNSLGEALNMPGLELSA 95 Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + IAL A+ E+ R ++A+P+G EA +ALGL+ + ++LPQ R +P Sbjct: 96 FAAGVIALGLCFGAYATEVFRGAILAIPKGHREAGLALGLSKGRILSRIILPQMWRIALP 155 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 L + ++ L+K+++L +G +++ + T + ++ IYL L+++ M Sbjct: 156 GLGNLFMILMKDTALVSVIGLEEIMRHSQIGVTVTKEPFTFYMVAACIYLGLTVLAMTGM 215 Query: 386 NRLNAKIA 393 + + + A Sbjct: 216 HFMEKRAA 223 >gi|33595380|ref|NP_883023.1| putative permease component of ABC transporter [Bordetella parapertussis 12822] gi|33565458|emb|CAE40091.1| putative permease component of ABC transporter [Bordetella parapertussis] Length = 216 Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 37/123 (30%), Positives = 73/123 (59%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +AL +AA+++E RSG++ V RGQ+EAA +LG+ ++ ++LPQA+R P + ++ Sbjct: 90 LALLLCSAAYLSENFRSGILGVDRGQIEAAQSLGMGAARSLFRIILPQAIRIAAPTMGTR 149 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 Y+ L+K++SLA + L + I + T + +E+ +I +Y ++ M+ + + Sbjct: 150 YIALMKDTSLASTITVVKLTKMAEQIGSNTFRYMEMFIIAGALYWVINQMLTFIQVWVES 209 Query: 391 KIA 393 K+ Sbjct: 210 KLG 212 >gi|115360582|ref|YP_777719.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria AMMD] gi|115285910|gb|ABI91385.1| amino acid ABC transporter membrane protein 1, PAAT family [Burkholderia ambifaria AMMD] Length = 240 Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 53/197 (26%), Positives = 97/197 (49%), Gaps = 12/197 (6%) Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL----GQFNFIGGST 261 +LSRH ++ + L LY + F G+P L++I Y +F L GQ+ G Sbjct: 47 KLSRH---RSARLLGDLYTTVFR--GVPELLVI---YLFYFGGSTLVTTVGQWFGAEGFI 98 Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321 P F+ +A+ + A+ AE+ R+ ++AV +G++EAA A+G+ R +L+PQ +R Sbjct: 99 GVPPFVIGALAVGMISGAYQAEVYRAAVLAVSKGELEAARAIGMPRAMVLRRILVPQVLR 158 Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 +P + + + LK+S+L G A+L+ + T Q + +YL ++ + Sbjct: 159 FALPGIGNVWQLSLKDSALISVTGLAELLRTSQIAASSTHQYFVFFVAGGALYLVMTGLS 218 Query: 382 ALFMNRLNAKIALKEKK 398 NR A + ++ Sbjct: 219 NRVFNRAEAIVGRSFRR 235 >gi|182438504|ref|YP_001826223.1| putative amino acid ABC transporter permease protein [Streptomyces griseus subsp. griseus NBRC 13350] gi|326779150|ref|ZP_08238415.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD [Streptomyces cf. griseus XylebKG-1] gi|178467020|dbj|BAG21540.1| putative amino acid ABC transporter permease protein [Streptomyces griseus subsp. griseus NBRC 13350] gi|326659483|gb|EGE44329.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD [Streptomyces cf. griseus XylebKG-1] gi|327187182|dbj|BAK08924.1| putative amino acid ABC transporter permease protein [Streptomyces griseus] Length = 213 Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 36/134 (26%), Positives = 72/134 (53%), Gaps = 1/134 (0%) Query: 260 STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319 +TV P ++ + + L + AA+ +E+ R+G+ VP+GQ EA AL L+ R+ + V+LPQA Sbjct: 80 TTVEPLYIGITV-LGVHYAAYTSEVYRAGIDGVPKGQWEACRALSLSPRRTWQAVILPQA 138 Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379 +R+++P L + +++ K + + ++V + E+ + I+L S Sbjct: 139 VRNVLPALGNYAISMFKETPFLAVITVQEMVFEARKYGAEQFAYTEVFTLAGLIFLVASY 198 Query: 380 MIALFMNRLNAKIA 393 +L M +L ++ Sbjct: 199 PTSLLMRKLEKRLG 212 >gi|308513288|ref|NP_951856.3| amino acid ABC transporter permease [Geobacter sulfurreducens PCA] gi|39982669|gb|AAR34129.1| amino acid ABC transporter, permease protein [Geobacter sulfurreducens PCA] Length = 266 Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 42/182 (23%), Positives = 86/182 (47%), Gaps = 25/182 (13%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 + PLL F+ +GLP+L G T+ P + I L Sbjct: 110 RGTPLLLQLFFIYYGLPSL-----------------------GITLKP-ITAAVIGLGLN 145 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 +A++ EI+R + ++ GQ EAA ALG+T+ + R V++PQ + ++PP+ ++++ L+K Sbjct: 146 YSAYLGEIIRGAIQSIDHGQTEAAKALGMTYGQTMRRVVIPQTYKRLMPPIGNEFIALIK 205 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 +++L + +L+ + N ++L + IYL + ++ + + E Sbjct: 206 DTALVSTIAMVELMRAADQMFNTYFNVTALVLAAV-IYLIFTTFFTFLFEKIEHRAGIYE 264 Query: 397 KK 398 ++ Sbjct: 265 RR 266 Score = 37.7 bits (86), Expect = 3.4, Method: Compositional matrix adjust. Identities = 29/101 (28%), Positives = 47/101 (46%), Gaps = 8/101 (7%) Query: 50 NNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDS-SYATAILVGFVNTFWLAFSGMIPAT 108 +N E N + + ER E G V + D + +L G V T L M + Sbjct: 29 DNSEAKNFTASV----ER---EKKPGYVTFLQDCLKFLPVLLKGAVMTLLLVLCTMFISP 81 Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 I G L+ GR+S + ++ +C + +FR P L+ +FF+Y Sbjct: 82 IGGLLIALGRISTFRPLSALCWFVIWLFRGTPLLLQLFFIY 122 >gi|149925442|ref|ZP_01913706.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Limnobacter sp. MED105] gi|149825559|gb|EDM84767.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Limnobacter sp. MED105] Length = 332 Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 33/86 (38%), Positives = 52/86 (60%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + ++ ++AA++AE++R GL AVP GQ +AA ALGL + V+LPQA+R+ +P Sbjct: 208 FTRVLFTIALFSAAYLAEVLRGGLQAVPAGQGQAAKALGLNRVQRNVHVVLPQAIRACLP 267 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVS 351 L + ++ L K SL V +L Sbjct: 268 SLINSFVTLFKECSLVTIVALFELTG 293 >gi|256827732|ref|YP_003151691.1| amino acid ABC transporter membrane protein [Cryptobacterium curtum DSM 15641] gi|256583875|gb|ACU95009.1| amino acid ABC transporter membrane protein [Cryptobacterium curtum DSM 15641] Length = 212 Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 30/79 (37%), Positives = 50/79 (63%) Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 AA+ AEI RSG+ ++PRGQ EAA LG T + ++LPQ + I+P + ++ + L+K+ Sbjct: 94 AAYFAEIYRSGIQSIPRGQYEAAEVLGYTRGQTFMRIVLPQVFKRILPSMGNEVITLVKD 153 Query: 338 SSLAVAVGFADLVSVGGTI 356 +SLA +G ++ + I Sbjct: 154 TSLAFVLGIMEMFTQAKAI 172 >gi|116696425|ref|YP_842001.1| ABC-type transporter, permease component [Ralstonia eutropha H16] gi|113530924|emb|CAJ97271.1| ABC-type transporter, permease component [Ralstonia eutropha H16] Length = 246 Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 45/129 (34%), Positives = 70/129 (54%), Gaps = 4/129 (3%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 E ++ ++ Y +AF A+ + +G+ AVPRGQ AA+ALG R A ++LPQA+R Sbjct: 111 EALASVFGIALYASAFYAQELEAGIAAVPRGQFAAALALGFAPRAAWWRIVLPQALRIAA 170 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY----LSLSIM 380 P+ Q+ +KN+SLA+A+GFA+L + T A + I +Y LSL + Sbjct: 171 RPMVGQFCQTIKNTSLAMAIGFAELSYTARQVETDTLMAFQAFGIATLLYAALILSLQAV 230 Query: 381 IALFMNRLN 389 + RL Sbjct: 231 APALLRRLG 239 >gi|310767150|gb|ADP12100.1| arginine transporter permease subunit ArtQ [Erwinia sp. Ejp617] Length = 238 Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 55/186 (29%), Positives = 95/186 (51%), Gaps = 12/186 (6%) Query: 217 KALPLLYISTFLIFGLPTLVLI---ALKYQLHFDK-PVLGQFNFIGGSTVSPEFMSLYIA 272 +ALP + + F+ FG L+LI L F + PV Q N I VSP F+ IA Sbjct: 55 RALPEILVVLFIYFGASQLLLILSDGFTINLAFVQIPV--QVN-IENFDVSP-FLCGVIA 110 Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 L+ +++ ++ +R L AVP GQ E+ ALG+ +++PQ R +P L +Q+L Sbjct: 111 LAILYSSYASQTLRGALQAVPLGQWESGQALGMKKSAVFLRLIVPQMWRHALPGLGNQWL 170 Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 LLK+++L + D++ +I +T + W I ++ ++I LF ++ +I Sbjct: 171 VLLKDTALVSLISVNDIMLQTKSIATRTQEP----FTWYVIAAAIYLVITLFSQQVLKRI 226 Query: 393 ALKEKK 398 L+ + Sbjct: 227 ELRATR 232 >gi|158321702|ref|YP_001514209.1| polar amino acid ABC transporter, inner membrane subunit [Alkaliphilus oremlandii OhILAs] gi|158141901|gb|ABW20213.1| polar amino acid ABC transporter, inner membrane subunit [Alkaliphilus oremlandii OhILAs] Length = 221 Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 46/159 (28%), Positives = 85/159 (53%), Gaps = 5/159 (3%) Query: 243 QLHFDKPVLGQFNFI--GGSTVS---PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQM 297 +L + P+L Q F+ G + V E S I LS +++AE R GL AV + Q+ Sbjct: 60 ELSRNTPLLIQLYFLYFGLTKVGIVLSENTSAIIGLSFLGGSYMAEAFRGGLEAVSKFQI 119 Query: 298 EAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII 357 E+ ++LGL+ + R +++PQA+ +P + + + LLK +S+ A+ DL++V +I Sbjct: 120 ESGLSLGLSKMQIVRHIMIPQAISFSVPAIGANCIFLLKETSIFGAISTLDLMNVTKDLI 179 Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 Q + +L+ + YL + + ++ F+ L K+ E Sbjct: 180 GMYYQTFDSLLMLVVAYLIILLPLSFFLTWLERKVRYAE 218 >gi|330502656|ref|YP_004379525.1| arginine/ornithine ABC transporter permease [Pseudomonas mendocina NK-01] gi|328916942|gb|AEB57773.1| arginine/ornithine ABC transporter, permease protein [Pseudomonas mendocina NK-01] Length = 229 Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 49/168 (29%), Positives = 92/168 (54%), Gaps = 12/168 (7%) Query: 228 LIFGLPTLVLIALKYQLHFD-----KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282 +I G+P LVLI L + D P+LG ++I ++P F++ L A+++ Sbjct: 55 VIRGIPELVLILLIFFGGQDLVNRIAPLLGHEDYI---DINP-FVAGVGTLGFIYGAYLS 110 Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342 E R +A+P+GQ EA +A G++ + +L+PQ +R IP +T+ +L L+K ++L Sbjct: 111 ETFRGAFMAIPKGQGEAGMAYGMSPLRVFLRILVPQMIRMAIPGITNNWLVLVKATALIS 170 Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYL---SLSIMIALFMNR 387 VG D+++ + + T + IL+ +YL S+S+++ ++ R Sbjct: 171 LVGLQDMMARAKSAGDATREPFIYILLVAAVYLAITSVSLLVLRYIER 218 >gi|156934640|ref|YP_001438556.1| arginine transporter permease subunit ArtQ [Cronobacter sakazakii ATCC BAA-894] gi|156532894|gb|ABU77720.1| hypothetical protein ESA_02474 [Cronobacter sakazakii ATCC BAA-894] Length = 238 Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 55/187 (29%), Positives = 94/187 (50%), Gaps = 10/187 (5%) Query: 217 KALPLLYISTFLIFGLPTLVLI---ALKYQLHFDK-PVLGQF-NFIGGSTVSPEFMSLYI 271 + LP + + F+ FG L+L L F PV Q NF VSP F+ I Sbjct: 55 RGLPEILVVLFIYFGSSQLLLTLSDGFTIPLGFTSIPVQVQIDNF----DVSP-FLCGVI 109 Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 AL+ +A+ ++ +R L AVP GQ E+ ALGL+ +++PQ R +P L +Q+ Sbjct: 110 ALALLYSAYASQTLRGALKAVPHGQWESGQALGLSKSAIFFRLVMPQMWRHALPGLGNQW 169 Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 L LLK+++L + DL+ +I +T + +I IYL ++++ + R++ + Sbjct: 170 LVLLKDTALVSLISVNDLMLQTKSIATRTQEPFTWYIIAAAIYLVITLISQYILKRIDLR 229 Query: 392 IALKEKK 398 E++ Sbjct: 230 ATRFERR 236 >gi|326318472|ref|YP_004236144.1| polar amino acid ABC transporter inner membrane subunit [Acidovorax avenae subsp. avenae ATCC 19860] gi|323375308|gb|ADX47577.1| polar amino acid ABC transporter, inner membrane subunit [Acidovorax avenae subsp. avenae ATCC 19860] Length = 220 Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 50/169 (29%), Positives = 86/169 (50%), Gaps = 34/169 (20%) Query: 188 KIFVFSFVLGIVLS----------LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVL 237 K+ SFV G++L L R + +T + +P + + F++F LP L Sbjct: 24 KLTALSFVPGVLLGMGVAMLRLFPLPPLRWVLTLYVETFRNIPSVALLIFIVFALPDL-- 81 Query: 238 IALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQM 297 ++ + ++ V+ L + L C +AF A+ VRSG+ +P GQ+ Sbjct: 82 ---EFVIDYEPSVV-----------------LTLVLVC--SAFTADYVRSGINTIPGGQV 119 Query: 298 EAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346 EAA++LG+ + V+LPQA+RS++ P+TS + L+ ++SLA V F Sbjct: 120 EAALSLGMRPARIIWSVVLPQALRSVVQPMTSLLIALMLSTSLASQVPF 168 >gi|307708311|ref|ZP_07644778.1| ABC transporter membrane-spanning permease - glutamine transport [Streptococcus mitis NCTC 12261] gi|307615757|gb|EFN94963.1| ABC transporter membrane-spanning permease - glutamine transport [Streptococcus mitis NCTC 12261] Length = 219 Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 29/73 (39%), Positives = 51/73 (69%) Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 A + +T+A +AEI+R GL AV +GQ EA ++ G T + ++LPQA+R ++P + SQ+ Sbjct: 90 AFTLFTSAALAEIIRGGLNAVDKGQYEAGMSQGFTSAQILYHIILPQAIRKMLPAIISQF 149 Query: 332 LNLLKNSSLAVAV 344 + ++K++SL +V Sbjct: 150 VTVIKDTSLLYSV 162 Score = 38.9 bits (89), Expect = 1.5, Method: Compositional matrix adjust. Identities = 19/61 (31%), Positives = 36/61 (59%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 I GF T +++ ++ +T+IGT++ R N ++ I +Y+E RN+P L+ IF + Sbjct: 16 IFKGFCLTLYISLIAIVLSTLIGTVLAVMRNGKNPILRIISSIYIEFVRNVPNLLWIFTI 75 Query: 149 Y 149 + Sbjct: 76 F 76 >gi|295111595|emb|CBL28345.1| amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Synergistetes bacterium SGP1] Length = 220 Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 35/117 (29%), Positives = 68/117 (58%), Gaps = 4/117 (3%) Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 ++A+++EI+R +AV RGQ+EAA ++ L+ + RL+++PQA+ +P + + ++ +K Sbjct: 100 SSAYLSEIIRGAFLAVDRGQIEAAKSINLSRMQTLRLIVIPQAIPVAVPGIVNVLIDAIK 159 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIE----IILIWMFIYLSLSIMIALFMNRLN 389 SSLA +G D+ +V T + E +++++ FI L L M + R+ Sbjct: 160 GSSLAFTIGILDITAVAKIQAGITFRYFEAYMAMVMMYWFIVLVLEQMQKRYEQRIK 216 >gi|251792008|ref|YP_003006728.1| arginine transporter permease subunit ArtQ [Aggregatibacter aphrophilus NJ8700] gi|247533395|gb|ACS96641.1| histidine transport system permease protein HisQ [Aggregatibacter aphrophilus NJ8700] Length = 221 Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 57/210 (27%), Positives = 103/210 (49%), Gaps = 13/210 (6%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY--QLHFDK 248 V S V G++LS+ L + GK + +L L+ GLP ++++ L Y + Sbjct: 21 VCSLVAGLLLSMLFAVLEAN--RVVGKPMAVL---VALLRGLPEILVVLLVYFGSSEVVE 75 Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308 + G++ G F ALS AA+ ++ +R + A+P+GQ E+ ALGL+ Sbjct: 76 MITGEYIEFGA------FGCGVFALSLIFAAYASQTLRGAIQAIPKGQWESGAALGLSKG 129 Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368 +++PQ R +P L++Q+L LLK+++L +G DL+ I T Q Sbjct: 130 YTFLHIIMPQVWRHALPGLSNQWLVLLKDTALISLIGVDDLMRQAQLINTNTHQPFTWYG 189 Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 I IYL ++++ + + +L + E++ Sbjct: 190 IAALIYLVVTLVSQVGIRKLELRFTRFERE 219 >gi|162148489|ref|YP_001602950.1| putative inner membrane amino-acid ABC transporter permease [Gluconacetobacter diazotrophicus PAl 5] gi|161787066|emb|CAP56653.1| putative inner membrane amino-acid ABC transporter permease [Gluconacetobacter diazotrophicus PAl 5] Length = 219 Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 40/123 (32%), Positives = 71/123 (57%), Gaps = 1/123 (0%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G VSP F S++I ++ A ++A+IV +GL VP +AA +LGLT R+A V+ P Sbjct: 83 GVMVSP-FASVFIGMALNAAGYLADIVTTGLGRVPPLYHDAAASLGLTRRQAYMRVIFPH 141 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378 A++++ P L + + ++ SS+A G DL + + T + +E++L+ +Y LS Sbjct: 142 ALQTMAPALANHFQIMILGSSMASIFGVEDLTGRAYDVGSTTFRILEVMLVAGVLYALLS 201 Query: 379 IMI 381 + + Sbjct: 202 VAL 204 >gi|163868659|ref|YP_001609868.1| glutamate/aspartate transport system permease protein [Bartonella tribocorum CIP 105476] gi|161018315|emb|CAK01873.1| glutamate/aspartate transport system permease protein [Bartonella tribocorum CIP 105476] Length = 238 Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 30/89 (33%), Positives = 58/89 (65%), Gaps = 1/89 (1%) Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315 F+ G+++ +L I + + A+ AEI+R+G+ +VP+GQ A ALG+T+ ++ +V+ Sbjct: 99 FLTGTSIGANKSAL-ITFTAFETAYFAEIMRAGINSVPQGQKYAGQALGMTYWQSMYIVI 157 Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344 LPQA R ++P +Q + L ++++L A+ Sbjct: 158 LPQAFRDMLPVFLTQVIILFQDTTLVYAI 186 >gi|148988973|ref|ZP_01820373.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP6-BS73] gi|147925470|gb|EDK76547.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP6-BS73] Length = 219 Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 29/73 (39%), Positives = 51/73 (69%) Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 A + +T+A +AEI+R GL AV +GQ EA ++ G T + ++LPQA+R ++P + SQ+ Sbjct: 90 AFTLFTSAALAEIIRGGLNAVDKGQYEAGMSQGFTSAQILYYIILPQAIRKMLPAIISQF 149 Query: 332 LNLLKNSSLAVAV 344 + ++K++SL +V Sbjct: 150 VPVIKDTSLLYSV 162 Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust. Identities = 21/61 (34%), Positives = 36/61 (59%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 I GF T +++ +I +TIIGT++ R N ++ I +Y+E RN+P L+ IF + Sbjct: 16 IFKGFGLTLYISLIAIILSTIIGTVLAVMRNGKNPILRIISSIYIEFVRNVPNLLWIFTI 75 Query: 149 Y 149 + Sbjct: 76 F 76 >gi|295675492|ref|YP_003604016.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. CCGE1002] gi|295435335|gb|ADG14505.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. CCGE1002] Length = 238 Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 39/122 (31%), Positives = 69/122 (56%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IAL A+++E+ R+G+ +VPRGQ+EAA LGL + V+LPQA R++ P + + Sbjct: 93 IALGLNVGAYLSEVFRAGIQSVPRGQIEAAGILGLERAQIFVEVVLPQATRAVYPAIVNY 152 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 + LL +SL A+ +L I ++T ++ + + YL LS +++ +L A Sbjct: 153 LIQLLLGTSLLSAIALPELTGTATVINSRTLLYLQTFSVTLVAYLVLSNVLSWLAAQLGA 212 Query: 391 KI 392 ++ Sbjct: 213 RL 214 >gi|168492768|ref|ZP_02716911.1| ABC transporter membrane-spanning permease - glutamine transport [Streptococcus pneumoniae CDC3059-06] gi|183576840|gb|EDT97368.1| ABC transporter membrane-spanning permease - glutamine transport [Streptococcus pneumoniae CDC3059-06] Length = 219 Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 29/73 (39%), Positives = 51/73 (69%) Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 A + +T+A +AEI+R GL AV +GQ EA ++ G T + ++LPQA+R ++P + SQ+ Sbjct: 90 AFTLFTSAALAEIIRGGLNAVDKGQYEAGMSQGFTSAQILYYIILPQAIRKMLPAIISQF 149 Query: 332 LNLLKNSSLAVAV 344 + ++K++SL +V Sbjct: 150 VPVIKDTSLLYSV 162 Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust. Identities = 21/61 (34%), Positives = 36/61 (59%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 I GF T +++ +I +TIIGT++ R N ++ I +Y+E RN+P L+ IF + Sbjct: 16 IFKGFGLTLYISLIAIILSTIIGTVLAVMRNGKNPILRIISSIYIEFVRNVPNLLWIFTI 75 Query: 149 Y 149 + Sbjct: 76 F 76 >gi|291544977|emb|CBL18086.1| amino acid ABC transporter membrane protein, PAAT family (TC 3.A.1.3.-) [Ruminococcus sp. 18P13] Length = 216 Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 39/140 (27%), Positives = 76/140 (54%), Gaps = 3/140 (2%) Query: 256 FIGGSTVSPE--FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313 FI G ++ E F+++ I AA+ AEI R G+ ++P GQ EAA LG + + Sbjct: 75 FIFGIRITNEYRFIAVIIGFVLNYAAYFAEIYRGGIQSIPVGQYEAAKVLGYSRAQCFGR 134 Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI 373 +++PQ ++ IIP LT++ + L+K++SL+ A+ ++ + I +F Sbjct: 135 IIMPQVIKRIIPALTNEIITLIKDTSLSFALAVPEMFTTAKAIAAADKTMTAFAAAGVFY 194 Query: 374 YLSLSIMIALFMNRLNAKIA 393 Y+ ++++A M ++ K++ Sbjct: 195 YV-FNLLVAGIMRKVEQKLS 213 >gi|237801379|ref|ZP_04589840.1| amino acid ABC transporter permease [Pseudomonas syringae pv. oryzae str. 1_6] gi|237806662|ref|ZP_04593366.1| amino acid ABC transporter permease [Pseudomonas syringae pv. oryzae str. 1_6] gi|331024238|gb|EGI04295.1| amino acid ABC transporter permease [Pseudomonas syringae pv. oryzae str. 1_6] gi|331027776|gb|EGI07831.1| amino acid ABC transporter permease [Pseudomonas syringae pv. oryzae str. 1_6] Length = 225 Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 37/103 (35%), Positives = 57/103 (55%), Gaps = 3/103 (2%) Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 +A+ +EI+RS LI V +GQ +A AL A R ++LPQA+ +IPP+ +Q + LLK Sbjct: 103 SAYGSEIIRSALINVSKGQRDALRALDFGPVNAFRRIILPQALPFMIPPMGNQLVELLKT 162 Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380 +SL + DL G ++ GQ LIW + + +M Sbjct: 163 TSLVSLITLTDLTFTGSQLVTTLGQQ---TLIWSIVLICYFVM 202 >gi|225350816|ref|ZP_03741839.1| hypothetical protein BIFPSEUDO_02386 [Bifidobacterium pseudocatenulatum DSM 20438] gi|225158272|gb|EEG71514.1| hypothetical protein BIFPSEUDO_02386 [Bifidobacterium pseudocatenulatum DSM 20438] Length = 218 Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 59/219 (26%), Positives = 100/219 (45%), Gaps = 34/219 (15%) Query: 189 IFVFSFVLGIVLSLFAT--RLSR--------HFHEKTGKALPLLYISTFLIFGLPTLVLI 238 I VF VL IV+ L ++R + + + PLL FL FGLP L ++ Sbjct: 24 ISVFGIVLSIVVGLICASIEIARIPVLKQIVRVYIELSRNTPLLVQLYFLYFGLPKLGVV 83 Query: 239 ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQME 298 Q ++G F+GGS ++AE +R GL +P Q E Sbjct: 84 WSAEQC----AIVG-LGFLGGS-------------------YMAEAMRGGLETIPTVQRE 119 Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN 358 +A LGL+ + V++PQA+ + IP + + + L+K SS+ A+ AD++ + +I Sbjct: 120 SAYVLGLSQWQTLSRVVIPQAISTSIPGIVANVIFLIKESSVVSAIALADVMYMAKDLIG 179 Query: 359 QTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 E +L+ + YL + + I+LF L + + + Sbjct: 180 MYYNTYESLLMLVVAYLVILLPISLFGTWLERRFDYERR 218 >gi|222080930|ref|YP_002540293.1| octopine ABC transporter [Agrobacterium radiobacter K84] gi|221725609|gb|ACM28698.1| octopine ABC transporter [Agrobacterium radiobacter K84] Length = 224 Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 53/195 (27%), Positives = 102/195 (52%), Gaps = 18/195 (9%) Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF--GLPTLVLIALKYQLH 245 ++ V +F G+V+ FA ++R+ + G L L + +++F P LV I Y + Sbjct: 26 ELSVLAFAGGMVIG-FALAIARN---EGGPILSRL-VRAYVVFFTNTPQLVQI---YVIF 77 Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305 F P LG V F ++ I ++ A++ EI+R+GL +V + +++AA LG+ Sbjct: 78 FGLPDLG--------VVFSPFAAVLIGMTLNAGAYLTEILRAGLASVHQEELDAAETLGM 129 Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365 + ++ R V++P R +PPL++QY+ + +S+A G +L + + T ++IE Sbjct: 130 SRLQSLRYVIVPHVFRVAMPPLSNQYILMTLGTSMAAVFGVEELTGRAFNVNSTTFRSIE 189 Query: 366 IILIWMFIYLSLSIM 380 I +Y+ ++ M Sbjct: 190 IFTTIAGLYVVITFM 204 >gi|218507511|ref|ZP_03505389.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium etli Brasil 5] Length = 219 Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 42/137 (30%), Positives = 70/137 (51%), Gaps = 24/137 (17%) Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTA------- 278 T ++ GLP L++I + Y GG+ Y+ ++ + A Sbjct: 52 TTIVRGLPELLVILVVY--------------FGGTAAITALTGRYVEINAFAAGVAALMI 97 Query: 279 ---AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335 A+ AEI R +++VPRGQ+EAA +LGL + V+LPQ MR +P + +++L+ Sbjct: 98 VFGAYCAEIFRGAIMSVPRGQVEAARSLGLKPWQTWLFVILPQMMRVALPAYGNLWVSLV 157 Query: 336 KNSSLAVAVGFADLVSV 352 K++SL VG D++ V Sbjct: 158 KDTSLVSVVGLTDIMRV 174 >gi|295675885|ref|YP_003604409.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. CCGE1002] gi|295435728|gb|ADG14898.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. CCGE1002] Length = 229 Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 56/189 (29%), Positives = 92/189 (48%), Gaps = 16/189 (8%) Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLF--ATRLSRHFHEKTGKALPLLYIST 226 MFL G + T T K+ VFS L VL L A +LS++ + + +Y T Sbjct: 1 MFLQGYGPLLLSGTWQT-VKLAVFSLALAFVLGLLGAAAKLSKN---RLSNGVGTVY--T 54 Query: 227 FLIFGLPTLVLIALKY---QLHFDKPVLGQFNFIGGSTVSPE-FMSLYIALSCYTAAFIA 282 L+ G+P LVL+ L + Q+ + + +G + + F++ L A+ Sbjct: 55 TLVRGVPDLVLMLLLFYSIQIWLNNLT----DAMGWDQIDIDPFVAGVAVLGFIYGAYFT 110 Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342 E R +AVPRGQ+EA A G+T + V+ PQ MR +P + + + ++K ++L Sbjct: 111 ETFRGAFLAVPRGQLEAGAAYGMTSWQVFSRVMFPQMMRFALPGIGNNWQVMVKATALVS 170 Query: 343 AVGFADLVS 351 +G AD+V Sbjct: 171 IIGLADVVK 179 >gi|260769233|ref|ZP_05878166.1| arginine ABC transporter permease protein ArtM [Vibrio furnissii CIP 102972] gi|260614571|gb|EEX39757.1| arginine ABC transporter permease protein ArtM [Vibrio furnissii CIP 102972] Length = 222 Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 52/169 (30%), Positives = 87/169 (51%), Gaps = 13/169 (7%) Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV-----SPEFMSLYIALSCYTAAFIA 282 L G P LV I L Y P GQF +I S + P F ++ +AL+ TAA+ + Sbjct: 55 LFTGTPLLVQIFLVYY----GP--GQFEWIRESVLWVWLSKPWFCAM-VALALNTAAYSS 107 Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342 ++ + A+P GQ +A ALG+ ++ AT VLLP A+R +P +++ + + K +SLA Sbjct: 108 QLFKGAFNAIPDGQWQACRALGM-NKIATLRVLLPYALRRAVPAYSNEVILVFKGTSLAS 166 Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 + DL+ I QT + + + YLS++ ++ L ++ K Sbjct: 167 TITIMDLMGYAQRINAQTYDTLTVFGVAGLFYLSVNGLLTLVFRQIERK 215 >gi|239947119|ref|ZP_04698872.1| glutamine ABC transporter, permease/substrate-binding protein [Rickettsia endosymbiont of Ixodes scapularis] gi|239921395|gb|EER21419.1| glutamine ABC transporter, permease/substrate-binding protein [Rickettsia endosymbiont of Ixodes scapularis] Length = 218 Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 44/166 (26%), Positives = 87/166 (52%), Gaps = 29/166 (17%) Query: 191 VFSFVLGIVLSLF------ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244 +F V+G++L++ A R +F+ + PLL + + F P ++++ K+ + Sbjct: 31 IFGLVIGMLLAICKVNKNRALRFFANFYTSIFRGTPLLIQLSIIYFASPYIIVV--KFSV 88 Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304 F G+ I+ S + A+++E++R+G+ AV +GQ EAA AL Sbjct: 89 -----------FTAGA----------ISFSLNSGAYVSEVIRAGINAVDKGQFEAAEALA 127 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 + + ++LPQA+++I P L ++ +NL+K S++ +G DL+ Sbjct: 128 IPKFLIMKDIILPQAVKNIFPSLVNELVNLIKESAIISMLGEMDLM 173 >gi|253689673|ref|YP_003018863.1| polar amino acid ABC transporter, inner membrane subunit [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251756251|gb|ACT14327.1| polar amino acid ABC transporter, inner membrane subunit [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 218 Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 37/108 (34%), Positives = 61/108 (56%), Gaps = 1/108 (0%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G VSP + + +AL+ +T+AF+ +I + A+P+GQ EA+ LGL + V+ PQ Sbjct: 80 GIDVSP-WTAAALALTLFTSAFLVDIWCGSVEALPKGQWEASRCLGLDFGQTLYRVIAPQ 138 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 AMR I P + ++K ++LA +GF +L G + N T Q ++ Sbjct: 139 AMRIAIAPTVGFSVQVIKGTALASIIGFVELTKAGTMLNNVTYQPFKV 186 >gi|241766695|ref|ZP_04764536.1| polar amino acid ABC transporter, inner membrane subunit [Acidovorax delafieldii 2AN] gi|241362978|gb|EER58663.1| polar amino acid ABC transporter, inner membrane subunit [Acidovorax delafieldii 2AN] Length = 216 Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 35/102 (34%), Positives = 57/102 (55%), Gaps = 1/102 (0%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G SP ++ + L Y++A++ EI R + AVPRGQ EA+ +L + + R V+LPQ Sbjct: 80 GVDTSP-LLAASVCLILYSSAYLCEIWRGCVEAVPRGQWEASASLAMGFTEQLRHVILPQ 138 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 A+R I P + ++K ++L +GF ++ G I N T Sbjct: 139 ALRMGIAPTAGFSVQIIKGTALTSVIGFIEITKAGQLIANAT 180 >gi|16264003|ref|NP_436795.1| putative amino acid ABC transporter permease protein [Sinorhizobium meliloti 1021] gi|307300144|ref|ZP_07579929.1| polar amino acid ABC transporter, inner membrane subunit [Sinorhizobium meliloti BL225C] gi|307316503|ref|ZP_07595946.1| polar amino acid ABC transporter, inner membrane subunit [Sinorhizobium meliloti AK83] gi|15140127|emb|CAC48655.1| putative amino acid ABC transporter permease protein [Sinorhizobium meliloti 1021] gi|306897701|gb|EFN28444.1| polar amino acid ABC transporter, inner membrane subunit [Sinorhizobium meliloti AK83] gi|306905033|gb|EFN35616.1| polar amino acid ABC transporter, inner membrane subunit [Sinorhizobium meliloti BL225C] Length = 217 Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 41/126 (32%), Positives = 67/126 (53%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + + LS YTAAF AEIVR G+ +VP AA +LG+T + R ++ P A R +P Sbjct: 87 FTTSGVVLSLYTAAFCAEIVRGGISSVPVTTRRAARSLGMTWWQDMRYIVAPLATRVSLP 146 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 L ++K+S+L + +G +L+ ++ + + + I+LI IY LS +A Sbjct: 147 SWIGLTLGVMKDSALVLWLGLVELLRASQILVTRLQEPLFILLICGAIYFLLSFPVARLG 206 Query: 386 NRLNAK 391 L + Sbjct: 207 GYLEKR 212 >gi|258621394|ref|ZP_05716428.1| amino acid ABC transporter, permease protein [Vibrio mimicus VM573] gi|258586782|gb|EEW11497.1| amino acid ABC transporter, permease protein [Vibrio mimicus VM573] Length = 246 Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 33/92 (35%), Positives = 56/92 (60%), Gaps = 1/92 (1%) Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321 VSP F++ + + A++AE R ++AV +G++EAA A G++ + R +LLPQ +R Sbjct: 112 VSP-FVAGVLTIGFIFGAYMAETFRGAILAVDKGELEAAKAYGMSSSMSFRRILLPQMIR 170 Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353 IP + +L LLK ++L +G D+V +G Sbjct: 171 HAIPGFGNNWLVLLKTTALVSIIGLEDMVRIG 202 >gi|222087816|ref|YP_002546354.1| nopaline ABC transporter [Agrobacterium radiobacter K84] gi|221725264|gb|ACM28420.1| nopaline ABC transporter [Agrobacterium radiobacter K84] Length = 222 Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 42/137 (30%), Positives = 70/137 (51%), Gaps = 24/137 (17%) Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTA------- 278 T ++ GLP L++I + Y GG+ Y+ +S + A Sbjct: 52 TTIVRGLPELLVILVVY--------------FGGTAAITALTGRYVEISAFAAGVAALTV 97 Query: 279 ---AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335 A+ AEI R + ++P+GQ EAA++LGL + LV+LPQ +R +P + +++LL Sbjct: 98 VFGAYCAEIFRGAIQSIPQGQTEAALSLGLASWQVWLLVILPQMIRVALPAFGNLWVSLL 157 Query: 336 KNSSLAVAVGFADLVSV 352 K++SL VG D++ V Sbjct: 158 KDTSLISIVGLTDIMRV 174 >gi|163839275|ref|YP_001623680.1| cystine transport system, permease protein [Renibacterium salmoninarum ATCC 33209] gi|162952751|gb|ABY22266.1| cystine transport system, permease protein [Renibacterium salmoninarum ATCC 33209] Length = 219 Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 39/130 (30%), Positives = 73/130 (56%), Gaps = 4/130 (3%) Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327 S IALS + AE++R+ +++VP+GQ EA +G++ ++ ++LPQA R +PPL Sbjct: 89 SAIIALSLNVGGYAAEVIRAAILSVPKGQWEAGHMIGMSRGQSLFRIILPQAARVSLPPL 148 Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ----AIEIILIWMFIYLSLSIMIAL 383 ++ +++L+K++SLA + +L I + +E L++ I L LS + + Sbjct: 149 SNTFISLIKDTSLASLILVTELFKESQKIAAVSRDFMVLYLEAALVYWVICLVLSTIQSQ 208 Query: 384 FMNRLNAKIA 393 RL+ +A Sbjct: 209 LAKRLDRYVA 218 >gi|72160709|ref|YP_288366.1| amino acid ABC transporter inner membrane subunit [Thermobifida fusca YX] gi|71914441|gb|AAZ54343.1| amino acid ABC transporter, inner membrane subunit [Thermobifida fusca YX] Length = 212 Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 45/149 (30%), Positives = 79/149 (53%), Gaps = 6/149 (4%) Query: 249 PVLGQFNFIGGSTVSPEFMSLYI----ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304 P+L Q F+ +++P +S + L + AA+ AE+ RSG+ AVP GQ EA AL Sbjct: 64 PLLVQLVFV--FSLAPNTLSAFTIGVAVLGVHYAAYTAEVYRSGIEAVPAGQWEACRALS 121 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364 L + V+LPQA+R +IPPL + + + K++ L A+ +L+ I + + Sbjct: 122 LPLHRTWGAVILPQAIRRVIPPLGNYLIAMFKDTPLLFAITVGELMYQASQIGGVYFRYL 181 Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIA 393 E + + +L +S+ A+ + +L + A Sbjct: 182 EAMTLVGLFFLLVSVPSAILIRQLERRYA 210 >gi|294498829|ref|YP_003562529.1| sulfur-containing amino acid ABC transporter permease TcyM [Bacillus megaterium QM B1551] gi|295704151|ref|YP_003597226.1| sulfur-containing amino acid ABC transporter permease TcyM [Bacillus megaterium DSM 319] gi|294348766|gb|ADE69095.1| sulfur-containing amino acid ABC transporter, permease protein TcyM [Bacillus megaterium QM B1551] gi|294801810|gb|ADF38876.1| sulfur-containing amino acid ABC transporter, permease protein TcyM [Bacillus megaterium DSM 319] Length = 236 Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 36/111 (32%), Positives = 64/111 (57%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IALS A+++EI+RSGL+AV +GQ+EAA A+G+ ++ + ++ PQA +P L + Sbjct: 106 IALSFTAGAYMSEIIRSGLLAVEKGQIEAAYAIGMNRFQSMKRIVFPQAFALSLPNLCNI 165 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 ++ L SS+A V +L + + + +E + IY L+++I Sbjct: 166 FIGFLHTSSIAFIVSQKELNGAANIVASNNLKFLEAYIAAALIYWMLTMLI 216 >gi|266619128|ref|ZP_06112063.1| L-cystine ABC transporter, permease protein [Clostridium hathewayi DSM 13479] gi|288869357|gb|EFD01656.1| L-cystine ABC transporter, permease protein [Clostridium hathewayi DSM 13479] Length = 225 Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 55/210 (26%), Positives = 107/210 (50%), Gaps = 18/210 (8%) Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252 SF LG++L+ F T + R K Y+ ++I G P +V + + + + P +G Sbjct: 30 SFALGMILA-FITAMCRISKNKLLSKTAQFYV--WVIRGTPMIVQL---FVIFYGLPKVG 83 Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312 SP +S I L+ A+ +EI+R+ L ++P+GQ EA ALG++ + Sbjct: 84 IM-------FSP-IVSAIIGLTISEGAYDSEIIRAALTSIPKGQWEACHALGMSKFQTLS 135 Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA----IEIIL 368 V++PQA +P L + +++L+K++SL + ++ +G I+ T + +E+ L Sbjct: 136 NVIIPQAALIAVPSLGNMFISLVKDTSLTAILTVREVFQIGQQIVAVTFEPLWIYLEVGL 195 Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 I++ LS + + +L + +K++K Sbjct: 196 IYLIYSTVLSQLQGVLERKLGKHMLVKDEK 225 >gi|149201667|ref|ZP_01878641.1| polar amino acid uptake family ABC transporter, permease protein [Roseovarius sp. TM1035] gi|149144715|gb|EDM32744.1| polar amino acid uptake family ABC transporter, permease protein [Roseovarius sp. TM1035] Length = 247 Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 46/150 (30%), Positives = 78/150 (52%), Gaps = 5/150 (3%) Query: 243 QLHFDKPVLGQFNFIGGSTVSPE-----FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQM 297 QL+F +G I G P+ F I+LS + A EI R+G+ AVPR + Sbjct: 86 QLYFFYFAIGTVLRITGENGLPQPLISNFGWAIISLSLFAGALNVEIFRAGVEAVPRSTV 145 Query: 298 EAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII 357 EAA ALG T + ++LP A+R +P L + +NL+K ++LA A+ +L+ V I Sbjct: 146 EAAEALGYTRLQIYTDIVLPLAVRVSLPALGTNLVNLVKTTTLAYAIAVPELLYVSAQIW 205 Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNR 387 ++ E++ + + Y+ L ++ ++R Sbjct: 206 SEDLNVREMMNVLLVSYVGLVAILVWVLHR 235 >gi|16119459|ref|NP_396165.1| ABC transporter, membrane spanning protein (amino acid) [Agrobacterium tumefaciens str. C58] gi|15161997|gb|AAK90606.1| ABC transporter, membrane spanning protein (amino acid) [Agrobacterium tumefaciens str. C58] Length = 216 Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 52/165 (31%), Positives = 80/165 (48%), Gaps = 10/165 (6%) Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287 LI G+P L L+ Y F PVL G V P +++ A + YTA F+ +I R Sbjct: 58 LIQGIPLLGLLMFFY---FGIPVLA------GKDV-PTVVAVGAAYTIYTAVFLGDIWRG 107 Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347 G+ AV + Q EA LGL+ + ++ PQA R +P + L+KN+SLA VG Sbjct: 108 GIQAVRQAQWEAGACLGLSWLQQFVHIIGPQAFRIALPATVGFLVQLIKNTSLASVVGLV 167 Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 +L G I T Q + + + IY ++ + + L A++ Sbjct: 168 ELARAGQMISAGTFQPLLVYTLVAAIYFTICFPLTTWSRTLEARL 212 >gi|26987023|ref|NP_742448.1| polar amino acid ABC transporter inner membrane subunit [Pseudomonas putida KT2440] gi|24981642|gb|AAN65912.1|AE016219_5 amino acid ABC transporter, permease protein [Pseudomonas putida KT2440] Length = 230 Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 49/188 (26%), Positives = 92/188 (48%), Gaps = 13/188 (6%) Query: 214 KTGKALPLLYISTF---LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP-----E 265 KT PL ++ F L+ G+P L+ + L Y F +G N +G + P Sbjct: 41 KTSPFKPLQWLGGFYSTLVRGVPELLWVLLIY---FG--TVGLMNSLGEALNMPGLELSA 95 Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + IAL A+ E+ R ++A+P+G EA +ALGL+ + ++LPQ R +P Sbjct: 96 FAAGVIALGLCFGAYATEVFRGAILAIPKGHREAGLALGLSKGRILSRIILPQMWRIALP 155 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 L + ++ L+K+++L +G +++ + T + ++ IYL L+++ M Sbjct: 156 GLGNLFMILMKDTALVSVIGLEEIMRHSQIGVTVTKEPFTFYMVAACIYLGLTVLAMTGM 215 Query: 386 NRLNAKIA 393 + + + A Sbjct: 216 HFMEKRAA 223 >gi|170724086|ref|YP_001751774.1| polar amino acid ABC transporter inner membrane subunit [Pseudomonas putida W619] gi|169762089|gb|ACA75405.1| polar amino acid ABC transporter, inner membrane subunit [Pseudomonas putida W619] Length = 231 Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 49/188 (26%), Positives = 92/188 (48%), Gaps = 13/188 (6%) Query: 214 KTGKALPLLYISTF---LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP-----E 265 KT PL ++ F L+ G+P L+ + L Y F +G N +G + P Sbjct: 41 KTSPLKPLQWLGGFYSTLVRGVPELLWVLLIY---FG--TVGLMNSLGEALNMPGLELSA 95 Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + IAL A+ E+ R ++A+P+G EA +ALGL+ + ++LPQ R +P Sbjct: 96 FAAGVIALGLCFGAYATEVFRGAILAIPKGHREAGLALGLSKARILSRIILPQMWRIALP 155 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 L + ++ L+K+++L +G +++ + T + ++ IYL L+++ M Sbjct: 156 GLGNLFMILMKDTALVSVIGLEEIMRHAQIGVTVTKEPFTFYMVAACIYLGLTVVAMTGM 215 Query: 386 NRLNAKIA 393 + + + A Sbjct: 216 HFMEKRAA 223 >gi|227512390|ref|ZP_03942439.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus buchneri ATCC 11577] gi|227084363|gb|EEI19675.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus buchneri ATCC 11577] Length = 190 Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 59/194 (30%), Positives = 93/194 (47%), Gaps = 36/194 (18%) Query: 193 SFVLGIVLSLFAT--RLSR----HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246 SF+ ++L LF T ++SR H+ + +IS + G+P LVL+ + Y Sbjct: 9 SFIGALILGLFLTLAQMSRFKLLHWSARA-------FIS--FMRGVPMLVLLFIIY---- 55 Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306 F F G+ P + IA + +AF++E+ RS AV RGQ EAA +LGL Sbjct: 56 -------FGF--GANALP---AAVIAFTINCSAFVSEVFRSSFSAVDRGQWEAAYSLGLP 103 Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 +R V+ PQA + IP L + L+L K++SLA + +++ I + I Sbjct: 104 YRTVIAKVIFPQAFKIAIPALGNILLDLFKSTSLAAMITVSEMFMDAKIIAGAYQDYMSI 163 Query: 367 -----ILIWMFIYL 375 I+ W F +L Sbjct: 164 YIVMAIIYWFFCWL 177 >gi|126739644|ref|ZP_01755336.1| ABC transporter, membrane spanning protein (amino acid) [Roseobacter sp. SK209-2-6] gi|126719290|gb|EBA16000.1| ABC transporter, membrane spanning protein (amino acid) [Roseobacter sp. SK209-2-6] Length = 221 Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 44/142 (30%), Positives = 75/142 (52%), Gaps = 3/142 (2%) Query: 254 FNF--IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311 +NF I G + P F S + L+ YTAA +A + R G+ AV + AA +LG+++ + Sbjct: 79 YNFAPILGLNLDP-FASGVVILAIYTAALVANVARGGIEAVGQPMRRAARSLGMSYWQDL 137 Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371 R V LP R++ P L ++K+S+L +G+ +L+ +I +T + I+ I Sbjct: 138 RYVALPIGGRAVFPAWVGVALGVMKDSALVSVLGYVELLKASQILITRTQEPFLILSIAG 197 Query: 372 FIYLSLSIMIALFMNRLNAKIA 393 Y +LS I+ + RL + A Sbjct: 198 AFYFALSYPISRYAARLEQRWA 219 >gi|320547239|ref|ZP_08041532.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus equinus ATCC 9812] gi|320448127|gb|EFW88877.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus equinus ATCC 9812] Length = 215 Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 28/73 (38%), Positives = 49/73 (67%) Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 A + +T+A +AEI+R GL V GQ EA ++ G+TH + ++ PQA R ++P + SQ+ Sbjct: 86 AFTVFTSAALAEIIRGGLNGVDHGQTEAGLSQGMTHFQIFIYIVFPQAFRKMLPAIISQF 145 Query: 332 LNLLKNSSLAVAV 344 + ++K++SL +V Sbjct: 146 VTVIKDTSLLYSV 158 Score = 40.4 bits (93), Expect = 0.45, Method: Compositional matrix adjust. Identities = 21/61 (34%), Positives = 37/61 (60%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 IL G T +++F ++ +TIIGT++ R N ++ I +Y+E RN+P L+ IF + Sbjct: 12 ILQGLWLTLYISFISIVLSTIIGTILAVMRNGKNPVLRLISSIYIEFVRNVPNLLWIFII 71 Query: 149 Y 149 + Sbjct: 72 F 72 >gi|170693092|ref|ZP_02884253.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD [Burkholderia graminis C4D1M] gi|170142090|gb|EDT10257.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD [Burkholderia graminis C4D1M] Length = 219 Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 46/148 (31%), Positives = 78/148 (52%), Gaps = 8/148 (5%) Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301 Y L + PV G I S ++ + + + +CYT+ E+ R+GL V RGQ EAA Sbjct: 74 YVLFYVLPVYG----ITMSALTAGTVGIALHYACYTS----EVYRAGLNGVARGQWEAAC 125 Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361 AL L+ + V+LPQA+R +IP L + + + K++ + A+ +L+ I ++T Sbjct: 126 ALSLSPWRTYSGVILPQAIRPVIPALGNYLVAMFKDTPVLSAITVVELMQQAKNIGSETF 185 Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLN 389 + +E I + +L +SI A + RL Sbjct: 186 RYLEPITLAGIFFLLISITFAQLVRRLE 213 >gi|170738480|ref|YP_001767135.1| polar amino acid ABC transporter inner membrane subunit [Methylobacterium sp. 4-46] gi|168192754|gb|ACA14701.1| polar amino acid ABC transporter, inner membrane subunit [Methylobacterium sp. 4-46] Length = 248 Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 44/117 (37%), Positives = 70/117 (59%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 ++LS + AAF EI RSG+ AVPR +EAA ALG T KA V+LP A+R +P L + Sbjct: 120 VSLSLFAAAFNVEIFRSGIEAVPRTTVEAAEALGYTRAKAYLHVVLPLALRICLPALNNN 179 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387 +NLLK ++LA A+ + + I +++ +E++L+ + Y L ++ M+R Sbjct: 180 LINLLKTTTLAYAIAVPETLYAVKQIWSESQNVLEMMLVLLATYGILVGILVWLMHR 236 >gi|171778292|ref|ZP_02919498.1| hypothetical protein STRINF_00340 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] gi|171282992|gb|EDT48416.1| hypothetical protein STRINF_00340 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] Length = 218 Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 31/102 (30%), Positives = 58/102 (56%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I S + A + ++VR L ++P+ Q+E+ +ALGL +R+ V++PQ +R ++P + Sbjct: 90 IVFSMWGTAEMGDLVRGALTSLPKHQIESGLALGLNNRQLFIYVVMPQILRQLLPQAVNL 149 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372 ++K +SL V +G ++V VG II + IW++ Sbjct: 150 MTRMIKTTSLIVLIGVVEVVKVGQEIIEANRLTVPSTAIWIY 191 >gi|59712193|ref|YP_204969.1| histidine/lysine/arginine/ornithine transporter subunit [Vibrio fischeri ES114] gi|59480294|gb|AAW86081.1| histidine/lysine/arginine/ornithine transporter subunit [Vibrio fischeri ES114] Length = 246 Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 48/159 (30%), Positives = 81/159 (50%), Gaps = 22/159 (13%) Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKY---QLHFDKPVLGQFNFIG----GSTVSPEF 266 + +++ LY T ++ G+P LVL+ L + Q+ + + +I S E+ Sbjct: 45 RWARSIATLY--TTIVRGIPDLVLMMLLFFGGQMLLNNGLYASNEWINEWMTNSNPDHEW 102 Query: 267 MSL---YIALSCYTA----------AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313 +S YI +S + A A++AE R ++AV RG+MEAA A G++ A R Sbjct: 103 ISYLPDYIEISPFIAGVLTIGFIFGAYMAETFRGAIMAVDRGEMEAAKAYGMSGMMAFRR 162 Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352 +L PQ +R +P + +L LLK ++L +G D+V V Sbjct: 163 ILFPQMIRHALPGFGNNWLVLLKTTALVSIIGLEDMVRV 201 >gi|46578803|ref|YP_009611.1| His/Glu/Gln/Arg/opine ABC transporter permease [Desulfovibrio vulgaris str. Hildenborough] gi|120603590|ref|YP_967990.1| polar amino acid ABC transporter inner membrane protein [Desulfovibrio vulgaris DP4] gi|46448215|gb|AAS94870.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Desulfovibrio vulgaris str. Hildenborough] gi|120563819|gb|ABM29563.1| amino acid ABC transporter membrane protein 1, PAAT family [Desulfovibrio vulgaris DP4] gi|311232666|gb|ADP85520.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio vulgaris RCH1] Length = 225 Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 32/86 (37%), Positives = 59/86 (68%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + + L +AA+ ++I R ++A+P+GQ++AA ALG++ A R ++LPQA+R IP Sbjct: 89 FTASCLVLGMASAAYQSQIFRGSILALPQGQLKAARALGMSDGAAIRSIVLPQALRLSIP 148 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVS 351 +++Y LLK+S+LA +G ++++ Sbjct: 149 AWSNEYSILLKDSALAFVLGTPEIMA 174 >gi|307693895|ref|ZP_07636132.1| putative ABC-type polar amino acid transport system, permease protein [Ruminococcaceae bacterium D16] Length = 250 Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 38/138 (27%), Positives = 74/138 (53%), Gaps = 7/138 (5%) Query: 260 STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319 S S +++ +A A + +EI R G+ VP+GQ EA LG+T + R + L Q Sbjct: 111 SGESGRMLAVCVAFIINYACYFSEIYRGGIQGVPKGQQEAGQVLGMTKLQIFRHITLLQM 170 Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI-----Y 374 ++ I+PP++++ + L+K++SLA + +++ +G + + G + L+W Y Sbjct: 171 IKRIVPPMSNEIITLVKDTSLARVIALQEVIWMGESFMK--GNSGIAGLVWPLFFTAVYY 228 Query: 375 LSLSIMIALFMNRLNAKI 392 L S ++ L + +L K+ Sbjct: 229 LIFSGVVTLLLGQLEKKM 246 >gi|262173970|ref|ZP_06041647.1| arginine ABC transporter permease protein ArtQ [Vibrio mimicus MB-451] gi|261891328|gb|EEY37315.1| arginine ABC transporter permease protein ArtQ [Vibrio mimicus MB-451] Length = 229 Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 38/89 (42%), Positives = 58/89 (65%), Gaps = 1/89 (1%) Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321 +SP F++ IALS A++ ++ +R L AV RGQ EAA ALG+ A ++LPQA+R Sbjct: 87 ISP-FIAGVIALSLIFASYASQTLRGALKAVGRGQREAASALGIPPAHAFFRIVLPQAVR 145 Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 +P L +Q+L LLK+++L +G DL+ Sbjct: 146 HALPGLMNQWLVLLKDTALVSLIGVTDLL 174 >gi|227329358|ref|ZP_03833382.1| putative amino acid ABC transporter, permease protein [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 218 Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 45/136 (33%), Positives = 72/136 (52%), Gaps = 7/136 (5%) Query: 237 LIALKYQLHFDKPVLGQF--NFIG----GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290 L+ L +L P+L Q F G G VSP + + +AL+ +T+AF+ +I + Sbjct: 52 LVHLYSELFQGTPLLMQLFLAFFGLALFGIDVSP-WTAAALALTLFTSAFLVDIWCGSVE 110 Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 A+P+GQ EA+ LGL + V+ PQAMR I P + ++K ++LA +GF +L Sbjct: 111 ALPKGQWEASRCLGLDFGQTLYRVIAPQAMRIAIAPTVGFSVQVIKGTALASIIGFIELT 170 Query: 351 SVGGTIINQTGQAIEI 366 G + N T Q ++ Sbjct: 171 KAGTMLNNVTYQPFKV 186 >gi|27365436|ref|NP_760964.1| Arginine/ornithine ABC transporter permease AotQ [Vibrio vulnificus CMCP6] gi|37680521|ref|NP_935130.1| ABC-type arginine transport system, permease component [Vibrio vulnificus YJ016] gi|320155822|ref|YP_004188201.1| arginine/ornithine ABC transporterpermease AotQ [Vibrio vulnificus MO6-24/O] gi|27361584|gb|AAO10491.1| Arginine/ornithine ABC transporter, permease protein AotQ [Vibrio vulnificus CMCP6] gi|37199269|dbj|BAC95101.1| ABC-type arginine transport system, permease component [Vibrio vulnificus YJ016] gi|319931134|gb|ADV85998.1| arginine/ornithine ABC transporter, permease protein AotQ [Vibrio vulnificus MO6-24/O] Length = 246 Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 35/99 (35%), Positives = 57/99 (57%), Gaps = 1/99 (1%) Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321 VSP F++ + + A++AE R ++AV +G++EAA A G++ A R +LLPQ +R Sbjct: 112 VSP-FIAGVLTIGFIFGAYMAETFRGAIMAVDKGELEAAKAYGMSSALAFRRILLPQMIR 170 Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 +P + +L LLK ++L +G D+V VG T Sbjct: 171 HALPGFGNNWLVLLKTTALVSIIGLEDMVRVGALAAGST 209 >gi|186473942|ref|YP_001861284.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia phymatum STM815] gi|184196274|gb|ACC74238.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia phymatum STM815] Length = 543 Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 33/70 (47%), Positives = 49/70 (70%) Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339 FIAEI+R+G++ V RGQ+ A ALG+T R V+ PQA+R+I+P L ++ ++ LKNSS Sbjct: 100 FIAEILRAGVLGVERGQLLAGQALGMTPSVLMRRVIAPQAIRAIVPALGNESVSALKNSS 159 Query: 340 LAVAVGFADL 349 LA + +L Sbjct: 160 LASVIAVDEL 169 >gi|2668596|gb|AAC71071.1| membrane protein [Pseudomonas aeruginosa PAO1] Length = 229 Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 41/125 (32%), Positives = 69/125 (55%), Gaps = 9/125 (7%) Query: 231 GLPTLVLIALKYQ-----LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285 G+P LVLI L + L++ P LG ++I ++P F+S L A+++E Sbjct: 58 GIPDLVLILLIFYGGQGLLNWVAPQLGYDDYI---DLNP-FVSGVGTLGFIFGAYLSETF 113 Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345 R +A+P+GQ EA G++HR+ + +PQ +R IP T+ +L L+K ++L VG Sbjct: 114 RGAFMAIPKGQGEAGYGYGMSHRQVFFRIQVPQMIRLAIPGFTNNWLVLVKATALISVVG 173 Query: 346 FADLV 350 D++ Sbjct: 174 LQDMM 178 >gi|49475424|ref|YP_033465.1| ABC transporter, permease protein [Bartonella henselae str. Houston-1] gi|49238230|emb|CAF27440.1| ABC transporter, permease protein [Bartonella henselae str. Houston-1] Length = 239 Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 55/187 (29%), Positives = 90/187 (48%), Gaps = 5/187 (2%) Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQ--LHFDKPVLGQFNFIGGSTVSPEFMSLYI 271 KT KA+ L+ S F LP L+ + L Y + VL FN +++ F++ + Sbjct: 53 KTAKAIATLFSSVFR--SLPELLTLFLVYYGLQSVIQAVLDYFNIEIIFSINA-FIAGVL 109 Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 ALS AAF E+ +GQ EAA ALGL+ V+ PQ +R+ +P L++ + Sbjct: 110 ALSMVLAAFSCEVWLGAFNIFDKGQYEAAKALGLSRSTTFFRVVFPQLIRNALPGLSNNW 169 Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 L LLK++SL + DL+ + T + + L+ +YL S + ++ L + Sbjct: 170 LTLLKDTSLVSTISLVDLMQQTNLAVAATNEPMLFYLVACLLYLLFSAFFSAILHYLETR 229 Query: 392 IALKEKK 398 L +K Sbjct: 230 TQLGYQK 236 >gi|317404139|gb|EFV84587.1| polar amino acid ABC transporter [Achromobacter xylosoxidans C54] Length = 227 Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 50/164 (30%), Positives = 81/164 (49%), Gaps = 24/164 (14%) Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279 PLL + FLIFGL + G T+ P +AL A Sbjct: 68 PLLIQAYFLIFGLSS-----------------------AGLTM-PIMAGAVLALVINIGA 103 Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339 + EIVR+G+ ++P+ Q+EA L L+ + V+L A+ + P LTSQ++ L+ SS Sbjct: 104 YTCEIVRAGIESIPKDQLEAGECLALSRLQVFWHVVLRPAVERVYPSLTSQFVLLMLASS 163 Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 + AVG +L+ V I + T + E+ ++ +YL+LS ++ L Sbjct: 164 IMSAVGAEELLGVANRIQSDTYRNFEVFIVLWGVYLALSWLMRL 207 >gi|292487796|ref|YP_003530671.1| arginine ABC transporter inner membrane protein [Erwinia amylovora CFBP1430] gi|292899026|ref|YP_003538395.1| arginine ABC transporter permease [Erwinia amylovora ATCC 49946] gi|291198874|emb|CBJ45984.1| arginine ABC transporter, permease protein [Erwinia amylovora ATCC 49946] gi|291553218|emb|CBA20263.1| Arginine ABC transport system, inner membrane component [Erwinia amylovora CFBP1430] Length = 238 Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 56/187 (29%), Positives = 94/187 (50%), Gaps = 14/187 (7%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDK-----PVLGQFNFIGGSTVSPEFMSLYI 271 +ALP + + F+ FG L LI+L D PV Q N I VSP F+ I Sbjct: 55 RALPEILVVLFIYFGASQL-LISLSDGFTLDLAFVQIPV--QIN-IENFDVSP-FLCGVI 109 Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 AL+ A++ ++ +R L AVP GQ E+ ALG+ +++PQ R +P L +Q+ Sbjct: 110 ALAILYASYASQTLRGALQAVPLGQWESGQALGMKKSAIFLRLIVPQMWRHALPGLGNQW 169 Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 L LLK+++L + D++ +I +T + W I ++ ++I LF ++ + Sbjct: 170 LVLLKDTALVSLISVNDIMLQTKSIATRTQEP----FTWYMIAAAIYLVITLFSQQVLKR 225 Query: 392 IALKEKK 398 I L+ + Sbjct: 226 IELRATR 232 >gi|254255035|ref|ZP_04948352.1| ABC-type arginine transport system permease component [Burkholderia dolosa AUO158] gi|124899680|gb|EAY71523.1| ABC-type arginine transport system permease component [Burkholderia dolosa AUO158] Length = 293 Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 57/215 (26%), Positives = 101/215 (46%), Gaps = 11/215 (5%) Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY---QL 244 K+ V S +VL L A ++ + K+L Y T LI +P LVL+ L + Q+ Sbjct: 83 KLAVLSLAASLVLGL-AGAAAKLSTSRMLKSLGTFY--TTLIRAVPDLVLMLLLFYGIQI 139 Query: 245 HFDKPVLGQFNFIGGSTVSPE-FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 + + +G + + F + + L A+ E R +AVPRGQ+EA A Sbjct: 140 LLNDAT----DLLGREQIDIDPFAAGVVTLGFIYGAYFTETFRGAFLAVPRGQLEAGFAY 195 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363 G++ + R +L PQ MR +P + + + L+K ++L +G AD+V T Sbjct: 196 GMSGWRVFRRILFPQMMRFALPGIGNNWQVLVKATALVSIIGLADVVKASQDAGKSTLDF 255 Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 L IYL+++ M + + RL+ + ++ ++ Sbjct: 256 FFFTLAAGAIYLAITTMSNVVLYRLDKRYSIGVRR 290 >gi|242280778|ref|YP_002992907.1| polar amino acid ABC transporter inner membrane subunit [Desulfovibrio salexigens DSM 2638] gi|242123672|gb|ACS81368.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio salexigens DSM 2638] Length = 218 Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 35/105 (33%), Positives = 62/105 (59%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +AL + A+IAEI R + ++ GQMEAA ++G+++ +A ++LPQA + IP L +Q Sbjct: 92 LALGIHNGAYIAEIFRGAIASISPGQMEAARSIGMSYPRAMVRIVLPQAFKRAIPSLGNQ 151 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375 ++ LK+SSLA + +L+ + + +E++ I YL Sbjct: 152 FIIALKDSSLASTITINELLLKSQQLASSNFMMMEMLTIAGVFYL 196 >gi|312171915|emb|CBX80172.1| Arginine ABC transport system, inner membrane component [Erwinia amylovora ATCC BAA-2158] Length = 238 Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 56/187 (29%), Positives = 94/187 (50%), Gaps = 14/187 (7%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDK-----PVLGQFNFIGGSTVSPEFMSLYI 271 +ALP + + F+ FG L LI+L D PV Q N I VSP F+ I Sbjct: 55 RALPEILVVLFIYFGASQL-LISLSDGFTLDLAFVQIPV--QIN-IENFDVSP-FLCGVI 109 Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 AL+ A++ ++ +R L AVP GQ E+ ALG+ +++PQ R +P L +Q+ Sbjct: 110 ALAILYASYASQTLRGALQAVPLGQWESGQALGMKKSAIFLRLIVPQMWRHALPGLGNQW 169 Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 L LLK+++L + D++ +I +T + W I ++ ++I LF ++ + Sbjct: 170 LVLLKDTALVSLISVNDIMLQTKSIATRTQEP----FTWYMIAAAIYLVITLFSQQVLKR 225 Query: 392 IALKEKK 398 I L+ + Sbjct: 226 IELRATR 232 >gi|293193555|ref|ZP_06609825.1| amino acid ABC transporter, permease protein [Actinomyces odontolyticus F0309] gi|292819911|gb|EFF78913.1| amino acid ABC transporter, permease protein [Actinomyces odontolyticus F0309] Length = 219 Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 51/170 (30%), Positives = 87/170 (51%), Gaps = 8/170 (4%) Query: 230 FGLPTLVLIALKY-QLHFDKPVLGQFNFI------GGSTVSPEFMSLYIALSCYTAAFIA 282 + +P IA Y +L + P+L Q FI G S E ++ I L A++A Sbjct: 44 YRIPVAAQIAAAYVELSRNTPLLVQLFFIYFGLPRVGIKWSGETCAI-IGLIFLGGAYMA 102 Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342 E +RSGL ++ Q E++ ALGLT + R V LPQA+ + +PPL + + L+K +S+ Sbjct: 103 EALRSGLDSIATIQWESSAALGLTRTQTLRHVALPQAIATSVPPLAANVIFLIKETSVVS 162 Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 V DLV V +I + E +++ + YL + + +++ + K+ Sbjct: 163 VVALPDLVYVAKDLIGMSYNTSEALILLVIAYLVILLPVSIAARLIEKKV 212 >gi|209544821|ref|YP_002277050.1| polar amino acid ABC transporter inner membrane subunit [Gluconacetobacter diazotrophicus PAl 5] gi|209532498|gb|ACI52435.1| polar amino acid ABC transporter, inner membrane subunit [Gluconacetobacter diazotrophicus PAl 5] Length = 517 Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 36/93 (38%), Positives = 59/93 (63%), Gaps = 2/93 (2%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F++ +I+LS AA+ EI R+ L A+ GQ A ALG+T + R V+ PQA+R +P Sbjct: 380 FLAAWISLSINEAAYQVEINRAALQAIDPGQALAGDALGMTRMQVYRHVIFPQALRIALP 439 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN 358 P +++++L+K +SLA + +L++V T IN Sbjct: 440 PTINEFISLIKTTSLASVISLQELLAV--TQIN 470 >gi|158424304|ref|YP_001525596.1| amino acid ABC transporter permease protein [Azorhizobium caulinodans ORS 571] gi|158331193|dbj|BAF88678.1| amino acid ABC transporter permease protein [Azorhizobium caulinodans ORS 571] Length = 231 Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 38/135 (28%), Positives = 70/135 (51%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P F+ ++++ AF+ EI+R G +V R Q EAA + + RLV+LPQA R + Sbjct: 95 PLFVVAAVSVTMIAGAFLGEIIRGGFNSVHRNQWEAAETMNFSLIDTIRLVVLPQAWRIV 154 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 +PP ++ +K+++LA +G +L VG + N+ A + + +Y +S ++ Sbjct: 155 LPPAFGFFVMFIKDTALASQIGVIELTYVGKVLNNKGFSAALSFGVILIVYFLISYPLSR 214 Query: 384 FMNRLNAKIALKEKK 398 L A++A + Sbjct: 215 LGAHLEARLASSRHR 229 >gi|312132395|ref|YP_003999734.1| hism3 [Bifidobacterium longum subsp. longum BBMN68] gi|311772678|gb|ADQ02166.1| HisM3 [Bifidobacterium longum subsp. longum BBMN68] Length = 219 Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 53/194 (27%), Positives = 89/194 (45%), Gaps = 25/194 (12%) Query: 204 ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVS 263 A ++ R + E + + PLL FL FGLP L ++ + + F+GGS Sbjct: 51 ARQIVRIYIELS-RNTPLLVQLYFLYFGLPKLGVV-----WSAETCAIVGLGFLGGS--- 101 Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 ++AE +R GL AVP Q E A LGLT + V+LPQA+ + Sbjct: 102 ----------------YMAEAMRGGLEAVPNVQRETAYVLGLTSTQIITRVILPQAVSTA 145 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 IP + + + L K SS+ A+ AD++ + +I E + + + YL + + I++ Sbjct: 146 IPGVVANVIFLFKESSVVSAIALADVMYMAKDLIGMYYSTYESLFVLVVAYLVILLPISI 205 Query: 384 FMNRLNAKIALKEK 397 F L + + + Sbjct: 206 FGTWLERRFDYERR 219 >gi|149202380|ref|ZP_01879353.1| polar amino acid uptake family ABC transporter, permease protein [Roseovarius sp. TM1035] gi|149144478|gb|EDM32509.1| polar amino acid uptake family ABC transporter, permease protein [Roseovarius sp. TM1035] Length = 275 Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 46/174 (26%), Positives = 87/174 (50%), Gaps = 6/174 (3%) Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY----IALSCYTAAFIAE 283 +I G P L+ I L Y + + Q+ +I GS + P + +AL+ A + E Sbjct: 102 IIRGTPLLLQIWLLY--YGLGSLFPQYPWIRGSELWPYLRQAWPYAVLALTLSYAGYEGE 159 Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343 ++R G +V +GQ+EAA A G+ R + LPQA+R+++P L + + LK + L Sbjct: 160 VMRGGFASVQKGQLEAARAFGMPRFTIFRRIWLPQAIRNVLPTLGGETILQLKATPLVAT 219 Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 + ++ SV + T E +L+ +Y+ ++ +IAL + ++ + + Sbjct: 220 ITVIEIYSVSSRVRADTFIVYEPLLLLALVYMIIAGLIALMFRWIENRVPSRPR 273 >gi|107024071|ref|YP_622398.1| amino acid ABC transporter permease [Burkholderia cenocepacia AU 1054] gi|105894260|gb|ABF77425.1| amino acid ABC transporter membrane protein, PAAT family [Burkholderia cenocepacia AU 1054] Length = 226 Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 46/149 (30%), Positives = 82/149 (55%), Gaps = 14/149 (9%) Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252 SF +G++L+ F L+R F + +A+ YI +L G P LV + + + + P +G Sbjct: 30 SFAIGLLLA-FGAALTRLFGPRWAQAVVRFYI--WLFRGSPLLVQL---FVIFYGLPNVG 83 Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312 V + I S A+ AE++R + ++P+GQ EAA ++ +T +A R Sbjct: 84 --------IVLDPLTAAVIGFSLNVGAYNAEVIRGVIESMPKGQWEAAYSMSMTRAQALR 135 Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341 +LPQA R +P L++ +++L+K++SLA Sbjct: 136 RAILPQAARVALPALSNSFISLVKDTSLA 164 >gi|270293189|ref|ZP_06199400.1| amino acid ABC transporter, permease protein [Streptococcus sp. M143] gi|270279168|gb|EFA25014.1| amino acid ABC transporter, permease protein [Streptococcus sp. M143] Length = 219 Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 29/73 (39%), Positives = 51/73 (69%) Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 A + +T+A +AEI+R GL AV +GQ EA ++ G T + ++LPQA+R ++P + SQ+ Sbjct: 90 AFTLFTSAALAEIIRGGLNAVDKGQYEAGMSQGFTSVQILYHIILPQAIRKMLPAIISQF 149 Query: 332 LNLLKNSSLAVAV 344 + ++K++SL +V Sbjct: 150 VTVIKDTSLLYSV 162 Score = 37.4 bits (85), Expect = 4.4, Method: Compositional matrix adjust. Identities = 19/61 (31%), Positives = 36/61 (59%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 I GF T +++ ++ +T+IGT++ R N ++ I +Y+E RN+P L+ IF + Sbjct: 16 IFKGFGLTLYISLIAIVLSTLIGTVLAVMRNGKNPVLRIISSIYIEFVRNVPNLLWIFTI 75 Query: 149 Y 149 + Sbjct: 76 F 76 >gi|242238357|ref|YP_002986538.1| polar amino acid ABC transporter inner membrane subunit [Dickeya dadantii Ech703] gi|242130414|gb|ACS84716.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya dadantii Ech703] Length = 222 Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 37/104 (35%), Positives = 60/104 (57%) Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 A+ EI+R+G+ P+GQ EAA LGLT + V+LP A++ I P L SQ + ++ Sbjct: 102 GAYSTEIIRAGIQVTPKGQWEAARVLGLTKTQTFLRVILPPALQRIYPALVSQCIIVMLG 161 Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 SS+ V F +L I ++T + E+ L+ YL+LS+++ Sbjct: 162 SSVVSQVSFEELTFAANLIQSRTFLSFEVYLVTTLFYLALSMLM 205 >gi|254449912|ref|ZP_05063349.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD [Octadecabacter antarcticus 238] gi|198264318|gb|EDY88588.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD [Octadecabacter antarcticus 238] Length = 219 Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 32/127 (25%), Positives = 72/127 (56%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + L + + + AE+ R+G+ A+P GQ EA+ A LT R+ +++PQA+ +IP L + Sbjct: 93 VGLGLHYSTYTAEVYRTGIDAIPSGQWEASKATNLTARQTWVHIIIPQAIPPMIPALANY 152 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++ + K + L A+ +L++ ++ N + +E + + +L++S+ + + +L A Sbjct: 153 FVAMFKETPLLAAITVLELMNQARSVANYHYKYVEPMTMVGLFFLAVSVPSVILLRKLEA 212 Query: 391 KIALKEK 397 + A ++ Sbjct: 213 RYAPTDR 219 >gi|307132299|ref|YP_003884315.1| amino acid ABC transporter permease, 3-TM region, His/Glu/Gln/Arg/opine [Dickeya dadantii 3937] gi|306529828|gb|ADM99758.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Dickeya dadantii 3937] Length = 221 Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 36/104 (34%), Positives = 60/104 (57%) Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 A+ EI+R+G+ P+GQ EAA LGL+ + V+LP A++ I P L SQ + ++ Sbjct: 102 GAYSTEIIRAGIQVTPKGQWEAARVLGLSRAQTFTRVILPPALQRIYPALVSQCIIVMLG 161 Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 SS+ V F +L I ++T + E+ L+ YL+LS+++ Sbjct: 162 SSVVSQVSFEELTFAANLIQSRTFLSFEVYLVTTLCYLALSMLM 205 >gi|91786596|ref|YP_547548.1| amino acid ABC transporter permease [Polaromonas sp. JS666] gi|91695821|gb|ABE42650.1| amino acid ABC transporter membrane protein 1, PAAT family [Polaromonas sp. JS666] Length = 222 Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 47/161 (29%), Positives = 83/161 (51%), Gaps = 8/161 (4%) Query: 230 FGLPTLVLIALKYQLHF-DKPVLGQFNFI------GGSTVSPEFMSLYIALSCYTAAFIA 282 +G P I Y + F + P L Q FI G +SP + ++ I + A++ Sbjct: 46 YGPPWARRIVGAYVVFFTNTPQLVQIFFIFFALPDAGILLSP-YQAVLIGMVLNAGAYLT 104 Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342 EI R+G +V + ++EAA LG + + R V+LP R + PPL++QY+ + SS+A Sbjct: 105 EIQRAGFESVRQLELEAAETLGFSRIQTIRYVILPHIARVLFPPLSNQYILMTLGSSMAA 164 Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 G +L I ++T ++IE+ + +Y+ L+++ L Sbjct: 165 VFGVEELTGRAYNINSETFRSIEVFSVAAVLYIVLTLIATL 205 >gi|257790427|ref|YP_003181033.1| polar amino acid ABC transporter, inner membrane subunit [Eggerthella lenta DSM 2243] gi|317490080|ref|ZP_07948569.1| binding-protein-dependent transport system inner membrane component [Eggerthella sp. 1_3_56FAA] gi|325833821|ref|ZP_08166171.1| putative arginine ABC transporter, permease protein ArtQ [Eggerthella sp. HGA1] gi|257474324|gb|ACV54644.1| polar amino acid ABC transporter, inner membrane subunit [Eggerthella lenta DSM 2243] gi|316910785|gb|EFV32405.1| binding-protein-dependent transport system inner membrane component [Eggerthella sp. 1_3_56FAA] gi|325485179|gb|EGC87651.1| putative arginine ABC transporter, permease protein ArtQ [Eggerthella sp. HGA1] Length = 217 Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 34/116 (29%), Positives = 68/116 (58%), Gaps = 5/116 (4%) Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 AA+ EI R G+ ++PRGQ EAA LG + + ++LPQ ++ I+P ++++ + L+K+ Sbjct: 99 AAYFGEIYRGGIQSIPRGQYEAAEVLGYSRFQTFMKIVLPQVVKRILPAMSNEIITLVKD 158 Query: 338 SSLAVAVGFADLVS----VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 +SLA +G ++ S + + ++ I ++ W+F ++ + I++ RLN Sbjct: 159 TSLAFVLGIMEMFSQAKAIAASQVSMLPYVIAGVIYWVFNFI-VEIILTRVEKRLN 213 >gi|298486824|ref|ZP_07004880.1| Amino acid ABC transporter, permease protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298158691|gb|EFH99755.1| Amino acid ABC transporter, permease protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 227 Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 39/103 (37%), Positives = 56/103 (54%), Gaps = 3/103 (2%) Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 +A+ AEI+RS LI V +GQ +A AL A R ++LPQA+ +IPP +Q + LLK Sbjct: 105 SAYGAEIIRSALINVSQGQRDAVRALDFGPISAFRRIILPQALPFMIPPTGNQLVELLKT 164 Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380 +SL + DL G +I GQ LIW + + +M Sbjct: 165 TSLVSLITLTDLTFTGSQLITTLGQQ---TLIWSIVLVCYFVM 204 >gi|239820511|ref|YP_002947696.1| polar amino acid ABC transporter, inner membrane subunit [Variovorax paradoxus S110] gi|239805364|gb|ACS22430.1| polar amino acid ABC transporter, inner membrane subunit [Variovorax paradoxus S110] Length = 223 Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 41/113 (36%), Positives = 61/113 (53%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F++ AL+ A+ AEI R L+AVP+ Q EAA LGL+ +A V+LPQA R + Sbjct: 91 FLAGVAALALSFGAYAAEIARGALLAVPKTQREAARTLGLSRAQALWTVVLPQAARFALA 150 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378 P +Q + LLK +S+ VG +L+ T + + L IYL+L+ Sbjct: 151 PFGNQSIVLLKQTSIVSIVGCDELMRKAAEASGATREPFTMYLAAACIYLALT 203 >gi|322831660|ref|YP_004211687.1| polar amino acid ABC transporter inner membrane subunit [Rahnella sp. Y9602] gi|321166861|gb|ADW72560.1| polar amino acid ABC transporter, inner membrane subunit [Rahnella sp. Y9602] Length = 217 Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 45/140 (32%), Positives = 74/140 (52%), Gaps = 8/140 (5%) Query: 233 PTLVLIALKYQLHFDKPVLGQF--NFIG----GSTVSPEFMSLYIALSCYTAAFIAEIVR 286 PTL + L +L P+L Q F G G VSP + + +AL+ YT+A++ +I Sbjct: 49 PTL-FVRLYSELFQGTPLLMQLFLAFFGLGLFGINVSP-WTAAALALTLYTSAYLVDIWS 106 Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346 + A+P+GQ EA+ LGL + V+ PQA+R I P + ++K ++LA +GF Sbjct: 107 GSIAALPKGQWEASRCLGLNFGQTLWRVITPQALRIAIAPTVGFSVQVVKGTALASIIGF 166 Query: 347 ADLVSVGGTIINQTGQAIEI 366 +L G + N T + ++ Sbjct: 167 VELTKAGTMLNNVTYEPFKV 186 >gi|238762102|ref|ZP_04623075.1| Arginine transport system permease protein artQ [Yersinia kristensenii ATCC 33638] gi|238699830|gb|EEP92574.1| Arginine transport system permease protein artQ [Yersinia kristensenii ATCC 33638] Length = 238 Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 62/204 (30%), Positives = 106/204 (51%), Gaps = 18/204 (8%) Query: 191 VFSFVLGIVLS-LFATRLSRHF----HEKTG-----KALPLLYISTFLIFGLPTLVLI-- 238 V + VLG+VL+ LFA S + + TG + LP + + F+ FG L+++ Sbjct: 19 VCALVLGLVLAMLFAVCESSRWKVVSYLTTGWVTILRGLPEILVVLFIYFGSSQLLMMLS 78 Query: 239 -ALKYQLH-FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296 L+ F+ P+ + N I VSP F+ IAL+ +A+ ++ +R L AVP GQ Sbjct: 79 DGFTLNLYLFELPI--KLN-IDDFEVSP-FLCGVIALALLYSAYASQTLRGALKAVPIGQ 134 Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356 E+ ALGL+ +++PQ R +P L +Q+L LLK+++L + DL+ +I Sbjct: 135 WESGQALGLSQTAIFFRLIMPQMWRHALPGLGNQWLVLLKDTALVSLISVNDLMLQTKSI 194 Query: 357 INQTGQAIEIILIWMFIYLSLSIM 380 +T + +I IYL ++++ Sbjct: 195 ATRTQEPFTWYMIAAAIYLVVTLL 218 >gi|330829215|ref|YP_004392167.1| histidine/lysine/arginine/ornithine ABC transporter permease [Aeromonas veronii B565] gi|328804351|gb|AEB49550.1| ABC-type histidine/lysine/arginine/ornithine transporter, permease protein [Aeromonas veronii B565] Length = 230 Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 38/137 (27%), Positives = 68/137 (49%) Query: 255 NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLV 314 N S S + +A + TAA+ AEIVR + +PRGQ+EAA A G+T + + Sbjct: 84 NSAAWSLFSEAWFCALLAFTLNTAAYTAEIVRGAVHNMPRGQIEAANAFGMTRWQTLTRI 143 Query: 315 LLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374 +LP + R +P +++ + +L+ S++A + DL I ++ E L +Y Sbjct: 144 ILPNSFRRALPAYSNEVIFMLQGSAVAGIITIVDLTGAARIINSRYYSPFEAFLTAGLLY 203 Query: 375 LSLSIMIALFMNRLNAK 391 + L+ +I + A+ Sbjct: 204 MLLTFVIVWLFKKWEAR 220 >gi|306825909|ref|ZP_07459248.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sp. oral taxon 071 str. 73H25AP] gi|304432270|gb|EFM35247.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sp. oral taxon 071 str. 73H25AP] Length = 240 Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 49/171 (28%), Positives = 90/171 (52%), Gaps = 13/171 (7%) Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL---- 244 I + + VL + +LF L + + + ++ L+Y++ I P ++LI Y L Sbjct: 23 IMIVAMVLSFLPALFLA-LGQIYKVRGVRSFSLVYLA--FIRATPPILLILFFYSLFPSL 79 Query: 245 --HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302 F K + FN + P + + +I S T ++EI+RS ++ V +GQ+EAA A Sbjct: 80 LNQFLKSIGSDFNIF---KLDPLYYA-FIIYSLMTVGSLSEILRSAILTVDKGQLEAAHA 135 Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353 +GLT +A ++ PQA+RS +P L + +N++K +SL + D+ ++ Sbjct: 136 IGLTTTQAYLRIVFPQALRSALPNLANLVINIVKGTSLVFVMTIKDITAIA 186 >gi|152984149|ref|YP_001349489.1| ABC transporter permease [Pseudomonas aeruginosa PA7] gi|150959307|gb|ABR81332.1| probable permease of ABC transporter [Pseudomonas aeruginosa PA7] Length = 214 Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 42/149 (28%), Positives = 80/149 (53%), Gaps = 5/149 (3%) Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309 +L F I G S F + L Y AA+ E+VR G+++VP AA +LGL++R+ Sbjct: 71 LLNSFKSILGLDCS-AFAVACLVLGVYAAAYCTEVVRGGVLSVPPSVRRAARSLGLSYRQ 129 Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369 ++LP A R P + L+++K++SL + +G +L+ TI+ + + + ++ I Sbjct: 130 DLFHIVLPMAARVAFPGWVNLTLSVMKDTSLVLWIGIVELLRASQTIVTRIQEPLFVLCI 189 Query: 370 WMFIYLSLSIMIALFMNRLNAKIALKEKK 398 +Y +S ++A RL A++ + ++ Sbjct: 190 AGLVYYLMSWVVA----RLGARLERRWQQ 214 >gi|73542272|ref|YP_296792.1| amino acid ABC transporter permease [Ralstonia eutropha JMP134] gi|72119685|gb|AAZ61948.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Ralstonia eutropha JMP134] Length = 234 Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 55/209 (26%), Positives = 102/209 (48%), Gaps = 18/209 (8%) Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249 F VLG+V++L H K + Y+S ++ G P LV I + +++ P Sbjct: 44 MAFGLVLGMVVALMGIS-----HNPVLKGIARTYVS--IMRGTPLLVQI---FVVYYGLP 93 Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309 +G + P + + LS A+++E +R ++ + RGQ AA +LGLT + Sbjct: 94 GIG-------VALEPTPAGV-LTLSLNVGAYLSESMRGAILGIARGQWLAAYSLGLTPGQ 145 Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369 R V+ PQA+R +P L++ ++L+K++SL + +L+ +I T Q + + L Sbjct: 146 TLRYVVGPQALRLAVPSLSNSLISLIKDTSLVSVITVTELLRTAQEVIAATYQPLPLYLA 205 Query: 370 WMFIYLSLSIMIALFMNRLNAKIALKEKK 398 IY LS ++ + L +++L + Sbjct: 206 VAAIYWVLSTGLSGLQHVLERRLSLPGRH 234 >gi|319940742|ref|ZP_08015083.1| polar amino acid ABC transporter [Sutterella wadsworthensis 3_1_45B] gi|319805802|gb|EFW02576.1| polar amino acid ABC transporter [Sutterella wadsworthensis 3_1_45B] Length = 366 Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 32/84 (38%), Positives = 50/84 (59%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + I ++ + AA++AE VR GL + +GQ AA +LG T R+ + V+LPQA+ +IIP Sbjct: 226 FWRVAIGIALFQAAYMAETVRGGLQTISQGQYAAARSLGFTERQCYQYVILPQALVAIIP 285 Query: 326 PLTSQYLNLLKNSSLAVAVGFADL 349 + L+ ++SL V DL Sbjct: 286 AFVNSLLSCFMDTSLVTVVSMYDL 309 >gi|160913600|ref|ZP_02076290.1| hypothetical protein EUBDOL_00076 [Eubacterium dolichum DSM 3991] gi|158434061|gb|EDP12350.1| hypothetical protein EUBDOL_00076 [Eubacterium dolichum DSM 3991] Length = 227 Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 32/133 (24%), Positives = 77/133 (57%), Gaps = 1/133 (0%) Query: 260 STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319 + VSP F+ I S + A+++EI+R+G+ + +GQ+EAA ALG++ + + +++P A Sbjct: 93 NNVSP-FVWALIVFSLNSGAYLSEIIRAGVEGIDKGQIEAAKALGVSRKDIAKDIVVPLA 151 Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379 R+++P + ++++ L K +++ +G D++ + ++ E +L+ Y ++ Sbjct: 152 FRNVLPAVVNEFITLTKETAVVGVIGLHDMMYYSDAVTSKFYSFFEPLLVVFVAYYIMNK 211 Query: 380 MIALFMNRLNAKI 392 +++L + K+ Sbjct: 212 VLSLLGKWVERKL 224 >gi|126668662|ref|ZP_01739613.1| amino acid ABC transproter, permease protein [Marinobacter sp. ELB17] gi|126626840|gb|EAZ97486.1| amino acid ABC transproter, permease protein [Marinobacter sp. ELB17] Length = 189 Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 31/91 (34%), Positives = 60/91 (65%), Gaps = 2/91 (2%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + L+ + +A++AE +R+ +I V R Q EAA+++G+T+ + R ++LPQA R +P L + Sbjct: 62 MGLTLHFSAYMAESIRAAIIGVDRSQTEAALSIGMTNIQLMRRIVLPQATRVALPTLMNY 121 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361 +++++K +SLA +G +L +G T +G Sbjct: 122 FIDMIKATSLAFTLGVTEL--MGATQKEASG 150 >gi|119383037|ref|YP_914093.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Paracoccus denitrificans PD1222] gi|119372804|gb|ABL68397.1| hydroxyectoine ABC transporter membrane protein / ectoine ABC transporter membrane protein [Paracoccus denitrificans PD1222] Length = 219 Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 42/133 (31%), Positives = 74/133 (55%), Gaps = 3/133 (2%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P + I + + A + AE+ R G+ AVPRGQ EAA A LT R+ V+LPQA+ + Sbjct: 86 PALTAGVIGMGLHYATYAAEVYRGGIEAVPRGQWEAAKATNLTTRQTWLHVVLPQAVPPM 145 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI--WMFIYLSLSIMI 381 IP + + L + K + L A+ +L++ ++ N + + +E + + MF+ +SL +I Sbjct: 146 IPAMANYLLAMFKETPLLSAITVLELMNQAKSVANSSYRYVEPMTLVGVMFLVVSLISVI 205 Query: 382 AL-FMNRLNAKIA 393 L ++ R +I+ Sbjct: 206 GLRWLERRYGRIS 218 >gi|124027567|ref|YP_001012887.1| glutamate/aspartate transport system permease protein [Hyperthermus butylicus DSM 5456] gi|123978261|gb|ABM80542.1| glutamate/aspartate transport system permease protein [Hyperthermus butylicus DSM 5456] Length = 228 Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 47/159 (29%), Positives = 81/159 (50%), Gaps = 31/159 (19%) Query: 213 EKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIA 272 E+ + +PLL I + FGLP L G + P + ++ Sbjct: 62 EEVIRGIPLLVIMFLVYFGLPEL-----------------------GVRLDP-LTAAVVS 97 Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 + + A+ ++I+RS ++++P GQ EAA+ALG++ +A V+ PQA R IP L +Q+ Sbjct: 98 IGIRSLAYQSQIIRSAILSIPAGQWEAALALGMSPLEAFVNVIAPQAFRIAIPGLVNQFT 157 Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371 LK++S+A A+G A+ I Q+ +IIL ++ Sbjct: 158 VDLKDTSIAYAIGVAE-------IFTQSVHVAQIILDYL 189 >gi|34496308|ref|NP_900523.1| histidine transport system permease [Chromobacterium violaceum ATCC 12472] gi|34102161|gb|AAQ58528.1| histidine transport system permease protein [Chromobacterium violaceum ATCC 12472] Length = 229 Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 48/167 (28%), Positives = 82/167 (49%), Gaps = 2/167 (1%) Query: 226 TFLIFGLPTLVLIALK-YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284 T L+ G+P LVL+ L Y L + + I + P F+S + L A+ E Sbjct: 54 TTLVRGVPDLVLMLLIFYSLQIGMNKITEALRIEQIDLDP-FVSGIVTLGFIYGAYFTET 112 Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344 +R ++VP+GQ+EA IA G+T + V PQ MR +P +++ + +LK ++L + Sbjct: 113 LRGAFLSVPKGQIEAGIAYGMTSWQVFHRVQFPQMMRFALPGISNNWQVMLKATALVSII 172 Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 G AD+V T + L+ IYL+L+ + + +L + Sbjct: 173 GLADVVKASVDAGKSTYKVFFFTLVAGAIYLALTTLSNFVLAKLERR 219 >gi|26991430|ref|NP_746855.1| amino acid ABC transporter, permease protein [Pseudomonas putida KT2440] gi|24986503|gb|AAN70319.1|AE016673_4 amino acid ABC transporter, permease protein [Pseudomonas putida KT2440] gi|313500660|gb|ADR62026.1| Amino acid ABC transporter, permease protein [Pseudomonas putida BIRD-1] Length = 219 Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 47/166 (28%), Positives = 89/166 (53%), Gaps = 9/166 (5%) Query: 233 PTLVLIALKYQLHFDKP--VLGQFNFIGGSTVS---PEFMSLYIALSCYTAAFIAEIVRS 287 P+LV++ +L P +L Q+ + G +V+ F + +A++ TAA+ +EI+R Sbjct: 54 PSLVVV----ELGRGAPALILLQYFYFGLPSVNLTLTSFWAAALAMAYCTAAYTSEIIRG 109 Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347 G+ +V GQ EAA +GL A R V+LPQA+R +P L + + + SSL + Sbjct: 110 GIESVAAGQTEAAEVIGLNRFDALRFVILPQALRVALPSLLGFSIMMFQASSLCFTIALP 169 Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393 ++VS +I + T + + ++++ +Y ++ L + L ++A Sbjct: 170 EIVSRASSIGSSTFEYMPVLILAGLMYAAVCAPATLGVAALEKRLA 215 >gi|46190618|ref|ZP_00121272.2| COG0765: ABC-type amino acid transport system, permease component [Bifidobacterium longum DJO10A] gi|189438954|ref|YP_001954035.1| amino acid ABC transporter permease [Bifidobacterium longum DJO10A] gi|322689600|ref|YP_004209334.1| amino acid ABC transporter permease [Bifidobacterium longum subsp. infantis 157F] gi|322691561|ref|YP_004221131.1| amino acid ABC transporter permease [Bifidobacterium longum subsp. longum JCM 1217] gi|189427389|gb|ACD97537.1| ABC-type amino acid transport system permease component [Bifidobacterium longum DJO10A] gi|291516169|emb|CBK69785.1| amino acid ABC transporter membrane protein 1, PAAT family (TC 3.A.1.3.-) [Bifidobacterium longum subsp. longum F8] gi|320456417|dbj|BAJ67039.1| amino acid ABC transporter permease component [Bifidobacterium longum subsp. longum JCM 1217] gi|320460936|dbj|BAJ71556.1| amino acid ABC transporter permease component [Bifidobacterium longum subsp. infantis 157F] Length = 219 Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 53/194 (27%), Positives = 89/194 (45%), Gaps = 25/194 (12%) Query: 204 ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVS 263 A ++ R + E + + PLL FL FGLP L ++ + + F+GGS Sbjct: 51 ARQIVRIYIELS-RNTPLLVQLYFLYFGLPKLGVV-----WSAETCAIVGLGFLGGS--- 101 Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 ++AE +R GL AVP Q E A LGLT + V+LPQA+ + Sbjct: 102 ----------------YMAEAMRGGLEAVPNVQRETAYVLGLTSTQTITRVILPQAVSTA 145 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 IP + + + L K SS+ A+ AD++ + +I E + + + YL + + I++ Sbjct: 146 IPGVVANVIFLFKESSVVSAIALADVMYMAKDLIGMYYSTYESLFMLVVAYLVILLPISI 205 Query: 384 FMNRLNAKIALKEK 397 F L + + + Sbjct: 206 FGTWLERRFDYERR 219 >gi|262278740|ref|ZP_06056525.1| ArtM protein [Acinetobacter calcoaceticus RUH2202] gi|262259091|gb|EEY77824.1| ArtM protein [Acinetobacter calcoaceticus RUH2202] Length = 221 Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 55/206 (26%), Positives = 105/206 (50%), Gaps = 26/206 (12%) Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251 FS +LG +L + T KAL LY+ I +P LVL+ + Y Sbjct: 32 FSAILGTILGVIMTS-----KNIAVKALCRLYLEAIRI--IPILVLLFVFY--------- 75 Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYT---AAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308 F F + + +F ++++ + + A + ++VR+ + ++ + Q ++A ALGLTH Sbjct: 76 --FGF--ATWFNWQFSAMWVCVVVFVLWGTAEMGDLVRAAITSIDQHQRDSAYALGLTHV 131 Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368 +A V+ PQ+++ + P + + ++K SSLAV +G +++ VG II + + Sbjct: 132 QALVYVIFPQSLKRVTPGAINLFTRMVKTSSLAVLIGVVEVIKVGQQIIENSLLTVPSAS 191 Query: 369 IWM--FIYLSLSIMIALFMNRLNAKI 392 +W+ FI++ L +I ++RL A + Sbjct: 192 LWIYGFIFI-LYFLICYPLSRLAAHL 216 Score = 39.7 bits (91), Expect = 0.91, Method: Compositional matrix adjust. Identities = 24/73 (32%), Positives = 40/73 (54%) Query: 77 VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136 + Y +S+ ++ G T +AF + + I+GT++G S N V +CR+Y+E Sbjct: 3 LDYLFQASHLERLMWGLWATAKIAFISVFFSAILGTILGVIMTSKNIAVKALCRLYLEAI 62 Query: 137 RNIPPLVVIFFLY 149 R IP LV++F Y Sbjct: 63 RIIPILVLLFVFY 75 >gi|260461177|ref|ZP_05809426.1| polar amino acid ABC transporter, inner membrane subunit [Mesorhizobium opportunistum WSM2075] gi|259033211|gb|EEW34473.1| polar amino acid ABC transporter, inner membrane subunit [Mesorhizobium opportunistum WSM2075] Length = 237 Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 41/124 (33%), Positives = 70/124 (56%), Gaps = 7/124 (5%) Query: 231 GLPTLVLIALKYQLHFDKPV----LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286 G+P L+ I Y L++ + +G+F G P F + +A+ + A+ AE+ R Sbjct: 68 GVPDLLTI---YLLYYGGSIALTEIGKFFGSAGFVGLPTFATGVLAIGIISGAYQAEVYR 124 Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346 +AV GQ EA+ ALGL+ ++ RLV++PQ MR +P L + + +LK+S+L +G Sbjct: 125 GAYLAVDLGQFEASKALGLSRFQSLRLVIVPQLMRHALPGLGNVWQLVLKDSALISVIGL 184 Query: 347 ADLV 350 +L+ Sbjct: 185 VELM 188 Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust. Identities = 22/69 (31%), Positives = 35/69 (50%) Query: 81 SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140 + A+L+ TF L+ G + + G + GRLS L +W+ + Y VFR +P Sbjct: 11 GKGGWGGALLLAAGVTFALSVLGFLLGALFGAVAAGGRLSTRALPSWVAKGYGTVFRGVP 70 Query: 141 PLVVIFFLY 149 L+ I+ LY Sbjct: 71 DLLTIYLLY 79 >gi|317047528|ref|YP_004115176.1| polar amino acid ABC transporter inner membrane subunit [Pantoea sp. At-9b] gi|316949145|gb|ADU68620.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea sp. At-9b] Length = 237 Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 55/187 (29%), Positives = 92/187 (49%), Gaps = 12/187 (6%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLH-----FDKPVLGQF-NFIGGSTVSPEFMSLY 270 + LP + + F+ FG L L+ L H F PV Q NF VSP F+ Sbjct: 55 RGLPEILVVLFIYFGASQL-LLTLSDGFHINLGLFSIPVQVQIENF----DVSP-FLCGV 108 Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IAL+ +A+ ++ +R L AVP GQ E+ ALG+ +++PQ R +P L +Q Sbjct: 109 IALAMLYSAYASQTLRGALKAVPVGQWESGQALGMKKSAIFFRLIMPQMWRHALPGLGNQ 168 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 +L LLK+++L + DL+ +I +T + L+ IYL +++ + R+ + Sbjct: 169 WLVLLKDTALVSLISVNDLMLQTKSIATRTQEPFTWYLVAAAIYLIITLFSQAVLRRIES 228 Query: 391 KIALKEK 397 + E+ Sbjct: 229 RTTRFER 235 >gi|121607337|ref|YP_995144.1| polar amino acid ABC transporter inner membrane subunit [Verminephrobacter eiseniae EF01-2] gi|121551977|gb|ABM56126.1| polar amino acid ABC transporter, inner membrane subunit [Verminephrobacter eiseniae EF01-2] Length = 234 Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 49/182 (26%), Positives = 83/182 (45%), Gaps = 12/182 (6%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 + +P L + +G+P LV QL DK G VSP L L Sbjct: 55 RGVPDLVLMLLFFYGVPALV------QLALDKS-----GSDAGFDVSPLGAGLAT-LGLI 102 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 ++ E R ++A+P+GQ+EAA A GL + ++LPQ R +P T+ +L L+K Sbjct: 103 FGGYLTETFRGAILAIPKGQIEAACAFGLGRLRIAWRIVLPQMARLALPGFTNTWLVLVK 162 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 +++L +G D++ T Q L+ +YLS++ + L + L + A Sbjct: 163 STALVSVLGLEDIMFRAKNAAQATRQPFTFFLLTAAVYLSITTVSMLALRWLERRGAHDT 222 Query: 397 KK 398 ++ Sbjct: 223 RR 224 >gi|238928187|ref|ZP_04659947.1| amino-acid ABC superfamily ATP binding cassette transporter permease protein [Selenomonas flueggei ATCC 43531] gi|238884147|gb|EEQ47785.1| amino-acid ABC superfamily ATP binding cassette transporter permease protein [Selenomonas flueggei ATCC 43531] Length = 225 Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 39/124 (31%), Positives = 68/124 (54%), Gaps = 1/124 (0%) Query: 260 STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319 V P + +++I + T A + E+ RS L+A+P+GQ+EA GL+ + V+LPQA Sbjct: 90 EAVDPFWYAVFI-FTLNTVALLTEVFRSALLAIPKGQLEAGAVCGLSEAETYLHVILPQA 148 Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379 + +P + + +NL+K +SLA + D+++VG + IE L +YL L Sbjct: 149 LVVALPSIANITVNLIKGTSLAFLMTVKDIMAVGKVAASYGYNYIEAYLDVFIVYLILCT 208 Query: 380 MIAL 383 ++ L Sbjct: 209 IVQL 212 >gi|322374410|ref|ZP_08048924.1| amino acid ABC transporter, permease protein [Streptococcus sp. C300] gi|321279910|gb|EFX56949.1| amino acid ABC transporter, permease protein [Streptococcus sp. C300] Length = 229 Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 60/217 (27%), Positives = 107/217 (49%), Gaps = 29/217 (13%) Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF---GLPTLV 236 ++T+ A + +FS LGIV++ FA ++ PL Y+ I+ G P L+ Sbjct: 32 SMTLQVFALVLIFSIPLGIVVA-FALQVRWK---------PLHYLIDLYIWVMRGTPLLL 81 Query: 237 -LIALKYQLHFDKPVLG-QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294 LI + Y L P +G + + + + IA AA+ AEI R G+ +P+ Sbjct: 82 QLIFIYYVL----PSIGIRLDRLPAAV---------IAFVLNYAAYFAEIFRGGIETIPK 128 Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354 GQ EAA L + R ++LPQ + ++P + ++ ++L+K++SL A+G +DL+ Sbjct: 129 GQYEAAKVLKFSPFDTVRYIILPQVTKIVLPSVFNEIMSLVKDTSLVYALGISDLILASR 188 Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 T N+ + + L IYL + ++ + +L K Sbjct: 189 TAANRDASLVPMFLAGA-IYLIMIGLVTIVAKKLEKK 224 >gi|23464701|ref|NP_695304.1| permease protein of ABC transporter system [Bifidobacterium longum NCC2705] gi|227546807|ref|ZP_03976856.1| ABC superfamily ATP binding cassette transporter, membrane protein [Bifidobacterium longum subsp. infantis ATCC 55813] gi|23325266|gb|AAN23940.1| permease protein of ABC transporter system [Bifidobacterium longum NCC2705] gi|227212769|gb|EEI80650.1| ABC superfamily ATP binding cassette transporter, membrane protein [Bifidobacterium longum subsp. infantis ATCC 55813] Length = 248 Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 50/178 (28%), Positives = 81/178 (45%), Gaps = 24/178 (13%) Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279 PLL FL FGLP L ++ + + F+GGS Sbjct: 95 PLLVQLYFLYFGLPKLGVV-----WSAETCAIVGLGFLGGS------------------- 130 Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339 ++AE +R GL AVP Q E A LGLT + V+LPQA+ + IP + + + L K SS Sbjct: 131 YMAEAMRGGLEAVPNVQRETAYVLGLTSTQTITRVILPQAVSTAIPGVVANVIFLFKESS 190 Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 + A+ AD++ + +I E + + + YL + + I++F L + + + Sbjct: 191 VVSAIALADVMYMAKDLIGMYYSTYESLFMLVVAYLVILLPISIFGTWLERRFDYERR 248 Score = 38.5 bits (88), Expect = 1.9, Method: Compositional matrix adjust. Identities = 29/111 (26%), Positives = 47/111 (42%), Gaps = 19/111 (17%) Query: 43 WCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVN----TFW 98 W VY +K E +G P T D S+ FVN T + Sbjct: 9 WVAKTVYAQEKKR---------------EAKEGARPMTFDWSFVQRYAPFFVNGTLMTLF 53 Query: 99 LAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 ++ G++ A +G + ++ + I R+Y+E+ RN P LV ++FLY Sbjct: 54 ISVFGILLAIAVGLVCAGVEIARIPVARQIVRIYIELSRNTPLLVQLYFLY 104 >gi|325273127|ref|ZP_08139424.1| polar amino acid ABC transporter inner membrane subunit [Pseudomonas sp. TJI-51] gi|324101732|gb|EGB99281.1| polar amino acid ABC transporter inner membrane subunit [Pseudomonas sp. TJI-51] Length = 230 Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 51/188 (27%), Positives = 91/188 (48%), Gaps = 13/188 (6%) Query: 214 KTGKALPLLYISTF---LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP-----E 265 KT PL ++ F L+ G+P L+ + L Y F +G N +G + P Sbjct: 41 KTSSIKPLQWLGGFYSTLVRGVPELLWVLLIY---FG--TVGLMNTLGEALNMPGLELSA 95 Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + IAL A+ E+ R ++A+P+G EA +ALGL+ + ++LPQ R +P Sbjct: 96 FAAGVIALGLCFGAYATEVFRGAILAIPKGHREAGLALGLSKGRILSRIILPQMWRIALP 155 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 L + ++ L+K+++L +G +++ + T ++ IYLSL+++ M Sbjct: 156 GLGNLFMILMKDTALVSVIGLEEIMRHAQIGVTVTKAPFTFYMVAACIYLSLTVIAMTGM 215 Query: 386 NRLNAKIA 393 L + A Sbjct: 216 YFLEKRAA 223 >gi|296272602|ref|YP_003655233.1| polar amino acid ABC transporter inner membrane subunit [Arcobacter nitrofigilis DSM 7299] gi|296096776|gb|ADG92726.1| polar amino acid ABC transporter, inner membrane subunit [Arcobacter nitrofigilis DSM 7299] Length = 216 Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 42/144 (29%), Positives = 76/144 (52%), Gaps = 5/144 (3%) Query: 236 VLIALKYQLHFDKPVLGQF--NFIGGSTVS---PEFMSLYIALSCYTAAFIAEIVRSGLI 290 +LI + ++ P+L Q F G S + E+ + +AL+ +T+AF+ EI L Sbjct: 51 ILIKIYVEIFQGTPLLMQLYLAFFGLSLIGIDINEWTAASLALTLFTSAFLCEIWSGCLN 110 Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 +VP+GQ EAA +GL + ++ V++PQ +R P + ++K ++LA +GF +L Sbjct: 111 SVPKGQWEAAKTMGLNYYQSMIHVIIPQTIRVATAPTIGFSVQVVKGTALASIIGFIELT 170 Query: 351 SVGGTIINQTGQAIEIILIWMFIY 374 G + N T + ++ + IY Sbjct: 171 KAGTMLNNATFEPFKVFTMVAIIY 194 >gi|260889729|ref|ZP_05900992.1| amino acid ABC transporter, permease protein [Leptotrichia hofstadii F0254] gi|260860335|gb|EEX74835.1| amino acid ABC transporter, permease protein [Leptotrichia hofstadii F0254] Length = 218 Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 32/97 (32%), Positives = 58/97 (59%) Query: 255 NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLV 314 NF G V +M+ I AA++ EI+RSG+ ++ +GQ EAA LG ++ + V Sbjct: 78 NFGGYKIVLAPYMAATITFIINYAAYLVEIMRSGIESIDKGQHEAAKVLGYSYWQKIIYV 137 Query: 315 LLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 +LPQA+R ++P L ++ + L+K++SL + +++ Sbjct: 138 ILPQAIRRVLPTLGNEAITLIKDTSLVYVLAVTEVMK 174 >gi|238026653|ref|YP_002910884.1| Polar amino acid ABC transporter inner membrane subunit [Burkholderia glumae BGR1] gi|237875847|gb|ACR28180.1| Polar amino acid ABC transporter, inner membrane subunit [Burkholderia glumae BGR1] Length = 229 Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 51/193 (26%), Positives = 95/193 (49%), Gaps = 13/193 (6%) Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY---QLHFDKPVLGQFNFIGGSTV 262 +LS H + +AL Y T LI +P LVL+ L + Q+ ++ + +G + Sbjct: 39 KLSTH---RVLRALATAY--TTLIRSVPDLVLMLLLFYSIQIWLNQIT----DLLGWDQI 89 Query: 263 SPE-FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321 + F++ + L A+ E R ++VPRGQ+EA A G++ + +L PQ MR Sbjct: 90 DIDPFVAGVLTLGFIYGAYFTETFRGAFLSVPRGQLEAGAAYGMSGMRVFTRILFPQMMR 149 Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 +P + + + L+K ++L +G AD+V T + IL+ +YL+++ + Sbjct: 150 FALPGIGNNWQVLVKATALVSIIGLADVVKAAQDAGKSTFKMFFFILVAALVYLAITTLS 209 Query: 382 ALFMNRLNAKIAL 394 L + +L + +L Sbjct: 210 NLVLRQLERRYSL 222 >gi|226940536|ref|YP_002795610.1| amino acid ABC transporter, permease protein [Laribacter hongkongensis HLHK9] gi|226715463|gb|ACO74601.1| probable amino acid ABC transporter, permease protein [Laribacter hongkongensis HLHK9] Length = 219 Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 55/201 (27%), Positives = 101/201 (50%), Gaps = 16/201 (7%) Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252 S LG++L FA L R L LY+S + G P LV I + +++ P +G Sbjct: 28 SMALGLLLG-FAIALVRLTRLPVLAPLAALYVSA--MRGTPLLVQI---FVIYYGLPGIG 81 Query: 253 -QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311 +F+ + +AL+ AA+++E +R + V GQ +AA +LG + ++ Sbjct: 82 IEFDPVTAGI---------LALTMNAAAYLSESMRGAIAGVSTGQWQAASSLGFSWWQSM 132 Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371 R ++ PQA+R +P L++ ++L+K++SL + ++L+ II QT Q + + L Sbjct: 133 RFIIAPQALRLAVPSLSNTLISLIKDTSLVSVITVSELMLATKEIIAQTYQPLPLYLAAA 192 Query: 372 FIYLSLSIMIALFMNRLNAKI 392 IY +S+ R+ ++ Sbjct: 193 GIYWLMSLAFEQVQKRVENRL 213 >gi|218506830|ref|ZP_03504708.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium etli Brasil 5] Length = 116 Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 33/85 (38%), Positives = 52/85 (61%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + +AL+ + ++ + EIVR L A+P+GQ EAA A+GLT + VL PQAMR +P Sbjct: 22 FSAGVLALAIFCSSHVGEIVRGALQAIPKGQTEAAKAIGLTFTQTFTSVLWPQAMRQCLP 81 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLV 350 + ++K S+L +G A+L+ Sbjct: 82 AWVNTAAEMVKASTLLSVIGVAELL 106 >gi|146279204|ref|YP_001169362.1| Asp/Glu racemase [Rhodobacter sphaeroides ATCC 17025] gi|145557445|gb|ABP72057.1| Asp/Glu racemase [Rhodobacter sphaeroides ATCC 17025] Length = 219 Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 40/148 (27%), Positives = 79/148 (53%), Gaps = 5/148 (3%) Query: 249 PVLGQFNFI-----GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 P+L Q FI + P ++ I + + A + AE+ R+G+ VPRGQ EAA A Sbjct: 66 PLLVQLYFIFYVLPDAGVLLPPLVAGVIGMGLHYATYAAEVYRAGIENVPRGQWEAARAT 125 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363 LT + R V++PQA+ +IP L + + + K + L A+ +L++ ++ N + + Sbjct: 126 NLTAAQTWRHVIVPQAIPPMIPALANYLIAMFKETPLLSAITVLELMNQAKSVANSSYRY 185 Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAK 391 +E + + ++L++S++ + + L + Sbjct: 186 VEPMTLVGVLFLAMSLVSVVLLRWLEHR 213 >gi|25010743|ref|NP_735138.1| hypothetical protein gbs0688 [Streptococcus agalactiae NEM316] gi|77408350|ref|ZP_00785091.1| amino acid ABC transporter, permease protein [Streptococcus agalactiae COH1] gi|77410781|ref|ZP_00787139.1| amino acid ABC transporter, permease protein [Streptococcus agalactiae CJB111] gi|77413503|ref|ZP_00789693.1| amino acid ABC transporter, permease protein [Streptococcus agalactiae 515] gi|23095097|emb|CAD46332.1| Unknown [Streptococcus agalactiae NEM316] gi|77160447|gb|EAO71568.1| amino acid ABC transporter, permease protein [Streptococcus agalactiae 515] gi|77163160|gb|EAO74113.1| amino acid ABC transporter, permease protein [Streptococcus agalactiae CJB111] gi|77173031|gb|EAO76159.1| amino acid ABC transporter, permease protein [Streptococcus agalactiae COH1] gi|319744753|gb|EFV97095.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus agalactiae ATCC 13813] Length = 216 Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 26/73 (35%), Positives = 50/73 (68%) Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 + + +T+A +AEI+R GL V +GQ EA ++ G T+ + +++ PQA R ++P + SQ+ Sbjct: 87 SFTIFTSAALAEIIRGGLNGVDKGQTEAGLSQGFTYLQVFIIIIFPQAFRKMLPAIISQF 146 Query: 332 LNLLKNSSLAVAV 344 + ++K++SL +V Sbjct: 147 VTVIKDTSLLYSV 159 Score = 37.0 bits (84), Expect = 4.8, Method: Compositional matrix adjust. Identities = 20/61 (32%), Positives = 35/61 (57%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L GF T +++F ++ + GTL+ R S N + I +Y+E RN+P L+ IF + Sbjct: 13 LLQGFGLTLYISFISILLSMFFGTLLAIMRNSKNPIWKLIASIYIEFVRNVPNLLWIFII 72 Query: 149 Y 149 + Sbjct: 73 F 73 >gi|332180728|gb|AEE16416.1| polar amino acid ABC transporter, inner membrane subunit [Treponema brennaborense DSM 12168] Length = 211 Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 37/122 (30%), Positives = 67/122 (54%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 F + IA+S AA+ AEI R G+ +V +GQ EA LG T + ++LPQ ++ I+ Sbjct: 81 RFTAAIIAMSVNYAAYFAEIYRGGIESVSKGQYEAGKVLGFTRLQTFFRIVLPQVIKRIL 140 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 P ++ + L+K+++LA +G A+L V ++ + I + +F + I+ A+F Sbjct: 141 PATGNEVITLVKDTALAQVIGVAELFRVAQNAASREFSTMPIFVAGVFYFFMNWIVSAVF 200 Query: 385 MN 386 + Sbjct: 201 VR 202 >gi|307945341|ref|ZP_07660677.1| nopaline transport system permease protein NocQ [Roseibium sp. TrichSKD4] gi|307771214|gb|EFO30439.1| nopaline transport system permease protein NocQ [Roseibium sp. TrichSKD4] Length = 237 Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 36/125 (28%), Positives = 69/125 (55%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F++ +ALS +++ +E S +P+GQ E ALGL+H K RL+++PQ +R +P Sbjct: 104 FVAGVVALSFVFSSYASEAFLSAFRGIPQGQYEGGYALGLSHTKTMRLIIVPQLIRLALP 163 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 L + +L LLK+++L VG D++ G T + + +YL L+++ + + Sbjct: 164 ALGNLWLVLLKDTALVSVVGLEDILREVGVAARNTKEPFLFFGLACVLYLILAMISSAGL 223 Query: 386 NRLNA 390 +++ Sbjct: 224 SKIEG 228 >gi|262274651|ref|ZP_06052462.1| arginine/ornithine ABC transporter permease protein AotQ [Grimontia hollisae CIP 101886] gi|262221214|gb|EEY72528.1| arginine/ornithine ABC transporter permease protein AotQ [Grimontia hollisae CIP 101886] Length = 233 Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 55/218 (25%), Positives = 101/218 (46%), Gaps = 26/218 (11%) Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY---QL 244 ++ V S V+ ++L L T ++R + + + LY + ++ G+P LVL+ L + Q+ Sbjct: 20 ELAVLSAVIAVLLGL-VTAMARLSKNRVARGVATLY--STVVRGVPDLVLMLLIFFGAQI 76 Query: 245 -----------HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293 H++ V FN EF + + A++AE R +AV Sbjct: 77 MMNNISDWLYEHYEIDVF--FNI-------DEFTAGVSTIGFIFGAYMAETFRGAFLAVD 127 Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353 RGQ+EA A G++ R V+ PQ MR +P + + +L L+K ++L +G AD+ + Sbjct: 128 RGQLEAGTAYGMSPWMIFRRVMFPQMMRHALPGIGNNWLVLVKTTALVSVIGLADMTRLA 187 Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 + + + +YL ++ + L + RL K Sbjct: 188 KEAAGAVNEPFKFFIPVAIVYLLITSVSELGLKRLERK 225 >gi|91783384|ref|YP_558590.1| polar amino acid ABC transporter inner membrane protein [Burkholderia xenovorans LB400] gi|91687338|gb|ABE30538.1| amino acid ABC transporter membrane protein 2, PAAT family [Burkholderia xenovorans LB400] Length = 279 Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 47/130 (36%), Positives = 66/130 (50%), Gaps = 10/130 (7%) Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSP--EFMSLYIALSCYTAAFIAEIVRSGLIAV 292 + L A+ Y L F PV G V P F+ LS A +AE +R G+ A+ Sbjct: 122 IALYAMLYLLPFYVPVFG--------VVIPFSPFVKAVAGLSLPVTANVAEAMRGGIEAI 173 Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352 P GQ E+A ALG + R V++PQA+ I+P + + + L SSLAV G +D++SV Sbjct: 174 PSGQWESARALGYRKNQILRYVIVPQAIPFIMPNMMTVFAMLFIGSSLAVVTGTSDVLSV 233 Query: 353 GGTIINQTGQ 362 TI G Sbjct: 234 ANTITASDGS 243 >gi|329937972|ref|ZP_08287454.1| amino acid ABC transporter transmembrane protein [Streptomyces griseoaurantiacus M045] gi|329302929|gb|EGG46818.1| amino acid ABC transporter transmembrane protein [Streptomyces griseoaurantiacus M045] Length = 251 Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 39/122 (31%), Positives = 61/122 (50%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +AL A+ AEIVR L AV Q E +AL T + R +LLPQA+ +IPP ++ Sbjct: 88 LALGLTYGAYGAEIVRGALGAVDPAQREGGVALNFTPWQRMRKILLPQAVPEMIPPFSNL 147 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 + LLK ++L +G DL + ++ EI + IY ++ ++ M RL Sbjct: 148 LIELLKGTALVSVMGMGDLTFSAKLVRLALQESAEIYTYVLLIYFVIAFLLTRIMRRLER 207 Query: 391 KI 392 + Sbjct: 208 DL 209 >gi|329298495|ref|ZP_08255831.1| glutamine ABC transporter permease protein [Plautia stali symbiont] Length = 140 Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 30/81 (37%), Positives = 54/81 (66%) Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 + A+IAEI R ++++ +G EA++A+GL+ R V++P A+R +IP L +Q++ +K Sbjct: 55 SGAYIAEITRGAILSINKGFKEASLAMGLSQRATLWYVIMPLALRRMIPALGNQWIISIK 114 Query: 337 NSSLAVAVGFADLVSVGGTII 357 ++SL + +G A+L G II Sbjct: 115 DTSLFIVIGVAELTRQGQEII 135 >gi|260597266|ref|YP_003209837.1| arginine transporter permease subunit ArtQ [Cronobacter turicensis z3032] gi|260216443|emb|CBA29557.1| Arginine transport system permease protein artQ [Cronobacter turicensis z3032] Length = 238 Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 55/187 (29%), Positives = 94/187 (50%), Gaps = 10/187 (5%) Query: 217 KALPLLYISTFLIFGLPTLVLI---ALKYQLHFDK-PVLGQF-NFIGGSTVSPEFMSLYI 271 + LP + + F+ FG L+L L F PV Q NF VSP F+ I Sbjct: 55 RGLPEILVVLFIYFGSSQLLLTLSDGFTIPLGFASIPVQVQIDNF----DVSP-FLCGVI 109 Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 AL+ +A+ ++ +R L AVP GQ E+ ALGL+ +++PQ R +P L +Q+ Sbjct: 110 ALALLYSAYASQTLRGALKAVPHGQRESGQALGLSKSAIFFRLVMPQMWRHALPGLGNQW 169 Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 L LLK+++L + DL+ +I +T + +I IYL ++++ + R++ + Sbjct: 170 LVLLKDTALVSLISVNDLMLQTKSIATRTQEPFTWYIIAAAIYLVITLISQYILKRIDLR 229 Query: 392 IALKEKK 398 E++ Sbjct: 230 ATRFERR 236 >gi|254500334|ref|ZP_05112485.1| ABC transporter, permease protein, putative [Labrenzia alexandrii DFL-11] gi|222436405|gb|EEE43084.1| ABC transporter, permease protein, putative [Labrenzia alexandrii DFL-11] Length = 226 Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 49/160 (30%), Positives = 76/160 (47%), Gaps = 23/160 (14%) Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279 PL+ F+ FGLP L L YQ F L +ALS +A Sbjct: 70 PLIVQMFFVAFGLPLL----LGYQWPFWAHAL-------------------LALSLNFSA 106 Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339 + AEI+R+GL + GQ EAA ALGL +L PQA+ ++ P L SQ++ L + Sbjct: 107 YFAEILRAGLAGIGTGQSEAAAALGLPTWLGFSKILFPQAVAAMFPSLNSQFIFLFLTTG 166 Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379 + +G DL G I +++ ++ E+ IY+ +++ Sbjct: 167 VISEIGVTDLTWAGLYIDSRSFRSFEVFFTLTVIYVLMAL 206 >gi|239831829|ref|ZP_04680158.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium LMG 3301] gi|239824096|gb|EEQ95664.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium LMG 3301] Length = 240 Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 37/118 (31%), Positives = 66/118 (55%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +AL +++ +E+ S A+PRGQ E A+GL+H + R V+LPQ +R +P L + Sbjct: 109 VALGFVFSSYSSEVFLSAFRAIPRGQYEGGYAVGLSHWQTMRKVILPQLIRIALPGLANL 168 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388 +L LLK++SL + +D++ T + I +YL L+I+ + F++R+ Sbjct: 169 WLVLLKDTSLVSVITLSDILRQTSIAARVTKEPFLFFGIACLLYLVLAIISSYFIDRI 226 >gi|157803317|ref|YP_001491866.1| succinate dehydrogenase flavoprotein subunit [Rickettsia canadensis str. McKiel] gi|157784580|gb|ABV73081.1| succinate dehydrogenase flavoprotein subunit [Rickettsia canadensis str. McKiel] Length = 218 Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 44/166 (26%), Positives = 87/166 (52%), Gaps = 29/166 (17%) Query: 191 VFSFVLGIVLSL------FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244 +F V+G++L++ +A R +F+ + PLL + + F P +V +K+ + Sbjct: 31 IFGLVIGMLLAICKVNKNYALRFFANFYTSIFRGTPLLIQLSIIYFASPYIV--GIKFSV 88 Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304 F G+ I+ S + A+++E++R+G+ AV +GQ EAA AL Sbjct: 89 -----------FTAGA----------ISFSLNSGAYVSEVIRAGINAVDKGQFEAAEALA 127 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 + + ++LPQA+++I P L ++ ++L+K S++ +G DL+ Sbjct: 128 IPRYLIMQDIILPQAVKNIFPSLVNELVSLIKESAIISMLGEIDLM 173 >gi|325293914|ref|YP_004279778.1| nopaline ABC transporter membrane spanning protein [Agrobacterium sp. H13-3] gi|325061767|gb|ADY65458.1| nopaline ABC transporter membrane spanning protein [Agrobacterium sp. H13-3] Length = 228 Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 42/153 (27%), Positives = 81/153 (52%), Gaps = 5/153 (3%) Query: 251 LGQFNFIGGSTVSPEFMS-----LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305 LGQ FI G+ ++ +S +A++ TAA+ +EI+R GL++VP G EAA A G+ Sbjct: 76 LGQIGFIKGNAITWWVISDGARCAVMAMALNTAAYTSEILRGGLLSVPAGLKEAAKATGM 135 Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365 + R + P A+R +P ++ + ++K +SLA + ++ +++QT E Sbjct: 136 SPFMRFRRIEFPLAIRQALPAYGNELILVVKGTSLASTITVLEITGYAKRLMSQTFAIFE 195 Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 + + IYL +++ + + + L A + E + Sbjct: 196 VFALAGAIYLVINLTLVMLIRMLEAHLMRHEAR 228 >gi|197334943|ref|YP_002156403.1| membrane protein [Vibrio fischeri MJ11] gi|197316433|gb|ACH65880.1| membrane protein [Vibrio fischeri MJ11] Length = 246 Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 55/205 (26%), Positives = 95/205 (46%), Gaps = 29/205 (14%) Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKY---QLHFDKPVLGQFNFIG----GSTVSPEF 266 + +++ LY T ++ G+P LVL+ L + Q+ + + +I S E+ Sbjct: 45 RWARSIATLY--TTIVRGIPDLVLMMLLFFGGQMLLNNGLYASNEWINEWMTNSNPDHEW 102 Query: 267 MSL---YIALSCYTA----------AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313 +S YI +S + A A++AE R ++AV RG+MEAA A G++ A R Sbjct: 103 VSYLPDYIEISPFIAGVLTIGFIFGAYMAETFRGAIMAVDRGEMEAAKAYGMSGMMAFRR 162 Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI 373 +L PQ +R +P + +L LLK ++L +G D+V V T Sbjct: 163 ILFPQMIRHALPGFGNNWLVLLKTTALVSIIGLEDMVRVSSMAAGTTKMPFT-------F 215 Query: 374 YLSLSIMIALFMNRLNAKIALKEKK 398 Y++++ + LF + L E+K Sbjct: 216 YMTVACIFLLFTAVSTGALKLIERK 240 >gi|160936779|ref|ZP_02084145.1| hypothetical protein CLOBOL_01669 [Clostridium bolteae ATCC BAA-613] gi|158440271|gb|EDP18017.1| hypothetical protein CLOBOL_01669 [Clostridium bolteae ATCC BAA-613] Length = 219 Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 35/115 (30%), Positives = 68/115 (59%), Gaps = 1/115 (0%) Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 AA+ AEI RSG+ ++P GQ EAA LG + + ++LPQ ++ I+P +T++ + L+K+ Sbjct: 102 AAYFAEIYRSGIQSMPVGQYEAAQILGYSRFQTFFKIILPQVIKRILPSVTNEVITLVKD 161 Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 +SLA + A++ S+ + I + +F Y+ ++++A+ M + K+ Sbjct: 162 TSLAFTLSVAEMFSIAKALAASQTNMIPFVAAGLFYYI-FNLVVAVGMEWVEKKM 215 >gi|187477189|ref|YP_785213.1| amino acid ABC transporter permease [Bordetella avium 197N] gi|115421775|emb|CAJ48286.1| amino acid ABC transporter, permease protein [Bordetella avium 197N] Length = 222 Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 43/129 (33%), Positives = 72/129 (55%), Gaps = 15/129 (11%) Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLG-QFNFIGGSTVSPEFMSLYIALSCYTAAFI 281 YI F F P LVL+ L Y F P LG + + + ++ +A A++ Sbjct: 65 YIDFFRAF--PPLVLLILVY---FGWPFLGIELD---------KLTAVIVAFVLNNASYY 110 Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341 AE+ R+G+ AVP+GQMEAA + GL +A V++PQA+R+++P L + ++K +++A Sbjct: 111 AEVFRAGIEAVPKGQMEAARSTGLGRGQALGFVVIPQAVRNVLPDLVGNSIEVVKLTTIA 170 Query: 342 VAVGFADLV 350 V +L+ Sbjct: 171 SVVALPELL 179 >gi|222081098|ref|YP_002540461.1| amino acid ABC transporter [Agrobacterium radiobacter K84] gi|221725777|gb|ACM28866.1| amino acid ABC transporter [Agrobacterium radiobacter K84] Length = 222 Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 32/74 (43%), Positives = 49/74 (66%) Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 T+A+ AEI R+GL +V GQ EAA ALG+T R+ ++LPQA R +IP T++ + L K Sbjct: 102 TSAYCAEIWRAGLQSVASGQWEAASALGMTTRRTLARIILPQAARRMIPAFTNRGVELAK 161 Query: 337 NSSLAVAVGFADLV 350 +S+A + +L+ Sbjct: 162 MTSIASVITVQELM 175 Score = 43.9 bits (102), Expect = 0.043, Method: Compositional matrix adjust. Identities = 30/81 (37%), Positives = 42/81 (51%), Gaps = 7/81 (8%) Query: 96 TFW-LAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS--V 152 T W LAFSG A + G +G R S K + W+ Y+EVFRN P LV + + Y + V Sbjct: 26 TLWALAFSG---ALVAGLFLGLARASTVKWINWLATGYIEVFRNTPVLVQLIWFYYAFPV 82 Query: 153 LSVLPIPDHSIVLPFGMFLNN 173 L+ + + G+FLN Sbjct: 83 LTGWQMSSFTAA-ALGLFLNT 102 >gi|320546925|ref|ZP_08041227.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus equinus ATCC 9812] gi|320448443|gb|EFW89184.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus equinus ATCC 9812] Length = 226 Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 28/77 (36%), Positives = 51/77 (66%) Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 T ++EI+RS L+ V +GQ+EAA+A+GLT ++A ++ PQA++ +P L + +NL+K Sbjct: 108 TTGSLSEIIRSSLLTVNKGQLEAALAIGLTKKQAYLRIIFPQAIKQALPNLCNLVINLVK 167 Query: 337 NSSLAVAVGFADLVSVG 353 +SL + D+ ++ Sbjct: 168 GTSLVFVMTVKDITAIA 184 >gi|170289917|ref|YP_001736733.1| polar amino acid ABC transporter, inner membrane subunit [Candidatus Korarchaeum cryptofilum OPF8] gi|170173997|gb|ACB07050.1| polar amino acid ABC transporter, inner membrane subunit [Candidatus Korarchaeum cryptofilum OPF8] Length = 211 Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 33/116 (28%), Positives = 70/116 (60%) Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 ++A+I+E R ++++ GQ AA A+G+ + +++PQA+R +P ++++ + +++ Sbjct: 93 SSAYISEYFRGAILSIDEGQSLAAKAIGMNETQEFLHIIVPQAIRRALPSISNEIVYMVQ 152 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 SSLA AVG ++ SV + + + +EI I IYLS++ ++ L +L ++ Sbjct: 153 YSSLAFAVGVQEVYSVAKSFNSLYFRPLEIFSILALIYLSMTALVTLAFRKLTERL 208 >gi|121602131|ref|YP_988959.1| putative glutamate/aspartate ABC transporter, permease protein/periplasmic glutamate/aspartate-binding protein [Bartonella bacilliformis KC583] gi|120614308|gb|ABM44909.1| putative glutamate/aspartate ABC transporter, permease protein/periplasmic glutamate/aspartate-binding protein [Bartonella bacilliformis KC583] Length = 460 Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 29/58 (50%), Positives = 45/58 (77%) Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329 AL +T+A IAE VRSG+ ++P GQ AA+A+G T ++ R +++P+A+R+I+PPLTS Sbjct: 120 ALGFFTSARIAEQVRSGIESIPSGQRYAAMAIGFTTYQSYRYIMIPRAIRTILPPLTS 177 Score = 41.2 bits (95), Expect = 0.28, Method: Compositional matrix adjust. Identities = 28/79 (35%), Positives = 40/79 (50%), Gaps = 5/79 (6%) Query: 84 SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLV-----AWICRVYVEVFRN 138 +Y +L GF NT L+ S +I A +G ++G R N V I ++VE+ RN Sbjct: 28 TYLDTLLDGFKNTAVLSISSLILAVFVGVVIGTVRTLPNTSVINNTFRAIGGIWVEIMRN 87 Query: 139 IPPLVVIFFLYKSVLSVLP 157 IP LV +F Y V + P Sbjct: 88 IPLLVQVFLWYFVVPKIYP 106 >gi|27365437|ref|NP_760965.1| amino acid ABC transporter permease [Vibrio vulnificus CMCP6] gi|27361585|gb|AAO10492.1| Amino acid ABC transporter, permease protein [Vibrio vulnificus CMCP6] Length = 227 Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 53/187 (28%), Positives = 90/187 (48%), Gaps = 13/187 (6%) Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLL-YISTFLIFGLPTLVLIALKYQLHFDKPVLGQF 254 LGI + L R SR++ +LP YI F G P LV QL+ + QF Sbjct: 34 LGIAIPLAVARNSRNYV----VSLPAWGYIYFFR--GTPLLV------QLYLIYYGMDQF 81 Query: 255 NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLV 314 + + + +A T+A+ AEI+R + +P+G++EAA A G++H R + Sbjct: 82 FPVKDTLWENAWFCALVAFVLNTSAYTAEIIRGAINGLPKGEVEAAKAYGMSHWMTYRRI 141 Query: 315 LLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374 +LP A+R +P +++ + +L S++A V DL + ++ E L Y Sbjct: 142 VLPSALRRALPAYSNEVIFMLHGSAVAGIVTIIDLTGAARLVNSRYYAPFESFLTAGLFY 201 Query: 375 LSLSIMI 381 +SL+ +I Sbjct: 202 MSLTFLI 208 >gi|116049209|ref|YP_791988.1| ABC transporter permease [Pseudomonas aeruginosa UCBPP-PA14] gi|254234384|ref|ZP_04927707.1| hypothetical protein PACG_00227 [Pseudomonas aeruginosa C3719] gi|254239633|ref|ZP_04932955.1| hypothetical protein PA2G_00250 [Pseudomonas aeruginosa 2192] gi|296390364|ref|ZP_06879839.1| ABC transporter permease [Pseudomonas aeruginosa PAb1] gi|115584430|gb|ABJ10445.1| putative amino acid ABC transporter permease [Pseudomonas aeruginosa UCBPP-PA14] gi|126166315|gb|EAZ51826.1| hypothetical protein PACG_00227 [Pseudomonas aeruginosa C3719] gi|126193011|gb|EAZ57074.1| hypothetical protein PA2G_00250 [Pseudomonas aeruginosa 2192] Length = 214 Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 36/128 (28%), Positives = 73/128 (57%), Gaps = 4/128 (3%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + L Y AA+ E+VR G+++VP AA +LGL++R+ ++LP A R P + Sbjct: 91 LVLGVYAAAYCTEVVRGGVLSVPPSVRRAARSLGLSYRQDLFHIVLPMAARVAFPGWVNL 150 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 L+++K++SL + +G +L+ TI+ + + + ++ I +Y +S ++A RL A Sbjct: 151 TLSVMKDTSLVLWIGIVELLRASQTIVTRIQEPLFVLCIAGLVYYLMSWVVA----RLGA 206 Query: 391 KIALKEKK 398 ++ + ++ Sbjct: 207 RLERRWQQ 214 >gi|22536879|ref|NP_687730.1| amino acid ABC transporter, permease protein [Streptococcus agalactiae 2603V/R] gi|76786730|ref|YP_329463.1| polar amino acid ABC transporter permease [Streptococcus agalactiae A909] gi|76798200|ref|ZP_00780451.1| amino acid ABC transporter, permease protein [Streptococcus agalactiae 18RS21] gi|22533729|gb|AAM99602.1|AE014224_5 amino acid ABC transporter, permease protein [Streptococcus agalactiae 2603V/R] gi|76561787|gb|ABA44371.1| polar amino acid uptake (PAAT) family ABC transporter, permease protein [Streptococcus agalactiae A909] gi|76586463|gb|EAO62970.1| amino acid ABC transporter, permease protein [Streptococcus agalactiae 18RS21] Length = 216 Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 26/73 (35%), Positives = 50/73 (68%) Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 + + +T+A +AEI+R GL V +GQ EA ++ G T+ + +++ PQA R ++P + SQ+ Sbjct: 87 SFTIFTSAALAEIIRGGLNGVDKGQTEAGLSQGFTYLQVFIIIIFPQAFRKMLPAIISQF 146 Query: 332 LNLLKNSSLAVAV 344 + ++K++SL +V Sbjct: 147 VTVIKDTSLLYSV 159 Score = 37.0 bits (84), Expect = 5.1, Method: Compositional matrix adjust. Identities = 20/61 (32%), Positives = 35/61 (57%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +L GF T +++F ++ + GTL+ R S N + I +Y+E RN+P L+ IF + Sbjct: 13 LLQGFGLTLYISFISILLSMFFGTLLAIMRNSKNPIWKLIASIYIEFVRNVPNLLWIFII 72 Query: 149 Y 149 + Sbjct: 73 F 73 >gi|331266483|ref|YP_004326113.1| ABC transporter membrane-spanning permease-amino acid transport [Streptococcus oralis Uo5] gi|326683155|emb|CBZ00773.1| ABC transporter membrane-spanning permease-amino acid transport [Streptococcus oralis Uo5] Length = 213 Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 60/217 (27%), Positives = 107/217 (49%), Gaps = 29/217 (13%) Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF---GLPTLV 236 ++T+ A + +FS LGIV++ FA ++ PL Y+ I+ G P L+ Sbjct: 16 SMTLQVFALVLIFSIPLGIVVA-FALQVRWK---------PLHYLIDLYIWVMRGTPLLL 65 Query: 237 -LIALKYQLHFDKPVLG-QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294 LI + Y L P +G + + + + IA AA+ AEI R G+ +P+ Sbjct: 66 QLIFIYYVL----PSIGIRLDRLPAAV---------IAFVLNYAAYFAEIFRGGIETIPK 112 Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354 GQ EAA L + R ++LPQ + ++P + ++ ++L+K++SL A+G +DL+ Sbjct: 113 GQYEAAKVLKFSPFSTVRYIILPQVTKIVLPSVFNEIMSLVKDTSLVYALGISDLILASR 172 Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 T N+ + + L IYL + ++ + +L K Sbjct: 173 TAANRDASLVPMFLAGA-IYLIMIGLVTIVAKKLEKK 208 >gi|311108430|ref|YP_003981283.1| L-cystine transporter permease TcyB [Achromobacter xylosoxidans A8] gi|310763119|gb|ADP18568.1| L-cystine transport system permease protein TcyB [Achromobacter xylosoxidans A8] Length = 249 Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 55/199 (27%), Positives = 96/199 (48%), Gaps = 14/199 (7%) Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252 SF LG+ L+ F L R F AL Y+ +LI G P LV + + + + P +G Sbjct: 53 SFALGLALA-FVVALIRLFGPAPLVALVRFYV--WLIRGTPLLVQL---FVIFYGLPSVG 106 Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312 V + I + A+ +E++R + ++ +GQ EAA +L +T +A R Sbjct: 107 --------IVLDPLPAALIGFTLNVGAYNSEVIRGAIESITKGQWEAAYSLSMTRAQALR 158 Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372 +LPQA R +PPL++ ++ L+K++SLA + ++ I T + + + Sbjct: 159 RTILPQAARVAVPPLSNSFIALVKDTSLAAVLTVPEIFQAAQRIAAVTYEPLILYTEAAL 218 Query: 373 IYLSLSIMIALFMNRLNAK 391 IYL S +++ RL + Sbjct: 219 IYLVFSSVLSAAQVRLERR 237 >gi|257056921|ref|YP_003134753.1| amino acid ABC transporter membrane protein [Saccharomonospora viridis DSM 43017] gi|256586793|gb|ACU97926.1| amino acid ABC transporter membrane protein [Saccharomonospora viridis DSM 43017] Length = 236 Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 46/156 (29%), Positives = 79/156 (50%), Gaps = 9/156 (5%) Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301 + ++F P+L F + P + + + L A+ AEIVR + AVP+ Q E A+ Sbjct: 69 FWIYFVLPILTGFQLL------PLWAGI-VVLGLNFGAYGAEIVRGAVQAVPKEQHEGAV 121 Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII--NQ 359 AL + + R V+LPQA+ ++PP + ++ LLK +SL + ++ ++ Sbjct: 122 ALNFSTSQRLRRVILPQALVEMMPPFNNLFIQLLKGTSLLTFITVPEMTHQAQVVLVPAY 181 Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395 TG+ I I + YL +SI+I L M L ++K Sbjct: 182 TGEVALIFSILLVFYLLVSIVITLVMRGLERWASVK 217 >gi|162149590|ref|YP_001604051.1| putative transport protein [Gluconacetobacter diazotrophicus PAl 5] gi|161788167|emb|CAP57772.1| putative transport protein [Gluconacetobacter diazotrophicus PAl 5] Length = 538 Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 36/93 (38%), Positives = 59/93 (63%), Gaps = 2/93 (2%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F++ +I+LS AA+ EI R+ L A+ GQ A ALG+T + R V+ PQA+R +P Sbjct: 401 FLAAWISLSINEAAYQVEINRAALQAIDPGQALAGDALGMTRMQVYRHVIFPQALRIALP 460 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN 358 P +++++L+K +SLA + +L++V T IN Sbjct: 461 PTINEFISLIKTTSLASVISLQELLAV--TQIN 491 >gi|170016650|ref|YP_001727569.1| amino acid ABC transporter permease [Leuconostoc citreum KM20] gi|169803507|gb|ACA82125.1| Amino acid ABC transporter, permease protein [Leuconostoc citreum KM20] Length = 232 Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 34/121 (28%), Positives = 72/121 (59%), Gaps = 3/121 (2%) Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333 S T A+ AE +R+ + +VP Q EAA +LG++ + R ++LPQA R IPPL++ ++ Sbjct: 109 SLNTGAYAAESIRAAITSVPAVQKEAAESLGMSPFQVYRHIILPQAARISIPPLSNSLIS 168 Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL---FMNRLNA 390 LLK++SLA + ++ + I + + + + L+ +Y +++ ++++ ++ R + Sbjct: 169 LLKDTSLASVITIVEMFYLSQQIAAENYKILSMYLLVALVYAAMTTILSIGQHYLERYTS 228 Query: 391 K 391 + Sbjct: 229 R 229 >gi|49081868|gb|AAT50334.1| PA0889 [synthetic construct] Length = 230 Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 42/125 (33%), Positives = 70/125 (56%), Gaps = 9/125 (7%) Query: 231 GLPTLVLIALKYQ-----LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285 G+P LVLI L + L++ P LG ++I ++P F+S L A+++E Sbjct: 58 GIPDLVLILLIFYGGQGLLNWVAPQLGYDDYI---DLNP-FVSGVGTLGFIFGAYLSETF 113 Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345 R +A+P+GQ EA A G++HR+ + +PQ +R IP T+ +L L+K ++L VG Sbjct: 114 RGVFMAIPKGQGEAGYAYGMSHRQVFFRIQVPQMIRLAIPGFTNNWLVLVKATALISVVG 173 Query: 346 FADLV 350 D++ Sbjct: 174 LQDMM 178 >gi|239834533|ref|ZP_04682861.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium LMG 3301] gi|239822596|gb|EEQ94165.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium LMG 3301] Length = 216 Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 47/152 (30%), Positives = 80/152 (52%), Gaps = 11/152 (7%) Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290 G+P LV + L Y L PV+G N P ++ + + ++A+++EI R +I Sbjct: 63 GVPLLVQLLLCYYLL---PVIG-INV-------PALVAAVVTVGICSSAYVSEIWRGAII 111 Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 A+P GQ EAA A+G+ R ++LPQA R +P L ++ + L+K SSL VG ++ Sbjct: 112 ALPPGQAEAATAIGMGPRDIWTRIILPQAARLSLPALVNEMILLVKASSLVSVVGILEVT 171 Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382 T + +E+ + IYL +++ +A Sbjct: 172 RASQAQAATTFRPLEVYVAAACIYLLINLCLA 203 >gi|227113605|ref|ZP_03827261.1| putative amino acid ABC transporter, permease protein [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 218 Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 37/108 (34%), Positives = 61/108 (56%), Gaps = 1/108 (0%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G VSP + + +AL+ +T+AF+ +I + A+P+GQ EA+ LGL + V+ PQ Sbjct: 80 GIDVSP-WTAAALALTLFTSAFLVDIWCGSVEALPKGQWEASRCLGLDFGQTLYRVIAPQ 138 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 AMR I P + ++K ++LA +GF +L G + N T Q ++ Sbjct: 139 AMRIAIAPTVGFSVQVIKGTALASIIGFIELTKAGTMLNNVTYQPFKV 186 >gi|86357101|ref|YP_468993.1| amino acid ABC transporter permease [Rhizobium etli CFN 42] gi|86281203|gb|ABC90266.1| probable amino acid ABC transporter, permease protein [Rhizobium etli CFN 42] Length = 260 Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 47/161 (29%), Positives = 78/161 (48%), Gaps = 10/161 (6%) Query: 233 PTLVLI-ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291 P LVLI A Y F+ V G + P+++ I L+ +A++AEI R +++ Sbjct: 97 PHLVLIFATTYIFPFEIVVFGNY------LPFPDWLKAVIGLAIPASAYVAEITRGAILS 150 Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 +P Q EAA LG + +A R ++LPQ +R +PP + ++ +SLA VG +L+ Sbjct: 151 IPTTQWEAAKGLGFSRSQALRWIILPQCLRRSLPPWMNILASITMGTSLASLVGVHELLH 210 Query: 352 V---GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 T + + I ++ M + +L IA RL Sbjct: 211 AATDASTAVRRLDFTIIAYIVVMAAFFTLCYPIARLTRRLE 251 Score = 37.0 bits (84), Expect = 5.6, Method: Compositional matrix adjust. Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 7/76 (9%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIF----- 146 GF+ ++ S M T++GT+ G +L + V + YV+ FRN P LV+IF Sbjct: 49 GFLMNVVISLSAMTLGTVVGTIFGILQLMPYRPVRYPVVAYVQAFRNAPHLVLIFATTYI 108 Query: 147 FLYKSVL--SVLPIPD 160 F ++ V+ + LP PD Sbjct: 109 FPFEIVVFGNYLPFPD 124 >gi|315613064|ref|ZP_07887975.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis ATCC 49296] gi|315315174|gb|EFU63215.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis ATCC 49296] Length = 213 Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 60/217 (27%), Positives = 107/217 (49%), Gaps = 29/217 (13%) Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF---GLPTLV 236 ++T+ A + +FS LGIV++ FA ++ PL Y+ I+ G P L+ Sbjct: 16 SMTLQVFALVLIFSIPLGIVVA-FALQVRWK---------PLHYLIDLYIWVMRGTPLLL 65 Query: 237 -LIALKYQLHFDKPVLG-QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294 LI + Y L P +G + + + + IA AA+ AEI R G+ +P+ Sbjct: 66 QLIFIYYVL----PSIGIRLDRLPAAV---------IAFVLNYAAYFAEIFRGGIETIPK 112 Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354 GQ EAA L + R ++LPQ + ++P + ++ ++L+K++SL A+G +DL+ Sbjct: 113 GQYEAAKVLKFSPFDTVRYIILPQVTKIVLPSVFNEIMSLVKDTSLVYALGISDLILASR 172 Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 T N+ + + L IYL + ++ + +L K Sbjct: 173 TAANRDASLVPMFLAGA-IYLIMIGIVTIVAKKLEKK 208 >gi|260461091|ref|ZP_05809340.1| polar amino acid ABC transporter, inner membrane subunit [Mesorhizobium opportunistum WSM2075] gi|259033125|gb|EEW34387.1| polar amino acid ABC transporter, inner membrane subunit [Mesorhizobium opportunistum WSM2075] Length = 218 Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 49/148 (33%), Positives = 80/148 (54%), Gaps = 7/148 (4%) Query: 238 IALKYQLHFDKPVLGQ--FNFIG----GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291 IA ++ + P L Q F F G G + P ++ +A++ AA+ EIV +GL A Sbjct: 53 IACYVEVMRNTPFLVQLFFIFFGLPSLGIRLDP-ILAAMLAMTLNMAAYTIEIVGAGLDA 111 Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 VP GQ EAA+ALGL R+ ++LPQA++ I P LTSQ + ++ S++ + +L Sbjct: 112 VPGGQTEAALALGLRPRQVFIKIVLPQALKIIYPALTSQIVIMMLESAVVSQIAVRELTY 171 Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSI 379 + +T ++ E + +YL LS+ Sbjct: 172 EADMLQARTFRSFETYFVVTLVYLLLSM 199 >gi|239620787|ref|ZP_04663818.1| permease protein of ABC transporter system [Bifidobacterium longum subsp. infantis CCUG 52486] gi|239516363|gb|EEQ56230.1| permease protein of ABC transporter system [Bifidobacterium longum subsp. infantis CCUG 52486] Length = 264 Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 50/178 (28%), Positives = 81/178 (45%), Gaps = 24/178 (13%) Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279 PLL FL FGLP L ++ + + F+GGS Sbjct: 111 PLLVQLYFLYFGLPKLGVV-----WSAETCAIVGLGFLGGS------------------- 146 Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339 ++AE +R GL AVP Q E A LGLT + V+LPQA+ + IP + + + L K SS Sbjct: 147 YMAEAMRGGLEAVPNVQRETAYVLGLTSTQTITRVILPQAVSTAIPGVVANVIFLFKESS 206 Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 + A+ AD++ + +I E + + + YL + + I++F L + + + Sbjct: 207 VVSAIALADVMYMAKDLIGMYYSTYESLFMLVVAYLVILLPISIFGTWLERRFDYERR 264 Score = 38.5 bits (88), Expect = 2.1, Method: Compositional matrix adjust. Identities = 29/111 (26%), Positives = 47/111 (42%), Gaps = 19/111 (17%) Query: 43 WCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVN----TFW 98 W VY +K E +G P T D S+ FVN T + Sbjct: 25 WVAKTVYAQEKKR---------------EAKEGARPMTFDWSFVQRYAPFFVNGTLMTLF 69 Query: 99 LAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 ++ G++ A +G + ++ + I R+Y+E+ RN P LV ++FLY Sbjct: 70 ISVFGILLAIAVGLVCAGVEIARIPVARQIVRIYIELSRNTPLLVQLYFLY 120 >gi|152996347|ref|YP_001341182.1| ectoine/hydroxyectoine ABC transporter permease EhuC [Marinomonas sp. MWYL1] gi|150837271|gb|ABR71247.1| Ectoine/hydroxyectoine ABC transporter permease protein EhuC [Marinomonas sp. MWYL1] Length = 220 Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 35/123 (28%), Positives = 65/123 (52%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +AL ++ E+VR + +VP+GQ EA+IAL T + +++PQA+ ++IPP + Sbjct: 88 VALGLNIGSYGTEVVRGAIQSVPKGQYEASIALNFTSSQRLWRIIMPQALVNMIPPFGNL 147 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 + L+K +SL + DL + + T Q EI + + Y ++ + F+ RL Sbjct: 148 AIELVKATSLVSLITIGDLTFKAKMLADTTLQVGEIFGVVLLFYFVMAQFLVFFIRRLET 207 Query: 391 KIA 393 ++ Sbjct: 208 HLS 210 >gi|77405937|ref|ZP_00783017.1| amino acid ABC transporter, permease protein [Streptococcus agalactiae H36B] gi|77175448|gb|EAO78237.1| amino acid ABC transporter, permease protein [Streptococcus agalactiae H36B] Length = 216 Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 26/73 (35%), Positives = 50/73 (68%) Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 + + +T+A +AEI+R GL V +GQ EA ++ G T+ + +++ PQA R ++P + SQ+ Sbjct: 87 SFTIFTSAALAEIIRGGLNGVDKGQTEAGLSQGFTYLQVFIIIIFPQAFRKMLPAIISQF 146 Query: 332 LNLLKNSSLAVAV 344 + ++K++SL +V Sbjct: 147 VTVIKDTSLLYSV 159 Score = 36.2 bits (82), Expect = 8.9, Method: Compositional matrix adjust. Identities = 20/58 (34%), Positives = 33/58 (56%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIF 146 +L GF T +++F ++ + GTL+ R S N + I +Y+E RN+P L+ IF Sbjct: 13 LLQGFGLTLYISFISILLSMFFGTLLAIMRNSKNPIWKLIASIYIEFVRNVPNLLWIF 70 >gi|212716829|ref|ZP_03324957.1| hypothetical protein BIFCAT_01772 [Bifidobacterium catenulatum DSM 16992] gi|212660114|gb|EEB20689.1| hypothetical protein BIFCAT_01772 [Bifidobacterium catenulatum DSM 16992] Length = 218 Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 50/178 (28%), Positives = 85/178 (47%), Gaps = 24/178 (13%) Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279 PLL FL FGLP L ++ Q ++G F+GGS Sbjct: 65 PLLVQLYFLYFGLPKLGIVWSAEQC----AIVG-LGFLGGS------------------- 100 Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339 ++AE +R GL +P Q E+A LGL+ + V++PQA+ + IP + + + L+K SS Sbjct: 101 YMAEAMRGGLETIPNVQRESAYVLGLSQWQTLSRVVIPQAISTSIPGVVANVIFLIKESS 160 Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 + A+ AD++ + +I E +L+ + YL + + I+LF L + + + Sbjct: 161 VVSAIALADVMYMAKDLIGMYYSTYESLLMLVVAYLVILLPISLFGTWLERRFDYERR 218 >gi|54288386|gb|AAV31674.1| predicted abc-type amino acid transport system permease component [uncultured alpha proteobacterium EBAC2C11] Length = 227 Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 40/123 (32%), Positives = 66/123 (53%), Gaps = 3/123 (2%) Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 AL +TAA++AE+ R + +V +GQ EA+ AL + + R V+ PQA++ I P Sbjct: 100 ALVLFTAAYLAEVWRGAVESVAKGQWEASYALNIKYSLLLRKVIFPQAIKFGIAPTVGFM 159 Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW---MFIYLSLSIMIALFMNRL 388 + ++K +SLA +GF DL+ G N E +++ +Y + +ALF +L Sbjct: 160 VQIIKGTSLAYIIGFNDLMLAGKRWANAPVPGSEPFVVFPLMAVMYFCICYPLALFARKL 219 Query: 389 NAK 391 AK Sbjct: 220 EAK 222 >gi|92114719|ref|YP_574647.1| amino acid ABC transporter permease [Chromohalobacter salexigens DSM 3043] gi|91797809|gb|ABE59948.1| amino acid ABC transporter membrane protein, PAAT family [Chromohalobacter salexigens DSM 3043] Length = 243 Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 52/167 (31%), Positives = 87/167 (52%), Gaps = 23/167 (13%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF-IGGSTVSPEFMSLYIALSC 275 AL +L+IS F G P LV + L Y + P L F I G T + + L+ Sbjct: 72 NALAMLFISFFR--GTPLLVQLFLFY---YGLPQLLTFLVAINGITAT------ILGLTL 120 Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335 + +A++AE +R+ ++ V R Q EAA+++G+T + R ++LPQA R P L + +++++ Sbjct: 121 HFSAYMAESIRAAIVGVDRSQTEAALSIGMTQGQLMRRIVLPQATRVATPTLMNYFIDMI 180 Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382 K +SLA +G +L +G T G F+Y +M+A Sbjct: 181 KATSLAFTLGVTEL--MGATQKEAAGS---------FLYFEAFLMVA 216 >gi|70729727|ref|YP_259466.1| amino acid ABC transporter permease [Pseudomonas fluorescens Pf-5] gi|68344026|gb|AAY91632.1| amino acid ABC transporter, permease protein [Pseudomonas fluorescens Pf-5] Length = 215 Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 56/192 (29%), Positives = 92/192 (47%), Gaps = 16/192 (8%) Query: 204 ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVS 263 A RLS F + L +YIS F G P LV + L L+F P +G + Sbjct: 40 AARLSGFFLLR---CLARVYISVFR--GTPCLVQLFL---LYFGGPQIGL-------ELE 84 Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P F + I L AA++AE +R + V GQ+EAA ++G + L+ LPQ + + Sbjct: 85 P-FSAGVIGLGLNIAAYMAESIRGAISNVDPGQVEAARSIGFGKGQTLWLITLPQTAKLM 143 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 I PL + L+K S+L + +L I+ T + EI ++ +Y+++ + L Sbjct: 144 IRPLGVNAVALIKGSALVSTISVVELSYTAQRFISSTYKPFEIFMVSAILYIAMVYTVRL 203 Query: 384 FMNRLNAKIALK 395 ++ L+ + A K Sbjct: 204 LVDHLDKRFAAK 215 >gi|319762273|ref|YP_004126210.1| polar amino acid abc transporter, inner membrane subunit [Alicycliphilus denitrificans BC] gi|317116834|gb|ADU99322.1| polar amino acid ABC transporter, inner membrane subunit [Alicycliphilus denitrificans BC] Length = 220 Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 41/126 (32%), Positives = 72/126 (57%), Gaps = 4/126 (3%) Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328 L +AL C +AF A+ +RSG+ +P Q+EAA++LGL + V+LPQA+R+++ P+T Sbjct: 93 LTLALVC--SAFTADYLRSGINTIPGSQIEAALSLGLRPMRIISAVVLPQALRAVVQPMT 150 Query: 329 SQYLNLLKNSSLAVAVGFA--DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386 S + L+ ++SLA V F +L ++ I + I + +Y++ ++IA Sbjct: 151 SLLIALMLSTSLASQVPFPGRELTALVSKIATDSAAGIPAFAVAAAMYVATGLLIAWAGA 210 Query: 387 RLNAKI 392 L K+ Sbjct: 211 ALEKKV 216 >gi|110668633|ref|YP_658444.1| ABC-type glutamine/glutamate/polar amino acids transport system, permease protein [Haloquadratum walsbyi DSM 16790] gi|109626380|emb|CAJ52839.1| ABC-type glutamine/glutamate/polar amino acids transport system, permease protein [Haloquadratum walsbyi DSM 16790] Length = 284 Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 36/121 (29%), Positives = 69/121 (57%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 ++L+ AA++ E VR G+ AVP GQMEAA +LG+ + +A R V++PQA R+ + + + Sbjct: 155 LSLTLNHAAYVGEAVRGGIGAVPDGQMEAARSLGMGYVQAMREVVIPQAWRNALAAIGND 214 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 + L+K++SL + +L+ + + T +L+ YLS+++ + + L Sbjct: 215 QIILVKDTSLLTVIAIPELIQQFRDVNSATFDPWTPLLLVAIAYLSITVPMGRLVEYLET 274 Query: 391 K 391 + Sbjct: 275 R 275 >gi|331695544|ref|YP_004331783.1| ectoine/hydroxyectoine ABC transporter permease EhuD [Pseudonocardia dioxanivorans CB1190] gi|326950233|gb|AEA23930.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD [Pseudonocardia dioxanivorans CB1190] Length = 218 Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 32/95 (33%), Positives = 56/95 (58%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +AL + A + +E+ R+G+ AVPRGQ EAA AL L + V+LPQA+ ++P L + Sbjct: 94 LALGVHYATYTSEVYRAGIDAVPRGQWEAATALSLPTTRVWTGVVLPQAIPRVLPALGNY 153 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365 +++ K + L + +G D+V + Q+ + +E Sbjct: 154 VISMFKETPLLIGIGVLDIVGQAREVGGQSFRYVE 188 >gi|50122414|ref|YP_051581.1| putative amino acid ABC transporter permease [Pectobacterium atrosepticum SCRI1043] gi|261822705|ref|YP_003260811.1| polar amino acid ABC transporter inner membrane protein [Pectobacterium wasabiae WPP163] gi|49612940|emb|CAG76391.1| putative amino acid ABC transporter, permease protein [Pectobacterium atrosepticum SCRI1043] gi|261606718|gb|ACX89204.1| polar amino acid ABC transporter, inner membrane subunit [Pectobacterium wasabiae WPP163] Length = 217 Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 37/108 (34%), Positives = 61/108 (56%), Gaps = 1/108 (0%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G VSP + + +AL+ +T+AF+ +I + A+P+GQ EA+ LGL + V+ PQ Sbjct: 79 GIDVSP-WTAAALALTLFTSAFLVDIWCGSVEALPKGQWEASRCLGLDFGQTLYRVIAPQ 137 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 AMR I P + ++K ++LA +GF +L G + N T Q ++ Sbjct: 138 AMRIAIAPTVGFSVQVIKGTALASIIGFIELTKAGTMLNNVTYQPFKV 185 >gi|302336124|ref|YP_003801331.1| polar amino acid ABC transporter, inner membrane subunit [Olsenella uli DSM 7084] gi|301319964|gb|ADK68451.1| polar amino acid ABC transporter, inner membrane subunit [Olsenella uli DSM 7084] Length = 748 Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 28/74 (37%), Positives = 52/74 (70%) Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 ++A++AEI R+G+ ++P+GQ EAA +LG+ + ++LPQ +R +IP +TS ++ K Sbjct: 568 SSAYLAEIFRAGIQSIPQGQYEAAASLGMNRAQTMLSIILPQTVRRVIPTVTSDFITSYK 627 Query: 337 NSSLAVAVGFADLV 350 ++SL +VG +L+ Sbjct: 628 DTSLLSSVGVMELM 641 >gi|238750305|ref|ZP_04611807.1| ABC-type amino acid transport system permease component [Yersinia rohdei ATCC 43380] gi|238711538|gb|EEQ03754.1| ABC-type amino acid transport system permease component [Yersinia rohdei ATCC 43380] Length = 249 Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 40/129 (31%), Positives = 76/129 (58%), Gaps = 1/129 (0%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 PE ++ AL+ AA++A V++G++A+ GQ +A ++LG + V+LPQA+R + Sbjct: 94 PEITTVVCALALIAAAYLAHAVKAGIVAIGAGQWQAGLSLGFNRWQVLWFVVLPQALRMM 153 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG-QAIEIILIWMFIYLSLSIMIA 382 +P +Q+++L+K++SLA VG +L + + N++ +E+ L IY L + + Sbjct: 154 VPSFINQWISLIKDTSLAYIVGVNELTFLATQVNNRSMVYPMEVFLFVALIYFVLCLALD 213 Query: 383 LFMNRLNAK 391 + N LN + Sbjct: 214 VLANGLNRR 222 >gi|152978298|ref|YP_001343927.1| arginine transporter permease subunit ArtQ [Actinobacillus succinogenes 130Z] gi|150840021|gb|ABR73992.1| polar amino acid ABC transporter, inner membrane subunit [Actinobacillus succinogenes 130Z] Length = 223 Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 53/217 (24%), Positives = 99/217 (45%), Gaps = 27/217 (12%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 V S ++G++LS+F L K + ++ L+ GLP ++++ L Y Sbjct: 21 VSSLIVGLILSMFFVMLETSKFACIRKPVS---VAITLLRGLPEIIVVLLIY-------- 69 Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYT----------AAFIAEIVRSGLIAVPRGQMEAA 300 G + V + Y+ S ++ AA+ ++ +R + A+ GQ E+ Sbjct: 70 ------FGSTEVVEKLTGEYVEFSAFSCGVAALSLIFAAYASQSLRGAIQAISLGQWESG 123 Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 ALGL+ ++LPQ R +P L++Q+L LLK+++L +G D++ I T Sbjct: 124 AALGLSRGYTFMHIILPQMWRHALPGLSNQWLVLLKDTALVSLIGVNDIMRQTDLINTNT 183 Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 Q IYL ++++ +F+ RL + E+ Sbjct: 184 HQPFTWYGFAALIYLVITLISQVFIRRLEQRFTRFER 220 >gi|317404628|gb|EFV85028.1| amino-acid ABC transporter [Achromobacter xylosoxidans C54] Length = 249 Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 55/199 (27%), Positives = 96/199 (48%), Gaps = 14/199 (7%) Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252 SF LG+ L+ F L R F AL Y+ +LI G P LV + + + + P +G Sbjct: 53 SFALGLALA-FVVALIRLFGPAPLVALVRFYV--WLIRGTPLLVQL---FVIFYGLPSVG 106 Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312 V + I + A+ +E++R + ++ +GQ EAA +L +T +A R Sbjct: 107 --------VVLDPLPAALIGFTLNVGAYNSEVIRGAIESISKGQWEAAYSLSMTRGQALR 158 Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372 +LPQA R +PPL++ ++ L+K++SLA + ++ I T + + + Sbjct: 159 RTVLPQAARVAVPPLSNSFIALVKDTSLAAVLTVPEIFQAAQRIAAVTYEPLILYTEAAL 218 Query: 373 IYLSLSIMIALFMNRLNAK 391 IYL S +++ RL + Sbjct: 219 IYLVFSSVLSAAQVRLERR 237 >gi|268319379|ref|YP_003293035.1| ABC transporter permease component [Lactobacillus johnsonii FI9785] gi|262397754|emb|CAX66768.1| ABC transporter permease component [Lactobacillus johnsonii FI9785] Length = 225 Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 59/213 (27%), Positives = 108/213 (50%), Gaps = 20/213 (9%) Query: 185 TNAKIFVFSFVLGIVL-SLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243 T+ I V S ++G+ L +LF + R + K + +Y+ F + +PT+VL+ L Y Sbjct: 24 TSVWIAVLSLIIGLALGALFG--VLRTSKSRLVKVIFRIYLEFFRM--VPTVVLLFLFYY 79 Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 + + QFN ++V IA + + +A ++IVR LI+VP+ Q E+ +AL Sbjct: 80 I-----LPRQFNLNWPASVMA-----VIAFALWVSAEFSDIVRGALISVPKIQRESGLAL 129 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363 GL + VLLPQA + +P + ++K +SL + + D+++VG I+ Q Sbjct: 130 GLNKWQLFIYVLLPQAFQLELPATINLATRVIKTTSLLMMISVMDVINVGQQIVEANNQT 189 Query: 364 IEIILIWM-----FIYLSLSIMIALFMNRLNAK 391 + W+ F+Y + ++L+ RL+ + Sbjct: 190 NPNGVFWVYGLIFFLYFIVDYPLSLWAKRLSKR 222 Score = 43.5 bits (101), Expect = 0.062, Method: Compositional matrix adjust. Identities = 23/63 (36%), Positives = 36/63 (57%) Query: 87 TAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIF 146 T +L G + W+A +I +G L G R S ++LV I R+Y+E FR +P +V++F Sbjct: 16 TRLLGGLWTSVWIAVLSLIIGLALGALFGVLRTSKSRLVKVIFRIYLEFFRMVPTVVLLF 75 Query: 147 FLY 149 Y Sbjct: 76 LFY 78 >gi|218659590|ref|ZP_03515520.1| octopine ABC transporter, permease protein [Rhizobium etli IE4771] Length = 241 Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 58/221 (26%), Positives = 105/221 (47%), Gaps = 16/221 (7%) Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235 L+ +T+ + F+ V+G +++ +LSRH + L T ++ G+P L Sbjct: 23 LTAAAMTIGVSVCGFLAGTVIGTMITFM--QLSRHMAIRW-----LADCYTTVLRGVPDL 75 Query: 236 VLIALKYQ-----LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290 ++I L Y L + G FIG P F++ +AL +AA+ AE+ R Sbjct: 76 LVIYLFYFGGSAFLGSLGGLFGYQGFIG----MPAFLTGTLALGVVSAAYQAEVFRGAYR 131 Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 +V RG++EAA A+G+ R ++ P +R IP L + + +LK S+L G +L+ Sbjct: 132 SVARGEIEAASAVGMRRWPKFRRIVAPLVLRYAIPGLGNTWQLVLKESALVSVTGLVELL 191 Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 T + E L+ + +YL ++ ++ R+ A+ Sbjct: 192 RQSQIAAGSTRRPFEFYLMAVVLYLVITWFSSILFRRMEAR 232 Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust. Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 13/73 (17%) Query: 90 LVGFVNTFW-------------LAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136 +VGF T W ++ G + T+IGT++ +LS + + W+ Y V Sbjct: 10 IVGFGQTGWGWLLLTAAAMTIGVSVCGFLAGTVIGTMITFMQLSRHMAIRWLADCYTTVL 69 Query: 137 RNIPPLVVIFFLY 149 R +P L+VI+ Y Sbjct: 70 RGVPDLLVIYLFY 82 >gi|116248726|ref|YP_764567.1| putative permease component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] gi|115253376|emb|CAK11764.1| putative permease component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] Length = 219 Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 38/123 (30%), Positives = 69/123 (56%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I + + A + AE+ R+G+ VPRGQ EAA A L+ R+A V+LPQA+ +IP L + Sbjct: 93 IGMGIHYATYTAEVYRAGIENVPRGQWEAAKATNLSTRQAWIHVILPQAIPPMIPALANY 152 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++ + K + L A+ +L++ +I N + IE + + +L +S++ + + L Sbjct: 153 FIAMFKETPLLSAITVLELMNQAKSIANSNYRYIEPMTLVGIFFLVISLISVVGLRWLEE 212 Query: 391 KIA 393 + A Sbjct: 213 RYA 215 >gi|89899834|ref|YP_522305.1| amino acid ABC transporter permease [Rhodoferax ferrireducens T118] gi|89344571|gb|ABD68774.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Rhodoferax ferrireducens T118] Length = 227 Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 64/211 (30%), Positives = 108/211 (51%), Gaps = 30/211 (14%) Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233 R LS T + +A VF FVLG + + + RH + LP+L G+ Sbjct: 16 RLLSGLKYTAELSAAGIVFGFVLGTL-----SAIVRH------QKLPVLN-------GIV 57 Query: 234 TLVLIALKYQLHFDKPVLGQ--FNFIGGSTV----SPEFMSLYIALSCYTAAFIAEIVRS 287 ++ + A++ + P L Q F G ST+ S EF + +AL+ A+ EI+R+ Sbjct: 58 SVYVEAIR-----NTPFLVQAFLVFFGLSTLGIRLSAEFCAA-LALTLNAGAYTCEIMRA 111 Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347 GL A +GQ+EAA +LG+ V+L A+ + P LTSQ++ L+ ++S+ + Sbjct: 112 GLDATHKGQIEAAESLGMGWPAIYWHVMLLPAIEKVYPALTSQFVLLMLSTSITSQISAE 171 Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378 +L V + ++T ++ E+ L+ IYL+LS Sbjct: 172 ELTGVANIVQSETFRSFEVYLLVGAIYLALS 202 >gi|326789991|ref|YP_004307812.1| polar amino acid ABC transporter inner membrane protein [Clostridium lentocellum DSM 5427] gi|326540755|gb|ADZ82614.1| polar amino acid ABC transporter, inner membrane subunit [Clostridium lentocellum DSM 5427] Length = 225 Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 54/206 (26%), Positives = 103/206 (50%), Gaps = 22/206 (10%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 + S VLGIVL + T S+H K K + +Y+ I +P LV + + Y Sbjct: 34 ILSGVLGIVLGILMT--SKH---KAVKVICRIYLEAIRI--IPILVWLFIFY-------- 78 Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 G IG + E +S+ I + + A + +IVR + ++P+ Q ++ A+GL+ + Sbjct: 79 FGLTKLIG-YHIEAEIISI-IVFTLWGTAEMGDIVRGAITSMPKAQSDSGRAIGLSEIQI 136 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370 R +++PQA+R ++P + ++K +SL V +G +++ VG II + + +W Sbjct: 137 YRYIIIPQAIRRMLPTAINLATRMVKTTSLIVLIGVVEVLKVGQQIIEASILKVPSAPLW 196 Query: 371 MF-----IYLSLSIMIALFMNRLNAK 391 ++ +Y + I++F +L K Sbjct: 197 VYGFIFILYFIICYPISIFSKKLEMK 222 Score = 37.4 bits (85), Expect = 4.5, Method: Compositional matrix adjust. Identities = 20/51 (39%), Positives = 30/51 (58%) Query: 99 LAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 +A MI + ++G ++G S +K V ICR+Y+E R IP LV +F Y Sbjct: 28 VALIAMILSGVLGIVLGILMTSKHKAVKVICRIYLEAIRIIPILVWLFIFY 78 >gi|262047371|ref|ZP_06020328.1| amino acid ABC transporter permease [Lactobacillus crispatus MV-3A-US] gi|260572345|gb|EEX28908.1| amino acid ABC transporter permease [Lactobacillus crispatus MV-3A-US] Length = 223 Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 52/180 (28%), Positives = 89/180 (49%), Gaps = 27/180 (15%) Query: 222 LYISTFLIFGLPTLVLIALKY-----QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 LY+ F I +PT+VL+ L Y LH + P +M++ +A S + Sbjct: 60 LYLEFFRI--VPTVVLLYLVYYILPRSLHVNWPA--------------TWMAV-LAFSMW 102 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 AA ++IVR L +VP+ Q E+ +ALGL + R VLLPQA++ +P + ++K Sbjct: 103 VAAEFSDIVRGALESVPKTQRESGLALGLNRLQLFRYVLLPQAVKLELPATINLATRVIK 162 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF-----IYLSLSIMIALFMNRLNAK 391 +SL + + ++++V II Q + W++ +Y L ++ + RL AK Sbjct: 163 TTSLLMIINIMEVINVVQQIIEANNQQYPAGVFWVYGFIFILYFILDYPLSAWAKRLTAK 222 Score = 38.5 bits (88), Expect = 1.8, Method: Compositional matrix adjust. Identities = 18/68 (26%), Positives = 38/68 (55%) Query: 82 DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141 + S ++ G + W+A +I +GT+ G R N+ + ++ R+Y+E FR +P Sbjct: 11 EGSNFARLMAGLWTSIWIAALSLIIGLAVGTIFGILRTLKNRPIRFVLRLYLEFFRIVPT 70 Query: 142 LVVIFFLY 149 +V+++ +Y Sbjct: 71 VVLLYLVY 78 >gi|312796581|ref|YP_004029503.1| cystine transport system permease protein [Burkholderia rhizoxinica HKI 454] gi|312168356|emb|CBW75359.1| Cystine transport system permease protein [Burkholderia rhizoxinica HKI 454] Length = 219 Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 36/128 (28%), Positives = 72/128 (56%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +ALS +A+++E +R ++ + RGQ AA +LGL+ ++ R V+ PQA+R +P L++ Sbjct: 92 LALSANVSAYLSESMRGAILGIARGQWLAAYSLGLSRQQTLRYVVGPQALRIAVPSLSNS 151 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++L+K++SL + +L+ +I T Q + + + +Y L ++ +RL Sbjct: 152 LISLVKDTSLVSVITVTELLHSAQEVIAATYQPLPLYVGAASVYWVLCHLLEGLQHRLER 211 Query: 391 KIALKEKK 398 +AL + Sbjct: 212 YLALPTRH 219 >gi|222102299|ref|YP_002546889.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD [Agrobacterium radiobacter K84] gi|221728416|gb|ACM31425.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD [Agrobacterium radiobacter K84] Length = 237 Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 40/130 (30%), Positives = 70/130 (53%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P + +AL+ + F+AE R+GL A+P GQ +A ALG + A R V++PQ + + Sbjct: 97 PPITTGILALAIHYGCFVAEAYRAGLEALPSGQRDAITALGFSRFAAYRHVIVPQLVPFL 156 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 IP L + +++ K + L ++ D++ V Q IE I + I+L +S+ +L Sbjct: 157 IPALGNLLVSIFKETPLLASIAVTDIMFVAMQYGADHFQYIEPITMCGLIFLVISLATSL 216 Query: 384 FMNRLNAKIA 393 + RL A ++ Sbjct: 217 IVRRLEAMVS 226 >gi|186474261|ref|YP_001861603.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia phymatum STM815] gi|184196593|gb|ACC74557.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia phymatum STM815] Length = 219 Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 35/123 (28%), Positives = 68/123 (55%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +AL+ A+++E +R ++ + +GQ AA +LGLTH + R V+ PQA+R +P L + Sbjct: 92 LALTANAGAYLSESMRGAILGISQGQWGAAHSLGLTHMQTLRYVICPQALRMAVPSLGNT 151 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++L+K++SL + +++ +I T Q + + L IY LS ++ + Sbjct: 152 LISLIKDTSLVSVITVTEMLRAAQEVIASTFQPLPLYLAAAAIYWLLSTGMSWVQRHVEV 211 Query: 391 KIA 393 ++A Sbjct: 212 RLA 214 >gi|37680520|ref|NP_935129.1| amino acid ABC transporter, permease protein [Vibrio vulnificus YJ016] gi|37199268|dbj|BAC95100.1| amino acid ABC transporter, permease protein [Vibrio vulnificus YJ016] Length = 227 Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 53/187 (28%), Positives = 90/187 (48%), Gaps = 13/187 (6%) Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLL-YISTFLIFGLPTLVLIALKYQLHFDKPVLGQF 254 LGI + L R SR++ +LP YI F G P LV QL+ + QF Sbjct: 34 LGIAIPLAVARNSRNYV----VSLPAWGYIYFFR--GTPLLV------QLYLIYYGMDQF 81 Query: 255 NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLV 314 + + + +A T+A+ AEI+R + +P+G++EAA A G++H R + Sbjct: 82 FPVKDTLWENAWFCALVAFVLNTSAYTAEIIRGAINGLPKGEVEAAKAYGMSHWMTYRRI 141 Query: 315 LLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374 +LP A+R +P +++ + +L S++A V DL + ++ E L Y Sbjct: 142 VLPSALRRALPAYSNEVIFMLHGSAVAGIVTILDLTGAARLVNSRYYAPFESFLTAGLFY 201 Query: 375 LSLSIMI 381 +SL+ +I Sbjct: 202 MSLTFLI 208 >gi|320155823|ref|YP_004188202.1| histidine ABC transporterpermease HisM [Vibrio vulnificus MO6-24/O] gi|319931135|gb|ADV85999.1| histidine ABC transporter, permease protein HisM [Vibrio vulnificus MO6-24/O] Length = 225 Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 53/187 (28%), Positives = 90/187 (48%), Gaps = 13/187 (6%) Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLL-YISTFLIFGLPTLVLIALKYQLHFDKPVLGQF 254 LGI + L R SR++ +LP YI F G P LV QL+ + QF Sbjct: 32 LGIAIPLAVARNSRNYV----VSLPAWGYIYFFR--GTPLLV------QLYLIYYGMDQF 79 Query: 255 NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLV 314 + + + +A T+A+ AEI+R + +P+G++EAA A G++H R + Sbjct: 80 FPVKDTLWENAWFCALVAFVLNTSAYTAEIIRGAINGLPKGEVEAAKAYGMSHWMTYRRI 139 Query: 315 LLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374 +LP A+R +P +++ + +L S++A V DL + ++ E L Y Sbjct: 140 VLPSALRRALPAYSNEVIFMLHGSAVAGIVTILDLTGAARLVNSRYYAPFESFLTAGLFY 199 Query: 375 LSLSIMI 381 +SL+ +I Sbjct: 200 MSLTFLI 206 >gi|153853349|ref|ZP_01994758.1| hypothetical protein DORLON_00747 [Dorea longicatena DSM 13814] gi|149754135|gb|EDM64066.1| hypothetical protein DORLON_00747 [Dorea longicatena DSM 13814] Length = 216 Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 33/115 (28%), Positives = 65/115 (56%), Gaps = 1/115 (0%) Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 AA+ AEI R G+ A+P GQ EAA LG + + ++ PQ + I+P +T++ + L+K+ Sbjct: 99 AAYFAEIYRGGIEAIPVGQYEAAKVLGYSKGQTFFRIVFPQVCKHILPAVTNEIITLVKD 158 Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 +SLA + ++ ++ I + I +F Y+ ++++A+ M ++ K+ Sbjct: 159 TSLAFVLAVTEMFTMAKQIAAAQTSMVPYIAAGIFYYV-FNLLVAMIMEKIEEKL 212 >gi|121607717|ref|YP_995524.1| polar amino acid ABC transporter inner membrane subunit [Verminephrobacter eiseniae EF01-2] gi|121552357|gb|ABM56506.1| polar amino acid ABC transporter, inner membrane subunit [Verminephrobacter eiseniae EF01-2] Length = 241 Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 58/197 (29%), Positives = 94/197 (47%), Gaps = 18/197 (9%) Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252 V+G L+L RLSRH + A YI F G P LV + + Y P LG Sbjct: 37 GLVVGCALAL--ARLSRH---RWLAAPAHFYIWVFR--GTPLLVQLIIIYT---GLPQLG 86 Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312 + S V + L + AA++AE+VR G+ +V GQ AA A+G + ++ R Sbjct: 87 ----VKLSVVESALLGLILN----EAAYLAEVVRGGIQSVSVGQTNAARAVGFSSAQSMR 138 Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372 +++PQAMR IIP L + LLK +S+ + +L+ +I + +E+ ++ Sbjct: 139 YIVMPQAMRLIIPTLGNSINGLLKTTSITSVISMEELLRRTQVLIQEKFMVLELFIVAAI 198 Query: 373 IYLSLSIMIALFMNRLN 389 YL ++ + R+ Sbjct: 199 YYLLMTTVWDFIQRRIE 215 Score = 37.0 bits (84), Expect = 5.1, Method: Compositional matrix adjust. Identities = 19/61 (31%), Positives = 31/61 (50%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 IL G + T WL + + ++G + RLS ++ +A Y+ VFR P LV + + Sbjct: 19 ILSGALTTLWLTLAAIAGGLVVGCALALARLSRHRWLAAPAHFYIWVFRGTPLLVQLIII 78 Query: 149 Y 149 Y Sbjct: 79 Y 79 >gi|330444606|ref|YP_004377592.1| amino acid ABC transporter permease [Chlamydophila pecorum E58] gi|328807716|gb|AEB41889.1| amino acid ABC transporter, permease protein [Chlamydophila pecorum E58] Length = 204 Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 35/112 (31%), Positives = 66/112 (58%) Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326 M+ +AL+ +AA++AE +R G+ A+ GQ E+A LG + +L PQ R+++P Sbjct: 78 MAGIMALTINSAAYLAENIRGGINAISVGQWESAKVLGYRPYQTFLYILYPQVFRNVLPS 137 Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378 L ++++ L+K SS+ + VG +L V I+++ +E+ I +YL ++ Sbjct: 138 LMNEFIALIKESSILMVVGIPELTKVSKDIVSRELNPMEMYSICAALYLMMT 189 >gi|307296170|ref|ZP_07576000.1| ABC transporter, permease protein [Enterococcus faecalis TX0411] gi|306496144|gb|EFM65724.1| ABC transporter, permease protein [Enterococcus faecalis TX0411] Length = 214 Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 29/76 (38%), Positives = 49/76 (64%) Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 AA+ AEI G+ A+P+GQ EAA L LT + ++LPQ ++ ++P + ++ +NL+K+ Sbjct: 97 AAYFAEIFHGGIQAIPQGQYEAAKVLRLTRFQTVTRIILPQVVKIVLPSVGNEIINLVKD 156 Query: 338 SSLAVAVGFADLVSVG 353 +SL +G DL+ G Sbjct: 157 TSLIYVLGLGDLLRAG 172 >gi|300718268|ref|YP_003743071.1| polar amino acid ABC transporter, innermembrane subunit [Erwinia billingiae Eb661] gi|299064104|emb|CAX61224.1| polar amino acid ABC transporter, innermembrane subunit [Erwinia billingiae Eb661] Length = 268 Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 37/103 (35%), Positives = 62/103 (60%), Gaps = 1/103 (0%) Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320 T SP F ++ + LS TAA AE++R + +V GQ E+A ++G ++ + RLV+LPQA Sbjct: 131 TFSPLFKAI-VGLSLPTAANFAEVIRGAVQSVHSGQWESARSMGYSYWQIYRLVILPQAF 189 Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363 R IIP + Y L +++LA G ++V++ T + G++ Sbjct: 190 RRIIPGWMNLYALLTISTALATVTGVQEVVTLLRTTLATEGES 232 >gi|126730634|ref|ZP_01746444.1| ABC transporter, membrane spanning protein [Sagittula stellata E-37] gi|126708800|gb|EBA07856.1| ABC transporter, membrane spanning protein [Sagittula stellata E-37] Length = 216 Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 34/117 (29%), Positives = 62/117 (52%) Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339 F++EI R + AVPRGQ EA+ +L +++ + R V+LPQA I P ++++K ++ Sbjct: 100 FLSEIWRGCVAAVPRGQWEASSSLAMSYVEQMRYVVLPQAFSLAIGPTVGFLVDIMKATA 159 Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 + +G+ +L G I N T Q ++ IY L +++ R+ K ++ Sbjct: 160 VTAIIGYVELFQAGNAIANTTFQPFKVYGFVAIIYFLLCWPVSIAARRIEEKYSVSH 216 >gi|322513522|ref|ZP_08066623.1| arginine ABC superfamily ATP binding cassette transporter, permease protein [Actinobacillus ureae ATCC 25976] gi|322120675|gb|EFX92566.1| arginine ABC superfamily ATP binding cassette transporter, permease protein [Actinobacillus ureae ATCC 25976] Length = 222 Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 38/127 (29%), Positives = 68/127 (53%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +ALS AA+ ++ +R + AVP GQ E+ ALGL+ +++PQ R +P L++Q Sbjct: 94 LALSLIFAAYASQSLRGAIQAVPNGQWESGAALGLSRAHTFLKIIMPQVWRHALPGLSNQ 153 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 +L LLK+++L +G DL+ I Q + IYL+++++ + + RL Sbjct: 154 WLVLLKDTALISLIGVDDLMRQTDLINTNEHQPFTWYGLAALIYLAITLISQVIIARLEK 213 Query: 391 KIALKEK 397 + E+ Sbjct: 214 RFTRFER 220 >gi|225163802|ref|ZP_03726100.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC [Opitutaceae bacterium TAV2] gi|224801595|gb|EEG19893.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC [Opitutaceae bacterium TAV2] Length = 229 Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 60/205 (29%), Positives = 104/205 (50%), Gaps = 16/205 (7%) Query: 193 SFVLGIVLSLFA--TRLSRHFHEKTGKALPLL-YISTFLIFGLPTLVLIALKYQLHFDKP 249 S +LG+ L + TRLS H + LP Y+ ++ G P LV I + Y F P Sbjct: 28 SVILGVTLGVGVALTRLSSHAWLR----LPATAYVE--VLRGTPMLVQIFIMYFAFF--P 79 Query: 250 VLGQF-NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308 +L + + G + + +AL ++A++ EI R G+ +V GQ EA +LG+T Sbjct: 80 MLAEHVPGLEGLARANAIYAGMLALGVNSSAYLGEIFRGGIQSVDIGQYEAGRSLGMTPY 139 Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV----SVGGTIINQTGQAI 364 + R ++LPQA+ + +P + ++++ L+K+SSL A+ ADL GG + Sbjct: 140 RIMRHIVLPQALVNALPAVGNEFVTLIKDSSLVSAIAVADLTYRAQQAGGRSYEFFSMYL 199 Query: 365 EIILIWMFIYLSLSIMIALFMNRLN 389 I +I+ + + S +A+F +L Sbjct: 200 AIAIIYFCLTFAASRGLAVFEKKLR 224 >gi|168576494|ref|ZP_02722368.1| ABC transporter membrane-spanning permease - glutamine transport [Streptococcus pneumoniae MLV-016] gi|307067223|ref|YP_003876189.1| amino acid ABC transporter permease [Streptococcus pneumoniae AP200] gi|183577685|gb|EDT98213.1| ABC transporter membrane-spanning permease - glutamine transport [Streptococcus pneumoniae MLV-016] gi|306408760|gb|ADM84187.1| ABC-type amino acid transport system, permease component [Streptococcus pneumoniae AP200] Length = 219 Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 28/73 (38%), Positives = 50/73 (68%) Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 A + +T+A + EI+R GL AV +GQ EA ++ G T + ++LPQA+R ++P + SQ+ Sbjct: 90 AFTLFTSAALVEIIRGGLNAVDKGQYEAGMSQGFTSAQILYYIILPQAIRKMLPAIISQF 149 Query: 332 LNLLKNSSLAVAV 344 + ++K++SL +V Sbjct: 150 VTVIKDTSLLYSV 162 Score = 38.9 bits (89), Expect = 1.5, Method: Compositional matrix adjust. Identities = 21/61 (34%), Positives = 36/61 (59%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 I GF T +++ +I +TIIGT++ R N ++ I +Y+E RN+P L+ IF + Sbjct: 16 IFKGFGLTLYISLIAIILSTIIGTVLAVMRNGKNPVLRIISSIYIEFVRNVPNLLWIFTI 75 Query: 149 Y 149 + Sbjct: 76 F 76 >gi|49475803|ref|YP_033844.1| amino acid permease [Bartonella henselae str. Houston-1] gi|49238610|emb|CAF27851.1| Amino acid permease [Bartonella henselae str. Houston-1] Length = 238 Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 38/139 (27%), Positives = 74/139 (53%), Gaps = 1/139 (0%) Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315 FI G+++ S I + + A+ AEI+R+G+ +V +GQ A ALG+T+ + +V+ Sbjct: 99 FITGTSIGAN-KSALITFTAFETAYFAEIIRAGINSVSQGQKHAGQALGMTYWQNMYIVI 157 Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375 LPQA R ++P +Q + L ++++L A+ L++ + N G E ++ Y Sbjct: 158 LPQAFRDMLPVFLTQVIILFQDTTLVYAISGNSLLNGFDIVANNFGVKQEAYILAAIFYF 217 Query: 376 SLSIMIALFMNRLNAKIAL 394 + ++ + L KI++ Sbjct: 218 VICFTLSQIVLYLQKKISI 236 >gi|37525533|ref|NP_928877.1| arginine transporter permease subunit ArtQ [Photorhabdus luminescens subsp. laumondii TTO1] gi|36784961|emb|CAE13879.1| Arginine transport system permease protein artQ [Photorhabdus luminescens subsp. laumondii TTO1] Length = 238 Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 39/128 (30%), Positives = 71/128 (55%), Gaps = 1/128 (0%) Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321 VSP F+ IALS +A+ ++ +R + A+P GQ EA ALGL + +++PQ R Sbjct: 101 VSP-FLCGVIALSLLYSAYASQTLRGAIKAIPIGQWEAGQALGLGRAEIFFRLIMPQMWR 159 Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 +P L +Q+L LLK+++L + DL+ +I +T + +I IYL+++++ Sbjct: 160 HALPGLGNQWLVLLKDTALVSLISVNDLMQQTKSIATRTQEPFTWYMIVALIYLAITLIS 219 Query: 382 ALFMNRLN 389 + ++ Sbjct: 220 QFILKKIE 227 >gi|299530122|ref|ZP_07043548.1| glutamine-binding periplasmic protein [Comamonas testosteroni S44] gi|298721779|gb|EFI62710.1| glutamine-binding periplasmic protein [Comamonas testosteroni S44] Length = 220 Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 56/217 (25%), Positives = 105/217 (48%), Gaps = 36/217 (16%) Query: 188 KIFVFSFVLGIVLS----------LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVL 237 K+ V SFV G++L L RL+ + + + +P + + F++F LP L + Sbjct: 24 KLTVVSFVPGVMLGTVVAVLRLMPLPPLRLALTVYVEIFRNIPSVALLIFIVFALPDLNI 83 Query: 238 IALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQM 297 + + Y+ S+ + L+ +AF A+ +RSG+ +P Q+ Sbjct: 84 V-IDYE-----------------------PSVILTLTLVCSAFTADYLRSGINTIPGSQI 119 Query: 298 EAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA--DLVSVGGT 355 EAA++LG+ + V+LPQA+RS++ P+TS + L+ ++SLA + F +L ++ Sbjct: 120 EAALSLGMRPLQIVSAVVLPQALRSVVQPMTSLLIALMLSTSLASQLPFPGRELTALVSK 179 Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 I N + I + +Y+ ++IA L K+ Sbjct: 180 IANDSALGIAAFAVAATMYVVTGLLIAWAGAALEKKV 216 Score = 37.7 bits (86), Expect = 3.3, Method: Compositional matrix adjust. Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 6/85 (7%) Query: 83 SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142 + Y A + T+ L +P ++GT+V RL + VYVE+FRNIP + Sbjct: 9 ADYGPAFWQALLLTWKLTVVSFVPGVMLGTVVAVLRLMPLPPLRLALTVYVEIFRNIPSV 68 Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPF 167 ++ F+ V +PD +IV+ + Sbjct: 69 ALLIFI------VFALPDLNIVIDY 87 >gi|33596085|ref|NP_883728.1| putative amino-acid ABC transporter, permease protein [Bordetella parapertussis 12822] gi|33573088|emb|CAE36730.1| putative amino-acid ABC transporter, permease protein [Bordetella parapertussis] Length = 226 Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 37/132 (28%), Positives = 66/132 (50%), Gaps = 4/132 (3%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I + A+ +E++R + ++PRGQ EAA +L +T +A R +LPQA R +PPL + Sbjct: 94 IGFTLNVGAYNSEVIRGAIESIPRGQWEAAYSLSMTRGQAMRRTVLPQAARVAVPPLANS 153 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI----EIILIWMFIYLSLSIMIALFMN 386 ++ L+K++SLA + ++ I T + + E LI++ +LS + Sbjct: 154 FIALVKDTSLAAVLTVPEIFQAAQRIAAVTYEPLILYTEAALIYLVFSSALSSLQVHLEK 213 Query: 387 RLNAKIALKEKK 398 R E+ Sbjct: 214 RFGQHAVFAEQH 225 >gi|298294041|ref|YP_003695980.1| polar amino acid ABC transporter inner membrane subunit [Starkeya novella DSM 506] gi|296930552|gb|ADH91361.1| polar amino acid ABC transporter, inner membrane subunit [Starkeya novella DSM 506] Length = 226 Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 39/119 (32%), Positives = 65/119 (54%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I L+ +AF++E+ RSG+ +VPR Q EAA +LGL+ V+ PQA R ++P L + Sbjct: 94 IGLTINYSAFMSEVYRSGIQSVPRSQYEAAQSLGLSPTITFVKVIFPQAFRVVLPALGNY 153 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 + L K+++LA V +L+ G I + Q + + +Y ++ AL + RL Sbjct: 154 LIALFKDTALASVVTVQELMFSGQIIAARNYQYFTVYTVTAILYFAVGYPSALLVRRLE 212 >gi|110803729|ref|YP_698645.1| glutamine ABC transporter permease [Clostridium perfringens SM101] gi|110684230|gb|ABG87600.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Clostridium perfringens SM101] Length = 213 Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 31/98 (31%), Positives = 55/98 (56%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 F + IA + AA+ EI RSG+ + +GQ EA+ LGL+ + ++LPQ+ + + Sbjct: 83 RFPAAIIAFTLNYAAYFGEIFRSGIKDIDKGQFEASKILGLSKWFTFKKIILPQSFKKTL 142 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362 P +T++ + L+K++SL VG +L+ G N+ Sbjct: 143 PSITNEVITLVKDTSLVYVVGIGELLRAGKIASNRDAS 180 >gi|315282710|ref|ZP_07871057.1| amino acid ABC transporter, permease protein [Listeria marthii FSL S4-120] gi|313613646|gb|EFR87443.1| amino acid ABC transporter, permease protein [Listeria marthii FSL S4-120] Length = 108 Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 31/104 (29%), Positives = 64/104 (61%), Gaps = 1/104 (0%) Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347 G +++ GQ E+A LGLT+ + R ++LPQ ++ ++P + ++ +NL+K+SSL +G Sbjct: 1 GFLSIENGQYESAKVLGLTYGQTLRKIVLPQVVKRVLPAIGNEVINLVKDSSLVYILGIG 60 Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 DL+ G +++ I ++L+ IYL+L+ ++ + +L + Sbjct: 61 DLLRAGKIAMSRDVTLIPLVLVAA-IYLALTAILTILFKQLEKR 103 >gi|297160231|gb|ADI09943.1| amino acid ABC transporter transmembrane protein [Streptomyces bingchenggensis BCW-1] Length = 216 Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 29/81 (35%), Positives = 50/81 (61%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IAL + + + AE+ R+G+ VP+GQ EA AL L+ + V+LPQA+R ++P L + Sbjct: 93 IALGLHYSTYTAEVYRAGIDGVPKGQWEACTALSLSRGRTWIAVILPQAIRRVVPALGNY 152 Query: 331 YLNLLKNSSLAVAVGFADLVS 351 + +LK+S + +G D++ Sbjct: 153 VIAMLKDSPMLALIGVVDMLQ 173 >gi|222106141|ref|YP_002546932.1| ABC transporter membrane spanning protein [Agrobacterium vitis S4] gi|221737320|gb|ACM38216.1| ABC transporter membrane spanning protein [Agrobacterium vitis S4] Length = 229 Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 36/119 (30%), Positives = 65/119 (54%) Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 AA+ AE++R L+AVP+G++EA A G+ R V LP+A+R +P + + + LK Sbjct: 111 AAYEAEVLRGALLAVPKGELEAGRAFGMGRFTLIRRVWLPRAIRIALPTIAGEVVMQLKA 170 Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 + LA V DL +V + T E +++ YL+++ +IA + A++ ++ Sbjct: 171 TPLAFTVTVMDLYAVAYKVRQDTLLVYEPLIVVTLFYLAITAIIARCFRMVEAQVPIRR 229 >gi|146319535|ref|YP_001199247.1| amino acid ABC transporter periplasmic protein [Streptococcus suis 05ZYH33] gi|145690341|gb|ABP90847.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain [Streptococcus suis 05ZYH33] Length = 297 Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 27/53 (50%), Positives = 39/53 (73%) Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 +S T A+++EIVR G+ AV +GQ EAA ALG TH + R ++LPQ +R+I+P Sbjct: 242 VSINTGAYMSEIVRGGIFAVDKGQFEAATALGFTHNQTMRKIVLPQVIRNILP 294 >gi|295094949|emb|CBK84040.1| ABC-type amino acid transport system, permease component [Coprococcus sp. ART55/1] Length = 137 Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 33/122 (27%), Positives = 73/122 (59%) Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 + A+I+EI+R G+++V GQME A+GL+ +++PQA+++I+P L +++++L+K Sbjct: 15 SGAYISEIMRGGILSVDPGQMEGGRAMGLSFSTTMLKIVIPQAVKNILPTLGNEFISLIK 74 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 +S+ VG DL I + + + + L+ IY+ + ++I+L + + + + Sbjct: 75 ETSVVSFVGATDLYVAFNYIGSNSYEFMVPYLVMALIYIVMVLLISLGIKLMERSLRKSD 134 Query: 397 KK 398 ++ Sbjct: 135 RR 136 >gi|289450156|ref|YP_003475673.1| ABC transporter ATP-binding protein [Clostridiales genomosp. BVAB3 str. UPII9-5] gi|289184703|gb|ADC91128.1| ABC transporter, ATP-binding protein [Clostridiales genomosp. BVAB3 str. UPII9-5] Length = 580 Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 38/131 (29%), Positives = 73/131 (55%), Gaps = 1/131 (0%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F +++I +S T A++AE VR G++++ GQ E A ALGL H + R ++LPQA+R+I+P Sbjct: 111 FAAIFI-VSINTGAYMAETVRGGVMSIDPGQTEGAKALGLNHYRTMRSIILPQAIRNIMP 169 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 + + + +K++ + +G +L +I T + M IY +++ + + Sbjct: 170 QIGNNLIINIKDTCVLSIIGVMELFYTMKSISGATYAFFPTFTVAMVIYFAITFTCSRLL 229 Query: 386 NRLNAKIALKE 396 L ++A +E Sbjct: 230 LCLEHRLAGEE 240 >gi|288935411|ref|YP_003439470.1| polar amino acid ABC transporter inner membrane subunit [Klebsiella variicola At-22] gi|288890120|gb|ADC58438.1| polar amino acid ABC transporter, inner membrane subunit [Klebsiella variicola At-22] Length = 218 Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 33/96 (34%), Positives = 56/96 (58%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +AL+ YT+AF+ +I + A+P+GQ EA+ LGL+ + V+ PQA+R I P Sbjct: 91 VALTLYTSAFLLDIWFGSIRALPKGQWEASRCLGLSFGQTLYRVVAPQALRIAIAPTVGF 150 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 + ++K ++LA +GF +L G + N T Q ++ Sbjct: 151 AVQVIKGTALASIIGFVELTKAGTMLTNVTYQPFKV 186 >gi|323466465|gb|ADX70152.1| Amino acid ABC transporter, permease protein [Lactobacillus helveticus H10] Length = 230 Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 43/151 (28%), Positives = 79/151 (52%), Gaps = 12/151 (7%) Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281 +Y+ F I +PT+VL+ Y +++ P N+ P +A S + AA Sbjct: 66 IYLEFFRI--VPTIVLL---YLVYYILPRTFHVNW-------PATWMAVLAFSLWVAAEF 113 Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341 ++IVR + +VP+ Q E+ +ALGL+ + R VLLPQA++ +P + ++K +SL Sbjct: 114 SDIVRGAIESVPKSQRESGLALGLSKIQLFRYVLLPQAVKLELPATINLATRVIKTTSLL 173 Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMF 372 + + ++++VG II Q + W++ Sbjct: 174 LVISIMEVINVGQQIIEANNQQYPTGVFWVY 204 Score = 42.7 bits (99), Expect = 0.095, Method: Compositional matrix adjust. Identities = 20/68 (29%), Positives = 39/68 (57%) Query: 82 DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141 + S ++ G + W+A +I IGT+ G R NK++ ++ R+Y+E FR +P Sbjct: 17 EGSNFARLMAGLWTSIWIAAISLIIGLAIGTIFGILRTLPNKIIRFVLRIYLEFFRIVPT 76 Query: 142 LVVIFFLY 149 +V+++ +Y Sbjct: 77 IVLLYLVY 84 >gi|291561989|emb|CBL40800.1| amino acid ABC transporter membrane protein, PAAT family (TC 3.A.1.3.-) [butyrate-producing bacterium SS3/4] Length = 236 Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 36/122 (29%), Positives = 74/122 (60%) Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 + A+I+EI+RSG+ +V GQ+EA A+GL A +++PQA+++I+P L ++++ L+K Sbjct: 114 SGAYISEIMRSGIQSVDPGQLEAGRAVGLGFGPAMIRIVIPQAVKNILPTLGNEFIALIK 173 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 +S+ VG ADL I + + + + L+ IY+ L ++I++ + + + + Sbjct: 174 ETSVVSFVGAADLYVAFNYIGSNSYEFMVPYLVMAAIYIVLVLVISILVKLMERSLKKSD 233 Query: 397 KK 398 ++ Sbjct: 234 RR 235 >gi|283796771|ref|ZP_06345924.1| amino acid ABC transporter, permease protein [Clostridium sp. M62/1] gi|291075659|gb|EFE13023.1| amino acid ABC transporter, permease protein [Clostridium sp. M62/1] gi|295092614|emb|CBK78721.1| amino acid ABC transporter membrane protein, PAAT family (TC 3.A.1.3.-) [Clostridium cf. saccharolyticum K10] gi|295115213|emb|CBL36060.1| amino acid ABC transporter membrane protein, PAAT family (TC 3.A.1.3.-) [butyrate-producing bacterium SM4/1] Length = 216 Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 32/115 (27%), Positives = 66/115 (57%), Gaps = 1/115 (0%) Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 AA+ AEI RSG+ ++P GQ EAA LG + + ++ PQ ++ I+P +T++ + L+K+ Sbjct: 99 AAYFAEIYRSGIQSMPAGQYEAAKMLGYSRTQTFFRIIFPQVIKRILPSITNEVITLVKD 158 Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 +SLA + ++ +V + + I + +F Y+ ++++A+ M ++ Sbjct: 159 TSLAFTISVMEMFTVAKALASSQVSMIPFVAAGLFYYV-FNLLVAVVMEHAEKRL 212 >gi|78186725|ref|YP_374768.1| amino acid ABC transporter permease [Chlorobium luteolum DSM 273] gi|78186899|ref|YP_374942.1| amino acid ABC transporter permease [Chlorobium luteolum DSM 273] gi|78166627|gb|ABB23725.1| amino acid ABC transporter membrane protein, PAAT family / amino acid ABC transporter substrate-binding protein, PAAT family [Chlorobium luteolum DSM 273] gi|78166801|gb|ABB23899.1| amino acid ABC transporter membrane protein, PAAT family / amino acid ABC transporter substrate-binding protein, PAAT family [Chlorobium luteolum DSM 273] Length = 508 Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 47/171 (27%), Positives = 83/171 (48%), Gaps = 12/171 (7%) Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287 L+ G P LVL+ L + + F + P +++ IA AA+ AEI R+ Sbjct: 345 LLRGTPVLVLLMLVFYVVF-----------ASVNIDPVLVAV-IAFGLNFAAYSAEIFRA 392 Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347 G+ + RGQ EA IA+G T ++LPQ ++ I+P ++++L+K +S+ + Sbjct: 393 GIEGIDRGQTEAGIAMGFTGPATFYFIVLPQTLQRILPVYKGEFISLVKMTSIVGYIAVQ 452 Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 DL G I ++T A +++ +Y LS + + L +A K + Sbjct: 453 DLTKAGDIIRSRTFDAFFPLIMVAALYFFLSWALMRMLEYLEGMMAPKHRN 503 >gi|87302594|ref|ZP_01085411.1| permease protein of amino acid ABC transporter [Synechococcus sp. WH 5701] gi|87282938|gb|EAQ74895.1| permease protein of amino acid ABC transporter [Synechococcus sp. WH 5701] Length = 427 Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 59/187 (31%), Positives = 95/187 (50%), Gaps = 33/187 (17%) Query: 167 FGMFLNNRGLSFPT----------LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTG 216 GM L GL P LT+ + + SF +G+V++L R Sbjct: 197 LGMVLIAGGLGIPRVPPSEWGGLLLTLLMASFAILLSFPIGVVVAL-----GRR------ 245 Query: 217 KALPLL-YISTF---LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIA 272 +LPLL + S F I G P + L L + +LG + GG + + ++ Sbjct: 246 SSLPLLRWTSVFYIEFIRGAPLITL------LFLGQNILG-YMLPGGWAPDRVWRAAWV- 297 Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 L+ + A++AE VR+GL AVP GQ+EAA +LGL+ A + V+LPQA+R +P Q++ Sbjct: 298 LTFFCGAYLAEAVRAGLSAVPPGQLEAARSLGLSMPLALQRVVLPQALRIALPAAVGQFI 357 Query: 333 NLLKNSS 339 +LL++++ Sbjct: 358 SLLQDTT 364 >gi|57504977|ref|ZP_00370929.1| amino acid ABC transporter, permease protein [Campylobacter coli RM2228] gi|305432023|ref|ZP_07401190.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Campylobacter coli JV20] gi|57019249|gb|EAL55955.1| amino acid ABC transporter, permease protein [Campylobacter coli RM2228] gi|304445107|gb|EFM37753.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Campylobacter coli JV20] Length = 219 Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 36/124 (29%), Positives = 66/124 (53%), Gaps = 7/124 (5%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I S YT++ +AEI+R GL ++P+GQ EAA + G + ++LPQ R ++P L SQ Sbjct: 91 IGFSLYTSSVMAEIIRGGLNSIPKGQFEAAYSQGFSKFFTLFYIILPQTFRKVVPSLLSQ 150 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII-------LIWMFIYLSLSIMIAL 383 + +K+++ + A+L I+ + EI+ +I+ I SLS+++ Sbjct: 151 IVTTVKDTAYLAGLQIAELTYNSKNILARLTSFDEILATIGFVAVIYFAICFSLSMLVRY 210 Query: 384 FMNR 387 + + Sbjct: 211 YAKK 214 >gi|152970316|ref|YP_001335425.1| amino acid ABC transporter membrane protein [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238894800|ref|YP_002919534.1| putative amino acid ABC transport system permease component [Klebsiella pneumoniae NTUH-K2044] gi|150955165|gb|ABR77195.1| putative amino acid transport protein (ABC superfamily, membrane) [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238547116|dbj|BAH63467.1| putative amino acid ABC transport system permease component [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] Length = 218 Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 33/96 (34%), Positives = 56/96 (58%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +AL+ YT+AF+ +I + A+P+GQ EA+ LGL+ + V+ PQA+R I P Sbjct: 91 VALTLYTSAFLLDIWFGSIRALPKGQWEASRCLGLSFGQTLYRVVAPQALRIAIAPTVGF 150 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 + ++K ++LA +GF +L G + N T Q ++ Sbjct: 151 AVQVIKGTALASIIGFVELTKAGTMLTNVTYQPFKV 186 >gi|148998280|ref|ZP_01825749.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP11-BS70] gi|147755923|gb|EDK62967.1| amino acid ABC transporter, permease protein [Streptococcus pneumoniae SP11-BS70] Length = 180 Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 28/73 (38%), Positives = 50/73 (68%) Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 A + +T+A + EI+R GL AV +GQ EA ++ G T + ++LPQA+R ++P + SQ+ Sbjct: 90 AFTLFTSAALVEIIRGGLNAVDKGQYEAGMSQGFTSAQILYYIILPQAIRKMLPAIISQF 149 Query: 332 LNLLKNSSLAVAV 344 + ++K++SL +V Sbjct: 150 VTVIKDTSLLYSV 162 Score = 38.5 bits (88), Expect = 1.8, Method: Compositional matrix adjust. Identities = 21/61 (34%), Positives = 36/61 (59%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 I GF T +++ +I +TIIGT++ R N ++ I +Y+E RN+P L+ IF + Sbjct: 16 IFKGFGLTLYISLIAIILSTIIGTVLAVMRNGKNPVLRIISSIYIEFVRNVPNLLWIFTI 75 Query: 149 Y 149 + Sbjct: 76 F 76 >gi|149377566|ref|ZP_01895306.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Marinobacter algicola DG893] gi|149358179|gb|EDM46661.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Marinobacter algicola DG893] Length = 224 Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 27/81 (33%), Positives = 56/81 (69%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + L+ + +A++AE +R+ ++ V R Q EAA+++G+T+ + R ++LPQA R +P L + Sbjct: 97 MGLTMHFSAYMAESIRAAIVGVDRSQTEAALSIGMTNGQLMRRIVLPQATRVALPTLMNY 156 Query: 331 YLNLLKNSSLAVAVGFADLVS 351 +++++K +SLA +G +L+ Sbjct: 157 FIDMIKATSLAFTLGVTELMG 177 >gi|83950195|ref|ZP_00958928.1| polar amino acid uptake family ABC transporter, permease protein [Roseovarius nubinhibens ISM] gi|83838094|gb|EAP77390.1| polar amino acid uptake family ABC transporter, permease protein [Roseovarius nubinhibens ISM] Length = 246 Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 68/244 (27%), Positives = 112/244 (45%), Gaps = 17/244 (6%) Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS 208 Y S+L L PD L NRG L M AK+ V S +++ + Sbjct: 3 YSSILDWL-WPDWFFNLAVVSDEYNRGRYLAGLWM--TAKLAVVSIFFSLIIGAIGAAV- 58 Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE--- 265 + KT + L +++ F P LV QL+F +G I G P+ Sbjct: 59 QGAQSKTLRVLVGFFVAFFR--NTPPLV------QLYFFYFAIGTVLRITGDNGLPQPLI 110 Query: 266 --FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 F I+LS + A EI R+G+ AVP+ +EAA ALG T + ++LP A+R Sbjct: 111 GNFGWAIISLSLFAGALNVEIFRAGIEAVPKSTVEAAEALGYTRLQIYTDIVLPLAVRIS 170 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 +P L + +NL+K ++LA A+ +L+ V I ++ E++ + + Y+ L ++ Sbjct: 171 LPALGTNLVNLVKTTTLAYAIAVPELLYVSAQIWSEDLNVREMMNVLLISYVGLVAILVW 230 Query: 384 FMNR 387 ++R Sbjct: 231 VLHR 234 >gi|206580810|ref|YP_002238437.1| amino acid ABC transporter, permease protein [Klebsiella pneumoniae 342] gi|290509461|ref|ZP_06548832.1| polar amino acid transport system permease [Klebsiella sp. 1_1_55] gi|206569868|gb|ACI11644.1| amino acid ABC transporter, permease protein [Klebsiella pneumoniae 342] gi|289778855|gb|EFD86852.1| polar amino acid transport system permease [Klebsiella sp. 1_1_55] Length = 218 Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 33/96 (34%), Positives = 56/96 (58%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +AL+ YT+AF+ +I + A+P+GQ EA+ LGL+ + V+ PQA+R I P Sbjct: 91 VALTLYTSAFLLDIWFGSIRALPKGQWEASRCLGLSFGQTLYRVVAPQALRIAIAPTVGF 150 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 + ++K ++LA +GF +L G + N T Q ++ Sbjct: 151 AVQVIKGTALASIIGFVELTKAGTMLTNVTYQPFKV 186 >gi|167841278|ref|ZP_02467962.1| ABC amino acid transporter, inner membrane subunit [Burkholderia thailandensis MSMB43] Length = 223 Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 43/131 (32%), Positives = 70/131 (53%), Gaps = 4/131 (3%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P ++ A+S +AA++AEI+R G ++VP G +EAA LG+ + +PQA R Sbjct: 93 PPLVAAVSAVSLCSAAYVAEILRGGFLSVPYGHIEAARMLGMRAFATLWRIKVPQATRLT 152 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 +P L ++ + L+K SSL VG A++ I T + +E L IY ++ +A Sbjct: 153 LPSLANEMVLLIKASSLISVVGVAEVTRTAQNIAASTYRPLEAYLAAGLIYFVINGTLAA 212 Query: 384 FM----NRLNA 390 F +RL+A Sbjct: 213 FAHLAEHRLHA 223 >gi|292670512|ref|ZP_06603938.1| amino acid ABC superfamily ATP binding cassette transporter, permease protein [Selenomonas noxia ATCC 43541] gi|292647922|gb|EFF65894.1| amino acid ABC superfamily ATP binding cassette transporter, permease protein [Selenomonas noxia ATCC 43541] Length = 235 Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 39/124 (31%), Positives = 68/124 (54%), Gaps = 1/124 (0%) Query: 260 STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319 V P + +++I + T A + E RS L+A+P+GQ+EA +A GL+ + V++PQA Sbjct: 97 EAVDPFWYAVFI-FTINTIALLTEAFRSALLAIPKGQLEAGLAGGLSELQTYLHVIIPQA 155 Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379 + +P + + +NL+K +SLA + D+ +VG + IE L +YL L Sbjct: 156 LVVALPSIANITVNLIKGTSLAFLMTVKDITAVGKVAASYGYNYIEAYLDVFLVYLVLCT 215 Query: 380 MIAL 383 ++ L Sbjct: 216 VVQL 219 >gi|195973408|gb|ACG63351.1| allantoate transport membrane protein [Klebsiella oxytoca M5al] Length = 218 Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 38/121 (31%), Positives = 64/121 (52%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +AL+ YT+AF+ +I + A+P+GQ EA+ LGL+ + V+ PQA+R I P Sbjct: 91 LALTLYTSAFLLDIWFGSIRALPKGQWEASRCLGLSFGQTLYRVVAPQALRIAIAPTVGF 150 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 + ++K ++LA +GF +L G + N T Q ++ + Y L +A + L Sbjct: 151 AVQVIKGTALASIIGFVELTKAGTMLTNVTYQPFKVFALVALGYFILCYPLARYSRYLEN 210 Query: 391 K 391 K Sbjct: 211 K 211 >gi|182440605|ref|YP_001828324.1| putative ABC transporter permease protein [Streptomyces griseus subsp. griseus NBRC 13350] gi|326781279|ref|ZP_08240544.1| polar amino acid ABC transporter, inner membrane subunit [Streptomyces cf. griseus XylebKG-1] gi|178469121|dbj|BAG23641.1| putative ABC transporter permease protein [Streptomyces griseus subsp. griseus NBRC 13350] gi|326661612|gb|EGE46458.1| polar amino acid ABC transporter, inner membrane subunit [Streptomyces cf. griseus XylebKG-1] Length = 292 Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 48/182 (26%), Positives = 92/182 (50%), Gaps = 22/182 (12%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 + LPL+ ++FG+P AL+ + PVL +GG AL Sbjct: 129 RGLPLIICLLIVVFGVP-----ALRLEGVTTDPVL-----LGGG-----------ALVLT 167 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 +A++AE+ R+G+ +V Q AA +LGL+ +A R V+LPQA+R ++PPL + ++L K Sbjct: 168 YSAYVAEVFRAGIESVHPSQRAAARSLGLSGGQALRFVVLPQAVRRVVPPLLNDLVSLQK 227 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 ++ L G D V I ++ ++ + ++++L+I + + + A++ + Sbjct: 228 DTGLVSIAGAVDAVYAAQIIASKDFNYTPYVVAGL-VFVALTIPMTRLTDWVTARMDRRR 286 Query: 397 KK 398 + Sbjct: 287 AQ 288 >gi|238749809|ref|ZP_04611314.1| Arginine transport system permease protein artQ [Yersinia rohdei ATCC 43380] gi|238712464|gb|EEQ04677.1| Arginine transport system permease protein artQ [Yersinia rohdei ATCC 43380] Length = 238 Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 62/204 (30%), Positives = 106/204 (51%), Gaps = 18/204 (8%) Query: 191 VFSFVLGIVLS-LFA----TRLSRHFHEKTG-----KALPLLYISTFLIFGLPTLVLI-- 238 V + LG+VL+ LFA +RL + TG + LP + + F+ FG L+++ Sbjct: 19 VCALALGLVLAMLFAVCESSRLKVVSYLTTGWVTILRGLPEILVVLFIYFGSSQLLMMLS 78 Query: 239 -ALKYQLH-FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296 L+ F+ P+ + N I VSP F+ IAL+ +A+ ++ +R L AVP GQ Sbjct: 79 DGFTLNLYLFELPI--KLN-IDNFEVSP-FLCGVIALALLYSAYASQTLRGALKAVPVGQ 134 Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356 E+ ALGL+ +++PQ R +P L +Q+L LLK+++L + DL+ +I Sbjct: 135 WESGQALGLSQAAIFFRLIMPQMWRHALPGLGNQWLVLLKDTALVSLISVNDLMLQTKSI 194 Query: 357 INQTGQAIEIILIWMFIYLSLSIM 380 +T + +I IYL ++++ Sbjct: 195 ATRTQEPFTWYMIAAAIYLVVTLL 218 >gi|213691640|ref|YP_002322226.1| polar amino acid ABC transporter, inner membrane subunit [Bifidobacterium longum subsp. infantis ATCC 15697] gi|213523101|gb|ACJ51848.1| polar amino acid ABC transporter, inner membrane subunit [Bifidobacterium longum subsp. infantis ATCC 15697] gi|320457727|dbj|BAJ68348.1| amino acid ABC transporter permease component [Bifidobacterium longum subsp. infantis ATCC 15697] Length = 219 Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 53/188 (28%), Positives = 87/188 (46%), Gaps = 25/188 (13%) Query: 204 ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVS 263 A ++ R + E + + PLL FL FGLP L ++ + + F+GGS Sbjct: 51 ARQIVRIYIELS-RNTPLLVQLYFLYFGLPKLGVV-----WSAETCAIVGLGFLGGS--- 101 Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 ++AE +R GL AVP Q E A LGLT + V+LPQA+ + Sbjct: 102 ----------------YMAEAMRGGLEAVPNVQRETAYVLGLTSTQTITRVILPQAVSTA 145 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 IP + + + L K SS+ A+ AD++ + +I E + + + YL + + I++ Sbjct: 146 IPGVVANVIFLFKESSVVSAIALADVMYMAKDLIGMYYSTYESLFMLIVAYLVILLPISI 205 Query: 384 FMNRLNAK 391 F L + Sbjct: 206 FGTWLERR 213 >gi|209695419|ref|YP_002263348.1| arginine/ornithine periplasmic binding protein-dependent transporter, inner membrane component [Aliivibrio salmonicida LFI1238] gi|208009371|emb|CAQ79644.1| arginine/ornithine periplasmic binding protein-dependent transporter, inner membrane component [Aliivibrio salmonicida LFI1238] Length = 246 Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 56/231 (24%), Positives = 106/231 (45%), Gaps = 30/231 (12%) Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY---QL 244 ++ + S +L + L + L++ + +++ +Y T ++ G+P LVL+ L + Q+ Sbjct: 20 QVALLSLILAVFLGMLGA-LAKLAPYRWARSIATVY--TTVVRGIPDLVLMMLLFFGGQM 76 Query: 245 HFDKPVLGQFNFIGGSTVSPE-------FMSLYIALSCYTA----------AFIAEIVRS 287 + + +I S + ++ YI +S + A A++AE R Sbjct: 77 LLNNGLYESNEWINEWMTSSDPNHEWVAYLPDYIEISPFIAGVLTIGFIFGAYMAETFRG 136 Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347 ++AV RG+MEAA A G++ A R +L PQ +R +P + +L LLK ++L +G Sbjct: 137 AIMAVDRGEMEAAKAYGMSGPMAFRRILFPQMIRHALPGFGNNWLVLLKTTALVSIIGLE 196 Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 D+V V T Y++++ + LF + L E+K Sbjct: 197 DMVRVSSMAAGTTKMPFT-------FYMTVACIFLLFTAVSTGALKLVERK 240 >gi|13475817|ref|NP_107387.1| ABC transporter, permease protein [Mesorhizobium loti MAFF303099] gi|14026576|dbj|BAB53173.1| ABC transporter, permease protein [Mesorhizobium loti MAFF303099] Length = 233 Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 42/125 (33%), Positives = 66/125 (52%), Gaps = 9/125 (7%) Query: 231 GLPTLVLIALKY-----QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285 G+P L+ I L Y L + G F+G P F + +A+ + A+ E+ Sbjct: 64 GVPDLLTIYLLYYGGSIALTQIGTLFGSDGFVG----LPTFATGVLAIGIISGAYQGEVY 119 Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345 R AV RGQ EA ALGL+ ++ RLV++PQ MR +P L + + +LK+S+L +G Sbjct: 120 RGAYQAVDRGQFEACKALGLSRYQSLRLVIVPQLMRHALPGLGNVWQLVLKDSALISVIG 179 Query: 346 FADLV 350 +L+ Sbjct: 180 LVELM 184 Score = 38.9 bits (89), Expect = 1.6, Method: Compositional matrix adjust. Identities = 15/32 (46%), Positives = 22/32 (68%) Query: 118 RLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 RLS+ ++ AW+ VY VFR +P L+ I+ LY Sbjct: 44 RLSSRRVPAWLAHVYGTVFRGVPDLLTIYLLY 75 >gi|331267077|ref|YP_004326707.1| ABC transporter, membrane-spanning permease-amino acid transport [Streptococcus oralis Uo5] gi|326683749|emb|CBZ01367.1| ABC transporter, membrane-spanning permease-amino acid transport [Streptococcus oralis Uo5] Length = 240 Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 59/214 (27%), Positives = 104/214 (48%), Gaps = 9/214 (4%) Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248 I + + VL + +LF L + + + ++ L+Y++ I P ++LI Y L Sbjct: 23 IMIVAMVLSFLPALFLA-LGQIYKVRGVRSFSLVYLA--FIRATPPILLILFFYSLF--P 77 Query: 249 PVLGQF-NFIGGSTVSPEFMSLYIALSCY---TAAFIAEIVRSGLIAVPRGQMEAAIALG 304 +L QF IG + LY A Y T ++EI+RS ++ V +GQ+EAA A+G Sbjct: 78 SLLNQFLKSIGSDFDIFKLDPLYYAFIIYSLMTVGSLSEILRSAILTVDKGQLEAAHAIG 137 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364 LT +A ++ PQA+RS +P L + +N++K +SL + D+ ++ + Q Sbjct: 138 LTTTQAYLRIVFPQALRSALPNLANLVINIVKGTSLVFVMTIKDITAIARVEASYGYQYF 197 Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 E + Y+ + +I + L KEK+ Sbjct: 198 ESYFVIFLQYILICGLIQWGFSVLEKGYVKKEKR 231 >gi|323698678|ref|ZP_08110590.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio sp. ND132] gi|323458610|gb|EGB14475.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio desulfuricans ND132] Length = 218 Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 38/120 (31%), Positives = 67/120 (55%), Gaps = 7/120 (5%) Query: 247 DKPVLGQ----FNFIG--GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300 D P+L Q F +G G +SP ++ + L+ +T+A++AEI R + ++ GQ EA Sbjct: 62 DTPLLMQLFLIFFGVGLLGFDISP-LITAALGLTLFTSAYLAEIWRGCVESIANGQWEAG 120 Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 +L L+ + R V+LPQA+R +PP + ++K +++ +GF ++ G I N T Sbjct: 121 ESLALSRWQQLRFVILPQAVRIAVPPTVGFSVQVVKGTAVTSIIGFMEITKTGSMISNAT 180 >gi|260550582|ref|ZP_05824791.1| amino acid ABC transporter membrane protein [Acinetobacter sp. RUH2624] gi|299770573|ref|YP_003732599.1| ABC-type amino acid transport system, permease component [Acinetobacter sp. DR1] gi|260406293|gb|EEW99776.1| amino acid ABC transporter membrane protein [Acinetobacter sp. RUH2624] gi|298700661|gb|ADI91226.1| ABC-type amino acid transport system, permease component [Acinetobacter sp. DR1] Length = 221 Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 49/181 (27%), Positives = 96/181 (53%), Gaps = 21/181 (11%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 KAL LY+ I +P LVL+ + Y F F + + +F ++++ + + Sbjct: 52 KALCRLYLEAIRI--IPILVLLFVFY-----------FGF--ATWFNWQFSAMWVCVVVF 96 Query: 277 T---AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333 A + ++VR+ + ++ + Q ++A ALGLTH +A V+ PQ+++ + P + + Sbjct: 97 VLWGTAEMGDLVRAAITSIDQHQRDSAYALGLTHVQALVYVIFPQSLKRVTPGAINLFTR 156 Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM--FIYLSLSIMIALFMNRLNAK 391 ++K SSLAV +G +++ VG II + + +W+ FI++ L +I ++RL A Sbjct: 157 MVKTSSLAVLIGVVEVIKVGQQIIENSLLTVPSASLWIYGFIFI-LYFLICYPLSRLAAH 215 Query: 392 I 392 + Sbjct: 216 L 216 Score = 38.5 bits (88), Expect = 1.7, Method: Compositional matrix adjust. Identities = 24/71 (33%), Positives = 38/71 (53%) Query: 79 YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138 Y +S+ ++ G T +AF + + I GT+ G S N +V +CR+Y+E R Sbjct: 5 YLFQASHLERLMWGLWATAKIAFISVFFSAIFGTVFGVIMTSKNIVVKALCRLYLEAIRI 64 Query: 139 IPPLVVIFFLY 149 IP LV++F Y Sbjct: 65 IPILVLLFVFY 75 >gi|330900967|gb|EGH32386.1| amino acid ABC transporter permease [Pseudomonas syringae pv. japonica str. M301072PT] gi|330980616|gb|EGH78719.1| amino acid ABC transporter permease [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 231 Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 49/180 (27%), Positives = 87/180 (48%), Gaps = 23/180 (12%) Query: 214 KTGKALPLLYI-STF--LIFGLPTLVLIALKY----------QLHFDKPVLGQFNFIGGS 260 KT PL ++ ST+ L+ G+P L+ + L Y FD P L F G Sbjct: 41 KTSPYKPLQWLGSTYSTLVRGIPELLWVLLIYFGTVNGMRALGKLFDIPDLALSAFAAG- 99 Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320 IAL A+ E+ R ++A+P+G EA +ALG++ + ++LPQ Sbjct: 100 ---------VIALGICFGAYATEVFRGAILAIPKGHREAGLALGMSRSRILFKLVLPQMW 150 Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380 R +P L + ++ L+K+++L +G +++ + T QA ++ F+YL L+++ Sbjct: 151 RIALPGLGNLFMILMKDTALVSVIGLEEIMRHAQIAVGFTKQAFTFYMVAAFMYLGLTVL 210 >gi|225570417|ref|ZP_03779442.1| hypothetical protein CLOHYLEM_06517 [Clostridium hylemonae DSM 15053] gi|225160788|gb|EEG73407.1| hypothetical protein CLOHYLEM_06517 [Clostridium hylemonae DSM 15053] Length = 216 Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 55/213 (25%), Positives = 105/213 (49%), Gaps = 19/213 (8%) Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240 ++++ A +FS LG+++S R+SR K + + LYIS ++ G P ++ + + Sbjct: 16 VSIEIFAATLIFSLPLGLIVSF--GRMSRI---KPVQWITKLYIS--IMRGTPLMLQLMV 68 Query: 241 KYQLHFDKPVLGQFNFIGGS-TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299 Y G + G + + ++ I + AA+ AEI R G+ ++ GQ EA Sbjct: 69 VY--------YGPYYLFGMRISATYRMTAVLIGFAINYAAYFAEIYRGGIESISEGQYEA 120 Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359 A LG T + ++LPQ M+ I+P +T++ + L+K++SLA V ++ + I Sbjct: 121 ARVLGYTRPQTFFRIILPQVMKRILPSVTNEVITLVKDTSLAFVVAVPEMFTTAKQIAAA 180 Query: 360 TGQAIEIILIWMFIY---LSLSIMIALFMNRLN 389 + +F Y L +++++ N+LN Sbjct: 181 QTSMTAFVAAGIFYYVFNLVVAVVMEAIENKLN 213 >gi|222106504|ref|YP_002547295.1| ABC transporter membrane spanning protein (amino acid) [Agrobacterium vitis S4] gi|221737683|gb|ACM38579.1| ABC transporter membrane spanning protein (amino acid) [Agrobacterium vitis S4] Length = 222 Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 35/108 (32%), Positives = 62/108 (57%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +AL A+ EI+R G+ ++ +GQ+EA +ALGL + R ++L A+R++ P LTSQ Sbjct: 95 VALGLNGGAYAIEIIRGGVDSIGKGQVEAGLALGLHRAQILRHIILKPALRAVYPSLTSQ 154 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378 ++ L +S+ ++ +L SV I T ++ E+ +YL +S Sbjct: 155 FVMLTLTTSVCTSIAAYELTSVAQKIEADTFRSFEVYFSITLLYLVIS 202 >gi|66048137|ref|YP_237978.1| amino acid ABC transporter permease [Pseudomonas syringae pv. syringae B728a] gi|302187472|ref|ZP_07264145.1| amino acid ABC transporter permease [Pseudomonas syringae pv. syringae 642] gi|63258844|gb|AAY39940.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Pseudomonas syringae pv. syringae B728a] gi|330939295|gb|EGH42690.1| amino acid ABC transporter permease [Pseudomonas syringae pv. pisi str. 1704B] gi|330970705|gb|EGH70771.1| amino acid ABC transporter permease [Pseudomonas syringae pv. aceris str. M302273PT] Length = 231 Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 49/180 (27%), Positives = 87/180 (48%), Gaps = 23/180 (12%) Query: 214 KTGKALPLLYI-STF--LIFGLPTLVLIALKY----------QLHFDKPVLGQFNFIGGS 260 KT PL ++ ST+ L+ G+P L+ + L Y FD P L F G Sbjct: 41 KTSPYKPLQWLGSTYSTLVRGIPELLWVLLIYFGTVNGMRALGKLFDIPDLALSAFAAG- 99 Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320 IAL A+ E+ R ++A+P+G EA +ALG++ + ++LPQ Sbjct: 100 ---------VIALGICFGAYATEVFRGAILAIPKGHREAGLALGMSRSRILFKLVLPQMW 150 Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380 R +P L + ++ L+K+++L +G +++ + T QA ++ F+YL L+++ Sbjct: 151 RIALPGLGNLFMILMKDTALVSVIGLEEIMRHAQIAVGFTKQAFTFYMVAAFMYLGLTVL 210 >gi|224367458|ref|YP_002601621.1| GlnP1 [Desulfobacterium autotrophicum HRM2] gi|223690174|gb|ACN13457.1| GlnP1 [Desulfobacterium autotrophicum HRM2] Length = 221 Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 62/205 (30%), Positives = 100/205 (48%), Gaps = 21/205 (10%) Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232 NRGL L + V S + G+V+ + A + R F KT + Y + F G Sbjct: 17 NRGLGMSLL-------LIVPSALGGVVIGITAGAI-RAFGSKTSARIGDGYAALFR--GT 66 Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292 P +V + + L+F P +G + SP + ++ + C + A+ +E VR L+++ Sbjct: 67 PLVVQL---FVLYFGLPNIGIY-------FSPYWAAVTGFILC-SGAYQSEYVRGALLSI 115 Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352 + Q AA ALG T + V++PQAMR +P ++ + L+K SSLA V F +L Sbjct: 116 RKNQYLAAEALGFTRIQTLVWVIIPQAMRRALPGCGNEIVYLIKYSSLAYVVTFMELTGE 175 Query: 353 GGTIINQTGQAIEIILIWMFIYLSL 377 G TI + + E+ L+ YL L Sbjct: 176 GKTIATEYFRFTEVFLVIGCYYLVL 200 >gi|209515705|ref|ZP_03264569.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. H160] gi|209503941|gb|EEA03933.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. H160] Length = 219 Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 34/104 (32%), Positives = 62/104 (59%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IALS AA+++E +R ++ + +GQ A+ +LGL+ R+ R V+ PQA+R +P L++ Sbjct: 92 IALSANVAAYLSESMRGAILGIHQGQWLASYSLGLSRRQTLRYVIAPQALRIAVPSLSNS 151 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374 ++L+K++SL + +L+ II T Q + + L +Y Sbjct: 152 LISLIKDTSLVSVITVTELLRSAQEIIASTYQPLPLYLAAAAVY 195 >gi|184157759|ref|YP_001846098.1| amino acid ABC transporter permease [Acinetobacter baumannii ACICU] gi|294842165|ref|ZP_06786848.1| ABC-type amino acid transport system, permease component [Acinetobacter sp. 6014059] gi|183209353|gb|ACC56751.1| ABC-type amino acid transport system, permease component [Acinetobacter baumannii ACICU] gi|322508069|gb|ADX03523.1| ArtM protein [Acinetobacter baumannii 1656-2] gi|323517651|gb|ADX92032.1| ABC-type amino acid transport system, permease component [Acinetobacter baumannii TCDC-AB0715] Length = 221 Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 49/181 (27%), Positives = 96/181 (53%), Gaps = 21/181 (11%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 KAL LY+ I +P LVL+ + Y F F + + +F ++++ + + Sbjct: 52 KALCRLYLEAIRI--IPILVLLFVFY-----------FGF--ATWFNWQFSAMWVCIVVF 96 Query: 277 T---AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333 A + ++VR+ + ++ + Q ++A ALGLTH +A V+ PQ+++ + P + + Sbjct: 97 VLWGTAEMGDLVRAAITSIDQHQRDSAYALGLTHVQALIYVIFPQSLKRVTPGAINLFTR 156 Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM--FIYLSLSIMIALFMNRLNAK 391 ++K SSLAV +G +++ VG II + + +W+ FI++ L +I ++RL A Sbjct: 157 MVKTSSLAVLIGVVEVIKVGQQIIENSLLTVPSASLWIYGFIFI-LYFLICYPLSRLAAH 215 Query: 392 I 392 + Sbjct: 216 L 216 Score = 38.9 bits (89), Expect = 1.6, Method: Compositional matrix adjust. Identities = 24/71 (33%), Positives = 38/71 (53%) Query: 79 YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138 Y +S+ ++ G T +AF + + I GT+ G S N +V +CR+Y+E R Sbjct: 5 YLFQASHLERLMWGLWATAKIAFISVFFSAIFGTVFGVIMTSKNIVVKALCRLYLEAIRI 64 Query: 139 IPPLVVIFFLY 149 IP LV++F Y Sbjct: 65 IPILVLLFVFY 75 >gi|317406070|gb|EFV86334.1| polar amino acid ABC transporter [Achromobacter xylosoxidans C54] Length = 272 Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 47/184 (25%), Positives = 84/184 (45%), Gaps = 8/184 (4%) Query: 186 NAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH 245 N +I V + LG L L LS + PL ++ + ++ L Y Sbjct: 68 NVQISVLAMALGTALGLVVGALS------LSPSRPLRRLTRAYVLAFRNAPILVLVYFTT 121 Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305 + P + N G + P+++ + I L +A +AEI R + ++P Q EAA +L Sbjct: 122 YVFPF--ELNLGGWNLPFPDWIKVVIGLGLPASANVAEIFRGAIQSIPEAQWEAAQSLAF 179 Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365 + R+++LPQ +R ++P + Y ++ ++SLA VG DLV N ++ Sbjct: 180 RRAQIFRMIVLPQCVRRMLPSWMNLYASITMSTSLASLVGVHDLVDTATVASNTVARSDF 239 Query: 366 IILI 369 +L+ Sbjct: 240 TVLV 243 >gi|222106269|ref|YP_002547060.1| ABC transporter membrane spanning protein (amino acid) [Agrobacterium vitis S4] gi|221737448|gb|ACM38344.1| ABC transporter membrane spanning protein (amino acid) [Agrobacterium vitis S4] Length = 260 Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 40/120 (33%), Positives = 66/120 (55%), Gaps = 9/120 (7%) Query: 233 PTLVLI-ALKYQLHFDKPVLGQF-NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290 P LVLI A Y F+ V G + +F P+++ + L+ +A+IAEI R ++ Sbjct: 100 PHLVLIFATTYIFPFEIIVFGNYLSF-------PDWVKAMVGLAIPASAYIAEITRGAIL 152 Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 ++P Q EAA LG + +A R ++LPQ +R +PP + ++ +SLA VG +L+ Sbjct: 153 SIPTAQWEAAQGLGFSRWQALRWIILPQCLRRSLPPWMNVLASITMGTSLASLVGVHELL 212 Score = 38.5 bits (88), Expect = 1.9, Method: Compositional matrix adjust. Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 13/88 (14%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151 GF ++ S M +++G L+G ++ +LV + VYV+VFRN P LV+IF Sbjct: 52 GFAMNIVISLSAMTLGSVLGILLGMLQMVPFRLVRYPAAVYVQVFRNAPHLVLIF----- 106 Query: 152 VLSVLPIPDHSIVLPFGMFLNNRGLSFP 179 + + PF + + LSFP Sbjct: 107 --------ATTYIFPFEIIVFGNYLSFP 126 >gi|170701276|ref|ZP_02892242.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria IOP40-10] gi|172064906|ref|YP_001815618.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria MC40-6] gi|170133799|gb|EDT02161.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria IOP40-10] gi|171997148|gb|ACB68065.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria MC40-6] Length = 240 Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 52/197 (26%), Positives = 97/197 (49%), Gaps = 12/197 (6%) Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL----GQFNFIGGST 261 +LSRH ++ + L LY + F G+P L++I Y +F L GQ+ G Sbjct: 47 KLSRH---RSARLLGDLYTTVFR--GVPELLVI---YLFYFGGSTLVTTVGQWFGAEGFI 98 Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321 P F+ +A+ + A+ AE+ R+ ++AV +G++EAA ++G+ R +L+PQ +R Sbjct: 99 GVPPFVIGALAVGMISGAYQAEVYRAAVLAVSKGELEAARSIGMPRAMVLRRILVPQVLR 158 Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 +P + + + LK+S+L G A+L+ + T Q + +YL ++ + Sbjct: 159 FALPGIGNVWQLSLKDSALISVTGLAELLRTSQIAASSTHQYFVFFVAGGALYLVMTGLS 218 Query: 382 ALFMNRLNAKIALKEKK 398 NR A + ++ Sbjct: 219 NRVFNRAEAIVGRSFRR 235 >gi|116513423|ref|YP_812329.1| ABC-type amino acid transport system, permease [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|161507577|ref|YP_001577531.1| amino acid ABC transporter permease protein [Lactobacillus helveticus DPC 4571] gi|260101516|ref|ZP_05751753.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus helveticus DSM 20075] gi|116092738|gb|ABJ57891.1| amino acid ABC transporter membrane protein 2, PAAT family [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|160348566|gb|ABX27240.1| amino acid ABC transporter permease protein [Lactobacillus helveticus DPC 4571] gi|260084659|gb|EEW68779.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus helveticus DSM 20075] gi|325125053|gb|ADY84383.1| ABC transporter [Lactobacillus delbrueckii subsp. bulgaricus 2038] gi|328466383|gb|EGF37535.1| amino acid ABC transporter permease [Lactobacillus helveticus MTCC 5463] Length = 224 Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 43/151 (28%), Positives = 79/151 (52%), Gaps = 12/151 (7%) Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281 +Y+ F I +PT+VL+ Y +++ P N+ P +A S + AA Sbjct: 60 IYLEFFRI--VPTIVLL---YLVYYILPRTFHVNW-------PATWMAVLAFSLWVAAEF 107 Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341 ++IVR + +VP+ Q E+ +ALGL+ + R VLLPQA++ +P + ++K +SL Sbjct: 108 SDIVRGAIESVPKSQRESGLALGLSKIQLFRYVLLPQAVKLELPATINLATRVIKTTSLL 167 Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMF 372 + + ++++VG II Q + W++ Sbjct: 168 LVISIMEVINVGQQIIEANNQQYPTGVFWVY 198 Score = 43.1 bits (100), Expect = 0.079, Method: Compositional matrix adjust. Identities = 23/78 (29%), Positives = 44/78 (56%), Gaps = 1/78 (1%) Query: 72 IDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRV 131 + GI S++A ++ G + W+A +I IGT+ G R NK++ ++ R+ Sbjct: 2 VHSGINVLFEGSNFAR-LMAGLWTSIWIAAISLIIGLAIGTIFGILRTLTNKIIRFVLRI 60 Query: 132 YVEVFRNIPPLVVIFFLY 149 Y+E FR +P +V+++ +Y Sbjct: 61 YLEFFRIVPTIVLLYLVY 78 >gi|301793798|emb|CBW36189.1| putative amino acid ABC transporter, permease protein [Streptococcus pneumoniae INV104] Length = 219 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 28/73 (38%), Positives = 50/73 (68%) Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 A + +T+A +AEI+R GL V +GQ EA ++ G T + ++LPQA+R ++P + SQ+ Sbjct: 90 AFTLFTSAALAEIIRGGLNTVDKGQYEAGMSQGFTSAQILYYIILPQAIRKMLPAIISQF 149 Query: 332 LNLLKNSSLAVAV 344 + ++K++SL +V Sbjct: 150 VTVIKDTSLLYSV 162 Score = 38.9 bits (89), Expect = 1.5, Method: Compositional matrix adjust. Identities = 21/61 (34%), Positives = 36/61 (59%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 I GF T +++ +I +TIIGT++ R N ++ I +Y+E RN+P L+ IF + Sbjct: 16 IFKGFGLTLYISLIAIILSTIIGTVLAVMRNGKNPVLRIISSIYIEFVRNVPNLLWIFTI 75 Query: 149 Y 149 + Sbjct: 76 F 76 >gi|258545835|ref|ZP_05706069.1| arginine ABC superfamily ATP binding cassette transporter, permease protein [Cardiobacterium hominis ATCC 15826] gi|258518851|gb|EEV87710.1| arginine ABC superfamily ATP binding cassette transporter, permease protein [Cardiobacterium hominis ATCC 15826] Length = 238 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 28/75 (37%), Positives = 47/75 (62%) Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 A++AE R G +A+P+GQ+EAA A GL+ + + PQ +R +P L + +L L+KN Sbjct: 110 GAYMAESFRGGFLAIPKGQIEAARAYGLSRKSIFWRISWPQMLRYALPSLGNNWLVLMKN 169 Query: 338 SSLAVAVGFADLVSV 352 ++L +G D+V + Sbjct: 170 TALVSIIGLQDIVRI 184 >gi|104773437|ref|YP_618417.1| amino acid ABC transporter permease [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|103422518|emb|CAI97092.1| Amino acid ABC transporter, permease protein [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] Length = 230 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 43/151 (28%), Positives = 79/151 (52%), Gaps = 12/151 (7%) Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281 +Y+ F I +PT+VL+ Y +++ P N+ P +A S + AA Sbjct: 66 IYLEFFRI--VPTIVLL---YLVYYILPRTFHVNW-------PATWMAVLAFSLWVAAEF 113 Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341 ++IVR + +VP+ Q E+ +ALGL+ + R VLLPQA++ +P + ++K +SL Sbjct: 114 SDIVRGAIESVPKSQRESGLALGLSKIQLFRYVLLPQAVKLELPATINLATRVIKTTSLL 173 Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMF 372 + + ++++VG II Q + W++ Sbjct: 174 LVISIMEVINVGQQIIEANNQQYPTGVFWVY 204 Score = 43.1 bits (100), Expect = 0.074, Method: Compositional matrix adjust. Identities = 23/78 (29%), Positives = 44/78 (56%), Gaps = 1/78 (1%) Query: 72 IDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRV 131 + GI S++A ++ G + W+A +I IGT+ G R NK++ ++ R+ Sbjct: 8 VHSGINVLFEGSNFAR-LMAGLWTSIWIAAISLIIGLAIGTIFGILRTLTNKIIRFVLRI 66 Query: 132 YVEVFRNIPPLVVIFFLY 149 Y+E FR +P +V+++ +Y Sbjct: 67 YLEFFRIVPTIVLLYLVY 84 >gi|308185788|ref|YP_003929919.1| ABC transport system, permease protein [Pantoea vagans C9-1] gi|308056298|gb|ADO08470.1| putative ABC transport system, permease protein [Pantoea vagans C9-1] Length = 219 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 37/108 (34%), Positives = 62/108 (57%), Gaps = 1/108 (0%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G V+P + + +AL+ YT+AF+ +I + A+P+GQ EA+ LGLT + V+ PQ Sbjct: 81 GIDVAP-WTAASLALTFYTSAFLVDIWYGSIRALPKGQWEASRCLGLTFGQTLWRVVAPQ 139 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 A+R I P + ++K ++LA +GF +L G + N T Q ++ Sbjct: 140 AIRIGIAPTVGFAVQVIKGTALASIIGFIELTKAGTILNNVTYQPFKV 187 >gi|149907743|ref|ZP_01896490.1| arginine ABC transporter, permease protein [Moritella sp. PE36] gi|149809413|gb|EDM69342.1| arginine ABC transporter, permease protein [Moritella sp. PE36] Length = 221 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 63/214 (29%), Positives = 106/214 (49%), Gaps = 16/214 (7%) Query: 183 MDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF-GLPTLVLIALK 241 + T +I FS + G S+ A L+ K L LL + L+F G P L+ I L Sbjct: 13 LSTTLEITFFSLLFG---SMIAVLLTLAMINKI-PGLNLLARAIILVFTGTPLLIQIFLV 68 Query: 242 YQLHFDKPVLGQFNFIGGS----TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQM 297 Y P QF +I S + + IALS TAA+ + + + + +VPRG+ Sbjct: 69 Y----SGP--SQFEWIKDSFLWDYLRQAKICAIIALSFNTAAYSSLLFKGAIESVPRGEW 122 Query: 298 EAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII 357 +A ALG+ +R+ T V++P A+R ++P +++ + +LK +SLA ++ D++ I Sbjct: 123 DACNALGM-NRRQTLAVIVPHAIRRVLPSYSNEVILVLKGTSLASSITIMDVMGYANQIN 181 Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 QT A+ IYL ++ ++ L +L K Sbjct: 182 GQTYDALMAFSAAGIIYLGMNGILILIFKQLEKK 215 >gi|21221279|ref|NP_627058.1| amino acid ABC transporter transmembrane protein [Streptomyces coelicolor A3(2)] gi|256787536|ref|ZP_05525967.1| amino acid ABC transporter transmembrane protein [Streptomyces lividans TK24] gi|289771431|ref|ZP_06530809.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Streptomyces lividans TK24] gi|6689162|emb|CAB65559.1| probable amino acid ABC transporter protein, integral membrane component [Streptomyces coelicolor A3(2)] gi|289701630|gb|EFD69059.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Streptomyces lividans TK24] Length = 233 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 39/122 (31%), Positives = 62/122 (50%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +AL A+ +EIVR L AV Q E IAL T + +L+LLPQA+ +IPP ++ Sbjct: 88 LALGLTYGAYGSEIVRGSLAAVDPAQKEGGIALSFTPWQRMKLILLPQAVPEMIPPFSNL 147 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 + LLK ++L +G DL + ++ EI + IY ++ ++ M L Sbjct: 148 LIELLKGTALVSIMGMGDLAFSANLVRLALQESAEIYTYVLLIYFVIAFLLTRVMRGLEK 207 Query: 391 KI 392 K+ Sbjct: 208 KL 209 >gi|330505509|ref|YP_004382378.1| polar amino acid ABC transporter inner membrane subunit [Pseudomonas mendocina NK-01] gi|328919795|gb|AEB60626.1| polar amino acid ABC transporter, inner membrane subunit [Pseudomonas mendocina NK-01] Length = 231 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 48/182 (26%), Positives = 92/182 (50%), Gaps = 5/182 (2%) Query: 214 KTGKALPLLYIS---TFLIFGLPTLVLIALKYQLHFDK-PVLGQFNFIGGSTVSPEFMSL 269 KT PL ++ + ++ G+P L+ + L Y + LG+ +G +SP F + Sbjct: 41 KTSPYKPLQWLGGSYSTIVRGVPELLWVLLIYFSTVNVLRALGESLGVGSLELSP-FAAG 99 Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329 IAL A+ E+ R ++A+P+G EA ALG++ + +++PQ R +P L + Sbjct: 100 VIALGLCFGAYATEVFRGAILAIPKGHREAGQALGMSKGRILWKLIMPQMWRIALPGLGN 159 Query: 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 ++ L+K+++L VG +++ + T + L+ IYL L+I+ + ++ L Sbjct: 160 LFMILMKDTALVSVVGLTEIMRQAQIAVTATKNPMTFFLVAAIIYLGLTIIAMIGLHFLE 219 Query: 390 AK 391 K Sbjct: 220 KK 221 >gi|239503578|ref|ZP_04662888.1| ABC-type amino acid transport system, permease component [Acinetobacter baumannii AB900] Length = 221 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 49/181 (27%), Positives = 96/181 (53%), Gaps = 21/181 (11%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 KAL LY+ I +P LVL+ + Y F F + + +F ++++ + + Sbjct: 52 KALCRLYLEAIRI--IPILVLLFVFY-----------FGF--ATWFNWQFSAMWVCVVVF 96 Query: 277 T---AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333 A + ++VR+ + ++ + Q ++A ALGLTH +A V+ PQ+++ + P + + Sbjct: 97 VLWGTAEMGDLVRAAITSIDQHQRDSAYALGLTHVQALVYVIFPQSLKRVTPGAINLFTR 156 Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM--FIYLSLSIMIALFMNRLNAK 391 ++K SSLAV +G +++ VG II + + +W+ FI++ L +I ++RL A Sbjct: 157 MVKTSSLAVLIGVVEVIKVGQQIIENSLLTVPSASLWIYGFIFI-LYFLICYPLSRLAAH 215 Query: 392 I 392 + Sbjct: 216 L 216 Score = 38.5 bits (88), Expect = 1.8, Method: Compositional matrix adjust. Identities = 24/71 (33%), Positives = 38/71 (53%) Query: 79 YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138 Y +S+ ++ G T +AF + + I GT+ G S N +V +CR+Y+E R Sbjct: 5 YLFQASHLERLMWGLWATAKIAFISVFFSAIFGTVFGVIMTSKNIVVKALCRLYLEAIRI 64 Query: 139 IPPLVVIFFLY 149 IP LV++F Y Sbjct: 65 IPILVLLFVFY 75 >gi|167561989|ref|ZP_02354905.1| histidine ABC transporter, permease protein HisQ [Burkholderia oklahomensis EO147] Length = 229 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 51/163 (31%), Positives = 88/163 (53%), Gaps = 15/163 (9%) Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY---QLHFDKP 249 SF+LG+V + A +LS++ + + LY T LI G+P LVL+ L + Q+ ++ Sbjct: 28 SFLLGLVGA--AAKLSKN---RLSSGIGTLY--TTLIRGVPDLVLMLLLFYSLQIWLNQL 80 Query: 250 V-LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308 L +N I + P F + + L A+ E R ++VPRGQ+EA A G+T+ Sbjct: 81 TDLMNWNQI---DIDP-FAAGVLVLGFIYGAYFTETFRGAFLSVPRGQLEAGSAYGMTNW 136 Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 + ++ PQ MR +P + + + L+K+++L +G AD+V Sbjct: 137 QVFARIMFPQMMRFALPGIGNNWQVLVKSTALVSIIGLADVVK 179 >gi|160894717|ref|ZP_02075492.1| hypothetical protein CLOL250_02268 [Clostridium sp. L2-50] gi|156863651|gb|EDO57082.1| hypothetical protein CLOL250_02268 [Clostridium sp. L2-50] Length = 228 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 49/185 (26%), Positives = 93/185 (50%), Gaps = 16/185 (8%) Query: 217 KALPLLYISTFLIF---GLPTLVLIALKY---QLHFDKPVLGQFNFIGGSTVSPEFMSLY 270 K PL Y+ F+++ G P ++ + + Y L F P+ G GG V+ +S Sbjct: 47 KFKPLSYLMKFIVWIVRGTPLMIQMLIIYYFPGLVFHNPIWGGGE--GGRFVAAS-VSFI 103 Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + +CY +EI R G+ +P GQ EA + LG+T R+ V L Q ++ I+P ++++ Sbjct: 104 VNYACY----FSEIYRGGIQGIPVGQEEAGLVLGMTPRQIFFKVKLLQMIKKIVPAMSNE 159 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQT---GQAIEIILIWMFIYLSLSIMIALFMNR 387 + L+K++SLA + +++ G + + AI + F YL + ++ + + + Sbjct: 160 IITLVKDTSLARIIALQEIIWAGQAFMKGSQGISGAIWPLFFCAFYYLIWNGVLTVLLGK 219 Query: 388 LNAKI 392 L K+ Sbjct: 220 LEKKL 224 >gi|238789650|ref|ZP_04633433.1| Arginine transport system permease protein artQ [Yersinia frederiksenii ATCC 33641] gi|238722203|gb|EEQ13860.1| Arginine transport system permease protein artQ [Yersinia frederiksenii ATCC 33641] Length = 238 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 62/204 (30%), Positives = 106/204 (51%), Gaps = 18/204 (8%) Query: 191 VFSFVLGIVLS-LFATRLSRHF----HEKTG-----KALPLLYISTFLIFGLPTLVLI-- 238 V + VLG+VL+ LFA S + + TG + LP + + F+ FG L+++ Sbjct: 19 VCALVLGLVLAMLFAVCESSRWKVVSYLTTGWVTILRGLPEILVVLFIYFGSSQLLMMLS 78 Query: 239 -ALKYQLH-FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296 L+ F+ P+ + N I VSP F+ IAL+ +A+ ++ +R L AVP GQ Sbjct: 79 DGFTLNLYLFELPI--KLN-IDDFEVSP-FLCGVIALALLYSAYASQTLRGALKAVPVGQ 134 Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356 E+ ALGL+ +++PQ R +P L +Q+L LLK+++L + DL+ +I Sbjct: 135 WESGQALGLSQAAIFFRLIMPQMWRHALPGLGNQWLVLLKDTALVSLISVNDLMLQTKSI 194 Query: 357 INQTGQAIEIILIWMFIYLSLSIM 380 +T + +I IYL ++++ Sbjct: 195 ATRTQEPFTWYVIAAAIYLLVTLL 218 >gi|57168604|ref|ZP_00367737.1| glutamine ABC transporter, permease protein (glnP) [Campylobacter coli RM2228] gi|305433022|ref|ZP_07402178.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Campylobacter coli JV20] gi|57020109|gb|EAL56786.1| glutamine ABC transporter, permease protein (glnP) [Campylobacter coli RM2228] gi|304443723|gb|EFM36380.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Campylobacter coli JV20] Length = 233 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 43/159 (27%), Positives = 77/159 (48%), Gaps = 11/159 (6%) Query: 198 IVLSLFATRLSRHFHE---KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK-PVLGQ 253 I++S F + F + + + PLL FL + LP K+ +H ++ P L Sbjct: 39 ILMSYFKITIMEAFCKVYIEFSRNTPLLIQLFFLYYALP-------KFDIHLEQIPPLNL 91 Query: 254 FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313 + P F + LS +++AE R+G A+ + Q EA ++LG T R Sbjct: 92 ICLSVDEALRPAFACAIVGLSFLGGSYMAESFRAGFEAIKKQQFEAGLSLGFTKLNNLRY 151 Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352 V++PQA+ +P +++ + L+K +S+ + DLV+V Sbjct: 152 VIMPQALGVCLPGISANIVFLIKETSVVSIIALPDLVTV 190 >gi|332161760|ref|YP_004298337.1| amino acid transport system permease protein [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|325665990|gb|ADZ42634.1| amino acid transport system permease protein [Yersinia enterocolitica subsp. palearctica 105.5R(r)] Length = 231 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 46/143 (32%), Positives = 73/143 (51%), Gaps = 10/143 (6%) Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVL--GQFNFIG-GSTVSPEFMSLYIALSCYTAAFIA 282 T L+ G+P LV++ L L F +L G F +G G F+S +A+ A+ Sbjct: 53 TTLVRGIPELVIMLL---LFFGGEMLVNGFFGLLGLGPVRFNTFVSGVLAIGIVFGAYYT 109 Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342 E R V RGQ+EAA+A G+ R+ ++LPQ + IP + + +L L+K S+L Sbjct: 110 ETFRGAFQTVERGQLEAAVAYGMRPRQVFWRIMLPQMLSFAIPGINNNWLGLMKASALIS 169 Query: 343 AVGFADLVSVGGTIINQTGQAIE 365 +G D+V + Q G+A + Sbjct: 170 ILGLEDMV----WLAEQAGRATQ 188 >gi|237665697|ref|ZP_04525685.1| polar amino acid ABC transporter, inner membrane subunit [Clostridium butyricum E4 str. BoNT E BL5262] gi|237658644|gb|EEP56196.1| polar amino acid ABC transporter, inner membrane subunit [Clostridium butyricum E4 str. BoNT E BL5262] Length = 225 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 30/90 (33%), Positives = 55/90 (61%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I + + AA + +IVR L ++P+ Q+E+ ALGL + + R +++PQA+R ++P + Sbjct: 97 IVFTLWGAAEMGDIVRGALQSLPKHQIESGKALGLNNFQLYRYIMIPQAVRRMLPGTINL 156 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 ++K +SL V +G D+V +G II + Sbjct: 157 ATRMVKTTSLVVLIGVIDVVKIGQQIIETS 186 >gi|167562881|ref|ZP_02355797.1| amino acid ABC transporter, permease protein [Burkholderia oklahomensis EO147] gi|167570068|ref|ZP_02362942.1| amino acid ABC transporter, permease protein [Burkholderia oklahomensis C6786] Length = 219 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 38/127 (29%), Positives = 69/127 (54%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IALS AA+++E +R + + +GQ AA +LGL+ R+ R V+ PQA+R +P L++ Sbjct: 92 IALSANVAAYMSESMRGAINGIDKGQWLAAYSLGLSWRQTLRYVIGPQALRIAVPSLSNS 151 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++L+K++SL + +L+ II T Q + + L +Y L ++ Sbjct: 152 LISLIKDTSLVSVITVTELLRSAQEIIASTYQPLPLYLAAAAVYWVLCQLLEWVQRWYER 211 Query: 391 KIALKEK 397 ++AL + Sbjct: 212 RLALPSR 218 >gi|217423525|ref|ZP_03455026.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Burkholderia pseudomallei 576] gi|217393383|gb|EEC33404.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Burkholderia pseudomallei 576] Length = 240 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 38/128 (29%), Positives = 69/128 (53%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IALS AA+++E +R + + +GQ AA +LGL+ R+ R V+ PQA+R +P L++ Sbjct: 113 IALSANVAAYMSESMRGAINGIDKGQWLAAYSLGLSWRQTLRYVIGPQALRIAVPSLSNS 172 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++L+K++SL + +L+ II T Q + + L +Y L ++ Sbjct: 173 LISLIKDTSLVSVITVTELLRSAQEIIASTYQPLPLYLAAAAVYWVLCQILEWVQRWYER 232 Query: 391 KIALKEKK 398 ++AL + Sbjct: 233 RLALPSRH 240 >gi|300716053|ref|YP_003740856.1| Arginine transport system permease protein [Erwinia billingiae Eb661] gi|299061889|emb|CAX59005.1| Arginine transport system permease protein [Erwinia billingiae Eb661] Length = 238 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 63/223 (28%), Positives = 113/223 (50%), Gaps = 22/223 (9%) Query: 191 VFSFVLGIVLSL-FATRLSRHFHE----KTG-----KALPLLYISTFLIFGLPTLVL-IA 239 V + V+G++L++ FA S + TG + LP + + F+ FG L+L ++ Sbjct: 19 VSALVVGLILAMIFAAWESARWRPVAWLGTGLVTLFRGLPEILVVLFVYFGASQLLLTLS 78 Query: 240 LKYQLHFDKPVLGQFNF-----IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294 + ++ LG F+F I VSP F+ IALS A++ ++ +R L AVP Sbjct: 79 DGFTVN-----LGLFSFPVQVNIQNFDVSP-FLCGVIALSILYASYASQTLRGALKAVPV 132 Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354 GQ E+ ALG+ ++LPQ R +P L +Q+L LLK+++L + D++ Sbjct: 133 GQWESGQALGMKTPAIFFRLILPQMWRHALPGLGNQWLVLLKDTALVSLISVNDIMLQTK 192 Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 +I +T + L+ IYL ++++ + R++A+ E+ Sbjct: 193 SIAARTQEPFTWYLMAAAIYLVITLLSQQVLKRIDARATRFEQ 235 >gi|148977575|ref|ZP_01814154.1| amino acid ABC transporter, permease protein [Vibrionales bacterium SWAT-3] gi|145963226|gb|EDK28493.1| amino acid ABC transporter, permease protein [Vibrionales bacterium SWAT-3] Length = 225 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 44/155 (28%), Positives = 79/155 (50%), Gaps = 7/155 (4%) Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290 G P LV QL+ + QF + G+ + +A T+A+ AEI+R + Sbjct: 62 GTPLLV------QLYLIYYGMDQFFPVKGTLWENAWFCALVAFILNTSAYTAEIIRGAIN 115 Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 +P+G++EAA A G++ K R ++LP A+R +P +++ + +L S++A V DL Sbjct: 116 GLPKGEVEAAKAYGMSTSKTYRRIILPSALRRALPAYSNEVIFMLHGSAVAGIVTIMDLT 175 Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLS-IMIALF 384 + ++ E L Y++L+ I+IA+F Sbjct: 176 GAARLVNSRYYAPFESFLTAGLFYMALTFIIIAIF 210 >gi|53719481|ref|YP_108467.1| putative ABC transporter membrane protein [Burkholderia pseudomallei K96243] gi|53723465|ref|YP_102926.1| amino acid ABC transporter permease [Burkholderia mallei ATCC 23344] gi|121598882|ref|YP_993060.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Burkholderia mallei SAVP1] gi|126441429|ref|YP_001058844.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Burkholderia pseudomallei 668] gi|126449548|ref|YP_001080332.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Burkholderia mallei NCTC 10247] gi|126452898|ref|YP_001066090.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Burkholderia pseudomallei 1106a] gi|167719754|ref|ZP_02402990.1| amino acid ABC transporter, permease protein [Burkholderia pseudomallei DM98] gi|167738749|ref|ZP_02411523.1| amino acid ABC transporter, permease protein [Burkholderia pseudomallei 14] gi|167815973|ref|ZP_02447653.1| amino acid ABC transporter, permease protein [Burkholderia pseudomallei 91] gi|167824346|ref|ZP_02455817.1| amino acid ABC transporter, permease protein [Burkholderia pseudomallei 9] gi|167845888|ref|ZP_02471396.1| amino acid ABC transporter, permease protein [Burkholderia pseudomallei B7210] gi|167894458|ref|ZP_02481860.1| amino acid ABC transporter, permease protein [Burkholderia pseudomallei 7894] gi|167902859|ref|ZP_02490064.1| amino acid ABC transporter, permease protein [Burkholderia pseudomallei NCTC 13177] gi|167911102|ref|ZP_02498193.1| amino acid ABC transporter, permease protein [Burkholderia pseudomallei 112] gi|167919122|ref|ZP_02506213.1| amino acid ABC transporter, permease protein [Burkholderia pseudomallei BCC215] gi|226196344|ref|ZP_03791926.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Burkholderia pseudomallei Pakistan 9] gi|237812102|ref|YP_002896553.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Burkholderia pseudomallei MSHR346] gi|242316328|ref|ZP_04815344.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Burkholderia pseudomallei 1106b] gi|254179932|ref|ZP_04886531.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Burkholderia pseudomallei 1655] gi|254188663|ref|ZP_04895174.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Burkholderia pseudomallei Pasteur 52237] gi|254197266|ref|ZP_04903688.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Burkholderia pseudomallei S13] gi|254260445|ref|ZP_04951499.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Burkholderia pseudomallei 1710a] gi|52209895|emb|CAH35867.1| putative ABC transport system, membrane protein [Burkholderia pseudomallei K96243] gi|52426888|gb|AAU47481.1| amino acid ABC transporter, permease protein [Burkholderia mallei ATCC 23344] gi|121227692|gb|ABM50210.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Burkholderia mallei SAVP1] gi|126220922|gb|ABN84428.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Burkholderia pseudomallei 668] gi|126226540|gb|ABN90080.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Burkholderia pseudomallei 1106a] gi|126242418|gb|ABO05511.1| cystine ABC transporter, permease protein [Burkholderia mallei NCTC 10247] gi|157936342|gb|EDO92012.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Burkholderia pseudomallei Pasteur 52237] gi|169654007|gb|EDS86700.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Burkholderia pseudomallei S13] gi|184210472|gb|EDU07515.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Burkholderia pseudomallei 1655] gi|225931561|gb|EEH27566.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Burkholderia pseudomallei Pakistan 9] gi|237504828|gb|ACQ97146.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Burkholderia pseudomallei MSHR346] gi|242139567|gb|EES25969.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Burkholderia pseudomallei 1106b] gi|254219134|gb|EET08518.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Burkholderia pseudomallei 1710a] Length = 219 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 38/127 (29%), Positives = 69/127 (54%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IALS AA+++E +R + + +GQ AA +LGL+ R+ R V+ PQA+R +P L++ Sbjct: 92 IALSANVAAYMSESMRGAINGIDKGQWLAAYSLGLSWRQTLRYVIGPQALRIAVPSLSNS 151 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++L+K++SL + +L+ II T Q + + L +Y L ++ Sbjct: 152 LISLIKDTSLVSVITVTELLRSAQEIIASTYQPLPLYLAAAAVYWVLCQILEWVQRWYER 211 Query: 391 KIALKEK 397 ++AL + Sbjct: 212 RLALPSR 218 >gi|319942068|ref|ZP_08016387.1| hypothetical protein HMPREF9464_01606 [Sutterella wadsworthensis 3_1_45B] gi|319804452|gb|EFW01330.1| hypothetical protein HMPREF9464_01606 [Sutterella wadsworthensis 3_1_45B] Length = 292 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 56/213 (26%), Positives = 102/213 (47%), Gaps = 22/213 (10%) Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240 LT+ +A V S +LGI+ + A +LSR + +L +++I G P ++ I L Sbjct: 95 LTIGVSAAAMVLSLLLGILSA--AAKLSRVLLLRDLSSLYVVFIR-----GTPLIMQIYL 147 Query: 241 KYQLHFDKPVLGQFNFIGGST--VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQME 298 F ++ G+ V F + I LS + A+I+EI+R +++ Q+E Sbjct: 148 -------------FFYLVGTAWGVDDRFWAGVIILSVFEGAYISEIIRGSYLSIDPAQIE 194 Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN 358 +A A+G T + R V++PQ +P L Q+ +++K+SSL + +L + Sbjct: 195 SAKAVGFTRLQQLRFVIVPQMAARTLPALAGQFASVIKDSSLLSMISVVELTQAMREVSA 254 Query: 359 QTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 + +E L +YL L++ +AL L + Sbjct: 255 VNLKLVECYLFLGVLYLILTLPVALVSRLLEKR 287 >gi|134291671|ref|YP_001115440.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia vietnamiensis G4] gi|134134860|gb|ABO59185.1| amino acid ABC transporter membrane protein 1, PAAT family [Burkholderia vietnamiensis G4] Length = 228 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 35/101 (34%), Positives = 59/101 (58%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 E+ + +A++ A+ EIVR+G+ AVP G +EAA AL ++ + R V+LPQA+ + Sbjct: 92 EYAAAILAMTLNLGAYSVEIVRAGVAAVPNGHVEAASALAMSRAQMLRHVVLPQALAKVF 151 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365 P L+SQ + + S++ + ADL G I ++ +A E Sbjct: 152 PALSSQIVITMLGSAVVSQISVADLTYAAGYIQSRNFRAFE 192 >gi|313106242|ref|ZP_07792491.1| putative amino acid ABC transporter permease [Pseudomonas aeruginosa 39016] gi|310878993|gb|EFQ37587.1| putative amino acid ABC transporter permease [Pseudomonas aeruginosa 39016] Length = 214 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 36/128 (28%), Positives = 72/128 (56%), Gaps = 4/128 (3%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + L Y AA+ E+VR G+ +VP AA +LGL++R+ ++LP A R P + Sbjct: 91 LVLGVYAAAYCTEVVRGGVFSVPPSVRRAARSLGLSYRQDLFHIVLPMAARVAFPGWVNL 150 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 L+++K++SL + +G +L+ TI+ + + + ++ I +Y +S ++A RL A Sbjct: 151 TLSVMKDTSLVLWIGIVELLRASQTIVTRIQEPLFVLCIAGLVYYLMSWVVA----RLGA 206 Query: 391 KIALKEKK 398 ++ + ++ Sbjct: 207 RLERRWQQ 214 >gi|262044438|ref|ZP_06017499.1| amino acid ABC superfamily ATP binding cassette transporter [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|330010549|ref|ZP_08306782.1| ABC transporter, permease protein [Klebsiella sp. MS 92-3] gi|259038218|gb|EEW39428.1| amino acid ABC superfamily ATP binding cassette transporter [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|328534486|gb|EGF61074.1| ABC transporter, permease protein [Klebsiella sp. MS 92-3] Length = 225 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 33/96 (34%), Positives = 56/96 (58%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +AL+ YT+AF+ +I + A+P+GQ EA+ LGL+ + V+ PQA+R I P Sbjct: 98 VALTLYTSAFLLDIWFGSIRALPKGQWEASRCLGLSFGQTLYRVVAPQALRIAIAPTVGF 157 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 + ++K ++LA +GF +L G + N T Q ++ Sbjct: 158 AVQVIKGTALASIIGFVELTKAGTMLTNVTYQPFKV 193 >gi|239982049|ref|ZP_04704573.1| amino acid ABC transporter transmembrane protein [Streptomyces albus J1074] gi|291453901|ref|ZP_06593291.1| amino acid ABC transporter integral membrane protein [Streptomyces albus J1074] gi|291356850|gb|EFE83752.1| amino acid ABC transporter integral membrane protein [Streptomyces albus J1074] Length = 216 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 29/81 (35%), Positives = 52/81 (64%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IA+ + + + A++ R+G+ AVP GQ EAA AL L R+ V+LPQA+R ++P L + Sbjct: 93 IAIGLHYSTYTAQVYRAGIDAVPVGQWEAATALSLPARRTWTAVILPQAIRRVVPALGNY 152 Query: 331 YLNLLKNSSLAVAVGFADLVS 351 +++LK++ L +G +++ Sbjct: 153 VVSMLKDTPLLAGIGVLEMLQ 173 >gi|238563299|ref|ZP_00439085.2| cystine ABC transporter, permease protein [Burkholderia mallei GB8 horse 4] gi|251768162|ref|ZP_02269699.2| cystine ABC transporter, permease protein [Burkholderia mallei PRL-20] gi|254199868|ref|ZP_04906234.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Burkholderia mallei FMH] gi|147749464|gb|EDK56538.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Burkholderia mallei FMH] gi|238520964|gb|EEP84419.1| cystine ABC transporter, permease protein [Burkholderia mallei GB8 horse 4] gi|243060612|gb|EES42798.1| cystine ABC transporter, permease protein [Burkholderia mallei PRL-20] Length = 240 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 38/127 (29%), Positives = 69/127 (54%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IALS AA+++E +R + + +GQ AA +LGL+ R+ R V+ PQA+R +P L++ Sbjct: 113 IALSANVAAYMSESMRGAINGIDKGQWLAAYSLGLSWRQTLRYVIGPQALRIAVPSLSNS 172 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++L+K++SL + +L+ II T Q + + L +Y L ++ Sbjct: 173 LISLIKDTSLVSVITVTELLRSAQEIIASTYQPLPLYLAAAAVYWVLCQILEWVQRWYER 232 Query: 391 KIALKEK 397 ++AL + Sbjct: 233 RLALPSR 239 >gi|190895058|ref|YP_001985351.1| putative amino acid ABC transporter permease [Rhizobium etli CIAT 652] gi|190700719|gb|ACE94801.1| probable amino acid ABC transporter, permease protein [Rhizobium etli CIAT 652] gi|327194399|gb|EGE61259.1| putative amino acid ABC transporter permease [Rhizobium etli CNPAF512] Length = 213 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 51/153 (33%), Positives = 79/153 (51%), Gaps = 11/153 (7%) Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290 G+P LV + L Y L P +G N P ++ I LS TAA+ AE +R G Sbjct: 58 GVPLLVQLLLIYNLL---PAIG-INV-------PSIVAAIIGLSLCTAAYQAENLRGGFA 106 Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 +VP G +E+A +GLT R+ R + +P A+R P L ++ + +LK SSL VG +L Sbjct: 107 SVPLGLLESAEMVGLTPRQVFRRIKVPIALRLTFPALVNEAILILKASSLVSVVGIVELT 166 Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 + + T ++I IYL ++ ++AL Sbjct: 167 RMAQDLAGSTFLPLQIFASAGLIYLMINWLVAL 199 >gi|325121844|gb|ADY81367.1| putative glutamine transport system permease protein [Acinetobacter calcoaceticus PHEA-2] Length = 221 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 49/181 (27%), Positives = 96/181 (53%), Gaps = 21/181 (11%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 KAL LY+ I +P LVL+ + Y F F + + +F ++++ + + Sbjct: 52 KALCRLYLEAIRI--IPILVLLFVFY-----------FGF--ATWFNWQFSAMWVCVVVF 96 Query: 277 T---AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333 A + ++VR+ + ++ + Q ++A ALGLTH +A V+ PQ+++ + P + + Sbjct: 97 VLWGTAEMGDLVRAAITSIDQHQRDSAYALGLTHVQALIYVIFPQSLKRVTPGAINLFTR 156 Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM--FIYLSLSIMIALFMNRLNAK 391 ++K SSLAV +G +++ VG II + + +W+ FI++ L +I ++RL A Sbjct: 157 MVKTSSLAVLIGVVEVIKVGQQIIENSLLTVPSASLWIYGFIFI-LYFLICYPLSRLAAH 215 Query: 392 I 392 + Sbjct: 216 L 216 Score = 38.5 bits (88), Expect = 1.7, Method: Compositional matrix adjust. Identities = 24/71 (33%), Positives = 38/71 (53%) Query: 79 YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138 Y +S+ ++ G T +AF + + I GT+ G S N +V +CR+Y+E R Sbjct: 5 YLFQASHLERLMWGLWATAKIAFISVFFSAIFGTVFGVIMTSKNIVVKALCRLYLEAIRI 64 Query: 139 IPPLVVIFFLY 149 IP LV++F Y Sbjct: 65 IPILVLLFVFY 75 >gi|304395379|ref|ZP_07377262.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea sp. aB] gi|304356673|gb|EFM21037.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea sp. aB] Length = 219 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 37/108 (34%), Positives = 62/108 (57%), Gaps = 1/108 (0%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G V+P + + +AL+ YT+AF+ +I + A+P+GQ EA+ LGLT + V+ PQ Sbjct: 81 GIDVAP-WTAASLALTFYTSAFLVDIWYGSIRALPKGQWEASRCLGLTFGQTLWRVVAPQ 139 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 A+R I P + ++K ++LA +GF +L G + N T Q ++ Sbjct: 140 AIRIGIAPTVGFAVQVIKGTALASIIGFIELTKAGTILNNVTYQPFKV 187 >gi|227890102|ref|ZP_04007907.1| ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus johnsonii ATCC 33200] gi|227849546|gb|EEJ59632.1| ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus johnsonii ATCC 33200] Length = 225 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 59/213 (27%), Positives = 108/213 (50%), Gaps = 20/213 (9%) Query: 185 TNAKIFVFSFVLGIVL-SLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243 T+ I V S ++G+ L +LF + R + K + +Y+ F + +PT+VL+ L Y Sbjct: 24 TSVWIAVLSLIIGLALGALFG--VLRTSKSRLVKVIFRIYLEFFRM--VPTVVLLFLFYY 79 Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303 + + QFN ++V IA + + +A ++IVR LI+VP+ Q E+ +AL Sbjct: 80 I-----LPRQFNLNWPASVMA-----VIAFALWVSAEFSDIVRGTLISVPKIQRESGLAL 129 Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363 GL + VLLPQA + +P + ++K +SL + + D+++VG I+ Q Sbjct: 130 GLNKWQLFIYVLLPQAFQLELPATINLATRVIKTTSLLMMISVMDVINVGQQIVEANNQT 189 Query: 364 IEIILIWM-----FIYLSLSIMIALFMNRLNAK 391 + W+ F+Y + ++L+ RL+ + Sbjct: 190 NPNGVFWVYGLIFFLYFIVDYPLSLWAKRLSKR 222 Score = 43.5 bits (101), Expect = 0.060, Method: Compositional matrix adjust. Identities = 23/63 (36%), Positives = 36/63 (57%) Query: 87 TAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIF 146 T +L G + W+A +I +G L G R S ++LV I R+Y+E FR +P +V++F Sbjct: 16 TRLLGGLWTSVWIAVLSLIIGLALGALFGVLRTSKSRLVKVIFRIYLEFFRMVPTVVLLF 75 Query: 147 FLY 149 Y Sbjct: 76 LFY 78 >gi|152998088|ref|YP_001342923.1| polar amino acid ABC transporter inner membrane subunit [Marinomonas sp. MWYL1] gi|150839012|gb|ABR72988.1| polar amino acid ABC transporter, inner membrane subunit [Marinomonas sp. MWYL1] Length = 372 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 34/108 (31%), Positives = 63/108 (58%), Gaps = 8/108 (7%) Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 +A + AEI+R + AVP+GQ+EA+ A+G + K V++PQA+R+ +P L + ++ L K Sbjct: 249 SAVYKAEIIRGAIQAVPKGQIEASYAMGCGYWKTMAYVVMPQALRNSVPALITNFIGLFK 308 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 ++L + +G +++ IN T E W+ ++ I+I+ F Sbjct: 309 ETTLVMILGLLEVMGA----INATFHNAE----WLGLHAEGPIVISAF 348 >gi|76808570|ref|YP_333373.1| amino acid ABC transporter permease [Burkholderia pseudomallei 1710b] gi|124383656|ref|YP_001026395.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Burkholderia mallei NCTC 10229] gi|134282373|ref|ZP_01769078.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Burkholderia pseudomallei 305] gi|254178565|ref|ZP_04885220.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Burkholderia mallei ATCC 10399] gi|254206196|ref|ZP_04912548.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Burkholderia mallei JHU] gi|254297764|ref|ZP_04965217.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Burkholderia pseudomallei 406e] gi|254358594|ref|ZP_04974867.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Burkholderia mallei 2002721280] gi|76578023|gb|ABA47498.1| amino acid ABC transporter, permease protein [Burkholderia pseudomallei 1710b] gi|124291676|gb|ABN00945.1| cystine ABC transporter, permease protein [Burkholderia mallei NCTC 10229] gi|134246411|gb|EBA46500.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Burkholderia pseudomallei 305] gi|147753639|gb|EDK60704.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Burkholderia mallei JHU] gi|148027721|gb|EDK85742.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Burkholderia mallei 2002721280] gi|157807961|gb|EDO85131.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Burkholderia pseudomallei 406e] gi|160699604|gb|EDP89574.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein [Burkholderia mallei ATCC 10399] Length = 230 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 38/127 (29%), Positives = 69/127 (54%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IALS AA+++E +R + + +GQ AA +LGL+ R+ R V+ PQA+R +P L++ Sbjct: 103 IALSANVAAYMSESMRGAINGIDKGQWLAAYSLGLSWRQTLRYVIGPQALRIAVPSLSNS 162 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++L+K++SL + +L+ II T Q + + L +Y L ++ Sbjct: 163 LISLIKDTSLVSVITVTELLRSAQEIIASTYQPLPLYLAAAAVYWVLCQILEWVQRWYER 222 Query: 391 KIALKEK 397 ++AL + Sbjct: 223 RLALPSR 229 >gi|288871380|ref|ZP_06117360.2| amino acid ABC transporter, amino acid-binding protein/permease protein [Clostridium hathewayi DSM 13479] gi|288863721|gb|EFC96019.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Clostridium hathewayi DSM 13479] Length = 283 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 36/117 (30%), Positives = 65/117 (55%), Gaps = 1/117 (0%) Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321 +SP F + +I +S T A++AE VR G++++ GQ E A A+G+TH + V++PQA+R Sbjct: 122 MSPMFAAYFI-VSINTGAYMAETVRGGILSIDPGQTEGAKAIGMTHFQTMVNVIMPQALR 180 Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378 +I+P + + + +K++ + +G +L + E I M IY L+ Sbjct: 181 NIMPQIGNNLIINIKDTCVLSVIGVVELFYATKGVAGAYYTYFEAFTITMVIYFILT 237 >gi|239833864|ref|ZP_04682192.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium LMG 3301] gi|239821927|gb|EEQ93496.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium LMG 3301] Length = 369 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 52/167 (31%), Positives = 89/167 (53%), Gaps = 13/167 (7%) Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF---LIFGLPTLVLIALK 241 TN IF S +L +V +L ++R K GK P+ ++T L GLP ++ I Sbjct: 162 TNIVIFFVSAILILVWALVIA-IARTLPGKAGK--PIRVLATLYSDLFRGLPAIITI--- 215 Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301 Y + F P+ G S+ + ++L + YT+ E+ R+G+ +V Q+ AA Sbjct: 216 YLIGFGLPLTGLPILKDLSSNAYAIIALTLTYGAYTS----EVYRAGIESVHPSQIAAAR 271 Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348 +LGL++ + R V++P A+R IIPPL + ++L K+++L +G D Sbjct: 272 SLGLSYARTMRYVVVPLAVRGIIPPLMNNCISLQKDTALVAIIGTID 318 >gi|167574646|ref|ZP_02367520.1| amino acid ABC transporter, permease/ATP-binding protein [Burkholderia oklahomensis C6786] Length = 342 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 45/139 (32%), Positives = 79/139 (56%), Gaps = 6/139 (4%) Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH-RKATRLVLLPQAM 320 +SP F + + L+ AAF AE +R G+++V GQ+EAA ALGL R+ATR+V LPQAM Sbjct: 164 ISP-FCAAVLGLTLNHAAFAAEGIRGGILSVDPGQLEAAAALGLPRARQATRIV-LPQAM 221 Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL---IWMFIYLSL 377 R+ +P + ++L K +S+ + +L I + + I +++ +W I L++ Sbjct: 222 RAFLPVAFNDLISLAKGTSMVYVLAMPELFYTVQVIYRRNLEVIPLLMVATVWYLIILTV 281 Query: 378 SIMIALFMNRLNAKIALKE 396 ++ + R A+ A++ Sbjct: 282 LSIVQAQVERRYARGAVRN 300 >gi|83718672|ref|YP_443032.1| amino acid ABC transporter permease [Burkholderia thailandensis E264] gi|83652497|gb|ABC36560.1| amino acid ABC transporter, permease protein [Burkholderia thailandensis E264] Length = 274 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 57/208 (27%), Positives = 101/208 (48%), Gaps = 18/208 (8%) Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249 +F V +VL+L SR L Y+S ++ G P LV I + +++ P Sbjct: 84 MLFGLVGAVVLALMGIGGSRVL-----AGLARAYVS--VMRGTPLLVQI---FVIYYGLP 133 Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309 LG ++ P + IALS AA+++E +R + + +GQ AA +LGL+ R+ Sbjct: 134 SLG-------VSLDPTPAGV-IALSANVAAYMSESMRGAINGIEKGQWLAAYSLGLSWRQ 185 Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369 R V+ PQA+R +P L++ ++L+K++SL + +L+ II T Q + + L Sbjct: 186 TLRYVIGPQALRIAVPSLSNSLISLIKDTSLVSVITVTELLRSAQEIIASTYQPLPLYLA 245 Query: 370 WMFIYLSLSIMIALFMNRLNAKIALKEK 397 +Y L ++ ++AL + Sbjct: 246 AAGVYWVLCQILEWVQRWYERRLALPSR 273 >gi|327188019|gb|EGE55249.1| putative amino acid ABC transporter, permease protein [Rhizobium etli CNPAF512] Length = 260 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 39/119 (32%), Positives = 64/119 (53%), Gaps = 7/119 (5%) Query: 233 PTLVLI-ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291 P LVLI A Y F+ V G + P+++ I L+ +A++AEI R +++ Sbjct: 100 PHLVLIFATTYIFPFEIVVFGNY------LPFPDWLKAVIGLAIPASAYVAEITRGAILS 153 Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 +P Q EAA LG + +A R ++LPQ +R +PP + ++ +SLA VG +L+ Sbjct: 154 IPTTQWEAAKGLGFSRSQALRWIILPQCLRRSLPPWMNILASITMGTSLASLVGVHELL 212 Score = 36.6 bits (83), Expect = 6.3, Method: Compositional matrix adjust. Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 7/76 (9%) Query: 92 GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIF----- 146 GF+ ++ S M T++GT+ G +L + V + YV+ FRN P LV+IF Sbjct: 52 GFLMNVVISLSAMTLGTVVGTIFGILQLVPYRPVRYPVVAYVQAFRNAPHLVLIFATTYI 111 Query: 147 FLYKSVL--SVLPIPD 160 F ++ V+ + LP PD Sbjct: 112 FPFEIVVFGNYLPFPD 127 >gi|254449783|ref|ZP_05063220.1| ABC transporter, membrane spanning protein [Octadecabacter antarcticus 238] gi|198264189|gb|EDY88459.1| ABC transporter, membrane spanning protein [Octadecabacter antarcticus 238] Length = 201 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 46/134 (34%), Positives = 77/134 (57%), Gaps = 5/134 (3%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G +SP ++ IAL+ A+ EI+R G+ ++PRGQ+EA ALGL+ + R ++L Sbjct: 63 GVRLSPTVTAI-IALAINGGAYAIEIIRGGVESIPRGQVEAGAALGLSRAQIFRDIVLVP 121 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378 A+R+I P LTSQ++ L SS+ ++ ++L I + T ++ E+ +YL +S Sbjct: 122 ALRAIYPALTSQFILLTLTSSVCSSISASELTHFAQRIESATFRSFEVYFTITGLYLLIS 181 Query: 379 ----IMIALFMNRL 388 M+A+F RL Sbjct: 182 WMMMTMLAVFGRRL 195 >gi|304395378|ref|ZP_07377261.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea sp. aB] gi|304356672|gb|EFM21036.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea sp. aB] Length = 222 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 37/102 (36%), Positives = 58/102 (56%) Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 A+ EI+R+G+ P+GQ EA LGLT + V+LP A++ I P L SQ + ++ Sbjct: 102 GAYSTEIIRAGIQVTPKGQWEAGRVLGLTRSQTFLRVVLPPALQRIYPALVSQCIIVMLG 161 Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379 SS+ V + +L I ++T + E+ L+ IYL+LSI Sbjct: 162 SSVVSQVSYEELTFAANLIQSRTFLSFEVYLVTTLIYLALSI 203 >gi|296158679|ref|ZP_06841509.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. Ch1-1] gi|295891247|gb|EFG71035.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. Ch1-1] Length = 248 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 36/101 (35%), Positives = 61/101 (60%), Gaps = 1/101 (0%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 GS VS F +++ AF++E++R+GL +VPR Q+EAA + L + LVLLPQ Sbjct: 91 GSEVS-LFTIATVSICIVATAFLSEVIRAGLESVPRQQIEAAEVMNLGFTRTLFLVLLPQ 149 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359 + + I+PP + + +K++SLA +G +L G ++N+ Sbjct: 150 SWKVILPPAFAFMVMFIKDTSLASQMGVVELTFTGKVLMNR 190 >gi|190894714|ref|YP_001985007.1| putative amino acid ABC transporter permease [Rhizobium etli CIAT 652] gi|190700375|gb|ACE94457.1| probable amino acid ABC transporter, permease protein [Rhizobium etli CIAT 652] Length = 219 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 59/213 (27%), Positives = 101/213 (47%), Gaps = 22/213 (10%) Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240 LT+ +A V +F+ G+ RLSR F + AL YI F T + + L Sbjct: 21 LTVMGSALALVMAFLAGL------GRLSRFFAVR---ALATAYIEFFR----GTSIFVQL 67 Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300 + ++F P G T++P + +AL A+ AE+VR + AV R Q EA Sbjct: 68 -FWVYFVLP-------FAGVTLTP-LQAGVLALGLNVGAYGAEVVRGAVKAVGREQSEAC 118 Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 +AL L+ + R V+LPQA+ ++P + + LLK +++ + D+ + QT Sbjct: 119 VALNLSRYQRMRHVILPQALPLMLPTFCNNAIELLKGTAVVSLISLTDMTFQAQVVRAQT 178 Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393 G + + +Y +++ I+ M RL ++A Sbjct: 179 GNTLVPFATILILYFLMALAISAAMRRLERRMA 211 >gi|88808787|ref|ZP_01124297.1| ABC transporter for amino acids, membrane component [Synechococcus sp. WH 7805] gi|88787775|gb|EAR18932.1| ABC transporter for amino acids, membrane component [Synechococcus sp. WH 7805] Length = 335 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 38/98 (38%), Positives = 59/98 (60%), Gaps = 8/98 (8%) Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342 E +R GL AV Q+EAA ALGL + RLV+LPQA+R +P LT+Q + LL+N+SL Sbjct: 213 EDLRGGLQAVSPTQIEAAAALGLGPWQIQRLVILPQALRIAVPALTNQAVGLLQNTSLMA 272 Query: 343 AVGFADLVSVGGTIINQT---GQAIEI-----ILIWMF 372 +G +L+ + +++ G+ +E+ L W+F Sbjct: 273 ILGLVELLGISQSLLANPAYIGRHLEVYVWLAALYWLF 310 >gi|319783614|ref|YP_004143090.1| polar amino acid ABC transporter inner membrane subunit [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317169502|gb|ADV13040.1| polar amino acid ABC transporter, inner membrane subunit [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 239 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 48/193 (24%), Positives = 90/193 (46%), Gaps = 12/193 (6%) Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265 RL+ + + + LP L FG+P L+ ++Y F V N Sbjct: 58 RLAANIYTTVFRGLPELVTLFLFFFGMPILLQHLVRY---FRPDVTIDVN---------S 105 Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F++ I L+ +++ +E+ S A+P+GQ E A+GL++ R V++PQ +R P Sbjct: 106 FVAGMIVLALIFSSYASEVFLSAFRAIPKGQYEGGYAIGLSNWLTMRKVIVPQLLRIAFP 165 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 L + +L+LLK++SL VG A+ + T A + ++L L+++ + Sbjct: 166 GLENCWLSLLKDTSLVSVVGLAETLRNASIAARVTKHAFLFFGVASLVFLGLAVLSSFAT 225 Query: 386 NRLNAKIALKEKK 398 N + + +E + Sbjct: 226 NAILRSLGRREAQ 238 >gi|307727080|ref|YP_003910293.1| ectoine/hydroxyectoine ABC transporter permease EhuD [Burkholderia sp. CCGE1003] gi|307587605|gb|ADN61002.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD [Burkholderia sp. CCGE1003] Length = 219 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 45/148 (30%), Positives = 78/148 (52%), Gaps = 8/148 (5%) Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301 Y L + PV G I S ++ + + + +CYT+ E+ R+GL V RGQ EAA Sbjct: 74 YVLFYVLPVYG----ITMSALTAGTVGIALHYACYTS----EVYRAGLNGVARGQWEAAC 125 Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361 AL L+ + V+LPQA+R +IP L + + + K++ + A+ +L+ I ++T Sbjct: 126 ALSLSPWRTYSGVILPQAIRPVIPALGNYLVAMFKDTPVLSAITVVELMQQAKNIGSETF 185 Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLN 389 + +E I + +L +S+ A + RL Sbjct: 186 RYLEPITLAGIFFLLISVSFAQLVRRLE 213 >gi|300172349|ref|YP_003771514.1| L-cystine permease [Leuconostoc gasicomitatum LMG 18811] gi|299886727|emb|CBL90695.1| L-cystine permease protein [Leuconostoc gasicomitatum LMG 18811] Length = 248 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 36/113 (31%), Positives = 63/113 (55%) Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328 L+I AAF++EI+R+ L +VP Q EAA+ G T R+ ++ PQA+ +P Sbjct: 100 LFITYGLNMAAFLSEIIRAALESVPATQREAALTSGYTKRQMYFKIIFPQAVIIAMPSFA 159 Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 + ++LL+++SLA +G D+V + T +E + M I++ LS ++ Sbjct: 160 TMVISLLQDTSLAFTIGVIDVVGKAKALGTATFHTVEAYISAMIIFVILSFIL 212 >gi|257483718|ref|ZP_05637759.1| amino acid ABC transporter permease [Pseudomonas syringae pv. tabaci ATCC 11528] gi|289627332|ref|ZP_06460286.1| amino acid ABC transporter permease [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289650581|ref|ZP_06481924.1| amino acid ABC transporter permease [Pseudomonas syringae pv. aesculi str. 2250] gi|330870382|gb|EGH05091.1| amino acid ABC transporter permease [Pseudomonas syringae pv. aesculi str. 0893_23] gi|330987163|gb|EGH85266.1| amino acid ABC transporter permease [Pseudomonas syringae pv. lachrymans str. M301315] gi|331012129|gb|EGH92185.1| amino acid ABC transporter permease [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 231 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 49/180 (27%), Positives = 87/180 (48%), Gaps = 23/180 (12%) Query: 214 KTGKALPLLYI-STF--LIFGLPTLVLIALKY----------QLHFDKPVLGQFNFIGGS 260 KT PL ++ ST+ L+ G+P L+ + L Y FD P L F G Sbjct: 41 KTSPYKPLQWLGSTYSTLVRGIPELLWVLLIYFGTVNGMRALGKLFDIPDLALSAFSAG- 99 Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320 IAL A+ E+ R ++A+P+G EA +ALG++ + ++LPQ Sbjct: 100 ---------VIALGICFGAYATEVFRGAILAIPKGHREAGLALGMSRSRILFKLVLPQMW 150 Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380 R +P L + ++ L+K+++L +G +++ + T QA ++ F+YL L+++ Sbjct: 151 RIALPGLGNLFMILMKDTALVSVIGLEEIMRHAQIAVGFTKQAFTFYMVAAFMYLGLTVL 210 >gi|282849423|ref|ZP_06258808.1| ABC transporter, permease protein [Veillonella parvula ATCC 17745] gi|282581127|gb|EFB86525.1| ABC transporter, permease protein [Veillonella parvula ATCC 17745] Length = 238 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 33/87 (37%), Positives = 54/87 (62%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P + +Y + + AA+ AEI+RS + AV G+ EAA +LG+T ++ ++LPQA Sbjct: 95 PGLVFVYAVFTLHIAAYSAEIMRSSIDAVSPGEKEAAKSLGMTEFQSYVRIILPQAFTMS 154 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLV 350 IPPLT+ + +LK ++L VG D++ Sbjct: 155 IPPLTNLVIGMLKGTALIFNVGVVDMM 181 >gi|326793482|ref|YP_004311302.1| polar amino acid ABC transporter inner membrane subunit [Marinomonas mediterranea MMB-1] gi|326544246|gb|ADZ89466.1| polar amino acid ABC transporter, inner membrane subunit [Marinomonas mediterranea MMB-1] Length = 220 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 41/122 (33%), Positives = 71/122 (58%), Gaps = 3/122 (2%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA-TRLVLLPQAMRSIIPPLTS 329 IAL+ A+ EI+R+GL ++P+GQ+EAA LG+T R+ TR++ +P A I P LTS Sbjct: 92 IALTINLGAYSTEIIRAGLGSIPKGQVEAAKVLGMTFRQTLTRVIFVP-AFEKIYPALTS 150 Query: 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 Q + ++ S++ + +L + ++ +A E L+ +YL L+ MI ++ +L Sbjct: 151 QCIIVMLGSAVISQISVEELTYAANLVQSRNFRAFESYLVTALLYLGLA-MIMRYVFKLI 209 Query: 390 AK 391 K Sbjct: 210 GK 211 >gi|293607250|ref|ZP_06689591.1| L-cystine ABC superfamily ATP binding cassette transporter, membrane protein [Achromobacter piechaudii ATCC 43553] gi|292814342|gb|EFF73482.1| L-cystine ABC superfamily ATP binding cassette transporter, membrane protein [Achromobacter piechaudii ATCC 43553] Length = 249 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 55/199 (27%), Positives = 96/199 (48%), Gaps = 14/199 (7%) Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252 SF LG+ L+ F L R F AL Y+ +LI G P LV + + + + P +G Sbjct: 53 SFALGLALA-FVVALIRLFGPAPLVALVRFYV--WLIRGTPLLVQL---FVIFYGLPSVG 106 Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312 V + I + A+ +E++R + ++ +GQ EAA +L +T +A R Sbjct: 107 --------IVLDPLPAALIGFTLNVGAYNSEVIRGAIESITKGQWEAAYSLSMTRGQALR 158 Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372 +LPQA R +PPL++ ++ L+K++SLA + ++ I T + + + Sbjct: 159 RTILPQAARVAVPPLSNSFIALVKDTSLAAVLTVPEIFQAAQRIAAVTYEPLILYTEAAL 218 Query: 373 IYLSLSIMIALFMNRLNAK 391 IYL S +++ RL + Sbjct: 219 IYLVFSSVLSAAQVRLERR 237 >gi|171318276|ref|ZP_02907437.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria MEX-5] gi|171096540|gb|EDT41436.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria MEX-5] Length = 240 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 52/197 (26%), Positives = 97/197 (49%), Gaps = 12/197 (6%) Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL----GQFNFIGGST 261 +LSRH ++ + L LY + F G+P L++I Y +F L GQ+ G Sbjct: 47 KLSRH---RSARLLGDLYTTVFR--GVPELLVI---YLFYFGGSTLVTTIGQWFGAEGFI 98 Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321 P F+ +A+ + A+ AE+ R+ ++AV +G++EAA ++G+ R +L+PQ +R Sbjct: 99 GVPPFVIGALAVGMISGAYQAEVYRAAVLAVSKGELEAARSIGMPRGMVLRRILVPQVLR 158 Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 +P + + + LK+S+L G A+L+ + T Q + +YL ++ + Sbjct: 159 FALPGIGNVWQLSLKDSALISVTGLAELLRTSQIAASSTHQYFVFFVAGGTLYLVMTGLS 218 Query: 382 ALFMNRLNAKIALKEKK 398 NR A + ++ Sbjct: 219 NRVFNRAEAIVGRSFRR 235 >gi|167585065|ref|ZP_02377453.1| ABC polar amino acid transporter, inner membrane subunit [Burkholderia ubonensis Bu] Length = 226 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 35/119 (29%), Positives = 65/119 (54%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I S A+ AE++R + ++P+GQ EAA ++ +T +A R +LPQA R +P L++ Sbjct: 94 IGFSLNVGAYNAEVIRGVIESIPKGQWEAAYSMAMTRAQALRRAILPQAARVALPALSNS 153 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 +++L+K++SLA + ++ I T + + + IYL S +++ RL Sbjct: 154 FISLVKDTSLAAVLTVPEVFQAAQRIAAVTYEPLILYTEAALIYLLFSSVLSTLQQRLE 212 >gi|327192313|gb|EGE59278.1| putative amino acid ABC transporter, permease protein [Rhizobium etli CNPAF512] Length = 236 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 59/213 (27%), Positives = 101/213 (47%), Gaps = 22/213 (10%) Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240 LT+ +A V +F+ G+ RLSR F + AL YI F T + + L Sbjct: 38 LTVMGSALALVMAFLAGL------GRLSRFFAVR---ALATAYIEFFR----GTSIFVQL 84 Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300 + ++F P G T++P + +AL A+ AE+VR + AV R Q EA Sbjct: 85 -FWVYFVLP-------FAGVTLTP-LQAGVLALGLNVGAYGAEVVRGAVKAVGREQSEAC 135 Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 +AL L+ + R V+LPQA+ ++P + + LLK +++ + D+ + QT Sbjct: 136 VALNLSRYQRMRHVILPQALPLMLPTFCNNAIELLKGTAVVSLISLTDMTFQAQVVRAQT 195 Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393 G + + +Y +++ I+ M RL ++A Sbjct: 196 GNTLVPFATILILYFLMALAISAAMRRLERRMA 228 >gi|326803172|ref|YP_004320990.1| ABC transporter, permease protein [Aerococcus urinae ACS-120-V-Col10a] gi|326650650|gb|AEA00833.1| ABC transporter, permease protein [Aerococcus urinae ACS-120-V-Col10a] Length = 229 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 33/87 (37%), Positives = 52/87 (59%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IAL Y AF+AEI+R +AV + Q EAA++LG+ + ++ PQ + +P LT+ Sbjct: 98 IALVAYNGAFMAEIIRPAYLAVGQDQKEAALSLGMIAWQRNWRIIFPQIIPIALPSLTTA 157 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTII 357 ++LLK++SL +G DL+ II Sbjct: 158 VIDLLKDTSLLFLIGLVDLMGQAEIII 184 >gi|295115402|emb|CBL36249.1| amino acid ABC transporter membrane protein, PAAT family (TC 3.A.1.3.-) [butyrate-producing bacterium SM4/1] Length = 234 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 37/126 (29%), Positives = 75/126 (59%), Gaps = 8/126 (6%) Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 A+ +EI R+ ++++P+GQ EAA++LG+++ + V+LPQA++ +PPL + ++ L+K+ Sbjct: 102 GAYSSEIFRAAILSIPKGQWEAAMSLGMSYPQQLIRVILPQAVKISVPPLFNSFIALVKD 161 Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM---FIYLSLSIMIALFMNRLNAKIAL 394 +SLA + ++ I T + E +L+++ FIYL ++ ++ ++ L Sbjct: 162 TSLAANITIPEMFLTTQRI---TARNYEPLLMYIEVGFIYLIFCTVLNYLQKKVEDRLML 218 Query: 395 --KEKK 398 EKK Sbjct: 219 TPHEKK 224 >gi|260460035|ref|ZP_05808288.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD [Mesorhizobium opportunistum WSM2075] gi|259034246|gb|EEW35504.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD [Mesorhizobium opportunistum WSM2075] Length = 219 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 36/134 (26%), Positives = 71/134 (52%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P ++ I L + + AE+ R+G+ VPRGQ EAA A L+ R+ +++PQA+ + Sbjct: 86 PPLVAGVIGLGLHYGTYTAEVYRAGIDNVPRGQWEAAKACNLSGRQTWSHIIIPQAIPPM 145 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 IP L + ++ + K + L A+ +L++ ++ N + IE I + +L++S+ + Sbjct: 146 IPALANYFIAMFKETPLLSAITVLELMNQAKSVANTYYRYIEPITLVGAFFLAISLCSVI 205 Query: 384 FMNRLNAKIALKEK 397 + L + E+ Sbjct: 206 LLRWLERRYGKIER 219 >gi|167582028|ref|ZP_02374902.1| amino acid ABC transporter, permease protein [Burkholderia thailandensis TXDOH] gi|167620193|ref|ZP_02388824.1| amino acid ABC transporter, permease protein [Burkholderia thailandensis Bt4] gi|257139261|ref|ZP_05587523.1| amino acid ABC transporter, permease protein [Burkholderia thailandensis E264] Length = 219 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 38/127 (29%), Positives = 69/127 (54%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IALS AA+++E +R + + +GQ AA +LGL+ R+ R V+ PQA+R +P L++ Sbjct: 92 IALSANVAAYMSESMRGAINGIEKGQWLAAYSLGLSWRQTLRYVIGPQALRIAVPSLSNS 151 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++L+K++SL + +L+ II T Q + + L +Y L ++ Sbjct: 152 LISLIKDTSLVSVITVTELLRSAQEIIASTYQPLPLYLAAAGVYWVLCQILEWVQRWYER 211 Query: 391 KIALKEK 397 ++AL + Sbjct: 212 RLALPSR 218 >gi|311280247|ref|YP_003942478.1| polar amino acid ABC transporter, inner membrane subunit [Enterobacter cloacae SCF1] gi|308749442|gb|ADO49194.1| polar amino acid ABC transporter, inner membrane subunit [Enterobacter cloacae SCF1] Length = 238 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 41/137 (29%), Positives = 75/137 (54%), Gaps = 1/137 (0%) Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321 VSP F+ IALS +A+ ++ +R L AVP GQ E+ ALGL+ +++PQ R Sbjct: 101 VSP-FLCGVIALSLLYSAYASQTLRGALKAVPIGQWESGQALGLSKSAIFFRLVMPQMWR 159 Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 +P L +Q+L LLK+++L + DL+ +I +T + ++ IYL ++++ Sbjct: 160 HALPGLGNQWLVLLKDTALVSLISVNDLMLQTKSIATRTQEPFTWYIVAAAIYLVITLLS 219 Query: 382 ALFMNRLNAKIALKEKK 398 + R++ + E++ Sbjct: 220 QYILKRIDLRATRFERR 236 >gi|241895358|ref|ZP_04782654.1| L-cystine ABC superfamily ATP binding cassette transporter, membrane protein [Weissella paramesenteroides ATCC 33313] gi|241871332|gb|EER75083.1| L-cystine ABC superfamily ATP binding cassette transporter, membrane protein [Weissella paramesenteroides ATCC 33313] Length = 233 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 34/94 (36%), Positives = 59/94 (62%), Gaps = 1/94 (1%) Query: 257 IGGSTVSPE-FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315 +G S +SP +++ LS T A+ +E +R+ + ++P Q EAA ALG+T R+ ++ Sbjct: 89 LGISWLSPSGWIAAIWVLSLNTGAYASEAIRAAISSIPDTQREAAAALGMTDRQIFMRII 148 Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349 LPQA R IP L + +++L+K++SLA V ++ Sbjct: 149 LPQATRISIPTLANSFISLVKDTSLASVVTIVEM 182 >gi|769792|emb|CAA60103.1| artQ [Escherichia coli K-12] Length = 238 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 54/186 (29%), Positives = 95/186 (51%), Gaps = 8/186 (4%) Query: 217 KALPLLYISTFLIFGLPTLVLI---ALKYQLHFDK-PVLGQFNFIGGSTVSPEFMSLYIA 272 + LP + + F+ FG L+L L F + PV Q + I VSP F+ IA Sbjct: 55 RGLPEILVVLFIYFGSSQLLLTLSDGFTINLGFVQIPV--QMD-IENFDVSP-FLCGVIA 110 Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 LS AA+ ++ +R L AVP GQ E+ ALGL+ +++P +R +P L +Q+L Sbjct: 111 LSLLYAAYASQTLRGALKAVPVGQWESGQALGLSKSAIFFRLVMPADVRHALPGLGNQWL 170 Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 LLK+++L + DL+ +I +T + ++ IYL ++++ + R++ + Sbjct: 171 VLLKDTALVSLISVNDLMLQTKSIATRTQEPFTWYIVAAAIYLVITLLSQYILKRIDLRA 230 Query: 393 ALKEKK 398 E++ Sbjct: 231 TRFERR 236 >gi|308185787|ref|YP_003929918.1| ABC transport system, permease protein [Pantoea vagans C9-1] gi|308056297|gb|ADO08469.1| putative ABC transport system, permease protein [Pantoea vagans C9-1] Length = 222 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 37/102 (36%), Positives = 58/102 (56%) Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 A+ EI+R+G+ P+GQ EA LGLT + V+LP A++ I P L SQ + ++ Sbjct: 102 GAYSTEIIRAGIQVTPKGQWEAGRVLGLTRSQTFLRVVLPPALQRIYPALVSQCIIVMLG 161 Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379 SS+ V + +L I ++T + E+ L+ IYL+LSI Sbjct: 162 SSVVSQVSYEELTFAANLIQSRTFLSFEVYLVTTLIYLALSI 203 >gi|238027538|ref|YP_002911769.1| amino acid ABC transporter permease [Burkholderia glumae BGR1] gi|237876732|gb|ACR29065.1| Amino acid ABC transporter, permease protein [Burkholderia glumae BGR1] Length = 219 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 55/208 (26%), Positives = 101/208 (48%), Gaps = 18/208 (8%) Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249 VF + +VL+L H + A+ +Y+S L+ G P LV I + +++ P Sbjct: 29 MVFGLIAAVVLALMGIA-----HSRVLNAIARVYVS--LMRGTPLLVQI---FVIYYGLP 78 Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309 LG ++ P + IALS AA+++E +R + + GQ A+ +LGL+ + Sbjct: 79 SLG-------ISLDPTPAGV-IALSANVAAYMSESMRGAINGIESGQWLASYSLGLSWSQ 130 Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369 R V+ PQA+R +P L++ ++L+K++SL + +L+ II T Q + + L Sbjct: 131 TLRYVIGPQALRIAVPSLSNSLISLIKDTSLVSVITVTELLRSAQEIIASTYQPLPLYLA 190 Query: 370 WMFIYLSLSIMIALFMNRLNAKIALKEK 397 +Y L ++ ++AL + Sbjct: 191 AAAVYWVLCQILEWVQRWCERRLALPGR 218 >gi|331695543|ref|YP_004331782.1| ectoine/hydroxyectoine ABC transporter permease EhuC [Pseudonocardia dioxanivorans CB1190] gi|326950232|gb|AEA23929.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC [Pseudonocardia dioxanivorans CB1190] Length = 236 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 55/174 (31%), Positives = 86/174 (49%), Gaps = 18/174 (10%) Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226 FG FL+ P + T I VL IVLS F L+ +T + + +Y+ Sbjct: 4 FGTFLSVLSQGLPETLIATIGGI-----VLTIVLS-FGAGLALLSPSRTVRVIARVYVE- 56 Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286 GL + + ++F PVL F + P + + + L A+ AEIVR Sbjct: 57 ----GLRGTSEVVQLFWIYFALPVLVGFQLV------PIWAGILV-LGLNHGAYGAEIVR 105 Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340 + +VPR Q+E AIAL L+ + R V+LPQA+ +IPP + ++ LLK+++L Sbjct: 106 GAVQSVPRAQVEGAIALSLSPAQRMRRVILPQAVVEMIPPFNNLFIQLLKSTAL 159 >gi|227823544|ref|YP_002827517.1| putative permease component of ABC transporter protein [Sinorhizobium fredii NGR234] gi|227342546|gb|ACP26764.1| putative permease component of ABC transporter protein [Sinorhizobium fredii NGR234] Length = 220 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 37/108 (34%), Positives = 60/108 (55%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +AL AF AE R+ + AVPR Q++A IALGL + T ++LP A+R+ IP L + Sbjct: 94 LALGLNLMAFNAEAYRAAIQAVPREQLDAGIALGLNPLQRTLYIVLPTAVRASIPVLLTN 153 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378 + + + ++L V DL+ T+ +T + IE I +Y ++S Sbjct: 154 GIGIFQQTALVAIVAVQDLMYQAKTLATETYRPIETFTIVALVYFAVS 201 >gi|225026585|ref|ZP_03715777.1| hypothetical protein EUBHAL_00835 [Eubacterium hallii DSM 3353] gi|224956077|gb|EEG37286.1| hypothetical protein EUBHAL_00835 [Eubacterium hallii DSM 3353] Length = 136 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 32/98 (32%), Positives = 56/98 (57%) Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321 ++ F + IA AA+ +EI R G+ +V +GQ EA LG+T + ++L Q ++ Sbjct: 3 MNSRFTAAVIAFVINYAAYFSEIYRGGIESVSKGQYEAGQVLGMTKTQIFFKIILLQVIK 62 Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359 IIPPL+++ + L K++SLA +G A+++ Q Sbjct: 63 RIIPPLSNEVITLTKDTSLARIIGLAEIIMCAERFTKQ 100 >gi|206559442|ref|YP_002230203.1| histidine transport system permease [Burkholderia cenocepacia J2315] gi|198035480|emb|CAR51358.1| histidine transport system permease protein [Burkholderia cenocepacia J2315] Length = 229 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 49/189 (25%), Positives = 94/189 (49%), Gaps = 6/189 (3%) Query: 212 HEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQF-NFIGGSTVSPE-FMSL 269 H + +A+ Y T LI +P LVL+ L + + + L QF + +G + + + F++ Sbjct: 42 HNRVLRAIATGY--TTLIRSVPDLVLMLLLF--YSIQIWLNQFTDLVGWNQIDIDPFVAG 97 Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329 + L A+ E R ++VPRGQ+EA A G++ + ++ PQ MR +P + + Sbjct: 98 VLTLGFIYGAYFTETFRGAFLSVPRGQLEAGAAYGMSGARVFARIMFPQMMRFALPGIGN 157 Query: 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 + L+K ++L +G AD+V T IL+ IYL+++ + L + +L Sbjct: 158 NWQVLVKATALVSIIGLADVVKAAQDAGKSTFNMFFFILVAALIYLAITTVSNLVLIQLE 217 Query: 390 AKIALKEKK 398 + ++ + Sbjct: 218 KRYSMGVRH 226 >gi|294794720|ref|ZP_06759855.1| amino acid ABC transporter, permease protein [Veillonella sp. 3_1_44] gi|313894094|ref|ZP_07827660.1| ABC transporter, permease protein [Veillonella sp. oral taxon 158 str. F0412] gi|294454082|gb|EFG22456.1| amino acid ABC transporter, permease protein [Veillonella sp. 3_1_44] gi|313441658|gb|EFR60084.1| ABC transporter, permease protein [Veillonella sp. oral taxon 158 str. F0412] Length = 238 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 33/87 (37%), Positives = 54/87 (62%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P + +Y + + AA+ AEI+RS + AV G+ EAA +LG+T ++ ++LPQA Sbjct: 95 PGLVFVYAVFTLHIAAYSAEIMRSSIDAVAPGEKEAAKSLGMTEFQSYVRIILPQAFTMS 154 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLV 350 IPPLT+ + +LK ++L VG D++ Sbjct: 155 IPPLTNLVIGMLKGTALIFNVGVVDMM 181 >gi|121602538|ref|YP_988957.1| glutamate/aspartate ABC transporter, permease protein GltK [Bartonella bacilliformis KC583] gi|121602648|ref|YP_988988.1| glutamate/aspartate ABC transporter, permease protein GltK [Bartonella bacilliformis KC583] gi|120614715|gb|ABM45316.1| glutamate/aspartate ABC transporter, permease protein GltK [Bartonella bacilliformis KC583] gi|120614825|gb|ABM45426.1| glutamate/aspartate ABC transporter, permease protein GltK [Bartonella bacilliformis KC583] Length = 238 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 32/88 (36%), Positives = 57/88 (64%), Gaps = 8/88 (9%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I + + AA+ AEI+R+G+ ++ +GQ +A ALG+T+ + +V+LPQA R+++P +Q Sbjct: 113 ITFTAFEAAYFAEIMRAGIHSISQGQKQAGHALGMTYWQNMYIVILPQAFRNMLPVFLTQ 172 Query: 331 YLNLLKNSSLAVAV-------GFADLVS 351 + L ++++L A+ GF DLVS Sbjct: 173 VIILFQDTTLVYAISGNSLLNGF-DLVS 199 >gi|34498541|ref|NP_902756.1| histidine transport system permease [Chromobacterium violaceum ATCC 12472] gi|34104397|gb|AAQ60755.1| histidine transport system permease protein [Chromobacterium violaceum ATCC 12472] Length = 228 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 56/227 (24%), Positives = 110/227 (48%), Gaps = 25/227 (11%) Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF---LIFGLPTLVL 237 LT+ V S LG+V +LF + SR PL ++ F ++ G+P LV Sbjct: 15 LTLKLAGTALVVSVALGLVGALFKSSHSR----------PLTLLAEFYSTVVRGVPDLVW 64 Query: 238 IALKY---QLHFDKPVLGQFNFIGGSTVSPE---FMSLYIALSCYTAAFIAEIVRSGLIA 291 + L + Q+ + + G F + SP+ F + L A++ E R ++A Sbjct: 65 MFLLFFGAQMALND-LCGYFGW-----QSPDIDPFAAGVATLGFIFGAYMTETFRGAMMA 118 Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 V +GQMEA +A G+T + + LPQ +R +P ++ +L L+K+++L +G D++ Sbjct: 119 VHKGQMEAGLAYGMTPLRVFFRIQLPQMVRYALPSFSNNWLVLVKSTALVSVIGLNDVMY 178 Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 + T Q ++ ++ ++L ++ + L ++ L + ++ K+ Sbjct: 179 RADAAKSATQQPFDVYIVVGALFLVVTGVSNLLLHWLEKRYSMGTKE 225 >gi|238786386|ref|ZP_04630316.1| Arginine transport system permease protein artQ [Yersinia bercovieri ATCC 43970] gi|238712713|gb|EEQ04795.1| Arginine transport system permease protein artQ [Yersinia bercovieri ATCC 43970] Length = 238 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 62/204 (30%), Positives = 106/204 (51%), Gaps = 18/204 (8%) Query: 191 VFSFVLGIVLS-LFA----TRLSRHFHEKTG-----KALPLLYISTFLIFGLPTLVLI-- 238 V + LG+VL+ LFA +RL + TG + LP + + F+ FG L+++ Sbjct: 19 VCALALGLVLAMLFAVCESSRLKVVSYLTTGWVTILRGLPEILVVLFIYFGSSQLLMMLS 78 Query: 239 -ALKYQLH-FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296 L+ F+ P+ + N I VSP F+ IAL+ +A+ ++ +R L AVP GQ Sbjct: 79 DGFTLNLYLFELPI--KLN-IDDFEVSP-FLCGVIALALLYSAYASQTLRGALKAVPIGQ 134 Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356 E+ ALGL+ +++PQ R +P L +Q+L LLK+++L + DL+ +I Sbjct: 135 WESGQALGLSQAAIFFRLIMPQMWRHALPGLGNQWLVLLKDTALVSLISVNDLMLQTKSI 194 Query: 357 INQTGQAIEIILIWMFIYLSLSIM 380 +T + +I IYL ++++ Sbjct: 195 ATRTQEPFTWYMIAAAIYLVVTLL 218 >gi|306841172|ref|ZP_07473888.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Brucella sp. BO2] gi|306845330|ref|ZP_07477905.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Brucella sp. BO1] gi|306274246|gb|EFM56058.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Brucella sp. BO1] gi|306288798|gb|EFM60116.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Brucella sp. BO2] Length = 215 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 48/152 (31%), Positives = 78/152 (51%), Gaps = 11/152 (7%) Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290 G+P LV + L Y L PV+G P ++ + + +A+I+EI R ++ Sbjct: 63 GVPLLVQLLLFYYLL---PVIG--------IDVPALVAAVVTVGICASAYISEIWRGAIV 111 Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 A+P+GQ EAA A+G+ R V+LPQA +P L ++ + L+K SSL VG +L Sbjct: 112 ALPKGQSEAATAIGMGPRDIWVRVVLPQAFTMSLPALVNELILLVKASSLVSVVGILELT 171 Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382 T + +E+ L IYL +++ +A Sbjct: 172 RASQAQAAMTFRPLEVYLAAACIYLLINLCLA 203 >gi|289672220|ref|ZP_06493110.1| amino acid ABC transporter permease [Pseudomonas syringae pv. syringae FF5] Length = 188 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 32/115 (27%), Positives = 64/115 (55%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + IAL A+ E+ R ++A+P+G EA +ALG++ + ++LPQ R +P Sbjct: 53 FAAGVIALGICFGAYATEVFRGAILAIPKGHREAGLALGMSRSRILFKLVLPQMWRIALP 112 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380 L + ++ L+K+++L +G +++ + T QA ++ F+YL L+++ Sbjct: 113 GLGNLFMILMKDTALVSVIGLEEIMRHAQIAVGFTKQAFTFYMVAAFMYLGLTVL 167 >gi|237653224|ref|YP_002889538.1| polar amino acid ABC transporter inner membrane subunit [Thauera sp. MZ1T] gi|237624471|gb|ACR01161.1| polar amino acid ABC transporter, inner membrane subunit [Thauera sp. MZ1T] Length = 244 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 48/181 (26%), Positives = 90/181 (49%), Gaps = 9/181 (4%) Query: 226 TFLIFGLPTLVLIALKY----QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281 T+ G P LV + L Y Q + + + + P F +L+ A T A+ Sbjct: 60 TYFFRGTPMLVQLLLVYYGASQWEWMRAAWEAGHPLWSLFREPYFCALF-AFGLNTCAYT 118 Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341 EI+ + P G++EAA A+G+T KA + +++P A+R +IP +++ + +L+ S++A Sbjct: 119 VEILAGSMRNTPHGELEAAKAMGMTRLKALQRIVIPSALRRMIPSYSNEVILMLQGSAIA 178 Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI-MIALFM---NRLNAKIALKEK 397 AV DL + ++ E + IYL+L+ ++ LF +R A +A ++ Sbjct: 179 SAVTLVDLTGAARNVYSRHFAPFESFVFVGLIYLALTFALVGLFKLAEHRWLAHLAPRKA 238 Query: 398 K 398 + Sbjct: 239 E 239 >gi|134296591|ref|YP_001120326.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia vietnamiensis G4] gi|134139748|gb|ABO55491.1| amino acid ABC transporter membrane protein 1, PAAT family [Burkholderia vietnamiensis G4] Length = 229 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 48/180 (26%), Positives = 86/180 (47%), Gaps = 10/180 (5%) Query: 224 ISTFLIFGLPTLVLI-----ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTA 278 + T LI G+P LVL+ +L+ L+ LG + P F++ + L Sbjct: 52 VYTTLIRGVPDLVLMLLLFYSLQIWLNMATDALGWDQI----DIDP-FLAGVLVLGFIYG 106 Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338 A+ E R ++VPRGQ+EA A G+T+ + ++ PQ MR +P + + + L+K++ Sbjct: 107 AYFTETFRGAFLSVPRGQLEAGSAYGMTNWQVFTRIMFPQMMRFALPGIGNNWQVLVKST 166 Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 +L +G AD+V T + LI +YL+++ M + L + + +K Sbjct: 167 ALVSIIGLADVVKASQDAGKGTLRFFFFTLIAGAVYLAITTMSNFVLMWLEKRYSTGVRK 226 >gi|325689403|gb|EGD31408.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK115] Length = 225 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 48/185 (25%), Positives = 87/185 (47%), Gaps = 23/185 (12%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY---QLHFD 247 + S +LG + T H K + L Y+ I +P LVL+ L Y +FD Sbjct: 34 IISLILGTFFGIIMTS-----HSKVVRFLSRAYLE--FIRVMPQLVLLFLVYFGLARNFD 86 Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307 + G+ +S I S + A + ++VR + ++P+ Q E+ ALGL+ Sbjct: 87 INISGE-------------LSAIIVFSLWGTAEMGDLVRGAITSLPKHQFESGQALGLSQ 133 Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367 R+ +++PQ +R ++P + ++K +SL V +G ++V VG II+ +I Sbjct: 134 RQLYVYIIIPQVLRRLLPQAINLITRMIKTTSLIVLIGVIEVVKVGQQIIDSNRLSIPSA 193 Query: 368 LIWMF 372 W++ Sbjct: 194 AFWIY 198 >gi|190895403|ref|YP_001985695.1| octopine ABC transporter, permease protein [Rhizobium etli CIAT 652] gi|190699348|gb|ACE93432.1| octopine ABC transporter, permease protein [Rhizobium etli CIAT 652] Length = 234 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 42/135 (31%), Positives = 75/135 (55%), Gaps = 4/135 (2%) Query: 251 LGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306 LGQF I S + P + ++L+ TA + AEI R G+ AV ++EAA ++G++ Sbjct: 76 LGQFGVIRYSFIWPFLREPMVCAVLSLALCTAGYTAEIFRGGIRAVSPKEIEAARSIGMS 135 Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 R +L P A R +P +++ + ++K+++LA V ++ V +I+QT + +E+ Sbjct: 136 GFLMVRRILAPIAFRHALPAYSTEIVLMMKSTALASLVTVWEVTGVAQRLISQTYRTMEV 195 Query: 367 ILIWMFIYLSLSIMI 381 L IYL L+ +I Sbjct: 196 FLCAAIIYLVLNFII 210 >gi|307544954|ref|YP_003897433.1| ABC transporter permease [Halomonas elongata DSM 2581] gi|307216978|emb|CBV42248.1| ABC-type transport system permease protein [Halomonas elongata DSM 2581] Length = 259 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 37/121 (30%), Positives = 64/121 (52%) Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329 ++AL+ A + E++R G VP+G++EAA +LG+ R + LP+A++ ++P L Sbjct: 130 FVALTLSFAGYEGEVMRGGFAGVPKGELEAARSLGMHPLTILRRIWLPRAVQRVLPTLNG 189 Query: 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 + + LK + L + D +V G I +T E +L+ IYL L+ +I L L Sbjct: 190 ELIIQLKATPLVATIAAVDTYAVFGRIRQETYMVYEPLLLMALIYLILAGLITLAFGALE 249 Query: 390 A 390 Sbjct: 250 C 250 >gi|304393286|ref|ZP_07375214.1| octopine transport system permease protein OccM [Ahrensia sp. R2A130] gi|303294293|gb|EFL88665.1| octopine transport system permease protein OccM [Ahrensia sp. R2A130] Length = 232 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 33/115 (28%), Positives = 65/115 (56%) Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 AA+ I+R +VP+G++EAA A+G+ R + LP+A+++++P L + + LK+ Sbjct: 112 AAYEGHIMRGAFASVPKGELEAARAMGMGRFTVLRRIWLPRAIQNVLPTLAGEAVLTLKS 171 Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 LA + D+ VGG + +T + E ++ FIYL ++ ++ + L ++ Sbjct: 172 VPLASTITIFDVFGVGGIVRQETYRIYEPLIFVGFIYLLITAVLVVLFRWLENRV 226 >gi|260439248|ref|ZP_05793064.1| amino acid ABC transporter, amino acid-binding/permease protein, His/Glu/Gln/Arg/opine family [Butyrivibrio crossotus DSM 2876] gi|292808262|gb|EFF67467.1| amino acid ABC transporter, amino acid-binding/permease protein, His/Glu/Gln/Arg/opine family [Butyrivibrio crossotus DSM 2876] Length = 236 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 28/73 (38%), Positives = 52/73 (71%) Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 +AA+I+EI+R G+++V GQMEA A+GL+ +++PQA+++I+P + ++ + L+K Sbjct: 114 SAAYISEIMRGGIMSVDSGQMEAGRAVGLSFGTTMLKIVIPQAVKNILPTMGNELIALIK 173 Query: 337 NSSLAVAVGFADL 349 ++S+ VG DL Sbjct: 174 DTSVVSFVGATDL 186 >gi|126641443|ref|YP_001084427.1| ArtM protein [Acinetobacter baumannii ATCC 17978] Length = 178 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 49/181 (27%), Positives = 96/181 (53%), Gaps = 21/181 (11%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 KAL LY+ I +P LVL+ + Y F F + + +F ++++ + + Sbjct: 9 KALCRLYLEAIRI--IPILVLLFVFY-----------FGF--ATWFNWQFSAMWVCVVVF 53 Query: 277 T---AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333 A + ++VR+ + ++ + Q ++A ALGLTH +A V+ PQ+++ + P + + Sbjct: 54 VLWGTAEMGDLVRAAITSIDQHQRDSAYALGLTHVQALIYVIFPQSLKRVTPGAINLFTR 113 Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM--FIYLSLSIMIALFMNRLNAK 391 ++K SSLAV +G +++ VG II + + +W+ FI++ L +I ++RL A Sbjct: 114 MVKTSSLAVLIGVVEVIKVGQQIIENSLLTVPSASLWIYGFIFI-LYFLICYPLSRLAAH 172 Query: 392 I 392 + Sbjct: 173 L 173 >gi|330958425|gb|EGH58685.1| amino acid ABC transporter permease [Pseudomonas syringae pv. maculicola str. ES4326] Length = 225 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 36/93 (38%), Positives = 53/93 (56%), Gaps = 3/93 (3%) Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 +A+ +EI+RS LI V +GQ +A AL A R ++LPQA+ +IPP+ +Q + LLK Sbjct: 103 SAYGSEIIRSALINVSQGQRDAVRALDFGPVSAFRRIILPQALPFMIPPMGNQLVELLKT 162 Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370 +SL + DL G ++ GQ LIW Sbjct: 163 TSLVSLITLTDLTFSGSQLVTTLGQQ---TLIW 192 >gi|330954815|gb|EGH55075.1| amino acid ABC transporter permease [Pseudomonas syringae Cit 7] Length = 231 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 49/180 (27%), Positives = 87/180 (48%), Gaps = 23/180 (12%) Query: 214 KTGKALPLLYI-STF--LIFGLPTLVLIALKY----------QLHFDKPVLGQFNFIGGS 260 KT PL ++ ST+ L+ G+P L+ + L Y FD P L F G Sbjct: 41 KTSPYKPLQWLGSTYSTLVRGIPELLWVLLIYFGTVNGMRALGKLFDIPDLALSAFAAG- 99 Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320 IAL A+ E+ R ++A+P+G EA +ALG++ + ++LPQ Sbjct: 100 ---------VIALGICFGAYATELFRGAILAIPKGHREAGLALGMSRSRILFKLVLPQMW 150 Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380 R +P L + ++ L+K+++L +G +++ + T QA ++ F+YL L+++ Sbjct: 151 RIALPGLGNLFMILMKDTALVSVIGLEEIMRHAQIAVGFTKQAFTFYMVAAFMYLGLTVL 210 >gi|320546922|ref|ZP_08041224.1| ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus equinus ATCC 9812] gi|320448440|gb|EFW89181.1| ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus equinus ATCC 9812] Length = 225 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 31/102 (30%), Positives = 57/102 (55%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I S + A + ++VR L ++P+ Q+E+ ALGL +R+ V++PQ +R ++P + Sbjct: 97 IVFSMWGTAEMGDLVRGALTSLPKYQIESGFALGLNNRQLFIYVVMPQILRQLLPQAVNL 156 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372 ++K +SL V +G ++V VG II + IW++ Sbjct: 157 MTRMIKTTSLIVLIGVVEVVKVGQEIIEANRLTVPSTAIWIY 198 >gi|298291225|ref|YP_003693164.1| polar amino acid ABC transporter inner membrane subunit [Starkeya novella DSM 506] gi|296927736|gb|ADH88545.1| polar amino acid ABC transporter, inner membrane subunit [Starkeya novella DSM 506] Length = 248 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 44/122 (36%), Positives = 68/122 (55%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IALS + AF EI RSG+ AVP+ +EAA ALG T KA V+LP A+R +P L + Sbjct: 120 IALSLFAGAFNVEIFRSGIEAVPKTTVEAAEALGYTRLKAYVYVILPLALRVCLPALNNN 179 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 +NLLK ++LA A+ + + I +++ E++L+ Y L ++ M+R Sbjct: 180 LVNLLKTTTLAYAIAVPETLYAVKQIWSESQNVFEMMLVLFVTYGILVGILVWIMHRWEK 239 Query: 391 KI 392 + Sbjct: 240 SL 241 >gi|220928329|ref|YP_002505238.1| polar amino acid ABC transporter inner membrane subunit [Clostridium cellulolyticum H10] gi|219998657|gb|ACL75258.1| polar amino acid ABC transporter, inner membrane subunit [Clostridium cellulolyticum H10] Length = 210 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 27/85 (31%), Positives = 52/85 (61%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 F + IA AA+ AEI R G+ ++P+GQ EA LG T + ++LPQ ++ ++ Sbjct: 80 RFTAAVIAFILNYAAYFAEIFRGGIESIPKGQYEAGEVLGFTKLQVFFKIILPQVIKRVL 139 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADL 349 PP++++ + L+K+++L +G ++ Sbjct: 140 PPISNEVITLVKDTALVTVIGVEEM 164 >gi|91780749|ref|YP_555956.1| polar amino acid ABC transporter inner membrane protein [Burkholderia xenovorans LB400] gi|91693409|gb|ABE36606.1| amino acid ABC transporter membrane protein, PAAT family [Burkholderia xenovorans LB400] Length = 218 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 35/102 (34%), Positives = 61/102 (59%) Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 + ++AEI R+G+ AV GQ EAA ++G+ K V+LPQA++ +PP ++ + +LK+ Sbjct: 98 STYVAEIFRAGIEAVDPGQYEAAQSIGMGRVKTMVRVILPQAIKVALPPYSNTLVMMLKD 157 Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379 SSLA + A++ G I T Q + + + YL++S+ Sbjct: 158 SSLASTITVAEMTREGQLIAASTFQNLTVYTLVAIGYLAMSL 199 >gi|295106092|emb|CBL03635.1| amino acid ABC transporter membrane protein, PAAT family (TC 3.A.1.3.-) [Gordonibacter pamelaeae 7-10-1-b] Length = 217 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 32/119 (26%), Positives = 68/119 (57%), Gaps = 9/119 (7%) Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 AA+ EI R G+ ++PRGQ EAA LG + + ++LPQ ++ I+P ++++ + L+K+ Sbjct: 99 AAYFGEIYRGGIQSIPRGQYEAAEVLGYSKLQTFMKIVLPQVVKRILPAMSNEIITLVKD 158 Query: 338 SSLAVAVGFADLVS----VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 +SLA +G ++ S + + ++ I ++ W+F + ++ + + R+ K+ Sbjct: 159 TSLAFVLGIMEMFSQAKAIAASQVSMLPYVIAGVIYWVF-----NFIVEIVLTRIEKKL 212 >gi|259418369|ref|ZP_05742287.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Silicibacter sp. TrichCH4B] gi|259345764|gb|EEW57608.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Silicibacter sp. TrichCH4B] Length = 224 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 28/81 (34%), Positives = 53/81 (65%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + L+ + +A++AE +R+ ++ V R Q EAA A+G+T + R ++LPQA R P L + Sbjct: 97 MGLTLHFSAYMAESIRAAILGVDRSQWEAAQAVGMTQGQMMRQIILPQAARVAAPTLVNY 156 Query: 331 YLNLLKNSSLAVAVGFADLVS 351 +++++K +SLA +G +L+ Sbjct: 157 FIDMIKGTSLAFTLGVTELMG 177 >gi|298290177|ref|YP_003692116.1| polar amino acid ABC transporter inner membrane subunit [Starkeya novella DSM 506] gi|296926688|gb|ADH87497.1| polar amino acid ABC transporter, inner membrane subunit [Starkeya novella DSM 506] Length = 221 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 41/139 (29%), Positives = 71/139 (51%), Gaps = 1/139 (0%) Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312 F I G +P F + L+ Y +A+ EIVRSG +AVP AA +LG+T R+ Sbjct: 79 SFKTIVGINWAP-FTVSCVVLALYMSAYCTEIVRSGFLAVPSTTRRAARSLGMTWRQDLT 137 Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372 ++ P A+R +P L ++K++++ +G +L+ I+ + + + ++ I Sbjct: 138 DIVFPIALRVALPSWIGLTLGVMKDTAMVWWIGVVELLRSSQVIVTRIQEPLFVLSIAGL 197 Query: 373 IYLSLSIMIALFMNRLNAK 391 IY +S IA RL A+ Sbjct: 198 IYFLMSFPIARLGARLEAR 216 >gi|325062400|gb|ADY66090.1| polar amino acid uptake family ABC transporter, permease protein [Agrobacterium sp. H13-3] Length = 238 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 41/128 (32%), Positives = 68/128 (53%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F I+LS + A E RSG+ +PR +EAA +LG + V P A+R +P Sbjct: 103 FACASISLSLFGGALAIEAFRSGIETMPRSIIEAARSLGYSRWSRFWKVEAPIAVRISLP 162 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 +T+ NL K +S A + +L+ G I N T + +E++++ + IY+ L ++ M Sbjct: 163 AITNILTNLFKTTSQASVITVPELMYYAGQIYNDTFRTLEVMILVLVIYVGLVSILTFAM 222 Query: 386 NRLNAKIA 393 +RL A +A Sbjct: 223 SRLEAWMA 230 >gi|313890259|ref|ZP_07823893.1| putative glutamine ABC transporter, permease protein GlnP [Streptococcus pseudoporcinus SPIN 20026] gi|313121364|gb|EFR44469.1| putative glutamine ABC transporter, permease protein GlnP [Streptococcus pseudoporcinus SPIN 20026] Length = 215 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 29/73 (39%), Positives = 48/73 (65%) Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 A + +T+A +AEI+R GL V GQ EA +A GL + L++ PQA R ++P + SQ+ Sbjct: 87 AFTVFTSAALAEIIRGGLNGVDNGQTEAGLAQGLRPSQVFLLIVFPQAYRKMLPAIISQF 146 Query: 332 LNLLKNSSLAVAV 344 + ++K++SL +V Sbjct: 147 VTVIKDTSLLYSV 159 Score = 40.4 bits (93), Expect = 0.47, Method: Compositional matrix adjust. Identities = 20/54 (37%), Positives = 32/54 (59%) Query: 96 TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 T +++F +I +TI GTL+ R NK V + Y+E RN+P L+ IF ++ Sbjct: 20 TLYISFISIILSTIFGTLLAIMRNGKNKFVKLLASFYIEFVRNVPNLLWIFIIF 73 >gi|239833264|ref|ZP_04681592.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium LMG 3301] gi|239821327|gb|EEQ92896.1| amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium LMG 3301] Length = 225 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 42/115 (36%), Positives = 64/115 (55%), Gaps = 1/115 (0%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +AL+ A+ AEI+R+G ++ GQ EA LGL+ + V L AM + P LTSQ Sbjct: 93 VALTVNVGAYTAEIMRAGFDSIQEGQWEAGECLGLSSTQLYWHVGLRPAMERVYPALTSQ 152 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI-MIALF 384 ++ L+ SS+ + +L + G I ++T + E L+ IYL LS+ M ALF Sbjct: 153 FILLMLASSVTSQISAEELTAAGNFIQSETYRPFETYLVIAVIYLFLSLGMRALF 207 >gi|254444336|ref|ZP_05057812.1| ABC transporter, permease protein, putative [Verrucomicrobiae bacterium DG1235] gi|198258644|gb|EDY82952.1| ABC transporter, permease protein, putative [Verrucomicrobiae bacterium DG1235] Length = 262 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 53/204 (25%), Positives = 95/204 (46%), Gaps = 9/204 (4%) Query: 194 FVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ 253 F+ G ++++ + LS F G L Y S FL P L + ++ P+L Q Sbjct: 59 FIEGWLVTVLVSSLSLAFACLIGGLSALAYRSRFL----PLRYLFKIYVEITRGTPLLVQ 114 Query: 254 -----FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308 + F + + ++ I LS ++ A+++EI R+G+ +V Q+ +A ++G T Sbjct: 115 MLLIFYVFADAAHIENRYVVGIIILSLFSGAYVSEIFRAGIESVGSSQLLSAKSIGFTPY 174 Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368 + R V+ PQA+ +P L Q+ NL+K+SSL + ++ + T A E Sbjct: 175 QTFRYVIFPQALSRSLPALAGQFANLIKDSSLLSIIAISEFTLNAQEVNTSTLSAFESFF 234 Query: 369 IWMFIYLSLSIMIALFMNRLNAKI 392 YL L++ I RL ++ Sbjct: 235 PLAIGYLLLTLPIFHLSRRLEKQL 258 >gi|296272954|ref|YP_003655585.1| polar amino acid ABC transporter inner membrane subunit [Arcobacter nitrofigilis DSM 7299] gi|296097128|gb|ADG93078.1| polar amino acid ABC transporter, inner membrane subunit [Arcobacter nitrofigilis DSM 7299] Length = 221 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 42/156 (26%), Positives = 84/156 (53%), Gaps = 5/156 (3%) Query: 237 LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296 L+A + L+F P + F F+ T + + IAL+ T++F+AE +R L ++ +GQ Sbjct: 67 LVAQLFILYFGLPSI--FPFLESMTA---YEATVIALTLNTSSFMAEDLRGALESIDKGQ 121 Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356 EA ++G+T + + V+LPQA +P + ++++ ++K ++L VG AD+++ Sbjct: 122 NEACYSMGMTKFQTMKRVILPQAFIFALPSIGNRFIGIIKGTALGFTVGLADIMAKSKIE 181 Query: 357 INQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 + + E L IYL L I++ + + ++ Sbjct: 182 AALSLRFFEAYLCVTIIYLVLVIIVERVLKYIEKRV 217 >gi|91784299|ref|YP_559505.1| ABC polar amino acid transporter, inner membrane subunit [Burkholderia xenovorans LB400] gi|91688253|gb|ABE31453.1| amino acid ABC transporter membrane protein, PAAT family [Burkholderia xenovorans LB400] Length = 218 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 66/213 (30%), Positives = 107/213 (50%), Gaps = 26/213 (12%) Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL--IFGLPTLVLIALKYQLHFD 247 FV S LG+VL+L +R +TF+ I GLP +V + + ++F Sbjct: 28 FVLSTALGLVLALMRVSGNRVVSNAA---------ATFINVIRGLPIIVQL---FYIYFV 75 Query: 248 KPVLG-QFN-FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305 P LG Q + F GS + L +A S Y A E R+G+ A+ GQ+EAA ++G+ Sbjct: 76 LPDLGVQLSAFQAGS------IGLGVAYSVYQA----ENFRAGIQAIDHGQIEAAQSIGM 125 Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365 R V+LPQA R +P + + +LK+SSLA + A++ G I + T Q + Sbjct: 126 RGAMIMRRVVLPQAFRISLPAYGNTLVMMLKDSSLASTITVAEMTRAGQLIASSTFQNMT 185 Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 + + +YL LS+ + + R+ ++ LK K+ Sbjct: 186 VFTLVALLYLGLSLPLVYGLRRIERRLGLKGKR 218 >gi|260424825|ref|ZP_05779011.1| glutamine ABC transporter, permease protein [Dialister invisus DSM 15470] gi|260403293|gb|EEW96840.1| glutamine ABC transporter, permease protein [Dialister invisus DSM 15470] Length = 244 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 63/221 (28%), Positives = 99/221 (44%), Gaps = 40/221 (18%) Query: 182 TMDTNAKIFVFSFVLGIVLSLFATR-------LSRHFHEKTGKALPLLYISTFLIFGLPT 234 T+ A SF+ G+V+S+ R LS + E + + PLL FL FGLP Sbjct: 41 TLGIGAAGIFLSFLAGLVISVIRYRKIPFLLPLSTAYVELS-RNTPLLVQLFFLYFGLP- 98 Query: 235 LVLIALKYQLHFDKPVLGQ--FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292 K +H F+GGS ++AE +RSG+ +V Sbjct: 99 ------KAGIHISGETCAAAGLTFLGGS-------------------YMAEALRSGIESV 133 Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352 Q E+A ALGLT + R V+ PQA +PPL + L L+K +S+ DL+ + Sbjct: 134 SVSQYESAAALGLTEHQIFRFVVFPQAFTVSLPPLCANVLFLIKETSVFSVCAVPDLMYI 193 Query: 353 GGTIIN---QTGQAIEIILI-WMFIYLSLSIMIALFMNRLN 389 +I +T + + +++I ++ I L +S +L RL Sbjct: 194 AKDLIGLYYKTDETLWMLVISYLIILLPISAGSSLLERRLR 234 >gi|193077067|gb|ABO11825.2| ArtM protein [Acinetobacter baumannii ATCC 17978] Length = 206 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 49/181 (27%), Positives = 96/181 (53%), Gaps = 21/181 (11%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 KAL LY+ I +P LVL+ + Y F F + + +F ++++ + + Sbjct: 37 KALCRLYLEAIRI--IPILVLLFVFY-----------FGF--ATWFNWQFSAMWVCVVVF 81 Query: 277 T---AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333 A + ++VR+ + ++ + Q ++A ALGLTH +A V+ PQ+++ + P + + Sbjct: 82 VLWGTAEMGDLVRAAITSIDQHQRDSAYALGLTHVQALIYVIFPQSLKRVTPGAINLFTR 141 Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM--FIYLSLSIMIALFMNRLNAK 391 ++K SSLAV +G +++ VG II + + +W+ FI++ L +I ++RL A Sbjct: 142 MVKTSSLAVLIGVVEVIKVGQQIIENSLLTVPSASLWIYGFIFI-LYFLICYPLSRLAAH 200 Query: 392 I 392 + Sbjct: 201 L 201 Score = 36.2 bits (82), Expect = 8.8, Method: Compositional matrix adjust. Identities = 20/51 (39%), Positives = 30/51 (58%) Query: 99 LAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149 +AF + + I GT+ G S N +V +CR+Y+E R IP LV++F Y Sbjct: 10 IAFISVFFSAIFGTVFGVIMTSKNIVVKALCRLYLEAIRIIPILVLLFVFY 60 >gi|329937973|ref|ZP_08287455.1| amino acid ABC transporter transmembrane protein [Streptomyces griseoaurantiacus M045] gi|329302930|gb|EGG46819.1| amino acid ABC transporter transmembrane protein [Streptomyces griseoaurantiacus M045] Length = 216 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 51/171 (29%), Positives = 82/171 (47%), Gaps = 28/171 (16%) Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252 SF LG+V +L +R G + T I P LV QL F VL Sbjct: 33 SFALGLVWALLMRTPTRWVRWPVG-------VVTEFIRNTPLLV------QLFFLFYVLP 79 Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312 ++N + + F A+ + + + ++ R+G+ AVP GQ EAA AL L R+ Sbjct: 80 EWNITFSALTTGVF-----AIGLHYSTYTMQVYRAGIEAVPVGQWEAATALNLPLRRTWT 134 Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363 V+LPQA+R ++P L + +++LK++ L +A+ T++ GQA Sbjct: 135 AVILPQAIRRVVPALGNYVISMLKDTPLLMAI----------TVLEMLGQA 175 >gi|313667602|ref|YP_004047886.1| ABC transporter [Neisseria lactamica ST-640] gi|313005064|emb|CBN86496.1| putative ABC transporter [Neisseria lactamica 020-06] Length = 222 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 28/85 (32%), Positives = 53/85 (62%) Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335 + A + ++VR L ++ + Q+E+ +ALGL+ R+ R + LPQ++R ++P + + ++ Sbjct: 99 WGVAEMGDLVRGALESIEKHQVESGLALGLSRRQVFRYIELPQSVRRVLPGAVNLFTRMI 158 Query: 336 KNSSLAVAVGFADLVSVGGTIINQT 360 K SSLA +G ++V VG II + Sbjct: 159 KTSSLASLIGVIEVVKVGQQIIENS 183 >gi|77461681|ref|YP_351188.1| amino acid ABC transporter permease [Pseudomonas fluorescens Pf0-1] gi|77385684|gb|ABA77197.1| amino acid ABC transporter membrane protein 1, PAAT family [Pseudomonas fluorescens Pf0-1] Length = 226 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 47/172 (27%), Positives = 84/172 (48%), Gaps = 24/172 (13%) Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279 P L F+ FGLP+L G +S E+ + +A+ A Sbjct: 68 PFLVQLFFIFFGLPSL-----------------------GVQIS-EWQAAVLAMVINLGA 103 Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339 + EI+R+G+ A+PRGQ+EAA AL ++ +A R V+L A+ + P L+SQ + ++ S+ Sbjct: 104 YSTEIIRAGIQAIPRGQLEAAAALAMSRFEAFRHVVLLPALGKVWPALSSQIIIVMLGSA 163 Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 + + +L I ++ +A E + IYL ++++I +N L + Sbjct: 164 VCSQIATEELSFAANFIQSRNFRAFETYALTTLIYLCMALLIRQLLNWLGRR 215 >gi|83942406|ref|ZP_00954867.1| amino acid ABC transproter, permease protein [Sulfitobacter sp. EE-36] gi|83953626|ref|ZP_00962347.1| amino acid ABC transproter, permease protein [Sulfitobacter sp. NAS-14.1] gi|83841571|gb|EAP80740.1| amino acid ABC transproter, permease protein [Sulfitobacter sp. NAS-14.1] gi|83846499|gb|EAP84375.1| amino acid ABC transproter, permease protein [Sulfitobacter sp. EE-36] Length = 224 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 28/81 (34%), Positives = 53/81 (65%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + L+ + +A++AE +R+ ++ V R Q EAA A+G+T + R ++LPQA R P L + Sbjct: 97 MGLTLHFSAYMAESIRAAILGVDRSQWEAAQAVGMTQGQMMRQIILPQASRVAAPTLVNY 156 Query: 331 YLNLLKNSSLAVAVGFADLVS 351 +++++K +SLA +G +L+ Sbjct: 157 FIDMIKGTSLAFTLGVTELMG 177 >gi|18310307|ref|NP_562241.1| amino acid ABC transporter [Clostridium perfringens str. 13] gi|110800931|ref|YP_695975.1| His/Glu/Gln/Arg/opine ABC transporter permease [Clostridium perfringens ATCC 13124] gi|18144987|dbj|BAB81031.1| probable amino acid ABC transporter [Clostridium perfringens str. 13] gi|110675578|gb|ABG84565.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Clostridium perfringens ATCC 13124] Length = 213 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 31/98 (31%), Positives = 54/98 (55%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 F + IA + AA+ EI RSG+ + RGQ EA+ LGL+ + ++LPQ+ + + Sbjct: 83 RFPAAIIAFTLNYAAYFGEIFRSGIKDIDRGQFEASKILGLSKWFTFKKIILPQSFKKTL 142 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362 P + ++ + L+K++SL VG +L+ G N+ Sbjct: 143 PSIANEVITLVKDTSLVYVVGIGELLRAGKIASNRDAS 180 >gi|330817962|ref|YP_004361667.1| histidine transport system permease [Burkholderia gladioli BSR3] gi|327370355|gb|AEA61711.1| histidine transport system permease [Burkholderia gladioli BSR3] Length = 229 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 56/186 (30%), Positives = 88/186 (47%), Gaps = 10/186 (5%) Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFAT--RLSRHFHEKTGKALPLLYIST 226 MFL G + T T K+ V S +L +L L +LSR+ + + LY T Sbjct: 1 MFLQGYGPLILSGTWQT-VKLAVLSLILSFILGLLGAGAKLSRN---RVTNGIGTLY--T 54 Query: 227 FLIFGLPTLVLIALK-YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285 LI G+P LVL+ L Y + L + P F + + L A+ E Sbjct: 55 TLIRGVPDLVLMLLLFYSIQIWLNQLTDMMSWDQIDIDP-FAAGVLVLGFIYGAYFTETF 113 Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345 R ++VPRGQ+EA A G++ + V+ PQ MR +P + + + L+K+++L +G Sbjct: 114 RGAFLSVPRGQLEAGAAYGMSSWQVFTRVMFPQMMRFALPGIGNNWQVLVKSTALVSIIG 173 Query: 346 FADLVS 351 AD+V Sbjct: 174 LADVVK 179 >gi|296272082|ref|YP_003654713.1| polar amino acid ABC transporter inner membrane subunit [Arcobacter nitrofigilis DSM 7299] gi|296096257|gb|ADG92207.1| polar amino acid ABC transporter, inner membrane subunit [Arcobacter nitrofigilis DSM 7299] Length = 224 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 52/202 (25%), Positives = 99/202 (49%), Gaps = 15/202 (7%) Query: 195 VLGIVLSLFATRL---SRHFHEKTGKALPLLYISTFLIFGLPTLV-LIALKYQLHFDKPV 250 ++G V++LF L + + K LYIS + G P LV L L Y L PV Sbjct: 28 LIGTVIALFIAILIAIMKTYKVKVISQFCDLYIS--FLRGTPLLVQLFLLYYGLPQIFPV 85 Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 + S LS + +A++AE +R + ++ +GQ EA+ +LGL++ + Sbjct: 86 FANLDSYSASIA---------GLSLHFSAYMAESIRGAISSIDKGQFEASSSLGLSNTQT 136 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370 ++LPQA+R +P L + +++L+K++SLA +G ++++ + + + E L Sbjct: 137 FIYIILPQAIRVAVPSLMNNFIDLIKSTSLAFTLGVPEIMAKAQLEASSSYKYFESFLAV 196 Query: 371 MFIYLSLSIMIALFMNRLNAKI 392 +Y + ++ +L K+ Sbjct: 197 ALVYWVIVLVFTYIQKKLEKKL 218 >gi|288934310|ref|YP_003438369.1| polar amino acid ABC transporter inner membrane subunit [Klebsiella variicola At-22] gi|288889039|gb|ADC57357.1| polar amino acid ABC transporter, inner membrane subunit [Klebsiella variicola At-22] Length = 250 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 37/111 (33%), Positives = 62/111 (55%) Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 ALS +A+ AE R+G AV +GQ EAA ++GL+ R ++ PQA S +P TS Sbjct: 106 ALSLIFSAYFAETFRAGWNAVDKGQREAAWSIGLSGFTQFRRIIFPQAAVSALPNFTSVL 165 Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382 ++L+K++SL + DL++ + +E + + IY++L + IA Sbjct: 166 IDLIKDTSLVYTITVIDLMAKANIAAARGFHFVEAYCVVLVIYIALCLAIA 216 >gi|239941506|ref|ZP_04693443.1| putative amino acid ABC transporter permease protein [Streptomyces roseosporus NRRL 15998] gi|239987970|ref|ZP_04708634.1| putative amino acid ABC transporter permease protein [Streptomyces roseosporus NRRL 11379] gi|291444950|ref|ZP_06584340.1| ABC polar amino acid family transporter [Streptomyces roseosporus NRRL 15998] gi|291347897|gb|EFE74801.1| ABC polar amino acid family transporter [Streptomyces roseosporus NRRL 15998] Length = 213 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 36/134 (26%), Positives = 71/134 (52%), Gaps = 1/134 (0%) Query: 260 STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319 +TV P ++ + + L + AA+ +E+ R+G+ VP+GQ EA AL L+ R+ + V+LPQA Sbjct: 80 NTVEPLYIGIAV-LGIHYAAYTSEVYRAGIDGVPKGQWEACRALSLSPRRTWQAVILPQA 138 Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379 +R+++P L + +++ K + + ++V E+ + I+L S Sbjct: 139 VRNVLPALGNYAISMFKETPFLAVITVQEMVFEARKYGADHFAYTEVFTLAGLIFLVASY 198 Query: 380 MIALFMNRLNAKIA 393 +L M +L ++ Sbjct: 199 PTSLLMRKLEKRLG 212 >gi|187923120|ref|YP_001894762.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia phytofirmans PsJN] gi|187714314|gb|ACD15538.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia phytofirmans PsJN] Length = 229 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 48/165 (29%), Positives = 84/165 (50%), Gaps = 17/165 (10%) Query: 192 FSFVLGIVLSLFATRLSRH-FHEKTGKALPLLYISTFLIFGLPTLVLIALKY---QLHFD 247 F+FVLG++ + A +LS++ F G + T L+ G+P LVL+ L + Q+ + Sbjct: 27 FAFVLGLLGA--AAKLSKNRFSYGVGT------VYTTLVRGVPDLVLMLLLFYSIQIWLN 78 Query: 248 KPVLGQFNFIGGSTVSPE-FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306 + +G + + F++ L A+ E R +AVPRGQ+EA A G+T Sbjct: 79 NLT----DLLGWDQIDIDPFVAGVAVLGFIYGAYFTETFRGAFLAVPRGQLEAGAAYGMT 134 Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 + V+ PQ MR +P + + + ++K ++L +G AD+V Sbjct: 135 GWQVFTRVMFPQMMRFALPGIGNNWQVMVKATALVSIIGLADVVK 179 >gi|70733846|ref|YP_257486.1| amino acid ABC transporter permease [Pseudomonas fluorescens Pf-5] gi|68348145|gb|AAY95751.1| amino acid ABC transporter, permease protein [Pseudomonas fluorescens Pf-5] Length = 230 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 48/193 (24%), Positives = 90/193 (46%), Gaps = 23/193 (11%) Query: 214 KTGKALPLLYIS---TFLIFGLPTLVLIALKY----------QLHFDKPVLGQFNFIGGS 260 KT PL ++ + ++ G+P L+ + L Y HF P L Sbjct: 41 KTSPYKPLRWLGETYSTIVRGVPELLWVLLIYYGTVNMMSALGEHFGNPDL--------- 91 Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320 +SP F++ IAL A+ E+ R ++A+P+G EA ALGL+ + ++LPQ Sbjct: 92 ALSP-FLAGVIALGLCFGAYATEVFRGAILAIPKGHREAGTALGLSKFRIFSRLILPQMW 150 Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380 R +P L + ++ L+K+++L +G +++ + ++ F+YL L+++ Sbjct: 151 RIALPGLGNLFMILMKDTALVSVIGLEEIMRHAQNAVTFAKHPFTFFMVAAFMYLGLTVL 210 Query: 381 IALFMNRLNAKIA 393 M+ L + A Sbjct: 211 AMTGMHFLEKRAA 223 >gi|296139760|ref|YP_003647003.1| polar amino acid ABC transporter inner membrane subunit [Tsukamurella paurometabola DSM 20162] gi|296027894|gb|ADG78664.1| polar amino acid ABC transporter, inner membrane subunit [Tsukamurella paurometabola DSM 20162] Length = 307 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 35/128 (27%), Positives = 72/128 (56%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 + + I + + AA+ +EIVR+G++ V GQ +AA ALG+ + LPQA+R+I+P Sbjct: 162 YTAAVIGIVLHQAAYGSEIVRAGILGVAPGQHDAARALGIPPVAHLLRITLPQALRTIVP 221 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 P ++ + LLK ++ + DL I + G+ I ++L+ + Y L+ ++++ Sbjct: 222 PAANEVIGLLKGTTAVFILALPDLFYQVQVIYGRNGRIIPLLLVAVAWYAILTTVLSIGQ 281 Query: 386 NRLNAKIA 393 + + +++ Sbjct: 282 HSVEKRLS 289 >gi|171316941|ref|ZP_02906148.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria MEX-5] gi|171097865|gb|EDT42685.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria MEX-5] Length = 229 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 50/189 (26%), Positives = 93/189 (49%), Gaps = 6/189 (3%) Query: 212 HEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQF-NFIGGSTVSPE-FMSL 269 H + +A+ Y T LI +P LVL+ L + + + L QF + +G + + F++ Sbjct: 42 HNRVLRAIATGY--TTLIRSVPDLVLMLLLF--YSIQIWLNQFTDLVGWEQIDIDPFVAG 97 Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329 + L A+ E R ++VPRGQ+EA A G++ + ++ PQ MR +P + + Sbjct: 98 VLTLGFIYGAYFTETFRGAFLSVPRGQLEAGAAYGMSGMRVFVRIMFPQMMRFALPGIGN 157 Query: 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 + L+K ++L +G AD+V T ILI IYL+++ + L + +L Sbjct: 158 NWQVLVKATALVSIIGLADVVKAAQDAGKSTFNMFFFILIAALIYLAITTVSNLVLIQLE 217 Query: 390 AKIALKEKK 398 + ++ + Sbjct: 218 KRYSMGVRH 226 >gi|50086541|ref|YP_048051.1| amino acid ABC transporter membrane protein [Acinetobacter sp. ADP1] gi|49532515|emb|CAG70229.1| putative amino acid transport protein (ABC superfamily, membrane) (gluP) [Acinetobacter sp. ADP1] Length = 222 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 37/112 (33%), Positives = 64/112 (57%) Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 A+ EIVR+G+ A P+GQ+EAA +L +T + R V+LP ++ I P L SQ + ++ Sbjct: 102 GAYSTEIVRAGIQATPKGQIEAAASLAMTRFQILRHVVLPPSLGRIWPALCSQIIIVMLG 161 Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 SS+ + +L V I ++ + EI ++ +YL L+I+I + R+ Sbjct: 162 SSVCSQISMEELTFVANFIQSRNFRGFEIYIVIAVLYLILAIVIRALLMRIG 213 >gi|238019790|ref|ZP_04600216.1| hypothetical protein VEIDISOL_01665 [Veillonella dispar ATCC 17748] gi|237863314|gb|EEP64604.1| hypothetical protein VEIDISOL_01665 [Veillonella dispar ATCC 17748] Length = 229 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 33/87 (37%), Positives = 54/87 (62%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P + +Y + + AA+ AEI+RS + AV G+ EAA +LG+T ++ ++LPQA Sbjct: 86 PGLVFVYAVFTLHIAAYSAEIMRSSIDAVAPGEKEAAKSLGMTEFQSYVRIILPQAFTMS 145 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLV 350 IPPLT+ + +LK ++L VG D++ Sbjct: 146 IPPLTNLVIGMLKGTALIFNVGVVDMM 172 >gi|306828837|ref|ZP_07462029.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus mitis ATCC 6249] gi|304429015|gb|EFM32103.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus mitis ATCC 6249] Length = 240 Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 51/169 (30%), Positives = 89/169 (52%), Gaps = 9/169 (5%) Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248 I + + VL + +LF L + + + ++ L+Y++ I P ++LI Y L Sbjct: 23 IMIVAMVLSFLPALFLA-LGQIYKVRGVRSFSLVYLA--FIRATPPILLILFFYSLF--P 77 Query: 249 PVLGQF-NFIGGSTVSPEFMSLYIALSCY---TAAFIAEIVRSGLIAVPRGQMEAAIALG 304 +L QF IG + LY A Y T ++EI+RS ++ V +GQ+EAA A+G Sbjct: 78 SLLNQFLKSIGSDLDIFKLDPLYYAFIIYSLMTVGSLSEILRSAILTVDKGQLEAAHAIG 137 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353 LT +A ++ PQA+RS +P L + +N++K +SL + D+ ++ Sbjct: 138 LTTTQAYLRIVFPQALRSALPNLANLVINIVKGTSLVFVMTIKDITAIA 186 >gi|294676182|ref|YP_003576797.1| amino acid ABC transporter permease [Rhodobacter capsulatus SB 1003] gi|294475002|gb|ADE84390.1| amino acid ABC transporter, permease protein [Rhodobacter capsulatus SB 1003] Length = 236 Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 44/133 (33%), Positives = 70/133 (52%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G+ P F + IAL+ AAF AE++R +VP GQ+ A +A+G+T R+ + LPQ Sbjct: 96 GAVDFPPFAAGVIALALVFAAFAAEVLRGAFQSVPEGQVLAGLAIGMTGRQVFWRIKLPQ 155 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378 R +P + + +LNLLK+++L + DL+ + T Q L IY +L Sbjct: 156 LWRFALPGMGNLWLNLLKDTALVSVIALDDLMRATKVAVGVTKQPFTFYLAACLIYWALC 215 Query: 379 IMIALFMNRLNAK 391 + L + RL A+ Sbjct: 216 LGSELVLARLEAR 228 >gi|172063792|ref|YP_001811443.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria MC40-6] gi|171996309|gb|ACB67227.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria MC40-6] Length = 219 Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 56/207 (27%), Positives = 103/207 (49%), Gaps = 14/207 (6%) Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247 K V S LG+V+ L + R + L Y+S L+ G P LV + + +++ Sbjct: 23 KFAVASMALGLVVGLVVA-IMRIGSNRLASGLAQGYVS--LMRGTPLLVQM---FVVYYG 76 Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307 P LG T+ P ++ L+ A+++E +R ++ + RGQ AA +LGLTH Sbjct: 77 LPDLG-------ITLDPTTAGIF-TLTLNAGAYLSESMRGAILGIGRGQWAAAHSLGLTH 128 Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367 + R ++ PQA+R +P L + ++L+K++SL + +L+ +I T Q + + Sbjct: 129 VQTLRYIVCPQALRLAVPSLGNTLISLIKDTSLVSVITVTELLRSTQEVIAATFQPLPLY 188 Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIAL 394 L +Y LS ++ R+ +++L Sbjct: 189 LAAAALYWVLSTLLTRLQGRVETRLSL 215 >gi|257866711|ref|ZP_05646364.1| amino acid ABC transporter [Enterococcus casseliflavus EC30] gi|257872772|ref|ZP_05652425.1| amino acid ABC transporter [Enterococcus casseliflavus EC10] gi|257800669|gb|EEV29697.1| amino acid ABC transporter [Enterococcus casseliflavus EC30] gi|257806936|gb|EEV35758.1| amino acid ABC transporter [Enterococcus casseliflavus EC10] Length = 214 Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 43/176 (24%), Positives = 89/176 (50%), Gaps = 25/176 (14%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 + PLL F+ +GLP L ++ FD+ F + IA Sbjct: 60 RGTPLLLQLIFVFYGLPILGIV-------FDR-----------------FEAALIAFIIN 95 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 AA+ EI R G+ ++P GQ EAA L L+ + + +++PQ ++ +P + ++ +NL+K Sbjct: 96 YAAYFTEIFRGGIQSIPAGQYEAAKVLRLSPIQTIQKIIIPQVVKITLPSVGNEVINLVK 155 Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 ++SL +G +D++ +G + + + ++ + + IYL ++ + L + ++ K+ Sbjct: 156 DTSLVYILGLSDVMRIGKIAMERDSTLLPLVGVGL-IYLVMTGVFTLLLKQIETKL 210 >gi|255283434|ref|ZP_05347989.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Bryantella formatexigens DSM 14469] gi|255266082|gb|EET59287.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Bryantella formatexigens DSM 14469] Length = 267 Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 43/149 (28%), Positives = 79/149 (53%), Gaps = 6/149 (4%) Query: 236 VLIALKYQLHFDKPVLGQFNFI--GGSTVSPEFMSLYIA----LSCYTAAFIAEIVRSGL 289 V+++ +L P++ Q FI G ++ MS++ A +S T A++AE VR G+ Sbjct: 74 VILSAYVELFRGTPMMVQAMFIYYGSQSLFKINMSMWFAAYFIVSINTGAYMAETVRGGI 133 Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349 +++ GQ E A A+G+TH + V+LPQA+R+I+P + + + +K++ + +G +L Sbjct: 134 LSIDPGQTEGAKAIGMTHFQTMTSVILPQALRNIMPQIGNNLIINIKDTCVLSIIGTVEL 193 Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLS 378 ++ E I M IY L+ Sbjct: 194 FFAAKSVAGTFYTYFEAFTIAMVIYFVLT 222 >gi|332040173|gb|EGI76554.1| polar amino acid abc transporter, inner membrane subunit [Hylemonella gracilis ATCC 19624] Length = 266 Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 38/123 (30%), Positives = 70/123 (56%), Gaps = 2/123 (1%) Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326 ++L + LS AA +AE+ R+G++AVPRGQ +AA +LGLT + V+ QA+R I+P Sbjct: 142 LTLPVGLSA--AAVVAEVYRAGVLAVPRGQTDAARSLGLTDTQVFFHVVFLQALRYIVPA 199 Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386 L +Q + ++K+++ V + +L+ +I + + L+ +Y ++ I+ Sbjct: 200 LVAQLVIVVKDTTFGYIVTYGELLQNAKVLIANYHSLVPVYLVVALLYCLVNYAISWASQ 259 Query: 387 RLN 389 RL Sbjct: 260 RLG 262 >gi|296102999|ref|YP_003613145.1| allantoate transport membrane protein [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295057458|gb|ADF62196.1| allantoate transport membrane protein [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 221 Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 39/108 (36%), Positives = 60/108 (55%) Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 A+ EIVR+G+ P+GQ EA LGLT + V+LP A++ I P L SQ + ++ Sbjct: 102 GAYSTEIVRAGIQVTPKGQWEAGRVLGLTRTQTFIRVVLPPALQRIYPALVSQCIIVMLG 161 Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 SS+ V + +L I ++T + E+ L+ IYL+LSI + M Sbjct: 162 SSVVSQVSYEELTFAANLIQSRTFLSFEVYLVTTGIYLALSITLRQLM 209 >gi|260222555|emb|CBA32233.1| hypothetical protein Csp_D31110 [Curvibacter putative symbiont of Hydra magnipapillata] Length = 227 Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 47/161 (29%), Positives = 80/161 (49%), Gaps = 7/161 (4%) Query: 243 QLHFDKPVLGQFNFI------GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296 +L + P + Q FI G +S E S +IA+ A+ EI+R+GL A P+GQ Sbjct: 68 ELIRNTPFIVQLFFIFFGLPAAGFKLSAETAS-FIAMVINLGAYATEIIRAGLEATPKGQ 126 Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356 +EAA++L L + V+LP A++ I P L SQ + ++ SS+ + +L I Sbjct: 127 IEAAVSLALNRLQTFTYVVLPPALKKIWPSLISQVVIVMLGSSVCGQISTKELSYAADLI 186 Query: 357 INQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 + ++ E ++ +YL LS ++ +N L A + Sbjct: 187 QSNNFRSFEAFMVVGAVYLLLSFVVRHVLNWLGATFVFGRR 227 >gi|239931078|ref|ZP_04688031.1| amino acid ABC transporter transmembrane protein [Streptomyces ghanaensis ATCC 14672] gi|291439448|ref|ZP_06578838.1| amino acid ABC transporter integral membrane protein [Streptomyces ghanaensis ATCC 14672] gi|291342343|gb|EFE69299.1| amino acid ABC transporter integral membrane protein [Streptomyces ghanaensis ATCC 14672] Length = 216 Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 52/206 (25%), Positives = 95/206 (46%), Gaps = 30/206 (14%) Query: 193 SFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPTLVLIALKYQLHF 246 SFVLG+V +L +R G + PLL FL + LP ++ + F Sbjct: 33 SFVLGLVWALLMRVPTRWVTWPVGAVTEFVRNTPLLVQLFFLFYVLP-------EWGITF 85 Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306 G F A+ + + + ++ R+G+ AVP GQ EAA AL L Sbjct: 86 SALTTGVF-----------------AIGLHYSTYTMQVYRAGIEAVPVGQWEAATALNLP 128 Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 R+ +V+LPQA+R ++P L + +++LK++ L +A+ +++ Q Q E Sbjct: 129 PRRTWTVVILPQAVRRVVPALGNYVISMLKDTPLLMAITVLEMLGEARLFSQQNFQFTEP 188 Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKI 392 + + ++ +S + +L + L ++ Sbjct: 189 LTVIGVAFIVISYLASLALRALERRL 214 >gi|306831849|ref|ZP_07465005.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|304426047|gb|EFM29163.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus gallolyticus subsp. gallolyticus TX20005] Length = 215 Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 28/73 (38%), Positives = 49/73 (67%) Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 A + +T+A +AEI+R GL V GQ EA +A G+T+ + ++ PQA R ++P + SQ+ Sbjct: 86 AFTVFTSAALAEIIRGGLNGVDDGQTEAGLAQGMTNFQIFIYIIFPQAFRKMLPAIISQF 145 Query: 332 LNLLKNSSLAVAV 344 + ++K++SL +V Sbjct: 146 VTVIKDTSLLYSV 158 Score = 43.9 bits (102), Expect = 0.045, Method: Compositional matrix adjust. Identities = 21/61 (34%), Positives = 37/61 (60%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 IL G T +++F ++ +T+IGT++ R N + WI +Y+E RN+P L+ IF + Sbjct: 12 ILQGLWLTIYISFISIVLSTLIGTVLAVMRNGKNPIFRWISSIYIEFVRNVPNLLWIFII 71 Query: 149 Y 149 + Sbjct: 72 F 72 >gi|326204707|ref|ZP_08194562.1| polar amino acid ABC transporter, inner membrane subunit [Clostridium papyrosolvens DSM 2782] gi|325985078|gb|EGD45919.1| polar amino acid ABC transporter, inner membrane subunit [Clostridium papyrosolvens DSM 2782] Length = 210 Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 28/89 (31%), Positives = 53/89 (59%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 F + IA AA+ AEI R G+ ++P+GQ EA LG T + ++LPQ ++ ++ Sbjct: 80 RFTAAVIAFVLNYAAYFAEIFRGGIESIPKGQYEAGEVLGFTKLQVFFKIVLPQVIKRVL 139 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVG 353 PP++++ + L+K+++L A+ ++ V Sbjct: 140 PPISNEVITLVKDTALVSAIAVEEMFRVA 168 >gi|242240517|ref|YP_002988698.1| polar amino acid ABC transporter inner membrane subunit [Dickeya dadantii Ech703] gi|242132574|gb|ACS86876.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya dadantii Ech703] Length = 245 Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 39/121 (32%), Positives = 65/121 (53%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + +AL A+++E R+G+ +VP+GQ+EAA LG+ R+ V+LPQA R++ P Sbjct: 88 FTAGVLALGINVGAYLSETFRAGIQSVPKGQLEAAWILGMPRRQMFLHVVLPQAARAVWP 147 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 + + + LL +SL A+ +L I +T I+ + IYL LS + + Sbjct: 148 AIINNLIQLLLGTSLLSAIALPELTGTATVINARTLLYIQTFSVVALIYLLLSNLFSWLG 207 Query: 386 N 386 N Sbjct: 208 N 208 >gi|218678152|ref|ZP_03526049.1| nopaline ABC transporter, permease protein [Rhizobium etli CIAT 894] Length = 163 Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 39/102 (38%), Positives = 58/102 (56%), Gaps = 2/102 (1%) Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285 T+ G P LV + L Y P++ Q +F+ P F +IA + +AA E++ Sbjct: 57 TYAFRGTPLLVQLFLIYYGIGQLPLVRQ-SFLWAVMREP-FWCAFIAFTLNSAAHTTEVL 114 Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327 R G+ AVPRGQ+EAA ALGL+ RL++ P +RS+ PP+ Sbjct: 115 RGGIQAVPRGQIEAAKALGLSRFHTARLIVFPLTLRSLFPPM 156 >gi|170703222|ref|ZP_02894026.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria IOP40-10] gi|172060112|ref|YP_001807764.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia ambifaria MC40-6] gi|170131872|gb|EDT00396.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria IOP40-10] gi|171992629|gb|ACB63548.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria MC40-6] Length = 229 Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 61/234 (26%), Positives = 110/234 (47%), Gaps = 12/234 (5%) Query: 169 MFLNNRGLSFPTLTMDT--NAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226 MFL G P L T ++ V S + L L +++ H + +A+ Y T Sbjct: 1 MFLYGFG---PVLWAGTVQTIELSVLSLAAAVALGLIGA-VAKLSHNRVLRAIATGY--T 54 Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQF-NFIGGSTVSPE-FMSLYIALSCYTAAFIAEI 284 LI +P LVL+ L + + + L QF + +G + + F++ + L A+ E Sbjct: 55 TLIRSVPDLVLMLLLF--YSIQIWLNQFTDLVGWEQIDIDPFVAGVLTLGFIYGAYFTET 112 Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344 R ++VPRGQ+EA A G++ + ++ PQ MR +P + + + L+K ++L + Sbjct: 113 FRGAFLSVPRGQLEAGAAYGMSGMRVFVRIMFPQMMRFALPGIGNNWQVLVKATALVSII 172 Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 G AD+V T ILI IYL+++ + L + +L + ++ + Sbjct: 173 GLADVVKAAQDAGKSTFNMFFFILIAALIYLAITTVSNLVLIQLEKRYSMGVRH 226 >gi|163740071|ref|ZP_02147475.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Phaeobacter gallaeciensis BS107] gi|161386702|gb|EDQ11067.1| Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine [Phaeobacter gallaeciensis BS107] Length = 224 Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 54/177 (30%), Positives = 89/177 (50%), Gaps = 16/177 (9%) Query: 219 LPLLYISTFLIFGLPTLV-LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT 277 L +L+IS F G P LV L Y L VL Q N + + + L+ + Sbjct: 55 LVVLFISFFR--GTPLLVQLFLFYYGLPQVLSVLTQINGVSAAI---------MGLTLHF 103 Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 AA++AE +R+ ++ V R Q EAA ++G+T + R ++LPQA R P L + +++++K Sbjct: 104 AAYMAESIRAAILGVDRSQWEAAQSIGMTRGQMMRRIVLPQAARIAAPTLVNYFIDMIKG 163 Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAI--EIILIWMFIYLSLSIMIALFMNRLNAKI 392 +SLA +G ++ +G T G + E L+ IY L ++L RL + Sbjct: 164 TSLAFTLGVTEM--MGATQKEAAGSFLYFEAFLVVAVIYWILVEALSLVQRRLETHL 218 >gi|168817911|ref|ZP_02829911.1| histidine ABC transporter, permease protein HisQ [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205344900|gb|EDZ31664.1| histidine ABC transporter, permease protein HisQ [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|320086788|emb|CBY96560.1| Nopaline transport system permease protein nocQ [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] Length = 228 Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 42/127 (33%), Positives = 63/127 (49%), Gaps = 2/127 (1%) Query: 226 TFLIFGLPTLVLIALK-YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284 T LI G+P LVL+ L Y L V+ I + P + I L A+ E Sbjct: 53 TTLIRGVPDLVLMLLIFYGLQIALNVVTDSLGIDQIDIDPMVAGI-ITLGFIYGAYFTET 111 Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344 R +AVP+G +EAA A G THR+ R ++ P MR +P + + + +LK ++L + Sbjct: 112 FRGAFMAVPKGHIEAATAFGFTHRQTFRRIMFPAMMRYALPGIGNNWQVILKATALVSLL 171 Query: 345 GFADLVS 351 G D+V Sbjct: 172 GLEDVVK 178 >gi|329296934|ref|ZP_08254270.1| polar amino acid ABC transporter inner membrane subunit [Plautia stali symbiont] Length = 218 Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 36/108 (33%), Positives = 61/108 (56%), Gaps = 1/108 (0%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G V+P + + +AL+ YT+AF+ +I + A+P+GQ EA+ LGL + V+ PQ Sbjct: 80 GIDVAP-WTAASLALTLYTSAFLLDIWYGSIRALPKGQWEASRCLGLNFGQTLYRVVAPQ 138 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 A+R I P + ++K ++LA +GF +L G + N T Q ++ Sbjct: 139 AIRIAIAPTVGFAVQVIKGTALASIIGFVELTKAGTILNNVTYQPFKV 186 >gi|291616415|ref|YP_003519157.1| YhdY [Pantoea ananatis LMG 20103] gi|291151445|gb|ADD76029.1| YhdY [Pantoea ananatis LMG 20103] gi|327392855|dbj|BAK10277.1| amino acid ABC transporter permease protein YhdY [Pantoea ananatis AJ13355] Length = 225 Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 36/108 (33%), Positives = 61/108 (56%), Gaps = 1/108 (0%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G V+P + + +AL+ YT+AF+ +I + A+P+GQ EA+ LGL + V+ PQ Sbjct: 87 GIDVAP-WTAASLALTFYTSAFLLDIWHGSIQALPKGQWEASRCLGLDFGQTLTRVIAPQ 145 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 A+R I P + ++K ++LA +GF +L G + N T Q ++ Sbjct: 146 AIRIAIAPTVGFAVQVIKGTALASIIGFVELTKAGTILNNVTYQPFKV 193 >gi|229589728|ref|YP_002871847.1| putative ABC transporter membrane protein [Pseudomonas fluorescens SBW25] gi|229361594|emb|CAY48471.1| putative ABC transport system, membrane protein [Pseudomonas fluorescens SBW25] Length = 261 Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 38/141 (26%), Positives = 73/141 (51%), Gaps = 4/141 (2%) Query: 257 IGGSTVS-PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315 +G + +S P+++ + I L+ +A +AEI R + ++P Q EAA +L T + R ++ Sbjct: 119 VGSAYISFPDWVKVTIGLALPASANVAEIFRGAIASIPSTQWEAARSLAFTRGQIFRSII 178 Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS---VGGTIINQTGQAIEIILIWMF 372 LPQ + ++PP + Y + ++LA VG D++ + +N TG + I L + Sbjct: 179 LPQCFKRMLPPWMNLYAVITMGTALASLVGVHDVIDTAQIASNTVNMTGFTVVIYLSLLV 238 Query: 373 IYLSLSIMIALFMNRLNAKIA 393 ++ + I+ RL + A Sbjct: 239 LFFAYCYPISRLTQRLERRYA 259 >gi|224368514|ref|YP_002602677.1| GlnP2 [Desulfobacterium autotrophicum HRM2] gi|223691230|gb|ACN14513.1| GlnP2 [Desulfobacterium autotrophicum HRM2] Length = 223 Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 32/81 (39%), Positives = 52/81 (64%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +AL T+ + AE R + ++ GQM AA A+GL KA R ++LPQA+R +IP +++ Sbjct: 93 LALGINTSVYQAEYFRGAIKSIKPGQMTAARAMGLGKWKAIRYIILPQALRLVIPSSSNE 152 Query: 331 YLNLLKNSSLAVAVGFADLVS 351 + + K +S+A AVG +L+S Sbjct: 153 IIYMFKYTSVAFAVGVPELLS 173 Score = 42.0 bits (97), Expect = 0.19, Method: Compositional matrix adjust. Identities = 23/70 (32%), Positives = 37/70 (52%), Gaps = 4/70 (5%) Query: 84 SYATAILVGFVNTFW----LAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNI 139 +YA IL ++ W L+F + I G ++G R+ ++K + WI YVE R Sbjct: 6 NYAIEILPDMLSGAWVTIELSFVCITVGIIFGLILGVARVYSSKFIYWIVTAYVEFLRGT 65 Query: 140 PPLVVIFFLY 149 P L+ +FF+Y Sbjct: 66 PCLLQLFFIY 75 >gi|70729651|ref|YP_259390.1| amino acid ABC transporter permease [Pseudomonas fluorescens Pf-5] gi|68343950|gb|AAY91556.1| amino acid ABC transporter, permease protein [Pseudomonas fluorescens Pf-5] Length = 218 Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 68/236 (28%), Positives = 116/236 (49%), Gaps = 26/236 (11%) Query: 169 MFLNNRGLSFPTL------TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222 MFL N P L T+ FV S ++G+V +L R ++ L Sbjct: 1 MFLQNALDFLPILLKGAVVTLQVTVGSFVLSSLIGLVFALMMVSKVR--------SVALF 52 Query: 223 YISTF-LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281 I +I GLP +V + + ++F P G I + + + L IA S Y A Sbjct: 53 AIGVVNVIRGLPIIVQL---FYIYFVLPDFG----IQLTAMQAGVIGLGIAYSAYQA--- 102 Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341 E R+G+ A+ +GQ+EAA ++G+ R V+LPQA+R +PP + + +LK+SSL Sbjct: 103 -ENFRAGIQAIHQGQIEAAESIGMRGPMIMRRVVLPQALRIALPPYGNTLVMMLKDSSLV 161 Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 + A++ G I + T + + + + +YL+LS+ ++ + RL A+I+ + K Sbjct: 162 STITVAEMTRAGQLIASSTFENMTVYTLVALLYLALSLPLSFALRRLEARISTRRK 217 >gi|170735092|ref|YP_001774206.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia cenocepacia MC0-3] gi|169821130|gb|ACA95711.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia cenocepacia MC0-3] Length = 240 Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 53/197 (26%), Positives = 97/197 (49%), Gaps = 12/197 (6%) Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL----GQFNFIGGST 261 +LSR+ +T + L LY + F G+P L++I Y +F L GQ+ G Sbjct: 47 KLSRY---RTLRLLGDLYTTVFR--GVPELLVI---YLFYFGGSTLVTAVGQWFGAEGFI 98 Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321 P F+ +A+ + A+ AE+ R+ ++AV +G++EAA ++G+ R +L+PQ +R Sbjct: 99 GVPPFVVGALAVGMISGAYQAEVYRAAVLAVSKGELEAARSIGMPRSMVLRRILVPQVLR 158 Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 +P + + + LK+S+L G A+L+ N T Q + +YL ++ + Sbjct: 159 FALPGIGNVWQLSLKDSALISVTGLAELLRTSQIAANSTHQYFVFFVAGGALYLLMTGLS 218 Query: 382 ALFMNRLNAKIALKEKK 398 NR A + ++ Sbjct: 219 NRVFNRAEAIVGRSFRR 235 >gi|271968859|ref|YP_003343055.1| amino acid ABC transporter permease [Streptosporangium roseum DSM 43021] gi|270512034|gb|ACZ90312.1| ABC-type amino acid transport system permease component-like protein [Streptosporangium roseum DSM 43021] Length = 367 Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 44/140 (31%), Positives = 77/140 (55%), Gaps = 19/140 (13%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHF-----DKPVLGQFNFIGGSTVSPEFMSLYI 271 +AL + YI F G+P++VLI Y + F + P+L + + I + + Sbjct: 195 RALCIAYIDVFR--GIPSVVLI---YLVCFGLPLTEVPILSEGDPI---------LYAVV 240 Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 ALS +A+ AE+ R+G+ ++ + Q AA+++GL+ R V+LPQ R+I P+ S + Sbjct: 241 ALSLTYSAYNAELYRAGIESINKSQTSAALSMGLSQPDVLRFVILPQMSRNIAAPMLSTF 300 Query: 332 LNLLKNSSLAVAVGFADLVS 351 + L K+++L + VG D S Sbjct: 301 IGLQKDTALVIVVGIIDAFS 320 >gi|218677478|ref|ZP_03525375.1| putative amino acid ABC transporter, permease protein [Rhizobium etli CIAT 894] Length = 188 Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 42/142 (29%), Positives = 72/142 (50%), Gaps = 12/142 (8%) Query: 28 SVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQG------------ 75 ++Q+ + L+ V+ V + + + FL+ AGF+I +G Sbjct: 31 AIQLGIVALVVVLLGMLAYAVKAGLAEKGIRFSFSFLANTAGFDISEGWTLTSGEGFVPN 90 Query: 76 IVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEV 135 + ++S+ S A+A + G NT +A +I +TI+GT++G GRLS N +V +C VE Sbjct: 91 LTQFSSEMSIASAFVTGIFNTAKIALLAIILSTILGTMLGVGRLSTNWVVRNLCFWIVEF 150 Query: 136 FRNIPPLVVIFFLYKSVLSVLP 157 RN P L+ + F Y +V+ P Sbjct: 151 VRNTPLLIQLVFWYFAVVLHFP 172 >gi|115358998|ref|YP_776136.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria AMMD] gi|115284286|gb|ABI89802.1| amino acid ABC transporter membrane protein, PAAT family [Burkholderia ambifaria AMMD] Length = 219 Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 56/207 (27%), Positives = 103/207 (49%), Gaps = 14/207 (6%) Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247 K V S LG+V+ L + R + L Y+S L+ G P LV + + +++ Sbjct: 23 KFAVASMALGLVVGLVVA-IMRIGSNRLASGLAQGYVS--LMRGTPLLVQM---FVVYYG 76 Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307 P LG T+ P ++ L+ A+++E +R ++ + RGQ AA +LGLTH Sbjct: 77 LPDLG-------ITLDPTTAGIF-TLTLNAGAYLSESMRGAILGIGRGQWAAAHSLGLTH 128 Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367 + R ++ PQA+R +P L + ++L+K++SL + +L+ +I T Q + + Sbjct: 129 VQTLRYIVCPQALRLAVPSLGNTLISLIKDTSLVSVITVTELLRSTQEVIAATFQPLPLY 188 Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIAL 394 L +Y LS ++ R+ +++L Sbjct: 189 LAAAALYWVLSTLLTRLQGRVETRLSL 215 >gi|89214059|gb|ABD64371.1| amino acid ABC transporter permease protein 1 [Pseudomonas chlororaphis] Length = 222 Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 37/122 (30%), Positives = 69/122 (56%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 E+ + +A+ A+ EI+R+G+ A+PRGQ+EAA AL +T +A R V+L A+ + Sbjct: 89 EWQAAVLAMVINLGAYSTEIIRAGIQAIPRGQLEAAAALAMTRLEAFRHVVLLPALGKVW 148 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 P L+SQ + ++ S++ + +L I ++ +A E + IYL ++++I Sbjct: 149 PALSSQIIIVMLGSAVCSQIATEELSFAANFIQSRNFRAFETYALTTLIYLCMALLIRQL 208 Query: 385 MN 386 +N Sbjct: 209 LN 210 >gi|72160708|ref|YP_288365.1| amino acid ABC transporter inner membrane subunit [Thermobifida fusca YX] gi|71914440|gb|AAZ54342.1| amino acid ABC transporter, inner membrane subunit [Thermobifida fusca YX] Length = 240 Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 48/174 (27%), Positives = 82/174 (47%), Gaps = 17/174 (9%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250 V +F L +V+ + T +A+ Y TF G+ LVL+ Y + F P Sbjct: 27 VLAFALAMVVGVMGT-----LRNPVARAIATGYTETF--RGVAALVLM---YWMAFAIPQ 76 Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310 L + + +AL A+ AE+VR+ + AVP+ Q+EA IAL ++ + Sbjct: 77 LVPYKI-------DALFAAVLALGLNVGAYGAEVVRAAINAVPKAQVEATIALSMSWWRR 129 Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364 R V+LPQA ++P + + L+K +++ +G +DL V TG+ + Sbjct: 130 MRAVVLPQAWAQMLPTFGNLVIELMKATAIVSLIGVSDLTRVAQEQRASTGETV 183 >gi|323526380|ref|YP_004228533.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia sp. CCGE1001] gi|323383382|gb|ADX55473.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. CCGE1001] Length = 229 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 33/121 (27%), Positives = 62/121 (51%) Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 A+ AE R +AVPRGQ+EA A G+ + R +L PQ MR +P + + + L+K Sbjct: 106 GAYFAETFRGAFLAVPRGQLEAGAAYGMNGARIFRRILFPQMMRFALPGIGNNWQVLIKA 165 Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 ++L +G AD+V T + ++ IYL+++ + + ++ L + + + Sbjct: 166 TALVSIIGLADVVKAAQDAGRSTFKMFLFVMCAALIYLAMTTVSNIVLSGLEKRFSTGTR 225 Query: 398 K 398 + Sbjct: 226 Q 226 >gi|307727657|ref|YP_003910870.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia sp. CCGE1003] gi|307588182|gb|ADN61579.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. CCGE1003] Length = 240 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 48/179 (26%), Positives = 87/179 (48%), Gaps = 7/179 (3%) Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVL----GQFNFIGGSTVSPEFMSLYIALSCYTAA 279 I T + G+P L++I Y +F L GQ+ G P F+ +A+ + A Sbjct: 60 IYTTVFRGVPELLVI---YLFYFGGSTLVTTVGQWFGAEGFVGVPPFVIGALAVGMISGA 116 Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339 + AE+ RS ++AV RG++EAA ++G+ R +L+PQ +R +P + + + LK+S+ Sbjct: 117 YQAEVYRSAVLAVSRGELEAARSIGMPTLTMARRILIPQVLRFALPGIGNVWQLSLKDSA 176 Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 L G A+L+ T Q ++ +YL ++ + N A++ K+ Sbjct: 177 LISVTGLAELLRTSQVAAGSTHQYFTFFVVGGALYLLMTSISNRVFNHAEARVGRSFKR 235 >gi|157370638|ref|YP_001478627.1| polar amino acid ABC transporter inner membrane subunit [Serratia proteamaculans 568] gi|157322402|gb|ABV41499.1| polar amino acid ABC transporter, inner membrane subunit [Serratia proteamaculans 568] Length = 230 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 41/137 (29%), Positives = 71/137 (51%), Gaps = 8/137 (5%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F+S +A+ A+ E R + V RGQ+EAA+A G+ + R VLLPQ + IP Sbjct: 93 FISGVLAIGFVFGAYYTETFRGAFLTVERGQLEAAMAYGMRPGQVFRRVLLPQMLSFAIP 152 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF----IYLSLSIMI 381 + + +L L+K S+L +G D+V + Q G+A + ++ F IY++++ + Sbjct: 153 GINNNWLGLMKASALVSILGLEDMV----WLAEQAGRATQKPFLFYFLVALIYMAITAVS 208 Query: 382 ALFMNRLNAKIALKEKK 398 + +RL + AL Sbjct: 209 SWGFSRLARRYALASSH 225 >gi|115351108|ref|YP_772947.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia ambifaria AMMD] gi|115281096|gb|ABI86613.1| amino acid ABC transporter membrane protein 1, PAAT family [Burkholderia ambifaria AMMD] Length = 253 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 54/209 (25%), Positives = 102/209 (48%), Gaps = 7/209 (3%) Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247 ++ V S + L L +++ H + +A+ Y T LI +P LVL+ L + + Sbjct: 43 ELSVLSLAAAVALGLIGA-VAKLSHNRVLRAIATGY--TTLIRSVPDLVLMLLLF--YSI 97 Query: 248 KPVLGQF-NFIGGSTVSPE-FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305 + L QF + +G + + F++ + L A+ E R ++VPRGQ+EA A G+ Sbjct: 98 QIWLNQFTDLVGWEQIDIDPFVAGVLTLGFIYGAYFTETFRGAFLSVPRGQLEAGAAYGM 157 Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365 + + ++ PQ MR +P + + + L+K ++L +G AD+V T Sbjct: 158 SGMRVFVRIMFPQMMRFALPGIGNNWQVLVKATALVSIIGLADVVKAAQDAGKSTFNMFF 217 Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIAL 394 ILI IYL+++ + L + +L + ++ Sbjct: 218 FILIAALIYLAITTVSNLVLIQLEKRYSM 246 >gi|221198892|ref|ZP_03571937.1| histidine transport system permease protein HisQ [Burkholderia multivorans CGD2M] gi|221205152|ref|ZP_03578168.1| histidine transport system permease protein HisQ [Burkholderia multivorans CGD2] gi|221174943|gb|EEE07374.1| histidine transport system permease protein HisQ [Burkholderia multivorans CGD2] gi|221181343|gb|EEE13745.1| histidine transport system permease protein HisQ [Burkholderia multivorans CGD2M] Length = 240 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 52/197 (26%), Positives = 97/197 (49%), Gaps = 12/197 (6%) Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL----GQFNFIGGST 261 +LSR+ ++ + L LY + F G+P L++I Y +F L GQ+ G Sbjct: 47 KLSRY---RSARLLGDLYTTVFR--GVPELLVI---YLFYFGGSTLVTAVGQWFGAEGFI 98 Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321 P F+ +A+ + A+ AE+ R+ ++AV +G++EAA ++G+ R +L+PQ +R Sbjct: 99 GVPPFVIGALAVGMISGAYQAEVYRAAVLAVSKGELEAARSIGMPRSMVLRRILVPQVLR 158 Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 +P + + + LK+S+L G A+L+ N T Q + +YL ++ + Sbjct: 159 FALPGIGNVWQLSLKDSALISVTGLAELLRTSQIAANSTHQYFVFFVAGGALYLLMTGLS 218 Query: 382 ALFMNRLNAKIALKEKK 398 NR A + ++ Sbjct: 219 NRVFNRAEAIVGRSFRR 235 >gi|119945247|ref|YP_942927.1| ABC polar amino acid transporter inner membrane protein [Psychromonas ingrahamii 37] gi|119863851|gb|ABM03328.1| ABC polar amino acid transporter inner membrane protein [Psychromonas ingrahamii 37] Length = 223 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 61/209 (29%), Positives = 102/209 (48%), Gaps = 16/209 (7%) Query: 177 SFPTLTMD--TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234 +FP L T + V S +LGIV+++ L + K + ++I T LP Sbjct: 14 AFPQLLSGAFTTIHVSVLSMLLGIVIAVLLA-LGKMSDSKVFYNMANIWIET--ARNLPA 70 Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294 L LI Y +F LG + G +SP F S++ AL A ++AE R G ++P Sbjct: 71 LFLI---YMAYFG---LGAY----GIHLSPYF-SVFSALVFINAGYLAETFRGGFQSIPT 119 Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354 Q AA +LG+ K R V+LPQ R I P+T+Q++ + SSL + VG +L Sbjct: 120 TQYSAAKSLGMNSLKVYRHVILPQMFRRIYHPMTNQFVWSILMSSLGILVGMNELSGETQ 179 Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIAL 383 + + + + +E ++ +Y ++ ++ L Sbjct: 180 RLQSTSFRTLEFFIVAAAMYFVITKLVLL 208 >gi|325524870|gb|EGD02817.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. TJI49] Length = 229 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 49/189 (25%), Positives = 93/189 (49%), Gaps = 6/189 (3%) Query: 212 HEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQF-NFIGGSTVSPE-FMSL 269 H + +A+ Y T LI +P LVL+ L + + + L QF + +G + + F++ Sbjct: 42 HNRVLRAIATGY--TTLIRSVPDLVLMLLLF--YSIQIWLNQFTDLVGWDQIDIDPFVAG 97 Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329 + L A+ E R ++VPRGQ+EA A G++ + ++ PQ MR +P + + Sbjct: 98 VLTLGFIYGAYFTETFRGAFLSVPRGQLEAGAAYGMSGMRVFVRIMFPQMMRFALPGIGN 157 Query: 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 + L+K ++L +G AD+V T IL+ IYL+++ + L + +L Sbjct: 158 NWQVLVKATALVSIIGLADVVKAAQDAGKSTFNMFFFILVAALIYLAITTVSNLVLIQLE 217 Query: 390 AKIALKEKK 398 + ++ + Sbjct: 218 KRYSMGVRH 226 >gi|258646475|ref|ZP_05733944.1| amino acid ABC transporter, permease protein [Dialister invisus DSM 15470] gi|260403883|gb|EEW97430.1| amino acid ABC transporter, permease protein [Dialister invisus DSM 15470] Length = 232 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 35/93 (37%), Positives = 56/93 (60%), Gaps = 1/93 (1%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 ++L+ + A I+EI+R ++V RGQ EAAI GL+ + ++ PQA+ IP L S+ Sbjct: 101 VSLTFHYAPVISEILRPAYLSVDRGQHEAAIVFGLSPVRRVFSIIAPQALPIAIPGLVSE 160 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQT-GQ 362 +N+LK++S+ +G DL+ IIN GQ Sbjct: 161 SINILKDTSIMFFIGVIDLMGRANLIINAAFGQ 193 >gi|227549083|ref|ZP_03979132.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Corynebacterium lipophiloflavum DSM 44291] gi|227078865|gb|EEI16828.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Corynebacterium lipophiloflavum DSM 44291] Length = 228 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 39/122 (31%), Positives = 72/122 (59%), Gaps = 1/122 (0%) Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335 YT+ F+AE +RSG+ V GQ EAA +LGL + L++LPQA+R+ I PL + + L Sbjct: 107 YTSCFVAESLRSGINTVHVGQSEAARSLGLGFGQIFSLIILPQALRAAIIPLGNTLIALT 166 Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL-IWMFIYLSLSIMIALFMNRLNAKIAL 394 KN+++A +G A+ + + I + +I ++ ++ L++ + L + L+ ++A+ Sbjct: 167 KNTTIASVIGVAEASLLMKSTIEMHANELFVIFGVFALGFIILTLPMGLALGWLSERLAV 226 Query: 395 KE 396 K Sbjct: 227 KR 228 >gi|222081929|ref|YP_002541294.1| amino acid ABC transporter [Agrobacterium radiobacter K84] gi|221726608|gb|ACM29697.1| amino acid ABC transporter [Agrobacterium radiobacter K84] Length = 227 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 36/119 (30%), Positives = 68/119 (57%) Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339 + EIVR+GL ++ + Q+EAA LGL+ R+ V++ A+ + P LTSQY+ L+ SS Sbjct: 104 YTCEIVRAGLQSIHKAQLEAAECLGLSRRQTYWHVIIRPAIERVYPALTSQYVLLMLASS 163 Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 + + +L +V I + T ++ E ++ +YL LS ++ + + L + ++ +K Sbjct: 164 ITSQISAEELTAVANRIQSDTFRSFETYIVVGVLYLLLSFVVRIALWLLGLGLFVRRRK 222 >gi|150375848|ref|YP_001312444.1| ectoine/hydroxyectoine ABC transporter permease EhuC [Sinorhizobium medicae WSM419] gi|150030395|gb|ABR62511.1| Ectoine/hydroxyectoine ABC transporter permease protein EhuC [Sinorhizobium medicae WSM419] Length = 239 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 38/135 (28%), Positives = 72/135 (53%), Gaps = 1/135 (0%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G T++P + +AL A+ AE+VR + A+ R Q EA IAL LT +A R ++LPQ Sbjct: 98 GITLTP-LQAGVLALGLNVGAYGAEVVRGAVKAIGREQREACIALNLTRFQAMRHIILPQ 156 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378 A+ ++P + + LLK +++ + D+ + QTG + + +Y +++ Sbjct: 157 ALPLMLPTFGNNAIELLKGTAVVSLISLTDMTFQAQVVRAQTGSTLIPFATILLLYFAMA 216 Query: 379 IMIALFMNRLNAKIA 393 +I++ M L +++ Sbjct: 217 WLISMGMRWLERRVS 231 >gi|94676741|ref|YP_588663.1| amino acid ABC transporter, permease protein [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] gi|94219891|gb|ABF14050.1| amino acid ABC transporter, permease protein [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] Length = 218 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 55/209 (26%), Positives = 100/209 (47%), Gaps = 36/209 (17%) Query: 193 SFVLGIVLSLFAT----------RLSRHFHEKTGKALPLLYISTFLIF-GLPTLVLIALK 241 SF +G++L L T +L +F+ + PLL + FLIF GLP+ Sbjct: 30 SFFIGLILGLLVTLIRLYSSRYLQLIANFYVWVIRGTPLL-VQLFLIFYGLPS------- 81 Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301 G T+ F + I + A+ +EI+R +++VP Q EAA Sbjct: 82 ----------------AGITLD-AFPAALIGFTLNIGAYSSEIIRGAILSVPLTQWEAAW 124 Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361 A+G+ +A V+LPQA+ +PPL + +++L+K++SLA + ++ I++ T Sbjct: 125 AIGMNSTQAMIRVILPQAIFVALPPLANSFISLIKDTSLAAVITVPEIFLAAQRIVSVTY 184 Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNA 390 + + + + IYL S ++ + +L + Sbjct: 185 EPLILYIEAAAIYLLYSTVLGKWQTKLES 213 >gi|332160646|ref|YP_004297223.1| ABC-type amino acid transport system, permease component [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|318604516|emb|CBY26014.1| putative amino acid ABC transporter, permease protein [Yersinia enterocolitica subsp. palearctica Y11] gi|325664876|gb|ADZ41520.1| ABC-type amino acid transport system, permease component [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|330862544|emb|CBX72699.1| hypothetical protein YEW_JG40470 [Yersinia enterocolitica W22703] Length = 217 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 36/108 (33%), Positives = 61/108 (56%), Gaps = 1/108 (0%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G VSP + + +AL+ +T+AF+ +I + A+P+GQ EA+ LGL+ + V+ PQ Sbjct: 79 GIDVSP-WAAAAMALTLFTSAFLVDIWCGSIDALPKGQWEASRCLGLSFSQTLFRVIAPQ 137 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 A R I P + ++K ++LA +GF +L G + N T Q ++ Sbjct: 138 ATRIAIAPTVGFSVQVIKGTALASIIGFVELTKAGTMLNNVTYQPFKV 185 >gi|313899533|ref|ZP_07833042.1| ABC transporter, permease protein [Clostridium sp. HGF2] gi|312955640|gb|EFR37299.1| ABC transporter, permease protein [Clostridium sp. HGF2] Length = 260 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 40/128 (31%), Positives = 71/128 (55%), Gaps = 14/128 (10%) Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281 LY+ F G P +V + Y H +PVL G T+ +S T A++ Sbjct: 81 LYVWIFR--GTPMMVQALIIY--HGLRPVLNWSPVTAGITI----------ISINTGAYM 126 Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341 AEI+R+G+ ++ +GQ EAA +LG+T + ++LPQA+R+ P + ++++ +K+SS+ Sbjct: 127 AEIIRAGIQSIDKGQNEAARSLGMTSTQTMMSIILPQAIRNSFPSIGNEFIVNIKDSSML 186 Query: 342 VAVGFADL 349 +G +L Sbjct: 187 NVIGVIEL 194 >gi|114764422|ref|ZP_01443648.1| putative transport system permease abc transporter protein [Pelagibaca bermudensis HTCC2601] gi|114543176|gb|EAU46194.1| putative transport system permease abc transporter protein [Roseovarius sp. HTCC2601] Length = 276 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 58/201 (28%), Positives = 95/201 (47%), Gaps = 10/201 (4%) Query: 199 VLSLFATRLSRHFHEKTGKALPLLYIST---FLIFGLPTLVLIALKYQLHFDKPVLGQFN 255 V++ FA L + TG A PL +++T +I G P L+ + L Y + + QF Sbjct: 75 VIAGFALALPLGAVQVTGPA-PLRWLATGFCTVIRGTPLLLQLWLIY--YGLGALFAQFP 131 Query: 256 FIGGSTVSPEFMSLY----IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311 I GS + P + + L+ AA+ EI+R VPRG++EAA A G+ Sbjct: 132 EIRGSWLWPYLRQAWPYGFLTLTLSFAAYQGEIMRGAFAGVPRGELEAARAFGMPRLMVF 191 Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371 R V P+A+ +P L + + LK + L + DL +V + T E +L+ + Sbjct: 192 RRVWFPRAVHRALPTLAGEIILQLKATPLVATITVTDLYAVITRVRQDTYLTYEPLLLLI 251 Query: 372 FIYLSLSIMIALFMNRLNAKI 392 IYL LS + + + L ++ Sbjct: 252 AIYLCLSGTLTIVLRWLEGRV 272 >gi|152983724|ref|YP_001349488.1| ABC transporter permease [Pseudomonas aeruginosa PA7] gi|150958882|gb|ABR80907.1| probable permease of ABC transporter [Pseudomonas aeruginosa PA7] Length = 221 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 46/143 (32%), Positives = 76/143 (53%), Gaps = 9/143 (6%) Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301 Y L+F LG F GS + +L ++ A ++AE R GL AVP Q+ AA Sbjct: 75 YILYFG---LGSFGLHVGS-----WFALLAGITFNNAGYLAETFRGGLQAVPETQLRAAR 126 Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA-DLVSVGGTIINQT 360 +LG++ +A RLV++PQ +R + PLT+Q + + +SL V VG DL V + +T Sbjct: 127 SLGMSAPQAYRLVVIPQLLRVVFYPLTNQLVWAMLMTSLGVVVGLTNDLTGVTQALNVKT 186 Query: 361 GQAIEIILIWMFIYLSLSIMIAL 383 + E + +Y +++ ++ L Sbjct: 187 FRTFEYFALAAVLYFAMAKLLVL 209 >gi|49078214|gb|AAT49762.1| PA1258 [synthetic construct] Length = 222 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 51/149 (34%), Positives = 78/149 (52%), Gaps = 19/149 (12%) Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301 Y L+F LG F G VS F +L ++ A ++AE R GL AVP Q+ AA Sbjct: 75 YILYFG---LGSF----GLHVSSWF-ALLAGVTFNNAGYLAETFRGGLQAVPETQLRAAR 126 Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361 +LG++ +A RLV++PQ +R + PLT+Q + + +SL V VG D + TG Sbjct: 127 SLGMSAPQAYRLVVIPQLLRVVFYPLTNQLVWAMLMTSLGVVVGLTD---------DLTG 177 Query: 362 --QAIEIILIWMFIYLSLSIMIALFMNRL 388 QA+ + F Y +L+ ++ M +L Sbjct: 178 VTQALNVKTFRTFEYFALAAVLYFAMAKL 206 >gi|221195858|ref|ZP_03568911.1| permease protein of ABC transporter system [Atopobium rimae ATCC 49626] gi|221184332|gb|EEE16726.1| permease protein of ABC transporter system [Atopobium rimae ATCC 49626] Length = 217 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 36/121 (29%), Positives = 68/121 (56%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + L+ +++AE +RSG +V R Q E+A LGL+ +++ V+LPQA+ +P L + Sbjct: 91 VGLTFLGGSYMAEALRSGFDSVERIQEESAWVLGLSQKQSLWYVVLPQALSVSLPSLVAN 150 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 + L+K SS+ A+ ADL+ V +I E + + + Y+ + + ++L +RL Sbjct: 151 TIFLIKESSVVSAIALADLMFVAKDLIGMMYNTTEALFMLVVAYILILVPVSLMGSRLER 210 Query: 391 K 391 + Sbjct: 211 R 211 >gi|296454582|ref|YP_003661725.1| polar amino acid ABC transporter inner membrane subunit [Bifidobacterium longum subsp. longum JDM301] gi|296184013|gb|ADH00895.1| polar amino acid ABC transporter, inner membrane subunit [Bifidobacterium longum subsp. longum JDM301] Length = 569 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 31/89 (34%), Positives = 59/89 (66%) Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322 SP + ++ +AL Y + +AE+VRSG+ +P GQ EA++ALGLT ++ + +PQA+ + Sbjct: 344 SPSYWAVVLALVLYNGSVVAELVRSGVGNLPGGQREASLALGLTETQSLMEIEVPQAVYA 403 Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 ++P +Q + +LK+++L + + DL+ Sbjct: 404 MLPAAVTQLVVVLKDTALGSIIMYTDLLQ 432 >gi|188534297|ref|YP_001908094.1| arginine transporter permease subunit ArtQ [Erwinia tasmaniensis Et1/99] gi|188029339|emb|CAO97216.1| Arginine transport system permease protein [Erwinia tasmaniensis Et1/99] Length = 238 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 52/186 (27%), Positives = 97/186 (52%), Gaps = 12/186 (6%) Query: 217 KALPLLYISTFLIFGLPTLVL-IALKYQLHF---DKPVLGQFNFIGGSTVSPEFMSLYIA 272 +ALP + + F+ FG L+L ++ + L+ PV Q N I VSP F+ IA Sbjct: 55 RALPEILVVLFIYFGASQLLLTLSDGFTLNLALVQIPV--QVN-IENFDVSP-FLCGVIA 110 Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 L+ +++ ++ +R L AVP+GQ E+ ALG+ +++PQ R +P L +Q+L Sbjct: 111 LAILYSSYASQTLRGALKAVPQGQWESGQALGMKKSAIFVRLIVPQMWRHALPGLGNQWL 170 Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 LLK+++L + D++ +I +T + W + ++ ++I LF ++ +I Sbjct: 171 VLLKDTALVSLISVNDIMLQTKSIATRTQEP----FTWYVVAAAIYLLITLFSQQVLKRI 226 Query: 393 ALKEKK 398 L+ + Sbjct: 227 ELRTTR 232 >gi|170732503|ref|YP_001764450.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia cenocepacia MC0-3] gi|169815745|gb|ACA90328.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia cenocepacia MC0-3] Length = 229 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 49/189 (25%), Positives = 94/189 (49%), Gaps = 6/189 (3%) Query: 212 HEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQF-NFIGGSTVSPE-FMSL 269 H + +A+ Y T LI +P LVL+ L + + + L QF + +G + + + F++ Sbjct: 42 HNRVLRAIATGY--TTLIRSVPDLVLMLLLF--YSIQIWLNQFTDLVGWNQIDIDPFVAG 97 Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329 + L A+ E R ++VPRGQ+EA A G++ + ++ PQ MR +P + + Sbjct: 98 VLTLGFIYGAYFTETFRGAFLSVPRGQLEAGSAYGMSGARVFARIMFPQMMRFALPGIGN 157 Query: 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 + L+K ++L +G AD+V T IL+ IYL+++ + L + +L Sbjct: 158 NWQVLVKATALVSIIGLADVVKAAQDAGKSTFNMFFFILVAALIYLAITTVSNLVLIQLE 217 Query: 390 AKIALKEKK 398 + ++ + Sbjct: 218 KRYSMGVRH 226 >gi|15596455|ref|NP_249949.1| permease of ABC transporter [Pseudomonas aeruginosa PAO1] gi|107100707|ref|ZP_01364625.1| hypothetical protein PaerPA_01001734 [Pseudomonas aeruginosa PACS2] gi|116049210|ref|YP_791987.1| putative permease of ABC transporter [Pseudomonas aeruginosa UCBPP-PA14] gi|254234385|ref|ZP_04927708.1| hypothetical protein PACG_00228 [Pseudomonas aeruginosa C3719] gi|9947190|gb|AAG04647.1|AE004555_7 probable permease of ABC transporter [Pseudomonas aeruginosa PAO1] gi|115584431|gb|ABJ10446.1| putative permease of ABC transporter [Pseudomonas aeruginosa UCBPP-PA14] gi|126166316|gb|EAZ51827.1| hypothetical protein PACG_00228 [Pseudomonas aeruginosa C3719] Length = 221 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 51/149 (34%), Positives = 78/149 (52%), Gaps = 19/149 (12%) Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301 Y L+F LG F G VS F +L ++ A ++AE R GL AVP Q+ AA Sbjct: 75 YILYFG---LGSF----GLHVSSWF-ALLAGVTFNNAGYLAETFRGGLQAVPETQLRAAR 126 Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361 +LG++ +A RLV++PQ +R + PLT+Q + + +SL V VG D + TG Sbjct: 127 SLGMSAPQAYRLVVIPQLLRVVFYPLTNQLVWAMLMTSLGVVVGLTD---------DLTG 177 Query: 362 --QAIEIILIWMFIYLSLSIMIALFMNRL 388 QA+ + F Y +L+ ++ M +L Sbjct: 178 VTQALNVKTFRTFEYFALAAVLYFAMAKL 206 >gi|325686265|gb|EGD28307.1| ABC superfamily ATP binding cassette transporter, membrane protein [Lactobacillus delbrueckii subsp. lactis DSM 20072] Length = 224 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 43/151 (28%), Positives = 79/151 (52%), Gaps = 12/151 (7%) Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281 +Y+ F I +PT+VL+ Y +++ P N+ P +A S + AA Sbjct: 60 IYLEFFRI--VPTIVLL---YLVYYILPRTFHVNW-------PATWMAVLAFSLWVAAEF 107 Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341 ++IVR + +VP+ Q E+ +ALGL+ + R VLLPQA++ +P + ++K +SL Sbjct: 108 SDIVRGAIESVPKSQRESGLALGLSKIQLFRYVLLPQAVKLELPATINLATRVIKTTSLL 167 Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMF 372 + + ++++VG II Q + W++ Sbjct: 168 LVISIMEVINVGQQIIEANNQQNPTGVFWVY 198 Score = 41.6 bits (96), Expect = 0.22, Method: Compositional matrix adjust. Identities = 23/78 (29%), Positives = 43/78 (55%), Gaps = 1/78 (1%) Query: 72 IDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRV 131 + GI S++A ++ G + W+A +I IGT+ G R NK++ + R+ Sbjct: 2 VHSGINVLFEGSNFAR-LMAGLWTSIWIAAISLIIGLAIGTIFGILRTLTNKIIRFALRI 60 Query: 132 YVEVFRNIPPLVVIFFLY 149 Y+E FR +P +V+++ +Y Sbjct: 61 YLEFFRIVPTIVLLYLVY 78 >gi|288905751|ref|YP_003430973.1| amino acid ABC transporter, integral membrane protein [Streptococcus gallolyticus UCN34] gi|325978784|ref|YP_004288500.1| putative amino acid ABC transporter integral membrane protein [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] gi|288732477|emb|CBI14049.1| Putative amino acid ABC transporter, integral membrane protein [Streptococcus gallolyticus UCN34] gi|325178712|emb|CBZ48756.1| putative amino acid ABC transporter integral membrane protein [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] Length = 215 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 28/73 (38%), Positives = 49/73 (67%) Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 A + +T+A +AEI+R GL V GQ EA +A G+T+ + ++ PQA R ++P + SQ+ Sbjct: 86 AFTVFTSAALAEIIRGGLNGVDDGQTEAGLAQGMTNFQIFIYIIFPQAFRKMLPAIISQF 145 Query: 332 LNLLKNSSLAVAV 344 + ++K++SL +V Sbjct: 146 VTVIKDTSLLYSV 158 Score = 44.7 bits (104), Expect = 0.027, Method: Compositional matrix adjust. Identities = 21/61 (34%), Positives = 38/61 (62%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 IL G T +++F ++ +T+IGT++ R N ++ WI +Y+E RN+P L+ IF + Sbjct: 12 ILQGLWLTIYISFISIVLSTLIGTVLAVMRNGKNPILRWISSIYIEFVRNVPNLLWIFII 71 Query: 149 Y 149 + Sbjct: 72 F 72 >gi|323529852|ref|YP_004232004.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia sp. CCGE1001] gi|323386854|gb|ADX58944.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. CCGE1001] Length = 240 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 48/179 (26%), Positives = 87/179 (48%), Gaps = 7/179 (3%) Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVL----GQFNFIGGSTVSPEFMSLYIALSCYTAA 279 I T + G+P L++I Y +F L GQ+ G P F+ +A+ + A Sbjct: 60 IYTTVFRGVPELLVI---YLFYFGGSTLVTTVGQWFGAEGFVGVPPFVIGALAVGMISGA 116 Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339 + AE+ RS ++AV RG++EAA ++G+ R +L+PQ +R +P + + + LK+S+ Sbjct: 117 YQAEVYRSAVLAVSRGELEAARSIGMPTLTMARRILIPQVLRFALPGIGNVWQLSLKDSA 176 Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 L G A+L+ T Q ++ +YL ++ + N A++ K+ Sbjct: 177 LISVTGLAELLRTSQVAAGSTHQYFTFFVVGGALYLLMTSISNRVFNHAEARVGRSFKR 235 >gi|307255256|ref|ZP_07537071.1| Arginine ABC transporter permease protein artQ [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|307259691|ref|ZP_07541414.1| Arginine ABC transporter permease protein artQ [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|306861805|gb|EFM93784.1| Arginine ABC transporter permease protein artQ [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306866231|gb|EFM98096.1| Arginine ABC transporter permease protein artQ [Actinobacillus pleuropneumoniae serovar 11 str. 56153] Length = 223 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 37/127 (29%), Positives = 68/127 (53%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +ALS +A+ ++ +R + AVP GQ E+ ALGL+ +++PQ R +P L++Q Sbjct: 94 LALSLIFSAYASQSLRGAIQAVPNGQWESGAALGLSRAHTFLKIIMPQVWRHALPGLSNQ 153 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 +L LLK+++L +G DL+ I Q + IYL+++++ + + RL Sbjct: 154 WLVLLKDTALISLIGVDDLMRQTDLINTNEHQPFTWYGLAALIYLAITLISQVIIARLEK 213 Query: 391 KIALKEK 397 + E+ Sbjct: 214 RFTRFER 220 >gi|306833971|ref|ZP_07467095.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus bovis ATCC 700338] gi|304423972|gb|EFM27114.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus bovis ATCC 700338] Length = 215 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 28/73 (38%), Positives = 49/73 (67%) Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 A + +T+A +AEI+R GL V GQ EA +A G+T+ + ++ PQA R ++P + SQ+ Sbjct: 86 AFTVFTSAALAEIIRGGLNGVDDGQTEAGLAQGMTNLQIFIYIIFPQAFRKMLPAIISQF 145 Query: 332 LNLLKNSSLAVAV 344 + ++K++SL +V Sbjct: 146 VTVIKDTSLLYSV 158 Score = 44.7 bits (104), Expect = 0.025, Method: Compositional matrix adjust. Identities = 21/61 (34%), Positives = 38/61 (62%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 IL G T +++F ++ +T+IGT++ R N ++ WI +Y+E RN+P L+ IF + Sbjct: 12 ILQGLWLTIYISFIAIVLSTLIGTVLAVMRNGKNPILRWISSIYIEFVRNVPNLLWIFII 71 Query: 149 Y 149 + Sbjct: 72 F 72 >gi|300812424|ref|ZP_07092854.1| conserved hypothetical protein [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|300496591|gb|EFK31683.1| conserved hypothetical protein [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] Length = 230 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 43/151 (28%), Positives = 79/151 (52%), Gaps = 12/151 (7%) Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281 +Y+ F I +PT+VL+ Y +++ P N+ P +A S + AA Sbjct: 66 IYLEFFRI--VPTIVLL---YLVYYILPRTFHVNW-------PATWMAVLAFSLWVAAEF 113 Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341 ++IVR + +VP+ Q E+ +ALGL+ + R VLLPQA++ +P + ++K +SL Sbjct: 114 SDIVRGAIESVPKSQRESGLALGLSKIQLFRYVLLPQAVKLELPATINLATRVIKTTSLL 173 Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMF 372 + + ++++VG II Q + W++ Sbjct: 174 LVISIMEVINVGQQIIEANNQQNPTGVFWVY 204 Score = 41.6 bits (96), Expect = 0.21, Method: Compositional matrix adjust. Identities = 23/78 (29%), Positives = 43/78 (55%), Gaps = 1/78 (1%) Query: 72 IDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRV 131 + GI S++A ++ G + W+A +I IGT+ G R NK++ + R+ Sbjct: 8 VHSGINVLFEGSNFAR-LMAGLWTSIWIAAISLIIGLAIGTIFGILRTLTNKIIRFALRI 66 Query: 132 YVEVFRNIPPLVVIFFLY 149 Y+E FR +P +V+++ +Y Sbjct: 67 YLEFFRIVPTIVLLYLVY 84 >gi|300694624|ref|YP_003750597.1| amino-acid ABC transporter protein [Ralstonia solanacearum PSI07] gi|299076661|emb|CBJ35999.1| putative amino-acid ABC transporter protein [Ralstonia solanacearum PSI07] Length = 223 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 54/201 (26%), Positives = 96/201 (47%), Gaps = 22/201 (10%) Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL---YISTFLIFGLPTLVLIALKYQL 244 K+ +GI L + A L+ + + L L Y++T + +P L+L+ L + Sbjct: 20 KVTAIVSAIGIPLGMLAGTLAAYAAQPRSLMLACLARGYVAT--VRNIPYLILVYLSF-- 75 Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSC---YTAAFIAEIVRSGLIAVPRGQMEAAI 301 F P LG V M+ +A+ C YT + EI+R+ L +VPRGQ AA+ Sbjct: 76 -FGLPKLG---------VPASAMA--VAIGCTALYTGGYFCEILRAALCSVPRGQSSAAL 123 Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361 +LG++ + R ++ PQ + +IPP TS + + K+S++ + ++ + T Sbjct: 124 SLGMSRWQVQRYIVAPQLLGFLIPPTTSLVIMMFKDSAIFSVMSLPEMTYQSNLLTANTF 183 Query: 362 QAIEIILIWMFIYLSLSIMIA 382 EI+ IY S+++A Sbjct: 184 AYTEILAATAAIYWLTSVLLA 204 >gi|218892768|ref|YP_002441637.1| putative permease of ABC transporter [Pseudomonas aeruginosa LESB58] gi|218772996|emb|CAW28808.1| probable permease of ABC transporter [Pseudomonas aeruginosa LESB58] Length = 221 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 51/149 (34%), Positives = 78/149 (52%), Gaps = 19/149 (12%) Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301 Y L+F LG F G VS F +L ++ A ++AE R GL AVP Q+ AA Sbjct: 75 YILYFG---LGSF----GLHVSSWF-ALLAGVTFNNAGYLAETFRGGLQAVPETQLRAAR 126 Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361 +LG++ +A RLV++PQ +R + PLT+Q + + +SL V VG D + TG Sbjct: 127 SLGMSAPQAYRLVVIPQLLRVVFYPLTNQLVWAMLMTSLGVVVGLTD---------DLTG 177 Query: 362 --QAIEIILIWMFIYLSLSIMIALFMNRL 388 QA+ + F Y +L+ ++ M +L Sbjct: 178 VTQALNVKTFRTFEYFALAAVLYFAMAKL 206 >gi|220905022|ref|YP_002480334.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219869321|gb|ACL49656.1| polar amino acid ABC transporter, inner membrane subunit [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 230 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 44/162 (27%), Positives = 82/162 (50%), Gaps = 11/162 (6%) Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290 G+P LVL+ L Y L FI + F+ + L C + A+ ++I R + Sbjct: 63 GVPILVLLFLCYGL-----------FISLGLPADPFLICCLVLGCTSTAYQSQIFRGAIE 111 Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 ++P+GQ+ AA ALG+ ++LPQAMR IP +++ LLK+S++ +G D++ Sbjct: 112 SLPQGQLNAARALGMGEGTGICSIILPQAMRLSIPGWANEFSILLKDSAICYVLGTQDIM 171 Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 + + +T + + + IY L++ + + RL ++ Sbjct: 172 ARTSFVAARTHEHLALYAAAGCIYFLLTLAVLKLLRRLEKRV 213 >gi|91225247|ref|ZP_01260415.1| amino acid ABC transporter, permease protein [Vibrio alginolyticus 12G01] gi|269967641|ref|ZP_06181691.1| amino acid ABC transporter, permease protein [Vibrio alginolyticus 40B] gi|91189886|gb|EAS76158.1| amino acid ABC transporter, permease protein [Vibrio alginolyticus 12G01] gi|269827728|gb|EEZ82012.1| amino acid ABC transporter, permease protein [Vibrio alginolyticus 40B] Length = 246 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 55/185 (29%), Positives = 92/185 (49%), Gaps = 27/185 (14%) Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVL---------I 238 ++ V S +L +VL + L++ K +A+ LY T +I G+P LVL I Sbjct: 20 EVAVLSLILAMVLGMLGA-LAKLAPYKWARAIATLY--TTVIRGIPDLVLMMLIFFGGQI 76 Query: 239 ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL---YIALSCYTA----------AFIAEIV 285 L L+ L ++ S + E+ S YI +S + A A++AE Sbjct: 77 LLNNSLYSINETLNEW--FASSDPNHEWTSYLPDYIDVSPFIAGVLTIGFIFGAYMAETF 134 Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345 R ++AV +G++EAA A G++ + R +LLPQ +R +P + +L LLK ++L +G Sbjct: 135 RGAIMAVDKGELEAAKAYGMSSALSFRRILLPQMIRHALPGFGNNWLVLLKTTALVSIIG 194 Query: 346 FADLV 350 D+V Sbjct: 195 LDDMV 199 >gi|330816869|ref|YP_004360574.1| ABC amino acid transporter, inner membrane subunit [Burkholderia gladioli BSR3] gi|327369262|gb|AEA60618.1| ABC amino acid transporter, inner membrane subunit [Burkholderia gladioli BSR3] Length = 241 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 41/124 (33%), Positives = 68/124 (54%), Gaps = 7/124 (5%) Query: 231 GLPTLVLIALKYQLHFDKPVL----GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286 G+P L++I Y +F L GQ+ G P F +A+ + A+ AE+ R Sbjct: 68 GVPELLVI---YLFYFGGSSLVTTIGQWFGADGFVGVPPFAIGAVAVGMISGAYQAEVYR 124 Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346 + ++AV RG++EAA A+G+ A R +L+PQ +R +P L + + LK+S+L G Sbjct: 125 AAVLAVSRGELEAARAIGMPRLTAARRILIPQVLRFALPGLGNVWQLSLKDSALISVTGL 184 Query: 347 ADLV 350 A+L+ Sbjct: 185 AELL 188 Score = 40.8 bits (94), Expect = 0.34, Method: Compositional matrix adjust. Identities = 21/69 (30%), Positives = 37/69 (53%) Query: 81 SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140 + + +L+G + T L S ++ ++ G LV A +LS +L+ + Y VFR +P Sbjct: 11 GSEGWGSVLLLGALMTIVLTLSALLIGSVFGGLVAAAKLSRFRLLRVLGDCYTTVFRGVP 70 Query: 141 PLVVIFFLY 149 L+VI+ Y Sbjct: 71 ELLVIYLFY 79 >gi|163743506|ref|ZP_02150884.1| amino acid ABC transproter, permease protein [Phaeobacter gallaeciensis 2.10] gi|161383209|gb|EDQ07600.1| amino acid ABC transproter, permease protein [Phaeobacter gallaeciensis 2.10] Length = 224 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 54/174 (31%), Positives = 88/174 (50%), Gaps = 16/174 (9%) Query: 219 LPLLYISTFLIFGLPTLV-LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT 277 L +L+IS F G P LV L Y L VL Q N + + + L+ + Sbjct: 55 LVVLFISFFR--GTPLLVQLFLFYYGLPQVLSVLTQINGVSAAI---------MGLTLHF 103 Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 AA++AE +R+ ++ V R Q EAA ++G+T + R ++LPQA R P L + +++++K Sbjct: 104 AAYMAESIRAAILGVDRSQWEAAQSIGMTRGQMMRRIVLPQAARIAAPTLVNYFIDMIKG 163 Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAI--EIILIWMFIYLSLSIMIALFMNRLN 389 +SLA +G ++ +G T G + E L+ IY L ++L RL Sbjct: 164 TSLAFTLGVTEM--MGATQKEAAGSFLYFEAFLVVAVIYWILVEALSLVQRRLE 215 >gi|148977576|ref|ZP_01814155.1| amino acid ABC transporter, permease protein [Vibrionales bacterium SWAT-3] gi|145963227|gb|EDK28494.1| amino acid ABC transporter, permease protein [Vibrionales bacterium SWAT-3] Length = 246 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 53/193 (27%), Positives = 94/193 (48%), Gaps = 23/193 (11%) Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY---QL 244 ++ + S +L +VL + L++ + +A+ LY T +I G+P LVL+ L + Q+ Sbjct: 20 EVALLSLILAMVLGMLGA-LAKLAPYRWARAIATLY--TTVIRGIPDLVLMMLIFFGGQI 76 Query: 245 HFDKPVLGQFNFIGGSTVSPE-------FMSLYIALSCYTA----------AFIAEIVRS 287 + + ++ S + ++ YI +S + A A++AE R Sbjct: 77 LLNNSLYSINEWLNEWFTSSDPNHEWTSYLPDYIDVSPFVAGVLTIGFIFGAYMAETFRG 136 Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347 ++AV G+MEAA A G++ KA +LLPQ +R +P + +L LLK ++L +G Sbjct: 137 AIMAVDAGEMEAAKAYGMSPVKAFHRILLPQMIRHALPGFGNNWLVLLKTTALVSIIGLE 196 Query: 348 DLVSVGGTIINQT 360 D+V V T Sbjct: 197 DMVRVSALAAGST 209 >gi|254245861|ref|ZP_04939182.1| Amino acid ABC transporter, permease protein [Burkholderia cenocepacia PC184] gi|124870637|gb|EAY62353.1| Amino acid ABC transporter, permease protein [Burkholderia cenocepacia PC184] Length = 253 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 53/209 (25%), Positives = 103/209 (49%), Gaps = 7/209 (3%) Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247 ++ V S + L L +++ H + +A+ Y T LI +P LVL+ L + + Sbjct: 43 ELSVLSLATAVALGLIGA-VAKLSHNRVLRAIATGY--TTLIRSVPDLVLMLLLF--YSI 97 Query: 248 KPVLGQF-NFIGGSTVSPE-FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305 + L QF + +G + + + F++ + L A+ E R ++VPRGQ+EA A G+ Sbjct: 98 QIWLNQFTDLVGWNQIDIDPFVAGVLTLGFIYGAYFTETFRGAFLSVPRGQLEAGSAYGM 157 Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365 + + ++ PQ MR +P + + + L+K ++L +G AD+V T Sbjct: 158 SGARVFARIMFPQMMRFALPGIGNNWQVLVKATALVSIIGLADVVKAAQDAGKSTFNMFF 217 Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIAL 394 IL+ IYL+++ + L + +L + ++ Sbjct: 218 FILVAALIYLAITTVSNLVLIQLEKRYSM 246 >gi|269960968|ref|ZP_06175337.1| amino acid ABC transporter, permease protein [Vibrio harveyi 1DA3] gi|269834187|gb|EEZ88277.1| amino acid ABC transporter, permease protein [Vibrio harveyi 1DA3] Length = 246 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 62/233 (26%), Positives = 107/233 (45%), Gaps = 34/233 (14%) Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVL---------I 238 ++ V S +L +VL + L++ K +A+ LY T +I G+P LVL I Sbjct: 20 EVAVLSLILAVVLGMLGA-LAKLAPYKWARAIATLY--TTIIRGIPDLVLMMLIFFGGQI 76 Query: 239 ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL---YIALSCYTA----------AFIAEIV 285 L L+ L ++ S E+ S YI +S + A A++AE Sbjct: 77 LLNNSLYSINETLNEW--FTSSNPDHEWTSYLPDYIDVSPFIAGVLTIGFIFGAYMAETF 134 Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345 R ++AV +G++EAA A G++ + R +LLPQ +R +P + +L LLK ++L +G Sbjct: 135 RGAIMAVDKGELEAAKAYGMSPVMSFRRILLPQMIRHALPGFGNNWLVLLKTTALVSIIG 194 Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 D+V + T Y++++I+ F + + L E+K Sbjct: 195 LEDMVRMSSLAAGTTKMPFT-------FYMAVAIIFLFFTSVSTGLLKLVERK 240 >gi|254239634|ref|ZP_04932956.1| hypothetical protein PA2G_00251 [Pseudomonas aeruginosa 2192] gi|126193012|gb|EAZ57075.1| hypothetical protein PA2G_00251 [Pseudomonas aeruginosa 2192] Length = 221 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 51/149 (34%), Positives = 78/149 (52%), Gaps = 19/149 (12%) Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301 Y L+F LG F G VS F +L ++ A ++AE R GL AVP Q+ AA Sbjct: 75 YILYFG---LGSF----GLHVSSWF-ALLAGVTFNNAGYLAETFRGGLQAVPETQLRAAR 126 Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361 +LG++ +A RLV++PQ +R + PLT+Q + + +SL V VG D + TG Sbjct: 127 SLGMSAPQAYRLVVIPQLLRVVFYPLTNQLVWAMLMTSLGVVVGLTD---------DLTG 177 Query: 362 --QAIEIILIWMFIYLSLSIMIALFMNRL 388 QA+ + F Y +L+ ++ M +L Sbjct: 178 VTQALNVKTFRTFEYFALAAVLYFAMAKL 206 >gi|329117083|ref|ZP_08245800.1| ABC transporter, permease protein [Streptococcus parauberis NCFD 2020] gi|326907488|gb|EGE54402.1| ABC transporter, permease protein [Streptococcus parauberis NCFD 2020] Length = 215 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 45/163 (27%), Positives = 82/163 (50%), Gaps = 11/163 (6%) Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290 G+P +V++ + L+F P G F P + I + +AA++AE+ R + Sbjct: 63 GVPMIVVL---FVLYFGLPYYG-FQL-------PALLCALIGFTMVSAAYMAEVFRGSIE 111 Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 AV GQ EAA ALGL + + V+LPQA R +P L + ++++K+SSL + D+ Sbjct: 112 AVDFGQWEAARALGLPYASIVKQVILPQAFRIAVPSLGNVIIDMVKSSSLTAMITVPDIF 171 Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393 I ++ + + ++ IY ++I++ + K+A Sbjct: 172 QNAKIIGSREWDYMSMYILVALIYWGITIVLEKSQAVIEEKLA 214 >gi|171320532|ref|ZP_02909558.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria MEX-5] gi|171094225|gb|EDT39306.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia ambifaria MEX-5] Length = 219 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 56/207 (27%), Positives = 103/207 (49%), Gaps = 14/207 (6%) Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247 K V S LG+V+ L + R + L Y+S L+ G P LV + + +++ Sbjct: 23 KFAVASMALGLVVGLVVA-IMRIGSNRLASGLAQGYVS--LMRGTPLLVQM---FVVYYG 76 Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307 P LG T+ P ++ L+ A+++E +R ++ + RGQ AA +LGLTH Sbjct: 77 LPDLG-------ITLDPTTAGIF-TLTLNAGAYLSESMRGAILGIGRGQWAAAHSLGLTH 128 Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367 + R ++ PQA+R +P L + ++L+K++SL + +L+ +I T Q + + Sbjct: 129 MQTLRHIVCPQALRLAVPSLGNTLISLIKDTSLVSVITVTELLRSTQEVIAATFQPLPLY 188 Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIAL 394 L +Y LS ++ R+ +++L Sbjct: 189 LAAAALYWVLSTLLTRLQGRVETRLSL 215 >gi|160936725|ref|ZP_02084092.1| hypothetical protein CLOBOL_01616 [Clostridium bolteae ATCC BAA-613] gi|158440516|gb|EDP18261.1| hypothetical protein CLOBOL_01616 [Clostridium bolteae ATCC BAA-613] Length = 171 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 29/77 (37%), Positives = 49/77 (63%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F S + S T A+ +E +R+ + AVP GQ+EA +GL++ + ++LPQA+R P Sbjct: 42 FPSAVVVFSVNTGAYASETIRAAIEAVPAGQLEAGYCVGLSYTQTMMRIILPQALRIAFP 101 Query: 326 PLTSQYLNLLKNSSLAV 342 PL++ + L+K++SLA Sbjct: 102 PLSNSLIGLVKDTSLAA 118 >gi|190894713|ref|YP_001985006.1| putative amino acid ABC transporter permease [Rhizobium etli CIAT 652] gi|190700374|gb|ACE94456.1| probable amino acid ABC transporter, permease protein [Rhizobium etli CIAT 652] Length = 219 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 34/95 (35%), Positives = 55/95 (57%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I + + A + AE+ R+G+ VPRGQ EAA A L R+A V+LPQA+ +IP L + Sbjct: 93 IGMGIHYATYTAEVYRAGIENVPRGQWEAARATNLATRQAWIHVVLPQAIPPMIPALANY 152 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365 ++ + K + L A+ +L++ +I N + IE Sbjct: 153 FIAMFKETPLLSAITVLELMNQAKSIANSNYRYIE 187 >gi|13475942|ref|NP_107512.1| amino acid ABC transporter protein, permease protein [Mesorhizobium loti MAFF303099] gi|14026702|dbj|BAB53298.1| amino acid ABC transporter protein, permease protein [Mesorhizobium loti MAFF303099] Length = 219 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 36/134 (26%), Positives = 71/134 (52%) Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 P ++ I L + + AE+ R+G+ VPRGQ EAA A L+ R+ +++PQA+ + Sbjct: 86 PPLVAGVIGLGLHYGTYTAEVYRAGIDNVPRGQWEAAKACNLSARQTWTHIIIPQAIPPM 145 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 IP L + ++ + K + L A+ +L++ ++ N + IE I + +L++S+ + Sbjct: 146 IPALANYFIAMFKETPLLSAITVLELMNQARSVANTYYRYIEPITLVGAFFLAISLCSVV 205 Query: 384 FMNRLNAKIALKEK 397 + L + E+ Sbjct: 206 LLRWLERRYGKIER 219 >gi|330892336|gb|EGH24997.1| amino acid ABC transporter permease [Pseudomonas syringae pv. mori str. 301020] Length = 231 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 49/180 (27%), Positives = 87/180 (48%), Gaps = 23/180 (12%) Query: 214 KTGKALPLLYI-STF--LIFGLPTLVLIALKY----------QLHFDKPVLGQFNFIGGS 260 KT PL ++ ST+ L+ G+P L+ + L Y FD P L F G Sbjct: 41 KTSPYKPLQWLGSTYSTLVRGIPELLWVLLIYFGTVNGMRALGKLFDIPDLALSAFSAG- 99 Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320 IAL A+ E+ R ++A+P+G EA +ALG++ + ++LPQ Sbjct: 100 ---------VIALGICFGAYATEVFRGAILAIPKGHREAGLALGMSRSRILFKLVLPQMW 150 Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380 R +P L + ++ L+K+++L +G +++ + T QA ++ F+YL L+++ Sbjct: 151 RIALPGLGNLFMILMKDTALVSVIGLEEIMRHAQIAVGFTKQAFTFYVVAAFMYLGLTVL 210 >gi|270292048|ref|ZP_06198263.1| amino acid ABC transporter, permease protein [Streptococcus sp. M143] gi|293364294|ref|ZP_06611020.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus oralis ATCC 35037] gi|307702740|ref|ZP_07639692.1| nopaline transport system permease protein nocM [Streptococcus oralis ATCC 35037] gi|322374985|ref|ZP_08049499.1| amino acid ABC transporter, permease protein [Streptococcus sp. C300] gi|270279576|gb|EFA25418.1| amino acid ABC transporter, permease protein [Streptococcus sp. M143] gi|291317140|gb|EFE57567.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus oralis ATCC 35037] gi|307623856|gb|EFO02841.1| nopaline transport system permease protein nocM [Streptococcus oralis ATCC 35037] gi|321280485|gb|EFX57524.1| amino acid ABC transporter, permease protein [Streptococcus sp. C300] Length = 240 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 51/169 (30%), Positives = 89/169 (52%), Gaps = 9/169 (5%) Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248 I + + VL + +LF L + + + ++ L+Y++ I P ++LI Y L Sbjct: 23 IMIVAMVLSFLPALFLA-LGQIYKVRGVRSFSLVYLA--FIRATPPILLILFFYSLF--P 77 Query: 249 PVLGQF-NFIGGSTVSPEFMSLYIALSCY---TAAFIAEIVRSGLIAVPRGQMEAAIALG 304 +L QF IG + LY A Y T ++EI+RS ++ V +GQ+EAA A+G Sbjct: 78 SLLNQFLKSIGSDFDIFKLDPLYYAFIIYSLMTVGSLSEILRSAILTVDKGQLEAAHAIG 137 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353 LT +A ++ PQA+RS +P L + +N++K +SL + D+ ++ Sbjct: 138 LTTTQAYLRIVFPQALRSALPNLANLVINIVKGTSLVFVMTIKDITAIA 186 >gi|325578843|ref|ZP_08148890.1| arginine ABC superfamily ATP binding cassette transporter, permease protein [Haemophilus parainfluenzae ATCC 33392] gi|325159667|gb|EGC71799.1| arginine ABC superfamily ATP binding cassette transporter, permease protein [Haemophilus parainfluenzae ATCC 33392] Length = 223 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 37/126 (29%), Positives = 68/126 (53%) Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 ALS A++ ++ +R + A+P+GQ E+ ALGL+ +++PQ R +P L++Q+ Sbjct: 95 ALSLIFASYASQTLRGAIQAIPKGQWESGAALGLSRPYTFIHLIMPQVWRHALPGLSNQW 154 Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 L LLK+++L +G DL+ G I T + I IYL ++++ + +L + Sbjct: 155 LVLLKDTALVSLIGVDDLMRQAGYINTNTHEPFTWYGIAALIYLVITLISQAGIRKLELR 214 Query: 392 IALKEK 397 E+ Sbjct: 215 FTRFER 220 >gi|270261143|ref|ZP_06189416.1| transporter [Serratia odorifera 4Rx13] gi|270044627|gb|EFA17718.1| transporter [Serratia odorifera 4Rx13] Length = 238 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 62/224 (27%), Positives = 110/224 (49%), Gaps = 26/224 (11%) Query: 191 VFSFVLGIVLS-LFATRLSRHFHEKTG---------KALPLLYISTFLIFGLPTLVLI-- 238 V + +LG++L+ LFA S + + + LP + + F+ FG L+L+ Sbjct: 19 VCALILGLILAMLFAVWESSRWKVVSWLGTAWVTLLRGLPEILVVLFIYFGSSQLLLMLS 78 Query: 239 ---ALKYQLHFDKPV-LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294 L + L F P+ L NF VSP F+ IAL+ +A+ ++ +R L AVP+ Sbjct: 79 DGFTLNFGL-FQLPIQLAIDNF----EVSP-FLCGVIALALLYSAYASQTLRGALKAVPQ 132 Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354 GQ E+ ALG++ +++PQ R +P L +Q+L LLK+++L + DL+ Sbjct: 133 GQWESGQALGMSTAAIFFRLIMPQMWRHALPGLGNQWLVLLKDTALVSLISVNDLMLQTK 192 Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 +I +T + W I ++ +++ LF +I L+ + Sbjct: 193 SIATRTQEP----FTWYVIAAAIYLVVTLFSQYAIKRIELRTTR 232 >gi|88855457|ref|ZP_01130121.1| glutamate permease [marine actinobacterium PHSC20C1] gi|88815364|gb|EAR25222.1| glutamate permease [marine actinobacterium PHSC20C1] Length = 309 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 36/116 (31%), Positives = 64/116 (55%), Gaps = 6/116 (5%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I L+ Y A I E +R+G+ ++P+GQ E +++GLT + ++ PQA R ++P + +Q Sbjct: 146 IGLAVYNGAIIGEALRAGISSLPKGQREGGLSVGLTSLQTRFIIEFPQAFRQMLPIILAQ 205 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386 + LLK++SLA V + +L + N G ++F ++ +I L MN Sbjct: 206 LVVLLKDTSLAYVVSYPELARTIKNLQNFYGSR------YLFTLFAVGFVIYLVMN 255 >gi|134295205|ref|YP_001118940.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia vietnamiensis G4] gi|134138362|gb|ABO54105.1| amino acid ABC transporter membrane protein 1, PAAT family [Burkholderia vietnamiensis G4] Length = 229 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 49/189 (25%), Positives = 93/189 (49%), Gaps = 6/189 (3%) Query: 212 HEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQF-NFIGGSTVSPE-FMSL 269 H + +A+ Y T LI +P LVL+ L + + + L QF + +G + + F++ Sbjct: 42 HNRVLRAIATGY--TTLIRSVPDLVLMLLLF--YSIQIWLNQFTDLLGWDQIDIDPFVAG 97 Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329 + L A+ E R ++VPRGQ+EA A G++ + ++ PQ MR +P + + Sbjct: 98 VLTLGFIYGAYFTETFRGAFLSVPRGQLEAGAAYGMSGARVFARIMFPQMMRFALPGIGN 157 Query: 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 + L+K ++L +G AD+V T IL+ IYL+++ + L + +L Sbjct: 158 NWQVLVKATALVSIIGLADVVKAAQDAGKSTFNMFFFILVAALIYLAITTVSNLVLIQLE 217 Query: 390 AKIALKEKK 398 + ++ + Sbjct: 218 KRYSMGVRH 226 >gi|217033979|ref|ZP_03439402.1| hypothetical protein HP9810_883g49 [Helicobacter pylori 98-10] gi|216943612|gb|EEC23060.1| hypothetical protein HP9810_883g49 [Helicobacter pylori 98-10] Length = 237 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 53/203 (26%), Positives = 101/203 (49%), Gaps = 17/203 (8%) Query: 191 VFSFVLGIVLSLFATRLS----RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246 + SF+LG+ +++F + +HF KT A Y+S LI G P LV I + + + Sbjct: 44 IISFILGLFIAVFVALIKIAPPKHFIHKTLLAGVNFYVS--LIRGTPLLVQIVVVF---Y 98 Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306 P LG + + P + IA S A+ +E +R+ ++VP+ Q +++++LGL Sbjct: 99 GLPALGVY-------IDPIPAGI-IAFSFNVGAYASETLRASFLSVPKDQWDSSLSLGLN 150 Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 + + V+ QA++ P L++ +++L K +SLA V A++ + N + + I Sbjct: 151 YLQTFWHVIFFQALKVATPSLSNTFISLFKETSLASVVTIAEVFRIAQQKANASYDFLPI 210 Query: 367 ILIWMFIYLSLSIMIALFMNRLN 389 L IY +++ + R+ Sbjct: 211 YLEAALIYWLFCLVLEVIQKRVE 233 >gi|149203650|ref|ZP_01880619.1| putative amino acid ABC transporter permease protein [Roseovarius sp. TM1035] gi|149142767|gb|EDM30809.1| putative amino acid ABC transporter permease protein [Roseovarius sp. TM1035] Length = 217 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 41/121 (33%), Positives = 64/121 (52%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I LS YT+A+ AEIVR G+ AVP AA +LGLT + R ++LP A R +P Sbjct: 93 IVLSLYTSAYCAEIVRGGIDAVPEITRRAARSLGLTWGQDMRYIVLPLATRVALPSWIGL 152 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 L ++K+S+L V +L+ +I + + + ++LI Y +S +A F L Sbjct: 153 ALGVMKDSALVYVVQVTELLKSTQILITRLQEPLFLLLICGAFYFVISFPLARFGGYLEK 212 Query: 391 K 391 + Sbjct: 213 R 213 >gi|251788515|ref|YP_003003236.1| polar amino acid ABC transporter inner membrane subunit [Dickeya zeae Ech1591] gi|247537136|gb|ACT05757.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya zeae Ech1591] Length = 221 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 36/104 (34%), Positives = 59/104 (56%) Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 A+ EI+R+G+ P+GQ EAA LGL+ + V+LP A++ I P L SQ + ++ Sbjct: 102 GAYSTEIIRAGIQVTPKGQWEAARVLGLSRAQTFTRVILPPALQRIYPALVSQCIIVMLG 161 Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 SS+ V F +L I ++T + E+ L+ YL LS+++ Sbjct: 162 SSVVSQVSFEELTFAANLIQSRTFLSFEVYLVTTLCYLVLSMLM 205 >gi|195973407|gb|ACG63350.1| allantoate transport membrane protein [Klebsiella oxytoca M5al] Length = 221 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 38/102 (37%), Positives = 57/102 (55%) Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 A+ EIVR+G+ P+GQ EA LGLT + V+LP A++ I P L SQ + ++ Sbjct: 102 GAYSTEIVRAGIQVTPKGQWEAGRVLGLTRTQTFIQVILPPALQRIYPALVSQCIIVMLG 161 Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379 SS+ V + L I ++T + E+ L+ IYL+LSI Sbjct: 162 SSVGCQVSYEKLTFAAHLIQSRTFLSFEVYLVTTGIYLALSI 203 >gi|154174776|ref|YP_001408465.1| glutamineABC transporter membrane-spanning permease [Campylobacter curvus 525.92] gi|112802739|gb|EAU00083.1| ABC transporter membrane-spanning permease - glutamine transport [Campylobacter curvus 525.92] Length = 217 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 54/174 (31%), Positives = 84/174 (48%), Gaps = 26/174 (14%) Query: 220 PLLYISTFLIFGLPTL-VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTA 278 PLL FL +GLP L V I F V+G F+GGS Sbjct: 64 PLLIQLFFLYYGLPKLGVQIG-----SFTCAVIG-LTFLGGS------------------ 99 Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338 ++AE R G AV + Q+EA +++GL+ + R V++PQA +P +++ + LLK + Sbjct: 100 -YMAESFRLGFEAVRKSQIEAGLSIGLSQNQLLRYVIVPQAFGVSLPSISANVIFLLKET 158 Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 S+ V ADLV V II + E + + + YL L + I+L + L ++ Sbjct: 159 SIVSIVALADLVYVAKDIIGLYYKTDEALFMLVVSYLILILPISLALTWLEKRM 212 >gi|296159044|ref|ZP_06841871.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. Ch1-1] gi|295890605|gb|EFG70396.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. Ch1-1] Length = 229 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 47/164 (28%), Positives = 85/164 (51%), Gaps = 15/164 (9%) Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY---QLHFDK 248 F+FVLG++ + A +LS++ + + +Y T L+ G+P LVL+ L + Q+ + Sbjct: 27 FAFVLGLLGA--AAKLSKN---RISNGVGTVY--TTLVRGVPDLVLMLLLFYSIQIWLNN 79 Query: 249 PVLGQFNFIGGSTVSPE-FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307 + +G + + F++ L A+ E R +AVPRGQ+EA A G+T Sbjct: 80 LT----DLLGWDQIDIDPFVAGVAVLGFIYGAYFTETFRGAFLAVPRGQLEAGAAYGMTG 135 Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 + V+ PQ MR +P + + + ++K ++L +G AD+V Sbjct: 136 WQVFSRVMFPQMMRFALPGIGNNWQVMVKATALVSIIGLADVVK 179 >gi|168485720|ref|ZP_02710228.1| ABC transporter membrane-spanning permease - glutamine transport [Streptococcus pneumoniae CDC1087-00] gi|168490507|ref|ZP_02714650.1| ABC transporter membrane-spanning permease - glutamine transport [Streptococcus pneumoniae CDC0288-04] gi|221231430|ref|YP_002510582.1| putative amino acid ABC transporter, permease protein [Streptococcus pneumoniae ATCC 700669] gi|225858442|ref|YP_002739952.1| ABC transporter membrane-spanning permease - glutamine transport [Streptococcus pneumoniae 70585] gi|298229828|ref|ZP_06963509.1| ABC transporter membrane-spanning permease - glutamine transport [Streptococcus pneumoniae str. Canada MDR_19F] gi|298255468|ref|ZP_06979054.1| ABC transporter membrane-spanning permease - glutamine transport [Streptococcus pneumoniae str. Canada MDR_19A] gi|298502399|ref|YP_003724339.1| glutamine ABC superfamily transporter membrane protein [Streptococcus pneumoniae TCH8431/19A] gi|183571195|gb|EDT91723.1| ABC transporter membrane-spanning permease - glutamine transport [Streptococcus pneumoniae CDC1087-00] gi|183574810|gb|EDT95338.1| ABC transporter membrane-spanning permease - glutamine transport [Streptococcus pneumoniae CDC0288-04] gi|220673890|emb|CAR68396.1| putative amino acid ABC transporter, permease protein [Streptococcus pneumoniae ATCC 700669] gi|225721460|gb|ACO17314.1| ABC transporter membrane-spanning permease - glutamine transport [Streptococcus pneumoniae 70585] gi|298237994|gb|ADI69125.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus pneumoniae TCH8431/19A] Length = 219 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 28/73 (38%), Positives = 50/73 (68%) Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 A + +T+A +AEI+R GL AV +GQ +A ++ G T + ++LPQA R ++P + SQ+ Sbjct: 90 AFTLFTSAALAEIIRGGLNAVDKGQYKAGMSQGFTSAQILYYIILPQASRKMLPAIISQF 149 Query: 332 LNLLKNSSLAVAV 344 + ++K++SL +V Sbjct: 150 VTVIKDTSLLYSV 162 Score = 37.0 bits (84), Expect = 5.3, Method: Compositional matrix adjust. Identities = 20/61 (32%), Positives = 35/61 (57%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 I GF T +++ +I +TIIGT++ R N ++ I +Y+E N+P L+ IF + Sbjct: 16 IFKGFGLTLYISLIAIILSTIIGTVLAVMRNGKNPILRIISSIYIEFVHNVPNLLWIFTI 75 Query: 149 Y 149 + Sbjct: 76 F 76 >gi|254245536|ref|ZP_04938857.1| Amino acid permease [Burkholderia cenocepacia PC184] gi|124870312|gb|EAY62028.1| Amino acid permease [Burkholderia cenocepacia PC184] Length = 230 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 64/233 (27%), Positives = 108/233 (46%), Gaps = 25/233 (10%) Query: 177 SFPTLTMDT--NAKIFVFSFVLG----IVLSLFATRLSRH---FHEKTGKALPLL---YI 224 S P L K V S V G +VL++ R S F AL L Y+ Sbjct: 10 SLPVLAQGAVLTVKFAVLSMVFGLLGAVVLAMMGIRQSEALDGFERIWVNALAWLARAYV 69 Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284 S L+ G P LV I + +++ P LG ++ P + IALS AA+++E Sbjct: 70 S--LMRGTPLLVQI---FVIYYGLPSLG-------ISLDPTPAGV-IALSANVAAYMSES 116 Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344 +R + + RGQ AA +LGL+ + R V+ PQA+R +P L++ ++L+K++SL + Sbjct: 117 MRGAINGIARGQWLAAYSLGLSWGQTLRYVIGPQALRIAVPSLSNSLISLIKDTSLVSVI 176 Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397 +L+ +I T Q + + L +Y L ++ +++L + Sbjct: 177 TVTELLRSAQEVIAATYQPLPLCLAAAAVYWVLCQILEWVQRWYEKRLSLPSR 229 >gi|158424907|ref|YP_001526199.1| amino acid ABC transporter permease protein [Azorhizobium caulinodans ORS 571] gi|158331796|dbj|BAF89281.1| amino acid ABC transporter permease protein [Azorhizobium caulinodans ORS 571] Length = 227 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 37/113 (32%), Positives = 66/113 (58%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +AL A+ +EIVR+GL ++ + Q+EAA LGL+ + V++ A+ + P LTSQ Sbjct: 95 LALVVNVGAYTSEIVRAGLESIHKSQLEAAECLGLSRPQTYWHVIVRPAIERVYPALTSQ 154 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 Y+ L+ SS+ + +L +V I + T ++ E ++ +YL+LS ++ L Sbjct: 155 YVLLMLASSITSQISAEELTAVANRIQSDTFRSFETYIVVGVLYLALSFVVRL 207 >gi|153215601|ref|ZP_01950046.1| arginine ABC transporter, permease protein [Vibrio cholerae 1587] gi|124114689|gb|EAY33509.1| arginine ABC transporter, permease protein [Vibrio cholerae 1587] Length = 222 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 61/217 (28%), Positives = 106/217 (48%), Gaps = 22/217 (10%) Query: 183 MDTNAKIFVFSFVLGIVLSLFATR---LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239 + T+ ++ S ++G +LSL T + H +A+ L+ G P LV I Sbjct: 13 LGTSLQLTAASLLVGCILSLLMTVSLVMRTHVVHWFSRAVITLFT------GTPLLVQIF 66 Query: 240 LKYQLHFDKPVLGQFNFIGGSTV-----SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294 L Y P GQF +I S + P F ++ +AL+ TAA+ ++ + A+P Sbjct: 67 LVYY----GP--GQFEWIRESVLWVWLSQPWFCAM-LALALNTAAYSTQLFKGAFNAIPS 119 Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354 GQ +A ALG+ ++ AT VLLP A+R +P +++ + + K +SLA + DL+ Sbjct: 120 GQWQACRALGM-NKIATLRVLLPYALRRAVPAYSNEVILVFKGTSLASTITIMDLMGYAQ 178 Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 I QT + + I YL+++ ++ L ++ K Sbjct: 179 RINAQTYDTLTVFGIAGAFYLAVNGILTLIFRQIEKK 215 >gi|15890305|ref|NP_355977.1| ABC transporter, membrane spanning protein (amino acid) [Agrobacterium tumefaciens str. C58] gi|15158506|gb|AAK88762.1| ABC transporter, membrane spanning protein (amino acid) [Agrobacterium tumefaciens str. C58] gi|325062202|gb|ADY65892.1| amino acid ABC transporter, membrane spanning protein [Agrobacterium sp. H13-3] Length = 234 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 35/115 (30%), Positives = 68/115 (59%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I ++ AA+ EI+R+G+ AV + Q+EA ALG T + R V++ A+ + P L SQ Sbjct: 95 IGMTINLAAYSTEIIRAGIEAVHKSQIEAGEALGFTKYQIYRHVIIVPAIAKVYPSLCSQ 154 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 ++ ++ SS+ A+ +L + + +QT ++ E+ ++ IYL+L++ + L + Sbjct: 155 FVLMMLASSICSAISTHELAAAAAFVESQTYRSFEVYIVVTLIYLALALSLRLIL 209 >gi|315633804|ref|ZP_07889093.1| arginine ABC superfamily ATP binding cassette transporter, membrane protein [Aggregatibacter segnis ATCC 33393] gi|315477054|gb|EFU67797.1| arginine ABC superfamily ATP binding cassette transporter, membrane protein [Aggregatibacter segnis ATCC 33393] Length = 220 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 62/210 (29%), Positives = 101/210 (48%), Gaps = 13/210 (6%) Query: 191 VFSFVLGIVLS-LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249 V S VLG+ L LFA + F GK LL L+ GLP ++++ L Y F Sbjct: 21 VCSLVLGLFLGMLFAVLEANRF---VGKPTALL---VALLRGLPEILVVLLVY---FGSS 71 Query: 250 VLGQFNFIGGSTVS-PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308 L + G V F ALS AA+ ++ +R + A+ +GQ E+ ALGL+ Sbjct: 72 EL--VELLTGEYVEFGAFGCGVFALSLIFAAYASQTLRGAIQAIAKGQWESGTALGLSKG 129 Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368 +++PQ R +P L++Q+L LLK+++L +G DL+ I T Q Sbjct: 130 YTFLRIIMPQVWRHALPGLSNQWLVLLKDTALISLIGVDDLMRQAQLINTNTHQPFTWYG 189 Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 I IYL ++++ + + +L + E++ Sbjct: 190 IAALIYLLVTLVSQVGIRKLELRFTRFERE 219 >gi|288959823|ref|YP_003450163.1| hypothetical protein AZL_a00880 [Azospirillum sp. B510] gi|288912131|dbj|BAI73619.1| hypothetical protein AZL_a00880 [Azospirillum sp. B510] Length = 263 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 49/167 (29%), Positives = 80/167 (47%), Gaps = 12/167 (7%) Query: 233 PTLVLI-ALKYQLHFDKPVLGQFNFIGGSTVS-PEFMSLYIALSCYTAAFIAEIVRSGLI 290 P LVLI A Y L F+ IGG V P+++ + L+ +A IAEI R + Sbjct: 104 PHLVLIFATTYALPFEI-------AIGGWHVPFPDWLKAVVGLAVPASAHIAEIARGAIQ 156 Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 ++P Q EAA +LG + R ++LPQ +R +P + Y ++ S+LA VG +L+ Sbjct: 157 SIPAAQWEAAGSLGFGRLQTLRWIILPQGLRRSLPAWMNLYASIAMGSALASLVGVGELL 216 Query: 351 SV---GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394 T + +T I + L + + + I+ RL + A+ Sbjct: 217 HAATDASTAVRRTDFTIAVYLTVLVAFFAYCYPISRLTQRLERRFAV 263 >gi|222082456|ref|YP_002541821.1| amino acid ABC transporter [Agrobacterium radiobacter K84] gi|221727135|gb|ACM30224.1| amino acid ABC transporter [Agrobacterium radiobacter K84] Length = 213 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 50/153 (32%), Positives = 81/153 (52%), Gaps = 11/153 (7%) Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290 G+P LV + L Y L PV+G N P ++ I LS TAA+ AE +R G Sbjct: 58 GVPLLVQLLLIYNLL---PVIG-INV-------PSIVAAIIGLSLCTAAYQAENLRGGFA 106 Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 +VP G +E+A +GL+ R+ R + +P A+R P L ++ + +LK SSL VG +L Sbjct: 107 SVPTGLVESAEMVGLSPRQIFRRIKVPIALRLTFPALVNEAILILKASSLVSVVGIVELT 166 Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383 + + T +++ IYL+++ ++AL Sbjct: 167 RMAQDLAGSTFLPLQLFASAGLIYLAINWIVAL 199 >gi|171780125|ref|ZP_02921029.1| hypothetical protein STRINF_01913 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] gi|171281473|gb|EDT46908.1| hypothetical protein STRINF_01913 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] Length = 215 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 28/73 (38%), Positives = 49/73 (67%) Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 A + +T+A +AEI+R GL V GQ EA +A G+T+ + ++ PQA R ++P + SQ+ Sbjct: 86 AFTVFTSAALAEIIRGGLNGVDHGQTEAGLAQGMTNFQIFIYIVFPQAFRKMLPAIISQF 145 Query: 332 LNLLKNSSLAVAV 344 + ++K++SL +V Sbjct: 146 VTVIKDTSLLYSV 158 Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust. Identities = 20/61 (32%), Positives = 37/61 (60%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 IL G T +++F ++ +T+IGT++ R N ++ I +Y+E RN+P L+ IF + Sbjct: 12 ILQGLWLTIYISFISIVLSTLIGTVLAVMRNGKNPVLHLISSIYIEFVRNVPNLLWIFII 71 Query: 149 Y 149 + Sbjct: 72 F 72 >gi|167841846|ref|ZP_02468530.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia thailandensis MSMB43] Length = 225 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 39/139 (28%), Positives = 75/139 (53%), Gaps = 2/139 (1%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G T+SP F ++ I + A++ EI R+G +V R ++EAA LG + + R V+ P Sbjct: 85 GVTLSP-FSAVLIGATFNAGAYLCEIQRAGFASVRRAEIEAAEVLGFSTSQIVRYVIFPH 143 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378 ++ + PPL++Q++ + +S+A G +L + +QT +IE + +Y++++ Sbjct: 144 VLKVMFPPLSNQFIMMTLGTSMASVFGVEELTGRTFNLSSQTYLSIEAFSVAAVMYIAIT 203 Query: 379 IMIALFMNRLNAKIALKEK 397 +IA F + A + K Sbjct: 204 -LIATFALAAFGRYACRAK 221 >gi|255527438|ref|ZP_05394311.1| polar amino acid ABC transporter, inner membrane subunit [Clostridium carboxidivorans P7] gi|296187467|ref|ZP_06855862.1| ABC transporter, permease protein [Clostridium carboxidivorans P7] gi|255508884|gb|EET85251.1| polar amino acid ABC transporter, inner membrane subunit [Clostridium carboxidivorans P7] gi|296047989|gb|EFG87428.1| ABC transporter, permease protein [Clostridium carboxidivorans P7] Length = 237 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 37/119 (31%), Positives = 68/119 (57%), Gaps = 4/119 (3%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I + + AFI+EI+RS ++V GQ EAA+++G+ + + R +++PQA + +P L + Sbjct: 102 ITFALNSGAFISEIMRSAYLSVDAGQSEAALSIGMNNVQCLRRIIIPQAFKICLPNLGNI 161 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTG---QAIEIILIWMFIYLSLSIMIALFMN 386 ++LLK +S +G D++ +I G + +E L IY +SI+I F++ Sbjct: 162 IISLLKETSYVFTIGVVDILG-KAKLIGSDGYGVRQLEAFLAVALIYWVISIVIEQFIS 219 >gi|229591026|ref|YP_002873145.1| putative inner membrane component of binding-protein-dependent amino acid transport system [Pseudomonas fluorescens SBW25] gi|229362892|emb|CAY49802.1| putative inner membrane component of binding-protein-dependent amino acid transport system [Pseudomonas fluorescens SBW25] Length = 222 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 36/96 (37%), Positives = 55/96 (57%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I + +A+ AE R+G+IAV +GQ EAA ALG+ R V+LPQA R +PP + Sbjct: 95 IGMGIAYSAYQAENFRTGIIAVEQGQREAAEALGMRSTLMMRRVILPQAFRIALPPYGNT 154 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 + +LK+SSL + A++ G I + T Q + + Sbjct: 155 LVMMLKDSSLVSTITVAEMTRQGQLIASSTFQNMTV 190 >gi|170761003|ref|YP_001786791.1| His/Glu/Gln/Arg/opine ABC transporter permease [Clostridium botulinum A3 str. Loch Maree] gi|169407992|gb|ACA56403.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Clostridium botulinum A3 str. Loch Maree] Length = 221 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 25/85 (29%), Positives = 58/85 (68%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 I L +A+++E +R + +V +GQ+EA++++G+T ++ R ++ PQA R +P L++ Sbjct: 96 IGLGFNASAYMSETLRGAISSVDKGQIEASLSIGMTSIQSMRRIVFPQAARVALPALSNS 155 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGT 355 +++++K S+LA +G ++++V + Sbjct: 156 FVDIIKGSALAFTLGVVEIMAVAQS 180 >gi|134102703|ref|YP_001108364.1| amino acid ABC transporter, permease protein [Saccharopolyspora erythraea NRRL 2338] gi|133915326|emb|CAM05439.1| amino acid ABC transporter, permease protein [Saccharopolyspora erythraea NRRL 2338] Length = 220 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 40/133 (30%), Positives = 73/133 (54%), Gaps = 2/133 (1%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G +SP ++ + L + A ++AE+ R+G+ VP GQ EAA AL L R+ V+LPQ Sbjct: 82 GIQMSP-LLTGVVGLGLHYATYVAEVYRAGIDGVPAGQWEAATALNLPTRRVWTDVILPQ 140 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378 A+ IP L + + L K+ VA+ + +V + T + E I + +YL+++ Sbjct: 141 AIPRSIPALGNYLIALFKDVPQLVAITVLEPFTVAREVTADTFRPFEAITLAGLLYLAVT 200 Query: 379 IMIALFMNRLNAK 391 ++++ ++ RL + Sbjct: 201 LVMS-YLGRLAER 212 >gi|238795812|ref|ZP_04639325.1| Arginine transport system permease protein artQ [Yersinia mollaretii ATCC 43969] gi|238720275|gb|EEQ12078.1| Arginine transport system permease protein artQ [Yersinia mollaretii ATCC 43969] Length = 238 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 62/204 (30%), Positives = 106/204 (51%), Gaps = 18/204 (8%) Query: 191 VFSFVLGIVLS-LFA----TRLSRHFHEKTG-----KALPLLYISTFLIFGLPTLVLI-- 238 V + LG+VL+ LFA +RL + TG + LP + + F+ FG L+++ Sbjct: 19 VCALALGLVLAMLFAVCESSRLKVVSYLTTGWVTLLRGLPEILVVLFIYFGSSQLLMMLS 78 Query: 239 -ALKYQLH-FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296 L+ F+ P+ + N I VSP F+ IAL+ +A+ ++ +R L AVP GQ Sbjct: 79 DGFTLNLYLFELPI--KLN-IDDFEVSP-FLCGVIALALLYSAYASQTLRGALKAVPIGQ 134 Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356 E+ ALGL+ +++PQ R +P L +Q+L LLK+++L + DL+ +I Sbjct: 135 WESGQALGLSQAAIFFRLIMPQMWRHALPGLGNQWLVLLKDTALVSLISVNDLMLQTKSI 194 Query: 357 INQTGQAIEIILIWMFIYLSLSIM 380 +T + +I IYL ++++ Sbjct: 195 ATRTQEPFTWYVIAAAIYLVVTLL 218 >gi|327459025|gb|EGF05373.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK1057] Length = 225 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 47/185 (25%), Positives = 88/185 (47%), Gaps = 23/185 (12%) Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY---QLHFD 247 + S +LG + + T H K + L Y+ I +P LVL+ L Y +F+ Sbjct: 34 IISLILGTIFGIIMTS-----HSKVVRFLSRAYLE--FIRVMPQLVLLFLVYFGLARNFN 86 Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307 + G+ +S I S + A + ++VR + ++P+ Q E+ ALGL+ Sbjct: 87 INISGE-------------LSAIIVFSLWGTAEMGDLVRGAITSLPKHQFESGQALGLSQ 133 Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367 R+ +++PQ +R ++P + ++K +SL V +G ++V VG II+ +I Sbjct: 134 RQLYVYIIIPQVLRRLLPQAINLITRMIKTTSLIVLIGVIEVVKVGQQIIDSNRLSIPSA 193 Query: 368 LIWMF 372 W++ Sbjct: 194 AFWIY 198 >gi|309390081|gb|ADO77961.1| amino acid ABC transporter membrane protein 1, PAAT family [Halanaerobium praevalens DSM 2228] Length = 228 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 39/133 (29%), Positives = 73/133 (54%), Gaps = 7/133 (5%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + I + +AA+ ++I R + +V QM AA++LG++ KA ++ PQA+R +P Sbjct: 87 FKAAVIGIGLRSAAYQSQIYRGAIQSVGGSQMNAALSLGMSKMKAFFYIISPQAIRIALP 146 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 P+ ++ +LK++SLA +G +L+ G I + M IYL+++ + + Sbjct: 147 PVANESAIVLKDTSLAFTIGVVELLRQGEYFIATANRP-------MLIYLTIAAIYFVLT 199 Query: 386 NRLNAKIALKEKK 398 +N ++L EKK Sbjct: 200 TIVNGALSLFEKK 212 >gi|163816015|ref|ZP_02207385.1| hypothetical protein COPEUT_02195 [Coprococcus eutactus ATCC 27759] gi|158448825|gb|EDP25820.1| hypothetical protein COPEUT_02195 [Coprococcus eutactus ATCC 27759] gi|295093671|emb|CBK82762.1| amino acid ABC transporter membrane protein, PAAT family (TC 3.A.1.3.-) [Coprococcus sp. ART55/1] Length = 228 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 48/182 (26%), Positives = 92/182 (50%), Gaps = 16/182 (8%) Query: 220 PLLYISTFLIF---GLPTLVLIALKY---QLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273 PL Y+ F+++ G P ++ + + Y L F PV G GG V+ +S + Sbjct: 50 PLSYLMKFIVWIVRGTPLMIQLLIIYYFPGLVFHNPVWGGGE--GGRFVAAS-VSFIVNY 106 Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333 +CY +EI R G+ +P GQ EA + LG+T ++ V L Q ++ I+P ++++ + Sbjct: 107 ACY----FSEIYRGGIQGIPVGQEEAGLVLGMTPKQIFFKVKLLQMIKKIVPAMSNEIIT 162 Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQT---GQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 L+K++SLA + +++ G + + AI + F YL + ++ + + +L Sbjct: 163 LVKDTSLARIIALQEIIWAGQAFMKGSQGISGAIWPLFFCAFYYLIWNGVLTVLLGKLEK 222 Query: 391 KI 392 K+ Sbjct: 223 KL 224 >gi|83643771|ref|YP_432206.1| amino acid ABC transporter permease [Hahella chejuensis KCTC 2396] gi|83631814|gb|ABC27781.1| ABC-type amino acid transport system, permease component [Hahella chejuensis KCTC 2396] Length = 225 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 37/133 (27%), Positives = 75/133 (56%), Gaps = 1/133 (0%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G ++SP + +AL + A+++E+ RSG+ V +GQ EAA AL L+ R V+LPQ Sbjct: 85 GVSMSP-MTTGVLALGAHYGAYLSEVFRSGIDGVEKGQWEAARALNLSQLTTYRDVILPQ 143 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378 A+R++IP + + + K + A+ +++ + ++ + +E + +YL+ S Sbjct: 144 ALRAMIPATGNYIIAMFKETPQLSAITLLEMLQTAKILGSENFRYLEPFTLVGLLYLAFS 203 Query: 379 IMIALFMNRLNAK 391 I+ AL ++++ + Sbjct: 204 IVAALGVHQVERR 216 >gi|119387646|ref|YP_918680.1| polar amino acid ABC transporter, inner membrane subunit [Paracoccus denitrificans PD1222] gi|119378221|gb|ABL72984.1| amino acid ABC transporter membrane protein 1, PAAT family [Paracoccus denitrificans PD1222] Length = 251 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 39/125 (31%), Positives = 71/125 (56%), Gaps = 1/125 (0%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G +S EF ++ +A+ +++ EI+R+G+ +V +GQ EA+ LGLT ++ LV+LP Sbjct: 108 GFKLSAEFCAV-LAIVINVSSYTCEIMRAGIESVRKGQREASDCLGLTWLQSLFLVVLPP 166 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378 A + P L SQ++ ++ +SL + +L S I + T ++ EI + IY+ L+ Sbjct: 167 ATERVYPALVSQFILIMLATSLVSQISAEELTSTAARIDSMTFRSFEIYTVVALIYIGLA 226 Query: 379 IMIAL 383 + L Sbjct: 227 FVFRL 231 Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 31/81 (38%), Positives = 45/81 (55%), Gaps = 4/81 (4%) Query: 79 YTSD----SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVE 134 YT D + Y +L G V T L+ +I ++GTL+ GR + +KL+ IC +YVE Sbjct: 27 YTFDFSFLAEYWPQLLKGLVQTAQLSLLSIIFGFLLGTLLAIGRTAQSKLLRRICAIYVE 86 Query: 135 VFRNIPPLVVIFFLYKSVLSV 155 RN P LV +F +Y + SV Sbjct: 87 AIRNTPLLVQMFMIYFGLASV 107 >gi|309379287|emb|CBX22060.1| unnamed protein product [Neisseria lactamica Y92-1009] Length = 222 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 28/85 (32%), Positives = 53/85 (62%) Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335 + A + ++VR L ++ + Q+E+ +ALGL+ R+ R + LPQ++R ++P + + ++ Sbjct: 99 WGIAEMGDLVRGALESIEKHQVESGLALGLSRRQVFRYIELPQSVRRVLPGAVNLFTRMI 158 Query: 336 KNSSLAVAVGFADLVSVGGTIINQT 360 K SSLA +G ++V VG II + Sbjct: 159 KTSSLASLIGVIEVVKVGQQIIENS 183 >gi|238792193|ref|ZP_04635828.1| Polar amino acid ABC transporter, inner membrane subunit [Yersinia intermedia ATCC 29909] gi|238728430|gb|EEQ19949.1| Polar amino acid ABC transporter, inner membrane subunit [Yersinia intermedia ATCC 29909] Length = 230 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 46/143 (32%), Positives = 74/143 (51%), Gaps = 10/143 (6%) Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVL--GQFNFIG-GSTVSPEFMSLYIALSCYTAAFIA 282 T L+ G+P LV++ L L F +L G + +G G F+S +A+ A+ Sbjct: 53 TTLVRGIPELVIMLL---LFFGGEMLVNGFLSLLGVGPVRFNTFISGVLAIGIVFGAYYT 109 Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342 E R V RGQ+EAAIA G++ + R ++LPQ + IP + + +L L+K S+L Sbjct: 110 ETFRGAFQTVDRGQLEAAIAYGMSPAQVFRRIMLPQMLSFAIPGINNNWLGLMKASALIS 169 Query: 343 AVGFADLVSVGGTIINQTGQAIE 365 +G D+V + Q G+A + Sbjct: 170 ILGLEDMV----WLAEQAGRATQ 188 >gi|107023342|ref|YP_621669.1| amino acid ABC transporter permease [Burkholderia cenocepacia AU 1054] gi|116690425|ref|YP_836048.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia cenocepacia HI2424] gi|170733745|ref|YP_001765692.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia cenocepacia MC0-3] gi|206560949|ref|YP_002231714.1| histidine transport system permease [Burkholderia cenocepacia J2315] gi|105893531|gb|ABF76696.1| amino acid ABC transporter membrane protein 1, PAAT family [Burkholderia cenocepacia AU 1054] gi|116648514|gb|ABK09155.1| amino acid ABC transporter membrane protein 1, PAAT family [Burkholderia cenocepacia HI2424] gi|169816987|gb|ACA91570.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia cenocepacia MC0-3] gi|198036991|emb|CAR52912.1| histidine transport system permease protein [Burkholderia cenocepacia J2315] Length = 229 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 40/133 (30%), Positives = 69/133 (51%), Gaps = 10/133 (7%) Query: 224 ISTFLIFGLPTLVLI-----ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTA 278 + T LI G+P LVL+ +L+ L+ LG + P F++ + L Sbjct: 52 VYTTLIRGVPDLVLMLLLFYSLQIWLNMATDALGWDQI----DIDP-FLAGVLVLGFIYG 106 Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338 A+ E R ++VPRGQ+EA A G+T+ + ++ PQ MR +P + + + L+K++ Sbjct: 107 AYFTETFRGAFLSVPRGQLEAGSAYGMTNWQVFTRIMFPQMMRFALPGIGNNWQVLVKST 166 Query: 339 SLAVAVGFADLVS 351 +L +G AD+V Sbjct: 167 ALVSIIGLADVVK 179 >gi|325293282|ref|YP_004279146.1| Inner membrane arginine ABC transporter permease protein [Agrobacterium sp. H13-3] gi|325061135|gb|ADY64826.1| Inner membrane arginine ABC transporter permease protein [Agrobacterium sp. H13-3] Length = 267 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 51/172 (29%), Positives = 88/172 (51%), Gaps = 11/172 (6%) Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV-LIALKYQLHFDKPVLGQF 254 +G+V+ F L+ EK+ + +Y + F GLP L+ L + Y + + Sbjct: 66 VGLVIG-FLIALAAQSEEKSLRLAAGVYTTIFR--GLPELLTLFIVYYGIQMLLQSAAGY 122 Query: 255 NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLV 314 I G F++ +ALS +++ +E++ S A+P+GQ EA ALGL+ LV Sbjct: 123 VGITGPVEINAFVAGMVALSVVFSSYSSEVLLSAFKAIPKGQYEAGHALGLSRGHTMVLV 182 Query: 315 LLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 ++PQ +R +P +T+ ++ LLK++S +G AD I+ QTG A + Sbjct: 183 IIPQLVRIALPGMTNLWVILLKDTSYVSIIGLAD-------IVRQTGIAARV 227 >gi|302560483|ref|ZP_07312825.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces griseoflavus Tu4000] gi|302478101|gb|EFL41194.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces griseoflavus Tu4000] Length = 216 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 52/206 (25%), Positives = 94/206 (45%), Gaps = 30/206 (14%) Query: 193 SFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPTLVLIALKYQLHF 246 SF LG+V +L +R G + PLL FL + LP ++ + F Sbjct: 33 SFALGLVWALLMRVPTRWVTWPVGAVTEFVRNTPLLVQLFFLFYVLP-------EWGITF 85 Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306 G F A+ + + + ++ R+G+ AVP GQ EAA AL L Sbjct: 86 SALTTGVF-----------------AIGLHYSTYTMQVYRAGIEAVPVGQWEAATALNLP 128 Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 R+ V+LPQA+R ++P L + +++LK++ L +A+ +++ Q Q E Sbjct: 129 LRRTWTAVILPQAVRRVVPALGNYVISMLKDTPLLMAITVLEMLGEARLFSQQNFQFTEP 188 Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKI 392 + + F ++ +S + +L + L ++ Sbjct: 189 LTVIGFAFIVISYLASLALRALERRL 214 >gi|91782440|ref|YP_557646.1| ABC basic amino acid transporter, inner membrane subunit [Burkholderia xenovorans LB400] gi|91686394|gb|ABE29594.1| amino acid ABC transporter membrane protein 1, PAAT family [Burkholderia xenovorans LB400] Length = 229 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 47/164 (28%), Positives = 85/164 (51%), Gaps = 15/164 (9%) Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY---QLHFDK 248 F+FVLG++ + A +LS++ + + +Y T L+ G+P LVL+ L + Q+ + Sbjct: 27 FAFVLGLLGA--AAKLSKN---RISNGVGTVY--TTLVRGVPDLVLMLLLFYSIQIWLNN 79 Query: 249 PVLGQFNFIGGSTVSPE-FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307 + +G + + F++ L A+ E R +AVPRGQ+EA A G+T Sbjct: 80 LT----DLLGWDQIDIDPFVAGVAVLGFIYGAYFTETFRGAFLAVPRGQLEAGAAYGMTG 135 Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351 + V+ PQ MR +P + + + ++K ++L +G AD+V Sbjct: 136 WQVFSRVMFPQMMRFALPGIGNNWQVMVKATALVSIIGLADVVK 179 >gi|163739218|ref|ZP_02146630.1| polar amino acid uptake family ABC transporter, permease protein [Phaeobacter gallaeciensis BS107] gi|161387618|gb|EDQ11975.1| polar amino acid uptake family ABC transporter, permease protein [Phaeobacter gallaeciensis BS107] Length = 258 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 45/173 (26%), Positives = 84/173 (48%), Gaps = 6/173 (3%) Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY----IALSCYTAAFIAE 283 +I G P L+ I L Y + + QF +I S + P + +AL+ A + E Sbjct: 88 VIRGTPLLLQIWLLY--YGLGSLFPQFPWIRSSELWPYLRQAWPYAVLALTLSYAGYEGE 145 Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343 ++R V +GQ+EAA A G+ R + LPQA+R+++P L + + LK + L Sbjct: 146 VMRGAFSGVAKGQLEAAKAYGMPRLTMFRRIWLPQAVRNVLPTLGGETILQLKATPLVAT 205 Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 + D+ +V + + T E +L+ +Y++++ +I L R ++ + Sbjct: 206 ITVLDIYAVSSRVRSDTFIVYEPLLLLALVYMAIAGVITLAFKRFEDRVPQRR 258 >gi|325523119|gb|EGD01520.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia sp. TJI49] Length = 240 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 49/181 (27%), Positives = 88/181 (48%), Gaps = 9/181 (4%) Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL----GQFNFIGGSTVSPEFMSLYIA 272 +A LY + F G+P L++I Y +F L G++ + G P F+ +A Sbjct: 55 RAAGDLYTTVFR--GVPELLVI---YLFYFGGSSLVTMVGRWFGVDGFIGLPPFLIGALA 109 Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 + + A+ AE+ R ++AV RG++EAA A+G+ R +L+PQ +R +P + + + Sbjct: 110 VGMISGAYQAEVYRGAVLAVSRGELEAARAIGMPTATLMRRILIPQVLRYALPGIGNVWQ 169 Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 LK+S+L G A+L+ T Q + +YL ++ M N +++ Sbjct: 170 LSLKDSALISVTGLAELLRASQVAAGSTHQYFVFFIAGGTLYLLMTAMSNRIFNHAESRV 229 Query: 393 A 393 A Sbjct: 230 A 230 >gi|300309584|ref|YP_003773676.1| amino acid ABC transporter permease [Herbaspirillum seropedicae SmR1] gi|300072369|gb|ADJ61768.1| ABC-type amino acid transport system, permease component protein [Herbaspirillum seropedicae SmR1] Length = 215 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 47/136 (34%), Positives = 72/136 (52%), Gaps = 11/136 (8%) Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287 LI G P LVL+ + F P L G TV + A+ YT+AF+ EI R Sbjct: 55 LIQGTPLLVLMGV----CFYGPALA-----GVGTVE-ALPAAATAMLIYTSAFLGEIWRG 104 Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA-VAVGF 346 + +V + Q EAA +GL+ + R+++LPQA+R PP + ++KN+S+A + +GF Sbjct: 105 CIQSVHKSQWEAAECIGLSRWQRMRMIVLPQALRMATPPTVGFAVQVIKNTSVASLVIGF 164 Query: 347 ADLVSVGGTIINQTGQ 362 A+L + N T Q Sbjct: 165 AELSYNAKVLNNSTFQ 180 >gi|291286085|ref|YP_003502901.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC [Denitrovibrio acetiphilus DSM 12809] gi|290883245|gb|ADD66945.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC [Denitrovibrio acetiphilus DSM 12809] Length = 222 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 31/86 (36%), Positives = 55/86 (63%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324 +F + ++A+ A+ AE+VR ++AVP+GQ EAA++LGL+ K ++ PQA+ ++ Sbjct: 86 KFTAGFVAVGMNLGAYGAELVRGAILAVPKGQWEAALSLGLSPFKRMVRIIFPQALLIML 145 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLV 350 PP + + LLK ++L + ADL+ Sbjct: 146 PPWGNLLIELLKGTALVSLISVADLM 171 >gi|218512395|ref|ZP_03509235.1| probable amino acid ABC transporter, permease protein [Rhizobium etli 8C-3] Length = 173 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 39/136 (28%), Positives = 70/136 (51%), Gaps = 1/136 (0%) Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317 G T++P + +AL A+ AE+VR + AV R Q EA +AL L+ + R V+LP Sbjct: 31 AGLTLTP-LQAGVLALGLNVGAYGAEVVRGAVKAVGREQSEACVALNLSRYQRMRHVILP 89 Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377 QA+ ++P + + LLK +++ + D+ + QTG + + +Y + Sbjct: 90 QALPLMLPTFCNNAIELLKGTAVVSLISLTDMTFQAQVVRAQTGNTLVPFATILILYFLM 149 Query: 378 SIMIALFMNRLNAKIA 393 ++ I+ M RL ++A Sbjct: 150 ALAISAAMRRLERRMA 165 >gi|330430187|gb|AEC21521.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Pusillimonas sp. T7-7] Length = 220 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 52/202 (25%), Positives = 99/202 (49%), Gaps = 15/202 (7%) Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248 IF FS + G +L F + R + + +Y+S ++ G P LV + + +++ Sbjct: 23 IFAFSAMFGGLLVGFVLAVLRIIPSRWTQIPATVYVS--MMRGTPLLVQV---FIIYYGL 77 Query: 249 PVLG-QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307 P +G F+ + +ALS A+I+E +R ++ + RGQ A +LGL + Sbjct: 78 PSIGISFDPLTAGV---------LALSLNAGAYISESLRGAIVGISRGQWSAGYSLGLNY 128 Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367 + V++PQA+R +P +++ ++L+K++SL + +L+ +I T Q + + Sbjct: 129 WQNLHYVVMPQALRLAVPSMSNSLISLIKDTSLVSVITVTELLLATKDVIATTFQPLPLY 188 Query: 368 LIWMFIYLSLSIMIALFMNRLN 389 L IY LS+ + RL Sbjct: 189 LAAAGIYWILSLCLEQVQARLE 210 >gi|227329359|ref|ZP_03833383.1| putative amino acid ABC transporter, permease protein [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 221 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 48/155 (30%), Positives = 76/155 (49%), Gaps = 24/155 (15%) Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286 F++FGLP+L L K GQ +++ I L Y+ EI+R Sbjct: 75 FIVFGLPSLGL----------KLTAGQ----------AALLAMLINLGAYST----EIIR 110 Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346 +G+ P+GQ EAA LGLT + V+LP A++ I P L SQ + ++ SS+ V + Sbjct: 111 AGIQVTPKGQWEAARVLGLTRMQTFLRVILPPALQRIYPALVSQCIIVMLGSSVVSQVSY 170 Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 +L I ++T + E+ L YL LS+++ Sbjct: 171 EELTFAANLIQSRTFLSFEVYLATTLCYLMLSVLM 205 >gi|304395108|ref|ZP_07376992.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea sp. aB] gi|304357361|gb|EFM21724.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea sp. aB] Length = 230 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 47/171 (27%), Positives = 88/171 (51%), Gaps = 10/171 (5%) Query: 231 GLPTLVLIALKY-----QLHFDKPVLG-QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284 G+P +V+I L Y LHF +LG + N + P ++ + +ALS AAF AE+ Sbjct: 63 GVPMVVVIFLAYYGLPPALHFVATLLGVEVN----AHSLPNWVIIIVALSACVAAFQAEV 118 Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344 + L + GQ +AA++LG + + R V+ PQ + + IP L + ++ ++K SLA A+ Sbjct: 119 WKGALNSFDNGQSDAALSLGYSGGQLFRRVMFPQIIVAAIPDLANAFMVIMKALSLAFAI 178 Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395 D+ + +E LI + Y+ ++ ++ +R+ A + ++ Sbjct: 179 EVVDIFAQAQLTAALNFYYLEAFLIAVVFYMVIAYLVTRIADRIEAALRVR 229 >gi|87121346|ref|ZP_01077236.1| polar amino acid uptake family ABC transporter, permease protein [Marinomonas sp. MED121] gi|86163503|gb|EAQ64778.1| polar amino acid uptake family ABC transporter, permease protein [Marinomonas sp. MED121] Length = 279 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 39/122 (31%), Positives = 65/122 (53%) Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329 +IAL+ AA+ EI+R VP+G++EAA A G+ K + LP+A++ +P + Sbjct: 154 FIALTLSVAAYEGEIMRGAFAGVPKGELEAAKAFGMPPFKILSRIWLPRAIQRTLPVIGG 213 Query: 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 + + LK + L + D +V I +T E +L+ IYLSL+ +IAL + L Sbjct: 214 EVILQLKATPLVATITLIDTYAVFSKIRQETYIVYEPLLLMTGIYLSLAGIIALLFHYLE 273 Query: 390 AK 391 + Sbjct: 274 KR 275 >gi|300715446|ref|YP_003740249.1| amino acid ABC transporter, permease protein [Erwinia billingiae Eb661] gi|299061282|emb|CAX58391.1| amino acid ABC transporter, permease protein [Erwinia billingiae Eb661] Length = 222 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 36/104 (34%), Positives = 60/104 (57%) Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337 A+ EI+R+G+ P+GQ EA LGLT + V+LP +++ I P L SQ + ++ Sbjct: 102 GAYSTEIIRAGIQVTPKGQWEAGRVLGLTRLQTFMRVVLPPSLKRIYPALVSQCIIVMLG 161 Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 SS+ V + +L I ++T + E+ L+ IYL+LSI++ Sbjct: 162 SSVVSQVSYEELTFAANLIQSRTFLSFEVYLVTTLIYLALSIVM 205 >gi|134295623|ref|YP_001119358.1| polar amino acid ABC transporter inner membrane subunit [Burkholderia vietnamiensis G4] gi|134138780|gb|ABO54523.1| amino acid ABC transporter membrane protein, PAAT family [Burkholderia vietnamiensis G4] Length = 259 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 64/234 (27%), Positives = 108/234 (46%), Gaps = 25/234 (10%) Query: 177 SFPTLTMDT--NAKIFVFSFVLG----IVLSLFATRLSRH---FHEKTGKALPLL---YI 224 S P L K V S V G +VL++ R S F AL L Y+ Sbjct: 39 SLPVLAQGAVLTVKFAVLSMVFGLFGAVVLAMMGIRQSEALEGFERIWVNALAWLARGYV 98 Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284 S L+ G P LV I + +++ P LG ++ P + IALS AA+++E Sbjct: 99 S--LMRGTPLLVQI---FVIYYGLPSLG-------ISLDPTPAGV-IALSANVAAYMSES 145 Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344 +R + + RGQ AA +LGL+ + R V+ PQA+R +P L++ ++L+K++SL + Sbjct: 146 MRGAINGIARGQWLAAYSLGLSWSQTLRYVIGPQALRIAVPSLSNSLISLIKDTSLVSVI 205 Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398 +L+ +I T Q + + L +Y L ++ +++L + Sbjct: 206 TVTELLRSAQEVIAATYQPLPLYLAAAAVYWVLCQILEWVQRWYEKRLSLPGRH 259 >gi|293375604|ref|ZP_06621878.1| ABC transporter, permease protein [Turicibacter sanguinis PC909] gi|292645821|gb|EFF63857.1| ABC transporter, permease protein [Turicibacter sanguinis PC909] Length = 219 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 46/139 (33%), Positives = 68/139 (48%), Gaps = 24/139 (17%) Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279 PLL FL FGLP L + Y VLG F+GGS Sbjct: 64 PLLIQLFFLYFGLPKLGIFLSSYACG----VLG-LTFLGGS------------------- 99 Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339 ++AE RSGL ++P QME+ ++LGLT + R ++ PQA+ +P ++ + L+K +S Sbjct: 100 YMAEAFRSGLESIPDIQMESGLSLGLTKWQVLRYIIFPQAVAVSLPAFSANVIFLIKETS 159 Query: 340 LAVAVGFADLVSVGGTIIN 358 + V ADL+ V +I Sbjct: 160 VFSVVALADLMYVAKGLIG 178 >gi|258646474|ref|ZP_05733943.1| putative amino-acid permease protein YxeN [Dialister invisus DSM 15470] gi|260403882|gb|EEW97429.1| putative amino-acid permease protein YxeN [Dialister invisus DSM 15470] Length = 234 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 40/148 (27%), Positives = 69/148 (46%), Gaps = 7/148 (4%) Query: 249 PVLGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304 PV F+ G+ V P + S+Y+ Y A+ +E +R L +V GQ EAA+A+G Sbjct: 83 PVFSAFS---GTEVKPFDVSPYWSVYLCFILYNTAYQSENIRGALRSVDHGQYEAAVAMG 139 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364 +T +A ++LPQA +P + YL +K +L V D+ + + + Sbjct: 140 MTSFRAFTRIVLPQAFVVALPAFFTYYLKTIKLLALVFTVKVVDMFAKADIFSALYNRRM 199 Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKI 392 E + Y L+I++ +R K+ Sbjct: 200 EPYIADAIAYWGLAILLTFLFDRWEKKL 227 >gi|226323644|ref|ZP_03799162.1| hypothetical protein COPCOM_01419 [Coprococcus comes ATCC 27758] gi|225207828|gb|EEG90182.1| hypothetical protein COPCOM_01419 [Coprococcus comes ATCC 27758] Length = 228 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 36/137 (26%), Positives = 73/137 (53%), Gaps = 7/137 (5%) Query: 220 PLLYISTFLIF---GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276 PL +++ +++ G P ++ + + Y P L N I G + F++ ++ Sbjct: 50 PLSWLARLIVWVIRGTPLMIQLLIIYYF----PGLVLHNPIWGGGETGRFLAAAVSFIIN 105 Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336 A + +EI R G+ VP GQ EA + LG+T + + L Q ++ I+PP++++ + L+K Sbjct: 106 YACYFSEIYRGGIQGVPEGQKEAGLVLGMTKHQIFFKITLLQMIKRIVPPMSNEIITLVK 165 Query: 337 NSSLAVAVGFADLVSVG 353 ++SLA + +++ G Sbjct: 166 DTSLARIIALQEIIWAG 182 >gi|124486251|ref|YP_001030867.1| hypothetical protein Mlab_1435 [Methanocorpusculum labreanum Z] gi|124363792|gb|ABN07600.1| polar amino acid ABC transporter, inner membrane subunit [Methanocorpusculum labreanum Z] Length = 255 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 46/153 (30%), Positives = 79/153 (51%), Gaps = 13/153 (8%) Query: 207 LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF 266 +SR + K L LY+ F G P LVL+ + L+F P +G V + Sbjct: 67 VSRVYGPTPVKWLAKLYVIFFR--GCPLLVLL---FILYFGLPSIG--------IVLGSY 113 Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326 S + +A+ +E +R GL ++ RGQ+ AA +LG+T + V++PQA+R +P Sbjct: 114 FSALVGFILCNSAYNSEYLRGGLQSIKRGQLLAARSLGMTKAQGVMYVVVPQALRRALPG 173 Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359 ++++++ L+K SSLA V +L I ++ Sbjct: 174 VSNEFIYLIKYSSLAYVVAVIELTGAAKIIASK 206 >gi|330861366|emb|CBX71601.1| histidine transport system permease protein hisQ [Yersinia enterocolitica W22703] Length = 198 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 43/128 (33%), Positives = 67/128 (52%), Gaps = 6/128 (4%) Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVL--GQFNFIG-GSTVSPEFMSLYIALSCYTAAFIA 282 T L+ G+P LV++ L L F +L G F +G G F+S +A+ A+ Sbjct: 53 TTLVRGIPELVIMLL---LFFGGEMLVNGFFGLLGLGPVRFNTFVSGVLAIGIVFGAYYT 109 Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342 E R V RGQ+EAA+A G+ R+ ++LPQ + IP + + +L L+K S+L Sbjct: 110 ETFRGAFQTVERGQLEAAVAYGMRPRQVFWRIMLPQMLSFAIPGINNNWLGLMKASALIS 169 Query: 343 AVGFADLV 350 +G D+V Sbjct: 170 ILGLEDMV 177 >gi|295676370|ref|YP_003604894.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. CCGE1002] gi|295436213|gb|ADG15383.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. CCGE1002] Length = 219 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 33/104 (31%), Positives = 62/104 (59%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 IALS AA+++E +R ++ + +GQ A+ +LGL+ R+ R V+ PQA+R +P L++ Sbjct: 92 IALSANVAAYLSESMRGAILGIHQGQWLASYSLGLSRRQTLRYVIAPQALRIAVPSLSNS 151 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374 ++L+K++SL + +L+ +I T Q + + L +Y Sbjct: 152 LISLIKDTSLVSVITVTELLRSAQEMIASTYQPLPLYLAAAAVY 195 >gi|317049449|ref|YP_004117097.1| polar amino acid ABC transporter inner membrane subunit [Pantoea sp. At-9b] gi|316951066|gb|ADU70541.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea sp. At-9b] Length = 269 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 53/163 (32%), Positives = 87/163 (53%), Gaps = 11/163 (6%) Query: 233 PTLVLI-ALKYQLHFDKPVLG-QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290 P LVL+ ++ Y L + +LG QF T+SP F ++ + LS TAA AE++R + Sbjct: 108 PWLVLLFSMLYLLPYRVELLGVQF------TLSPLFKAI-VGLSLPTAANFAEVIRGAVN 160 Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 +V GQ E+A +LG + + R+V+LPQA+R IIP + Y L +++LA G ++V Sbjct: 161 SVHSGQWESARSLGYSPWQIYRIVILPQALRRIIPGWMNLYALLAISTALATVTGVQEVV 220 Query: 351 SVGGTII--NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 ++ T + G I + + ++ IAL RL + Sbjct: 221 TLLRTTLATESEGSLIYFYVTVLLMFFCYCYPIALLARRLENQ 263 >gi|325518276|gb|EGC98023.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia sp. TJI49] Length = 170 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 31/57 (54%), Positives = 41/57 (71%) Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321 EF++ ++ LS YTAAF+AE +GL V R Q +AA ALGLT +A R V+LPQA+R Sbjct: 112 EFVAGWVGLSAYTAAFVAEECAAGLRGVRRAQHDAAAALGLTPWQALRYVVLPQAVR 168 >gi|304394878|ref|ZP_07376762.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea sp. aB] gi|304357131|gb|EFM21494.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea sp. aB] Length = 228 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 34/123 (27%), Positives = 73/123 (59%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 +AL AA+ +EI+R GL AV + +EAA G++ K + LP A+R +P +++ Sbjct: 98 LALILNDAAYTSEILRGGLRAVSQQSLEAAKVSGMSSYKIFTRITLPIAIRQALPAYSNE 157 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 ++++K +SL + ++ + +I++ T +A+E+ L IYL L+++++ ++ L Sbjct: 158 IISMIKATSLVSTISLMEMTGIADSIVSSTFRALEVFLSAAVIYLILTMLVSKGVSMLER 217 Query: 391 KIA 393 +++ Sbjct: 218 RLS 220 >gi|292656557|ref|YP_003536454.1| putative glutamine ABC transporter permease [Haloferax volcanii DS2] gi|291370810|gb|ADE03037.1| ABC-type transport system permease protein (probable substrate glutamine) [Haloferax volcanii DS2] Length = 276 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 32/86 (37%), Positives = 54/86 (62%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + IAL+ AA++ E VR G+ AVP GQMEAA +LG+ + + R V++PQA R+ + Sbjct: 143 FPTAIIALTLNHAAYVGEAVRGGIGAVPDGQMEAARSLGMGYIQGMREVVVPQAWRNALA 202 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVS 351 + + + L+K++SL + +L+ Sbjct: 203 AIGNDQVILVKDTSLLTIIAIPELMQ 228 >gi|222106918|ref|YP_002547709.1| ABC transporter membrane spanning protein (amino acid) [Agrobacterium vitis S4] gi|221738097|gb|ACM38993.1| ABC transporter membrane spanning protein (amino acid) [Agrobacterium vitis S4] Length = 213 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 58/170 (34%), Positives = 86/170 (50%), Gaps = 18/170 (10%) Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281 L+IS F G+P LV + L Y L FIG + P ++ I LS TAA+ Sbjct: 51 LFISFFR--GVPLLVQLLLIYNL---------LPFIGINV--PSVVAAIIGLSLCTAAYQ 97 Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341 AE +R G +VP+G +EAA G + R+ + LP A+R P L ++ + +LK+SSL Sbjct: 98 AENLRGGFESVPKGLIEAADMAGFSGRQTFLRIKLPIALRLTFPALVNEAIMILKSSSLV 157 Query: 342 VAVGFADLVSVGGTIINQTGQAIEII----LIWMFIYLSLSIMIALFMNR 387 VG +L + + T IE+ LI++ I S++ MIA R Sbjct: 158 SVVGIVELTRMAQDLAASTYLPIELFSSAALIYLIICWSVA-MIARITER 206 >gi|163742410|ref|ZP_02149797.1| polar amino acid uptake family ABC transporter, permease protein [Phaeobacter gallaeciensis 2.10] gi|161384360|gb|EDQ08742.1| polar amino acid uptake family ABC transporter, permease protein [Phaeobacter gallaeciensis 2.10] Length = 258 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 45/173 (26%), Positives = 84/173 (48%), Gaps = 6/173 (3%) Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY----IALSCYTAAFIAE 283 +I G P L+ I L Y + + QF +I S + P + +AL+ A + E Sbjct: 88 VIRGTPLLLQIWLLY--YGLGSLFPQFPWIRSSELWPYLRQAWPYAVLALTLSYAGYEGE 145 Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343 ++R V +GQ+EAA A G+ R + LPQA+R+++P L + + LK + L Sbjct: 146 VMRGAFSGVAKGQLEAAKAYGMPRLTMFRRIWLPQAVRNVLPTLGGETILQLKATPLVAT 205 Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396 + D+ +V + + T E +L+ +Y++++ +I L R ++ + Sbjct: 206 ITVLDIYAVSSRVRSDTFIVYEPLLLLALVYMAIAGVITLAFKRFEDRVPQRR 258 >gi|240850844|ref|YP_002972244.1| glutamate-aspartate ABC transporter permease component GltK [Bartonella grahamii as4aup] gi|240267967|gb|ACS51555.1| glutamate-aspartate ABC transporter permease component GltK [Bartonella grahamii as4aup] Length = 238 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 29/89 (32%), Positives = 56/89 (62%), Gaps = 1/89 (1%) Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315 F+ G+++ S I + + A+ AEI+R+G+ +V +GQ A ALG+T+ ++ +V+ Sbjct: 99 FLTGTSIGAN-KSALITFTAFETAYFAEIIRAGINSVSQGQKYAGQALGMTYWQSMYIVI 157 Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344 LPQA R ++P +Q + L ++++L A+ Sbjct: 158 LPQAFRDMLPVFLTQVIILFQDTTLVYAI 186 >gi|312863467|ref|ZP_07723705.1| amino acid ABC transporter, permease protein [Streptococcus vestibularis F0396] gi|322516240|ref|ZP_08069172.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus vestibularis ATCC 49124] gi|311101003|gb|EFQ59208.1| amino acid ABC transporter, permease protein [Streptococcus vestibularis F0396] gi|322125304|gb|EFX96669.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus vestibularis ATCC 49124] Length = 226 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 60/208 (28%), Positives = 105/208 (50%), Gaps = 36/208 (17%) Query: 193 SFVLGIVLSLFA-------TRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH 245 SF+LG+V+S+ ++LS + E + + PLL FL FGLP + L+ L Sbjct: 31 SFLLGLVVSVIRHYRVPVLSQLSTAYIELS-RNTPLLIQLFFLYFGLPRIGLV-----LS 84 Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305 + + F+GGS ++AE RSGL AV + Q E +++GL Sbjct: 85 SEACAVVGLIFLGGS-------------------YMAESFRSGLEAVSQTQHEVGLSIGL 125 Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN---QTGQ 362 T + R V+LPQA+ +P ++ + L+K +S+ AV ADL+ V +I +T Sbjct: 126 TPFQVFRYVVLPQAVAVALPSFSANVIFLIKETSVFSAVALADLMYVAKDLIGLYYETDV 185 Query: 363 AIEIILI-WMFIYLSLSIMIALFMNRLN 389 A+ ++++ ++ + L +S++ + RL Sbjct: 186 ALGMLVVAYLLMLLPISLVFSWIERRLR 213 >gi|262404204|ref|ZP_06080759.1| arginine/ornithine ABC transporter permease protein AotQ [Vibrio sp. RC586] gi|262349236|gb|EEY98374.1| arginine/ornithine ABC transporter permease protein AotQ [Vibrio sp. RC586] Length = 246 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 39/137 (28%), Positives = 70/137 (51%), Gaps = 8/137 (5%) Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321 VSP F++ + + A++AE R ++AV +G++EAA A G++ + R +LLPQ +R Sbjct: 112 VSP-FIAGVLTIGFIFGAYMAETFRGAILAVDKGELEAAKAYGMSSAMSFRRILLPQMIR 170 Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 IP + +L LLK ++L +G D+V + T Y++++I+ Sbjct: 171 HAIPGFGNNWLVLLKTTALVSIIGLEDMVRISSLAAGSTKMPFT-------FYMAVAIIF 223 Query: 382 ALFMNRLNAKIALKEKK 398 F + + L E+K Sbjct: 224 LFFTSVSTGLLKLIERK 240 >gi|197294963|ref|YP_002153504.1| putative binding-protein-dependent transport system protein [Burkholderia cenocepacia J2315] gi|254250401|ref|ZP_04943720.1| hypothetical protein BCPG_05293 [Burkholderia cenocepacia PC184] gi|124879535|gb|EAY66891.1| hypothetical protein BCPG_05293 [Burkholderia cenocepacia PC184] gi|195944442|emb|CAR57044.1| putative binding-protein-dependent transport system component [Burkholderia cenocepacia J2315] Length = 240 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 53/197 (26%), Positives = 97/197 (49%), Gaps = 12/197 (6%) Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL----GQFNFIGGST 261 +LSR+ +T + L LY + F G+P L++I Y +F L GQ+ G Sbjct: 47 KLSRY---RTLRLLGDLYTTVFR--GVPELLVI---YLFYFGGSTLVTAVGQWFGAEGFI 98 Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321 P F+ +A+ + A+ AE+ R+ ++AV +G++EAA ++G+ R +L+PQ +R Sbjct: 99 GVPPFVIGALAVGMISGAYQAEVYRAAVLAVSKGELEAARSIGMPRSMVLRRILVPQVLR 158 Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381 +P + + + LK+S+L G A+L+ N T Q + +YL ++ + Sbjct: 159 FALPGIGNVWQLSLKDSALISVTGLAELLRTSQIAANSTHQYFVFFVAGGALYLLMTGLS 218 Query: 382 ALFMNRLNAKIALKEKK 398 NR A + ++ Sbjct: 219 NRVFNRAEAIVGRSFRR 235 >gi|78067201|ref|YP_369970.1| ABC amino acid transporter, inner membrane subunit [Burkholderia sp. 383] gi|77967946|gb|ABB09326.1| amino acid ABC transporter membrane protein 1, PAAT family [Burkholderia sp. 383] Length = 229 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 40/133 (30%), Positives = 69/133 (51%), Gaps = 10/133 (7%) Query: 224 ISTFLIFGLPTLVLI-----ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTA 278 + T LI G+P LVL+ +L+ L+ LG + P F++ + L Sbjct: 52 VYTTLIRGVPDLVLMLLLFYSLQIWLNMATDALGWDQI----DIDP-FLAGVLVLGFIYG 106 Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338 A+ E R ++VPRGQ+EA A G+T+ + ++ PQ MR +P + + + L+K++ Sbjct: 107 AYFTETFRGAFLSVPRGQLEAGSAYGMTNWQVFTRIMFPQMMRFALPGIGNNWQVLVKST 166 Query: 339 SLAVAVGFADLVS 351 +L +G AD+V Sbjct: 167 ALVSIIGLADVVK 179 >gi|327191403|gb|EGE58428.1| octopine ABC transporter, permease protein [Rhizobium etli CNPAF512] Length = 234 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 42/135 (31%), Positives = 75/135 (55%), Gaps = 4/135 (2%) Query: 251 LGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306 LGQF I S + P + ++L+ TA + AEI R G+ AV ++EAA ++G++ Sbjct: 76 LGQFGVIRYSFLWPFLREPMVCAVLSLALCTAGYTAEIFRGGIRAVSPKEIEAARSIGMS 135 Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366 R +L P A R +P +++ + ++K+++LA V ++ V +I+QT + +E+ Sbjct: 136 GFLMVRRILAPIAFRHALPAYSTEIVLMMKSTALASLVTVWEVTGVAQRLISQTYRTMEV 195 Query: 367 ILIWMFIYLSLSIMI 381 L IYL L+ +I Sbjct: 196 FLCAAIIYLVLNFII 210 >gi|309777758|ref|ZP_07672707.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Erysipelotrichaceae bacterium 3_1_53] gi|308914524|gb|EFP60315.1| amino acid ABC transporter, amino acid-binding protein/permease protein [Erysipelotrichaceae bacterium 3_1_53] Length = 256 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 39/128 (30%), Positives = 71/128 (55%), Gaps = 14/128 (10%) Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281 LY+ F G P +V + Y H +P+L G T+ +S T A++ Sbjct: 80 LYVWIFR--GTPMMVQALIIY--HGLRPILNWSPVTAGITI----------ISINTGAYM 125 Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341 AEI+R+G+ ++ +GQ EAA +LG+T + ++LPQA+R+ P + ++++ +K+SS+ Sbjct: 126 AEIIRAGIQSIDKGQNEAARSLGMTSTQTMMSIILPQAIRNSFPSIGNEFIVNIKDSSML 185 Query: 342 VAVGFADL 349 +G +L Sbjct: 186 NVIGVIEL 193 >gi|209546710|ref|YP_002278628.1| polar amino acid ABC transporter inner membrane protein [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209537954|gb|ACI57888.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 213 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 54/162 (33%), Positives = 83/162 (51%), Gaps = 15/162 (9%) Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290 G+P LV + L Y L PV+G N P ++ I LS TAA+ AE +R G Sbjct: 58 GVPLLVELLLIYNLL---PVIG-INV-------PSIVAAIIGLSLCTAAYQAENLRGGFA 106 Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350 +VP G +E+A +GLT R+ R + +P A+R P L ++ + +LK SSL VG +L Sbjct: 107 SVPLGLVESAEMVGLTPRQIFRRIKVPIALRLTFPALVNEAILILKASSLVSVVGIVELT 166 Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIA----LFMNRL 388 + + T +++ IYL ++ ++A L NRL Sbjct: 167 RMAQDLAGSTFLPLQLFASAGLIYLVINWLVAHAGVLIENRL 208 >gi|118469776|ref|YP_887059.1| glutamate transporter permease GluD [Mycobacterium smegmatis str. MC2 155] gi|118171063|gb|ABK71959.1| glutamate transporter permease protein GluD [Mycobacterium smegmatis str. MC2 155] Length = 299 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 37/121 (30%), Positives = 75/121 (61%) Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 L+ Y + IAEIVR+G+ ++PRGQ EAA +LGL+ + R++ LPQA+ +++P L SQ Sbjct: 147 GLTLYNGSVIAEIVRAGVHSLPRGQSEAAASLGLSWWQTMRMIQLPQAITAMLPVLVSQL 206 Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391 + +LK++++ + F ++V G I + G + +++ + +S++ ++ R+ + Sbjct: 207 VVVLKDTAIGYQITFVEMVRQGTVIGSSYGNYLPALIVIAVLMISVNFALSALATRIERR 266 Query: 392 I 392 + Sbjct: 267 L 267 >gi|325062129|gb|ADY65819.1| amino acid ABC transporter, membrane spanning protein [Agrobacterium sp. H13-3] Length = 230 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 43/147 (29%), Positives = 79/147 (53%), Gaps = 5/147 (3%) Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302 QL F VL +F V P F++ +AL AA+ +E+ R G+ AV GQ EAA A Sbjct: 78 QLFFLYYVLPEFGI-----VLPAFLTGALALGLQYAAYTSEVYRGGMEAVHHGQWEAATA 132 Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362 L LT + R +++PQA+ I+P + + + ++K + + V +++ + I +T + Sbjct: 133 LNLTRMQTYRDIIIPQAIPRIVPAMGNYLVAMIKETPVLSVVTVLEMMGLANMIGERTFE 192 Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLN 389 + + + I+L L+I+ + ++RL Sbjct: 193 YLVPLTLVGLIFLLLTIICSAGLSRLQ 219 Score = 37.7 bits (86), Expect = 3.3, Method: Compositional matrix adjust. Identities = 30/78 (38%), Positives = 40/78 (51%), Gaps = 6/78 (7%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 IL+G T A +G A I+G + R S KL++W V VE R+ P LV +FFL Sbjct: 23 ILIGLTVTLKAAAAGFAIALILGLVFALLRRSRVKLISWPTAVVVEFLRDTPLLVQLFFL 82 Query: 149 YKSVLSVLPIPDHSIVLP 166 Y +P+ IVLP Sbjct: 83 YYV------LPEFGIVLP 94 >gi|256825959|ref|YP_003149919.1| amino acid ABC transporter membrane protein [Kytococcus sedentarius DSM 20547] gi|256689352|gb|ACV07154.1| amino acid ABC transporter membrane protein [Kytococcus sedentarius DSM 20547] Length = 215 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 35/122 (28%), Positives = 64/122 (52%) Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330 + + + + ++AE R+G+ +VPRGQ EAA AL L R+ +++PQA+R+ +P L Sbjct: 92 VVMGIHYSTYMAESYRAGIESVPRGQWEAATALSLPARRTWTDLIIPQALRNTLPSLGGW 151 Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390 + + K++ + +G ++V+ + Q E + I I+L S L M L Sbjct: 152 AIAMFKDTPFLIVIGVPEMVTAAQRVGAQNFTYTEALTIAGAIFLVASYPTFLLMRYLEK 211 Query: 391 KI 392 K+ Sbjct: 212 KL 213 >gi|91788992|ref|YP_549944.1| amino acid ABC transporter permease [Polaromonas sp. JS666] gi|91698217|gb|ABE45046.1| amino acid ABC transporter membrane protein, PAAT family [Polaromonas sp. JS666] Length = 222 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 48/172 (27%), Positives = 84/172 (48%), Gaps = 15/172 (8%) Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLG-QFNFIGGSTVSPEFMSLYIALSCYTAAF 280 LY+S + G P LV + + ++F P +G QF+ I + LS A+ Sbjct: 59 LYVSC--MRGTPLLVQL---FVIYFGLPSIGIQFDPITAGI---------LGLSLNVGAY 104 Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340 ++E +R + V GQ AA +LGLT + R V+ PQA+R +P L++ ++L+K++SL Sbjct: 105 LSETIRGAINGVEHGQWNAARSLGLTQAQTLRHVIGPQALRLAVPSLSNSLISLIKDTSL 164 Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 + +L+ +I T Q + L IY ++S +L ++ Sbjct: 165 VSVIAVGELMLATKEVIATTFQPFPLYLAAAAIYWAMSASFETLQKKLEVRL 216 >gi|315612441|ref|ZP_07887354.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis ATCC 49296] gi|315315422|gb|EFU63461.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis ATCC 49296] Length = 240 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 51/169 (30%), Positives = 88/169 (52%), Gaps = 9/169 (5%) Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248 I + + VL + +LF L + + + ++ L+Y++ I P ++LI Y L Sbjct: 23 IMIVAMVLSFLPALFLA-LGQIYKVRGVRSFSLVYLA--FIRATPPILLILFFYSLF--P 77 Query: 249 PVLGQF-NFIGGSTVSPEFMSLYIALSCY---TAAFIAEIVRSGLIAVPRGQMEAAIALG 304 +L QF IG + LY A Y T +EI+RS ++ V +GQ+EAA A+G Sbjct: 78 SLLNQFLKSIGSDLDIFKLDPLYYAFIIYSLMTVGSFSEILRSAILTVDKGQLEAAHAIG 137 Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353 LT +A ++ PQA+RS +P L + +N++K +SL + D+ ++ Sbjct: 138 LTTTQAYLRIVFPQALRSALPNLANLVINIVKGTSLVFVMTIKDITAIA 186 >gi|296533326|ref|ZP_06895930.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Roseomonas cervicalis ATCC 49957] gi|296266342|gb|EFH12363.1| glutamine ABC superfamily ATP binding cassette transporter, membrane protein [Roseomonas cervicalis ATCC 49957] Length = 219 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 40/126 (31%), Positives = 73/126 (57%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F + I L +A++ E+ RSG++AV G +EAA +LGL+ + V+LPQA R ++P Sbjct: 90 FQAGVIGLGVAYSAYMGEVFRSGMLAVDPGAVEAAESLGLSRLRIMTRVILPQATRIVLP 149 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 P + + +LK+SS A + A++ + I + T + E+ + +YL+LS+ + + + Sbjct: 150 PYGNMLIMMLKDSSQASVITVAEISTQSRMIASSTFKNQEVFTLAALLYLALSVPLIILV 209 Query: 386 NRLNAK 391 RL + Sbjct: 210 GRLEKR 215 >gi|283783252|ref|YP_003374006.1| ABC transporter, permease protein [Gardnerella vaginalis 409-05] gi|298252813|ref|ZP_06976607.1| ABC-type amino acid transporter, permease component [Gardnerella vaginalis 5-1] gi|283442213|gb|ADB14679.1| ABC transporter, permease protein [Gardnerella vaginalis 409-05] gi|297533177|gb|EFH72061.1| ABC-type amino acid transporter, permease component [Gardnerella vaginalis 5-1] Length = 225 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 48/127 (37%), Positives = 68/127 (53%), Gaps = 2/127 (1%) Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 LS YTAAF+ E +RSGL VP GQ EA ALGL ++ V+LPQ + PL + + Sbjct: 99 GLSLYTAAFVCESLRSGLNTVPVGQAEACRALGLNFFQSATQVILPQTFCGSVAPLGNTF 158 Query: 332 LNLLKNSSLAVAVGFADLVS--VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 + LLKNS++A A A S + I + I LI+ Y+ L I I + L+ Sbjct: 159 IALLKNSTVAAAASVATETSTMMSEMIEKHADLIVPIFLIFACGYIMLIIPIGILTTYLS 218 Query: 390 AKIALKE 396 K+A++ Sbjct: 219 NKLAVRR 225 >gi|313885604|ref|ZP_07819354.1| ABC transporter, permease protein [Eremococcus coleocola ACS-139-V-Col8] gi|312619334|gb|EFR30773.1| ABC transporter, permease protein [Eremococcus coleocola ACS-139-V-Col8] Length = 551 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 32/106 (30%), Positives = 61/106 (57%) Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 +S T A+++E++R G+ +V GQ EAA A+G+ H + V+LPQA+R+ +P L ++++ Sbjct: 409 VSINTGAYLSEVMRGGITSVDEGQAEAAKAIGMNHFQTMSNVVLPQALRATLPALGNEFV 468 Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378 +K++S+ + +L ++ T + LI IY L+ Sbjct: 469 INIKDTSVLNVIAVTELFFTTKSVAGSTYLTFQTFLITSIIYFVLT 514 >gi|304437586|ref|ZP_07397541.1| amino-acid ABC superfamily ATP binding cassette transporter permease protein [Selenomonas sp. oral taxon 149 str. 67H29BP] gi|304369399|gb|EFM23069.1| amino-acid ABC superfamily ATP binding cassette transporter permease protein [Selenomonas sp. oral taxon 149 str. 67H29BP] Length = 232 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 39/124 (31%), Positives = 67/124 (54%), Gaps = 1/124 (0%) Query: 260 STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319 V P + +++I + T A + E RS L+A+P+GQ+EA GL+ + V+LPQA Sbjct: 97 EAVDPFWYAVFI-FTLNTIALLTEAFRSALLAIPKGQLEAGAVCGLSEAETYLHVILPQA 155 Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379 + +P + + +NL+K +SLA + D+++VG + IE L +YL L Sbjct: 156 LVVALPSIANITVNLIKGTSLAFLMTVKDIMAVGKVAASYGYNYIEAYLDVFIVYLILCT 215 Query: 380 MIAL 383 ++ L Sbjct: 216 IVQL 219 >gi|262191303|ref|ZP_06049496.1| arginine/ornithine ABC transporter permease protein AotQ [Vibrio cholerae CT 5369-93] gi|262032799|gb|EEY51344.1| arginine/ornithine ABC transporter permease protein AotQ [Vibrio cholerae CT 5369-93] Length = 246 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 55/206 (26%), Positives = 99/206 (48%), Gaps = 31/206 (15%) Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKY---QLHFDKPVLGQFN-FIGGSTVSPE---- 265 + +A+ LY T +I G+P LVL+ L + Q+ + L FN FI ++ + Sbjct: 45 RWARAIATLY--TTIIRGIPDLVLMMLIFFGGQILLNNG-LSWFNEFINQWLIARDPNHE 101 Query: 266 ---FMSLYIALSCYTA----------AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312 ++ Y+ +S + A A++AE R ++AV +G++EAA A G++ + R Sbjct: 102 WVAYLPDYVDISPFVAGVLTIGFIFGAYMAETFRGAILAVDKGELEAAKAYGMSAAMSFR 161 Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372 +LLPQ +R IP + +L LLK ++L +G D+V + T Sbjct: 162 RILLPQMIRHAIPGFGNNWLVLLKTTALVSIIGLEDMVRISSLAAGSTKMPFT------- 214 Query: 373 IYLSLSIMIALFMNRLNAKIALKEKK 398 Y++++I+ F + + L E+K Sbjct: 215 FYMAVAIIFLFFTSVSTGLLKLLERK 240 >gi|259908947|ref|YP_002649303.1| arginine transporter permease subunit ArtQ [Erwinia pyrifoliae Ep1/96] gi|224964569|emb|CAX56082.1| Arginine transport system permease protein [Erwinia pyrifoliae Ep1/96] gi|283478953|emb|CAY74869.1| Arginine ABC transport system, inner membrane component [Erwinia pyrifoliae DSM 12163] Length = 238 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 54/186 (29%), Positives = 95/186 (51%), Gaps = 12/186 (6%) Query: 217 KALPLLYISTFLIFGLPTLVLI---ALKYQLHFDK-PVLGQFNFIGGSTVSPEFMSLYIA 272 +ALP + + F+ FG L+LI L F + PV Q + I VSP F+ IA Sbjct: 55 RALPEILVVLFIYFGASQLLLILSDGFTINLAFVQIPV--QVS-IENFDVSP-FLCGVIA 110 Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332 L+ +++ ++ +R L AVP GQ E+ ALG+ +++PQ R +P L +Q+L Sbjct: 111 LAILYSSYASQTLRGALQAVPLGQWESGQALGMKKSAVFLRLIVPQMWRHALPGLGNQWL 170 Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392 LLK+++L + D++ +I +T + W I ++ ++I LF ++ +I Sbjct: 171 VLLKDTALVSLISVNDIMLQTKSIATRTQEP----FTWYVIAAAIYLVITLFSQQVLKRI 226 Query: 393 ALKEKK 398 L+ + Sbjct: 227 ELRATR 232 >gi|56962685|ref|YP_174411.1| amino acid ABC transporter permease [Bacillus clausii KSM-K16] gi|56908923|dbj|BAD63450.1| amino acid ABC transporter permease [Bacillus clausii KSM-K16] Length = 223 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 37/108 (34%), Positives = 58/108 (53%), Gaps = 10/108 (9%) Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301 Y L P L NF+ GS IA+ A+ +E+VR + ++ GQ EAAI Sbjct: 73 YALPMIFPGLSMSNFLAGS----------IAVGLNYGAYASEVVRGAIHSIAVGQTEAAI 122 Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349 +L ++ + RLV+LPQA+R ++P + + LLK +SL + AD+ Sbjct: 123 SLNMSKWQRMRLVILPQAVRLMLPGFGNNAIELLKGTSLVYFIALADM 170 >gi|107022252|ref|YP_620579.1| amino acid ABC transporter permease [Burkholderia cenocepacia AU 1054] gi|116689197|ref|YP_834820.1| polar amino acid ABC transporter, inner membrane subunit [Burkholderia cenocepacia HI2424] gi|105892441|gb|ABF75606.1| amino acid ABC transporter membrane protein 1, PAAT family [Burkholderia cenocepacia AU 1054] gi|116647286|gb|ABK07927.1| amino acid ABC transporter membrane protein 1, PAAT family [Burkholderia cenocepacia HI2424] Length = 229 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 49/189 (25%), Positives = 94/189 (49%), Gaps = 6/189 (3%) Query: 212 HEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQF-NFIGGSTVSPE-FMSL 269 H + +A+ Y T LI +P LVL+ L + + + L QF + +G + + + F++ Sbjct: 42 HNRVLRAIATGY--TTLIRSVPDLVLMLLLF--YSIQIWLNQFTDLVGWNQIDIDPFVAG 97 Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329 + L A+ E R ++VPRGQ+EA A G++ + ++ PQ MR +P + + Sbjct: 98 VLTLGFIYGAYFTETFRGAFLSVPRGQLEAGSAYGMSGARVFVRIMFPQMMRFALPGIGN 157 Query: 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 + L+K ++L +G AD+V T IL+ IYL+++ + L + +L Sbjct: 158 NWQVLVKATALVSIIGLADVVKAAQDAGKSTFNMFFFILVAALIYLAITTVSNLVLIQLE 217 Query: 390 AKIALKEKK 398 + ++ + Sbjct: 218 KRYSMGVRH 226 >gi|291007840|ref|ZP_06565813.1| amino acid ABC transporter, permease protein [Saccharopolyspora erythraea NRRL 2338] Length = 230 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 40/133 (30%), Positives = 73/133 (54%), Gaps = 2/133 (1%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G +SP ++ + L + A ++AE+ R+G+ VP GQ EAA AL L R+ V+LPQ Sbjct: 92 GIQMSP-LLTGVVGLGLHYATYVAEVYRAGIDGVPAGQWEAATALNLPTRRVWTDVILPQ 150 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378 A+ IP L + + L K+ VA+ + +V + T + E I + +YL+++ Sbjct: 151 AIPRSIPALGNYLIALFKDVPQLVAITVLEPFTVAREVTADTFRPFEAITLAGLLYLAVT 210 Query: 379 IMIALFMNRLNAK 391 ++++ ++ RL + Sbjct: 211 LVMS-YLGRLAER 222 >gi|118592148|ref|ZP_01549541.1| ABC amino acid transporter, inner membrane subunit [Stappia aggregata IAM 12614] gi|118435120|gb|EAV41768.1| ABC amino acid transporter, inner membrane subunit [Stappia aggregata IAM 12614] Length = 244 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 38/95 (40%), Positives = 53/95 (55%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 F S IA+S + A A+I+R+GL +V GQ EAA A K L++LPQAM IIP Sbjct: 84 FWSACIAISVWGGANGAQILRAGLNSVGNGQREAAAAFNFGPAKTLLLIVLPQAMPVIIP 143 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360 P +++ +SL VG +L+ G +I QT Sbjct: 144 PYVGLMTAVVQATSLGAVVGAQELLRSGQILIEQT 178 >gi|297243523|ref|ZP_06927455.1| ABC-type amino acid transporter, permease component [Gardnerella vaginalis AMD] gi|296888568|gb|EFH27308.1| ABC-type amino acid transporter, permease component [Gardnerella vaginalis AMD] Length = 175 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 48/127 (37%), Positives = 68/127 (53%), Gaps = 2/127 (1%) Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331 LS YTAAF+ E +RSGL VP GQ EA ALGL ++ V+LPQ + PL + + Sbjct: 49 GLSLYTAAFVCESLRSGLNTVPVGQAEACRALGLNFFQSATQVILPQTFCGSVAPLGNTF 108 Query: 332 LNLLKNSSLAVAVGFADLVS--VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389 + LLKNS++A A A S + I + I LI+ Y+ L I I + L+ Sbjct: 109 IALLKNSTVAAAASVATETSTMMSEMIEKHADLIVPIFLIFACGYIMLIIPIGILTTYLS 168 Query: 390 AKIALKE 396 K+A++ Sbjct: 169 NKLAVRR 175 >gi|312958426|ref|ZP_07772946.1| amino acid ABC transporter, permease protein [Pseudomonas fluorescens WH6] gi|311286969|gb|EFQ65530.1| amino acid ABC transporter, permease protein [Pseudomonas fluorescens WH6] Length = 240 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 39/129 (30%), Positives = 70/129 (54%), Gaps = 2/129 (1%) Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH-RKATRLVLLPQAMRSII 324 F + IAL A+ E++R +I++P+G EA +ALGL+ R TRL+ +PQ R + Sbjct: 106 FAAGVIALGLCFGAYATEVLRGAIISIPKGHREAGVALGLSKVRIFTRLI-MPQMWRIAL 164 Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384 P L + +L L+K+++L +G +++ + T Q ++ IYL L+ + + Sbjct: 165 PGLGNLFLILMKDTALVTVIGLEEIMRHAQIAVTVTKQPFTFYMVAALIYLGLTSLSMVA 224 Query: 385 MNRLNAKIA 393 M+ L + A Sbjct: 225 MHFLEKRAA 233 >gi|254781113|ref|YP_003065526.1| amino acid ABC transporter (permease) [Candidatus Liberibacter asiaticus str. psy62] gi|254040790|gb|ACT57586.1| amino acid ABC transporter (permease) [Candidatus Liberibacter asiaticus str. psy62] Length = 226 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 60/217 (27%), Positives = 112/217 (51%), Gaps = 40/217 (18%) Query: 177 SFPTL-------TMDTNAKIFVFSFVLGIVLSLFATRLSR-------HFHEKTGKALPLL 222 SFP L T+ FV S ++G +++ S HF+ + PLL Sbjct: 12 SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLL 71 Query: 223 YISTFLIF-GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281 + F+IF GLP + ++ FD F+++ I+L+ +A+I Sbjct: 72 -VQLFVIFYGLPHIGIV-------FDS-----------------FVAIIISLTLNFSAYI 106 Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341 +EI+RS +I++P+GQ +A+ A+GLT ++ R ++LPQ + + PL+S+++++LK++S+A Sbjct: 107 SEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVA 166 Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378 + ++ I++ T Q + I F+YL L+ Sbjct: 167 STITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203 >gi|152986551|ref|YP_001345801.1| ABC transporter permease [Pseudomonas aeruginosa PA7] gi|150961709|gb|ABR83734.1| probable permease of ABC transporter [Pseudomonas aeruginosa PA7] Length = 230 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 59/208 (28%), Positives = 104/208 (50%), Gaps = 26/208 (12%) Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252 S VLG+VL F+ + R + +Y+S F G P LV I + L++ P +G Sbjct: 39 SMVLGLVLG-FSVAVVRVTKVPLVSQIAAVYVSAF--RGTPLLVQI---FVLYYGLPSVG 92 Query: 253 -QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311 +F + +AL+ AA+++E +R ++ + +GQ EA +++GLT + Sbjct: 93 IEFTPVTAGI---------LALTLNVAAYLSESMRGAILGIDKGQWEAGLSVGLTWGQTL 143 Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371 ++ PQA+R +P L++ ++L+K++SL + +L+ +I +T Q + + L Sbjct: 144 WNIITPQALRLAVPSLSNSLISLIKDTSLISVITVTELMLATKEVIAETFQPLPLYLAAA 203 Query: 372 FIYLSLSIMIALF-------MNRLNAKI 392 IY LS ALF NRL A + Sbjct: 204 GIYWLLS---ALFERVQKALENRLTAPL 228 >gi|92114900|ref|YP_574828.1| amino acid ABC transporter permease [Chromohalobacter salexigens DSM 3043] gi|91797990|gb|ABE60129.1| amino acid ABC transporter membrane protein 1, PAAT family [Chromohalobacter salexigens DSM 3043] Length = 238 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 52/202 (25%), Positives = 89/202 (44%), Gaps = 28/202 (13%) Query: 204 ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY--------------QLHFDKP 249 + +LSRH + + LY T LI G+P LVL+ L + FD Sbjct: 38 SAKLSRH---RLLHRIATLY--TTLIRGVPDLVLMLLLFFGGQMGVNAITDWLYYQFDVD 92 Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309 + N EF++ + + A++ E R +AV GQ+EA A G++ R Sbjct: 93 IFININ---------EFVAGVVTIGFIFGAYMGETFRGAFLAVDSGQLEAGRAYGMSSRL 143 Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369 R + PQ MR +P L + ++ LLK ++L +G +D+V + T + ++ Sbjct: 144 IFRRIQFPQMMRHALPGLGNNWMVLLKTTALVSVIGLSDMVRIAAEATKATHEPFLFMIP 203 Query: 370 WMFIYLSLSIMIALFMNRLNAK 391 IYL ++ + + RL + Sbjct: 204 VAVIYLLIASVSEWGVARLQKR 225 >gi|49474413|ref|YP_032455.1| amino acid permease [Bartonella quintana str. Toulouse] gi|49239917|emb|CAF26315.1| Amino acid permease [Bartonella quintana str. Toulouse] Length = 238 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 38/139 (27%), Positives = 76/139 (54%), Gaps = 1/139 (0%) Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315 F+ G+++ +L I + + AA+ AEI+R+G+ +V +GQ A ALG+T+ + +V+ Sbjct: 99 FLTGTSIGVNKSAL-ITFTAFEAAYFAEIMRAGINSVSQGQKHAGQALGMTYWQNMYIVI 157 Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375 LPQA R ++P +Q + L ++++L A+ L++ + N G E ++ Y Sbjct: 158 LPQAFRDMLPVFLTQVIILFQDTTLVYAISGNSLLNGFDIVANNFGVKQEAYILAAIFYF 217 Query: 376 SLSIMIALFMNRLNAKIAL 394 + ++ + L KI++ Sbjct: 218 VICFTLSQIVLYLQKKISI 236 Score = 38.9 bits (89), Expect = 1.5, Method: Compositional matrix adjust. Identities = 21/61 (34%), Positives = 36/61 (59%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 IL G + + +L I I GTL+ RLS+ KL++W+ +Y+ R+IP ++VI + Sbjct: 34 ILSGLLFSVFLTLFATILGLIFGTLLAMMRLSSMKLLSWLAVIYIIAMRSIPLVMVILWF 93 Query: 149 Y 149 + Sbjct: 94 F 94 >gi|328463781|gb|EGF35338.1| amino acid ABC transporter permease [Lactobacillus helveticus MTCC 5463] Length = 225 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 53/193 (27%), Positives = 91/193 (47%), Gaps = 27/193 (13%) Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY-----QLHFDKPVLGQFNFIGGSTVS 263 R K + + +Y+ F I LP++VL+ L Y LH + P G+ ++ Sbjct: 47 RTMPNKIIRCILRVYMEIFRI--LPSVVLLYLVYYILPRSLHINWP---------GTWMA 95 Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323 +A S + AA ++IVR L +VP Q E+ +ALGL+ + VLLPQA + Sbjct: 96 ------VLAFSLWVAAEFSDIVRGALQSVPLAQKESGLALGLSKTQLFLYVLLPQAFKLE 149 Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM-----FIYLSLS 378 +P + ++K +S+ + + D+++VG II Q + W+ F Y L Sbjct: 150 LPATINLATRVIKTTSILMLISVMDVINVGQQIIEANNQKFPTGVFWVYGLIFFFYFILD 209 Query: 379 IMIALFMNRLNAK 391 ++++ L AK Sbjct: 210 YPLSVWAKSLMAK 222 Score = 45.4 bits (106), Expect = 0.015, Method: Compositional matrix adjust. Identities = 22/61 (36%), Positives = 38/61 (62%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 +LVG + W+A + +IGT+ G R NK++ I RVY+E+FR +P +V+++ + Sbjct: 18 LLVGLWTSIWIAALSIFIGLLIGTVFGVLRTMPNKIIRCILRVYMEIFRILPSVVLLYLV 77 Query: 149 Y 149 Y Sbjct: 78 Y 78 >gi|325697575|gb|EGD39460.1| amino acid ABC superfamily ATP binding cassette transporter, membrane protein [Streptococcus sanguinis SK160] Length = 225 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 39/144 (27%), Positives = 73/144 (50%), Gaps = 16/144 (11%) Query: 232 LPTLVLIALKY---QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288 +P LVL+ L Y +FD + G+ +S I S + A + ++VR Sbjct: 68 MPQLVLLFLVYFGLARNFDINISGE-------------LSAIIVFSLWGTAEMGDLVRGA 114 Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348 + ++P+ Q E+ ALGL+ R+ +++PQ +R ++P + ++K +SL V +G + Sbjct: 115 ITSLPKHQFESGQALGLSQRQLYVYIIIPQVLRRLLPQAINLITRMIKTTSLIVLIGVIE 174 Query: 349 LVSVGGTIINQTGQAIEIILIWMF 372 +V VG II+ +I W++ Sbjct: 175 VVKVGQQIIDSNRLSIPSAAFWIY 198 >gi|294674316|ref|YP_003574932.1| amino acid ABC transporter ATP-binding protein/permease [Prevotella ruminicola 23] gi|294473716|gb|ADE83105.1| amino acid ABC transporter, ATP-binding protein/permease protein, His/Glu/Gln/Arg/opine family [Prevotella ruminicola 23] Length = 911 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 47/183 (25%), Positives = 92/183 (50%), Gaps = 17/183 (9%) Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265 R++RH K + + YI L+ G P LVL+ L Y + ++ + G Sbjct: 58 RMNRH---KWLRHIASAYID--LMRGTPVLVLLMLMYYV-----LMAPIDATG------- 100 Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325 + + + TAA+I+E++R+ + + RGQ EA +ALG T R+ ++LPQ +++++P Sbjct: 101 IVVAIVTFALNTAAYISEMLRTSIQGIDRGQTEAGLALGYTQRQTFIRIILPQVVKAVMP 160 Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385 + ++LLK +S+ + D+ I ++T A +++ IY ++ +I + Sbjct: 161 VYQGEVISLLKGTSIVGYIAVNDMTRASDLIRSRTFDAFFPLIVTAIIYFLIAWLIGQLL 220 Query: 386 NRL 388 L Sbjct: 221 TAL 223 >gi|15890240|ref|NP_355912.1| ABC transporter, membrane spanning protein (amino acid) [Agrobacterium tumefaciens str. C58] gi|15158430|gb|AAK88697.1| ABC transporter, membrane spanning protein (amino acid) [Agrobacterium tumefaciens str. C58] Length = 230 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 43/147 (29%), Positives = 79/147 (53%), Gaps = 5/147 (3%) Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302 QL F VL +F V P F++ +AL AA+ +E+ R G+ AV GQ EAA A Sbjct: 78 QLFFLYYVLPEFGI-----VLPAFLTGALALGLQYAAYTSEVYRGGMEAVHHGQWEAATA 132 Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362 L LT + R +++PQA+ I+P + + + ++K + + V +++ + I +T + Sbjct: 133 LNLTRMQTYRDIIIPQAIPRIVPAMGNYLVAMIKETPVLSVVTVLEMMGLANMIGERTFE 192 Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLN 389 + + + I+L L+I+ + ++RL Sbjct: 193 YLVPLTLVGLIFLLLTIICSAGLSRLQ 219 Score = 37.0 bits (84), Expect = 5.2, Method: Compositional matrix adjust. Identities = 29/78 (37%), Positives = 40/78 (51%), Gaps = 6/78 (7%) Query: 89 ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148 IL+G T A +G A ++G + R S KL++W V VE R+ P LV +FFL Sbjct: 23 ILIGLTVTLKAAAAGFAIALVLGLVFALLRRSRVKLISWPTAVVVEFLRDTPLLVQLFFL 82 Query: 149 YKSVLSVLPIPDHSIVLP 166 Y +P+ IVLP Sbjct: 83 YYV------LPEFGIVLP 94 >gi|327394608|dbj|BAK12030.1| histidine transport system permease protein HisQ [Pantoea ananatis AJ13355] Length = 228 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 63/208 (30%), Positives = 96/208 (46%), Gaps = 26/208 (12%) Query: 193 SFVLGIVLSLFAT--RLSRHFHEKTGKALPLLYIS-TFLIFGLPTLVLIALK-YQLHF-- 246 S +L ++L L +LSR+ + L L++ T LI G+P LVL+ L Y L Sbjct: 23 SVLLAVILGLIGAGAKLSRN------RLLSLIFEGYTTLIRGVPDLVLMLLIFYGLQIAL 76 Query: 247 ----DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302 D L QF+ + P + I L A+ E R +AVP+GQ+EAA A Sbjct: 77 NHLTDALGLAQFD------IDPMVAGI-ITLGFIYGAYFTETFRGAFMAVPKGQIEAATA 129 Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362 G T + R +L P MR +P + + + +LK ++L +G D+V T Q Sbjct: 130 FGFTGSQVFRRILFPAMMRYALPGIGNNWQVILKATALVSLLGLEDVVKATQLAGKSTWQ 189 Query: 363 AIEIILIWMFIYL---SLSIMIALFMNR 387 ++ IYL +LS I ++NR Sbjct: 190 PFYFAIVAGVIYLVFTTLSNGILWWLNR 217 Score = 38.9 bits (89), Expect = 1.5, Method: Compositional matrix adjust. Identities = 25/67 (37%), Positives = 41/67 (61%), Gaps = 2/67 (2%) Query: 84 SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAG-RLSANKLVAWICRVYVEVFRNIPPL 142 Y+ IL G + T LA S ++ A I+G L+GAG +LS N+L++ I Y + R +P L Sbjct: 4 GYSDVILKGTLVTLELALSSVLLAVILG-LIGAGAKLSRNRLLSLIFEGYTTLIRGVPDL 62 Query: 143 VVIFFLY 149 V++ ++ Sbjct: 63 VLMLLIF 69 >gi|317053831|ref|YP_004117856.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea sp. At-9b] gi|316951826|gb|ADU71300.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea sp. At-9b] Length = 245 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 40/120 (33%), Positives = 66/120 (55%), Gaps = 1/120 (0%) Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318 G T+S F + +AL A+++E R+G+ +VP+GQ+EAA LG+ R+ V+LPQ Sbjct: 82 GITMS-AFTAGVLALGINVGAYLSETFRAGIQSVPKGQLEAAWILGIPRRQVFLSVVLPQ 140 Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378 A R++ P + + + LL +SL A+ +L I +T I+ + +YL LS Sbjct: 141 AARAVWPAIINNLIQLLLGTSLLSAIALPELTGTATVINARTLLYIQTFSVVALVYLLLS 200 >gi|10954822|ref|NP_053242.1| hypothetical protein pTi-SAKURA_p003 [Agrobacterium tumefaciens] gi|16119837|ref|NP_396542.1| ABC transporter, membrane spanning protein (nopaline) [Agrobacterium tumefaciens str. C58] gi|548381|sp|P35113|NOCM_AGRT5 RecName: Full=Nopaline transport system permease protein