HHsearch alignment for GI: 254780172 and conserved domain: PRK10952
>PRK10952 glycine betaine transporter membrane protein; Provisional.
Probab=99.51 E-value=5e-11 Score=85.05 Aligned_cols=237 Identities=14% Similarity=0.200 Sum_probs=148.3
Q ss_pred HCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 14305689999999999974000111233346899999889885133335741111110024787799999999999875
Q gi|254780172|r 115 QRWRPILVFLTGSILLTPMLIPSFPRKFLNSILLFGLFPIFSFFVLYGGLGLSIVETSLWGGLLVTLVISFFGIIISMPL 194 (386)
Q Consensus 115 e~WRv~la~ill~vll~~~l~~~~~~k~~~~l~~~~~~pil~~~Ll~gg~gl~~V~t~~~gGl~~Tl~l~~~~~~~~~~l 194 (386)
T Consensus 101 L~~~P~~~~i~~~~~law~~~----g~~l-a~~-----t~~~l~~I-~~-------~G~W~~aM~TLalvlvav~~~~ii 162 (354)
T PRK10952 101 LLGMPAPVAIIVFALIAWQIS----GVGM-GVA-----TLISLIAI-GA-------IGAWSQAMVTLALVLTALLFCIVI 162 (354)
T ss_pred HCCCCHHHHHHHHHHHHHHHC----CHHH-HHH-----HHHHHHHH-HH-------HCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 802988999999999999980----4799-999-----99999999-99-------663299999999999999999999
Q ss_pred HHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 67754441278688999789888876147228999999997664155887738799999999999899989999999984
Q gi|254780172|r 195 GILLALGRNSNIPVLRYACITFIELFRGVPLVTVLFMASIMLPLFLPDTWDVDKLLRALLGVSAFASAYIAEVLRGGLQS 274 (386)
Q Consensus 195 G~llal~r~s~~~~l~~~~~~~ie~~Rg~Pli~~lf~~~~~lp~~lp~g~~~~~~~~a~i~l~l~~aAy~aEi~Rggl~s 274 (386)
T Consensus 163 GiplGI~~-ars~r~~~il~PiLD~mQT~P~FV------YLiP~vmlFGiG---~vpaviAtviyAlpP~iR~T~lGir~ 232 (354)
T PRK10952 163 GLPLGIWL-ARSPRAAKIIRPLLDAMQTTPAFV------YLVPIVMLFGIG---NVPGVVVTIIFALPPIIRLTILGINQ 232 (354)
T ss_pred HHHHHHHH-HCCHHHHHHHHHHHHHHHCCHHHH------HHHHHHHHHCCC---CHHHHHHHHHHHCCHHHHHHHHHHHC
T ss_conf 99999999-746999999999998731130799------999999992797---14599999999735899999999960
Q ss_pred CCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
Q ss_conf 58667899999621689999999969989986200479999999612899999999999999997410100355136999
Q gi|254780172|r 275 ISKGQFEAANSLGLSYLQKMRLIIMPQVIKRVIPGIVNTFIGLFKDSSLISIINMFDLLGIVRVNFSESTWISSVTPTTG 354 (386)
Q Consensus 275 vp~GQ~EAA~alGls~~q~~~~IilPQAlr~~iP~l~n~~i~l~KdTsL~~~Ig~~el~~~~~~~~~~~~~~~~~~~~e~ 354 (386)
T Consensus 233 Vp~~viEAa~~~G~T~~Q~L~kVeLPlA~P~ImaGvNQtimlaLsMvVIAa~IGagGLG~~Vl~gi~~~d---~G~g--- 306 (354)
T PRK10952 233 VPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALSMVVIASMIAVGGLGQMVLRGIGRLD---MGLA--- 306 (354)
T ss_pred CCHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCC---HHHH---
T ss_conf 8888999999849998889898336024999999999999999999999999578866189999986224---3689---
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCC-CCCC
Q ss_conf 9999999999999999999999998433-7899
Q gi|254780172|r 355 LIFIGFVFWIFCFSISLYSVFIEKTLHK-GSKK 386 (386)
Q Consensus 355 y~~~a~iY~ii~~~ls~~~~~lE~rl~~-~~rR 386 (386)
T Consensus 307 -l~aGl~IVlLAIiLDRiTqa~g~~~r~~~~~~ 338 (354)
T PRK10952 307 -TVGGVGIVILAIILDRLTQAVGRDSRSRGNRR 338 (354)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
T ss_conf -99999999999999998898562000268861