HHsearch alignment for GI: 254780172 and conserved domain: PRK11365

>PRK11365 ssuC alkanesulfonate transporter permease subunit; Provisional.
Probab=99.61  E-value=2.6e-13  Score=98.80  Aligned_cols=197  Identities=17%  Similarity=0.230  Sum_probs=133.4

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCHH
Q ss_conf             11100247877999999999998756775444127868899978988887614722899999999766415588773879
Q gi|254780172|r  170 ETSLWGGLLVTLVISFFGIIISMPLGILLALGRNSNIPVLRYACITFIELFRGVPLVTVLFMASIMLPLFLPDTWDVDKL  249 (386)
Q Consensus       170 ~t~~~gGl~~Tl~l~~~~~~~~~~lG~llal~r~s~~~~l~~~~~~~ie~~Rg~Pli~~lf~~~~~lp~~lp~g~~~~~~  249 (386)
T Consensus        55 ~g~l~~~~~~Tl~r~~~Gf~l~~~~Gi~lGil~-g~~~~~~~~~~P~~~~l~~iP~ia~~Pl~ilwf------G~g~~~~  127 (263)
T PRK11365         55 SGELWQHLAISSWRALIGFSIGGSLGLILGLIS-GLSRWGERLLDTSIQMLRNVPHLALIPLVILWF------GIDESAK  127 (263)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHCHHHHHHHHCCHHHHHHHHHHHH------CCCCCHH
T ss_conf             845999999999999999999999999999999-986999987585999997657999999999997------1574204


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf             99999999998999899999999845866789999962168999999996998998620047999999961289999999
Q gi|254780172|r  250 LRALLGVSAFASAYIAEVLRGGLQSISKGQFEAANSLGLSYLQKMRLIIMPQVIKRVIPGIVNTFIGLFKDSSLISIINM  329 (386)
Q Consensus       250 ~~a~i~l~l~~aAy~aEi~Rggl~svp~GQ~EAA~alGls~~q~~~~IilPQAlr~~iP~l~n~~i~l~KdTsL~~~Ig~  329 (386)
T Consensus       128 i-~~i~~~~~--~pi~~nt~~Gv~~v~~~~~~~ar~~g~s~~~~l~~V~lP~alP~i~~glria~~~a~~~~v~aE~i~~  204 (263)
T PRK11365        128 I-FLVALGTL--FPIYINTWHGIRNIDRGLVEMARSYGLSGIPLFIHVILPGALPSIMVGVRFALGLMWLTLIVAETISA  204 (263)
T ss_pred             H-HHHHHHHH--HHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf             4-78865104--28899998887549999999998729999999999898006889999999999999999999999844


Q ss_pred             HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf             99999999974101003551369999999999999999999999999998433
Q gi|254780172|r  330 FDLLGIVRVNFSESTWISSVTPTTGLIFIGFVFWIFCFSISLYSVFIEKTLHK  382 (386)
Q Consensus       330 ~el~~~~~~~~~~~~~~~~~~~~e~y~~~a~iY~ii~~~ls~~~~~lE~rl~~  382 (386)
T Consensus       205 ~~--GLG~~i~~a~~----~~~~~~v~a~ii~i~llg~~l~~~~~~lerrll~  251 (263)
T PRK11365        205 NS--GIGYLAMNARE----FLQTDVVVVAIILYALLGKLADVSAQLLERLWLR  251 (263)
T ss_pred             CC--CHHHHHHHHHH----HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf             69--88899999998----7068899999999999999999999999999388