>TIGR00969 3a0106s02 sulfate ABC transporter, permease protein; InterPro: IPR005667 Bacterial binding protein-dependent transport systems , are multicomponent systems typically composed of a periplasmic substrate-binding protein, one or two reciprocally homologous integral inner-membrane proteins and one or two peripheral membrane ATP-binding proteins that couple energy to the active transport system. The integral inner-membrane proteins translocate the substrate across the membrane. It has been shown , that most of these proteins contain a conserved region located about 80 to 100 residues from their C-terminal extremity. This region seems to be located in a cytoplasmic loop between two transmembrane domains. Apart from the conserved region, the sequence of these proteins is quite divergent, and they have a variable number of transmembrane helices, This entry describes a subfamily of both CysT and CysW, paralogous and generally tandemly encoded permease proteins of the sulphate ABC transporter; GO: 0015563 uptake transmembrane transporter activity, 0006810 transport, 0016020 membrane.

Probab=97.86 E-value=1.6e-06 Score=58.06 Aligned_cols=157 Identities=18% Similarity=0.224 Sum_probs=101.3 Q ss_pred HHHHHHHHHHHCCCCCCCCCC-----CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCCHHHHHHHHHHHHHHCC Q ss_conf 999988988513333574111-----111002478779999999999987567754441-27868899978988887614 Q gi|254780172|r 149 FGLFPIFSFFVLYGGLGLSIV-----ETSLWGGLLVTLVISFFGIIISMPLGILLALGR-NSNIPVLRYACITFIELFRG 222 (386) Q Consensus 149 ~~~~pil~~~Ll~gg~gl~~V-----~t~~~gGl~~Tl~l~~~~~~~~~~lG~llal~r-~s~~~~l~~~~~~~ie~~Rg 222 (386) T Consensus 38 iL~lP~~~l~~~~f~~gl~~~~~~~tdP~~~~A~~lT~~~aliav~lN~vFG~~~AWvLtR~~F-PGr~lLda~~DLPFA 116 (280) T TIGR00969 38 ILLLPVIALFVQAFSKGLEQFWQNATDPNAVSAYNLTLLMALIAVPLNGVFGLLIAWVLTRYQF-PGRKLLDALIDLPFA 116 (280) T ss_pred HHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-CCHHHHHHHHHCCCC T ss_conf 9999999999999745988999984298899999999999999999999999999999971269-825899998621334 Q ss_pred CCHHHHHHHHHHHHHHHC-----------CCCCCCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHH Q ss_conf 722899999999766415-----------5887738-7999999999998999899999999845866789999962168 Q gi|254780172|r 223 VPLVTVLFMASIMLPLFL-----------PDTWDVD-KLLRALLGVSAFASAYIAEVLRGGLQSISKGQFEAANSLGLSY 290 (386) Q Consensus 223 ~Pli~~lf~~~~~lp~~l-----------p~g~~~~-~~~~a~i~l~l~~aAy~aEi~Rggl~svp~GQ~EAA~alGls~ 290 (386) T Consensus 117 lspvVA----GL~l~llYg~~Gw~G~~~~~fgiqI~F~~~G~~lAmiFvs~PFVvRev~PVL~Elg~e~EEAA~tLGA~~ 192 (280) T TIGR00969 117 LSPVVA----GLTLALLYGSNGWLGSWLASFGIQIIFTWPGVALAMIFVSLPFVVREVQPVLEELGTEAEEAAATLGASG 192 (280) T ss_pred CCHHHH----HHEEEEEECCCCCCCCHHHHCCCEEEEECCCEEEEEEEECCCCEEEEECCCHHHCCCCHHHHHHHCCCCC T ss_conf 250675----3300045357785113230178689984121466653421680454310013413855789998628998 Q ss_pred HHHHHHHHHHHHHHHHHCCH Q ss_conf 99999999699899862004 Q gi|254780172|r 291 LQKMRLIIMPQVIKRVIPGI 310 (386) Q Consensus 291 ~q~~~~IilPQAlr~~iP~l 310 (386) T Consensus 193 WQtFwRV~LP~i~w~llyGv 212 (280) T TIGR00969 193 WQTFWRVTLPSIRWALLYGV 212 (280) T ss_pred CEEEEEEECCCCCHHHHHHH T ss_conf 30267876688726788867

HHsearch alignment for GI: 254780172 and conserved domain: TIGR00969