HHsearch results for GI: 254780172 and protein with PDBid: 3dhw_A
>3dhw_A D-methionine transport system permease protein METI; ABC-transporter, methionine uptake transporter, membrane protein, amino-acid transport; 3.70A {Escherichia coli K12} SCOP: f.58.1.1
Probab=99.95 E-value=1.9e-27 Score=182.34 Aligned_cols=201 Identities=18% Similarity=0.262 Sum_probs=149.9
Q ss_pred CHHHHHHHHHHHHHHHHHHHHH----HHHHHHHC---CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 0247877999999999998756----77544412---7868899978988887614722899999999766415588773
Q gi|254780172|r 174 WGGLLVTLVISFFGIIISMPLG----ILLALGRN---SNIPVLRYACITFIELFRGVPLVTVLFMASIMLPLFLPDTWDV 246 (386)
Q Consensus 174 ~gGl~~Tl~l~~~~~~~~~~lG----~llal~r~---s~~~~l~~~~~~~ie~~Rg~Pli~~lf~~~~~lp~~lp~g~~~ 246 (386)
..|+..|+.+++.+.+++.++| ++++..|. ...+.+......+++++|++|.++.+++.....+... +...
T Consensus 10 l~~~~~Tl~~a~~~~~~~~~ig~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~--~~~~ 87 (217)
T 3dhw_A 10 VRGVWETLAMTFVSGFFGFVIGLPVGVLLYVTRPGQIIANAKLYRTVSAIVNIFRSIPFIILLVWMIPFTRVIV--GTSI 87 (217)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTGGGGGGGGGGTTCSSSCCSSHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHTT--CCSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHH
T ss_conf 99999999999999999999999999999998644432008999999999999999999999999999999998--6123
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
Q ss_conf 87999999999998999899999999845866789999962168999999996998998620047999999961289999
Q gi|254780172|r 247 DKLLRALLGVSAFASAYIAEVLRGGLQSISKGQFEAANSLGLSYLQKMRLIIMPQVIKRVIPGIVNTFIGLFKDSSLISI 326 (386)
Q Consensus 247 ~~~~~a~i~l~l~~aAy~aEi~Rggl~svp~GQ~EAA~alGls~~q~~~~IilPQAlr~~iP~l~n~~i~l~KdTsL~~~ 326 (386)
.+..++++.+++..+|+.+.+|+|++++|++|.|||+++|.|++|++++|++||+.+..++++.+.++..+||+++++.
T Consensus 88 -~~~~~ii~~~~~~~~~~~~~~~~~l~~i~~~~~eAA~~lGas~~q~f~~vilP~~~p~ii~~~~~~~~~~i~~~~i~~~ 166 (217)
T 3dhw_A 88 -GLQAAIVPLTVGAAPFIARMVENALLEIPTGLIEASRAMGATPMQIVRKVLLPEALPGLVNAATITLITLVGYSAMGGA 166 (217)
T ss_dssp -SHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTTTTHHHHHTCCTHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHCCS
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf -6999999999986799999999999858989999987189898999697419978999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999974101003551369999999999999999999999999998
Q gi|254780172|r 327 INMFDLLGIVRVNFSESTWISSVTPTTGLIFIGFVFWIFCFSISLYSVFIEKT 379 (386)
Q Consensus 327 Ig~~el~~~~~~~~~~~~~~~~~~~~e~y~~~a~iY~ii~~~ls~~~~~lE~r 379 (386)
+|..|+.........+.. + ............++++++++..++..|++|||
T Consensus 167 ig~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~rR 217 (217)
T 3dhw_A 167 VGAGGLGQIGYQYGYIGY-N-ATVMNTVLVLLVILVYLIQFAGDRIVRAVTRK 217 (217)
T ss_dssp TTCCHHHHHHHHHHHSSC-C-TTHHHHHHHHHHHHHHHHHHHCC---------
T ss_pred HHHHHHHHHHHHHHHHHH-H-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 988799999999999860-0-89999999999999999999999999975699