HHSEARCH alignment of GI: 254780172 and SCOP domain: d2onkc1

Alignment
>d2onkc1 f.58.1.1 (C:1-252) Molybdate/tungstate transport system permease protein WtpB (ModB) {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=99.74  E-value=1.3e-16  Score=115.79  Aligned_cols=162  Identities=14%  Similarity=0.221  Sum_probs=130.0

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH-----CCCC
Q ss_conf             111002478779999999999987567754441-2786889997898888761472289999999976641-----5588
Q gi|254780172|r  170 ETSLWGGLLVTLVISFFGIIISMPLGILLALGR-NSNIPVLRYACITFIELFRGVPLVTVLFMASIMLPLF-----LPDT  243 (386)
Q Consensus       170 ~t~~~gGl~~Tl~l~~~~~~~~~~lG~llal~r-~s~~~~l~~~~~~~ie~~Rg~Pli~~lf~~~~~lp~~-----lp~g  243 (386)
                      +...|..+..|+.+++.+.++++++|+.+|+.- +.+.+ .|........+..-+|.++.-+.....+...     ....
T Consensus        44 ~~~~~~~~~nSl~~~~~~~~i~~i~g~~la~~l~~~~~~-~~~~~~~~~~~p~~ip~~v~~~~~~~~~~~~~~~~~~~~~  122 (252)
T d2onkc1          44 DPAVWKVVLTTYYAALISTLIAVIFGTPLAYILARKSFP-GKSVVEGIVDLPVVIPHTVAGIALLVVFGSSGLIGSFSPL  122 (252)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCS-SHHHHHHHHHHHHHSCHHHHHHHHHHHHSTTSTTTTTCSS
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-HHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCC
T ss_conf             978999999999999999999999999999999873132-1689999987521687177777776412332100012454


Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
Q ss_conf             77387999999999998999899999999845866789999962168999999996998998620047999999961289
Q gi|254780172|r  244 WDVDKLLRALLGVSAFASAYIAEVLRGGLQSISKGQFEAANSLGLSYLQKMRLIIMPQVIKRVIPGIVNTFIGLFKDSSL  323 (386)
Q Consensus       244 ~~~~~~~~a~i~l~l~~aAy~aEi~Rggl~svp~GQ~EAA~alGls~~q~~~~IilPQAlr~~iP~l~n~~i~l~KdTsL  323 (386)
                      ...+.....+++.+....+|...++++|++++|+++.|||+++|.|++|++++|++|++.+..+.+..-.++..+||.+.
T Consensus       123 ~~~~~~~~iii~~~~~~~p~~~~~~~~~~~~i~~~~~eaA~~lGas~~~~~~~i~lP~~~p~i~~~~~l~~~~~~~~~~~  202 (252)
T d2onkc1         123 KFVDALPGIVVAMLFVSVPIYINQAKEGFASVDVRLEHVARTLGSSPLRVFFTVSLPLSVRHIVAGAIMSWARGISEFGA  202 (252)
T ss_dssp             CCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHTTCCHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHCCHH
T ss_pred             CCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             42001332110100112110368999999750388887887669983325469870876889999999999889999888


Q ss_pred             HHHHHHHHH
Q ss_conf             999999999
Q gi|254780172|r  324 ISIINMFDL  332 (386)
Q Consensus       324 ~~~Ig~~el  332 (386)
                      ...+|-.+-
T Consensus       203 ~~~~~~~~~  211 (252)
T d2onkc1         203 VVVIAYYPM  211 (252)
T ss_dssp             HHTTCCSSC
T ss_pred             HHHHCCCCC
T ss_conf             751148985


SCOP domain information

class: Membrane and cell surface proteins and peptides
fold: MetI-like
superfamily: MetI-like
family: MetI-like
domain: Molybdate/tungstate transport system permease protein WtpB (ModB)
species: Archaeoglobus fulgidus [TaxId: 2234]