HHSEARCH alignment of GI: 254780172 and SCOP domain: d2r6gf2

Alignment
>d2r6gf2 f.58.1.1 (F:261-504) Maltose transport system permease protein MalF {Escherichia coli [TaxId: 562]}
Probab=99.45  E-value=9.4e-13  Score=92.69  Aligned_cols=156  Identities=17%  Similarity=0.206  Sum_probs=116.5

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH-HH------HC--CCC
Q ss_conf             0024787799999999999875677544412786889997898888761472289999999976-64------15--588
Q gi|254780172|r  173 LWGGLLVTLVISFFGIIISMPLGILLALGRNSNIPVLRYACITFIELFRGVPLVTVLFMASIML-PL------FL--PDT  243 (386)
Q Consensus       173 ~~gGl~~Tl~l~~~~~~~~~~lG~llal~r~s~~~~l~~~~~~~ie~~Rg~Pli~~lf~~~~~l-p~------~l--p~g  243 (386)
                      .|.-+..|+..++.+.+++.++|..+|..-..+....|......+-+-.-+|.++.-+.....+ |.      .+  ..+
T Consensus        17 ~~~~l~~t~~~~~~~~~~~~~~~~~lA~~l~~~~~~~~~~~~~~~~~p~~ip~~v~~~~~~~~~~~~~g~~~~~l~~~~~   96 (244)
T d2r6gf2          17 FLAIFVWTVVFSLITVFLTVAVGMVLACLVQWEALRGKAVYRVLLILPYAVPSFISILIFKGLFNQSFGEINMMLSALFG   96 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSSTTHHHHHHHTTHHHHSCHHHHHHHHHHHTCSSSSHHHHHHHHTSS
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCC
T ss_conf             99999999999999999999999999999984742047899999999998408899999999875235514666655302


Q ss_pred             CCC-------CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHH
Q ss_conf             773-------8799999999999899989999999984586678999996216899999999699899862004799999
Q gi|254780172|r  244 WDV-------DKLLRALLGVSAFASAYIAEVLRGGLQSISKGQFEAANSLGLSYLQKMRLIIMPQVIKRVIPGIVNTFIG  316 (386)
Q Consensus       244 ~~~-------~~~~~a~i~l~l~~aAy~aEi~Rggl~svp~GQ~EAA~alGls~~q~~~~IilPQAlr~~iP~l~n~~i~  316 (386)
                      ...       ......+++......+|..-++++++++||+.++|||+..|-|+||++|+|++|+.....+...+-.++.
T Consensus        97 ~~~~~~~~~~~~~~~i~i~~v~~~~p~~~l~~~~~l~~I~~~l~EAA~idGAs~~~~f~~I~lPl~~p~i~~~~il~fi~  176 (244)
T d2r6gf2          97 VKPAWFSDPTTARTMLIIVNTWLGYPYMMILCMGLLKAIPDDLYEASAMDGAGPFQNFFKITLPLLIKPLTPLMIASFAF  176 (244)
T ss_dssp             CCCCTTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGSCTHHHHHHHHTCCCSHHHHHHTTGGGTHHHHHHHHHHHHHH
T ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHHHH
T ss_conf             67741012779999999999997102779999999975999998999974997657749998544689999999999999


Q ss_pred             HHHHHHHHHHHH
Q ss_conf             996128999999
Q gi|254780172|r  317 LFKDSSLISIIN  328 (386)
Q Consensus       317 l~KdTsL~~~Ig  328 (386)
                      .+||-....+++
T Consensus       177 ~~~~f~~~~~l~  188 (244)
T d2r6gf2         177 NFNNFVLIQLLT  188 (244)
T ss_dssp             HHTCHHHHHHHC
T ss_pred             HCCHHHHHHHHC
T ss_conf             720056764425


SCOP domain information

class: Membrane and cell surface proteins and peptides
fold: MetI-like
superfamily: MetI-like
family: MetI-like
domain: Maltose transport system permease protein MalF
species: Escherichia coli [TaxId: 562]