BLAST/PSIBLAST alignment of GI: 254780172 and GI: 116251958 at iteration 1
>gi|116251958|ref|YP_767796.1| general L-amino acid transport system permease protein [Rhizobium leguminosarum bv. viciae 3841] Length = 384
>gi|3182889|sp|Q52814|AAPM_RHIL3 RecName: Full=General L-amino acid transport system permease protein AapM Length = 384
>gi|1154896|emb|CAA57935.1| general amino acid ABC type transporter [Rhizobium leguminosarum] Length = 384
>gi|115256606|emb|CAK07694.1| General L-amino acid transport system permease protein [Rhizobium leguminosarum bv. viciae 3841] Length = 384
Score = 505 bits (1301), Expect = e-141, Method: Compositional matrix adjust.
Identities = 238/383 (62%), Positives = 304/383 (79%)
Query: 4 SCKEFPYVRKRLLQPSLPPVYQRGIIAWIHKNFFGTPKDILLTALIICLLLFSIPGIIHW 63
S + P+VR +L PP +RG +AWI +N TPKD++LT L + L+ +++P +++W
Sbjct: 2 SVADKPFVRTSILAAEPPPPGERGAVAWIRRNLLATPKDVILTILALALIAWAVPHLVNW 61
Query: 64 VFLDAVWIGSNRTVCTTVSQGGIQPDGWNAACWAFIYDRYEQFIFGNYPMAQRWRPILVF 123
+F+ AVW G +RT C T QGGIQPDGW+ ACWAFI +Y+QFIFG YP+ +RWRP +V
Sbjct: 62 LFIQAVWSGPDRTFCATTLQGGIQPDGWSGACWAFISAKYDQFIFGRYPLGERWRPAIVG 121
Query: 124 LTGSILLTPMLIPSFPRKFLNSILLFGLFPIFSFFVLYGGLGLSIVETSLWGGLLVTLVI 183
+ +LL PMLIPS PRK LN+ILLF + P+ +F++L+GG GL +VET LWGGL+VTLV+
Sbjct: 122 ILFILLLVPMLIPSAPRKGLNAILLFAVLPVIAFWLLHGGFGLEVVETPLWGGLMVTLVL 181
Query: 184 SFFGIIISMPLGILLALGRNSNIPVLRYACITFIELFRGVPLVTVLFMASIMLPLFLPDT 243
SF GI +S+P+GILLALGR S +PV+R C+TFIE+ RGVPL+TVLFMAS+MLPLFLP
Sbjct: 182 SFVGIAVSLPVGILLALGRRSRMPVIRMLCVTFIEVIRGVPLITVLFMASVMLPLFLPTG 241
Query: 244 WDVDKLLRALLGVSAFASAYIAEVLRGGLQSISKGQFEAANSLGLSYLQKMRLIIMPQVI 303
W+VDKLLRAL+GVS F SAY+AEV+RGGLQ+I KGQFE A+SLGL Y QK RLIIMPQ I
Sbjct: 242 WNVDKLLRALIGVSIFTSAYMAEVIRGGLQAIPKGQFEGADSLGLGYWQKTRLIIMPQAI 301
Query: 304 KRVIPGIVNTFIGLFKDSSLISIINMFDLLGIVRVNFSESTWISSVTPTTGLIFIGFVFW 363
K VIP IVNTFIG FKD+SL++II MFDLLGIV++NFS++ W S+VTP TGLIF GF+FW
Sbjct: 302 KLVIPSIVNTFIGTFKDTSLVTIIGMFDLLGIVKLNFSDANWASAVTPITGLIFAGFIFW 361
Query: 364 IFCFSISLYSVFIEKTLHKGSKK 386
+FCF +S YS F+E+ L G K+
Sbjct: 362 LFCFGMSRYSGFMERHLDTGHKR 384