RPSBLAST alignment for GI: 254780172 and conserved domain: pfam00528
>gnl|CDD|144205 pfam00528, BPD_transp_1, Binding-protein-dependent transport system inner membrane component. The alignments cover the most conserved region of the proteins, which is thought to be located in a cytoplasmic loop between two transmembrane domains. The members of this family have a variable number of transmembrane helices. Length = 183
Score = 54.2 bits (131), Expect = 6e-08
Identities = 38/189 (20%), Positives = 75/189 (39%), Gaps = 11/189 (5%)
Query: 191 SMPLGILLALGRNSNIPVLRYACITFIELFRGVPLVTVLFMASIMLPLFLPDTWDVDKLL 250
+PLGI+ AL R L I+L + +P VL + +++ + + L
Sbjct: 1 GIPLGIIAALRRGR---RLDRLLRPLIDLLQALPSF-VLAILLVVISILSILGHGI---L 53
Query: 251 RALLGVSAFASAYIAEVLRGGLQSISKGQFEAANSLGLSYLQKMRLIIMPQVIKRVIPGI 310
A++ + Y + R L+S+ EAA +LG S Q R II+P + ++ G+
Sbjct: 54 PAIILALLGWAGYARLIRRAALRSLPSDLVEAARALGASRWQIFRKIILPNALPPILTGL 113
Query: 311 VNTFIGLFKDSSLISIINMFDLLGIVRVNFSESTWISSVTPTTGL-IFIGFVFWIFCFSI 369
F G + L+ + + LG++ E+ G + + + +
Sbjct: 114 ALAFGGALGGAVLLEFLGSWPGLGLL---LIEAILGYDYPEIQGPVLAAALILLLLNLLV 170
Query: 370 SLYSVFIEK 378
+ ++
Sbjct: 171 DILQRLLDP 179