RPSBLAST alignment for GI: 254780173 and conserved domain: TIGR01188

>gnl|CDD|130256 TIGR01188, drrA, daunorubicin resistance ABC transporter ATP-binding subunit. This model describes daunorubicin resistance ABC transporter, ATP binding subunit in bacteria and archaea. This model is restricted in its scope to preferentially recognize the ATP binding subunit associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc. Length = 302
 Score =  156 bits (396), Expect = 5e-39
 Identities = 74/215 (34%), Positives = 121/215 (56%), Gaps = 6/215 (2%)

Query: 25  KWYGNFHALRDINLNVLRGERVIIAGPSGSGKSTLIRCINHIEKHQAGEIIINGIPLNDD 84
           K YG+F A+  +N  V  GE     GP+G+GK+T IR +  + +  +G   + G    D 
Sbjct: 1   KVYGDFKAVDGVNFKVREGEVFGFLGPNGAGKTTTIRMLTTLLRPTSGTARVAGY---DV 57

Query: 85  IRNIHEVRRDVGMVFQHFNLFSNLSVLENCTL-GPIWVRKMPKKDAEELAMHYLNKVKIA 143
           +R   +VRR +G+V Q+ ++  +L+  EN  + G ++   +PK +AEE A   L   ++ 
Sbjct: 58  VREPRKVRRSIGIVPQYASVDEDLTGRENLEMMGRLY--GLPKDEAEERAEELLELFELG 115

Query: 144 DKSHRSSSLLSGGESQRAAIARSLCMQPKIMLFDEPTSALDPEMVKEVLDIMIELAEEGM 203
           + + R     SGG  +R  IA SL  QP ++  DEPT+ LDP   + + D +  L EEG+
Sbjct: 116 EAADRPVGTYSGGMRRRLDIAASLIHQPDVLFLDEPTTGLDPRTRRAIWDYIRALKEEGV 175

Query: 204 TMVCVTHEMGFARQVADRVVFMDQGQIVEQNSPEE 238
           T++  TH M  A ++ DR+  +D G+I+ + +PEE
Sbjct: 176 TILLTTHYMEEADKLCDRIAIIDHGRIIAEGTPEE 210