RPSBLAST alignment for GI: 254780173 and conserved domain: TIGR01257

>gnl|CDD|130324 TIGR01257, rim_protein, retinal-specific rim ABC transporter. This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease. Length = 2272

 Score = 77.0 bits (189), Expect = 5e-15
 Identities = 54/204 (26%), Positives = 103/204 (50%), Gaps = 13/204 (6%)

Query: 38   LNVLRGERVIIA--GPSGSGKSTLIRCINHIEKHQAGEIIINGIPLNDDIRNIHEVRRDV 95
            LN+   E  I A  G +G+GK+T +  +  +    +G +++ G    D   N+  VR+ +
Sbjct: 949  LNITFYENQITAFLGHNGAGKTTTLSILTGLLPPTSGTVLVGG---KDIETNLDAVRQSL 1005

Query: 96   GMVFQHFNLFSNLSVLENCTLGPIWVRKMPKKDAEELAMHY---LNKVKIADKSHRSSSL 152
            GM  QH  LF +L+V E+     ++  ++  +  EE  +     L    +  K +  +  
Sbjct: 1006 GMCPQHNILFHHLTVAEHI----LFYAQLKGRSWEEAQLEMEAMLEDTGLHHKRNEEAQD 1061

Query: 153  LSGGESQRAAIARSLCMQPKIMLFDEPTSALDPEMVKEVLDIMIELAEEGMTMVCVTHEM 212
            LSGG  ++ ++A +     K+++ DEPTS +DP   + + D++++    G T++  TH M
Sbjct: 1062 LSGGMQRKLSVAIAFVGDAKVVVLDEPTSGVDPYSRRSIWDLLLKY-RSGRTIIMSTHHM 1120

Query: 213  GFARQVADRVVFMDQGQIVEQNSP 236
              A  + DR+  + QG++    +P
Sbjct: 1121 DEADLLGDRIAIISQGRLYCSGTP 1144