RPSBLAST alignment for GI: 254780173 and conserved domain: TIGR03415
>gnl|CDD|132456 TIGR03415, ABC_choXWV_ATP, choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines. Length = 382
Score = 122 bits (308), Expect = 9e-29
Identities = 72/233 (30%), Positives = 126/233 (54%), Gaps = 8/233 (3%)
Query: 28 GNFHALRDINLNVLRGERVIIAGPSGSGKSTLIRCINHIEKHQAGEIII---NGI--PLN 82
G + + +L++ GE ++ G SGSGKS+L+R +N + G +++ +G N
Sbjct: 35 GLVVGVANASLDIEEGEICVLMGLSGSGKSSLLRAVNGLNPVSRGSVLVKDGDGSIDVAN 94
Query: 83 DDIRNIHEVRRD-VGMVFQHFNLFSNLSVLENCTLGPIWVRKMPKKDAEELAMHYLNKVK 141
D + +R V MVFQ F L L+V EN G + ++ MP+ + + L V
Sbjct: 95 CDAATLRRLRTHRVSMVFQKFALMPWLTVEENVAFG-LEMQGMPEAERRKRVDEQLELVG 153
Query: 142 IADKSHRSSSLLSGGESQRAAIARSLCMQPKIMLFDEPTSALDPEMVKEVLDIMIELAEE 201
+A + + LSGG QR +AR+ M I+L DEP SALDP + ++ D ++EL +
Sbjct: 154 LAQWADKKPGELSGGMQQRVGLARAFAMDADILLMDEPFSALDPLIRTQLQDELLELQAK 213
Query: 202 -GMTMVCVTHEMGFARQVADRVVFMDQGQIVEQNSPEEFFNNPQHERTQAFLS 253
T++ V+H++ A ++ +R+ M+ G+I++ +PEE NP ++ F++
Sbjct: 214 LNKTIIFVSHDLDEALKIGNRIAIMEGGRIIQHGTPEEIVLNPANDYVADFVA 266