RPSBLAST alignment for GI: 254780173 and conserved domain: COG4988

>gnl|CDD|34593 COG4988, CydD, ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]. Length = 559
 Score =  143 bits (363), Expect = 3e-35
 Identities = 76/244 (31%), Positives = 121/244 (49%), Gaps = 11/244 (4%)

Query: 1   MKNTPINSKNPPKNNFAVEIKFLN---KWYGNFHALRDINLNVLRGERVIIAGPSGSGKS 57
           +       K    N   +EI   N   ++     AL D+NL +  G+   + G SG+GKS
Sbjct: 302 VATPGSGEKAEVANEPPIEISLENLSFRYPDGKPALSDLNLTIKAGQLTALVGASGAGKS 361

Query: 58  TLIRCINHIEKHQAGEIIINGIPLNDDIRNIHEVRRDVGMVFQHFNLFSNLSVLENCTLG 117
           TL+  +        GEI +NGI L D   +    R+ +  V Q+  LF+  ++ EN  L 
Sbjct: 362 TLLNLLLGFLAPTQGEIRVNGIDLRD--LSPEAWRKQISWVSQNPYLFAG-TIRENILLA 418

Query: 118 PIWVRKMPKKDAEELA--MHYLNKVKIADKS-HRSSSLLSGGESQRAAIARSLCMQPKIM 174
                      A + A  + ++ K    D       + LSGG++QR A+AR+L     ++
Sbjct: 419 RPDASDEEIIAALDQAGLLEFVPKPDGLDTVIGEGGAGLSGGQAQRLALARALLSPASLL 478

Query: 175 LFDEPTSALDPEMVKEVLDIMIELAEEGMTMVCVTHEMGFARQVADRVVFMDQGQIVEQN 234
           L DEPT+ LD E  + +L  + ELA++  T++ +TH +  A   ADR+V +D G++VEQ 
Sbjct: 479 LLDEPTAHLDAETEQIILQALQELAKQ-KTVLVITHRLEDAAD-ADRIVVLDNGRLVEQG 536

Query: 235 SPEE 238
           + EE
Sbjct: 537 THEE 540