RPSBLAST alignment for GI: 254780173 and conserved domain: cd03228
>gnl|CDD|72987 cd03228, ABCC_MRP_Like, The MRP (Mutidrug Resistance Protein)-like transporters are involved in drug, peptide, and lipid export. They belong to the subfamily C of the ATP-binding cassette (ABC) superfamily of transport proteins. The ABCC subfamily contains transporters with a diverse functional spectrum that includes ion transport, cell surface receptor, and toxin secretion activities. The MRP-like family, simlar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains, each composed of six transmembrane (TM) helices, and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.. Length = 171
Score = 143 bits (362), Expect = 6e-35
Identities = 66/198 (33%), Positives = 104/198 (52%), Gaps = 43/198 (21%)
Query: 32 ALRDINLNVLRGERVIIAGPSGSGKSTLIRCINHIEKHQAGEIIINGIPLNDDIRNIHEV 91
L+D++L + GE+V I GPSGSGKSTL++ + + +GEI+I+G+ L D ++ +
Sbjct: 17 VLKDVSLTIKPGEKVAIVGPSGSGKSTLLKLLLRLYDPTSGEILIDGVDLRDL--DLESL 74
Query: 92 RRDVGMVFQHFNLFSNLSVLENCTLGPIWVRKMPKKDAEELAMHYLNKVKIADKSHRSSS 151
R+++ V Q LFS ++ EN
Sbjct: 75 RKNIAYVPQDPFLFSG-TIREN-------------------------------------- 95
Query: 152 LLSGGESQRAAIARSLCMQPKIMLFDEPTSALDPEMVKEVLDIMIELAEEGMTMVCVTHE 211
+LSGG+ QR AIAR+L P I++ DE TSALDPE +L+ + LA +G T++ + H
Sbjct: 96 ILSGGQRQRIAIARALLRDPPILILDEATSALDPETEALILEALRALA-KGKTVIVIAHR 154
Query: 212 MGFARQVADRVVFMDQGQ 229
+ R ADR++ +D G+
Sbjct: 155 LSTIRD-ADRIIVLDDGR 171