RPSBLAST alignment for GI: 254780173 and conserved domain: cd03233
>gnl|CDD|72992 cd03233, ABC_PDR_domain1, The pleiotropic drug resistance (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.. Length = 202
Score = 66.4 bits (162), Expect = 7e-12
Identities = 49/204 (24%), Positives = 87/204 (42%), Gaps = 32/204 (15%)
Query: 33 LRDINLNVLRGERVIIAGPSGSGKSTLIRCI-NHIEKHQA--GEIIINGIPLNDDIRNIH 89
L+D + V GE V++ G GSG STL++ + N E + + G+I NGIP + +
Sbjct: 23 LKDFSGVVKPGEMVLVLGRPGSGCSTLLKALANRTEGNVSVEGDIHYNGIP-YKEFAEKY 81
Query: 90 EVRRDVGMVFQHFNLFSNLSVLENCTLGPIWVRKMPKKDAEELAMHYLNKVKIADKSHRS 149
++ V + F L+V E TL + K +
Sbjct: 82 --PGEIIYVSEEDVHFPTLTVRE--TL----------------------DFALRCKGNEF 115
Query: 150 SSLLSGGESQRAAIARSLCMQPKIMLFDEPTSALDPEMVKEVLDIMIELAEE--GMTMVC 207
+SGGE +R +IA +L + ++ +D T LD E+L + +A+ T V
Sbjct: 116 VRGISGGERKRVSIAEALVSRASVLCWDNSTRGLDSSTALEILKCIRTMADVLKTTTFVS 175
Query: 208 VTHEMGFARQVADRVVFMDQGQIV 231
+ + D+V+ + +G+ +
Sbjct: 176 LYQASDEIYDLFDKVLVLYEGRQI 199