RPSBLAST alignment for GI: 254780173 and conserved domain: cd03237

>gnl|CDD|72996 cd03237, ABC_RNaseL_inhibitor_domain2, The ATPase domain 2 of RNase L inhibitor. The ABC ATPase, RNase L inhibitor (RLI), is a key enzyme in ribosomal biogenesis, formation of translation preinitiation complexes, and assembly of HIV capsids. RLI's are not transport proteins and thus cluster with a group of soluble proteins that lack the transmembrane components commonly found in other members of the family. Structurally, RLI's have an N-terminal Fe-S domain and two nucleotide-binding domains which are arranged to form two composite active sites in their interface cleft. RLI is one of the most conserved enzymes between archaea and eukaryotes with a sequence identity of more than 48%. The high degree of evolutionary conservation suggests that RLI performs a central role in archaeal and eukaryotic physiology.. Length = 246
 Score = 64.9 bits (158), Expect = 2e-11
 Identities = 53/208 (25%), Positives = 86/208 (41%), Gaps = 25/208 (12%)

Query: 22  FLNKWYGNFHALRDINLNVLRGERVIIAGPSGSGKSTLIRCINHIEKHQAGEIIINGIPL 81
            + K  G F  L     ++   E + I GP+G GK+T I+ +  + K   G+I    I L
Sbjct: 5   TMKKTLGEFT-LEVEGGSISESEVIGILGPNGIGKTTFIKMLAGVLKPDEGDI---EIEL 60

Query: 82  NDDIRNIHEVRRDVGMVFQHFNLFSNLSVLENCTLGPIWVRKMPKKDAEELAMHYLNKVK 141
           +        ++ D     +   L S   + ++    P +  ++               ++
Sbjct: 61  DTVSYKPQYIKADYEGTVRDL-LSS---ITKDFYTHPYFKTEI------------AKPLQ 104

Query: 142 IADKSHRSSSLLSGGESQRAAIARSLCMQPKIMLFDEPTSALDPE---MVKEVLDIMIEL 198
           I     R    LSGGE QR AIA  L     I L DEP++ LD E   M  +V+    E 
Sbjct: 105 IEQILDREVPELSGGELQRVAIAACLSKDADIYLLDEPSAYLDVEQRLMASKVIRRFAEN 164

Query: 199 AEEGMTMVCVTHEMGFARQVADRVVFMD 226
            E+  T   V H++     +ADR++  +
Sbjct: 165 NEK--TAFVVEHDIIMIDYLADRLIVFE 190