>gnl|CDD|73053 cd03294, ABC_Pro_Gly_Bertaine, This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.. Length = 269

Score = 187 bits (476), Expect = 3e-48 Identities = 84/229 (36%), Positives = 135/229 (58%), Gaps = 8/229 (3%) Query: 28 GNFHALRDINLNVLRGERVIIAGPSGSGKSTLIRCINHIEKHQAGEIIINGIPLN----D 83 G + D++L+V GE +I G SGSGKSTL+RCIN + + +G+++I+G + Sbjct: 35 GQTVGVNDVSLDVREGEIFVIMGLSGSGKSTLLRCINRLIEPTSGKVLIDGQDIAAMSRK 94 Query: 84 DIRNIHEVRRDVGMVFQHFNLFSNLSVLENCTLGPIWVRKMPKKDAEELAMHYLNKVKIA 143 ++R + R+ + MVFQ F L + +VLEN G + V+ +P+ + EE A L V + Sbjct: 95 ELRELR--RKKISMVFQSFALLPHRTVLENVAFG-LEVQGVPRAEREERAAEALELVGLE 151 Query: 144 DKSHRSSSLLSGGESQRAAIARSLCMQPKIMLFDEPTSALDPEMVKEVLDIMIEL-AEEG 202 H+ LSGG QR +AR+L + P I+L DE SALDP + +E+ D ++ L AE Sbjct: 152 GWEHKYPDELSGGMQQRVGLARALAVDPDILLMDEAFSALDPLIRREMQDELLRLQAELQ 211 Query: 203 MTMVCVTHEMGFARQVADRVVFMDQGQIVEQNSPEEFFNNPQHERTQAF 251 T+V +TH++ A ++ DR+ M G++V+ +PEE NP ++ + F Sbjct: 212 KTIVFITHDLDEALRLGDRIAIMKDGRLVQVGTPEEILTNPANDYVREF 260

RPSBLAST alignment for GI: 254780173 and conserved domain: cd03294