BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= gi|254780174|ref|YP_003064587.1| putative oxidoreductase protein [Candidatus Liberibacter asiaticus str. psy62] (78 letters) Database: nr 13,984,884 sequences; 4,792,584,752 total letters Searching..................................................done Results from round 1 >gi|254780174|ref|YP_003064587.1| putative oxidoreductase protein [Candidatus Liberibacter asiaticus str. psy62] gi|254039851|gb|ACT56647.1| putative oxidoreductase protein [Candidatus Liberibacter asiaticus str. psy62] Length = 78 Score = 163 bits (413), Expect = 7e-39, Method: Compositional matrix adjust. Identities = 78/78 (100%), Positives = 78/78 (100%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK Sbjct: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 Query: 61 ELSYQRNFSYDRLEPWTH 78 ELSYQRNFSYDRLEPWTH Sbjct: 61 ELSYQRNFSYDRLEPWTH 78 >gi|315122677|ref|YP_004063166.1| putative oxidoreductase protein [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313496079|gb|ADR52678.1| putative oxidoreductase protein [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 103 Score = 128 bits (321), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 62/78 (79%), Positives = 67/78 (85%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +LEFE+ PYIEPLLGYTSSKDTLQQVKLFF SLE AEKYA DH IQY VIP KESQK Sbjct: 26 VLEFERQIAPYIEPLLGYTSSKDTLQQVKLFFLSLEEAEKYAKDHEIQYHVIPLHKESQK 85 Query: 61 ELSYQRNFSYDRLEPWTH 78 ++SYQ NFSY+RLEPWTH Sbjct: 86 KISYQNNFSYNRLEPWTH 103 >gi|15965469|ref|NP_385822.1| putative oxidoreductase protein [Sinorhizobium meliloti 1021] gi|307302590|ref|ZP_07582346.1| ETC complex I subunit conserved region [Sinorhizobium meliloti BL225C] gi|307318436|ref|ZP_07597870.1| ETC complex I subunit conserved region [Sinorhizobium meliloti AK83] gi|15074650|emb|CAC46295.1| Probable NADH-ubiquinone oxidoreductase [Sinorhizobium meliloti 1021] gi|306895776|gb|EFN26528.1| ETC complex I subunit conserved region [Sinorhizobium meliloti AK83] gi|306902954|gb|EFN33545.1| ETC complex I subunit conserved region [Sinorhizobium meliloti BL225C] Length = 101 Score = 84.7 bits (208), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 38/78 (48%), Positives = 54/78 (69%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +LEF++ P I+P++GYTSS DT QQV+L F S E A YA +GI+Y VI ++K Sbjct: 24 VLEFDQERPRTIDPIMGYTSSADTRQQVRLTFESAEQAIAYAERNGIEYRVIAPKDAARK 83 Query: 61 ELSYQRNFSYDRLEPWTH 78 +SY NF ++R++PWTH Sbjct: 84 NVSYSDNFRFNRMQPWTH 101 >gi|254469257|ref|ZP_05082662.1| ETC complex I subunit conserved region [Pseudovibrio sp. JE062] gi|211961092|gb|EEA96287.1| ETC complex I subunit conserved region [Pseudovibrio sp. JE062] Length = 101 Score = 84.0 bits (206), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 41/78 (52%), Positives = 49/78 (62%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +LEF+ +P I+PL+GYTSS D QQVKL F S E A YAS + IQY V K + Sbjct: 24 VLEFDPQSPKSIDPLMGYTSSGDMKQQVKLKFSSKEEAVAYASRNNIQYRVDEEAKRKHR 83 Query: 61 ELSYQRNFSYDRLEPWTH 78 SY NF +DRL PWTH Sbjct: 84 RASYSDNFRFDRLSPWTH 101 >gi|150396660|ref|YP_001327127.1| ETC complex I subunit region [Sinorhizobium medicae WSM419] gi|150028175|gb|ABR60292.1| ETC complex I subunit conserved region [Sinorhizobium medicae WSM419] Length = 101 Score = 83.6 bits (205), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 38/78 (48%), Positives = 53/78 (67%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +LEF++ P I+P++GYTSS DT QQV+L F S E A YA +GI+Y VI ++K Sbjct: 24 VLEFDQERPRTIDPIMGYTSSADTRQQVRLTFESAEQAIAYAERNGIEYRVIAPKDAARK 83 Query: 61 ELSYQRNFSYDRLEPWTH 78 +SY NF ++R +PWTH Sbjct: 84 NVSYSDNFRFNRTQPWTH 101 >gi|222148688|ref|YP_002549645.1| hypothetical protein Avi_2288 [Agrobacterium vitis S4] gi|221735674|gb|ACM36637.1| conserved hypothetical protein [Agrobacterium vitis S4] Length = 101 Score = 82.0 bits (201), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 39/78 (50%), Positives = 52/78 (66%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +LEF+ P I+P++GYTSS D LQQVKL F + E AE YA +GI Y VI + ++ Sbjct: 24 VLEFDASEPRTIDPMMGYTSSGDMLQQVKLTFETQELAEAYAQRNGIDYRVIQPKEPRRQ 83 Query: 61 ELSYQRNFSYDRLEPWTH 78 +SY NF + RL+PWTH Sbjct: 84 SVSYTDNFRFSRLQPWTH 101 >gi|222085832|ref|YP_002544363.1| NADH-ubiquinone oxidoreductase protein [Agrobacterium radiobacter K84] gi|221723280|gb|ACM26436.1| NADH-ubiquinone oxidoreductase protein [Agrobacterium radiobacter K84] Length = 101 Score = 80.9 bits (198), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 37/78 (47%), Positives = 53/78 (67%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +LEF++ P I+P++GYTSS DT QQ+KL F + E AE YA GI+Y VI +++ Sbjct: 24 VLEFDQEIPRKIDPIMGYTSSADTRQQLKLTFDTQEQAEAYAQREGIEYRVIAPKDANRQ 83 Query: 61 ELSYQRNFSYDRLEPWTH 78 +SY NF + R++PWTH Sbjct: 84 VVSYTDNFRFSRIQPWTH 101 >gi|15889112|ref|NP_354793.1| hypothetical protein Atu1810 [Agrobacterium tumefaciens str. C58] gi|15156918|gb|AAK87578.1| conserved hypothetical protein [Agrobacterium tumefaciens str. C58] Length = 101 Score = 80.5 bits (197), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 38/78 (48%), Positives = 52/78 (66%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +LEF+ P I+P++GYTSS D QQVKL F + E AE YA GI+Y VI + ++K Sbjct: 24 VLEFDAEVPRKIDPIMGYTSSSDMKQQVKLTFETQEQAEAYAQRKGIEYRVILPKEATRK 83 Query: 61 ELSYQRNFSYDRLEPWTH 78 +SY NF ++R +PWTH Sbjct: 84 VVSYTDNFRFNRTQPWTH 101 >gi|163930881|pdb|2JYA|A Chain A, Nmr Solution Structure Of Protein Atu1810 From Agrobacterium Tumefaciens. Northeast Structural Genomics Consortium Target Atr23, Ontario Centre For Structural Proteomics Target Atc1776 Length = 106 Score = 80.5 bits (197), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 38/78 (48%), Positives = 52/78 (66%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +LEF+ P I+P++GYTSS D QQVKL F + E AE YA GI+Y VI + ++K Sbjct: 27 VLEFDAEVPRKIDPIMGYTSSSDMKQQVKLTFETQEQAEAYAQRKGIEYRVILPKEATRK 86 Query: 61 ELSYQRNFSYDRLEPWTH 78 +SY NF ++R +PWTH Sbjct: 87 VVSYTDNFRFNRTQPWTH 104 >gi|325293214|ref|YP_004279078.1| NADH-ubiquinone oxidoreductase protein [Agrobacterium sp. H13-3] gi|325061067|gb|ADY64758.1| NADH-ubiquinone oxidoreductase protein [Agrobacterium sp. H13-3] Length = 101 Score = 80.1 bits (196), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 37/78 (47%), Positives = 52/78 (66%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +LEF+ P I+P++GYTS+ D QQVKL F + E AE YA GI+Y VI + ++K Sbjct: 24 VLEFDAEVPRKIDPIMGYTSTSDMKQQVKLTFETQEQAEAYAQRKGIEYRVIQPKEATRK 83 Query: 61 ELSYQRNFSYDRLEPWTH 78 +SY NF ++R +PWTH Sbjct: 84 VVSYTDNFRFNRTQPWTH 101 >gi|209549151|ref|YP_002281068.1| ETC complex subunit I [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209534907|gb|ACI54842.1| ETC complex I subunit conserved region [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 101 Score = 79.7 bits (195), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 38/78 (48%), Positives = 53/78 (67%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +LEF++ +P I+P++GYTSS DT QQVKL F + E AE YA +GI+Y VI ++ Sbjct: 24 VLEFDQESPRKIDPIMGYTSSGDTRQQVKLTFETQELAEAYAQRNGIEYRVIAPKDPVRQ 83 Query: 61 ELSYQRNFSYDRLEPWTH 78 ++Y NF Y R +PWTH Sbjct: 84 VVAYPDNFRYTRTQPWTH 101 >gi|110633453|ref|YP_673661.1| ETC complex I subunit region [Mesorhizobium sp. BNC1] gi|110284437|gb|ABG62496.1| ETC complex I subunit conserved region [Chelativorans sp. BNC1] Length = 101 Score = 79.3 bits (194), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 40/78 (51%), Positives = 51/78 (65%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +LEFE TP I+PL+GYTSS DT +QV+L F + E A YA +GI Y V P ++ Sbjct: 24 VLEFEPETPLKIDPLMGYTSSSDTRRQVRLSFATEEEAIAYAQRNGIAYQVEPEKPVHRR 83 Query: 61 ELSYQRNFSYDRLEPWTH 78 ++SY NF YDR PWTH Sbjct: 84 QVSYAENFRYDRKIPWTH 101 >gi|218462855|ref|ZP_03502946.1| NADH-ubiquinone oxidoreductase protein [Rhizobium etli Kim 5] gi|218660663|ref|ZP_03516593.1| NADH-ubiquinone oxidoreductase protein [Rhizobium etli IE4771] Length = 101 Score = 79.3 bits (194), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 37/78 (47%), Positives = 54/78 (69%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +LEF++ +P I+P++GYTSS DT QQVKL F + AE YA +GI+Y VI + +++ Sbjct: 24 VLEFDQESPRKIDPMMGYTSSSDTRQQVKLTFETQALAEAYAQRNGIEYRVIAPKEPARQ 83 Query: 61 ELSYQRNFSYDRLEPWTH 78 ++Y NF Y R +PWTH Sbjct: 84 VVAYPDNFRYTRTQPWTH 101 >gi|227821972|ref|YP_002825943.1| putative NADH-ubiquinone oxidoreductase subunit [Sinorhizobium fredii NGR234] gi|227340972|gb|ACP25190.1| putative NADH-ubiquinone oxidoreductase subunit [Sinorhizobium fredii NGR234] Length = 171 Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 36/78 (46%), Positives = 52/78 (66%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +LEF++ P I+P++GYTSS D QQ++L F S E A YA +GI Y VI ++K Sbjct: 94 VLEFDQEKPRTIDPIMGYTSSGDMRQQLRLTFESAEQAIAYAERNGIDYRVIAPKDATRK 153 Query: 61 ELSYQRNFSYDRLEPWTH 78 +SY NF ++R++PWTH Sbjct: 154 SVSYSDNFRFNRMQPWTH 171 >gi|239831555|ref|ZP_04679884.1| ETC complex I subunit conserved region [Ochrobactrum intermedium LMG 3301] gi|239823822|gb|EEQ95390.1| ETC complex I subunit conserved region [Ochrobactrum intermedium LMG 3301] Length = 118 Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 35/78 (44%), Positives = 51/78 (65%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +LE+E +P +EPL+GYTSS D Q++LFF + E A YA +GI Y V ++ ++ Sbjct: 41 LLEYEPESPRMVEPLMGYTSSGDMKSQIRLFFATREEAVDYAKRNGIAYRVFEPNEQKRR 100 Query: 61 ELSYQRNFSYDRLEPWTH 78 ++SY NF +DR PWTH Sbjct: 101 KVSYSDNFRFDRTMPWTH 118 >gi|86357510|ref|YP_469402.1| NADH-ubiquinone oxidoreductase protein [Rhizobium etli CFN 42] gi|86281612|gb|ABC90675.1| probable NADH-ubiquinone oxidoreductase protein [Rhizobium etli CFN 42] Length = 101 Score = 78.2 bits (191), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 37/78 (47%), Positives = 52/78 (66%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +LEF++ TP I+P++GYTSS D QQVKL F + AE YA +GI+Y VI +++ Sbjct: 24 VLEFDQETPRKIDPIMGYTSSGDMRQQVKLTFETQALAEAYAQRNGIEYRVIAPKDPARQ 83 Query: 61 ELSYQRNFSYDRLEPWTH 78 ++Y NF Y R +PWTH Sbjct: 84 VVAYPDNFRYTRTQPWTH 101 >gi|190891574|ref|YP_001978116.1| probable NADH-ubiquinone oxidoreductase protein [Rhizobium etli CIAT 652] gi|190696853|gb|ACE90938.1| probable NADH-ubiquinone oxidoreductase protein [Rhizobium etli CIAT 652] gi|327190802|gb|EGE57870.1| putative NADH-ubiquinone oxidoreductase protein [Rhizobium etli CNPAF512] Length = 101 Score = 77.0 bits (188), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 36/78 (46%), Positives = 53/78 (67%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +LEF++ +P I+P++GYTSS D QQVKL F + AE YA +GI+Y VI + +++ Sbjct: 24 VLEFDQESPRKIDPIMGYTSSGDMRQQVKLTFETQALAEAYAQRNGIEYRVIAPKEPARQ 83 Query: 61 ELSYQRNFSYDRLEPWTH 78 ++Y NF Y R +PWTH Sbjct: 84 VVAYPDNFRYTRTQPWTH 101 >gi|265983841|ref|ZP_06096576.1| ETC complex I subunit region [Brucella sp. 83/13] gi|264662433|gb|EEZ32694.1| ETC complex I subunit region [Brucella sp. 83/13] Length = 110 Score = 76.6 bits (187), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 35/78 (44%), Positives = 52/78 (66%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +LE+E P +EPL+GYTSS D Q++LFF S E A YA+ +GI Y ++ + ++ Sbjct: 33 LLEYEPEKPRVVEPLMGYTSSGDMKSQIRLFFASQEEAVAYATRNGIPYRLMEPHEPKRR 92 Query: 61 ELSYQRNFSYDRLEPWTH 78 ++SY NF +DR +PWTH Sbjct: 93 KVSYSDNFRFDRPQPWTH 110 >gi|254718856|ref|ZP_05180667.1| ETC complex I subunit conserved protein [Brucella sp. 83/13] gi|306837642|ref|ZP_07470512.1| ETC complex I subunit conserved region [Brucella sp. NF 2653] gi|306407291|gb|EFM63500.1| ETC complex I subunit conserved region [Brucella sp. NF 2653] Length = 101 Score = 76.6 bits (187), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 35/78 (44%), Positives = 52/78 (66%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +LE+E P +EPL+GYTSS D Q++LFF S E A YA+ +GI Y ++ + ++ Sbjct: 24 LLEYEPEKPRVVEPLMGYTSSGDMKSQIRLFFASQEEAVAYATRNGIPYRLMEPHEPKRR 83 Query: 61 ELSYQRNFSYDRLEPWTH 78 ++SY NF +DR +PWTH Sbjct: 84 KVSYSDNFRFDRPQPWTH 101 >gi|153009896|ref|YP_001371111.1| ETC complex I subunit region [Ochrobactrum anthropi ATCC 49188] gi|151561784|gb|ABS15282.1| ETC complex I subunit conserved region [Ochrobactrum anthropi ATCC 49188] Length = 101 Score = 76.6 bits (187), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 34/78 (43%), Positives = 50/78 (64%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +LE+E +P +EPL+GYTSS D Q++LFF + E A YA +GI Y + + ++ Sbjct: 24 LLEYEPESPRMVEPLMGYTSSGDMKSQIRLFFATQEEAVDYAKRNGIAYRITEPNEPKRR 83 Query: 61 ELSYQRNFSYDRLEPWTH 78 ++SY NF +DR PWTH Sbjct: 84 KVSYSDNFRFDRTMPWTH 101 >gi|218508942|ref|ZP_03506820.1| probable NADH-ubiquinone oxidoreductase protein [Rhizobium etli Brasil 5] Length = 101 Score = 76.6 bits (187), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 36/78 (46%), Positives = 52/78 (66%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +LEF++ +P I+P++GYTSS D QQVKL F + AE YA +GI+Y VI +++ Sbjct: 24 VLEFDQESPRKIDPIMGYTSSGDMRQQVKLTFETQALAEAYAQRNGIEYRVIAPKDPARQ 83 Query: 61 ELSYQRNFSYDRLEPWTH 78 ++Y NF Y R +PWTH Sbjct: 84 VVAYPDNFRYTRTQPWTH 101 >gi|306842015|ref|ZP_07474688.1| ETC complex I subunit conserved region [Brucella sp. BO2] gi|306287856|gb|EFM59276.1| ETC complex I subunit conserved region [Brucella sp. BO2] Length = 89 Score = 76.6 bits (187), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 35/78 (44%), Positives = 52/78 (66%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +LE+E P +EPL+GYTSS D Q++LFF S E A YA+ +GI Y ++ + ++ Sbjct: 12 LLEYEPEKPRVVEPLMGYTSSGDMKSQIRLFFASQEEAVAYATRNGIPYRLMEPHEPKRR 71 Query: 61 ELSYQRNFSYDRLEPWTH 78 ++SY NF +DR +PWTH Sbjct: 72 KVSYSDNFRFDRPQPWTH 89 >gi|163760320|ref|ZP_02167403.1| ETC complex I subunit conserved region [Hoeflea phototrophica DFL-43] gi|162282719|gb|EDQ33007.1| ETC complex I subunit conserved region [Hoeflea phototrophica DFL-43] Length = 101 Score = 75.5 bits (184), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 33/78 (42%), Positives = 52/78 (66%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +LEFE T I+P++GYT+S D Q++L F + EAA YA+ +GI + VI + ++ Sbjct: 24 VLEFEPETARSIDPIMGYTTSSDMKSQIRLRFETQEAAVAYATRNGIAFRVIEPKESKRR 83 Query: 61 ELSYQRNFSYDRLEPWTH 78 +++Y NF +DR +PWTH Sbjct: 84 KVAYSDNFRFDRRQPWTH 101 >gi|306843681|ref|ZP_07476281.1| ETC complex I subunit conserved region [Brucella sp. BO1] gi|306275991|gb|EFM57700.1| ETC complex I subunit conserved region [Brucella sp. BO1] Length = 101 Score = 74.3 bits (181), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 34/78 (43%), Positives = 51/78 (65%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +LE+E P +EPL+GYTSS D Q++LFF S E A YA+ +GI Y ++ + ++ Sbjct: 24 LLEYEPEKPRVVEPLMGYTSSGDMKSQIRLFFASQEEAVAYATRNGIPYRLMEPHEPKRR 83 Query: 61 ELSYQRNFSYDRLEPWTH 78 ++SY NF + R +PWTH Sbjct: 84 KVSYSDNFRFGRPQPWTH 101 >gi|17987514|ref|NP_540148.1| NADH-ubiquinone oxidoreductase 18 KD subunit [Brucella melitensis bv. 1 str. 16M] gi|23501608|ref|NP_697735.1| oxidoreductase [Brucella suis 1330] gi|62289680|ref|YP_221473.1| oxidoreductase [Brucella abortus bv. 1 str. 9-941] gi|82699607|ref|YP_414181.1| ETC complex I subunit region [Brucella melitensis biovar Abortus 2308] gi|148560468|ref|YP_001258701.1| putative oxidoreductase [Brucella ovis ATCC 25840] gi|161618691|ref|YP_001592578.1| NADH-ubiquinone oxidoreductase [Brucella canis ATCC 23365] gi|163842993|ref|YP_001627397.1| NADH-ubiquinone oxidoreductase 18 kDa subunit [Brucella suis ATCC 23445] gi|189023930|ref|YP_001934698.1| ETC complex I subunit conserved region [Brucella abortus S19] gi|225627217|ref|ZP_03785255.1| ETC complex I subunit conserved protein [Brucella ceti str. Cudo] gi|225852240|ref|YP_002732473.1| ETC complex I subunit conserved protein [Brucella melitensis ATCC 23457] gi|237815171|ref|ZP_04594169.1| ETC complex I subunit conserved region [Brucella abortus str. 2308 A] gi|254688989|ref|ZP_05152243.1| ETC complex I subunit conserved protein [Brucella abortus bv. 6 str. 870] gi|254693471|ref|ZP_05155299.1| ETC complex I subunit conserved protein [Brucella abortus bv. 3 str. Tulya] gi|254697123|ref|ZP_05158951.1| ETC complex I subunit conserved protein [Brucella abortus bv. 2 str. 86/8/59] gi|254701501|ref|ZP_05163329.1| ETC complex I subunit conserved protein [Brucella suis bv. 5 str. 513] gi|254704048|ref|ZP_05165876.1| ETC complex I subunit conserved protein [Brucella suis bv. 3 str. 686] gi|254709840|ref|ZP_05171651.1| ETC complex I subunit conserved protein [Brucella pinnipedialis B2/94] gi|254713842|ref|ZP_05175653.1| ETC complex I subunit conserved protein [Brucella ceti M644/93/1] gi|254717101|ref|ZP_05178912.1| ETC complex I subunit conserved protein [Brucella ceti M13/05/1] gi|254730019|ref|ZP_05188597.1| ETC complex I subunit conserved protein [Brucella abortus bv. 4 str. 292] gi|256031331|ref|ZP_05444945.1| ETC complex I subunit conserved protein [Brucella pinnipedialis M292/94/1] gi|256044412|ref|ZP_05447316.1| ETC complex I subunit conserved protein [Brucella melitensis bv. 1 str. Rev.1] gi|256060843|ref|ZP_05451003.1| ETC complex I subunit conserved protein [Brucella neotomae 5K33] gi|256113255|ref|ZP_05454123.1| ETC complex I subunit conserved protein [Brucella melitensis bv. 3 str. Ether] gi|256159450|ref|ZP_05457222.1| ETC complex I subunit conserved protein [Brucella ceti M490/95/1] gi|256254739|ref|ZP_05460275.1| ETC complex I subunit conserved protein [Brucella ceti B1/94] gi|256257237|ref|ZP_05462773.1| ETC complex I subunit conserved protein [Brucella abortus bv. 9 str. C68] gi|256264253|ref|ZP_05466785.1| ETC complex subunit I [Brucella melitensis bv. 2 str. 63/9] gi|256369155|ref|YP_003106663.1| oxidoreductase, putative [Brucella microti CCM 4915] gi|260168468|ref|ZP_05755279.1| oxidoreductase, putative [Brucella sp. F5/99] gi|260545568|ref|ZP_05821309.1| ETC complex I subunit region [Brucella abortus NCTC 8038] gi|260563764|ref|ZP_05834250.1| ETC complex I subunit region [Brucella melitensis bv. 1 str. 16M] gi|260566704|ref|ZP_05837174.1| ETC complex I subunit region [Brucella suis bv. 4 str. 40] gi|260754481|ref|ZP_05866829.1| ETC complex I subunit region [Brucella abortus bv. 6 str. 870] gi|260757701|ref|ZP_05870049.1| ETC complex I subunit [Brucella abortus bv. 4 str. 292] gi|260761527|ref|ZP_05873870.1| ETC complex I subunit region [Brucella abortus bv. 2 str. 86/8/59] gi|260883509|ref|ZP_05895123.1| ETC complex subunit I [Brucella abortus bv. 9 str. C68] gi|261213728|ref|ZP_05928009.1| biopolymer transporter ExbB [Brucella abortus bv. 3 str. Tulya] gi|261218912|ref|ZP_05933193.1| ETC complex I subunit region [Brucella ceti M13/05/1] gi|261221920|ref|ZP_05936201.1| ETC complex subunit I [Brucella ceti B1/94] gi|261317380|ref|ZP_05956577.1| ETC complex I subunit region [Brucella pinnipedialis B2/94] gi|261321589|ref|ZP_05960786.1| ETC complex I subunit region [Brucella ceti M644/93/1] gi|261324837|ref|ZP_05964034.1| ETC complex subunit I [Brucella neotomae 5K33] gi|261752047|ref|ZP_05995756.1| ETC complex I subunit region [Brucella suis bv. 5 str. 513] gi|261754706|ref|ZP_05998415.1| ETC complex I subunit region [Brucella suis bv. 3 str. 686] gi|261757934|ref|ZP_06001643.1| ETC complex I subunit region [Brucella sp. F5/99] gi|265988417|ref|ZP_06100974.1| ETC complex subunit I [Brucella pinnipedialis M292/94/1] gi|265990832|ref|ZP_06103389.1| ETC complex subunit I [Brucella melitensis bv. 1 str. Rev.1] gi|265994667|ref|ZP_06107224.1| ETC complex subunit I [Brucella melitensis bv. 3 str. Ether] gi|265997883|ref|ZP_06110440.1| ETC complex subunit I [Brucella ceti M490/95/1] gi|294852080|ref|ZP_06792753.1| NADH-ubiquinone oxidoreductase 18 kDa subunit [Brucella sp. NVSL 07-0026] gi|297248087|ref|ZP_06931805.1| NADH-ubiquinone oxidoreductase 18 kDa subunit [Brucella abortus bv. 5 str. B3196] gi|17983214|gb|AAL52412.1| NADH-ubiquinone oxidoreductase 18 kd subunit [Brucella melitensis bv. 1 str. 16M] gi|23347524|gb|AAN29650.1| oxidoreductase, putative [Brucella suis 1330] gi|62195812|gb|AAX74112.1| oxidoreductase, hypothetical [Brucella abortus bv. 1 str. 9-941] gi|82615708|emb|CAJ10695.1| ETC complex I subunit conserved region [Brucella melitensis biovar Abortus 2308] gi|148371725|gb|ABQ61704.1| putative oxidoreductase [Brucella ovis ATCC 25840] gi|161335502|gb|ABX61807.1| NADH-ubiquinone oxidoreductase [Brucella canis ATCC 23365] gi|163673716|gb|ABY37827.1| NADH-ubiquinone oxidoreductase 18 kDa subunit [Brucella suis ATCC 23445] gi|189019502|gb|ACD72224.1| ETC complex I subunit conserved region [Brucella abortus S19] gi|225618052|gb|EEH15096.1| ETC complex I subunit conserved protein [Brucella ceti str. Cudo] gi|225640605|gb|ACO00519.1| ETC complex I subunit conserved protein [Brucella melitensis ATCC 23457] gi|237790008|gb|EEP64218.1| ETC complex I subunit conserved region [Brucella abortus str. 2308 A] gi|255999315|gb|ACU47714.1| oxidoreductase, putative [Brucella microti CCM 4915] gi|260096975|gb|EEW80850.1| ETC complex I subunit region [Brucella abortus NCTC 8038] gi|260153780|gb|EEW88872.1| ETC complex I subunit region [Brucella melitensis bv. 1 str. 16M] gi|260156222|gb|EEW91302.1| ETC complex I subunit region [Brucella suis bv. 4 str. 40] gi|260668019|gb|EEX54959.1| ETC complex I subunit [Brucella abortus bv. 4 str. 292] gi|260671959|gb|EEX58780.1| ETC complex I subunit region [Brucella abortus bv. 2 str. 86/8/59] gi|260674589|gb|EEX61410.1| ETC complex I subunit region [Brucella abortus bv. 6 str. 870] gi|260873037|gb|EEX80106.1| ETC complex subunit I [Brucella abortus bv. 9 str. C68] gi|260915335|gb|EEX82196.1| biopolymer transporter ExbB [Brucella abortus bv. 3 str. Tulya] gi|260920504|gb|EEX87157.1| ETC complex subunit I [Brucella ceti B1/94] gi|260924001|gb|EEX90569.1| ETC complex I subunit region [Brucella ceti M13/05/1] gi|261294279|gb|EEX97775.1| ETC complex I subunit region [Brucella ceti M644/93/1] gi|261296603|gb|EEY00100.1| ETC complex I subunit region [Brucella pinnipedialis B2/94] gi|261300817|gb|EEY04314.1| ETC complex subunit I [Brucella neotomae 5K33] gi|261737918|gb|EEY25914.1| ETC complex I subunit region [Brucella sp. F5/99] gi|261741800|gb|EEY29726.1| ETC complex I subunit region [Brucella suis bv. 5 str. 513] gi|261744459|gb|EEY32385.1| ETC complex I subunit region [Brucella suis bv. 3 str. 686] gi|262552351|gb|EEZ08341.1| ETC complex subunit I [Brucella ceti M490/95/1] gi|262765780|gb|EEZ11569.1| ETC complex subunit I [Brucella melitensis bv. 3 str. Ether] gi|263001616|gb|EEZ14191.1| ETC complex subunit I [Brucella melitensis bv. 1 str. Rev.1] gi|263094512|gb|EEZ18321.1| ETC complex subunit I [Brucella melitensis bv. 2 str. 63/9] gi|264660614|gb|EEZ30875.1| ETC complex subunit I [Brucella pinnipedialis M292/94/1] gi|294820669|gb|EFG37668.1| NADH-ubiquinone oxidoreductase 18 kDa subunit [Brucella sp. NVSL 07-0026] gi|297175256|gb|EFH34603.1| NADH-ubiquinone oxidoreductase 18 kDa subunit [Brucella abortus bv. 5 str. B3196] Length = 101 Score = 73.6 bits (179), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 34/78 (43%), Positives = 51/78 (65%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +LE+E P +EPL+GYTSS D Q++LFF S E A YA+ + I Y ++ + ++ Sbjct: 24 LLEYEPEKPRVVEPLMGYTSSGDMKSQIRLFFASQEEAVAYATRNDIPYRLMEPHEPKRR 83 Query: 61 ELSYQRNFSYDRLEPWTH 78 ++SY NF +DR +PWTH Sbjct: 84 KVSYSDNFRFDRPQPWTH 101 >gi|254707051|ref|ZP_05168879.1| ETC complex I subunit conserved protein [Brucella pinnipedialis M163/99/10] gi|261314517|ref|ZP_05953714.1| ETC complex I subunit region [Brucella pinnipedialis M163/99/10] gi|261303543|gb|EEY07040.1| ETC complex I subunit region [Brucella pinnipedialis M163/99/10] Length = 101 Score = 73.6 bits (179), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 34/78 (43%), Positives = 51/78 (65%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +LE+E P +EPL+GYTSS D Q++LFF S E A YA+ + I Y ++ + ++ Sbjct: 24 LLEYEPEKPRVVEPLIGYTSSGDMKSQIRLFFASQEEAVAYATRNDIPYRLMEPHEPKRR 83 Query: 61 ELSYQRNFSYDRLEPWTH 78 ++SY NF +DR +PWTH Sbjct: 84 KVSYSDNFRFDRPQPWTH 101 >gi|218672200|ref|ZP_03521869.1| probable NADH-ubiquinone oxidoreductase protein [Rhizobium etli GR56] Length = 101 Score = 73.6 bits (179), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 36/78 (46%), Positives = 51/78 (65%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +LEF++ +P I+P++GYTSS D QQVKL F + AE YA +GI+Y VI +++ Sbjct: 24 VLEFDQESPRKIDPIMGYTSSGDMRQQVKLTFETQALAEAYAQRNGIEYRVIAPKDPARQ 83 Query: 61 ELSYQRNFSYDRLEPWTH 78 +SY NF Y R + WTH Sbjct: 84 VVSYPDNFRYTRTQLWTH 101 >gi|326408743|gb|ADZ65808.1| ETC complex I subunit conserved region [Brucella melitensis M28] gi|326538463|gb|ADZ86678.1| ETC complex I subunit conserved protein [Brucella melitensis M5-90] Length = 89 Score = 73.6 bits (179), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 34/78 (43%), Positives = 51/78 (65%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +LE+E P +EPL+GYTSS D Q++LFF S E A YA+ + I Y ++ + ++ Sbjct: 12 LLEYEPEKPRVVEPLMGYTSSGDMKSQIRLFFASQEEAVAYATRNDIPYRLMEPHEPKRR 71 Query: 61 ELSYQRNFSYDRLEPWTH 78 ++SY NF +DR +PWTH Sbjct: 72 KVSYSDNFRFDRPQPWTH 89 >gi|116251865|ref|YP_767703.1| NADH-ubiquinone oxidoreductase subunit [Rhizobium leguminosarum bv. viciae 3841] gi|241204476|ref|YP_002975572.1| ETC complex I subunit conserved region [Rhizobium leguminosarum bv. trifolii WSM1325] gi|115256513|emb|CAK07597.1| putative NADH-ubiquinone oxidoreductase subunit [Rhizobium leguminosarum bv. viciae 3841] gi|240858366|gb|ACS56033.1| ETC complex I subunit conserved region [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 101 Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 35/78 (44%), Positives = 51/78 (65%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +LE+++ + I+P++GYTSS D QQVKL F + E AE YA +GI+Y VI ++ Sbjct: 24 VLEYDQESARKIDPIMGYTSSGDMRQQVKLTFETQELAEAYAQRNGIEYRVIAPKDPVRQ 83 Query: 61 ELSYQRNFSYDRLEPWTH 78 ++Y NF Y R +PWTH Sbjct: 84 VVAYPDNFRYTRTQPWTH 101 >gi|220921647|ref|YP_002496948.1| ETC complex subunit I [Methylobacterium nodulans ORS 2060] gi|219946253|gb|ACL56645.1| ETC complex I subunit conserved region [Methylobacterium nodulans ORS 2060] Length = 102 Score = 72.8 bits (177), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 36/78 (46%), Positives = 48/78 (61%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +LEF++ P +PL+G+TSS D LQQV+L F + E A YA+ GI Y V +K Sbjct: 25 VLEFDQTAPRETDPLMGWTSSSDMLQQVRLEFDTREEAVAYATRAGIAYRVEEPKPALRK 84 Query: 61 ELSYQRNFSYDRLEPWTH 78 +SY NF Y+R PWTH Sbjct: 85 GISYADNFKYNRSAPWTH 102 >gi|254501235|ref|ZP_05113386.1| ETC complex I subunit conserved region superfamily [Labrenzia alexandrii DFL-11] gi|222437306|gb|EEE43985.1| ETC complex I subunit conserved region superfamily [Labrenzia alexandrii DFL-11] Length = 101 Score = 71.6 bits (174), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 35/78 (44%), Positives = 45/78 (57%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +L+FE +EPL+GYTSS D QQV++ F S E A YA GI Y V S + Sbjct: 24 VLDFEPEVAKSVEPLMGYTSSSDMKQQVRMVFESQEDAVAYAKRQGIPYRVEKSQARVVR 83 Query: 61 ELSYQRNFSYDRLEPWTH 78 +Y NF +DR+ PWTH Sbjct: 84 GAAYADNFKFDRVAPWTH 101 >gi|170751808|ref|YP_001758068.1| ETC complex I subunit region [Methylobacterium radiotolerans JCM 2831] gi|170658330|gb|ACB27385.1| ETC complex I subunit conserved region [Methylobacterium radiotolerans JCM 2831] Length = 103 Score = 71.6 bits (174), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 35/79 (44%), Positives = 49/79 (62%), Gaps = 1/79 (1%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCV-IPSCKESQ 59 +LEF++ +P I+PL+G+ S D LQQV+L F + E A YA GI + V P+ + Sbjct: 25 ILEFDRTSPREIDPLMGWNGSSDMLQQVRLEFDTEEEAVAYAKREGIAFRVEQPAKPAHR 84 Query: 60 KELSYQRNFSYDRLEPWTH 78 K LSY NF ++R PWTH Sbjct: 85 KGLSYSDNFKFNRTAPWTH 103 >gi|170738783|ref|YP_001767438.1| ETC complex I subunit region [Methylobacterium sp. 4-46] gi|168193057|gb|ACA15004.1| ETC complex I subunit conserved region [Methylobacterium sp. 4-46] Length = 102 Score = 71.6 bits (174), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 36/78 (46%), Positives = 48/78 (61%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +LEF++ P +PL+G+TSS D LQQV+L F + E A YA+ GI Y + +K Sbjct: 25 VLEFDQTAPRETDPLMGWTSSSDMLQQVRLEFDTREEAVAYATREGIAYRLEEPKPLLRK 84 Query: 61 ELSYQRNFSYDRLEPWTH 78 LSY NF Y+R PWTH Sbjct: 85 GLSYADNFKYNRTAPWTH 102 >gi|254466824|ref|ZP_05080235.1| ETC complex I subunit conserved region [Rhodobacterales bacterium Y4I] gi|206687732|gb|EDZ48214.1| ETC complex I subunit conserved region [Rhodobacterales bacterium Y4I] Length = 103 Score = 71.2 bits (173), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 36/80 (45%), Positives = 51/80 (63%), Gaps = 2/80 (2%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVI-PSCKESQ 59 +LEF + ++PL+G+TSS DT QVKL F S EAA +YA DHGI+ V+ P +++ Sbjct: 24 VLEFAPASAREVDPLMGWTSSSDTQSQVKLRFDSKEAALEYAKDHGIEALVVEPKQRKAN 83 Query: 60 -KELSYQRNFSYDRLEPWTH 78 + Y NF+ +R PWTH Sbjct: 84 IRPGGYGDNFATNRRGPWTH 103 >gi|328543610|ref|YP_004303719.1| Putative NADH-ubiquinone oxidoreductase subunit [Polymorphum gilvum SL003B-26A1] gi|326413354|gb|ADZ70417.1| Putative NADH-ubiquinone oxidoreductase subunit [Polymorphum gilvum SL003B-26A1] Length = 101 Score = 70.9 bits (172), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 34/78 (43%), Positives = 47/78 (60%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +L++E +EPL+GYTSS D QQ++L+F S E A YA + I Y V P+ + + Sbjct: 24 VLDYEPEIARSVEPLMGYTSSADMKQQIRLYFDSCEDAVAYARRNAIPYRVEPAKERKVR 83 Query: 61 ELSYQRNFSYDRLEPWTH 78 SY NF +DR PWTH Sbjct: 84 GASYSDNFRFDRSAPWTH 101 >gi|119384054|ref|YP_915110.1| ETC complex I subunit region [Paracoccus denitrificans PD1222] gi|119384327|ref|YP_915383.1| ETC complex I subunit region [Paracoccus denitrificans PD1222] gi|119373821|gb|ABL69414.1| ETC complex I subunit conserved region [Paracoccus denitrificans PD1222] gi|119374094|gb|ABL69687.1| ETC complex I subunit conserved region [Paracoccus denitrificans PD1222] Length = 103 Score = 70.9 bits (172), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 35/80 (43%), Positives = 49/80 (61%), Gaps = 2/80 (2%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVI-PSCKESQ 59 +L+F P I+PL+G+TSS DT QV+L F + + AE YA +HG+ Y VI P + + Sbjct: 24 VLDFPPADPRAIDPLMGWTSSDDTQSQVRLRFETRKQAEDYAREHGLDYEVIEPHTRAAN 83 Query: 60 -KELSYQRNFSYDRLEPWTH 78 + Y NF+ DR PWTH Sbjct: 84 IRPRGYGENFASDRRAPWTH 103 >gi|75675798|ref|YP_318219.1| ETC complex I subunit region [Nitrobacter winogradskyi Nb-255] gi|74420668|gb|ABA04867.1| ETC complex I subunit conserved region [Nitrobacter winogradskyi Nb-255] Length = 115 Score = 70.1 bits (170), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 34/77 (44%), Positives = 47/77 (61%) Query: 2 LEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKE 61 L++E P IEPL+G+TSS DT QQ+ L F + E A Y GI Y VI + ++ Sbjct: 39 LDYEPEQPRAIEPLMGWTSSGDTKQQITLRFETREDAIAYCEREGIPYQVIEPKGRATRK 98 Query: 62 LSYQRNFSYDRLEPWTH 78 +Y NF++ R+EPWTH Sbjct: 99 AAYSDNFAFRRIEPWTH 115 >gi|158423185|ref|YP_001524477.1| putative NADH dehydrogenase (ubiquinone) Fe-S protein 4 [Azorhizobium caulinodans ORS 571] gi|158330074|dbj|BAF87559.1| putative NADH dehydrogenase (ubiquinone) Fe-S protein 4 [Azorhizobium caulinodans ORS 571] Length = 117 Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 33/78 (42%), Positives = 48/78 (61%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +LE+E P +EPL+GYTSS D QV+L F + E A YA HGI Y V + +++ Sbjct: 40 VLEYEPERPRQVEPLMGYTSSSDMKSQVRLRFETREEAVAYAERHGIPYQVAEPHEPARR 99 Query: 61 ELSYQRNFSYDRLEPWTH 78 ++Y NF++ R+ WTH Sbjct: 100 RIAYSDNFAHARVGQWTH 117 >gi|126730953|ref|ZP_01746762.1| NADH-ubiquinone oxidoreductase family protein [Sagittula stellata E-37] gi|126708669|gb|EBA07726.1| NADH-ubiquinone oxidoreductase family protein [Sagittula stellata E-37] Length = 103 Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 34/79 (43%), Positives = 50/79 (63%), Gaps = 2/79 (2%) Query: 2 LEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVI-PSCKESQ- 59 L++ + +P I+PL+G+TSS DT QV+L F + EAA YA +HGI V+ P +++ Sbjct: 25 LDYVQDSPRSIDPLMGWTSSADTQSQVRLRFETKEAALAYAKEHGIDATVMEPKKRKANI 84 Query: 60 KELSYQRNFSYDRLEPWTH 78 + Y NF+ DR PWTH Sbjct: 85 RARGYAENFASDRRAPWTH 103 >gi|90419544|ref|ZP_01227454.1| conserved hypothetical protein [Aurantimonas manganoxydans SI85-9A1] gi|90336481|gb|EAS50222.1| conserved hypothetical protein [Aurantimonas manganoxydans SI85-9A1] Length = 123 Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 34/78 (43%), Positives = 48/78 (61%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 ML +E P +EPL+GYTSS D L Q++L F + E A +YA + I Y V + + Sbjct: 46 MLVYEPEQPKRVEPLMGYTSSGDMLSQLRLSFETREQAVEYAERNDIPYRVEEPKETRRP 105 Query: 61 ELSYQRNFSYDRLEPWTH 78 +++Y NF YDR +PWTH Sbjct: 106 KIAYADNFRYDRRQPWTH 123 >gi|298291599|ref|YP_003693538.1| ETC complex I subunit conserved region [Starkeya novella DSM 506] gi|296928110|gb|ADH88919.1| ETC complex I subunit conserved region [Starkeya novella DSM 506] Length = 101 Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 33/78 (42%), Positives = 48/78 (61%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +L++E P +EPL+GYTSS D Q++L F S E A YA HGI Y V + +++ Sbjct: 24 VLDYEPEQPRQVEPLMGYTSSGDMKSQLRLRFDSKEEAIAYAERHGIAYQVQEPQEATRR 83 Query: 61 ELSYQRNFSYDRLEPWTH 78 ++Y NFS+ R+ WTH Sbjct: 84 RMAYADNFSFRRIGQWTH 101 >gi|118589020|ref|ZP_01546427.1| ETC complex I subunit conserved region protein [Stappia aggregata IAM 12614] gi|118438349|gb|EAV44983.1| ETC complex I subunit conserved region protein [Stappia aggregata IAM 12614] Length = 101 Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 32/78 (41%), Positives = 47/78 (60%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +L++E +EPL+GYTSS D QQ++LFF + E A YA HGI + V + + + Sbjct: 24 VLDYEPEVAKSVEPLMGYTSSSDMKQQIRLFFETSEEAVAYAKRHGIPHRVEKARERKVR 83 Query: 61 ELSYQRNFSYDRLEPWTH 78 +Y NF ++R PWTH Sbjct: 84 GSAYADNFKFNRSAPWTH 101 >gi|304319862|ref|YP_003853505.1| NADH-ubiquinone oxidoreductase-related protein [Parvularcula bermudensis HTCC2503] gi|303298765|gb|ADM08364.1| NADH-ubiquinone oxidoreductase-related protein [Parvularcula bermudensis HTCC2503] Length = 101 Score = 68.2 bits (165), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 34/78 (43%), Positives = 48/78 (61%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +LEFE +P +PL+G+TSS DTL QVK+ F + EAA YA + + Y V+ ++ Sbjct: 24 VLEFEGRSPRKTDPLMGWTSSADTLGQVKMTFDTKEAAIAYAKEQRLPYQVLEKPDQAPV 83 Query: 61 ELSYQRNFSYDRLEPWTH 78 SY NF++ R PWTH Sbjct: 84 PKSYADNFAFRRRTPWTH 101 >gi|115524919|ref|YP_781830.1| ETC complex I subunit region [Rhodopseudomonas palustris BisA53] gi|115518866|gb|ABJ06850.1| ETC complex I subunit conserved region [Rhodopseudomonas palustris BisA53] Length = 111 Score = 68.2 bits (165), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 33/77 (42%), Positives = 46/77 (59%) Query: 2 LEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKE 61 L++E P IEPL+G+TSS D QQ+ L F + E A Y GI Y VI + +++ Sbjct: 35 LDYEPAQPRVIEPLMGWTSSTDMRQQLTLKFHTREEAIAYCEREGIAYQVIEPKESARRR 94 Query: 62 LSYQRNFSYDRLEPWTH 78 +Y NF++ R EPWTH Sbjct: 95 AAYSDNFAFRRTEPWTH 111 >gi|148255431|ref|YP_001240016.1| putative ETC complex I subunit region protein [Bradyrhizobium sp. BTAi1] gi|146407604|gb|ABQ36110.1| putative ETC complex I subunit conserved region protein [Bradyrhizobium sp. BTAi1] Length = 101 Score = 68.2 bits (165), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 35/77 (45%), Positives = 47/77 (61%) Query: 2 LEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKE 61 L++E P +EPL+G+TSS D QQV L F S E A Y GI Y VI + +++ Sbjct: 25 LDYEPELPRAVEPLMGWTSSSDMKQQVTLRFDSKEEAIAYCERKGIPYQVIEPKEPVKRQ 84 Query: 62 LSYQRNFSYDRLEPWTH 78 ++Y NFS+ R EPWTH Sbjct: 85 IAYADNFSFRRGEPWTH 101 >gi|146340628|ref|YP_001205676.1| putative ETC complex I subunit region protein (fragment) [Bradyrhizobium sp. ORS278] gi|146193434|emb|CAL77450.1| putative ETC complex I subunit conserved region protein (fragment) [Bradyrhizobium sp. ORS278] Length = 101 Score = 68.2 bits (165), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 35/77 (45%), Positives = 47/77 (61%) Query: 2 LEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKE 61 L++E P +EPL+G+TSS D QQV L F S E A Y GI Y VI + +++ Sbjct: 25 LDYEPEQPRSVEPLMGWTSSSDMKQQVTLRFDSKEEAIAYCERKGIPYQVIEPKEPVKRQ 84 Query: 62 LSYQRNFSYDRLEPWTH 78 ++Y NFS+ R EPWTH Sbjct: 85 VAYADNFSFRRGEPWTH 101 >gi|319784357|ref|YP_004143833.1| ETC complex I subunit conserved region [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317170245|gb|ADV13783.1| ETC complex I subunit conserved region [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 101 Score = 67.8 bits (164), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 31/78 (39%), Positives = 47/78 (60%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +LEF+ + I+PL+GYT+S D Q++L F + E A YA G+ + V + ++ Sbjct: 24 VLEFDPESRKKIDPLMGYTTSADMRSQIRLSFDTREEAVAYAEKQGLAFRVEEPKETKRR 83 Query: 61 ELSYQRNFSYDRLEPWTH 78 ++SY NF YDR PWTH Sbjct: 84 QISYAENFRYDRRTPWTH 101 >gi|84502901|ref|ZP_01001014.1| NADH-ubiquinone oxidoreductase family protein [Oceanicola batsensis HTCC2597] gi|84388884|gb|EAQ01754.1| NADH-ubiquinone oxidoreductase family protein [Oceanicola batsensis HTCC2597] Length = 103 Score = 67.8 bits (164), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 34/80 (42%), Positives = 49/80 (61%), Gaps = 2/80 (2%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIP--SCKES 58 +L+F T ++PL+G+TS+ DT QV++ FP+ EAA +YA DHGI VI S K + Sbjct: 24 VLDFVSDTRREVDPLMGWTSNDDTQAQVRMRFPTREAAVEYARDHGIDAVVIEPHSRKPN 83 Query: 59 QKELSYQRNFSYDRLEPWTH 78 + Y NF+ +R WTH Sbjct: 84 VRPGGYGDNFATNRRLVWTH 103 >gi|209885171|ref|YP_002289028.1| NADH dehydrogenase [Oligotropha carboxidovorans OM5] gi|209873367|gb|ACI93163.1| NADH dehydrogenase [Oligotropha carboxidovorans OM5] Length = 101 Score = 67.4 bits (163), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 33/77 (42%), Positives = 45/77 (58%) Query: 2 LEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKE 61 L+FE P +EPL+G+TSS D QQV L F + E A Y +GI Y V ++ Sbjct: 25 LDFEPEVPRVVEPLMGWTSSSDMKQQVSLHFVTKEEAIAYCEANGIAYEVAEPKDSIRRR 84 Query: 62 LSYQRNFSYDRLEPWTH 78 ++Y NF++ R EPWTH Sbjct: 85 VAYADNFAFRRSEPWTH 101 >gi|188582572|ref|YP_001926017.1| ETC complex I subunit conserved region [Methylobacterium populi BJ001] gi|179346070|gb|ACB81482.1| ETC complex I subunit conserved region [Methylobacterium populi BJ001] Length = 103 Score = 67.4 bits (163), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 35/79 (44%), Positives = 48/79 (60%), Gaps = 1/79 (1%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKE-SQ 59 +LEF++ P +PL+G+T S D LQQV+L F + E A YA GI Y V + ++ Sbjct: 25 VLEFDQTEPRETDPLMGWTGSSDMLQQVRLEFDTSEEAVAYAKAAGIAYRVEETPPPIAR 84 Query: 60 KELSYQRNFSYDRLEPWTH 78 K LSY NF ++R PWTH Sbjct: 85 KGLSYSDNFKFNRTAPWTH 103 >gi|312112977|ref|YP_004010573.1| ETC complex I subunit conserved region [Rhodomicrobium vannielii ATCC 17100] gi|311218106|gb|ADP69474.1| ETC complex I subunit conserved region [Rhodomicrobium vannielii ATCC 17100] Length = 103 Score = 67.4 bits (163), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 34/78 (43%), Positives = 45/78 (57%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +L++E T IEPL+G+TSS D L QV+LFF + E A YA + I Y V + Sbjct: 26 VLDYEPATAREIEPLMGWTSSNDMLSQVRLFFETKEEAVDYAKKNAIPYRVFEPNPRAAI 85 Query: 61 ELSYQRNFSYDRLEPWTH 78 + SY NF Y R+ WTH Sbjct: 86 KKSYADNFKYGRIGSWTH 103 >gi|27379525|ref|NP_771054.1| NADH-ubiquinone oxidoreductase-related protein [Bradyrhizobium japonicum USDA 110] gi|27352677|dbj|BAC49679.1| blr4414 [Bradyrhizobium japonicum USDA 110] Length = 154 Score = 67.4 bits (163), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 34/77 (44%), Positives = 45/77 (58%) Query: 2 LEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKE 61 L++E P +EPL+G+TSS D QQ+ L F S E A Y GI Y VI ++ Sbjct: 78 LDYEPEQPRAVEPLMGWTSSGDMKQQITLRFDSKEEAVAYCERKGIAYQVIEPQDSIRRP 137 Query: 62 LSYQRNFSYDRLEPWTH 78 ++Y NFS+ R EPWTH Sbjct: 138 VAYADNFSFRRGEPWTH 154 >gi|307942455|ref|ZP_07657806.1| ETC complex I subunit region [Roseibium sp. TrichSKD4] gi|307774741|gb|EFO33951.1| ETC complex I subunit region [Roseibium sp. TrichSKD4] Length = 110 Score = 67.0 bits (162), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 31/78 (39%), Positives = 47/78 (60%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +L++E +EPL+GYTSS D QQ++L+F S E A YA +GI + V + + + + Sbjct: 33 ILDYEPEAARSVEPLMGYTSSSDMKQQIRLYFDSKEDAVAYARRYGIAHRVEEAKERTVR 92 Query: 61 ELSYQRNFSYDRLEPWTH 78 +Y NF + R PWTH Sbjct: 93 TATYADNFKFSRRAPWTH 110 >gi|149914355|ref|ZP_01902886.1| NADH-ubiquinone oxidoreductase family protein [Roseobacter sp. AzwK-3b] gi|149811874|gb|EDM71707.1| NADH-ubiquinone oxidoreductase family protein [Roseobacter sp. AzwK-3b] Length = 103 Score = 67.0 bits (162), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 35/80 (43%), Positives = 49/80 (61%), Gaps = 2/80 (2%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKE--S 58 +LE+ TP ++PL+G+TSS DT QV+L FP+ EAA YAS+HGI V+ K + Sbjct: 24 VLEYFPETPREVDPLMGWTSSNDTQAQVRLKFPTKEAALDYASEHGIDAVVLEPHKRKPN 83 Query: 59 QKELSYQRNFSYDRLEPWTH 78 + Y NF+ +R WTH Sbjct: 84 IRPGGYGENFATNRRATWTH 103 >gi|260463358|ref|ZP_05811559.1| ETC complex I subunit conserved region [Mesorhizobium opportunistum WSM2075] gi|259030948|gb|EEW32223.1| ETC complex I subunit conserved region [Mesorhizobium opportunistum WSM2075] Length = 101 Score = 67.0 bits (162), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 31/78 (39%), Positives = 46/78 (58%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +LEF+ I+PL+GYT+S D Q++L F + E A YA G+ + V + ++ Sbjct: 24 VLEFDPEMRKKIDPLMGYTTSGDMRSQIRLTFDTREEAVAYAEKEGLAFRVEEPKEAKRR 83 Query: 61 ELSYQRNFSYDRLEPWTH 78 ++SY NF YDR PWTH Sbjct: 84 QISYAENFRYDRRTPWTH 101 >gi|114765086|ref|ZP_01444231.1| NADH-ubiquinone oxidoreductase family protein [Pelagibaca bermudensis HTCC2601] gi|114542490|gb|EAU45516.1| NADH-ubiquinone oxidoreductase family protein [Roseovarius sp. HTCC2601] Length = 103 Score = 67.0 bits (162), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 34/80 (42%), Positives = 46/80 (57%), Gaps = 2/80 (2%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKE--S 58 +LEF P ++PL+G+TSS DT QV+L F S EAA YA ++GI+ V K + Sbjct: 24 VLEFAASAPREVDPLMGWTSSSDTQSQVRLRFDSKEAALDYAKENGIEATVSEPNKRKPN 83 Query: 59 QKELSYQRNFSYDRLEPWTH 78 + Y NF+ DR WTH Sbjct: 84 VRARGYAENFAVDRRGAWTH 103 >gi|163744634|ref|ZP_02151994.1| NADH-ubiquinone oxidoreductase 18 kDa subunit [Oceanibulbus indolifex HEL-45] gi|161381452|gb|EDQ05861.1| NADH-ubiquinone oxidoreductase 18 kDa subunit [Oceanibulbus indolifex HEL-45] Length = 103 Score = 67.0 bits (162), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 34/80 (42%), Positives = 48/80 (60%), Gaps = 2/80 (2%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCV-IPSCKESQ 59 +LEF ++PL+G+TSS DT QV+L F + EAAE+YA DHGI V +P+ ++ Sbjct: 24 LLEFSPAEARSVDPLMGWTSSDDTQSQVRLEFDTREAAEEYARDHGIDAQVQLPNKRKPN 83 Query: 60 -KELSYQRNFSYDRLEPWTH 78 + Y NF+ R WTH Sbjct: 84 IRAGGYGENFATGRRGAWTH 103 >gi|126737419|ref|ZP_01753154.1| NADH-ubiquinone oxidoreductase family protein [Roseobacter sp. SK209-2-6] gi|126722004|gb|EBA18707.1| NADH-ubiquinone oxidoreductase family protein [Roseobacter sp. SK209-2-6] Length = 103 Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 33/80 (41%), Positives = 50/80 (62%), Gaps = 2/80 (2%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVI-PSCKESQ 59 +L++ + ++PL+G+TSSKDT QV+L F S EAA YA +HGI V+ P + + Sbjct: 24 VLDYAPASAREVDPLMGWTSSKDTQSQVRLRFDSKEAALDYAQEHGIDAEVVDPKPRGAN 83 Query: 60 -KELSYQRNFSYDRLEPWTH 78 ++ Y NF+ +R PWTH Sbjct: 84 IRQGGYGENFATNRRTPWTH 103 >gi|255263771|ref|ZP_05343113.1| NADH dehydrogenase (ubiquinone) iron-sulfur protein 4, precursor [Thalassiobium sp. R2A62] gi|255106106|gb|EET48780.1| NADH dehydrogenase (ubiquinone) iron-sulfur protein 4, precursor [Thalassiobium sp. R2A62] Length = 103 Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 32/80 (40%), Positives = 49/80 (61%), Gaps = 2/80 (2%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVI-PSCKESQ 59 +LEF + + I+PL+G+TSS DT QV++ F + EAA +YA+D+GI V P + + Sbjct: 24 VLEFTRDSAREIDPLMGWTSSSDTQSQVRMTFDTKEAAVEYAADNGIDAAVTEPKPRRAN 83 Query: 60 -KELSYQRNFSYDRLEPWTH 78 + Y NF+ +R WTH Sbjct: 84 IRANGYAENFATNRRGAWTH 103 >gi|86140158|ref|ZP_01058720.1| NADH-ubiquinone oxidoreductase family protein [Roseobacter sp. MED193] gi|85823095|gb|EAQ43308.1| NADH-ubiquinone oxidoreductase family protein [Roseobacter sp. MED193] Length = 91 Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 33/80 (41%), Positives = 51/80 (63%), Gaps = 2/80 (2%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVI-PSCKESQ 59 +L++ + + ++PL+G+TSS DT QV+L F S EAA +YA DHGI V+ P +++ Sbjct: 12 VLDYAQASAREVDPLMGWTSSSDTQSQVRLRFDSKEAALEYAQDHGIDAEVVEPKPRKAN 71 Query: 60 -KELSYQRNFSYDRLEPWTH 78 + Y NF+ +R PWTH Sbjct: 72 LRPGGYGENFATNRRVPWTH 91 >gi|299133824|ref|ZP_07027018.1| ETC complex I subunit conserved region [Afipia sp. 1NLS2] gi|298591660|gb|EFI51861.1| ETC complex I subunit conserved region [Afipia sp. 1NLS2] Length = 101 Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 32/77 (41%), Positives = 47/77 (61%) Query: 2 LEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKE 61 L++E P +EPL+G+TSS D QQV L F + E A Y +GI Y V + +++ Sbjct: 25 LDYEPEKPRVVEPLMGWTSSADMKQQVTLHFHTREEAVAYCEANGIAYQVQEPKESVRRQ 84 Query: 62 LSYQRNFSYDRLEPWTH 78 ++Y NF++ R EPWTH Sbjct: 85 VAYADNFAFRRSEPWTH 101 >gi|162148990|ref|YP_001603451.1| putative oxidoreductase [Gluconacetobacter diazotrophicus PAl 5] gi|209545257|ref|YP_002277486.1| ETC complex subunit I conserved region [Gluconacetobacter diazotrophicus PAl 5] gi|161787567|emb|CAP57163.1| putative oxidoreductase [Gluconacetobacter diazotrophicus PAl 5] gi|209532934|gb|ACI52871.1| ETC complex I subunit conserved region [Gluconacetobacter diazotrophicus PAl 5] Length = 101 Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 31/78 (39%), Positives = 45/78 (57%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +LE+ + P +PL+G+T S+DT QV+L FP+ E A YA H + Y + +K Sbjct: 24 VLEYGQTQPRQQDPLMGWTGSRDTRSQVRLRFPNRETAVAYAERHAVPYDLELPVARVRK 83 Query: 61 ELSYQRNFSYDRLEPWTH 78 Y NF YDR++ WTH Sbjct: 84 PKLYADNFRYDRVQNWTH 101 >gi|163852550|ref|YP_001640593.1| ETC complex I subunit region [Methylobacterium extorquens PA1] gi|218531387|ref|YP_002422203.1| ETC complex I subunit conserved region [Methylobacterium chloromethanicum CM4] gi|240139884|ref|YP_002964361.1| putative NADH dehydrogenase (ubiquinone) Fe-S protein 4 (18kD) (NADH-coenzyme Q reductase) (nduFs4)(partial) [Methylobacterium extorquens AM1] gi|254562306|ref|YP_003069401.1| NADH dehydrogenase (ubiquinone) Fe-S protein 4 [Methylobacterium extorquens DM4] gi|163664155|gb|ABY31522.1| ETC complex I subunit conserved region [Methylobacterium extorquens PA1] gi|218523690|gb|ACK84275.1| ETC complex I subunit conserved region [Methylobacterium chloromethanicum CM4] gi|240009858|gb|ACS41084.1| putative NADH dehydrogenase (ubiquinone) Fe-S protein 4 (18kD) (NADH-coenzyme Q reductase) (nduFs4)(partial) [Methylobacterium extorquens AM1] gi|254269584|emb|CAX25554.1| putative NADH dehydrogenase (ubiquinone) Fe-S protein 4 (18kD) (NADH-coenzyme Q reductase) (nduFs4) (partial) [Methylobacterium extorquens DM4] Length = 103 Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 34/79 (43%), Positives = 48/79 (60%), Gaps = 1/79 (1%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKE-SQ 59 +LEF++ P +PL+G+T S D LQQV+L F + + A YA GI Y V + ++ Sbjct: 25 VLEFDQTEPRETDPLMGWTGSSDMLQQVRLEFDTSDEAVAYAKASGIAYRVEETPPPIAR 84 Query: 60 KELSYQRNFSYDRLEPWTH 78 K LSY NF ++R PWTH Sbjct: 85 KGLSYSDNFKFNRTAPWTH 103 >gi|192291186|ref|YP_001991791.1| ETC complex I subunit conserved region [Rhodopseudomonas palustris TIE-1] gi|192284935|gb|ACF01316.1| ETC complex I subunit conserved region [Rhodopseudomonas palustris TIE-1] Length = 101 Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 33/77 (42%), Positives = 46/77 (59%) Query: 2 LEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKE 61 L++E TP IEPL+G+TSS D QQV L F + + A Y GI Y +I + ++ Sbjct: 25 LDYEPETPRTIEPLMGWTSSSDMQQQVSLRFHTRDEAVAYCEREGIPYQLIEPKESVRRR 84 Query: 62 LSYQRNFSYDRLEPWTH 78 +Y NF++ R EPWTH Sbjct: 85 AAYADNFAFRRPEPWTH 101 >gi|114707698|ref|ZP_01440593.1| ETC complex I subunit conserved region [Fulvimarina pelagi HTCC2506] gi|114536942|gb|EAU40071.1| ETC complex I subunit conserved region [Fulvimarina pelagi HTCC2506] Length = 101 Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 33/78 (42%), Positives = 47/78 (60%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +L +E P I+PL+GYTSS D L Q++L F + E A +YA + I Y V + + Sbjct: 24 LLIYEPQEPKRIDPLMGYTSSGDMLSQLRLSFETREQAVEYAERNDIPYRVEEPKETKRV 83 Query: 61 ELSYQRNFSYDRLEPWTH 78 ++Y NF YDR +PWTH Sbjct: 84 RVAYADNFKYDRRQPWTH 101 >gi|316934262|ref|YP_004109244.1| ETC complex subunit I conserved region protein [Rhodopseudomonas palustris DX-1] gi|315601976|gb|ADU44511.1| ETC complex I subunit conserved region protein [Rhodopseudomonas palustris DX-1] Length = 101 Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 33/77 (42%), Positives = 46/77 (59%) Query: 2 LEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKE 61 L++E P IEPL+G+TSS D QQV L F + + A Y GI Y VI + +++ Sbjct: 25 LDYEPEKPRTIEPLMGWTSSSDMHQQVSLRFHTRDEAVAYCEREGIPYQVIEPKEPARRR 84 Query: 62 LSYQRNFSYDRLEPWTH 78 +Y NF++ R EPWTH Sbjct: 85 AAYADNFAFRRPEPWTH 101 >gi|217976735|ref|YP_002360882.1| ETC complex I subunit conserved region [Methylocella silvestris BL2] gi|217502111|gb|ACK49520.1| ETC complex I subunit conserved region [Methylocella silvestris BL2] Length = 101 Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 35/78 (44%), Positives = 44/78 (56%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +LEFE +P I+PL+G+TSS D QV+L F + A YA HGI Y V +K Sbjct: 24 LLEFEPASPREIDPLMGWTSSSDMKSQVRLRFGDKDEAIAYAQKHGIVYRVEEPKPHPRK 83 Query: 61 ELSYQRNFSYDRLEPWTH 78 LSY NF R+ WTH Sbjct: 84 ILSYSDNFRSTRIGQWTH 101 >gi|39935603|ref|NP_947879.1| ETC complex I subunit region [Rhodopseudomonas palustris CGA009] gi|39649456|emb|CAE27978.1| possible NADH dehydrogenase (ubiquinone) Fe-S protein 4 (18kD) (NADH-coenzyme Q reductase) [Rhodopseudomonas palustris CGA009] Length = 101 Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 33/77 (42%), Positives = 46/77 (59%) Query: 2 LEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKE 61 L++E TP IEPL+G+TSS D QQV L F + + A Y GI Y +I + ++ Sbjct: 25 LDYEPETPRTIEPLMGWTSSSDMQQQVSLRFHTRDEAVAYCEREGIPYQLIEPKEPVRRR 84 Query: 62 LSYQRNFSYDRLEPWTH 78 +Y NF++ R EPWTH Sbjct: 85 AAYADNFAFRRPEPWTH 101 >gi|86750052|ref|YP_486548.1| ETC complex I subunit region [Rhodopseudomonas palustris HaA2] gi|86573080|gb|ABD07637.1| ETC complex I subunit conserved region [Rhodopseudomonas palustris HaA2] Length = 101 Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 33/77 (42%), Positives = 45/77 (58%) Query: 2 LEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKE 61 L++E P IEPL+G+TSS D QQ+ L F S E A Y GI Y V+ + ++ Sbjct: 25 LDYEPEQPRMIEPLMGWTSSTDMQQQISLRFHSREEAIAYCEREGIPYQVLEPKEPVRRR 84 Query: 62 LSYQRNFSYDRLEPWTH 78 +Y NF++ R EPWTH Sbjct: 85 AAYADNFAFRRGEPWTH 101 >gi|260575336|ref|ZP_05843336.1| ETC complex I subunit conserved region [Rhodobacter sp. SW2] gi|259022596|gb|EEW25892.1| ETC complex I subunit conserved region [Rhodobacter sp. SW2] Length = 103 Score = 64.7 bits (156), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 34/80 (42%), Positives = 48/80 (60%), Gaps = 2/80 (2%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVI-PSCKESQ 59 +LEF + + ++PL+G+TSS D QV+L F S EAAE YAS HGI I P +++ Sbjct: 24 VLEFSQDSAREVDPLMGWTSSTDMDSQVRLQFDSREAAEAYASAHGIDAVAIQPKPRKAN 83 Query: 60 -KELSYQRNFSYDRLEPWTH 78 + Y NF+ +R WTH Sbjct: 84 IRPGGYGDNFATNRRGVWTH 103 >gi|260428109|ref|ZP_05782088.1| NADH-ubiquinone oxidoreductase 18 kda subunit [Citreicella sp. SE45] gi|260422601|gb|EEX15852.1| NADH-ubiquinone oxidoreductase 18 kda subunit [Citreicella sp. SE45] Length = 103 Score = 64.7 bits (156), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 34/79 (43%), Positives = 46/79 (58%), Gaps = 2/79 (2%) Query: 2 LEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIP--SCKESQ 59 LEF +P ++PL+G+TSS DT QV+L F S EAA YA ++GI+ V K + Sbjct: 25 LEFAASSPREVDPLMGWTSSSDTQSQVRLKFDSKEAALDYARENGIEATVQEPHKRKTNV 84 Query: 60 KELSYQRNFSYDRLEPWTH 78 + Y NF+ DR WTH Sbjct: 85 RPRGYAENFAVDRRGAWTH 103 >gi|289607240|emb|CBI60853.1| unnamed protein product [Sordaria macrospora] Length = 110 Score = 64.7 bits (156), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 32/68 (47%), Positives = 41/68 (60%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 MLEFE P +PL G+ S DT +QVKL FPSL+AA YA GI + V+P+ + K Sbjct: 42 MLEFEPAEPKQADPLTGWAGSGDTREQVKLRFPSLDAATDYAKREGIDFHVVPAPERKLK 101 Query: 61 ELSYQRNF 68 +Y NF Sbjct: 102 LQAYADNF 109 >gi|91977005|ref|YP_569664.1| ETC complex I subunit region [Rhodopseudomonas palustris BisB5] gi|91683461|gb|ABE39763.1| ETC complex I subunit conserved region [Rhodopseudomonas palustris BisB5] Length = 101 Score = 64.7 bits (156), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 33/77 (42%), Positives = 44/77 (57%) Query: 2 LEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKE 61 L++E P IEPL+G+TSS D QQV L F + E A Y GI Y V+ ++ Sbjct: 25 LDYEPEQPRMIEPLMGWTSSGDMQQQVSLRFETREEAIAYCEREGIPYQVLEPKTPVRRR 84 Query: 62 LSYQRNFSYDRLEPWTH 78 +Y NF++ R EPWTH Sbjct: 85 AAYADNFAFRRGEPWTH 101 >gi|296116510|ref|ZP_06835120.1| ETC complex I subunit conserved region [Gluconacetobacter hansenii ATCC 23769] gi|295976722|gb|EFG83490.1| ETC complex I subunit conserved region [Gluconacetobacter hansenii ATCC 23769] Length = 101 Score = 64.3 bits (155), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 28/78 (35%), Positives = 48/78 (61%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +LE+ + P +++ L+G+T S+DTL Q++L FP+ +AA YA + I Y + ++ Sbjct: 24 VLEYGQTQPRHVDALMGWTGSRDTLSQLRLQFPTQDAAVAYARHNNIGYDLELPVPRVRR 83 Query: 61 ELSYQRNFSYDRLEPWTH 78 +Y NF DR++ WTH Sbjct: 84 PKAYADNFRSDRIQNWTH 101 >gi|90424280|ref|YP_532650.1| ETC complex I subunit region [Rhodopseudomonas palustris BisB18] gi|90106294|gb|ABD88331.1| ETC complex I subunit conserved region [Rhodopseudomonas palustris BisB18] Length = 125 Score = 64.3 bits (155), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 34/77 (44%), Positives = 45/77 (58%) Query: 2 LEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKE 61 L++E P IEPL+G+TSS DT QQ+ L F S E A Y GI Y VI +++ Sbjct: 49 LDYEPEQPRVIEPLMGWTSSGDTRQQLTLHFHSREDAIAYCECEGIPYQVIEPKPPARRR 108 Query: 62 LSYQRNFSYDRLEPWTH 78 +Y NF++ R PWTH Sbjct: 109 AAYSDNFAFRRDMPWTH 125 >gi|260431430|ref|ZP_05785401.1| NADH-ubiquinone oxidoreductase family protein [Silicibacter lacuscaerulensis ITI-1157] gi|260415258|gb|EEX08517.1| NADH-ubiquinone oxidoreductase family protein [Silicibacter lacuscaerulensis ITI-1157] Length = 103 Score = 64.3 bits (155), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 33/80 (41%), Positives = 46/80 (57%), Gaps = 2/80 (2%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKE--S 58 +LEF + ++PL+G+TSS DT QV+L F + E A YA +HGI V+ K + Sbjct: 24 VLEFAPASAREVDPLMGWTSSSDTQTQVRLRFDTKEEALHYAREHGIDAQVVEPHKRKPN 83 Query: 59 QKELSYQRNFSYDRLEPWTH 78 + Y NF+ DR PWTH Sbjct: 84 IRPRGYGENFATDRRGPWTH 103 >gi|259415581|ref|ZP_05739502.1| ETC complex I subunit conserved region [Silicibacter sp. TrichCH4B] gi|259348811|gb|EEW60573.1| ETC complex I subunit conserved region [Silicibacter sp. TrichCH4B] Length = 103 Score = 63.5 bits (153), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 33/80 (41%), Positives = 48/80 (60%), Gaps = 2/80 (2%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVI--PSCKES 58 +LE+ + ++PL+G+TSS DT QV+L F S E A +YA DHGI+ V + K + Sbjct: 24 VLEYAPASAREVDPLMGWTSSSDTQSQVRLKFDSKEEALEYAEDHGIEVEVQDPKTRKPN 83 Query: 59 QKELSYQRNFSYDRLEPWTH 78 + Y NF+ +R PWTH Sbjct: 84 LRAGGYGENFATNRRGPWTH 103 >gi|163736818|ref|ZP_02144236.1| NADH-ubiquinone oxidoreductase family protein [Phaeobacter gallaeciensis BS107] gi|161389422|gb|EDQ13773.1| NADH-ubiquinone oxidoreductase family protein [Phaeobacter gallaeciensis BS107] Length = 103 Score = 63.5 bits (153), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 33/80 (41%), Positives = 47/80 (58%), Gaps = 2/80 (2%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVI--PSCKES 58 +L+F + ++PL+G+TSS DT QV+L F S EAA +YA +GI V S K + Sbjct: 24 VLDFVPSSAREVDPLMGWTSSHDTQSQVRLRFDSKEAALEYAEANGIDAVVTEPKSRKAN 83 Query: 59 QKELSYQRNFSYDRLEPWTH 78 + Y NF+ +R PWTH Sbjct: 84 VRAGGYGENFATNRRAPWTH 103 >gi|319777820|ref|YP_004134250.1| etc complex i subunit conserved region [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317171539|gb|ADV15076.1| ETC complex I subunit conserved region [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 255 Score = 63.2 bits (152), Expect = 1e-08, Method: Composition-based stats. Identities = 35/71 (49%), Positives = 45/71 (63%), Gaps = 1/71 (1%) Query: 2 LEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKE 61 L FE T P+IEPL+GYT +DTL QV+L FP+LEAA +YA G+ Y V SQ + Sbjct: 66 LIFEPRTAPFIEPLMGYTGGRDTLTQVQLDFPTLEAAIRYAERQGLSYVVQAPSSGSQAK 125 Query: 62 LSYQRNFSYDR 72 +S R S +R Sbjct: 126 VS-NRQASEER 135 >gi|56695396|ref|YP_165744.1| NADH-ubiquinone oxidoreductase family protein [Ruegeria pomeroyi DSS-3] gi|56677133|gb|AAV93799.1| NADH-ubiquinone oxidoreductase family protein [Ruegeria pomeroyi DSS-3] Length = 103 Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 33/80 (41%), Positives = 44/80 (55%), Gaps = 2/80 (2%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKE--S 58 +LE+ + ++PL+G+TSS DT QV+L F S E A YA HGI V K + Sbjct: 24 VLEYAPGSAREVDPLMGWTSSSDTQSQVRLRFDSKEEALDYARAHGIDAVVTEPHKRKPN 83 Query: 59 QKELSYQRNFSYDRLEPWTH 78 + Y NF+ DR PWTH Sbjct: 84 LRARGYGENFATDRRGPWTH 103 >gi|304391353|ref|ZP_07373295.1| ETC complex I subunit region [Ahrensia sp. R2A130] gi|303295582|gb|EFL89940.1| ETC complex I subunit region [Ahrensia sp. R2A130] Length = 101 Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 31/78 (39%), Positives = 44/78 (56%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +L++E +PL+GYT++ DTL QV + F + E A YA + I Y V + + Sbjct: 24 VLKYEAEGRKGTDPLMGYTATSDTLSQVSMRFETREDAVDYAERNDIAYRVQEPKEARRS 83 Query: 61 ELSYQRNFSYDRLEPWTH 78 +SY NF YDR PWTH Sbjct: 84 AVSYSDNFKYDRKVPWTH 101 >gi|163743674|ref|ZP_02151049.1| NADH-ubiquinone oxidoreductase family protein [Phaeobacter gallaeciensis 2.10] gi|161383041|gb|EDQ07435.1| NADH-ubiquinone oxidoreductase family protein [Phaeobacter gallaeciensis 2.10] Length = 103 Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 32/80 (40%), Positives = 47/80 (58%), Gaps = 2/80 (2%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVI--PSCKES 58 +L+F + ++PL+G+TSS DT QV+L F + EAA +YA +GI V S K + Sbjct: 24 VLDFVPSSAREVDPLMGWTSSHDTQSQVRLRFDTKEAALEYAEANGIDAVVTEPKSRKAN 83 Query: 59 QKELSYQRNFSYDRLEPWTH 78 + Y NF+ +R PWTH Sbjct: 84 VRAGGYGENFATNRRAPWTH 103 >gi|192973032|gb|ACF06932.1| ETC complex I subunit conserved region protein [uncultured Roseobacter sp.] Length = 103 Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 32/80 (40%), Positives = 45/80 (56%), Gaps = 2/80 (2%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQ- 59 +LEF I+PL+G+TSS DT QV+L F + +AA YA HGIQ ++ K + Sbjct: 24 VLEFAHSEARRIDPLMGWTSSDDTQTQVRLQFDTKDAAVDYAERHGIQATIVEPQKRATN 83 Query: 60 -KELSYQRNFSYDRLEPWTH 78 + Y NF+ +R WTH Sbjct: 84 IRPGGYGENFATNRRGVWTH 103 >gi|85717211|ref|ZP_01048168.1| ETC complex I subunit conserved region protein [Nitrobacter sp. Nb-311A] gi|85695991|gb|EAQ33892.1| ETC complex I subunit conserved region protein [Nitrobacter sp. Nb-311A] Length = 101 Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 32/77 (41%), Positives = 44/77 (57%) Query: 2 LEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKE 61 L++E IEPL+G+TSS D QQ+ L F + E A Y GI Y VI ++ Sbjct: 25 LDYEPEQARVIEPLMGWTSSGDMKQQITLRFETREDAIAYCEREGIPYQVIEPKVTVPRK 84 Query: 62 LSYQRNFSYDRLEPWTH 78 +Y NF++ R+EPWTH Sbjct: 85 AAYADNFAFRRIEPWTH 101 >gi|83858257|ref|ZP_00951779.1| NADH-ubiquinone oxidoreductase-related protein [Oceanicaulis alexandrii HTCC2633] gi|83853080|gb|EAP90932.1| NADH-ubiquinone oxidoreductase-related protein [Oceanicaulis alexandrii HTCC2633] Length = 101 Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 31/78 (39%), Positives = 45/78 (57%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +LEFE +PL+G++S+ D +Q+ L F S + A YA HGI + V + + +K Sbjct: 24 VLEFEPAMAKRPDPLMGWSSTSDMRRQIHLNFESKDEAVSYAQRHGIAFQVREARETPRK 83 Query: 61 ELSYQRNFSYDRLEPWTH 78 SY NF DR EPW+H Sbjct: 84 IKSYASNFDADRKEPWSH 101 >gi|154248102|ref|YP_001419060.1| ETC complex I subunit region [Xanthobacter autotrophicus Py2] gi|154162187|gb|ABS69403.1| ETC complex I subunit conserved region [Xanthobacter autotrophicus Py2] Length = 101 Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 29/78 (37%), Positives = 45/78 (57%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +LE+E +EPL+GYTSS D Q++L F + E A YA GI + V + ++ Sbjct: 24 VLEYEPEHARMVEPLMGYTSSADMRSQIRLKFETKEEAVAYAQKRGIPFQVFEPHETGRR 83 Query: 61 ELSYQRNFSYDRLEPWTH 78 ++Y NF++ R+ WTH Sbjct: 84 RMAYSDNFAFTRVGQWTH 101 >gi|330994391|ref|ZP_08318317.1| NADH dehydrogenase [ubiquinone] iron-sulfur protein 4 [Gluconacetobacter sp. SXCC-1] gi|329758517|gb|EGG75035.1| NADH dehydrogenase [ubiquinone] iron-sulfur protein 4 [Gluconacetobacter sp. SXCC-1] Length = 103 Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 26/78 (33%), Positives = 48/78 (61%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +L++ + P +++ L+G+T S DT Q++L FP ++A YA+ +GI + + ++ Sbjct: 26 VLDYGQNRPRHVDALMGWTGSADTPSQLRLQFPDQDSAVAYATHNGIAFDIEIPAPRIRR 85 Query: 61 ELSYQRNFSYDRLEPWTH 78 +Y NF YDR++ WTH Sbjct: 86 PKAYADNFRYDRIQNWTH 103 >gi|89069291|ref|ZP_01156654.1| NADH-ubiquinone oxidoreductase family protein [Oceanicola granulosus HTCC2516] gi|89045167|gb|EAR51235.1| NADH-ubiquinone oxidoreductase family protein [Oceanicola granulosus HTCC2516] Length = 91 Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 32/80 (40%), Positives = 47/80 (58%), Gaps = 2/80 (2%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQ- 59 +L+F +P ++PL+G+TSS DT QV+L F + EAA YA +HGI+ V K + Sbjct: 12 LLDFAPRSPREVDPLMGWTSSDDTQAQVRLTFDTKEAALAYAEEHGIEVEVREPKKRAAN 71 Query: 60 -KELSYQRNFSYDRLEPWTH 78 + Y NF+ +R WTH Sbjct: 72 IRPGGYGDNFATNRRAVWTH 91 >gi|294084026|ref|YP_003550783.1| NADH-ubiquinone oxidoreductase 18 kDa subunit-like protein [Candidatus Puniceispirillum marinum IMCC1322] gi|292663598|gb|ADE38699.1| NADH-ubiquinone oxidoreductase 18 kDa subunit-like protein [Candidatus Puniceispirillum marinum IMCC1322] Length = 105 Score = 62.0 bits (149), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 30/78 (38%), Positives = 43/78 (55%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +L F + + L+G+ SS DT +QV++ FPS EAA YA HGI + V K Sbjct: 28 VLSFPRSEGARPDSLMGWQSSSDTARQVRMRFPSKEAAIAYAEAHGIDFDVREPTSRKVK 87 Query: 61 ELSYQRNFSYDRLEPWTH 78 +Y NF+++R WTH Sbjct: 88 PRAYADNFAFNRKGAWTH 105 >gi|99079984|ref|YP_612138.1| ETC complex I subunit region [Ruegeria sp. TM1040] gi|99036264|gb|ABF62876.1| ETC complex I subunit conserved region [Ruegeria sp. TM1040] Length = 103 Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 32/80 (40%), Positives = 47/80 (58%), Gaps = 2/80 (2%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVI--PSCKES 58 +LE+ ++PL+G+TSS DT QV+L F + E A +YA DHGI+ V + K + Sbjct: 24 VLEYAPADAREVDPLMGWTSSSDTQSQVRLKFDTKEEALEYADDHGIEVEVHEPKTRKPN 83 Query: 59 QKELSYQRNFSYDRLEPWTH 78 + Y NF+ +R PWTH Sbjct: 84 LRAGGYGENFATNRRGPWTH 103 >gi|154253416|ref|YP_001414240.1| ETC complex I subunit region [Parvibaculum lavamentivorans DS-1] gi|154157366|gb|ABS64583.1| ETC complex I subunit conserved region [Parvibaculum lavamentivorans DS-1] Length = 218 Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 32/78 (41%), Positives = 44/78 (56%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +LEFE + +EPL+G+TSS+DT QV L F S E A YA HG++Y + + Sbjct: 141 VLEFEPGSARDVEPLMGWTSSRDTNAQVLLRFDSKEEAVAYAEKHGVEYQLFEPKPRRRT 200 Query: 61 ELSYQRNFSYDRLEPWTH 78 +Y NF + R WTH Sbjct: 201 IKAYADNFKFGRQGLWTH 218 >gi|294676923|ref|YP_003577538.1| NDUFA4 family NADH ubiquinone oxidoreductase subunit [Rhodobacter capsulatus SB 1003] gi|294475743|gb|ADE85131.1| NADH ubiquinone oxidoreductase subunit, NDUFA4 family [Rhodobacter capsulatus SB 1003] Length = 103 Score = 61.2 bits (147), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 29/79 (36%), Positives = 44/79 (55%), Gaps = 2/79 (2%) Query: 2 LEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKE--SQ 59 L+F + ++PL+G+T + DT QV+L F S EAAE +A G+ Y V K + Sbjct: 25 LDFLQADARNLDPLMGWTGTDDTQAQVRLKFDSREAAEAFAKARGLDYTVTEGHKRKVNI 84 Query: 60 KELSYQRNFSYDRLEPWTH 78 + + Y NF+ +R WTH Sbjct: 85 RPMGYGENFATNRRANWTH 103 >gi|260461336|ref|ZP_05809584.1| ETC complex I subunit conserved region [Mesorhizobium opportunistum WSM2075] gi|259032873|gb|EEW34136.1| ETC complex I subunit conserved region [Mesorhizobium opportunistum WSM2075] Length = 197 Score = 60.8 bits (146), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 32/64 (50%), Positives = 41/64 (64%), Gaps = 2/64 (3%) Query: 2 LEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCV--IPSCKESQ 59 L FE+ P IEPL+GYT S DTL QV+L FP+++AA YA G+ Y V P+ +ES Sbjct: 61 LIFERRMAPVIEPLMGYTGSGDTLTQVELDFPTVQAAIDYAERQGLAYSVQGSPAAEESS 120 Query: 60 KELS 63 E S Sbjct: 121 VETS 124 >gi|83953449|ref|ZP_00962171.1| NADH-ubiquinone oxidoreductase family protein [Sulfitobacter sp. NAS-14.1] gi|83842417|gb|EAP81585.1| NADH-ubiquinone oxidoreductase family protein [Sulfitobacter sp. NAS-14.1] Length = 91 Score = 60.8 bits (146), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 33/80 (41%), Positives = 46/80 (57%), Gaps = 2/80 (2%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCV-IPSCKESQ 59 +LEF+ I+PL+G+TSSKDT QV+L F + E A +YA DH I V P+ + + Sbjct: 12 LLEFDPEHAREIDPLMGWTSSKDTQTQVRLQFATKEEAVEYARDHNIDALVQDPNKRRAN 71 Query: 60 -KELSYQRNFSYDRLEPWTH 78 + Y NF+ R WTH Sbjct: 72 VRAGGYGENFATGRRGAWTH 91 >gi|149202253|ref|ZP_01879226.1| ETC complex I subunit conserved region [Roseovarius sp. TM1035] gi|149144351|gb|EDM32382.1| ETC complex I subunit conserved region [Roseovarius sp. TM1035] Length = 103 Score = 60.8 bits (146), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 32/80 (40%), Positives = 48/80 (60%), Gaps = 2/80 (2%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVI-PSCKESQ 59 +LEF T ++PL+G+TS+ DT QV+L F + EAA +YA +HGI V P ++ Sbjct: 24 VLEFVSETAREVDPLMGWTSNADTQTQVRLRFETKEAALQYAKEHGIDAVVQEPQARKPN 83 Query: 60 -KELSYQRNFSYDRLEPWTH 78 + Y NF+ +R + WTH Sbjct: 84 IRPGGYGDNFATNRRQVWTH 103 >gi|159044734|ref|YP_001533528.1| putative ETC complex subunit I conserved region [Dinoroseobacter shibae DFL 12] gi|157912494|gb|ABV93927.1| putative ETC complex I subunit conserved region [Dinoroseobacter shibae DFL 12] Length = 103 Score = 60.8 bits (146), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 32/80 (40%), Positives = 45/80 (56%), Gaps = 2/80 (2%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKE--S 58 +LEF I+PL+G+TSS DT QVKL F + EAA YA +HG++ + K + Sbjct: 24 VLEFAPADARSIDPLMGWTSSSDTQSQVKLRFDTREAALDYAKEHGLEVTITEPKKRKPN 83 Query: 59 QKELSYQRNFSYDRLEPWTH 78 + Y NF+ +R WTH Sbjct: 84 IRPGGYGDNFATNRRTVWTH 103 >gi|319898871|ref|YP_004158964.1| NADH-ubiquinone oxidoreductase [Bartonella clarridgeiae 73] gi|319402835|emb|CBI76386.1| NADH-ubiquinone oxidoreductase [Bartonella clarridgeiae 73] Length = 101 Score = 60.8 bits (146), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 30/78 (38%), Positives = 45/78 (57%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +L++E + IEPL+GYT++ D Q+K+ F + E A +A + I Y V K Q+ Sbjct: 24 ILQYEPVQTKMIEPLMGYTATADINSQIKIRFKTKEEAIAFAVKNAIPYRVENLHKPLQR 83 Query: 61 ELSYQRNFSYDRLEPWTH 78 +SY NF R +PWTH Sbjct: 84 AISYSDNFHNSRQQPWTH 101 >gi|83944408|ref|ZP_00956862.1| NADH-ubiquinone oxidoreductase family protein [Sulfitobacter sp. EE-36] gi|83844731|gb|EAP82614.1| NADH-ubiquinone oxidoreductase family protein [Sulfitobacter sp. EE-36] Length = 103 Score = 60.5 bits (145), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 33/80 (41%), Positives = 46/80 (57%), Gaps = 2/80 (2%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCV-IPSCKESQ 59 +LEF+ I+PL+G+TSSKDT QV+L F + E A +YA DH I V P+ + + Sbjct: 24 LLEFDPEHAREIDPLMGWTSSKDTQTQVRLQFATKEEAVEYARDHNIDALVQDPNKRRAN 83 Query: 60 -KELSYQRNFSYDRLEPWTH 78 + Y NF+ R WTH Sbjct: 84 VRAGGYGENFATGRRGAWTH 103 >gi|182678525|ref|YP_001832671.1| ETC complex I subunit region [Beijerinckia indica subsp. indica ATCC 9039] gi|182634408|gb|ACB95182.1| ETC complex I subunit conserved region [Beijerinckia indica subsp. indica ATCC 9039] Length = 101 Score = 60.5 bits (145), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 32/78 (41%), Positives = 43/78 (55%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +L F+ +P +PL+G+TSS D QV+L F + E A YA +G+ Y V +K Sbjct: 24 LLVFDPASPRSTDPLMGWTSSGDMNSQVRLRFTTKEEAIAYAEKNGLDYRVEEPKLAPRK 83 Query: 61 ELSYQRNFSYDRLEPWTH 78 LSY NF R PWTH Sbjct: 84 ILSYSDNFKSTRAGPWTH 101 >gi|254461814|ref|ZP_05075230.1| NADH-ubiquinone oxidoreductase 18 kda subunit [Rhodobacterales bacterium HTCC2083] gi|206678403|gb|EDZ42890.1| NADH-ubiquinone oxidoreductase 18 kda subunit [Rhodobacteraceae bacterium HTCC2083] Length = 103 Score = 60.5 bits (145), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 32/80 (40%), Positives = 47/80 (58%), Gaps = 2/80 (2%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVI-PSCKESQ 59 +LE + ++PL+G+TSS DT QV+L F S EAA YA +GI V P+ +++ Sbjct: 24 VLEHAPASARQVDPLMGWTSSDDTQAQVRLRFESKEAALAYAEANGIDASVREPNKRKAN 83 Query: 60 -KELSYQRNFSYDRLEPWTH 78 ++ Y NF+ DR WTH Sbjct: 84 IRKGGYAENFATDRRGAWTH 103 >gi|240850718|ref|YP_002972118.1| NADH-ubiquinone oxidoreductase [Bartonella grahamii as4aup] gi|240267841|gb|ACS51429.1| NADH-ubiquinone oxidoreductase [Bartonella grahamii as4aup] Length = 101 Score = 60.1 bits (144), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 28/78 (35%), Positives = 42/78 (53%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +LE+E + +EPL+GYT++ D QV++ F E A +A + I Y V ++ Sbjct: 24 ILEYEPVKAKMLEPLMGYTATSDMNNQVRIRFNRKEEAIAFARKNAISYRVEKKRTSIRR 83 Query: 61 ELSYQRNFSYDRLEPWTH 78 +SY NF DR WTH Sbjct: 84 AISYSDNFRSDRQHSWTH 101 >gi|83951497|ref|ZP_00960229.1| NADH-ubiquinone oxidoreductase family protein [Roseovarius nubinhibens ISM] gi|83836503|gb|EAP75800.1| NADH-ubiquinone oxidoreductase family protein [Roseovarius nubinhibens ISM] Length = 91 Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 31/80 (38%), Positives = 46/80 (57%), Gaps = 2/80 (2%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVI--PSCKES 58 +LE+ ++PL+G+TSS DT QV++ FP+ EAA YA +HGI V + K + Sbjct: 12 VLEYVADQARAVDPLMGWTSSADTQAQVRINFPTKEAALDYAQEHGIDAVVQEPKTRKPN 71 Query: 59 QKELSYQRNFSYDRLEPWTH 78 + Y NF+ +R WTH Sbjct: 72 IRPGGYGENFATNRRGVWTH 91 >gi|209883321|ref|YP_002287178.1| NADH-ubiquinone oxidoreductase 18 kd subunit [Oligotropha carboxidovorans OM5] gi|209871517|gb|ACI91313.1| NADH-ubiquinone oxidoreductase 18 kd subunit [Oligotropha carboxidovorans OM5] Length = 159 Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 27/50 (54%), Positives = 35/50 (70%) Query: 2 LEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCV 51 L FE+ T P+IEPL+GYT DTL QV+L FP+ E+A +YA G+ Y V Sbjct: 34 LIFERRTAPFIEPLMGYTGGDDTLTQVELAFPTPESAIRYAERQGLTYIV 83 >gi|49475707|ref|YP_033748.1| NADH-ubiquinone oxidoreductase [Bartonella henselae str. Houston-1] gi|49238514|emb|CAF27746.1| NADH-ubiquinone oxidoreductase [Bartonella henselae str. Houston-1] Length = 101 Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 30/78 (38%), Positives = 44/78 (56%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +L++E I +EPL+GYT++ D QVK+ F E A +A + I Y V K ++ Sbjct: 24 ILQYEPIKAKMLEPLMGYTATSDMNNQVKIRFNKKEEAVAFARKNAIPYRVEKMHKPIRR 83 Query: 61 ELSYQRNFSYDRLEPWTH 78 +SY NF DR + WTH Sbjct: 84 VVSYSDNFRSDRQQSWTH 101 >gi|319404188|emb|CBI77781.1| NADH-ubiquinone oxidoreductase [Bartonella rochalimae ATCC BAA-1498] Length = 101 Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 29/78 (37%), Positives = 45/78 (57%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +L++E + IEPL+GYT++ D Q+K+ F + E A +A + I Y V K ++ Sbjct: 24 ILQYEPVQAKMIEPLMGYTATSDINSQIKIRFQTKEEAINFAIKNAIPYRVENLHKALRR 83 Query: 61 ELSYQRNFSYDRLEPWTH 78 +SY NF R +PWTH Sbjct: 84 AISYSDNFHSSRQQPWTH 101 >gi|114570046|ref|YP_756726.1| ETC complex I subunit region [Maricaulis maris MCS10] gi|114340508|gb|ABI65788.1| ETC complex I subunit conserved region [Maricaulis maris MCS10] Length = 101 Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 31/78 (39%), Positives = 43/78 (55%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +LEF +PL+G+TSS D Q+KL F S + A YA GI + V+ + + Sbjct: 24 VLEFSPEMAKRADPLMGWTSSSDMRGQIKLDFDSQDDAVAYAKRQGIPFQVVEPQEPKRY 83 Query: 61 ELSYQRNFSYDRLEPWTH 78 SY NFS DR +PW+H Sbjct: 84 SKSYSANFSADRKQPWSH 101 >gi|126727447|ref|ZP_01743281.1| NADH-ubiquinone oxidoreductase family protein [Rhodobacterales bacterium HTCC2150] gi|126703227|gb|EBA02326.1| NADH-ubiquinone oxidoreductase family protein [Rhodobacterales bacterium HTCC2150] Length = 104 Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 30/80 (37%), Positives = 44/80 (55%), Gaps = 2/80 (2%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVI--PSCKES 58 +LEF+ ++PL+G+T S DT QV L F + EAA+ YA ++GI V K + Sbjct: 25 VLEFDASESQQVDPLMGWTGSSDTQSQVHLRFDTKEAAQAYAEENGIMAQVTEPQKRKAN 84 Query: 59 QKELSYQRNFSYDRLEPWTH 78 + Y NF+ +R WTH Sbjct: 85 VRAAGYAENFATNRRGVWTH 104 >gi|85707214|ref|ZP_01038300.1| NADH-ubiquinone oxidoreductase family protein [Roseovarius sp. 217] gi|85668268|gb|EAQ23143.1| NADH-ubiquinone oxidoreductase family protein [Roseovarius sp. 217] Length = 103 Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 33/80 (41%), Positives = 46/80 (57%), Gaps = 2/80 (2%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIP--SCKES 58 +LEF T ++PL+G+TS+ DT QV+L F S EAA +YA D GI V + K + Sbjct: 24 VLEFVSETAREVDPLMGWTSNADTQAQVRLRFESKEAALQYAKDQGIDAVVQEPHARKPN 83 Query: 59 QKELSYQRNFSYDRLEPWTH 78 + Y NF+ R + WTH Sbjct: 84 IRPGGYGDNFATSRRQVWTH 103 >gi|49474321|ref|YP_032363.1| NADH-ubiquinone oxidoreductase [Bartonella quintana str. Toulouse] gi|49239825|emb|CAF26218.1| NADH-ubiquinone oxidoreductase [Bartonella quintana str. Toulouse] Length = 101 Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 28/78 (35%), Positives = 45/78 (57%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +L++E I +EPL+GYT++ D QV++ F E A +A + I Y V + + ++ Sbjct: 24 ILQYEPIQAKMLEPLMGYTATSDMNNQVRIRFNRKEEAIAFARKNAIPYRVEKTHRPIRR 83 Query: 61 ELSYQRNFSYDRLEPWTH 78 +SY NF DR + WTH Sbjct: 84 AVSYSDNFRSDRQQSWTH 101 >gi|190890950|ref|YP_001977492.1| hypothetical protein RHECIAT_CH0001333 [Rhizobium etli CIAT 652] gi|190696229|gb|ACE90314.1| hypothetical conserved protein [Rhizobium etli CIAT 652] Length = 203 Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 27/48 (56%), Positives = 36/48 (75%) Query: 2 LEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQY 49 L FE+ + P+IEPLLGYT S +TL QV+L FP+LE+A +YA G+ Y Sbjct: 64 LVFERCSAPFIEPLLGYTGSGETLVQVELKFPTLESAIRYAERQGLDY 111 >gi|218516452|ref|ZP_03513292.1| hypothetical protein Retl8_23756 [Rhizobium etli 8C-3] Length = 203 Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 27/48 (56%), Positives = 36/48 (75%) Query: 2 LEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQY 49 L FE+ + P+IEPLLGYT S +TL QV+L FP+LE+A +YA G+ Y Sbjct: 64 LVFERCSAPFIEPLLGYTGSGETLVQVELKFPTLESAIRYAERQGLDY 111 >gi|254796752|ref|YP_003081588.1| NADH:ubiquinone oxidoreductase 18 kda subunit [Neorickettsia risticii str. Illinois] gi|254589997|gb|ACT69359.1| NADH:ubiquinone oxidoreductase 18 kda subunit [Neorickettsia risticii str. Illinois] Length = 96 Score = 59.3 bits (142), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 31/68 (45%), Positives = 41/68 (60%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +L+F P Y+EPL+G+ S+DT+ Q+ L F S EAAE YA +GI Y VI + K Sbjct: 28 VLKFCSDEPKYVEPLMGWVGSRDTITQLVLKFNSREAAEAYAKKNGIDYTVIMPQQAKVK 87 Query: 61 ELSYQRNF 68 SY NF Sbjct: 88 PKSYADNF 95 >gi|254485926|ref|ZP_05099131.1| NADH-ubiquinone oxidoreductase 18 kda subunit [Roseobacter sp. GAI101] gi|214042795|gb|EEB83433.1| NADH-ubiquinone oxidoreductase 18 kda subunit [Roseobacter sp. GAI101] Length = 91 Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 32/80 (40%), Positives = 43/80 (53%), Gaps = 2/80 (2%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQ- 59 +LEF + + ++PL+G+TSS DT QVKL F + E A +YA HGI V K Sbjct: 12 LLEFNQESAREVDPLMGWTSSNDTQTQVKLRFETKEEAVEYARSHGIDAVVQEPHKRRAN 71 Query: 60 -KELSYQRNFSYDRLEPWTH 78 + Y NF+ R WTH Sbjct: 72 IRPGGYGENFATARRGAWTH 91 >gi|239834984|ref|ZP_04683312.1| ETC complex I subunit region [Ochrobactrum intermedium LMG 3301] gi|239823047|gb|EEQ94616.1| ETC complex I subunit region [Ochrobactrum intermedium LMG 3301] Length = 254 Score = 59.3 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 27/50 (54%), Positives = 36/50 (72%) Query: 2 LEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCV 51 L FE+ T P+IEPL+GYT DTL QV+L FP+L++A +YA G+ Y V Sbjct: 64 LVFERRTAPFIEPLMGYTGGDDTLTQVELSFPTLQSAIRYAERQGLTYMV 113 >gi|269959155|ref|YP_003328944.1| putative oxidoreductase [Anaplasma centrale str. Israel] gi|269848986|gb|ACZ49630.1| putative oxidoreductase [Anaplasma centrale str. Israel] Length = 104 Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 30/72 (41%), Positives = 41/72 (56%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 ++EFE Y + L+G+ S+DT QQ+KL F S EAA YA GI Y V+P ++ Sbjct: 31 LMEFEPSCSLYRDSLMGWVGSRDTAQQIKLRFSSREAAISYAETRGISYVVLPEQATRKQ 90 Query: 61 ELSYQRNFSYDR 72 SY NF +R Sbjct: 91 PKSYSENFLRNR 102 >gi|329114566|ref|ZP_08243325.1| ETC Complex I Subunit Region [Acetobacter pomorum DM001] gi|326696046|gb|EGE47728.1| ETC Complex I Subunit Region [Acetobacter pomorum DM001] Length = 125 Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 29/78 (37%), Positives = 41/78 (52%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 + E+ + P L+G+T S D Q+ L+F S EAAE YA I Y V + ++ Sbjct: 48 VFEYGQSAPRKQSALMGWTGSADPQSQIHLYFDSREAAEAYAQREHIAYVVEETAPRMRR 107 Query: 61 ELSYQRNFSYDRLEPWTH 78 Y NF YDR++ WTH Sbjct: 108 PKVYADNFRYDRIQNWTH 125 >gi|258542836|ref|YP_003188269.1| oxidoreductase [Acetobacter pasteurianus IFO 3283-01] gi|256633914|dbj|BAH99889.1| oxidoreductase [Acetobacter pasteurianus IFO 3283-01] gi|256636973|dbj|BAI02942.1| oxidoreductase [Acetobacter pasteurianus IFO 3283-03] gi|256640026|dbj|BAI05988.1| oxidoreductase [Acetobacter pasteurianus IFO 3283-07] gi|256643082|dbj|BAI09037.1| oxidoreductase [Acetobacter pasteurianus IFO 3283-22] gi|256646137|dbj|BAI12085.1| oxidoreductase [Acetobacter pasteurianus IFO 3283-26] gi|256649190|dbj|BAI15131.1| oxidoreductase [Acetobacter pasteurianus IFO 3283-32] gi|256652177|dbj|BAI18111.1| oxidoreductase [Acetobacter pasteurianus IFO 3283-01-42C] gi|256655234|dbj|BAI21161.1| oxidoreductase [Acetobacter pasteurianus IFO 3283-12] Length = 101 Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 29/78 (37%), Positives = 41/78 (52%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 + E+ + P L+G+T S D Q+ L+F S EAAE YA I Y V + ++ Sbjct: 24 VFEYGQSAPHKQSALMGWTGSADPQSQIHLYFDSREAAEAYAQREHIAYVVEETAPRMRR 83 Query: 61 ELSYQRNFSYDRLEPWTH 78 Y NF YDR++ WTH Sbjct: 84 PKVYADNFRYDRIQNWTH 101 >gi|163793090|ref|ZP_02187066.1| probable NADH-ubiquinone oxidoreductase-related protein [alpha proteobacterium BAL199] gi|159181736|gb|EDP66248.1| probable NADH-ubiquinone oxidoreductase-related protein [alpha proteobacterium BAL199] Length = 101 Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 28/78 (35%), Positives = 44/78 (56%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +LE+ T EPL+G+ SS DT QV++ F + E A +A HG Y V+ + + + Sbjct: 24 VLEYRAETARIPEPLMGWVSSGDTTNQVRIPFDTREEAVTFAKRHGFAYSVVEPHERAPR 83 Query: 61 ELSYQRNFSYDRLEPWTH 78 +Y NF+++R WTH Sbjct: 84 PKAYADNFAFNRKINWTH 101 >gi|73667404|ref|YP_303420.1| ETC complex I subunit region [Ehrlichia canis str. Jake] gi|72394545|gb|AAZ68822.1| ETC complex I subunit conserved region [Ehrlichia canis str. Jake] Length = 97 Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 31/71 (43%), Positives = 40/71 (56%) Query: 2 LEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKE 61 LEFE YIEPL+ +T S DT QQ++LFF + E A YA H I Y V+ + + Sbjct: 25 LEFEPSCTQYIEPLMKWTGSHDTRQQIRLFFKTKELAIAYAIAHNIDYIVLQNNSRTTSA 84 Query: 62 LSYQRNFSYDR 72 SY NF+ R Sbjct: 85 KSYASNFTRLR 95 >gi|84683842|ref|ZP_01011745.1| NADH-ubiquinone oxidoreductase family protein [Maritimibacter alkaliphilus HTCC2654] gi|84668585|gb|EAQ15052.1| NADH-ubiquinone oxidoreductase family protein [Rhodobacterales bacterium HTCC2654] Length = 103 Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 30/80 (37%), Positives = 47/80 (58%), Gaps = 2/80 (2%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIP--SCKES 58 +L+F + I+PL+G+TSS DT QV++ F + EAA +YA + GI V+ K + Sbjct: 24 VLDFAQDEAREIDPLMGWTSSSDTQSQVRIRFATKEAAVEYAKEKGIDAVVMEPHKRKAN 83 Query: 59 QKELSYQRNFSYDRLEPWTH 78 + Y NF+ +R + WTH Sbjct: 84 IRPGGYGDNFATNRRQVWTH 103 >gi|84516970|ref|ZP_01004327.1| NADH-ubiquinone oxidoreductase family protein [Loktanella vestfoldensis SKA53] gi|84509088|gb|EAQ05548.1| NADH-ubiquinone oxidoreductase family protein [Loktanella vestfoldensis SKA53] Length = 108 Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 30/69 (43%), Positives = 43/69 (62%), Gaps = 2/69 (2%) Query: 12 IEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCV-IPSCKESQ-KELSYQRNFS 69 I+PL+G+TSS DT QV+L+F S EAA YA ++GI+ V P ++ + Y NF+ Sbjct: 40 IDPLMGWTSSSDTQAQVRLYFDSKEAALDYAHENGIEAVVQDPKLRKPNIRAGGYGENFA 99 Query: 70 YDRLEPWTH 78 +R WTH Sbjct: 100 TNRRGAWTH 108 >gi|300022583|ref|YP_003755194.1| ETC complex I subunit conserved region [Hyphomicrobium denitrificans ATCC 51888] gi|299524404|gb|ADJ22873.1| ETC complex I subunit conserved region [Hyphomicrobium denitrificans ATCC 51888] Length = 101 Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 30/78 (38%), Positives = 41/78 (52%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +LEF TP +PL+G+TS++DT QV+L F + E A YA G+ Y + Sbjct: 24 VLEFAPATPRAADPLMGWTSTRDTQTQVRLEFETKEEAIAYAVREGLSYSLAEPKPRKPI 83 Query: 61 ELSYQRNFSYDRLEPWTH 78 SY NF + R WTH Sbjct: 84 RKSYADNFRFGRATNWTH 101 >gi|319407206|emb|CBI80845.1| NADH-ubiquinone oxidoreductase [Bartonella sp. 1-1C] Length = 101 Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 29/78 (37%), Positives = 45/78 (57%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +L++E + IEPL+GYT++ D Q+K+ F + E A +A + I Y V K ++ Sbjct: 24 LLQYEPMQAKMIEPLMGYTTTSDINSQIKIRFQTKEEAINFAIKNAIPYRVENLHKTLRR 83 Query: 61 ELSYQRNFSYDRLEPWTH 78 +SY NF R +PWTH Sbjct: 84 VISYSDNFHSSRQQPWTH 101 >gi|89056091|ref|YP_511542.1| ETC complex I subunit protein [Jannaschia sp. CCS1] gi|88865640|gb|ABD56517.1| ETC complex I subunit conserved protein [Jannaschia sp. CCS1] Length = 103 Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 32/80 (40%), Positives = 45/80 (56%), Gaps = 2/80 (2%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVI--PSCKES 58 +LEF I+PL+G+TSS D QV L F + EAA+ YA +GI+ V+ S K + Sbjct: 24 VLEFLPSQARAIDPLMGWTSSSDMDSQVHLRFETAEAAKDYAKANGIEAVVLKPKSRKPN 83 Query: 59 QKELSYQRNFSYDRLEPWTH 78 + Y NF+ +R WTH Sbjct: 84 IRAGGYGENFATNRRGAWTH 103 >gi|146278912|ref|YP_001169071.1| ETC complex I subunit region [Rhodobacter sphaeroides ATCC 17025] gi|145557153|gb|ABP71766.1| ETC complex I subunit conserved region [Rhodobacter sphaeroides ATCC 17025] Length = 103 Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 34/80 (42%), Positives = 43/80 (53%), Gaps = 2/80 (2%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPS--CKES 58 +L FE I+PL+G+TSS DT QV L F S EAA YA H I+ V S + + Sbjct: 24 VLVFESREARDIDPLMGWTSSADTQNQVMLHFDSREAALDYAKAHRIEVEVTESKPRRPN 83 Query: 59 QKELSYQRNFSYDRLEPWTH 78 + Y NF+ DR WTH Sbjct: 84 IRPRGYGENFATDRRGAWTH 103 >gi|319405634|emb|CBI79257.1| NADH-ubiquinone oxidoreductase [Bartonella sp. AR 15-3] Length = 101 Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 29/78 (37%), Positives = 45/78 (57%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +L++E IEPL+GYT++ D Q+K+ F + E A +A + I Y V K ++ Sbjct: 24 ILQYEPAQRKMIEPLMGYTATTDINSQIKIRFQTKEEAINFAIRNAIPYRVENLHKTLRR 83 Query: 61 ELSYQRNFSYDRLEPWTH 78 +SY NF +R +PWTH Sbjct: 84 AISYSDNFHSNRQQPWTH 101 >gi|254417718|ref|ZP_05031442.1| ETC complex I subunit conserved region superfamily [Brevundimonas sp. BAL3] gi|196183895|gb|EDX78871.1| ETC complex I subunit conserved region superfamily [Brevundimonas sp. BAL3] Length = 101 Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 31/77 (40%), Positives = 44/77 (57%) Query: 2 LEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKE 61 LEFE + ++PL+G+TSS D QV+L F S E A YA HGI + + + Sbjct: 25 LEFEPASARSLDPLMGWTSSSDMNGQVRLAFDSKEEAVAYAERHGIPFRLHEPNEPPTIL 84 Query: 62 LSYQRNFSYDRLEPWTH 78 +Y NF+ +R +PWTH Sbjct: 85 KAYADNFAPNRKQPWTH 101 >gi|163868486|ref|YP_001609695.1| NADH-ubiquinone oxidoreductase [Bartonella tribocorum CIP 105476] gi|161018142|emb|CAK01700.1| NADH-ubiquinone oxidoreductase [Bartonella tribocorum CIP 105476] Length = 101 Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 27/78 (34%), Positives = 44/78 (56%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +L++E + +EPL+GYT++ D QV++ F E A +A + I Y V + ++ Sbjct: 24 ILQYEPMKAKMLEPLMGYTATSDMNSQVRIRFNRREEAVAFARRNAIPYRVEKTHASIRR 83 Query: 61 ELSYQRNFSYDRLEPWTH 78 +SY NF DR + WTH Sbjct: 84 AVSYSDNFRSDRQQSWTH 101 >gi|148259708|ref|YP_001233835.1| ETC complex I subunit region [Acidiphilium cryptum JF-5] gi|326403323|ref|YP_004283404.1| NADH-ubiquinone oxidoreductase family protein [Acidiphilium multivorum AIU301] gi|146401389|gb|ABQ29916.1| ETC complex I subunit conserved region [Acidiphilium cryptum JF-5] gi|325050184|dbj|BAJ80522.1| NADH-ubiquinone oxidoreductase family protein [Acidiphilium multivorum AIU301] Length = 103 Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 30/79 (37%), Positives = 43/79 (54%), Gaps = 1/79 (1%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTL-QQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQ 59 +LEFE I+PL+G+T S D + QV+L F + E A YA HGI + + + + Sbjct: 25 VLEFEPAMAKRIDPLMGWTGSGDMMASQVRLSFATREEAIAYAEKHGIAFDLEIPTERHR 84 Query: 60 KELSYQRNFSYDRLEPWTH 78 + +Y NF DR WTH Sbjct: 85 RPKAYADNFRADRRANWTH 103 >gi|221638488|ref|YP_002524750.1| ETC complex I subunit conserved region [Rhodobacter sphaeroides KD131] gi|221159269|gb|ACM00249.1| ETC complex I subunit conserved region [Rhodobacter sphaeroides KD131] Length = 91 Score = 58.2 bits (139), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 34/80 (42%), Positives = 43/80 (53%), Gaps = 2/80 (2%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPS--CKES 58 +L FE I+PL+G+TSS DT QV L F S EAA YA H I+ V + K + Sbjct: 12 VLVFESREARDIDPLMGWTSSADTQNQVVLQFDSREAALDYAKAHRIEVEVTEAKPRKAN 71 Query: 59 QKELSYQRNFSYDRLEPWTH 78 + Y NF+ DR WTH Sbjct: 72 IRPRGYGENFATDRRGAWTH 91 >gi|77462634|ref|YP_352138.1| putative NADH-ubiquinone oxidoreductase-related protein [Rhodobacter sphaeroides 2.4.1] gi|126461526|ref|YP_001042640.1| ETC complex I subunit region [Rhodobacter sphaeroides ATCC 17029] gi|77387052|gb|ABA78237.1| putative NADH-ubiquinone oxidoreductase-related protein [Rhodobacter sphaeroides 2.4.1] gi|126103190|gb|ABN75868.1| ETC complex I subunit conserved region [Rhodobacter sphaeroides ATCC 17029] Length = 103 Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 34/80 (42%), Positives = 43/80 (53%), Gaps = 2/80 (2%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPS--CKES 58 +L FE I+PL+G+TSS DT QV L F S EAA YA H I+ V + K + Sbjct: 24 VLVFESREARDIDPLMGWTSSADTQNQVVLQFDSREAALDYAKAHRIEVEVTEAKPRKAN 83 Query: 59 QKELSYQRNFSYDRLEPWTH 78 + Y NF+ DR WTH Sbjct: 84 IRPRGYGENFATDRRGAWTH 103 >gi|323136404|ref|ZP_08071486.1| ETC complex I subunit conserved region [Methylocystis sp. ATCC 49242] gi|322398478|gb|EFY00998.1| ETC complex I subunit conserved region [Methylocystis sp. ATCC 49242] Length = 103 Score = 57.8 bits (138), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 32/79 (40%), Positives = 46/79 (58%), Gaps = 2/79 (2%) Query: 2 LEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKE--SQ 59 L+F+ +P I+PL+G+TSS D QQV+L F + E A YA +GI Y V + ++ Sbjct: 25 LDFDPESPRTIDPLMGWTSSGDMKQQVRLRFDTKEEAIAYAERNGIPYRVEEPKENLAAR 84 Query: 60 KELSYQRNFSYDRLEPWTH 78 + SY NF R+ WTH Sbjct: 85 RTASYSDNFKTSRIGLWTH 103 >gi|302383026|ref|YP_003818849.1| ETC complex I subunit conserved region [Brevundimonas subvibrioides ATCC 15264] gi|302193654|gb|ADL01226.1| ETC complex I subunit conserved region [Brevundimonas subvibrioides ATCC 15264] Length = 101 Score = 57.8 bits (138), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 30/77 (38%), Positives = 44/77 (57%) Query: 2 LEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKE 61 L+FE + I+PL+G+TSS D QV+L F + E A YA HGI + + + Sbjct: 25 LDFEPASARTIDPLMGWTSSSDMNGQVRLTFETREEAVAYAERHGIPFRLHEPQEAPVIL 84 Query: 62 LSYQRNFSYDRLEPWTH 78 +Y NF+ +R +PWTH Sbjct: 85 KAYADNFATNRKQPWTH 101 >gi|254294218|ref|YP_003060241.1| ETC complex I subunit conserved region [Hirschia baltica ATCC 49814] gi|254042749|gb|ACT59544.1| ETC complex I subunit conserved region [Hirschia baltica ATCC 49814] Length = 101 Score = 57.8 bits (138), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 28/78 (35%), Positives = 43/78 (55%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +LE + I+PL+G+TS+ T Q+++ F S E A YA G+++ V+ + Sbjct: 24 VLEMDVAASRSIDPLMGWTSTDSTETQLRMKFDSSEEAISYAKREGLEFTVVTPRAPKRI 83 Query: 61 ELSYQRNFSYDRLEPWTH 78 +Y NFS DR PWTH Sbjct: 84 IKTYAENFSADRKNPWTH 101 >gi|260459271|ref|ZP_05807526.1| ETC complex I subunit conserved region [Mesorhizobium opportunistum WSM2075] gi|259034825|gb|EEW36081.1| ETC complex I subunit conserved region [Mesorhizobium opportunistum WSM2075] Length = 249 Score = 57.8 bits (138), Expect = 5e-07, Method: Composition-based stats. Identities = 34/81 (41%), Positives = 49/81 (60%), Gaps = 8/81 (9%) Query: 2 LEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVI--PSCKES- 58 L FE+ P IEPL+GYT S DTL QV+L FP+++AA YA G+ Y V P+ ++S Sbjct: 63 LIFERRMAPVIEPLMGYTGSGDTLTQVELDFPTVQAAIDYAERQGLAYSVQVNPAAEKSA 122 Query: 59 -----QKELSYQRNFSYDRLE 74 +K L R+ ++RL+ Sbjct: 123 ESSSAEKRLQAGRDLVWNRLQ 143 >gi|218659396|ref|ZP_03515326.1| hypothetical protein RetlI_06876 [Rhizobium etli IE4771] Length = 104 Score = 57.8 bits (138), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 26/48 (54%), Positives = 36/48 (75%) Query: 2 LEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQY 49 L F++ + P+IEPLLGYT S +TL QV+L FP+LE+A +YA G+ Y Sbjct: 21 LVFDRCSAPFIEPLLGYTGSGETLVQVELKFPTLESAIRYAERQGLDY 68 >gi|319408622|emb|CBI82277.1| NADH-ubiquinone oxidoreductase [Bartonella schoenbuchensis R1] Length = 102 Score = 57.8 bits (138), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 31/79 (39%), Positives = 46/79 (58%), Gaps = 1/79 (1%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKES-Q 59 +L++E +EPL+GYT++ D Q+K+ F E A +A + I Y V SCK S + Sbjct: 24 VLQYEPEQAKMLEPLMGYTATSDMNSQIKIRFKIKEEAIAFALKNSIPYRVENSCKPSFR 83 Query: 60 KELSYQRNFSYDRLEPWTH 78 + +SY NF DR + WTH Sbjct: 84 RAVSYSDNFRSDRQQSWTH 102 >gi|296448674|ref|ZP_06890538.1| ETC complex I subunit conserved region [Methylosinus trichosporium OB3b] gi|296253821|gb|EFH00984.1| ETC complex I subunit conserved region [Methylosinus trichosporium OB3b] Length = 102 Score = 57.8 bits (138), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 32/79 (40%), Positives = 46/79 (58%), Gaps = 1/79 (1%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCV-IPSCKESQ 59 +LEFE+ TP ++PL+G+TSS DT Q++L F + E A YA + + Y V P Sbjct: 24 VLEFERETPRELDPLMGWTSSSDTKAQIRLRFATKEEAISYAERNYLVYRVEEPKPGAKP 83 Query: 60 KELSYQRNFSYDRLEPWTH 78 + +SY NF R+ WTH Sbjct: 84 RLISYSDNFRTQRVGQWTH 102 >gi|218461427|ref|ZP_03501518.1| hypothetical protein RetlK5_18872 [Rhizobium etli Kim 5] Length = 96 Score = 57.8 bits (138), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 26/48 (54%), Positives = 36/48 (75%) Query: 2 LEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQY 49 L F++ + P+IEPLLGYT S +TL QV+L FP+LE+A +YA G+ Y Sbjct: 13 LVFDRCSAPFIEPLLGYTGSGETLVQVELKFPTLESAIRYAERQGLDY 60 >gi|121601871|ref|YP_989064.1| putative NADH dehydrogenase (quinone) subunit [Bartonella bacilliformis KC583] gi|120614048|gb|ABM44649.1| putative NADH dehydrogenase (quinone) subunit [Bartonella bacilliformis KC583] Length = 101 Score = 57.8 bits (138), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 30/78 (38%), Positives = 44/78 (56%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +L++E P EPL+GYT++ D Q+K+ F E A +A + I Y V K S++ Sbjct: 24 ILQYEPERPKMCEPLMGYTATSDMNSQIKIQFKMKEEAIAFAIKNDIPYRVENVYKTSRR 83 Query: 61 ELSYQRNFSYDRLEPWTH 78 +SY NF DR + WTH Sbjct: 84 AISYADNFRSDRQQSWTH 101 >gi|296535524|ref|ZP_06897708.1| NADH-ubiquinone oxidoreductase [Roseomonas cervicalis ATCC 49957] gi|296264150|gb|EFH10591.1| NADH-ubiquinone oxidoreductase [Roseomonas cervicalis ATCC 49957] Length = 107 Score = 57.4 bits (137), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 34/79 (43%), Positives = 41/79 (51%), Gaps = 1/79 (1%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQ- 59 ML F +PL G+ S DT Q+++ F S EAAE YA + I Y V P E+ Sbjct: 29 MLVFAPAEARRQDPLTGWYGSGDTRAQLRISFASQEAAEAYARANNIPYEVEPPRPEAAL 88 Query: 60 KELSYQRNFSYDRLEPWTH 78 K SY NF Y R E WTH Sbjct: 89 KPKSYAENFRYGRAENWTH 107 >gi|329889401|ref|ZP_08267744.1| NADH dehydrogenase ubiquinone iron-sulfur protein 4 [Brevundimonas diminuta ATCC 11568] gi|328844702|gb|EGF94266.1| NADH dehydrogenase ubiquinone iron-sulfur protein 4 [Brevundimonas diminuta ATCC 11568] Length = 101 Score = 57.0 bits (136), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 30/77 (38%), Positives = 44/77 (57%) Query: 2 LEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKE 61 LEFE + I+PL+G+TSS D QV+L F + E A +YA HGI + + + Sbjct: 25 LEFEPASARTIDPLMGWTSSTDMNGQVRLSFDTKEEAVEYAERHGIAFRLHEPNEAPVII 84 Query: 62 LSYQRNFSYDRLEPWTH 78 +Y NF+ +R + WTH Sbjct: 85 KAYADNFATNRKQSWTH 101 >gi|47114839|emb|CAE48344.1| unnamed protein product [Methylocystis sp. SC2] Length = 102 Score = 57.0 bits (136), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 33/80 (41%), Positives = 46/80 (57%), Gaps = 4/80 (5%) Query: 2 LEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCV---IPSCKES 58 L+FE P IEPL+G+TSS D QQV+L F + E A YA +G+ Y + P+ + Sbjct: 24 LDFEPELPRSIEPLMGWTSSADMRQQVRLNFSTKEEAIAYAERNGLPYRLEEPKPNLA-A 82 Query: 59 QKELSYQRNFSYDRLEPWTH 78 ++ SY NF R+ WTH Sbjct: 83 RRGASYSDNFKTSRIGLWTH 102 >gi|88608591|ref|YP_506272.1| putative oxidoreductase [Neorickettsia sennetsu str. Miyayama] gi|88600760|gb|ABD46228.1| putative oxidoreductase [Neorickettsia sennetsu str. Miyayama] Length = 96 Score = 57.0 bits (136), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 29/68 (42%), Positives = 39/68 (57%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +L F P Y+EPL+G+ S+DT+ Q+ L F S E AE YA +GI Y V+ + K Sbjct: 28 VLRFCSEEPKYVEPLMGWVGSRDTITQLVLKFDSREVAEAYAKKNGIDYTVVMPQQAKVK 87 Query: 61 ELSYQRNF 68 SY NF Sbjct: 88 PKSYADNF 95 >gi|27380333|ref|NP_771862.1| hypothetical protein blr5222 [Bradyrhizobium japonicum USDA 110] gi|3087773|emb|CAA05838.1| OrfG [Bradyrhizobium japonicum] gi|27353497|dbj|BAC50487.1| blr5222 [Bradyrhizobium japonicum USDA 110] Length = 238 Score = 57.0 bits (136), Expect = 9e-07, Method: Composition-based stats. Identities = 28/50 (56%), Positives = 34/50 (68%) Query: 2 LEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCV 51 L FE+ + PYIEPL+G+T D L QV+L FPS EAA YA G+QY V Sbjct: 56 LRFERRSAPYIEPLMGWTGDDDPLSQVELSFPSAEAAIAYARRQGLQYSV 105 >gi|227818350|ref|YP_002822321.1| hypothetical protein NGR_b00990 [Sinorhizobium fredii NGR234] gi|227337349|gb|ACP21568.1| hypothetical protein NGR_b00990 [Sinorhizobium fredii NGR234] Length = 247 Score = 56.6 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 25/50 (50%), Positives = 36/50 (72%) Query: 2 LEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCV 51 L F++ + P+IEPL+GYT +DTL QV+L FP+ E+A +YA G+ Y V Sbjct: 64 LVFDRRSAPFIEPLMGYTGDRDTLTQVELDFPTRESAIRYAERQGLTYVV 113 >gi|153011931|ref|YP_001373144.1| ETC complex I subunit region [Ochrobactrum anthropi ATCC 49188] gi|151563819|gb|ABS17315.1| ETC complex I subunit conserved region [Ochrobactrum anthropi ATCC 49188] Length = 250 Score = 56.6 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 25/50 (50%), Positives = 35/50 (70%) Query: 2 LEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCV 51 L FE+ + P+IEPL+GYT D L QV+L FP+L++A +YA G+ Y V Sbjct: 63 LVFERRSAPFIEPLMGYTGGSDPLAQVELEFPTLQSAIRYAKRQGLTYVV 112 >gi|310815601|ref|YP_003963565.1| ETC complex I subunit conserved region [Ketogulonicigenium vulgare Y25] gi|308754336|gb|ADO42265.1| ETC complex I subunit conserved region [Ketogulonicigenium vulgare Y25] Length = 103 Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 29/80 (36%), Positives = 48/80 (60%), Gaps = 2/80 (2%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQ- 59 +LE++ P I+PL+G+ DT Q++L F +L+AA YA+ H I +P+ + + Sbjct: 24 VLEWDASAAPQIDPLMGWIGHGDTQSQMRLQFETLDAALAYAAAHDIDVVTLPTQERAPQ 83 Query: 60 -KELSYQRNFSYDRLEPWTH 78 + L Y NF+ +R EPW+H Sbjct: 84 LRSLGYGENFATNRREPWSH 103 >gi|92117654|ref|YP_577383.1| ETC complex I subunit region [Nitrobacter hamburgensis X14] gi|91800548|gb|ABE62923.1| ETC complex I subunit conserved region [Nitrobacter hamburgensis X14] Length = 102 Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 34/78 (43%), Positives = 46/78 (58%), Gaps = 1/78 (1%) Query: 2 LEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVI-PSCKESQK 60 L++E IEPL+G+TSS D QQ+ L F + E A Y GI Y VI P K + + Sbjct: 25 LDYEPEQARVIEPLMGWTSSGDMKQQITLRFDTREDAIAYCEREGIPYEVIEPKVKAAAR 84 Query: 61 ELSYQRNFSYDRLEPWTH 78 + +Y NF++ R EPWTH Sbjct: 85 KAAYADNFAFRRSEPWTH 102 >gi|254994661|ref|ZP_05276851.1| hypothetical protein AmarM_00353 [Anaplasma marginale str. Mississippi] gi|255002768|ref|ZP_05277732.1| hypothetical protein AmarPR_00343 [Anaplasma marginale str. Puerto Rico] gi|255003902|ref|ZP_05278703.1| hypothetical protein AmarV_00363 [Anaplasma marginale str. Virginia] Length = 96 Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 30/71 (42%), Positives = 39/71 (54%) Query: 2 LEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKE 61 +EFE Y + L+G+ SKDT QQV+L FP+ E A YA GI Y V+ +K Sbjct: 24 MEFEPSCSRYRDSLMGWVGSKDTAQQVRLHFPNKEDAISYAKARGILYVVLQDQATRKKP 83 Query: 62 LSYQRNFSYDR 72 SY NF +R Sbjct: 84 KSYSENFFKNR 94 >gi|56416429|ref|YP_153503.1| hypothetical protein AM093 [Anaplasma marginale str. St. Maries] gi|222474799|ref|YP_002563214.1| hypothetical protein AMF_067 [Anaplasma marginale str. Florida] gi|56387661|gb|AAV86248.1| hypothetical protein AM093 [Anaplasma marginale str. St. Maries] gi|222418935|gb|ACM48958.1| Conserved hypothetical protein [Anaplasma marginale str. Florida] Length = 106 Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 30/71 (42%), Positives = 39/71 (54%) Query: 2 LEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKE 61 +EFE Y + L+G+ SKDT QQV+L FP+ E A YA GI Y V+ +K Sbjct: 34 MEFEPSCSRYRDSLMGWVGSKDTAQQVRLHFPNKEDAISYAKARGILYVVLQDQATRKKP 93 Query: 62 LSYQRNFSYDR 72 SY NF +R Sbjct: 94 KSYSENFFKNR 104 >gi|315499878|ref|YP_004088681.1| etc complex i subunit conserved region [Asticcacaulis excentricus CB 48] gi|315417890|gb|ADU14530.1| ETC complex I subunit conserved region [Asticcacaulis excentricus CB 48] Length = 101 Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 29/78 (37%), Positives = 44/78 (56%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +LEFE + +PL+G+ S+ DT QV+L F + E A YA HGI + +I + Sbjct: 24 VLEFEPASARTPDPLMGWISAADTRTQVRLSFDTKEQAMAYAETHGIPFRLIEPETPPKI 83 Query: 61 ELSYQRNFSYDRLEPWTH 78 +Y NF+ +R + WTH Sbjct: 84 IKAYADNFASNRRQSWTH 101 >gi|126733413|ref|ZP_01749160.1| NADH-ubiquinone oxidoreductase 18 kDa subunit [Roseobacter sp. CCS2] gi|126716279|gb|EBA13143.1| NADH-ubiquinone oxidoreductase 18 kDa subunit [Roseobacter sp. CCS2] Length = 103 Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 31/80 (38%), Positives = 46/80 (57%), Gaps = 2/80 (2%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVI-PSCKESQ 59 +LE T ++PL+G+TSS DT QVKL F + EAA +YA ++ I V P +++ Sbjct: 24 VLEHVAETAREVDPLMGWTSSSDTQAQVKLEFDTKEAALEYARENSIDAVVREPKARKAN 83 Query: 60 -KELSYQRNFSYDRLEPWTH 78 + Y NF+ +R WTH Sbjct: 84 IRPGGYGENFATNRRGAWTH 103 >gi|254436509|ref|ZP_05050003.1| ETC complex I subunit conserved region superfamily [Octadecabacter antarcticus 307] gi|198251955|gb|EDY76269.1| ETC complex I subunit conserved region superfamily [Octadecabacter antarcticus 307] Length = 103 Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 2/80 (2%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVI-PSCKESQ 59 +LEF + + ++PL+G+TSS D QV++ F +++AA YA+ +GI P + + Sbjct: 24 VLEFAQTSAREVDPLMGWTSSSDMQTQVQMTFETMDAALDYAAANGIDASFQEPKKRRAN 83 Query: 60 KEL-SYQRNFSYDRLEPWTH 78 + Y NF+ +R WTH Sbjct: 84 IRVGGYGENFATNRRGAWTH 103 >gi|114770190|ref|ZP_01447728.1| NADH-ubiquinone oxidoreductase family protein [alpha proteobacterium HTCC2255] gi|114549027|gb|EAU51910.1| NADH-ubiquinone oxidoreductase family protein [alpha proteobacterium HTCC2255] Length = 103 Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 32/80 (40%), Positives = 42/80 (52%), Gaps = 2/80 (2%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVI--PSCKES 58 +LEF + I+PL+G+TSS D QVKL F S + A YA GI Y + K Sbjct: 24 VLEFSQSEVRNIDPLMGWTSSGDMDSQVKLSFESKDEAISYADQKGITYTLQEPKERKHV 83 Query: 59 QKELSYQRNFSYDRLEPWTH 78 + Y NF+ +R E WTH Sbjct: 84 IRNGGYGDNFATNRKETWTH 103 >gi|87199377|ref|YP_496634.1| ETC complex I subunit region [Novosphingobium aromaticivorans DSM 12444] gi|87135058|gb|ABD25800.1| ETC complex I subunit conserved region [Novosphingobium aromaticivorans DSM 12444] Length = 92 Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 30/68 (44%), Positives = 39/68 (57%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +LEFE +PL+G+ S DT QV L F +LE A+ YA+ HGI+ VIP+ K Sbjct: 24 LLEFEPAEARRPDPLMGWAGSGDTQSQVVLKFETLEEAQAYATRHGIEAHVIPTPPRKLK 83 Query: 61 ELSYQRNF 68 SY NF Sbjct: 84 LQSYADNF 91 >gi|329850704|ref|ZP_08265549.1| NADH dehydrogenase ubiquinone iron-sulfur protein 4 [Asticcacaulis biprosthecum C19] gi|328841019|gb|EGF90590.1| NADH dehydrogenase ubiquinone iron-sulfur protein 4 [Asticcacaulis biprosthecum C19] Length = 101 Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 29/78 (37%), Positives = 45/78 (57%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +LEFE + +PL+G++SS DT Q++L F + + A YA HGI + +I + Sbjct: 24 ILEFEPKSARTPDPLMGWSSSADTEAQIRLTFETKDQAMAYAEHHGIPFRLIEPELPPKI 83 Query: 61 ELSYQRNFSYDRLEPWTH 78 +Y NF+Y R + WTH Sbjct: 84 IKAYADNFAYTRRQSWTH 101 >gi|57239483|ref|YP_180619.1| putative NADH-ubiquinone oxidoreductase subunit [Ehrlichia ruminantium str. Welgevonden] gi|58579461|ref|YP_197673.1| putative NADH-ubiquinone oxidoreductase subunit [Ehrlichia ruminantium str. Welgevonden] gi|58617515|ref|YP_196714.1| putative NADH-ubiquinone oxidoreductase subunit [Ehrlichia ruminantium str. Gardel] gi|57161562|emb|CAH58489.1| putative NADH-ubiquinone oxidoreductase [Ehrlichia ruminantium str. Welgevonden] gi|58417127|emb|CAI28240.1| Putative NADH-ubiquinone oxidoreductase subunit [Ehrlichia ruminantium str. Gardel] gi|58418087|emb|CAI27291.1| Putative NADH-ubiquinone oxidoreductase subunit [Ehrlichia ruminantium str. Welgevonden] Length = 97 Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 30/71 (42%), Positives = 41/71 (57%) Query: 2 LEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKE 61 LEF YIEPL+ +T S DT+QQV LFF + E A YA+ H I++ V+ ++ Sbjct: 25 LEFGPSNTQYIEPLMQWTGSCDTMQQVSLFFATKEQAIAYANAHNIKHIVLQEYSQTIAP 84 Query: 62 LSYQRNFSYDR 72 SY NF+ R Sbjct: 85 KSYADNFTRLR 95 >gi|254476646|ref|ZP_05090032.1| ETC complex I subunit conserved region [Ruegeria sp. R11] gi|214030889|gb|EEB71724.1| ETC complex I subunit conserved region [Ruegeria sp. R11] Length = 65 Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 28/65 (43%), Positives = 39/65 (60%), Gaps = 2/65 (3%) Query: 16 LGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVI-PSCKESQ-KELSYQRNFSYDRL 73 +G+TSS DT QV+L F + EAA +YA HGI V P +++ + Y NF+ +R Sbjct: 1 MGWTSSSDTQSQVRLRFDTKEAALEYAEAHGIDAVVSEPKVRKANVRAGGYGENFATNRR 60 Query: 74 EPWTH 78 PWTH Sbjct: 61 GPWTH 65 >gi|88607239|ref|YP_504709.1| putative oxidoreductase [Anaplasma phagocytophilum HZ] gi|88598302|gb|ABD43772.1| putative oxidoreductase [Anaplasma phagocytophilum HZ] Length = 102 Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 29/71 (40%), Positives = 40/71 (56%) Query: 2 LEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKE 61 +EFE Y+E L+G+T S++TLQQV++ F S E A Y HGI Y ++ S+ Sbjct: 30 VEFEPSRSQYVEGLMGWTGSEETLQQVRMCFGSKEDAIAYVEAHGIPYILLQDATASRVP 89 Query: 62 LSYQRNFSYDR 72 SY NF R Sbjct: 90 KSYATNFLRKR 100 >gi|288958221|ref|YP_003448562.1| NADH dehydrogenase [ubiquinone] iron-sulfur protein 4 [Azospirillum sp. B510] gi|288910529|dbj|BAI72018.1| NADH dehydrogenase [ubiquinone] iron-sulfur protein 4 [Azospirillum sp. B510] Length = 98 Score = 55.5 bits (132), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 30/72 (41%), Positives = 40/72 (55%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 ML++E TP EPL+G+TSS DTL QV+L F + E A +A G Y V + + Sbjct: 24 MLDYEIETPRRPEPLMGWTSSGDTLNQVRLSFETKEEAIAFAEREGWTYSVQAAPVRRVR 83 Query: 61 ELSYQRNFSYDR 72 +Y NF DR Sbjct: 84 PRNYADNFRTDR 95 >gi|163735211|ref|ZP_02142646.1| NADH-ubiquinone oxidoreductase 18 kDa subunit [Roseobacter litoralis Och 149] gi|161391425|gb|EDQ15759.1| NADH-ubiquinone oxidoreductase 18 kDa subunit [Roseobacter litoralis Och 149] Length = 103 Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 30/80 (37%), Positives = 44/80 (55%), Gaps = 2/80 (2%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKE--S 58 +LEF + ++PL+G+TSS D QVKL F + EAA +YA ++GI + K + Sbjct: 24 ILEFAPGSSREVDPLMGWTSSSDMQSQVKLRFDTKEAAVEYARENGIDADIQEPKKRRPN 83 Query: 59 QKELSYQRNFSYDRLEPWTH 78 + Y NF+ R WTH Sbjct: 84 IRAGGYGENFATGRRGAWTH 103 >gi|294012757|ref|YP_003546217.1| putative oxidoreductase [Sphingobium japonicum UT26S] gi|292676087|dbj|BAI97605.1| putative oxidoreductase [Sphingobium japonicum UT26S] Length = 92 Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 28/68 (41%), Positives = 38/68 (55%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +LE+ +PL G+ S DT QQ++L F S EAA YA GI Y VIP+ ++ K Sbjct: 24 VLEYVAAEAKKPDPLTGWAGSGDTKQQIRLTFSSEEAARAYAEREGIAYAVIPTAPKTLK 83 Query: 61 ELSYQRNF 68 +Y NF Sbjct: 84 IQAYADNF 91 >gi|197105100|ref|YP_002130477.1| NADH-ubiquinone oxidoreductase-related protein [Phenylobacterium zucineum HLK1] gi|196478520|gb|ACG78048.1| NADH-ubiquinone oxidoreductase-related protein [Phenylobacterium zucineum HLK1] Length = 102 Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 29/79 (36%), Positives = 44/79 (55%), Gaps = 1/79 (1%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDT-LQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQ 59 +LEFE +PL+G+T + DT QV+L F + E A +YA HGI + ++ + Sbjct: 24 VLEFEPKAARRPDPLMGWTQTTDTESSQVRLHFETKEDAVRYAEQHGIAFQLVDPKPAKR 83 Query: 60 KELSYQRNFSYDRLEPWTH 78 +Y NF++ R PWTH Sbjct: 84 IIKAYADNFAFGRRIPWTH 102 >gi|114799345|ref|YP_761265.1| putative NADH-quinone oxidoreductase [Hyphomonas neptunium ATCC 15444] gi|114739519|gb|ABI77644.1| putative NADH-quinone oxidoreductase [Hyphomonas neptunium ATCC 15444] Length = 102 Score = 55.1 bits (131), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 27/66 (40%), Positives = 38/66 (57%) Query: 13 EPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKELSYQRNFSYDR 72 +PL+G+TS DT Q++L F + E A YA G+ + V + + SY NFS DR Sbjct: 37 DPLMGWTSIDDTSGQIRLQFDTREQAIAYAEREGLNFRVEEPRERKRLVKSYAENFSADR 96 Query: 73 LEPWTH 78 +PWTH Sbjct: 97 KQPWTH 102 >gi|254450951|ref|ZP_05064388.1| NADH-ubiquinone oxidoreductase 18 kda subunit [Octadecabacter antarcticus 238] gi|198265357|gb|EDY89627.1| NADH-ubiquinone oxidoreductase 18 kda subunit [Octadecabacter antarcticus 238] Length = 103 Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 29/80 (36%), Positives = 45/80 (56%), Gaps = 2/80 (2%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVI-PSCKESQ 59 +LEF + ++PL+G+TSS DT QVK+ F + +AA YA+ + I V P + + Sbjct: 24 VLEFAQAFAREVDPLMGWTSSSDTQTQVKMTFETKDAALDYAAANSIDASVQEPKKRRAN 83 Query: 60 KEL-SYQRNFSYDRLEPWTH 78 + Y NF+ +R WTH Sbjct: 84 IRVGGYGENFATNRRGAWTH 103 >gi|110678581|ref|YP_681588.1| NADH-ubiquinone oxidoreductase 18 kDa subunit [Roseobacter denitrificans OCh 114] gi|109454697|gb|ABG30902.1| NADH-ubiquinone oxidoreductase 18 kDa subunit [Roseobacter denitrificans OCh 114] Length = 103 Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 31/80 (38%), Positives = 44/80 (55%), Gaps = 2/80 (2%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKE--S 58 +LEF + ++PL+G+TSS D QV+L F S EAA +YA ++GI V K + Sbjct: 24 ILEFAPQSSREVDPLMGWTSSSDMQSQVRLRFDSKEAAVEYARENGIDADVQEPKKRRPN 83 Query: 59 QKELSYQRNFSYDRLEPWTH 78 + Y NF+ R WTH Sbjct: 84 IRPGGYGENFATGRRGAWTH 103 >gi|209964400|ref|YP_002297315.1| NADH-ubiquinone oxidoreductase subunit, putative [Rhodospirillum centenum SW] gi|209957866|gb|ACI98502.1| NADH-ubiquinone oxidoreductase subunit, putative [Rhodospirillum centenum SW] Length = 101 Score = 53.9 bits (128), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 32/72 (44%), Positives = 38/72 (52%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +LE+E TP EPL+G+ SS DTL QV+L F S EAA +A G V S Sbjct: 24 LLEYEIETPRRAEPLMGWISSGDTLNQVRLRFDSKEAAIAFAEKKGWACDVAESHTRRVT 83 Query: 61 ELSYQRNFSYDR 72 SY NF DR Sbjct: 84 PKSYADNFRSDR 95 >gi|254560114|ref|YP_003067209.1| hypothetical protein METDI1632 [Methylobacterium extorquens DM4] gi|254267392|emb|CAX23229.1| conserved hypothetical protein [Methylobacterium extorquens DM4] Length = 252 Score = 53.9 bits (128), Expect = 7e-06, Method: Composition-based stats. Identities = 27/58 (46%), Positives = 37/58 (63%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKES 58 +L FE+ TPP ++PL+G+T S D L QV L F SL+ A +YA GI Y V + E+ Sbjct: 51 VLRFERRTPPTVDPLMGWTESDDPLTQVVLKFDSLQEATRYADREGITYRVEEAAPEA 108 >gi|23013997|ref|ZP_00053839.1| hypothetical protein Magn03008447 [Magnetospirillum magnetotacticum MS-1] Length = 102 Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 27/74 (36%), Positives = 39/74 (52%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +LE+E P + L+G+ S DT QV++ F + E A +A G+ Y V QK Sbjct: 25 VLEYEPAAPKQPDNLMGWVGSTDTTSQVRVKFATKEEAVAFAKKKGLDYSVAAENPRLQK 84 Query: 61 ELSYQRNFSYDRLE 74 +Y NF YD+LE Sbjct: 85 PKNYADNFRYDKLE 98 >gi|167646970|ref|YP_001684633.1| ETC complex subunit I region [Caulobacter sp. K31] gi|167349400|gb|ABZ72135.1| ETC complex I subunit conserved region [Caulobacter sp. K31] Length = 101 Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 28/78 (35%), Positives = 41/78 (52%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +LEFE + +PL+G+T S D QV+L F + E A YA H I + + + Sbjct: 24 VLEFEPASARRSDPLMGWTQSSDMNGQVRLNFETREEAIAYAQRHEISFQLFEPKTPKRI 83 Query: 61 ELSYQRNFSYDRLEPWTH 78 +Y NF+ R +PWTH Sbjct: 84 IKAYADNFAAGRRQPWTH 101 >gi|148556352|ref|YP_001263934.1| ETC complex I subunit [Sphingomonas wittichii RW1] gi|148501542|gb|ABQ69796.1| ETC complex I subunit conserved region [Sphingomonas wittichii RW1] Length = 112 Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 27/68 (39%), Positives = 38/68 (55%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +LE+E +PL G+ S DT QV+L FPSLEAA+ YA G+ V+ + + K Sbjct: 38 VLEYEPTEAKRPDPLTGWAGSGDTRGQVRLSFPSLEAAKAYADREGLTAHVVAGPERTLK 97 Query: 61 ELSYQRNF 68 +Y NF Sbjct: 98 LQAYADNF 105 >gi|307294475|ref|ZP_07574317.1| ETC complex I subunit conserved region [Sphingobium chlorophenolicum L-1] gi|306878949|gb|EFN10167.1| ETC complex I subunit conserved region [Sphingobium chlorophenolicum L-1] Length = 92 Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 28/68 (41%), Positives = 37/68 (54%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +LE+ +PL G+ S D QQ+KL F S EAA YA GI Y VIP+ ++ K Sbjct: 24 VLEYAPAEAKKPDPLTGWAGSGDMKQQIKLSFSSEEAARAYAEREGIAYTVIPTAPKTLK 83 Query: 61 ELSYQRNF 68 +Y NF Sbjct: 84 IQAYADNF 91 >gi|328542276|ref|YP_004302385.1| ETC complex I subunit conserved region [Polymorphum gilvum SL003B-26A1] gi|326412025|gb|ADZ69088.1| ETC complex I subunit conserved region [Polymorphum gilvum SL003B-26A1] Length = 191 Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 24/51 (47%), Positives = 33/51 (64%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCV 51 +LEFE PP+IEPL+GYTSS D + ++L FP E+A +A +Y V Sbjct: 46 ILEFEPSRPPHIEPLMGYTSSDDPYRPIRLKFPDRESAVAFAERQDWRYIV 96 >gi|16125638|ref|NP_420202.1| NADH-ubiquinone oxidoreductase-like protein [Caulobacter crescentus CB15] gi|221234390|ref|YP_002516826.1| electron transport complex I subunit NADH-ubiquinone oxidoreductase [Caulobacter crescentus NA1000] gi|13422746|gb|AAK23370.1| NADH-ubiquinone oxidoreductase-related protein [Caulobacter crescentus CB15] gi|220963562|gb|ACL94918.1| electron transport complex I subunit, NADH-ubiquinone oxidoreductase [Caulobacter crescentus NA1000] Length = 101 Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 26/78 (33%), Positives = 43/78 (55%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +LEFE + +PL+G+T+S D Q++L F + + A YA H I + + + Sbjct: 24 VLEFEPASARKPDPLMGWTTSSDMNGQIRLTFETRDEAVAYAQRHEIAFQLFEPKAPKRI 83 Query: 61 ELSYQRNFSYDRLEPWTH 78 +Y NF+ +R +PWTH Sbjct: 84 LKAYADNFAANRKQPWTH 101 >gi|197103232|ref|YP_002128610.1| hypothetical protein PHZ_p0092 [Phenylobacterium zucineum HLK1] gi|196480508|gb|ACG80035.1| hypothetical protein PHZ_p0092 [Phenylobacterium zucineum HLK1] Length = 228 Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 24/50 (48%), Positives = 33/50 (66%) Query: 2 LEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCV 51 + F+ + P IEPL+G+T S DTLQQV+L FP+ EAA Y G+ + V Sbjct: 53 VTFKPRSAPRIEPLMGWTESADTLQQVRLSFPTAEAAIGYCQRQGLAFEV 102 >gi|23006540|ref|ZP_00048813.1| hypothetical protein Magn03002027 [Magnetospirillum magnetotacticum MS-1] Length = 64 Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 27/64 (42%), Positives = 37/64 (57%), Gaps = 1/64 (1%) Query: 16 LGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKE-SQKELSYQRNFSYDRLE 74 + +T S D LQQV+L F + + A YA GI Y V + ++K LSY NF ++R Sbjct: 1 MAWTGSSDMLQQVRLEFDTADEAVAYAKSAGIAYRVEETPPPIARKGLSYSDNFKFNRTA 60 Query: 75 PWTH 78 PWTH Sbjct: 61 PWTH 64 >gi|295689098|ref|YP_003592791.1| ETC complex I subunit [Caulobacter segnis ATCC 21756] gi|295431001|gb|ADG10173.1| ETC complex I subunit conserved region [Caulobacter segnis ATCC 21756] Length = 101 Score = 51.6 bits (122), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 26/78 (33%), Positives = 42/78 (53%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +LEFE + +PL+G+T S D Q++L F + + A YA H I + + + Sbjct: 24 VLEFEPASARKPDPLMGWTQSSDMNGQIRLTFDTRDEAVAYAQRHEIAFQLFEPKTPKRI 83 Query: 61 ELSYQRNFSYDRLEPWTH 78 +Y NF+ +R +PWTH Sbjct: 84 IKAYADNFAANRKQPWTH 101 >gi|153011786|ref|YP_001372999.1| ETC complex I subunit region [Ochrobactrum anthropi ATCC 49188] gi|151563674|gb|ABS17170.1| ETC complex I subunit conserved region [Ochrobactrum anthropi ATCC 49188] Length = 170 Score = 51.2 bits (121), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 23/51 (45%), Positives = 32/51 (62%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCV 51 +LEFE PP+IEPL+GYTSS D + ++L FP ++A +A Y V Sbjct: 29 ILEFEPSRPPHIEPLMGYTSSGDPYRPIRLKFPDRDSAVDFAERQDWHYVV 79 >gi|218462437|ref|ZP_03502528.1| ETC complex I subunit region [Rhizobium etli Kim 5] Length = 252 Score = 50.8 bits (120), Expect = 5e-05, Method: Composition-based stats. Identities = 25/50 (50%), Positives = 33/50 (66%) Query: 2 LEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCV 51 L FE +IEPL+GYT DTL QV+L FP+L++A +YA G+ Y V Sbjct: 65 LVFEHRKAQFIEPLMGYTGCTDTLPQVELEFPTLQSAIRYAERQGLTYIV 114 >gi|296535582|ref|ZP_06897763.1| NADH-ubiquinone oxidoreductase [Roseomonas cervicalis ATCC 49957] gi|296264098|gb|EFH10542.1| NADH-ubiquinone oxidoreductase [Roseomonas cervicalis ATCC 49957] Length = 158 Score = 50.8 bits (120), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 27/82 (32%), Positives = 39/82 (47%), Gaps = 6/82 (7%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +LEF PP +PL G+ S D L Q++L FP E+A +A HG + V+ + Sbjct: 40 LLEFPPSAPPLRDPLTGWIGSADPLAQLRLRFPDRESAVAFAERHGWPHEVVEPAPRGLR 99 Query: 61 ELSYQRNFSYD------RLEPW 76 SY D R++PW Sbjct: 100 YRSYAEQLRCDLSGAIARVQPW 121 >gi|144899130|emb|CAM75994.1| NADH-ubiquinone oxidoreductase family protein [Magnetospirillum gryphiswaldense MSR-1] Length = 102 Score = 50.8 bits (120), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 27/75 (36%), Positives = 41/75 (54%), Gaps = 1/75 (1%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIP-SCKESQ 59 +LE+E +PL+G+ S DT QQV++ F S E A YA G+ + V + K+ Sbjct: 24 VLEYEPAARKDADPLMGWLGSDDTTQQVRIKFASKEEAVAYAKRKGLDFQVFAEAAKKPV 83 Query: 60 KELSYQRNFSYDRLE 74 +Y NF +D+LE Sbjct: 84 GAKNYSDNFRFDKLE 98 >gi|149186798|ref|ZP_01865108.1| NADH-ubiquinone oxidoreductase-related protein [Erythrobacter sp. SD-21] gi|148829465|gb|EDL47906.1| NADH-ubiquinone oxidoreductase-related protein [Erythrobacter sp. SD-21] Length = 92 Score = 50.4 bits (119), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 28/68 (41%), Positives = 39/68 (57%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +LEFE+ +PL+G+T S DT QV+L FPS + A+ YA +GI V + S K Sbjct: 24 VLEFEQSEARQADPLMGWTGSGDTQAQVQLNFPSKDEAKAYAEKYGIAARVHATPPHSLK 83 Query: 61 ELSYQRNF 68 +Y NF Sbjct: 84 LQAYADNF 91 >gi|170750508|ref|YP_001756768.1| ETC complex I subunit region [Methylobacterium radiotolerans JCM 2831] gi|170657030|gb|ACB26085.1| ETC complex I subunit conserved region [Methylobacterium radiotolerans JCM 2831] Length = 225 Score = 50.4 bits (119), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 24/61 (39%), Positives = 36/61 (59%), Gaps = 1/61 (1%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTL-QQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQ 59 +L FE+ TPP EPL+G+T +DTL +V L FP+ A YA G+ Y + P + + Sbjct: 48 LLTFERETPPEREPLMGWTGGRDTLAAEVVLTFPTRARAVAYAERQGLAYRIEPDPPDGR 107 Query: 60 K 60 + Sbjct: 108 R 108 >gi|85708098|ref|ZP_01039164.1| NADH-ubiquinone oxidoreductase-related protein [Erythrobacter sp. NAP1] gi|85689632|gb|EAQ29635.1| NADH-ubiquinone oxidoreductase-related protein [Erythrobacter sp. NAP1] Length = 92 Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 28/68 (41%), Positives = 41/68 (60%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +LE+E+ +PL+G+T S DT QVKL FP+ +AA+ YA +GI V + +S K Sbjct: 24 VLEYEQSEARKPDPLMGWTGSGDTQAQVKLKFPTKDAAKAYAEKYGITARVHKTPPKSLK 83 Query: 61 ELSYQRNF 68 +Y NF Sbjct: 84 IQAYADNF 91 >gi|332188681|ref|ZP_08390396.1| ETC complex I subunit conserved region family protein [Sphingomonas sp. S17] gi|332011298|gb|EGI53388.1| ETC complex I subunit conserved region family protein [Sphingomonas sp. S17] Length = 93 Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 26/67 (38%), Positives = 38/67 (56%) Query: 2 LEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKE 61 LEFE +PL G+ S DT +QV+L F +LE A Y G+ + V+P+ +++ K Sbjct: 26 LEFEPTEAKQPDPLTGWAGSGDTREQVRLTFATLEEAIAYCQREGLDHHVVPTPQKTLKL 85 Query: 62 LSYQRNF 68 SY NF Sbjct: 86 QSYADNF 92 >gi|85373562|ref|YP_457624.1| NADH-ubiquinone oxidoreductase-related protein [Erythrobacter litoralis HTCC2594] gi|84786645|gb|ABC62827.1| NADH-ubiquinone oxidoreductase-related protein [Erythrobacter litoralis HTCC2594] Length = 92 Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 28/68 (41%), Positives = 39/68 (57%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +LEFE+ +PL+G+T S DT QV L FPS +AA+ YA +GI V + + K Sbjct: 24 VLEFEQSEARRPDPLMGWTGSGDTQAQVSLTFPSKDAAKAYAQKYGIPARVHATPPKGLK 83 Query: 61 ELSYQRNF 68 +Y NF Sbjct: 84 LQAYADNF 91 >gi|114327590|ref|YP_744747.1| NADH-ubiquinone oxidoreductase 18 kDa subunit-like protein [Granulibacter bethesdensis CGDNIH1] gi|114315764|gb|ABI61824.1| NADH-ubiquinone oxidoreductase 18 kDa subunit-like protein [Granulibacter bethesdensis CGDNIH1] Length = 101 Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 3/74 (4%) Query: 5 EKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKELSY 64 +K TP + L+G+ +T QV+L FP+ +AA YA +GI Y + + + Y Sbjct: 31 QKRTP---DALMGWIGGAETQTQVRLRFPTRDAAIAYADANGIDYEIETAHGRKVRPKQY 87 Query: 65 QRNFSYDRLEPWTH 78 NF + R+ WTH Sbjct: 88 SDNFRFGRIYNWTH 101 >gi|240142559|ref|YP_002967072.1| hypothetical protein MexAM1_META2p0916 [Methylobacterium extorquens AM1] gi|240012506|gb|ACS43731.1| conserved hypothetical protein [Methylobacterium extorquens AM1] Length = 187 Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 23/51 (45%), Positives = 31/51 (60%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCV 51 +LEFE PP IEPL+GYTSS D + ++L FP ++A +A Y V Sbjct: 46 VLEFEPSRPPQIEPLMGYTSSGDPYRPIRLKFPDRDSAVDFAERQDWHYVV 96 >gi|220922191|ref|YP_002497493.1| ETC complex subunit I [Methylobacterium nodulans ORS 2060] gi|219946798|gb|ACL57190.1| ETC complex I subunit conserved region [Methylobacterium nodulans ORS 2060] Length = 248 Score = 49.3 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 27/58 (46%), Positives = 35/58 (60%), Gaps = 5/58 (8%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTL-QQVKLFFPSLEAAEKYASDHGIQY----CVIP 53 +L FE+ T P IEPL+G+T+ DTL QV+L F S E A YA G+ Y C +P Sbjct: 54 VLRFERHTAPEIEPLMGWTAGDDTLATQVELRFASREDAVAYAERQGLCYRLDGCAVP 111 >gi|68171463|ref|ZP_00544850.1| ETC complex I subunit conserved region [Ehrlichia chaffeensis str. Sapulpa] gi|88657857|ref|YP_507036.1| putative oxidoreductase [Ehrlichia chaffeensis str. Arkansas] gi|67999124|gb|EAM85787.1| ETC complex I subunit conserved region [Ehrlichia chaffeensis str. Sapulpa] gi|88599314|gb|ABD44783.1| putative oxidoreductase [Ehrlichia chaffeensis str. Arkansas] Length = 104 Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 30/71 (42%), Positives = 36/71 (50%) Query: 2 LEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKE 61 LEFE Y EPL+ +T S DT QQV L F + E A YA H I Y V+ + Sbjct: 32 LEFEPSCTQYTEPLMNWTGSHDTKQQVCLSFTTRELAIAYAVAHKIDYTVLQDNPRTIVP 91 Query: 62 LSYQRNFSYDR 72 SY NF+ R Sbjct: 92 KSYADNFTKPR 102 >gi|94497267|ref|ZP_01303839.1| NADH-ubiquinone oxidoreductase-related protein [Sphingomonas sp. SKA58] gi|94423372|gb|EAT08401.1| NADH-ubiquinone oxidoreductase-related protein [Sphingomonas sp. SKA58] Length = 117 Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 26/68 (38%), Positives = 38/68 (55%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +LEF + +PL G+ S DT QVKL F + +AA YA +GI Y +I + ++ K Sbjct: 49 VLEFAQAEAKMPDPLTGWAGSGDTQSQVKLTFATQDAAIAYADKYGIAYTLIATPPKTLK 108 Query: 61 ELSYQRNF 68 +Y NF Sbjct: 109 IQAYADNF 116 >gi|227818757|ref|YP_002822728.1| NADH-ubiquinone oxidoreductase [Sinorhizobium fredii NGR234] gi|227337756|gb|ACP21975.1| putative NADH-ubiquinone oxidoreductase [Sinorhizobium fredii NGR234] Length = 74 Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 22/42 (52%), Positives = 28/42 (66%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYA 42 +L FE+ PP I+ L+GYT DTL QV+L FPS + A YA Sbjct: 25 LLVFERRVPPTIDHLIGYTGGSDTLTQVELRFPSRDTAVAYA 66 >gi|296284713|ref|ZP_06862711.1| NADH-ubiquinone oxidoreductase-related protein [Citromicrobium bathyomarinum JL354] Length = 80 Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 28/68 (41%), Positives = 39/68 (57%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +LEFE+ +PL+G+T S DT QV L FPS + A+ YA +GI V + ++ K Sbjct: 12 VLEFEQSEARRPDPLMGWTGSGDTQAQVILTFPSKDEAKAYAEKYGIAARVHATPPKTLK 71 Query: 61 ELSYQRNF 68 SY NF Sbjct: 72 LQSYADNF 79 >gi|103486010|ref|YP_615571.1| ETC complex I subunit region [Sphingopyxis alaskensis RB2256] gi|98976087|gb|ABF52238.1| ETC complex I subunit conserved region [Sphingopyxis alaskensis RB2256] Length = 92 Score = 47.0 bits (110), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 26/68 (38%), Positives = 36/68 (52%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 MLEF +PL+G+ S DT +Q++L F S E A YA +GI V+P+ K Sbjct: 24 MLEFAPAEARKPDPLMGWAGSGDTQRQLRLSFASREEAVAYAEKYGIDAEVMPTPVRKLK 83 Query: 61 ELSYQRNF 68 +Y NF Sbjct: 84 IQAYADNF 91 >gi|197103178|ref|YP_002128556.1| hypothetical protein PHZ_p0038 [Phenylobacterium zucineum HLK1] gi|196480454|gb|ACG79981.1| conserved hypothetical protein [Phenylobacterium zucineum HLK1] Length = 281 Score = 46.2 bits (108), Expect = 0.001, Method: Composition-based stats. Identities = 23/50 (46%), Positives = 31/50 (62%) Query: 2 LEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCV 51 L F + P +EPL+G+ S D LQQV L FP+ EAA Y HG+++ V Sbjct: 95 LRFAARSAPRVEPLMGWLESTDPLQQVNLRFPTAEAAIGYCRRHGLEFEV 144 >gi|242015736|ref|XP_002428503.1| NADH-ubiquinone oxidoreductase 18 kDa subunit, putative [Pediculus humanus corporis] gi|212513137|gb|EEB15765.1| NADH-ubiquinone oxidoreductase 18 kDa subunit, putative [Pediculus humanus corporis] Length = 156 Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust. Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 1/71 (1%) Query: 2 LEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKE 61 LEFE P + PL+G++S+ D L +KL FP E+A +YA + ++ + K K Sbjct: 80 LEFE-TRPRWENPLMGWSSTGDPLSNMKLSFPDKESAIRYAEKNKYKWYLDSEKKTKPKV 138 Query: 62 LSYQRNFSYDR 72 SY NFS+++ Sbjct: 139 KSYGFNFSWNK 149 >gi|83592981|ref|YP_426733.1| ETC complex I subunit region [Rhodospirillum rubrum ATCC 11170] gi|83575895|gb|ABC22446.1| ETC complex I subunit conserved region [Rhodospirillum rubrum ATCC 11170] Length = 99 Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust. Identities = 24/73 (32%), Positives = 36/73 (49%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +LEFE + L+G+ S D Q++LFF + + AE YA G Y + K Sbjct: 26 VLEFEPTEKKVHDDLMGWVGSGDMNGQLRLFFATRKDAESYAKRKGFTYTAQDANPRVIK 85 Query: 61 ELSYQRNFSYDRL 73 SY NF+Y ++ Sbjct: 86 PKSYSDNFAYHKI 98 >gi|291233485|ref|XP_002736684.1| PREDICTED: NADH dehydrogenase (ubiquinone) Fe-S protein 4-like [Saccoglossus kowalevskii] Length = 170 Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust. Identities = 24/60 (40%), Positives = 36/60 (60%) Query: 13 EPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKELSYQRNFSYDR 72 PL+G++SS D L + + F S EAA K+A +G +Y V + + K SY NFS+D+ Sbjct: 104 NPLIGWSSSADPLSNLSVPFKSKEAAIKFAEKNGWRYEVEEKHERTPKVKSYGANFSWDK 163 >gi|326385520|ref|ZP_08207159.1| ETC complex I subunit region [Novosphingobium nitrogenifigens DSM 19370] gi|326210059|gb|EGD60837.1| ETC complex I subunit region [Novosphingobium nitrogenifigens DSM 19370] Length = 94 Score = 44.7 bits (104), Expect = 0.005, Method: Compositional matrix adjust. Identities = 26/68 (38%), Positives = 33/68 (48%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +LEF +PL G+ S DT QQV L F S A YA +GI+ + P+ K Sbjct: 26 LLEFAPAEAKKPDPLTGWAGSGDTQQQVVLRFGSEAEARAYADRYGIEVHITPTPPRRLK 85 Query: 61 ELSYQRNF 68 SY NF Sbjct: 86 LQSYADNF 93 >gi|320162901|gb|EFW39800.1| NADH-ubiquinone oxidoreductase IP subunit [Capsaspora owczarzaki ATCC 30864] Length = 191 Score = 44.7 bits (104), Expect = 0.005, Method: Compositional matrix adjust. Identities = 26/71 (36%), Positives = 39/71 (54%), Gaps = 1/71 (1%) Query: 2 LEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKE 61 L+FE + + PL+G+ SS D LQ + L F +LEAA +A +G Y V ++ Sbjct: 115 LDFE-VPERWENPLMGWASSGDPLQALDLEFDTLEAAIAFAEKNGWGYSVDEKIPPVRRI 173 Query: 62 LSYQRNFSYDR 72 SY NFS+ + Sbjct: 174 KSYGANFSWSK 184 >gi|190571324|ref|YP_001975682.1| oxidoreductase, putative [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|213018720|ref|ZP_03334528.1| oxidoreductase, putative [Wolbachia endosymbiont of Culex quinquefasciatus JHB] gi|190357596|emb|CAQ55037.1| oxidoreductase, putative [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|212995671|gb|EEB56311.1| oxidoreductase, putative [Wolbachia endosymbiont of Culex quinquefasciatus JHB] Length = 99 Score = 44.7 bits (104), Expect = 0.005, Method: Compositional matrix adjust. Identities = 24/58 (41%), Positives = 31/58 (53%) Query: 11 YIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKELSYQRNF 68 YIEPL+G+ SKD +Q+ L F SLE A YA H +Y + + SY NF Sbjct: 39 YIEPLMGWVGSKDPQKQIVLKFDSLEKAISYAKKHNTKYTIEMPKDVKRLPKSYANNF 96 >gi|294648532|ref|ZP_06726004.1| conserved hypothetical protein [Acinetobacter haemolyticus ATCC 19194] gi|292825573|gb|EFF84304.1| conserved hypothetical protein [Acinetobacter haemolyticus ATCC 19194] Length = 192 Score = 43.9 bits (102), Expect = 0.007, Method: Compositional matrix adjust. Identities = 19/51 (37%), Positives = 33/51 (64%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCV 51 +LEFE P +EPL+G+T+S+D + +++ FP ++A YA + +Y V Sbjct: 47 VLEFEPSRPQNLEPLMGWTTSQDPYRPIRMTFPDRDSAVDYALKNDWRYIV 97 >gi|225717194|gb|ACO14443.1| NADH dehydrogenase iron-sulfur protein 4, mitochondrial precursor [Esox lucius] Length = 170 Score = 43.5 bits (101), Expect = 0.010, Method: Compositional matrix adjust. Identities = 20/60 (33%), Positives = 32/60 (53%) Query: 13 EPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKELSYQRNFSYDR 72 PL+G+ S+ D + V L F S E A +A +G Y + ++ + SY NFS+D+ Sbjct: 104 NPLMGWASTADPMSNVNLTFSSKEDAIDFAEKNGWSYDITEKMEKKPRAKSYGANFSWDK 163 >gi|254455881|ref|ZP_05069310.1| ETC complex I subunit conserved region [Candidatus Pelagibacter sp. HTCC7211] gi|207082883|gb|EDZ60309.1| ETC complex I subunit conserved region [Candidatus Pelagibacter sp. HTCC7211] Length = 93 Score = 43.5 bits (101), Expect = 0.011, Method: Compositional matrix adjust. Identities = 27/68 (39%), Positives = 36/68 (52%), Gaps = 1/68 (1%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +LEF + P PL+G+ SS DTL ++KL F S E A YA I + +I K Sbjct: 25 ILEF-RTKDPTKNPLMGWESSSDTLTELKLEFSSKELAINYAKKKKIDFELIEPKKRKTV 83 Query: 61 ELSYQRNF 68 + SY NF Sbjct: 84 KKSYADNF 91 >gi|323449573|gb|EGB05460.1| hypothetical protein AURANDRAFT_16160 [Aureococcus anophagefferens] Length = 100 Score = 42.7 bits (99), Expect = 0.015, Method: Compositional matrix adjust. Identities = 19/55 (34%), Positives = 32/55 (58%), Gaps = 1/55 (1%) Query: 6 KITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQY-CVIPSCKESQ 59 K + PL+G+TS+ D L +L F + EAAE++A+ HG Y +P ++ + Sbjct: 42 KTEARWSNPLMGWTSTADPLGNAELKFETAEAAERFAAKHGWAYETSVPIARDKR 96 >gi|307108859|gb|EFN57098.1| hypothetical protein CHLNCDRAFT_143905 [Chlorella variabilis] Length = 159 Score = 42.7 bits (99), Expect = 0.015, Method: Compositional matrix adjust. Identities = 24/68 (35%), Positives = 38/68 (55%), Gaps = 6/68 (8%) Query: 11 YIEPLLGYTSSKDTLQQV--KLFFPSLEAAEKYASDHGIQYCV----IPSCKESQKELSY 64 ++ PL+G+TS+ D L+ V +L+FPS + A YA +G Y V P+ ++ + Y Sbjct: 75 WVNPLIGWTSTADPLENVGRQLYFPSKDDAIAYAEKNGWSYEVQEYHNPNKARPKRYIGY 134 Query: 65 QRNFSYDR 72 NFS R Sbjct: 135 GDNFSVKR 142 >gi|42520073|ref|NP_965988.1| oxidoreductase, putative [Wolbachia endosymbiont of Drosophila melanogaster] gi|42409810|gb|AAS13922.1| oxidoreductase, putative [Wolbachia endosymbiont of Drosophila melanogaster] Length = 99 Score = 42.7 bits (99), Expect = 0.017, Method: Compositional matrix adjust. Identities = 23/58 (39%), Positives = 31/58 (53%) Query: 11 YIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKELSYQRNF 68 YIEPL+G+ SKD +Q+ L F SLE A YA ++Y + + SY NF Sbjct: 39 YIEPLMGWVGSKDPKKQIVLKFDSLEKAVFYAKKRNVKYIIEMPKNVKRLPKSYASNF 96 >gi|254560122|ref|YP_003067217.1| hypothetical protein METDI1640 [Methylobacterium extorquens DM4] gi|254267400|emb|CAX23237.1| conserved hypothetical protein [Methylobacterium extorquens DM4] Length = 250 Score = 42.7 bits (99), Expect = 0.017, Method: Composition-based stats. Identities = 28/74 (37%), Positives = 39/74 (52%), Gaps = 6/74 (8%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTL-QQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQ 59 +L FE+ TPP I+ L+G+T DTL +V+L F S A YA G+ Y V E++ Sbjct: 49 ILSFERRTPPEIDDLMGWTGGDDTLATEVRLTFASRAEAIAYAERQGLDYDV-----EAE 103 Query: 60 KELSYQRNFSYDRL 73 E Q +F R Sbjct: 104 PERVPQASFVTPRF 117 >gi|58698056|ref|ZP_00372980.1| oxidoreductase, putative [Wolbachia endosymbiont of Drosophila ananassae] gi|225629938|ref|YP_002726729.1| oxidoreductase, putative [Wolbachia sp. wRi] gi|58535413|gb|EAL59488.1| oxidoreductase, putative [Wolbachia endosymbiont of Drosophila ananassae] gi|225591919|gb|ACN94938.1| oxidoreductase, putative [Wolbachia sp. wRi] Length = 99 Score = 42.7 bits (99), Expect = 0.017, Method: Compositional matrix adjust. Identities = 23/58 (39%), Positives = 31/58 (53%) Query: 11 YIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKELSYQRNF 68 YIEPL+G+ SKD +Q+ L F SLE A YA ++Y + + SY NF Sbjct: 39 YIEPLMGWVGSKDPKKQIVLKFDSLEKAVFYAKKRNVKYIIEMPKNVKRLPKSYASNF 96 >gi|58584802|ref|YP_198375.1| NADH:ubiquinone oxidoreductase 18 kDa subunit [Wolbachia endosymbiont strain TRS of Brugia malayi] gi|58419118|gb|AAW71133.1| NADH:ubiquinone oxidoreductase 18 kDa subunit [Wolbachia endosymbiont strain TRS of Brugia malayi] Length = 99 Score = 42.7 bits (99), Expect = 0.017, Method: Compositional matrix adjust. Identities = 23/59 (38%), Positives = 33/59 (55%) Query: 11 YIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKELSYQRNFS 69 YIEPL+G+ SK+ +Q+ L F LE A YA GI+Y + ++ SY NF+ Sbjct: 39 YIEPLMGWVGSKNPKKQIVLKFDYLEKAVLYAEKCGIKYIIEMPKDVKRRPKSYASNFT 97 >gi|188582920|ref|YP_001926365.1| ETC complex I subunit conserved region [Methylobacterium populi BJ001] gi|179346418|gb|ACB81830.1| ETC complex I subunit conserved region [Methylobacterium populi BJ001] Length = 250 Score = 42.4 bits (98), Expect = 0.022, Method: Composition-based stats. Identities = 23/52 (44%), Positives = 31/52 (59%), Gaps = 1/52 (1%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTL-QQVKLFFPSLEAAEKYASDHGIQYCV 51 +L FE+ TPP I+ L+G+T DTL +V+L F S A YA G+ Y V Sbjct: 49 ILSFERRTPPEIDELMGWTGGDDTLATEVRLTFASRAEAVAYAERQGLDYDV 100 >gi|288856254|ref|NP_001165782.1| NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial [Nasonia vitripennis] Length = 194 Score = 42.0 bits (97), Expect = 0.030, Method: Compositional matrix adjust. Identities = 22/60 (36%), Positives = 32/60 (53%) Query: 13 EPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKELSYQRNFSYDR 72 PL+G+ SS D LQ ++ F + E A ++ G +Y V K K SY NFS+D+ Sbjct: 128 NPLMGWCSSGDPLQATRVNFQTAEQAIEHCKHMGWKYVVQKENKSDPKPRSYGTNFSWDK 187 >gi|302762961|ref|XP_002964902.1| hypothetical protein SELMODRAFT_143005 [Selaginella moellendorffii] gi|300167135|gb|EFJ33740.1| hypothetical protein SELMODRAFT_143005 [Selaginella moellendorffii] Length = 106 Score = 41.6 bits (96), Expect = 0.037, Method: Compositional matrix adjust. Identities = 24/66 (36%), Positives = 38/66 (57%), Gaps = 3/66 (4%) Query: 8 TPPYIEPLLGYTSSKDTLQQV---KLFFPSLEAAEKYASDHGIQYCVIPSCKESQKELSY 64 T Y +PL+G+TS+ D L V L F S E+A ++A+ HG +Y V +++ K +Y Sbjct: 32 TEKYQDPLMGWTSTSDPLAYVGDAALSFDSKESAIEFAAKHGWEYTVREPHQQTLKPKAY 91 Query: 65 QRNFSY 70 NF + Sbjct: 92 ADNFKW 97 >gi|225677073|ref|ZP_03788078.1| oxidoreductase, putative [Wolbachia endosymbiont of Muscidifurax uniraptor] gi|225590895|gb|EEH12117.1| oxidoreductase, putative [Wolbachia endosymbiont of Muscidifurax uniraptor] Length = 99 Score = 40.8 bits (94), Expect = 0.059, Method: Compositional matrix adjust. Identities = 23/58 (39%), Positives = 31/58 (53%) Query: 11 YIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKELSYQRNF 68 YIEPL+G+ SKD +Q+ L F SLE A YA ++Y + + SY NF Sbjct: 39 YIEPLMGWVGSKDPKKQIVLKFDSLEKAVFYAKKCNVKYIIEMPKNVKRLPKSYASNF 96 >gi|302809583|ref|XP_002986484.1| hypothetical protein SELMODRAFT_18036 [Selaginella moellendorffii] gi|300145667|gb|EFJ12341.1| hypothetical protein SELMODRAFT_18036 [Selaginella moellendorffii] Length = 118 Score = 40.4 bits (93), Expect = 0.083, Method: Compositional matrix adjust. Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 3/66 (4%) Query: 8 TPPYIEPLLGYTSSKDTLQQV---KLFFPSLEAAEKYASDHGIQYCVIPSCKESQKELSY 64 T Y +PL+G+TS+ D L V L F S E+A ++A+ HG +Y V S + +Y Sbjct: 45 TEKYQDPLMGWTSTSDPLAYVGDAALSFDSKESAIEFAAKHGWEYTVSVSITSLLRPKAY 104 Query: 65 QRNFSY 70 NF + Sbjct: 105 ADNFKW 110 >gi|302854027|ref|XP_002958525.1| NADH:ubiquinone oxidoreductase 18 kDa subunit [Volvox carteri f. nagariensis] gi|300256172|gb|EFJ40445.1| NADH:ubiquinone oxidoreductase 18 kDa subunit [Volvox carteri f. nagariensis] Length = 183 Score = 40.4 bits (93), Expect = 0.085, Method: Compositional matrix adjust. Identities = 24/78 (30%), Positives = 42/78 (53%), Gaps = 8/78 (10%) Query: 2 LEFEKITPPYIEPLLGYTSSKDTLQQVK---LFFPSLEAAEKYASDHGIQYCV-IPSCKE 57 +EFE ++ + PL+G+TS+ D L+ V L F + E A+++ HG Y V +P+ + Sbjct: 94 IEFETLSK-WTNPLMGWTSTADPLENVGRATLAFHTKEEAQRFCEKHGWSYTVDVPNIRR 152 Query: 58 SQKE---LSYQRNFSYDR 72 + ++ Y NF R Sbjct: 153 TVRQKRYAGYGDNFGIKR 170 >gi|149408414|ref|XP_001507034.1| PREDICTED: similar to NADH:ubiquinone oxidoreductase 18 kDa IP subunit [Ornithorhynchus anatinus] Length = 372 Score = 40.4 bits (93), Expect = 0.088, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 31/59 (52%) Query: 14 PLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKELSYQRNFSYDR 72 PL+G+ S+ D L + LFF + E A +A +G Y V K SY NFS+++ Sbjct: 307 PLMGWASTADPLSNMTLFFKTKEEAVAFAEKNGWSYDVQERRIPKPKSKSYGANFSWNK 365 >gi|156354146|ref|XP_001623262.1| predicted protein [Nematostella vectensis] gi|156209943|gb|EDO31162.1| predicted protein [Nematostella vectensis] Length = 168 Score = 40.0 bits (92), Expect = 0.12, Method: Compositional matrix adjust. Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 1/71 (1%) Query: 2 LEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKE 61 LEF+ + + PL+G+ S+ D L L F S E A YA G Y V + ++ + Sbjct: 92 LEFDTM-ERWENPLMGWASTGDPLSNTSLEFGSKEEAIIYAEKQGFNYEVDEAHEKIIRH 150 Query: 62 LSYQRNFSYDR 72 SY NFS+++ Sbjct: 151 KSYGANFSWNK 161 >gi|302688529|ref|XP_003033944.1| hypothetical protein SCHCODRAFT_53560 [Schizophyllum commune H4-8] gi|300107639|gb|EFI99041.1| hypothetical protein SCHCODRAFT_53560 [Schizophyllum commune H4-8] Length = 121 Score = 39.7 bits (91), Expect = 0.12, Method: Compositional matrix adjust. Identities = 21/58 (36%), Positives = 29/58 (50%) Query: 13 EPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKELSYQRNFSY 70 PL+GY SS D +Q V++ F + E A +A G Y V P + +Y NF Y Sbjct: 53 NPLMGYASSADYVQGVRMSFRTKEDAVHFAEKQGWDYYVYPPMVKRIPPKNYAENFLY 110 >gi|149059373|gb|EDM10380.1| NADH dehydrogenase (ubiquinone) Fe-S protein 4, 18kDa (NADH-coenzyme Q reductase), isoform CRA_b [Rattus norvegicus] Length = 89 Score = 39.7 bits (91), Expect = 0.12, Method: Compositional matrix adjust. Identities = 21/62 (33%), Positives = 31/62 (50%) Query: 11 YIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKELSYQRNFSY 70 + PL+G+ S+ D L + L F + E A +A HG Y V K SY NFS+ Sbjct: 21 WENPLMGWASTADPLSNMVLTFSAKEDAVAFAEKHGWSYDVEGRKVPKPKSKSYGANFSW 80 Query: 71 DR 72 ++ Sbjct: 81 NK 82 >gi|166240558|ref|XP_001732977.1| ETC complex I subunit conserved family protein [Dictyostelium discoideum AX4] gi|74866244|sp|Q8T1V6|NDUS4_DICDI RecName: Full=NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial; Flags: Precursor gi|165988658|gb|EDR41095.1| ETC complex I subunit conserved family protein [Dictyostelium discoideum AX4] Length = 190 Score = 39.7 bits (91), Expect = 0.14, Method: Compositional matrix adjust. Identities = 20/63 (31%), Positives = 32/63 (50%) Query: 8 TPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKELSYQRN 67 P + + L+G+ +SKDTL Q+ L F S A Y + G+ Y ++ +K+ Y Sbjct: 113 NPKWNDRLMGWWASKDTLNQLNLRFNSETDAVAYCKEIGLNYNIVEEDVTLRKKKKYGHR 172 Query: 68 FSY 70 F Y Sbjct: 173 FRY 175 >gi|91763262|ref|ZP_01265226.1| ETC complex I subunit conserved region protein [Candidatus Pelagibacter ubique HTCC1002] gi|91717675|gb|EAS84326.1| ETC complex I subunit conserved region protein [Candidatus Pelagibacter ubique HTCC1002] Length = 93 Score = 39.3 bits (90), Expect = 0.17, Method: Compositional matrix adjust. Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 1/68 (1%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 ++EFE I PL+G+ ++ +TL ++ L F S E A +YA + I + +I K Sbjct: 25 LIEFE-TEDTGINPLMGWETNSNTLSELNLEFSSKELAIEYAKKNKIDFEIIEPQKRKTV 83 Query: 61 ELSYQRNF 68 + SY NF Sbjct: 84 KKSYADNF 91 >gi|328865255|gb|EGG13641.1| ETC complex I subunit conserved family protein [Dictyostelium fasciculatum] Length = 179 Score = 39.3 bits (90), Expect = 0.17, Method: Compositional matrix adjust. Identities = 18/64 (28%), Positives = 34/64 (53%) Query: 7 ITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKELSYQR 66 + + + L+G+ +S TL Q+ L FP+ E+A Y ++G+ Y ++ + K+ Y Sbjct: 102 VNNKWHDGLMGWWASAGTLNQINLTFPAEESAIAYCKENGLNYEILDEDHTTMKKKRYGY 161 Query: 67 NFSY 70 F Y Sbjct: 162 RFIY 165 >gi|115728561|ref|XP_788085.2| PREDICTED: similar to mitochondrial complex I subunit NDUFS4 [Strongylocentrotus purpuratus] gi|115926688|ref|XP_001189274.1| PREDICTED: similar to mitochondrial complex I subunit NDUFS4 [Strongylocentrotus purpuratus] Length = 847 Score = 39.3 bits (90), Expect = 0.18, Method: Composition-based stats. Identities = 20/59 (33%), Positives = 33/59 (55%) Query: 14 PLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKELSYQRNFSYDR 72 PL+G+ S+ D L V + F + E A ++A +G +Y V+ + SY NFS+D+ Sbjct: 782 PLMGWGSTADPLSNVDVSFRTKEEAMRFAEKNGWKYEVMEPQVSKPRAKSYGANFSWDK 840 >gi|71083698|ref|YP_266418.1| ETC complex I subunit region [Candidatus Pelagibacter ubique HTCC1062] gi|71062811|gb|AAZ21814.1| ETC complex I subunit conserved region [Candidatus Pelagibacter ubique HTCC1062] Length = 93 Score = 39.3 bits (90), Expect = 0.19, Method: Compositional matrix adjust. Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 1/68 (1%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 ++EF K I PL+G+ ++ +TL ++ L F S E A +YA + I + +I K Sbjct: 25 LIEF-KTEDTGINPLMGWETNSNTLSELNLEFSSKELAIEYAKKNKIDFEIIEPQKRKTV 83 Query: 61 ELSYQRNF 68 + SY NF Sbjct: 84 KKSYADNF 91 >gi|262277197|ref|ZP_06054990.1| NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, precursor [alpha proteobacterium HIMB114] gi|262224300|gb|EEY74759.1| NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, precursor [alpha proteobacterium HIMB114] Length = 96 Score = 38.9 bits (89), Expect = 0.21, Method: Compositional matrix adjust. Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 1/68 (1%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +L+F+K+ Y + L+ +TSS DT QV L F + + A YA + I++ +I K Sbjct: 28 ILKFDKVKSGY-DHLMNWTSSFDTQSQVSLLFETKKQAIDYAKKYNIEFEIIEPKKNKLI 86 Query: 61 ELSYQRNF 68 SY NF Sbjct: 87 IKSYADNF 94 >gi|68341995|ref|NP_001020317.1| NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial precursor [Rattus norvegicus] gi|81889861|sp|Q5XIF3|NDUS4_RAT RecName: Full=NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial; AltName: Full=Complex I-18 kDa; Short=CI-18 kDa; AltName: Full=NADH-ubiquinone oxidoreductase 18 kDa subunit; Flags: Precursor gi|54035440|gb|AAH83729.1| NADH dehydrogenase (ubiquinone) Fe-S protein 4 [Rattus norvegicus] gi|119850879|gb|AAI27459.1| NADH dehydrogenase (ubiquinone) Fe-S protein 4 [Rattus norvegicus] gi|149059372|gb|EDM10379.1| NADH dehydrogenase (ubiquinone) Fe-S protein 4, 18kDa (NADH-coenzyme Q reductase), isoform CRA_a [Rattus norvegicus] Length = 175 Score = 38.9 bits (89), Expect = 0.21, Method: Compositional matrix adjust. Identities = 21/60 (35%), Positives = 30/60 (50%) Query: 13 EPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKELSYQRNFSYDR 72 PL+G+ S+ D L + L F + E A +A HG Y V K SY NFS+++ Sbjct: 109 NPLMGWASTADPLSNMVLTFSAKEDAVAFAEKHGWSYDVEGRKVPKPKSKSYGANFSWNK 168 >gi|241835856|ref|XP_002415077.1| NADH dehydrogenase, putative [Ixodes scapularis] gi|215509289|gb|EEC18742.1| NADH dehydrogenase, putative [Ixodes scapularis] Length = 190 Score = 38.9 bits (89), Expect = 0.24, Method: Compositional matrix adjust. Identities = 20/60 (33%), Positives = 29/60 (48%) Query: 13 EPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKELSYQRNFSYDR 72 PL+G+ SS D L V + F S EAA + +G Y V +Y NFS+++ Sbjct: 124 NPLMGWCSSGDPLSNVNVNFSSKEAAMSFCEKNGWDYFVDEPAPRRSPRKNYGDNFSWNK 183 >gi|66472400|ref|NP_001018512.1| NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial [Danio rerio] gi|63102519|gb|AAH95734.1| NADH dehydrogenase (ubiquinone) Fe-S protein 4, (NADH-coenzyme Q reductase) [Danio rerio] gi|148725265|emb|CAN87837.1| novel protein similar to vertebrate NADH dehydrogenase (ubiquinone) Fe-S protein 4 (NDUFS4) (zgc:112289) [Danio rerio] gi|148725302|emb|CAN87941.1| novel protein (zgc:112289) [Danio rerio] gi|160774021|gb|AAI55232.1| NADH dehydrogenase (ubiquinone) Fe-S protein 4, (NADH-coenzyme Q reductase) [Danio rerio] Length = 168 Score = 38.9 bits (89), Expect = 0.24, Method: Compositional matrix adjust. Identities = 20/60 (33%), Positives = 31/60 (51%) Query: 13 EPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKELSYQRNFSYDR 72 PL+G++S+ D L + L F + E A +A +G Y + + SY NFS+DR Sbjct: 102 NPLMGWSSTADPLSNMVLTFSTKEDAIAFAEKNGWSYDITEKRVPKPRVKSYGANFSWDR 161 >gi|47226576|emb|CAG08592.1| unnamed protein product [Tetraodon nigroviridis] Length = 170 Score = 38.9 bits (89), Expect = 0.26, Method: Compositional matrix adjust. Identities = 20/60 (33%), Positives = 30/60 (50%) Query: 13 EPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKELSYQRNFSYDR 72 PL+G+ S+ D L + L F S E A +A +G Y + + SY NFS+D+ Sbjct: 104 NPLMGWASTADPLSNMVLSFSSKEDAVAFAEKNGWSYDITEKRSPKPRVKSYGANFSWDK 163 >gi|221120275|ref|XP_002157726.1| PREDICTED: similar to LOC100125122 protein [Hydra magnipapillata] Length = 168 Score = 38.5 bits (88), Expect = 0.28, Method: Compositional matrix adjust. Identities = 21/60 (35%), Positives = 31/60 (51%) Query: 13 EPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKELSYQRNFSYDR 72 PL+G+ SS D L +L F + EAA +Y HG + V + SY NFS+++ Sbjct: 102 NPLMGWASSGDPLSNTQLQFSTREAAIQYCKSHGWNHEVEEPTLPKFRPKSYGSNFSWNK 161 >gi|326426654|gb|EGD72224.1| NADH dehydrogenase iron-sulfur protein 4 [Salpingoeca sp. ATCC 50818] Length = 180 Score = 38.5 bits (88), Expect = 0.29, Method: Compositional matrix adjust. Identities = 19/62 (30%), Positives = 32/62 (51%) Query: 11 YIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKELSYQRNFSY 70 + PL+G+ S+ D L V + F S E A + +G Y V + + + +Y NFS+ Sbjct: 112 WQNPLMGWASTADPLSNVDVKFDSKEDAIAFCERNGWTYYVHEPSRRRRMKKNYGNNFSW 171 Query: 71 DR 72 D+ Sbjct: 172 DK 173 >gi|330799992|ref|XP_003288024.1| hypothetical protein DICPUDRAFT_55192 [Dictyostelium purpureum] gi|325081983|gb|EGC35481.1| hypothetical protein DICPUDRAFT_55192 [Dictyostelium purpureum] Length = 166 Score = 38.5 bits (88), Expect = 0.30, Method: Compositional matrix adjust. Identities = 19/58 (32%), Positives = 32/58 (55%) Query: 13 EPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKELSYQRNFSY 70 + L+G+ SSKD+L Q+ L F S A Y + G+ Y ++ ++ +K+ Y F Y Sbjct: 94 DRLMGWCSSKDSLNQLNLKFSSEADAVAYCKEIGLDYTIVGGEEQIKKKKKYGYRFRY 151 >gi|116780730|gb|ABK21793.1| unknown [Picea sitchensis] gi|224285613|gb|ACN40525.1| unknown [Picea sitchensis] Length = 155 Score = 38.5 bits (88), Expect = 0.35, Method: Compositional matrix adjust. Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 3/61 (4%) Query: 13 EPLLGYTSSKD---TLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKELSYQRNFS 69 PL+G+TS+ D + + L+F S EAA+ +A HG +Y V + +Y NF Sbjct: 87 NPLMGWTSTGDPYANVGEAGLYFKSKEAAQSFAEKHGWEYVVKDPHTPLLRPKAYADNFK 146 Query: 70 Y 70 + Sbjct: 147 W 147 >gi|116787585|gb|ABK24565.1| unknown [Picea sitchensis] Length = 155 Score = 38.1 bits (87), Expect = 0.37, Method: Compositional matrix adjust. Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 3/61 (4%) Query: 13 EPLLGYTSSKD---TLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKELSYQRNFS 69 PL+G+TS+ D + + L+F S EAA+ +A HG +Y V + +Y NF Sbjct: 87 NPLMGWTSTGDPYANVGEAGLYFKSKEAAQSFAEKHGWEYVVKDPHTPLLRPKAYADNFK 146 Query: 70 Y 70 + Sbjct: 147 W 147 >gi|255568613|ref|XP_002525280.1| NADH-ubiquinone oxidoreductase 18 kDa subunit, mitochondrial precursor, putative [Ricinus communis] gi|223535438|gb|EEF37108.1| NADH-ubiquinone oxidoreductase 18 kDa subunit, mitochondrial precursor, putative [Ricinus communis] Length = 159 Score = 38.1 bits (87), Expect = 0.40, Method: Compositional matrix adjust. Identities = 25/69 (36%), Positives = 34/69 (49%), Gaps = 3/69 (4%) Query: 8 TPPYIEPLLGYTSSKDTLQQVK---LFFPSLEAAEKYASDHGIQYCVIPSCKESQKELSY 64 T + PL+G+TS+ D V L F S EAA+++A HG +Y V K SY Sbjct: 85 TQKWENPLMGWTSTGDPYANVGDSALSFDSEEAAKEFAERHGWEYVVKKRHTPLLKVKSY 144 Query: 65 QRNFSYDRL 73 NF + L Sbjct: 145 ADNFKFKGL 153 >gi|296088915|emb|CBI38470.3| unnamed protein product [Vitis vinifera] Length = 114 Score = 38.1 bits (87), Expect = 0.44, Method: Compositional matrix adjust. Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 3/66 (4%) Query: 8 TPPYIEPLLGYTSSKD---TLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKELSY 64 T + PL+G+TS+ D + L F S EAA+ +A HG +Y V K +Y Sbjct: 41 TQKWENPLMGWTSTGDPYANVGDAGLGFDSEEAAKAFAEKHGWEYTVKKRQTPLLKTKAY 100 Query: 65 QRNFSY 70 NF + Sbjct: 101 ADNFKW 106 >gi|225438227|ref|XP_002265704.1| PREDICTED: hypothetical protein [Vitis vinifera] gi|147858131|emb|CAN83933.1| hypothetical protein VITISV_035766 [Vitis vinifera] Length = 154 Score = 37.7 bits (86), Expect = 0.56, Method: Compositional matrix adjust. Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 3/66 (4%) Query: 8 TPPYIEPLLGYTSSKD---TLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKELSY 64 T + PL+G+TS+ D + L F S EAA+ +A HG +Y V K +Y Sbjct: 81 TQKWENPLMGWTSTGDPYANVGDAGLGFDSEEAAKAFAEKHGWEYTVKKRQTPLLKTKAY 140 Query: 65 QRNFSY 70 NF + Sbjct: 141 ADNFKW 146 >gi|326492291|dbj|BAK01929.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 158 Score = 37.7 bits (86), Expect = 0.59, Method: Compositional matrix adjust. Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 3/61 (4%) Query: 13 EPLLGYTSSKD---TLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKELSYQRNFS 69 PL+G+TS+ D + + L F S E+A+ +A HG +Y V K +Y NF Sbjct: 88 NPLMGWTSTGDPYANVGEAGLTFDSAESAKAFADKHGWEYVVRKRHTPLLKPKTYAENFK 147 Query: 70 Y 70 + Sbjct: 148 W 148 >gi|159467431|ref|XP_001691895.1| NADH:ubiquinone oxidoreductase subunit [Chlamydomonas reinhardtii] gi|158278622|gb|EDP04385.1| NADH:ubiquinone oxidoreductase subunit [Chlamydomonas reinhardtii] Length = 201 Score = 37.0 bits (84), Expect = 0.83, Method: Compositional matrix adjust. Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 6/68 (8%) Query: 11 YIEPLLGYTSSKDTLQQVKL---FFPSLEA---AEKYASDHGIQYCVIPSCKESQKELSY 64 +I PL+G+TSS DT Q + F+ + EA E+ ++ IQ IP S++ +Y Sbjct: 82 WINPLIGWTSSADTKHQAAVNFQFYTAEEAIAFCERQGWEYEIQVPQIPRDTRSRRYAAY 141 Query: 65 QRNFSYDR 72 NFS R Sbjct: 142 GDNFSIKR 149 >gi|332030052|gb|EGI69877.1| NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial [Acromyrmex echinatior] Length = 186 Score = 37.0 bits (84), Expect = 0.84, Method: Compositional matrix adjust. Identities = 20/60 (33%), Positives = 31/60 (51%) Query: 13 EPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKELSYQRNFSYDR 72 PL+G+TSS D + +K+ F + E A + G +Y V K SY NFS+++ Sbjct: 120 NPLMGWTSSGDPMSNIKVDFATKEEAIAHCKKMGWEYYVQKPNVSQPKPRSYGSNFSWNK 179 >gi|170089301|ref|XP_001875873.1| predicted protein [Laccaria bicolor S238N-H82] gi|164649133|gb|EDR13375.1| predicted protein [Laccaria bicolor S238N-H82] Length = 123 Score = 37.0 bits (84), Expect = 0.88, Method: Compositional matrix adjust. Identities = 21/58 (36%), Positives = 28/58 (48%) Query: 13 EPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKELSYQRNFSY 70 PL+GY+SS D +Q +L F S E A +A G Y V E +Y N+ Y Sbjct: 55 NPLMGYSSSADYMQGTRLTFRSKEDAVHFAEKQGWDYYVQTPTVERIPPKNYAENYVY 112 >gi|296413730|ref|XP_002836562.1| hypothetical protein [Tuber melanosporum Mel28] gi|295630389|emb|CAZ80753.1| unnamed protein product [Tuber melanosporum] Length = 209 Score = 37.0 bits (84), Expect = 0.89, Method: Compositional matrix adjust. Identities = 19/56 (33%), Positives = 29/56 (51%) Query: 13 EPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKELSYQRNF 68 PL+G+ SS D +Q +FF S E A +A G ++ V + + + SY NF Sbjct: 141 NPLMGWQSSGDFMQGTHIFFKSKEDAISFAEKQGYKWFVKEPNERAFRAKSYSANF 196 >gi|255631034|gb|ACU15881.1| unknown [Glycine max] Length = 146 Score = 37.0 bits (84), Expect = 0.93, Method: Compositional matrix adjust. Identities = 24/66 (36%), Positives = 32/66 (48%), Gaps = 3/66 (4%) Query: 8 TPPYIEPLLGYTSSKDTLQQVK---LFFPSLEAAEKYASDHGIQYCVIPSCKESQKELSY 64 T + PL+G+TS+ D V L F S EAA+ +A HG +Y V K SY Sbjct: 72 TQKWENPLMGWTSTGDPYSHVGDSALTFDSEEAAKAFAEKHGWEYSVKKPHTPLLKVKSY 131 Query: 65 QRNFSY 70 NF + Sbjct: 132 ADNFKW 137 >gi|242050704|ref|XP_002463096.1| hypothetical protein SORBIDRAFT_02g037780 [Sorghum bicolor] gi|241926473|gb|EER99617.1| hypothetical protein SORBIDRAFT_02g037780 [Sorghum bicolor] Length = 157 Score = 37.0 bits (84), Expect = 0.95, Method: Compositional matrix adjust. Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 3/61 (4%) Query: 13 EPLLGYTSSKD---TLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKELSYQRNFS 69 PL+G+TS+ D + + L F S E+A+ +A HG Y V K +Y NF Sbjct: 88 NPLMGWTSTGDPYANVGEAGLTFDSAESAKAFAEKHGWNYVVRKRHTPLLKPKAYAENFK 147 Query: 70 Y 70 + Sbjct: 148 W 148 >gi|195642452|gb|ACG40694.1| NADH-ubiquinone oxidoreductase 18 kDa subunit [Zea mays] Length = 157 Score = 37.0 bits (84), Expect = 0.97, Method: Compositional matrix adjust. Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 3/61 (4%) Query: 13 EPLLGYTSSKD---TLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKELSYQRNFS 69 PL+G+TS+ D + + L F S E+A+ +A HG Y V K +Y NF Sbjct: 88 NPLMGWTSTGDPYANVGEAGLTFNSAESAKAFAEKHGWNYVVRKRHTPLLKPKAYAENFK 147 Query: 70 Y 70 + Sbjct: 148 W 148 >gi|212722756|ref|NP_001132398.1| hypothetical protein LOC100193844 [Zea mays] gi|194694272|gb|ACF81220.1| unknown [Zea mays] gi|195608562|gb|ACG26111.1| NADH-ubiquinone oxidoreductase 18 kDa subunit [Zea mays] Length = 157 Score = 37.0 bits (84), Expect = 0.99, Method: Compositional matrix adjust. Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 3/61 (4%) Query: 13 EPLLGYTSSKD---TLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKELSYQRNFS 69 PL+G+TS+ D + + L F S E+A+ +A HG Y V K +Y NF Sbjct: 88 NPLMGWTSTGDPYANVGEAGLTFNSAESAKAFAEKHGWNYVVRKRHTPLLKPKAYAENFK 147 Query: 70 Y 70 + Sbjct: 148 W 148 >gi|115473055|ref|NP_001060126.1| Os07g0585800 [Oryza sativa Japonica Group] gi|50509945|dbj|BAD30267.1| NADH-ubiquinone oxidoreductase-related-like protein [Oryza sativa Japonica Group] gi|113611662|dbj|BAF22040.1| Os07g0585800 [Oryza sativa Japonica Group] gi|218199922|gb|EEC82349.1| hypothetical protein OsI_26657 [Oryza sativa Indica Group] gi|222637356|gb|EEE67488.1| hypothetical protein OsJ_24916 [Oryza sativa Japonica Group] Length = 159 Score = 36.6 bits (83), Expect = 1.0, Method: Compositional matrix adjust. Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 3/61 (4%) Query: 13 EPLLGYTSSKD---TLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKELSYQRNFS 69 PL+G+TS+ D + + L F S ++A+ +A HG Y V K SY NF Sbjct: 90 NPLMGWTSTGDPYANVGEAGLTFDSADSAKAFAEKHGWDYVVRKRHTPLLKAKSYAENFK 149 Query: 70 Y 70 + Sbjct: 150 W 150 >gi|224067198|ref|XP_002302404.1| predicted protein [Populus trichocarpa] gi|222844130|gb|EEE81677.1| predicted protein [Populus trichocarpa] Length = 112 Score = 36.6 bits (83), Expect = 1.1, Method: Compositional matrix adjust. Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 3/66 (4%) Query: 8 TPPYIEPLLGYTSSKD---TLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKELSY 64 T + PL+G+TS+ D + + + F S EAA+ +A HG +Y V K SY Sbjct: 45 TQKWENPLMGWTSTGDPYANVGEAGISFDSEEAAKAFAEKHGWEYEVKKRHTPLLKPKSY 104 Query: 65 QRNFSY 70 NF + Sbjct: 105 ADNFKW 110 >gi|223974149|gb|ACN31262.1| unknown [Zea mays] Length = 115 Score = 36.6 bits (83), Expect = 1.1, Method: Compositional matrix adjust. Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 3/66 (4%) Query: 8 TPPYIEPLLGYTSSKD---TLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKELSY 64 T + PL+G+TS+ D + + L F S E+A+ +A HG Y V + +Y Sbjct: 41 TQKWENPLMGWTSTGDPYANVGEAGLTFDSAESAKAFAEKHGWNYVVRKRHAPLLRPKAY 100 Query: 65 QRNFSY 70 NF + Sbjct: 101 AENFKW 106 >gi|307213719|gb|EFN89068.1| NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial [Harpegnathos saltator] Length = 190 Score = 36.2 bits (82), Expect = 1.6, Method: Compositional matrix adjust. Identities = 19/60 (31%), Positives = 31/60 (51%) Query: 13 EPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKELSYQRNFSYDR 72 PL+G+TSS D + +K+ F S E A + G Y + + K +Y NFS+++ Sbjct: 124 NPLMGWTSSGDPMSNIKVDFTSQEEAIVHCKKMGWDYYIQKPNVSAPKPRTYGMNFSWNK 183 >gi|226502326|ref|NP_001147419.1| LOC100281028 [Zea mays] gi|195611248|gb|ACG27454.1| NADH-ubiquinone oxidoreductase 18 kDa subunit [Zea mays] Length = 157 Score = 36.2 bits (82), Expect = 1.6, Method: Compositional matrix adjust. Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 3/61 (4%) Query: 13 EPLLGYTSSKD---TLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKELSYQRNFS 69 PL+G+TS+ D + + L F S E+A+ +A HG Y V + +Y NF Sbjct: 88 NPLMGWTSTGDPYANVGEAGLTFDSAESAKAFAEKHGWNYVVRKRHAPLLRPKAYAENFK 147 Query: 70 Y 70 + Sbjct: 148 W 148 >gi|224097254|ref|XP_002310893.1| predicted protein [Populus trichocarpa] gi|118485306|gb|ABK94512.1| unknown [Populus trichocarpa] gi|222853796|gb|EEE91343.1| predicted protein [Populus trichocarpa] Length = 159 Score = 36.2 bits (82), Expect = 1.7, Method: Compositional matrix adjust. Identities = 22/61 (36%), Positives = 30/61 (49%), Gaps = 3/61 (4%) Query: 13 EPLLGYTSSKDTLQQVK---LFFPSLEAAEKYASDHGIQYCVIPSCKESQKELSYQRNFS 69 PL+G+TS+ D V L F S EAA+ +A HG +Y V K +Y NF Sbjct: 90 NPLMGWTSTGDPYAHVGDSALGFDSEEAAKAFAERHGWEYVVKKRHTPLLKVKAYADNFK 149 Query: 70 Y 70 + Sbjct: 150 F 150 >gi|118489631|gb|ABK96617.1| unknown [Populus trichocarpa x Populus deltoides] Length = 159 Score = 35.8 bits (81), Expect = 1.8, Method: Compositional matrix adjust. Identities = 22/61 (36%), Positives = 30/61 (49%), Gaps = 3/61 (4%) Query: 13 EPLLGYTSSKDTLQQVK---LFFPSLEAAEKYASDHGIQYCVIPSCKESQKELSYQRNFS 69 PL+G+TS+ D V L F S EAA+ +A HG +Y V K +Y NF Sbjct: 90 NPLMGWTSTGDPYAHVGDSALGFDSEEAAKAFAERHGWEYVVKKRHTPLLKVKAYADNFK 149 Query: 70 Y 70 + Sbjct: 150 F 150 >gi|307169781|gb|EFN62326.1| NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial [Camponotus floridanus] Length = 183 Score = 35.8 bits (81), Expect = 1.8, Method: Compositional matrix adjust. Identities = 19/59 (32%), Positives = 31/59 (52%) Query: 14 PLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKELSYQRNFSYDR 72 PL+G+TSS D + +++ F + E A + G +Y V K SY NFS+++ Sbjct: 118 PLMGWTSSGDPMSNIQVNFATKEEAIAHCKKMGWEYYVQKPNLNQPKPRSYGINFSWNK 176 >gi|21555571|gb|AAM63888.1| unknown [Arabidopsis thaliana] Length = 154 Score = 35.8 bits (81), Expect = 2.3, Method: Compositional matrix adjust. Identities = 23/61 (37%), Positives = 29/61 (47%), Gaps = 3/61 (4%) Query: 13 EPLLGYTSSKDTLQQV---KLFFPSLEAAEKYASDHGIQYCVIPSCKESQKELSYQRNFS 69 PL+G+TS+ D V L F S EAA+ +A HG Y V K SY NF Sbjct: 86 NPLMGWTSTGDPYANVGDSALAFDSEEAAKSFAERHGWDYKVKKPNTPLLKVKSYSDNFK 145 Query: 70 Y 70 + Sbjct: 146 W 146 >gi|218512993|ref|ZP_03509833.1| probable NADH-ubiquinone oxidoreductase protein [Rhizobium etli 8C-3] Length = 35 Score = 35.4 bits (80), Expect = 2.4, Method: Compositional matrix adjust. Identities = 14/34 (41%), Positives = 23/34 (67%) Query: 45 HGIQYCVIPSCKESQKELSYQRNFSYDRLEPWTH 78 +GI+Y VI + +++ ++Y NF Y R +PWTH Sbjct: 2 NGIEYRVIAPKEPARQVVAYPDNFRYTRTQPWTH 35 >gi|297797623|ref|XP_002866696.1| hypothetical protein ARALYDRAFT_358798 [Arabidopsis lyrata subsp. lyrata] gi|297312531|gb|EFH42955.1| hypothetical protein ARALYDRAFT_358798 [Arabidopsis lyrata subsp. lyrata] Length = 154 Score = 35.4 bits (80), Expect = 2.4, Method: Compositional matrix adjust. Identities = 23/61 (37%), Positives = 29/61 (47%), Gaps = 3/61 (4%) Query: 13 EPLLGYTSSKDTLQQVK---LFFPSLEAAEKYASDHGIQYCVIPSCKESQKELSYQRNFS 69 PL+G+TS+ D V L F S EAA+ +A HG Y V K SY NF Sbjct: 86 NPLMGWTSTGDPYANVGDSALAFDSEEAAKSFAERHGWDYKVKKPNTPLLKVKSYSDNFK 145 Query: 70 Y 70 + Sbjct: 146 W 146 >gi|255628331|gb|ACU14510.1| unknown [Glycine max] Length = 146 Score = 35.4 bits (80), Expect = 2.6, Method: Compositional matrix adjust. Identities = 23/66 (34%), Positives = 32/66 (48%), Gaps = 3/66 (4%) Query: 8 TPPYIEPLLGYTSSKDTLQQVK---LFFPSLEAAEKYASDHGIQYCVIPSCKESQKELSY 64 T + PL+G+TS+ D V L F S +AA+ +A HG +Y V K SY Sbjct: 72 TQKWENPLMGWTSTGDPYSHVGDSALTFDSEQAAKAFAERHGWEYSVKKPHTPLLKVKSY 131 Query: 65 QRNFSY 70 NF + Sbjct: 132 ADNFKW 137 >gi|15240784|ref|NP_201560.1| FRO1 (FROSTBITE1); NADH dehydrogenase (ubiquinone) [Arabidopsis thaliana] gi|9757880|dbj|BAB08467.1| unnamed protein product [Arabidopsis thaliana] gi|26452345|dbj|BAC43258.1| unknown protein [Arabidopsis thaliana] gi|28372842|gb|AAO39903.1| At5g67590 [Arabidopsis thaliana] gi|332010981|gb|AED98364.1| NADH dehydrogenase (ubiquinone) Fe-S protein 4 [Arabidopsis thaliana] Length = 154 Score = 35.4 bits (80), Expect = 2.6, Method: Compositional matrix adjust. Identities = 23/61 (37%), Positives = 29/61 (47%), Gaps = 3/61 (4%) Query: 13 EPLLGYTSSKDTLQQV---KLFFPSLEAAEKYASDHGIQYCVIPSCKESQKELSYQRNFS 69 PL+G+TS+ D V L F S EAA+ +A HG Y V K SY NF Sbjct: 86 NPLMGWTSTGDPYANVGDSALAFDSEEAAKSFAERHGWDYKVKKPNTPLLKVKSYSDNFK 145 Query: 70 Y 70 + Sbjct: 146 W 146 >gi|322798482|gb|EFZ20154.1| hypothetical protein SINV_12903 [Solenopsis invicta] Length = 165 Score = 35.0 bits (79), Expect = 3.1, Method: Compositional matrix adjust. Identities = 19/60 (31%), Positives = 29/60 (48%) Query: 13 EPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKELSYQRNFSYDR 72 PL+G+TSS D + + + F + E A + G Y V K SY NFS+++ Sbjct: 99 NPLMGWTSSGDPMSNINVDFATKEEAIAHCKKMGWDYYVQEPNVSQPKPRSYGMNFSWNK 158 >gi|68161122|gb|AAY86992.1| NADH dehydrogenase [Ictalurus punctatus] Length = 134 Score = 35.0 bits (79), Expect = 3.2, Method: Compositional matrix adjust. Identities = 18/58 (31%), Positives = 29/58 (50%) Query: 15 LLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKELSYQRNFSYDR 72 L+G+ S+ D L + L F + E A +A +G Y + + SY NFS+D+ Sbjct: 70 LMGWASTADPLSNMTLTFSTKEDAIAFAEKNGWSYDITEKRTPKPRVKSYGANFSWDK 127 >gi|50425319|ref|XP_461253.1| DEHA2F20812p [Debaryomyces hansenii CBS767] gi|49656922|emb|CAG89642.1| DEHA2F20812p [Debaryomyces hansenii] Length = 158 Score = 34.3 bits (77), Expect = 5.5, Method: Compositional matrix adjust. Identities = 18/54 (33%), Positives = 28/54 (51%) Query: 15 LLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKELSYQRNF 68 L+GY SS D +Q + F + EAA ++A G + V K+ ++ Y NF Sbjct: 92 LIGYQSSADYMQGTNMHFDTKEAAIRFAQGQGWDHYVQEPKKKHFRKKDYSTNF 145 >gi|39944250|ref|XP_361662.1| hypothetical protein MGG_04136 [Magnaporthe oryzae 70-15] gi|145014871|gb|EDJ99439.1| hypothetical protein MGG_04136 [Magnaporthe oryzae 70-15] Length = 207 Score = 33.9 bits (76), Expect = 7.6, Method: Compositional matrix adjust. Identities = 19/58 (32%), Positives = 28/58 (48%) Query: 13 EPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKELSYQRNFSY 70 PL+G+ SS D +Q ++F S E A +A G +Y V + +Y NF Y Sbjct: 139 NPLMGWQSSGDFMQGSHIYFKSKEEAIAFAEKQGYEYFVQEPNERKITPKAYANNFLY 196 Searching..................................................done Results from round 2 >gi|227821972|ref|YP_002825943.1| putative NADH-ubiquinone oxidoreductase subunit [Sinorhizobium fredii NGR234] gi|227340972|gb|ACP25190.1| putative NADH-ubiquinone oxidoreductase subunit [Sinorhizobium fredii NGR234] Length = 171 Score = 146 bits (368), Expect = 1e-33, Method: Composition-based stats. Identities = 36/78 (46%), Positives = 52/78 (66%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +LEF++ P I+P++GYTSS D QQ++L F S E A YA +GI Y VI ++K Sbjct: 94 VLEFDQEKPRTIDPIMGYTSSGDMRQQLRLTFESAEQAIAYAERNGIDYRVIAPKDATRK 153 Query: 61 ELSYQRNFSYDRLEPWTH 78 +SY NF ++R++PWTH Sbjct: 154 SVSYSDNFRFNRMQPWTH 171 >gi|154253416|ref|YP_001414240.1| ETC complex I subunit region [Parvibaculum lavamentivorans DS-1] gi|154157366|gb|ABS64583.1| ETC complex I subunit conserved region [Parvibaculum lavamentivorans DS-1] Length = 218 Score = 143 bits (362), Expect = 7e-33, Method: Composition-based stats. Identities = 32/78 (41%), Positives = 44/78 (56%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +LEFE + +EPL+G+TSS+DT QV L F S E A YA HG++Y + + Sbjct: 141 VLEFEPGSARDVEPLMGWTSSRDTNAQVLLRFDSKEEAVAYAEKHGVEYQLFEPKPRRRT 200 Query: 61 ELSYQRNFSYDRLEPWTH 78 +Y NF + R WTH Sbjct: 201 IKAYADNFKFGRQGLWTH 218 >gi|239831555|ref|ZP_04679884.1| ETC complex I subunit conserved region [Ochrobactrum intermedium LMG 3301] gi|239823822|gb|EEQ95390.1| ETC complex I subunit conserved region [Ochrobactrum intermedium LMG 3301] Length = 118 Score = 141 bits (357), Expect = 3e-32, Method: Composition-based stats. Identities = 35/78 (44%), Positives = 51/78 (65%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +LE+E +P +EPL+GYTSS D Q++LFF + E A YA +GI Y V ++ ++ Sbjct: 41 LLEYEPESPRMVEPLMGYTSSGDMKSQIRLFFATREEAVDYAKRNGIAYRVFEPNEQKRR 100 Query: 61 ELSYQRNFSYDRLEPWTH 78 ++SY NF +DR PWTH Sbjct: 101 KVSYSDNFRFDRTMPWTH 118 >gi|217976735|ref|YP_002360882.1| ETC complex I subunit conserved region [Methylocella silvestris BL2] gi|217502111|gb|ACK49520.1| ETC complex I subunit conserved region [Methylocella silvestris BL2] Length = 101 Score = 140 bits (354), Expect = 5e-32, Method: Composition-based stats. Identities = 35/78 (44%), Positives = 44/78 (56%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +LEFE +P I+PL+G+TSS D QV+L F + A YA HGI Y V +K Sbjct: 24 LLEFEPASPREIDPLMGWTSSSDMKSQVRLRFGDKDEAIAYAQKHGIVYRVEEPKPHPRK 83 Query: 61 ELSYQRNFSYDRLEPWTH 78 LSY NF R+ WTH Sbjct: 84 ILSYSDNFRSTRIGQWTH 101 >gi|302383026|ref|YP_003818849.1| ETC complex I subunit conserved region [Brevundimonas subvibrioides ATCC 15264] gi|302193654|gb|ADL01226.1| ETC complex I subunit conserved region [Brevundimonas subvibrioides ATCC 15264] Length = 101 Score = 140 bits (354), Expect = 5e-32, Method: Composition-based stats. Identities = 30/77 (38%), Positives = 44/77 (57%) Query: 2 LEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKE 61 L+FE + I+PL+G+TSS D QV+L F + E A YA HGI + + + Sbjct: 25 LDFEPASARTIDPLMGWTSSSDMNGQVRLTFETREEAVAYAERHGIPFRLHEPQEAPVIL 84 Query: 62 LSYQRNFSYDRLEPWTH 78 +Y NF+ +R +PWTH Sbjct: 85 KAYADNFATNRKQPWTH 101 >gi|312112977|ref|YP_004010573.1| ETC complex I subunit conserved region [Rhodomicrobium vannielii ATCC 17100] gi|311218106|gb|ADP69474.1| ETC complex I subunit conserved region [Rhodomicrobium vannielii ATCC 17100] Length = 103 Score = 140 bits (353), Expect = 8e-32, Method: Composition-based stats. Identities = 34/78 (43%), Positives = 45/78 (57%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +L++E T IEPL+G+TSS D L QV+LFF + E A YA + I Y V + Sbjct: 26 VLDYEPATAREIEPLMGWTSSNDMLSQVRLFFETKEEAVDYAKKNAIPYRVFEPNPRAAI 85 Query: 61 ELSYQRNFSYDRLEPWTH 78 + SY NF Y R+ WTH Sbjct: 86 KKSYADNFKYGRIGSWTH 103 >gi|27379525|ref|NP_771054.1| NADH-ubiquinone oxidoreductase-related protein [Bradyrhizobium japonicum USDA 110] gi|27352677|dbj|BAC49679.1| blr4414 [Bradyrhizobium japonicum USDA 110] Length = 154 Score = 139 bits (352), Expect = 1e-31, Method: Composition-based stats. Identities = 34/77 (44%), Positives = 45/77 (58%) Query: 2 LEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKE 61 L++E P +EPL+G+TSS D QQ+ L F S E A Y GI Y VI ++ Sbjct: 78 LDYEPEQPRAVEPLMGWTSSGDMKQQITLRFDSKEEAVAYCERKGIAYQVIEPQDSIRRP 137 Query: 62 LSYQRNFSYDRLEPWTH 78 ++Y NFS+ R EPWTH Sbjct: 138 VAYADNFSFRRGEPWTH 154 >gi|91977005|ref|YP_569664.1| ETC complex I subunit region [Rhodopseudomonas palustris BisB5] gi|91683461|gb|ABE39763.1| ETC complex I subunit conserved region [Rhodopseudomonas palustris BisB5] Length = 101 Score = 139 bits (351), Expect = 1e-31, Method: Composition-based stats. Identities = 33/77 (42%), Positives = 44/77 (57%) Query: 2 LEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKE 61 L++E P IEPL+G+TSS D QQV L F + E A Y GI Y V+ ++ Sbjct: 25 LDYEPEQPRMIEPLMGWTSSGDMQQQVSLRFETREEAIAYCEREGIPYQVLEPKTPVRRR 84 Query: 62 LSYQRNFSYDRLEPWTH 78 +Y NF++ R EPWTH Sbjct: 85 AAYADNFAFRRGEPWTH 101 >gi|158423185|ref|YP_001524477.1| putative NADH dehydrogenase (ubiquinone) Fe-S protein 4 [Azorhizobium caulinodans ORS 571] gi|158330074|dbj|BAF87559.1| putative NADH dehydrogenase (ubiquinone) Fe-S protein 4 [Azorhizobium caulinodans ORS 571] Length = 117 Score = 139 bits (351), Expect = 1e-31, Method: Composition-based stats. Identities = 33/78 (42%), Positives = 48/78 (61%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +LE+E P +EPL+GYTSS D QV+L F + E A YA HGI Y V + +++ Sbjct: 40 VLEYEPERPRQVEPLMGYTSSSDMKSQVRLRFETREEAVAYAERHGIPYQVAEPHEPARR 99 Query: 61 ELSYQRNFSYDRLEPWTH 78 ++Y NF++ R+ WTH Sbjct: 100 RIAYSDNFAHARVGQWTH 117 >gi|163760320|ref|ZP_02167403.1| ETC complex I subunit conserved region [Hoeflea phototrophica DFL-43] gi|162282719|gb|EDQ33007.1| ETC complex I subunit conserved region [Hoeflea phototrophica DFL-43] Length = 101 Score = 139 bits (351), Expect = 1e-31, Method: Composition-based stats. Identities = 33/78 (42%), Positives = 52/78 (66%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +LEFE T I+P++GYT+S D Q++L F + EAA YA+ +GI + VI + ++ Sbjct: 24 VLEFEPETARSIDPIMGYTTSSDMKSQIRLRFETQEAAVAYATRNGIAFRVIEPKESKRR 83 Query: 61 ELSYQRNFSYDRLEPWTH 78 +++Y NF +DR +PWTH Sbjct: 84 KVAYSDNFRFDRRQPWTH 101 >gi|298291599|ref|YP_003693538.1| ETC complex I subunit conserved region [Starkeya novella DSM 506] gi|296928110|gb|ADH88919.1| ETC complex I subunit conserved region [Starkeya novella DSM 506] Length = 101 Score = 139 bits (351), Expect = 1e-31, Method: Composition-based stats. Identities = 33/78 (42%), Positives = 48/78 (61%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +L++E P +EPL+GYTSS D Q++L F S E A YA HGI Y V + +++ Sbjct: 24 VLDYEPEQPRQVEPLMGYTSSGDMKSQLRLRFDSKEEAIAYAERHGIAYQVQEPQEATRR 83 Query: 61 ELSYQRNFSYDRLEPWTH 78 ++Y NFS+ R+ WTH Sbjct: 84 RMAYADNFSFRRIGQWTH 101 >gi|306842015|ref|ZP_07474688.1| ETC complex I subunit conserved region [Brucella sp. BO2] gi|306287856|gb|EFM59276.1| ETC complex I subunit conserved region [Brucella sp. BO2] Length = 89 Score = 139 bits (351), Expect = 1e-31, Method: Composition-based stats. Identities = 35/78 (44%), Positives = 52/78 (66%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +LE+E P +EPL+GYTSS D Q++LFF S E A YA+ +GI Y ++ + ++ Sbjct: 12 LLEYEPEKPRVVEPLMGYTSSGDMKSQIRLFFASQEEAVAYATRNGIPYRLMEPHEPKRR 71 Query: 61 ELSYQRNFSYDRLEPWTH 78 ++SY NF +DR +PWTH Sbjct: 72 KVSYSDNFRFDRPQPWTH 89 >gi|265983841|ref|ZP_06096576.1| ETC complex I subunit region [Brucella sp. 83/13] gi|264662433|gb|EEZ32694.1| ETC complex I subunit region [Brucella sp. 83/13] Length = 110 Score = 139 bits (351), Expect = 1e-31, Method: Composition-based stats. Identities = 35/78 (44%), Positives = 52/78 (66%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +LE+E P +EPL+GYTSS D Q++LFF S E A YA+ +GI Y ++ + ++ Sbjct: 33 LLEYEPEKPRVVEPLMGYTSSGDMKSQIRLFFASQEEAVAYATRNGIPYRLMEPHEPKRR 92 Query: 61 ELSYQRNFSYDRLEPWTH 78 ++SY NF +DR +PWTH Sbjct: 93 KVSYSDNFRFDRPQPWTH 110 >gi|146340628|ref|YP_001205676.1| putative ETC complex I subunit region protein (fragment) [Bradyrhizobium sp. ORS278] gi|146193434|emb|CAL77450.1| putative ETC complex I subunit conserved region protein (fragment) [Bradyrhizobium sp. ORS278] Length = 101 Score = 139 bits (350), Expect = 1e-31, Method: Composition-based stats. Identities = 35/77 (45%), Positives = 47/77 (61%) Query: 2 LEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKE 61 L++E P +EPL+G+TSS D QQV L F S E A Y GI Y VI + +++ Sbjct: 25 LDYEPEQPRSVEPLMGWTSSSDMKQQVTLRFDSKEEAIAYCERKGIPYQVIEPKEPVKRQ 84 Query: 62 LSYQRNFSYDRLEPWTH 78 ++Y NFS+ R EPWTH Sbjct: 85 VAYADNFSFRRGEPWTH 101 >gi|182678525|ref|YP_001832671.1| ETC complex I subunit region [Beijerinckia indica subsp. indica ATCC 9039] gi|182634408|gb|ACB95182.1| ETC complex I subunit conserved region [Beijerinckia indica subsp. indica ATCC 9039] Length = 101 Score = 139 bits (350), Expect = 1e-31, Method: Composition-based stats. Identities = 32/78 (41%), Positives = 43/78 (55%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +L F+ +P +PL+G+TSS D QV+L F + E A YA +G+ Y V +K Sbjct: 24 LLVFDPASPRSTDPLMGWTSSGDMNSQVRLRFTTKEEAIAYAEKNGLDYRVEEPKLAPRK 83 Query: 61 ELSYQRNFSYDRLEPWTH 78 LSY NF R PWTH Sbjct: 84 ILSYSDNFKSTRAGPWTH 101 >gi|254718856|ref|ZP_05180667.1| ETC complex I subunit conserved protein [Brucella sp. 83/13] gi|306837642|ref|ZP_07470512.1| ETC complex I subunit conserved region [Brucella sp. NF 2653] gi|306407291|gb|EFM63500.1| ETC complex I subunit conserved region [Brucella sp. NF 2653] Length = 101 Score = 138 bits (349), Expect = 2e-31, Method: Composition-based stats. Identities = 35/78 (44%), Positives = 52/78 (66%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +LE+E P +EPL+GYTSS D Q++LFF S E A YA+ +GI Y ++ + ++ Sbjct: 24 LLEYEPEKPRVVEPLMGYTSSGDMKSQIRLFFASQEEAVAYATRNGIPYRLMEPHEPKRR 83 Query: 61 ELSYQRNFSYDRLEPWTH 78 ++SY NF +DR +PWTH Sbjct: 84 KVSYSDNFRFDRPQPWTH 101 >gi|329889401|ref|ZP_08267744.1| NADH dehydrogenase ubiquinone iron-sulfur protein 4 [Brevundimonas diminuta ATCC 11568] gi|328844702|gb|EGF94266.1| NADH dehydrogenase ubiquinone iron-sulfur protein 4 [Brevundimonas diminuta ATCC 11568] Length = 101 Score = 138 bits (348), Expect = 2e-31, Method: Composition-based stats. Identities = 30/77 (38%), Positives = 44/77 (57%) Query: 2 LEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKE 61 LEFE + I+PL+G+TSS D QV+L F + E A +YA HGI + + + Sbjct: 25 LEFEPASARTIDPLMGWTSSTDMNGQVRLSFDTKEEAVEYAERHGIAFRLHEPNEAPVII 84 Query: 62 LSYQRNFSYDRLEPWTH 78 +Y NF+ +R + WTH Sbjct: 85 KAYADNFATNRKQSWTH 101 >gi|220921647|ref|YP_002496948.1| ETC complex subunit I [Methylobacterium nodulans ORS 2060] gi|219946253|gb|ACL56645.1| ETC complex I subunit conserved region [Methylobacterium nodulans ORS 2060] Length = 102 Score = 138 bits (348), Expect = 3e-31, Method: Composition-based stats. Identities = 36/78 (46%), Positives = 48/78 (61%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +LEF++ P +PL+G+TSS D LQQV+L F + E A YA+ GI Y V +K Sbjct: 25 VLEFDQTAPRETDPLMGWTSSSDMLQQVRLEFDTREEAVAYATRAGIAYRVEEPKPALRK 84 Query: 61 ELSYQRNFSYDRLEPWTH 78 +SY NF Y+R PWTH Sbjct: 85 GISYADNFKYNRSAPWTH 102 >gi|148255431|ref|YP_001240016.1| putative ETC complex I subunit region protein [Bradyrhizobium sp. BTAi1] gi|146407604|gb|ABQ36110.1| putative ETC complex I subunit conserved region protein [Bradyrhizobium sp. BTAi1] Length = 101 Score = 137 bits (347), Expect = 3e-31, Method: Composition-based stats. Identities = 35/77 (45%), Positives = 47/77 (61%) Query: 2 LEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKE 61 L++E P +EPL+G+TSS D QQV L F S E A Y GI Y VI + +++ Sbjct: 25 LDYEPELPRAVEPLMGWTSSSDMKQQVTLRFDSKEEAIAYCERKGIPYQVIEPKEPVKRQ 84 Query: 62 LSYQRNFSYDRLEPWTH 78 ++Y NFS+ R EPWTH Sbjct: 85 IAYADNFSFRRGEPWTH 101 >gi|15965469|ref|NP_385822.1| putative oxidoreductase protein [Sinorhizobium meliloti 1021] gi|307302590|ref|ZP_07582346.1| ETC complex I subunit conserved region [Sinorhizobium meliloti BL225C] gi|307318436|ref|ZP_07597870.1| ETC complex I subunit conserved region [Sinorhizobium meliloti AK83] gi|15074650|emb|CAC46295.1| Probable NADH-ubiquinone oxidoreductase [Sinorhizobium meliloti 1021] gi|306895776|gb|EFN26528.1| ETC complex I subunit conserved region [Sinorhizobium meliloti AK83] gi|306902954|gb|EFN33545.1| ETC complex I subunit conserved region [Sinorhizobium meliloti BL225C] Length = 101 Score = 137 bits (347), Expect = 3e-31, Method: Composition-based stats. Identities = 38/78 (48%), Positives = 54/78 (69%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +LEF++ P I+P++GYTSS DT QQV+L F S E A YA +GI+Y VI ++K Sbjct: 24 VLEFDQERPRTIDPIMGYTSSADTRQQVRLTFESAEQAIAYAERNGIEYRVIAPKDAARK 83 Query: 61 ELSYQRNFSYDRLEPWTH 78 +SY NF ++R++PWTH Sbjct: 84 NVSYSDNFRFNRMQPWTH 101 >gi|153009896|ref|YP_001371111.1| ETC complex I subunit region [Ochrobactrum anthropi ATCC 49188] gi|151561784|gb|ABS15282.1| ETC complex I subunit conserved region [Ochrobactrum anthropi ATCC 49188] Length = 101 Score = 137 bits (347), Expect = 4e-31, Method: Composition-based stats. Identities = 34/78 (43%), Positives = 50/78 (64%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +LE+E +P +EPL+GYTSS D Q++LFF + E A YA +GI Y + + ++ Sbjct: 24 LLEYEPESPRMVEPLMGYTSSGDMKSQIRLFFATQEEAVDYAKRNGIAYRITEPNEPKRR 83 Query: 61 ELSYQRNFSYDRLEPWTH 78 ++SY NF +DR PWTH Sbjct: 84 KVSYSDNFRFDRTMPWTH 101 >gi|150396660|ref|YP_001327127.1| ETC complex I subunit region [Sinorhizobium medicae WSM419] gi|150028175|gb|ABR60292.1| ETC complex I subunit conserved region [Sinorhizobium medicae WSM419] Length = 101 Score = 137 bits (347), Expect = 4e-31, Method: Composition-based stats. Identities = 38/78 (48%), Positives = 53/78 (67%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +LEF++ P I+P++GYTSS DT QQV+L F S E A YA +GI+Y VI ++K Sbjct: 24 VLEFDQERPRTIDPIMGYTSSADTRQQVRLTFESAEQAIAYAERNGIEYRVIAPKDAARK 83 Query: 61 ELSYQRNFSYDRLEPWTH 78 +SY NF ++R +PWTH Sbjct: 84 NVSYSDNFRFNRTQPWTH 101 >gi|254417718|ref|ZP_05031442.1| ETC complex I subunit conserved region superfamily [Brevundimonas sp. BAL3] gi|196183895|gb|EDX78871.1| ETC complex I subunit conserved region superfamily [Brevundimonas sp. BAL3] Length = 101 Score = 137 bits (347), Expect = 4e-31, Method: Composition-based stats. Identities = 31/77 (40%), Positives = 44/77 (57%) Query: 2 LEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKE 61 LEFE + ++PL+G+TSS D QV+L F S E A YA HGI + + + Sbjct: 25 LEFEPASARSLDPLMGWTSSSDMNGQVRLAFDSKEEAVAYAERHGIPFRLHEPNEPPTIL 84 Query: 62 LSYQRNFSYDRLEPWTH 78 +Y NF+ +R +PWTH Sbjct: 85 KAYADNFAPNRKQPWTH 101 >gi|306843681|ref|ZP_07476281.1| ETC complex I subunit conserved region [Brucella sp. BO1] gi|306275991|gb|EFM57700.1| ETC complex I subunit conserved region [Brucella sp. BO1] Length = 101 Score = 137 bits (347), Expect = 4e-31, Method: Composition-based stats. Identities = 34/78 (43%), Positives = 51/78 (65%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +LE+E P +EPL+GYTSS D Q++LFF S E A YA+ +GI Y ++ + ++ Sbjct: 24 LLEYEPEKPRVVEPLMGYTSSGDMKSQIRLFFASQEEAVAYATRNGIPYRLMEPHEPKRR 83 Query: 61 ELSYQRNFSYDRLEPWTH 78 ++SY NF + R +PWTH Sbjct: 84 KVSYSDNFRFGRPQPWTH 101 >gi|323136404|ref|ZP_08071486.1| ETC complex I subunit conserved region [Methylocystis sp. ATCC 49242] gi|322398478|gb|EFY00998.1| ETC complex I subunit conserved region [Methylocystis sp. ATCC 49242] Length = 103 Score = 137 bits (346), Expect = 4e-31, Method: Composition-based stats. Identities = 32/79 (40%), Positives = 46/79 (58%), Gaps = 2/79 (2%) Query: 2 LEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCK--ESQ 59 L+F+ +P I+PL+G+TSS D QQV+L F + E A YA +GI Y V + ++ Sbjct: 25 LDFDPESPRTIDPLMGWTSSGDMKQQVRLRFDTKEEAIAYAERNGIPYRVEEPKENLAAR 84 Query: 60 KELSYQRNFSYDRLEPWTH 78 + SY NF R+ WTH Sbjct: 85 RTASYSDNFKTSRIGLWTH 103 >gi|254469257|ref|ZP_05082662.1| ETC complex I subunit conserved region [Pseudovibrio sp. JE062] gi|211961092|gb|EEA96287.1| ETC complex I subunit conserved region [Pseudovibrio sp. JE062] Length = 101 Score = 137 bits (346), Expect = 5e-31, Method: Composition-based stats. Identities = 41/78 (52%), Positives = 49/78 (62%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +LEF+ +P I+PL+GYTSS D QQVKL F S E A YAS + IQY V K + Sbjct: 24 VLEFDPQSPKSIDPLMGYTSSGDMKQQVKLKFSSKEEAVAYASRNNIQYRVDEEAKRKHR 83 Query: 61 ELSYQRNFSYDRLEPWTH 78 SY NF +DRL PWTH Sbjct: 84 RASYSDNFRFDRLSPWTH 101 >gi|295689098|ref|YP_003592791.1| ETC complex I subunit [Caulobacter segnis ATCC 21756] gi|295431001|gb|ADG10173.1| ETC complex I subunit conserved region [Caulobacter segnis ATCC 21756] Length = 101 Score = 137 bits (346), Expect = 5e-31, Method: Composition-based stats. Identities = 26/78 (33%), Positives = 42/78 (53%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +LEFE + +PL+G+T S D Q++L F + + A YA H I + + + Sbjct: 24 VLEFEPASARKPDPLMGWTQSSDMNGQIRLTFDTRDEAVAYAQRHEIAFQLFEPKTPKRI 83 Query: 61 ELSYQRNFSYDRLEPWTH 78 +Y NF+ +R +PWTH Sbjct: 84 IKAYADNFAANRKQPWTH 101 >gi|86750052|ref|YP_486548.1| ETC complex I subunit region [Rhodopseudomonas palustris HaA2] gi|86573080|gb|ABD07637.1| ETC complex I subunit conserved region [Rhodopseudomonas palustris HaA2] Length = 101 Score = 137 bits (346), Expect = 5e-31, Method: Composition-based stats. Identities = 33/77 (42%), Positives = 45/77 (58%) Query: 2 LEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKE 61 L++E P IEPL+G+TSS D QQ+ L F S E A Y GI Y V+ + ++ Sbjct: 25 LDYEPEQPRMIEPLMGWTSSTDMQQQISLRFHSREEAIAYCEREGIPYQVLEPKEPVRRR 84 Query: 62 LSYQRNFSYDRLEPWTH 78 +Y NF++ R EPWTH Sbjct: 85 AAYADNFAFRRGEPWTH 101 >gi|85717211|ref|ZP_01048168.1| ETC complex I subunit conserved region protein [Nitrobacter sp. Nb-311A] gi|85695991|gb|EAQ33892.1| ETC complex I subunit conserved region protein [Nitrobacter sp. Nb-311A] Length = 101 Score = 137 bits (345), Expect = 7e-31, Method: Composition-based stats. Identities = 32/77 (41%), Positives = 44/77 (57%) Query: 2 LEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKE 61 L++E IEPL+G+TSS D QQ+ L F + E A Y GI Y VI ++ Sbjct: 25 LDYEPEQARVIEPLMGWTSSGDMKQQITLRFETREDAIAYCEREGIPYQVIEPKVTVPRK 84 Query: 62 LSYQRNFSYDRLEPWTH 78 +Y NF++ R+EPWTH Sbjct: 85 AAYADNFAFRRIEPWTH 101 >gi|170738783|ref|YP_001767438.1| ETC complex I subunit region [Methylobacterium sp. 4-46] gi|168193057|gb|ACA15004.1| ETC complex I subunit conserved region [Methylobacterium sp. 4-46] Length = 102 Score = 136 bits (344), Expect = 7e-31, Method: Composition-based stats. Identities = 36/78 (46%), Positives = 48/78 (61%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +LEF++ P +PL+G+TSS D LQQV+L F + E A YA+ GI Y + +K Sbjct: 25 VLEFDQTAPRETDPLMGWTSSSDMLQQVRLEFDTREEAVAYATREGIAYRLEEPKPLLRK 84 Query: 61 ELSYQRNFSYDRLEPWTH 78 LSY NF Y+R PWTH Sbjct: 85 GLSYADNFKYNRTAPWTH 102 >gi|326408743|gb|ADZ65808.1| ETC complex I subunit conserved region [Brucella melitensis M28] gi|326538463|gb|ADZ86678.1| ETC complex I subunit conserved protein [Brucella melitensis M5-90] Length = 89 Score = 136 bits (344), Expect = 8e-31, Method: Composition-based stats. Identities = 34/78 (43%), Positives = 51/78 (65%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +LE+E P +EPL+GYTSS D Q++LFF S E A YA+ + I Y ++ + ++ Sbjct: 12 LLEYEPEKPRVVEPLMGYTSSGDMKSQIRLFFASQEEAVAYATRNDIPYRLMEPHEPKRR 71 Query: 61 ELSYQRNFSYDRLEPWTH 78 ++SY NF +DR +PWTH Sbjct: 72 KVSYSDNFRFDRPQPWTH 89 >gi|163930881|pdb|2JYA|A Chain A, Nmr Solution Structure Of Protein Atu1810 From Agrobacterium Tumefaciens. Northeast Structural Genomics Consortium Target Atr23, Ontario Centre For Structural Proteomics Target Atc1776 Length = 106 Score = 136 bits (344), Expect = 9e-31, Method: Composition-based stats. Identities = 38/78 (48%), Positives = 52/78 (66%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +LEF+ P I+P++GYTSS D QQVKL F + E AE YA GI+Y VI + ++K Sbjct: 27 VLEFDAEVPRKIDPIMGYTSSSDMKQQVKLTFETQEQAEAYAQRKGIEYRVILPKEATRK 86 Query: 61 ELSYQRNFSYDRLEPWTH 78 +SY NF ++R +PWTH Sbjct: 87 VVSYTDNFRFNRTQPWTH 104 >gi|16125638|ref|NP_420202.1| NADH-ubiquinone oxidoreductase-like protein [Caulobacter crescentus CB15] gi|221234390|ref|YP_002516826.1| electron transport complex I subunit NADH-ubiquinone oxidoreductase [Caulobacter crescentus NA1000] gi|13422746|gb|AAK23370.1| NADH-ubiquinone oxidoreductase-related protein [Caulobacter crescentus CB15] gi|220963562|gb|ACL94918.1| electron transport complex I subunit, NADH-ubiquinone oxidoreductase [Caulobacter crescentus NA1000] Length = 101 Score = 136 bits (343), Expect = 1e-30, Method: Composition-based stats. Identities = 26/78 (33%), Positives = 43/78 (55%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +LEFE + +PL+G+T+S D Q++L F + + A YA H I + + + Sbjct: 24 VLEFEPASARKPDPLMGWTTSSDMNGQIRLTFETRDEAVAYAQRHEIAFQLFEPKAPKRI 83 Query: 61 ELSYQRNFSYDRLEPWTH 78 +Y NF+ +R +PWTH Sbjct: 84 LKAYADNFAANRKQPWTH 101 >gi|222148688|ref|YP_002549645.1| hypothetical protein Avi_2288 [Agrobacterium vitis S4] gi|221735674|gb|ACM36637.1| conserved hypothetical protein [Agrobacterium vitis S4] Length = 101 Score = 136 bits (343), Expect = 1e-30, Method: Composition-based stats. Identities = 39/78 (50%), Positives = 52/78 (66%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +LEF+ P I+P++GYTSS D LQQVKL F + E AE YA +GI Y VI + ++ Sbjct: 24 VLEFDASEPRTIDPMMGYTSSGDMLQQVKLTFETQELAEAYAQRNGIDYRVIQPKEPRRQ 83 Query: 61 ELSYQRNFSYDRLEPWTH 78 +SY NF + RL+PWTH Sbjct: 84 SVSYTDNFRFSRLQPWTH 101 >gi|17987514|ref|NP_540148.1| NADH-ubiquinone oxidoreductase 18 KD subunit [Brucella melitensis bv. 1 str. 16M] gi|23501608|ref|NP_697735.1| oxidoreductase [Brucella suis 1330] gi|62289680|ref|YP_221473.1| oxidoreductase [Brucella abortus bv. 1 str. 9-941] gi|82699607|ref|YP_414181.1| ETC complex I subunit region [Brucella melitensis biovar Abortus 2308] gi|148560468|ref|YP_001258701.1| putative oxidoreductase [Brucella ovis ATCC 25840] gi|161618691|ref|YP_001592578.1| NADH-ubiquinone oxidoreductase [Brucella canis ATCC 23365] gi|163842993|ref|YP_001627397.1| NADH-ubiquinone oxidoreductase 18 kDa subunit [Brucella suis ATCC 23445] gi|189023930|ref|YP_001934698.1| ETC complex I subunit conserved region [Brucella abortus S19] gi|225627217|ref|ZP_03785255.1| ETC complex I subunit conserved protein [Brucella ceti str. Cudo] gi|225852240|ref|YP_002732473.1| ETC complex I subunit conserved protein [Brucella melitensis ATCC 23457] gi|237815171|ref|ZP_04594169.1| ETC complex I subunit conserved region [Brucella abortus str. 2308 A] gi|254688989|ref|ZP_05152243.1| ETC complex I subunit conserved protein [Brucella abortus bv. 6 str. 870] gi|254693471|ref|ZP_05155299.1| ETC complex I subunit conserved protein [Brucella abortus bv. 3 str. Tulya] gi|254697123|ref|ZP_05158951.1| ETC complex I subunit conserved protein [Brucella abortus bv. 2 str. 86/8/59] gi|254701501|ref|ZP_05163329.1| ETC complex I subunit conserved protein [Brucella suis bv. 5 str. 513] gi|254704048|ref|ZP_05165876.1| ETC complex I subunit conserved protein [Brucella suis bv. 3 str. 686] gi|254709840|ref|ZP_05171651.1| ETC complex I subunit conserved protein [Brucella pinnipedialis B2/94] gi|254713842|ref|ZP_05175653.1| ETC complex I subunit conserved protein [Brucella ceti M644/93/1] gi|254717101|ref|ZP_05178912.1| ETC complex I subunit conserved protein [Brucella ceti M13/05/1] gi|254730019|ref|ZP_05188597.1| ETC complex I subunit conserved protein [Brucella abortus bv. 4 str. 292] gi|256031331|ref|ZP_05444945.1| ETC complex I subunit conserved protein [Brucella pinnipedialis M292/94/1] gi|256044412|ref|ZP_05447316.1| ETC complex I subunit conserved protein [Brucella melitensis bv. 1 str. Rev.1] gi|256060843|ref|ZP_05451003.1| ETC complex I subunit conserved protein [Brucella neotomae 5K33] gi|256113255|ref|ZP_05454123.1| ETC complex I subunit conserved protein [Brucella melitensis bv. 3 str. Ether] gi|256159450|ref|ZP_05457222.1| ETC complex I subunit conserved protein [Brucella ceti M490/95/1] gi|256254739|ref|ZP_05460275.1| ETC complex I subunit conserved protein [Brucella ceti B1/94] gi|256257237|ref|ZP_05462773.1| ETC complex I subunit conserved protein [Brucella abortus bv. 9 str. C68] gi|256264253|ref|ZP_05466785.1| ETC complex subunit I [Brucella melitensis bv. 2 str. 63/9] gi|256369155|ref|YP_003106663.1| oxidoreductase, putative [Brucella microti CCM 4915] gi|260168468|ref|ZP_05755279.1| oxidoreductase, putative [Brucella sp. F5/99] gi|260545568|ref|ZP_05821309.1| ETC complex I subunit region [Brucella abortus NCTC 8038] gi|260563764|ref|ZP_05834250.1| ETC complex I subunit region [Brucella melitensis bv. 1 str. 16M] gi|260566704|ref|ZP_05837174.1| ETC complex I subunit region [Brucella suis bv. 4 str. 40] gi|260754481|ref|ZP_05866829.1| ETC complex I subunit region [Brucella abortus bv. 6 str. 870] gi|260757701|ref|ZP_05870049.1| ETC complex I subunit [Brucella abortus bv. 4 str. 292] gi|260761527|ref|ZP_05873870.1| ETC complex I subunit region [Brucella abortus bv. 2 str. 86/8/59] gi|260883509|ref|ZP_05895123.1| ETC complex subunit I [Brucella abortus bv. 9 str. C68] gi|261213728|ref|ZP_05928009.1| biopolymer transporter ExbB [Brucella abortus bv. 3 str. Tulya] gi|261218912|ref|ZP_05933193.1| ETC complex I subunit region [Brucella ceti M13/05/1] gi|261221920|ref|ZP_05936201.1| ETC complex subunit I [Brucella ceti B1/94] gi|261317380|ref|ZP_05956577.1| ETC complex I subunit region [Brucella pinnipedialis B2/94] gi|261321589|ref|ZP_05960786.1| ETC complex I subunit region [Brucella ceti M644/93/1] gi|261324837|ref|ZP_05964034.1| ETC complex subunit I [Brucella neotomae 5K33] gi|261752047|ref|ZP_05995756.1| ETC complex I subunit region [Brucella suis bv. 5 str. 513] gi|261754706|ref|ZP_05998415.1| ETC complex I subunit region [Brucella suis bv. 3 str. 686] gi|261757934|ref|ZP_06001643.1| ETC complex I subunit region [Brucella sp. F5/99] gi|265988417|ref|ZP_06100974.1| ETC complex subunit I [Brucella pinnipedialis M292/94/1] gi|265990832|ref|ZP_06103389.1| ETC complex subunit I [Brucella melitensis bv. 1 str. Rev.1] gi|265994667|ref|ZP_06107224.1| ETC complex subunit I [Brucella melitensis bv. 3 str. Ether] gi|265997883|ref|ZP_06110440.1| ETC complex subunit I [Brucella ceti M490/95/1] gi|294852080|ref|ZP_06792753.1| NADH-ubiquinone oxidoreductase 18 kDa subunit [Brucella sp. NVSL 07-0026] gi|297248087|ref|ZP_06931805.1| NADH-ubiquinone oxidoreductase 18 kDa subunit [Brucella abortus bv. 5 str. B3196] gi|17983214|gb|AAL52412.1| NADH-ubiquinone oxidoreductase 18 kd subunit [Brucella melitensis bv. 1 str. 16M] gi|23347524|gb|AAN29650.1| oxidoreductase, putative [Brucella suis 1330] gi|62195812|gb|AAX74112.1| oxidoreductase, hypothetical [Brucella abortus bv. 1 str. 9-941] gi|82615708|emb|CAJ10695.1| ETC complex I subunit conserved region [Brucella melitensis biovar Abortus 2308] gi|148371725|gb|ABQ61704.1| putative oxidoreductase [Brucella ovis ATCC 25840] gi|161335502|gb|ABX61807.1| NADH-ubiquinone oxidoreductase [Brucella canis ATCC 23365] gi|163673716|gb|ABY37827.1| NADH-ubiquinone oxidoreductase 18 kDa subunit [Brucella suis ATCC 23445] gi|189019502|gb|ACD72224.1| ETC complex I subunit conserved region [Brucella abortus S19] gi|225618052|gb|EEH15096.1| ETC complex I subunit conserved protein [Brucella ceti str. Cudo] gi|225640605|gb|ACO00519.1| ETC complex I subunit conserved protein [Brucella melitensis ATCC 23457] gi|237790008|gb|EEP64218.1| ETC complex I subunit conserved region [Brucella abortus str. 2308 A] gi|255999315|gb|ACU47714.1| oxidoreductase, putative [Brucella microti CCM 4915] gi|260096975|gb|EEW80850.1| ETC complex I subunit region [Brucella abortus NCTC 8038] gi|260153780|gb|EEW88872.1| ETC complex I subunit region [Brucella melitensis bv. 1 str. 16M] gi|260156222|gb|EEW91302.1| ETC complex I subunit region [Brucella suis bv. 4 str. 40] gi|260668019|gb|EEX54959.1| ETC complex I subunit [Brucella abortus bv. 4 str. 292] gi|260671959|gb|EEX58780.1| ETC complex I subunit region [Brucella abortus bv. 2 str. 86/8/59] gi|260674589|gb|EEX61410.1| ETC complex I subunit region [Brucella abortus bv. 6 str. 870] gi|260873037|gb|EEX80106.1| ETC complex subunit I [Brucella abortus bv. 9 str. C68] gi|260915335|gb|EEX82196.1| biopolymer transporter ExbB [Brucella abortus bv. 3 str. Tulya] gi|260920504|gb|EEX87157.1| ETC complex subunit I [Brucella ceti B1/94] gi|260924001|gb|EEX90569.1| ETC complex I subunit region [Brucella ceti M13/05/1] gi|261294279|gb|EEX97775.1| ETC complex I subunit region [Brucella ceti M644/93/1] gi|261296603|gb|EEY00100.1| ETC complex I subunit region [Brucella pinnipedialis B2/94] gi|261300817|gb|EEY04314.1| ETC complex subunit I [Brucella neotomae 5K33] gi|261737918|gb|EEY25914.1| ETC complex I subunit region [Brucella sp. F5/99] gi|261741800|gb|EEY29726.1| ETC complex I subunit region [Brucella suis bv. 5 str. 513] gi|261744459|gb|EEY32385.1| ETC complex I subunit region [Brucella suis bv. 3 str. 686] gi|262552351|gb|EEZ08341.1| ETC complex subunit I [Brucella ceti M490/95/1] gi|262765780|gb|EEZ11569.1| ETC complex subunit I [Brucella melitensis bv. 3 str. Ether] gi|263001616|gb|EEZ14191.1| ETC complex subunit I [Brucella melitensis bv. 1 str. Rev.1] gi|263094512|gb|EEZ18321.1| ETC complex subunit I [Brucella melitensis bv. 2 str. 63/9] gi|264660614|gb|EEZ30875.1| ETC complex subunit I [Brucella pinnipedialis M292/94/1] gi|294820669|gb|EFG37668.1| NADH-ubiquinone oxidoreductase 18 kDa subunit [Brucella sp. NVSL 07-0026] gi|297175256|gb|EFH34603.1| NADH-ubiquinone oxidoreductase 18 kDa subunit [Brucella abortus bv. 5 str. B3196] Length = 101 Score = 135 bits (342), Expect = 1e-30, Method: Composition-based stats. Identities = 34/78 (43%), Positives = 51/78 (65%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +LE+E P +EPL+GYTSS D Q++LFF S E A YA+ + I Y ++ + ++ Sbjct: 24 LLEYEPEKPRVVEPLMGYTSSGDMKSQIRLFFASQEEAVAYATRNDIPYRLMEPHEPKRR 83 Query: 61 ELSYQRNFSYDRLEPWTH 78 ++SY NF +DR +PWTH Sbjct: 84 KVSYSDNFRFDRPQPWTH 101 >gi|254466824|ref|ZP_05080235.1| ETC complex I subunit conserved region [Rhodobacterales bacterium Y4I] gi|206687732|gb|EDZ48214.1| ETC complex I subunit conserved region [Rhodobacterales bacterium Y4I] Length = 103 Score = 135 bits (342), Expect = 1e-30, Method: Composition-based stats. Identities = 35/80 (43%), Positives = 48/80 (60%), Gaps = 2/80 (2%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKES-- 58 +LEF + ++PL+G+TSS DT QVKL F S EAA +YA DHGI+ V+ + Sbjct: 24 VLEFAPASAREVDPLMGWTSSSDTQSQVKLRFDSKEAALEYAKDHGIEALVVEPKQRKAN 83 Query: 59 QKELSYQRNFSYDRLEPWTH 78 + Y NF+ +R PWTH Sbjct: 84 IRPGGYGDNFATNRRGPWTH 103 >gi|260463358|ref|ZP_05811559.1| ETC complex I subunit conserved region [Mesorhizobium opportunistum WSM2075] gi|259030948|gb|EEW32223.1| ETC complex I subunit conserved region [Mesorhizobium opportunistum WSM2075] Length = 101 Score = 135 bits (342), Expect = 1e-30, Method: Composition-based stats. Identities = 31/78 (39%), Positives = 46/78 (58%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +LEF+ I+PL+GYT+S D Q++L F + E A YA G+ + V + ++ Sbjct: 24 VLEFDPEMRKKIDPLMGYTTSGDMRSQIRLTFDTREEAVAYAEKEGLAFRVEEPKEAKRR 83 Query: 61 ELSYQRNFSYDRLEPWTH 78 ++SY NF YDR PWTH Sbjct: 84 QISYAENFRYDRRTPWTH 101 >gi|260431430|ref|ZP_05785401.1| NADH-ubiquinone oxidoreductase family protein [Silicibacter lacuscaerulensis ITI-1157] gi|260415258|gb|EEX08517.1| NADH-ubiquinone oxidoreductase family protein [Silicibacter lacuscaerulensis ITI-1157] Length = 103 Score = 135 bits (342), Expect = 1e-30, Method: Composition-based stats. Identities = 33/80 (41%), Positives = 45/80 (56%), Gaps = 2/80 (2%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQ- 59 +LEF + ++PL+G+TSS DT QV+L F + E A YA +HGI V+ K Sbjct: 24 VLEFAPASAREVDPLMGWTSSSDTQTQVRLRFDTKEEALHYAREHGIDAQVVEPHKRKPN 83 Query: 60 -KELSYQRNFSYDRLEPWTH 78 + Y NF+ DR PWTH Sbjct: 84 IRPRGYGENFATDRRGPWTH 103 >gi|319784357|ref|YP_004143833.1| ETC complex I subunit conserved region [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317170245|gb|ADV13783.1| ETC complex I subunit conserved region [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 101 Score = 135 bits (342), Expect = 2e-30, Method: Composition-based stats. Identities = 31/78 (39%), Positives = 47/78 (60%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +LEF+ + I+PL+GYT+S D Q++L F + E A YA G+ + V + ++ Sbjct: 24 VLEFDPESRKKIDPLMGYTTSADMRSQIRLSFDTREEAVAYAEKQGLAFRVEEPKETKRR 83 Query: 61 ELSYQRNFSYDRLEPWTH 78 ++SY NF YDR PWTH Sbjct: 84 QISYAENFRYDRRTPWTH 101 >gi|209885171|ref|YP_002289028.1| NADH dehydrogenase [Oligotropha carboxidovorans OM5] gi|209873367|gb|ACI93163.1| NADH dehydrogenase [Oligotropha carboxidovorans OM5] Length = 101 Score = 135 bits (341), Expect = 2e-30, Method: Composition-based stats. Identities = 33/77 (42%), Positives = 45/77 (58%) Query: 2 LEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKE 61 L+FE P +EPL+G+TSS D QQV L F + E A Y +GI Y V ++ Sbjct: 25 LDFEPEVPRVVEPLMGWTSSSDMKQQVSLHFVTKEEAIAYCEANGIAYEVAEPKDSIRRR 84 Query: 62 LSYQRNFSYDRLEPWTH 78 ++Y NF++ R EPWTH Sbjct: 85 VAYADNFAFRRSEPWTH 101 >gi|299133824|ref|ZP_07027018.1| ETC complex I subunit conserved region [Afipia sp. 1NLS2] gi|298591660|gb|EFI51861.1| ETC complex I subunit conserved region [Afipia sp. 1NLS2] Length = 101 Score = 135 bits (341), Expect = 2e-30, Method: Composition-based stats. Identities = 32/77 (41%), Positives = 47/77 (61%) Query: 2 LEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKE 61 L++E P +EPL+G+TSS D QQV L F + E A Y +GI Y V + +++ Sbjct: 25 LDYEPEKPRVVEPLMGWTSSADMKQQVTLHFHTREEAVAYCEANGIAYQVQEPKESVRRQ 84 Query: 62 LSYQRNFSYDRLEPWTH 78 ++Y NF++ R EPWTH Sbjct: 85 VAYADNFAFRRSEPWTH 101 >gi|15889112|ref|NP_354793.1| hypothetical protein Atu1810 [Agrobacterium tumefaciens str. C58] gi|15156918|gb|AAK87578.1| conserved hypothetical protein [Agrobacterium tumefaciens str. C58] Length = 101 Score = 135 bits (341), Expect = 2e-30, Method: Composition-based stats. Identities = 38/78 (48%), Positives = 52/78 (66%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +LEF+ P I+P++GYTSS D QQVKL F + E AE YA GI+Y VI + ++K Sbjct: 24 VLEFDAEVPRKIDPIMGYTSSSDMKQQVKLTFETQEQAEAYAQRKGIEYRVILPKEATRK 83 Query: 61 ELSYQRNFSYDRLEPWTH 78 +SY NF ++R +PWTH Sbjct: 84 VVSYTDNFRFNRTQPWTH 101 >gi|75675798|ref|YP_318219.1| ETC complex I subunit region [Nitrobacter winogradskyi Nb-255] gi|74420668|gb|ABA04867.1| ETC complex I subunit conserved region [Nitrobacter winogradskyi Nb-255] Length = 115 Score = 135 bits (340), Expect = 2e-30, Method: Composition-based stats. Identities = 34/77 (44%), Positives = 47/77 (61%) Query: 2 LEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKE 61 L++E P IEPL+G+TSS DT QQ+ L F + E A Y GI Y VI + ++ Sbjct: 39 LDYEPEQPRAIEPLMGWTSSGDTKQQITLRFETREDAIAYCEREGIPYQVIEPKGRATRK 98 Query: 62 LSYQRNFSYDRLEPWTH 78 +Y NF++ R+EPWTH Sbjct: 99 AAYSDNFAFRRIEPWTH 115 >gi|325293214|ref|YP_004279078.1| NADH-ubiquinone oxidoreductase protein [Agrobacterium sp. H13-3] gi|325061067|gb|ADY64758.1| NADH-ubiquinone oxidoreductase protein [Agrobacterium sp. H13-3] Length = 101 Score = 135 bits (340), Expect = 2e-30, Method: Composition-based stats. Identities = 37/78 (47%), Positives = 52/78 (66%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +LEF+ P I+P++GYTS+ D QQVKL F + E AE YA GI+Y VI + ++K Sbjct: 24 VLEFDAEVPRKIDPIMGYTSTSDMKQQVKLTFETQEQAEAYAQRKGIEYRVIQPKEATRK 83 Query: 61 ELSYQRNFSYDRLEPWTH 78 +SY NF ++R +PWTH Sbjct: 84 VVSYTDNFRFNRTQPWTH 101 >gi|114707698|ref|ZP_01440593.1| ETC complex I subunit conserved region [Fulvimarina pelagi HTCC2506] gi|114536942|gb|EAU40071.1| ETC complex I subunit conserved region [Fulvimarina pelagi HTCC2506] Length = 101 Score = 134 bits (339), Expect = 3e-30, Method: Composition-based stats. Identities = 33/78 (42%), Positives = 47/78 (60%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +L +E P I+PL+GYTSS D L Q++L F + E A +YA + I Y V + + Sbjct: 24 LLIYEPQEPKRIDPLMGYTSSGDMLSQLRLSFETREQAVEYAERNDIPYRVEEPKETKRV 83 Query: 61 ELSYQRNFSYDRLEPWTH 78 ++Y NF YDR +PWTH Sbjct: 84 RVAYADNFKYDRRQPWTH 101 >gi|154248102|ref|YP_001419060.1| ETC complex I subunit region [Xanthobacter autotrophicus Py2] gi|154162187|gb|ABS69403.1| ETC complex I subunit conserved region [Xanthobacter autotrophicus Py2] Length = 101 Score = 134 bits (339), Expect = 3e-30, Method: Composition-based stats. Identities = 29/78 (37%), Positives = 45/78 (57%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +LE+E +EPL+GYTSS D Q++L F + E A YA GI + V + ++ Sbjct: 24 VLEYEPEHARMVEPLMGYTSSADMRSQIRLKFETKEEAVAYAQKRGIPFQVFEPHETGRR 83 Query: 61 ELSYQRNFSYDRLEPWTH 78 ++Y NF++ R+ WTH Sbjct: 84 RMAYSDNFAFTRVGQWTH 101 >gi|316934262|ref|YP_004109244.1| ETC complex subunit I conserved region protein [Rhodopseudomonas palustris DX-1] gi|315601976|gb|ADU44511.1| ETC complex I subunit conserved region protein [Rhodopseudomonas palustris DX-1] Length = 101 Score = 134 bits (338), Expect = 4e-30, Method: Composition-based stats. Identities = 33/77 (42%), Positives = 46/77 (59%) Query: 2 LEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKE 61 L++E P IEPL+G+TSS D QQV L F + + A Y GI Y VI + +++ Sbjct: 25 LDYEPEKPRTIEPLMGWTSSSDMHQQVSLRFHTRDEAVAYCEREGIPYQVIEPKEPARRR 84 Query: 62 LSYQRNFSYDRLEPWTH 78 +Y NF++ R EPWTH Sbjct: 85 AAYADNFAFRRPEPWTH 101 >gi|39935603|ref|NP_947879.1| ETC complex I subunit region [Rhodopseudomonas palustris CGA009] gi|39649456|emb|CAE27978.1| possible NADH dehydrogenase (ubiquinone) Fe-S protein 4 (18kD) (NADH-coenzyme Q reductase) [Rhodopseudomonas palustris CGA009] Length = 101 Score = 134 bits (338), Expect = 4e-30, Method: Composition-based stats. Identities = 33/77 (42%), Positives = 46/77 (59%) Query: 2 LEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKE 61 L++E TP IEPL+G+TSS D QQV L F + + A Y GI Y +I + ++ Sbjct: 25 LDYEPETPRTIEPLMGWTSSSDMQQQVSLRFHTRDEAVAYCEREGIPYQLIEPKEPVRRR 84 Query: 62 LSYQRNFSYDRLEPWTH 78 +Y NF++ R EPWTH Sbjct: 85 AAYADNFAFRRPEPWTH 101 >gi|110633453|ref|YP_673661.1| ETC complex I subunit region [Mesorhizobium sp. BNC1] gi|110284437|gb|ABG62496.1| ETC complex I subunit conserved region [Chelativorans sp. BNC1] Length = 101 Score = 134 bits (338), Expect = 4e-30, Method: Composition-based stats. Identities = 40/78 (51%), Positives = 51/78 (65%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +LEFE TP I+PL+GYTSS DT +QV+L F + E A YA +GI Y V P ++ Sbjct: 24 VLEFEPETPLKIDPLMGYTSSSDTRRQVRLSFATEEEAIAYAQRNGIAYQVEPEKPVHRR 83 Query: 61 ELSYQRNFSYDRLEPWTH 78 ++SY NF YDR PWTH Sbjct: 84 QVSYAENFRYDRKIPWTH 101 >gi|115524919|ref|YP_781830.1| ETC complex I subunit region [Rhodopseudomonas palustris BisA53] gi|115518866|gb|ABJ06850.1| ETC complex I subunit conserved region [Rhodopseudomonas palustris BisA53] Length = 111 Score = 134 bits (338), Expect = 5e-30, Method: Composition-based stats. Identities = 33/77 (42%), Positives = 46/77 (59%) Query: 2 LEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKE 61 L++E P IEPL+G+TSS D QQ+ L F + E A Y GI Y VI + +++ Sbjct: 35 LDYEPAQPRVIEPLMGWTSSTDMRQQLTLKFHTREEAIAYCEREGIAYQVIEPKESARRR 94 Query: 62 LSYQRNFSYDRLEPWTH 78 +Y NF++ R EPWTH Sbjct: 95 AAYSDNFAFRRTEPWTH 111 >gi|86140158|ref|ZP_01058720.1| NADH-ubiquinone oxidoreductase family protein [Roseobacter sp. MED193] gi|85823095|gb|EAQ43308.1| NADH-ubiquinone oxidoreductase family protein [Roseobacter sp. MED193] Length = 91 Score = 134 bits (337), Expect = 5e-30, Method: Composition-based stats. Identities = 32/80 (40%), Positives = 47/80 (58%), Gaps = 2/80 (2%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKES-- 58 +L++ + + ++PL+G+TSS DT QV+L F S EAA +YA DHGI V+ Sbjct: 12 VLDYAQASAREVDPLMGWTSSSDTQSQVRLRFDSKEAALEYAQDHGIDAEVVEPKPRKAN 71 Query: 59 QKELSYQRNFSYDRLEPWTH 78 + Y NF+ +R PWTH Sbjct: 72 LRPGGYGENFATNRRVPWTH 91 >gi|315499878|ref|YP_004088681.1| etc complex i subunit conserved region [Asticcacaulis excentricus CB 48] gi|315417890|gb|ADU14530.1| ETC complex I subunit conserved region [Asticcacaulis excentricus CB 48] Length = 101 Score = 134 bits (337), Expect = 5e-30, Method: Composition-based stats. Identities = 29/78 (37%), Positives = 44/78 (56%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +LEFE + +PL+G+ S+ DT QV+L F + E A YA HGI + +I + Sbjct: 24 VLEFEPASARTPDPLMGWISAADTRTQVRLSFDTKEQAMAYAETHGIPFRLIEPETPPKI 83 Query: 61 ELSYQRNFSYDRLEPWTH 78 +Y NF+ +R + WTH Sbjct: 84 IKAYADNFASNRRQSWTH 101 >gi|56695396|ref|YP_165744.1| NADH-ubiquinone oxidoreductase family protein [Ruegeria pomeroyi DSS-3] gi|56677133|gb|AAV93799.1| NADH-ubiquinone oxidoreductase family protein [Ruegeria pomeroyi DSS-3] Length = 103 Score = 134 bits (337), Expect = 5e-30, Method: Composition-based stats. Identities = 33/80 (41%), Positives = 43/80 (53%), Gaps = 2/80 (2%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQ- 59 +LE+ + ++PL+G+TSS DT QV+L F S E A YA HGI V K Sbjct: 24 VLEYAPGSAREVDPLMGWTSSSDTQSQVRLRFDSKEEALDYARAHGIDAVVTEPHKRKPN 83 Query: 60 -KELSYQRNFSYDRLEPWTH 78 + Y NF+ DR PWTH Sbjct: 84 LRARGYGENFATDRRGPWTH 103 >gi|148259708|ref|YP_001233835.1| ETC complex I subunit region [Acidiphilium cryptum JF-5] gi|326403323|ref|YP_004283404.1| NADH-ubiquinone oxidoreductase family protein [Acidiphilium multivorum AIU301] gi|146401389|gb|ABQ29916.1| ETC complex I subunit conserved region [Acidiphilium cryptum JF-5] gi|325050184|dbj|BAJ80522.1| NADH-ubiquinone oxidoreductase family protein [Acidiphilium multivorum AIU301] Length = 103 Score = 134 bits (337), Expect = 5e-30, Method: Composition-based stats. Identities = 30/79 (37%), Positives = 43/79 (54%), Gaps = 1/79 (1%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTL-QQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQ 59 +LEFE I+PL+G+T S D + QV+L F + E A YA HGI + + + + Sbjct: 25 VLEFEPAMAKRIDPLMGWTGSGDMMASQVRLSFATREEAIAYAEKHGIAFDLEIPTERHR 84 Query: 60 KELSYQRNFSYDRLEPWTH 78 + +Y NF DR WTH Sbjct: 85 RPKAYADNFRADRRANWTH 103 >gi|118589020|ref|ZP_01546427.1| ETC complex I subunit conserved region protein [Stappia aggregata IAM 12614] gi|118438349|gb|EAV44983.1| ETC complex I subunit conserved region protein [Stappia aggregata IAM 12614] Length = 101 Score = 134 bits (337), Expect = 5e-30, Method: Composition-based stats. Identities = 32/78 (41%), Positives = 47/78 (60%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +L++E +EPL+GYTSS D QQ++LFF + E A YA HGI + V + + + Sbjct: 24 VLDYEPEVAKSVEPLMGYTSSSDMKQQIRLFFETSEEAVAYAKRHGIPHRVEKARERKVR 83 Query: 61 ELSYQRNFSYDRLEPWTH 78 +Y NF ++R PWTH Sbjct: 84 GSAYADNFKFNRSAPWTH 101 >gi|167646970|ref|YP_001684633.1| ETC complex subunit I region [Caulobacter sp. K31] gi|167349400|gb|ABZ72135.1| ETC complex I subunit conserved region [Caulobacter sp. K31] Length = 101 Score = 133 bits (336), Expect = 6e-30, Method: Composition-based stats. Identities = 28/78 (35%), Positives = 41/78 (52%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +LEFE + +PL+G+T S D QV+L F + E A YA H I + + + Sbjct: 24 VLEFEPASARRSDPLMGWTQSSDMNGQVRLNFETREEAIAYAQRHEISFQLFEPKTPKRI 83 Query: 61 ELSYQRNFSYDRLEPWTH 78 +Y NF+ R +PWTH Sbjct: 84 IKAYADNFAAGRRQPWTH 101 >gi|192291186|ref|YP_001991791.1| ETC complex I subunit conserved region [Rhodopseudomonas palustris TIE-1] gi|192284935|gb|ACF01316.1| ETC complex I subunit conserved region [Rhodopseudomonas palustris TIE-1] Length = 101 Score = 133 bits (336), Expect = 7e-30, Method: Composition-based stats. Identities = 33/77 (42%), Positives = 46/77 (59%) Query: 2 LEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKE 61 L++E TP IEPL+G+TSS D QQV L F + + A Y GI Y +I + ++ Sbjct: 25 LDYEPETPRTIEPLMGWTSSSDMQQQVSLRFHTRDEAVAYCEREGIPYQLIEPKESVRRR 84 Query: 62 LSYQRNFSYDRLEPWTH 78 +Y NF++ R EPWTH Sbjct: 85 AAYADNFAFRRPEPWTH 101 >gi|90424280|ref|YP_532650.1| ETC complex I subunit region [Rhodopseudomonas palustris BisB18] gi|90106294|gb|ABD88331.1| ETC complex I subunit conserved region [Rhodopseudomonas palustris BisB18] Length = 125 Score = 133 bits (336), Expect = 7e-30, Method: Composition-based stats. Identities = 34/77 (44%), Positives = 45/77 (58%) Query: 2 LEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKE 61 L++E P IEPL+G+TSS DT QQ+ L F S E A Y GI Y VI +++ Sbjct: 49 LDYEPEQPRVIEPLMGWTSSGDTRQQLTLHFHSREDAIAYCECEGIPYQVIEPKPPARRR 108 Query: 62 LSYQRNFSYDRLEPWTH 78 +Y NF++ R PWTH Sbjct: 109 AAYSDNFAFRRDMPWTH 125 >gi|254501235|ref|ZP_05113386.1| ETC complex I subunit conserved region superfamily [Labrenzia alexandrii DFL-11] gi|222437306|gb|EEE43985.1| ETC complex I subunit conserved region superfamily [Labrenzia alexandrii DFL-11] Length = 101 Score = 133 bits (335), Expect = 8e-30, Method: Composition-based stats. Identities = 35/78 (44%), Positives = 45/78 (57%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +L+FE +EPL+GYTSS D QQV++ F S E A YA GI Y V S + Sbjct: 24 VLDFEPEVAKSVEPLMGYTSSSDMKQQVRMVFESQEDAVAYAKRQGIPYRVEKSQARVVR 83 Query: 61 ELSYQRNFSYDRLEPWTH 78 +Y NF +DR+ PWTH Sbjct: 84 GAAYADNFKFDRVAPWTH 101 >gi|192973032|gb|ACF06932.1| ETC complex I subunit conserved region protein [uncultured Roseobacter sp.] Length = 103 Score = 133 bits (335), Expect = 8e-30, Method: Composition-based stats. Identities = 32/80 (40%), Positives = 45/80 (56%), Gaps = 2/80 (2%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKES-- 58 +LEF I+PL+G+TSS DT QV+L F + +AA YA HGIQ ++ K + Sbjct: 24 VLEFAHSEARRIDPLMGWTSSDDTQTQVRLQFDTKDAAVDYAERHGIQATIVEPQKRATN 83 Query: 59 QKELSYQRNFSYDRLEPWTH 78 + Y NF+ +R WTH Sbjct: 84 IRPGGYGENFATNRRGVWTH 103 >gi|209549151|ref|YP_002281068.1| ETC complex subunit I [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209534907|gb|ACI54842.1| ETC complex I subunit conserved region [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 101 Score = 133 bits (335), Expect = 9e-30, Method: Composition-based stats. Identities = 38/78 (48%), Positives = 53/78 (67%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +LEF++ +P I+P++GYTSS DT QQVKL F + E AE YA +GI+Y VI ++ Sbjct: 24 VLEFDQESPRKIDPIMGYTSSGDTRQQVKLTFETQELAEAYAQRNGIEYRVIAPKDPVRQ 83 Query: 61 ELSYQRNFSYDRLEPWTH 78 ++Y NF Y R +PWTH Sbjct: 84 VVAYPDNFRYTRTQPWTH 101 >gi|47114839|emb|CAE48344.1| unnamed protein product [Methylocystis sp. SC2] Length = 102 Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats. Identities = 32/79 (40%), Positives = 44/79 (55%), Gaps = 2/79 (2%) Query: 2 LEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCK--ESQ 59 L+FE P IEPL+G+TSS D QQV+L F + E A YA +G+ Y + ++ Sbjct: 24 LDFEPELPRSIEPLMGWTSSADMRQQVRLNFSTKEEAIAYAERNGLPYRLEEPKPNLAAR 83 Query: 60 KELSYQRNFSYDRLEPWTH 78 + SY NF R+ WTH Sbjct: 84 RGASYSDNFKTSRIGLWTH 102 >gi|163743674|ref|ZP_02151049.1| NADH-ubiquinone oxidoreductase family protein [Phaeobacter gallaeciensis 2.10] gi|161383041|gb|EDQ07435.1| NADH-ubiquinone oxidoreductase family protein [Phaeobacter gallaeciensis 2.10] Length = 103 Score = 132 bits (334), Expect = 1e-29, Method: Composition-based stats. Identities = 30/80 (37%), Positives = 44/80 (55%), Gaps = 2/80 (2%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKES-- 58 +L+F + ++PL+G+TSS DT QV+L F + EAA +YA +GI V Sbjct: 24 VLDFVPSSAREVDPLMGWTSSHDTQSQVRLRFDTKEAALEYAEANGIDAVVTEPKSRKAN 83 Query: 59 QKELSYQRNFSYDRLEPWTH 78 + Y NF+ +R PWTH Sbjct: 84 VRAGGYGENFATNRRAPWTH 103 >gi|328543610|ref|YP_004303719.1| Putative NADH-ubiquinone oxidoreductase subunit [Polymorphum gilvum SL003B-26A1] gi|326413354|gb|ADZ70417.1| Putative NADH-ubiquinone oxidoreductase subunit [Polymorphum gilvum SL003B-26A1] Length = 101 Score = 132 bits (334), Expect = 1e-29, Method: Composition-based stats. Identities = 34/78 (43%), Positives = 47/78 (60%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +L++E +EPL+GYTSS D QQ++L+F S E A YA + I Y V P+ + + Sbjct: 24 VLDYEPEIARSVEPLMGYTSSADMKQQIRLYFDSCEDAVAYARRNAIPYRVEPAKERKVR 83 Query: 61 ELSYQRNFSYDRLEPWTH 78 SY NF +DR PWTH Sbjct: 84 GASYSDNFRFDRSAPWTH 101 >gi|254707051|ref|ZP_05168879.1| ETC complex I subunit conserved protein [Brucella pinnipedialis M163/99/10] gi|261314517|ref|ZP_05953714.1| ETC complex I subunit region [Brucella pinnipedialis M163/99/10] gi|261303543|gb|EEY07040.1| ETC complex I subunit region [Brucella pinnipedialis M163/99/10] Length = 101 Score = 132 bits (334), Expect = 1e-29, Method: Composition-based stats. Identities = 34/78 (43%), Positives = 51/78 (65%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +LE+E P +EPL+GYTSS D Q++LFF S E A YA+ + I Y ++ + ++ Sbjct: 24 LLEYEPEKPRVVEPLIGYTSSGDMKSQIRLFFASQEEAVAYATRNDIPYRLMEPHEPKRR 83 Query: 61 ELSYQRNFSYDRLEPWTH 78 ++SY NF +DR +PWTH Sbjct: 84 KVSYSDNFRFDRPQPWTH 101 >gi|163736818|ref|ZP_02144236.1| NADH-ubiquinone oxidoreductase family protein [Phaeobacter gallaeciensis BS107] gi|161389422|gb|EDQ13773.1| NADH-ubiquinone oxidoreductase family protein [Phaeobacter gallaeciensis BS107] Length = 103 Score = 132 bits (333), Expect = 1e-29, Method: Composition-based stats. Identities = 31/80 (38%), Positives = 44/80 (55%), Gaps = 2/80 (2%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKES-- 58 +L+F + ++PL+G+TSS DT QV+L F S EAA +YA +GI V Sbjct: 24 VLDFVPSSAREVDPLMGWTSSHDTQSQVRLRFDSKEAALEYAEANGIDAVVTEPKSRKAN 83 Query: 59 QKELSYQRNFSYDRLEPWTH 78 + Y NF+ +R PWTH Sbjct: 84 VRAGGYGENFATNRRAPWTH 103 >gi|188582572|ref|YP_001926017.1| ETC complex I subunit conserved region [Methylobacterium populi BJ001] gi|179346070|gb|ACB81482.1| ETC complex I subunit conserved region [Methylobacterium populi BJ001] Length = 103 Score = 132 bits (333), Expect = 1e-29, Method: Composition-based stats. Identities = 35/79 (44%), Positives = 48/79 (60%), Gaps = 1/79 (1%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKE-SQ 59 +LEF++ P +PL+G+T S D LQQV+L F + E A YA GI Y V + ++ Sbjct: 25 VLEFDQTEPRETDPLMGWTGSSDMLQQVRLEFDTSEEAVAYAKAAGIAYRVEETPPPIAR 84 Query: 60 KELSYQRNFSYDRLEPWTH 78 K LSY NF ++R PWTH Sbjct: 85 KGLSYSDNFKFNRTAPWTH 103 >gi|170751808|ref|YP_001758068.1| ETC complex I subunit region [Methylobacterium radiotolerans JCM 2831] gi|170658330|gb|ACB27385.1| ETC complex I subunit conserved region [Methylobacterium radiotolerans JCM 2831] Length = 103 Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats. Identities = 35/79 (44%), Positives = 49/79 (62%), Gaps = 1/79 (1%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKES-Q 59 +LEF++ +P I+PL+G+ S D LQQV+L F + E A YA GI + V K + + Sbjct: 25 ILEFDRTSPREIDPLMGWNGSSDMLQQVRLEFDTEEEAVAYAKREGIAFRVEQPAKPAHR 84 Query: 60 KELSYQRNFSYDRLEPWTH 78 K LSY NF ++R PWTH Sbjct: 85 KGLSYSDNFKFNRTAPWTH 103 >gi|163852550|ref|YP_001640593.1| ETC complex I subunit region [Methylobacterium extorquens PA1] gi|218531387|ref|YP_002422203.1| ETC complex I subunit conserved region [Methylobacterium chloromethanicum CM4] gi|240139884|ref|YP_002964361.1| putative NADH dehydrogenase (ubiquinone) Fe-S protein 4 (18kD) (NADH-coenzyme Q reductase) (nduFs4)(partial) [Methylobacterium extorquens AM1] gi|254562306|ref|YP_003069401.1| NADH dehydrogenase (ubiquinone) Fe-S protein 4 [Methylobacterium extorquens DM4] gi|163664155|gb|ABY31522.1| ETC complex I subunit conserved region [Methylobacterium extorquens PA1] gi|218523690|gb|ACK84275.1| ETC complex I subunit conserved region [Methylobacterium chloromethanicum CM4] gi|240009858|gb|ACS41084.1| putative NADH dehydrogenase (ubiquinone) Fe-S protein 4 (18kD) (NADH-coenzyme Q reductase) (nduFs4)(partial) [Methylobacterium extorquens AM1] gi|254269584|emb|CAX25554.1| putative NADH dehydrogenase (ubiquinone) Fe-S protein 4 (18kD) (NADH-coenzyme Q reductase) (nduFs4) (partial) [Methylobacterium extorquens DM4] Length = 103 Score = 132 bits (332), Expect = 2e-29, Method: Composition-based stats. Identities = 34/79 (43%), Positives = 48/79 (60%), Gaps = 1/79 (1%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKE-SQ 59 +LEF++ P +PL+G+T S D LQQV+L F + + A YA GI Y V + ++ Sbjct: 25 VLEFDQTEPRETDPLMGWTGSSDMLQQVRLEFDTSDEAVAYAKASGIAYRVEETPPPIAR 84 Query: 60 KELSYQRNFSYDRLEPWTH 78 K LSY NF ++R PWTH Sbjct: 85 KGLSYSDNFKFNRTAPWTH 103 >gi|259415581|ref|ZP_05739502.1| ETC complex I subunit conserved region [Silicibacter sp. TrichCH4B] gi|259348811|gb|EEW60573.1| ETC complex I subunit conserved region [Silicibacter sp. TrichCH4B] Length = 103 Score = 131 bits (331), Expect = 3e-29, Method: Composition-based stats. Identities = 33/80 (41%), Positives = 47/80 (58%), Gaps = 2/80 (2%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSC--KES 58 +LE+ + ++PL+G+TSS DT QV+L F S E A +YA DHGI+ V K + Sbjct: 24 VLEYAPASAREVDPLMGWTSSSDTQSQVRLKFDSKEEALEYAEDHGIEVEVQDPKTRKPN 83 Query: 59 QKELSYQRNFSYDRLEPWTH 78 + Y NF+ +R PWTH Sbjct: 84 LRAGGYGENFATNRRGPWTH 103 >gi|89069291|ref|ZP_01156654.1| NADH-ubiquinone oxidoreductase family protein [Oceanicola granulosus HTCC2516] gi|89045167|gb|EAR51235.1| NADH-ubiquinone oxidoreductase family protein [Oceanicola granulosus HTCC2516] Length = 91 Score = 131 bits (331), Expect = 3e-29, Method: Composition-based stats. Identities = 32/80 (40%), Positives = 47/80 (58%), Gaps = 2/80 (2%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKES-- 58 +L+F +P ++PL+G+TSS DT QV+L F + EAA YA +HGI+ V K + Sbjct: 12 LLDFAPRSPREVDPLMGWTSSDDTQAQVRLTFDTKEAALAYAEEHGIEVEVREPKKRAAN 71 Query: 59 QKELSYQRNFSYDRLEPWTH 78 + Y NF+ +R WTH Sbjct: 72 IRPGGYGDNFATNRRAVWTH 91 >gi|84683842|ref|ZP_01011745.1| NADH-ubiquinone oxidoreductase family protein [Maritimibacter alkaliphilus HTCC2654] gi|84668585|gb|EAQ15052.1| NADH-ubiquinone oxidoreductase family protein [Rhodobacterales bacterium HTCC2654] Length = 103 Score = 131 bits (330), Expect = 3e-29, Method: Composition-based stats. Identities = 30/80 (37%), Positives = 46/80 (57%), Gaps = 2/80 (2%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKES-- 58 +L+F + I+PL+G+TSS DT QV++ F + EAA +YA + GI V+ K Sbjct: 24 VLDFAQDEAREIDPLMGWTSSSDTQSQVRIRFATKEAAVEYAKEKGIDAVVMEPHKRKAN 83 Query: 59 QKELSYQRNFSYDRLEPWTH 78 + Y NF+ +R + WTH Sbjct: 84 IRPGGYGDNFATNRRQVWTH 103 >gi|90419544|ref|ZP_01227454.1| conserved hypothetical protein [Aurantimonas manganoxydans SI85-9A1] gi|90336481|gb|EAS50222.1| conserved hypothetical protein [Aurantimonas manganoxydans SI85-9A1] Length = 123 Score = 131 bits (330), Expect = 3e-29, Method: Composition-based stats. Identities = 34/78 (43%), Positives = 48/78 (61%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 ML +E P +EPL+GYTSS D L Q++L F + E A +YA + I Y V + + Sbjct: 46 MLVYEPEQPKRVEPLMGYTSSGDMLSQLRLSFETREQAVEYAERNDIPYRVEEPKETRRP 105 Query: 61 ELSYQRNFSYDRLEPWTH 78 +++Y NF YDR +PWTH Sbjct: 106 KIAYADNFRYDRRQPWTH 123 >gi|149914355|ref|ZP_01902886.1| NADH-ubiquinone oxidoreductase family protein [Roseobacter sp. AzwK-3b] gi|149811874|gb|EDM71707.1| NADH-ubiquinone oxidoreductase family protein [Roseobacter sp. AzwK-3b] Length = 103 Score = 131 bits (330), Expect = 3e-29, Method: Composition-based stats. Identities = 35/80 (43%), Positives = 48/80 (60%), Gaps = 2/80 (2%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQ- 59 +LE+ TP ++PL+G+TSS DT QV+L FP+ EAA YAS+HGI V+ K Sbjct: 24 VLEYFPETPREVDPLMGWTSSNDTQAQVRLKFPTKEAALDYASEHGIDAVVLEPHKRKPN 83 Query: 60 -KELSYQRNFSYDRLEPWTH 78 + Y NF+ +R WTH Sbjct: 84 IRPGGYGENFATNRRATWTH 103 >gi|116251865|ref|YP_767703.1| NADH-ubiquinone oxidoreductase subunit [Rhizobium leguminosarum bv. viciae 3841] gi|241204476|ref|YP_002975572.1| ETC complex I subunit conserved region [Rhizobium leguminosarum bv. trifolii WSM1325] gi|115256513|emb|CAK07597.1| putative NADH-ubiquinone oxidoreductase subunit [Rhizobium leguminosarum bv. viciae 3841] gi|240858366|gb|ACS56033.1| ETC complex I subunit conserved region [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 101 Score = 131 bits (330), Expect = 3e-29, Method: Composition-based stats. Identities = 35/78 (44%), Positives = 51/78 (65%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +LE+++ + I+P++GYTSS D QQVKL F + E AE YA +GI+Y VI ++ Sbjct: 24 VLEYDQESARKIDPIMGYTSSGDMRQQVKLTFETQELAEAYAQRNGIEYRVIAPKDPVRQ 83 Query: 61 ELSYQRNFSYDRLEPWTH 78 ++Y NF Y R +PWTH Sbjct: 84 VVAYPDNFRYTRTQPWTH 101 >gi|99079984|ref|YP_612138.1| ETC complex I subunit region [Ruegeria sp. TM1040] gi|99036264|gb|ABF62876.1| ETC complex I subunit conserved region [Ruegeria sp. TM1040] Length = 103 Score = 131 bits (330), Expect = 4e-29, Method: Composition-based stats. Identities = 32/80 (40%), Positives = 46/80 (57%), Gaps = 2/80 (2%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSC--KES 58 +LE+ ++PL+G+TSS DT QV+L F + E A +YA DHGI+ V K + Sbjct: 24 VLEYAPADAREVDPLMGWTSSSDTQSQVRLKFDTKEEALEYADDHGIEVEVHEPKTRKPN 83 Query: 59 QKELSYQRNFSYDRLEPWTH 78 + Y NF+ +R PWTH Sbjct: 84 LRAGGYGENFATNRRGPWTH 103 >gi|254485926|ref|ZP_05099131.1| NADH-ubiquinone oxidoreductase 18 kda subunit [Roseobacter sp. GAI101] gi|214042795|gb|EEB83433.1| NADH-ubiquinone oxidoreductase 18 kda subunit [Roseobacter sp. GAI101] Length = 91 Score = 130 bits (329), Expect = 4e-29, Method: Composition-based stats. Identities = 32/80 (40%), Positives = 44/80 (55%), Gaps = 2/80 (2%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKE--S 58 +LEF + + ++PL+G+TSS DT QVKL F + E A +YA HGI V K + Sbjct: 12 LLEFNQESAREVDPLMGWTSSNDTQTQVKLRFETKEEAVEYARSHGIDAVVQEPHKRRAN 71 Query: 59 QKELSYQRNFSYDRLEPWTH 78 + Y NF+ R WTH Sbjct: 72 IRPGGYGENFATARRGAWTH 91 >gi|159044734|ref|YP_001533528.1| putative ETC complex subunit I conserved region [Dinoroseobacter shibae DFL 12] gi|157912494|gb|ABV93927.1| putative ETC complex I subunit conserved region [Dinoroseobacter shibae DFL 12] Length = 103 Score = 130 bits (329), Expect = 4e-29, Method: Composition-based stats. Identities = 32/80 (40%), Positives = 44/80 (55%), Gaps = 2/80 (2%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQ- 59 +LEF I+PL+G+TSS DT QVKL F + EAA YA +HG++ + K Sbjct: 24 VLEFAPADARSIDPLMGWTSSSDTQSQVKLRFDTREAALDYAKEHGLEVTITEPKKRKPN 83 Query: 60 -KELSYQRNFSYDRLEPWTH 78 + Y NF+ +R WTH Sbjct: 84 IRPGGYGDNFATNRRTVWTH 103 >gi|110678581|ref|YP_681588.1| NADH-ubiquinone oxidoreductase 18 kDa subunit [Roseobacter denitrificans OCh 114] gi|109454697|gb|ABG30902.1| NADH-ubiquinone oxidoreductase 18 kDa subunit [Roseobacter denitrificans OCh 114] Length = 103 Score = 130 bits (329), Expect = 5e-29, Method: Composition-based stats. Identities = 31/80 (38%), Positives = 44/80 (55%), Gaps = 2/80 (2%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKE--S 58 +LEF + ++PL+G+TSS D QV+L F S EAA +YA ++GI V K + Sbjct: 24 ILEFAPQSSREVDPLMGWTSSSDMQSQVRLRFDSKEAAVEYARENGIDADVQEPKKRRPN 83 Query: 59 QKELSYQRNFSYDRLEPWTH 78 + Y NF+ R WTH Sbjct: 84 IRPGGYGENFATGRRGAWTH 103 >gi|222085832|ref|YP_002544363.1| NADH-ubiquinone oxidoreductase protein [Agrobacterium radiobacter K84] gi|221723280|gb|ACM26436.1| NADH-ubiquinone oxidoreductase protein [Agrobacterium radiobacter K84] Length = 101 Score = 130 bits (329), Expect = 5e-29, Method: Composition-based stats. Identities = 37/78 (47%), Positives = 53/78 (67%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +LEF++ P I+P++GYTSS DT QQ+KL F + E AE YA GI+Y VI +++ Sbjct: 24 VLEFDQEIPRKIDPIMGYTSSADTRQQLKLTFDTQEQAEAYAQREGIEYRVIAPKDANRQ 83 Query: 61 ELSYQRNFSYDRLEPWTH 78 +SY NF + R++PWTH Sbjct: 84 VVSYTDNFRFSRIQPWTH 101 >gi|149202253|ref|ZP_01879226.1| ETC complex I subunit conserved region [Roseovarius sp. TM1035] gi|149144351|gb|EDM32382.1| ETC complex I subunit conserved region [Roseovarius sp. TM1035] Length = 103 Score = 130 bits (328), Expect = 5e-29, Method: Composition-based stats. Identities = 32/80 (40%), Positives = 47/80 (58%), Gaps = 2/80 (2%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPS--CKES 58 +LEF T ++PL+G+TS+ DT QV+L F + EAA +YA +HGI V K + Sbjct: 24 VLEFVSETAREVDPLMGWTSNADTQTQVRLRFETKEAALQYAKEHGIDAVVQEPQARKPN 83 Query: 59 QKELSYQRNFSYDRLEPWTH 78 + Y NF+ +R + WTH Sbjct: 84 IRPGGYGDNFATNRRQVWTH 103 >gi|83951497|ref|ZP_00960229.1| NADH-ubiquinone oxidoreductase family protein [Roseovarius nubinhibens ISM] gi|83836503|gb|EAP75800.1| NADH-ubiquinone oxidoreductase family protein [Roseovarius nubinhibens ISM] Length = 91 Score = 130 bits (328), Expect = 6e-29, Method: Composition-based stats. Identities = 31/80 (38%), Positives = 45/80 (56%), Gaps = 2/80 (2%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSC--KES 58 +LE+ ++PL+G+TSS DT QV++ FP+ EAA YA +HGI V K + Sbjct: 12 VLEYVADQARAVDPLMGWTSSADTQAQVRINFPTKEAALDYAQEHGIDAVVQEPKTRKPN 71 Query: 59 QKELSYQRNFSYDRLEPWTH 78 + Y NF+ +R WTH Sbjct: 72 IRPGGYGENFATNRRGVWTH 91 >gi|190891574|ref|YP_001978116.1| probable NADH-ubiquinone oxidoreductase protein [Rhizobium etli CIAT 652] gi|190696853|gb|ACE90938.1| probable NADH-ubiquinone oxidoreductase protein [Rhizobium etli CIAT 652] gi|327190802|gb|EGE57870.1| putative NADH-ubiquinone oxidoreductase protein [Rhizobium etli CNPAF512] Length = 101 Score = 130 bits (327), Expect = 7e-29, Method: Composition-based stats. Identities = 36/78 (46%), Positives = 53/78 (67%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +LEF++ +P I+P++GYTSS D QQVKL F + AE YA +GI+Y VI + +++ Sbjct: 24 VLEFDQESPRKIDPIMGYTSSGDMRQQVKLTFETQALAEAYAQRNGIEYRVIAPKEPARQ 83 Query: 61 ELSYQRNFSYDRLEPWTH 78 ++Y NF Y R +PWTH Sbjct: 84 VVAYPDNFRYTRTQPWTH 101 >gi|126737419|ref|ZP_01753154.1| NADH-ubiquinone oxidoreductase family protein [Roseobacter sp. SK209-2-6] gi|126722004|gb|EBA18707.1| NADH-ubiquinone oxidoreductase family protein [Roseobacter sp. SK209-2-6] Length = 103 Score = 130 bits (327), Expect = 8e-29, Method: Composition-based stats. Identities = 32/80 (40%), Positives = 48/80 (60%), Gaps = 2/80 (2%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKE--S 58 +L++ + ++PL+G+TSSKDT QV+L F S EAA YA +HGI V+ + Sbjct: 24 VLDYAPASAREVDPLMGWTSSKDTQSQVRLRFDSKEAALDYAQEHGIDAEVVDPKPRGAN 83 Query: 59 QKELSYQRNFSYDRLEPWTH 78 ++ Y NF+ +R PWTH Sbjct: 84 IRQGGYGENFATNRRTPWTH 103 >gi|254461814|ref|ZP_05075230.1| NADH-ubiquinone oxidoreductase 18 kda subunit [Rhodobacterales bacterium HTCC2083] gi|206678403|gb|EDZ42890.1| NADH-ubiquinone oxidoreductase 18 kda subunit [Rhodobacteraceae bacterium HTCC2083] Length = 103 Score = 129 bits (326), Expect = 9e-29, Method: Composition-based stats. Identities = 32/80 (40%), Positives = 43/80 (53%), Gaps = 2/80 (2%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKES-- 58 +LE + ++PL+G+TSS DT QV+L F S EAA YA +GI V K Sbjct: 24 VLEHAPASARQVDPLMGWTSSDDTQAQVRLRFESKEAALAYAEANGIDASVREPNKRKAN 83 Query: 59 QKELSYQRNFSYDRLEPWTH 78 ++ Y NF+ DR WTH Sbjct: 84 IRKGGYAENFATDRRGAWTH 103 >gi|86357510|ref|YP_469402.1| NADH-ubiquinone oxidoreductase protein [Rhizobium etli CFN 42] gi|86281612|gb|ABC90675.1| probable NADH-ubiquinone oxidoreductase protein [Rhizobium etli CFN 42] Length = 101 Score = 129 bits (326), Expect = 9e-29, Method: Composition-based stats. Identities = 37/78 (47%), Positives = 52/78 (66%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +LEF++ TP I+P++GYTSS D QQVKL F + AE YA +GI+Y VI +++ Sbjct: 24 VLEFDQETPRKIDPIMGYTSSGDMRQQVKLTFETQALAEAYAQRNGIEYRVIAPKDPARQ 83 Query: 61 ELSYQRNFSYDRLEPWTH 78 ++Y NF Y R +PWTH Sbjct: 84 VVAYPDNFRYTRTQPWTH 101 >gi|218462855|ref|ZP_03502946.1| NADH-ubiquinone oxidoreductase protein [Rhizobium etli Kim 5] gi|218660663|ref|ZP_03516593.1| NADH-ubiquinone oxidoreductase protein [Rhizobium etli IE4771] Length = 101 Score = 129 bits (326), Expect = 1e-28, Method: Composition-based stats. Identities = 37/78 (47%), Positives = 54/78 (69%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +LEF++ +P I+P++GYTSS DT QQVKL F + AE YA +GI+Y VI + +++ Sbjct: 24 VLEFDQESPRKIDPMMGYTSSSDTRQQVKLTFETQALAEAYAQRNGIEYRVIAPKEPARQ 83 Query: 61 ELSYQRNFSYDRLEPWTH 78 ++Y NF Y R +PWTH Sbjct: 84 VVAYPDNFRYTRTQPWTH 101 >gi|218508942|ref|ZP_03506820.1| probable NADH-ubiquinone oxidoreductase protein [Rhizobium etli Brasil 5] Length = 101 Score = 129 bits (326), Expect = 1e-28, Method: Composition-based stats. Identities = 36/78 (46%), Positives = 52/78 (66%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +LEF++ +P I+P++GYTSS D QQVKL F + AE YA +GI+Y VI +++ Sbjct: 24 VLEFDQESPRKIDPIMGYTSSGDMRQQVKLTFETQALAEAYAQRNGIEYRVIAPKDPARQ 83 Query: 61 ELSYQRNFSYDRLEPWTH 78 ++Y NF Y R +PWTH Sbjct: 84 VVAYPDNFRYTRTQPWTH 101 >gi|329850704|ref|ZP_08265549.1| NADH dehydrogenase ubiquinone iron-sulfur protein 4 [Asticcacaulis biprosthecum C19] gi|328841019|gb|EGF90590.1| NADH dehydrogenase ubiquinone iron-sulfur protein 4 [Asticcacaulis biprosthecum C19] Length = 101 Score = 129 bits (325), Expect = 1e-28, Method: Composition-based stats. Identities = 29/78 (37%), Positives = 45/78 (57%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +LEFE + +PL+G++SS DT Q++L F + + A YA HGI + +I + Sbjct: 24 ILEFEPKSARTPDPLMGWSSSADTEAQIRLTFETKDQAMAYAEHHGIPFRLIEPELPPKI 83 Query: 61 ELSYQRNFSYDRLEPWTH 78 +Y NF+Y R + WTH Sbjct: 84 IKAYADNFAYTRRQSWTH 101 >gi|304319862|ref|YP_003853505.1| NADH-ubiquinone oxidoreductase-related protein [Parvularcula bermudensis HTCC2503] gi|303298765|gb|ADM08364.1| NADH-ubiquinone oxidoreductase-related protein [Parvularcula bermudensis HTCC2503] Length = 101 Score = 129 bits (325), Expect = 1e-28, Method: Composition-based stats. Identities = 34/78 (43%), Positives = 48/78 (61%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +LEFE +P +PL+G+TSS DTL QVK+ F + EAA YA + + Y V+ ++ Sbjct: 24 VLEFEGRSPRKTDPLMGWTSSADTLGQVKMTFDTKEAAIAYAKEQRLPYQVLEKPDQAPV 83 Query: 61 ELSYQRNFSYDRLEPWTH 78 SY NF++ R PWTH Sbjct: 84 PKSYADNFAFRRRTPWTH 101 >gi|163793090|ref|ZP_02187066.1| probable NADH-ubiquinone oxidoreductase-related protein [alpha proteobacterium BAL199] gi|159181736|gb|EDP66248.1| probable NADH-ubiquinone oxidoreductase-related protein [alpha proteobacterium BAL199] Length = 101 Score = 129 bits (325), Expect = 1e-28, Method: Composition-based stats. Identities = 28/78 (35%), Positives = 44/78 (56%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +LE+ T EPL+G+ SS DT QV++ F + E A +A HG Y V+ + + + Sbjct: 24 VLEYRAETARIPEPLMGWVSSGDTTNQVRIPFDTREEAVTFAKRHGFAYSVVEPHERAPR 83 Query: 61 ELSYQRNFSYDRLEPWTH 78 +Y NF+++R WTH Sbjct: 84 PKAYADNFAFNRKINWTH 101 >gi|126730953|ref|ZP_01746762.1| NADH-ubiquinone oxidoreductase family protein [Sagittula stellata E-37] gi|126708669|gb|EBA07726.1| NADH-ubiquinone oxidoreductase family protein [Sagittula stellata E-37] Length = 103 Score = 129 bits (325), Expect = 1e-28, Method: Composition-based stats. Identities = 34/79 (43%), Positives = 47/79 (59%), Gaps = 2/79 (2%) Query: 2 LEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKES--Q 59 L++ + +P I+PL+G+TSS DT QV+L F + EAA YA +HGI V+ K Sbjct: 25 LDYVQDSPRSIDPLMGWTSSADTQSQVRLRFETKEAALAYAKEHGIDATVMEPKKRKANI 84 Query: 60 KELSYQRNFSYDRLEPWTH 78 + Y NF+ DR PWTH Sbjct: 85 RARGYAENFASDRRAPWTH 103 >gi|49475707|ref|YP_033748.1| NADH-ubiquinone oxidoreductase [Bartonella henselae str. Houston-1] gi|49238514|emb|CAF27746.1| NADH-ubiquinone oxidoreductase [Bartonella henselae str. Houston-1] Length = 101 Score = 129 bits (324), Expect = 2e-28, Method: Composition-based stats. Identities = 30/78 (38%), Positives = 44/78 (56%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +L++E I +EPL+GYT++ D QVK+ F E A +A + I Y V K ++ Sbjct: 24 ILQYEPIKAKMLEPLMGYTATSDMNNQVKIRFNKKEEAVAFARKNAIPYRVEKMHKPIRR 83 Query: 61 ELSYQRNFSYDRLEPWTH 78 +SY NF DR + WTH Sbjct: 84 VVSYSDNFRSDRQQSWTH 101 >gi|260575336|ref|ZP_05843336.1| ETC complex I subunit conserved region [Rhodobacter sp. SW2] gi|259022596|gb|EEW25892.1| ETC complex I subunit conserved region [Rhodobacter sp. SW2] Length = 103 Score = 129 bits (324), Expect = 2e-28, Method: Composition-based stats. Identities = 33/80 (41%), Positives = 44/80 (55%), Gaps = 2/80 (2%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKES-- 58 +LEF + + ++PL+G+TSS D QV+L F S EAAE YAS HGI I Sbjct: 24 VLEFSQDSAREVDPLMGWTSSTDMDSQVRLQFDSREAAEAYASAHGIDAVAIQPKPRKAN 83 Query: 59 QKELSYQRNFSYDRLEPWTH 78 + Y NF+ +R WTH Sbjct: 84 IRPGGYGDNFATNRRGVWTH 103 >gi|89056091|ref|YP_511542.1| ETC complex I subunit protein [Jannaschia sp. CCS1] gi|88865640|gb|ABD56517.1| ETC complex I subunit conserved protein [Jannaschia sp. CCS1] Length = 103 Score = 129 bits (324), Expect = 2e-28, Method: Composition-based stats. Identities = 31/80 (38%), Positives = 44/80 (55%), Gaps = 2/80 (2%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSC--KES 58 +LEF I+PL+G+TSS D QV L F + EAA+ YA +GI+ V+ K + Sbjct: 24 VLEFLPSQARAIDPLMGWTSSSDMDSQVHLRFETAEAAKDYAKANGIEAVVLKPKSRKPN 83 Query: 59 QKELSYQRNFSYDRLEPWTH 78 + Y NF+ +R WTH Sbjct: 84 IRAGGYGENFATNRRGAWTH 103 >gi|197105100|ref|YP_002130477.1| NADH-ubiquinone oxidoreductase-related protein [Phenylobacterium zucineum HLK1] gi|196478520|gb|ACG78048.1| NADH-ubiquinone oxidoreductase-related protein [Phenylobacterium zucineum HLK1] Length = 102 Score = 128 bits (323), Expect = 2e-28, Method: Composition-based stats. Identities = 29/79 (36%), Positives = 44/79 (55%), Gaps = 1/79 (1%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQ-QVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQ 59 +LEFE +PL+G+T + DT QV+L F + E A +YA HGI + ++ + Sbjct: 24 VLEFEPKAARRPDPLMGWTQTTDTESSQVRLHFETKEDAVRYAEQHGIAFQLVDPKPAKR 83 Query: 60 KELSYQRNFSYDRLEPWTH 78 +Y NF++ R PWTH Sbjct: 84 IIKAYADNFAFGRRIPWTH 102 >gi|163735211|ref|ZP_02142646.1| NADH-ubiquinone oxidoreductase 18 kDa subunit [Roseobacter litoralis Och 149] gi|161391425|gb|EDQ15759.1| NADH-ubiquinone oxidoreductase 18 kDa subunit [Roseobacter litoralis Och 149] Length = 103 Score = 128 bits (323), Expect = 2e-28, Method: Composition-based stats. Identities = 30/80 (37%), Positives = 44/80 (55%), Gaps = 2/80 (2%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKE--S 58 +LEF + ++PL+G+TSS D QVKL F + EAA +YA ++GI + K + Sbjct: 24 ILEFAPGSSREVDPLMGWTSSSDMQSQVKLRFDTKEAAVEYARENGIDADIQEPKKRRPN 83 Query: 59 QKELSYQRNFSYDRLEPWTH 78 + Y NF+ R WTH Sbjct: 84 IRAGGYGENFATGRRGAWTH 103 >gi|49474321|ref|YP_032363.1| NADH-ubiquinone oxidoreductase [Bartonella quintana str. Toulouse] gi|49239825|emb|CAF26218.1| NADH-ubiquinone oxidoreductase [Bartonella quintana str. Toulouse] Length = 101 Score = 128 bits (323), Expect = 2e-28, Method: Composition-based stats. Identities = 28/78 (35%), Positives = 45/78 (57%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +L++E I +EPL+GYT++ D QV++ F E A +A + I Y V + + ++ Sbjct: 24 ILQYEPIQAKMLEPLMGYTATSDMNNQVRIRFNRKEEAIAFARKNAIPYRVEKTHRPIRR 83 Query: 61 ELSYQRNFSYDRLEPWTH 78 +SY NF DR + WTH Sbjct: 84 AVSYSDNFRSDRQQSWTH 101 >gi|126727447|ref|ZP_01743281.1| NADH-ubiquinone oxidoreductase family protein [Rhodobacterales bacterium HTCC2150] gi|126703227|gb|EBA02326.1| NADH-ubiquinone oxidoreductase family protein [Rhodobacterales bacterium HTCC2150] Length = 104 Score = 128 bits (322), Expect = 3e-28, Method: Composition-based stats. Identities = 30/80 (37%), Positives = 43/80 (53%), Gaps = 2/80 (2%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKES-- 58 +LEF+ ++PL+G+T S DT QV L F + EAA+ YA ++GI V K Sbjct: 25 VLEFDASESQQVDPLMGWTGSSDTQSQVHLRFDTKEAAQAYAEENGIMAQVTEPQKRKAN 84 Query: 59 QKELSYQRNFSYDRLEPWTH 78 + Y NF+ +R WTH Sbjct: 85 VRAAGYAENFATNRRGVWTH 104 >gi|319405634|emb|CBI79257.1| NADH-ubiquinone oxidoreductase [Bartonella sp. AR 15-3] Length = 101 Score = 128 bits (322), Expect = 3e-28, Method: Composition-based stats. Identities = 29/78 (37%), Positives = 45/78 (57%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +L++E IEPL+GYT++ D Q+K+ F + E A +A + I Y V K ++ Sbjct: 24 ILQYEPAQRKMIEPLMGYTATTDINSQIKIRFQTKEEAINFAIRNAIPYRVENLHKTLRR 83 Query: 61 ELSYQRNFSYDRLEPWTH 78 +SY NF +R +PWTH Sbjct: 84 AISYSDNFHSNRQQPWTH 101 >gi|319404188|emb|CBI77781.1| NADH-ubiquinone oxidoreductase [Bartonella rochalimae ATCC BAA-1498] Length = 101 Score = 128 bits (322), Expect = 3e-28, Method: Composition-based stats. Identities = 29/78 (37%), Positives = 45/78 (57%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +L++E + IEPL+GYT++ D Q+K+ F + E A +A + I Y V K ++ Sbjct: 24 ILQYEPVQAKMIEPLMGYTATSDINSQIKIRFQTKEEAINFAIKNAIPYRVENLHKALRR 83 Query: 61 ELSYQRNFSYDRLEPWTH 78 +SY NF R +PWTH Sbjct: 84 AISYSDNFHSSRQQPWTH 101 >gi|260428109|ref|ZP_05782088.1| NADH-ubiquinone oxidoreductase 18 kda subunit [Citreicella sp. SE45] gi|260422601|gb|EEX15852.1| NADH-ubiquinone oxidoreductase 18 kda subunit [Citreicella sp. SE45] Length = 103 Score = 128 bits (322), Expect = 3e-28, Method: Composition-based stats. Identities = 34/79 (43%), Positives = 45/79 (56%), Gaps = 2/79 (2%) Query: 2 LEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKES--Q 59 LEF +P ++PL+G+TSS DT QV+L F S EAA YA ++GI+ V K Sbjct: 25 LEFAASSPREVDPLMGWTSSSDTQSQVRLKFDSKEAALDYARENGIEATVQEPHKRKTNV 84 Query: 60 KELSYQRNFSYDRLEPWTH 78 + Y NF+ DR WTH Sbjct: 85 RPRGYAENFAVDRRGAWTH 103 >gi|114770190|ref|ZP_01447728.1| NADH-ubiquinone oxidoreductase family protein [alpha proteobacterium HTCC2255] gi|114549027|gb|EAU51910.1| NADH-ubiquinone oxidoreductase family protein [alpha proteobacterium HTCC2255] Length = 103 Score = 128 bits (322), Expect = 3e-28, Method: Composition-based stats. Identities = 31/80 (38%), Positives = 42/80 (52%), Gaps = 2/80 (2%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKES-- 58 +LEF + I+PL+G+TSS D QVKL F S + A YA GI Y + + Sbjct: 24 VLEFSQSEVRNIDPLMGWTSSGDMDSQVKLSFESKDEAISYADQKGITYTLQEPKERKHV 83 Query: 59 QKELSYQRNFSYDRLEPWTH 78 + Y NF+ +R E WTH Sbjct: 84 IRNGGYGDNFATNRKETWTH 103 >gi|121601871|ref|YP_989064.1| putative NADH dehydrogenase (quinone) subunit [Bartonella bacilliformis KC583] gi|120614048|gb|ABM44649.1| putative NADH dehydrogenase (quinone) subunit [Bartonella bacilliformis KC583] Length = 101 Score = 128 bits (322), Expect = 3e-28, Method: Composition-based stats. Identities = 30/78 (38%), Positives = 44/78 (56%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +L++E P EPL+GYT++ D Q+K+ F E A +A + I Y V K S++ Sbjct: 24 ILQYEPERPKMCEPLMGYTATSDMNSQIKIQFKMKEEAIAFAIKNDIPYRVENVYKTSRR 83 Query: 61 ELSYQRNFSYDRLEPWTH 78 +SY NF DR + WTH Sbjct: 84 AISYADNFRSDRQQSWTH 101 >gi|218672200|ref|ZP_03521869.1| probable NADH-ubiquinone oxidoreductase protein [Rhizobium etli GR56] Length = 101 Score = 128 bits (322), Expect = 3e-28, Method: Composition-based stats. Identities = 36/78 (46%), Positives = 51/78 (65%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +LEF++ +P I+P++GYTSS D QQVKL F + AE YA +GI+Y VI +++ Sbjct: 24 VLEFDQESPRKIDPIMGYTSSGDMRQQVKLTFETQALAEAYAQRNGIEYRVIAPKDPARQ 83 Query: 61 ELSYQRNFSYDRLEPWTH 78 +SY NF Y R + WTH Sbjct: 84 VVSYPDNFRYTRTQLWTH 101 >gi|307942455|ref|ZP_07657806.1| ETC complex I subunit region [Roseibium sp. TrichSKD4] gi|307774741|gb|EFO33951.1| ETC complex I subunit region [Roseibium sp. TrichSKD4] Length = 110 Score = 127 bits (321), Expect = 4e-28, Method: Composition-based stats. Identities = 31/78 (39%), Positives = 47/78 (60%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +L++E +EPL+GYTSS D QQ++L+F S E A YA +GI + V + + + + Sbjct: 33 ILDYEPEAARSVEPLMGYTSSSDMKQQIRLYFDSKEDAVAYARRYGIAHRVEEAKERTVR 92 Query: 61 ELSYQRNFSYDRLEPWTH 78 +Y NF + R PWTH Sbjct: 93 TATYADNFKFSRRAPWTH 110 >gi|319407206|emb|CBI80845.1| NADH-ubiquinone oxidoreductase [Bartonella sp. 1-1C] Length = 101 Score = 127 bits (321), Expect = 4e-28, Method: Composition-based stats. Identities = 29/78 (37%), Positives = 45/78 (57%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +L++E + IEPL+GYT++ D Q+K+ F + E A +A + I Y V K ++ Sbjct: 24 LLQYEPMQAKMIEPLMGYTTTSDINSQIKIRFQTKEEAINFAIKNAIPYRVENLHKTLRR 83 Query: 61 ELSYQRNFSYDRLEPWTH 78 +SY NF R +PWTH Sbjct: 84 VISYSDNFHSSRQQPWTH 101 >gi|114765086|ref|ZP_01444231.1| NADH-ubiquinone oxidoreductase family protein [Pelagibaca bermudensis HTCC2601] gi|114542490|gb|EAU45516.1| NADH-ubiquinone oxidoreductase family protein [Roseovarius sp. HTCC2601] Length = 103 Score = 127 bits (321), Expect = 4e-28, Method: Composition-based stats. Identities = 34/80 (42%), Positives = 45/80 (56%), Gaps = 2/80 (2%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQ- 59 +LEF P ++PL+G+TSS DT QV+L F S EAA YA ++GI+ V K Sbjct: 24 VLEFAASAPREVDPLMGWTSSSDTQSQVRLRFDSKEAALDYAKENGIEATVSEPNKRKPN 83 Query: 60 -KELSYQRNFSYDRLEPWTH 78 + Y NF+ DR WTH Sbjct: 84 VRARGYAENFAVDRRGAWTH 103 >gi|114570046|ref|YP_756726.1| ETC complex I subunit region [Maricaulis maris MCS10] gi|114340508|gb|ABI65788.1| ETC complex I subunit conserved region [Maricaulis maris MCS10] Length = 101 Score = 127 bits (320), Expect = 5e-28, Method: Composition-based stats. Identities = 31/78 (39%), Positives = 43/78 (55%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +LEF +PL+G+TSS D Q+KL F S + A YA GI + V+ + + Sbjct: 24 VLEFSPEMAKRADPLMGWTSSSDMRGQIKLDFDSQDDAVAYAKRQGIPFQVVEPQEPKRY 83 Query: 61 ELSYQRNFSYDRLEPWTH 78 SY NFS DR +PW+H Sbjct: 84 SKSYSANFSADRKQPWSH 101 >gi|300022583|ref|YP_003755194.1| ETC complex I subunit conserved region [Hyphomicrobium denitrificans ATCC 51888] gi|299524404|gb|ADJ22873.1| ETC complex I subunit conserved region [Hyphomicrobium denitrificans ATCC 51888] Length = 101 Score = 127 bits (320), Expect = 5e-28, Method: Composition-based stats. Identities = 30/78 (38%), Positives = 41/78 (52%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +LEF TP +PL+G+TS++DT QV+L F + E A YA G+ Y + Sbjct: 24 VLEFAPATPRAADPLMGWTSTRDTQTQVRLEFETKEEAIAYAVREGLSYSLAEPKPRKPI 83 Query: 61 ELSYQRNFSYDRLEPWTH 78 SY NF + R WTH Sbjct: 84 RKSYADNFRFGRATNWTH 101 >gi|163868486|ref|YP_001609695.1| NADH-ubiquinone oxidoreductase [Bartonella tribocorum CIP 105476] gi|161018142|emb|CAK01700.1| NADH-ubiquinone oxidoreductase [Bartonella tribocorum CIP 105476] Length = 101 Score = 127 bits (320), Expect = 5e-28, Method: Composition-based stats. Identities = 27/78 (34%), Positives = 44/78 (56%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +L++E + +EPL+GYT++ D QV++ F E A +A + I Y V + ++ Sbjct: 24 ILQYEPMKAKMLEPLMGYTATSDMNSQVRIRFNRREEAVAFARRNAIPYRVEKTHASIRR 83 Query: 61 ELSYQRNFSYDRLEPWTH 78 +SY NF DR + WTH Sbjct: 84 AVSYSDNFRSDRQQSWTH 101 >gi|296448674|ref|ZP_06890538.1| ETC complex I subunit conserved region [Methylosinus trichosporium OB3b] gi|296253821|gb|EFH00984.1| ETC complex I subunit conserved region [Methylosinus trichosporium OB3b] Length = 102 Score = 127 bits (319), Expect = 6e-28, Method: Composition-based stats. Identities = 31/79 (39%), Positives = 45/79 (56%), Gaps = 1/79 (1%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCK-ESQ 59 +LEFE+ TP ++PL+G+TSS DT Q++L F + E A YA + + Y V Sbjct: 24 VLEFERETPRELDPLMGWTSSSDTKAQIRLRFATKEEAISYAERNYLVYRVEEPKPGAKP 83 Query: 60 KELSYQRNFSYDRLEPWTH 78 + +SY NF R+ WTH Sbjct: 84 RLISYSDNFRTQRVGQWTH 102 >gi|255263771|ref|ZP_05343113.1| NADH dehydrogenase (ubiquinone) iron-sulfur protein 4, precursor [Thalassiobium sp. R2A62] gi|255106106|gb|EET48780.1| NADH dehydrogenase (ubiquinone) iron-sulfur protein 4, precursor [Thalassiobium sp. R2A62] Length = 103 Score = 127 bits (319), Expect = 6e-28, Method: Composition-based stats. Identities = 31/80 (38%), Positives = 47/80 (58%), Gaps = 2/80 (2%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKE--S 58 +LEF + + I+PL+G+TSS DT QV++ F + EAA +YA+D+GI V + Sbjct: 24 VLEFTRDSAREIDPLMGWTSSSDTQSQVRMTFDTKEAAVEYAADNGIDAAVTEPKPRRAN 83 Query: 59 QKELSYQRNFSYDRLEPWTH 78 + Y NF+ +R WTH Sbjct: 84 IRANGYAENFATNRRGAWTH 103 >gi|119384054|ref|YP_915110.1| ETC complex I subunit region [Paracoccus denitrificans PD1222] gi|119384327|ref|YP_915383.1| ETC complex I subunit region [Paracoccus denitrificans PD1222] gi|119373821|gb|ABL69414.1| ETC complex I subunit conserved region [Paracoccus denitrificans PD1222] gi|119374094|gb|ABL69687.1| ETC complex I subunit conserved region [Paracoccus denitrificans PD1222] Length = 103 Score = 127 bits (319), Expect = 7e-28, Method: Composition-based stats. Identities = 34/80 (42%), Positives = 47/80 (58%), Gaps = 2/80 (2%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKES-- 58 +L+F P I+PL+G+TSS DT QV+L F + + AE YA +HG+ Y VI + Sbjct: 24 VLDFPPADPRAIDPLMGWTSSDDTQSQVRLRFETRKQAEDYAREHGLDYEVIEPHTRAAN 83 Query: 59 QKELSYQRNFSYDRLEPWTH 78 + Y NF+ DR PWTH Sbjct: 84 IRPRGYGENFASDRRAPWTH 103 >gi|296116510|ref|ZP_06835120.1| ETC complex I subunit conserved region [Gluconacetobacter hansenii ATCC 23769] gi|295976722|gb|EFG83490.1| ETC complex I subunit conserved region [Gluconacetobacter hansenii ATCC 23769] Length = 101 Score = 127 bits (319), Expect = 7e-28, Method: Composition-based stats. Identities = 28/78 (35%), Positives = 48/78 (61%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +LE+ + P +++ L+G+T S+DTL Q++L FP+ +AA YA + I Y + ++ Sbjct: 24 VLEYGQTQPRHVDALMGWTGSRDTLSQLRLQFPTQDAAVAYARHNNIGYDLELPVPRVRR 83 Query: 61 ELSYQRNFSYDRLEPWTH 78 +Y NF DR++ WTH Sbjct: 84 PKAYADNFRSDRIQNWTH 101 >gi|162148990|ref|YP_001603451.1| putative oxidoreductase [Gluconacetobacter diazotrophicus PAl 5] gi|209545257|ref|YP_002277486.1| ETC complex subunit I conserved region [Gluconacetobacter diazotrophicus PAl 5] gi|161787567|emb|CAP57163.1| putative oxidoreductase [Gluconacetobacter diazotrophicus PAl 5] gi|209532934|gb|ACI52871.1| ETC complex I subunit conserved region [Gluconacetobacter diazotrophicus PAl 5] Length = 101 Score = 126 bits (318), Expect = 8e-28, Method: Composition-based stats. Identities = 31/78 (39%), Positives = 45/78 (57%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +LE+ + P +PL+G+T S+DT QV+L FP+ E A YA H + Y + +K Sbjct: 24 VLEYGQTQPRQQDPLMGWTGSRDTRSQVRLRFPNRETAVAYAERHAVPYDLELPVARVRK 83 Query: 61 ELSYQRNFSYDRLEPWTH 78 Y NF YDR++ WTH Sbjct: 84 PKLYADNFRYDRVQNWTH 101 >gi|319408622|emb|CBI82277.1| NADH-ubiquinone oxidoreductase [Bartonella schoenbuchensis R1] Length = 102 Score = 126 bits (318), Expect = 9e-28, Method: Composition-based stats. Identities = 31/79 (39%), Positives = 46/79 (58%), Gaps = 1/79 (1%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKES-Q 59 +L++E +EPL+GYT++ D Q+K+ F E A +A + I Y V SCK S + Sbjct: 24 VLQYEPEQAKMLEPLMGYTATSDMNSQIKIRFKIKEEAIAFALKNSIPYRVENSCKPSFR 83 Query: 60 KELSYQRNFSYDRLEPWTH 78 + +SY NF DR + WTH Sbjct: 84 RAVSYSDNFRSDRQQSWTH 102 >gi|85707214|ref|ZP_01038300.1| NADH-ubiquinone oxidoreductase family protein [Roseovarius sp. 217] gi|85668268|gb|EAQ23143.1| NADH-ubiquinone oxidoreductase family protein [Roseovarius sp. 217] Length = 103 Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats. Identities = 33/80 (41%), Positives = 45/80 (56%), Gaps = 2/80 (2%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSC--KES 58 +LEF T ++PL+G+TS+ DT QV+L F S EAA +YA D GI V K + Sbjct: 24 VLEFVSETAREVDPLMGWTSNADTQAQVRLRFESKEAALQYAKDQGIDAVVQEPHARKPN 83 Query: 59 QKELSYQRNFSYDRLEPWTH 78 + Y NF+ R + WTH Sbjct: 84 IRPGGYGDNFATSRRQVWTH 103 >gi|83953449|ref|ZP_00962171.1| NADH-ubiquinone oxidoreductase family protein [Sulfitobacter sp. NAS-14.1] gi|83842417|gb|EAP81585.1| NADH-ubiquinone oxidoreductase family protein [Sulfitobacter sp. NAS-14.1] Length = 91 Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats. Identities = 33/80 (41%), Positives = 44/80 (55%), Gaps = 2/80 (2%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKE--S 58 +LEF+ I+PL+G+TSSKDT QV+L F + E A +YA DH I V K + Sbjct: 12 LLEFDPEHAREIDPLMGWTSSKDTQTQVRLQFATKEEAVEYARDHNIDALVQDPNKRRAN 71 Query: 59 QKELSYQRNFSYDRLEPWTH 78 + Y NF+ R WTH Sbjct: 72 VRAGGYGENFATGRRGAWTH 91 >gi|319898871|ref|YP_004158964.1| NADH-ubiquinone oxidoreductase [Bartonella clarridgeiae 73] gi|319402835|emb|CBI76386.1| NADH-ubiquinone oxidoreductase [Bartonella clarridgeiae 73] Length = 101 Score = 125 bits (316), Expect = 2e-27, Method: Composition-based stats. Identities = 30/78 (38%), Positives = 45/78 (57%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +L++E + IEPL+GYT++ D Q+K+ F + E A +A + I Y V K Q+ Sbjct: 24 ILQYEPVQTKMIEPLMGYTATADINSQIKIRFKTKEEAIAFAVKNAIPYRVENLHKPLQR 83 Query: 61 ELSYQRNFSYDRLEPWTH 78 +SY NF R +PWTH Sbjct: 84 AISYSDNFHNSRQQPWTH 101 >gi|294084026|ref|YP_003550783.1| NADH-ubiquinone oxidoreductase 18 kDa subunit-like protein [Candidatus Puniceispirillum marinum IMCC1322] gi|292663598|gb|ADE38699.1| NADH-ubiquinone oxidoreductase 18 kDa subunit-like protein [Candidatus Puniceispirillum marinum IMCC1322] Length = 105 Score = 125 bits (315), Expect = 2e-27, Method: Composition-based stats. Identities = 30/78 (38%), Positives = 43/78 (55%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +L F + + L+G+ SS DT +QV++ FPS EAA YA HGI + V K Sbjct: 28 VLSFPRSEGARPDSLMGWQSSSDTARQVRMRFPSKEAAIAYAEAHGIDFDVREPTSRKVK 87 Query: 61 ELSYQRNFSYDRLEPWTH 78 +Y NF+++R WTH Sbjct: 88 PRAYADNFAFNRKGAWTH 105 >gi|240850718|ref|YP_002972118.1| NADH-ubiquinone oxidoreductase [Bartonella grahamii as4aup] gi|240267841|gb|ACS51429.1| NADH-ubiquinone oxidoreductase [Bartonella grahamii as4aup] Length = 101 Score = 125 bits (314), Expect = 2e-27, Method: Composition-based stats. Identities = 28/78 (35%), Positives = 42/78 (53%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +LE+E + +EPL+GYT++ D QV++ F E A +A + I Y V ++ Sbjct: 24 ILEYEPVKAKMLEPLMGYTATSDMNNQVRIRFNRKEEAIAFARKNAISYRVEKKRTSIRR 83 Query: 61 ELSYQRNFSYDRLEPWTH 78 +SY NF DR WTH Sbjct: 84 AISYSDNFRSDRQHSWTH 101 >gi|254780174|ref|YP_003064587.1| putative oxidoreductase protein [Candidatus Liberibacter asiaticus str. psy62] gi|254039851|gb|ACT56647.1| putative oxidoreductase protein [Candidatus Liberibacter asiaticus str. psy62] Length = 78 Score = 125 bits (314), Expect = 2e-27, Method: Composition-based stats. Identities = 78/78 (100%), Positives = 78/78 (100%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK Sbjct: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 Query: 61 ELSYQRNFSYDRLEPWTH 78 ELSYQRNFSYDRLEPWTH Sbjct: 61 ELSYQRNFSYDRLEPWTH 78 >gi|163744634|ref|ZP_02151994.1| NADH-ubiquinone oxidoreductase 18 kDa subunit [Oceanibulbus indolifex HEL-45] gi|161381452|gb|EDQ05861.1| NADH-ubiquinone oxidoreductase 18 kDa subunit [Oceanibulbus indolifex HEL-45] Length = 103 Score = 125 bits (314), Expect = 3e-27, Method: Composition-based stats. Identities = 34/80 (42%), Positives = 44/80 (55%), Gaps = 2/80 (2%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQ- 59 +LEF ++PL+G+TSS DT QV+L F + EAAE+YA DHGI V K Sbjct: 24 LLEFSPAEARSVDPLMGWTSSDDTQSQVRLEFDTREAAEEYARDHGIDAQVQLPNKRKPN 83 Query: 60 -KELSYQRNFSYDRLEPWTH 78 + Y NF+ R WTH Sbjct: 84 IRAGGYGENFATGRRGAWTH 103 >gi|330994391|ref|ZP_08318317.1| NADH dehydrogenase [ubiquinone] iron-sulfur protein 4 [Gluconacetobacter sp. SXCC-1] gi|329758517|gb|EGG75035.1| NADH dehydrogenase [ubiquinone] iron-sulfur protein 4 [Gluconacetobacter sp. SXCC-1] Length = 103 Score = 124 bits (313), Expect = 3e-27, Method: Composition-based stats. Identities = 26/78 (33%), Positives = 48/78 (61%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +L++ + P +++ L+G+T S DT Q++L FP ++A YA+ +GI + + ++ Sbjct: 26 VLDYGQNRPRHVDALMGWTGSADTPSQLRLQFPDQDSAVAYATHNGIAFDIEIPAPRIRR 85 Query: 61 ELSYQRNFSYDRLEPWTH 78 +Y NF YDR++ WTH Sbjct: 86 PKAYADNFRYDRIQNWTH 103 >gi|84502901|ref|ZP_01001014.1| NADH-ubiquinone oxidoreductase family protein [Oceanicola batsensis HTCC2597] gi|84388884|gb|EAQ01754.1| NADH-ubiquinone oxidoreductase family protein [Oceanicola batsensis HTCC2597] Length = 103 Score = 124 bits (313), Expect = 3e-27, Method: Composition-based stats. Identities = 33/80 (41%), Positives = 48/80 (60%), Gaps = 2/80 (2%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSC--KES 58 +L+F T ++PL+G+TS+ DT QV++ FP+ EAA +YA DHGI VI K + Sbjct: 24 VLDFVSDTRREVDPLMGWTSNDDTQAQVRMRFPTREAAVEYARDHGIDAVVIEPHSRKPN 83 Query: 59 QKELSYQRNFSYDRLEPWTH 78 + Y NF+ +R WTH Sbjct: 84 VRPGGYGDNFATNRRLVWTH 103 >gi|84516970|ref|ZP_01004327.1| NADH-ubiquinone oxidoreductase family protein [Loktanella vestfoldensis SKA53] gi|84509088|gb|EAQ05548.1| NADH-ubiquinone oxidoreductase family protein [Loktanella vestfoldensis SKA53] Length = 108 Score = 124 bits (312), Expect = 4e-27, Method: Composition-based stats. Identities = 32/80 (40%), Positives = 45/80 (56%), Gaps = 2/80 (2%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSC--KES 58 +LE I+PL+G+TSS DT QV+L+F S EAA YA ++GI+ V K + Sbjct: 29 VLEHVAEAARSIDPLMGWTSSSDTQAQVRLYFDSKEAALDYAHENGIEAVVQDPKLRKPN 88 Query: 59 QKELSYQRNFSYDRLEPWTH 78 + Y NF+ +R WTH Sbjct: 89 IRAGGYGENFATNRRGAWTH 108 >gi|315122677|ref|YP_004063166.1| putative oxidoreductase protein [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313496079|gb|ADR52678.1| putative oxidoreductase protein [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 103 Score = 124 bits (312), Expect = 4e-27, Method: Composition-based stats. Identities = 62/78 (79%), Positives = 67/78 (85%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +LEFE+ PYIEPLLGYTSSKDTLQQVKLFF SLE AEKYA DH IQY VIP KESQK Sbjct: 26 VLEFERQIAPYIEPLLGYTSSKDTLQQVKLFFLSLEEAEKYAKDHEIQYHVIPLHKESQK 85 Query: 61 ELSYQRNFSYDRLEPWTH 78 ++SYQ NFSY+RLEPWTH Sbjct: 86 KISYQNNFSYNRLEPWTH 103 >gi|83858257|ref|ZP_00951779.1| NADH-ubiquinone oxidoreductase-related protein [Oceanicaulis alexandrii HTCC2633] gi|83853080|gb|EAP90932.1| NADH-ubiquinone oxidoreductase-related protein [Oceanicaulis alexandrii HTCC2633] Length = 101 Score = 124 bits (312), Expect = 4e-27, Method: Composition-based stats. Identities = 31/78 (39%), Positives = 45/78 (57%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +LEFE +PL+G++S+ D +Q+ L F S + A YA HGI + V + + +K Sbjct: 24 VLEFEPAMAKRPDPLMGWSSTSDMRRQIHLNFESKDEAVSYAQRHGIAFQVREARETPRK 83 Query: 61 ELSYQRNFSYDRLEPWTH 78 SY NF DR EPW+H Sbjct: 84 IKSYASNFDADRKEPWSH 101 >gi|221638488|ref|YP_002524750.1| ETC complex I subunit conserved region [Rhodobacter sphaeroides KD131] gi|221159269|gb|ACM00249.1| ETC complex I subunit conserved region [Rhodobacter sphaeroides KD131] Length = 91 Score = 124 bits (312), Expect = 4e-27, Method: Composition-based stats. Identities = 33/80 (41%), Positives = 41/80 (51%), Gaps = 2/80 (2%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKES-- 58 +L FE I+PL+G+TSS DT QV L F S EAA YA H I+ V + Sbjct: 12 VLVFESREARDIDPLMGWTSSADTQNQVVLQFDSREAALDYAKAHRIEVEVTEAKPRKAN 71 Query: 59 QKELSYQRNFSYDRLEPWTH 78 + Y NF+ DR WTH Sbjct: 72 IRPRGYGENFATDRRGAWTH 91 >gi|83944408|ref|ZP_00956862.1| NADH-ubiquinone oxidoreductase family protein [Sulfitobacter sp. EE-36] gi|83844731|gb|EAP82614.1| NADH-ubiquinone oxidoreductase family protein [Sulfitobacter sp. EE-36] Length = 103 Score = 124 bits (312), Expect = 5e-27, Method: Composition-based stats. Identities = 33/80 (41%), Positives = 44/80 (55%), Gaps = 2/80 (2%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKE--S 58 +LEF+ I+PL+G+TSSKDT QV+L F + E A +YA DH I V K + Sbjct: 24 LLEFDPEHAREIDPLMGWTSSKDTQTQVRLQFATKEEAVEYARDHNIDALVQDPNKRRAN 83 Query: 59 QKELSYQRNFSYDRLEPWTH 78 + Y NF+ R WTH Sbjct: 84 VRAGGYGENFATGRRGAWTH 103 >gi|254450951|ref|ZP_05064388.1| NADH-ubiquinone oxidoreductase 18 kda subunit [Octadecabacter antarcticus 238] gi|198265357|gb|EDY89627.1| NADH-ubiquinone oxidoreductase 18 kda subunit [Octadecabacter antarcticus 238] Length = 103 Score = 123 bits (309), Expect = 9e-27, Method: Composition-based stats. Identities = 29/80 (36%), Positives = 44/80 (55%), Gaps = 2/80 (2%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKE--S 58 +LEF + ++PL+G+TSS DT QVK+ F + +AA YA+ + I V K + Sbjct: 24 VLEFAQAFAREVDPLMGWTSSSDTQTQVKMTFETKDAALDYAAANSIDASVQEPKKRRAN 83 Query: 59 QKELSYQRNFSYDRLEPWTH 78 + Y NF+ +R WTH Sbjct: 84 IRVGGYGENFATNRRGAWTH 103 >gi|126733413|ref|ZP_01749160.1| NADH-ubiquinone oxidoreductase 18 kDa subunit [Roseobacter sp. CCS2] gi|126716279|gb|EBA13143.1| NADH-ubiquinone oxidoreductase 18 kDa subunit [Roseobacter sp. CCS2] Length = 103 Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats. Identities = 30/80 (37%), Positives = 42/80 (52%), Gaps = 2/80 (2%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKES-- 58 +LE T ++PL+G+TSS DT QVKL F + EAA +YA ++ I V Sbjct: 24 VLEHVAETAREVDPLMGWTSSSDTQAQVKLEFDTKEAALEYARENSIDAVVREPKARKAN 83 Query: 59 QKELSYQRNFSYDRLEPWTH 78 + Y NF+ +R WTH Sbjct: 84 IRPGGYGENFATNRRGAWTH 103 >gi|304391353|ref|ZP_07373295.1| ETC complex I subunit region [Ahrensia sp. R2A130] gi|303295582|gb|EFL89940.1| ETC complex I subunit region [Ahrensia sp. R2A130] Length = 101 Score = 122 bits (308), Expect = 1e-26, Method: Composition-based stats. Identities = 31/78 (39%), Positives = 44/78 (56%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +L++E +PL+GYT++ DTL QV + F + E A YA + I Y V + + Sbjct: 24 VLKYEAEGRKGTDPLMGYTATSDTLSQVSMRFETREDAVDYAERNDIAYRVQEPKEARRS 83 Query: 61 ELSYQRNFSYDRLEPWTH 78 +SY NF YDR PWTH Sbjct: 84 AVSYSDNFKYDRKVPWTH 101 >gi|77462634|ref|YP_352138.1| putative NADH-ubiquinone oxidoreductase-related protein [Rhodobacter sphaeroides 2.4.1] gi|126461526|ref|YP_001042640.1| ETC complex I subunit region [Rhodobacter sphaeroides ATCC 17029] gi|77387052|gb|ABA78237.1| putative NADH-ubiquinone oxidoreductase-related protein [Rhodobacter sphaeroides 2.4.1] gi|126103190|gb|ABN75868.1| ETC complex I subunit conserved region [Rhodobacter sphaeroides ATCC 17029] Length = 103 Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats. Identities = 33/80 (41%), Positives = 41/80 (51%), Gaps = 2/80 (2%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKES-- 58 +L FE I+PL+G+TSS DT QV L F S EAA YA H I+ V + Sbjct: 24 VLVFESREARDIDPLMGWTSSADTQNQVVLQFDSREAALDYAKAHRIEVEVTEAKPRKAN 83 Query: 59 QKELSYQRNFSYDRLEPWTH 78 + Y NF+ DR WTH Sbjct: 84 IRPRGYGENFATDRRGAWTH 103 >gi|254436509|ref|ZP_05050003.1| ETC complex I subunit conserved region superfamily [Octadecabacter antarcticus 307] gi|198251955|gb|EDY76269.1| ETC complex I subunit conserved region superfamily [Octadecabacter antarcticus 307] Length = 103 Score = 122 bits (306), Expect = 2e-26, Method: Composition-based stats. Identities = 27/80 (33%), Positives = 45/80 (56%), Gaps = 2/80 (2%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKE--S 58 +LEF + + ++PL+G+TSS D QV++ F +++AA YA+ +GI K + Sbjct: 24 VLEFAQTSAREVDPLMGWTSSSDMQTQVQMTFETMDAALDYAAANGIDASFQEPKKRRAN 83 Query: 59 QKELSYQRNFSYDRLEPWTH 78 + Y NF+ +R WTH Sbjct: 84 IRVGGYGENFATNRRGAWTH 103 >gi|329114566|ref|ZP_08243325.1| ETC Complex I Subunit Region [Acetobacter pomorum DM001] gi|326696046|gb|EGE47728.1| ETC Complex I Subunit Region [Acetobacter pomorum DM001] Length = 125 Score = 121 bits (305), Expect = 2e-26, Method: Composition-based stats. Identities = 29/78 (37%), Positives = 41/78 (52%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 + E+ + P L+G+T S D Q+ L+F S EAAE YA I Y V + ++ Sbjct: 48 VFEYGQSAPRKQSALMGWTGSADPQSQIHLYFDSREAAEAYAQREHIAYVVEETAPRMRR 107 Query: 61 ELSYQRNFSYDRLEPWTH 78 Y NF YDR++ WTH Sbjct: 108 PKVYADNFRYDRIQNWTH 125 >gi|146278912|ref|YP_001169071.1| ETC complex I subunit region [Rhodobacter sphaeroides ATCC 17025] gi|145557153|gb|ABP71766.1| ETC complex I subunit conserved region [Rhodobacter sphaeroides ATCC 17025] Length = 103 Score = 121 bits (304), Expect = 3e-26, Method: Composition-based stats. Identities = 33/80 (41%), Positives = 42/80 (52%), Gaps = 2/80 (2%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIP--SCKES 58 +L FE I+PL+G+TSS DT QV L F S EAA YA H I+ V + + Sbjct: 24 VLVFESREARDIDPLMGWTSSADTQNQVMLHFDSREAALDYAKAHRIEVEVTESKPRRPN 83 Query: 59 QKELSYQRNFSYDRLEPWTH 78 + Y NF+ DR WTH Sbjct: 84 IRPRGYGENFATDRRGAWTH 103 >gi|294676923|ref|YP_003577538.1| NDUFA4 family NADH ubiquinone oxidoreductase subunit [Rhodobacter capsulatus SB 1003] gi|294475743|gb|ADE85131.1| NADH ubiquinone oxidoreductase subunit, NDUFA4 family [Rhodobacter capsulatus SB 1003] Length = 103 Score = 120 bits (302), Expect = 7e-26, Method: Composition-based stats. Identities = 29/79 (36%), Positives = 43/79 (54%), Gaps = 2/79 (2%) Query: 2 LEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKES--Q 59 L+F + ++PL+G+T + DT QV+L F S EAAE +A G+ Y V K Sbjct: 25 LDFLQADARNLDPLMGWTGTDDTQAQVRLKFDSREAAEAFAKARGLDYTVTEGHKRKVNI 84 Query: 60 KELSYQRNFSYDRLEPWTH 78 + + Y NF+ +R WTH Sbjct: 85 RPMGYGENFATNRRANWTH 103 >gi|254294218|ref|YP_003060241.1| ETC complex I subunit conserved region [Hirschia baltica ATCC 49814] gi|254042749|gb|ACT59544.1| ETC complex I subunit conserved region [Hirschia baltica ATCC 49814] Length = 101 Score = 120 bits (301), Expect = 9e-26, Method: Composition-based stats. Identities = 28/78 (35%), Positives = 43/78 (55%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +LE + I+PL+G+TS+ T Q+++ F S E A YA G+++ V+ + Sbjct: 24 VLEMDVAASRSIDPLMGWTSTDSTETQLRMKFDSSEEAISYAKREGLEFTVVTPRAPKRI 83 Query: 61 ELSYQRNFSYDRLEPWTH 78 +Y NFS DR PWTH Sbjct: 84 IKTYAENFSADRKNPWTH 101 >gi|114799345|ref|YP_761265.1| putative NADH-quinone oxidoreductase [Hyphomonas neptunium ATCC 15444] gi|114739519|gb|ABI77644.1| putative NADH-quinone oxidoreductase [Hyphomonas neptunium ATCC 15444] Length = 102 Score = 119 bits (300), Expect = 1e-25, Method: Composition-based stats. Identities = 27/73 (36%), Positives = 38/73 (52%) Query: 6 KITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKELSYQ 65 +PL+G+TS DT Q++L F + E A YA G+ + V + + SY Sbjct: 30 PDAHRRPDPLMGWTSIDDTSGQIRLQFDTREQAIAYAEREGLNFRVEEPRERKRLVKSYA 89 Query: 66 RNFSYDRLEPWTH 78 NFS DR +PWTH Sbjct: 90 ENFSADRKQPWTH 102 >gi|92117654|ref|YP_577383.1| ETC complex I subunit region [Nitrobacter hamburgensis X14] gi|91800548|gb|ABE62923.1| ETC complex I subunit conserved region [Nitrobacter hamburgensis X14] Length = 102 Score = 119 bits (298), Expect = 2e-25, Method: Composition-based stats. Identities = 33/78 (42%), Positives = 45/78 (57%), Gaps = 1/78 (1%) Query: 2 LEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPS-CKESQK 60 L++E IEPL+G+TSS D QQ+ L F + E A Y GI Y VI K + + Sbjct: 25 LDYEPEQARVIEPLMGWTSSGDMKQQITLRFDTREDAIAYCEREGIPYEVIEPKVKAAAR 84 Query: 61 ELSYQRNFSYDRLEPWTH 78 + +Y NF++ R EPWTH Sbjct: 85 KAAYADNFAFRRSEPWTH 102 >gi|85708098|ref|ZP_01039164.1| NADH-ubiquinone oxidoreductase-related protein [Erythrobacter sp. NAP1] gi|85689632|gb|EAQ29635.1| NADH-ubiquinone oxidoreductase-related protein [Erythrobacter sp. NAP1] Length = 92 Score = 116 bits (292), Expect = 9e-25, Method: Composition-based stats. Identities = 28/69 (40%), Positives = 41/69 (59%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +LE+E+ +PL+G+T S DT QVKL FP+ +AA+ YA +GI V + +S K Sbjct: 24 VLEYEQSEARKPDPLMGWTGSGDTQAQVKLKFPTKDAAKAYAEKYGITARVHKTPPKSLK 83 Query: 61 ELSYQRNFS 69 +Y NF Sbjct: 84 IQAYADNFR 92 >gi|258542836|ref|YP_003188269.1| oxidoreductase [Acetobacter pasteurianus IFO 3283-01] gi|256633914|dbj|BAH99889.1| oxidoreductase [Acetobacter pasteurianus IFO 3283-01] gi|256636973|dbj|BAI02942.1| oxidoreductase [Acetobacter pasteurianus IFO 3283-03] gi|256640026|dbj|BAI05988.1| oxidoreductase [Acetobacter pasteurianus IFO 3283-07] gi|256643082|dbj|BAI09037.1| oxidoreductase [Acetobacter pasteurianus IFO 3283-22] gi|256646137|dbj|BAI12085.1| oxidoreductase [Acetobacter pasteurianus IFO 3283-26] gi|256649190|dbj|BAI15131.1| oxidoreductase [Acetobacter pasteurianus IFO 3283-32] gi|256652177|dbj|BAI18111.1| oxidoreductase [Acetobacter pasteurianus IFO 3283-01-42C] gi|256655234|dbj|BAI21161.1| oxidoreductase [Acetobacter pasteurianus IFO 3283-12] Length = 101 Score = 116 bits (292), Expect = 1e-24, Method: Composition-based stats. Identities = 29/78 (37%), Positives = 41/78 (52%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 + E+ + P L+G+T S D Q+ L+F S EAAE YA I Y V + ++ Sbjct: 24 VFEYGQSAPHKQSALMGWTGSADPQSQIHLYFDSREAAEAYAQREHIAYVVEETAPRMRR 83 Query: 61 ELSYQRNFSYDRLEPWTH 78 Y NF YDR++ WTH Sbjct: 84 PKVYADNFRYDRIQNWTH 101 >gi|114327590|ref|YP_744747.1| NADH-ubiquinone oxidoreductase 18 kDa subunit-like protein [Granulibacter bethesdensis CGDNIH1] gi|114315764|gb|ABI61824.1| NADH-ubiquinone oxidoreductase 18 kDa subunit-like protein [Granulibacter bethesdensis CGDNIH1] Length = 101 Score = 115 bits (288), Expect = 3e-24, Method: Composition-based stats. Identities = 24/78 (30%), Positives = 38/78 (48%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 ML + + L+G+ +T QV+L FP+ +AA YA +GI Y + + + Sbjct: 24 MLVYTAEQKRTPDALMGWIGGAETQTQVRLRFPTRDAAIAYADANGIDYEIETAHGRKVR 83 Query: 61 ELSYQRNFSYDRLEPWTH 78 Y NF + R+ WTH Sbjct: 84 PKQYSDNFRFGRIYNWTH 101 >gi|87199377|ref|YP_496634.1| ETC complex I subunit region [Novosphingobium aromaticivorans DSM 12444] gi|87135058|gb|ABD25800.1| ETC complex I subunit conserved region [Novosphingobium aromaticivorans DSM 12444] Length = 92 Score = 114 bits (287), Expect = 3e-24, Method: Composition-based stats. Identities = 30/69 (43%), Positives = 39/69 (56%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +LEFE +PL+G+ S DT QV L F +LE A+ YA+ HGI+ VIP+ K Sbjct: 24 LLEFEPAEARRPDPLMGWAGSGDTQSQVVLKFETLEEAQAYATRHGIEAHVIPTPPRKLK 83 Query: 61 ELSYQRNFS 69 SY NF Sbjct: 84 LQSYADNFR 92 >gi|296284713|ref|ZP_06862711.1| NADH-ubiquinone oxidoreductase-related protein [Citromicrobium bathyomarinum JL354] Length = 80 Score = 114 bits (286), Expect = 4e-24, Method: Composition-based stats. Identities = 28/69 (40%), Positives = 39/69 (56%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +LEFE+ +PL+G+T S DT QV L FPS + A+ YA +GI V + ++ K Sbjct: 12 VLEFEQSEARRPDPLMGWTGSGDTQAQVILTFPSKDEAKAYAEKYGIAARVHATPPKTLK 71 Query: 61 ELSYQRNFS 69 SY NF Sbjct: 72 LQSYADNFR 80 >gi|288958221|ref|YP_003448562.1| NADH dehydrogenase [ubiquinone] iron-sulfur protein 4 [Azospirillum sp. B510] gi|288910529|dbj|BAI72018.1| NADH dehydrogenase [ubiquinone] iron-sulfur protein 4 [Azospirillum sp. B510] Length = 98 Score = 114 bits (285), Expect = 5e-24, Method: Composition-based stats. Identities = 30/72 (41%), Positives = 40/72 (55%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 ML++E TP EPL+G+TSS DTL QV+L F + E A +A G Y V + + Sbjct: 24 MLDYEIETPRRPEPLMGWTSSGDTLNQVRLSFETKEEAIAFAEREGWTYSVQAAPVRRVR 83 Query: 61 ELSYQRNFSYDR 72 +Y NF DR Sbjct: 84 PRNYADNFRTDR 95 >gi|209964400|ref|YP_002297315.1| NADH-ubiquinone oxidoreductase subunit, putative [Rhodospirillum centenum SW] gi|209957866|gb|ACI98502.1| NADH-ubiquinone oxidoreductase subunit, putative [Rhodospirillum centenum SW] Length = 101 Score = 114 bits (285), Expect = 5e-24, Method: Composition-based stats. Identities = 32/72 (44%), Positives = 38/72 (52%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +LE+E TP EPL+G+ SS DTL QV+L F S EAA +A G V S Sbjct: 24 LLEYEIETPRRAEPLMGWISSGDTLNQVRLRFDSKEAAIAFAEKKGWACDVAESHTRRVT 83 Query: 61 ELSYQRNFSYDR 72 SY NF DR Sbjct: 84 PKSYADNFRSDR 95 >gi|23013997|ref|ZP_00053839.1| hypothetical protein Magn03008447 [Magnetospirillum magnetotacticum MS-1] Length = 102 Score = 114 bits (285), Expect = 5e-24, Method: Composition-based stats. Identities = 27/74 (36%), Positives = 39/74 (52%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +LE+E P + L+G+ S DT QV++ F + E A +A G+ Y V QK Sbjct: 25 VLEYEPAAPKQPDNLMGWVGSTDTTSQVRVKFATKEEAVAFAKKKGLDYSVAAENPRLQK 84 Query: 61 ELSYQRNFSYDRLE 74 +Y NF YD+LE Sbjct: 85 PKNYADNFRYDKLE 98 >gi|254796752|ref|YP_003081588.1| NADH:ubiquinone oxidoreductase 18 kda subunit [Neorickettsia risticii str. Illinois] gi|254589997|gb|ACT69359.1| NADH:ubiquinone oxidoreductase 18 kda subunit [Neorickettsia risticii str. Illinois] Length = 96 Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats. Identities = 31/68 (45%), Positives = 41/68 (60%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +L+F P Y+EPL+G+ S+DT+ Q+ L F S EAAE YA +GI Y VI + K Sbjct: 28 VLKFCSDEPKYVEPLMGWVGSRDTITQLVLKFNSREAAEAYAKKNGIDYTVIMPQQAKVK 87 Query: 61 ELSYQRNF 68 SY NF Sbjct: 88 PKSYADNF 95 >gi|254476646|ref|ZP_05090032.1| ETC complex I subunit conserved region [Ruegeria sp. R11] gi|214030889|gb|EEB71724.1| ETC complex I subunit conserved region [Ruegeria sp. R11] Length = 65 Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats. Identities = 28/65 (43%), Positives = 37/65 (56%), Gaps = 2/65 (3%) Query: 16 LGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSC--KESQKELSYQRNFSYDRL 73 +G+TSS DT QV+L F + EAA +YA HGI V K + + Y NF+ +R Sbjct: 1 MGWTSSSDTQSQVRLRFDTKEAALEYAEAHGIDAVVSEPKVRKANVRAGGYGENFATNRR 60 Query: 74 EPWTH 78 PWTH Sbjct: 61 GPWTH 65 >gi|296535524|ref|ZP_06897708.1| NADH-ubiquinone oxidoreductase [Roseomonas cervicalis ATCC 49957] gi|296264150|gb|EFH10591.1| NADH-ubiquinone oxidoreductase [Roseomonas cervicalis ATCC 49957] Length = 107 Score = 112 bits (282), Expect = 1e-23, Method: Composition-based stats. Identities = 33/79 (41%), Positives = 40/79 (50%), Gaps = 1/79 (1%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCK-ESQ 59 ML F +PL G+ S DT Q+++ F S EAAE YA + I Y V P + Sbjct: 29 MLVFAPAEARRQDPLTGWYGSGDTRAQLRISFASQEAAEAYARANNIPYEVEPPRPEAAL 88 Query: 60 KELSYQRNFSYDRLEPWTH 78 K SY NF Y R E WTH Sbjct: 89 KPKSYAENFRYGRAENWTH 107 >gi|88608591|ref|YP_506272.1| putative oxidoreductase [Neorickettsia sennetsu str. Miyayama] gi|88600760|gb|ABD46228.1| putative oxidoreductase [Neorickettsia sennetsu str. Miyayama] Length = 96 Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats. Identities = 29/68 (42%), Positives = 39/68 (57%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +L F P Y+EPL+G+ S+DT+ Q+ L F S E AE YA +GI Y V+ + K Sbjct: 28 VLRFCSEEPKYVEPLMGWVGSRDTITQLVLKFDSREVAEAYAKKNGIDYTVVMPQQAKVK 87 Query: 61 ELSYQRNF 68 SY NF Sbjct: 88 PKSYADNF 95 >gi|85373562|ref|YP_457624.1| NADH-ubiquinone oxidoreductase-related protein [Erythrobacter litoralis HTCC2594] gi|84786645|gb|ABC62827.1| NADH-ubiquinone oxidoreductase-related protein [Erythrobacter litoralis HTCC2594] Length = 92 Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats. Identities = 28/69 (40%), Positives = 39/69 (56%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +LEFE+ +PL+G+T S DT QV L FPS +AA+ YA +GI V + + K Sbjct: 24 VLEFEQSEARRPDPLMGWTGSGDTQAQVSLTFPSKDAAKAYAQKYGIPARVHATPPKGLK 83 Query: 61 ELSYQRNFS 69 +Y NF Sbjct: 84 LQAYADNFR 92 >gi|68171463|ref|ZP_00544850.1| ETC complex I subunit conserved region [Ehrlichia chaffeensis str. Sapulpa] gi|88657857|ref|YP_507036.1| putative oxidoreductase [Ehrlichia chaffeensis str. Arkansas] gi|67999124|gb|EAM85787.1| ETC complex I subunit conserved region [Ehrlichia chaffeensis str. Sapulpa] gi|88599314|gb|ABD44783.1| putative oxidoreductase [Ehrlichia chaffeensis str. Arkansas] Length = 104 Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats. Identities = 30/71 (42%), Positives = 36/71 (50%) Query: 2 LEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKE 61 LEFE Y EPL+ +T S DT QQV L F + E A YA H I Y V+ + Sbjct: 32 LEFEPSCTQYTEPLMNWTGSHDTKQQVCLSFTTRELAIAYAVAHKIDYTVLQDNPRTIVP 91 Query: 62 LSYQRNFSYDR 72 SY NF+ R Sbjct: 92 KSYADNFTKPR 102 >gi|103486010|ref|YP_615571.1| ETC complex I subunit region [Sphingopyxis alaskensis RB2256] gi|98976087|gb|ABF52238.1| ETC complex I subunit conserved region [Sphingopyxis alaskensis RB2256] Length = 92 Score = 110 bits (277), Expect = 5e-23, Method: Composition-based stats. Identities = 26/69 (37%), Positives = 36/69 (52%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 MLEF +PL+G+ S DT +Q++L F S E A YA +GI V+P+ K Sbjct: 24 MLEFAPAEARKPDPLMGWAGSGDTQRQLRLSFASREEAVAYAEKYGIDAEVMPTPVRKLK 83 Query: 61 ELSYQRNFS 69 +Y NF Sbjct: 84 IQAYADNFR 92 >gi|149186798|ref|ZP_01865108.1| NADH-ubiquinone oxidoreductase-related protein [Erythrobacter sp. SD-21] gi|148829465|gb|EDL47906.1| NADH-ubiquinone oxidoreductase-related protein [Erythrobacter sp. SD-21] Length = 92 Score = 110 bits (275), Expect = 9e-23, Method: Composition-based stats. Identities = 28/69 (40%), Positives = 39/69 (56%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +LEFE+ +PL+G+T S DT QV+L FPS + A+ YA +GI V + S K Sbjct: 24 VLEFEQSEARQADPLMGWTGSGDTQAQVQLNFPSKDEAKAYAEKYGIAARVHATPPHSLK 83 Query: 61 ELSYQRNFS 69 +Y NF Sbjct: 84 LQAYADNFR 92 >gi|307294475|ref|ZP_07574317.1| ETC complex I subunit conserved region [Sphingobium chlorophenolicum L-1] gi|306878949|gb|EFN10167.1| ETC complex I subunit conserved region [Sphingobium chlorophenolicum L-1] Length = 92 Score = 109 bits (274), Expect = 1e-22, Method: Composition-based stats. Identities = 28/69 (40%), Positives = 37/69 (53%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +LE+ +PL G+ S D QQ+KL F S EAA YA GI Y VIP+ ++ K Sbjct: 24 VLEYAPAEAKKPDPLTGWAGSGDMKQQIKLSFSSEEAARAYAEREGIAYTVIPTAPKTLK 83 Query: 61 ELSYQRNFS 69 +Y NF Sbjct: 84 IQAYADNFR 92 >gi|73667404|ref|YP_303420.1| ETC complex I subunit region [Ehrlichia canis str. Jake] gi|72394545|gb|AAZ68822.1| ETC complex I subunit conserved region [Ehrlichia canis str. Jake] Length = 97 Score = 109 bits (274), Expect = 1e-22, Method: Composition-based stats. Identities = 31/71 (43%), Positives = 40/71 (56%) Query: 2 LEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKE 61 LEFE YIEPL+ +T S DT QQ++LFF + E A YA H I Y V+ + + Sbjct: 25 LEFEPSCTQYIEPLMKWTGSHDTRQQIRLFFKTKELAIAYAIAHNIDYIVLQNNSRTTSA 84 Query: 62 LSYQRNFSYDR 72 SY NF+ R Sbjct: 85 KSYASNFTRLR 95 >gi|94497267|ref|ZP_01303839.1| NADH-ubiquinone oxidoreductase-related protein [Sphingomonas sp. SKA58] gi|94423372|gb|EAT08401.1| NADH-ubiquinone oxidoreductase-related protein [Sphingomonas sp. SKA58] Length = 117 Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats. Identities = 26/69 (37%), Positives = 38/69 (55%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +LEF + +PL G+ S DT QVKL F + +AA YA +GI Y +I + ++ K Sbjct: 49 VLEFAQAEAKMPDPLTGWAGSGDTQSQVKLTFATQDAAIAYADKYGIAYTLIATPPKTLK 108 Query: 61 ELSYQRNFS 69 +Y NF Sbjct: 109 IQAYADNFR 117 >gi|144899130|emb|CAM75994.1| NADH-ubiquinone oxidoreductase family protein [Magnetospirillum gryphiswaldense MSR-1] Length = 102 Score = 108 bits (271), Expect = 2e-22, Method: Composition-based stats. Identities = 27/75 (36%), Positives = 41/75 (54%), Gaps = 1/75 (1%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVI-PSCKESQ 59 +LE+E +PL+G+ S DT QQV++ F S E A YA G+ + V + K+ Sbjct: 24 VLEYEPAARKDADPLMGWLGSDDTTQQVRIKFASKEEAVAYAKRKGLDFQVFAEAAKKPV 83 Query: 60 KELSYQRNFSYDRLE 74 +Y NF +D+LE Sbjct: 84 GAKNYSDNFRFDKLE 98 >gi|56416429|ref|YP_153503.1| hypothetical protein AM093 [Anaplasma marginale str. St. Maries] gi|222474799|ref|YP_002563214.1| hypothetical protein AMF_067 [Anaplasma marginale str. Florida] gi|56387661|gb|AAV86248.1| hypothetical protein AM093 [Anaplasma marginale str. St. Maries] gi|222418935|gb|ACM48958.1| Conserved hypothetical protein [Anaplasma marginale str. Florida] Length = 106 Score = 108 bits (270), Expect = 3e-22, Method: Composition-based stats. Identities = 30/71 (42%), Positives = 39/71 (54%) Query: 2 LEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKE 61 +EFE Y + L+G+ SKDT QQV+L FP+ E A YA GI Y V+ +K Sbjct: 34 MEFEPSCSRYRDSLMGWVGSKDTAQQVRLHFPNKEDAISYAKARGILYVVLQDQATRKKP 93 Query: 62 LSYQRNFSYDR 72 SY NF +R Sbjct: 94 KSYSENFFKNR 104 >gi|254994661|ref|ZP_05276851.1| hypothetical protein AmarM_00353 [Anaplasma marginale str. Mississippi] gi|255002768|ref|ZP_05277732.1| hypothetical protein AmarPR_00343 [Anaplasma marginale str. Puerto Rico] gi|255003902|ref|ZP_05278703.1| hypothetical protein AmarV_00363 [Anaplasma marginale str. Virginia] Length = 96 Score = 108 bits (270), Expect = 3e-22, Method: Composition-based stats. Identities = 30/71 (42%), Positives = 39/71 (54%) Query: 2 LEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKE 61 +EFE Y + L+G+ SKDT QQV+L FP+ E A YA GI Y V+ +K Sbjct: 24 MEFEPSCSRYRDSLMGWVGSKDTAQQVRLHFPNKEDAISYAKARGILYVVLQDQATRKKP 83 Query: 62 LSYQRNFSYDR 72 SY NF +R Sbjct: 84 KSYSENFFKNR 94 >gi|88607239|ref|YP_504709.1| putative oxidoreductase [Anaplasma phagocytophilum HZ] gi|88598302|gb|ABD43772.1| putative oxidoreductase [Anaplasma phagocytophilum HZ] Length = 102 Score = 108 bits (270), Expect = 3e-22, Method: Composition-based stats. Identities = 29/71 (40%), Positives = 40/71 (56%) Query: 2 LEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKE 61 +EFE Y+E L+G+T S++TLQQV++ F S E A Y HGI Y ++ S+ Sbjct: 30 VEFEPSRSQYVEGLMGWTGSEETLQQVRMCFGSKEDAIAYVEAHGIPYILLQDATASRVP 89 Query: 62 LSYQRNFSYDR 72 SY NF R Sbjct: 90 KSYATNFLRKR 100 >gi|57239483|ref|YP_180619.1| putative NADH-ubiquinone oxidoreductase subunit [Ehrlichia ruminantium str. Welgevonden] gi|58579461|ref|YP_197673.1| putative NADH-ubiquinone oxidoreductase subunit [Ehrlichia ruminantium str. Welgevonden] gi|58617515|ref|YP_196714.1| putative NADH-ubiquinone oxidoreductase subunit [Ehrlichia ruminantium str. Gardel] gi|57161562|emb|CAH58489.1| putative NADH-ubiquinone oxidoreductase [Ehrlichia ruminantium str. Welgevonden] gi|58417127|emb|CAI28240.1| Putative NADH-ubiquinone oxidoreductase subunit [Ehrlichia ruminantium str. Gardel] gi|58418087|emb|CAI27291.1| Putative NADH-ubiquinone oxidoreductase subunit [Ehrlichia ruminantium str. Welgevonden] Length = 97 Score = 106 bits (266), Expect = 9e-22, Method: Composition-based stats. Identities = 30/71 (42%), Positives = 41/71 (57%) Query: 2 LEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKE 61 LEF YIEPL+ +T S DT+QQV LFF + E A YA+ H I++ V+ ++ Sbjct: 25 LEFGPSNTQYIEPLMQWTGSCDTMQQVSLFFATKEQAIAYANAHNIKHIVLQEYSQTIAP 84 Query: 62 LSYQRNFSYDR 72 SY NF+ R Sbjct: 85 KSYADNFTRLR 95 >gi|332188681|ref|ZP_08390396.1| ETC complex I subunit conserved region family protein [Sphingomonas sp. S17] gi|332011298|gb|EGI53388.1| ETC complex I subunit conserved region family protein [Sphingomonas sp. S17] Length = 93 Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats. Identities = 26/68 (38%), Positives = 38/68 (55%) Query: 2 LEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKE 61 LEFE +PL G+ S DT +QV+L F +LE A Y G+ + V+P+ +++ K Sbjct: 26 LEFEPTEAKQPDPLTGWAGSGDTREQVRLTFATLEEAIAYCQREGLDHHVVPTPQKTLKL 85 Query: 62 LSYQRNFS 69 SY NF Sbjct: 86 QSYADNFR 93 >gi|289607240|emb|CBI60853.1| unnamed protein product [Sordaria macrospora] Length = 110 Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats. Identities = 32/69 (46%), Positives = 41/69 (59%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 MLEFE P +PL G+ S DT +QVKL FPSL+AA YA GI + V+P+ + K Sbjct: 42 MLEFEPAEPKQADPLTGWAGSGDTREQVKLRFPSLDAATDYAKREGIDFHVVPAPERKLK 101 Query: 61 ELSYQRNFS 69 +Y NF Sbjct: 102 LQAYADNFK 110 >gi|23006540|ref|ZP_00048813.1| hypothetical protein Magn03002027 [Magnetospirillum magnetotacticum MS-1] Length = 64 Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats. Identities = 27/64 (42%), Positives = 37/64 (57%), Gaps = 1/64 (1%) Query: 16 LGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKE-SQKELSYQRNFSYDRLE 74 + +T S D LQQV+L F + + A YA GI Y V + ++K LSY NF ++R Sbjct: 1 MAWTGSSDMLQQVRLEFDTADEAVAYAKSAGIAYRVEETPPPIARKGLSYSDNFKFNRTA 60 Query: 75 PWTH 78 PWTH Sbjct: 61 PWTH 64 >gi|294012757|ref|YP_003546217.1| putative oxidoreductase [Sphingobium japonicum UT26S] gi|292676087|dbj|BAI97605.1| putative oxidoreductase [Sphingobium japonicum UT26S] Length = 92 Score = 105 bits (264), Expect = 2e-21, Method: Composition-based stats. Identities = 28/69 (40%), Positives = 38/69 (55%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +LE+ +PL G+ S DT QQ++L F S EAA YA GI Y VIP+ ++ K Sbjct: 24 VLEYVAAEAKKPDPLTGWAGSGDTKQQIRLTFSSEEAARAYAEREGIAYAVIPTAPKTLK 83 Query: 61 ELSYQRNFS 69 +Y NF Sbjct: 84 IQAYADNFR 92 >gi|296535582|ref|ZP_06897763.1| NADH-ubiquinone oxidoreductase [Roseomonas cervicalis ATCC 49957] gi|296264098|gb|EFH10542.1| NADH-ubiquinone oxidoreductase [Roseomonas cervicalis ATCC 49957] Length = 158 Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats. Identities = 27/82 (32%), Positives = 39/82 (47%), Gaps = 6/82 (7%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +LEF PP +PL G+ S D L Q++L FP E+A +A HG + V+ + Sbjct: 40 LLEFPPSAPPLRDPLTGWIGSADPLAQLRLRFPDRESAVAFAERHGWPHEVVEPAPRGLR 99 Query: 61 ELSYQRNFSYD------RLEPW 76 SY D R++PW Sbjct: 100 YRSYAEQLRCDLSGAIARVQPW 121 >gi|269959155|ref|YP_003328944.1| putative oxidoreductase [Anaplasma centrale str. Israel] gi|269848986|gb|ACZ49630.1| putative oxidoreductase [Anaplasma centrale str. Israel] Length = 104 Score = 105 bits (262), Expect = 3e-21, Method: Composition-based stats. Identities = 30/72 (41%), Positives = 41/72 (56%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 ++EFE Y + L+G+ S+DT QQ+KL F S EAA YA GI Y V+P ++ Sbjct: 31 LMEFEPSCSLYRDSLMGWVGSRDTAQQIKLRFSSREAAISYAETRGISYVVLPEQATRKQ 90 Query: 61 ELSYQRNFSYDR 72 SY NF +R Sbjct: 91 PKSYSENFLRNR 102 >gi|148556352|ref|YP_001263934.1| ETC complex I subunit [Sphingomonas wittichii RW1] gi|148501542|gb|ABQ69796.1| ETC complex I subunit conserved region [Sphingomonas wittichii RW1] Length = 112 Score = 104 bits (261), Expect = 3e-21, Method: Composition-based stats. Identities = 27/68 (39%), Positives = 38/68 (55%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +LE+E +PL G+ S DT QV+L FPSLEAA+ YA G+ V+ + + K Sbjct: 38 VLEYEPTEAKRPDPLTGWAGSGDTRGQVRLSFPSLEAAKAYADREGLTAHVVAGPERTLK 97 Query: 61 ELSYQRNF 68 +Y NF Sbjct: 98 LQAYADNF 105 >gi|83592981|ref|YP_426733.1| ETC complex I subunit region [Rhodospirillum rubrum ATCC 11170] gi|83575895|gb|ABC22446.1| ETC complex I subunit conserved region [Rhodospirillum rubrum ATCC 11170] Length = 99 Score = 99.4 bits (247), Expect = 1e-19, Method: Composition-based stats. Identities = 24/73 (32%), Positives = 36/73 (49%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +LEFE + L+G+ S D Q++LFF + + AE YA G Y + K Sbjct: 26 VLEFEPTEKKVHDDLMGWVGSGDMNGQLRLFFATRKDAESYAKRKGFTYTAQDANPRVIK 85 Query: 61 ELSYQRNFSYDRL 73 SY NF+Y ++ Sbjct: 86 PKSYSDNFAYHKI 98 >gi|321478677|gb|EFX89634.1| hypothetical protein DAPPUDRAFT_205866 [Daphnia pulex] Length = 188 Score = 98.2 bits (244), Expect = 3e-19, Method: Composition-based stats. Identities = 22/72 (30%), Positives = 37/72 (51%), Gaps = 1/72 (1%) Query: 2 LEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKE 61 +EFE + PL+G+ SS D L ++L F + E A + +G Y V ++ + Sbjct: 112 MEFESRE-RWENPLMGWASSGDPLSNMQLSFGNKEEAIAFCEKNGWDYSVNEVVEKQPRP 170 Query: 62 LSYQRNFSYDRL 73 SY NFS+++ Sbjct: 171 KSYGINFSWNKK 182 >gi|326385520|ref|ZP_08207159.1| ETC complex I subunit region [Novosphingobium nitrogenifigens DSM 19370] gi|326210059|gb|EGD60837.1| ETC complex I subunit region [Novosphingobium nitrogenifigens DSM 19370] Length = 94 Score = 98.2 bits (244), Expect = 3e-19, Method: Composition-based stats. Identities = 26/69 (37%), Positives = 33/69 (47%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +LEF +PL G+ S DT QQV L F S A YA +GI+ + P+ K Sbjct: 26 LLEFAPAEAKKPDPLTGWAGSGDTQQQVVLRFGSEAEARAYADRYGIEVHITPTPPRRLK 85 Query: 61 ELSYQRNFS 69 SY NF Sbjct: 86 LQSYADNFR 94 >gi|242015736|ref|XP_002428503.1| NADH-ubiquinone oxidoreductase 18 kDa subunit, putative [Pediculus humanus corporis] gi|212513137|gb|EEB15765.1| NADH-ubiquinone oxidoreductase 18 kDa subunit, putative [Pediculus humanus corporis] Length = 156 Score = 97.9 bits (243), Expect = 4e-19, Method: Composition-based stats. Identities = 26/72 (36%), Positives = 41/72 (56%), Gaps = 1/72 (1%) Query: 2 LEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKE 61 LEFE P + PL+G++S+ D L +KL FP E+A +YA + ++ + K K Sbjct: 80 LEFE-TRPRWENPLMGWSSTGDPLSNMKLSFPDKESAIRYAEKNKYKWYLDSEKKTKPKV 138 Query: 62 LSYQRNFSYDRL 73 SY NFS+++ Sbjct: 139 KSYGFNFSWNKR 150 >gi|310815601|ref|YP_003963565.1| ETC complex I subunit conserved region [Ketogulonicigenium vulgare Y25] gi|308754336|gb|ADO42265.1| ETC complex I subunit conserved region [Ketogulonicigenium vulgare Y25] Length = 103 Score = 97.5 bits (242), Expect = 6e-19, Method: Composition-based stats. Identities = 29/80 (36%), Positives = 48/80 (60%), Gaps = 2/80 (2%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQ- 59 +LE++ P I+PL+G+ DT Q++L F +L+AA YA+ H I +P+ + + Sbjct: 24 VLEWDASAAPQIDPLMGWIGHGDTQSQMRLQFETLDAALAYAAAHDIDVVTLPTQERAPQ 83 Query: 60 -KELSYQRNFSYDRLEPWTH 78 + L Y NF+ +R EPW+H Sbjct: 84 LRSLGYGENFATNRREPWSH 103 >gi|66472400|ref|NP_001018512.1| NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial [Danio rerio] gi|63102519|gb|AAH95734.1| NADH dehydrogenase (ubiquinone) Fe-S protein 4, (NADH-coenzyme Q reductase) [Danio rerio] gi|148725265|emb|CAN87837.1| novel protein similar to vertebrate NADH dehydrogenase (ubiquinone) Fe-S protein 4 (NDUFS4) (zgc:112289) [Danio rerio] gi|148725302|emb|CAN87941.1| novel protein (zgc:112289) [Danio rerio] gi|160774021|gb|AAI55232.1| NADH dehydrogenase (ubiquinone) Fe-S protein 4, (NADH-coenzyme Q reductase) [Danio rerio] Length = 168 Score = 94.8 bits (235), Expect = 3e-18, Method: Composition-based stats. Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 1/71 (1%) Query: 3 EFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKEL 62 +F+ + PL+G++S+ D L + L F + E A +A +G Y + + Sbjct: 93 DFDTRE-RWENPLMGWSSTADPLSNMVLTFSTKEDAIAFAEKNGWSYDITEKRVPKPRVK 151 Query: 63 SYQRNFSYDRL 73 SY NFS+DR Sbjct: 152 SYGANFSWDRR 162 >gi|115728561|ref|XP_788085.2| PREDICTED: similar to mitochondrial complex I subunit NDUFS4 [Strongylocentrotus purpuratus] gi|115926688|ref|XP_001189274.1| PREDICTED: similar to mitochondrial complex I subunit NDUFS4 [Strongylocentrotus purpuratus] Length = 847 Score = 94.8 bits (235), Expect = 3e-18, Method: Composition-based stats. Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 1/72 (1%) Query: 2 LEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKE 61 LEF+ + PL+G+ S+ D L V + F + E A ++A +G +Y V+ + Sbjct: 771 LEFDTRE-RWENPLMGWGSTADPLSNVDVSFRTKEEAMRFAEKNGWKYEVMEPQVSKPRA 829 Query: 62 LSYQRNFSYDRL 73 SY NFS+D+ Sbjct: 830 KSYGANFSWDKK 841 >gi|311273704|ref|XP_003134000.1| PREDICTED: NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial-like [Sus scrofa] Length = 168 Score = 94.8 bits (235), Expect = 4e-18, Method: Composition-based stats. Identities = 21/72 (29%), Positives = 36/72 (50%), Gaps = 1/72 (1%) Query: 2 LEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKE 61 +EF+ + PL+G++S+ D L + L F + E A +A +G + V K Sbjct: 92 MEFDTRE-RWENPLMGWSSTADPLSNLVLTFSTKEDAVAFAEKNGWSFDVEERKVPKPKS 150 Query: 62 LSYQRNFSYDRL 73 SY NFS+++ Sbjct: 151 KSYGANFSWNKR 162 >gi|254455881|ref|ZP_05069310.1| ETC complex I subunit conserved region [Candidatus Pelagibacter sp. HTCC7211] gi|207082883|gb|EDZ60309.1| ETC complex I subunit conserved region [Candidatus Pelagibacter sp. HTCC7211] Length = 93 Score = 94.0 bits (233), Expect = 6e-18, Method: Composition-based stats. Identities = 27/68 (39%), Positives = 36/68 (52%), Gaps = 1/68 (1%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +LEF + P PL+G+ SS DTL ++KL F S E A YA I + +I K Sbjct: 25 ILEF-RTKDPTKNPLMGWESSSDTLTELKLEFSSKELAINYAKKKKIDFELIEPKKRKTV 83 Query: 61 ELSYQRNF 68 + SY NF Sbjct: 84 KKSYADNF 91 >gi|291395339|ref|XP_002714016.1| PREDICTED: NADH dehydrogenase (ubiquinone) Fe-S protein 4 [Oryctolagus cuniculus] Length = 313 Score = 93.2 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 1/72 (1%) Query: 2 LEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKE 61 +EF+ + PL+G+ S+ D L + L F + E A +A +G Y V K Sbjct: 237 MEFDTRE-RWENPLMGWASTADPLSNMVLTFSAKEDAVAFAEKNGWSYDVEERKVPKPKS 295 Query: 62 LSYQRNFSYDRL 73 SY NFS+++ Sbjct: 296 KSYGANFSWNKR 307 >gi|320162901|gb|EFW39800.1| NADH-ubiquinone oxidoreductase IP subunit [Capsaspora owczarzaki ATCC 30864] Length = 191 Score = 93.2 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 26/72 (36%), Positives = 38/72 (52%), Gaps = 1/72 (1%) Query: 2 LEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKE 61 L+FE + PL+G+ SS D LQ + L F +LEAA +A +G Y V ++ Sbjct: 115 LDFEVPE-RWENPLMGWASSGDPLQALDLEFDTLEAAIAFAEKNGWGYSVDEKIPPVRRI 173 Query: 62 LSYQRNFSYDRL 73 SY NFS+ + Sbjct: 174 KSYGANFSWSKR 185 >gi|241835856|ref|XP_002415077.1| NADH dehydrogenase, putative [Ixodes scapularis] gi|215509289|gb|EEC18742.1| NADH dehydrogenase, putative [Ixodes scapularis] Length = 190 Score = 92.9 bits (230), Expect = 1e-17, Method: Composition-based stats. Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 1/72 (1%) Query: 2 LEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKE 61 +EF+ + PL+G+ SS D L V + F S EAA + +G Y V Sbjct: 114 MEFDNRE-RWENPLMGWCSSGDPLSNVNVNFSSKEAAMSFCEKNGWDYFVDEPAPRRSPR 172 Query: 62 LSYQRNFSYDRL 73 +Y NFS+++ Sbjct: 173 KNYGDNFSWNKR 184 >gi|115533653|ref|NP_491359.2| LiPid Depleted family member (lpd-5) [Caenorhabditis elegans] gi|89179498|gb|AAF40003.2| Lipid depleted protein 5 [Caenorhabditis elegans] Length = 176 Score = 92.5 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 17/66 (25%), Positives = 32/66 (48%), Gaps = 2/66 (3%) Query: 10 PYIEPLLGYTSSKDTLQQV--KLFFPSLEAAEKYASDHGIQYCVIPSCKESQKELSYQRN 67 + PL+G++ + D L V L F + E A + + ++ V + K +Y +N Sbjct: 105 RWENPLMGWSGTADPLSNVGMDLKFATKEDAIAFCEKNRWEFDVEEPHERKIKPKNYGQN 164 Query: 68 FSYDRL 73 FS++R Sbjct: 165 FSWNRR 170 >gi|332030052|gb|EGI69877.1| NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial [Acromyrmex echinatior] Length = 186 Score = 92.5 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 21/72 (29%), Positives = 36/72 (50%), Gaps = 1/72 (1%) Query: 2 LEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKE 61 ++F+ + PL+G+TSS D + +K+ F + E A + G +Y V K Sbjct: 110 MDFDTRE-RWENPLMGWTSSGDPMSNIKVDFATKEEAIAHCKKMGWEYYVQKPNVSQPKP 168 Query: 62 LSYQRNFSYDRL 73 SY NFS+++ Sbjct: 169 RSYGSNFSWNKR 180 >gi|27380333|ref|NP_771862.1| hypothetical protein blr5222 [Bradyrhizobium japonicum USDA 110] gi|3087773|emb|CAA05838.1| OrfG [Bradyrhizobium japonicum] gi|27353497|dbj|BAC50487.1| blr5222 [Bradyrhizobium japonicum USDA 110] Length = 238 Score = 92.5 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 30/66 (45%), Positives = 37/66 (56%) Query: 2 LEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKE 61 L FE+ + PYIEPL+G+T D L QV+L FPS EAA YA G+QY V + K Sbjct: 56 LRFERRSAPYIEPLMGWTGDDDPLSQVELSFPSAEAAIAYARRQGLQYSVEGLPAQGAKP 115 Query: 62 LSYQRN 67 N Sbjct: 116 RLISDN 121 >gi|149408414|ref|XP_001507034.1| PREDICTED: similar to NADH:ubiquinone oxidoreductase 18 kDa IP subunit [Ornithorhynchus anatinus] Length = 372 Score = 92.5 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 1/72 (1%) Query: 2 LEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKE 61 +EF+ + PL+G+ S+ D L + LFF + E A +A +G Y V K Sbjct: 296 MEFDTRE-RWENPLMGWASTADPLSNMTLFFKTKEEAVAFAEKNGWSYDVQERRIPKPKS 354 Query: 62 LSYQRNFSYDRL 73 SY NFS+++ Sbjct: 355 KSYGANFSWNKR 366 >gi|28461229|ref|NP_786994.1| NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial precursor [Bos taurus] gi|400578|sp|Q02375|NDUS4_BOVIN RecName: Full=NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial; AltName: Full=Complex I-18 kDa; Short=CI-18 kDa; AltName: Full=Complex I-AQDQ; Short=CI-AQDQ; AltName: Full=NADH-ubiquinone oxidoreductase 18 kDa subunit; Flags: Precursor gi|226|emb|CAA44900.1| NADH dehydrogenase [Bos taurus] gi|296475810|gb|DAA17925.1| NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial precursor [Bos taurus] Length = 175 Score = 92.1 bits (228), Expect = 2e-17, Method: Composition-based stats. Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 1/72 (1%) Query: 2 LEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKE 61 +EF+ + PL+G+ S+ D L + L F + E A +A +G Y V K Sbjct: 99 MEFDTRE-RWENPLMGWASTADPLSNLVLTFSTKEDAVAFAEKNGWSYDVEERKVPKPKS 157 Query: 62 LSYQRNFSYDRL 73 SY NFS+++ Sbjct: 158 KSYGANFSWNKR 169 >gi|82084052|sp|Q66XS7|NDUS4_GECJA RecName: Full=NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial; AltName: Full=Complex I-18 kDa; Short=CI-18 kDa; AltName: Full=NADH-ubiquinone oxidoreductase 18 kDa subunit; Flags: Precursor gi|51537261|gb|AAU05732.1| GekBS037P [Gekko japonicus] Length = 175 Score = 92.1 bits (228), Expect = 2e-17, Method: Composition-based stats. Identities = 21/72 (29%), Positives = 36/72 (50%), Gaps = 1/72 (1%) Query: 2 LEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKE 61 +EF+ + PL+G++S+ D L + L F + E A +A +G + V K Sbjct: 99 MEFDTRE-RWENPLMGWSSTADPLSNLVLTFSTKEDAVAFAEKNGWSFDVEERKVPKPKS 157 Query: 62 LSYQRNFSYDRL 73 SY NFS+++ Sbjct: 158 KSYGANFSWNKR 169 >gi|221120275|ref|XP_002157726.1| PREDICTED: similar to LOC100125122 protein [Hydra magnipapillata] Length = 168 Score = 92.1 bits (228), Expect = 2e-17, Method: Composition-based stats. Identities = 21/64 (32%), Positives = 32/64 (50%) Query: 10 PYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKELSYQRNFS 69 + PL+G+ SS D L +L F + EAA +Y HG + V + SY NFS Sbjct: 99 RWENPLMGWASSGDPLSNTQLQFSTREAAIQYCKSHGWNHEVEEPTLPKFRPKSYGSNFS 158 Query: 70 YDRL 73 +++ Sbjct: 159 WNKR 162 >gi|194223898|ref|XP_001494544.2| PREDICTED: similar to NADH dehydrogenase [Equus caballus] Length = 170 Score = 92.1 bits (228), Expect = 3e-17, Method: Composition-based stats. Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 1/72 (1%) Query: 2 LEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKE 61 +EF+ + PL+G+ S+ D L + L F + E A +A +G Y V K Sbjct: 94 MEFDTRE-RWENPLMGWASTADPLSNMVLTFSTKEDAVAFAEKNGWSYDVEERKVPKPKS 152 Query: 62 LSYQRNFSYDRL 73 SY NFS+++ Sbjct: 153 KSYGANFSWNKR 164 >gi|225717194|gb|ACO14443.1| NADH dehydrogenase iron-sulfur protein 4, mitochondrial precursor [Esox lucius] Length = 170 Score = 91.7 bits (227), Expect = 3e-17, Method: Composition-based stats. Identities = 21/72 (29%), Positives = 37/72 (51%), Gaps = 1/72 (1%) Query: 2 LEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKE 61 ++F+ + PL+G+ S+ D + V L F S E A +A +G Y + ++ + Sbjct: 94 MDFDTRE-RWENPLMGWASTADPMSNVNLTFSSKEDAIDFAEKNGWSYDITEKMEKKPRA 152 Query: 62 LSYQRNFSYDRL 73 SY NFS+D+ Sbjct: 153 KSYGANFSWDKR 164 >gi|301623547|ref|XP_002941076.1| PREDICTED: NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial isoform 2 [Xenopus (Silurana) tropicalis] Length = 165 Score = 91.3 bits (226), Expect = 4e-17, Method: Composition-based stats. Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 1/71 (1%) Query: 3 EFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKEL 62 EF+ + PL+G+ S+ D L + L F S E A +A +G Y V K Sbjct: 90 EFDTRE-RWENPLMGWASTADPLSNMLLSFSSKEDAISFAEKNGWSYEVEEKRIPKPKSK 148 Query: 63 SYQRNFSYDRL 73 SY NFS+++ Sbjct: 149 SYGANFSWNKR 159 >gi|190571324|ref|YP_001975682.1| oxidoreductase, putative [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|213018720|ref|ZP_03334528.1| oxidoreductase, putative [Wolbachia endosymbiont of Culex quinquefasciatus JHB] gi|190357596|emb|CAQ55037.1| oxidoreductase, putative [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|212995671|gb|EEB56311.1| oxidoreductase, putative [Wolbachia endosymbiont of Culex quinquefasciatus JHB] Length = 99 Score = 90.9 bits (225), Expect = 5e-17, Method: Composition-based stats. Identities = 26/67 (38%), Positives = 34/67 (50%), Gaps = 1/67 (1%) Query: 2 LEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKE 61 L+ E YIEPL+G+ SKD +Q+ L F SLE A YA H +Y + + Sbjct: 31 LKIEP-CSYYIEPLMGWVGSKDPQKQIVLKFDSLEKAISYAKKHNTKYTIEMPKDVKRLP 89 Query: 62 LSYQRNF 68 SY NF Sbjct: 90 KSYANNF 96 >gi|262277197|ref|ZP_06054990.1| NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, precursor [alpha proteobacterium HIMB114] gi|262224300|gb|EEY74759.1| NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, precursor [alpha proteobacterium HIMB114] Length = 96 Score = 90.5 bits (224), Expect = 6e-17, Method: Composition-based stats. Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 1/68 (1%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +L+F+K+ Y + L+ +TSS DT QV L F + + A YA + I++ +I K Sbjct: 28 ILKFDKVKSGY-DHLMNWTSSFDTQSQVSLLFETKKQAIDYAKKYNIEFEIIEPKKNKLI 86 Query: 61 ELSYQRNF 68 SY NF Sbjct: 87 IKSYADNF 94 >gi|47226576|emb|CAG08592.1| unnamed protein product [Tetraodon nigroviridis] Length = 170 Score = 90.5 bits (224), Expect = 7e-17, Method: Composition-based stats. Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 1/72 (1%) Query: 2 LEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKE 61 ++F+ + PL+G+ S+ D L + L F S E A +A +G Y + + Sbjct: 94 MDFDTRE-RWENPLMGWASTADPLSNMVLSFSSKEDAVAFAEKNGWSYDITEKRSPKPRV 152 Query: 62 LSYQRNFSYDRL 73 SY NFS+D+ Sbjct: 153 KSYGANFSWDKR 164 >gi|301623545|ref|XP_002941075.1| PREDICTED: NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial isoform 1 [Xenopus (Silurana) tropicalis] Length = 169 Score = 90.2 bits (223), Expect = 8e-17, Method: Composition-based stats. Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 1/71 (1%) Query: 3 EFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKEL 62 EF+ + PL+G+ S+ D L + L F S E A +A +G Y V K Sbjct: 94 EFDTRE-RWENPLMGWASTADPLSNMLLSFSSKEDAISFAEKNGWSYEVEEKRIPKPKSK 152 Query: 63 SYQRNFSYDRL 73 SY NFS+++ Sbjct: 153 SYGANFSWNKR 163 >gi|138519830|gb|AAI35162.1| LOC100125122 protein [Xenopus (Silurana) tropicalis] gi|187469134|gb|AAI66936.1| LOC100125122 protein [Xenopus (Silurana) tropicalis] Length = 168 Score = 90.2 bits (223), Expect = 8e-17, Method: Composition-based stats. Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 1/71 (1%) Query: 3 EFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKEL 62 EF+ + PL+G+ S+ D L + L F S E A +A +G Y V K Sbjct: 93 EFDTRE-RWENPLMGWASTADPLSNMLLSFSSKEDAISFAEKNGWSYEVEEKRIPKPKSK 151 Query: 63 SYQRNFSYDRL 73 SY NFS+++ Sbjct: 152 SYGANFSWNKR 162 >gi|291233485|ref|XP_002736684.1| PREDICTED: NADH dehydrogenase (ubiquinone) Fe-S protein 4-like [Saccoglossus kowalevskii] Length = 170 Score = 90.2 bits (223), Expect = 9e-17, Method: Composition-based stats. Identities = 26/71 (36%), Positives = 40/71 (56%), Gaps = 1/71 (1%) Query: 3 EFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKEL 62 EF+ + PL+G++SS D L + + F S EAA K+A +G +Y V + + K Sbjct: 95 EFDTRE-RWENPLIGWSSSADPLSNLSVPFKSKEAAIKFAEKNGWRYEVEEKHERTPKVK 153 Query: 63 SYQRNFSYDRL 73 SY NFS+D+ Sbjct: 154 SYGANFSWDKK 164 >gi|225718274|gb|ACO14983.1| NADH dehydrogenase iron-sulfur protein 4, mitochondrial precursor [Caligus clemensi] Length = 190 Score = 90.2 bits (223), Expect = 9e-17, Method: Composition-based stats. Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 1/72 (1%) Query: 2 LEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKE 61 LEFE + L+G+ SS D L + F E A + +G Y V +++ K Sbjct: 114 LEFETRE-RWENNLMGWASSGDPLSNTVVEFADKEDAIHFVKKNGWPYWVDDPKEKTPKP 172 Query: 62 LSYQRNFSYDRL 73 SY NF+++R Sbjct: 173 KSYALNFAWNRR 184 >gi|156354146|ref|XP_001623262.1| predicted protein [Nematostella vectensis] gi|156209943|gb|EDO31162.1| predicted protein [Nematostella vectensis] Length = 168 Score = 90.2 bits (223), Expect = 9e-17, Method: Composition-based stats. Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 1/71 (1%) Query: 2 LEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKE 61 LEF+ + + PL+G+ S+ D L L F S E A YA G Y V + ++ + Sbjct: 92 LEFDTME-RWENPLMGWASTGDPLSNTSLEFGSKEEAIIYAEKQGFNYEVDEAHEKIIRH 150 Query: 62 LSYQRNFSYDR 72 SY NFS+++ Sbjct: 151 KSYGANFSWNK 161 >gi|148223225|ref|NP_001087349.1| NADH dehydrogenase (ubiquinone) Fe-S protein 4, 18kDa (NADH-coenzyme Q reductase) [Xenopus laevis] gi|51593213|gb|AAH78596.1| MGC85528 protein [Xenopus laevis] Length = 166 Score = 90.2 bits (223), Expect = 9e-17, Method: Composition-based stats. Identities = 23/72 (31%), Positives = 35/72 (48%), Gaps = 1/72 (1%) Query: 2 LEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKE 61 +EF+ + PL+G+ S+ D L + L F S E A +A +G Y V K Sbjct: 90 MEFDTRE-RWENPLMGWASTADPLSNMVLSFSSKEDAISFAEKNGWSYEVDEKRIPKLKS 148 Query: 62 LSYQRNFSYDRL 73 SY NFS+++ Sbjct: 149 KSYGANFSWNKR 160 >gi|322798482|gb|EFZ20154.1| hypothetical protein SINV_12903 [Solenopsis invicta] Length = 165 Score = 90.2 bits (223), Expect = 9e-17, Method: Composition-based stats. Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 1/72 (1%) Query: 2 LEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKE 61 ++F+ + PL+G+TSS D + + + F + E A + G Y V K Sbjct: 89 MDFDTRE-RWENPLMGWTSSGDPMSNINVDFATKEEAIAHCKKMGWDYYVQEPNVSQPKP 147 Query: 62 LSYQRNFSYDRL 73 SY NFS+++ Sbjct: 148 RSYGMNFSWNKR 159 >gi|109077212|ref|XP_001096347.1| PREDICTED: NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial isoform 2 [Macaca mulatta] Length = 174 Score = 89.8 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 1/72 (1%) Query: 2 LEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKE 61 +EF+ + PL+G+ S+ D L + L F + E A +A +G Y V K Sbjct: 98 MEFDTRE-RWENPLMGWASTADPLSNMVLTFRTKEDAVSFAEKNGWSYDVEERKVPKPKS 156 Query: 62 LSYQRNFSYDRL 73 SY NFS+++ Sbjct: 157 KSYGANFSWNKR 168 >gi|225718840|gb|ACO15266.1| NADH dehydrogenase iron-sulfur protein 4, mitochondrial precursor [Caligus clemensi] Length = 146 Score = 89.8 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 1/72 (1%) Query: 2 LEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKE 61 LEFE + L+G+ SS D L + F E A + +G Y V +++ K Sbjct: 70 LEFETRE-RWENNLMGWASSGDPLSNTIVEFADKEDAIHFVKKNGWPYWVDDPKEKTPKP 128 Query: 62 LSYQRNFSYDRL 73 SY NF+++R Sbjct: 129 KSYALNFAWNRR 140 >gi|196002085|ref|XP_002110910.1| hypothetical protein TRIADDRAFT_22290 [Trichoplax adhaerens] gi|190586861|gb|EDV26914.1| hypothetical protein TRIADDRAFT_22290 [Trichoplax adhaerens] Length = 116 Score = 89.8 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 21/73 (28%), Positives = 36/73 (49%), Gaps = 1/73 (1%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +L+F+ + PL+G+ SS D + V + F S E A +A +G Y V + Sbjct: 39 ILDFDNQE-RWENPLMGWASSADPVSNVYVQFDSKEEAIAFAEKNGWTYTVDSPQLPTMV 97 Query: 61 ELSYQRNFSYDRL 73 +Y NFS+++ Sbjct: 98 PKTYGANFSWNKK 110 >gi|308485286|ref|XP_003104842.1| CRE-LPD-5 protein [Caenorhabditis remanei] gi|308257540|gb|EFP01493.1| CRE-LPD-5 protein [Caenorhabditis remanei] Length = 176 Score = 89.4 bits (221), Expect = 1e-16, Method: Composition-based stats. Identities = 16/66 (24%), Positives = 32/66 (48%), Gaps = 2/66 (3%) Query: 10 PYIEPLLGYTSSKDTLQQV--KLFFPSLEAAEKYASDHGIQYCVIPSCKESQKELSYQRN 67 + PL+G++ + D L V L F + E A + + ++ + + K +Y +N Sbjct: 105 RWENPLMGWSGTADPLSNVGMDLKFATKEDAIAFCEKNRWEFDIEEPHERKIKPKNYGQN 164 Query: 68 FSYDRL 73 FS++R Sbjct: 165 FSWNRK 170 >gi|126316420|ref|XP_001380794.1| PREDICTED: similar to NADH:ubiquinone oxidoreductase 18 kDa IP subunit [Monodelphis domestica] Length = 171 Score = 89.4 bits (221), Expect = 1e-16, Method: Composition-based stats. Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 1/72 (1%) Query: 2 LEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKE 61 +EF+ + PL+G+ S+ D L + L F + E A +A +G Y + K Sbjct: 95 MEFDTRE-RWENPLMGWASTADPLSNLVLSFSTKEDAVAFAEKNGWSYDIQERRVPKPKS 153 Query: 62 LSYQRNFSYDRL 73 SY NFS+++ Sbjct: 154 KSYGANFSWNKR 165 >gi|319777820|ref|YP_004134250.1| etc complex i subunit conserved region [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317171539|gb|ADV15076.1| ETC complex I subunit conserved region [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 255 Score = 89.4 bits (221), Expect = 1e-16, Method: Composition-based stats. Identities = 32/62 (51%), Positives = 41/62 (66%) Query: 2 LEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKE 61 L FE T P+IEPL+GYT +DTL QV+L FP+LEAA +YA G+ Y V SQ + Sbjct: 66 LIFEPRTAPFIEPLMGYTGGRDTLTQVQLDFPTLEAAIRYAERQGLSYVVQAPSSGSQAK 125 Query: 62 LS 63 +S Sbjct: 126 VS 127 >gi|326426654|gb|EGD72224.1| NADH dehydrogenase iron-sulfur protein 4 [Salpingoeca sp. ATCC 50818] Length = 180 Score = 89.4 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 19/64 (29%), Positives = 32/64 (50%) Query: 10 PYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKELSYQRNFS 69 + PL+G+ S+ D L V + F S E A + +G Y V + + + +Y NFS Sbjct: 111 RWQNPLMGWASTADPLSNVDVKFDSKEDAIAFCERNGWTYYVHEPSRRRRMKKNYGNNFS 170 Query: 70 YDRL 73 +D+ Sbjct: 171 WDKR 174 >gi|68341995|ref|NP_001020317.1| NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial precursor [Rattus norvegicus] gi|81889861|sp|Q5XIF3|NDUS4_RAT RecName: Full=NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial; AltName: Full=Complex I-18 kDa; Short=CI-18 kDa; AltName: Full=NADH-ubiquinone oxidoreductase 18 kDa subunit; Flags: Precursor gi|54035440|gb|AAH83729.1| NADH dehydrogenase (ubiquinone) Fe-S protein 4 [Rattus norvegicus] gi|119850879|gb|AAI27459.1| NADH dehydrogenase (ubiquinone) Fe-S protein 4 [Rattus norvegicus] gi|149059372|gb|EDM10379.1| NADH dehydrogenase (ubiquinone) Fe-S protein 4, 18kDa (NADH-coenzyme Q reductase), isoform CRA_a [Rattus norvegicus] Length = 175 Score = 89.4 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 23/72 (31%), Positives = 35/72 (48%), Gaps = 1/72 (1%) Query: 2 LEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKE 61 +EF+ + PL+G+ S+ D L + L F + E A +A HG Y V K Sbjct: 99 MEFDTRE-RWENPLMGWASTADPLSNMVLTFSAKEDAVAFAEKHGWSYDVEGRKVPKPKS 157 Query: 62 LSYQRNFSYDRL 73 SY NFS+++ Sbjct: 158 KSYGANFSWNKR 169 >gi|197099358|ref|NP_001125410.1| NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial precursor [Pongo abelii] gi|269969389|sp|P0CB95|NDUS4_PONAB RecName: Full=NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial; AltName: Full=Complex I-18 kDa; Short=CI-18 kDa; AltName: Full=NADH-ubiquinone oxidoreductase 18 kDa subunit; Flags: Precursor gi|269969390|sp|P0CB96|NDUS4_PONPY RecName: Full=NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial; AltName: Full=Complex I-18 kDa; Short=CI-18 kDa; AltName: Full=NADH-ubiquinone oxidoreductase 18 kDa subunit; Flags: Precursor gi|55727963|emb|CAH90734.1| hypothetical protein [Pongo abelii] gi|111661882|gb|ABH12174.1| mitochondrial complex I subunit NDUFS4 [Pongo pygmaeus] Length = 175 Score = 89.4 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 1/72 (1%) Query: 2 LEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKE 61 +EF+ + PL+G+ S+ D L + L F + E A +A +G Y V K Sbjct: 99 MEFDTRE-RWENPLMGWASTADPLSNMVLTFRTKEDAVSFAEKNGWSYDVEERKVPKPKS 157 Query: 62 LSYQRNFSYDRL 73 SY NFS+++ Sbjct: 158 KSYGANFSWNKR 169 >gi|327262849|ref|XP_003216236.1| PREDICTED: NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial-like [Anolis carolinensis] Length = 126 Score = 89.0 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 1/72 (1%) Query: 2 LEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKE 61 +EF+ + PL+G+ S+ D L + L F + E A +A +G Y V K Sbjct: 50 MEFDTRE-RWENPLMGWASTADPLSNMLLSFSTKETAIAFAEKNGWSYDVQERRIPKPKS 108 Query: 62 LSYQRNFSYDRL 73 SY NFS+++ Sbjct: 109 KSYGANFSWNKR 120 >gi|302762961|ref|XP_002964902.1| hypothetical protein SELMODRAFT_143005 [Selaginella moellendorffii] gi|300167135|gb|EFJ33740.1| hypothetical protein SELMODRAFT_143005 [Selaginella moellendorffii] Length = 106 Score = 89.0 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 25/70 (35%), Positives = 39/70 (55%), Gaps = 4/70 (5%) Query: 4 FEKITPPYIEPLLGYTSSKDTLQQV---KLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 FE Y +PL+G+TS+ D L V L F S E+A ++A+ HG +Y V +++ K Sbjct: 29 FESTE-KYQDPLMGWTSTSDPLAYVGDAALSFDSKESAIEFAAKHGWEYTVREPHQQTLK 87 Query: 61 ELSYQRNFSY 70 +Y NF + Sbjct: 88 PKAYADNFKW 97 >gi|268568286|ref|XP_002647989.1| C. briggsae CBR-LPD-5 protein [Caenorhabditis briggsae] gi|187040638|emb|CAP20660.1| CBR-LPD-5 protein [Caenorhabditis briggsae AF16] Length = 176 Score = 88.6 bits (219), Expect = 2e-16, Method: Composition-based stats. Identities = 16/66 (24%), Positives = 32/66 (48%), Gaps = 2/66 (3%) Query: 10 PYIEPLLGYTSSKDTLQQV--KLFFPSLEAAEKYASDHGIQYCVIPSCKESQKELSYQRN 67 + PL+G++ + D L V + F + E A + + ++ V + K +Y +N Sbjct: 105 RWENPLIGWSGTADPLSNVGMNMKFATKEDAIAFCEKNRWEFDVEEPHERKIKPKNYGQN 164 Query: 68 FSYDRL 73 FS++R Sbjct: 165 FSWNRR 170 >gi|227818350|ref|YP_002822321.1| hypothetical protein NGR_b00990 [Sinorhizobium fredii NGR234] gi|227337349|gb|ACP21568.1| hypothetical protein NGR_b00990 [Sinorhizobium fredii NGR234] Length = 247 Score = 88.6 bits (219), Expect = 3e-16, Method: Composition-based stats. Identities = 25/54 (46%), Positives = 36/54 (66%) Query: 2 LEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSC 55 L F++ + P+IEPL+GYT +DTL QV+L FP+ E+A +YA G+ Y V Sbjct: 64 LVFDRRSAPFIEPLMGYTGDRDTLTQVELDFPTRESAIRYAERQGLTYVVQAPA 117 >gi|13528960|gb|AAH05270.1| NADH dehydrogenase (ubiquinone) Fe-S protein 4, 18kDa (NADH-coenzyme Q reductase) [Homo sapiens] gi|312151972|gb|ADQ32498.1| NADH dehydrogenase (ubiquinone) Fe-S protein 4, 18kDa (NADH-coenzyme Q reductase) [synthetic construct] Length = 175 Score = 88.6 bits (219), Expect = 3e-16, Method: Composition-based stats. Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 1/72 (1%) Query: 2 LEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKE 61 +EF+ + PL+G+ S+ D L + L F + E A +A +G Y + K Sbjct: 99 MEFDTRE-RWENPLMGWASTADPLSNMVLTFSTKEDAVSFAEKNGWSYDIEERKVPKPKS 157 Query: 62 LSYQRNFSYDRL 73 SY NFS+++ Sbjct: 158 KSYGANFSWNKR 169 >gi|4505369|ref|NP_002486.1| NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial precursor [Homo sapiens] gi|3287881|sp|O43181|NDUS4_HUMAN RecName: Full=NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial; AltName: Full=Complex I-18 kDa; Short=CI-18 kDa; AltName: Full=Complex I-AQDQ; Short=CI-AQDQ; AltName: Full=NADH-ubiquinone oxidoreductase 18 kDa subunit; Flags: Precursor gi|115502481|sp|Q0MQH0|NDUS4_GORGO RecName: Full=NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial; AltName: Full=Complex I-18 kDa; Short=CI-18 kDa; AltName: Full=NADH-ubiquinone oxidoreductase 18 kDa subunit; Flags: Precursor gi|2655053|gb|AAB87865.1| NADH:ubiquinone oxidoreductase 18 kDa IP subunit [Homo sapiens] gi|111661880|gb|ABH12173.1| mitochondrial complex I subunit NDUFS4 [Gorilla gorilla] gi|119575279|gb|EAW54884.1| NADH dehydrogenase (ubiquinone) Fe-S protein 4, 18kDa (NADH-coenzyme Q reductase) [Homo sapiens] Length = 175 Score = 88.6 bits (219), Expect = 3e-16, Method: Composition-based stats. Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 1/72 (1%) Query: 2 LEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKE 61 +EF+ + PL+G+ S+ D L + L F + E A +A +G Y + K Sbjct: 99 MEFDTRE-RWENPLMGWASTADPLSNMVLTFSTKEDAVSFAEKNGWSYDIEERKVPKPKS 157 Query: 62 LSYQRNFSYDRL 73 SY NFS+++ Sbjct: 158 KSYGANFSWNKR 169 >gi|241896908|ref|NP_001155921.1| NADH dehydrogenase (ubiquinone) Fe-S protein 4 [Acyrthosiphon pisum] gi|239793613|dbj|BAH72915.1| ACYPI005324 [Acyrthosiphon pisum] Length = 196 Score = 88.6 bits (219), Expect = 3e-16, Method: Composition-based stats. Identities = 18/74 (24%), Positives = 37/74 (50%), Gaps = 2/74 (2%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVI-PSCKESQ 59 ++EF+ + PL+G+TS+ D L +K+ F A + +G ++ + + Sbjct: 118 VMEFDNRE-RWENPLMGWTSTGDPLSNMKIEFAERTDAINFCEKNGWKWYLEAENKTRPI 176 Query: 60 KELSYQRNFSYDRL 73 + SY NFS+++ Sbjct: 177 RSKSYANNFSWNKR 190 >gi|328769889|gb|EGF79932.1| hypothetical protein BATDEDRAFT_25454 [Batrachochytrium dendrobatidis JAM81] Length = 165 Score = 88.6 bits (219), Expect = 3e-16, Method: Composition-based stats. Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 1/71 (1%) Query: 2 LEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKE 61 L+F+ + PL+G++SS D +Q + + F + E A +A G Y V + Sbjct: 87 LDFD-TKARWENPLMGWSSSADPVQALMIKFDTKEDAIGFAKRQGYDYWVEEPKSSHSRV 145 Query: 62 LSYQRNFSYDR 72 Y NF+Y + Sbjct: 146 KVYAENFTYSK 156 >gi|307169781|gb|EFN62326.1| NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial [Camponotus floridanus] Length = 183 Score = 88.2 bits (218), Expect = 3e-16, Method: Composition-based stats. Identities = 20/72 (27%), Positives = 36/72 (50%), Gaps = 1/72 (1%) Query: 2 LEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKE 61 ++F+ + PL+G+TSS D + +++ F + E A + G +Y V K Sbjct: 107 MDFDTRE-RWENPLMGWTSSGDPMSNIQVNFATKEEAIAHCKKMGWEYYVQKPNLNQPKP 165 Query: 62 LSYQRNFSYDRL 73 SY NFS+++ Sbjct: 166 RSYGINFSWNKR 177 >gi|301783593|ref|XP_002927212.1| PREDICTED: NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial-like, partial [Ailuropoda melanoleuca] Length = 146 Score = 88.2 bits (218), Expect = 3e-16, Method: Composition-based stats. Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 1/72 (1%) Query: 2 LEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKE 61 +EF+ + PL+G+ S+ D L + L F + E A +A +G Y + K Sbjct: 70 MEFDTRE-RWENPLMGWASTADPLSNMILTFSTKEDAAAFAEKNGWSYDIEERKVPKPKS 128 Query: 62 LSYQRNFSYDRL 73 SY NFS+++ Sbjct: 129 KSYGANFSWNKR 140 >gi|239834984|ref|ZP_04683312.1| ETC complex I subunit region [Ochrobactrum intermedium LMG 3301] gi|239823047|gb|EEQ94616.1| ETC complex I subunit region [Ochrobactrum intermedium LMG 3301] Length = 254 Score = 88.2 bits (218), Expect = 4e-16, Method: Composition-based stats. Identities = 27/57 (47%), Positives = 38/57 (66%) Query: 2 LEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKES 58 L FE+ T P+IEPL+GYT DTL QV+L FP+L++A +YA G+ Y V ++ Sbjct: 64 LVFERRTAPFIEPLMGYTGGDDTLTQVELSFPTLQSAIRYAERQGLTYMVQTPPRQK 120 >gi|296194616|ref|XP_002745031.1| PREDICTED: NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial-like [Callithrix jacchus] Length = 175 Score = 87.8 bits (217), Expect = 4e-16, Method: Composition-based stats. Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 1/72 (1%) Query: 2 LEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKE 61 +EF+ + PL+G+ S+ D L + L F + E A +A +G Y V K Sbjct: 99 MEFDTRE-RWENPLMGWASTADPLSNMVLTFRTKEDAIFFAEKNGWSYDVEERRVPKPKS 157 Query: 62 LSYQRNFSYDRL 73 SY NFS+++ Sbjct: 158 KSYGANFSWNKR 169 >gi|57085281|ref|XP_536474.1| PREDICTED: similar to NADH-ubiquinone oxidoreductase 18 kDa subunit, mitochondrial precursor (Complex I-18 kDa) (CI-18 kDa) (Complex I-AQDQ) (CI-AQDQ) [Canis familiaris] Length = 175 Score = 87.8 bits (217), Expect = 5e-16, Method: Composition-based stats. Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 1/72 (1%) Query: 2 LEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKE 61 +EF+ + PL+G+ S+ D L + L F + E A +A +G Y + K Sbjct: 99 MEFDTRE-RWENPLMGWASTADPLSNMVLTFSTKEDAAAFAEKNGWSYDIEERKVPKPKS 157 Query: 62 LSYQRNFSYDRL 73 SY NFS+++ Sbjct: 158 KSYGANFSWNKR 169 >gi|116780730|gb|ABK21793.1| unknown [Picea sitchensis] gi|224285613|gb|ACN40525.1| unknown [Picea sitchensis] Length = 155 Score = 87.8 bits (217), Expect = 5e-16, Method: Composition-based stats. Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 3/67 (4%) Query: 7 ITPPYIEPLLGYTSSKDTLQQVK---LFFPSLEAAEKYASDHGIQYCVIPSCKESQKELS 63 T + PL+G+TS+ D V L+F S EAA+ +A HG +Y V + + Sbjct: 81 STQKWENPLMGWTSTGDPYANVGEAGLYFKSKEAAQSFAEKHGWEYVVKDPHTPLLRPKA 140 Query: 64 YQRNFSY 70 Y NF + Sbjct: 141 YADNFKW 147 >gi|116787585|gb|ABK24565.1| unknown [Picea sitchensis] Length = 155 Score = 87.8 bits (217), Expect = 5e-16, Method: Composition-based stats. Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 3/67 (4%) Query: 7 ITPPYIEPLLGYTSSKDTLQQVK---LFFPSLEAAEKYASDHGIQYCVIPSCKESQKELS 63 T + PL+G+TS+ D V L+F S EAA+ +A HG +Y V + + Sbjct: 81 STQKWENPLMGWTSTGDPYANVGEAGLYFKSKEAAQSFAEKHGWEYVVKDPHTPLLRPKA 140 Query: 64 YQRNFSY 70 Y NF + Sbjct: 141 YADNFKW 147 >gi|260459271|ref|ZP_05807526.1| ETC complex I subunit conserved region [Mesorhizobium opportunistum WSM2075] gi|259034825|gb|EEW36081.1| ETC complex I subunit conserved region [Mesorhizobium opportunistum WSM2075] Length = 249 Score = 87.5 bits (216), Expect = 5e-16, Method: Composition-based stats. Identities = 32/81 (39%), Positives = 46/81 (56%), Gaps = 8/81 (9%) Query: 2 LEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKE---- 57 L FE+ P IEPL+GYT S DTL QV+L FP+++AA YA G+ Y V + Sbjct: 63 LIFERRMAPVIEPLMGYTGSGDTLTQVELDFPTVQAAIDYAERQGLAYSVQVNPAAEKSA 122 Query: 58 ----SQKELSYQRNFSYDRLE 74 ++K L R+ ++RL+ Sbjct: 123 ESSSAEKRLQAGRDLVWNRLQ 143 >gi|68161122|gb|AAY86992.1| NADH dehydrogenase [Ictalurus punctatus] Length = 134 Score = 87.5 bits (216), Expect = 6e-16, Method: Composition-based stats. Identities = 19/72 (26%), Positives = 34/72 (47%), Gaps = 1/72 (1%) Query: 2 LEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKE 61 ++F+ + L+G+ S+ D L + L F + E A +A +G Y + + Sbjct: 58 MDFDTRE-RWENSLMGWASTADPLSNMTLTFSTKEDAIAFAEKNGWSYDITEKRTPKPRV 116 Query: 62 LSYQRNFSYDRL 73 SY NFS+D+ Sbjct: 117 KSYGANFSWDKR 128 >gi|58584802|ref|YP_198375.1| NADH:ubiquinone oxidoreductase 18 kDa subunit [Wolbachia endosymbiont strain TRS of Brugia malayi] gi|58419118|gb|AAW71133.1| NADH:ubiquinone oxidoreductase 18 kDa subunit [Wolbachia endosymbiont strain TRS of Brugia malayi] Length = 99 Score = 87.5 bits (216), Expect = 6e-16, Method: Composition-based stats. Identities = 25/67 (37%), Positives = 36/67 (53%), Gaps = 1/67 (1%) Query: 2 LEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKE 61 L+ E + YIEPL+G+ SK+ +Q+ L F LE A YA GI+Y + ++ Sbjct: 31 LKIEPES-YYIEPLMGWVGSKNPKKQIVLKFDYLEKAVLYAEKCGIKYIIEMPKDVKRRP 89 Query: 62 LSYQRNF 68 SY NF Sbjct: 90 KSYASNF 96 >gi|281344306|gb|EFB19890.1| hypothetical protein PANDA_016973 [Ailuropoda melanoleuca] Length = 116 Score = 87.5 bits (216), Expect = 6e-16, Method: Composition-based stats. Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 1/72 (1%) Query: 2 LEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKE 61 +EF+ + PL+G+ S+ D L + L F + E A +A +G Y + K Sbjct: 40 MEFDTRE-RWENPLMGWASTADPLSNMILTFSTKEDAAAFAEKNGWSYDIEERKVPKPKS 98 Query: 62 LSYQRNFSYDRL 73 SY NFS+++ Sbjct: 99 KSYGANFSWNKR 110 >gi|149059373|gb|EDM10380.1| NADH dehydrogenase (ubiquinone) Fe-S protein 4, 18kDa (NADH-coenzyme Q reductase), isoform CRA_b [Rattus norvegicus] Length = 89 Score = 87.5 bits (216), Expect = 6e-16, Method: Composition-based stats. Identities = 23/72 (31%), Positives = 35/72 (48%), Gaps = 1/72 (1%) Query: 2 LEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKE 61 +EF+ + PL+G+ S+ D L + L F + E A +A HG Y V K Sbjct: 13 MEFDTRE-RWENPLMGWASTADPLSNMVLTFSAKEDAVAFAEKHGWSYDVEGRKVPKPKS 71 Query: 62 LSYQRNFSYDRL 73 SY NFS+++ Sbjct: 72 KSYGANFSWNKR 83 >gi|290562511|gb|ADD38651.1| NADH dehydrogenase iron-sulfur protein 4, mitochondrial [Lepeophtheirus salmonis] Length = 192 Score = 87.1 bits (215), Expect = 7e-16, Method: Composition-based stats. Identities = 22/72 (30%), Positives = 33/72 (45%), Gaps = 1/72 (1%) Query: 2 LEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKE 61 LEFE + L+G+ SS D L + F E A ++ +G Y V + K Sbjct: 116 LEFETRE-RWENNLMGWASSGDPLSNTVVEFAEKEDAVRFVEKNGWPYWVDDPKERLPKP 174 Query: 62 LSYQRNFSYDRL 73 SY NFS+++ Sbjct: 175 KSYALNFSWNKR 186 >gi|312072649|ref|XP_003139161.1| NADH-ubiquinone oxidoreductase 18 kDa subunit [Loa loa] gi|307765677|gb|EFO24911.1| NADH-ubiquinone oxidoreductase 18 kDa subunit [Loa loa] Length = 178 Score = 87.1 bits (215), Expect = 8e-16, Method: Composition-based stats. Identities = 19/66 (28%), Positives = 34/66 (51%), Gaps = 2/66 (3%) Query: 10 PYIEPLLGYTSSKDTLQQVKLF--FPSLEAAEKYASDHGIQYCVIPSCKESQKELSYQRN 67 + PL+G++S+ D L + + F S E A +Y + + Y V+ + K SY N Sbjct: 107 RWENPLIGWSSTGDPLSNISMTMDFASKEDAIRYCETNNLNYEVVEPNERIIKPKSYADN 166 Query: 68 FSYDRL 73 FS+++ Sbjct: 167 FSWNKR 172 >gi|307108859|gb|EFN57098.1| hypothetical protein CHLNCDRAFT_143905 [Chlorella variabilis] Length = 159 Score = 87.1 bits (215), Expect = 8e-16, Method: Composition-based stats. Identities = 24/73 (32%), Positives = 38/73 (52%), Gaps = 6/73 (8%) Query: 8 TPPYIEPLLGYTSSKDTLQQV--KLFFPSLEAAEKYASDHGIQYCVI----PSCKESQKE 61 ++ PL+G+TS+ D L+ V +L+FPS + A YA +G Y V P+ ++ Sbjct: 72 KAKWVNPLIGWTSTADPLENVGRQLYFPSKDDAIAYAEKNGWSYEVQEYHNPNKARPKRY 131 Query: 62 LSYQRNFSYDRLE 74 + Y NFS R Sbjct: 132 IGYGDNFSVKRKG 144 >gi|255631034|gb|ACU15881.1| unknown [Glycine max] Length = 146 Score = 86.7 bits (214), Expect = 9e-16, Method: Composition-based stats. Identities = 24/67 (35%), Positives = 32/67 (47%), Gaps = 3/67 (4%) Query: 7 ITPPYIEPLLGYTSSKDTLQQV---KLFFPSLEAAEKYASDHGIQYCVIPSCKESQKELS 63 T + PL+G+TS+ D V L F S EAA+ +A HG +Y V K S Sbjct: 71 STQKWENPLMGWTSTGDPYSHVGDSALTFDSEEAAKAFAEKHGWEYSVKKPHTPLLKVKS 130 Query: 64 YQRNFSY 70 Y NF + Sbjct: 131 YADNFKW 137 >gi|255082368|ref|XP_002504170.1| predicted protein [Micromonas sp. RCC299] gi|226519438|gb|ACO65428.1| predicted protein [Micromonas sp. RCC299] Length = 177 Score = 86.7 bits (214), Expect = 9e-16, Method: Composition-based stats. Identities = 25/90 (27%), Positives = 33/90 (36%), Gaps = 18/90 (20%) Query: 7 ITPPYIEPLLGYTSSKD-TLQQVK--LFFPSLEAAEKYASDHGIQYCVIPSC-------- 55 + PL+G+TS+ D Q L F S EAA + HG Q+ V Sbjct: 76 EQQKWENPLMGWTSTGDAMAHQFNSILSFDSKEAAVAFCEKHGWQFEVQEPQLMGKGAST 135 Query: 56 -----KESQKELSYQRNFSYDRLE--PWTH 78 K + SY NF+ R W H Sbjct: 136 IPGAGKAGVRPKSYGDNFAVARKGIPVWPH 165 >gi|260461336|ref|ZP_05809584.1| ETC complex I subunit conserved region [Mesorhizobium opportunistum WSM2075] gi|259032873|gb|EEW34136.1| ETC complex I subunit conserved region [Mesorhizobium opportunistum WSM2075] Length = 197 Score = 86.7 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 28/56 (50%), Positives = 35/56 (62%) Query: 2 LEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKE 57 L FE+ P IEPL+GYT S DTL QV+L FP+++AA YA G+ Y V S Sbjct: 61 LIFERRMAPVIEPLMGYTGSGDTLTQVELDFPTVQAAIDYAERQGLAYSVQGSPAA 116 >gi|91087395|ref|XP_975662.1| PREDICTED: similar to NADH:ubiquinone dehydrogenase, putative [Tribolium castaneum] gi|270011092|gb|EFA07540.1| NADH dehydrogenase (ubiquinone) Fe-S protein 4 [Tribolium castaneum] Length = 191 Score = 86.7 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 23/73 (31%), Positives = 40/73 (54%), Gaps = 2/73 (2%) Query: 2 LEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSC-KESQK 60 ++F+ + PL+G+ S+ D L +KL F S E A +Y +G Q+ V S ++ K Sbjct: 114 MDFDTRE-RWENPLMGWCSTGDPLSNMKLQFSSKEDAIQYCEKNGWQWYVQESSFEKPFK 172 Query: 61 ELSYQRNFSYDRL 73 SY NF++++ Sbjct: 173 PKSYGINFAWNKR 185 >gi|254560114|ref|YP_003067209.1| hypothetical protein METDI1632 [Methylobacterium extorquens DM4] gi|254267392|emb|CAX23229.1| conserved hypothetical protein [Methylobacterium extorquens DM4] Length = 252 Score = 86.3 bits (213), Expect = 1e-15, Method: Composition-based stats. Identities = 27/58 (46%), Positives = 37/58 (63%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKES 58 +L FE+ TPP ++PL+G+T S D L QV L F SL+ A +YA GI Y V + E+ Sbjct: 51 VLRFERRTPPTVDPLMGWTESDDPLTQVVLKFDSLQEATRYADREGITYRVEEAAPEA 108 >gi|91763262|ref|ZP_01265226.1| ETC complex I subunit conserved region protein [Candidatus Pelagibacter ubique HTCC1002] gi|91717675|gb|EAS84326.1| ETC complex I subunit conserved region protein [Candidatus Pelagibacter ubique HTCC1002] Length = 93 Score = 86.3 bits (213), Expect = 1e-15, Method: Composition-based stats. Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 1/68 (1%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 ++EFE I PL+G+ ++ +TL ++ L F S E A +YA + I + +I K Sbjct: 25 LIEFETEDT-GINPLMGWETNSNTLSELNLEFSSKELAIEYAKKNKIDFEIIEPQKRKTV 83 Query: 61 ELSYQRNF 68 + SY NF Sbjct: 84 KKSYADNF 91 >gi|170750508|ref|YP_001756768.1| ETC complex I subunit region [Methylobacterium radiotolerans JCM 2831] gi|170657030|gb|ACB26085.1| ETC complex I subunit conserved region [Methylobacterium radiotolerans JCM 2831] Length = 225 Score = 85.9 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 24/63 (38%), Positives = 36/63 (57%), Gaps = 1/63 (1%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQ-QVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQ 59 +L FE+ TPP EPL+G+T +DTL +V L FP+ A YA G+ Y + P + + Sbjct: 48 LLTFERETPPEREPLMGWTGGRDTLAAEVVLTFPTRARAVAYAERQGLAYRIEPDPPDGR 107 Query: 60 KEL 62 + Sbjct: 108 RAG 110 >gi|224090461|ref|XP_002197336.1| PREDICTED: NADH dehydrogenase (ubiquinone) Fe-S protein 4 [Taeniopygia guttata] gi|197127972|gb|ACH44470.1| putative NADH dehydrogenase Fe-S protein 4 [Taeniopygia guttata] Length = 171 Score = 85.5 bits (211), Expect = 2e-15, Method: Composition-based stats. Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 1/72 (1%) Query: 2 LEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKE 61 +EF+ + PL+G+ S+ D L + L F + E A +A +G Y V K Sbjct: 95 MEFDNRE-RWENPLMGWASTADPLSNMVLTFSTKEDAIAFAEKNGWSYDVEEKKMPKPKS 153 Query: 62 LSYQRNFSYDRL 73 SY NFS+++ Sbjct: 154 KSYGANFSWNKR 165 >gi|225707832|gb|ACO09762.1| NADH dehydrogenase iron-sulfur protein 4, mitochondrial precursor [Osmerus mordax] Length = 170 Score = 85.5 bits (211), Expect = 2e-15, Method: Composition-based stats. Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 1/71 (1%) Query: 3 EFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKEL 62 +F+ + PL+G+ S+ D L + L F S E A +A +G Y + + Sbjct: 95 DFDTRE-RWENPLMGWGSTADPLSNMVLNFSSKEDAIAFAEKNGWSYDLTDKRTSKPRVK 153 Query: 63 SYQRNFSYDRL 73 SY NFS+++ Sbjct: 154 SYGANFSWNKR 164 >gi|312372237|gb|EFR20247.1| hypothetical protein AND_20452 [Anopheles darlingi] Length = 874 Score = 85.1 bits (210), Expect = 3e-15, Method: Composition-based stats. Identities = 19/72 (26%), Positives = 38/72 (52%), Gaps = 2/72 (2%) Query: 3 EFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSC-KESQKE 61 EF+ + PL+G++S+ D L +++ F S E A Y +G ++ V ++ + Sbjct: 798 EFDNRE-RWENPLMGWSSTGDPLSNLRVDFTSPEEAITYCERNGWRWFVDQPEVEKKHRV 856 Query: 62 LSYQRNFSYDRL 73 +Y NFS+++ Sbjct: 857 KNYGINFSWNKR 868 >gi|255628331|gb|ACU14510.1| unknown [Glycine max] Length = 146 Score = 85.1 bits (210), Expect = 3e-15, Method: Composition-based stats. Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 3/67 (4%) Query: 7 ITPPYIEPLLGYTSSKDTLQQV---KLFFPSLEAAEKYASDHGIQYCVIPSCKESQKELS 63 T + PL+G+TS+ D V L F S +AA+ +A HG +Y V K S Sbjct: 71 STQKWENPLMGWTSTGDPYSHVGDSALTFDSEQAAKAFAERHGWEYSVKKPHTPLLKVKS 130 Query: 64 YQRNFSY 70 Y NF + Sbjct: 131 YADNFKW 137 >gi|197127971|gb|ACH44469.1| putative NADH dehydrogenase Fe-S protein 4 [Taeniopygia guttata] Length = 171 Score = 85.1 bits (210), Expect = 3e-15, Method: Composition-based stats. Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 1/72 (1%) Query: 2 LEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKE 61 +EF+ + PL+G+ S+ D L + L F + E A +A +G Y V K Sbjct: 95 MEFDNRE-RWENPLMGWASTADPLSNMVLTFSTKEDAIAFAKKNGWSYDVEEKKMPKPKS 153 Query: 62 LSYQRNFSYDRL 73 SY NFS+++ Sbjct: 154 KSYGANFSWNKR 165 >gi|310795175|gb|EFQ30636.1| hypothetical protein GLRG_05780 [Glomerella graminicola M1.001] Length = 203 Score = 85.1 bits (210), Expect = 3e-15, Method: Composition-based stats. Identities = 21/66 (31%), Positives = 29/66 (43%) Query: 6 KITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKELSYQ 65 + PL+G+ SS D +Q KL F + E A +A G +Y V K +Y Sbjct: 128 PKGHRWENPLMGWQSSGDMMQGTKLNFKTKEDAILFAEKQGYEYFVSEPQSRRIKPKAYA 187 Query: 66 RNFSYD 71 NF Y Sbjct: 188 NNFLYS 193 >gi|302809583|ref|XP_002986484.1| hypothetical protein SELMODRAFT_18036 [Selaginella moellendorffii] gi|300145667|gb|EFJ12341.1| hypothetical protein SELMODRAFT_18036 [Selaginella moellendorffii] Length = 118 Score = 85.1 bits (210), Expect = 3e-15, Method: Composition-based stats. Identities = 25/70 (35%), Positives = 37/70 (52%), Gaps = 4/70 (5%) Query: 4 FEKITPPYIEPLLGYTSSKDTLQQV---KLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 FE Y +PL+G+TS+ D L V L F S E+A ++A+ HG +Y V S + Sbjct: 42 FESTE-KYQDPLMGWTSTSDPLAYVGDAALSFDSKESAIEFAAKHGWEYTVSVSITSLLR 100 Query: 61 ELSYQRNFSY 70 +Y NF + Sbjct: 101 PKAYADNFKW 110 >gi|297710514|ref|XP_002831922.1| PREDICTED: NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial-like [Pongo abelii] Length = 222 Score = 85.1 bits (210), Expect = 3e-15, Method: Composition-based stats. Identities = 21/72 (29%), Positives = 33/72 (45%), Gaps = 1/72 (1%) Query: 2 LEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKE 61 +EF+ + PL+G+ S+ D L + F + E A +A +G Y V K Sbjct: 146 MEFDTRE-RWENPLMGWASTADPLSNMVPSFRTKEDAVSFAEKNGWSYDVEERKFPKPKS 204 Query: 62 LSYQRNFSYDRL 73 SY NFS+ + Sbjct: 205 RSYGANFSWKKR 216 >gi|42520073|ref|NP_965988.1| oxidoreductase, putative [Wolbachia endosymbiont of Drosophila melanogaster] gi|42409810|gb|AAS13922.1| oxidoreductase, putative [Wolbachia endosymbiont of Drosophila melanogaster] Length = 99 Score = 85.1 bits (210), Expect = 3e-15, Method: Composition-based stats. Identities = 23/58 (39%), Positives = 31/58 (53%) Query: 11 YIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKELSYQRNF 68 YIEPL+G+ SKD +Q+ L F SLE A YA ++Y + + SY NF Sbjct: 39 YIEPLMGWVGSKDPKKQIVLKFDSLEKAVFYAKKRNVKYIIEMPKNVKRLPKSYASNF 96 >gi|58698056|ref|ZP_00372980.1| oxidoreductase, putative [Wolbachia endosymbiont of Drosophila ananassae] gi|225629938|ref|YP_002726729.1| oxidoreductase, putative [Wolbachia sp. wRi] gi|58535413|gb|EAL59488.1| oxidoreductase, putative [Wolbachia endosymbiont of Drosophila ananassae] gi|225591919|gb|ACN94938.1| oxidoreductase, putative [Wolbachia sp. wRi] Length = 99 Score = 85.1 bits (210), Expect = 3e-15, Method: Composition-based stats. Identities = 23/58 (39%), Positives = 31/58 (53%) Query: 11 YIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKELSYQRNF 68 YIEPL+G+ SKD +Q+ L F SLE A YA ++Y + + SY NF Sbjct: 39 YIEPLMGWVGSKDPKKQIVLKFDSLEKAVFYAKKRNVKYIIEMPKNVKRLPKSYASNF 96 >gi|188582920|ref|YP_001926365.1| ETC complex I subunit conserved region [Methylobacterium populi BJ001] gi|179346418|gb|ACB81830.1| ETC complex I subunit conserved region [Methylobacterium populi BJ001] Length = 250 Score = 85.1 bits (210), Expect = 3e-15, Method: Composition-based stats. Identities = 23/61 (37%), Positives = 33/61 (54%), Gaps = 1/61 (1%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTL-QQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQ 59 +L FE+ TPP I+ L+G+T DTL +V+L F S A YA G+ Y V + Sbjct: 49 ILSFERRTPPEIDELMGWTGGDDTLATEVRLTFASRAEAVAYAERQGLDYDVEAEPERIS 108 Query: 60 K 60 + Sbjct: 109 R 109 >gi|209883321|ref|YP_002287178.1| NADH-ubiquinone oxidoreductase 18 kd subunit [Oligotropha carboxidovorans OM5] gi|209871517|gb|ACI91313.1| NADH-ubiquinone oxidoreductase 18 kd subunit [Oligotropha carboxidovorans OM5] Length = 159 Score = 84.8 bits (209), Expect = 4e-15, Method: Composition-based stats. Identities = 27/53 (50%), Positives = 35/53 (66%) Query: 2 LEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPS 54 L FE+ T P+IEPL+GYT DTL QV+L FP+ E+A +YA G+ Y V Sbjct: 34 LIFERRTAPFIEPLMGYTGGDDTLTQVELAFPTPESAIRYAERQGLTYIVQRP 86 >gi|125983438|ref|XP_001355484.1| GA11474 [Drosophila pseudoobscura pseudoobscura] gi|195164004|ref|XP_002022839.1| GL14531 [Drosophila persimilis] gi|54643800|gb|EAL32543.1| GA11474 [Drosophila pseudoobscura pseudoobscura] gi|194104862|gb|EDW26905.1| GL14531 [Drosophila persimilis] Length = 181 Score = 84.8 bits (209), Expect = 4e-15, Method: Composition-based stats. Identities = 17/72 (23%), Positives = 36/72 (50%), Gaps = 2/72 (2%) Query: 3 EFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVI-PSCKESQKE 61 EF+ + PL+G+ SS D L + + F + + A Y +G ++ + + ++ Sbjct: 105 EFDNRE-RWENPLMGWASSGDPLSNLNVQFGTKDEAITYCERNGWRWYIDGEEKPKKERV 163 Query: 62 LSYQRNFSYDRL 73 +Y NFS+++ Sbjct: 164 KNYGINFSWNKR 175 >gi|197103232|ref|YP_002128610.1| hypothetical protein PHZ_p0092 [Phenylobacterium zucineum HLK1] gi|196480508|gb|ACG80035.1| hypothetical protein PHZ_p0092 [Phenylobacterium zucineum HLK1] Length = 228 Score = 84.8 bits (209), Expect = 4e-15, Method: Composition-based stats. Identities = 29/80 (36%), Positives = 43/80 (53%), Gaps = 11/80 (13%) Query: 4 FEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVI--------PSC 55 F+ + P IEPL+G+T S DTLQQV+L FP+ EAA Y G+ + V Sbjct: 55 FKPRSAPRIEPLMGWTESADTLQQVRLSFPTAEAAIGYCQRQGLAFEVQGGTGAAAYGEG 114 Query: 56 KESQKELSYQRNFSYDRLEP 75 + +++ LS N +R +P Sbjct: 115 RGAERPLS-ADN--ENRPQP 131 >gi|153011931|ref|YP_001373144.1| ETC complex I subunit region [Ochrobactrum anthropi ATCC 49188] gi|151563819|gb|ABS17315.1| ETC complex I subunit conserved region [Ochrobactrum anthropi ATCC 49188] Length = 250 Score = 84.4 bits (208), Expect = 5e-15, Method: Composition-based stats. Identities = 25/58 (43%), Positives = 37/58 (63%) Query: 2 LEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQ 59 L FE+ + P+IEPL+GYT D L QV+L FP+L++A +YA G+ Y V ++ Sbjct: 63 LVFERRSAPFIEPLMGYTGGSDPLAQVELEFPTLQSAIRYAKRQGLTYVVQRPADKAV 120 >gi|15240784|ref|NP_201560.1| FRO1 (FROSTBITE1); NADH dehydrogenase (ubiquinone) [Arabidopsis thaliana] gi|9757880|dbj|BAB08467.1| unnamed protein product [Arabidopsis thaliana] gi|26452345|dbj|BAC43258.1| unknown protein [Arabidopsis thaliana] gi|28372842|gb|AAO39903.1| At5g67590 [Arabidopsis thaliana] gi|332010981|gb|AED98364.1| NADH dehydrogenase (ubiquinone) Fe-S protein 4 [Arabidopsis thaliana] Length = 154 Score = 84.4 bits (208), Expect = 5e-15, Method: Composition-based stats. Identities = 23/64 (35%), Positives = 30/64 (46%), Gaps = 3/64 (4%) Query: 10 PYIEPLLGYTSSKDTLQQV---KLFFPSLEAAEKYASDHGIQYCVIPSCKESQKELSYQR 66 + PL+G+TS+ D V L F S EAA+ +A HG Y V K SY Sbjct: 83 KWENPLMGWTSTGDPYANVGDSALAFDSEEAAKSFAERHGWDYKVKKPNTPLLKVKSYSD 142 Query: 67 NFSY 70 NF + Sbjct: 143 NFKW 146 >gi|224067198|ref|XP_002302404.1| predicted protein [Populus trichocarpa] gi|222844130|gb|EEE81677.1| predicted protein [Populus trichocarpa] Length = 112 Score = 84.4 bits (208), Expect = 5e-15, Method: Composition-based stats. Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 3/67 (4%) Query: 7 ITPPYIEPLLGYTSSKDTLQQVK---LFFPSLEAAEKYASDHGIQYCVIPSCKESQKELS 63 T + PL+G+TS+ D V + F S EAA+ +A HG +Y V K S Sbjct: 44 STQKWENPLMGWTSTGDPYANVGEAGISFDSEEAAKAFAEKHGWEYEVKKRHTPLLKPKS 103 Query: 64 YQRNFSY 70 Y NF + Sbjct: 104 YADNFKW 110 >gi|220922191|ref|YP_002497493.1| ETC complex subunit I [Methylobacterium nodulans ORS 2060] gi|219946798|gb|ACL57190.1| ETC complex I subunit conserved region [Methylobacterium nodulans ORS 2060] Length = 248 Score = 84.4 bits (208), Expect = 5e-15, Method: Composition-based stats. Identities = 25/53 (47%), Positives = 33/53 (62%), Gaps = 1/53 (1%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTL-QQVKLFFPSLEAAEKYASDHGIQYCVI 52 +L FE+ T P IEPL+G+T+ DTL QV+L F S E A YA G+ Y + Sbjct: 54 VLRFERHTAPEIEPLMGWTAGDDTLATQVELRFASREDAVAYAERQGLCYRLD 106 >gi|118103795|ref|XP_424788.2| PREDICTED: similar to NADH dehydrogenase [Gallus gallus] Length = 254 Score = 84.4 bits (208), Expect = 5e-15, Method: Composition-based stats. Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 1/72 (1%) Query: 2 LEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKE 61 +EF+ + PL+G+ S+ D L + L F + E A +A +G Y V K Sbjct: 178 MEFDNRE-RWENPLMGWASTADPLSNMVLTFSTKEDAIAFAEKNGWNYDVEEKKIPKPKS 236 Query: 62 LSYQRNFSYDRL 73 SY NFS+++ Sbjct: 237 KSYGANFSWNKR 248 >gi|195159158|ref|XP_002020449.1| GL13999 [Drosophila persimilis] gi|198449516|ref|XP_002136914.1| CG12203.2 [Drosophila pseudoobscura pseudoobscura] gi|194117218|gb|EDW39261.1| GL13999 [Drosophila persimilis] gi|198130642|gb|EDY67472.1| CG12203.2 [Drosophila pseudoobscura pseudoobscura] Length = 182 Score = 84.4 bits (208), Expect = 5e-15, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 6/78 (7%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPS-----C 55 ++EF+ + PL+G+ SS D L + L F S A Y +G ++ V Sbjct: 100 LIEFDNRE-RWENPLMGWASSGDPLSNLNLQFGSKNEAITYCERNGWRWYVDKDSDRGQK 158 Query: 56 KESQKELSYQRNFSYDRL 73 + Q+ SY NFS+++ Sbjct: 159 PKKQRFKSYGVNFSWNKR 176 >gi|307213719|gb|EFN89068.1| NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial [Harpegnathos saltator] Length = 190 Score = 84.4 bits (208), Expect = 5e-15, Method: Composition-based stats. Identities = 20/71 (28%), Positives = 35/71 (49%), Gaps = 1/71 (1%) Query: 3 EFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKEL 62 +F+ + PL+G+TSS D + +K+ F S E A + G Y + + K Sbjct: 115 DFDTRE-RWENPLMGWTSSGDPMSNIKVDFTSQEEAIVHCKKMGWDYYIQKPNVSAPKPR 173 Query: 63 SYQRNFSYDRL 73 +Y NFS+++ Sbjct: 174 TYGMNFSWNKR 184 >gi|254560122|ref|YP_003067217.1| hypothetical protein METDI1640 [Methylobacterium extorquens DM4] gi|254267400|emb|CAX23237.1| conserved hypothetical protein [Methylobacterium extorquens DM4] Length = 250 Score = 84.0 bits (207), Expect = 6e-15, Method: Composition-based stats. Identities = 23/62 (37%), Positives = 33/62 (53%), Gaps = 1/62 (1%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTL-QQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQ 59 +L FE+ TPP I+ L+G+T DTL +V+L F S A YA G+ Y V + Sbjct: 49 ILSFERRTPPEIDDLMGWTGGDDTLATEVRLTFASRAEAIAYAERQGLDYDVEAEPERVP 108 Query: 60 KE 61 + Sbjct: 109 QA 110 >gi|297797623|ref|XP_002866696.1| hypothetical protein ARALYDRAFT_358798 [Arabidopsis lyrata subsp. lyrata] gi|297312531|gb|EFH42955.1| hypothetical protein ARALYDRAFT_358798 [Arabidopsis lyrata subsp. lyrata] Length = 154 Score = 84.0 bits (207), Expect = 6e-15, Method: Composition-based stats. Identities = 23/64 (35%), Positives = 30/64 (46%), Gaps = 3/64 (4%) Query: 10 PYIEPLLGYTSSKDTLQQV---KLFFPSLEAAEKYASDHGIQYCVIPSCKESQKELSYQR 66 + PL+G+TS+ D V L F S EAA+ +A HG Y V K SY Sbjct: 83 KWENPLMGWTSTGDPYANVGDSALAFDSEEAAKSFAERHGWDYKVKKPNTPLLKVKSYSD 142 Query: 67 NFSY 70 NF + Sbjct: 143 NFKW 146 >gi|195398771|ref|XP_002057994.1| GJ15739 [Drosophila virilis] gi|194150418|gb|EDW66102.1| GJ15739 [Drosophila virilis] Length = 176 Score = 84.0 bits (207), Expect = 7e-15, Method: Composition-based stats. Identities = 18/74 (24%), Positives = 38/74 (51%), Gaps = 2/74 (2%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVI-PSCKESQ 59 ++EF+ + PL+G+ S+ D L + + F + E A Y +G ++ V + + Sbjct: 98 LIEFDNRE-RWENPLMGWASTGDPLSNLNVQFGTKEEAITYCERNGWRWYVDGELKPKKE 156 Query: 60 KELSYQRNFSYDRL 73 + +Y NFS+++ Sbjct: 157 RVKNYGVNFSWNKR 170 >gi|71083698|ref|YP_266418.1| ETC complex I subunit region [Candidatus Pelagibacter ubique HTCC1062] gi|71062811|gb|AAZ21814.1| ETC complex I subunit conserved region [Candidatus Pelagibacter ubique HTCC1062] Length = 93 Score = 83.6 bits (206), Expect = 8e-15, Method: Composition-based stats. Identities = 20/57 (35%), Positives = 32/57 (56%) Query: 12 IEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKELSYQRNF 68 I PL+G+ ++ +TL ++ L F S E A +YA + I + +I K + SY NF Sbjct: 35 INPLMGWETNSNTLSELNLEFSSKELAIEYAKKNKIDFEIIEPQKRKTVKKSYADNF 91 >gi|115392057|ref|NP_001065262.1| NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial precursor [Pan troglodytes] gi|115502482|sp|Q0MQH1|NDUS4_PANTR RecName: Full=NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial; AltName: Full=Complex I-18 kDa; Short=CI-18 kDa; AltName: Full=NADH-ubiquinone oxidoreductase 18 kDa subunit; Flags: Precursor gi|111661878|gb|ABH12172.1| mitochondrial complex I subunit NDUFS4 [Pan troglodytes] Length = 175 Score = 83.6 bits (206), Expect = 8e-15, Method: Composition-based stats. Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 1/72 (1%) Query: 2 LEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKE 61 +EF+ + PL+G+ S+ D L + L + E A +A +G Y + K Sbjct: 99 MEFDTRE-RWENPLMGWASTADPLSNMVLTXSTKEDAVSFAEKNGWSYDIEERKVPKPKS 157 Query: 62 LSYQRNFSYDRL 73 SY NFS+++ Sbjct: 158 KSYGANFSWNKR 169 >gi|19110803|gb|AAL85284.1| NADH dehydrogenase [Gallus gallus] Length = 116 Score = 83.6 bits (206), Expect = 8e-15, Method: Composition-based stats. Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 1/72 (1%) Query: 2 LEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKE 61 +EF+ + PL+G+ S+ D L + L F + E A +A +G Y V K Sbjct: 40 MEFDNRE-RWENPLMGWASTADPLSNMVLTFSTKEDAIAFAEKNGWNYDVEEKKIPKPKS 98 Query: 62 LSYQRNFSYDRL 73 SY NFS+++ Sbjct: 99 KSYGANFSWNKR 110 >gi|21555571|gb|AAM63888.1| unknown [Arabidopsis thaliana] Length = 154 Score = 83.6 bits (206), Expect = 8e-15, Method: Composition-based stats. Identities = 23/64 (35%), Positives = 30/64 (46%), Gaps = 3/64 (4%) Query: 10 PYIEPLLGYTSSKDTLQQV---KLFFPSLEAAEKYASDHGIQYCVIPSCKESQKELSYQR 66 + PL+G+TS+ D V L F S EAA+ +A HG Y V K SY Sbjct: 83 KWENPLMGWTSTGDPYANVGDSALAFDSEEAAKSFAERHGWDYKVKKPNTPLLKVKSYSD 142 Query: 67 NFSY 70 NF + Sbjct: 143 NFKW 146 >gi|255568613|ref|XP_002525280.1| NADH-ubiquinone oxidoreductase 18 kDa subunit, mitochondrial precursor, putative [Ricinus communis] gi|223535438|gb|EEF37108.1| NADH-ubiquinone oxidoreductase 18 kDa subunit, mitochondrial precursor, putative [Ricinus communis] Length = 159 Score = 83.6 bits (206), Expect = 9e-15, Method: Composition-based stats. Identities = 24/67 (35%), Positives = 33/67 (49%), Gaps = 3/67 (4%) Query: 7 ITPPYIEPLLGYTSSKDTLQQV---KLFFPSLEAAEKYASDHGIQYCVIPSCKESQKELS 63 T + PL+G+TS+ D V L F S EAA+++A HG +Y V K S Sbjct: 84 STQKWENPLMGWTSTGDPYANVGDSALSFDSEEAAKEFAERHGWEYVVKKRHTPLLKVKS 143 Query: 64 YQRNFSY 70 Y NF + Sbjct: 144 YADNFKF 150 >gi|328542276|ref|YP_004302385.1| ETC complex I subunit conserved region [Polymorphum gilvum SL003B-26A1] gi|326412025|gb|ADZ69088.1| ETC complex I subunit conserved region [Polymorphum gilvum SL003B-26A1] Length = 191 Score = 83.6 bits (206), Expect = 9e-15, Method: Composition-based stats. Identities = 24/61 (39%), Positives = 34/61 (55%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +LEFE PP+IEPL+GYTSS D + ++L FP E+A +A +Y V + Sbjct: 46 ILEFEPSRPPHIEPLMGYTSSDDPYRPIRLKFPDRESAVAFAERQDWRYIVREDTTHRRA 105 Query: 61 E 61 Sbjct: 106 P 106 >gi|118489631|gb|ABK96617.1| unknown [Populus trichocarpa x Populus deltoides] Length = 159 Score = 83.2 bits (205), Expect = 1e-14, Method: Composition-based stats. Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 3/64 (4%) Query: 10 PYIEPLLGYTSSKDTLQQV---KLFFPSLEAAEKYASDHGIQYCVIPSCKESQKELSYQR 66 + PL+G+TS+ D V L F S EAA+ +A HG +Y V K +Y Sbjct: 87 KWENPLMGWTSTGDPYAHVGDSALGFDSEEAAKAFAERHGWEYVVKKRHTPLLKVKAYAD 146 Query: 67 NFSY 70 NF + Sbjct: 147 NFKF 150 >gi|225677073|ref|ZP_03788078.1| oxidoreductase, putative [Wolbachia endosymbiont of Muscidifurax uniraptor] gi|225590895|gb|EEH12117.1| oxidoreductase, putative [Wolbachia endosymbiont of Muscidifurax uniraptor] Length = 99 Score = 83.2 bits (205), Expect = 1e-14, Method: Composition-based stats. Identities = 23/58 (39%), Positives = 31/58 (53%) Query: 11 YIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKELSYQRNF 68 YIEPL+G+ SKD +Q+ L F SLE A YA ++Y + + SY NF Sbjct: 39 YIEPLMGWVGSKDPKKQIVLKFDSLEKAVFYAKKCNVKYIIEMPKNVKRLPKSYASNF 96 >gi|224097254|ref|XP_002310893.1| predicted protein [Populus trichocarpa] gi|118485306|gb|ABK94512.1| unknown [Populus trichocarpa] gi|222853796|gb|EEE91343.1| predicted protein [Populus trichocarpa] Length = 159 Score = 83.2 bits (205), Expect = 1e-14, Method: Composition-based stats. Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 3/64 (4%) Query: 10 PYIEPLLGYTSSKDTLQQV---KLFFPSLEAAEKYASDHGIQYCVIPSCKESQKELSYQR 66 + PL+G+TS+ D V L F S EAA+ +A HG +Y V K +Y Sbjct: 87 KWENPLMGWTSTGDPYAHVGDSALGFDSEEAAKAFAERHGWEYVVKKRHTPLLKVKAYAD 146 Query: 67 NFSY 70 NF + Sbjct: 147 NFKF 150 >gi|26372942|dbj|BAB27417.2| unnamed protein product [Mus musculus] Length = 175 Score = 83.2 bits (205), Expect = 1e-14, Method: Composition-based stats. Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 1/72 (1%) Query: 2 LEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKE 61 +EF+ + PL+G+ S+ D L + L F + E A +A +G Y V K Sbjct: 99 MEFDTRE-RWENPLMGWASTADPLSNMVLTFSAKEDAIAFAEKNGWSYDVEEKKVPKPKS 157 Query: 62 LSYQRNFSYDRL 73 SY NFS+++ Sbjct: 158 KSYGANFSWNKR 169 >gi|47117304|sp|Q9CXZ1|NDUS4_MOUSE RecName: Full=NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial; AltName: Full=Complex I-18 kDa; Short=CI-18 kDa; AltName: Full=Complex I-AQDQ; Short=CI-AQDQ; AltName: Full=NADH-ubiquinone oxidoreductase 18 kDa subunit; Flags: Precursor Length = 175 Score = 83.2 bits (205), Expect = 1e-14, Method: Composition-based stats. Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 1/72 (1%) Query: 2 LEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKE 61 +EF+ + PL+G+ S+ D L + L F + E A +A +G Y V K Sbjct: 99 MEFDTRE-RWENPLMGWASTADPLSNMVLTFSAKEDAIAFAEKNGWSYDVEEKKVPKPKS 157 Query: 62 LSYQRNFSYDRL 73 SY NFS+++ Sbjct: 158 KSYGANFSWNKR 169 >gi|281485615|ref|NP_035017.2| NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial [Mus musculus] Length = 175 Score = 83.2 bits (205), Expect = 1e-14, Method: Composition-based stats. Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 1/72 (1%) Query: 2 LEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKE 61 +EF+ + PL+G+ S+ D L + L F + E A +A +G Y V K Sbjct: 99 MEFDTRE-RWENPLMGWASTADPLSNMVLTFSAKEDAIAFAEKNGWSYDVEEKKVPKPKS 157 Query: 62 LSYQRNFSYDRL 73 SY NFS+++ Sbjct: 158 KSYGANFSWNKR 169 >gi|328793182|ref|XP_001123307.2| PREDICTED: NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial [Apis mellifera] Length = 186 Score = 82.8 bits (204), Expect = 1e-14, Method: Composition-based stats. Identities = 18/71 (25%), Positives = 35/71 (49%), Gaps = 1/71 (1%) Query: 3 EFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKEL 62 +F+ + PL+G+TS+ D L + + F + E A + + +Y + + K Sbjct: 111 DFDTRE-RWENPLMGWTSTGDPLSNLHVTFATKEEAIAHCNKMRWKYYIQNPNINNPKPR 169 Query: 63 SYQRNFSYDRL 73 SY NFS+++ Sbjct: 170 SYGTNFSWNKR 180 >gi|148686433|gb|EDL18380.1| NADH dehydrogenase (ubiquinone) Fe-S protein 4 [Mus musculus] Length = 184 Score = 82.8 bits (204), Expect = 1e-14, Method: Composition-based stats. Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 1/72 (1%) Query: 2 LEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKE 61 +EF+ + PL+G+ S+ D L + L F + E A +A +G Y V K Sbjct: 108 MEFDTRE-RWENPLMGWASTADPLSNMVLTFSAKEDAIAFAEKNGWSYDVEEKKVPKPKS 166 Query: 62 LSYQRNFSYDRL 73 SY NFS+++ Sbjct: 167 KSYGANFSWNKR 178 >gi|4836509|gb|AAD30474.1|AF124785_1 NADH-ubiquinone oxidoreductase 18 kDa IP subunit [Mus musculus] Length = 162 Score = 82.8 bits (204), Expect = 1e-14, Method: Composition-based stats. Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 1/72 (1%) Query: 2 LEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKE 61 +EF+ + PL+G+ S+ D L + L F + E A +A +G Y V K Sbjct: 86 MEFDTRE-RWENPLMGWASTADPLSNMVLTFSAKEDAIAFAEKNGWSYDVEEKKVPKPKS 144 Query: 62 LSYQRNFSYDRL 73 SY NFS+++ Sbjct: 145 KSYGANFSWNKR 156 >gi|297493938|gb|ADI40691.1| NADH dehydrogenase Fe-S protein 4, 18kDa [Miniopterus schreibersii] Length = 124 Score = 82.8 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 1/64 (1%) Query: 2 LEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKE 61 LEF+ + PL+G+ S+ D L + L F + E A +A +G Y V K Sbjct: 62 LEFDTRE-RWENPLMGWASTADPLSNLVLTFSTKEDAVAFAEKNGWSYDVEERKVPKPKS 120 Query: 62 LSYQ 65 SY Sbjct: 121 KSYG 124 >gi|240142559|ref|YP_002967072.1| hypothetical protein MexAM1_META2p0916 [Methylobacterium extorquens AM1] gi|240012506|gb|ACS43731.1| conserved hypothetical protein [Methylobacterium extorquens AM1] Length = 187 Score = 82.8 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 23/59 (38%), Positives = 33/59 (55%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQ 59 +LEFE PP IEPL+GYTSS D + ++L FP ++A +A Y V ++ Sbjct: 46 VLEFEPSRPPQIEPLMGYTSSGDPYRPIRLKFPDRDSAVDFAERQDWHYVVREDAGGAR 104 >gi|288856254|ref|NP_001165782.1| NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial [Nasonia vitripennis] Length = 194 Score = 82.5 bits (203), Expect = 2e-14, Method: Composition-based stats. Identities = 22/64 (34%), Positives = 33/64 (51%) Query: 10 PYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKELSYQRNFS 69 + PL+G+ SS D LQ ++ F + E A ++ G +Y V K K SY NFS Sbjct: 125 RWENPLMGWCSSGDPLQATRVNFQTAEQAIEHCKHMGWKYVVQKENKSDPKPRSYGTNFS 184 Query: 70 YDRL 73 +D+ Sbjct: 185 WDKR 188 >gi|14919381|gb|AAH04618.1| NADH dehydrogenase (ubiquinone) Fe-S protein 4 [Mus musculus] Length = 162 Score = 82.5 bits (203), Expect = 2e-14, Method: Composition-based stats. Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 1/72 (1%) Query: 2 LEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKE 61 +EF+ + PL+G+ S+ D L + L F + E A +A +G Y V K Sbjct: 86 MEFDTRE-RWENPLMGWASTADPLSNMVLTFSAKEDAIAFAEKNGWSYDVEEKKVPKPKS 144 Query: 62 LSYQRNFSYDRL 73 SY NFS+++ Sbjct: 145 KSYGANFSWNKR 156 >gi|118197450|gb|ABK78688.1| NADH-ubiquinone oxidoreductase related-like protein [Brassica rapa] Length = 153 Score = 82.5 bits (203), Expect = 2e-14, Method: Composition-based stats. Identities = 22/64 (34%), Positives = 29/64 (45%), Gaps = 3/64 (4%) Query: 10 PYIEPLLGYTSSKDTLQQV---KLFFPSLEAAEKYASDHGIQYCVIPSCKESQKELSYQR 66 + PL+G+TS+ D V L F S AA+ +A HG Y V K SY Sbjct: 82 KWENPLMGWTSTGDPYANVGDSALGFDSELAAKSFAERHGWDYVVKEPKTPLLKAKSYSD 141 Query: 67 NFSY 70 NF + Sbjct: 142 NFKW 145 >gi|170595846|ref|XP_001902542.1| ETC complex I subunit conserved region family protein [Brugia malayi] gi|158589732|gb|EDP28613.1| ETC complex I subunit conserved region family protein [Brugia malayi] Length = 174 Score = 82.1 bits (202), Expect = 2e-14, Method: Composition-based stats. Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 2/66 (3%) Query: 10 PYIEPLLGYTSSKDTLQQVKL--FFPSLEAAEKYASDHGIQYCVIPSCKESQKELSYQRN 67 + L+G++S+ D L + + F S E A +Y + + Y VI + K SY N Sbjct: 103 RWENSLIGWSSTGDPLSNISMAMDFASKEDAVRYCETNNLNYEVIEPNERVIKPKSYAEN 162 Query: 68 FSYDRL 73 FS+++ Sbjct: 163 FSWNKR 168 >gi|226502326|ref|NP_001147419.1| LOC100281028 [Zea mays] gi|195611248|gb|ACG27454.1| NADH-ubiquinone oxidoreductase 18 kDa subunit [Zea mays] Length = 157 Score = 82.1 bits (202), Expect = 2e-14, Method: Composition-based stats. Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 3/68 (4%) Query: 7 ITPPYIEPLLGYTSSKDTLQQVK---LFFPSLEAAEKYASDHGIQYCVIPSCKESQKELS 63 T + PL+G+TS+ D V L F S E+A+ +A HG Y V + + Sbjct: 82 STQKWENPLMGWTSTGDPYANVGEAGLTFDSAESAKAFAEKHGWNYVVRKRHAPLLRPKA 141 Query: 64 YQRNFSYD 71 Y NF + Sbjct: 142 YAENFKWR 149 >gi|195059488|ref|XP_001995647.1| GH17652 [Drosophila grimshawi] gi|193896433|gb|EDV95299.1| GH17652 [Drosophila grimshawi] Length = 175 Score = 82.1 bits (202), Expect = 3e-14, Method: Composition-based stats. Identities = 19/72 (26%), Positives = 35/72 (48%), Gaps = 2/72 (2%) Query: 3 EFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVI-PSCKESQKE 61 EF+ + PL+G+ SS D L + + F S + A Y +G ++ V ++ Sbjct: 99 EFDNRD-RWENPLMGWASSGDPLSNLNVQFGSKDEAITYCERNGWKWYVDGELKTRKERV 157 Query: 62 LSYQRNFSYDRL 73 +Y NFS+++ Sbjct: 158 KNYGVNFSWNKR 169 >gi|242050704|ref|XP_002463096.1| hypothetical protein SORBIDRAFT_02g037780 [Sorghum bicolor] gi|241926473|gb|EER99617.1| hypothetical protein SORBIDRAFT_02g037780 [Sorghum bicolor] Length = 157 Score = 81.7 bits (201), Expect = 3e-14, Method: Composition-based stats. Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 3/68 (4%) Query: 7 ITPPYIEPLLGYTSSKDTLQQVK---LFFPSLEAAEKYASDHGIQYCVIPSCKESQKELS 63 T + PL+G+TS+ D V L F S E+A+ +A HG Y V K + Sbjct: 82 STQKWENPLMGWTSTGDPYANVGEAGLTFDSAESAKAFAEKHGWNYVVRKRHTPLLKPKA 141 Query: 64 YQRNFSYD 71 Y NF + Sbjct: 142 YAENFKWR 149 >gi|218462437|ref|ZP_03502528.1| ETC complex I subunit region [Rhizobium etli Kim 5] Length = 252 Score = 81.7 bits (201), Expect = 3e-14, Method: Composition-based stats. Identities = 27/67 (40%), Positives = 38/67 (56%), Gaps = 3/67 (4%) Query: 2 LEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKES--- 58 L FE +IEPL+GYT DTL QV+L FP+L++A +YA G+ Y V ++ Sbjct: 65 LVFEHRKAQFIEPLMGYTGCTDTLPQVELEFPTLQSAIRYAERQGLTYIVKRLASKAAVP 124 Query: 59 QKELSYQ 65 K +Y Sbjct: 125 PKRRTYA 131 >gi|294648532|ref|ZP_06726004.1| conserved hypothetical protein [Acinetobacter haemolyticus ATCC 19194] gi|292825573|gb|EFF84304.1| conserved hypothetical protein [Acinetobacter haemolyticus ATCC 19194] Length = 192 Score = 81.7 bits (201), Expect = 3e-14, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 33/61 (54%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +LEFE P +EPL+G+T+S+D + +++ FP ++A YA + +Y V Sbjct: 47 VLEFEPSRPQNLEPLMGWTTSQDPYRPIRMTFPDRDSAVDYALKNDWRYIVREDRPRRIG 106 Query: 61 E 61 Sbjct: 107 P 107 >gi|153011786|ref|YP_001372999.1| ETC complex I subunit region [Ochrobactrum anthropi ATCC 49188] gi|151563674|gb|ABS17170.1| ETC complex I subunit conserved region [Ochrobactrum anthropi ATCC 49188] Length = 170 Score = 81.7 bits (201), Expect = 3e-14, Method: Composition-based stats. Identities = 23/59 (38%), Positives = 34/59 (57%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQ 59 +LEFE PP+IEPL+GYTSS D + ++L FP ++A +A Y V ++ Sbjct: 29 ILEFEPSRPPHIEPLMGYTSSGDPYRPIRLKFPDRDSAVDFAERQDWHYVVREDAGGAR 87 >gi|223974149|gb|ACN31262.1| unknown [Zea mays] Length = 115 Score = 81.3 bits (200), Expect = 4e-14, Method: Composition-based stats. Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 3/68 (4%) Query: 7 ITPPYIEPLLGYTSSKDTLQQVK---LFFPSLEAAEKYASDHGIQYCVIPSCKESQKELS 63 T + PL+G+TS+ D V L F S E+A+ +A HG Y V + + Sbjct: 40 STQKWENPLMGWTSTGDPYANVGEAGLTFDSAESAKAFAEKHGWNYVVRKRHAPLLRPKA 99 Query: 64 YQRNFSYD 71 Y NF + Sbjct: 100 YAENFKWR 107 >gi|115473055|ref|NP_001060126.1| Os07g0585800 [Oryza sativa Japonica Group] gi|50509945|dbj|BAD30267.1| NADH-ubiquinone oxidoreductase-related-like protein [Oryza sativa Japonica Group] gi|113611662|dbj|BAF22040.1| Os07g0585800 [Oryza sativa Japonica Group] gi|218199922|gb|EEC82349.1| hypothetical protein OsI_26657 [Oryza sativa Indica Group] gi|222637356|gb|EEE67488.1| hypothetical protein OsJ_24916 [Oryza sativa Japonica Group] Length = 159 Score = 81.3 bits (200), Expect = 4e-14, Method: Composition-based stats. Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 3/68 (4%) Query: 7 ITPPYIEPLLGYTSSKDTLQQVK---LFFPSLEAAEKYASDHGIQYCVIPSCKESQKELS 63 T + PL+G+TS+ D V L F S ++A+ +A HG Y V K S Sbjct: 84 STQKWENPLMGWTSTGDPYANVGEAGLTFDSADSAKAFAEKHGWDYVVRKRHTPLLKAKS 143 Query: 64 YQRNFSYD 71 Y NF + Sbjct: 144 YAENFKWR 151 >gi|171683603|ref|XP_001906744.1| hypothetical protein [Podospora anserina S mat+] gi|170941761|emb|CAP67415.1| unnamed protein product [Podospora anserina S mat+] Length = 214 Score = 81.3 bits (200), Expect = 4e-14, Method: Composition-based stats. Identities = 20/62 (32%), Positives = 30/62 (48%) Query: 10 PYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKELSYQRNFS 69 + PL+G+ SS D++Q L F S E A +A G +Y V + +Y NF+ Sbjct: 143 RWENPLMGWQSSADSMQGTHLTFKSKEDAIAFAEKQGYEYFVQEPNTRAFTPKAYANNFT 202 Query: 70 YD 71 Y Sbjct: 203 YS 204 >gi|225558459|gb|EEH06743.1| NADH-ubiquinone oxidoreductase [Ajellomyces capsulatus G186AR] Length = 225 Score = 81.3 bits (200), Expect = 4e-14, Method: Composition-based stats. Identities = 20/59 (33%), Positives = 29/59 (49%) Query: 10 PYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKELSYQRNF 68 + PL+G+ SS D +Q L F S E A +A G +Y V K + + +Y NF Sbjct: 154 RWENPLMGWQSSADAMQATHLDFKSKEDAISFAEKQGYEYFVQEPNKRAFRPKAYANNF 212 >gi|195479786|ref|XP_002101028.1| GE15845 [Drosophila yakuba] gi|194188552|gb|EDX02136.1| GE15845 [Drosophila yakuba] Length = 184 Score = 81.3 bits (200), Expect = 4e-14, Method: Composition-based stats. Identities = 18/72 (25%), Positives = 36/72 (50%), Gaps = 2/72 (2%) Query: 3 EFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVI-PSCKESQKE 61 EF+ + PL+G+ SS D L + + F S E A + +G ++ V + ++ Sbjct: 108 EFDNRE-RWENPLMGWASSGDPLSNMNVQFGSQEEAITFCERNGWRWYVDGAEKPKKERV 166 Query: 62 LSYQRNFSYDRL 73 +Y NF++++ Sbjct: 167 KNYGINFAWNKR 178 >gi|195446692|ref|XP_002070883.1| GK25430 [Drosophila willistoni] gi|194166968|gb|EDW81869.1| GK25430 [Drosophila willistoni] Length = 176 Score = 80.9 bits (199), Expect = 5e-14, Method: Composition-based stats. Identities = 18/72 (25%), Positives = 36/72 (50%), Gaps = 2/72 (2%) Query: 3 EFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVI-PSCKESQKE 61 EF+ + PL+G+ S+ D L + + F S + A Y +G ++ V + ++ Sbjct: 100 EFDNRE-RWENPLMGWASTGDPLSNMNVQFGSKDEAITYCERNGWRWFVDGDDKPKKERV 158 Query: 62 LSYQRNFSYDRL 73 +Y NFS+++ Sbjct: 159 KNYGVNFSWNKR 170 >gi|194892953|ref|XP_001977774.1| GG19227 [Drosophila erecta] gi|190649423|gb|EDV46701.1| GG19227 [Drosophila erecta] Length = 184 Score = 80.9 bits (199), Expect = 5e-14, Method: Composition-based stats. Identities = 18/72 (25%), Positives = 36/72 (50%), Gaps = 2/72 (2%) Query: 3 EFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVI-PSCKESQKE 61 EF+ + PL+G+ SS D L + + F S E A + +G ++ V + ++ Sbjct: 108 EFDNRE-RWENPLMGWASSGDPLSNMNVQFGSQEEAITFCERNGWRWYVDGAEKPKKERV 166 Query: 62 LSYQRNFSYDRL 73 +Y NF++++ Sbjct: 167 KNYGINFAWNKR 178 >gi|167517885|ref|XP_001743283.1| hypothetical protein [Monosiga brevicollis MX1] gi|163778382|gb|EDQ91997.1| predicted protein [Monosiga brevicollis MX1] Length = 120 Score = 80.9 bits (199), Expect = 5e-14, Method: Composition-based stats. Identities = 18/66 (27%), Positives = 34/66 (51%), Gaps = 2/66 (3%) Query: 10 PYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPS--CKESQKELSYQRN 67 ++ PL+G+ S+ D + V + F + E A ++ G + V K+ +K +Y N Sbjct: 49 RWVNPLMGWASTADPMSNVDVKFDTKEEAIRFCEQKGWTFYVHEPYVKKKFRKVSNYGNN 108 Query: 68 FSYDRL 73 FS+D+ Sbjct: 109 FSWDKR 114 >gi|39944250|ref|XP_361662.1| hypothetical protein MGG_04136 [Magnaporthe oryzae 70-15] gi|145014871|gb|EDJ99439.1| hypothetical protein MGG_04136 [Magnaporthe oryzae 70-15] Length = 207 Score = 80.9 bits (199), Expect = 5e-14, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 29/62 (46%) Query: 10 PYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKELSYQRNFS 69 + PL+G+ SS D +Q ++F S E A +A G +Y V + +Y NF Sbjct: 136 RWENPLMGWQSSGDFMQGSHIYFKSKEEAIAFAEKQGYEYFVQEPNERKITPKAYANNFL 195 Query: 70 YD 71 Y Sbjct: 196 YS 197 >gi|218659396|ref|ZP_03515326.1| hypothetical protein RetlI_06876 [Rhizobium etli IE4771] Length = 104 Score = 80.9 bits (199), Expect = 6e-14, Method: Composition-based stats. Identities = 26/51 (50%), Positives = 37/51 (72%) Query: 2 LEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVI 52 L F++ + P+IEPLLGYT S +TL QV+L FP+LE+A +YA G+ Y + Sbjct: 21 LVFDRCSAPFIEPLLGYTGSGETLVQVELKFPTLESAIRYAERQGLDYFLQ 71 >gi|212722756|ref|NP_001132398.1| hypothetical protein LOC100193844 [Zea mays] gi|194694272|gb|ACF81220.1| unknown [Zea mays] gi|195608562|gb|ACG26111.1| NADH-ubiquinone oxidoreductase 18 kDa subunit [Zea mays] Length = 157 Score = 80.5 bits (198), Expect = 6e-14, Method: Composition-based stats. Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 3/67 (4%) Query: 7 ITPPYIEPLLGYTSSKDTLQQVK---LFFPSLEAAEKYASDHGIQYCVIPSCKESQKELS 63 T + PL+G+TS+ D V L F S E+A+ +A HG Y V K + Sbjct: 82 STQKWENPLMGWTSTGDPYANVGEAGLTFNSAESAKAFAEKHGWNYVVRKRHTPLLKPKA 141 Query: 64 YQRNFSY 70 Y NF + Sbjct: 142 YAENFKW 148 >gi|154286262|ref|XP_001543926.1| NADH-ubiquinone oxidoreductase 21 kDa subunit, mitochondrial precursor [Ajellomyces capsulatus NAm1] gi|150407567|gb|EDN03108.1| NADH-ubiquinone oxidoreductase 21 kDa subunit, mitochondrial precursor [Ajellomyces capsulatus NAm1] Length = 225 Score = 80.5 bits (198), Expect = 7e-14, Method: Composition-based stats. Identities = 20/59 (33%), Positives = 29/59 (49%) Query: 10 PYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKELSYQRNF 68 + PL+G+ SS D +Q L F S E A +A G +Y V K + + +Y NF Sbjct: 154 RWENPLMGWQSSADAMQATHLDFKSKEDAISFAEKQGYEYFVQEPNKRAFRPKAYANNF 212 >gi|170045674|ref|XP_001850425.1| NADH:ubiquinone dehydrogenase [Culex quinquefasciatus] gi|167868627|gb|EDS32010.1| NADH:ubiquinone dehydrogenase [Culex quinquefasciatus] Length = 185 Score = 80.5 bits (198), Expect = 7e-14, Method: Composition-based stats. Identities = 18/72 (25%), Positives = 38/72 (52%), Gaps = 2/72 (2%) Query: 3 EFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSC-KESQKE 61 EF+ + PL+G++SS D L +++ F S E A + +G ++ V ++ + Sbjct: 109 EFDTRE-RWENPLMGWSSSGDPLSNMRVDFGSAEEAISHCERNGWRWFVDQPQAEKKARV 167 Query: 62 LSYQRNFSYDRL 73 +Y NF++++ Sbjct: 168 KNYGINFAWNKR 179 >gi|156032924|ref|XP_001585299.1| hypothetical protein SS1G_13868 [Sclerotinia sclerotiorum 1980] gi|154699270|gb|EDN99008.1| hypothetical protein SS1G_13868 [Sclerotinia sclerotiorum 1980 UF-70] Length = 222 Score = 80.5 bits (198), Expect = 7e-14, Method: Composition-based stats. Identities = 16/62 (25%), Positives = 29/62 (46%) Query: 10 PYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKELSYQRNFS 69 + PL+G+ SS D +Q + F + E A ++A G ++ V + +Y NF Sbjct: 151 RWENPLMGWQSSADFMQGTHINFKTKEDAIRFAEKQGYEFFVQEPNERKVAPKAYANNFL 210 Query: 70 YD 71 + Sbjct: 211 WS 212 >gi|159474980|ref|XP_001695601.1| NADH:ubiquinone oxidoreductase 18 kDa subunit [Chlamydomonas reinhardtii] gi|34334026|gb|AAQ64640.1| NADH:ubiquinone oxidoreductase 18 kD-like subunit [Chlamydomonas reinhardtii] gi|158275612|gb|EDP01388.1| NADH:ubiquinone oxidoreductase 18 kDa subunit [Chlamydomonas reinhardtii] Length = 187 Score = 80.5 bits (198), Expect = 7e-14, Method: Composition-based stats. Identities = 25/79 (31%), Positives = 37/79 (46%), Gaps = 8/79 (10%) Query: 3 EFEKITPPYIEPLLGYTSSKDTLQQV---KLFFPSLEAAEKYASDHGIQYCVIPSCK--- 56 EFE T + PL+G+TSS D L+ V L F + E A ++ G +Y V K Sbjct: 95 EFEP-TAKWQNPLMGWTSSADPLENVGRSALVFYTKEEAMRFCEKLGWEYEVTEPNKRRT 153 Query: 57 -ESQKELSYQRNFSYDRLE 74 +++ + Y NF R Sbjct: 154 QRTKRYMQYGDNFGTKRAG 172 >gi|331231873|ref|XP_003328599.1| hypothetical protein PGTG_10558 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309307589|gb|EFP84180.1| hypothetical protein PGTG_10558 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 188 Score = 80.1 bits (197), Expect = 8e-14, Method: Composition-based stats. Identities = 22/73 (30%), Positives = 33/73 (45%), Gaps = 2/73 (2%) Query: 1 MLEFE--KITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKES 58 +L++E + + PL+G+ S+ D +Q L F S EAA + G Y V Sbjct: 106 VLDWETLQGAGRWENPLMGWASTADYMQGTNLKFDSSEAAVAFCEKQGWPYFVQAPKAIK 165 Query: 59 QKELSYQRNFSYD 71 K SY N+ Y Sbjct: 166 FKVKSYSDNYLYS 178 >gi|296815418|ref|XP_002848046.1| NADH-ubiquinone oxidoreductase subunit [Arthroderma otae CBS 113480] gi|238841071|gb|EEQ30733.1| NADH-ubiquinone oxidoreductase subunit [Arthroderma otae CBS 113480] Length = 221 Score = 80.1 bits (197), Expect = 8e-14, Method: Composition-based stats. Identities = 19/59 (32%), Positives = 29/59 (49%) Query: 10 PYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKELSYQRNF 68 + PL+G+ SS D +Q L F S E A ++A G +Y V + + +Y NF Sbjct: 150 RWENPLMGWQSSADAMQGTHLNFRSKEDAIRFAEKQGYEYFVQEPNERVFRPKAYANNF 208 >gi|218461427|ref|ZP_03501518.1| hypothetical protein RetlK5_18872 [Rhizobium etli Kim 5] Length = 96 Score = 80.1 bits (197), Expect = 9e-14, Method: Composition-based stats. Identities = 26/51 (50%), Positives = 37/51 (72%) Query: 2 LEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVI 52 L F++ + P+IEPLLGYT S +TL QV+L FP+LE+A +YA G+ Y + Sbjct: 13 LVFDRCSAPFIEPLLGYTGSGETLVQVELKFPTLESAIRYAERQGLDYFLQ 63 >gi|195642452|gb|ACG40694.1| NADH-ubiquinone oxidoreductase 18 kDa subunit [Zea mays] Length = 157 Score = 80.1 bits (197), Expect = 9e-14, Method: Composition-based stats. Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 3/67 (4%) Query: 7 ITPPYIEPLLGYTSSKDTLQQVK---LFFPSLEAAEKYASDHGIQYCVIPSCKESQKELS 63 T + PL+G+TS+ D V L F S E+A+ +A HG Y V K + Sbjct: 82 STQKWENPLMGWTSTGDPYANVGEAGLTFNSAESAKAFAEKHGWNYVVRKRHTPLLKPKA 141 Query: 64 YQRNFSY 70 Y NF + Sbjct: 142 YAENFKW 148 >gi|195133692|ref|XP_002011273.1| GI16090 [Drosophila mojavensis] gi|193907248|gb|EDW06115.1| GI16090 [Drosophila mojavensis] Length = 176 Score = 80.1 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 19/72 (26%), Positives = 36/72 (50%), Gaps = 2/72 (2%) Query: 3 EFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVI-PSCKESQKE 61 EF+ + PL+G+ S+ D L + + F S E A Y +G ++ V + ++ Sbjct: 100 EFDNRE-RWENPLMGWASTGDPLSNLNVKFGSKEEAITYCERNGWRWFVDGDLKPKKERV 158 Query: 62 LSYQRNFSYDRL 73 +Y NFS+++ Sbjct: 159 KNYGINFSWNKR 170 >gi|225438227|ref|XP_002265704.1| PREDICTED: hypothetical protein [Vitis vinifera] gi|147858131|emb|CAN83933.1| hypothetical protein VITISV_035766 [Vitis vinifera] Length = 154 Score = 80.1 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 3/67 (4%) Query: 7 ITPPYIEPLLGYTSSKDTLQQVK---LFFPSLEAAEKYASDHGIQYCVIPSCKESQKELS 63 T + PL+G+TS+ D V L F S EAA+ +A HG +Y V K + Sbjct: 80 STQKWENPLMGWTSTGDPYANVGDAGLGFDSEEAAKAFAEKHGWEYTVKKRQTPLLKTKA 139 Query: 64 YQRNFSY 70 Y NF + Sbjct: 140 YADNFKW 146 >gi|195567715|ref|XP_002107404.1| GD17444 [Drosophila simulans] gi|194204811|gb|EDX18387.1| GD17444 [Drosophila simulans] Length = 183 Score = 79.8 bits (196), Expect = 1e-13, Method: Composition-based stats. Identities = 18/72 (25%), Positives = 38/72 (52%), Gaps = 2/72 (2%) Query: 3 EFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVI-PSCKESQKE 61 EF+ + PL+G++SS D L + + F S E A + +G ++ V + + ++ Sbjct: 107 EFDNRE-RWENPLMGWSSSGDPLSNMNVQFGSPEEAITFCERNGWRWYVDGAAKPKKERV 165 Query: 62 LSYQRNFSYDRL 73 +Y NF++++ Sbjct: 166 KNYGINFAWNKR 177 >gi|195345707|ref|XP_002039410.1| GM22960 [Drosophila sechellia] gi|194134636|gb|EDW56152.1| GM22960 [Drosophila sechellia] Length = 183 Score = 79.8 bits (196), Expect = 1e-13, Method: Composition-based stats. Identities = 18/72 (25%), Positives = 38/72 (52%), Gaps = 2/72 (2%) Query: 3 EFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVI-PSCKESQKE 61 EF+ + PL+G++SS D L + + F S E A + +G ++ V + + ++ Sbjct: 107 EFDNRE-RWENPLMGWSSSGDPLSNMNVQFGSPEEAITFCERNGWRWYVDGAAKPKKERV 165 Query: 62 LSYQRNFSYDRL 73 +Y NF++++ Sbjct: 166 KNYGINFAWNKR 177 >gi|255948312|ref|XP_002564923.1| Pc22g09110 [Penicillium chrysogenum Wisconsin 54-1255] gi|211591940|emb|CAP98199.1| Pc22g09110 [Penicillium chrysogenum Wisconsin 54-1255] Length = 219 Score = 79.8 bits (196), Expect = 1e-13, Method: Composition-based stats. Identities = 20/59 (33%), Positives = 27/59 (45%) Query: 10 PYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKELSYQRNF 68 + PL+G+ SS D +Q L F S E A +A G +Y V + SY NF Sbjct: 148 RWENPLMGWQSSADGMQGTHLKFKSKEDAIAFAQKQGYEYFVQEPNERRFVPKSYANNF 206 >gi|326492291|dbj|BAK01929.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 158 Score = 79.8 bits (196), Expect = 1e-13, Method: Composition-based stats. Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 3/67 (4%) Query: 7 ITPPYIEPLLGYTSSKDTLQQVK---LFFPSLEAAEKYASDHGIQYCVIPSCKESQKELS 63 T + PL+G+TS+ D V L F S E+A+ +A HG +Y V K + Sbjct: 82 STQKWENPLMGWTSTGDPYANVGEAGLTFDSAESAKAFADKHGWEYVVRKRHTPLLKPKT 141 Query: 64 YQRNFSY 70 Y NF + Sbjct: 142 YAENFKW 148 >gi|56755281|gb|AAW25820.1| SJCHGC05603 protein [Schistosoma japonicum] gi|226466678|emb|CAX69474.1| NADH dehydrogenase [Schistosoma japonicum] Length = 197 Score = 79.4 bits (195), Expect = 1e-13, Method: Composition-based stats. Identities = 20/71 (28%), Positives = 32/71 (45%), Gaps = 1/71 (1%) Query: 3 EFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKEL 62 EF+ + PL+G+ S+ D L + F + EAAE++ G V Sbjct: 122 EFDNRE-RWENPLMGWASTGDPLSNTVVEFETSEAAEEFCRRQGWPCYVEQPNLLKMSVK 180 Query: 63 SYQRNFSYDRL 73 SY NFS+++ Sbjct: 181 SYGSNFSWNKR 191 >gi|116194386|ref|XP_001223005.1| hypothetical protein CHGG_03791 [Chaetomium globosum CBS 148.51] gi|88179704|gb|EAQ87172.1| hypothetical protein CHGG_03791 [Chaetomium globosum CBS 148.51] Length = 208 Score = 79.4 bits (195), Expect = 1e-13, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 27/62 (43%) Query: 10 PYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKELSYQRNFS 69 + PL+G+ SS D +Q + F S E A +A G +Y V +Y NF Sbjct: 137 RWENPLMGWQSSGDFMQGTHIHFKSKEDAIAFAEKQGYEYFVQEPNARKFAPKAYANNFL 196 Query: 70 YD 71 Y Sbjct: 197 YS 198 >gi|327299398|ref|XP_003234392.1| NADH-ubiquinone oxidoreductase subunit [Trichophyton rubrum CBS 118892] gi|326463286|gb|EGD88739.1| NADH-ubiquinone oxidoreductase 21 kDa subunit [Trichophyton rubrum CBS 118892] Length = 225 Score = 79.4 bits (195), Expect = 1e-13, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 29/59 (49%) Query: 10 PYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKELSYQRNF 68 + PL+G+ SS D +Q + F S E A ++A G +Y V + + +Y NF Sbjct: 154 RWENPLMGWQSSADAMQGTHINFKSKEDAIRFAEKQGYEYFVQEPNERVFRPKAYANNF 212 >gi|159467431|ref|XP_001691895.1| NADH:ubiquinone oxidoreductase subunit [Chlamydomonas reinhardtii] gi|158278622|gb|EDP04385.1| NADH:ubiquinone oxidoreductase subunit [Chlamydomonas reinhardtii] Length = 201 Score = 79.4 bits (195), Expect = 1e-13, Method: Composition-based stats. Identities = 23/79 (29%), Positives = 35/79 (44%), Gaps = 6/79 (7%) Query: 2 LEFEKITPPYIEPLLGYTSSKDTLQQ--VKLFFPSLEAAEKYASDHGIQYCVIPSC---- 55 +E+ +I PL+G+TSS DT Q V F + E A + G +Y + Sbjct: 73 MEYLDPADKWINPLIGWTSSADTKHQAAVNFQFYTAEEAIAFCERQGWEYEIQVPQIPRD 132 Query: 56 KESQKELSYQRNFSYDRLE 74 S++ +Y NFS R Sbjct: 133 TRSRRYAAYGDNFSIKRHG 151 >gi|154294499|ref|XP_001547690.1| NADH-ubiquinone oxidoreductase 21kDa subunit [Botryotinia fuckeliana B05.10] gi|150844692|gb|EDN19885.1| NADH-ubiquinone oxidoreductase 21kDa subunit [Botryotinia fuckeliana B05.10] Length = 219 Score = 79.4 bits (195), Expect = 1e-13, Method: Composition-based stats. Identities = 17/62 (27%), Positives = 28/62 (45%) Query: 10 PYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKELSYQRNFS 69 + PL+G+ SS D +Q + F + E A ++A G +Y V +Y NF Sbjct: 148 RWENPLMGWQSSADFMQGTNVNFKTKEDAIRFAEKQGYEYFVQEPNVRKVAPKAYANNFL 207 Query: 70 YD 71 + Sbjct: 208 WS 209 >gi|18860539|ref|NP_573385.1| CG12203 [Drosophila melanogaster] gi|17944526|gb|AAL48151.1| RH17496p [Drosophila melanogaster] gi|22832565|gb|AAN09490.1| CG12203 [Drosophila melanogaster] gi|220958378|gb|ACL91732.1| CG12203-PA [synthetic construct] Length = 183 Score = 79.4 bits (195), Expect = 1e-13, Method: Composition-based stats. Identities = 18/72 (25%), Positives = 37/72 (51%), Gaps = 2/72 (2%) Query: 3 EFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVI-PSCKESQKE 61 EF+ + PL+G+ SS D L + + F S E A + +G ++ V + + ++ Sbjct: 107 EFDNRE-RWENPLMGWASSGDPLSNMNVQFGSPEEAITFCERNGWRWYVDGAAKPKKERV 165 Query: 62 LSYQRNFSYDRL 73 +Y NF++++ Sbjct: 166 KNYGINFAWNKR 177 >gi|323508046|emb|CBQ67917.1| probable NADH-ubiquinone oxidoreductase 21 kDa subunit, mitochondrial precursor [Sporisorium reilianum] Length = 185 Score = 79.4 bits (195), Expect = 1e-13, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 26/63 (41%) Query: 6 KITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKELSYQ 65 + + + PL+G+ SS D LQ L F S E A + G Y V SY Sbjct: 110 QGSARWENPLMGWASSGDYLQGTSLKFRSKEDAIHFCEKQGWDYQVTEPKVARIPPKSYA 169 Query: 66 RNF 68 N+ Sbjct: 170 ANY 172 >gi|198418099|ref|XP_002129144.1| PREDICTED: similar to MGC85528 protein [Ciona intestinalis] Length = 192 Score = 79.4 bits (195), Expect = 1e-13, Method: Composition-based stats. Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 3/72 (4%) Query: 5 EKITP-PYIEPLLGYTSSKDTLQQVK--LFFPSLEAAEKYASDHGIQYCVIPSCKESQKE 61 E T + P +G++SS D L + L F S + A + G + V + ++ + Sbjct: 115 EPETRERWENPTMGWSSSADPLSNISMALSFNSKDDAISFVERQGWSWFVDEAKEKKMQP 174 Query: 62 LSYQRNFSYDRL 73 SY NFS+D+ Sbjct: 175 KSYAANFSWDKR 186 >gi|315052526|ref|XP_003175637.1| NADH-ubiquinone oxidoreductase subunit [Arthroderma gypseum CBS 118893] gi|311340952|gb|EFR00155.1| NADH-ubiquinone oxidoreductase subunit [Arthroderma gypseum CBS 118893] Length = 225 Score = 79.4 bits (195), Expect = 2e-13, Method: Composition-based stats. Identities = 19/59 (32%), Positives = 29/59 (49%) Query: 10 PYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKELSYQRNF 68 + PL+G+ SS D +Q L F S E A ++A G +Y V + + +Y NF Sbjct: 154 RWENPLMGWQSSADAMQGTHLNFRSKEDAIRFAEKQGYEYFVQEPNERVFRPKAYANNF 212 >gi|218516452|ref|ZP_03513292.1| hypothetical protein Retl8_23756 [Rhizobium etli 8C-3] Length = 203 Score = 79.4 bits (195), Expect = 2e-13, Method: Composition-based stats. Identities = 27/51 (52%), Positives = 37/51 (72%) Query: 2 LEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVI 52 L FE+ + P+IEPLLGYT S +TL QV+L FP+LE+A +YA G+ Y + Sbjct: 64 LVFERCSAPFIEPLLGYTGSGETLVQVELKFPTLESAIRYAERQGLDYLLQ 114 >gi|296088915|emb|CBI38470.3| unnamed protein product [Vitis vinifera] Length = 114 Score = 79.4 bits (195), Expect = 2e-13, Method: Composition-based stats. Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 3/67 (4%) Query: 7 ITPPYIEPLLGYTSSKDTLQQVK---LFFPSLEAAEKYASDHGIQYCVIPSCKESQKELS 63 T + PL+G+TS+ D V L F S EAA+ +A HG +Y V K + Sbjct: 40 STQKWENPLMGWTSTGDPYANVGDAGLGFDSEEAAKAFAEKHGWEYTVKKRQTPLLKTKA 99 Query: 64 YQRNFSY 70 Y NF + Sbjct: 100 YADNFKW 106 >gi|190890950|ref|YP_001977492.1| hypothetical protein RHECIAT_CH0001333 [Rhizobium etli CIAT 652] gi|190696229|gb|ACE90314.1| hypothetical conserved protein [Rhizobium etli CIAT 652] Length = 203 Score = 79.4 bits (195), Expect = 2e-13, Method: Composition-based stats. Identities = 27/51 (52%), Positives = 37/51 (72%) Query: 2 LEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVI 52 L FE+ + P+IEPLLGYT S +TL QV+L FP+LE+A +YA G+ Y + Sbjct: 64 LVFERCSAPFIEPLLGYTGSGETLVQVELKFPTLESAIRYAERQGLDYLLQ 114 >gi|303281792|ref|XP_003060188.1| predicted protein [Micromonas pusilla CCMP1545] gi|226458843|gb|EEH56140.1| predicted protein [Micromonas pusilla CCMP1545] Length = 146 Score = 79.0 bits (194), Expect = 2e-13, Method: Composition-based stats. Identities = 28/91 (30%), Positives = 37/91 (40%), Gaps = 19/91 (20%) Query: 7 ITPPYIEPLLGYTSSKDTLQ-QVKLF--FPSLEAAEKYASDHGIQYCVIPSC-------- 55 + PL+G+TS+ D L Q+ F S EAA K+A HG +Y V+ Sbjct: 46 EQQKWENPLMGWTSTGDALAHQMNSTCVFNSKEAAIKFAEKHGWEYEVMEPQKFDARGAS 105 Query: 56 ------KESQKELSYQRNFSYDRLE--PWTH 78 K + SY NFS R W H Sbjct: 106 TIPGAGKIHTRPKSYGDNFSSARKGTPVWPH 136 >gi|302495891|ref|XP_003009959.1| hypothetical protein ARB_03885 [Arthroderma benhamiae CBS 112371] gi|291173481|gb|EFE29314.1| hypothetical protein ARB_03885 [Arthroderma benhamiae CBS 112371] Length = 221 Score = 79.0 bits (194), Expect = 2e-13, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 29/59 (49%) Query: 10 PYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKELSYQRNF 68 + PL+G+ SS D +Q + F S E A ++A G +Y V + + +Y NF Sbjct: 150 RWENPLMGWQSSADAMQGTHINFRSKEDAIRFAEKQGYEYFVQEPNERVFRPKAYANNF 208 >gi|302655101|ref|XP_003019345.1| hypothetical protein TRV_06626 [Trichophyton verrucosum HKI 0517] gi|291183061|gb|EFE38700.1| hypothetical protein TRV_06626 [Trichophyton verrucosum HKI 0517] Length = 221 Score = 79.0 bits (194), Expect = 2e-13, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 29/59 (49%) Query: 10 PYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKELSYQRNF 68 + PL+G+ SS D +Q + F S E A ++A G +Y V + + +Y NF Sbjct: 150 RWENPLMGWQSSADAMQGTHINFRSKEDAIRFAEKQGYEYFVQEPNERVFRPKAYANNF 208 >gi|324523965|gb|ADY48334.1| NADH dehydrogenase [ubiquinone] iron-sulfur protein 4 [Ascaris suum] Length = 176 Score = 79.0 bits (194), Expect = 2e-13, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 28/63 (44%), Gaps = 2/63 (3%) Query: 10 PYIEPLLGYTSSKDTLQQVKLF--FPSLEAAEKYASDHGIQYCVIPSCKESQKELSYQRN 67 + PL+G+ S+ D L + + F S E A + + Y V + K +Y N Sbjct: 105 RWENPLMGWASTGDPLSNISMNMDFASKEDAINFCVKNRWNYEVDEPHERHIKPKAYGSN 164 Query: 68 FSY 70 FS+ Sbjct: 165 FSW 167 >gi|169858188|ref|XP_001835740.1| NADH-ubiquinone oxidoreductase 21kDa subunit [Coprinopsis cinerea okayama7#130] gi|116503190|gb|EAU86085.1| NADH-ubiquinone oxidoreductase 21kDa subunit [Coprinopsis cinerea okayama7#130] Length = 174 Score = 79.0 bits (194), Expect = 2e-13, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 29/65 (44%) Query: 6 KITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKELSYQ 65 + PL+G+ SS D +Q +L F S E A +A G Y V P + +Y Sbjct: 99 PGGSRWENPLMGWASSADYMQGTRLTFRSKEDAAHFAEKQGWDYYVQPPEVKRIPPKNYA 158 Query: 66 RNFSY 70 NF Y Sbjct: 159 ENFVY 163 >gi|194762994|ref|XP_001963619.1| GF20193 [Drosophila ananassae] gi|190629278|gb|EDV44695.1| GF20193 [Drosophila ananassae] Length = 181 Score = 78.6 bits (193), Expect = 2e-13, Method: Composition-based stats. Identities = 19/72 (26%), Positives = 36/72 (50%), Gaps = 2/72 (2%) Query: 3 EFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVI-PSCKESQKE 61 EF+ + PL+G+ S+ D L + + F S E A Y +G ++ V + ++ Sbjct: 105 EFDNRD-RWENPLMGWASTGDPLSNLNVQFGSQEEAITYCERNGWRWYVDGAEKPKKERV 163 Query: 62 LSYQRNFSYDRL 73 +Y NFS+++ Sbjct: 164 KNYGINFSWNKR 175 >gi|326474025|gb|EGD98034.1| NADH-ubiquinone oxidoreductase 18 kDa subunit [Trichophyton tonsurans CBS 112818] gi|326478222|gb|EGE02232.1| NADH-ubiquinone oxidoreductase 18 kDa subunit [Trichophyton equinum CBS 127.97] Length = 225 Score = 78.6 bits (193), Expect = 3e-13, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 29/59 (49%) Query: 10 PYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKELSYQRNF 68 + PL+G+ SS D +Q + F S E A ++A G +Y V + + +Y NF Sbjct: 154 RWENPLMGWQSSADAMQGTHINFRSKEDAIRFAEKQGYEYFVQEPNERVFRPKAYANNF 212 >gi|239606266|gb|EEQ83253.1| NADH-ubiquinone oxidoreductase 21 kDa subunit [Ajellomyces dermatitidis ER-3] Length = 224 Score = 78.6 bits (193), Expect = 3e-13, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 28/59 (47%) Query: 10 PYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKELSYQRNF 68 + PL+G+ SS D +Q + F S E A +A G +Y V + + +Y NF Sbjct: 153 RWENPLMGWQSSADAMQATFIDFKSKEDAIAFAEKQGYEYFVQEPNQRVFRPKAYANNF 211 >gi|261188680|ref|XP_002620754.1| NADH-ubiquinone oxidoreductase 21 kDa subunit [Ajellomyces dermatitidis SLH14081] gi|239593112|gb|EEQ75693.1| NADH-ubiquinone oxidoreductase 21 kDa subunit [Ajellomyces dermatitidis SLH14081] gi|327355955|gb|EGE84812.1| NADH-ubiquinone oxidoreductase 21 kDa subunit [Ajellomyces dermatitidis ATCC 18188] Length = 224 Score = 78.2 bits (192), Expect = 3e-13, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 28/59 (47%) Query: 10 PYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKELSYQRNF 68 + PL+G+ SS D +Q + F S E A +A G +Y V + + +Y NF Sbjct: 153 RWENPLMGWQSSADAMQATFIDFKSKEDAIAFAEKQGYEYFVQEPNQRVFRPKAYANNF 211 >gi|108743713|gb|ABG02165.1| IP11020p [Drosophila melanogaster] Length = 158 Score = 78.2 bits (192), Expect = 4e-13, Method: Composition-based stats. Identities = 18/72 (25%), Positives = 37/72 (51%), Gaps = 2/72 (2%) Query: 3 EFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVI-PSCKESQKE 61 EF+ + PL+G+ SS D L + + F S E A + +G ++ V + + ++ Sbjct: 82 EFDNRE-RWENPLMGWASSGDPLSNMNVQFGSPEEAITFCERNGWRWYVDGAAKPKKERV 140 Query: 62 LSYQRNFSYDRL 73 +Y NF++++ Sbjct: 141 KNYGINFAWNKR 152 >gi|168031503|ref|XP_001768260.1| predicted protein [Physcomitrella patens subsp. patens] gi|162680438|gb|EDQ66874.1| predicted protein [Physcomitrella patens subsp. patens] Length = 115 Score = 78.2 bits (192), Expect = 4e-13, Method: Composition-based stats. Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 3/64 (4%) Query: 10 PYIEPLLGYTSSKDTLQQV---KLFFPSLEAAEKYASDHGIQYCVIPSCKESQKELSYQR 66 + PL+G+TS+ D Q V L F + E+A +A +G QY I + +Y Sbjct: 46 KWENPLMGWTSTGDPYQSVGEASLNFDTKESAVDFAEKYGWQYTPIKVVLRFLQPKAYAD 105 Query: 67 NFSY 70 NF + Sbjct: 106 NFKW 109 >gi|71003986|ref|XP_756659.1| hypothetical protein UM00512.1 [Ustilago maydis 521] gi|46095731|gb|EAK80964.1| hypothetical protein UM00512.1 [Ustilago maydis 521] Length = 185 Score = 77.8 bits (191), Expect = 4e-13, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 26/63 (41%) Query: 6 KITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKELSYQ 65 + + + PL+G+ SS D +Q L F S E A + G Y V SY Sbjct: 110 QGSARWENPLMGWASSGDYMQGTSLKFRSKEDAIHFCEKQGWDYHVTEPKVARIPPKSYA 169 Query: 66 RNF 68 N+ Sbjct: 170 ANY 172 >gi|119192750|ref|XP_001246981.1| hypothetical protein CIMG_00752 [Coccidioides immitis RS] gi|320033576|gb|EFW15523.1| NADH-ubiquinone oxidoreductase 21 kDa subunit [Coccidioides posadasii str. Silveira] Length = 225 Score = 77.4 bits (190), Expect = 5e-13, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 29/59 (49%) Query: 10 PYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKELSYQRNF 68 + PL+G+ SS D +Q + F S E A ++A G +Y V + + +Y NF Sbjct: 154 RWENPLMGWQSSADAMQGTHINFKSKEDAIRFAEKQGYEYYVQEPNERAFHPKAYANNF 212 >gi|303312611|ref|XP_003066317.1| NADH-ubiquinone oxidoreductase 21 kDa subunit, mitochondrial precursor, putative [Coccidioides posadasii C735 delta SOWgp] gi|240105979|gb|EER24172.1| NADH-ubiquinone oxidoreductase 21 kDa subunit, mitochondrial precursor, putative [Coccidioides posadasii C735 delta SOWgp] Length = 225 Score = 77.4 bits (190), Expect = 6e-13, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 29/59 (49%) Query: 10 PYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKELSYQRNF 68 + PL+G+ SS D +Q + F S E A ++A G +Y V + + +Y NF Sbjct: 154 RWENPLMGWQSSADAMQGTHINFKSKEDAIRFAEKQGYEYYVQEPNERAFHPKAYANNF 212 >gi|240274892|gb|EER38407.1| NADH-ubiquinone oxidoreductase 21 kDa subunit [Ajellomyces capsulatus H143] gi|325094243|gb|EGC47553.1| NADH-ubiquinone oxidoreductase [Ajellomyces capsulatus H88] Length = 225 Score = 77.4 bits (190), Expect = 6e-13, Method: Composition-based stats. Identities = 20/59 (33%), Positives = 28/59 (47%) Query: 10 PYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKELSYQRNF 68 + PL G+ SS D +Q L F S E A +A G +Y V K + + +Y NF Sbjct: 154 RWENPLTGWQSSADAMQATHLDFKSKEDAISFAEKQGYEYFVQEPNKRAFRPKAYANNF 212 >gi|302688529|ref|XP_003033944.1| hypothetical protein SCHCODRAFT_53560 [Schizophyllum commune H4-8] gi|300107639|gb|EFI99041.1| hypothetical protein SCHCODRAFT_53560 [Schizophyllum commune H4-8] Length = 121 Score = 77.4 bits (190), Expect = 6e-13, Method: Composition-based stats. Identities = 21/62 (33%), Positives = 30/62 (48%) Query: 10 PYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKELSYQRNFS 69 + PL+GY SS D +Q V++ F + E A +A G Y V P + +Y NF Sbjct: 50 RWENPLMGYASSADYVQGVRMSFRTKEDAVHFAEKQGWDYYVYPPMVKRIPPKNYAENFL 109 Query: 70 YD 71 Y Sbjct: 110 YR 111 >gi|67901020|ref|XP_680766.1| hypothetical protein AN7497.2 [Aspergillus nidulans FGSC A4] gi|40742887|gb|EAA62077.1| hypothetical protein AN7497.2 [Aspergillus nidulans FGSC A4] gi|259483807|tpe|CBF79499.1| TPA: NADH-ubiquinone oxidoreductase 18 kDa subunit, putative (AFU_orthologue; AFUA_2G05500) [Aspergillus nidulans FGSC A4] Length = 221 Score = 77.4 bits (190), Expect = 7e-13, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 27/59 (45%) Query: 10 PYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKELSYQRNF 68 + PL+G+ SS D +Q L F + E A +A G +Y V + +Y NF Sbjct: 150 RWENPLMGWQSSADAMQGTHLNFKTKEDAILFAQKQGYEYFVQEPNERKFVPKAYANNF 208 >gi|212532939|ref|XP_002146626.1| NADH-ubiquinone oxidoreductase 18 kDa subunit, putative [Penicillium marneffei ATCC 18224] gi|210071990|gb|EEA26079.1| NADH-ubiquinone oxidoreductase 18 kDa subunit, putative [Penicillium marneffei ATCC 18224] Length = 216 Score = 77.1 bits (189), Expect = 7e-13, Method: Composition-based stats. Identities = 19/59 (32%), Positives = 27/59 (45%) Query: 10 PYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKELSYQRNF 68 + PL+G+ SS D LQ + F S E A +A G +Y V + +Y NF Sbjct: 145 RWENPLMGWQSSGDVLQGTHINFKSKEDAILFAQKQGYEYFVQEPNERKFVPKAYANNF 203 >gi|302854027|ref|XP_002958525.1| NADH:ubiquinone oxidoreductase 18 kDa subunit [Volvox carteri f. nagariensis] gi|300256172|gb|EFJ40445.1| NADH:ubiquinone oxidoreductase 18 kDa subunit [Volvox carteri f. nagariensis] Length = 183 Score = 77.1 bits (189), Expect = 7e-13, Method: Composition-based stats. Identities = 23/79 (29%), Positives = 34/79 (43%), Gaps = 8/79 (10%) Query: 3 EFEKITPPYIEPLLGYTSSKDTLQQV---KLFFPSLEAAEKYASDHGIQYCVIPSCKES- 58 EFE + PL+G+TS+ D L+ V L F + E A+++ HG Y V Sbjct: 95 EFE-TLSKWTNPLMGWTSTADPLENVGRATLAFHTKEEAQRFCEKHGWSYTVDVPNIRRT 153 Query: 59 ---QKELSYQRNFSYDRLE 74 ++ Y NF R Sbjct: 154 VRQKRYAGYGDNFGIKRNG 172 >gi|70989659|ref|XP_749679.1| NADH-ubiquinone oxidoreductase 18 kDa subunit [Aspergillus fumigatus Af293] gi|66847310|gb|EAL87641.1| NADH-ubiquinone oxidoreductase 18 kDa subunit, putative [Aspergillus fumigatus Af293] gi|159129086|gb|EDP54200.1| NADH-ubiquinone oxidoreductase 18 kDa subunit, putative [Aspergillus fumigatus A1163] Length = 270 Score = 77.1 bits (189), Expect = 7e-13, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 27/59 (45%) Query: 10 PYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKELSYQRNF 68 + PL+G+ SS D +Q L F + E A +A G +Y V + +Y NF Sbjct: 199 RWENPLMGWQSSGDFMQGTHLNFKTKEDAILFAQKQGYEYFVQEPNERRFVPKAYANNF 257 >gi|197103178|ref|YP_002128556.1| hypothetical protein PHZ_p0038 [Phenylobacterium zucineum HLK1] gi|196480454|gb|ACG79981.1| conserved hypothetical protein [Phenylobacterium zucineum HLK1] Length = 281 Score = 76.7 bits (188), Expect = 9e-13, Method: Composition-based stats. Identities = 23/52 (44%), Positives = 31/52 (59%) Query: 2 LEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIP 53 L F + P +EPL+G+ S D LQQV L FP+ EAA Y HG+++ V Sbjct: 95 LRFAARSAPRVEPLMGWLESTDPLQQVNLRFPTAEAAIGYCRRHGLEFEVHA 146 >gi|46111185|ref|XP_382650.1| hypothetical protein FG02474.1 [Gibberella zeae PH-1] Length = 197 Score = 76.7 bits (188), Expect = 9e-13, Method: Composition-based stats. Identities = 19/68 (27%), Positives = 27/68 (39%) Query: 6 KITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKELSYQ 65 + PL+G+ SS D +Q + F S E A +A G +Y V +Y Sbjct: 122 PKGHRWENPLMGWQSSGDFMQGTHINFESKEDAIHFAEKQGYEYFVQEPNSRKFAPKAYA 181 Query: 66 RNFSYDRL 73 NF Y Sbjct: 182 NNFLYSAR 189 >gi|322709929|gb|EFZ01504.1| NADH-ubiquinone oxidoreductase 21kDa subunit [Metarhizium anisopliae ARSEF 23] Length = 195 Score = 76.7 bits (188), Expect = 1e-12, Method: Composition-based stats. Identities = 19/66 (28%), Positives = 27/66 (40%) Query: 6 KITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKELSYQ 65 + PL+G+ SS D +Q + F S E A +A G +Y V +Y Sbjct: 120 PKGHRWENPLMGWQSSGDFMQGTHVNFKSKEDAIHFAEKQGYEYFVQEPNSRKFTPKAYA 179 Query: 66 RNFSYD 71 NF Y Sbjct: 180 NNFLYS 185 >gi|119480287|ref|XP_001260172.1| NADH-ubiquinone oxidoreductase 18 kDa subunit, putative [Neosartorya fischeri NRRL 181] gi|119408326|gb|EAW18275.1| NADH-ubiquinone oxidoreductase 18 kDa subunit, putative [Neosartorya fischeri NRRL 181] Length = 219 Score = 76.7 bits (188), Expect = 1e-12, Method: Composition-based stats. Identities = 19/59 (32%), Positives = 27/59 (45%) Query: 10 PYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKELSYQRNF 68 + PL+G+ SS D +Q L F S E A +A G +Y V + +Y NF Sbjct: 148 RWENPLMGWQSSGDFMQGTHLNFKSKEDAILFAQKQGYEYFVQEPNERRFVPKAYANNF 206 >gi|115400653|ref|XP_001215915.1| NADH-ubiquinone oxidoreductase 21 kDa subunit, mitochondrial precursor [Aspergillus terreus NIH2624] gi|114191581|gb|EAU33281.1| NADH-ubiquinone oxidoreductase 21 kDa subunit, mitochondrial precursor [Aspergillus terreus NIH2624] Length = 219 Score = 76.3 bits (187), Expect = 1e-12, Method: Composition-based stats. Identities = 19/59 (32%), Positives = 27/59 (45%) Query: 10 PYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKELSYQRNF 68 + PL+G+ SS D +Q L F S E A +A G +Y V + +Y NF Sbjct: 148 RWENPLMGWQSSADCMQGTHLNFKSKEDAIMFAQKQGYEYFVQEPNERRFVPKAYANNF 206 >gi|320591555|gb|EFX03994.1| NADH-ubiquinone oxidoreductase [Grosmannia clavigera kw1407] Length = 215 Score = 76.3 bits (187), Expect = 1e-12, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 28/62 (45%) Query: 10 PYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKELSYQRNFS 69 + PL+G+ SS D +Q + F S E A +A G +Y V + S + Y F Sbjct: 144 RWENPLMGWQSSADFMQGTHINFKSKEDAIAFAEKQGYEYFVQEPKERSFRPKQYASQFM 203 Query: 70 YD 71 Y Sbjct: 204 YS 205 >gi|256073853|ref|XP_002573242.1| hypothetical protein [Schistosoma mansoni] gi|238658418|emb|CAZ29474.1| expressed protein [Schistosoma mansoni] Length = 197 Score = 76.3 bits (187), Expect = 1e-12, Method: Composition-based stats. Identities = 20/71 (28%), Positives = 32/71 (45%), Gaps = 1/71 (1%) Query: 3 EFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKEL 62 EF+ + PL+G+ SS D L + F + +AAE++ G V Sbjct: 122 EFDNRE-RWENPLMGWASSGDPLSNTVVEFETSKAAEEFCQRQGWPCYVESPNILKMNIK 180 Query: 63 SYQRNFSYDRL 73 SY NFS+++ Sbjct: 181 SYGSNFSWNKR 191 >gi|322693945|gb|EFY85789.1| NADH-ubiquinone oxidoreductase 18 kDa subunit, putative [Metarhizium acridum CQMa 102] Length = 195 Score = 76.3 bits (187), Expect = 1e-12, Method: Composition-based stats. Identities = 19/66 (28%), Positives = 27/66 (40%) Query: 6 KITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKELSYQ 65 + PL+G+ SS D +Q + F S E A +A G +Y V +Y Sbjct: 120 PKGHRWENPLMGWQSSGDFMQGTHVNFKSKEDAIHFAEKQGYEYFVQEPNSRKFTPKAYA 179 Query: 66 RNFSYD 71 NF Y Sbjct: 180 NNFLYS 185 >gi|169769380|ref|XP_001819160.1| NADH-ubiquinone oxidoreductase subunit [Aspergillus oryzae RIB40] gi|238501848|ref|XP_002382158.1| NADH-ubiquinone oxidoreductase 18 kDa subunit, putative [Aspergillus flavus NRRL3357] gi|83767018|dbj|BAE57158.1| unnamed protein product [Aspergillus oryzae] gi|220692395|gb|EED48742.1| NADH-ubiquinone oxidoreductase 18 kDa subunit, putative [Aspergillus flavus NRRL3357] Length = 219 Score = 75.9 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 19/59 (32%), Positives = 27/59 (45%) Query: 10 PYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKELSYQRNF 68 + PL+G+ SS D +Q L F S E A +A G +Y V + +Y NF Sbjct: 148 RWENPLMGWQSSADNMQGTHLNFKSKEDAIMFAQKQGYEYFVQEPNERRFVPKAYANNF 206 >gi|302892461|ref|XP_003045112.1| predicted protein [Nectria haematococca mpVI 77-13-4] gi|256726037|gb|EEU39399.1| predicted protein [Nectria haematococca mpVI 77-13-4] Length = 197 Score = 75.9 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 19/66 (28%), Positives = 27/66 (40%) Query: 6 KITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKELSYQ 65 + PL+G+ SS D +Q + F S E A +A G +Y V +Y Sbjct: 122 PKGHRWENPLMGWQSSGDFMQGTHINFKSKEDAIHFAEKQGYEYFVQEPNSRKFAPKAYA 181 Query: 66 RNFSYD 71 NF Y Sbjct: 182 NNFLYS 187 >gi|289741441|gb|ADD19468.1| NADH-ubiquinone oxidoreductase NDUFS4/18 kDa subunit [Glossina morsitans morsitans] Length = 182 Score = 75.9 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 15/72 (20%), Positives = 36/72 (50%), Gaps = 2/72 (2%) Query: 3 EFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVI-PSCKESQKE 61 +F+ + PL+G+ S+ D L + + F + E A + +G + + ++ ++ Sbjct: 106 DFDNRE-RWENPLMGWCSTGDPLSNMHVNFNTPEEAITFCERNGWHWFIDGEEKQKKERV 164 Query: 62 LSYQRNFSYDRL 73 +Y NFS+++ Sbjct: 165 KNYGVNFSWNKR 176 >gi|289616857|emb|CBI56423.1| unnamed protein product [Sordaria macrospora] Length = 216 Score = 75.9 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 27/62 (43%) Query: 10 PYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKELSYQRNFS 69 + L+G+ SS D +Q L F + E A +A G +Y V + +Y NF Sbjct: 145 RWENQLMGWQSSGDFVQGTHLNFRTKEEAIAFAEKQGYEYFVQEPNQRHFTPKAYANNFL 204 Query: 70 YD 71 Y Sbjct: 205 YS 206 >gi|145245259|ref|XP_001394897.1| NADH-ubiquinone oxidoreductase subunit [Aspergillus niger CBS 513.88] gi|134079595|emb|CAK40812.1| unnamed protein product [Aspergillus niger] Length = 219 Score = 75.9 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 19/59 (32%), Positives = 27/59 (45%) Query: 10 PYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKELSYQRNF 68 + PL+G+ SS D +Q L F S E A +A G +Y V + +Y NF Sbjct: 148 RWENPLMGWQSSADCMQGTHLNFKSKEDAILFAQKQGYEYFVQEPNERRFVPKAYANNF 206 >gi|242776963|ref|XP_002478937.1| NADH-ubiquinone oxidoreductase 18 kDa subunit, putative [Talaromyces stipitatus ATCC 10500] gi|218722556|gb|EED21974.1| NADH-ubiquinone oxidoreductase 18 kDa subunit, putative [Talaromyces stipitatus ATCC 10500] Length = 216 Score = 75.9 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 27/59 (45%) Query: 10 PYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKELSYQRNF 68 + PL+G+ SS D +Q + F S E A +A G +Y V + +Y NF Sbjct: 145 RWENPLMGWQSSGDFMQGTHINFKSKEDAILFAQKQGYEYFVQEPNERKFVPKAYANNF 203 >gi|296413730|ref|XP_002836562.1| hypothetical protein [Tuber melanosporum Mel28] gi|295630389|emb|CAZ80753.1| unnamed protein product [Tuber melanosporum] Length = 209 Score = 75.5 bits (185), Expect = 2e-12, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 30/63 (47%) Query: 6 KITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKELSYQ 65 + PL+G+ SS D +Q +FF S E A +A G ++ V + + + SY Sbjct: 134 PKGHRWENPLMGWQSSGDFMQGTHIFFKSKEDAISFAEKQGYKWFVKEPNERAFRAKSYS 193 Query: 66 RNF 68 NF Sbjct: 194 ANF 196 >gi|158286319|ref|XP_308676.4| AGAP007082-PA [Anopheles gambiae str. PEST] gi|157020411|gb|EAA03929.4| AGAP007082-PA [Anopheles gambiae str. PEST] Length = 183 Score = 75.1 bits (184), Expect = 3e-12, Method: Composition-based stats. Identities = 17/72 (23%), Positives = 38/72 (52%), Gaps = 2/72 (2%) Query: 3 EFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVI-PSCKESQKE 61 EF+ + PL+G++S+ D L +++ F S + A + +G ++ V ++ + Sbjct: 107 EFDNRE-RWENPLMGWSSTGDPLSNMRVDFTSADEAIAHCEKNGWRWFVDKQEVQKKPRV 165 Query: 62 LSYQRNFSYDRL 73 +Y NFS+++ Sbjct: 166 KNYGINFSWNKR 177 >gi|328854644|gb|EGG03775.1| hypothetical protein MELLADRAFT_37766 [Melampsora larici-populina 98AG31] Length = 110 Score = 75.1 bits (184), Expect = 3e-12, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 26/62 (41%) Query: 10 PYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKELSYQRNFS 69 + PL+G+ SS D +Q +L F S A + G Y V K SY N+ Sbjct: 39 RWENPLMGWASSADYMQGTQLDFGSSNEAVAFCEKQGWPYYVQEPKTIKFKVKSYSDNYL 98 Query: 70 YD 71 Y Sbjct: 99 YS 100 >gi|121710076|ref|XP_001272654.1| NADH-ubiquinone oxidoreductase 18 kDa subunit, putative [Aspergillus clavatus NRRL 1] gi|119400804|gb|EAW11228.1| NADH-ubiquinone oxidoreductase 18 kDa subunit, putative [Aspergillus clavatus NRRL 1] Length = 219 Score = 75.1 bits (184), Expect = 3e-12, Method: Composition-based stats. Identities = 19/59 (32%), Positives = 26/59 (44%) Query: 10 PYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKELSYQRNF 68 + PL+G+ SS D +Q L F S E A +A G +Y V +Y NF Sbjct: 148 RWENPLMGWQSSGDFMQGTHLNFKSKEDAILFAQKQGYEYFVQEPNVRRFVPKAYANNF 206 >gi|225684278|gb|EEH22562.1| NADH dehydrogenase iron-sulfur protein [Paracoccidioides brasiliensis Pb03] gi|226293904|gb|EEH49324.1| NADH-ubiquinone oxidoreductase 21 kDa subunit [Paracoccidioides brasiliensis Pb18] Length = 225 Score = 75.1 bits (184), Expect = 3e-12, Method: Composition-based stats. Identities = 16/59 (27%), Positives = 27/59 (45%) Query: 10 PYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKELSYQRNF 68 + PL+G+ SS D +Q + F + A +A G +Y V + + +Y NF Sbjct: 154 RWENPLMGWQSSADAMQGTHINFKTKADAIAFAEKQGYEYFVQEPNQRAFYPKAYANNF 212 >gi|295670025|ref|XP_002795560.1| NADH-ubiquinone oxidoreductase 21 kDa subunit [Paracoccidioides brasiliensis Pb01] gi|226284645|gb|EEH40211.1| NADH-ubiquinone oxidoreductase 21 kDa subunit [Paracoccidioides brasiliensis Pb01] Length = 225 Score = 74.7 bits (183), Expect = 3e-12, Method: Composition-based stats. Identities = 16/59 (27%), Positives = 27/59 (45%) Query: 10 PYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKELSYQRNF 68 + PL+G+ SS D +Q + F + A +A G +Y V + + +Y NF Sbjct: 154 RWENPLMGWQSSADAMQGTHINFKTKADAIAFAEKQGYEYFVQEPNQRAFYPKAYANNF 212 >gi|157137192|ref|XP_001663929.1| NADH:ubiquinone dehydrogenase, putative [Aedes aegypti] gi|94469270|gb|ABF18484.1| mitochondrial NADH:ubiquinone oxidoreductase NDUFS4/18 kDa subunit [Aedes aegypti] gi|108869770|gb|EAT33995.1| NADH:ubiquinone dehydrogenase, putative [Aedes aegypti] Length = 185 Score = 74.7 bits (183), Expect = 4e-12, Method: Composition-based stats. Identities = 17/72 (23%), Positives = 36/72 (50%), Gaps = 2/72 (2%) Query: 3 EFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSC-KESQKE 61 EF+ + PL+G++S+ D L + + F S E A + +G ++ V + + Sbjct: 109 EFDNRE-RWENPLMGWSSTGDPLSNMHVEFGSAEEAINHCERNGWRWFVDNPEVVKKHRV 167 Query: 62 LSYQRNFSYDRL 73 +Y NF++++ Sbjct: 168 KNYGVNFAWNKR 179 >gi|170089301|ref|XP_001875873.1| predicted protein [Laccaria bicolor S238N-H82] gi|164649133|gb|EDR13375.1| predicted protein [Laccaria bicolor S238N-H82] Length = 123 Score = 74.4 bits (182), Expect = 5e-12, Method: Composition-based stats. Identities = 21/66 (31%), Positives = 29/66 (43%) Query: 6 KITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKELSYQ 65 + PL+GY+SS D +Q +L F S E A +A G Y V E +Y Sbjct: 48 PGGGRWENPLMGYSSSADYMQGTRLTFRSKEDAVHFAEKQGWDYYVQTPTVERIPPKNYA 107 Query: 66 RNFSYD 71 N+ Y Sbjct: 108 ENYVYR 113 >gi|297493936|gb|ADI40690.1| NADH dehydrogenase Fe-S protein 4, 18kDa [Scotophilus kuhlii] Length = 118 Score = 74.0 bits (181), Expect = 6e-12, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 27/59 (45%), Gaps = 1/59 (1%) Query: 2 LEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 +EF+ + PL+G+ S+ D L + L F + E A +A +G Y V K Sbjct: 61 MEFDTRE-RWENPLMGWASTADPLSNMVLNFSTKEDAVAFAEKNGWSYDVEEKKVPKPK 118 >gi|1092496|prf||2024210A NADH/ubiquinone oxidoreductase:SUBUNIT=21kD Length = 205 Score = 73.6 bits (180), Expect = 8e-12, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 28/62 (45%) Query: 10 PYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKELSYQRNFS 69 + L+G+ SS D +Q L F + E A ++A G +Y V + +Y NF Sbjct: 134 RWENELMGWQSSGDFVQGTHLTFRTKEEAIQFAEKQGYEYFVQEPNQRHFTPKAYANNFL 193 Query: 70 YD 71 Y Sbjct: 194 YS 195 >gi|85105072|ref|XP_961881.1| NADH:ubiquinone oxidoreductase 21kD subunit [Neurospora crassa OR74A] gi|1171876|sp|P25711|NDUS4_NEUCR RecName: Full=NADH-ubiquinone oxidoreductase 21 kDa subunit, mitochondrial; AltName: Full=Complex I-21kD; Short=CI-21kD; Flags: Precursor gi|28923464|gb|EAA32645.1| NADH:ubiquinone oxidoreductase 21kD subunit [Neurospora crassa OR74A] Length = 218 Score = 73.6 bits (180), Expect = 9e-12, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 28/62 (45%) Query: 10 PYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKELSYQRNFS 69 + L+G+ SS D +Q L F + E A ++A G +Y V + +Y NF Sbjct: 147 RWENELMGWQSSGDFVQGTHLTFRTKEEAIQFAEKQGYEYFVQEPNQRHFTPKAYANNFL 206 Query: 70 YD 71 Y Sbjct: 207 YS 208 >gi|577597|emb|CAA54989.1| NADH:ubiquinone oxidoreductase (complex I) [Neurospora crassa] Length = 207 Score = 73.6 bits (180), Expect = 9e-12, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 28/62 (45%) Query: 10 PYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKELSYQRNFS 69 + L+G+ SS D +Q L F + E A ++A G +Y V + +Y NF Sbjct: 136 RWENELMGWQSSGDFVQGTHLTFRTKEEAIQFAEKQGYEYFVQEPNQRHFTPKAYANNFL 195 Query: 70 YD 71 Y Sbjct: 196 YS 197 >gi|238581328|ref|XP_002389573.1| hypothetical protein MPER_11281 [Moniliophthora perniciosa FA553] gi|215451988|gb|EEB90503.1| hypothetical protein MPER_11281 [Moniliophthora perniciosa FA553] Length = 156 Score = 73.6 bits (180), Expect = 9e-12, Method: Composition-based stats. Identities = 21/62 (33%), Positives = 29/62 (46%) Query: 10 PYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKELSYQRNFS 69 + PL+G+ SS D +Q +L F S E A +A G Y V P E +Y N+ Sbjct: 85 RWENPLMGWASSADYMQGTRLSFRSKEDAMHFAEKQGWDYYVQPESVERIPPKNYSENYL 144 Query: 70 YD 71 Y Sbjct: 145 YR 146 >gi|316977432|gb|EFV60534.1| putative NADH-ubiquinone [Trichinella spiralis] Length = 190 Score = 73.2 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 18/73 (24%), Positives = 33/73 (45%), Gaps = 3/73 (4%) Query: 3 EFEKITPPYIEPLLGYTSSKDTLQQVKL--FFPSLEAAEKYASDHGIQYCVIPSCKESQK 60 EF+ + +G+ S+ D L + + F + + A + +G +Y V K K Sbjct: 113 EFDTRD-RWESRFIGWCSNSDPLSNISMAMEFATSDDAVAFCIKNGWEYDVFQPQKIGMK 171 Query: 61 ELSYQRNFSYDRL 73 SY NFS+++ Sbjct: 172 PKSYAENFSWNKR 184 >gi|189206477|ref|XP_001939573.1| NAD(P)H-quinone oxidoreductase subunit I [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187975666|gb|EDU42292.1| NAD(P)H-quinone oxidoreductase subunit I [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 313 Score = 72.4 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 27/63 (42%) Query: 6 KITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKELSYQ 65 + PL+G+ SS D + ++ F S E A +A+ G +Y V K +Y Sbjct: 149 PKGHRWENPLMGWQSSADFMNGHRIQFKSKEDAINFANKQGYEYFVQEPNKRKFVPKAYA 208 Query: 66 RNF 68 F Sbjct: 209 NLF 211 >gi|225467057|ref|XP_002273610.1| PREDICTED: hypothetical protein [Vitis vinifera] gi|297745717|emb|CBI41092.3| unnamed protein product [Vitis vinifera] Length = 66 Score = 71.7 bits (175), Expect = 3e-11, Method: Composition-based stats. Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 3/58 (5%) Query: 16 LGYTSSKDTLQQVK---LFFPSLEAAEKYASDHGIQYCVIPSCKESQKELSYQRNFSY 70 +G+TS+ D V L F S EAA+ +A HG +Y V K +Y NF + Sbjct: 1 MGWTSTGDPYANVGDAGLGFDSEEAAKAFAEKHGWEYTVKKRQTPLLKTKAYADNFKW 58 >gi|166240558|ref|XP_001732977.1| ETC complex I subunit conserved family protein [Dictyostelium discoideum AX4] gi|74866244|sp|Q8T1V6|NDUS4_DICDI RecName: Full=NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial; Flags: Precursor gi|165988658|gb|EDR41095.1| ETC complex I subunit conserved family protein [Dictyostelium discoideum AX4] Length = 190 Score = 71.7 bits (175), Expect = 3e-11, Method: Composition-based stats. Identities = 20/66 (30%), Positives = 32/66 (48%) Query: 6 KITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKELSYQ 65 P + + L+G+ +SKDTL Q+ L F S A Y + G+ Y ++ +K+ Y Sbjct: 111 PFNPKWNDRLMGWWASKDTLNQLNLRFNSETDAVAYCKEIGLNYNIVEEDVTLRKKKKYG 170 Query: 66 RNFSYD 71 F Y Sbjct: 171 HRFRYR 176 >gi|168033906|ref|XP_001769455.1| predicted protein [Physcomitrella patens subsp. patens] gi|162679375|gb|EDQ65824.1| predicted protein [Physcomitrella patens subsp. patens] Length = 110 Score = 71.7 bits (175), Expect = 3e-11, Method: Composition-based stats. Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 5/64 (7%) Query: 10 PYIEPLLGYTSSKDTLQQV---KLFFPSLEAAEKYASDHGIQYCVIPSCKESQKELSYQR 66 + PL+G+TS+ D V L F S E A ++A +G QY V + +Y Sbjct: 46 KWENPLMGWTSTGDPYHSVGEASLNFDSKERAVEFAEKYGWQYTVRATY--HLPPKAYAD 103 Query: 67 NFSY 70 NF + Sbjct: 104 NFKW 107 >gi|297493940|gb|ADI40692.1| NADH dehydrogenase Fe-S protein 4, 18kDa [Cynopterus sphinx] Length = 112 Score = 71.3 bits (174), Expect = 4e-11, Method: Composition-based stats. Identities = 16/56 (28%), Positives = 26/56 (46%), Gaps = 1/56 (1%) Query: 2 LEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKE 57 +EF+ + PL+G+ S+ D L + L F + E A +A +G Y V Sbjct: 58 MEFDTRE-RWENPLMGWASTADPLSNLVLTFSTKEDAVAFAEKNGWSYDVEERKVP 112 >gi|169611702|ref|XP_001799269.1| hypothetical protein SNOG_08966 [Phaeosphaeria nodorum SN15] gi|160702352|gb|EAT84134.2| hypothetical protein SNOG_08966 [Phaeosphaeria nodorum SN15] Length = 241 Score = 71.3 bits (174), Expect = 4e-11, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 28/63 (44%) Query: 6 KITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKELSYQ 65 + PL+G+ SS D + ++ F + E A K+A+ G +Y V K +Y Sbjct: 166 PKGHRWENPLMGWASSADFMNGHRIQFKTKEDAIKFANKQGYEYFVQEPNKRKFVPKAYA 225 Query: 66 RNF 68 F Sbjct: 226 NLF 228 >gi|255730361|ref|XP_002550105.1| hypothetical protein CTRG_04402 [Candida tropicalis MYA-3404] gi|240132062|gb|EER31620.1| hypothetical protein CTRG_04402 [Candida tropicalis MYA-3404] Length = 157 Score = 71.3 bits (174), Expect = 4e-11, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 28/59 (47%) Query: 10 PYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKELSYQRNF 68 + L+GY S D +Q + F + EAA ++A + G + V K ++ Y NF Sbjct: 86 RWENDLMGYQGSADYMQGTIMKFDTKEAAIRFAENQGWDHYVQEPKKRHFRKKDYSANF 144 >gi|330917768|ref|XP_003297952.1| hypothetical protein PTT_08515 [Pyrenophora teres f. teres 0-1] gi|311329108|gb|EFQ93951.1| hypothetical protein PTT_08515 [Pyrenophora teres f. teres 0-1] Length = 224 Score = 70.9 bits (173), Expect = 5e-11, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 27/63 (42%) Query: 6 KITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKELSYQ 65 + PL+G+ SS D + ++ F S E A +A+ G +Y V K +Y Sbjct: 149 PKGHRWENPLMGWQSSADFMNGHRIQFKSKEDAISFANKQGYEYFVQEPNKRKFAPKAYA 208 Query: 66 RNF 68 F Sbjct: 209 NLF 211 >gi|68474993|ref|XP_718382.1| potential mitochondrial Complex I, 21_18kd subunit [Candida albicans SC5314] gi|68475530|ref|XP_718113.1| potential mitochondrial Complex I, 21_18kd subunit [Candida albicans SC5314] gi|46439869|gb|EAK99181.1| potential mitochondrial Complex I, 21_18kd subunit [Candida albicans SC5314] gi|46440147|gb|EAK99456.1| potential mitochondrial Complex I, 21_18kd subunit [Candida albicans SC5314] gi|238879402|gb|EEQ43040.1| conserved hypothetical protein [Candida albicans WO-1] Length = 156 Score = 70.9 bits (173), Expect = 5e-11, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 28/59 (47%) Query: 10 PYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKELSYQRNF 68 + L+GY S D +Q + F + E+A K+A + G + V K ++ Y NF Sbjct: 85 RWENDLMGYQGSADYMQGTIMKFDTKESAIKFAENQGWDHYVQEPKKRHFRKKDYSANF 143 >gi|241948101|ref|XP_002416773.1| adh-ubiquinone oxidoreductase [21 kda] subunit, mitochondrial precursor, putative [Candida dubliniensis CD36] gi|223640111|emb|CAX44357.1| adh-ubiquinone oxidoreductase [21 kda] subunit, mitochondrial precursor, putative [Candida dubliniensis CD36] Length = 156 Score = 70.9 bits (173), Expect = 5e-11, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 28/59 (47%) Query: 10 PYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKELSYQRNF 68 + L+GY S D +Q + F + EAA K+A + G + V K ++ Y NF Sbjct: 85 RWENDLMGYQGSADYMQGTIMKFDTKEAAIKFAENQGWDHYVQEPKKRHFRKKDYSANF 143 >gi|298709841|emb|CBJ26181.1| NADH dehydrogenase (ubiquinone) [Ectocarpus siliculosus] Length = 241 Score = 70.9 bits (173), Expect = 6e-11, Method: Composition-based stats. Identities = 20/69 (28%), Positives = 33/69 (47%), Gaps = 3/69 (4%) Query: 2 LEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKE 61 L F++ + PL+G+TS+ D + ++L F + E A K+ G +Y V K Sbjct: 124 LTFKQKE-RWSNPLMGWTSTGDPMSNMQLSFSTPEQAVKFCQKRGWKYEVKAPAKREAVF 182 Query: 62 L--SYQRNF 68 +Y NF Sbjct: 183 GKFAYSHNF 191 >gi|126138540|ref|XP_001385793.1| NADH-ubiquinone oxidoreductase 21 kDa subunit, mitochondrial precursor (Complex I-21KD) (CI-21KD) [Scheffersomyces stipitis CBS 6054] gi|126093071|gb|ABN67764.1| NADH-ubiquinone oxidoreductase 21 kDa subunit, mitochondrial precursor (Complex I-21KD) (CI-21KD) [Scheffersomyces stipitis CBS 6054] Length = 118 Score = 70.9 bits (173), Expect = 6e-11, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 26/59 (44%) Query: 10 PYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKELSYQRNF 68 + L+GY S D +Q + F + EAA K+A G + V ++ Y NF Sbjct: 47 RWENDLMGYQGSGDYMQGTIMKFDTKEAAIKFAEGQGWDHYVQEPKTRHFRKKDYSANF 105 >gi|312213727|emb|CBX93729.1| similar to NADH-ubiquinone oxidoreductase 21 kDa subunit [Leptosphaeria maculans] Length = 221 Score = 70.1 bits (171), Expect = 9e-11, Method: Composition-based stats. Identities = 15/65 (23%), Positives = 29/65 (44%) Query: 6 KITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKELSYQ 65 + L+G+ SS D + ++ F + E A +A+ G +Y V + + +Y Sbjct: 146 PKGHRWENQLMGWQSSADFMNGHRIQFKTKEDAINFANKQGYEYFVQEPNERKFRPKAYA 205 Query: 66 RNFSY 70 F+Y Sbjct: 206 NLFTY 210 >gi|313212579|emb|CBY36536.1| unnamed protein product [Oikopleura dioica] gi|313212975|emb|CBY36869.1| unnamed protein product [Oikopleura dioica] gi|313225119|emb|CBY20912.1| unnamed protein product [Oikopleura dioica] Length = 187 Score = 70.1 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 18/74 (24%), Positives = 34/74 (45%), Gaps = 4/74 (5%) Query: 3 EFEKITPPYIEPLLGYTSSKDTLQQVK--LFFPSLEAAEKYASDHGIQY-CVIPSCKESQ 59 EF+ + P +G+ S+ D L + F + EAA +A G + V+ K+ Sbjct: 109 EFD-TQERWENPTMGWGSTADPLSNTHGWMHFKTKEAAIDFAHRQGWEIDQVVEPRKKIL 167 Query: 60 KELSYQRNFSYDRL 73 + Y NF++++ Sbjct: 168 EFREYGDNFAWNKR 181 >gi|58261792|ref|XP_568306.1| hypothetical protein CNM01810 [Cryptococcus neoformans var. neoformans JEC21] gi|134118475|ref|XP_772124.1| hypothetical protein CNBM1690 [Cryptococcus neoformans var. neoformans B-3501A] gi|50254731|gb|EAL17477.1| hypothetical protein CNBM1690 [Cryptococcus neoformans var. neoformans B-3501A] gi|57230479|gb|AAW46789.1| conserved hypothetical protein [Cryptococcus neoformans var. neoformans JEC21] Length = 179 Score = 69.7 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 20/70 (28%), Positives = 31/70 (44%), Gaps = 2/70 (2%) Query: 1 MLEFE--KITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKES 58 +++F+ + + L+G+ SS D +Q L F S E A +A G Y V K Sbjct: 97 IIDFDVLQGAGRWENRLMGWASSADYVQGTTLAFRSKEDAIYFAEKQGWPYKVDEPKKIE 156 Query: 59 QKELSYQRNF 68 SY N+ Sbjct: 157 IPPKSYANNY 166 >gi|146421999|ref|XP_001486942.1| hypothetical protein PGUG_00320 [Meyerozyma guilliermondii ATCC 6260] Length = 197 Score = 69.0 bits (168), Expect = 2e-10, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 29/59 (49%) Query: 10 PYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKELSYQRNF 68 + + L+GY SS D +Q +L F + E+A K+A G + V + + Y NF Sbjct: 126 RWEDHLIGYQSSGDYMQGTQLKFDTKESAIKFAQSQGWDHYVQEPNVKHFRRKDYSANF 184 >gi|190344533|gb|EDK36221.2| hypothetical protein PGUG_00320 [Meyerozyma guilliermondii ATCC 6260] Length = 197 Score = 68.6 bits (167), Expect = 3e-10, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 29/59 (49%) Query: 10 PYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKELSYQRNF 68 + + L+GY SS D +Q +L F + E+A K+A G + V + + Y NF Sbjct: 126 RWEDHLIGYQSSGDYMQGTQLKFDTKESAIKFAQSQGWDHYVQEPNVKHFRRKDYSANF 184 >gi|50546867|ref|XP_500903.1| YALI0B14861p [Yarrowia lipolytica] gi|49646769|emb|CAG83154.1| YALI0B14861p [Yarrowia lipolytica] Length = 161 Score = 68.6 bits (167), Expect = 3e-10, Method: Composition-based stats. Identities = 16/59 (27%), Positives = 28/59 (47%) Query: 10 PYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKELSYQRNF 68 + L+G+ SS D +Q ++ F S E+A K+A+ G + + + Y NF Sbjct: 90 RWENDLIGWQSSGDYMQATQMKFTSKESAIKFANKQGWDFYIQEPHHRKFRVKQYANNF 148 >gi|254569418|ref|XP_002491819.1| hypothetical protein [Pichia pastoris GS115] gi|238031616|emb|CAY69539.1| Hypothetical protein PAS_chr2-2_0366 [Pichia pastoris GS115] gi|308152296|emb|CBI83551.1| NUYM (18 kDa) subunit of mitochondrial NADH:ubiquinone oxidoreductase (complex I) [Pichia pastoris] gi|328351681|emb|CCA38080.1| NADH dehydrogenase (ubiquinone) Fe-S protein 4 [Pichia pastoris CBS 7435] Length = 159 Score = 68.2 bits (166), Expect = 3e-10, Method: Composition-based stats. Identities = 20/69 (28%), Positives = 28/69 (40%), Gaps = 1/69 (1%) Query: 10 PYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKELSYQRNFS 69 + L+GY SS D +Q L F + E A ++A G Y + + Y NF Sbjct: 88 RWENDLMGYQSSSDYMQGTILKFDTREGAIRFAKGQGWDYYIQEPKVRRFVKKDYSANF- 146 Query: 70 YDRLEPWTH 78 Y P H Sbjct: 147 YHSKGPLKH 155 >gi|149243880|ref|XP_001526540.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL YB-4239] gi|146448934|gb|EDK43190.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL YB-4239] Length = 157 Score = 67.8 bits (165), Expect = 5e-10, Method: Composition-based stats. Identities = 16/59 (27%), Positives = 28/59 (47%) Query: 10 PYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKELSYQRNF 68 + L+GY S D +Q + F + EAA ++A + G + + K ++ Y NF Sbjct: 86 RWENDLIGYQGSSDYMQGTIMKFDTKEAAIRFAENQGWDHYIQEPKKRHFRKKEYSANF 144 >gi|290987475|ref|XP_002676448.1| NADH:ubiquinone oxidoreductase [Naegleria gruberi] gi|284090050|gb|EFC43704.1| NADH:ubiquinone oxidoreductase [Naegleria gruberi] Length = 156 Score = 67.4 bits (164), Expect = 6e-10, Method: Composition-based stats. Identities = 20/66 (30%), Positives = 27/66 (40%), Gaps = 4/66 (6%) Query: 13 EPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK----ELSYQRNF 68 +PL+G+ +S D L +FF S E A Y HG Y + SY F Sbjct: 88 DPLMGWNASNDPLLTTYVFFNSKEDAIDYCKRHGYIYEIEDPEDSKNLEDLGGKSYSDKF 147 Query: 69 SYDRLE 74 Y + E Sbjct: 148 KYRKEE 153 >gi|227818757|ref|YP_002822728.1| NADH-ubiquinone oxidoreductase [Sinorhizobium fredii NGR234] gi|227337756|gb|ACP21975.1| putative NADH-ubiquinone oxidoreductase [Sinorhizobium fredii NGR234] Length = 74 Score = 66.7 bits (162), Expect = 1e-09, Method: Composition-based stats. Identities = 22/42 (52%), Positives = 28/42 (66%) Query: 1 MLEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYA 42 +L FE+ PP I+ L+GYT DTL QV+L FPS + A YA Sbjct: 25 LLVFERRVPPTIDHLIGYTGGSDTLTQVELRFPSRDTAVAYA 66 >gi|221219832|gb|ACM08577.1| NADH dehydrogenase iron-sulfur protein 4, mitochondrial precursor [Salmo salar] Length = 70 Score = 66.7 bits (162), Expect = 1e-09, Method: Composition-based stats. Identities = 14/52 (26%), Positives = 25/52 (48%) Query: 22 KDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKELSYQRNFSYDRL 73 D + + L F S + A +A +G Y + ++ + SY NFS+D+ Sbjct: 13 GDPMSNMNLTFTSKDDAVAFAEKNGWSYDITEKMEKKPRAKSYGANFSWDKR 64 >gi|328865255|gb|EGG13641.1| ETC complex I subunit conserved family protein [Dictyostelium fasciculatum] Length = 179 Score = 66.3 bits (161), Expect = 1e-09, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 34/65 (52%) Query: 6 KITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKELSYQ 65 + + + L+G+ +S TL Q+ L FP+ E+A Y ++G+ Y ++ + K+ Y Sbjct: 101 PVNNKWHDGLMGWWASAGTLNQINLTFPAEESAIAYCKENGLNYEILDEDHTTMKKKRYG 160 Query: 66 RNFSY 70 F Y Sbjct: 161 YRFIY 165 >gi|50425319|ref|XP_461253.1| DEHA2F20812p [Debaryomyces hansenii CBS767] gi|49656922|emb|CAG89642.1| DEHA2F20812p [Debaryomyces hansenii] Length = 158 Score = 65.9 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 29/59 (49%) Query: 10 PYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKELSYQRNF 68 + L+GY SS D +Q + F + EAA ++A G + V K+ ++ Y NF Sbjct: 87 RWENDLIGYQSSADYMQGTNMHFDTKEAAIRFAQGQGWDHYVQEPKKKHFRKKDYSTNF 145 >gi|330799992|ref|XP_003288024.1| hypothetical protein DICPUDRAFT_55192 [Dictyostelium purpureum] gi|325081983|gb|EGC35481.1| hypothetical protein DICPUDRAFT_55192 [Dictyostelium purpureum] Length = 166 Score = 65.9 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 19/66 (28%), Positives = 33/66 (50%) Query: 6 KITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKELSYQ 65 + + L+G+ SSKD+L Q+ L F S A Y + G+ Y ++ ++ +K+ Y Sbjct: 87 PFADKWNDRLMGWCSSKDSLNQLNLKFSSEADAVAYCKEIGLDYTIVGGEEQIKKKKKYG 146 Query: 66 RNFSYD 71 F Y Sbjct: 147 YRFRYR 152 >gi|323449573|gb|EGB05460.1| hypothetical protein AURANDRAFT_16160 [Aureococcus anophagefferens] Length = 100 Score = 65.1 bits (158), Expect = 3e-09, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 3/61 (4%) Query: 7 ITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKELSYQR 66 + PL+G+TS+ D L +L F + EAAE++A+ HG Y + ++ Y Sbjct: 43 TEARWSNPLMGWTSTADPLGNAELKFETAEAAERFAAKHGWAY---ETSVPIARDKRYGT 99 Query: 67 N 67 N Sbjct: 100 N 100 >gi|321265209|ref|XP_003197321.1| hypothetical protein CGB_M2440C [Cryptococcus gattii WM276] gi|317463800|gb|ADV25534.1| Conserved hypothetical protein [Cryptococcus gattii WM276] Length = 179 Score = 65.1 bits (158), Expect = 3e-09, Method: Composition-based stats. Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 2/70 (2%) Query: 1 MLEFE--KITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKES 58 M++F+ + + L+G+ SS D +Q L F S E A +A G Y V K Sbjct: 97 MIDFDVLQGAGRWDNRLIGWASSADYVQGTTLAFRSKEDAIYFAEKQGWPYKVDEPKKIE 156 Query: 59 QKELSYQRNF 68 SY N+ Sbjct: 157 IPPKSYANNY 166 >gi|301100676|ref|XP_002899427.1| NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, putative [Phytophthora infestans T30-4] gi|262103735|gb|EEY61787.1| NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, putative [Phytophthora infestans T30-4] Length = 242 Score = 63.6 bits (154), Expect = 8e-09, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 30/65 (46%), Gaps = 3/65 (4%) Query: 7 ITPPYIE-PLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK--ELS 63 +P E PL+G+TS+ D + F + E AE++A G + + ++S Sbjct: 127 SSPRTWENPLMGWTSTADPYIGLVTKFDTKEEAERFAKKQGWELEITEPAPVGDYYGKIS 186 Query: 64 YQRNF 68 Y NF Sbjct: 187 YSHNF 191 >gi|260944798|ref|XP_002616697.1| hypothetical protein CLUG_03938 [Clavispora lusitaniae ATCC 42720] gi|238850346|gb|EEQ39810.1| hypothetical protein CLUG_03938 [Clavispora lusitaniae ATCC 42720] Length = 154 Score = 63.6 bits (154), Expect = 9e-09, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 28/59 (47%) Query: 10 PYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKELSYQRNF 68 + L+GY SS D +Q + F + EAA ++A G Y V + ++ Y NF Sbjct: 83 RWENDLIGYQSSGDYMQGTIMKFDNKEAAIRFAEGQGWSYYVKEPNQRHFRKKEYAMNF 141 >gi|53133508|emb|CAG32083.1| hypothetical protein RCJMB04_17f18 [Gallus gallus] Length = 186 Score = 63.6 bits (154), Expect = 9e-09, Method: Composition-based stats. Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 1/49 (2%) Query: 2 LEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYC 50 +EF+ + PL+G+ S+ D L + L F + E A +A +G Y Sbjct: 89 MEFDNRE-RWENPLMGWASTADPLSNMVLTFSTKEDAIAFAEKNGAYYT 136 >gi|281202882|gb|EFA77084.1| ETC complex I subunit conserved family protein [Polysphondylium pallidum PN500] Length = 193 Score = 63.2 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 32/65 (49%) Query: 6 KITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKELSYQ 65 I + + L+G+ +S TL QV+L F S A Y ++G+ Y V+ + K+ Y Sbjct: 114 PIVDKWHDGLMGWWASAGTLGQVQLAFDSEAGAISYCKENGLNYEVLQEDVVTTKKKRYG 173 Query: 66 RNFSY 70 F Y Sbjct: 174 YRFLY 178 >gi|229593554|ref|XP_001028104.3| hypothetical protein TTHERM_00526930 [Tetrahymena thermophila] gi|225567464|gb|EAS07862.3| hypothetical protein TTHERM_00526930 [Tetrahymena thermophila SB210] Length = 185 Score = 62.8 bits (152), Expect = 1e-08, Method: Composition-based stats. Identities = 20/69 (28%), Positives = 29/69 (42%), Gaps = 1/69 (1%) Query: 2 LEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKE 61 LEFE+ Y P +G++ + DT + +F +LE A Y G Y V Sbjct: 107 LEFER-QAQYKTPWMGWSFNGDTFSKRNHYFCTLEDAISYCKQMGFGYEVSFPRSRYHTR 165 Query: 62 LSYQRNFSY 70 SY N + Sbjct: 166 KSYADNMLW 174 >gi|320580865|gb|EFW95087.1| mitochondrial Complex I subunit, putative [Pichia angusta DL-1] Length = 153 Score = 62.0 bits (150), Expect = 2e-08, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 30/63 (47%) Query: 6 KITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKELSYQ 65 + L+GY SS D +Q +L F + E+A +A++ G Y + K K+ Y Sbjct: 78 PRGNRWENDLIGYQSSSDYMQGTRLSFETKESAISFANNQGWDYFIQEPKKRKFKKKEYA 137 Query: 66 RNF 68 NF Sbjct: 138 ANF 140 >gi|103485906|ref|YP_615467.1| hypothetical protein Sala_0412 [Sphingopyxis alaskensis RB2256] gi|98975983|gb|ABF52134.1| hypothetical protein Sala_0412 [Sphingopyxis alaskensis RB2256] Length = 180 Score = 60.9 bits (147), Expect = 6e-08, Method: Composition-based stats. Identities = 15/51 (29%), Positives = 27/51 (52%) Query: 2 LEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVI 52 LEFE P + G+ ++ D + +++ FP ++A +A G +Y VI Sbjct: 48 LEFEARRPLGRDVFTGWITNDDPYRHIRVQFPDRDSAIAFAERQGWEYRVI 98 >gi|148284585|ref|YP_001248675.1| hypothetical protein OTBS_1045 [Orientia tsutsugamushi str. Boryong] gi|189183746|ref|YP_001937531.1| hypothetical protein OTT_0839 [Orientia tsutsugamushi str. Ikeda] gi|146740024|emb|CAM80111.1| hypothetical protein OTBS_1045 [Orientia tsutsugamushi str. Boryong] gi|189180517|dbj|BAG40297.1| hypothetical protein OTT_0839 [Orientia tsutsugamushi str. Ikeda] Length = 93 Score = 59.3 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 15/65 (23%), Positives = 31/65 (47%) Query: 5 EKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKELSY 64 E+ +I+ LG+T + + K++F + +A K+ ++ + Y +I + SY Sbjct: 29 EEKKNRFIDTTLGWTGTTNPYASTKIYFKNKLSAIKFCLNNYLNYELITPKRRKLIVKSY 88 Query: 65 QRNFS 69 NF Sbjct: 89 TENFK 93 >gi|302837097|ref|XP_002950108.1| hypothetical protein VOLCADRAFT_90608 [Volvox carteri f. nagariensis] gi|300264581|gb|EFJ48776.1| hypothetical protein VOLCADRAFT_90608 [Volvox carteri f. nagariensis] Length = 289 Score = 58.2 bits (140), Expect = 4e-07, Method: Composition-based stats. Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 2/64 (3%) Query: 2 LEFEKITPPYIEPLLGYTSSKDTLQQ--VKLFFPSLEAAEKYASDHGIQYCVIPSCKESQ 59 LEF +T + L+G+TSS DT Q V L F + E A + + G QY + + + Sbjct: 201 LEFLDVTDKWENRLIGWTSSPDTKHQAAVALQFYTAEEAIAFCNRQGWQYEMRTRDEAAV 260 Query: 60 KELS 63 + Sbjct: 261 RGGG 264 >gi|103487556|ref|YP_617117.1| hypothetical protein Sala_2075 [Sphingopyxis alaskensis RB2256] gi|98977633|gb|ABF53784.1| hypothetical protein Sala_2075 [Sphingopyxis alaskensis RB2256] Length = 162 Score = 57.8 bits (139), Expect = 5e-07, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 22/47 (46%) Query: 4 FEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYC 50 F P I+PL G++ D L V+L F S +AE GI + Sbjct: 49 FVPRWGPSIDPLTGWSGGGDPLASVELRFASRTSAEACCRRMGIPFE 95 >gi|218512993|ref|ZP_03509833.1| probable NADH-ubiquinone oxidoreductase protein [Rhizobium etli 8C-3] Length = 35 Score = 57.4 bits (138), Expect = 6e-07, Method: Composition-based stats. Identities = 14/35 (40%), Positives = 23/35 (65%) Query: 44 DHGIQYCVIPSCKESQKELSYQRNFSYDRLEPWTH 78 +GI+Y VI + +++ ++Y NF Y R +PWTH Sbjct: 1 RNGIEYRVIAPKEPARQVVAYPDNFRYTRTQPWTH 35 >gi|74267671|gb|AAI02293.1| NDUFS4 protein [Bos taurus] Length = 147 Score = 56.6 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 13/42 (30%), Positives = 22/42 (52%), Gaps = 1/42 (2%) Query: 2 LEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYAS 43 +EF+ + PL+G+ S+ D L + L F + E A +A Sbjct: 99 MEFDTRE-RWENPLMGWASTADPLSNLVLTFSTKEDAVAFAE 139 >gi|219126120|ref|XP_002183312.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217405068|gb|EEC45012.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 314 Score = 52.4 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 26/62 (41%), Gaps = 3/62 (4%) Query: 10 PYIEPLLGYTSSKDTLQQV-KLFFPSLEAAEKYASDHGIQYCVIPSCKESQKELS--YQR 66 + L+G+TS+ D Q L FP+ A +A G + V +E YQ Sbjct: 190 KWTNSLMGWTSNGDPYQSAPPLIFPNAADAVYFAKKRGWNFVVKQPIMRDPREDGAQYQD 249 Query: 67 NF 68 NF Sbjct: 250 NF 251 >gi|296413203|ref|XP_002836304.1| hypothetical protein [Tuber melanosporum Mel28] gi|295630120|emb|CAZ80495.1| unnamed protein product [Tuber melanosporum] Length = 120 Score = 52.4 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 13/40 (32%), Positives = 23/40 (57%) Query: 10 PYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQY 49 + PL+G+ SS D++Q +FF S + A +A G ++ Sbjct: 79 RWENPLMGWQSSGDSMQGTHIFFKSRKDAVAFAEKQGYKW 118 >gi|224003841|ref|XP_002291592.1| predicted protein [Thalassiosira pseudonana CCMP1335] gi|220973368|gb|EED91699.1| predicted protein [Thalassiosira pseudonana CCMP1335] Length = 278 Score = 52.0 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 15/61 (24%), Positives = 29/61 (47%), Gaps = 5/61 (8%) Query: 13 EPLLGYTSSKDTLQQ---VKLFFPSLEAAEKYASDHGIQYCVIPSCKESQK--ELSYQRN 67 PL+G+ SS D + +++ F + E A+ +A G ++ + P + + YQ Sbjct: 155 NPLMGWVSSADPMANNMRLQMSFDTAEDAKYFAEKRGWKFLIEPPIIRKGRDDDAQYQDV 214 Query: 68 F 68 F Sbjct: 215 F 215 >gi|168024538|ref|XP_001764793.1| predicted protein [Physcomitrella patens subsp. patens] gi|162684087|gb|EDQ70492.1| predicted protein [Physcomitrella patens subsp. patens] Length = 289 Score = 51.6 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 20/73 (27%), Positives = 31/73 (42%), Gaps = 6/73 (8%) Query: 3 EFEKITPPYIEPLLGYTSSKDTLQQVK---LFFPSLEAAEKYASDHGIQYCVIP--SCKE 57 ++E + L G+TS+ D+ V L F S EAA +A +G Y + + Sbjct: 215 DYE-TETKWESSLKGWTSTGDSYLDVDESGLQFDSKEAAITFAEQYGWSYKIYEFQVKEA 273 Query: 58 SQKELSYQRNFSY 70 K S NF + Sbjct: 274 KHKRNSSLGNFDW 286 >gi|145522057|ref|XP_001446878.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124414367|emb|CAK79481.1| unnamed protein product [Paramecium tetraurelia] Length = 186 Score = 50.5 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 17/57 (29%), Positives = 24/57 (42%) Query: 14 PLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQKELSYQRNFSY 70 P G+T SKD + F SLEAA ++ G Y + + Y NF + Sbjct: 120 PWSGWTFSKDQKSREVYKFLSLEAALEFCQQDGYGYIIQYPHFRYTSKRKYADNFKW 176 >gi|74140664|dbj|BAB32133.3| unnamed protein product [Mus musculus] Length = 133 Score = 49.3 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 13/41 (31%), Positives = 22/41 (53%), Gaps = 1/41 (2%) Query: 2 LEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYA 42 +EF+ + PL+G+ S+ D L + L F + E A +A Sbjct: 94 MEFDTRE-RWENPLVGWASTADPLSNMVLTFSAKEDAIAFA 133 >gi|325194412|emb|CCA28276.1| NADH dehydrogenase putative [Albugo laibachii Nc14] Length = 172 Score = 49.3 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 11/35 (31%), Positives = 17/35 (48%) Query: 11 YIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDH 45 + PL+ +TS+ D V L F + E A +A Sbjct: 130 WENPLMKWTSTDDPFHSVVLKFDTKEEAMMFARKQ 164 >gi|297493942|gb|ADI40693.1| NADH dehydrogenase Fe-S protein 4, 18kDa [Rousettus leschenaultii] Length = 80 Score = 45.9 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 11/35 (31%), Positives = 19/35 (54%), Gaps = 1/35 (2%) Query: 2 LEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLE 36 +EF+ + PL+G+ S+ D L + L F + E Sbjct: 47 MEFDTRE-RWENPLMGWASTADPLSNLVLTFSTKE 80 >gi|238923659|ref|YP_002937175.1| hypothetical protein EUBREC_1281 [Eubacterium rectale ATCC 33656] gi|238875334|gb|ACR75041.1| Hypothetical protein EUBREC_1281 [Eubacterium rectale ATCC 33656] Length = 93 Score = 42.8 bits (100), Expect = 0.015, Method: Composition-based stats. Identities = 11/43 (25%), Positives = 19/43 (44%), Gaps = 7/43 (16%) Query: 15 LLGYTSSKD-------TLQQVKLFFPSLEAAEKYASDHGIQYC 50 L+ + + T V+L F + + A KYA +G +Y Sbjct: 49 LMNWDEDGNYHKKPIKTQDDVRLSFKTRDEAVKYAKKNGYKYI 91 >gi|225468324|ref|XP_002270108.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 143 Score = 42.4 bits (99), Expect = 0.020, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 25/67 (37%), Gaps = 14/67 (20%) Query: 7 ITPPYIEPLLGYTSSKDTLQQVK---LFFPSLEAAEKYASDHGIQYCVIPSCKESQKELS 63 T + PL+G+TS+ D V L F S E A G+ + + Sbjct: 80 STQKWENPLMGWTSTGDPYANVGDAGLGFDS-EEALFKCVT-GL---------FLLQTKA 128 Query: 64 YQRNFSY 70 Y NF + Sbjct: 129 YADNFKW 135 >gi|242023416|ref|XP_002432130.1| ankyrin 2,3/unc44, putative [Pediculus humanus corporis] gi|212517504|gb|EEB19392.1| ankyrin 2,3/unc44, putative [Pediculus humanus corporis] Length = 1405 Score = 40.5 bits (94), Expect = 0.079, Method: Composition-based stats. Identities = 12/50 (24%), Positives = 25/50 (50%) Query: 10 PYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKESQ 59 + P +G+TSS D+L +++ F +LE A ++ + Y + + Sbjct: 784 KWENPTMGWTSSSDSLSTLEIHFDTLEGAIEFCRKNEYDYQFFLNKAKKV 833 >gi|319790339|ref|YP_004151972.1| argininosuccinate synthase [Thermovibrio ammonificans HB-1] gi|317114841|gb|ADU97331.1| argininosuccinate synthase [Thermovibrio ammonificans HB-1] Length = 402 Score = 37.4 bits (86), Expect = 0.61, Method: Composition-based stats. Identities = 14/37 (37%), Positives = 18/37 (48%), Gaps = 5/37 (13%) Query: 31 FFPSLEAAEKYASDHGIQYCVIPSCKESQKELSYQRN 67 F S E +YA HGI V+ + + K SY RN Sbjct: 147 EFKSREEEIEYAKKHGIP--VVATKE---KPYSYDRN 178 >gi|289617685|emb|CBI61408.1| unnamed protein product [Sordaria macrospora] Length = 1325 Score = 37.4 bits (86), Expect = 0.67, Method: Composition-based stats. Identities = 7/35 (20%), Positives = 13/35 (37%) Query: 30 LFFPSLEAAEKYASDHGIQYCVIPSCKESQKELSY 64 L F + E A +A +H ++ + Y Sbjct: 586 LRFDTPEEAVAFAEEHNFEFTTWVPPGKPAVPEPY 620 >gi|257413763|ref|ZP_04744156.2| keratin, type I cytoskeletal 10 [Roseburia intestinalis L1-82] gi|257202372|gb|EEV00657.1| keratin, type I cytoskeletal 10 [Roseburia intestinalis L1-82] Length = 88 Score = 37.4 bits (86), Expect = 0.71, Method: Composition-based stats. Identities = 10/25 (40%), Positives = 14/25 (56%) Query: 25 LQQVKLFFPSLEAAEKYASDHGIQY 49 + V+ F S E A KYA +G +Y Sbjct: 61 KENVRSSFKSREEAVKYAKKNGYKY 85 >gi|121534679|ref|ZP_01666500.1| Argininosuccinate synthase [Thermosinus carboxydivorans Nor1] gi|121306699|gb|EAX47620.1| Argininosuccinate synthase [Thermosinus carboxydivorans Nor1] Length = 405 Score = 37.0 bits (85), Expect = 0.88, Method: Composition-based stats. Identities = 9/23 (39%), Positives = 9/23 (39%) Query: 34 SLEAAEKYASDHGIQYCVIPSCK 56 S E A YA HGI V Sbjct: 153 SREDAIDYAEKHGIPVPVTKKRP 175 >gi|225848405|ref|YP_002728568.1| argininosuccinate synthase [Sulfurihydrogenibium azorense Az-Fu1] gi|225643412|gb|ACN98462.1| argininosuccinate synthase [Sulfurihydrogenibium azorense Az-Fu1] Length = 399 Score = 37.0 bits (85), Expect = 0.95, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 19/53 (35%), Gaps = 11/53 (20%) Query: 31 FFPSLEAAEKYASDHGIQYCVIPSCKESQKELSYQRNF------SYDRLEPWT 77 F S E YA HGI +K SY RN + +PWT Sbjct: 147 EFKSREEEIDYAMKHGIPV-----KATKEKPYSYDRNLWGVAIEAGPLEDPWT 194 >gi|308800022|ref|XP_003074792.1| unnamed protein product [Ostreococcus tauri] gi|116061332|emb|CAL52050.1| unnamed protein product [Ostreococcus tauri] Length = 106 Score = 36.6 bits (84), Expect = 1.1, Method: Composition-based stats. Identities = 17/82 (20%), Positives = 28/82 (34%), Gaps = 21/82 (25%) Query: 9 PPYIEPLLGYT--SSKDTLQQVKLFFPSLEAAEKYASDHG-IQYCVIPSCKESQ------ 59 P + L G+T S D L Q + + HG I++ + +++ Sbjct: 25 PTWTNALQGWTSTGSADRLNQ-----TGRNTSPADSIRHGNIEFVCVSPLRKAHFHNSIL 79 Query: 60 -------KELSYQRNFSYDRLE 74 + SY NFS R Sbjct: 80 PGVREVHRPKSYGDNFSVSRRG 101 >gi|325295219|ref|YP_004281733.1| Argininosuccinate synthase [Desulfurobacterium thermolithotrophum DSM 11699] gi|325065667|gb|ADY73674.1| Argininosuccinate synthase [Desulfurobacterium thermolithotrophum DSM 11699] Length = 402 Score = 36.6 bits (84), Expect = 1.1, Method: Composition-based stats. Identities = 14/37 (37%), Positives = 18/37 (48%), Gaps = 5/37 (13%) Query: 31 FFPSLEAAEKYASDHGIQYCVIPSCKESQKELSYQRN 67 F S + +YA HGI VI + + K SY RN Sbjct: 147 EFKSRDEEIEYAKKHGIP--VIATKE---KPYSYDRN 178 >gi|300122795|emb|CBK23811.2| unnamed protein product [Blastocystis hominis] Length = 91 Score = 36.2 bits (83), Expect = 1.3, Method: Composition-based stats. Identities = 7/40 (17%), Positives = 14/40 (35%), Gaps = 1/40 (2%) Query: 28 VKLFFPSLEAAEKYASDHGIQYCVIP-SCKESQKELSYQR 66 ++L F E A ++ G ++ V + Y Sbjct: 1 MQLKFEKKEDAIRFCKTQGYKFEVSELPPQIPPVHKQYAD 40 >gi|330927665|ref|XP_003301953.1| hypothetical protein PTT_13604 [Pyrenophora teres f. teres 0-1] gi|311322955|gb|EFQ89955.1| hypothetical protein PTT_13604 [Pyrenophora teres f. teres 0-1] Length = 678 Score = 35.8 bits (82), Expect = 1.7, Method: Composition-based stats. Identities = 18/56 (32%), Positives = 24/56 (42%) Query: 2 LEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKE 57 L F I+ ++ PL+GYT+S + L F A S H I Y VI Sbjct: 111 LTFVVISLVFLSPLVGYTASALLNNTIHLKFGQRGVAIIAPSCHLIAYIVIAVHPP 166 >gi|189189700|ref|XP_001931189.1| conserved hypothetical protein [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187972795|gb|EDU40294.1| conserved hypothetical protein [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 471 Score = 35.8 bits (82), Expect = 1.7, Method: Composition-based stats. Identities = 18/56 (32%), Positives = 24/56 (42%) Query: 2 LEFEKITPPYIEPLLGYTSSKDTLQQVKLFFPSLEAAEKYASDHGIQYCVIPSCKE 57 L F I+ ++ PL+GYT+S + L F A S H I Y VI Sbjct: 111 LTFVVISLVFLSPLVGYTASALLNNTIHLKFGQRGVAIIAPSCHLIAYIVIAVHPP 166 >gi|225851469|ref|YP_002731703.1| argininosuccinate synthase [Persephonella marina EX-H1] gi|225645666|gb|ACO03852.1| argininosuccinate synthase [Persephonella marina EX-H1] Length = 399 Score = 35.8 bits (82), Expect = 1.8, Method: Composition-based stats. Identities = 13/37 (35%), Positives = 15/37 (40%), Gaps = 5/37 (13%) Query: 31 FFPSLEAAEKYASDHGIQYCVIPSCKESQKELSYQRN 67 F S E +YA HGI +K SY RN Sbjct: 147 EFKSREEEIEYALKHGIPV-----KATKEKPYSYDRN 178 >gi|328950890|ref|YP_004368225.1| glycyl-tRNA synthetase, beta subunit [Marinithermus hydrothermalis DSM 14884] gi|328451214|gb|AEB12115.1| glycyl-tRNA synthetase, beta subunit [Marinithermus hydrothermalis DSM 14884] Length = 698 Score = 35.8 bits (82), Expect = 2.0, Method: Composition-based stats. Identities = 12/44 (27%), Positives = 18/44 (40%), Gaps = 2/44 (4%) Query: 22 KDTLQQVKLFFPSLEA--AEKYASDHGIQYCVIPSCKESQKELS 63 D Q+ FP LE A YA G+ V + +E+ + Sbjct: 386 ADLGTQMVYEFPELEGIMARAYAERQGVDPRVARALEEAVRPQG 429 >gi|330997954|ref|ZP_08321788.1| conserved domain protein [Paraprevotella xylaniphila YIT 11841] gi|329569558|gb|EGG51328.1| conserved domain protein [Paraprevotella xylaniphila YIT 11841] Length = 223 Score = 35.5 bits (81), Expect = 2.7, Method: Composition-based stats. Identities = 12/48 (25%), Positives = 20/48 (41%), Gaps = 6/48 (12%) Query: 28 VKLFFPSLEAAEKYASDHGI-QYCVIPSCKESQKELSYQRNFSY-DRL 73 + + F SLE YA H I V + ++ + NF + +R Sbjct: 17 ITIDFDSLEEGLDYAQRHNIKDVLVRSEKNDIKRVV----NFDFLNRR 60 >gi|294778538|ref|ZP_06743961.1| hypothetical protein CUU_0560 [Bacteroides vulgatus PC510] gi|294447800|gb|EFG16377.1| hypothetical protein CUU_0560 [Bacteroides vulgatus PC510] Length = 223 Score = 35.5 bits (81), Expect = 2.7, Method: Composition-based stats. Identities = 12/48 (25%), Positives = 20/48 (41%), Gaps = 6/48 (12%) Query: 28 VKLFFPSLEAAEKYASDHGI-QYCVIPSCKESQKELSYQRNFSY-DRL 73 + + F SLE YA H I V + ++ + NF + +R Sbjct: 17 ITIDFDSLEEGLDYAQRHNIKDVLVRSEKNDIKRVV----NFDFLNRR 60 >gi|188997246|ref|YP_001931497.1| Argininosuccinate synthase [Sulfurihydrogenibium sp. YO3AOP1] gi|188932313|gb|ACD66943.1| Argininosuccinate synthase [Sulfurihydrogenibium sp. YO3AOP1] Length = 399 Score = 35.5 bits (81), Expect = 2.8, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 18/53 (33%), Gaps = 11/53 (20%) Query: 31 FFPSLEAAEKYASDHGIQYCVIPSCKESQKELSYQRNF------SYDRLEPWT 77 F S E YA H I +K SY RN + +PWT Sbjct: 147 EFKSREEEIDYALKHNIPV-----KATKEKPYSYDRNLWGVAIEAGSLEDPWT 194 >gi|85099645|ref|XP_960825.1| hypothetical protein NCU01288 [Neurospora crassa OR74A] gi|28922351|gb|EAA31589.1| hypothetical protein NCU01288 [Neurospora crassa OR74A] gi|28950088|emb|CAD70851.1| related to leucine permease transcriptional regulator SAC3 [Neurospora crassa] Length = 1642 Score = 35.1 bits (80), Expect = 3.4, Method: Composition-based stats. Identities = 7/35 (20%), Positives = 13/35 (37%) Query: 30 LFFPSLEAAEKYASDHGIQYCVIPSCKESQKELSY 64 L F + E A +A +H ++ + Y Sbjct: 587 LRFDTDEEAVAFAEEHNFEFTTWVPPGKPAVSEPY 621 >gi|218296113|ref|ZP_03496882.1| Argininosuccinate synthase [Thermus aquaticus Y51MC23] gi|218243490|gb|EED10019.1| Argininosuccinate synthase [Thermus aquaticus Y51MC23] Length = 400 Score = 34.7 bits (79), Expect = 4.9, Method: Composition-based stats. Identities = 7/26 (26%), Positives = 8/26 (30%) Query: 31 FFPSLEAAEKYASDHGIQYCVIPSCK 56 F + YA HGI V Sbjct: 146 SFKGRQEMIAYAEAHGIPVPVTQEKP 171 >gi|308751119|gb|ADO44602.1| argininosuccinate synthase [Hydrogenobacter thermophilus TK-6] Length = 401 Score = 34.3 bits (78), Expect = 5.1, Method: Composition-based stats. Identities = 11/39 (28%), Positives = 13/39 (33%), Gaps = 5/39 (12%) Query: 23 DTLQQV-----KLFFPSLEAAEKYASDHGIQYCVIPSCK 56 D QV + F S E +YA H I V Sbjct: 137 DPNVQVLAPVREWEFKSREEEVEYALKHSIPVKVTKEKP 175 >gi|288817514|ref|YP_003431861.1| argininosuccinate synthase [Hydrogenobacter thermophilus TK-6] gi|288786913|dbj|BAI68660.1| argininosuccinate synthase [Hydrogenobacter thermophilus TK-6] Length = 398 Score = 34.3 bits (78), Expect = 5.3, Method: Composition-based stats. Identities = 11/39 (28%), Positives = 13/39 (33%), Gaps = 5/39 (12%) Query: 23 DTLQQV-----KLFFPSLEAAEKYASDHGIQYCVIPSCK 56 D QV + F S E +YA H I V Sbjct: 134 DPNVQVLAPVREWEFKSREEEVEYALKHSIPVKVTKEKP 172 Database: nr Posted date: May 13, 2011 4:10 AM Number of letters in database: 999,999,932 Number of sequences in database: 2,987,209 Database: /data/usr2/db/fasta/nr.01 Posted date: May 13, 2011 4:17 AM Number of letters in database: 999,998,956 Number of sequences in database: 2,896,973 Database: /data/usr2/db/fasta/nr.02 Posted date: May 13, 2011 4:23 AM Number of letters in database: 999,999,979 Number of sequences in database: 2,907,862 Database: /data/usr2/db/fasta/nr.03 Posted date: May 13, 2011 4:29 AM Number of letters in database: 999,999,513 Number of sequences in database: 2,932,190 Database: /data/usr2/db/fasta/nr.04 Posted date: May 13, 2011 4:33 AM Number of letters in database: 792,586,372 Number of sequences in database: 2,260,650 Lambda K H 0.308 0.171 0.642 Lambda K H 0.267 0.0525 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 1,950,732,181 Number of Sequences: 13984884 Number of extensions: 83274932 Number of successful extensions: 183726 Number of sequences better than 10.0: 450 Number of HSP's better than 10.0 without gapping: 672 Number of HSP's successfully gapped in prelim test: 44 Number of HSP's that attempted gapping in prelim test: 182861 Number of HSP's gapped (non-prelim): 717 length of query: 78 length of database: 4,792,584,752 effective HSP length: 49 effective length of query: 29 effective length of database: 4,107,325,436 effective search space: 119112437644 effective search space used: 119112437644 T: 11 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.7 bits) S2: 76 (33.5 bits)