RPS-BLAST 2.2.22 [Sep-27-2009]

Database: CddB 
           21,608 sequences; 5,994,473 total letters

Searching..................................................done

Query= gi|254780174|ref|YP_003064587.1| putative oxidoreductase
protein [Candidatus Liberibacter asiaticus str. psy62]
         (78 letters)



>gnl|CDD|180548 PRK06380, PRK06380, metal-dependent hydrolase; Provisional.
          Length = 418

 Score = 27.9 bits (62), Expect = 0.59
 Identities = 10/37 (27%), Positives = 16/37 (43%), Gaps = 10/37 (27%)

Query: 9   PPYIEPLLG----YTSSKDTLQQVKLFFPSLEAAEKY 41
              + P +G    Y ++ +T  + K      E AEKY
Sbjct: 168 EELVTPSIGVQGIYVANDETYLKAK------EIAEKY 198


>gnl|CDD|178012 PLN02387, PLN02387, long-chain-fatty-acid-CoA ligase family
           protein.
          Length = 696

 Score = 27.4 bits (61), Expect = 0.89
 Identities = 17/43 (39%), Positives = 21/43 (48%), Gaps = 7/43 (16%)

Query: 28  VKLFFPSLEAAEKYASDHGIQY------CVIP-SCKESQKELS 63
           V L  PS +A EK+A   GI Y      C    + KE Q+ LS
Sbjct: 599 VALVVPSQQALEKWAKKAGIDYSNFAELCEKEEAVKEVQQSLS 641


>gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional.
          Length = 2084

 Score = 26.3 bits (57), Expect = 1.7
 Identities = 11/26 (42%), Positives = 16/26 (61%)

Query: 43  SDHGIQYCVIPSCKESQKELSYQRNF 68
           SD G + C +P  KE+ KE +Y  +F
Sbjct: 288 SDQGFERCFLPMKKEAGKEWTYASSF 313


>gnl|CDD|180601 PRK06520, PRK06520,
          5-methyltetrahydropteroyltriglutamate--homocysteine
          methyltransferase; Provisional.
          Length = 368

 Score = 25.8 bits (57), Expect = 2.6
 Identities = 8/19 (42%), Positives = 13/19 (68%)

Query: 31 FFPSLEAAEKYASDHGIQY 49
          FF  L+  E+Y ++ GIQ+
Sbjct: 76 FFDGLQGVERYEAEQGIQF 94


>gnl|CDD|164955 PHA02560, FI, major tail sheath protein; Provisional.
          Length = 388

 Score = 24.7 bits (54), Expect = 5.6
 Identities = 7/27 (25%), Positives = 12/27 (44%), Gaps = 3/27 (11%)

Query: 53  PSCKESQKELSYQRNFSYDRLE---PW 76
           P CK  ++  +Y+ NF    +    P 
Sbjct: 160 PGCKTKEEAAAYRENFGQREVMVIWPD 186


>gnl|CDD|183911 PRK13239, PRK13239, alkylmercury lyase; Provisional.
          Length = 206

 Score = 24.2 bits (53), Expect = 8.2
 Identities = 9/15 (60%), Positives = 11/15 (73%)

Query: 31  FFPSLEAAEKYASDH 45
           FF S EAAE + S+H
Sbjct: 164 FFASPEAAEPWLSEH 178


>gnl|CDD|179364 PRK02090, PRK02090, phosphoadenosine phosphosulfate reductase;
           Provisional.
          Length = 241

 Score = 24.0 bits (53), Expect = 8.9
 Identities = 7/20 (35%), Positives = 12/20 (60%)

Query: 28  VKLFFPSLEAAEKYASDHGI 47
           +K++ P   AAE+ A   G+
Sbjct: 96  LKVYRPDASAAEQEARYGGL 115


  Database: CddB
    Posted date:  Feb 4, 2011  9:54 PM
  Number of letters in database: 5,994,473
  Number of sequences in database:  21,608
  
Lambda     K      H
   0.317    0.133    0.406 

Gapped
Lambda     K      H
   0.267   0.0712    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 21608
Number of Hits to DB: 1,240,767
Number of extensions: 57973
Number of successful extensions: 153
Number of sequences better than 10.0: 1
Number of HSP's gapped: 153
Number of HSP's successfully gapped: 14
Length of query: 78
Length of database: 5,994,473
Length adjustment: 48
Effective length of query: 30
Effective length of database: 4,957,289
Effective search space: 148718670
Effective search space used: 148718670
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 50 (23.1 bits)