RPS-BLAST 2.2.22 [Sep-27-2009] Database: CddB 21,608 sequences; 5,994,473 total letters Searching..................................................done Query= gi|254780174|ref|YP_003064587.1| putative oxidoreductase protein [Candidatus Liberibacter asiaticus str. psy62] (78 letters) >gnl|CDD|180548 PRK06380, PRK06380, metal-dependent hydrolase; Provisional. Length = 418 Score = 27.9 bits (62), Expect = 0.59 Identities = 10/37 (27%), Positives = 16/37 (43%), Gaps = 10/37 (27%) Query: 9 PPYIEPLLG----YTSSKDTLQQVKLFFPSLEAAEKY 41 + P +G Y ++ +T + K E AEKY Sbjct: 168 EELVTPSIGVQGIYVANDETYLKAK------EIAEKY 198 >gnl|CDD|178012 PLN02387, PLN02387, long-chain-fatty-acid-CoA ligase family protein. Length = 696 Score = 27.4 bits (61), Expect = 0.89 Identities = 17/43 (39%), Positives = 21/43 (48%), Gaps = 7/43 (16%) Query: 28 VKLFFPSLEAAEKYASDHGIQY------CVIP-SCKESQKELS 63 V L PS +A EK+A GI Y C + KE Q+ LS Sbjct: 599 VALVVPSQQALEKWAKKAGIDYSNFAELCEKEEAVKEVQQSLS 641 >gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional. Length = 2084 Score = 26.3 bits (57), Expect = 1.7 Identities = 11/26 (42%), Positives = 16/26 (61%) Query: 43 SDHGIQYCVIPSCKESQKELSYQRNF 68 SD G + C +P KE+ KE +Y +F Sbjct: 288 SDQGFERCFLPMKKEAGKEWTYASSF 313 >gnl|CDD|180601 PRK06520, PRK06520, 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase; Provisional. Length = 368 Score = 25.8 bits (57), Expect = 2.6 Identities = 8/19 (42%), Positives = 13/19 (68%) Query: 31 FFPSLEAAEKYASDHGIQY 49 FF L+ E+Y ++ GIQ+ Sbjct: 76 FFDGLQGVERYEAEQGIQF 94 >gnl|CDD|164955 PHA02560, FI, major tail sheath protein; Provisional. Length = 388 Score = 24.7 bits (54), Expect = 5.6 Identities = 7/27 (25%), Positives = 12/27 (44%), Gaps = 3/27 (11%) Query: 53 PSCKESQKELSYQRNFSYDRLE---PW 76 P CK ++ +Y+ NF + P Sbjct: 160 PGCKTKEEAAAYRENFGQREVMVIWPD 186 >gnl|CDD|183911 PRK13239, PRK13239, alkylmercury lyase; Provisional. Length = 206 Score = 24.2 bits (53), Expect = 8.2 Identities = 9/15 (60%), Positives = 11/15 (73%) Query: 31 FFPSLEAAEKYASDH 45 FF S EAAE + S+H Sbjct: 164 FFASPEAAEPWLSEH 178 >gnl|CDD|179364 PRK02090, PRK02090, phosphoadenosine phosphosulfate reductase; Provisional. Length = 241 Score = 24.0 bits (53), Expect = 8.9 Identities = 7/20 (35%), Positives = 12/20 (60%) Query: 28 VKLFFPSLEAAEKYASDHGI 47 +K++ P AAE+ A G+ Sbjct: 96 LKVYRPDASAAEQEARYGGL 115 Database: CddB Posted date: Feb 4, 2011 9:54 PM Number of letters in database: 5,994,473 Number of sequences in database: 21,608 Lambda K H 0.317 0.133 0.406 Gapped Lambda K H 0.267 0.0712 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 21608 Number of Hits to DB: 1,240,767 Number of extensions: 57973 Number of successful extensions: 153 Number of sequences better than 10.0: 1 Number of HSP's gapped: 153 Number of HSP's successfully gapped: 14 Length of query: 78 Length of database: 5,994,473 Length adjustment: 48 Effective length of query: 30 Effective length of database: 4,957,289 Effective search space: 148718670 Effective search space used: 148718670 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 50 (23.1 bits)