BLASTP 2.2.22 [Sep-27-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= gi|254780176|ref|YP_003064589.1| hypothetical protein
CLIBASIA_00295 [Candidatus Liberibacter asiaticus str. psy62]
(119 letters)
Database: nr
13,984,884 sequences; 4,792,584,752 total letters
Searching..................................................done
>gi|254780176|ref|YP_003064589.1| hypothetical protein CLIBASIA_00295 [Candidatus Liberibacter
asiaticus str. psy62]
gi|254039853|gb|ACT56649.1| hypothetical protein CLIBASIA_00295 [Candidatus Liberibacter
asiaticus str. psy62]
Length = 119
Score = 125 bits (314), Expect = 2e-27, Method: Composition-based stats.
Identities = 119/119 (100%), Positives = 119/119 (100%)
Query: 1 MAELETAQAEADAKIAEAKAKDSGNQAEIDIARSNAKDKTDLVRIAEAKYKYRSDIVMAI 60
MAELETAQAEADAKIAEAKAKDSGNQAEIDIARSNAKDKTDLVRIAEAKYKYRSDIVMAI
Sbjct: 1 MAELETAQAEADAKIAEAKAKDSGNQAEIDIARSNAKDKTDLVRIAEAKYKYRSDIVMAI 60
Query: 61 EKSKADAIKTMEDRKAKVGVARQERKANESKDAATIITTATVENTKVVETKEAGKTARS 119
EKSKADAIKTMEDRKAKVGVARQERKANESKDAATIITTATVENTKVVETKEAGKTARS
Sbjct: 61 EKSKADAIKTMEDRKAKVGVARQERKANESKDAATIITTATVENTKVVETKEAGKTARS 119
>gi|82541274|ref|XP_724889.1| dihydrolipoamide S-acetyltransferase [Plasmodium yoelii yoelii str.
17XNL]
gi|23479697|gb|EAA16454.1| putative dihydrolipoamide S-acetyltransferase [Plasmodium yoelii
yoelii]
Length = 561
Score = 40.6 bits (93), Expect = 0.061, Method: Composition-based stats.
Identities = 34/124 (27%), Positives = 58/124 (46%), Gaps = 19/124 (15%)
Query: 1 MAELETAQAE-ADAKIAEAKAKDSGNQAEIDIARSNAKDKTDLVRIA-----EAKYKYRS 54
M+++ET E AD + + + G E I + + K + VRIA E ++ +S
Sbjct: 147 MSDVETTSVETADVETTDVE----GESVEKGIYSPSVQSKKNKVRIAKWLCKENEFVNKS 202
Query: 55 DIVMAIEKSKADAIKTMEDRKAKVGV-----ARQERKANESKDAATIITTATVENTKVVE 109
D++ IE K+ T+E G+ ++ A+ K ATI+ T +ENT +
Sbjct: 203 DVIFHIEDDKS----TIEVDSPYTGIIKTILVKEGELADLEKQVATILETNELENTSMNL 258
Query: 110 TKEA 113
+ EA
Sbjct: 259 SSEA 262
>gi|284052568|ref|ZP_06382778.1| SPFH domain-containing protein [Arthrospira platensis str. Paraca]
Length = 523
Score = 40.3 bits (92), Expect = 0.10, Method: Composition-based stats.
Identities = 30/106 (28%), Positives = 57/106 (53%), Gaps = 17/106 (16%)
Query: 3 ELETAQAEADAKIAEAKAK------DSGNQAEIDIARSNAKDKTDLVRIAEAKYKYRSDI 56
E+E ++AEA+ ++A+A K +S ++ ++AR+ A+ RI + + + ++D+
Sbjct: 236 EVEVSKAEAERRVADAMTKRAAVVAESESETAAEVARTQAEVSVQKERIKQVEQQLQADV 295
Query: 57 VM--------AIEKSKADAIKTMEDRKAKVGVARQERKANESKDAA 94
V AI +++ DA + +ED KA+ A R+ ES AA
Sbjct: 296 VAPAEAECKKAIARARGDAAQIIEDGKAQ---AEGTRRLAESWKAA 338
>gi|291571858|dbj|BAI94130.1| band 7 protein [Arthrospira platensis NIES-39]
Length = 523
Score = 39.9 bits (91), Expect = 0.10, Method: Composition-based stats.
Identities = 30/106 (28%), Positives = 57/106 (53%), Gaps = 17/106 (16%)
Query: 3 ELETAQAEADAKIAEAKAK------DSGNQAEIDIARSNAKDKTDLVRIAEAKYKYRSDI 56
E+E ++AEA+ ++A+A K +S ++ ++AR+ A+ RI + + + ++D+
Sbjct: 236 EVEVSKAEAERRVADAMTKRAAVVAESESETAAEVARTQAEVSVQKERIKQVEQQLQADV 295
Query: 57 VM--------AIEKSKADAIKTMEDRKAKVGVARQERKANESKDAA 94
V AI +++ DA + +ED KA+ A R+ ES AA
Sbjct: 296 VAPAEAECKKAIARARGDAAQIIEDGKAQ---AEGTRRLAESWKAA 338
>gi|209524411|ref|ZP_03272960.1| band 7 protein [Arthrospira maxima CS-328]
gi|209495202|gb|EDZ95508.1| band 7 protein [Arthrospira maxima CS-328]
Length = 523
Score = 39.1 bits (89), Expect = 0.18, Method: Composition-based stats.
Identities = 30/106 (28%), Positives = 57/106 (53%), Gaps = 17/106 (16%)
Query: 3 ELETAQAEADAKIAEAKAK------DSGNQAEIDIARSNAKDKTDLVRIAEAKYKYRSDI 56
E+E ++AEA+ ++A+A K +S ++ ++AR+ A+ RI + + + ++D+
Sbjct: 236 EVEVSKAEAERRVADAMTKRAAVVAESESETAAEVARTQAEVSVQKERIKQVEQQLQADV 295
Query: 57 VM--------AIEKSKADAIKTMEDRKAKVGVARQERKANESKDAA 94
V AI +++ DA + +ED KA+ A R+ ES AA
Sbjct: 296 VAPAEAECKKAIARARGDAAQIIEDGKAQ---AEGTRRLAESWKAA 338
>gi|327539858|gb|EGF26461.1| efflux transporter, RND family, MFP subunit [Rhodopirellula baltica
WH47]
Length = 515
Score = 39.1 bits (89), Expect = 0.21, Method: Composition-based stats.
Identities = 31/115 (26%), Positives = 58/115 (50%), Gaps = 11/115 (9%)
Query: 3 ELETAQAEADAKIAEAKAKDSGNQAEIDIARSNAKDKTDLVRIAEAKYKYRSDIVMAIEK 62
E E A A+A + +E++ K + +A ++AR+N + +A+ +YK ++V +
Sbjct: 156 EAELAAAQARLQQSESQFKQA--KAMTEVARANLLQSEAQLNLADVRYKRTQNLV----E 209
Query: 63 SKADAIKTMEDRKAKVGVARQE----RKANESKDAATIITTATVENTKV-VETKE 112
A + ++DR+A+ A+ + R + S +AA A +E K VET E
Sbjct: 210 RNASSQDELDDREAEFLKAKADIEGVRASLNSSEAAIATAQAEIELAKAGVETAE 264
>gi|307328251|ref|ZP_07607429.1| thymidylate kinase [Streptomyces violaceusniger Tu 4113]
gi|306886085|gb|EFN17093.1| thymidylate kinase [Streptomyces violaceusniger Tu 4113]
Length = 1100
Score = 38.7 bits (88), Expect = 0.23, Method: Composition-based stats.
Identities = 22/78 (28%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 8 QAEADAKIAEAKAKDSGNQAEIDIARSNAKDKTDLVRIAEAKYKYRSDIVMAIEKSKADA 67
+AE A+ A +A+D+ +AE D R A+D+ V + + ++ A+ +++A+A
Sbjct: 777 EAERQAEAARQRAEDARRRAEEDRKRIEAEDRARAVDEERRRLEAEAE---AVRRAEAEA 833
Query: 68 IKTMEDRKAKVGVARQER 85
+ E RKA+ + R E+
Sbjct: 834 RRQEEQRKAEEALLRAEQ 851
>gi|119495192|ref|XP_001264386.1| intracellular protein transport protein (UsoA), putative
[Neosartorya fischeri NRRL 181]
gi|119412548|gb|EAW22489.1| intracellular protein transport protein (UsoA), putative
[Neosartorya fischeri NRRL 181]
Length = 1055
Score = 38.3 bits (87), Expect = 0.36, Method: Composition-based stats.
Identities = 31/116 (26%), Positives = 57/116 (49%), Gaps = 4/116 (3%)
Query: 2 AELETAQAEADAKIAEAKAKDSGNQAEIDIARSNAKDKTDLVRIAEAKYKYRSDIVMAIE 61
+EL+ A+ +A++A+ +AK Q+E+D A+ + + +R+ + S++ E
Sbjct: 881 SELDKAKEGHEAELADLRAKAQTVQSELDTAKQEHETEISGLRLKAQSLQ--SELDSGTE 938
Query: 62 KSKADAIKTMEDRKAKVGVARQERKANESK-DAATIITTATVENTKVVETKEAGKT 116
KSK D +D +K+ + K ESK + A + E K V+ + GKT
Sbjct: 939 KSKEDLQAVHDDYSSKLSELEKRVKLAESKAEKAEADALRSAETLKEVQA-QLGKT 993
>gi|32476774|ref|NP_869768.1| acriflavin resistance protein A [Rhodopirellula baltica SH 1]
gi|32447320|emb|CAD77146.1| acriflavine resistance protein A [Precursor] [Rhodopirellula
baltica SH 1]
Length = 467
Score = 38.3 bits (87), Expect = 0.36, Method: Composition-based stats.
Identities = 31/115 (26%), Positives = 58/115 (50%), Gaps = 11/115 (9%)
Query: 3 ELETAQAEADAKIAEAKAKDSGNQAEIDIARSNAKDKTDLVRIAEAKYKYRSDIVMAIEK 62
E E A A+A + +E++ K + +A ++AR+N + +A+ +YK ++V +
Sbjct: 108 EAELAAAQARLQQSESQFKQA--KAMTEVARANLLQSEAQLNLADVRYKRTQNLV----E 161
Query: 63 SKADAIKTMEDRKAKVGVARQE----RKANESKDAATIITTATVENTKV-VETKE 112
A + ++DR+A+ A+ + R + S +AA A +E K VET E
Sbjct: 162 RNASSQDELDDREAEFLKAKADIEGVRASLNSSEAAIATAQAEIELAKAGVETAE 216
>gi|168700562|ref|ZP_02732839.1| hypothetical protein GobsU_13612 [Gemmata obscuriglobus UQM 2246]
Length = 419
Score = 38.3 bits (87), Expect = 0.38, Method: Composition-based stats.
Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 6/88 (6%)
Query: 11 ADAKIA--EAKAKDSGNQAEIDIARSNAKDKTDLVRIAEAKYKYRSDIVMA----IEKSK 64
DAKIA +A K G AE+ + KDK L AEA+ K + + KS
Sbjct: 130 GDAKIAKFDAAGKQLGETAELPHVAAAMKDKDALKTRAEAQLKKEKEQMAQSYGNARKSI 189
Query: 65 ADAIKTMEDRKAKVGVARQERKANESKD 92
A+ +K +ED+KA+ +ER+ + K+
Sbjct: 190 AEQLKRIEDKKAEERSKTEERQIEQFKN 217
>gi|302670141|ref|YP_003830101.1| ABC transporter permease [Butyrivibrio proteoclasticus B316]
gi|302394614|gb|ADL33519.1| ABC transporter permease protein [Butyrivibrio proteoclasticus
B316]
Length = 1188
Score = 38.3 bits (87), Expect = 0.39, Method: Composition-based stats.
Identities = 34/113 (30%), Positives = 52/113 (46%), Gaps = 12/113 (10%)
Query: 3 ELETAQAEADAKIAEAKAKDSGNQAEIDIARSNAKDKTDLVRIAEAKYKYRSDIVMAI-- 60
+L AQAE D K EA+A+ + +AE + ++ DK I +AK Y S+ A
Sbjct: 533 QLADAQAEYDRKEPEARAELASKEAEFEKQKAEGADK-----IKKAKGTYASNKAKAQEE 587
Query: 61 ----EKSKADAIKTMEDRKAKVGVARQERKANESKDAATIITTATVENTKVVE 109
EK +A+ E++K K G + + E DA I A + K +E
Sbjct: 588 LTSREKEFDEAVAEFEEKK-KDGEEQLSQARKEYADAKAEIAKALSDARKEIE 639
>gi|119485088|ref|ZP_01619473.1| Band 7 protein [Lyngbya sp. PCC 8106]
gi|119457316|gb|EAW38441.1| Band 7 protein [Lyngbya sp. PCC 8106]
Length = 520
Score = 37.9 bits (86), Expect = 0.43, Method: Composition-based stats.
Identities = 31/106 (29%), Positives = 56/106 (52%), Gaps = 17/106 (16%)
Query: 3 ELETAQAEADAKIAEAKAK------DSGNQAEIDIARSNAKDKTDLVRIAEAKYKYRSDI 56
E+E A+AEA+ ++ +A K +S ++ ++AR+ A+ RI + + + ++DI
Sbjct: 236 EIEVARAEAERRVKDAMTKRDAVIAESESEIASEVARTQAELPVQKARIIQVEQRLQADI 295
Query: 57 VM--------AIEKSKADAIKTMEDRKAKVGVARQERKANESKDAA 94
V AI ++K DA + +ED KA+ A ++ ES AA
Sbjct: 296 VAPAEAECKRAIARAKGDAAQIIEDGKAR---AEGTQRLAESWKAA 338
>gi|119356503|ref|YP_911147.1| Smr protein/MutS2 [Chlorobium phaeobacteroides DSM 266]
gi|119353852|gb|ABL64723.1| Smr protein/MutS2 [Chlorobium phaeobacteroides DSM 266]
Length = 794
Score = 37.6 bits (85), Expect = 0.58, Method: Composition-based stats.
Identities = 24/91 (26%), Positives = 50/91 (54%), Gaps = 9/91 (9%)
Query: 3 ELETAQAEADAKIAEAKAKDSG---NQAEIDIARSNAKDKTDLVRIAEAKYKYRSDIVMA 59
+LE +A+ ++ +A+++G Q E+ + + K + A+ + R +IV
Sbjct: 541 QLEGERADLAERVIALRAEEAGVERKQRELRLGAARELQK----EVEHARKEIR-EIVQE 595
Query: 60 IEKSKADAIKTMEDRKAKVGVARQERKANES 90
+ + ADA KT++D + K+G+ +QE + +ES
Sbjct: 596 VRNAPADA-KTVQDSRKKLGLKKQEAEKSES 625
>gi|320108783|ref|YP_004184373.1| hypothetical protein AciPR4_3626 [Terriglobus saanensis SP1PR4]
gi|319927304|gb|ADV84379.1| hypothetical protein AciPR4_3626 [Terriglobus saanensis SP1PR4]
Length = 427
Score = 37.2 bits (84), Expect = 0.68, Method: Composition-based stats.
Identities = 28/104 (26%), Positives = 54/104 (51%), Gaps = 4/104 (3%)
Query: 4 LETAQAEADAKIAEAKAKDSGNQAEIDIARSNAK---DKTDLVRIAEAKYKYRSDIVMAI 60
L A A DA+++E + + +G++AE D R++AK D+ D + A+A K +SD +A
Sbjct: 162 LNAAIAVEDARLSEMEQQVAGSKAEADKLRADAKDAQDRLDALTAADATSKSQSDAQVAA 221
Query: 61 EKSKADAIKT-MEDRKAKVGVARQERKANESKDAATIITTATVE 103
+ DA + D +A + E A ++ ++ A+++
Sbjct: 222 LTQERDATAAKLRDAQASYQTVQYELDALRNQHKQDLLHLASLD 265
>gi|159028037|emb|CAO87997.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
Length = 475
Score = 36.8 bits (83), Expect = 1.0, Method: Composition-based stats.
Identities = 23/89 (25%), Positives = 46/89 (51%), Gaps = 14/89 (15%)
Query: 3 ELETAQAEADAKIAEAKAKDSGNQAEI------DIARSNAKDKTDLVRIAEAKYKYRSDI 56
+LE A+A+A+ ++ + + K AE+ D+A+ A+ RI + K + ++D+
Sbjct: 289 DLEIAKADAEKRVRDTQTKRGAMIAEVESVVMSDLAKVQAEVAVQTARIKQVKQQLQADV 348
Query: 57 V--------MAIEKSKADAIKTMEDRKAK 77
+ AI K++ +A K +E KA+
Sbjct: 349 IAPAAAECQQAIAKARGEAAKIIEQGKAQ 377
>gi|197116844|ref|YP_002137271.1| TPR domain-containing protein [Geobacter bemidjiensis Bem]
gi|197086204|gb|ACH37475.1| TPR domain protein [Geobacter bemidjiensis Bem]
Length = 2741
Score = 36.8 bits (83), Expect = 1.1, Method: Composition-based stats.
Identities = 28/82 (34%), Positives = 47/82 (57%), Gaps = 10/82 (12%)
Query: 13 AKIAEAKAKDSGNQAEIDIARSNAKDKTDLVRIAEAKYKYRSDIVMAIEKSKADAIKTME 72
A++A+A D NQA+I +A +A+ K+ L AEA Y+ ++ ADA+ E
Sbjct: 2189 AQLADAIG-DKVNQAKIHLALGDARAKSLLNAQAEASYRKALEL--------ADAMLVRE 2239
Query: 73 DR-KAKVGVARQERKANESKDA 93
R +A +G+AR +++ +SK A
Sbjct: 2240 VRWRALLGLARLQQQGGDSKAA 2261
>gi|320164322|gb|EFW41221.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 828
Score = 36.4 bits (82), Expect = 1.2, Method: Composition-based stats.
Identities = 31/93 (33%), Positives = 52/93 (55%), Gaps = 4/93 (4%)
Query: 4 LETAQAEADAKIAEAKAKDSGNQAEIDIARSNAKD-KTDLVRIAEAKYKYRSDIVMAIEK 62
LE+++A+ DAK+ AKA+ + AE+D RS + K VR E K R+++ A ++
Sbjct: 457 LESSRADMDAKLEIAKAELAQETAELDKLRSAVDEQKMTSVRQEEELRKLRNEVEQA-QR 515
Query: 63 SKADAIKTMEDRKAKVGVARQERKANESKDAAT 95
+A ++ D + K VA+ E K E+K A+
Sbjct: 516 EQA-RLREQLDTETKT-VAQLEAKIEEAKSNAS 546
>gi|159131497|gb|EDP56610.1| intracellular protein transport protein (UsoA), putative
[Aspergillus fumigatus A1163]
Length = 1061
Score = 36.4 bits (82), Expect = 1.2, Method: Composition-based stats.
Identities = 30/116 (25%), Positives = 57/116 (49%), Gaps = 4/116 (3%)
Query: 2 AELETAQAEADAKIAEAKAKDSGNQAEIDIARSNAKDKTDLVRIAEAKYKYRSDIVMAIE 61
+EL+ A+ +A++A+ +AK Q+E+D A+ + + +R+ + S++ E
Sbjct: 881 SELDKAKEGHEAELADLRAKAQTVQSELDTAKQEHETEISGLRVKAQSLQ--SELDSRTE 938
Query: 62 KSKADAIKTMEDRKAKVGVARQERKANESK-DAATIITTATVENTKVVETKEAGKT 116
+SK D +D +K+ + K ESK + A + E K V+ + GKT
Sbjct: 939 RSKEDLQAVHDDYLSKLSELEKRVKLAESKAEKAEADALKSAETLKEVQAR-LGKT 993
>gi|253699111|ref|YP_003020300.1| hypothetical protein GM21_0462 [Geobacter sp. M21]
gi|251773961|gb|ACT16542.1| Tetratricopeptide TPR_2 repeat protein [Geobacter sp. M21]
Length = 2741
Score = 36.4 bits (82), Expect = 1.3, Method: Composition-based stats.
Identities = 28/82 (34%), Positives = 47/82 (57%), Gaps = 10/82 (12%)
Query: 13 AKIAEAKAKDSGNQAEIDIARSNAKDKTDLVRIAEAKYKYRSDIVMAIEKSKADAIKTME 72
A++A+A D NQA+I +A +A+ K+ L AEA Y+ + +DA+ E
Sbjct: 2189 AELADAIG-DKVNQAKIHLALGDARAKSRLDAQAEASYRKALGL--------SDAMLVRE 2239
Query: 73 DR-KAKVGVARQERKANESKDA 93
R +A +G+AR +++A +SK A
Sbjct: 2240 VRWRALLGLARLQQQAGDSKAA 2261
>gi|70995974|ref|XP_752742.1| intracellular protein transport protein (UsoA) [Aspergillus
fumigatus Af293]
gi|44889965|emb|CAD29605.2| transport protein, putative [Aspergillus fumigatus]
gi|66850377|gb|EAL90704.1| intracellular protein transport protein (UsoA), putative
[Aspergillus fumigatus Af293]
Length = 1061
Score = 36.4 bits (82), Expect = 1.3, Method: Composition-based stats.
Identities = 30/116 (25%), Positives = 57/116 (49%), Gaps = 4/116 (3%)
Query: 2 AELETAQAEADAKIAEAKAKDSGNQAEIDIARSNAKDKTDLVRIAEAKYKYRSDIVMAIE 61
+EL+ A+ +A++A+ +AK Q+E+D A+ + + +R+ + S++ E
Sbjct: 881 SELDKAKEGHEAELADLRAKAQTVQSELDTAKQEHETEISGLRVKAQSLQ--SELDSRTE 938
Query: 62 KSKADAIKTMEDRKAKVGVARQERKANESK-DAATIITTATVENTKVVETKEAGKT 116
+SK D +D +K+ + K ESK + A + E K V+ + GKT
Sbjct: 939 RSKEDLQAVHDDYLSKLSELEKRVKLAESKAEKAEADALKSAETLKEVQA-QLGKT 993
>gi|227833721|ref|YP_002835428.1| trigger factor [Corynebacterium aurimucosum ATCC 700975]
gi|262184727|ref|ZP_06044148.1| trigger factor [Corynebacterium aurimucosum ATCC 700975]
gi|254788997|sp|C3PI36|TIG_CORA7 RecName: Full=Trigger factor; Short=TF
gi|227454737|gb|ACP33490.1| trigger factor [Corynebacterium aurimucosum ATCC 700975]
Length = 451
Score = 36.0 bits (81), Expect = 1.5, Method: Composition-based stats.
Identities = 28/100 (28%), Positives = 46/100 (46%), Gaps = 7/100 (7%)
Query: 26 QAEIDIARSNAKDKTDLVRIAEAKYKYR-------SDIVMAIEKSKADAIKTMEDRKAKV 78
Q EIDIA+ D + + + ++ S V A+E S+ D K +ED ++
Sbjct: 90 QPEIDIAKLEDNDFVEFTAEVDIRPEFEVPDFSKISVKVPALETSEEDVDKALEDLASRF 149
Query: 79 GVARQERKANESKDAATIITTATVENTKVVETKEAGKTAR 118
G + ++ ++ D A I T V+ TK+ E G T R
Sbjct: 150 GELKDTKRKMKTGDYAIIDITTEVDGTKLDEASHEGMTYR 189
>gi|78224167|ref|YP_385914.1| MutS 2 protein [Geobacter metallireducens GS-15]
gi|78195422|gb|ABB33189.1| MutS 2 protein [Geobacter metallireducens GS-15]
Length = 785
Score = 35.6 bits (80), Expect = 2.0, Method: Composition-based stats.
Identities = 26/102 (25%), Positives = 53/102 (51%), Gaps = 6/102 (5%)
Query: 1 MAELETAQAEADAKIAEAKAKDSGNQAEIDIARSNAKDKTDLVR--IAEAKYKYRSDIVM 58
++ +ET E A++ + + + AE + R +A++K +VR +AEA+ K R
Sbjct: 517 LSRMETEFHELLAELKDQRRRHEEALAEAERLRRDAEEKARIVRERLAEAEAKRRE---- 572
Query: 59 AIEKSKADAIKTMEDRKAKVGVARQERKANESKDAATIITTA 100
A+EK+ +A + + + +V +E + +S++A I A
Sbjct: 573 AVEKAFQEAKEIVRSARREVNAIIEEARKEKSREARKKIDEA 614
>gi|121701239|ref|XP_001268884.1| intracellular protein transport protein (UsoA), putative
[Aspergillus clavatus NRRL 1]
gi|119397027|gb|EAW07458.1| intracellular protein transport protein (UsoA), putative
[Aspergillus clavatus NRRL 1]
Length = 1048
Score = 35.6 bits (80), Expect = 2.0, Method: Composition-based stats.
Identities = 29/108 (26%), Positives = 52/108 (48%), Gaps = 14/108 (12%)
Query: 2 AELETAQAEADAKIAEAKAKDSGNQAEIDIARSNAKDKTDLVRIAEAKYKYRSDIVMAIE 61
+EL TA+ E + ++A+ KAK+ QAE + S+ + K +S++ A+E
Sbjct: 881 SELATARKEHETEVADLKAKNETLQAEHNTKISDVQAKAQ---------SLQSELESAME 931
Query: 62 KSKADAIKTMEDRKAKVGVARQERKANESKDAATIITTATVENTKVVE 109
KSK D +D +K + N+++DA + + A + K E
Sbjct: 932 KSKKDLQVLHDDYSSKC-----SKLENQAEDAKSRVKKAEADAHKSEE 974
>gi|225853742|ref|YP_002735254.1| hypothetical protein SPJ_0142 [Streptococcus pneumoniae JJA]
gi|225722642|gb|ACO18495.1| conserved hypothetical protein [Streptococcus pneumoniae JJA]
Length = 450
Score = 35.6 bits (80), Expect = 2.1, Method: Composition-based stats.
Identities = 24/88 (27%), Positives = 45/88 (51%), Gaps = 1/88 (1%)
Query: 2 AELETAQAEADAKIAEAKAKDSGNQAEIDIARSNAKDKTDLVRIAEAK-YKYRSDIVMAI 60
A+LET +E KI K + +EID +SN KD ++ Y + +V +
Sbjct: 217 AKLETKISEITTKIEALKTNITSKNSEIDSQQSNIKDMNRTYNDPTSQAYNIYAQLVSEL 276
Query: 61 EKSKADAIKTMEDRKAKVGVARQERKAN 88
++++ K++ + +A +GVA + KA+
Sbjct: 277 GTARSNNNKSITELEANLGVATGQDKAH 304
>gi|121595243|ref|YP_987139.1| RND efflux system outer membrane lipoprotein [Acidovorax sp. JS42]
gi|120607323|gb|ABM43063.1| RND efflux system, outer membrane lipoprotein, NodT family
[Acidovorax sp. JS42]
Length = 511
Score = 35.6 bits (80), Expect = 2.1, Method: Composition-based stats.
Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 3 ELETAQAEADAKIAEAKAKDSGNQAEIDIARSNAKDKTDLVRIAEAKYKYRSDIVMAIEK 62
E E A+ A++A A + G QA++DI R N + +R+AE+ + R+ + E
Sbjct: 176 EREAARVALSAEVARAYLQLRGAQAQLDITRQNLEVADRTLRLAES--RERNGVATRFET 233
Query: 63 SKADA-IKTME 72
S A A + T+E
Sbjct: 234 SSARAQLATVE 244
>gi|168487067|ref|ZP_02711575.1| conserved hypothetical protein [Streptococcus pneumoniae
CDC1087-00]
gi|225857982|ref|YP_002739492.1| hypothetical protein SP70585_0182 [Streptococcus pneumoniae 70585]
gi|183570031|gb|EDT90559.1| conserved hypothetical protein [Streptococcus pneumoniae
CDC1087-00]
gi|225722007|gb|ACO17861.1| conserved hypothetical protein [Streptococcus pneumoniae 70585]
Length = 450
Score = 35.6 bits (80), Expect = 2.4, Method: Composition-based stats.
Identities = 23/88 (26%), Positives = 45/88 (51%), Gaps = 1/88 (1%)
Query: 2 AELETAQAEADAKIAEAKAKDSGNQAEIDIARSNAKDKTDLVRIAEAK-YKYRSDIVMAI 60
A+LET +E KI K + +EID +SN KD ++ Y + ++ +
Sbjct: 217 AKLETKISEITTKIEALKTNITSKNSEIDSQQSNIKDMNRTYNDPTSQAYNIYAQLISEL 276
Query: 61 EKSKADAIKTMEDRKAKVGVARQERKAN 88
++++ K++ + +A +GVA + KA+
Sbjct: 277 GTARSNNNKSITELEANLGVATGQDKAH 304
>gi|148983506|ref|ZP_01816825.1| hypothetical protein CGSSp3BS71_05229 [Streptococcus pneumoniae
SP3-BS71]
gi|147923653|gb|EDK74765.1| hypothetical protein CGSSp3BS71_05229 [Streptococcus pneumoniae
SP3-BS71]
gi|301799286|emb|CBW31812.1| unnamed protein product [Streptococcus pneumoniae OXC141]
Length = 450
Score = 35.6 bits (80), Expect = 2.4, Method: Composition-based stats.
Identities = 23/88 (26%), Positives = 45/88 (51%), Gaps = 1/88 (1%)
Query: 2 AELETAQAEADAKIAEAKAKDSGNQAEIDIARSNAKDKTDLVRIAEAK-YKYRSDIVMAI 60
A+LET +E KI K + +EID +SN KD ++ Y + ++ +
Sbjct: 217 AKLETKISEITTKIEALKTNITSKNSEIDSQQSNIKDMNRTYNDPTSQAYNIYAQLISEL 276
Query: 61 EKSKADAIKTMEDRKAKVGVARQERKAN 88
++++ K++ + +A +GVA + KA+
Sbjct: 277 GTARSNNNKSITELEANLGVATGQDKAH 304
>gi|89100461|ref|ZP_01173323.1| hypothetical protein B14911_05506 [Bacillus sp. NRRL B-14911]
gi|89084804|gb|EAR63943.1| hypothetical protein B14911_05506 [Bacillus sp. NRRL B-14911]
Length = 332
Score = 35.6 bits (80), Expect = 2.4, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 29/50 (58%)
Query: 2 AELETAQAEADAKIAEAKAKDSGNQAEIDIARSNAKDKTDLVRIAEAKYK 51
AEL+T QAEAD KIA+AKA++ A AK + ++ EA+ K
Sbjct: 234 AELQTEQAEADKKIAQAKAEERRAMAVAQEQEMKAKVEEMRAKVVEAEAK 283
>gi|83649547|ref|YP_437982.1| outer membrane protein [Hahella chejuensis KCTC 2396]
gi|83637590|gb|ABC33557.1| Outer membrane protein [Hahella chejuensis KCTC 2396]
Length = 480
Score = 35.6 bits (80), Expect = 2.5, Method: Composition-based stats.
Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 5/88 (5%)
Query: 2 AELETAQAEADAKIAEAKAKDSGNQAEIDIARSNAKDKTDLVRIAEAKYKYRSDIVMAIE 61
A L Q E A++ A G QA++ +A+ N ++ +V + EAKYK + +
Sbjct: 159 AALRNVQVEIIAEVVRVYADLRGAQAQVQVAQRNLENLKSVVDLTEAKYKSGVGAELDVV 218
Query: 62 KSKAD---AIKTMEDRKAKVGVARQERK 86
+SKA A T+ +A+ +AR E +
Sbjct: 219 RSKAQYAGAQATLAPLQAR--IARDEYR 244
>gi|31414576|dbj|BAC77268.1| UsoAp [Emericella nidulans]
Length = 1103
Score = 35.3 bits (79), Expect = 2.9, Method: Composition-based stats.
Identities = 32/128 (25%), Positives = 62/128 (48%), Gaps = 12/128 (9%)
Query: 2 AELETAQAEADAKIAEAKAKDSGNQAEIDIARSNAKDKTDLVRIAEAKYKYRSDIVMAIE 61
+E+E+ + + ++++ K G Q+E+D AR + ++++V++ A R+++ E
Sbjct: 928 SEVESTKEQRANEVSDLHKKIQGLQSELDSARK--QHESEVVKLESANETVRAELNTVKE 985
Query: 62 KSKADAIKTMEDRKAKVGV----ARQ-----ERKANESKDAATIITTATVENTKVV-ETK 111
+S D ED +K A+Q ER E++ AA + A K + ETK
Sbjct: 986 QSTQDLEAVREDYSSKCSALENRAQQAESEVERLEAEARKAAHALEEAQKALEKALQETK 1045
Query: 112 EAGKTARS 119
E + +S
Sbjct: 1046 EKEEARQS 1053
>gi|91205782|ref|YP_538137.1| multidrug resistance protein A [Rickettsia bellii RML369-C]
gi|91069326|gb|ABE05048.1| Multidrug resistance protein A [Rickettsia bellii RML369-C]
Length = 353
Score = 35.3 bits (79), Expect = 2.9, Method: Composition-based stats.
Identities = 30/111 (27%), Positives = 54/111 (48%), Gaps = 6/111 (5%)
Query: 6 TAQAEADAKIAEAKAKDSGNQAEIDIARSNAKDKTDLV-RIAEAKYKYRSDIVMAIEKSK 64
T A DA I++ A+ +G + + + +K DL+ I + YK + + A+E S
Sbjct: 45 TDNAYIDADISDVSAEINGVLTNLLVTNNTKVNKGDLIGEIDDRDYKAK---LAALEASI 101
Query: 65 ADAIKTME--DRKAKVGVARQERKANESKDAATIITTATVENTKVVETKEA 113
+ K +E D+K +G + E+ + K AAT + + T+V E +A
Sbjct: 102 GASEKNIEIIDQKISIGQNQLEQSGEKLKLAATSFNIVSTDFTRVQELNKA 152
>gi|168489411|ref|ZP_02713610.1| conserved hypothetical protein [Streptococcus pneumoniae SP195]
gi|183572030|gb|EDT92558.1| conserved hypothetical protein [Streptococcus pneumoniae SP195]
Length = 449
Score = 35.3 bits (79), Expect = 3.0, Method: Composition-based stats.
Identities = 23/88 (26%), Positives = 45/88 (51%), Gaps = 1/88 (1%)
Query: 2 AELETAQAEADAKIAEAKAKDSGNQAEIDIARSNAKDKTDLVRIAEAK-YKYRSDIVMAI 60
A+LET +E KI K + +EID +SN KD ++ Y + ++ +
Sbjct: 217 AKLETKISEITTKIEALKTNITSKNSEIDSQQSNIKDMNRTYNNPTSQAYNIYAQLISEL 276
Query: 61 EKSKADAIKTMEDRKAKVGVARQERKAN 88
++++ K++ + +A +GVA + KA+
Sbjct: 277 GTARSNNNKSITELEANLGVATGQDKAH 304
>gi|148994314|ref|ZP_01823578.1| hypothetical protein CGSSp9BS68_07267 [Streptococcus pneumoniae
SP9-BS68]
gi|147927344|gb|EDK78376.1| hypothetical protein CGSSp9BS68_07267 [Streptococcus pneumoniae
SP9-BS68]
gi|332075786|gb|EGI86253.1| hypothetical protein SPAR50_0121 [Streptococcus pneumoniae GA17570]
Length = 450
Score = 35.3 bits (79), Expect = 3.1, Method: Composition-based stats.
Identities = 23/88 (26%), Positives = 45/88 (51%), Gaps = 1/88 (1%)
Query: 2 AELETAQAEADAKIAEAKAKDSGNQAEIDIARSNAKDKTDLVRIAEAK-YKYRSDIVMAI 60
A+LET +E KI K + +EID +SN KD ++ Y + ++ +
Sbjct: 217 AKLETKISEITTKIEALKTNITSKNSEIDSQQSNIKDMNRTYNNPTSQAYNIYAQLISEL 276
Query: 61 EKSKADAIKTMEDRKAKVGVARQERKAN 88
++++ K++ + +A +GVA + KA+
Sbjct: 277 GTARSNNNKSITELEANLGVATGQDKAH 304
>gi|171912957|ref|ZP_02928427.1| band 7 protein [Verrucomicrobium spinosum DSM 4136]
Length = 485
Score = 35.3 bits (79), Expect = 3.3, Method: Composition-based stats.
Identities = 39/121 (32%), Positives = 64/121 (52%), Gaps = 14/121 (11%)
Query: 2 AELETAQAEADAKI----AEAKAKDSGNQAEIDIARSNAKDKTDLVRIAEAKYKYRSDIV 57
E+ AQA+ + KI A+A+A N A +DIA SNA LV+ AEA + +
Sbjct: 217 GEIGRAQAQKEQKIVVAQAQAEATTGENLAAVDIANSNA---NRLVQEAEANRQAEAAQN 273
Query: 58 MAIEKSKADAIKTMEDRKAKVGVARQERKANESKDAATIITTATVENTKVVETKEAGKTA 117
+A + + +A + R+A+ VAR E+ +++ A+++ A VE + +ET A A
Sbjct: 274 VANARVQQEAY--LAQREAE--VARAEK--DKASQYASVVVPAEVEKLR-METIAAADAA 326
Query: 118 R 118
R
Sbjct: 327 R 327
>gi|281357218|ref|ZP_06243707.1| phage tail tape measure protein, TP901 family [Victivallis vadensis
ATCC BAA-548]
gi|281316249|gb|EFB00274.1| phage tail tape measure protein, TP901 family [Victivallis vadensis
ATCC BAA-548]
Length = 898
Score = 34.9 bits (78), Expect = 3.6, Method: Composition-based stats.
Identities = 31/118 (26%), Positives = 55/118 (46%), Gaps = 12/118 (10%)
Query: 2 AELETAQAEADAKIAEAKAKDSGNQAEIDIARSNAKDKTDLVRIAEAKYKYRSDIVMAIE 61
AE+ A++E + + E K + + A+ID A+ ++ T+ R AE ++ A+
Sbjct: 786 AEINAAKSEWQSAMDEVKQRAAEKAAQIDEAKEKSEAATENTRNAETRFNSSFGGGKAVG 845
Query: 62 KSKADAIKTMEDRKAKVGVAR--QERKANESKDAATIITTATVENTKVVETKEAGKTA 117
A+A+ M +G A QER A S+ I + T E + ++ + G TA
Sbjct: 846 AWSAEALDAM------LGGANNAQERTARASEQ----IVSNTRETNRQIKKLQGGSTA 893
>gi|15902152|ref|NP_357702.1| hypothetical protein spr0108 [Streptococcus pneumoniae R6]
gi|116516521|ref|YP_815617.1| hypothetical protein SPD_0115 [Streptococcus pneumoniae D39]
gi|15457645|gb|AAK98912.1| Conserved hypothetical protein [Streptococcus pneumoniae R6]
gi|116077097|gb|ABJ54817.1| conserved hypothetical protein [Streptococcus pneumoniae D39]
Length = 450
Score = 34.9 bits (78), Expect = 4.1, Method: Composition-based stats.
Identities = 24/88 (27%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Query: 2 AELETAQAEADAKIAEAKAKDSGNQAEIDIARSNAKDKTDLVRIAEAK-YKYRSDIVMAI 60
A+LET E KI K + +EID +SN KD ++ Y + +V +
Sbjct: 217 AKLETKILEITTKIEALKTNITSKNSEIDSQQSNIKDMNRTYNDPTSQAYNIYAQLVSEL 276
Query: 61 EKSKADAIKTMEDRKAKVGVARQERKAN 88
++++ K++ + +A +GVA + KA+
Sbjct: 277 GTARSNNNKSITELEANLGVATGQDKAH 304
>gi|75907620|ref|YP_321916.1| hypothetical protein Ava_1398 [Anabaena variabilis ATCC 29413]
gi|75701345|gb|ABA21021.1| Band 7 protein [Anabaena variabilis ATCC 29413]
Length = 422
Score = 34.9 bits (78), Expect = 4.2, Method: Composition-based stats.
Identities = 30/106 (28%), Positives = 55/106 (51%), Gaps = 16/106 (15%)
Query: 3 ELETAQAEADAKIAEAKAKDSGNQAEID------IARSNAKDKTDLVRIAEAKYKYRSDI 56
+L+ A+AEA+ ++ +A K + AE++ IA+ A+ RI + + + ++DI
Sbjct: 236 DLQIAKAEAERRVRDAITKRTAVIAEVESVVNSQIAKVQAEVAVQTERIIQVENQLQADI 295
Query: 57 V--------MAIEKSKADAIKTMEDRKAKVGVARQERKANESKDAA 94
V AI ++K DA K +E+ KA+ A +R A ++A
Sbjct: 296 VAPAEAECQTAIAQAKGDAAKIIEEGKAQ--AAGTQRLAESWQNAG 339
>gi|19703613|ref|NP_603175.1| DNA repair protein recN [Fusobacterium nucleatum subsp. nucleatum
ATCC 25586]
gi|19713719|gb|AAL94474.1| DNA repair protein recN [Fusobacterium nucleatum subsp. nucleatum
ATCC 25586]
Length = 558
Score = 34.9 bits (78), Expect = 4.2, Method: Composition-based stats.
Identities = 25/83 (30%), Positives = 38/83 (45%), Gaps = 2/83 (2%)
Query: 22 DSGNQAEIDIARSNAKDKTDLVRIAEAKYKYRSDIVMAIEKSKADAIK--TMEDRKAKVG 79
DSG+ ++ + K K + +IAE R +I + IE + +K MED K KV
Sbjct: 342 DSGDFKTKELKKELNKIKDEYDKIAEKLTNSRKEIAVKIENELLNELKFLNMEDAKLKVQ 401
Query: 80 VARQERKANESKDAATIITTATV 102
+ + ER NE D + V
Sbjct: 402 INKLERMTNEGYDDVEFFISTNV 424
>gi|120402439|ref|YP_952268.1| hypothetical protein Mvan_1428 [Mycobacterium vanbaalenii PYR-1]
gi|119955257|gb|ABM12262.1| band 7 protein [Mycobacterium vanbaalenii PYR-1]
Length = 477
Score = 34.9 bits (78), Expect = 4.3, Method: Composition-based stats.
Identities = 34/124 (27%), Positives = 57/124 (45%), Gaps = 13/124 (10%)
Query: 2 AELETAQAEADAKIAEAKAKDSG--NQAEIDIARSNAKDKTDLVRIAEAKYKYRSDIVMA 59
A + TA+AE DA+I AKA+ +G QAE D A + A K D V +A + + ++ A
Sbjct: 200 AAVGTAEAERDAQIQSAKARQAGAVAQAEADTAIATANQKRD-VELARLRAQTEAENAQA 258
Query: 60 ----------IEKSKADAIKTMEDRKAKVGVARQERKANESKDAATIITTATVENTKVVE 109
+K AI+ E + + + ++R+A +S+ A A E + +
Sbjct: 259 DQAGPLANARAQKDVGIAIEQAEAARVQARIEVEQRRAEQSQAALQADVIAPAEAQRAAD 318
Query: 110 TKEA 113
A
Sbjct: 319 IARA 322
>gi|237745213|ref|ZP_04575694.1| DNA repair protein recN [Fusobacterium sp. 7_1]
gi|229432442|gb|EEO42654.1| DNA repair protein recN [Fusobacterium sp. 7_1]
Length = 558
Score = 34.9 bits (78), Expect = 4.3, Method: Composition-based stats.
Identities = 23/83 (27%), Positives = 40/83 (48%), Gaps = 2/83 (2%)
Query: 22 DSGNQAEIDIARSNAKDKTDLVRIAEAKYKYRSDIVMAIEKSKADAIK--TMEDRKAKVG 79
DSG+ ++ + AK K++ ++AE R +I + IE + +K MED K KV
Sbjct: 342 DSGDFKTRELKQELAKIKSEYDKLAEKLSNLRKEIAVKIENELLNELKFLNMEDAKLKVQ 401
Query: 80 VARQERKANESKDAATIITTATV 102
+ + E+ N+ D + V
Sbjct: 402 INKIEKMTNDGYDEVEFFISTNV 424
>gi|254302670|ref|ZP_04970028.1| DNA repair protein RecN [Fusobacterium nucleatum subsp. polymorphum
ATCC 10953]
gi|148322862|gb|EDK88112.1| DNA repair protein RecN [Fusobacterium nucleatum subsp. polymorphum
ATCC 10953]
Length = 553
Score = 34.9 bits (78), Expect = 4.3, Method: Composition-based stats.
Identities = 24/83 (28%), Positives = 39/83 (46%), Gaps = 2/83 (2%)
Query: 22 DSGNQAEIDIARSNAKDKTDLVRIAEAKYKYRSDIVMAIEKSKADAIK--TMEDRKAKVG 79
DSG+ ++ + K KT+ +IAE R +I + IE + +K MED K KV
Sbjct: 337 DSGDFKTKELKKELNKIKTEYDKIAEKLTNSRKEIAVKIENELLNELKFLNMEDAKLKVQ 396
Query: 80 VARQERKANESKDAATIITTATV 102
+ + E+ N+ D + V
Sbjct: 397 INKLEKMTNDGYDEVEFFISTNV 419
>gi|67470334|ref|XP_651135.1| hypothetical protein [Entamoeba histolytica HM-1:IMSS]
gi|56467830|gb|EAL45749.1| hypothetical protein, conserved [Entamoeba histolytica HM-1:IMSS]
Length = 2089
Score = 34.5 bits (77), Expect = 4.4, Method: Composition-based stats.
Identities = 26/86 (30%), Positives = 53/86 (61%), Gaps = 7/86 (8%)
Query: 34 SNAKDKTD-LVRIAEAKYKYRSDI---VMAIEKSKADAIKTMEDRKAKVGVARQ--ERKA 87
+N+++KT +I+E K K + V ++K D+ +T++++K K G+A++ +K
Sbjct: 616 NNSENKTQKTTQISETKKKINHSVKKKVSELKKENKDS-QTIQEKKTKEGIAKKIHLKKV 674
Query: 88 NESKDAATIITTATVENTKVVETKEA 113
N+ K+ I+ + ++ TK++ETKEA
Sbjct: 675 NQQKEIDQPISESEIKPTKLLETKEA 700
>gi|149001800|ref|ZP_01826773.1| hypothetical protein CGSSp14BS69_08730 [Streptococcus pneumoniae
SP14-BS69]
gi|237650847|ref|ZP_04525099.1| hypothetical protein SpneC1_09049 [Streptococcus pneumoniae CCRI
1974]
gi|237821338|ref|ZP_04597183.1| hypothetical protein SpneC19_03302 [Streptococcus pneumoniae CCRI
1974M2]
gi|147760258|gb|EDK67247.1| hypothetical protein CGSSp14BS69_08730 [Streptococcus pneumoniae
SP14-BS69]
Length = 450
Score = 34.5 bits (77), Expect = 4.6, Method: Composition-based stats.
Identities = 24/88 (27%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Query: 2 AELETAQAEADAKIAEAKAKDSGNQAEIDIARSNAKDKTDLVRIAEAK-YKYRSDIVMAI 60
A+LET E KI K + +EID +SN KD ++ Y + +V +
Sbjct: 217 AKLETKILEITTKIEALKTNITSKNSEIDSQQSNIKDMNRTYNDPTSQAYNIYAQLVSEL 276
Query: 61 EKSKADAIKTMEDRKAKVGVARQERKAN 88
++++ K++ + +A +GVA + KA+
Sbjct: 277 GTARSNNNKSITELEANLGVATGQDKAH 304
>gi|148988834|ref|ZP_01820249.1| choline binding protein A [Streptococcus pneumoniae SP6-BS73]
gi|147925645|gb|EDK76721.1| choline binding protein A [Streptococcus pneumoniae SP6-BS73]
Length = 1008
Score = 34.5 bits (77), Expect = 4.7, Method: Composition-based stats.
Identities = 37/133 (27%), Positives = 66/133 (49%), Gaps = 17/133 (12%)
Query: 3 ELETAQAEADAKIAE-----AKAKDSGNQAEIDIARSNAKDK----TDLVRIA----EAK 49
ELE A+++ + K AE KAK+S ++ +I A + + K T L +I EAK
Sbjct: 179 ELEIAESDVEVKKAELELVKVKAKESQDEEKIKQAEAEVESKQAEATRLKKIKTDREEAK 238
Query: 50 YKYRSDIVMAIEKSKADAIKTMEDRKAKVGV----ARQERKANESKDAATIITTATVENT 105
K + + A+EK+ A + + R+AK GV A ++K N++K + + + T+ +
Sbjct: 239 RKADAKLKEAVEKNVATSEQDKPKRRAKRGVSGELATPDKKENDAKSSDSSVGEETLPSP 298
Query: 106 KVVETKEAGKTAR 118
+ E+ R
Sbjct: 299 SLNMANESQTEHR 311
>gi|67516849|ref|XP_658310.1| hypothetical protein AN0706.2 [Aspergillus nidulans FGSC A4]
gi|40746326|gb|EAA65482.1| hypothetical protein AN0706.2 [Aspergillus nidulans FGSC A4]
gi|259489020|tpe|CBF88948.1| TPA: hypothetical protein similar to UsoAp (Eurofung) [Aspergillus
nidulans FGSC A4]
Length = 1041
Score = 34.5 bits (77), Expect = 4.7, Method: Composition-based stats.
Identities = 32/128 (25%), Positives = 62/128 (48%), Gaps = 12/128 (9%)
Query: 2 AELETAQAEADAKIAEAKAKDSGNQAEIDIARSNAKDKTDLVRIAEAKYKYRSDIVMAIE 61
+E+E+ + + ++++ K G Q+E+D AR + ++++V++ A R+++ E
Sbjct: 866 SEVESTKEQRANEVSDLHKKIQGLQSELDSARK--QHESEVVKLESANETVRAELNTVKE 923
Query: 62 KSKADAIKTMEDRKAKVGV----ARQ-----ERKANESKDAATIITTATVENTKVV-ETK 111
+S D ED +K A+Q ER E++ AA + A K + ETK
Sbjct: 924 QSTQDLEAVREDYSSKCSALENRAQQAESEVERLEAEARKAAHALEEAQKALEKALQETK 983
Query: 112 EAGKTARS 119
E + +S
Sbjct: 984 EKEEARQS 991
>gi|158520035|ref|YP_001527905.1| hypothetical protein Dole_0018 [Desulfococcus oleovorans Hxd3]
gi|254799454|sp|A8ZRR1|Y018_DESOH RecName: Full=UPF0365 protein Dole_0018
gi|158508861|gb|ABW65828.1| protein of unknown function DUF1432 [Desulfococcus oleovorans Hxd3]
Length = 326
Score = 34.5 bits (77), Expect = 4.7, Method: Composition-based stats.
Identities = 23/61 (37%), Positives = 33/61 (54%)
Query: 2 AELETAQAEADAKIAEAKAKDSGNQAEIDIARSNAKDKTDLVRIAEAKYKYRSDIVMAIE 61
AELET +AEAD KIA+AKA++ A A+ + ++ EA+ K + A E
Sbjct: 231 AELETDRAEADKKIAQAKAEERRAMAYAREQEMKAQVEEMRAKVVEAEAKIPLAMANAFE 290
Query: 62 K 62
K
Sbjct: 291 K 291
>gi|166366427|ref|YP_001658700.1| hypothetical protein MAE_36860 [Microcystis aeruginosa NIES-843]
gi|166088800|dbj|BAG03508.1| hypothetical protein MAE_36860 [Microcystis aeruginosa NIES-843]
Length = 427
Score = 34.5 bits (77), Expect = 4.8, Method: Composition-based stats.
Identities = 23/89 (25%), Positives = 46/89 (51%), Gaps = 14/89 (15%)
Query: 3 ELETAQAEADAKIAEAKAKDSGNQAEI------DIARSNAKDKTDLVRIAEAKYKYRSDI 56
+LE A+A+A+ ++ + + K AE+ D+A+ A+ RI + K + ++D+
Sbjct: 236 DLEIAKADAEKRVRDTQTKRGAMIAEVESVVMSDLAKVQAEVAVQNARIKQVKQQLQADV 295
Query: 57 V--------MAIEKSKADAIKTMEDRKAK 77
+ AI K++ +A K +E KA+
Sbjct: 296 IAPAAAECQQAIAKARGEAAKIIEQGKAQ 324
Score = 34.1 bits (76), Expect = 5.7, Method: Composition-based stats.
Identities = 30/108 (27%), Positives = 50/108 (46%), Gaps = 16/108 (14%)
Query: 5 ETAQAEADAKIAEAKAKDSGNQAEIDIARSNAKDKTDLVRIAEAKYKYRSDIVMAIEKSK 64
+ A+ + DA+IAEAKA+ + S KD +L A + I +E +K
Sbjct: 198 QKAELQRDARIAEAKARKT----------SIIKDSENLRLTALRR------IQKDLEIAK 241
Query: 65 ADAIKTMEDRKAKVGVARQERKANESKDAATIITTATVENTKVVETKE 112
ADA K + D + K G E ++ D A + V+N ++ + K+
Sbjct: 242 ADAEKRVRDTQTKRGAMIAEVESVVMSDLAKVQAEVAVQNARIKQVKQ 289
>gi|315150240|gb|EFT94256.1| LPXTG-motif protein cell wall anchor domain protein [Enterococcus
faecalis TX0012]
Length = 711
Score = 34.5 bits (77), Expect = 5.0, Method: Composition-based stats.
Identities = 24/85 (28%), Positives = 42/85 (49%), Gaps = 4/85 (4%)
Query: 25 NQAEIDIARSNAKDKTDLVRIAEAKYKYRSDIVMAIEKSKADAIKTMEDRKAKVGVARQE 84
N AE+ + + N + + + +I E D +M K+K + I T +R+ +V + +
Sbjct: 564 NGAEVALPKFNNRGEDFVYQIEEVNVPAEFDSIMT--KTKDEFILT--NRRKEVVSSTTD 619
Query: 85 RKANESKDAATIITTATVENTKVVE 109
NES + T T ++ E T VVE
Sbjct: 620 TSTNESLSSETATTNSSAEKTIVVE 644
>gi|325478751|gb|EGC81862.1| RecF/RecN/SMC N-terminal domain protein [Anaerococcus prevotii
ACS-065-V-Col13]
Length = 1144
Score = 34.5 bits (77), Expect = 5.2, Method: Composition-based stats.
Identities = 36/113 (31%), Positives = 56/113 (49%), Gaps = 12/113 (10%)
Query: 4 LETAQAEADAKIAEAKA-KDSGNQAEIDIARSNAKDKTDLVRIAEAKYKYRSDIVMAIEK 62
LE E A+IA+ K + Q +I I+ + + + DLV+I+E Y+Y + +K
Sbjct: 321 LEEKLDEIKAQIADNKELSNKLEQDKIAISDNKKRVEVDLVKISEEIYQYEIN-----QK 375
Query: 63 SKADAIKTMEDRKAKVGVARQERKANESKDAAT--IITTATVENTKVVETKEA 113
SKA ++ RKAK R E+ N SK+ I + +E K +E K A
Sbjct: 376 SKA----ILDKRKAKEDEIRIEKLNNLSKEIEKLEIDRDSLIEEIKTLEEKNA 424
>gi|257415126|ref|ZP_05592120.1| predicted protein [Enterococcus faecalis AR01/DG]
gi|257156954|gb|EEU86914.1| predicted protein [Enterococcus faecalis ARO1/DG]
Length = 711
Score = 34.5 bits (77), Expect = 5.5, Method: Composition-based stats.
Identities = 24/85 (28%), Positives = 42/85 (49%), Gaps = 4/85 (4%)
Query: 25 NQAEIDIARSNAKDKTDLVRIAEAKYKYRSDIVMAIEKSKADAIKTMEDRKAKVGVARQE 84
N AE+ + + N + + + +I E D +M K+K + I T +R+ +V + +
Sbjct: 564 NGAEVALPKFNNRGEDFVYQIEEVNVPAEFDSIMT--KTKDEFILT--NRRKEVVSSTTD 619
Query: 85 RKANESKDAATIITTATVENTKVVE 109
NES + T T ++ E T VVE
Sbjct: 620 TSTNESLSSETATTNSSAEKTIVVE 644
>gi|17556907|ref|NP_498856.1| UBX-containing protein in Nematode family member (ubxn-4)
[Caenorhabditis elegans]
gi|466104|sp|P34631|UBXN4_CAEEL RecName: Full=UBX domain-containing protein 4
gi|289758|gb|AAA28196.1| Ubx-containing protein in nematodes protein 4, confirmed by
transcript evidence [Caenorhabditis elegans]
Length = 469
Score = 34.1 bits (76), Expect = 5.9, Method: Composition-based stats.
Identities = 29/118 (24%), Positives = 53/118 (44%), Gaps = 6/118 (5%)
Query: 3 ELETAQAEADAKIAEAKAKDSGNQAEIDIARSNAKDKTDLVRIAEAKYKYRSD-IVMAIE 61
EL A A A + + K KD+ + E D K ++ + EAK + ++ +V A +
Sbjct: 168 ELAEKVARAKALLEQKKQKDAEKKREAD-----KHVKEEMTKAREAKQERDAEALVKAAK 222
Query: 62 KSKADAIKTMEDRKAKVGVARQERKANESKDAATIITTATVENTKVVETKEAGKTARS 119
+ K + + D+K + + +R+A + K + T ENT+ + GK S
Sbjct: 223 QRKMEKLAAESDKKRILAQIKADREAAQKKFGKLVNTENASENTEKKQETTVGKAVPS 280
>gi|297570639|ref|YP_003696413.1| Exo-alpha-sialidase [Arcanobacterium haemolyticum DSM 20595]
gi|296930986|gb|ADH91794.1| Exo-alpha-sialidase [Arcanobacterium haemolyticum DSM 20595]
Length = 885
Score = 34.1 bits (76), Expect = 5.9, Method: Composition-based stats.
Identities = 33/112 (29%), Positives = 54/112 (48%), Gaps = 6/112 (5%)
Query: 2 AELETAQAEADAKIAEAKAKDSGNQAEIDIARSNAKDKTDLVRIAEAKYKYRSDIVMAIE 61
A+ ET +AE K K DS N A++++A++ + + + EAK A E
Sbjct: 544 ADSETTRAE---KARLQKEFDSIN-AKLEVAKAEKQRVASDLAVKEAKLTESEKQKAAAE 599
Query: 62 KSKADAIKTMEDRKAKVGVARQERKANESKDAATIITTATVENTKVVETKEA 113
K A+ K +ED AKV A ER +++ ++A + E+ K +E E
Sbjct: 600 KKVAEQHKQIEDLNAKVKKAESER--DQATESAKNLEEKAKEDAKSIEGLEG 649
>gi|49481625|ref|YP_038596.1| cell surface protein [Bacillus thuringiensis serovar konkukian str.
97-27]
gi|49333181|gb|AAT63827.1| conserved hypothetical protein, possible cell surface protein
[Bacillus thuringiensis serovar konkukian str. 97-27]
Length = 953
Score = 34.1 bits (76), Expect = 6.0, Method: Composition-based stats.
Identities = 29/111 (26%), Positives = 48/111 (43%), Gaps = 17/111 (15%)
Query: 11 ADAKIAEAKAKDSGNQAEIDI----ARSNAKDKTDLVRIAEAKYKYRSDIVMAIEKSKAD 66
ADAK+ K + + ++ A+ NAK K D I E Y + D+ + + +K
Sbjct: 806 ADAKVVSEDKKANTRVVQFEVSDLFAKLNAKVKVD---IDEMNYHHFYDVQIQFDTTKIG 862
Query: 67 AIKTMEDRKAKVGVARQERKANESKDAATIITTATVENTKVVETKEAGKTA 117
A VG ++E K + + +TT V+N K V T + + A
Sbjct: 863 A----------VGTVKEEPKNDPKNEPKNPVTTPKVDNVKTVGTPDFNRNA 903
>gi|167574255|ref|ZP_02367129.1| gp14 [Burkholderia oklahomensis C6786]
Length = 1354
Score = 34.1 bits (76), Expect = 6.9, Method: Composition-based stats.
Identities = 26/80 (32%), Positives = 43/80 (53%), Gaps = 7/80 (8%)
Query: 12 DAKIAEAKAKDSGNQAEIDIARSNAKDKTDL-VRIAEAKYKYRSDIVMAIEKSKADAIKT 70
+AK+AEA+A ++ QA + ARSN + ++ RIA Y I + A A +
Sbjct: 401 EAKLAEARAVEASAQAHVATARSNLANSQEIGTRIAGLPY------AAIIARETAAAQQE 454
Query: 71 MEDRKAKVGVARQERKANES 90
+E +A + +A+Q R A E+
Sbjct: 455 LERAEASLALAQQRRTALEA 474
>gi|288555735|ref|YP_003427670.1| hypothetical protein BpOF4_13635 [Bacillus pseudofirmus OF4]
gi|288546895|gb|ADC50778.1| hypothetical protein BpOF4_13635 [Bacillus pseudofirmus OF4]
Length = 334
Score = 34.1 bits (76), Expect = 7.2, Method: Composition-based stats.
Identities = 27/98 (27%), Positives = 44/98 (44%), Gaps = 8/98 (8%)
Query: 2 AELETAQAEADAKIAEAKAKDSGNQAEIDIARSNAKDKTDLVRIAEAKYKYRSDIVMAIE 61
AEL+T QAEAD KIA+AKA++ A A+ + ++ EA+ + + A+
Sbjct: 235 AELQTDQAEADKKIAQAKAEERRAMAVAQEQEMKARVEEMRAKVVEAEAEVPMALSDALR 294
Query: 62 KSKADAIKTME--------DRKAKVGVARQERKANESK 91
K + M D + + A E +NE +
Sbjct: 295 KGNMGVMDYMNYQNVMADTDMRGSISKATGEDDSNEKR 332
>gi|8163699|gb|AAF73809.1|AF154037_1 surface protein PspC [Streptococcus pneumoniae]
Length = 929
Score = 33.7 bits (75), Expect = 7.6, Method: Composition-based stats.
Identities = 37/133 (27%), Positives = 66/133 (49%), Gaps = 17/133 (12%)
Query: 3 ELETAQAEADAKIAE-----AKAKDSGNQAEIDIARSNAKDK----TDLVRIA----EAK 49
ELE A+++ + K AE KAK+S ++ +I A + + K T L +I EAK
Sbjct: 179 ELEIAESDVEVKKAELELVKVKAKESQDEEKIKQAEAEVESKQAEATRLKKIKTDREEAK 238
Query: 50 YKYRSDIVMAIEKSKADAIKTMEDRKAKVGV----ARQERKANESKDAATIITTATVENT 105
K + + A+EK+ A + + R+AK GV A ++K N++K + + + T+ +
Sbjct: 239 RKADAKLKEAVEKNVATSEQDKPKRRAKRGVSGELATPDKKENDAKSSDSSVGEETLPSP 298
Query: 106 KVVETKEAGKTAR 118
+ E+ R
Sbjct: 299 SLNMANESQTEHR 311
>gi|77864693|ref|YP_355403.1| gp68 [Burkholderia phage Bcep176]
gi|161520424|ref|YP_001583851.1| phage tape measure protein [Burkholderia multivorans ATCC 17616]
gi|189353385|ref|YP_001949012.1| bacteriophage tape measure protein [Burkholderia multivorans ATCC
17616]
gi|76885879|gb|ABA60069.1| gp68 [Burkholderia phage Bcep176]
gi|160344474|gb|ABX17559.1| phage tape measure protein [Burkholderia multivorans ATCC 17616]
gi|189337407|dbj|BAG46476.1| bacteriophage tape measure protein [Burkholderia multivorans ATCC
17616]
Length = 1380
Score = 33.7 bits (75), Expect = 8.4, Method: Composition-based stats.
Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 7/87 (8%)
Query: 12 DAKIAEAKAKDSGNQAEIDIARSNAKDKTDL-VRIAEAKYKYRSDIVMAIEKSKADAIKT 70
DAK+AEA+A ++ A++ ARSN + ++ RIA Y I + A A
Sbjct: 401 DAKLAEARAIEASAVAQVATARSNLANSQEIGTRIAGTPY------AAVIARETAAAQGE 454
Query: 71 MEDRKAKVGVARQERKANESKDAATII 97
+E +A + +A+Q R A E+ A I
Sbjct: 455 LERAEASLALAQQRRVALEAAAAKGTI 481
>gi|167566450|ref|ZP_02359366.1| gp14 [Burkholderia oklahomensis EO147]
Length = 1354
Score = 33.7 bits (75), Expect = 8.5, Method: Composition-based stats.
Identities = 26/81 (32%), Positives = 44/81 (54%), Gaps = 7/81 (8%)
Query: 11 ADAKIAEAKAKDSGNQAEIDIARSNAKDKTDL-VRIAEAKYKYRSDIVMAIEKSKADAIK 69
++AK+AEA+A ++ QA + ARSN + ++ RIA Y I + A A +
Sbjct: 400 SEAKLAEARAVEASAQAHVATARSNLANSQEIGTRIAGLPY------AAIIARETAAAQQ 453
Query: 70 TMEDRKAKVGVARQERKANES 90
+E +A + +A+Q R A E+
Sbjct: 454 ELERAEASLALAQQRRTALEA 474
>gi|312144008|ref|YP_003995454.1| hypothetical protein Halsa_1677 [Halanaerobium sp. 'sapolanicus']
gi|311904659|gb|ADQ15100.1| hypothetical protein Halsa_1677 [Halanaerobium sp. 'sapolanicus']
Length = 327
Score = 33.7 bits (75), Expect = 8.7, Method: Composition-based stats.
Identities = 24/95 (25%), Positives = 45/95 (47%), Gaps = 6/95 (6%)
Query: 2 AELETAQAEADAKIAEAKAKDSGNQAEIDIARSNAKDKTDLVRIAEAKYKYRSDIVMAIE 61
A+L+T QAEAD +IA+AKA++ A + A+ + ++ EA+ + + A++
Sbjct: 230 AQLQTDQAEADKEIAQAKAEERRAMAVAEEQEMKARVQEMRAKVVEAEAQVPLAMAEALK 289
Query: 62 KSKADAIKTM------EDRKAKVGVARQERKANES 90
+ M D K + ++ K NE+
Sbjct: 290 NGNLGVMDYMNLKNIESDTKMRSSISESSEKNNEN 324
>gi|319651603|ref|ZP_08005730.1| hypothetical protein HMPREF1013_02342 [Bacillus sp. 2_A_57_CT2]
gi|317396670|gb|EFV77381.1| hypothetical protein HMPREF1013_02342 [Bacillus sp. 2_A_57_CT2]
Length = 332
Score = 33.7 bits (75), Expect = 8.9, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 28/48 (58%)
Query: 2 AELETAQAEADAKIAEAKAKDSGNQAEIDIARSNAKDKTDLVRIAEAK 49
AEL+T QAEAD KIA+AKA++ A A+ + ++ EA+
Sbjct: 234 AELQTEQAEADKKIAQAKAEERRAMAVAQEQEMKARVEEMRAKVVEAE 281
>gi|4097980|gb|AAD00184.1| surface protein C [Streptococcus pneumoniae]
Length = 929
Score = 33.7 bits (75), Expect = 9.0, Method: Composition-based stats.
Identities = 37/133 (27%), Positives = 66/133 (49%), Gaps = 17/133 (12%)
Query: 3 ELETAQAEADAKIAE-----AKAKDSGNQAEIDIARSNAKDK----TDLVRIA----EAK 49
ELE A+++ + K AE KAK+S ++ +I A + + K T L +I EAK
Sbjct: 179 ELEIAESDVEVKKAELELVKVKAKESQDEEKIKQAEAEVESKQAEATRLKKIKTDREEAK 238
Query: 50 YKYRSDIVMAIEKSKADAIKTMEDRKAKVGV----ARQERKANESKDAATIITTATVENT 105
K + + A+EK+ A + + R+AK GV A ++K N++K + + + T+ +
Sbjct: 239 RKADAKLKEAVEKNVATSEQDKPKRRAKRGVSGELATPDKKENDAKSSDSSVGEETLPSP 298
Query: 106 KVVETKEAGKTAR 118
+ E+ R
Sbjct: 299 SLNMANESQTEHR 311
>gi|260584545|ref|ZP_05852291.1| YSIRK type signal peptide [Granulicatella elegans ATCC 700633]
gi|260157568|gb|EEW92638.1| YSIRK type signal peptide [Granulicatella elegans ATCC 700633]
Length = 2668
Score = 33.7 bits (75), Expect = 9.6, Method: Composition-based stats.
Identities = 33/118 (27%), Positives = 53/118 (44%), Gaps = 21/118 (17%)
Query: 6 TAQAEADAKIAEAKAKDSGNQAEIDIARSNAKDKTDLVRIAEAKYKYRSDIVMAIEKSKA 65
TA+ A+ K+ AK + + +AE+D A++ D EAK K D +A EK+
Sbjct: 991 TAEDLAEKKLKSAKEQQASLKAELDKAKAALPD-------VEAKVKSARDEALAAEKA-- 1041
Query: 66 DAIKTMEDRKAKVGVARQERKANESKDAATI-------ITTATVENTKVVETKEAGKT 116
+E + + A ++ AN A T+ +T V++ VV T GKT
Sbjct: 1042 -----VETAREALKTAAEKNLANPEIAAYTLGEYGSYKVTVRAVDSNGVVTTPTVGKT 1094
>gi|311029291|ref|ZP_07707381.1| flotillin-like protein [Bacillus sp. m3-13]
Length = 511
Score = 33.3 bits (74), Expect = 9.9, Method: Composition-based stats.
Identities = 26/84 (30%), Positives = 49/84 (58%), Gaps = 7/84 (8%)
Query: 2 AELETAQAEADAKIAEAKAKDSGNQAEIDIARSNAK-DKTDLVRIAEAKYKYRSDIVMAI 60
A++ TA+A+ + +I A+A +AE++ A A+ +KT+ +++AE Y+ DI
Sbjct: 210 ADIATAEADKETRIKRAEAAKDAQRAELERATEIAEAEKTNQMKVAE--YRREQDIA--- 264
Query: 61 EKSKADAIKTMEDRKAKVGVARQE 84
K++AD +E+ +AK V Q+
Sbjct: 265 -KARADQAYHLEEARAKQEVTEQQ 287
Database: nr
Posted date: May 13, 2011 4:10 AM
Number of letters in database: 999,999,932
Number of sequences in database: 2,987,209
Database: /data/usr2/db/fasta/nr.01
Posted date: May 13, 2011 4:17 AM
Number of letters in database: 999,998,956
Number of sequences in database: 2,896,973
Database: /data/usr2/db/fasta/nr.02
Posted date: May 13, 2011 4:23 AM
Number of letters in database: 999,999,979
Number of sequences in database: 2,907,862
Database: /data/usr2/db/fasta/nr.03
Posted date: May 13, 2011 4:29 AM
Number of letters in database: 999,999,513
Number of sequences in database: 2,932,190
Database: /data/usr2/db/fasta/nr.04
Posted date: May 13, 2011 4:33 AM
Number of letters in database: 792,586,372
Number of sequences in database: 2,260,650
Lambda K H
0.302 0.116 0.279
Lambda K H
0.267 0.0363 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 616,853,644
Number of Sequences: 13984884
Number of extensions: 15906257
Number of successful extensions: 58323
Number of sequences better than 10.0: 688
Number of HSP's better than 10.0 without gapping: 76
Number of HSP's successfully gapped in prelim test: 612
Number of HSP's that attempted gapping in prelim test: 57242
Number of HSP's gapped (non-prelim): 1548
length of query: 119
length of database: 4,792,584,752
effective HSP length: 86
effective length of query: 33
effective length of database: 3,589,884,728
effective search space: 118466196024
effective search space used: 118466196024
T: 11
A: 40
X1: 16 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (21.9 bits)
S2: 75 (33.7 bits)