HHsearch alignment for GI: 254780177 and conserved domain: PRK05935
>PRK05935 biotin--protein ligase; Provisional.
Probab=97.96 E-value=0.00047 Score=46.94 Aligned_cols=127 Identities=17% Similarity=0.198 Sum_probs=81.4
Q ss_pred EEEC-CCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCEEHHE
Q ss_conf 8607-892477765121001203899999999999999886288532458872167416676665556564210100000
Q gi|254780177|r 94 TYHG-PGQRIIYIMLNLAKRRKDLRCFVAALEEVIIRTLKILGIVGERREDRVGIWVVRLNKTRDNQLLLIEEKIAAIGI 172 (257)
Q Consensus 94 TyHG-PGQlV~Ypii~L~~~~~~v~~yv~~lE~~ii~~l~~~gI~~~~~~~~~GVWV~~~~~~~~~~~~~~~~KIasIGi 172 (257)
T Consensus 48 ~W~S~~g~l~~S~~~~~~~~~~~~~~l~~l~~~av~~~~~~~~~~~~~I-----KWP--------NDIl~~~kKi~GIL~ 114 (190)
T PRK05935 48 SWHSSDKDLLASFCFFITVLDIDVSLLFRLGTEAVLRLGQDLGITEAVI-----KWP--------NDVLVHGEKLCGVLC 114 (190)
T ss_pred EEECCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCE-----ECC--------CHHCCCCCEEEEEEE
T ss_conf 6566999808999996487643878999999999999999846877434-----086--------650087915999978
Q ss_pred ECC----CCEEEEEEEEEECCCCHHHCCEEECCCCCCCCCCHH-HHCCCCCHHHHHHHHHHHHHHHHCHHHH
Q ss_conf 004----888998899995499135173410567978521289-9189889999999999999987461110
Q gi|254780177|r 173 RIR----KWISFHGLSLNISPDLSYYTGIVPCGISQHGVTSLK-ELGYSYSMKYIDTLIRKSFESVFGPTIL 239 (257)
Q Consensus 173 ~i~----~~vT~HG~alNv~~dL~~F~~IvPCGl~~~~vTSl~-~lg~~i~~~ev~~~l~~~f~~~Fg~~~~ 239 (257)
T Consensus 115 E~~~~~~~~~~iiGIGINvN~~~~~~~~i------~~~ATSL~~~~G~~vd~~~ll~~ll~~~e~~~~e~f~ 180 (190)
T PRK05935 115 ETIPVKGGLGVILGIGVNGNTTKDELLSI------DQPATSLQELLGHPIDLEEQRERLIKHIKHLIQENFL 180 (190)
T ss_pred EEECCCCCEEEEEEEEEECCCCCCCCCCC------CCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCH
T ss_conf 75115894699999998737882003367------9882229998789789999999999999999860880