HHsearch alignment for GI: 254780177 and conserved domain: pfam03099

>pfam03099 BPL_LplA_LipB Biotin/lipoate A/B protein ligase family. This family includes biotin protein ligase, lipoate-protein ligase A and B. Biotin is covalently attached at the active site of certain enzymes that transfer carbon dioxide from bicarbonate to organic acids to form cellular metabolites. Biotin protein ligase (BPL) is the enzyme responsible for attaching biotin to a specific lysine at the active site of biotin enzymes. Each organism probably has only one BPL. Biotin attachment is a two step reaction that results in the formation of an amide linkage between the carboxyl group of biotin and the epsilon-amino group of the modified lysine. Lipoate-protein ligase A (LPLA) catalyses the formation of an amide linkage between lipoic acid and a specific lysine residue in lipoate dependent enzymes. The unusual biosynthesis pathway of lipoic acid is mechanistically intertwined with attachment of the cofactor.
Probab=97.10  E-value=0.0045  Score=40.59  Aligned_cols=104  Identities=27%  Similarity=0.359  Sum_probs=61.5

Q ss_pred             CCCCCCEEEEECCCCEEEEECCCC-EEEEEEECCCCCC---CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCC
Q ss_conf             054782499805667078607892-4777651210012---038999999999999998862885324588721674166
Q gi|254780177|r   77 LSPKSLPVYTTGRGGGYTYHGPGQ-RIIYIMLNLAKRR---KDLRCFVAALEEVIIRTLKILGIVGERREDRVGIWVVRL  152 (257)
Q Consensus        77 l~~~~ipv~~t~RGG~iTyHGPGQ-lV~Ypii~L~~~~---~~v~~yv~~lE~~ii~~l~~~gI~~~~~~~~~GVWV~~~  152 (257)
T Consensus        17 ~~~g~v~va~~QT~Gr~~W~sp~g~l~~Si~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-------~~~~~~~~~~i-   88 (124)
T pfam03099        17 LEEGGVVVARRQTGGRRVWHSPGGNLAYSLLLLPELKSFKPSDLPAYVLLLVLAVLEALGP-------KAGIPGIWVRI-   88 (124)
T ss_pred             CCCCCEEEEEEECCCCCCEECCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHH-------HHCCCCCEEEE-
T ss_conf             7659899997746899721689998899999756556401778899999999999999998-------63136962765-


Q ss_pred             CCCCCCCCCCCCCCCEEHHEECCCCEEEEEEEEEECCC
Q ss_conf             76665556564210100000004888998899995499
Q gi|254780177|r  153 NKTRDNQLLLIEEKIAAIGIRIRKWISFHGLSLNISPD  190 (257)
Q Consensus       153 ~~~~~~~~~~~~~KIasIGi~i~~~vT~HG~alNv~~d  190 (257)
T Consensus        89 --KWPNDi~~~~kKi~GiL~e~~~~~~~~~~viGiGiN  124 (124)
T pfam03099        89 --KWPNDVLVNGKKIAGILQEIRRGGTLHHGTLGIGIN  124 (124)
T ss_pred             --CCCCCCEECCCEEEEEEEEECCCCCCCEEEEEEEEC
T ss_conf             --386532688908999987820489645799999619