HHsearch alignment of GI: 254780177 and MMDB domain: 1bia_A_65-271
>1bia_A (A:65-271) BIRA bifunctional protein; transcription regulation; 2.30A {Escherichia coli}
Probab=93.97 E-value=0.5 Score=26.86 Aligned_cols=127 Identities=11% Similarity=0.127 Sum_probs=76.7
Q ss_pred CCCCEEEEECCCCEE-EEEEECCCCCCCHHHHHHHHHHHHHHHHHHHC-CCCCCCC-CCCCEEEECCCCCCCCCCCCCCC
Q ss_conf 566707860789247-77651210012038999999999999998862-8853245-88721674166766655565642
Q gi|254780177|r 88 GRGGGYTYHGPGQRI-IYIMLNLAKRRKDLRCFVAALEEVIIRTLKIL-GIVGERR-EDRVGIWVVRLNKTRDNQLLLIE 164 (257)
Q Consensus 88 ~RGG~iTyHGPGQlV-~Ypii~L~~~~~~v~~yv~~lE~~ii~~l~~~-gI~~~~~-~~~~GVWV~~~~~~~~~~~~~~~ 164 (257)
+|.|..-+.-+|-+. ...++...........+.-..--++.++|.++ +++...+ |. .|++++
T Consensus 53 Gr~gr~W~Sp~g~~l~~sl~~~~~~~~~~~~~ls~~~~~av~~aL~~~~~~~~~iKWPN--DI~~~~------------- 117 (207)
T 1bia_A 53 GRRGRKWFSPFGANLYLSMFWRLEQGPAAAIGLSLVIGIVMAEVLRKLGADKVRVKWPN--DLYLQD------------- 117 (207)
T ss_dssp --------CCTTSEEEEEEEEEECC-CCCTHHHHHHHHHHHHHHHHHTTCTTCEEETTT--EEEETT-------------
T ss_pred CCCCCEEECCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECC--CHHCCC-------------
T ss_conf 79998308979997899976146778667533446678999999875315436788444--111034-------------
Q ss_pred CCCEEHHEECCC-----CEEEEEEEEEECCCCHHHCCEEECCCCCCCCCCHHH-HCCCCCHHHHHHHHHHHHHHHHCH
Q ss_conf 101000000048-----889988999954991351734105679785212899-189889999999999999987461
Q gi|254780177|r 165 EKIAAIGIRIRK-----WISFHGLSLNISPDLSYYTGIVPCGISQHGVTSLKE-LGYSYSMKYIDTLIRKSFESVFGP 236 (257)
Q Consensus 165 ~KIasIGi~i~~-----~vT~HG~alNv~~dL~~F~~IvPCGl~~~~vTSl~~-lg~~i~~~ev~~~l~~~f~~~Fg~ 236 (257)
+|||-|=+-... ..-.=|+-||++++-.+ -+ -....|||.+ .+..++.+++-..+.++|...+..
T Consensus 118 ~Ki~GIL~E~~~~~~~~~~~viGiGiNv~~~~~~------~~-~~~~atsL~~~~~~~~~~~~l~~~l~~~l~~~~~~ 188 (207)
T 1bia_A 118 RKLAGILVELTGKTGDAAQIVIGAGINMAMRRVE------ES-VVNQGWITLQEAGINLDRNTLAAMLIRELRAALEL 188 (207)
T ss_dssp EEEEEEEEEEEC----CEEEEEEEEEECCC------------------CCCTTTTTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEEEECCCCCCEEEEEEECCCCCCCCC------CH-HCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 4555236885311466320356530233467885------00-00021023344224444366677666778999999