HHsearch alignment of GI: 254780177 and MMDB domain: 2p0l_A_
>2p0l_A (A:) Lipoate-protein ligase A; PFAM, lopoate-protein ligase A, structural genomics, protein structure initiative, PSI-2; 2.04A {Streptococcus agalactiae COH1}
Probab=100.00 E-value=9e-35 Score=245.88 Aligned_cols=227 Identities=13% Similarity=0.032 Sum_probs=198.5
Q ss_pred HHCCCCCCCCCEEEEE-ECCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCEEEECCCCCHHH-------HCCCCCC
Q ss_conf 1003557897238998-0888588999999999999997399787899980687377434788556-------1054782
Q gi|254780177|r 11 TSMFPMENISPIRWWV-MDNPVDYEESQIIMEREIQRISLGNAEELVWLLEHPPLYTSGTSAISDD-------LLSPKSL 82 (257)
Q Consensus 11 ~~~~p~~~~~~ie~~~-~~G~v~Y~~al~~q~~~~~~v~~~~~~d~l~llEH~pVyT~G~~~~~~d-------ll~~~~i 82 (257)
.|.-.++.++...|++ ..|..||...+++++.+.+.+.+++.+++|++.||+|++|+|++.+.++ .+...++
T Consensus 3 ~~~~~~~~~~~~~~~~i~~~~~~~~~~la~d~~ll~~~~~~~~~~~l~~~~~~p~v~lG~~q~~~~~~~~~~~~~~~~gi 82 (288)
T 2p0l_A 3 LEWQDLAQLPVSIFKDYVTDAQDAEKPFIWTEVFLREINRSNQEIILHIWPXTKTVILGXLDRELPHLELAKKEIISRGY 82 (288)
T ss_dssp -CGGGGTTSCEEEEECCBCSGGGTTHHHHHHHHHHHHHHHSCSCEEEEECCBSSEEEECTTGGGCTTHHHHHHHHHTTTC
T ss_pred CCHHHHHCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCEEEECCCCCCCCHHHHHHHHHHHCCC
T ss_conf 53776743857888544687546546668999999985157899789996389989989876768119999999998699
Q ss_pred EEEEECCCCEEEEECCCCEEEEEEECCCC-CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCC
Q ss_conf 49980566707860789247776512100-12038999999999999998862885324588721674166766655565
Q gi|254780177|r 83 PVYTTGRGGGYTYHGPGQRIIYIMLNLAK-RRKDLRCFVAALEEVIIRTLKILGIVGERREDRVGIWVVRLNKTRDNQLL 161 (257)
Q Consensus 83 pv~~t~RGG~iTyHGPGQlV~Ypii~L~~-~~~~v~~yv~~lE~~ii~~l~~~gI~~~~~~~~~GVWV~~~~~~~~~~~~ 161 (257)
||++..+||++|||+|||++.|+|++... .+.+++.++..++++++++|+.+|+++...+...|+|+.+++ ..
T Consensus 83 ~vvrR~tGGgaV~hd~G~l~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~L~~lGi~a~~~~~~~~~~~~~~d------i~ 156 (288)
T 2p0l_A 83 EPVVRNFGGLAVVADEGILNFSLVIPDVFERKLSISDGYLIXVDFIRSIFSDFYQPIEHFEVETSYCPGKFD------LS 156 (288)
T ss_dssp EEEECTTCCSCEEESTTEEEEEEEEESCC---CCHHHHHHHHHHHHHHHTTTSCSCCEECCCTTSSSCCTTC------EE
T ss_pred CEEEECCCCCEEEECCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCC------EE
T ss_conf 489964898648977995699999626654678989999999999999999719751773255665788665------78
Q ss_pred CCCCCCEEHHEECCCCEEEEEEEEEECCCCHH----HCCEEECCCCCCCC------------CCHHH-HCCCCCHHHHHH
Q ss_conf 64210100000004888998899995499135----17341056797852------------12899-189889999999
Q gi|254780177|r 162 LIEEKIAAIGIRIRKWISFHGLSLNISPDLSY----YTGIVPCGISQHGV------------TSLKE-LGYSYSMKYIDT 224 (257)
Q Consensus 162 ~~~~KIasIGi~i~~~vT~HG~alNv~~dL~~----F~~IvPCGl~~~~v------------TSl~~-lg~~i~~~ev~~ 224 (257)
...+||+++|.++++++++||.+||+++|++. |+.|.||++.++.+ ||+.+ ++.+++++++.+
T Consensus 157 ~~g~KI~G~aq~~~~~~~l~~gsl~~~~d~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~ 236 (288)
T 2p0l_A 157 INGKKFAGLAQRRIKNGIAVSIYLSVCGDQKGRSQXISDFYKIGLGDTGSPIAYPNVDPEIXANLSDLLDCPXTVEDVID 236 (288)
T ss_dssp ETTEEEEEEEEEEETTEEEEEEEEECSSCHHHHHHHHHHHHHHHHTTTCCSSCCCCCCTTSBCCHHHHTTCCCCHHHHHH
T ss_pred ECCEEEEEEEEEEECCEEEEEEEEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHEEHHHHCCCCCCHHHHHH
T ss_conf 88887899899983893999999999788789889998877640254455434677555552219997399999999999
Q ss_pred HHHHHHHHHHCHHHHCHHH
Q ss_conf 9999999874611102331
Q gi|254780177|r 225 LIRKSFESVFGPTILHEYA 243 (257)
Q Consensus 225 ~l~~~f~~~Fg~~~~~~~~ 243 (257)
.+.+.|.+.|+.....+++
T Consensus 237 ~l~~~~~~~~~~~~~~~l~ 255 (288)
T 2p0l_A 237 RXLISLKQVGFNDRLLXIR 255 (288)
T ss_dssp HHHHHHHHHTCCEEECCCC
T ss_pred HHHHHHHHHCCCCCCCCCC
T ss_conf 9999999865877622069