HHsearch alignment for GI: 254780178 and conserved domain: TIGR00449
>TIGR00449 tgt_general tRNA-guanine transglycosylases, various specificities; InterPro: IPR002616 queuosine at position 34 in bacterial tRNAs and This is a family of queuine, archaeosine and general tRNA-ribosyltransferases 2.4.2.29 from EC, also known as tRNA-guanine transglycosylase and guanine insertion enzyme. Queuine tRNA-ribosyltransferase modifies tRNAs for asparagine, aspartic acid, histidine and tyrosine with queuine at position 34 and with archaeosine at position 15 in archaeal tRNAs. In bacterial it catalyses the exchange of guanine-34 at the wobble position with 7-aminomethyl-7-deazaguanine, and the addition of a cyclopentenediol moiety to 7-aminomethyl-7-deazaguanine-34 tRNA; giving a hypermodified base queuine in the wobble position , . The aligned region contains a zinc binding motif C-x-C-x2-C-x29-H, and important tRNA and 7-aminomethyl-7deazaguanine binding residues .; GO: 0008479 queuine tRNA-ribosyltransferase activity, 0006400 tRNA modification, 0008616 queuosine biosynthetic process.
Probab=100.00 E-value=0 Score=538.68 Aligned_cols=364 Identities=49% Similarity=0.847 Sum_probs=356.5
Q ss_pred EEEEEECCC--CEEEEEEECCEEEECCCEEECCCCCCCCCCCHHHHHHCCCCEEEEEHHHHHHCCCHHHHHHCCCCHHHC
Q ss_conf 999976499--327999878875405857410686856886889998609989993226657387689986527420110
Q gi|254780178|r 7 FNLKAVSGS--ARLGEIITPRGVIKTPAFMPVGTAGTVKAMYFDQVRDLGADVILGNAYHLMLRPGAERIARLGGLHKFI 84 (378)
Q Consensus 7 F~i~~~~~~--aR~G~L~t~~g~i~TP~flpv~t~g~v~~lt~~~l~~~g~~~il~Ntyhl~~~pg~~~i~~~gGlh~fl 84 (378)
T Consensus 1 ~~~~~~~~~~~~~~g~~~~~~g~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~~~~~g~~~~~ 80 (375)
T TIGR00449 1 FELLKTDGHFGARVGLLKTPHGSVETPVFLPVGTLGTVKGLDPEDLKDLGAELVLANTYHLYLRPGEKLVALLGGLHKFL 80 (375)
T ss_pred CCCCCCCCCCCCCEEEEECCCCCCCCCEEEECCCCHHHCCCCHHHHHHHCCCEEEECEEEEEECCCHHHHHHHCCHHHHH
T ss_conf 95311012222210134326665234200001220000135445664301101110001021044157888631034554
Q ss_pred CCCCCEEECCCCCCCCHHH-HCCCCCCCCEEEECCCCCCEEEECHHHHHHHHHHCCCCEEEEEHHHCCCCCCHHHHHHHH
Q ss_conf 1577224114543210122-102233331021014454158712999999987328977996012133221158999999
Q gi|254780178|r 85 RWFKPILTDSGGFQVMSLS-KLCSIDEQGVRFRSHIDGSLYRVSPEESVHIQNLLGSDIQMQLDECLALPAEDKELKRAM 163 (378)
Q Consensus 85 ~~~~~ilTDSGgfQv~sl~-~~~~~~~~Gv~f~s~~dG~~~~ltpe~~i~~q~~lg~DI~~~LD~~~~~~~~~k~~~~sv 163 (378)
T Consensus 81 ~~~~~~~~d~gg~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~p~~~~~~~~~~g~d~~~~~d~~~~~~~~~~~~~~~~ 160 (375)
T TIGR00449 81 NWDGPILTDSGGFQVFSLGFDLRKIEEEGVHFKSPLDGSKLFLTPEKSLEIQYALGSDIILPLDECTPPPADYDYAEESL 160 (375)
T ss_pred HCCCCEEECCCCCEEEEECCHHHHHCCCCCEECCCCCCCEEEECHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHH
T ss_conf 20332011466513332110111100024111054576402205035567566505410110002567763067788888
Q ss_pred HHHHHHHHHHHHHHCCC-CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCC-CCCCCH--HHHHHHHHHHHHCCC
Q ss_conf 98899999998851358-88605540234443668999988764222346766413-567516--789989998985077
Q gi|254780178|r 164 ELSLRWAERSLVAFGNQ-PGKALFGIVQGGDNINLRSFSAERLKELDLKGYAIGGL-AVGEPQ--EVMLHILSNVLPILP 239 (378)
Q Consensus 164 ~rT~~w~~~~~~~~~~~-~~~~lfgiVqGG~~~dLR~~Sa~~l~~~~~~G~aIgGl-~~ge~~--~~~~~ii~~~~~~LP 239 (378)
T Consensus 161 ~~~~~w~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~gg~~~~g~~~~~~~~~~~~~~~~~~~p 240 (375)
T TIGR00449 161 ERTLRWAEESLEYHKRRGGENLLFGIVQGGTYPDLRKLSAKGLLELGFPGYAIGGLVSLGEPKRFEDLLRVLEHTAPLLP 240 (375)
T ss_pred HHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHCC
T ss_conf 88888888888864135744213443236402567777665555337764222310001331468899999987754146
Q ss_pred HHHHEECCCCHHHHHHHHHHHCCCCEEEECCEEECCCCCCCCCC-CCCHHHHHHHHCCCCCCCCCCCCCHHHCCCCHHHH
Q ss_conf 03310025410189999998538983662000002332002456-21002101232236885598669813368898999
Q gi|254780178|r 240 VERPHYLMGVGTPDDILKSVSYGVDMFDCVMPTRAGRHGLAFTR-FGKINLRNARHIDDMRPLDAESHCSALRDYSRAYL 318 (378)
Q Consensus 240 ~~kPr~l~G~G~P~~i~~~v~~GvDlFD~~~ptr~Ar~G~~~t~-~g~i~l~~~~~~~d~~pi~~~C~C~~C~~ytraYl 318 (378)
T Consensus 241 ~~~p~~~~g~g~p~~~~~~~~~g~d~~d~~~p~~~~~~~~~~~~p~g~~~~~~~~~~~d~~p~~~~c~c~~c~~~~~~~~ 320 (375)
T TIGR00449 241 KDKPRYLLGVGTPEDLLDAVSLGVDLFDCVAPTRYARNGTLLTTPEGRLKLKNAKYKDDTRPLDEPCDCYTCKNYSRAYL 320 (375)
T ss_pred CCCCCCEEECCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCEEECCCCCEEECCCCCCCCCCCCCCCCCCHHHCCCCHHHH
T ss_conf 42452012057488998888732204555555542147704544643112021100113555554432011113557888
Q ss_pred HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHC
Q ss_conf 8868578508999999999999999999999999859989999999998532
Q gi|254780178|r 319 HHLLRVNESLAGMILSWANLAYYQDLMKEIRSAIAEDCFVDFAMQTQENWKK 370 (378)
Q Consensus 319 ~HL~~~~E~l~~~Ll~iHNl~~~~~~~~~iR~aI~~g~f~~~~~~~~~~~~~ 370 (378)
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (375)
T TIGR00449 321 RHLDRANELLGARLASEHNLHFLLRLLEKIRQAILEGRLLSFVEEFLEKYGR 372 (375)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCC
T ss_conf 7776533444445444445788999999998876314046789999974246