HHsearch alignment for GI: 254780178 and conserved domain: TIGR01108
>TIGR01108 oadA oxaloacetate decarboxylase alpha subunit; InterPro: IPR005776 This family describes the bacterial oxaloacetate decarboxylase alpha subunit and its equivalents in archaea . The oxaloacetate decarboxylase Na+ pump is the paradigm of the family of Na+ transport decarboxylases that present in bacteria and archaea. It a multi subunit enzyme consisting of a peripheral alpha-subunit and integral membrane subunits beta and gamma. The energy released by the decarboxylation reaction of oxaloacetate is coupled to Na+ ion pumping across the membrane.; GO: 0008948 oxaloacetate decarboxylase activity, 0006814 sodium ion transport.
Probab=95.57 E-value=0.09 Score=32.02 Aligned_cols=218 Identities=18% Similarity=0.187 Sum_probs=121.5
Q ss_pred EEEECCCCCCEEEECHHHHHHHHHHCCCCEEEEEHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEE-ECCC
Q ss_conf 021014454158712999999987328977996012133221158999999988999999988513588860554-0234
Q gi|254780178|r 113 VRFRSHIDGSLYRVSPEESVHIQNLLGSDIQMQLDECLALPAEDKELKRAMELSLRWAERSLVAFGNQPGKALFG-IVQG 191 (378)
Q Consensus 113 v~f~s~~dG~~~~ltpe~~i~~q~~lg~DI~~~LD~~~~~~~~~k~~~~sv~rT~~w~~~~~~~~~~~~~~~lfg-iVqG 191 (378)
T Consensus 83 lGYRHYADDV-----Ve~FV~~a~~NG~DVFRiFDA---LND~RN------------l~~ai~a~Kk~g-----~dHvQg 137 (616)
T TIGR01108 83 LGYRHYADDV-----VEAFVKKAVENGLDVFRIFDA---LNDPRN------------LQKAIEAAKKHG-----ADHVQG 137 (616)
T ss_pred CCCCCCCHHH-----HHHHHHHHHHCCCEEEEEECC---CCCHHH------------HHHHHHHHHHHC-----CCEEEE
T ss_conf 3441584368-----999999999759808995124---588778------------999999999738-----978999
Q ss_pred CCC--------HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHEECCCC----HHHHHHHHHH
Q ss_conf 443--------6689999887642223467664135675167899899989850770331002541----0189999998
Q gi|254780178|r 192 GDN--------INLRSFSAERLKELDLKGYAIGGLAVGEPQEVMLHILSNVLPILPVERPHYLMGV----GTPDDILKSV 259 (378)
Q Consensus 192 G~~--------~dLR~~Sa~~l~~~~~~G~aIgGl~~ge~~~~~~~ii~~~~~~LP~~kPr~l~G~----G~P~~i~~~v 259 (378)
T Consensus 138 ~iSYTtSPvHTl~~yl~la~~L~~~G~DSI~IKDMaGlLTP~~AYELV~alK~~~~-n~pvhLH~H~TtGmA~~AllkA~ 216 (616)
T TIGR01108 138 AISYTTSPVHTLEKYLELAKELLEMGVDSICIKDMAGLLTPKVAYELVSALKKEFG-NLPVHLHSHATTGMAEMALLKAI 216 (616)
T ss_pred EEECCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHCC-CEEEEEECCCCHHHHHHHHHHHH
T ss_conf 97124684367888999999999818860552020046441589999999974239-74688632472337999999888
Q ss_pred HCCCCEEEECCEEECCCCCCC--------CCCCCC---HHHH------------HHHHCCCCCCCCCCCCCHHHCCCCHH
Q ss_conf 538983662000002332002--------456210---0210------------12322368855986698133688989
Q gi|254780178|r 260 SYGVDMFDCVMPTRAGRHGLA--------FTRFGK---INLR------------NARHIDDMRPLDAESHCSALRDYSRA 316 (378)
Q Consensus 260 ~~GvDlFD~~~ptr~Ar~G~~--------~t~~g~---i~l~------------~~~~~~d~~pi~~~C~C~~C~~ytra 316 (378)
T Consensus 217 EAG~d~iDTAisS~S~gtSHPptE~lv~~L~~~gyD~gld~~~L~~i~~YFr~VRkKY~~fle~~~~~~D-------~R- 288 (616)
T TIGR01108 217 EAGADMIDTAISSMSGGTSHPPTETLVAALRGTGYDTGLDIELLLEIADYFRKVRKKYSQFLESQLKGPD-------SR- 288 (616)
T ss_pred HCCCCCCHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC-------CE-
T ss_conf 7078800200552347888874799999970578743102799999999999999999886076777888-------44-
Q ss_pred HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf 99886857850899999999999999999999999985998999999999853279986659
Q gi|254780178|r 317 YLHHLLRVNESLAGMILSWANLAYYQDLMKEIRSAIAEDCFVDFAMQTQENWKKGDIPPIFT 378 (378)
Q Consensus 317 Yl~HL~~~~E~l~~~Ll~iHNl~~~~~~~~~iR~aI~~g~f~~~~~~~~~~~~~~~~~~~~~ 378 (378)
T Consensus 289 ---iLv~Qv--PGG---------M~SNL~~QLkEQna~DkLd~VL~EiPrVreDLGYpPLVT 336 (616)
T TIGR01108 289 ---ILVSQV--PGG---------MLSNLESQLKEQNALDKLDEVLEEIPRVREDLGYPPLVT 336 (616)
T ss_pred ---EEEEEC--CCH---------HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCC
T ss_conf ---899736--880---------688999999862375578888741574123267656977