HHsearch alignment of GI: 254780178 and MMDB domain: 1iq8_A_1-358
>1iq8_A (A:1-358) Archaeosine tRNA-guanine transglycosylase; (alpha/beta)8 barrel, riken structural genomics/proteomics initiative, RSGI; 2.20A {Pyrococcus horikoshii}
Probab=100.00 E-value=0 Score=672.32 Aligned_cols=335 Identities=24% Similarity=0.345 Sum_probs=320.0
Q ss_pred CCCCCEEEEEEECCCCEEEEEEECCEEEECCCEEECCCCCCCCCCCHHHHHHCCCCEEEEEHHHHHHCCCHHHHHHCCCC
Q ss_conf 98870499997649932799987887540585741068685688688999860998999322665738768998652742
Q gi|254780178|r 1 MDKNFHFNLKAVSGSARLGEIITPRGVIKTPAFMPVGTAGTVKAMYFDQVRDLGADVILGNAYHLMLRPGAERIARLGGL 80 (378)
Q Consensus 1 m~~~~~F~i~~~~~~aR~G~L~t~~g~i~TP~flpv~t~g~v~~lt~~~l~~~g~~~il~Ntyhl~~~pg~~~i~~~gGl 80 (378)
|++||+|+|.+++++||+|+|.++||+|+||+||||+++|+++ ++|+++++++++++++|+||++++|+.+.+++.+||
T Consensus 4 ~~~~m~F~v~~~~~~aR~G~L~~~~~~i~TP~fip~t~~g~~~-lt~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl 82 (358)
T 1iq8_A 4 GDKMLKFEIKARDGAGRIGKLEVNGKKIETPAIMPVVNPKQMV-VEPKELEKMGFEIIITNSYIIYKDEELRRKALELGI 82 (358)
T ss_dssp --CCEEEEEEEEETTEEEEEEEETTEEEEESEEEEBCCSSSCS-SCHHHHHHTTCCEEEEEHHHHHHCHHHHHHHHHHHH
T ss_pred CCCCEEEEEEECCCCCCEEEEEECCCEEECCCEEEEECCCEEE-ECHHHHHHHCCCEEEEEHHHCCCCCCHHHHHHCCCH
T ss_conf 7861699998643862438998199236189463444385403-479999983899997102224658646665640887
Q ss_pred HHHCCCCCCEEECCCCCCCCHHHHCCCCCCCCEEEECCCCCCEEEECHHHHHHHHHHCCCCEEEEEHHHCCCCCCHHHHH
Q ss_conf 01101577224114543210122102233331021014454158712999999987328977996012133221158999
Q gi|254780178|r 81 HKFIRWFKPILTDSGGFQVMSLSKLCSIDEQGVRFRSHIDGSLYRVSPEESVHIQNLLGSDIQMQLDECLALPAEDKELK 160 (378)
Q Consensus 81 h~fl~~~~~ilTDSGgfQv~sl~~~~~~~~~Gv~f~s~~dG~~~~ltpe~~i~~q~~lg~DI~~~LD~~~~~~~~~k~~~ 160 (378)
|+|++|+++++||||+||++|+|.. .+|||+++++|+.+||||+++||+++++++++|+++
T Consensus 83 ~~f~~~~~~iltdSg~~~~~s~G~~-------------------~lt~e~~~~~~~~~~pDi~v~ldd~~~~~~~~k~~~ 143 (358)
T 1iq8_A 83 HRMLDYNGIIEVDSGSFQLMKYGSI-------------------EVSNREIIEFQHRIGVDIGTFLDIPTPPDAPREQAV 143 (358)
T ss_dssp HHHHTCCSEEEEECSTTHHHHSSCC-------------------SSCHHHHHHHHHHTTCSBBCCCCCCCCTTCCHHHHH
T ss_pred HHHCCCCCCEECCCCHHHHEECCCC-------------------CCCCHHHEEEHHHCCCCCEEECCCCCCCCCCHHHHH
T ss_conf 8870899973616754776166554-------------------668543266520268760677667789997799999
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH---HHHHHHHHHHC
Q ss_conf 999988999999988513588860554023444366899998876422234676641356751678---99899989850
Q gi|254780178|r 161 RAMELSLRWAERSLVAFGNQPGKALFGIVQGGDNINLRSFSAERLKELDLKGYAIGGLAVGEPQEV---MLHILSNVLPI 237 (378)
Q Consensus 161 ~sv~rT~~w~~~~~~~~~~~~~~~lfgiVqGG~~~dLR~~Sa~~l~~~~~~G~aIgGl~~ge~~~~---~~~ii~~~~~~ 237 (378)
++|+||.+|+++|+..+ .+++||+||||.+.|+|++|++++.+.+++||+++|++.+++.++ +.+++.++++.
T Consensus 144 k~v~rT~~w~~~~~~~~----~~~~~~~i~Gg~~~~lr~~s~~~~~~~~~~~~~i~g~~~~~~~~~~~~ll~~i~~~~~~ 219 (358)
T 1iq8_A 144 KELEITLSRAREAEEIK----EIPMNATIQGSTYTDLRRYAARRLSSMNFEIHPIGGVVPLLESYRFRDVVDIVISSKMA 219 (358)
T ss_dssp HHHHHHHHHHHHHHHHC----CSCBBCCBCCTTCHHHHHHHHHHHHHSCCSBEEECSCHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH----CCCCCCEECCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCC
T ss_conf 99999999999876510----04544233266655799999998751899777755656554257899999998751135
Q ss_pred CCHHHHEECCCCHHHHHHHHHHHCCCCEEEECCEEECCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHCCCCHHH
Q ss_conf 77033100254101899999985389836620000023320024562100210123223688559866981336889899
Q gi|254780178|r 238 LPVERPHYLMGVGTPDDILKSVSYGVDMFDCVMPTRAGRHGLAFTRFGKINLRNARHIDDMRPLDAESHCSALRDYSRAY 317 (378)
Q Consensus 238 LP~~kPr~l~G~G~P~~i~~~v~~GvDlFD~~~ptr~Ar~G~~~t~~g~i~l~~~~~~~d~~pi~~~C~C~~C~~ytraY 317 (378)
||++||||++|+|+|++|+.+|++|||+|||++|++.|++|+|+|++|.+||++.+|. +|+||+|++|||||
T Consensus 220 lp~~kp~~l~g~g~P~~i~~~v~lGvD~fDs~~~~~~a~~G~~l~~~~~i~l~~~~~~--------~C~C~~C~~~tray 291 (358)
T 1iq8_A 220 LRPDRPVHLFGAGHPIVFALAVAMGVDLFDSASYALYAKDDRYMTPEGTKRLDELDYF--------PCSCPVCSKYTPQE 291 (358)
T ss_dssp SCTTSCEEETTCCCGGGHHHHHHTTCCEEEESHHHHHHHTTEEEETTEEEEGGGCSSC--------CCCSTTTTTCCHHH
T ss_pred CCCCCCHHHCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHCCCEECCCCCCCCCCCCCC--------CCCCHHHCCCCHHH
T ss_conf 8765540004778667788998328873033117788616823678886215346789--------99981213058999
Q ss_pred HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHC
Q ss_conf 98868578508999999999999999999999999859989999999998532
Q gi|254780178|r 318 LHHLLRVNESLAGMILSWANLAYYQDLMKEIRSAIAEDCFVDFAMQTQENWKK 370 (378)
Q Consensus 318 l~HL~~~~E~l~~~Ll~iHNl~~~~~~~~~iR~aI~~g~f~~~~~~~~~~~~~ 370 (378)
||||++++|+ +||++||+++|.+|+++||+||++|+|++|+++|.+.|+.
T Consensus 292 ihhL~~~~e~---~ll~~HNl~~~~~~~~~iR~~i~~~~~~~~~~~~~~~~~~ 341 (358)
T 1iq8_A 292 LREMPKEERT---RLLALHNLWVIKEEIKRVKQAIKEGELWRLVDERARSHPK 341 (358)
T ss_dssp HTTSCHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHTTCHH
T ss_pred HHHHHHCCCC---CHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCHH
T ss_conf 9987536740---0899999999999999999999869999999999876989