HHsearch results for GI: 254780178 and protein with PDBid: 2ash_A
>2ash_A Queuine tRNA-ribosyltransferase; TM1561, tRNA-guanine, structural genomics, joint center for structural genomics, JCSG; 1.90A {Thermotoga maritima}
Probab=100.00 E-value=0 Score=899.15 Aligned_cols=370 Identities=43% Similarity=0.746 Sum_probs=363.3
Q ss_pred CCCEEEEEEECCCCEEEEEEECCEEEECCCEEECCCCCCCCCCCHHHHHHCCCCEEEEEHHHHHHCCCHHHHHHCCCCHH
Q ss_conf 87049999764993279998788754058574106868568868899986099899932266573876899865274201
Q gi|254780178|r 3 KNFHFNLKAVSGSARLGEIITPRGVIKTPAFMPVGTAGTVKAMYFDQVRDLGADVILGNAYHLMLRPGAERIARLGGLHK 82 (378)
Q Consensus 3 ~~~~F~i~~~~~~aR~G~L~t~~g~i~TP~flpv~t~g~v~~lt~~~l~~~g~~~il~Ntyhl~~~pg~~~i~~~gGlh~ 82 (378)
..|+|+|++++++||+|+|.|+||+|+||+||||+|+|+||+|+||+|+++|++++++||||++++||.+++++.||||+
T Consensus 11 ~~m~F~i~~~~~~AR~G~L~~~~g~i~TP~fmpv~t~g~v~~ltpd~l~~~g~~~il~Ntyhl~~~pg~~~~~~~gGlh~ 90 (381)
T 2ash_A 11 HHMEFEVKKTFGKARLGVMKLHHGAVETPVFMPVGTNASVKLLTPRDLEEAGAEIILSNTFHLMLKPGVEIIKLHRGLHN 90 (381)
T ss_dssp --CEEEEEEEETTEEEEEEEETTEEEEESEEEEEESSSSCTTCCHHHHHHHTCSCEEECCHHHHHTTCHHHHHHTTSHHH
T ss_pred CCEEEEEEEEECCEEEEEEEECCEEEECCEEEEECCCCCCCCCCHHHHHHHCCCEEEECHHHHHHCCCHHHHHHHCCHHH
T ss_conf 51599998605872158999799776599577604778588469999997189889502466651886056676388555
Q ss_pred HCCCCCCEEECCCCCCCCHHHHCCCCCCCCEEEECCCCCCEEEECHHHHHHHHHHCCCCEEEEEHHHCCCCCCHHHHHHH
Q ss_conf 10157722411454321012210223333102101445415871299999998732897799601213322115899999
Q gi|254780178|r 83 FIRWFKPILTDSGGFQVMSLSKLCSIDEQGVRFRSHIDGSLYRVSPEESVHIQNLLGSDIQMQLDECLALPAEDKELKRA 162 (378)
Q Consensus 83 fl~~~~~ilTDSGgfQv~sl~~~~~~~~~Gv~f~s~~dG~~~~ltpe~~i~~q~~lg~DI~~~LD~~~~~~~~~k~~~~s 162 (378)
||+|++++||||||||++|+++. +++++||.|+|++||+++.+|||++|++|+.|||||+|+||+|++++++++++++|
T Consensus 91 f~~~~~~iltdSggfq~~sl~~~-~~~~~gv~f~s~~~g~~~~ltpe~~~~~q~~lg~DI~~~ld~~~~~~~~~~~~~~s 169 (381)
T 2ash_A 91 FMGWKRPILTDSGGFQVFSLPKI-RIDDEGVVFRSPIDGSKVFLNPEISMEVQIALGSDICMVFDHCPVPDADYEEVKEA 169 (381)
T ss_dssp HHTCCSCEEECCCHHHHHTSTTC-EECSSCEEEECTTTCCEEEECHHHHHHHHHHHTCSEEECCCCCCC--CCHHHHHHH
T ss_pred HHHCCCCEEECCCCCCCCCCCCC-CCCCCEEEEECCCCCCEEECCHHHHHHHHHHHCCCEEEECCCCCCCCCCHHHHHHH
T ss_conf 76447861213576654324776-53677159843678925766899999999970998899998579997678999999
Q ss_pred HHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHH
Q ss_conf 99889999999885135888605540234443668999988764222346766413567516789989998985077033
Q gi|254780178|r 163 MELSLRWAERSLVAFGNQPGKALFGIVQGGDNINLRSFSAERLKELDLKGYAIGGLAVGEPQEVMLHILSNVLPILPVER 242 (378)
Q Consensus 163 v~rT~~w~~~~~~~~~~~~~~~lfgiVqGG~~~dLR~~Sa~~l~~~~~~G~aIgGl~~ge~~~~~~~ii~~~~~~LP~~k 242 (378)
++||++|++||++++.+ ++|+||||||||.++|||++|++++.+++|+||+|||++++++++++.+++..+.+.||++|
T Consensus 170 ~~rT~rw~~~~~~~~~~-~~q~lfgiVqGG~~~dLR~~sa~~l~~~~~~G~aigGl~~~e~~~~~~~~v~~~~~~LP~~k 248 (381)
T 2ash_A 170 TERTYRWALRSKKAFKT-ENQALFGIVQGGIYPDLRRESALQLTSIGFDGYAIGGLSIGEERSLTLEMTEVTVEFLPEDK 248 (381)
T ss_dssp HHHHHHHHHHHHHHCCC-SSCEEEEEECCTTCHHHHHHHHHHHHTTCCSEEEECSCSSSSCHHHHHHHHHHHHTTSCTTS
T ss_pred HHHHHHHHHHHHHHCCC-CCCEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHCCCCCCCCC
T ss_conf 99999999865543046-61227754537678899999999986179887998765567651012233100355577540
Q ss_pred HEECCCCHHHHHHHHHHHCCCCEEEECCEEECCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHCCCCHHHHHHHH
Q ss_conf 10025410189999998538983662000002332002456210021012322368855986698133688989998868
Q gi|254780178|r 243 PHYLMGVGTPDDILKSVSYGVDMFDCVMPTRAGRHGLAFTRFGKINLRNARHIDDMRPLDAESHCSALRDYSRAYLHHLL 322 (378)
Q Consensus 243 Pr~l~G~G~P~~i~~~v~~GvDlFD~~~ptr~Ar~G~~~t~~g~i~l~~~~~~~d~~pi~~~C~C~~C~~ytraYl~HL~ 322 (378)
||||||+|+|++|+.+|++|||||||++|+|+||+|+|||.+|.+||++++|++|++||+++|+||||++|||||||||+
T Consensus 249 Pr~l~GvG~P~~il~~V~~GvD~FD~~~ptr~Ar~G~alt~~g~~~l~~~~~~~D~~Pl~~~C~C~tC~~~traYlhHL~ 328 (381)
T 2ash_A 249 PRYFMGGGSPELILELVDRGVDMFDSVFPTRIARHGTALTWNGKLNLKASYNKRSLEPVDERCGCYTCKNFTRSYIHHLF 328 (381)
T ss_dssp CEEECSCCCHHHHHHHHTTTCCEEEESHHHHHHHTTEEEETTEEEETTSGGGTTCCSCSCTTCCSHHHHHCCHHHHHHHH
T ss_pred EEECCCCCCHHHHHHHHHCCCCEEECCCCHHHHHCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHH
T ss_conf 15326899999999999749885430551034427845634785444441002478997989899143704999998674
Q ss_pred HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCC
Q ss_conf 5785089999999999999999999999998599899999999985327998
Q gi|254780178|r 323 RVNESLAGMILSWANLAYYQDLMKEIRSAIAEDCFVDFAMQTQENWKKGDIP 374 (378)
Q Consensus 323 ~~~E~l~~~Ll~iHNl~~~~~~~~~iR~aI~~g~f~~~~~~~~~~~~~~~~~ 374 (378)
+++||||++||++|||++|.+||++||+||++|+|++|+++|+++|++++++
T Consensus 329 ~~~E~l~~~LltiHNl~~~~~~~~~iR~aI~~g~f~~~~~~f~~~y~~~~~~ 380 (381)
T 2ash_A 329 DRGEVLGQILLTIHNINFMISLMKEVRRSIESGTFKELKSKVVEVYSSGGVN 380 (381)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHTC-----
T ss_pred HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCC
T ss_conf 1781789999999999999999999999998599999999999997528988