RPS-BLAST 2.2.22 [Sep-27-2009]

Database: pdb70 
           24,244 sequences; 5,693,230 total letters

Searching..................................................done

Query= gi|254780179|ref|YP_003064592.1| hypothetical protein
CLIBASIA_00310 [Candidatus Liberibacter asiaticus str. psy62]
         (75 letters)



>1n45_A Heme oxygenase 1, HO-1; alpha helices, heme-binding site,
           oxidoreductase; HET: HEM; 1.50A {Homo sapiens} SCOP:
           a.132.1.1 PDB: 1n3u_A* 1ozr_A* 1ozw_A* 1s13_A* 1s8c_A*
           1t5p_A* 1twn_A* 1twr_A* 3czy_A* 3hok_A* 3k4f_A* 1xjz_A*
           1xk3_A* 1xk2_A* 1ozl_A* 1oyk_A* 1oze_A* 1oyl_A* 1xk0_A*
           1xk1_A* ...
          Length = 233

 Score = 24.3 bits (52), Expect = 8.1
 Identities = 16/63 (25%), Positives = 25/63 (39%), Gaps = 3/63 (4%)

Query: 15  IDFNSNHLLSSLSYCHYGKRLSTQY---KTLRKGILIPVVFSILYFTISKSIFPLSHFKK 71
           +      LL + +Y  Y   LS      K  +K + +P     L F    +I   + FK+
Sbjct: 121 VGRTEPELLVAHAYTRYLGDLSGGQVLKKIAQKALDLPSSGEGLAFFTFPNIASATKFKQ 180

Query: 72  HYR 74
            YR
Sbjct: 181 LYR 183


  Database: pdb70
    Posted date:  Jan 26, 2011 11:21 AM
  Number of letters in database: 5,693,230
  Number of sequences in database:  24,244
  
Lambda     K      H
   0.327    0.140    0.417 

Gapped
Lambda     K      H
   0.267   0.0697    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24244
Number of Hits to DB: 646,393
Number of extensions: 22652
Number of successful extensions: 115
Number of sequences better than 10.0: 1
Number of HSP's gapped: 115
Number of HSP's successfully gapped: 10
Length of query: 75
Length of database: 5,693,230
Length adjustment: 44
Effective length of query: 31
Effective length of database: 4,626,494
Effective search space: 143421314
Effective search space used: 143421314
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 50 (23.1 bits)