HHsearch alignment of GI: 254780180 and MMDB domain: 1yy3_A_68-170
>1yy3_A (A:68-170) S-adenosylmethionine:tRNA ribosyltransferase- isomerase; beta-barrel, QUEA, quein queuosine, tRNA- modification; 2.88A {Bacillus subtilis}
Probab=99.90 E-value=1.3e-23 Score=190.25 Aligned_cols=103 Identities=28% Similarity=0.503 Sum_probs=92.1
Q ss_pred EEEEEEEEEECCCCCCCCEEEEEEECCCCCCCHHHHHHCCCCCCCCCEEEECCCCCCCCEEEEEEECCCCCCEEEEECCC
Q ss_conf 88899876404677776505899811248661011221156436985799705788740699996035577249997267
Q gi|254780180|r 67 ITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQSRLEATVIDKWNTGEILLVFSIS 146 (360)
Q Consensus 67 ipARL~g~k~~~~~~~g~~ieill~~~~~~~~w~~l~kp~kklk~G~~l~~~~~~~~~~l~~~vi~~~~~g~~~i~f~~~ 146 (360)
|||||+|.|. ++|++||++++++++++.|.||+||+||+|+|++|.|.+. .+.++|+++.+.|.++++|+.+
T Consensus 1 ipARL~g~k~----~tG~~iEilll~~l~~~~w~~lvrp~kklk~G~~l~~~~~----~l~a~v~~~~~~g~~~~~f~~~ 72 (103)
T 1yy3_A 1 LPARLFGTKE----DTGAKVELLLLKQETGDKWETLAKPAKRVKKGTVVTFGDG----RLKAICTEELEHGGRKMEFQYD 72 (103)
T ss_dssp CCEEEEEEES----SSSCCEEEEEEEECSTTEEEEEETTGGGSCTTCEEEETTS----SSEEEEEEECTTSCEEEEEECS
T ss_pred EEEEEEEEEC----CCCCEEEEEEEECCCCCEEEEEEECCCCCCCCEEEEECCC----CEEEEEEEEECCCCEEEEECCC
T ss_conf 8568997734----7884689987402468658999604555553129995377----2489999981588379997378
Q ss_pred CCCHHHHHHHHHCCCCCHHHCCCCCCCCCCHHHHCC
Q ss_conf 863000254420357852221234565211433101
Q gi|254780180|r 147 GIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182 (360)
Q Consensus 147 ~~~~~~~L~~~G~iPLPPYI~r~r~~~~~D~~~YQT 182 (360)
+ ++.++|+++|+|||||||+| + ++|.+||||
T Consensus 73 ~-~~~~~l~~~G~iPLPPYI~R--~--~~D~erYQT 103 (103)
T 1yy3_A 73 G-IFYEVLESLGEMPLPPYIKE--Q--LDDKERYQT 103 (103)
T ss_dssp S-CHHHHHHHHHTCCCCHHHHT--T--SSSCC----
T ss_pred C-CHHHHHHHCCCCCCCCCCCC--C--CCHHHHHHH
T ss_conf 8-47999997189999933155--6--114999999