HHsearch results for GI: 254780180 and protein with PDBid: 1wdi_A
>1wdi_A Hypothetical protein TT0907; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; HET: CIT; 2.10A {Thermus thermophilus} SCOP: e.53.1.1
Probab=100.00 E-value=0 Score=1021.10 Aligned_cols=341 Identities=44% Similarity=0.676 Sum_probs=319.1
Q ss_pred CCCCCCCCCCCHHHHCCCCCCCCCCCEEEEECCCCCCCCEEEEEEHHHHHHHCCCCCEEEEECCCEEEEEEEEEEECCCC
Q ss_conf 98633588889778616998781203135663788875315310143478726988799994795688899876404677
Q gi|254780180|r 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTKVITAQLNGVRFCHIN 80 (360)
Q Consensus 1 M~lsdfDy~LP~elIAq~P~~~Rd~SRLLV~~r~~~~~~~i~h~~F~dl~~~L~~gDLLV~NnTKVipARL~g~k~~~~~ 80 (360)
|.||||||+||++||||+|+++||+|||||++++++. +|+|+.|+||++||+||||||||||||+||||+|+|
T Consensus 2 ~~L~~fdy~LP~elIAq~P~~~Rd~sRLLV~~r~~~~--~i~h~~F~dl~~~L~~gDlLV~NdTkVipARL~g~k----- 74 (345)
T 1wdi_A 2 EGLEAYDYHLPPEQIAQEGVEPRDMARLMVVYREGPF--RVAHKRVRDLPEFLRPGDVLVFNESKVIPARLLARK----- 74 (345)
T ss_dssp CGGGGGCCCCCGGGBCSSCCSSGGGSEEEEECSSSSC--CEEEEEGGGHHHHCCTTCEEEEEEEEECCEEEEEEC-----
T ss_pred CCHHHCCCCCCHHHHCCCCCCCCCCCEEEEEECCCCC--EEEECCHHHHHHHCCCCCEEEEECCEEEEEEEEEEC-----
T ss_conf 9655669998948966899999621238999889998--575331634675479998999989989788999771-----
Q ss_pred CCCCEEEEEEECCCCCCCHHHHHHCCCCCCCCCEEEECCCCCCC---CEEEEEEECCCCCCEEEEECCCCCCHHHHHHHH
Q ss_conf 77650589981124866101122115643698579970578874---069999603557724999726786300025442
Q gi|254780180|r 81 RREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQS---RLEATVIDKWNTGEILLVFSISGIELERQISLV 157 (360)
Q Consensus 81 ~~g~~ieill~~~~~~~~w~~l~kp~kklk~G~~l~~~~~~~~~---~l~~~vi~~~~~g~~~i~f~~~~~~~~~~L~~~ 157 (360)
.+|++||+++++..+++.|.|++||+||+++|+++.+.+..... .+.+++++..+.+.++++|+. ++.++|+++
T Consensus 75 ~tgg~vEilll~~~~~~~w~al~k~~kk~k~G~~l~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~---~~~~~l~~~ 151 (345)
T 1wdi_A 75 PTGGKVEILLVRERSPGLWEALLGPARKAPPGTRLLLLSPKDLAPVPGLQAEVVAVEEDGVRLLRFQG---DLVAHLEEV 151 (345)
T ss_dssp TTSCEEEEEECBCC------CCBCCCSCCCSCEEEEECTTTTSCEEEEEEEECCCSSCC-------------CCEEESCC
T ss_pred CCCCCEEEEEEECCCCCCEEEEECCCCCCCCCCEEEECCCCCCEECCCCEEEEEEEECCCCEEEEEHH---HHHHHHHHC
T ss_conf 78970799986325787304530355678989889954874200005726999998068727986103---689999975
Q ss_pred HCCCCCHHHCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCC
Q ss_conf 03578522212345652114331013456757400555688789999999997215530378731656657887410135
Q gi|254780180|r 158 GTIPLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237 (360)
Q Consensus 158 G~iPLPPYI~r~r~~~~~D~~~YQTVyA~~~GSVAAPTAGLHFt~~ll~~L~~kGi~~~~iTLHVG~GTF~Pi~~~~i~~ 237 (360)
|+|||||||+|+ .|.+|||||||+++|||||||||||||++||++|++|||++++||||||+|||+||+ +++.+
T Consensus 152 G~~PLPPYI~r~-----~d~~rYQTVyAk~~GSVAAPTAGLHFt~~ll~~l~~kgi~~~~iTLHVG~GTF~PV~-~~i~~ 225 (345)
T 1wdi_A 152 GEVPLPPYIKAK-----IPMERYQTVYARRPGSVAAPTAGLHFTPELLERLREMGVELRFLTLHVGPGTFRPVK-GDPEK 225 (345)
T ss_dssp CSCC------------------------------CCCCGGGGCCHHHHHHHHHTTCEEEEEEEEESGGGCCC--------
T ss_pred CCCCCCHHHHCC-----CHHHHHHHHHCCCCCCEECCCCCCCCCHHHHHHHHHCCCEEEEEEEECCCCCCCCCC-CCCCC
T ss_conf 998888677223-----257663246406898550676878779999999998698089999963677504544-54346
Q ss_pred CCCCCHHEEECHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCEEEEEEEECCCCCH
Q ss_conf 66770007785999999998753798099962878998999985289846888722366574096114312552775545
Q gi|254780180|r 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPK 317 (360)
Q Consensus 238 h~mH~E~~~i~~~~~~~I~~ak~~g~rIiAVGTT~~R~LEs~~~~~~~~~~~~g~T~lfI~Pg~~f~~vd~LiTNFH~P~ 317 (360)
|+||+|||+||++|+++||+||++|+|||||||||||||||++..+|.+++++|||||||+|||+|++||+||||||+||
T Consensus 226 H~mH~E~~~I~~~t~~~I~~ak~~g~rIiAVGTT~~RaLEs~~~~~~~~~~~~g~T~lfI~Pgy~f~vvd~LlTNFHlPk 305 (345)
T 1wdi_A 226 HEMHAEPYAIPEEVAEAVNRAKAEGRRVVAVGTTVVRALESAYREGVGVVAGEGETRLFIRPPYTFKVVDALFTNFHLPR 305 (345)
T ss_dssp --CCCEEEEECHHHHHHHHHHHHTTCCEEEESHHHHHHHHHTEETTTEECCEEEEECCCCCSSCCCSSCSEEEEECCCTT
T ss_pred CCCCCEEEEECHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHCCCCCCCCCCEECEEECCCCCCCEECEEEECCCCCC
T ss_conf 78765389966999999999997499299992408999999996189604678605859639898758176344573784
Q ss_pred HHHHHHHHHHHCHHHHHHHHHHHHHCCCEEECCCCHHHCC
Q ss_conf 7899999987198999999999998698261101022233
Q gi|254780180|r 318 STLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357 (360)
Q Consensus 318 Stll~Lv~Af~G~~~~~~~Y~~Ai~~~yrF~syGDamLi~ 357 (360)
||||||||||+|+++|+++|++||+++||||||||||||+
T Consensus 306 STLl~LvsAf~G~~~~~~~Y~~Ai~~~YrF~SyGDamlil 345 (345)
T 1wdi_A 306 STLLMLVAAFLGRERTLEAYRLAVAEGYRFYSLGDAMLIL 345 (345)
T ss_dssp CHHHHHHHHHHCHHHHHHHHHHHHHTTCCBSTTSCEEEEC
T ss_pred CHHHHHHHHHCCHHHHHHHHHHHHHCCCCEECCCHHHEEC
T ss_conf 5899999995898999999999998698344412431109